Query psy7827
Match_columns 140
No_of_seqs 238 out of 1698
Neff 9.0
Searched_HMMs 29240
Date Fri Aug 16 19:54:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7827.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7827hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pbf_A Protein-L-isoaspartate 99.8 1.5E-19 5E-24 128.7 12.4 129 5-138 12-146 (227)
2 1r18_A Protein-L-isoaspartate( 99.8 1.2E-19 4.2E-24 129.4 9.5 116 6-126 17-138 (227)
3 3lbf_A Protein-L-isoaspartate 99.8 3E-19 1E-23 125.6 11.2 126 3-139 5-132 (210)
4 2yxe_A Protein-L-isoaspartate 99.8 8.4E-19 2.9E-23 123.7 11.4 119 4-127 6-127 (215)
5 1i1n_A Protein-L-isoaspartate 99.8 2.4E-18 8.3E-23 122.3 11.0 115 7-126 11-126 (226)
6 1jg1_A PIMT;, protein-L-isoasp 99.8 5.9E-18 2E-22 121.3 11.9 124 5-138 21-146 (235)
7 1dl5_A Protein-L-isoaspartate 99.7 1.2E-17 4E-22 124.9 10.8 124 5-138 2-132 (317)
8 1vbf_A 231AA long hypothetical 99.7 1.9E-17 6.4E-22 118.0 7.7 110 4-125 2-115 (231)
9 4gek_A TRNA (CMO5U34)-methyltr 99.5 1.7E-13 5.9E-18 100.0 9.9 74 63-139 55-130 (261)
10 3njr_A Precorrin-6Y methylase; 99.4 6.1E-12 2.1E-16 88.4 10.7 74 58-139 37-111 (204)
11 3mti_A RRNA methylase; SAM-dep 99.4 3.2E-12 1.1E-16 87.8 8.7 66 66-138 10-76 (185)
12 3kr9_A SAM-dependent methyltra 99.4 2.4E-12 8.3E-17 92.1 8.0 61 75-139 12-73 (225)
13 3e05_A Precorrin-6Y C5,15-meth 99.3 9.7E-12 3.3E-16 86.8 10.8 73 60-139 24-97 (204)
14 3eey_A Putative rRNA methylase 99.3 8.5E-12 2.9E-16 86.5 10.1 61 76-139 20-81 (197)
15 3lec_A NADB-rossmann superfami 99.3 3.4E-12 1.2E-16 91.5 8.0 61 75-139 18-79 (230)
16 3gnl_A Uncharacterized protein 99.3 3.3E-12 1.1E-16 92.3 7.9 61 75-139 18-79 (244)
17 2b25_A Hypothetical protein; s 99.3 7.4E-12 2.5E-16 94.0 10.1 100 24-125 47-153 (336)
18 3u81_A Catechol O-methyltransf 99.3 6.6E-12 2.3E-16 88.9 8.5 73 62-139 44-117 (221)
19 3dr5_A Putative O-methyltransf 99.3 1.3E-11 4.4E-16 87.9 9.3 59 79-139 57-116 (221)
20 4df3_A Fibrillarin-like rRNA/T 99.3 8.3E-12 2.8E-16 89.7 8.4 51 75-125 74-125 (233)
21 3ntv_A MW1564 protein; rossman 99.3 1.3E-11 4.4E-16 88.2 9.3 74 60-139 55-129 (232)
22 3mb5_A SAM-dependent methyltra 99.3 2.6E-11 8.9E-16 87.2 11.0 75 60-139 77-152 (255)
23 3hm2_A Precorrin-6Y C5,15-meth 99.3 9.8E-12 3.3E-16 84.5 8.1 66 59-127 8-74 (178)
24 1nkv_A Hypothetical protein YJ 99.3 2.4E-11 8.2E-16 87.2 10.4 72 61-139 21-93 (256)
25 1nv8_A HEMK protein; class I a 99.3 2.3E-11 8E-16 89.6 10.2 87 46-139 90-180 (284)
26 2yxd_A Probable cobalt-precorr 99.3 4.2E-11 1.4E-15 81.4 10.7 71 60-139 19-90 (183)
27 3tr6_A O-methyltransferase; ce 99.3 1.9E-11 6.6E-16 86.3 9.0 73 62-139 50-123 (225)
28 3duw_A OMT, O-methyltransferas 99.3 1.9E-11 6.4E-16 86.4 8.8 73 62-139 44-117 (223)
29 2hnk_A SAM-dependent O-methylt 99.3 3E-11 1E-15 86.4 9.6 76 59-139 43-119 (239)
30 3dh0_A SAM dependent methyltra 99.3 2.9E-11 9.9E-16 84.9 9.3 67 66-138 27-94 (219)
31 1sui_A Caffeoyl-COA O-methyltr 99.3 2.5E-11 8.7E-16 87.7 9.0 74 61-139 64-138 (247)
32 3tfw_A Putative O-methyltransf 99.3 2.5E-11 8.5E-16 87.6 8.9 61 76-139 61-122 (248)
33 2gpy_A O-methyltransferase; st 99.2 5.5E-11 1.9E-15 84.6 10.0 75 59-139 37-112 (233)
34 3p9n_A Possible methyltransfer 99.2 6.9E-11 2.3E-15 81.6 10.1 73 61-139 26-100 (189)
35 3r3h_A O-methyltransferase, SA 99.2 6E-12 2.1E-16 90.7 4.9 73 62-139 46-119 (242)
36 3jwh_A HEN1; methyltransferase 99.2 4.2E-11 1.4E-15 84.2 9.1 75 62-139 15-91 (217)
37 3c3y_A Pfomt, O-methyltransfer 99.2 6.7E-11 2.3E-15 84.8 10.2 61 76-139 68-129 (237)
38 3hem_A Cyclopropane-fatty-acyl 99.2 4.1E-11 1.4E-15 88.4 9.3 67 66-139 62-129 (302)
39 1ws6_A Methyltransferase; stru 99.2 8E-11 2.7E-15 79.3 9.8 64 61-127 24-88 (171)
40 2h00_A Methyltransferase 10 do 99.2 8.7E-11 3E-15 84.6 10.5 58 78-139 65-123 (254)
41 1zq9_A Probable dimethyladenos 99.2 3.2E-11 1.1E-15 88.9 8.2 71 61-139 13-84 (285)
42 2fca_A TRNA (guanine-N(7)-)-me 99.2 3.7E-11 1.3E-15 84.8 8.2 58 77-139 37-95 (213)
43 3dxy_A TRNA (guanine-N(7)-)-me 99.2 4.2E-11 1.4E-15 85.1 8.3 58 77-139 33-91 (218)
44 3c3p_A Methyltransferase; NP_9 99.2 3.6E-11 1.2E-15 84.3 7.8 61 76-139 54-115 (210)
45 2avd_A Catechol-O-methyltransf 99.2 7E-11 2.4E-15 83.6 9.3 73 62-139 55-128 (229)
46 3bkx_A SAM-dependent methyltra 99.2 4.3E-11 1.5E-15 86.8 8.2 70 64-138 31-107 (275)
47 1i9g_A Hypothetical protein RV 99.2 1.3E-10 4.3E-15 84.7 10.5 68 56-125 79-147 (280)
48 3jwg_A HEN1, methyltransferase 99.2 6E-11 2.1E-15 83.4 8.5 75 62-139 15-91 (219)
49 1l3i_A Precorrin-6Y methyltran 99.2 1.6E-10 5.6E-15 78.9 10.4 72 60-139 17-89 (192)
50 3fpf_A Mtnas, putative unchara 99.2 1E-10 3.4E-15 86.7 9.5 63 70-139 116-179 (298)
51 3tqs_A Ribosomal RNA small sub 99.2 5E-11 1.7E-15 86.7 7.7 65 55-124 7-73 (255)
52 2fhp_A Methylase, putative; al 99.2 1.6E-10 5.4E-15 79.1 9.7 73 61-139 28-101 (187)
53 3uzu_A Ribosomal RNA small sub 99.2 9.8E-11 3.4E-15 86.2 9.2 60 60-121 26-87 (279)
54 3fzg_A 16S rRNA methylase; met 99.2 5.9E-11 2E-15 82.8 7.4 57 76-136 47-104 (200)
55 3cbg_A O-methyltransferase; cy 99.2 8.1E-11 2.8E-15 84.0 8.4 73 62-139 58-131 (232)
56 3evz_A Methyltransferase; NYSG 99.2 1.6E-10 5.5E-15 81.8 9.9 50 76-127 53-104 (230)
57 3gru_A Dimethyladenosine trans 99.2 7.7E-11 2.6E-15 87.4 8.6 74 55-139 28-103 (295)
58 1pjz_A Thiopurine S-methyltran 99.2 4.5E-11 1.5E-15 83.8 6.9 50 69-123 15-65 (203)
59 2esr_A Methyltransferase; stru 99.2 1.1E-10 3.7E-15 79.5 8.5 70 64-139 18-88 (177)
60 1m6y_A S-adenosyl-methyltransf 99.2 8E-11 2.7E-15 87.6 8.4 70 62-139 12-82 (301)
61 1xdz_A Methyltransferase GIDB; 99.2 8.3E-11 2.8E-15 84.2 8.2 58 77-139 69-127 (240)
62 1yzh_A TRNA (guanine-N(7)-)-me 99.2 9.1E-11 3.1E-15 82.5 8.3 58 77-139 40-98 (214)
63 3mq2_A 16S rRNA methyltransfer 99.2 7.5E-11 2.6E-15 83.0 7.7 67 66-139 17-88 (218)
64 3g89_A Ribosomal RNA small sub 99.2 7.3E-11 2.5E-15 85.4 7.8 58 77-139 79-137 (249)
65 2h1r_A Dimethyladenosine trans 99.2 4.5E-11 1.5E-15 88.7 6.7 69 54-127 19-89 (299)
66 2ift_A Putative methylase HI07 99.2 9.4E-11 3.2E-15 82.0 8.0 72 63-139 39-111 (201)
67 2fpo_A Methylase YHHF; structu 99.2 1.2E-10 4.1E-15 81.5 8.5 71 62-139 39-110 (202)
68 3kkz_A Uncharacterized protein 99.2 1E-10 3.5E-15 84.7 8.2 70 64-139 33-103 (267)
69 2pwy_A TRNA (adenine-N(1)-)-me 99.2 3.5E-10 1.2E-14 81.2 10.9 74 59-138 79-154 (258)
70 3tma_A Methyltransferase; thum 99.2 2.4E-10 8.3E-15 86.3 10.5 73 61-139 188-261 (354)
71 3bus_A REBM, methyltransferase 99.2 2E-10 6.8E-15 83.2 9.5 67 65-138 50-117 (273)
72 3fut_A Dimethyladenosine trans 99.2 1.8E-10 6.2E-15 84.5 9.4 57 61-123 32-89 (271)
73 3dlc_A Putative S-adenosyl-L-m 99.2 1.4E-10 4.7E-15 81.0 8.4 68 63-138 31-99 (219)
74 3f4k_A Putative methyltransfer 99.2 1.6E-10 5.4E-15 82.9 8.8 71 63-139 32-103 (257)
75 1o54_A SAM-dependent O-methylt 99.1 2.9E-10 9.9E-15 83.0 10.1 72 62-138 98-170 (277)
76 3g07_A 7SK snRNA methylphospha 99.1 4.6E-11 1.6E-15 88.1 5.9 50 76-126 44-94 (292)
77 2b3t_A Protein methyltransfera 99.1 3.4E-10 1.2E-14 82.6 10.5 58 77-139 108-166 (276)
78 1xxl_A YCGJ protein; structura 99.1 1.6E-10 5.5E-15 82.5 8.5 62 61-127 6-68 (239)
79 3gdh_A Trimethylguanosine synt 99.1 1.5E-10 5.1E-15 82.6 8.2 68 65-139 66-134 (241)
80 2bm8_A Cephalosporin hydroxyla 99.1 5E-11 1.7E-15 85.6 5.7 60 58-119 62-125 (236)
81 3iv6_A Putative Zn-dependent a 99.1 3.9E-11 1.3E-15 87.6 5.1 58 63-125 32-90 (261)
82 3grz_A L11 mtase, ribosomal pr 99.1 3.9E-10 1.3E-14 78.6 9.9 62 65-128 47-109 (205)
83 2gb4_A Thiopurine S-methyltran 99.1 2.2E-10 7.6E-15 83.1 8.9 57 61-122 53-110 (252)
84 3uwp_A Histone-lysine N-methyl 99.1 2.8E-10 9.7E-15 87.8 9.8 73 62-139 159-239 (438)
85 3g5t_A Trans-aconitate 3-methy 99.1 4.2E-10 1.4E-14 82.9 10.4 61 76-139 34-96 (299)
86 1jsx_A Glucose-inhibited divis 99.1 2.4E-10 8.1E-15 79.6 8.5 71 63-138 49-121 (207)
87 1kpg_A CFA synthase;, cyclopro 99.1 2.4E-10 8.1E-15 83.5 8.9 59 76-139 62-121 (287)
88 1vl5_A Unknown conserved prote 99.1 1.8E-10 6.3E-15 83.0 8.2 58 65-127 26-84 (260)
89 2o57_A Putative sarcosine dime 99.1 3.8E-10 1.3E-14 82.8 9.9 69 64-139 66-139 (297)
90 2frn_A Hypothetical protein PH 99.1 2.1E-10 7.2E-15 84.1 8.5 59 76-139 123-182 (278)
91 1nt2_A Fibrillarin-like PRE-rR 99.1 2.2E-10 7.7E-15 80.8 8.3 46 76-122 55-101 (210)
92 1qam_A ERMC' methyltransferase 99.1 1.8E-10 6.1E-15 83.1 7.9 59 61-124 15-74 (244)
93 4dzr_A Protein-(glutamine-N5) 99.1 7.7E-11 2.6E-15 82.0 5.7 62 63-127 16-79 (215)
94 2vdv_E TRNA (guanine-N(7)-)-me 99.1 1.9E-10 6.5E-15 82.7 7.8 49 76-125 47-96 (246)
95 3lpm_A Putative methyltransfer 99.1 1.7E-10 5.8E-15 83.5 7.4 59 76-139 46-106 (259)
96 2ozv_A Hypothetical protein AT 99.1 1.3E-10 4.4E-15 84.5 6.6 60 76-139 34-97 (260)
97 1u2z_A Histone-lysine N-methyl 99.1 8.1E-10 2.8E-14 85.8 11.5 115 12-138 171-307 (433)
98 2fk8_A Methoxy mycolic acid sy 99.1 2.7E-10 9.4E-15 84.5 8.5 59 76-139 88-147 (318)
99 1dus_A MJ0882; hypothetical pr 99.1 3.9E-10 1.3E-14 77.2 8.7 69 63-138 39-108 (194)
100 1yb2_A Hypothetical protein TA 99.1 2.4E-10 8.3E-15 83.4 8.1 66 67-138 101-168 (275)
101 1wy7_A Hypothetical protein PH 99.1 1.2E-09 4.2E-14 76.0 11.2 71 62-139 32-104 (207)
102 3g2m_A PCZA361.24; SAM-depende 99.1 5E-10 1.7E-14 82.4 9.7 59 62-126 69-128 (299)
103 1ixk_A Methyltransferase; open 99.1 4.8E-10 1.6E-14 83.7 9.7 66 67-138 109-175 (315)
104 3id6_C Fibrillarin-like rRNA/T 99.1 3.4E-10 1.2E-14 81.2 8.5 57 63-119 60-117 (232)
105 1qyr_A KSGA, high level kasuga 99.1 4.3E-10 1.5E-14 81.6 8.8 69 60-139 5-74 (252)
106 4hc4_A Protein arginine N-meth 99.1 1.8E-10 6.2E-15 88.0 7.1 58 76-139 81-139 (376)
107 1fbn_A MJ fibrillarin homologu 99.1 1.9E-10 6.6E-15 81.8 6.8 49 76-125 72-121 (230)
108 3p2e_A 16S rRNA methylase; met 99.1 2.2E-10 7.6E-15 81.6 7.0 58 76-138 22-84 (225)
109 4htf_A S-adenosylmethionine-de 99.1 1.2E-10 4E-15 85.1 5.5 57 77-139 67-124 (285)
110 3orh_A Guanidinoacetate N-meth 99.1 2.8E-10 9.5E-15 81.5 7.1 50 76-127 58-108 (236)
111 3a27_A TYW2, uncharacterized p 99.1 6.1E-10 2.1E-14 81.4 9.1 59 76-139 117-176 (272)
112 3ckk_A TRNA (guanine-N(7)-)-me 99.1 2.6E-10 8.8E-15 81.9 6.9 48 76-124 44-92 (235)
113 1uwv_A 23S rRNA (uracil-5-)-me 99.1 3.8E-10 1.3E-14 87.6 8.2 67 64-139 274-341 (433)
114 3vc1_A Geranyl diphosphate 2-C 99.1 5.2E-10 1.8E-14 82.9 8.6 59 76-139 115-174 (312)
115 1zx0_A Guanidinoacetate N-meth 99.1 3.7E-10 1.3E-14 80.5 7.6 57 76-139 58-115 (236)
116 3tm4_A TRNA (guanine N2-)-meth 99.1 8E-10 2.7E-14 84.2 9.8 72 61-139 203-275 (373)
117 2yvl_A TRMI protein, hypotheti 99.1 1.2E-09 4.2E-14 77.9 10.2 70 61-138 76-146 (248)
118 3ocj_A Putative exported prote 99.1 2E-10 7E-15 84.9 6.3 62 75-139 115-177 (305)
119 3gu3_A Methyltransferase; alph 99.1 4.6E-10 1.6E-14 82.2 8.0 64 62-126 7-71 (284)
120 1wzn_A SAM-dependent methyltra 99.1 6.6E-10 2.3E-14 79.5 8.3 48 77-127 40-88 (252)
121 4azs_A Methyltransferase WBDD; 99.1 4.9E-10 1.7E-14 89.7 8.4 58 75-139 63-121 (569)
122 3ajd_A Putative methyltransfer 99.0 5.6E-10 1.9E-14 81.7 8.0 66 68-139 75-141 (274)
123 2ipx_A RRNA 2'-O-methyltransfe 99.0 7.8E-10 2.7E-14 78.7 8.5 49 76-124 75-124 (233)
124 1g8a_A Fibrillarin-like PRE-rR 99.0 6.6E-10 2.3E-14 78.6 8.0 50 76-125 71-121 (227)
125 2xvm_A Tellurite resistance pr 99.0 7.7E-10 2.6E-14 76.2 8.2 56 67-127 23-79 (199)
126 1ve3_A Hypothetical protein PH 99.0 9.7E-10 3.3E-14 77.3 8.8 58 66-126 26-84 (227)
127 3k6r_A Putative transferase PH 99.0 5.1E-10 1.8E-14 82.3 7.3 59 76-139 123-182 (278)
128 2fyt_A Protein arginine N-meth 99.0 8.5E-10 2.9E-14 83.1 8.7 58 76-139 62-120 (340)
129 3ujc_A Phosphoethanolamine N-m 99.0 5.8E-10 2E-14 80.1 7.4 56 65-124 44-100 (266)
130 3ftd_A Dimethyladenosine trans 99.0 3.8E-10 1.3E-14 81.7 6.4 58 60-121 15-73 (249)
131 3ege_A Putative methyltransfer 99.0 9.3E-10 3.2E-14 79.6 8.1 57 61-122 19-76 (261)
132 3r0q_C Probable protein argini 99.0 6.9E-10 2.4E-14 84.7 7.7 58 76-139 61-119 (376)
133 3m70_A Tellurite resistance pr 99.0 1.1E-09 3.6E-14 80.1 8.3 57 66-127 110-167 (286)
134 4fsd_A Arsenic methyltransfera 99.0 1.2E-09 4.1E-14 83.4 8.6 50 76-125 81-131 (383)
135 2nxc_A L11 mtase, ribosomal pr 99.0 8.5E-10 2.9E-14 79.8 7.4 58 67-127 109-167 (254)
136 3mgg_A Methyltransferase; NYSG 99.0 1E-09 3.5E-14 79.6 7.8 58 76-138 35-93 (276)
137 3dtn_A Putative methyltransfer 99.0 1.4E-09 4.9E-14 77.0 8.4 58 66-125 33-91 (234)
138 3thr_A Glycine N-methyltransfe 99.0 5.6E-10 1.9E-14 81.7 6.4 56 62-122 43-99 (293)
139 4dcm_A Ribosomal RNA large sub 99.0 9.3E-10 3.2E-14 84.0 7.8 59 66-127 212-271 (375)
140 3htx_A HEN1; HEN1, small RNA m 99.0 1.3E-09 4.5E-14 90.0 9.0 74 64-139 709-785 (950)
141 4hg2_A Methyltransferase type 99.0 4.3E-10 1.5E-14 81.8 5.5 43 76-121 37-80 (257)
142 2y1w_A Histone-arginine methyl 99.0 1.8E-09 6E-14 81.6 9.0 67 65-139 39-106 (348)
143 3q7e_A Protein arginine N-meth 99.0 9.3E-10 3.2E-14 83.1 7.5 58 76-139 64-122 (349)
144 1g6q_1 HnRNP arginine N-methyl 99.0 1.5E-09 5E-14 81.4 8.5 66 66-139 28-94 (328)
145 3bt7_A TRNA (uracil-5-)-methyl 99.0 1.1E-09 3.9E-14 83.3 7.9 66 64-139 202-268 (369)
146 2igt_A SAM dependent methyltra 99.0 2.8E-09 9.6E-14 80.1 9.8 69 65-139 141-210 (332)
147 2b9e_A NOL1/NOP2/SUN domain fa 99.0 1.6E-09 5.5E-14 80.8 8.3 65 68-138 94-159 (309)
148 3ofk_A Nodulation protein S; N 99.0 7.9E-10 2.7E-14 77.4 6.2 46 76-124 49-95 (216)
149 3ggd_A SAM-dependent methyltra 99.0 2.6E-09 8.8E-14 76.2 8.9 45 75-122 53-98 (245)
150 2r6z_A UPF0341 protein in RSP 99.0 5.1E-10 1.8E-14 81.5 5.3 58 76-139 81-146 (258)
151 3sm3_A SAM-dependent methyltra 99.0 1.5E-09 5.2E-14 76.5 7.6 60 76-138 28-89 (235)
152 1y8c_A S-adenosylmethionine-de 99.0 1.6E-09 5.4E-14 76.9 7.7 62 62-126 21-83 (246)
153 1ri5_A MRNA capping enzyme; me 99.0 3.9E-09 1.3E-13 77.0 9.8 58 76-138 62-120 (298)
154 1yub_A Ermam, rRNA methyltrans 99.0 8.3E-11 2.8E-15 84.7 0.7 58 61-123 14-72 (245)
155 3m33_A Uncharacterized protein 99.0 1E-09 3.4E-14 77.8 6.4 43 76-121 46-89 (226)
156 3d2l_A SAM-dependent methyltra 99.0 2E-09 6.9E-14 76.3 7.8 47 76-126 31-78 (243)
157 2frx_A Hypothetical protein YE 99.0 3.4E-09 1.2E-13 83.3 9.7 64 69-138 108-174 (479)
158 2yqz_A Hypothetical protein TT 99.0 2.4E-09 8.3E-14 76.8 8.2 56 64-122 22-81 (263)
159 3pfg_A N-methyltransferase; N, 99.0 1.4E-09 4.8E-14 78.4 6.9 57 64-123 36-93 (263)
160 3b3j_A Histone-arginine methyl 99.0 2.7E-09 9.1E-14 83.9 8.9 58 76-139 156-214 (480)
161 3m4x_A NOL1/NOP2/SUN family pr 99.0 2.3E-09 7.9E-14 83.8 8.4 66 67-138 96-162 (456)
162 3lcc_A Putative methyl chlorid 98.9 7.7E-10 2.6E-14 78.6 5.2 55 78-138 66-121 (235)
163 3hnr_A Probable methyltransfer 98.9 1.6E-09 5.6E-14 75.9 6.8 53 66-123 35-88 (220)
164 1ne2_A Hypothetical protein TA 98.9 4.4E-09 1.5E-13 73.0 8.7 58 64-123 36-95 (200)
165 3m6w_A RRNA methylase; rRNA me 98.9 2.2E-09 7.6E-14 84.0 7.8 59 67-127 92-151 (464)
166 1xtp_A LMAJ004091AAA; SGPP, st 98.9 4.3E-09 1.5E-13 75.2 8.1 47 76-124 91-138 (254)
167 2p7i_A Hypothetical protein; p 98.9 2.2E-09 7.4E-14 76.1 6.4 55 65-123 30-85 (250)
168 2p35_A Trans-aconitate 2-methy 98.9 3E-09 1E-13 76.2 7.2 54 65-121 22-76 (259)
169 2pxx_A Uncharacterized protein 98.9 5.8E-09 2E-13 72.5 8.5 55 68-124 32-87 (215)
170 1x19_A CRTF-related protein; m 98.9 5.6E-09 1.9E-13 78.8 8.9 67 66-139 180-247 (359)
171 2b78_A Hypothetical protein SM 98.9 4.4E-09 1.5E-13 80.5 8.3 59 77-139 211-270 (385)
172 2jjq_A Uncharacterized RNA met 98.9 5.5E-09 1.9E-13 81.0 8.9 66 65-139 278-344 (425)
173 3l8d_A Methyltransferase; stru 98.9 4.3E-09 1.5E-13 74.7 7.4 45 75-122 50-95 (242)
174 3ou2_A SAM-dependent methyltra 98.9 9.1E-09 3.1E-13 71.7 8.9 52 65-120 34-86 (218)
175 1qzz_A RDMB, aclacinomycin-10- 98.9 6.5E-09 2.2E-13 78.6 8.6 59 76-139 180-239 (374)
176 2kw5_A SLR1183 protein; struct 98.9 3.9E-09 1.3E-13 73.1 6.7 48 76-127 28-76 (202)
177 2r3s_A Uncharacterized protein 98.9 1E-08 3.5E-13 76.3 9.4 67 66-139 153-222 (335)
178 2p8j_A S-adenosylmethionine-de 98.9 8.4E-09 2.9E-13 71.6 8.3 58 66-126 12-70 (209)
179 2yxl_A PH0851 protein, 450AA l 98.9 1.1E-08 3.9E-13 79.7 9.7 61 66-128 249-310 (450)
180 3ldu_A Putative methylase; str 98.9 9.3E-09 3.2E-13 78.8 9.0 74 61-139 180-291 (385)
181 3dmg_A Probable ribosomal RNA 98.9 7.6E-09 2.6E-13 79.2 8.4 48 77-127 232-280 (381)
182 3g5l_A Putative S-adenosylmeth 98.9 5.1E-09 1.7E-13 75.0 7.0 45 77-123 43-88 (253)
183 3k0b_A Predicted N6-adenine-sp 98.9 1.5E-08 5.2E-13 77.8 9.8 74 61-139 186-297 (393)
184 3q87_B N6 adenine specific DNA 98.9 4.5E-09 1.5E-13 71.5 6.2 49 66-118 11-59 (170)
185 3bgv_A MRNA CAP guanine-N7 met 98.9 1.2E-08 4.1E-13 75.5 8.8 59 65-125 21-80 (313)
186 3bzb_A Uncharacterized protein 98.9 5.3E-09 1.8E-13 76.7 6.8 46 76-123 77-124 (281)
187 2pjd_A Ribosomal RNA small sub 98.8 3.4E-09 1.2E-13 79.8 5.8 60 65-127 185-245 (343)
188 3bxo_A N,N-dimethyltransferase 98.8 8.9E-09 3E-13 72.8 7.6 55 65-122 27-82 (239)
189 3i9f_A Putative type 11 methyl 98.8 2.9E-09 1E-13 71.8 4.8 49 68-121 9-58 (170)
190 2ex4_A Adrenal gland protein A 98.8 4.1E-09 1.4E-13 75.1 5.8 46 78-125 79-125 (241)
191 1o9g_A RRNA methyltransferase; 98.8 3.7E-09 1.3E-13 75.9 5.5 48 78-125 51-100 (250)
192 3ccf_A Cyclopropane-fatty-acyl 98.8 8.3E-09 2.8E-13 75.1 7.3 52 66-122 47-99 (279)
193 3gwz_A MMCR; methyltransferase 98.8 2E-08 6.8E-13 76.2 9.6 59 76-139 200-259 (369)
194 1tw3_A COMT, carminomycin 4-O- 98.8 1.2E-08 4.2E-13 76.8 8.4 59 76-139 181-240 (360)
195 3ll7_A Putative methyltransfer 98.8 4.7E-09 1.6E-13 80.9 6.0 57 76-139 91-150 (410)
196 3ldg_A Putative uncharacterize 98.8 2.8E-08 9.7E-13 76.1 10.2 74 61-139 179-290 (384)
197 3e8s_A Putative SAM dependent 98.8 7.8E-09 2.7E-13 72.3 6.5 52 65-121 41-93 (227)
198 3bkw_A MLL3908 protein, S-aden 98.8 1.2E-08 4.2E-13 72.3 7.6 54 67-124 34-88 (243)
199 2as0_A Hypothetical protein PH 98.8 1.6E-08 5.5E-13 77.5 8.7 58 77-139 216-274 (396)
200 3e23_A Uncharacterized protein 98.8 8E-09 2.7E-13 72.1 6.4 44 76-122 41-85 (211)
201 3dli_A Methyltransferase; PSI- 98.8 8.4E-09 2.9E-13 73.4 6.7 43 76-121 39-82 (240)
202 2qe6_A Uncharacterized protein 98.8 2.8E-08 9.7E-13 72.7 9.5 55 78-139 77-135 (274)
203 2vdw_A Vaccinia virus capping 98.8 4.7E-09 1.6E-13 77.9 5.3 47 78-126 48-95 (302)
204 3dp7_A SAM-dependent methyltra 98.8 2.2E-08 7.7E-13 75.8 8.9 58 77-139 178-236 (363)
205 3opn_A Putative hemolysin; str 98.8 3.4E-09 1.2E-13 75.9 4.1 55 65-123 25-81 (232)
206 2avn_A Ubiquinone/menaquinone 98.8 1.2E-08 4E-13 73.6 6.9 52 69-123 45-97 (260)
207 1xj5_A Spermidine synthase 1; 98.8 1.9E-08 6.4E-13 75.7 8.1 61 76-139 118-181 (334)
208 2yx1_A Hypothetical protein MJ 98.8 7.1E-09 2.4E-13 78.0 5.7 57 76-139 193-250 (336)
209 3c0k_A UPF0064 protein YCCW; P 98.8 1.5E-08 5E-13 77.7 7.5 58 77-139 219-278 (396)
210 1sqg_A SUN protein, FMU protei 98.8 1.9E-08 6.3E-13 78.0 7.9 64 61-127 231-295 (429)
211 3bwc_A Spermidine synthase; SA 98.8 2.1E-08 7.3E-13 74.4 7.9 62 77-139 94-156 (304)
212 2a14_A Indolethylamine N-methy 98.8 2.6E-09 8.8E-14 77.5 2.8 47 76-124 53-100 (263)
213 3adn_A Spermidine synthase; am 98.8 1.2E-08 4.2E-13 75.5 6.3 48 77-125 82-130 (294)
214 2g72_A Phenylethanolamine N-me 98.8 8.7E-09 3E-13 75.4 5.5 58 64-123 57-115 (289)
215 1mjf_A Spermidine synthase; sp 98.8 1.8E-08 6E-13 74.0 7.1 45 76-122 73-118 (281)
216 4dmg_A Putative uncharacterize 98.8 1.9E-08 6.6E-13 77.2 7.5 50 76-128 212-262 (393)
217 3mcz_A O-methyltransferase; ad 98.8 2E-08 6.7E-13 75.4 7.5 59 76-139 176-236 (352)
218 2pt6_A Spermidine synthase; tr 98.8 1.8E-08 6.1E-13 75.4 7.2 61 76-139 114-177 (321)
219 2qm3_A Predicted methyltransfe 98.7 6.8E-08 2.3E-12 73.5 10.1 57 77-139 171-228 (373)
220 2o07_A Spermidine synthase; st 98.7 1.7E-08 5.8E-13 75.0 6.5 60 77-139 94-156 (304)
221 2b2c_A Spermidine synthase; be 98.7 2.3E-08 7.8E-13 74.7 7.0 61 76-139 106-169 (314)
222 1inl_A Spermidine synthase; be 98.7 2.8E-08 9.5E-13 73.5 7.4 60 77-139 89-151 (296)
223 3v97_A Ribosomal RNA large sub 98.7 3E-08 1E-12 81.2 8.2 59 77-139 538-597 (703)
224 1wxx_A TT1595, hypothetical pr 98.7 1.5E-08 5E-13 77.4 5.9 55 78-139 209-264 (382)
225 3h2b_A SAM-dependent methyltra 98.7 2E-08 6.9E-13 69.5 6.2 42 78-122 41-83 (203)
226 1p91_A Ribosomal RNA large sub 98.7 3.4E-08 1.2E-12 71.3 7.6 56 66-122 72-129 (269)
227 1iy9_A Spermidine synthase; ro 98.7 2.2E-08 7.6E-13 73.3 6.6 60 77-139 74-136 (275)
228 2f8l_A Hypothetical protein LM 98.7 3.3E-08 1.1E-12 74.4 7.5 51 77-127 129-184 (344)
229 3lcv_B Sisomicin-gentamicin re 98.7 1.1E-08 3.9E-13 74.5 4.7 52 76-128 130-182 (281)
230 3i53_A O-methyltransferase; CO 98.7 3.3E-08 1.1E-12 73.7 7.5 58 77-139 168-226 (332)
231 2ip2_A Probable phenazine-spec 98.7 2.3E-08 7.8E-13 74.6 6.3 58 76-139 166-224 (334)
232 3frh_A 16S rRNA methylase; met 98.7 7.9E-08 2.7E-12 69.3 8.7 47 77-127 104-151 (253)
233 3cgg_A SAM-dependent methyltra 98.7 4.5E-08 1.5E-12 66.8 7.0 45 76-123 44-89 (195)
234 3gjy_A Spermidine synthase; AP 98.7 5.3E-08 1.8E-12 72.8 7.8 55 80-139 91-146 (317)
235 2gs9_A Hypothetical protein TT 98.7 6.7E-08 2.3E-12 67.2 7.8 48 70-122 28-76 (211)
236 3hp7_A Hemolysin, putative; st 98.7 1.3E-08 4.5E-13 75.2 4.3 41 78-120 85-126 (291)
237 2i7c_A Spermidine synthase; tr 98.7 4E-08 1.4E-12 72.2 6.8 63 76-139 76-139 (283)
238 2aot_A HMT, histamine N-methyl 98.7 3.5E-08 1.2E-12 72.4 6.5 48 77-124 51-104 (292)
239 4e2x_A TCAB9; kijanose, tetron 98.7 2.7E-08 9.4E-13 76.3 6.1 43 76-121 105-148 (416)
240 1uir_A Polyamine aminopropyltr 98.7 5E-08 1.7E-12 72.7 7.2 61 76-139 75-139 (314)
241 1wg8_A Predicted S-adenosylmet 98.6 7.7E-08 2.6E-12 70.6 7.4 65 62-139 8-73 (285)
242 3giw_A Protein of unknown func 98.6 1E-07 3.6E-12 69.9 8.0 57 79-139 79-138 (277)
243 2okc_A Type I restriction enzy 98.6 1.1E-07 3.8E-12 73.9 8.5 71 55-127 150-233 (445)
244 2ih2_A Modification methylase 98.6 2.3E-08 8E-13 76.6 4.3 62 56-119 19-80 (421)
245 3axs_A Probable N(2),N(2)-dime 98.6 6.1E-08 2.1E-12 74.4 6.5 60 77-139 51-112 (392)
246 3v97_A Ribosomal RNA large sub 98.6 1.9E-07 6.4E-12 76.5 9.7 74 61-139 175-290 (703)
247 2oyr_A UPF0341 protein YHIQ; a 98.6 4E-08 1.4E-12 71.5 5.0 68 67-139 77-152 (258)
248 2dul_A N(2),N(2)-dimethylguano 98.6 9.8E-08 3.4E-12 72.9 7.4 47 78-125 47-94 (378)
249 2plw_A Ribosomal RNA methyltra 98.6 3.6E-08 1.2E-12 68.1 4.6 39 76-114 20-59 (201)
250 2i62_A Nicotinamide N-methyltr 98.6 2.2E-08 7.4E-13 71.9 3.5 47 77-125 55-102 (265)
251 2nyu_A Putative ribosomal RNA 98.6 6.4E-08 2.2E-12 66.5 5.4 40 76-115 20-67 (196)
252 2zig_A TTHA0409, putative modi 98.5 3E-07 1E-11 67.9 8.3 58 63-126 223-281 (297)
253 1ej0_A FTSJ; methyltransferase 98.5 1E-07 3.5E-12 63.8 4.8 41 76-117 20-60 (180)
254 3dou_A Ribosomal RNA large sub 98.5 1.3E-07 4.5E-12 65.6 5.4 36 76-114 23-58 (191)
255 1af7_A Chemotaxis receptor met 98.5 3.2E-07 1.1E-11 67.3 7.7 45 78-122 105-157 (274)
256 2cmg_A Spermidine synthase; tr 98.5 1.5E-07 5E-12 68.6 5.5 57 77-138 71-130 (262)
257 3cc8_A Putative methyltransfer 98.5 1.3E-07 4.5E-12 66.1 4.9 43 77-122 31-74 (230)
258 2ar0_A M.ecoki, type I restric 98.5 4.6E-07 1.6E-11 72.2 7.8 72 55-128 148-237 (541)
259 3cvo_A Methyltransferase-like 98.4 8.8E-07 3E-11 62.2 7.8 59 76-139 28-87 (202)
260 3tka_A Ribosomal RNA small sub 98.4 4.9E-07 1.7E-11 67.9 6.6 69 62-139 43-111 (347)
261 3lst_A CALO1 methyltransferase 98.4 5.6E-07 1.9E-11 67.6 6.2 58 76-139 182-239 (348)
262 1vlm_A SAM-dependent methyltra 98.3 8.3E-07 2.8E-11 62.2 5.8 37 78-121 47-84 (219)
263 4a6d_A Hydroxyindole O-methylt 98.3 1.8E-06 6.1E-11 65.2 7.4 58 76-139 177-235 (353)
264 2qfm_A Spermine synthase; sper 98.3 1.6E-06 5.4E-11 65.8 7.0 60 78-139 188-252 (364)
265 2oxt_A Nucleoside-2'-O-methylt 98.3 4.2E-07 1.4E-11 66.3 3.6 39 76-119 72-110 (265)
266 2k4m_A TR8_protein, UPF0146 pr 98.3 1.1E-06 3.8E-11 58.5 5.1 52 64-117 21-73 (153)
267 2wa2_A Non-structural protein 98.3 3.8E-07 1.3E-11 66.9 3.1 39 76-119 80-118 (276)
268 3reo_A (ISO)eugenol O-methyltr 98.3 1.4E-06 4.7E-11 66.1 6.0 42 76-119 201-242 (368)
269 3lkd_A Type I restriction-modi 98.3 3.7E-06 1.2E-10 67.1 8.5 73 55-127 196-273 (542)
270 3khk_A Type I restriction-modi 98.2 1.1E-06 3.9E-11 70.0 5.4 70 55-127 224-308 (544)
271 3sso_A Methyltransferase; macr 98.2 1.2E-06 4.3E-11 67.3 5.4 50 64-116 205-260 (419)
272 1g60_A Adenine-specific methyl 98.2 3E-06 1E-10 61.4 7.1 59 63-127 200-259 (260)
273 3p9c_A Caffeic acid O-methyltr 98.2 2.4E-06 8.2E-11 64.7 6.0 42 76-119 199-240 (364)
274 1fp2_A Isoflavone O-methyltran 98.2 1.5E-06 5.3E-11 65.2 4.5 43 76-120 186-229 (352)
275 1fp1_D Isoliquiritigenin 2'-O- 98.2 3.2E-06 1.1E-10 64.0 6.0 42 76-119 207-248 (372)
276 1i4w_A Mitochondrial replicati 98.1 1.6E-05 5.5E-10 60.2 9.5 66 54-122 29-102 (353)
277 2p41_A Type II methyltransfera 98.1 6.8E-07 2.3E-11 66.4 1.9 37 76-116 80-120 (305)
278 4gqb_A Protein arginine N-meth 98.1 5.5E-06 1.9E-10 67.1 7.1 57 79-139 358-418 (637)
279 1zg3_A Isoflavanone 4'-O-methy 98.0 6.2E-06 2.1E-10 62.1 4.3 42 76-119 191-232 (358)
280 3ua3_A Protein arginine N-meth 97.9 1.3E-05 4.6E-10 65.4 5.9 58 79-139 410-479 (745)
281 2zfu_A Nucleomethylin, cerebra 97.9 7.9E-06 2.7E-10 56.8 4.0 41 67-114 57-97 (215)
282 3s1s_A Restriction endonucleas 97.9 1.8E-05 6.2E-10 65.6 6.5 65 55-119 294-364 (878)
283 2py6_A Methyltransferase FKBM; 97.9 5.3E-05 1.8E-09 58.3 8.5 49 76-124 224-274 (409)
284 3ufb_A Type I restriction-modi 97.9 4.8E-05 1.6E-09 60.5 8.5 72 55-128 196-280 (530)
285 4fzv_A Putative methyltransfer 97.8 6.8E-05 2.3E-09 56.9 7.7 66 69-137 141-209 (359)
286 2xyq_A Putative 2'-O-methyl tr 97.7 3.3E-05 1.1E-09 57.0 4.8 37 76-114 61-103 (290)
287 2wk1_A NOVP; transferase, O-me 97.7 0.0002 6.7E-09 52.6 8.6 62 77-140 105-197 (282)
288 1boo_A Protein (N-4 cytosine-s 97.4 0.00039 1.3E-08 51.8 7.3 59 63-127 240-299 (323)
289 1eg2_A Modification methylase 97.3 0.00064 2.2E-08 50.6 7.0 59 62-126 229-291 (319)
290 2qy6_A UPF0209 protein YFCK; s 97.3 0.00031 1.1E-08 50.8 5.0 40 78-117 60-113 (257)
291 4auk_A Ribosomal RNA large sub 97.3 0.00024 8.1E-09 54.1 4.2 35 76-113 209-243 (375)
292 3gcz_A Polyprotein; flavivirus 97.1 0.00054 1.9E-08 50.1 4.6 41 75-116 87-127 (282)
293 3evf_A RNA-directed RNA polyme 97.0 0.00094 3.2E-08 48.7 5.0 39 76-115 72-110 (277)
294 3o4f_A Spermidine synthase; am 97.0 0.0039 1.3E-07 46.0 8.1 62 76-138 81-144 (294)
295 3p8z_A Mtase, non-structural p 96.8 0.00092 3.2E-08 47.9 3.5 40 75-115 75-114 (267)
296 3lkz_A Non-structural protein 96.7 0.00084 2.9E-08 49.6 3.0 39 75-114 91-129 (321)
297 2px2_A Genome polyprotein [con 96.7 0.00016 5.5E-09 52.3 -0.9 36 75-110 70-108 (269)
298 3eld_A Methyltransferase; flav 96.3 0.003 1E-07 46.6 3.4 39 76-115 79-117 (300)
299 1g55_A DNA cytosine methyltran 95.9 0.012 4.2E-07 44.0 5.5 45 80-124 3-48 (343)
300 3c6k_A Spermine synthase; sper 95.8 0.026 8.7E-07 43.1 6.8 46 77-124 204-250 (381)
301 2ld4_A Anamorsin; methyltransf 95.8 0.0023 8E-08 42.7 0.9 31 76-123 10-41 (176)
302 2c7p_A Modification methylase 95.7 0.02 6.7E-07 42.7 5.6 44 79-124 11-55 (327)
303 3g7u_A Cytosine-specific methy 95.4 0.029 9.9E-07 42.6 5.8 43 80-124 3-46 (376)
304 2dph_A Formaldehyde dismutase; 94.4 0.083 2.8E-06 40.0 6.0 43 76-119 183-226 (398)
305 3qv2_A 5-cytosine DNA methyltr 93.8 0.13 4.3E-06 38.4 5.8 47 78-124 9-57 (327)
306 3r24_A NSP16, 2'-O-methyl tran 93.8 0.098 3.4E-06 38.8 5.0 46 65-113 93-148 (344)
307 3b5i_A S-adenosyl-L-methionine 93.6 0.05 1.7E-06 41.4 3.3 46 79-124 53-113 (374)
308 2efj_A 3,7-dimethylxanthine me 93.6 0.094 3.2E-06 40.0 4.8 34 79-112 53-102 (384)
309 1zkd_A DUF185; NESG, RPR58, st 93.6 0.27 9.2E-06 37.5 7.3 45 80-124 82-133 (387)
310 4h0n_A DNMT2; SAH binding, tra 93.3 0.16 5.4E-06 37.9 5.5 45 80-124 4-49 (333)
311 1m6e_X S-adenosyl-L-methionnin 93.1 0.022 7.6E-07 43.1 0.7 46 79-124 52-113 (359)
312 4f3n_A Uncharacterized ACR, CO 93.1 0.13 4.5E-06 39.8 5.0 46 79-124 138-188 (432)
313 3ubt_Y Modification methylase 93.1 0.096 3.3E-06 38.5 4.1 42 80-123 1-43 (331)
314 1pl8_A Human sorbitol dehydrog 93.0 0.26 8.8E-06 36.6 6.4 42 76-119 169-212 (356)
315 2qrv_A DNA (cytosine-5)-methyl 93.0 0.19 6.5E-06 36.9 5.6 46 77-123 14-61 (295)
316 2oo3_A Protein involved in cat 93.0 0.024 8.1E-07 41.5 0.6 53 67-124 82-135 (283)
317 1f8f_A Benzyl alcohol dehydrog 92.7 0.21 7E-06 37.4 5.5 44 75-119 187-231 (371)
318 3s2e_A Zinc-containing alcohol 92.6 0.29 9.9E-06 36.0 6.2 42 76-119 164-206 (340)
319 1kol_A Formaldehyde dehydrogen 92.3 0.31 1.1E-05 36.7 6.1 43 76-119 183-226 (398)
320 1uuf_A YAHK, zinc-type alcohol 91.2 0.37 1.3E-05 36.1 5.4 42 76-119 192-234 (369)
321 1e3j_A NADP(H)-dependent ketos 91.0 0.64 2.2E-05 34.4 6.5 42 76-119 166-208 (352)
322 3two_A Mannitol dehydrogenase; 90.9 0.34 1.2E-05 35.8 4.9 42 76-119 174-216 (348)
323 3fpc_A NADP-dependent alcohol 90.6 0.46 1.6E-05 35.1 5.4 42 76-119 164-207 (352)
324 2h6e_A ADH-4, D-arabinose 1-de 90.5 0.77 2.6E-05 33.8 6.6 43 76-119 169-212 (344)
325 3me5_A Cytosine-specific methy 89.9 0.33 1.1E-05 38.1 4.2 42 79-122 88-130 (482)
326 3m6i_A L-arabinitol 4-dehydrog 89.6 0.8 2.7E-05 33.9 6.0 44 76-121 177-223 (363)
327 3jv7_A ADH-A; dehydrogenase, n 89.6 0.72 2.5E-05 33.9 5.7 43 76-119 169-212 (345)
328 4ej6_A Putative zinc-binding d 89.5 0.98 3.4E-05 33.7 6.5 43 76-119 180-223 (370)
329 1p0f_A NADP-dependent alcohol 88.9 0.58 2E-05 34.9 4.8 44 75-119 188-232 (373)
330 3uog_A Alcohol dehydrogenase; 88.7 0.79 2.7E-05 34.1 5.4 43 75-119 186-229 (363)
331 1cdo_A Alcohol dehydrogenase; 88.4 0.65 2.2E-05 34.6 4.8 43 75-119 189-233 (374)
332 1rjw_A ADH-HT, alcohol dehydro 88.3 1.8 6.2E-05 31.7 7.1 42 76-119 162-204 (339)
333 4ft4_B DNA (cytosine-5)-methyl 88.0 0.63 2.2E-05 38.4 4.8 47 78-124 211-262 (784)
334 2jhf_A Alcohol dehydrogenase E 87.8 0.75 2.5E-05 34.3 4.8 43 75-119 188-232 (374)
335 2fzw_A Alcohol dehydrogenase c 87.8 0.75 2.6E-05 34.2 4.8 44 75-119 187-231 (373)
336 1piw_A Hypothetical zinc-type 87.7 0.78 2.7E-05 34.0 4.8 42 76-119 177-219 (360)
337 4dkj_A Cytosine-specific methy 87.6 0.6 2.1E-05 35.7 4.2 45 80-124 11-60 (403)
338 1e3i_A Alcohol dehydrogenase, 87.6 0.78 2.7E-05 34.2 4.8 43 75-119 192-236 (376)
339 3uko_A Alcohol dehydrogenase c 87.4 0.64 2.2E-05 34.7 4.2 44 75-119 190-234 (378)
340 4eez_A Alcohol dehydrogenase 1 87.4 1.8 6.3E-05 31.6 6.7 43 76-119 161-204 (348)
341 3iht_A S-adenosyl-L-methionine 86.8 1.9 6.4E-05 28.9 5.7 34 77-111 39-72 (174)
342 3ip1_A Alcohol dehydrogenase, 86.5 1.3 4.4E-05 33.5 5.5 43 75-119 210-254 (404)
343 1jvb_A NAD(H)-dependent alcoho 86.3 1.9 6.3E-05 31.8 6.2 43 76-119 168-212 (347)
344 1pqw_A Polyketide synthase; ro 86.2 0.92 3.2E-05 30.4 4.2 42 76-119 36-79 (198)
345 4b7c_A Probable oxidoreductase 86.1 1.1 3.8E-05 32.7 4.9 46 75-122 146-194 (336)
346 3gms_A Putative NADPH:quinone 85.9 0.7 2.4E-05 34.0 3.7 43 75-119 141-185 (340)
347 2eih_A Alcohol dehydrogenase; 85.6 1.8 6E-05 31.8 5.7 43 75-119 163-207 (343)
348 1rjd_A PPM1P, carboxy methyl t 85.3 2.8 9.7E-05 31.1 6.7 47 77-125 96-143 (334)
349 3swr_A DNA (cytosine-5)-methyl 85.1 1.3 4.6E-05 37.8 5.3 44 79-123 540-584 (1002)
350 2hcy_A Alcohol dehydrogenase 1 84.4 1.2 4.2E-05 32.7 4.5 42 76-119 167-210 (347)
351 1v3u_A Leukotriene B4 12- hydr 84.1 1.5 5.1E-05 32.0 4.7 43 75-119 142-186 (333)
352 1vj0_A Alcohol dehydrogenase, 84.1 1.7 6E-05 32.4 5.2 43 76-119 193-236 (380)
353 3abi_A Putative uncharacterize 83.8 2.4 8.3E-05 31.5 5.9 46 77-124 14-60 (365)
354 3llv_A Exopolyphosphatase-rela 83.5 1.7 5.9E-05 27.3 4.3 39 79-119 6-45 (141)
355 1h2b_A Alcohol dehydrogenase; 83.4 3 0.0001 30.8 6.2 43 76-119 184-227 (359)
356 2j3h_A NADP-dependent oxidored 82.9 1.5 5.1E-05 32.1 4.3 46 75-122 152-200 (345)
357 3goh_A Alcohol dehydrogenase, 82.7 1.2 4.1E-05 32.3 3.7 42 75-119 139-181 (315)
358 3pvc_A TRNA 5-methylaminomethy 82.3 1.3 4.4E-05 35.9 4.1 42 78-119 58-113 (689)
359 3fwz_A Inner membrane protein 81.9 1.2 4.1E-05 28.3 3.1 39 79-119 7-46 (140)
360 2d8a_A PH0655, probable L-thre 81.6 2.2 7.5E-05 31.4 4.8 42 75-119 165-208 (348)
361 2cf5_A Atccad5, CAD, cinnamyl 81.6 2.6 8.8E-05 31.2 5.2 45 76-122 177-224 (357)
362 3ps9_A TRNA 5-methylaminomethy 80.9 3 0.0001 33.6 5.7 42 80-121 68-124 (676)
363 2c0c_A Zinc binding alcohol de 79.9 4.7 0.00016 29.8 6.2 42 76-119 161-204 (362)
364 1yqd_A Sinapyl alcohol dehydro 79.9 3.5 0.00012 30.6 5.5 45 76-122 184-231 (366)
365 1iz0_A Quinone oxidoreductase; 79.7 1.3 4.5E-05 31.9 3.0 42 76-119 123-166 (302)
366 2dq4_A L-threonine 3-dehydroge 79.1 1.8 6.2E-05 31.8 3.7 41 76-119 163-205 (343)
367 4eye_A Probable oxidoreductase 77.6 2.2 7.6E-05 31.3 3.7 43 75-119 156-200 (342)
368 3ic5_A Putative saccharopine d 77.4 4.4 0.00015 24.1 4.6 40 78-119 4-45 (118)
369 3jyn_A Quinone oxidoreductase; 77.3 3.2 0.00011 30.2 4.5 43 75-119 137-181 (325)
370 4a2c_A Galactitol-1-phosphate 77.2 6.6 0.00023 28.6 6.2 43 76-119 158-201 (346)
371 4fn4_A Short chain dehydrogena 76.1 11 0.00039 26.7 7.0 49 78-127 6-56 (254)
372 3ioy_A Short-chain dehydrogena 75.7 12 0.00043 27.0 7.3 48 78-126 7-56 (319)
373 3svt_A Short-chain type dehydr 75.7 12 0.0004 26.4 7.1 48 78-126 10-59 (281)
374 1qor_A Quinone oxidoreductase; 75.6 3.6 0.00012 29.8 4.4 43 75-119 137-181 (327)
375 3av4_A DNA (cytosine-5)-methyl 75.5 3.9 0.00013 36.1 5.1 44 79-123 851-895 (1330)
376 3ucx_A Short chain dehydrogena 75.3 16 0.00055 25.4 7.7 48 78-126 10-59 (264)
377 3tjr_A Short chain dehydrogena 75.2 11 0.00039 26.9 7.0 48 78-126 30-79 (301)
378 1yb5_A Quinone oxidoreductase; 74.8 6.4 0.00022 29.0 5.6 43 75-119 167-211 (351)
379 1lss_A TRK system potassium up 74.7 5.6 0.00019 24.5 4.6 39 79-119 4-43 (140)
380 3qiv_A Short-chain dehydrogena 74.1 12 0.00042 25.6 6.8 47 78-125 8-56 (253)
381 4dvj_A Putative zinc-dependent 73.5 4.8 0.00016 29.8 4.7 41 78-119 171-213 (363)
382 1wly_A CAAR, 2-haloacrylate re 73.3 7.2 0.00025 28.3 5.5 43 75-119 142-186 (333)
383 2b5w_A Glucose dehydrogenase; 72.7 4 0.00014 30.1 4.0 42 76-119 164-218 (357)
384 3qwb_A Probable quinone oxidor 72.7 6.2 0.00021 28.7 5.1 43 75-119 145-189 (334)
385 3h7a_A Short chain dehydrogena 71.9 9.3 0.00032 26.5 5.7 48 78-126 6-55 (252)
386 3tos_A CALS11; methyltransfera 71.6 13 0.00044 26.6 6.3 34 77-110 68-107 (257)
387 3rkr_A Short chain oxidoreduct 71.4 13 0.00043 25.9 6.3 48 78-126 28-77 (262)
388 3o38_A Short chain dehydrogena 71.3 19 0.00065 24.9 7.2 48 78-125 21-70 (266)
389 3c85_A Putative glutathione-re 71.0 6.6 0.00022 25.8 4.5 39 79-119 39-79 (183)
390 2g1u_A Hypothetical protein TM 70.9 2.9 0.0001 26.8 2.7 41 77-119 17-58 (155)
391 3fbg_A Putative arginate lyase 70.8 9 0.00031 28.0 5.6 40 78-119 150-191 (346)
392 3lyl_A 3-oxoacyl-(acyl-carrier 70.5 16 0.00053 25.0 6.6 48 78-126 4-53 (247)
393 3mag_A VP39; methylated adenin 70.0 14 0.00048 27.2 6.2 37 78-114 60-99 (307)
394 2j8z_A Quinone oxidoreductase; 70.0 7.5 0.00026 28.6 5.0 43 75-119 159-203 (354)
395 3sju_A Keto reductase; short-c 69.8 16 0.00056 25.7 6.7 48 78-126 23-72 (279)
396 1xg5_A ARPG836; short chain de 69.7 20 0.00067 25.1 7.0 48 78-126 31-80 (279)
397 3o26_A Salutaridine reductase; 69.6 15 0.00052 25.8 6.5 48 78-126 11-60 (311)
398 3krt_A Crotonyl COA reductase; 69.5 5.5 0.00019 30.5 4.3 43 75-119 225-269 (456)
399 3awd_A GOX2181, putative polyo 69.0 21 0.00071 24.4 7.0 46 78-124 12-59 (260)
400 3vtf_A UDP-glucose 6-dehydroge 68.8 4.1 0.00014 31.6 3.4 38 80-119 22-60 (444)
401 1yb1_A 17-beta-hydroxysteroid 67.2 23 0.0008 24.7 7.0 47 78-125 30-78 (272)
402 3v8b_A Putative dehydrogenase, 67.1 23 0.00077 25.1 6.9 47 78-125 27-75 (283)
403 3imf_A Short chain dehydrogena 66.7 15 0.00052 25.4 5.9 46 78-124 5-52 (257)
404 4g81_D Putative hexonate dehyd 66.6 13 0.00045 26.3 5.5 49 78-127 8-58 (255)
405 2aef_A Calcium-gated potassium 66.5 13 0.00044 25.4 5.4 40 78-119 8-47 (234)
406 3gaf_A 7-alpha-hydroxysteroid 66.4 16 0.00055 25.3 6.0 48 78-126 11-60 (256)
407 3tfo_A Putative 3-oxoacyl-(acy 66.3 19 0.00063 25.3 6.3 48 78-126 3-52 (264)
408 4dup_A Quinone oxidoreductase; 66.3 11 0.00036 27.8 5.2 43 75-119 164-208 (353)
409 1fmc_A 7 alpha-hydroxysteroid 66.0 27 0.00093 23.7 7.0 46 78-124 10-57 (255)
410 3oj0_A Glutr, glutamyl-tRNA re 65.1 22 0.00076 22.2 6.1 48 68-119 12-60 (144)
411 4g65_A TRK system potassium up 65.1 8.5 0.00029 29.8 4.6 42 79-122 3-46 (461)
412 2zb4_A Prostaglandin reductase 65.1 15 0.0005 26.9 5.7 45 76-122 156-206 (357)
413 2jah_A Clavulanic acid dehydro 64.7 29 0.00099 23.8 7.0 46 78-124 6-53 (247)
414 3vrd_B FCCB subunit, flavocyto 64.7 6 0.0002 29.3 3.6 34 79-113 2-37 (401)
415 3t4x_A Oxidoreductase, short c 64.7 20 0.00069 24.9 6.2 47 78-125 9-57 (267)
416 1zem_A Xylitol dehydrogenase; 64.6 27 0.00092 24.2 6.9 46 78-124 6-53 (262)
417 2rhc_B Actinorhodin polyketide 64.4 28 0.00096 24.4 7.0 46 78-124 21-68 (277)
418 3vyw_A MNMC2; tRNA wobble urid 64.3 9.4 0.00032 28.1 4.4 34 78-111 96-134 (308)
419 2cdc_A Glucose dehydrogenase g 64.1 8.8 0.0003 28.3 4.4 39 79-119 181-223 (366)
420 2ae2_A Protein (tropinone redu 64.0 27 0.00093 24.1 6.8 46 78-124 8-55 (260)
421 3l9w_A Glutathione-regulated p 64.0 8.6 0.00029 29.3 4.4 39 79-119 4-43 (413)
422 3tox_A Short chain dehydrogena 63.5 16 0.00055 25.9 5.5 46 78-124 7-54 (280)
423 4a0s_A Octenoyl-COA reductase/ 63.5 8.5 0.00029 29.2 4.3 43 75-119 217-261 (447)
424 1ae1_A Tropinone reductase-I; 63.4 31 0.001 24.1 7.0 46 78-124 20-67 (273)
425 3pk0_A Short-chain dehydrogena 63.0 25 0.00086 24.4 6.4 48 78-126 9-58 (262)
426 3iup_A Putative NADPH:quinone 62.7 8.2 0.00028 28.7 4.0 41 77-119 169-212 (379)
427 3lf2_A Short chain oxidoreduct 62.7 34 0.0011 23.7 7.1 46 78-124 7-54 (265)
428 1xu9_A Corticosteroid 11-beta- 62.6 23 0.0008 24.8 6.3 46 78-124 27-74 (286)
429 1xa0_A Putative NADPH dependen 62.3 3.1 0.00011 30.2 1.6 42 76-119 146-190 (328)
430 4ibo_A Gluconate dehydrogenase 62.0 18 0.00061 25.4 5.5 48 78-126 25-74 (271)
431 3nzo_A UDP-N-acetylglucosamine 61.8 35 0.0012 25.4 7.4 45 78-123 34-81 (399)
432 3i1j_A Oxidoreductase, short c 60.9 17 0.00057 24.8 5.1 48 78-126 13-62 (247)
433 3t7c_A Carveol dehydrogenase; 60.8 36 0.0012 24.2 7.0 48 78-126 27-88 (299)
434 3sx2_A Putative 3-ketoacyl-(ac 60.5 35 0.0012 23.7 6.9 47 78-125 12-72 (278)
435 1yxm_A Pecra, peroxisomal tran 60.4 41 0.0014 23.6 7.6 46 78-124 17-64 (303)
436 3nyw_A Putative oxidoreductase 60.2 27 0.00093 24.0 6.2 47 78-125 6-54 (250)
437 1iy8_A Levodione reductase; ox 60.1 39 0.0013 23.3 7.0 46 78-124 12-59 (267)
438 2dpo_A L-gulonate 3-dehydrogen 60.1 13 0.00044 27.2 4.6 40 80-122 7-49 (319)
439 3uve_A Carveol dehydrogenase ( 60.1 37 0.0013 23.7 7.0 34 78-112 10-44 (286)
440 3r1i_A Short-chain type dehydr 60.0 20 0.00069 25.2 5.5 47 78-125 31-79 (276)
441 1tt7_A YHFP; alcohol dehydroge 60.0 4.4 0.00015 29.4 2.0 42 76-119 147-191 (330)
442 3ce6_A Adenosylhomocysteinase; 60.0 18 0.0006 28.4 5.5 42 76-119 271-313 (494)
443 3pxx_A Carveol dehydrogenase; 59.9 38 0.0013 23.6 7.0 34 78-112 9-43 (287)
444 1xkq_A Short-chain reductase f 59.4 28 0.00096 24.3 6.2 46 78-124 5-52 (280)
445 3cxt_A Dehydrogenase with diff 59.4 34 0.0012 24.3 6.7 46 78-124 33-80 (291)
446 4dio_A NAD(P) transhydrogenase 59.2 14 0.00046 28.3 4.7 40 78-119 189-229 (405)
447 2zat_A Dehydrogenase/reductase 58.6 35 0.0012 23.5 6.5 46 78-124 13-60 (260)
448 3gaz_A Alcohol dehydrogenase s 58.5 13 0.00045 27.1 4.5 42 75-119 147-190 (343)
449 3ai3_A NADPH-sorbose reductase 58.5 40 0.0014 23.2 6.9 45 78-123 6-52 (263)
450 2qq5_A DHRS1, dehydrogenase/re 58.3 29 0.001 23.9 6.1 46 78-124 4-51 (260)
451 2hmt_A YUAA protein; RCK, KTN, 58.1 7.7 0.00026 23.8 2.8 39 79-119 6-45 (144)
452 3nx4_A Putative oxidoreductase 57.9 7.2 0.00025 28.1 2.9 37 81-119 149-187 (324)
453 1wma_A Carbonyl reductase [NAD 57.7 34 0.0012 23.3 6.4 46 78-124 3-51 (276)
454 3ftp_A 3-oxoacyl-[acyl-carrier 57.6 27 0.00094 24.4 5.9 48 78-126 27-76 (270)
455 3pgx_A Carveol dehydrogenase; 57.4 44 0.0015 23.3 7.0 47 78-125 14-75 (280)
456 1xq1_A Putative tropinone redu 57.1 35 0.0012 23.4 6.3 46 78-124 13-60 (266)
457 3p2y_A Alanine dehydrogenase/p 56.9 16 0.00054 27.7 4.6 40 78-119 183-223 (381)
458 4fc7_A Peroxisomal 2,4-dienoyl 56.9 47 0.0016 23.2 7.1 45 78-123 26-72 (277)
459 4egf_A L-xylulose reductase; s 56.7 33 0.0011 23.8 6.2 46 78-124 19-66 (266)
460 2c07_A 3-oxoacyl-(acyl-carrier 56.5 48 0.0016 23.2 7.6 45 79-124 44-90 (285)
461 1dlj_A UDP-glucose dehydrogena 56.5 29 0.00098 26.1 6.1 37 81-119 2-38 (402)
462 2yut_A Putative short-chain ox 56.3 38 0.0013 22.1 6.2 37 81-119 2-38 (207)
463 1w6u_A 2,4-dienoyl-COA reducta 56.1 43 0.0015 23.4 6.8 45 78-123 25-71 (302)
464 4iin_A 3-ketoacyl-acyl carrier 55.9 38 0.0013 23.5 6.4 47 78-125 28-77 (271)
465 1oaa_A Sepiapterin reductase; 55.7 38 0.0013 23.2 6.3 45 79-124 6-55 (259)
466 4imr_A 3-oxoacyl-(acyl-carrier 55.5 19 0.00064 25.4 4.7 47 78-125 32-80 (275)
467 3tsc_A Putative oxidoreductase 55.1 50 0.0017 22.9 7.0 47 78-125 10-71 (277)
468 2vhw_A Alanine dehydrogenase; 55.0 23 0.00077 26.5 5.3 40 78-119 167-207 (377)
469 3pid_A UDP-glucose 6-dehydroge 54.8 14 0.00048 28.4 4.1 39 79-119 36-74 (432)
470 3l77_A Short-chain alcohol deh 54.7 46 0.0016 22.4 6.9 44 79-123 2-47 (235)
471 3rih_A Short chain dehydrogena 53.6 26 0.00087 25.0 5.2 47 78-125 40-88 (293)
472 1xhl_A Short-chain dehydrogena 53.6 40 0.0014 23.9 6.3 46 78-124 25-72 (297)
473 4da9_A Short-chain dehydrogena 53.5 55 0.0019 22.9 7.0 47 78-125 28-77 (280)
474 1x13_A NAD(P) transhydrogenase 53.3 18 0.00061 27.4 4.5 40 78-119 171-211 (401)
475 3ado_A Lambda-crystallin; L-gu 53.3 23 0.0008 26.0 5.0 42 79-123 6-50 (319)
476 3l4b_C TRKA K+ channel protien 52.9 8.2 0.00028 26.1 2.4 37 81-119 2-39 (218)
477 3oec_A Carveol dehydrogenase ( 52.7 47 0.0016 23.8 6.6 34 78-112 45-79 (317)
478 2gdz_A NAD+-dependent 15-hydro 52.6 52 0.0018 22.6 6.7 44 78-122 6-51 (267)
479 2vz8_A Fatty acid synthase; tr 52.6 2.9 0.0001 39.1 0.0 48 77-124 1239-1291(2512)
480 2vl7_A XPD; helicase, unknown 52.5 63 0.0022 25.2 7.7 61 64-127 15-76 (540)
481 1geg_A Acetoin reductase; SDR 51.6 55 0.0019 22.4 6.9 44 80-124 3-48 (256)
482 2uyo_A Hypothetical protein ML 51.6 36 0.0012 24.8 5.7 44 80-126 104-148 (310)
483 1ja9_A 4HNR, 1,3,6,8-tetrahydr 51.5 49 0.0017 22.7 6.3 46 78-124 20-68 (274)
484 1f0y_A HCDH, L-3-hydroxyacyl-C 51.4 19 0.00064 25.7 4.2 37 80-119 16-54 (302)
485 3f1l_A Uncharacterized oxidore 51.4 34 0.0012 23.5 5.5 46 78-124 11-58 (252)
486 2pd6_A Estradiol 17-beta-dehyd 51.4 47 0.0016 22.7 6.2 46 78-124 6-53 (264)
487 4dry_A 3-oxoacyl-[acyl-carrier 51.3 33 0.0011 24.2 5.4 46 78-124 32-79 (281)
488 2dpm_A M.dpnii 1, protein (ade 51.2 28 0.00097 25.0 5.1 48 64-119 24-71 (284)
489 3e9n_A Putative short-chain de 50.7 48 0.0017 22.5 6.2 41 78-119 4-44 (245)
490 1vl8_A Gluconate 5-dehydrogena 50.2 61 0.0021 22.5 6.8 44 78-122 20-65 (267)
491 1gee_A Glucose 1-dehydrogenase 49.7 50 0.0017 22.5 6.1 45 78-123 6-53 (261)
492 4e12_A Diketoreductase; oxidor 49.7 21 0.00073 25.3 4.2 40 80-121 5-46 (283)
493 1l7d_A Nicotinamide nucleotide 49.6 18 0.00063 27.0 4.0 40 78-119 171-211 (384)
494 2uvd_A 3-oxoacyl-(acyl-carrier 49.3 57 0.002 22.1 6.4 45 79-124 4-51 (246)
495 3oid_A Enoyl-[acyl-carrier-pro 49.2 62 0.0021 22.3 6.6 47 78-125 3-52 (258)
496 2pnf_A 3-oxoacyl-[acyl-carrier 49.0 56 0.0019 22.0 6.2 44 78-122 6-51 (248)
497 3ojo_A CAP5O; rossmann fold, c 48.7 12 0.00042 28.8 2.9 41 77-119 9-50 (431)
498 3s55_A Putative short-chain de 48.7 65 0.0022 22.4 7.0 34 78-112 9-43 (281)
499 1spx_A Short-chain reductase f 48.1 56 0.0019 22.6 6.3 44 78-122 5-50 (278)
500 1pjc_A Protein (L-alanine dehy 48.1 34 0.0012 25.3 5.3 41 79-121 167-209 (361)
No 1
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.82 E-value=1.5e-19 Score=128.70 Aligned_cols=129 Identities=32% Similarity=0.504 Sum_probs=108.1
Q ss_pred cccccccchhhhcCCCCCHHHHHHHHhCCCCCCCCCCCCccccccccccCCCCcccchHHHHHHHHHHhcccCCCCEEEE
Q psy7827 5 KIFMVPTDYIVEIDSIKSPRVIDAMIHIDRGHFCAHNDSRKYMLAARDIGYGSIIDNPVQHAEVLELLKDKLVPGAKVLD 84 (140)
Q Consensus 5 ~~~m~~~~~l~~~~~~~~~~~~~a~~~~~r~~f~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLD 84 (140)
+..|++ +|++.+++.++.+.++|..+||+.|.+.. .|.+.++..+.++.+..+.+...+++.+...+.++.+|||
T Consensus 12 ~~~~~~--~l~~~~~~~~~~v~~~~~~~~r~~f~p~~---~y~d~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~VLd 86 (227)
T 2pbf_A 12 HKSLLE--NLKRRGIIDDDDVYNTMLQVDRGKYIKEI---PYIDTPVYISHGVTISAPHMHALSLKRLINVLKPGSRAID 86 (227)
T ss_dssp HHHHHH--HHHHTTSCCCHHHHHHHHTSCGGGTCSSS---TTSSSCEEEETTEEECCHHHHHHHHHHHTTTSCTTCEEEE
T ss_pred HHHHHH--HHHhcCCcCCHHHHHHHHhCCHHHcCCcc---cCCCCccccCCCCccCChHHHHHHHHHHHhhCCCCCEEEE
Confidence 455774 88888878999999999999999999876 8999999999999999999999999988544778899999
Q ss_pred EcCCCChHHHHHHHHhC----CCCeEEEEcCCHHHHHHH-hchhhcCCCCC-CCcEEEee
Q psy7827 85 VGSGSGYLTTCFAHMVG----KNGSVVGVEHIPEIVNHA-SNVTTLHYPKL-NKRIKFIC 138 (140)
Q Consensus 85 iGcG~G~~~~~la~~~~----~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~-~~~i~~~~ 138 (140)
+|||+|.++..+++..+ +.++|+++|+++.+++.| +++...+...+ ..++++++
T Consensus 87 iG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 146 (227)
T 2pbf_A 87 VGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIH 146 (227)
T ss_dssp ESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEE
T ss_pred ECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEE
Confidence 99999999999999875 556899999999999999 88887762100 13566654
No 2
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.81 E-value=1.2e-19 Score=129.41 Aligned_cols=116 Identities=41% Similarity=0.652 Sum_probs=101.4
Q ss_pred ccccccchhhhcCCCCCHHHHHHHHhCCCCCCCCCCCCccccccccccCCCCcccchHHHHHHHHHHhcccCCCCEEEEE
Q psy7827 6 IFMVPTDYIVEIDSIKSPRVIDAMIHIDRGHFCAHNDSRKYMLAARDIGYGSIIDNPVQHAEVLELLKDKLVPGAKVLDV 85 (140)
Q Consensus 6 ~~m~~~~~l~~~~~~~~~~~~~a~~~~~r~~f~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDi 85 (140)
..|+ ++|+..+++.++.+.++|..+||+.|.+.. +|.+.+++.++++.++.|.+...+++.+...+.++.+|||+
T Consensus 17 ~~l~--~~l~~~~~~~~~~~~~a~~~~~r~~f~~~~---~y~d~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~VLdi 91 (227)
T 1r18_A 17 EDLI--RQLKDHGVIASDAVAQAMKETDRKHYSPRN---PYMDAPQPIGGGVTISAPHMHAFALEYLRDHLKPGARILDV 91 (227)
T ss_dssp HHHH--HHHHHTTSCCCHHHHHHHHTSCGGGTCSSC---TTBSSCEEEETTEEECCHHHHHHHHHHTTTTCCTTCEEEEE
T ss_pred HHHH--HHHHhcCCCCCHHHHHHHHhCCHHHcCCcc---cccCCCcccCCCCccCChHHHHHHHHHHHhhCCCCCEEEEE
Confidence 4567 488888888899999999999999999877 89999999999999999999999999885447788999999
Q ss_pred cCCCChHHHHHHHHhCC-----CCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 86 GSGSGYLTTCFAHMVGK-----NGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 86 GcG~G~~~~~la~~~~~-----~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
|||+|.++..+++..+. .++|+++|+++.+++.| +++...+
T Consensus 92 G~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~ 138 (227)
T 1r18_A 92 GSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDD 138 (227)
T ss_dssp SCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcC
Confidence 99999999999997642 35799999999999999 8877654
No 3
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.80 E-value=3e-19 Score=125.59 Aligned_cols=126 Identities=28% Similarity=0.452 Sum_probs=107.2
Q ss_pred cccccccccchhhhcCCCCCHHHHHHHHhCCCCCCCCCC-CCccccccccccCCCCcccchHHHHHHHHHHhcccCCCCE
Q psy7827 3 GYKIFMVPTDYIVEIDSIKSPRVIDAMIHIDRGHFCAHN-DSRKYMLAARDIGYGSIIDNPVQHAEVLELLKDKLVPGAK 81 (140)
Q Consensus 3 ~~~~~m~~~~~l~~~~~~~~~~~~~a~~~~~r~~f~~~~-~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 81 (140)
..|..|+ .++|+.++ +.++++.++|..+||+.|.+.. ....|.+.+.+.+.+..+..+.....+++.+. +.++.+
T Consensus 5 ~~~~~~~-~~~l~~~g-v~~~~~~~~~~~~~r~~f~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~ 80 (210)
T 3lbf_A 5 SRRVQAL-LDQLRAQG-IQDEQVLNALAAVPREKFVDEAFEQKAWDNIALPIGQGQTISQPYMVARMTELLE--LTPQSR 80 (210)
T ss_dssp CHHHHHH-HHHHHHTT-CCCHHHHHHHHHSCGGGGSCGGGGGGTTSSSCEECTTSCEECCHHHHHHHHHHTT--CCTTCE
T ss_pred hHHHHHH-HHHHHHcC-CCCHHHHHHHHhCCHHHcCCcchhhhccCCCccccCCCCEeCCHHHHHHHHHhcC--CCCCCE
Confidence 3456666 37999998 5799999999999999998874 46688888888888988999999999999887 788999
Q ss_pred EEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 82 VLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 82 vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
|||+|||+|.++..+++.. ++++++|+++.+++.| +++...+.. +++++++
T Consensus 81 vLdiG~G~G~~~~~la~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~----~v~~~~~ 132 (210)
T 3lbf_A 81 VLEIGTGSGYQTAILAHLV---QHVCSVERIKGLQWQARRRLKNLDLH----NVSTRHG 132 (210)
T ss_dssp EEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHHHTTCC----SEEEEES
T ss_pred EEEEcCCCCHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCC----ceEEEEC
Confidence 9999999999999999983 4699999999999999 998887763 4666543
No 4
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.79 E-value=8.4e-19 Score=123.71 Aligned_cols=119 Identities=37% Similarity=0.604 Sum_probs=102.6
Q ss_pred ccccccccchh-hhcCCCCCHHHHHHHHhCCCCCCCCCC-CCccccccccccCCCCcccchHHHHHHHHHHhcccCCCCE
Q psy7827 4 YKIFMVPTDYI-VEIDSIKSPRVIDAMIHIDRGHFCAHN-DSRKYMLAARDIGYGSIIDNPVQHAEVLELLKDKLVPGAK 81 (140)
Q Consensus 4 ~~~~m~~~~~l-~~~~~~~~~~~~~a~~~~~r~~f~~~~-~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 81 (140)
.|..|+ ++| ++++ +.++++.++|..+||+.|.+.. ....|.+.+.....+..+..+.....+++.+. +.++.+
T Consensus 6 ~~~~~~--~~l~~~~~-~~~~~v~~a~~~~~r~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 80 (215)
T 2yxe_A 6 QKKAVI--EKLIREGY-IKSKRVIDALLKVPREEFLPEHLKEYAYVDTPLEIGYGQTISAIHMVGMMCELLD--LKPGMK 80 (215)
T ss_dssp HHHHHH--HHHHHHTS-CCCHHHHHHHHHSCGGGGSCGGGGGGTTSCSCEEEETTEEECCHHHHHHHHHHTT--CCTTCE
T ss_pred HHHHHH--HHhHHhcC-CCCHHHHHHHHhCCHHHcCCchhhhhcccCCCccCCCCcEeCcHHHHHHHHHhhC--CCCCCE
Confidence 356688 488 8888 6899999999999999988764 45578888888888888888988888888886 788999
Q ss_pred EEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 82 VLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 82 vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
|||+|||+|.++..+++..++..+++++|+++.+++.| +++...+.
T Consensus 81 vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~ 127 (215)
T 2yxe_A 81 VLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY 127 (215)
T ss_dssp EEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred EEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 99999999999999999985557899999999999999 88877665
No 5
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.77 E-value=2.4e-18 Score=122.30 Aligned_cols=115 Identities=43% Similarity=0.718 Sum_probs=100.5
Q ss_pred cccccchhhhcCCCCCHHHHHHHHhCCCCCCCCCCCCccccccccccCCCCcccchHHHHHHHHHHhcccCCCCEEEEEc
Q psy7827 7 FMVPTDYIVEIDSIKSPRVIDAMIHIDRGHFCAHNDSRKYMLAARDIGYGSIIDNPVQHAEVLELLKDKLVPGAKVLDVG 86 (140)
Q Consensus 7 ~m~~~~~l~~~~~~~~~~~~~a~~~~~r~~f~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG 86 (140)
.|+ ++|++.+++.++.+.++|..++|+.|.+.. .|.+.+...+++..+..+.....+++.+...+.++.+|||+|
T Consensus 11 ~l~--~~l~~~g~~~~~~~~~a~~~~~r~~f~~~~---~y~~~~~~~~~~~~~~~p~~~~~~l~~l~~~~~~~~~vLDiG 85 (226)
T 1i1n_A 11 ELI--HNLRKNGIIKTDKVFEVMLATDRSHYAKCN---PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVG 85 (226)
T ss_dssp HHH--HHHHHTTSCCSHHHHHHHHTSCGGGTCSSC---TTSSSCEEEETTEEECCHHHHHHHHHHTTTTSCTTCEEEEET
T ss_pred HHH--HHHHHcCCcCCHHHHHHHHhCCHHHcCCCc---cCCCCccccCCCceecCHHHHHHHHHHHHhhCCCCCEEEEEc
Confidence 455 588889988899999999999999998876 888888888888888899988888888854467889999999
Q ss_pred CCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 87 SGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 87 cG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
||+|..+..+++..++.++|+++|+++.+++.| +++...+
T Consensus 86 ~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 126 (226)
T 1i1n_A 86 SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDD 126 (226)
T ss_dssp CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHC
T ss_pred CCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Confidence 999999999999876567899999999999999 8887754
No 6
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.76 E-value=5.9e-18 Score=121.31 Aligned_cols=124 Identities=25% Similarity=0.334 Sum_probs=105.1
Q ss_pred cccccccchhhhcCCCCCHHHHHHHHhCCCCCCCCCC-CCccccccccccCCCCcccchHHHHHHHHHHhcccCCCCEEE
Q psy7827 5 KIFMVPTDYIVEIDSIKSPRVIDAMIHIDRGHFCAHN-DSRKYMLAARDIGYGSIIDNPVQHAEVLELLKDKLVPGAKVL 83 (140)
Q Consensus 5 ~~~m~~~~~l~~~~~~~~~~~~~a~~~~~r~~f~~~~-~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vL 83 (140)
|..|++ +|+..+.+.++.+.++|..+||+.|.+.. ....|.+.+..+..+..+..+.+...+++.+. +.++.+||
T Consensus 21 ~~~l~~--~l~~~~~~~~~~~~~a~~~v~r~~f~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~vL 96 (235)
T 1jg1_A 21 WMRTVE--MLKAEGIIRSKEVERAFLKYPRYLSVEDKYKKYAHIDEPLPIPAGQTVSAPHMVAIMLEIAN--LKPGMNIL 96 (235)
T ss_dssp HHHHHH--HHHHTTSCCSHHHHHHHHHSCGGGGSCGGGGGGTTSSSCEECSTTCEECCHHHHHHHHHHHT--CCTTCCEE
T ss_pred HHHHHH--HHHhcCCCCCHHHHHHHHhCCHhhhCCchhhhcCccCCCcccCCCceeccHHHHHHHHHhcC--CCCCCEEE
Confidence 445774 78756667899999999999999998775 45678899999999999889999999999887 78899999
Q ss_pred EEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 84 DVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 84 DiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
|+|||+|.++..+++..+ .+++++|+++.+++.| +++...++. +++++.
T Consensus 97 diG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~----~v~~~~ 146 (235)
T 1jg1_A 97 EVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVK----NVHVIL 146 (235)
T ss_dssp EECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCC----SEEEEE
T ss_pred EEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCC----CcEEEE
Confidence 999999999999999973 5699999999999999 988877653 355544
No 7
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.74 E-value=1.2e-17 Score=124.94 Aligned_cols=124 Identities=27% Similarity=0.410 Sum_probs=102.6
Q ss_pred cccccccchhhhcCCCCCHHHHHHHHhCCCCCCCCCCC--Ccccccccc-ccCCC---CcccchHHHHHHHHHHhcccCC
Q psy7827 5 KIFMVPTDYIVEIDSIKSPRVIDAMIHIDRGHFCAHND--SRKYMLAAR-DIGYG---SIIDNPVQHAEVLELLKDKLVP 78 (140)
Q Consensus 5 ~~~m~~~~~l~~~~~~~~~~~~~a~~~~~r~~f~~~~~--~~~y~~~~~-~~~~~---~~~~~~~~~~~~~~~l~~~~~~ 78 (140)
|+.|+ ++|++++ +++ ++.++|..+||+.|.+... ...|.+.+. .+..+ +....+.....+++.+. +.+
T Consensus 2 ~~~~~--~~l~~~g-i~~-~v~~a~~~vpr~~fl~~~~~y~~~y~~~~~~~l~~~~f~q~~~~~~~~~~l~~~l~--~~~ 75 (317)
T 1dl5_A 2 REKLF--WILKKYG-VSD-HIAKAFLEIPREEFLTKSYPLSYVYEDIVLVSYDDGEEYSTSSQPSLMALFMEWVG--LDK 75 (317)
T ss_dssp HHHHH--HHHHHTT-CCH-HHHHHHHHSCGGGGCSSCCCHHHHTSSSCEEEEECSSCEEEECCHHHHHHHHHHTT--CCT
T ss_pred hHHHH--HHHHHcC-ChH-HHHHHHHhCCHHHhCCchhccccCccCCCcccccCCCcceeccCHHHHHHHHHhcC--CCC
Confidence 44455 5999999 567 9999999999999987753 356777777 77777 77778888888888887 788
Q ss_pred CCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
+.+|||+|||+|.++..+++.+...++|+|+|+|+++++.| +++...++. ++++++
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~----~v~~~~ 132 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE----NVIFVC 132 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC----SEEEEE
T ss_pred cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CeEEEE
Confidence 99999999999999999999875457899999999999999 998877763 366554
No 8
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.71 E-value=1.9e-17 Score=117.95 Aligned_cols=110 Identities=27% Similarity=0.292 Sum_probs=94.2
Q ss_pred ccccccccchhhhcCCCCCHHHHHHHHhCCCCCCCCCC-CCcccc--ccccccCCCCcccchHHHHHHHHHHhcccCCCC
Q psy7827 4 YKIFMVPTDYIVEIDSIKSPRVIDAMIHIDRGHFCAHN-DSRKYM--LAARDIGYGSIIDNPVQHAEVLELLKDKLVPGA 80 (140)
Q Consensus 4 ~~~~m~~~~~l~~~~~~~~~~~~~a~~~~~r~~f~~~~-~~~~y~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 80 (140)
.|..|++ ++|+ ++++.++|..+||+.|.+.. ....|. +.+..+..++.+..+.+...+++.+. +.++.
T Consensus 2 ar~~~~~-~~~~------~~~v~~a~~~v~r~~f~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 72 (231)
T 1vbf_A 2 SEKEEIL-RKIK------TQELAEAFNKVDRSLFLPENLKDYAYAHTHEALPILPGINTTALNLGIFMLDELD--LHKGQ 72 (231)
T ss_dssp CHHHHHH-HHCC------CHHHHHHHHHSCHHHHSCGGGGGGSSSSTTCCEEEETTEEECCHHHHHHHHHHTT--CCTTC
T ss_pred cHHHHHH-HHhC------CHHHHHHHHhCCHHHcCCcchhhhccccCCCceeeCCCCccCCHHHHHHHHHhcC--CCCCC
Confidence 3566774 7775 89999999999999987764 456788 88888888888888888999988887 78889
Q ss_pred EEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 81 KVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 81 ~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
+|||+|||+|.++..+++.+ .+++|+|+++.+++.| +++...
T Consensus 73 ~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~ 115 (231)
T 1vbf_A 73 KVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYY 115 (231)
T ss_dssp EEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTC
T ss_pred EEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhc
Confidence 99999999999999999985 4699999999999999 877654
No 9
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.49 E-value=1.7e-13 Score=99.97 Aligned_cols=74 Identities=15% Similarity=0.273 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhC-CCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 63 VQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVG-KNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 63 ~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.+.+.+..++...++++.+|||+|||+|..+..+++.+. ++.+|+|||+|+.|++.| +++...+. ..+|+++++
T Consensus 55 ~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~---~~~v~~~~~ 130 (261)
T 4gek_A 55 NIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA---PTPVDVIEG 130 (261)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC---SSCEEEEES
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc---CceEEEeec
Confidence 344444445554578999999999999999999999864 355899999999999999 98887765 357887765
No 10
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.37 E-value=6.1e-12 Score=88.37 Aligned_cols=74 Identities=20% Similarity=0.319 Sum_probs=61.4
Q ss_pred cccchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEE
Q psy7827 58 IIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKF 136 (140)
Q Consensus 58 ~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~ 136 (140)
.+..+.+...++..+. +.++.+|||+|||+|.++..+++. .++|+|+|+|+.+++.| +++...++ .+++++
T Consensus 37 ~~~~~~~~~~~l~~l~--~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~---~~~v~~ 108 (204)
T 3njr_A 37 QITKSPMRALTLAALA--PRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGL---SPRMRA 108 (204)
T ss_dssp CCCCHHHHHHHHHHHC--CCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEE
T ss_pred CCCcHHHHHHHHHhcC--CCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCC---CCCEEE
Confidence 4455667777788887 788999999999999999999988 34799999999999999 99888876 346777
Q ss_pred eec
Q psy7827 137 ICE 139 (140)
Q Consensus 137 ~~g 139 (140)
+++
T Consensus 109 ~~~ 111 (204)
T 3njr_A 109 VQG 111 (204)
T ss_dssp EES
T ss_pred EeC
Confidence 654
No 11
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.36 E-value=3.2e-12 Score=87.82 Aligned_cols=66 Identities=17% Similarity=0.216 Sum_probs=52.6
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 66 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
.....++...++++.+|||+|||+|.++..+++. .++|+|+|+|+.|++.| +++...++. ++++++
T Consensus 10 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~----~v~~~~ 76 (185)
T 3mti_A 10 HMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIE----NTELIL 76 (185)
T ss_dssp HHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCC----CEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCC----cEEEEe
Confidence 3444444444678999999999999999999987 45799999999999999 998887753 566654
No 12
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.35 E-value=2.4e-12 Score=92.06 Aligned_cols=61 Identities=25% Similarity=0.257 Sum_probs=53.5
Q ss_pred ccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 75 KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.++++.+|||||||+|++++.+++.. +.++|+|+|+++.+++.| +|+..+++ .++|+++++
T Consensus 12 ~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl---~~~i~~~~~ 73 (225)
T 3kr9_A 12 FVSQGAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAHGL---KEKIQVRLA 73 (225)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTC---TTTEEEEEC
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEEC
Confidence 46788999999999999999999984 566899999999999999 99999998 457888764
No 13
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.35 E-value=9.7e-12 Score=86.78 Aligned_cols=73 Identities=18% Similarity=0.317 Sum_probs=60.8
Q ss_pred cchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 60 DNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 60 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
....+...++..+. +.++.+|||+|||+|.++..+++.. +.++++|+|+|+.+++.| +++...++. ++++++
T Consensus 24 ~~~~i~~~~l~~l~--~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~v~~~~ 96 (204)
T 3e05_A 24 TKQEVRAVTLSKLR--LQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVAR----NVTLVE 96 (204)
T ss_dssp CCHHHHHHHHHHTT--CCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCT----TEEEEE
T ss_pred ChHHHHHHHHHHcC--CCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCC----cEEEEe
Confidence 45666677788877 7889999999999999999999985 567899999999999999 998877753 566654
Q ss_pred c
Q psy7827 139 E 139 (140)
Q Consensus 139 g 139 (140)
+
T Consensus 97 ~ 97 (204)
T 3e05_A 97 A 97 (204)
T ss_dssp C
T ss_pred C
Confidence 3
No 14
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.34 E-value=8.5e-12 Score=86.47 Aligned_cols=61 Identities=28% Similarity=0.489 Sum_probs=52.3
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
++++.+|||+|||+|.++..+++.+++.++++|+|+++.+++.| +++..+++ ..+++++++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~v~~~~~ 81 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL---IDRVTLIKD 81 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC---GGGEEEECS
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCCeEEEEC
Confidence 77889999999999999999999976667899999999999999 99888766 245666553
No 15
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.34 E-value=3.4e-12 Score=91.54 Aligned_cols=61 Identities=25% Similarity=0.280 Sum_probs=53.7
Q ss_pred ccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 75 KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.++++.+|||||||+|++++.+++.. +..+|+|+|+++.+++.| +|+..+++ .++|++++|
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~~al~~A~~N~~~~gl---~~~I~~~~g 79 (230)
T 3lec_A 18 YVPKGARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVNGPYQSALKNVSEHGL---TSKIDVRLA 79 (230)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSHHHHHHHHHHHHHTTC---TTTEEEEEC
T ss_pred hCCCCCEEEEECCchHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEEC
Confidence 46788999999999999999999984 556799999999999999 99999988 467888765
No 16
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.33 E-value=3.3e-12 Score=92.33 Aligned_cols=61 Identities=15% Similarity=0.180 Sum_probs=53.3
Q ss_pred ccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 75 KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.++++.+|||||||+|++++.+++.. +..+|+|+|+++.+++.| +|+..+++ .++|++++|
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl---~~~I~v~~g 79 (244)
T 3gnl_A 18 YITKNERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVDGPFQSAQKQVRSSGL---TEQIDVRKG 79 (244)
T ss_dssp TCCSSEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTC---TTTEEEEEC
T ss_pred hCCCCCEEEEECCccHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEec
Confidence 46788999999999999999999984 556799999999999999 99999988 457887764
No 17
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.33 E-value=7.4e-12 Score=93.95 Aligned_cols=100 Identities=20% Similarity=0.233 Sum_probs=78.9
Q ss_pred HHHHHHHhCCCCCCCCCC------CCccccccccccCCCCcccchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHH
Q psy7827 24 RVIDAMIHIDRGHFCAHN------DSRKYMLAARDIGYGSIIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFA 97 (140)
Q Consensus 24 ~~~~a~~~~~r~~f~~~~------~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la 97 (140)
...+++...+++.|.+.. ....|.+.......+..+..+.....+++.+. +.++.+|||+|||+|.++..++
T Consensus 47 ~~~~~ig~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~l~--~~~g~~VLDiG~G~G~~~~~la 124 (336)
T 2b25_A 47 PFGKIVGKFPGQILRSSFGKQYMLRRPALEDYVVLMKRGTAITFPKDINMILSMMD--INPGDTVLEAGSGSGGMSLFLS 124 (336)
T ss_dssp BHHHHTTCCTTEEEECTTSCEEEEECCCHHHHHHHSCCSSCCCCHHHHHHHHHHHT--CCTTCEEEEECCTTSHHHHHHH
T ss_pred eHHHHcCCCCCceEEeCCCcEEEecCCCHHHHhhhhcCCCcccCHHHHHHHHHhcC--CCCCCEEEEeCCCcCHHHHHHH
Confidence 356666777777665443 13345555556667777778887888888887 8899999999999999999999
Q ss_pred HHhCCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 98 HMVGKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 98 ~~~~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
+.+++.++|+|+|+++.+++.| +++...
T Consensus 125 ~~~g~~~~v~~vD~~~~~~~~a~~~~~~~ 153 (336)
T 2b25_A 125 KAVGSQGRVISFEVRKDHHDLAKKNYKHW 153 (336)
T ss_dssp HHHCTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred HHhCCCceEEEEeCCHHHHHHHHHHHHHh
Confidence 9876667899999999999999 888753
No 18
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.32 E-value=6.6e-12 Score=88.88 Aligned_cols=73 Identities=11% Similarity=0.203 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.....+...+. ..++.+|||+|||+|..+..+++..++.++|+++|+++.+++.| +++...++ .++|+++++
T Consensus 44 ~~~~~~l~~l~~--~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~ 117 (221)
T 3u81_A 44 DAKGQIMDAVIR--EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL---QDKVTILNG 117 (221)
T ss_dssp HHHHHHHHHHHH--HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC---GGGEEEEES
T ss_pred HHHHHHHHHHHH--hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC---CCceEEEEC
Confidence 334444444444 45778999999999999999999876678999999999999999 99998887 356888765
No 19
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.30 E-value=1.3e-11 Score=87.90 Aligned_cols=59 Identities=12% Similarity=0.251 Sum_probs=51.6
Q ss_pred CCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.+|||+|||+|+.+..+++..+++++|+++|+++.+++.| +++...++. .++|++++|
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~--~~~i~~~~g 116 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYS--PSRVRFLLS 116 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCC--GGGEEEECS
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--cCcEEEEEc
Confidence 44999999999999999999876678999999999999999 999988873 157888765
No 20
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.30 E-value=8.3e-12 Score=89.72 Aligned_cols=51 Identities=24% Similarity=0.487 Sum_probs=47.1
Q ss_pred ccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 75 KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
.+++|++|||+|||+|+++..+++.+++.|+|+|+|+++.|++.+ +++.+.
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~ 125 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR 125 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh
Confidence 378999999999999999999999999999999999999999999 776553
No 21
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.30 E-value=1.3e-11 Score=88.15 Aligned_cols=74 Identities=19% Similarity=0.390 Sum_probs=60.9
Q ss_pred cchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 60 DNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 60 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
..+.....+...+. ..++.+|||+|||+|..+..+++.. +.++|+++|+++.+++.| +++...++ .++|++++
T Consensus 55 ~~~~~~~~l~~~~~--~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~ 128 (232)
T 3ntv_A 55 VDRLTLDLIKQLIR--MNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHF---ENQVRIIE 128 (232)
T ss_dssp CCHHHHHHHHHHHH--HHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTC---TTTEEEEE
T ss_pred cCHHHHHHHHHHHh--hcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEE
Confidence 35666666666666 5678899999999999999999854 567899999999999999 99988877 35788876
Q ss_pred c
Q psy7827 139 E 139 (140)
Q Consensus 139 g 139 (140)
+
T Consensus 129 ~ 129 (232)
T 3ntv_A 129 G 129 (232)
T ss_dssp S
T ss_pred C
Confidence 4
No 22
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.30 E-value=2.6e-11 Score=87.24 Aligned_cols=75 Identities=27% Similarity=0.431 Sum_probs=61.8
Q ss_pred cchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 60 DNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 60 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
..+.....++..+. +.++.+|||+|||+|.++..+++..++.++++++|+++.+++.| +++...++. +++++++
T Consensus 77 ~~~~~~~~i~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~---~~v~~~~ 151 (255)
T 3mb5_A 77 VHPKDAALIVAYAG--ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFD---DRVTIKL 151 (255)
T ss_dssp CCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCT---TTEEEEC
T ss_pred ccHhHHHHHHHhhC--CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCC---CceEEEE
Confidence 34555667777776 78899999999999999999999966678899999999999999 999888763 4577665
Q ss_pred c
Q psy7827 139 E 139 (140)
Q Consensus 139 g 139 (140)
+
T Consensus 152 ~ 152 (255)
T 3mb5_A 152 K 152 (255)
T ss_dssp S
T ss_pred C
Confidence 3
No 23
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.29 E-value=9.8e-12 Score=84.52 Aligned_cols=66 Identities=21% Similarity=0.241 Sum_probs=55.9
Q ss_pred ccchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 59 IDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 59 ~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
+....+...+++.+. +.++.+|||+|||+|.++..+++.. +..+++|+|+|+.+++.| +++...+.
T Consensus 8 ~t~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~ 74 (178)
T 3hm2_A 8 LTKQHVRALAISALA--PKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGV 74 (178)
T ss_dssp SHHHHHHHHHHHHHC--CCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTC
T ss_pred ccHHHHHHHHHHHhc--ccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCC
Confidence 344556777777776 7788999999999999999999886 467899999999999999 88887766
No 24
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.29 E-value=2.4e-11 Score=87.23 Aligned_cols=72 Identities=25% Similarity=0.416 Sum_probs=58.8
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.+.....+++.+. +.++.+|||+|||+|.++..+++.. ..+++|+|+|+.|++.| +++...++ ..+|+++++
T Consensus 21 ~~~~~~~l~~~~~--~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~---~~~v~~~~~ 93 (256)
T 1nkv_A 21 TEEKYATLGRVLR--MKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGV---SERVHFIHN 93 (256)
T ss_dssp CHHHHHHHHHHTC--CCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEES
T ss_pred CHHHHHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCC---CcceEEEEC
Confidence 3455677777776 7889999999999999999999986 34799999999999999 88887776 346776653
No 25
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.28 E-value=2.3e-11 Score=89.61 Aligned_cols=87 Identities=21% Similarity=0.223 Sum_probs=63.6
Q ss_pred ccccccccCCCCcccch---HHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hc
Q psy7827 46 YMLAARDIGYGSIIDNP---VQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SN 121 (140)
Q Consensus 46 y~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~ 121 (140)
|....+.+..+..+..+ .+...+++.+. ..++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.| +|
T Consensus 90 f~~~~~~v~~~~lipr~~te~lv~~~l~~~~--~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n 165 (284)
T 1nv8_A 90 FMGLSFLVEEGVFVPRPETEELVELALELIR--KYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKN 165 (284)
T ss_dssp ETTEEEECCTTSCCCCTTHHHHHHHHHHHHH--HHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHH
T ss_pred ECCeEEEeCCCceecChhHHHHHHHHHHHhc--ccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHH
Confidence 34444444444444444 33444555543 346789999999999999999998 567899999999999999 99
Q ss_pred hhhcCCCCCCCcEEEeec
Q psy7827 122 VTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 122 ~~~~~~~~~~~~i~~~~g 139 (140)
+..+++ .++++|+++
T Consensus 166 ~~~~~l---~~~v~~~~~ 180 (284)
T 1nv8_A 166 AERHGV---SDRFFVRKG 180 (284)
T ss_dssp HHHTTC---TTSEEEEES
T ss_pred HHHcCC---CCceEEEEC
Confidence 988877 346888764
No 26
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.28 E-value=4.2e-11 Score=81.40 Aligned_cols=71 Identities=21% Similarity=0.261 Sum_probs=58.3
Q ss_pred cchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 60 DNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 60 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
..+.+...+++.+. +.++.+|||+|||+|.++..+++ +..+++|+|+++.+++.| +++...++. ++++++
T Consensus 19 ~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~~~~~ 89 (183)
T 2yxd_A 19 TKEEIRAVSIGKLN--LNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIK----NCQIIK 89 (183)
T ss_dssp CCHHHHHHHHHHHC--CCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCC----SEEEEE
T ss_pred CHHHHHHHHHHHcC--CCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCC----cEEEEE
Confidence 34666777778776 77889999999999999999988 345799999999999999 998887753 576665
Q ss_pred c
Q psy7827 139 E 139 (140)
Q Consensus 139 g 139 (140)
+
T Consensus 90 ~ 90 (183)
T 2yxd_A 90 G 90 (183)
T ss_dssp S
T ss_pred C
Confidence 3
No 27
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.28 E-value=1.9e-11 Score=86.33 Aligned_cols=73 Identities=21% Similarity=0.290 Sum_probs=57.7
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.....+...+. ..++.+|||+|||+|..+..+++..++.++|+++|+++.+++.| +++...++ ..+|+++++
T Consensus 50 ~~~~~~l~~l~~--~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~ 123 (225)
T 3tr6_A 50 PEQAQLLALLVK--LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL---SDKIGLRLS 123 (225)
T ss_dssp HHHHHHHHHHHH--HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEES
T ss_pred HHHHHHHHHHHH--hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC---CCceEEEeC
Confidence 433344434444 45778999999999999999999875567899999999999999 99988887 356888764
No 28
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.27 E-value=1.9e-11 Score=86.36 Aligned_cols=73 Identities=25% Similarity=0.360 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.....+..++. ..++.+|||+|||+|..+..+++..++.++++++|+++.+++.| +++...++ ..+|+++++
T Consensus 44 ~~~~~~l~~l~~--~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~ 117 (223)
T 3duw_A 44 PTQGKFLQLLVQ--IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL---NDRVEVRTG 117 (223)
T ss_dssp HHHHHHHHHHHH--HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEES
T ss_pred HHHHHHHHHHHH--hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEEc
Confidence 333333333334 45788999999999999999999875467899999999999999 99988887 356888765
No 29
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.26 E-value=3e-11 Score=86.42 Aligned_cols=76 Identities=18% Similarity=0.277 Sum_probs=61.3
Q ss_pred ccchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEe
Q psy7827 59 IDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFI 137 (140)
Q Consensus 59 ~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~ 137 (140)
...+.....+...+. ..++.+|||+|||+|..+..+++..++.++++++|+++.+++.| +++...+. ..+|+++
T Consensus 43 ~~~~~~~~~l~~l~~--~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~---~~~v~~~ 117 (239)
T 2hnk_A 43 QISPEEGQFLNILTK--ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL---ENKIFLK 117 (239)
T ss_dssp SCCHHHHHHHHHHHH--HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC---GGGEEEE
T ss_pred ccCHHHHHHHHHHHH--hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCCEEEE
Confidence 445666666666665 56788999999999999999999975467899999999999999 99888776 3457776
Q ss_pred ec
Q psy7827 138 CE 139 (140)
Q Consensus 138 ~g 139 (140)
++
T Consensus 118 ~~ 119 (239)
T 2hnk_A 118 LG 119 (239)
T ss_dssp ES
T ss_pred EC
Confidence 54
No 30
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.26 E-value=2.9e-11 Score=84.89 Aligned_cols=67 Identities=33% Similarity=0.563 Sum_probs=55.5
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 66 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
..+++.+. +.++.+|||+|||+|.++..+++..++..+++|+|+|+.+++.| +++...++. ++++++
T Consensus 27 ~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~~~~~ 94 (219)
T 3dh0_A 27 EKVLKEFG--LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK----NVEVLK 94 (219)
T ss_dssp HHHHHHHT--CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT----TEEEEE
T ss_pred HHHHHHhC--CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC----cEEEEe
Confidence 55666666 77889999999999999999999986667899999999999999 888777653 455543
No 31
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.26 E-value=2.5e-11 Score=87.66 Aligned_cols=74 Identities=16% Similarity=0.243 Sum_probs=59.2
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.+.....+...+. ..++.+|||||||+|+.+..+++...++++++++|+++.+++.| +++...++ ..+|++++|
T Consensus 64 ~~~~~~ll~~l~~--~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~---~~~i~~~~g 138 (247)
T 1sui_A 64 SADEGQFLSMLLK--LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV---DHKIDFREG 138 (247)
T ss_dssp CHHHHHHHHHHHH--HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC---GGGEEEEES
T ss_pred CHHHHHHHHHHHH--hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCCeEEEEC
Confidence 3444444444444 55778999999999999999999975578999999999999999 99988877 457888765
No 32
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.26 E-value=2.5e-11 Score=87.57 Aligned_cols=61 Identities=20% Similarity=0.326 Sum_probs=53.5
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.++.+|||||||+|..+..+++..++.++|+++|+++.+++.| +++...++ ..+|+++++
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~---~~~v~~~~~ 122 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV---DQRVTLREG 122 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC---TTTEEEEES
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEEc
Confidence 55788999999999999999999875578999999999999999 99988887 357888765
No 33
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.24 E-value=5.5e-11 Score=84.58 Aligned_cols=75 Identities=24% Similarity=0.426 Sum_probs=61.0
Q ss_pred ccchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEe
Q psy7827 59 IDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFI 137 (140)
Q Consensus 59 ~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~ 137 (140)
+.++.....+...+. ..++.+|||+|||+|..+..+++.. +.++|+++|+++.+++.| +++...+. ..+|+++
T Consensus 37 ~~~~~~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~ 110 (233)
T 2gpy_A 37 IMDLLGMESLLHLLK--MAAPARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALGL---ESRIELL 110 (233)
T ss_dssp CCCHHHHHHHHHHHH--HHCCSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTTC---TTTEEEE
T ss_pred CcCHHHHHHHHHHHh--ccCCCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEE
Confidence 445666777777766 6678899999999999999999986 467899999999999999 99888776 3457766
Q ss_pred ec
Q psy7827 138 CE 139 (140)
Q Consensus 138 ~g 139 (140)
++
T Consensus 111 ~~ 112 (233)
T 2gpy_A 111 FG 112 (233)
T ss_dssp CS
T ss_pred EC
Confidence 53
No 34
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.24 E-value=6.9e-11 Score=81.57 Aligned_cols=73 Identities=19% Similarity=0.146 Sum_probs=56.1
Q ss_pred chHHHHHHHHHHhcc-cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 61 NPVQHAEVLELLKDK-LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
...+...+.+.+... ..++.+|||+|||+|.++..++... ..+|+|+|+|+.|++.| +++..+++ .++++++
T Consensus 26 ~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~----~~v~~~~ 99 (189)
T 3p9n_A 26 TDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRG--AASVLFVESDQRSAAVIARNIEALGL----SGATLRR 99 (189)
T ss_dssp CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEECCHHHHHHHHHHHHHHTC----SCEEEEE
T ss_pred cHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCC--CCeEEEEECCHHHHHHHHHHHHHcCC----CceEEEE
Confidence 344556666666521 1578899999999999999887753 34799999999999999 99888776 2577765
Q ss_pred c
Q psy7827 139 E 139 (140)
Q Consensus 139 g 139 (140)
+
T Consensus 100 ~ 100 (189)
T 3p9n_A 100 G 100 (189)
T ss_dssp S
T ss_pred c
Confidence 4
No 35
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.24 E-value=6e-12 Score=90.70 Aligned_cols=73 Identities=22% Similarity=0.309 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.....+...+. ..++.+|||+|||+|..+..+++..+++++|+++|+++.+++.| +++...++ .++|++++|
T Consensus 46 ~~~~~~l~~l~~--~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~---~~~i~~~~g 119 (242)
T 3r3h_A 46 PEQAQFMQMLIR--LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ---EHKIKLRLG 119 (242)
T ss_dssp HHHHHHHHHHHH--HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC---TTTEEEEES
T ss_pred HHHHHHHHHHHh--hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEEc
Confidence 444444444444 45678999999999999999999876678999999999999999 99998887 467888775
No 36
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.24 E-value=4.2e-11 Score=84.23 Aligned_cols=75 Identities=21% Similarity=0.290 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCC-CCcEEEeec
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKL-NKRIKFICE 139 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~-~~~i~~~~g 139 (140)
+.....+.+.+. ..++.+|||+|||+|.++..+++.. +..+++|+|+|+.+++.| +++...++... ..+++++++
T Consensus 15 ~~~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 91 (217)
T 3jwh_A 15 QQRMNGVVAALK--QSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQG 91 (217)
T ss_dssp HHHHHHHHHHHH--HTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEEC
T ss_pred HHHHHHHHHHHH--hcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeC
Confidence 344566667666 5678899999999999999999875 446899999999999999 88876665210 125666553
No 37
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.24 E-value=6.7e-11 Score=84.83 Aligned_cols=61 Identities=21% Similarity=0.307 Sum_probs=53.6
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
..++.+|||||||+|+.+..+++..+++++++++|+++.+++.| +++...++ ..+|++++|
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~---~~~i~~~~g 129 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV---EHKINFIES 129 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC---GGGEEEEES
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEEc
Confidence 45778999999999999999999975578999999999999999 99988877 457888765
No 38
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.23 E-value=4.1e-11 Score=88.39 Aligned_cols=67 Identities=21% Similarity=0.278 Sum_probs=54.7
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 66 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
..+++.+. +.++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.| +++...++ .++|+++++
T Consensus 62 ~~~~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~ 129 (302)
T 3hem_A 62 KLALDKLN--LEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDS---PRRKEVRIQ 129 (302)
T ss_dssp HHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCC---SSCEEEEEC
T ss_pred HHHHHHcC--CCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCC---CCceEEEEC
Confidence 33444444 67889999999999999999999864 5799999999999999 99888776 456777654
No 39
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.23 E-value=8e-11 Score=79.35 Aligned_cols=64 Identities=23% Similarity=0.142 Sum_probs=51.0
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
...+...+...+...++++.+|||+|||+|.++..+++... +++|+|+|+.+++.| +++...+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~ 88 (171)
T 1ws6_A 24 PVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGL 88 (171)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCC
Confidence 34556666666652233788999999999999999998853 399999999999999 88877654
No 40
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.23 E-value=8.7e-11 Score=84.58 Aligned_cols=58 Identities=17% Similarity=0.170 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
++.+|||+|||+|.++..++... +.++++|+|+|+.|++.| +++..+++ ..+|+++++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~ 123 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNL---SDLIKVVKV 123 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEEC
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCC---CccEEEEEc
Confidence 56799999999999999998876 346899999999999999 99888776 345777654
No 41
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.22 E-value=3.2e-11 Score=88.87 Aligned_cols=71 Identities=24% Similarity=0.386 Sum_probs=58.5
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.+.+.+.+++.+. +.++.+|||+|||+|.++..+++... +|+|+|+|+.|++.+ +++...+. ..+++++++
T Consensus 13 d~~i~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~ 84 (285)
T 1zq9_A 13 NPLIINSIIDKAA--LRPTDVVLEVGPGTGNMTVKLLEKAK---KVVACELDPRLVAELHKRVQGTPV---ASKLQVLVG 84 (285)
T ss_dssp CHHHHHHHHHHTC--CCTTCEEEEECCTTSTTHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTSTT---GGGEEEEES
T ss_pred CHHHHHHHHHhcC--CCCCCEEEEEcCcccHHHHHHHhhCC---EEEEEECCHHHHHHHHHHHHhcCC---CCceEEEEc
Confidence 6778888888887 77889999999999999999999853 699999999999999 88765543 235666654
No 42
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.22 E-value=3.7e-11 Score=84.81 Aligned_cols=58 Identities=17% Similarity=0.289 Sum_probs=49.4
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.++.+|||||||+|.++..+++.. ++.+++|||+|+.+++.| +++...++. +|+++++
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~----nv~~~~~ 95 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQ----NVKLLNI 95 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCS----SEEEECC
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCC----CEEEEeC
Confidence 357899999999999999999985 567899999999999999 998887763 4776654
No 43
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.22 E-value=4.2e-11 Score=85.06 Aligned_cols=58 Identities=16% Similarity=0.257 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.++.+|||||||+|.++..+++.. ++.+|+|||+|+.+++.| +++...++. +|+++++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~----nv~~~~~ 91 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLS----NLRVMCH 91 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCS----SEEEECS
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCC----cEEEEEC
Confidence 467899999999999999999985 667899999999999999 998888764 4777654
No 44
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.22 E-value=3.6e-11 Score=84.29 Aligned_cols=61 Identities=20% Similarity=0.217 Sum_probs=51.6
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
..++.+|||+|||+|..+..+++..++.++|+++|+|+.+++.| +++...++ ..+|+++++
T Consensus 54 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~ 115 (210)
T 3c3p_A 54 IKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL---IDRVELQVG 115 (210)
T ss_dssp HHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG---GGGEEEEES
T ss_pred hhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC---CceEEEEEe
Confidence 34678999999999999999999875467899999999999999 99888776 356777764
No 45
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.22 E-value=7e-11 Score=83.63 Aligned_cols=73 Identities=21% Similarity=0.224 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.....+...+. ..++.+|||+|||+|..+..+++..++.++++++|+++.+++.| +++...++ ..+|+++++
T Consensus 55 ~~~~~~l~~l~~--~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~---~~~i~~~~~ 128 (229)
T 2avd_A 55 CEQAQLLANLAR--LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA---EHKIDLRLK 128 (229)
T ss_dssp HHHHHHHHHHHH--HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC---TTTEEEEES
T ss_pred HHHHHHHHHHHH--hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC---CCeEEEEEc
Confidence 334444444444 56788999999999999999999875467899999999999999 99888876 357887764
No 46
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.21 E-value=4.3e-11 Score=86.80 Aligned_cols=70 Identities=24% Similarity=0.486 Sum_probs=55.9
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHH------HHHHH-hchhhcCCCCCCCcEEE
Q psy7827 64 QHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPE------IVNHA-SNVTTLHYPKLNKRIKF 136 (140)
Q Consensus 64 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~------~i~~a-~~~~~~~~~~~~~~i~~ 136 (140)
....+++.+. +.++.+|||||||+|.++..+++.+++.++++|+|+|+. +++.| +++...++ ..+|++
T Consensus 31 ~~~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~---~~~v~~ 105 (275)
T 3bkx_A 31 HRLAIAEAWQ--VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL---GDRLTV 105 (275)
T ss_dssp HHHHHHHHHT--CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT---GGGEEE
T ss_pred HHHHHHHHcC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC---CCceEE
Confidence 3455556665 788999999999999999999999755678999999997 99999 88877655 235666
Q ss_pred ee
Q psy7827 137 IC 138 (140)
Q Consensus 137 ~~ 138 (140)
++
T Consensus 106 ~~ 107 (275)
T 3bkx_A 106 HF 107 (275)
T ss_dssp EC
T ss_pred EE
Confidence 54
No 47
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.21 E-value=1.3e-10 Score=84.70 Aligned_cols=68 Identities=34% Similarity=0.546 Sum_probs=57.1
Q ss_pred CCcccchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 56 GSIIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 56 ~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
+..+..+.....++..+. +.++.+|||+|||+|.++..+++..++.++++++|+++.+++.| +++...
T Consensus 79 ~~~~~~~~~~~~i~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~ 147 (280)
T 1i9g_A 79 GPQVIYPKDAAQIVHEGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGC 147 (280)
T ss_dssp CSCCCCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH
T ss_pred cceeecHHHHHHHHHHcC--CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHh
Confidence 334445666677777776 78899999999999999999999866677899999999999999 888766
No 48
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.21 E-value=6e-11 Score=83.43 Aligned_cols=75 Identities=24% Similarity=0.378 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCC-CCcEEEeec
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKL-NKRIKFICE 139 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~-~~~i~~~~g 139 (140)
+...+.+.+.+. ..++.+|||+|||+|.++..+++.. +..+++|+|+|+.+++.| +++...++... ..+++++++
T Consensus 15 ~~~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 91 (219)
T 3jwg_A 15 QQRLGTVVAVLK--SVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQS 91 (219)
T ss_dssp HHHHHHHHHHHH--HTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEEC
T ss_pred HHHHHHHHHHHh--hcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeC
Confidence 344566666665 5678899999999999999999875 446899999999999999 88776654210 115666543
No 49
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.20 E-value=1.6e-10 Score=78.91 Aligned_cols=72 Identities=18% Similarity=0.229 Sum_probs=58.5
Q ss_pred cchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 60 DNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 60 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
....+...+++.+. +.++.+|||+|||+|.++..+++.. .+++++|+++.+++.+ +++...+. ..++++++
T Consensus 17 ~~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~---~~~~~~~~ 88 (192)
T 1l3i_A 17 TAMEVRCLIMCLAE--PGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGL---GDNVTLME 88 (192)
T ss_dssp CCHHHHHHHHHHHC--CCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTC---CTTEEEEE
T ss_pred ChHHHHHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCC---CcceEEEe
Confidence 35566677777776 7888999999999999999999876 4799999999999999 88887765 24566654
Q ss_pred c
Q psy7827 139 E 139 (140)
Q Consensus 139 g 139 (140)
+
T Consensus 89 ~ 89 (192)
T 1l3i_A 89 G 89 (192)
T ss_dssp S
T ss_pred c
Confidence 3
No 50
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.19 E-value=1e-10 Score=86.75 Aligned_cols=63 Identities=22% Similarity=0.220 Sum_probs=50.3
Q ss_pred HHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 70 ELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 70 ~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.++. ++++++|||||||+|.++..++... ++++|+|||+|++|++.| +++.+.++ .+|+|++|
T Consensus 116 ~la~--l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl----~~v~~v~g 179 (298)
T 3fpf_A 116 ALGR--FRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGV----DGVNVITG 179 (298)
T ss_dssp HHTT--CCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTC----CSEEEEES
T ss_pred HHcC--CCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCC----CCeEEEEC
Confidence 4444 7899999999999998775544443 467899999999999999 99888776 37888765
No 51
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.19 E-value=5e-11 Score=86.70 Aligned_cols=65 Identities=14% Similarity=0.263 Sum_probs=54.1
Q ss_pred CCCcc-cchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 55 YGSII-DNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 55 ~~~~~-~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
+|++. ..+.+.+.+++.+. +.++.+|||||||+|.++..+++.+ ++|+|+|+++.|++.+ +++..
T Consensus 7 ~GQnFL~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~ 73 (255)
T 3tqs_A 7 FGQHFLHDSFVLQKIVSAIH--PQKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQ 73 (255)
T ss_dssp --CCEECCHHHHHHHHHHHC--CCTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTT
T ss_pred CCcccccCHHHHHHHHHhcC--CCCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhh
Confidence 44433 35778889999987 7889999999999999999999875 3699999999999999 87754
No 52
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.19 E-value=1.6e-10 Score=79.06 Aligned_cols=73 Identities=14% Similarity=0.120 Sum_probs=57.0
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
...+...+.+.+.. ..++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.| +++...++ ..+++++++
T Consensus 28 ~~~~~~~~~~~l~~-~~~~~~vLD~GcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~~ 101 (187)
T 2fhp_A 28 TDKVKESIFNMIGP-YFDGGMALDLYSGSGGLAIEAVSRG--MDKSICIEKNFAALKVIKENIAITKE---PEKFEVRKM 101 (187)
T ss_dssp CHHHHHHHHHHHCS-CCSSCEEEETTCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHTC---GGGEEEEES
T ss_pred HHHHHHHHHHHHHh-hcCCCCEEEeCCccCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHhCC---CcceEEEEC
Confidence 44566666776641 3578899999999999999988753 35799999999999999 99888775 346777654
No 53
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.19 E-value=9.8e-11 Score=86.21 Aligned_cols=60 Identities=13% Similarity=0.233 Sum_probs=52.8
Q ss_pred cchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCC-CCeEEEEcCCHHHHHHH-hc
Q psy7827 60 DNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGK-NGSVVGVEHIPEIVNHA-SN 121 (140)
Q Consensus 60 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~~~v~gvD~s~~~i~~a-~~ 121 (140)
..+.+.+.+++.+. +.++.+|||||||+|.++..+++.+.. +++|+|+|+|+.|++.+ ++
T Consensus 26 ~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~ 87 (279)
T 3uzu_A 26 VDHGVIDAIVAAIR--PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQR 87 (279)
T ss_dssp CCHHHHHHHHHHHC--CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcC--CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHh
Confidence 35778888999887 788999999999999999999998754 36699999999999999 77
No 54
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.18 E-value=5.9e-11 Score=82.79 Aligned_cols=57 Identities=14% Similarity=0.071 Sum_probs=49.2
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEE
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKF 136 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~ 136 (140)
+.+.++|||+|||+|.++..++... +..+++|+|+|+.|++.+ +++..+++. .++++
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~-p~a~~~A~Di~~~~leiar~~~~~~g~~---~~v~~ 104 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNEN-EKIIYHAYDIDRAEIAFLSSIIGKLKTT---IKYRF 104 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSS-CCCEEEEECSCHHHHHHHHHHHHHSCCS---SEEEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcC-CCCEEEEEeCCHHHHHHHHHHHHhcCCC---ccEEE
Confidence 5678899999999999999998885 566999999999999999 999888873 35554
No 55
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.18 E-value=8.1e-11 Score=84.03 Aligned_cols=73 Identities=19% Similarity=0.258 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.....+...+. ..++.+|||+|||+|+.+..+++..++.++++++|+++.+++.| +++...++ ..+|+++++
T Consensus 58 ~~~~~~l~~l~~--~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~---~~~i~~~~~ 131 (232)
T 3cbg_A 58 PEQAQFLGLLIS--LTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV---AEKISLRLG 131 (232)
T ss_dssp HHHHHHHHHHHH--HHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC---GGGEEEEES
T ss_pred HHHHHHHHHHHH--hcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEEc
Confidence 333444444443 45678999999999999999999875567899999999999999 99888776 346777664
No 56
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.18 E-value=1.6e-10 Score=81.78 Aligned_cols=50 Identities=22% Similarity=0.298 Sum_probs=45.1
Q ss_pred cCCCCEEEEEcCC-CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 76 LVPGAKVLDVGSG-SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 76 ~~~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
++++.+|||+||| +|.++..+++.. ..+|+|+|+|+.+++.| +++..++.
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~ 104 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS 104 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC
Confidence 6788999999999 999999999986 45799999999999999 99887764
No 57
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.18 E-value=7.7e-11 Score=87.40 Aligned_cols=74 Identities=22% Similarity=0.207 Sum_probs=58.8
Q ss_pred CCC-cccchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCC
Q psy7827 55 YGS-IIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNK 132 (140)
Q Consensus 55 ~~~-~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~ 132 (140)
+|+ .+..+.+.+.+++.+. +.++++|||||||+|.++..+++.. .+|+|||+++.|++.+ +++... .
T Consensus 28 ~GQnfL~d~~i~~~Iv~~l~--~~~~~~VLEIG~G~G~lT~~La~~~---~~V~aVEid~~li~~a~~~~~~~------~ 96 (295)
T 3gru_A 28 LGQCFLIDKNFVNKAVESAN--LTKDDVVLEIGLGKGILTEELAKNA---KKVYVIEIDKSLEPYANKLKELY------N 96 (295)
T ss_dssp --CCEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCGGGHHHHHHHHHHC------S
T ss_pred cCccccCCHHHHHHHHHhcC--CCCcCEEEEECCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHhccC------C
Confidence 444 3446788899999887 7889999999999999999999984 3599999999999999 887621 2
Q ss_pred cEEEeec
Q psy7827 133 RIKFICE 139 (140)
Q Consensus 133 ~i~~~~g 139 (140)
+++++++
T Consensus 97 ~v~vi~g 103 (295)
T 3gru_A 97 NIEIIWG 103 (295)
T ss_dssp SEEEEES
T ss_pred CeEEEEC
Confidence 5666553
No 58
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.18 E-value=4.5e-11 Score=83.77 Aligned_cols=50 Identities=26% Similarity=0.226 Sum_probs=42.4
Q ss_pred HHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 69 LELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 69 ~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
++.+. +.++.+|||+|||+|..+..+++.+ .+|+|||+|+.|++.| ++..
T Consensus 15 ~~~l~--~~~~~~vLD~GCG~G~~~~~la~~g---~~V~gvD~S~~~l~~a~~~~~ 65 (203)
T 1pjz_A 15 WSSLN--VVPGARVLVPLCGKSQDMSWLSGQG---YHVVGAELSEAAVERYFTERG 65 (203)
T ss_dssp HHHHC--CCTTCEEEETTTCCSHHHHHHHHHC---CEEEEEEECHHHHHHHHHHHC
T ss_pred HHhcc--cCCCCEEEEeCCCCcHhHHHHHHCC---CeEEEEeCCHHHHHHHHHHcc
Confidence 44444 6788999999999999999999984 3699999999999999 7653
No 59
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.18 E-value=1.1e-10 Score=79.55 Aligned_cols=70 Identities=19% Similarity=0.201 Sum_probs=54.1
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 64 QHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 64 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+...+.+.+.. ..++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.| +++...++ ..+++++++
T Consensus 18 ~~~~~~~~l~~-~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~~ 88 (177)
T 2esr_A 18 VRGAIFNMIGP-YFNGGRVLDLFAGSGGLAIEAVSRG--MSAAVLVEKNRKAQAIIQDNIIMTKA---ENRFTLLKM 88 (177)
T ss_dssp CHHHHHHHHCS-CCCSCEEEEETCTTCHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHHHTTTC---GGGEEEECS
T ss_pred HHHHHHHHHHh-hcCCCeEEEeCCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCC---CCceEEEEC
Confidence 34555555531 3577899999999999999998873 35799999999999999 98887766 346777654
No 60
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.18 E-value=8e-11 Score=87.55 Aligned_cols=70 Identities=21% Similarity=0.334 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.+.+.+++.+. +.++.+|||+|||+|..+..+++.++ .++|+|+|+|+.|++.| +++..++ .+++++++
T Consensus 12 pvLl~e~l~~L~--~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g-----~~v~~v~~ 82 (301)
T 1m6y_A 12 PVMVREVIEFLK--PEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS-----DRVSLFKV 82 (301)
T ss_dssp CTTHHHHHHHHC--CCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT-----TTEEEEEC
T ss_pred HHHHHHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC-----CcEEEEEC
Confidence 445677788887 77889999999999999999999863 67899999999999999 8887765 26777664
No 61
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.18 E-value=8.3e-11 Score=84.22 Aligned_cols=58 Identities=16% Similarity=0.206 Sum_probs=49.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.++.+|||+|||+|..+..++... +.++|+|+|+|+.|++.| +++...++. +|+++++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~v~~~~~ 127 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLE----NTTFCHD 127 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCS----SEEEEES
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCC----CEEEEec
Confidence 467899999999999999999864 567899999999999999 998888763 4777664
No 62
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.18 E-value=9.1e-11 Score=82.52 Aligned_cols=58 Identities=21% Similarity=0.334 Sum_probs=49.4
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.++.+|||+|||+|.++..+++.. ++.+++|+|+|+.+++.| +++...++. +++++++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~~----~v~~~~~ 98 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGVP----NIKLLWV 98 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCCS----SEEEEEC
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCCC----CEEEEeC
Confidence 467899999999999999999986 567899999999999999 998877753 5666654
No 63
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.17 E-value=7.5e-11 Score=82.96 Aligned_cols=67 Identities=18% Similarity=0.175 Sum_probs=50.2
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-h----chhhcCCCCCCCcEEEeec
Q psy7827 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-S----NVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 66 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~----~~~~~~~~~~~~~i~~~~g 139 (140)
...++.+. +.++.+|||+|||+|.++..+++.. +.++|+|+|+|+.|++.+ + +....+. .+++++++
T Consensus 17 ~~~~~~l~--~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~----~~v~~~~~ 88 (218)
T 3mq2_A 17 DAEFEQLR--SQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGL----PNLLYLWA 88 (218)
T ss_dssp HHHHHHHH--TTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCC----TTEEEEEC
T ss_pred HHHHHHhh--ccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCC----CceEEEec
Confidence 34455665 6788999999999999999999985 567899999999988864 3 3333333 25666653
No 64
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.17 E-value=7.3e-11 Score=85.39 Aligned_cols=58 Identities=17% Similarity=0.211 Sum_probs=50.7
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.++.+|||||||+|..++.++... +.++|+++|+|+.+++.| +++...++. +|+++++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~----~v~~~~~ 137 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLK----GARALWG 137 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCS----SEEEEEC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCC----ceEEEEC
Confidence 467899999999999999999986 567899999999999999 999988874 4777764
No 65
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.17 E-value=4.5e-11 Score=88.70 Aligned_cols=69 Identities=19% Similarity=0.301 Sum_probs=55.0
Q ss_pred CCCCcc-cchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 54 GYGSII-DNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 54 ~~~~~~-~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
.+|+.. ..+.+.+.+++.+. +.++.+|||+|||+|.++..+++.. .+|+|+|+++.|++.+ +++...+.
T Consensus 19 ~~Gq~fl~~~~i~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~La~~~---~~v~~vDi~~~~~~~a~~~~~~~~~ 89 (299)
T 2h1r_A 19 FQGQHLLKNPGILDKIIYAAK--IKSSDIVLEIGCGTGNLTVKLLPLA---KKVITIDIDSRMISEVKKRCLYEGY 89 (299)
T ss_dssp ----CEECCHHHHHHHHHHHC--CCTTCEEEEECCTTSTTHHHHTTTS---SEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred ccccceecCHHHHHHHHHhcC--CCCcCEEEEEcCcCcHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCC
Confidence 345544 36778888888887 7788999999999999999998873 3699999999999999 88766554
No 66
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.17 E-value=9.4e-11 Score=81.99 Aligned_cols=72 Identities=19% Similarity=0.166 Sum_probs=53.8
Q ss_pred HHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 63 VQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 63 ~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.+...+.+.+.. ..++.+|||+|||+|.++..++... ..+|+|+|+|+.|++.| +++..+++. ..+++++++
T Consensus 39 ~~~~~l~~~l~~-~~~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~--~~~v~~~~~ 111 (201)
T 2ift_A 39 RVKETLFNWLMP-YIHQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKCS--SEQAEVINQ 111 (201)
T ss_dssp HHHHHHHHHHHH-HHTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCC--TTTEEEECS
T ss_pred HHHHHHHHHHHH-hcCCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCCC--ccceEEEEC
Confidence 445556666641 1267899999999999999877764 24799999999999999 998887751 135776653
No 67
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.17 E-value=1.2e-10 Score=81.51 Aligned_cols=71 Identities=17% Similarity=0.149 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
..+...+.+.+... .++.+|||+|||+|.++..++.... .+|+|+|+|+.|++.| +++..+++ .+++++++
T Consensus 39 ~~~~~~l~~~l~~~-~~~~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~~----~~v~~~~~ 110 (202)
T 2fpo_A 39 DRVRETLFNWLAPV-IVDAQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLKA----GNARVVNS 110 (202)
T ss_dssp HHHHHHHHHHHHHH-HTTCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTC----CSEEEECS
T ss_pred HHHHHHHHHHHHhh-cCCCeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcCC----CcEEEEEC
Confidence 44555566666511 2678999999999999998877642 3799999999999999 99888775 25666653
No 68
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.16 E-value=1e-10 Score=84.73 Aligned_cols=70 Identities=20% Similarity=0.338 Sum_probs=54.6
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 64 QHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 64 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
....++..+. .+.++.+|||||||+|.++..+++. +.++++|+|+|+.+++.| +++...++ ..+++++++
T Consensus 33 ~~~~~l~~l~-~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~ 103 (267)
T 3kkz_A 33 VTLKALSFID-NLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGL---QNRVTGIVG 103 (267)
T ss_dssp HHHHHHTTCC-CCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEEC
T ss_pred HHHHHHHhcc-cCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCC---CcCcEEEEc
Confidence 3444444443 3567899999999999999999988 355899999999999999 98888776 345776653
No 69
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.16 E-value=3.5e-10 Score=81.16 Aligned_cols=74 Identities=34% Similarity=0.552 Sum_probs=59.2
Q ss_pred ccchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc-CCCCCCCcEEE
Q psy7827 59 IDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL-HYPKLNKRIKF 136 (140)
Q Consensus 59 ~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~-~~~~~~~~i~~ 136 (140)
...+.....++..+. +.++.+|||+|||+|.++..+++..++.++++++|+++.+++.| +++... +. .++++
T Consensus 79 ~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~----~~v~~ 152 (258)
T 2pwy_A 79 PTYPKDASAMVTLLD--LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV----ENVRF 152 (258)
T ss_dssp CCCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC----CCEEE
T ss_pred cccchHHHHHHHHcC--CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC----CCEEE
Confidence 334555566777776 78899999999999999999999966667899999999999999 888776 53 24555
Q ss_pred ee
Q psy7827 137 IC 138 (140)
Q Consensus 137 ~~ 138 (140)
++
T Consensus 153 ~~ 154 (258)
T 2pwy_A 153 HL 154 (258)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 70
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.16 E-value=2.4e-10 Score=86.31 Aligned_cols=73 Identities=25% Similarity=0.300 Sum_probs=59.7
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.+.+...++..+. +.++.+|||+|||+|.+++.++...++..+++|+|+++.+++.| +|+..+++. +|+++++
T Consensus 188 ~~~la~~l~~~~~--~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~----~i~~~~~ 261 (354)
T 3tma_A 188 TPVLAQALLRLAD--ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS----WIRFLRA 261 (354)
T ss_dssp CHHHHHHHHHHTT--CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT----TCEEEEC
T ss_pred CHHHHHHHHHHhC--CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC----ceEEEeC
Confidence 4556666666666 67889999999999999999999874556799999999999999 999988873 5666553
No 71
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.16 E-value=2e-10 Score=83.22 Aligned_cols=67 Identities=30% Similarity=0.423 Sum_probs=53.1
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 65 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
...+++.+. +.++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.| +++...++ ..++++++
T Consensus 50 ~~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~~~~~~ 117 (273)
T 3bus_A 50 TDEMIALLD--VRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGL---ANRVTFSY 117 (273)
T ss_dssp HHHHHHHSC--CCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEE
T ss_pred HHHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCC---CcceEEEE
Confidence 444455544 6788999999999999999999875 45899999999999999 88877765 34566654
No 72
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.16 E-value=1.8e-10 Score=84.47 Aligned_cols=57 Identities=19% Similarity=0.297 Sum_probs=51.1
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
.+.+.+.+++.+. +.++ +|||||||+|.++..+++... +|+|+|+++.|++.+ +++.
T Consensus 32 d~~i~~~Iv~~~~--~~~~-~VLEIG~G~G~lt~~L~~~~~---~V~avEid~~~~~~l~~~~~ 89 (271)
T 3fut_A 32 SEAHLRRIVEAAR--PFTG-PVFEVGPGLGALTRALLEAGA---EVTAIEKDLRLRPVLEETLS 89 (271)
T ss_dssp CHHHHHHHHHHHC--CCCS-CEEEECCTTSHHHHHHHHTTC---CEEEEESCGGGHHHHHHHTT
T ss_pred CHHHHHHHHHhcC--CCCC-eEEEEeCchHHHHHHHHHcCC---EEEEEECCHHHHHHHHHhcC
Confidence 5778889999987 7788 999999999999999999864 599999999999999 8775
No 73
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.15 E-value=1.4e-10 Score=80.96 Aligned_cols=68 Identities=21% Similarity=0.419 Sum_probs=53.2
Q ss_pred HHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 63 VQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 63 ~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
.+...+++.+. ..++ +|||+|||+|.++..+++. +..+++|+|+|+.+++.| +++...+. ..++++++
T Consensus 31 ~~~~~~~~~~~--~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~---~~~~~~~~ 99 (219)
T 3dlc_A 31 IIAENIINRFG--ITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANL---NDRIQIVQ 99 (219)
T ss_dssp HHHHHHHHHHC--CCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEE
T ss_pred HHHHHHHHhcC--CCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccc---cCceEEEE
Confidence 34555566654 4445 9999999999999999998 345799999999999999 88887765 34566654
No 74
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.15 E-value=1.6e-10 Score=82.94 Aligned_cols=71 Identities=24% Similarity=0.440 Sum_probs=55.5
Q ss_pred HHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 63 VQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 63 ~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.....++..+. .+.++.+|||+|||+|.++..+++..+ ++++|+|+|+.+++.| +++...++ ..+++++++
T Consensus 32 ~~~~~~l~~l~-~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~~ 103 (257)
T 3f4k_A 32 EATRKAVSFIN-ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANC---ADRVKGITG 103 (257)
T ss_dssp HHHHHHHTTSC-CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEEC
T ss_pred HHHHHHHHHHh-cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCC---CCceEEEEC
Confidence 34445555542 256788999999999999999999973 3799999999999999 99888776 345766653
No 75
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.15 E-value=2.9e-10 Score=82.99 Aligned_cols=72 Identities=28% Similarity=0.453 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
+.....++..+. +.++.+|||+|||+|.++..+++..++.++++++|+++.+++.| +++...++ ..++++++
T Consensus 98 ~~~~~~i~~~~~--~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~v~~~~ 170 (277)
T 1o54_A 98 PKDSSFIAMMLD--VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL---IERVTIKV 170 (277)
T ss_dssp HHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC---GGGEEEEC
T ss_pred HHHHHHHHHHhC--CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC---CCCEEEEE
Confidence 444456666666 78899999999999999999999865667899999999999999 98887765 23566554
No 76
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.15 E-value=4.6e-11 Score=88.07 Aligned_cols=50 Identities=26% Similarity=0.374 Sum_probs=41.3
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
..++.+|||||||+|.++..+++.+ +..+|+|+|+|+.|++.| +++...+
T Consensus 44 ~~~~~~VLDiGCG~G~~~~~la~~~-~~~~v~gvDis~~~i~~A~~~~~~~~ 94 (292)
T 3g07_A 44 WFRGRDVLDLGCNVGHLTLSIACKW-GPSRMVGLDIDSRLIHSARQNIRHYL 94 (292)
T ss_dssp GTTTSEEEEESCTTCHHHHHHHHHT-CCSEEEEEESCHHHHHHHHHTC----
T ss_pred hcCCCcEEEeCCCCCHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhh
Confidence 3468899999999999999999997 346899999999999999 8876544
No 77
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.15 E-value=3.4e-10 Score=82.61 Aligned_cols=58 Identities=22% Similarity=0.451 Sum_probs=49.1
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.++.+|||+|||+|.++..+++.. +..+++|+|+|+.+++.| +++..+++. +++++++
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~----~v~~~~~ 166 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIK----NIHILQS 166 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCC----SEEEECC
T ss_pred cCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCC----ceEEEEc
Confidence 467899999999999999999886 567899999999999999 998887763 4666553
No 78
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.15 E-value=1.6e-10 Score=82.53 Aligned_cols=62 Identities=23% Similarity=0.315 Sum_probs=52.2
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
++.....+++.+. +.++.+|||+|||+|.++..+++.+. +++|+|+|+.|++.| +++...+.
T Consensus 6 ~~~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~ 68 (239)
T 1xxl_A 6 HHHSLGLMIKTAE--CRAEHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGV 68 (239)
T ss_dssp CHHHHHHHHHHHT--CCTTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTC
T ss_pred cCCCcchHHHHhC--cCCCCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCC
Confidence 3344566777777 88999999999999999999998753 699999999999999 88877665
No 79
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.14 E-value=1.5e-10 Score=82.60 Aligned_cols=68 Identities=22% Similarity=0.248 Sum_probs=53.8
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 65 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
...+...+.. ..++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.| +++...++ ..+++++++
T Consensus 66 ~~~l~~~~~~-~~~~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~~ 134 (241)
T 3gdh_A 66 AEHIAGRVSQ-SFKCDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGI---ADKIEFICG 134 (241)
T ss_dssp HHHHHHHHHH-HSCCSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTC---GGGEEEEES
T ss_pred HHHHHHHhhh-ccCCCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCC---CcCeEEEEC
Confidence 4444444431 3478999999999999999999874 4699999999999999 99988876 246777764
No 80
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.14 E-value=5e-11 Score=85.58 Aligned_cols=60 Identities=15% Similarity=0.219 Sum_probs=48.5
Q ss_pred cccc-hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHH---hCCCCeEEEEcCCHHHHHHH
Q psy7827 58 IIDN-PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHM---VGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 58 ~~~~-~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~---~~~~~~v~gvD~s~~~i~~a 119 (140)
.+.+ +.....+.+.+. ..++.+|||||||+|..+..+++. ..+.++|+|||+|+.|++.|
T Consensus 62 ~~~~~p~~~~~l~~~l~--~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a 125 (236)
T 2bm8_A 62 RMLKDPDTQAVYHDMLW--ELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIP 125 (236)
T ss_dssp ECCSCHHHHHHHHHHHH--HHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCC
T ss_pred cccCCHHHHHHHHHHHH--hcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHH
Confidence 3444 666666666666 446789999999999999999997 34677899999999998877
No 81
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.14 E-value=3.9e-11 Score=87.60 Aligned_cols=58 Identities=16% Similarity=0.217 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 63 VQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 63 ~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
.+...+++.+. +.++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.| +++...
T Consensus 32 ~~~~~il~~l~--l~~g~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~Ar~~~~~~ 90 (261)
T 3iv6_A 32 SDRENDIFLEN--IVPGSTVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDDLAEALADR 90 (261)
T ss_dssp CHHHHHHHTTT--CCTTCEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTSSS
T ss_pred HHHHHHHHhcC--CCCcCEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHhc
Confidence 45667777776 78899999999999999999998753 699999999999999 876543
No 82
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.14 E-value=3.9e-10 Score=78.56 Aligned_cols=62 Identities=23% Similarity=0.208 Sum_probs=49.9
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCC
Q psy7827 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYP 128 (140)
Q Consensus 65 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~ 128 (140)
...+++.+...+.++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.| +++...+..
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~ 109 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLG--AKSVLATDISDESMTAAEENAALNGIY 109 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 444555554445688999999999999999988753 45799999999999999 988877763
No 83
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.13 E-value=2.2e-10 Score=83.05 Aligned_cols=57 Identities=21% Similarity=0.142 Sum_probs=44.2
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
.+.+.+.+...+. +.++.+|||+|||+|..+..|++.+. +|+|||+|+.|++.| ++.
T Consensus 53 ~~~l~~~~~~~~~--~~~~~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~ 110 (252)
T 2gb4_A 53 HQLLKKHLDTFLK--GQSGLRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQ 110 (252)
T ss_dssp CHHHHHHHHHHHT--TCCSCEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHT
T ss_pred CHHHHHHHHHhcc--CCCCCeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhc
Confidence 3444444433332 45788999999999999999998843 599999999999999 665
No 84
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.13 E-value=2.8e-10 Score=87.76 Aligned_cols=73 Identities=16% Similarity=0.089 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh-------hcCCCCCCCc
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT-------TLHYPKLNKR 133 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~-------~~~~~~~~~~ 133 (140)
+.....+++.+. +.++++|||||||+|.+++.++...+ ..+++|||+++.+++.| +++. .+++. ..+
T Consensus 159 ~~~i~~il~~l~--l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~--~~r 233 (438)
T 3uwp_A 159 FDLVAQMIDEIK--MTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK--HAE 233 (438)
T ss_dssp HHHHHHHHHHHC--CCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC--CCE
T ss_pred HHHHHHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC--CCC
Confidence 445677777776 88999999999999999999998753 33699999999999999 7543 33432 257
Q ss_pred EEEeec
Q psy7827 134 IKFICE 139 (140)
Q Consensus 134 i~~~~g 139 (140)
|+|++|
T Consensus 234 Vefi~G 239 (438)
T 3uwp_A 234 YTLERG 239 (438)
T ss_dssp EEEEEC
T ss_pred eEEEEC
Confidence 888876
No 85
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.13 E-value=4.2e-10 Score=82.85 Aligned_cols=61 Identities=18% Similarity=0.190 Sum_probs=49.2
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc-CCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL-HYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~-~~~~~~~~i~~~~g 139 (140)
..++.+|||+|||+|..+..+++...+..+++|+|+|+.+++.| +++... +. ..+++++++
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~~v~~~~~ 96 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT---YKNVSFKIS 96 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C---CTTEEEEEC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC---CCceEEEEc
Confidence 35789999999999999999998764567899999999999999 887765 22 245666553
No 86
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.13 E-value=2.4e-10 Score=79.61 Aligned_cols=71 Identities=14% Similarity=0.217 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhcc-cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 63 VQHAEVLELLKDK-LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 63 ~~~~~~~~~l~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
.+...+++.+... ..++.+|||+|||+|.++..++... +..+++|+|+|+.+++.| +++...++. ++++++
T Consensus 49 ~~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~v~~~~ 121 (207)
T 1jsx_A 49 MLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLE----NIEPVQ 121 (207)
T ss_dssp HHHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCS----SEEEEE
T ss_pred HHHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCC----CeEEEe
Confidence 3455566655410 1247899999999999999999985 567899999999999999 888877763 366554
No 87
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.13 E-value=2.4e-10 Score=83.52 Aligned_cols=59 Identities=25% Similarity=0.301 Sum_probs=49.1
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.++.+|||||||+|.++..+++..+ .+++|+|+|+.+++.| +++...+. ..+++++++
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~---~~~~~~~~~ 121 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSEN---LRSKRVLLA 121 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCC---CSCEEEEES
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCC---CCCeEEEEC
Confidence 67889999999999999999997663 3899999999999999 88877665 346766553
No 88
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.13 E-value=1.8e-10 Score=82.99 Aligned_cols=58 Identities=26% Similarity=0.382 Sum_probs=49.4
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 65 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
...+++.+. +.++.+|||+|||+|.++..+++.+. +++|+|+|+.|++.| +++...+.
T Consensus 26 ~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~ 84 (260)
T 1vl5_A 26 LAKLMQIAA--LKGNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGH 84 (260)
T ss_dssp HHHHHHHHT--CCSCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhC--CCCCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCC
Confidence 456667776 67889999999999999999998863 699999999999999 88776664
No 89
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.13 E-value=3.8e-10 Score=82.81 Aligned_cols=69 Identities=19% Similarity=0.130 Sum_probs=54.8
Q ss_pred HHHHHHHHH----hcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 64 QHAEVLELL----KDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 64 ~~~~~~~~l----~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
....+++.+ . +.++.+|||+|||+|.++..+++..+ .+++|+|+|+.+++.| +++...++ ..++++++
T Consensus 66 ~~~~l~~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~---~~~~~~~~ 138 (297)
T 2o57_A 66 TDEWLASELAMTGV--LQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAGL---ADNITVKY 138 (297)
T ss_dssp HHHHHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHTC---TTTEEEEE
T ss_pred HHHHHHHHhhhccC--CCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCC---CcceEEEE
Confidence 445566666 4 67889999999999999999999863 4799999999999999 88877765 34566654
Q ss_pred c
Q psy7827 139 E 139 (140)
Q Consensus 139 g 139 (140)
+
T Consensus 139 ~ 139 (297)
T 2o57_A 139 G 139 (297)
T ss_dssp C
T ss_pred c
Confidence 3
No 90
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.13 E-value=2.1e-10 Score=84.11 Aligned_cols=59 Identities=20% Similarity=0.193 Sum_probs=50.7
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
++++.+|||+|||+|.++..+++.+.. +|+|+|+|+.+++.| +|+..+++. .+++++++
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~---~~v~~~~~ 182 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVE---DRMSAYNM 182 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCT---TTEEEECS
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCC---ceEEEEEC
Confidence 567899999999999999999998643 799999999999999 999888873 45777654
No 91
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.12 E-value=2.2e-10 Score=80.78 Aligned_cols=46 Identities=26% Similarity=0.331 Sum_probs=39.8
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
++++.+|||+|||+|..+..+++.++ .++|+|+|+|+.|++.+ +..
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a 101 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELV 101 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHH
Confidence 56889999999999999999999975 67899999999987665 443
No 92
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.12 E-value=1.8e-10 Score=83.08 Aligned_cols=59 Identities=14% Similarity=0.277 Sum_probs=50.3
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.+.+...+++.+. +.++.+|||+|||+|.++..+++.+ .+++|+|+|+.|++.+ +++..
T Consensus 15 d~~~~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~ 74 (244)
T 1qam_A 15 SKHNIDKIMTNIR--LNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD 74 (244)
T ss_dssp CHHHHHHHHTTCC--CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHhCC--CCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc
Confidence 4667777777766 6788999999999999999999986 3699999999999999 87653
No 93
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.12 E-value=7.7e-11 Score=82.04 Aligned_cols=62 Identities=29% Similarity=0.388 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhccc-CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 63 VQHAEVLELLKDKL-VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 63 ~~~~~~~~~l~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
.+...+++.+. . .++.+|||+|||+|.++..+++.. +..+++|+|+|+.+++.| +++...+.
T Consensus 16 ~~~~~~~~~l~--~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~ 79 (215)
T 4dzr_A 16 VLVEEAIRFLK--RMPSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGA 79 (215)
T ss_dssp HHHHHHHHHHT--TCCTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC----------------
T ss_pred HHHHHHHHHhh--hcCCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCC
Confidence 34455555554 3 678899999999999999999985 566899999999999999 88876653
No 94
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.12 E-value=1.9e-10 Score=82.66 Aligned_cols=49 Identities=18% Similarity=0.329 Sum_probs=43.4
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
+.++.+|||||||+|.++..+++.. +..+++|||+|+.+++.| +++..+
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~ 96 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIAL 96 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHH
Confidence 4577899999999999999999986 566899999999999999 887665
No 95
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.11 E-value=1.7e-10 Score=83.53 Aligned_cols=59 Identities=24% Similarity=0.347 Sum_probs=50.5
Q ss_pred cC-CCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LV-PGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~-~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+. ++.+|||+|||+|.++..+++... ++|+|+|+++.+++.| +++..+++ .++++++++
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~---~~~v~~~~~ 106 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQL---EDQIEIIEY 106 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTC---TTTEEEECS
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCC---cccEEEEEC
Confidence 56 789999999999999999998853 3899999999999999 99988877 356777654
No 96
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.11 E-value=1.3e-10 Score=84.46 Aligned_cols=60 Identities=18% Similarity=0.281 Sum_probs=50.7
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh---cCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT---LHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~---~~~~~~~~~i~~~~g 139 (140)
..++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.| +++.. +++ .++++++++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l---~~~v~~~~~ 97 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAF---SARIEVLEA 97 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTT---GGGEEEEEC
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCC---cceEEEEeC
Confidence 4577899999999999999999986 457899999999999999 99877 665 356777654
No 97
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.11 E-value=8.1e-10 Score=85.81 Aligned_cols=115 Identities=17% Similarity=0.212 Sum_probs=74.9
Q ss_pred chhhhcCCCCCHHHHHHHHhCCCCCCCCCCCCcccc--------------ccccccCCCCcccchHHHHHHHHHHhcccC
Q psy7827 12 DYIVEIDSIKSPRVIDAMIHIDRGHFCAHNDSRKYM--------------LAARDIGYGSIIDNPVQHAEVLELLKDKLV 77 (140)
Q Consensus 12 ~~l~~~~~~~~~~~~~a~~~~~r~~f~~~~~~~~y~--------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 77 (140)
++|+.+++ .+ +.+++..+|++.+ ..-...+|. ... ...+|... +.+...+++.+. +.
T Consensus 171 ~~Lr~~~I-~~--vl~a~~~vPr~~~-e~il~~aY~~~l~P~~~~l~~Y~~~s-~~~yGet~--p~~v~~ml~~l~--l~ 241 (433)
T 1u2z_A 171 REIPRQRI-ID--HLETIDKIPRSFI-HDFLHIVYTRSIHPQANKLKHYKAFS-NYVYGELL--PNFLSDVYQQCQ--LK 241 (433)
T ss_dssp TTSCHHHH-HH--HHTTCCEEEHHHH-HHHHHHHHHHHTGGGGGGGCSCCSSG-GGCCCCBC--HHHHHHHHHHTT--CC
T ss_pred HHHhhccH-HH--HHHHHHhCCHHHH-HHHHHHHHHhhccccHHHHHHhhhcc-cccccccc--HHHHHHHHHhcC--CC
Confidence 47766663 22 6777777777653 111112232 111 22334333 667788888877 78
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH--------hchhhcCCCCCCCcEEEee
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA--------SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a--------~~~~~~~~~~~~~~i~~~~ 138 (140)
++.+|||+|||+|.++..+++.++ ..+|+|||+++.+++.| +++...++. ..+|++++
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~--~~nV~~i~ 307 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMR--LNNVEFSL 307 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC--CCCEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC--CCceEEEE
Confidence 899999999999999999999873 35799999999987666 344445531 14677765
No 98
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.11 E-value=2.7e-10 Score=84.46 Aligned_cols=59 Identities=19% Similarity=0.319 Sum_probs=49.4
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.| +++...++ ..+++++++
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~ 147 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDT---NRSRQVLLQ 147 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCC---SSCEEEEES
T ss_pred CCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCC---CCceEEEEC
Confidence 5688999999999999999999886 34799999999999999 88887765 345666553
No 99
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.11 E-value=3.9e-10 Score=77.16 Aligned_cols=69 Identities=17% Similarity=0.202 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 63 VQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 63 ~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
.....+++.+. ..++.+|||+|||+|.++..+++. ..+++|+|+++.+++.| +++...+.. +.++++++
T Consensus 39 ~~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~--~~~~~~~~ 108 (194)
T 1dus_A 39 KGTKILVENVV--VDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLD--NYDIRVVH 108 (194)
T ss_dssp HHHHHHHHHCC--CCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCT--TSCEEEEE
T ss_pred hHHHHHHHHcc--cCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCC--ccceEEEE
Confidence 35566777776 668889999999999999999887 34799999999999999 888877653 11366654
No 100
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.11 E-value=2.4e-10 Score=83.43 Aligned_cols=66 Identities=21% Similarity=0.368 Sum_probs=50.5
Q ss_pred HHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc-CCCCCCCcEEEee
Q psy7827 67 EVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL-HYPKLNKRIKFIC 138 (140)
Q Consensus 67 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~-~~~~~~~~i~~~~ 138 (140)
.+++.+. +.++.+|||+|||+|.++..+++...+.++++|+|+++.+++.| +++... +. .++++++
T Consensus 101 ~~~~~~~--~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~----~~v~~~~ 168 (275)
T 1yb2_A 101 YIIMRCG--LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI----GNVRTSR 168 (275)
T ss_dssp -----CC--CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC----TTEEEEC
T ss_pred HHHHHcC--CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC----CcEEEEE
Confidence 4444444 67889999999999999999999855567899999999999999 888776 53 2455544
No 101
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.10 E-value=1.2e-09 Score=76.04 Aligned_cols=71 Identities=24% Similarity=0.230 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHhc-ccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 62 PVQHAEVLELLKD-KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 62 ~~~~~~~~~~l~~-~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.....++..+.. ...++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.| +++...++ +++++++
T Consensus 32 ~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~ 104 (207)
T 1wy7_A 32 GNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLG--AKEVICVEVDKEAVDVLIENLGEFKG-----KFKVFIG 104 (207)
T ss_dssp HHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHTGGGTT-----SEEEEES
T ss_pred hHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCC-----CEEEEEC
Confidence 4445555544431 14568899999999999999999873 23699999999999999 88877664 4555543
No 102
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.10 E-value=5e-10 Score=82.44 Aligned_cols=59 Identities=17% Similarity=0.162 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
......+++.+. .++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.| +++...+
T Consensus 69 ~~~~~~~~~~~~---~~~~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~ 128 (299)
T 3g2m_A 69 TSEAREFATRTG---PVSGPVLELAAGMGRLTFPFLDLG---WEVTALELSTSVLAAFRKRLAEAP 128 (299)
T ss_dssp HHHHHHHHHHHC---CCCSCEEEETCTTTTTHHHHHTTT---CCEEEEESCHHHHHHHHHHHHTSC
T ss_pred cHHHHHHHHhhC---CCCCcEEEEeccCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHhhcc
Confidence 344555566654 345599999999999999999874 3599999999999999 8877654
No 103
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.10 E-value=4.8e-10 Score=83.68 Aligned_cols=66 Identities=17% Similarity=0.218 Sum_probs=55.0
Q ss_pred HHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 67 EVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 67 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
.+...+. +.++.+|||+|||+|..+..+++..+..++|+|+|+|+.+++.+ +++...++. ++++++
T Consensus 109 l~~~~l~--~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~----~v~~~~ 175 (315)
T 1ixk_A 109 YPPVALD--PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL----NVILFH 175 (315)
T ss_dssp HHHHHHC--CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC----SEEEES
T ss_pred HHHHHhC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC----eEEEEE
Confidence 3445555 77889999999999999999999876568899999999999999 999888763 455554
No 104
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.10 E-value=3.4e-10 Score=81.24 Aligned_cols=57 Identities=30% Similarity=0.463 Sum_probs=45.8
Q ss_pred HHHHHHHHHHh-cccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 63 VQHAEVLELLK-DKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 63 ~~~~~~~~~l~-~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.....++..+. -.++++++|||+|||+|..+..+++..++.++|+|+|+|+.|++..
T Consensus 60 kla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l 117 (232)
T 3id6_C 60 KLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVREL 117 (232)
T ss_dssp HHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHH
T ss_pred HHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHH
Confidence 34445555443 1367899999999999999999999988889999999999987544
No 105
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=99.09 E-value=4.3e-10 Score=81.64 Aligned_cols=69 Identities=9% Similarity=0.132 Sum_probs=53.9
Q ss_pred cchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 60 DNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 60 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
..+.+.+.+++.+. +.++++|||||||+|.++. ++ .. ...+|+|+|+++.|++.+ +++... .++++++
T Consensus 5 ~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~-l~-~~-~~~~v~avEid~~~~~~a~~~~~~~------~~v~~i~ 73 (252)
T 1qyr_A 5 NDQFVIDSIVSAIN--PQKGQAMVEIGPGLAALTE-PV-GE-RLDQLTVIELDRDLAARLQTHPFLG------PKLTIYQ 73 (252)
T ss_dssp CCHHHHHHHHHHHC--CCTTCCEEEECCTTTTTHH-HH-HT-TCSCEEEECCCHHHHHHHHTCTTTG------GGEEEEC
T ss_pred CCHHHHHHHHHhcC--CCCcCEEEEECCCCcHHHH-hh-hC-CCCeEEEEECCHHHHHHHHHHhccC------CceEEEE
Confidence 45778889999887 7888999999999999999 65 33 323499999999999999 876542 2466655
Q ss_pred c
Q psy7827 139 E 139 (140)
Q Consensus 139 g 139 (140)
|
T Consensus 74 ~ 74 (252)
T 1qyr_A 74 Q 74 (252)
T ss_dssp S
T ss_pred C
Confidence 3
No 106
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.09 E-value=1.8e-10 Score=88.03 Aligned_cols=58 Identities=29% Similarity=0.379 Sum_probs=49.3
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
..++++|||||||+|.+++.+++.+.. +|+|||.|+ |++.| +++..+++ .++|+++++
T Consensus 81 ~~~~k~VLDvG~GtGiLs~~Aa~aGA~--~V~ave~s~-~~~~a~~~~~~n~~---~~~i~~i~~ 139 (376)
T 4hc4_A 81 ALRGKTVLDVGAGTGILSIFCAQAGAR--RVYAVEASA-IWQQAREVVRFNGL---EDRVHVLPG 139 (376)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTTCS--EEEEEECST-THHHHHHHHHHTTC---TTTEEEEES
T ss_pred hcCCCEEEEeCCCccHHHHHHHHhCCC--EEEEEeChH-HHHHHHHHHHHcCC---CceEEEEee
Confidence 347899999999999999988887643 799999996 88999 88888887 567888875
No 107
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.09 E-value=1.9e-10 Score=81.80 Aligned_cols=49 Identities=20% Similarity=0.361 Sum_probs=42.9
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
+.++.+|||+|||+|.++..+++..+ .++|+|+|+|+.+++.| +++...
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~ 121 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER 121 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC
Confidence 56788999999999999999999974 56899999999999999 776543
No 108
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.09 E-value=2.2e-10 Score=81.65 Aligned_cols=58 Identities=14% Similarity=0.185 Sum_probs=43.8
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCC-HHHH---HHH-hchhhcCCCCCCCcEEEee
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHI-PEIV---NHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s-~~~i---~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
..++.+|||||||+|.++..+++.. +..+|+|||+| +.|+ +.| +++.+.++. ++++++
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~----~v~~~~ 84 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGLS----NVVFVI 84 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS----SEEEEC
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC----CeEEEE
Confidence 4678899999999999999999764 56789999999 5555 445 555555553 466554
No 109
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.08 E-value=1.2e-10 Score=85.15 Aligned_cols=57 Identities=19% Similarity=0.268 Sum_probs=46.3
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.| +++...++ ..+++++++
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~ 124 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAERG---HQVILCDLSAQMIDRAKQAAEAKGV---SDNMQFIHC 124 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHC-CC---GGGEEEEES
T ss_pred CCCCEEEEeCCcchHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCC---CcceEEEEc
Confidence 457899999999999999999883 3699999999999999 88877765 245666553
No 110
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.07 E-value=2.8e-10 Score=81.54 Aligned_cols=50 Identities=14% Similarity=0.068 Sum_probs=42.7
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
..+|.+|||||||+|..+..+++.. ..+++|||+|+.+++.| ++....+.
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~~ 108 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTH 108 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCSS
T ss_pred ccCCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCCC
Confidence 4688999999999999999998764 24799999999999999 88776654
No 111
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.07 E-value=6.1e-10 Score=81.43 Aligned_cols=59 Identities=20% Similarity=0.189 Sum_probs=50.8
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.++.+|||+|||+|.++..+++.++ .++|+|+|+++.+++.| +|+..+++. ++.++++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~----~~~~~~~ 176 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLN----NVIPILA 176 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCS----SEEEEES
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC----CEEEEEC
Confidence 67889999999999999999999863 56799999999999999 999888874 4666554
No 112
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.07 E-value=2.6e-10 Score=81.86 Aligned_cols=48 Identities=15% Similarity=0.278 Sum_probs=40.9
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
..++.+|||||||+|.++..+++.. ++.+++|||+|+.|++.| +++..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~ 92 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRA 92 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHH
Confidence 3566799999999999999999885 567899999999999999 77654
No 113
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.07 E-value=3.8e-10 Score=87.61 Aligned_cols=67 Identities=34% Similarity=0.469 Sum_probs=54.4
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 64 QHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 64 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+...+++.+. +.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.| +|+..+++. +++|+++
T Consensus 274 l~~~~~~~l~--~~~~~~VLDlgcG~G~~~~~la~~~---~~V~gvD~s~~al~~A~~n~~~~~~~----~v~f~~~ 341 (433)
T 1uwv_A 274 MVARALEWLD--VQPEDRVLDLFCGMGNFTLPLATQA---ASVVGVEGVPALVEKGQQNARLNGLQ----NVTFYHE 341 (433)
T ss_dssp HHHHHHHHHT--CCTTCEEEEESCTTTTTHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCC----SEEEEEC
T ss_pred HHHHHHHhhc--CCCCCEEEECCCCCCHHHHHHHhhC---CEEEEEeCCHHHHHHHHHHHHHcCCC----ceEEEEC
Confidence 4555556665 5678899999999999999999873 4699999999999999 999888763 5777654
No 114
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.07 E-value=5.2e-10 Score=82.94 Aligned_cols=59 Identities=15% Similarity=0.191 Sum_probs=49.9
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.++.+|||+|||+|.++..+++.. ..+|+|+|+++.+++.| +++...++ ..+++++++
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~ 174 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRI---DDHVRSRVC 174 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEEC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCC---CCceEEEEC
Confidence 4578899999999999999999985 34799999999999999 99888776 346776653
No 115
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.07 E-value=3.7e-10 Score=80.49 Aligned_cols=57 Identities=12% Similarity=0.055 Sum_probs=45.3
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
..++.+|||+|||+|.++..+++.. ..+++|+|+|+.|++.| ++....+. +++++++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~-----~v~~~~~ 115 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTH-----KVIPLKG 115 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCSS-----EEEEEES
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcCC-----CeEEEec
Confidence 4678899999999999999997653 23799999999999999 87766542 4665543
No 116
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.07 E-value=8e-10 Score=84.25 Aligned_cols=72 Identities=26% Similarity=0.311 Sum_probs=56.8
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.+.+.+.++... ..++.+|||+|||+|.+++.++... ..++|+|+|+|+.|++.| +|+..+++ .++|+++++
T Consensus 203 ~~~la~~l~~~~---~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~gl---~~~i~~~~~ 275 (373)
T 3tm4_A 203 KASIANAMIELA---ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAGV---LDKIKFIQG 275 (373)
T ss_dssp CHHHHHHHHHHH---TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTTC---GGGCEEEEC
T ss_pred cHHHHHHHHHhh---cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcCC---CCceEEEEC
Confidence 345555555554 5678999999999999999999886 345799999999999999 99988887 345666653
No 117
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.07 E-value=1.2e-09 Score=77.88 Aligned_cols=70 Identities=27% Similarity=0.421 Sum_probs=56.1
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
.+.....++..+. +.++.+|||+|||+|.++..+++. ..+++++|+++.+++.| +++...++ ..++++++
T Consensus 76 ~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~ 146 (248)
T 2yvl_A 76 YPKDSFYIALKLN--LNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNL---GKNVKFFN 146 (248)
T ss_dssp CHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTC---CTTEEEEC
T ss_pred cchhHHHHHHhcC--CCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCC---CCcEEEEE
Confidence 3555566666666 778999999999999999999998 34799999999999999 88877765 23566554
No 118
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.06 E-value=2e-10 Score=84.87 Aligned_cols=62 Identities=19% Similarity=0.165 Sum_probs=51.4
Q ss_pred ccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 75 KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.+.++.+|||+|||+|.++..++....+..+++|+|+|+.+++.| +++...+. .++++++++
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~ 177 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL---AGQITLHRQ 177 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT---GGGEEEEEC
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC---CCceEEEEC
Confidence 367889999999999999999864444677899999999999999 99888776 346777654
No 119
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.06 E-value=4.6e-10 Score=82.20 Aligned_cols=64 Identities=16% Similarity=0.256 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
+.+...+++.+. .+.++.+|||+|||+|.++..+++..+...+++|+|+|+.+++.| +++...+
T Consensus 7 ~~~~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~ 71 (284)
T 3gu3_A 7 DDYVSFLVNTVW-KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP 71 (284)
T ss_dssp HHHHHHHHHTTS-CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS
T ss_pred hHHHHHHHHHHh-ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence 344555555542 256789999999999999999999874457899999999999999 8776544
No 120
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.05 E-value=6.6e-10 Score=79.55 Aligned_cols=48 Identities=25% Similarity=0.268 Sum_probs=41.6
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
.++.+|||+|||+|.++..+++.. .+++|+|+|+.|++.| +++...+.
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~ 88 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERG---YEVVGLDLHEEMLRVARRKAKERNL 88 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHhcCC
Confidence 567899999999999999999873 3699999999999999 88776553
No 121
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.05 E-value=4.9e-10 Score=89.68 Aligned_cols=58 Identities=21% Similarity=0.277 Sum_probs=47.2
Q ss_pred ccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 75 KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.+..+.+|||||||.|.++..||+.+. +|+|||+++.+++.| .+..+.+.- +|+++++
T Consensus 63 ~~~~~~~vLDvGCG~G~~~~~la~~ga---~V~giD~~~~~i~~a~~~a~~~~~~----~~~~~~~ 121 (569)
T 4azs_A 63 ALGRPLNVLDLGCAQGFFSLSLASKGA---TIVGIDFQQENINVCRALAEENPDF----AAEFRVG 121 (569)
T ss_dssp HHTSCCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHTSTTS----EEEEEEC
T ss_pred hcCCCCeEEEECCCCcHHHHHHHhCCC---EEEEECCCHHHHHHHHHHHHhcCCC----ceEEEEC
Confidence 346778999999999999999999854 599999999999999 877766531 4666554
No 122
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.05 E-value=5.6e-10 Score=81.65 Aligned_cols=66 Identities=21% Similarity=0.212 Sum_probs=54.6
Q ss_pred HHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 68 VLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 68 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+...+. +.++.+|||+|||+|..+..+++.....++|+|+|+++.+++.+ +++...++. +++++++
T Consensus 75 ~~~~l~--~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~----~v~~~~~ 141 (274)
T 3ajd_A 75 PPIVLN--PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL----NTIIINA 141 (274)
T ss_dssp HHHHHC--CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC----SEEEEES
T ss_pred HHHHhC--CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC----cEEEEeC
Confidence 344555 67889999999999999999999874447899999999999999 999888763 5666653
No 123
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.05 E-value=7.8e-10 Score=78.65 Aligned_cols=49 Identities=31% Similarity=0.418 Sum_probs=42.2
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
+.++.+|||+|||+|.++..+++..++.++|+|+|+|+.+++.+ ++...
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~ 124 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK 124 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc
Confidence 56789999999999999999999975567899999999988777 66554
No 124
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.05 E-value=6.6e-10 Score=78.60 Aligned_cols=50 Identities=28% Similarity=0.514 Sum_probs=43.7
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
+.++.+|||+|||+|.++..+++..++.++|+|+|+|+.+++.+ +++...
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~ 121 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER 121 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc
Confidence 56788999999999999999999876567899999999999999 776543
No 125
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.05 E-value=7.7e-10 Score=76.19 Aligned_cols=56 Identities=25% Similarity=0.240 Sum_probs=46.4
Q ss_pred HHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 67 EVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 67 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
.+.+.+. ..++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.| +++...+.
T Consensus 23 ~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~ 79 (199)
T 2xvm_A 23 EVLEAVK--VVKPGKTLDLGCGNGRNSLYLAANG---YDVDAWDKNAMSIANVERIKSIENL 79 (199)
T ss_dssp HHHHHTT--TSCSCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred HHHHHhh--ccCCCeEEEEcCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHhCCC
Confidence 4455555 5577899999999999999999873 3699999999999999 88877665
No 126
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.04 E-value=9.7e-10 Score=77.27 Aligned_cols=58 Identities=22% Similarity=0.279 Sum_probs=46.4
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 66 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
..+.+.+...+.++.+|||+|||+|.++..+++... +++|+|+|+.+++.| +++...+
T Consensus 26 ~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~ 84 (227)
T 1ve3_A 26 ETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRE 84 (227)
T ss_dssp HHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcC
Confidence 344444444456688999999999999999998853 699999999999999 8876554
No 127
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.04 E-value=5.1e-10 Score=82.33 Aligned_cols=59 Identities=20% Similarity=0.216 Sum_probs=52.0
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+++|.+|||+|||+|.+++.++... ..+|+++|++|.+++.+ +|+..+++ .++|+++++
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~v---~~~v~~~~~ 182 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKV---EDRMSAYNM 182 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTC---TTTEEEECS
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEeC
Confidence 5789999999999999999999885 34799999999999999 99999998 467887764
No 128
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.04 E-value=8.5e-10 Score=83.12 Aligned_cols=58 Identities=28% Similarity=0.377 Sum_probs=48.3
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.++.+|||+|||+|.++..+++.. ..+|+|+|+|+ |++.| +++..++. ..+|+++++
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g--~~~v~gvD~s~-~~~~a~~~~~~~~~---~~~i~~~~~ 120 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAG--AKKVLGVDQSE-ILYQAMDIIRLNKL---EDTITLIKG 120 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEESST-HHHHHHHHHHHTTC---TTTEEEEES
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcC--CCEEEEEChHH-HHHHHHHHHHHcCC---CCcEEEEEe
Confidence 5788999999999999999999873 34799999996 99999 88888776 346777654
No 129
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.03 E-value=5.8e-10 Score=80.11 Aligned_cols=56 Identities=29% Similarity=0.377 Sum_probs=45.9
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 65 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
...+++.+. +.++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.| +++..
T Consensus 44 ~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~ 100 (266)
T 3ujc_A 44 TKKILSDIE--LNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSG 100 (266)
T ss_dssp HHHHTTTCC--CCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCS
T ss_pred HHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhc
Confidence 344444444 6788899999999999999999986 35799999999999999 77644
No 130
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.03 E-value=3.8e-10 Score=81.73 Aligned_cols=58 Identities=24% Similarity=0.268 Sum_probs=50.6
Q ss_pred cchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hc
Q psy7827 60 DNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SN 121 (140)
Q Consensus 60 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~ 121 (140)
..+.+.+.+++.+. +.++.+|||+|||+|.++..+++.. ..+++|+|+|+.|++.+ ++
T Consensus 15 ~d~~i~~~iv~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~ 73 (249)
T 3ftd_A 15 VSEGVLKKIAEELN--IEEGNTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSI 73 (249)
T ss_dssp ECHHHHHHHHHHTT--CCTTCEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTS
T ss_pred CCHHHHHHHHHhcC--CCCcCEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhc
Confidence 35778888888887 7788999999999999999999873 35799999999999999 76
No 131
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.02 E-value=9.3e-10 Score=79.56 Aligned_cols=57 Identities=23% Similarity=0.295 Sum_probs=47.6
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
.+.+.+.+.+.+. +.++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.| ++.
T Consensus 19 ~~~~~~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~ 76 (261)
T 3ege_A 19 DIRIVNAIINLLN--LPKGSVIADIGAGTGGYSVALANQ---GLFVYAVEPSIVMRQQAVVHP 76 (261)
T ss_dssp CHHHHHHHHHHHC--CCTTCEEEEETCTTSHHHHHHHTT---TCEEEEECSCHHHHHSSCCCT
T ss_pred cHHHHHHHHHHhC--CCCCCEEEEEcCcccHHHHHHHhC---CCEEEEEeCCHHHHHHHHhcc
Confidence 3456777777776 678899999999999999999873 45799999999999988 653
No 132
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.02 E-value=6.9e-10 Score=84.67 Aligned_cols=58 Identities=31% Similarity=0.403 Sum_probs=49.5
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.++.+|||+|||+|.++..+++... .+|+|+|+| .|++.| +++..+++ ..+|+++++
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g~--~~V~gvD~s-~~~~~a~~~~~~~~~---~~~v~~~~~ 119 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAGA--RKVYAVEAT-KMADHARALVKANNL---DHIVEVIEG 119 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTTC--SEEEEEESS-TTHHHHHHHHHHTTC---TTTEEEEES
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcCC--CEEEEEccH-HHHHHHHHHHHHcCC---CCeEEEEEC
Confidence 56789999999999999999998842 379999999 999999 99888877 356777764
No 133
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.02 E-value=1.1e-09 Score=80.07 Aligned_cols=57 Identities=19% Similarity=0.300 Sum_probs=46.9
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 66 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
..+++.+. ..++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.| +++...++
T Consensus 110 ~~~~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~g---~~v~~vD~s~~~~~~a~~~~~~~~~ 167 (286)
T 3m70_A 110 GDVVDAAK--IISPCKVLDLGCGQGRNSLYLSLLG---YDVTSWDHNENSIAFLNETKEKENL 167 (286)
T ss_dssp HHHHHHHH--HSCSCEEEEESCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhh--ccCCCcEEEECCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHHcCC
Confidence 34445555 4578899999999999999999884 3699999999999999 88877654
No 134
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.01 E-value=1.2e-09 Score=83.42 Aligned_cols=50 Identities=32% Similarity=0.507 Sum_probs=44.7
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
+.++.+|||+|||+|.++..+++..++.++|+|+|+|+.+++.| +++...
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~ 131 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYH 131 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHH
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHh
Confidence 45788999999999999999999986677999999999999999 887654
No 135
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.01 E-value=8.5e-10 Score=79.83 Aligned_cols=58 Identities=33% Similarity=0.479 Sum_probs=47.4
Q ss_pred HHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 67 EVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 67 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
.+++.+...+.++.+|||+|||+|.++..+++.+ . +++|+|+++.+++.| +++..+++
T Consensus 109 ~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g-~--~v~gvDi~~~~v~~a~~n~~~~~~ 167 (254)
T 2nxc_A 109 LALKALARHLRPGDKVLDLGTGSGVLAIAAEKLG-G--KALGVDIDPMVLPQAEANAKRNGV 167 (254)
T ss_dssp HHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTT-C--EEEEEESCGGGHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhC-C--eEEEEECCHHHHHHHHHHHHHcCC
Confidence 3344444335788999999999999999988874 3 799999999999999 98887765
No 136
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.01 E-value=1e-09 Score=79.63 Aligned_cols=58 Identities=29% Similarity=0.458 Sum_probs=48.7
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
+.++.+|||+|||+|.++..+++.. +..+++|+|+|+.+++.| +++...++. ++++++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~~~~~ 93 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIK----NVKFLQ 93 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCC----SEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEE
Confidence 4688999999999999999999985 567899999999999999 888777653 355543
No 137
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.01 E-value=1.4e-09 Score=76.98 Aligned_cols=58 Identities=14% Similarity=0.237 Sum_probs=46.0
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 66 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
..+...+. ...++.+|||+|||+|.++..+++.. +..+++|+|+|+.+++.| +++...
T Consensus 33 ~~~~~~~~-~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~ 91 (234)
T 3dtn_A 33 GVSVSIAS-VDTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGN 91 (234)
T ss_dssp HHHHHTCC-CSCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSC
T ss_pred HHHHHHhh-cCCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccC
Confidence 33444432 23567899999999999999999986 567899999999999999 776543
No 138
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.00 E-value=5.6e-10 Score=81.66 Aligned_cols=56 Identities=25% Similarity=0.227 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
..+...+...+. ..++.+|||+|||+|..+..+++... +++|+|+|+.|++.| ++.
T Consensus 43 ~~~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~ 99 (293)
T 3thr_A 43 AEYKAWLLGLLR--QHGCHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKER 99 (293)
T ss_dssp HHHHHHHHHHHH--HTTCCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc--ccCCCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhh
Confidence 445666677776 56788999999999999999998843 699999999999999 765
No 139
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.00 E-value=9.3e-10 Score=84.05 Aligned_cols=59 Identities=22% Similarity=0.226 Sum_probs=49.4
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 66 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
+.+++.+. ..++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.| +++..+++
T Consensus 212 ~~ll~~l~--~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl 271 (375)
T 4dcm_A 212 RFFMQHLP--ENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMP 271 (375)
T ss_dssp HHHHHTCC--CSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCG
T ss_pred HHHHHhCc--ccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCC
Confidence 34555554 4556899999999999999999985 567899999999999999 99888765
No 140
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.00 E-value=1.3e-09 Score=90.03 Aligned_cols=74 Identities=16% Similarity=0.185 Sum_probs=54.5
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC--CCCCCcEEEeec
Q psy7827 64 QHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY--PKLNKRIKFICE 139 (140)
Q Consensus 64 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~--~~~~~~i~~~~g 139 (140)
....+++.+. ..++.+|||+|||+|.++..+++.+++..+|+|||+|+.|++.| +++..... ..-..+|+|+++
T Consensus 709 Rle~LLelL~--~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqG 785 (950)
T 3htx_A 709 RVEYALKHIR--ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDG 785 (950)
T ss_dssp HHHHHHHHHH--HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEES
T ss_pred HHHHHHHHhc--ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEEC
Confidence 4555666665 56889999999999999999998864456899999999999999 86653211 000135777654
No 141
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.00 E-value=4.3e-10 Score=81.82 Aligned_cols=43 Identities=23% Similarity=0.288 Sum_probs=37.4
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hc
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SN 121 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~ 121 (140)
...+.+|||||||+|.++..|++.+. +|+|+|+|+.|++.| ++
T Consensus 37 ~~~~~~vLDvGcGtG~~~~~l~~~~~---~v~gvD~s~~ml~~a~~~ 80 (257)
T 4hg2_A 37 APARGDALDCGCGSGQASLGLAEFFE---RVHAVDPGEAQIRQALRH 80 (257)
T ss_dssp SSCSSEEEEESCTTTTTHHHHHTTCS---EEEEEESCHHHHHTCCCC
T ss_pred cCCCCCEEEEcCCCCHHHHHHHHhCC---EEEEEeCcHHhhhhhhhc
Confidence 45667999999999999999998753 599999999999998 53
No 142
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.99 E-value=1.8e-09 Score=81.56 Aligned_cols=67 Identities=28% Similarity=0.297 Sum_probs=51.8
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 65 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.+.+++.+. ..++.+|||||||+|.++..+++.. ..+|+|+|+|+ +++.| +++..+++ ..+|+++++
T Consensus 39 ~~~i~~~l~--~~~~~~VLDiGcGtG~ls~~la~~g--~~~V~~vD~s~-~~~~a~~~~~~~~l---~~~v~~~~~ 106 (348)
T 2y1w_A 39 QRAILQNHT--DFKDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNNL---TDRIVVIPG 106 (348)
T ss_dssp HHHHHHTGG--GTTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-HHHHHHHHHHHTTC---TTTEEEEES
T ss_pred HHHHHhccc--cCCcCEEEEcCCCccHHHHHHHhCC--CCEEEEECCHH-HHHHHHHHHHHcCC---CCcEEEEEc
Confidence 344444444 5688999999999999999998863 34799999996 88999 88887776 346777654
No 143
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.99 E-value=9.3e-10 Score=83.15 Aligned_cols=58 Identities=31% Similarity=0.370 Sum_probs=48.6
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.++.+|||+|||+|.++..+++.. ..+|+|+|+| +|++.| +++..++. .++|+++++
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g--~~~v~gvD~s-~~l~~a~~~~~~~~~---~~~v~~~~~ 122 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAG--ARKVIGIECS-SISDYAVKIVKANKL---DHVVTIIKG 122 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTT--CSEEEEEECS-THHHHHHHHHHHTTC---TTTEEEEES
T ss_pred cCCCCEEEEEeccchHHHHHHHHCC--CCEEEEECcH-HHHHHHHHHHHHcCC---CCcEEEEEC
Confidence 4578999999999999999999883 3479999999 599999 98888876 356777664
No 144
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.99 E-value=1.5e-09 Score=81.39 Aligned_cols=66 Identities=26% Similarity=0.374 Sum_probs=51.2
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 66 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.+.+.+. +.++.+|||+|||+|.++..+++.. ..+|+|+|+| +|++.| +++..++. .++|+++++
T Consensus 28 ~ai~~~~~--~~~~~~VLDiGcGtG~ls~~la~~g--~~~v~~vD~s-~~~~~a~~~~~~~~~---~~~i~~~~~ 94 (328)
T 1g6q_1 28 NAIIQNKD--LFKDKIVLDVGCGTGILSMFAAKHG--AKHVIGVDMS-SIIEMAKELVELNGF---SDKITLLRG 94 (328)
T ss_dssp HHHHHHHH--HHTTCEEEEETCTTSHHHHHHHHTC--CSEEEEEESS-THHHHHHHHHHHTTC---TTTEEEEES
T ss_pred HHHHhhHh--hcCCCEEEEecCccHHHHHHHHHCC--CCEEEEEChH-HHHHHHHHHHHHcCC---CCCEEEEEC
Confidence 33444444 5678899999999999999999873 3479999999 699999 88888776 356777654
No 145
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.99 E-value=1.1e-09 Score=83.27 Aligned_cols=66 Identities=20% Similarity=0.231 Sum_probs=51.4
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 64 QHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 64 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+...+++.+. . .+.+|||+|||+|.+++.+++... +|+|+|+|+.+++.| +|+..++++ +++|+++
T Consensus 202 l~~~~~~~~~--~-~~~~vLDl~cG~G~~~l~la~~~~---~V~gvd~~~~ai~~a~~n~~~ng~~----~v~~~~~ 268 (369)
T 3bt7_A 202 MLEWALDVTK--G-SKGDLLELYCGNGNFSLALARNFD---RVLATEIAKPSVAAAQYNIAANHID----NVQIIRM 268 (369)
T ss_dssp HHHHHHHHTT--T-CCSEEEEESCTTSHHHHHHGGGSS---EEEEECCCHHHHHHHHHHHHHTTCC----SEEEECC
T ss_pred HHHHHHHHhh--c-CCCEEEEccCCCCHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHcCCC----ceEEEEC
Confidence 3444444443 2 367899999999999999988643 699999999999999 999888763 5777654
No 146
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.99 E-value=2.8e-09 Score=80.15 Aligned_cols=69 Identities=19% Similarity=0.169 Sum_probs=53.0
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 65 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
...+.+.+.. ..++.+|||+|||+|.+++.++.... +|++||+|+.+++.| +|+..+++. ..+++++++
T Consensus 141 ~~~l~~~~~~-~~~~~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~--~~~v~~i~~ 210 (332)
T 2igt_A 141 WEWLKNAVET-ADRPLKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLE--QAPIRWICE 210 (332)
T ss_dssp HHHHHHHHHH-SSSCCEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCT--TSCEEEECS
T ss_pred HHHHHHHHHh-cCCCCcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCC--ccceEEEEC
Confidence 3345555431 34678999999999999999998642 799999999999999 999888873 224777654
No 147
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.98 E-value=1.6e-09 Score=80.78 Aligned_cols=65 Identities=15% Similarity=0.214 Sum_probs=55.0
Q ss_pred HHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 68 VLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 68 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
....+. +.++.+|||+|||+|..+..+++..+..++|+++|+++.+++.+ +++...++. +|++++
T Consensus 94 ~~~~l~--~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~----~v~~~~ 159 (309)
T 2b9e_A 94 PAMLLD--PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS----CCELAE 159 (309)
T ss_dssp HHHHHC--CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC----SEEEEE
T ss_pred HHHHhC--CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----eEEEEe
Confidence 344555 78899999999999999999999876668999999999999999 999988874 466654
No 148
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.98 E-value=7.9e-10 Score=77.42 Aligned_cols=46 Identities=15% Similarity=0.247 Sum_probs=40.3
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
..++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.| +++..
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~ 95 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHCK---RLTVIDVMPRAIGRACQRTKR 95 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGEE---EEEEEESCHHHHHHHHHHTTT
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhccc
Confidence 45678999999999999999998853 699999999999999 87655
No 149
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.98 E-value=2.6e-09 Score=76.20 Aligned_cols=45 Identities=18% Similarity=0.324 Sum_probs=40.6
Q ss_pred ccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 75 KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
.+.++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.| +++
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~ 98 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKEN 98 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHS
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhC
Confidence 357788999999999999999999874 599999999999999 776
No 150
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.98 E-value=5.1e-10 Score=81.47 Aligned_cols=58 Identities=22% Similarity=0.205 Sum_probs=48.3
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCH-------HHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIP-------EIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~-------~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.++.+|||+|||+|.+++.++... ++|+|+|+|+ .+++.| +++..+++ ..+|+++++
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~g---~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~---~~ri~~~~~ 146 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASLG---LTVTAFEQHPAVACLLSDGIRRALLNPETQDT---AARINLHFG 146 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHTT---CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH---HTTEEEEES
T ss_pred cCCcCeEEEeeCccCHHHHHHHHhC---CEEEEEECChhhhHHHHHHHHHHHhHHHhhCC---ccCeEEEEC
Confidence 4567899999999999999999974 3599999999 999999 88877665 245887764
No 151
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.98 E-value=1.5e-09 Score=76.46 Aligned_cols=60 Identities=23% Similarity=0.325 Sum_probs=48.1
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCC-CCcEEEee
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKL-NKRIKFIC 138 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~-~~~i~~~~ 138 (140)
++++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.| +++...++... ..++++++
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 89 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASKG---YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKV 89 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEE
Confidence 5688999999999999999999883 3699999999999999 88777665322 23456554
No 152
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.97 E-value=1.6e-09 Score=76.86 Aligned_cols=62 Identities=16% Similarity=0.163 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
..+...+.+.+.....++.+|||+|||+|.++..+++.. .+++|+|+|+.|++.| +++...+
T Consensus 21 ~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~s~~~~~~a~~~~~~~~ 83 (246)
T 1y8c_A 21 KKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKF---KNTWAVDLSQEMLSEAENKFRSQG 83 (246)
T ss_dssp HHHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGS---SEEEEECSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCC---CcEEEEECCHHHHHHHHHHHhhcC
Confidence 345566666665323477899999999999999998874 3699999999999999 8876654
No 153
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.97 E-value=3.9e-09 Score=77.01 Aligned_cols=58 Identities=22% Similarity=0.275 Sum_probs=47.0
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
+.++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.| +++...+. ..++++++
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~ 120 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAG--IGEYYGVDIAEVSINDARVRARNMKR---RFKVFFRA 120 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHT--CSEEEEEESCHHHHHHHHHHHHTSCC---SSEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhcCC---CccEEEEE
Confidence 5788999999999999999988873 34799999999999999 88776654 23455554
No 154
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.97 E-value=8.3e-11 Score=84.68 Aligned_cols=58 Identities=22% Similarity=0.358 Sum_probs=50.1
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
.+.+.+.+++.+. +.++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.| +++.
T Consensus 14 ~~~~~~~i~~~~~--~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~ 72 (245)
T 1yub_A 14 SEKVLNQIIKQLN--LKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLK 72 (245)
T ss_dssp CTTTHHHHHHHCC--CCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTT
T ss_pred CHHHHHHHHHhcC--CCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhc
Confidence 4556778888876 7788999999999999999999985 4699999999999999 7764
No 155
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.97 E-value=1e-09 Score=77.81 Aligned_cols=43 Identities=28% Similarity=0.475 Sum_probs=38.8
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hc
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SN 121 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~ 121 (140)
+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.| ++
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~ 89 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQA---ARWAAYDFSPELLKLARAN 89 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHH
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHh
Confidence 5678999999999999999999883 4699999999999999 76
No 156
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.96 E-value=2e-09 Score=76.34 Aligned_cols=47 Identities=28% Similarity=0.462 Sum_probs=40.7
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
++++.+|||+|||+|.++..+++. .+++|+|+|+.+++.| +++...+
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~ 78 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN 78 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC
Confidence 556789999999999999998876 4699999999999999 8876544
No 157
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.96 E-value=3.4e-09 Score=83.34 Aligned_cols=64 Identities=17% Similarity=0.234 Sum_probs=53.9
Q ss_pred HHHHhcccC--CCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 69 LELLKDKLV--PGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 69 ~~~l~~~~~--~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
...+. +. ++.+|||+|||+|..+..+++..+..++|+|+|+|+.+++.+ +++...++. +|++++
T Consensus 108 ~~~L~--~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~----nv~~~~ 174 (479)
T 2frx_A 108 VAALF--ADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS----NVALTH 174 (479)
T ss_dssp HHHHT--TTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC----SEEEEC
T ss_pred HHHhC--cccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----cEEEEe
Confidence 34555 55 889999999999999999999976668899999999999999 999988874 465554
No 158
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.96 E-value=2.4e-09 Score=76.79 Aligned_cols=56 Identities=7% Similarity=0.111 Sum_probs=45.1
Q ss_pred HHHHHHHHH---hcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 64 QHAEVLELL---KDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 64 ~~~~~~~~l---~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
....+++.+ ...+.++.+|||+|||+|.++..+++.. .+++|+|+|+.|++.| +++
T Consensus 22 ~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~ 81 (263)
T 2yqz_A 22 VAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARG---YRYIALDADAAMLEVFRQKI 81 (263)
T ss_dssp HHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTT---CEEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCC---CEEEEEECCHHHHHHHHHHh
Confidence 445555555 2235778999999999999999998873 4699999999999999 776
No 159
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.96 E-value=1.4e-09 Score=78.43 Aligned_cols=57 Identities=25% Similarity=0.380 Sum_probs=45.5
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 64 QHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 64 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
....+.+.+...++++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.| +++.
T Consensus 36 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~ 93 (263)
T 3pfg_A 36 EAADLAALVRRHSPKAASLLDVACGTGMHLRHLADSF---GTVEGLELSADMLAIARRRNP 93 (263)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTS---SEEEEEESCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCC
Confidence 3445555555445677899999999999999998874 3699999999999999 7654
No 160
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.95 E-value=2.7e-09 Score=83.94 Aligned_cols=58 Identities=31% Similarity=0.328 Sum_probs=48.6
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
..++.+|||||||+|.++..+++. ...+|+|+|+|+ +++.| +++..+++ .++|+++++
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl---~~~v~~~~~ 214 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNL---TDRIVVIPG 214 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTC---TTTEEEEES
T ss_pred hcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCC---CCcEEEEEC
Confidence 457889999999999999999885 345799999999 99999 88888876 357887764
No 161
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.95 E-value=2.3e-09 Score=83.78 Aligned_cols=66 Identities=23% Similarity=0.196 Sum_probs=55.9
Q ss_pred HHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 67 EVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 67 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
.+...+. +.++.+|||+|||+|..+..+++..+..++|+++|+++.+++.+ +|+...++. +|.+++
T Consensus 96 l~~~~L~--~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~----nv~v~~ 162 (456)
T 3m4x_A 96 IVGTAAA--AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS----NAIVTN 162 (456)
T ss_dssp HHHHHHC--CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS----SEEEEC
T ss_pred HHHHHcC--CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----ceEEEe
Confidence 3345555 67899999999999999999999886668999999999999999 999999874 466654
No 162
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.95 E-value=7.7e-10 Score=78.56 Aligned_cols=55 Identities=20% Similarity=0.234 Sum_probs=42.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEee
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFIC 138 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~ 138 (140)
++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.| +++...+. ..++++++
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~ 121 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSSPK---AEYFSFVK 121 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTSGG---GGGEEEEC
T ss_pred CCCCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhccCC---CcceEEEE
Confidence 4459999999999999988764 45699999999999999 88765432 23455544
No 163
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.95 E-value=1.6e-09 Score=75.92 Aligned_cols=53 Identities=26% Similarity=0.296 Sum_probs=44.6
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 66 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
..+++.+. ..++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.| +++.
T Consensus 35 ~~~l~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~ 88 (220)
T 3hnr_A 35 EDILEDVV--NKSFGNVLEFGVGTGNLTNKLLLAG---RTVYGIEPSREMRMIAKEKLP 88 (220)
T ss_dssp HHHHHHHH--HTCCSEEEEECCTTSHHHHHHHHTT---CEEEEECSCHHHHHHHHHHSC
T ss_pred HHHHHHhh--ccCCCeEEEeCCCCCHHHHHHHhCC---CeEEEEeCCHHHHHHHHHhCC
Confidence 45566665 5688999999999999999999873 4699999999999999 7765
No 164
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.94 E-value=4.4e-09 Score=72.96 Aligned_cols=58 Identities=24% Similarity=0.295 Sum_probs=44.2
Q ss_pred HHHHHHHHHhc-ccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 64 QHAEVLELLKD-KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 64 ~~~~~~~~l~~-~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
....++..+.. ...++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.| +++.
T Consensus 36 ~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~ 95 (200)
T 1ne2_A 36 TAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLG--AESVTAFDIDPDAIETAKRNCG 95 (200)
T ss_dssp HHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHTT--BSEEEEEESCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhcC
Confidence 34444444321 14577899999999999999998872 34699999999999999 7764
No 165
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.94 E-value=2.2e-09 Score=84.02 Aligned_cols=59 Identities=31% Similarity=0.308 Sum_probs=51.8
Q ss_pred HHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 67 EVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 67 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
.+...+. +.++.+|||+|||+|..+..+++..+..++|+|+|+|+.+++.+ +|+...++
T Consensus 92 l~a~~L~--~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~ 151 (464)
T 3m6w_A 92 AVGVLLD--PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA 151 (464)
T ss_dssp HHHHHHC--CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC
T ss_pred HHHHhcC--cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 3445555 67899999999999999999999986668999999999999999 99998886
No 166
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.91 E-value=4.3e-09 Score=75.18 Aligned_cols=47 Identities=17% Similarity=0.256 Sum_probs=40.9
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
..++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.| +++..
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~ 138 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAG 138 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTT
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhcc
Confidence 4578899999999999999999886 34699999999999999 77643
No 167
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.91 E-value=2.2e-09 Score=76.13 Aligned_cols=55 Identities=20% Similarity=0.326 Sum_probs=44.3
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 65 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
...+++.+.. ..++.+|||||||+|.++..+++.+. +++|+|+|+.+++.| +++.
T Consensus 30 ~~~~~~~l~~-~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~ 85 (250)
T 2p7i_A 30 HPFMVRAFTP-FFRPGNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLK 85 (250)
T ss_dssp HHHHHHHHGG-GCCSSCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSC
T ss_pred HHHHHHHHHh-hcCCCcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhh
Confidence 4555666642 34678999999999999999988753 599999999999999 7654
No 168
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.91 E-value=3e-09 Score=76.21 Aligned_cols=54 Identities=17% Similarity=0.273 Sum_probs=44.5
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hc
Q psy7827 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SN 121 (140)
Q Consensus 65 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~ 121 (140)
...+++.+. +.++.+|||+|||+|.++..+++.. +..+++|+|+|+.|++.+ ++
T Consensus 22 ~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~ 76 (259)
T 2p35_A 22 ARDLLAQVP--LERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADR 76 (259)
T ss_dssp HHHHHTTCC--CSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHhcC--CCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh
Confidence 344444444 5678899999999999999999986 456799999999999999 66
No 169
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.91 E-value=5.8e-09 Score=72.50 Aligned_cols=55 Identities=20% Similarity=0.187 Sum_probs=44.7
Q ss_pred HHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 68 VLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 68 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
+...+...+.++.+|||+|||+|.++..+++... .+++|+|+|+.+++.| +++..
T Consensus 32 ~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~ 87 (215)
T 2pxx_A 32 FRALLEPELRPEDRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYAH 87 (215)
T ss_dssp HHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTTT
T ss_pred HHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhccc
Confidence 4444544467889999999999999999998853 2699999999999999 77643
No 170
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.91 E-value=5.6e-09 Score=78.79 Aligned_cols=67 Identities=21% Similarity=0.234 Sum_probs=54.1
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 66 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
..+++.+. ..++.+|||||||+|.++..+++.. +..+++++|+ +.+++.| +++...++ .++|+++.+
T Consensus 180 ~~l~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~ 247 (359)
T 1x19_A 180 QLLLEEAK--LDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGV---ADRMRGIAV 247 (359)
T ss_dssp HHHHHHCC--CTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTC---TTTEEEEEC
T ss_pred HHHHHhcC--CCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCC---CCCEEEEeC
Confidence 34444444 5678899999999999999999996 5678999999 9999999 88887776 356777654
No 171
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.90 E-value=4.4e-09 Score=80.48 Aligned_cols=59 Identities=12% Similarity=0.049 Sum_probs=49.4
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.++.+|||+|||+|.+++.++... ..+|+|+|+|+.+++.| +|+..++++ ..+++++++
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~n~~~--~~~v~~~~~ 270 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEANHLD--MANHQLVVM 270 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHHTTCC--CTTEEEEES
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCC--ccceEEEEC
Confidence 578899999999999999999863 23699999999999999 999988873 116777764
No 172
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.90 E-value=5.5e-09 Score=81.02 Aligned_cols=66 Identities=24% Similarity=0.285 Sum_probs=51.2
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 65 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
...+...+.. +.++.+|||+|||+|.++..+++... +|+|+|+|+.+++.| +|+..++++ ++|+++
T Consensus 278 ~e~l~~~~~~-~~~~~~VLDlgcG~G~~sl~la~~~~---~V~gvD~s~~ai~~A~~n~~~ngl~-----v~~~~~ 344 (425)
T 2jjq_A 278 AVNLVRKVSE-LVEGEKILDMYSGVGTFGIYLAKRGF---NVKGFDSNEFAIEMARRNVEINNVD-----AEFEVA 344 (425)
T ss_dssp HHHHHHHHHH-HCCSSEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCC-----EEEEEC
T ss_pred HHHHHHHhhc-cCCCCEEEEeeccchHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCc-----EEEEEC
Confidence 3444444432 56788999999999999999998743 699999999999999 998887762 666553
No 173
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.89 E-value=4.3e-09 Score=74.68 Aligned_cols=45 Identities=29% Similarity=0.354 Sum_probs=39.7
Q ss_pred ccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 75 KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
.++++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.| ++.
T Consensus 50 ~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~ 95 (242)
T 3l8d_A 50 YVKKEAEVLDVGCGDGYGTYKLSRTG---YKAVGVDISEVMIQKGKERG 95 (242)
T ss_dssp HSCTTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHTTT
T ss_pred HcCCCCeEEEEcCCCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhc
Confidence 35688999999999999999999883 3699999999999999 764
No 174
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.89 E-value=9.1e-09 Score=71.72 Aligned_cols=52 Identities=25% Similarity=0.392 Sum_probs=42.4
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-h
Q psy7827 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-S 120 (140)
Q Consensus 65 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~ 120 (140)
...+++.+. .+.++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.| +
T Consensus 34 ~~~~~~~l~-~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~ 86 (218)
T 3ou2_A 34 APAALERLR-AGNIRGDVLELASGTGYWTRHLSGLA---DRVTALDGSAEMIAEAGR 86 (218)
T ss_dssp HHHHHHHHT-TTTSCSEEEEESCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHGG
T ss_pred HHHHHHHHh-cCCCCCeEEEECCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHh
Confidence 344555553 25677899999999999999999983 3699999999999999 6
No 175
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.88 E-value=6.5e-09 Score=78.62 Aligned_cols=59 Identities=20% Similarity=0.152 Sum_probs=50.2
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.++.+|||+|||+|.++..+++.. +..+++++|+ +.+++.| +++...++ .++|+++++
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~ 239 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGL---ADRVTVAEG 239 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTC---TTTEEEEEC
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCC---CCceEEEeC
Confidence 5678899999999999999999986 5678999999 9999999 88887765 356777654
No 176
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.88 E-value=3.9e-09 Score=73.08 Aligned_cols=48 Identities=19% Similarity=0.178 Sum_probs=40.7
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
++++ +|||+|||+|.++..+++.. .+++|+|+|+.+++.| +++...+.
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~ 76 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASLG---YEVTAVDQSSVGLAKAKQLAQEKGV 76 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTTT---CEEEEECSSHHHHHHHHHHHHHHTC
T ss_pred CCCC-CEEEECCCCCHhHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhcCC
Confidence 4566 99999999999999998863 3799999999999999 88766543
No 177
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.88 E-value=1e-08 Score=76.28 Aligned_cols=67 Identities=21% Similarity=0.308 Sum_probs=53.3
Q ss_pred HHHHHHHhccc--CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 66 AEVLELLKDKL--VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 66 ~~~~~~l~~~~--~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
..+++.+. . .++.+|||+|||+|.++..+++.. +..+++++|++ .+++.| +++...++ .++|+++++
T Consensus 153 ~~~~~~~~--~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~---~~~v~~~~~ 222 (335)
T 2r3s_A 153 QLIAQLVN--ENKIEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGV---ASRYHTIAG 222 (335)
T ss_dssp HHHHHHHT--C--CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTC---GGGEEEEES
T ss_pred HHHHHhcc--cccCCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCC---CcceEEEec
Confidence 34445554 4 677899999999999999999986 56789999999 999999 88877765 345776653
No 178
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.88 E-value=8.4e-09 Score=71.62 Aligned_cols=58 Identities=16% Similarity=0.072 Sum_probs=42.5
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 66 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
..+++.+. ...++.+|||+|||+|..+..++... ..+++|+|+|+.|++.| +++...+
T Consensus 12 ~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~ 70 (209)
T 2p8j_A 12 YRFLKYCN-ESNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENN 70 (209)
T ss_dssp HHHHHHHH-HSSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHh-ccCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcC
Confidence 34444443 25678899999999999855544442 34799999999999999 8776543
No 179
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.87 E-value=1.1e-08 Score=79.65 Aligned_cols=61 Identities=20% Similarity=0.244 Sum_probs=51.4
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCC
Q psy7827 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYP 128 (140)
Q Consensus 66 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~ 128 (140)
..+...+. +.++.+|||+|||+|..+..+++..+..++|+++|+++.+++.+ +++...++.
T Consensus 249 ~l~~~~l~--~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~ 310 (450)
T 2yxl_A 249 AVASIVLD--PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK 310 (450)
T ss_dssp HHHHHHHC--CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhcC--CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC
Confidence 33345555 77889999999999999999999875447899999999999999 998887763
No 180
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.87 E-value=9.3e-09 Score=78.76 Aligned_cols=74 Identities=19% Similarity=0.140 Sum_probs=57.6
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCC-------------------------------------C
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGK-------------------------------------N 103 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-------------------------------------~ 103 (140)
.+.+.+.++.... ..++.+|||.+||+|.+++.++..... .
T Consensus 180 ~e~lAa~ll~~~~--~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 180 RETLAAGLIYLTP--WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp CHHHHHHHHHTSC--CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred cHHHHHHHHHhhC--CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 3445555555554 667889999999999999998877521 1
Q ss_pred CeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 104 GSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 104 ~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.+|+|+|+++.+++.| +|+..+++ .++|+|.++
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl---~~~i~~~~~ 291 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGV---DEYIEFNVG 291 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTC---GGGEEEEEC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCC---CCceEEEEC
Confidence 4699999999999999 99998887 346777654
No 181
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.87 E-value=7.6e-09 Score=79.17 Aligned_cols=48 Identities=38% Similarity=0.421 Sum_probs=42.8
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
.++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.| +++..+++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g---~~V~gvDis~~al~~A~~n~~~~~~ 280 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMG---AEVVGVEDDLASVLSLQKGLEANAL 280 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTT---CEEEEEESBHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCC
Confidence 367899999999999999999873 3799999999999999 99887765
No 182
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.86 E-value=5.1e-09 Score=74.99 Aligned_cols=45 Identities=24% Similarity=0.367 Sum_probs=39.6
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
.++.+|||+|||+|.++..+++... .+++|+|+|+.+++.| +++.
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~ 88 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTT 88 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhc
Confidence 4788999999999999999998853 2799999999999999 7754
No 183
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.86 E-value=1.5e-08 Score=77.82 Aligned_cols=74 Identities=18% Similarity=0.134 Sum_probs=58.0
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCC-------------------------------------C
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGK-------------------------------------N 103 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-------------------------------------~ 103 (140)
.+.+.+.++.... ..++..|||.+||+|.+++.++..... .
T Consensus 186 ~e~lAa~ll~l~~--~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 186 KETMAAALVLLTS--WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp CHHHHHHHHHHSC--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred cHHHHHHHHHHhC--CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 4556666666655 677889999999999999988876532 1
Q ss_pred CeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 104 GSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 104 ~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.+|+|+|+++.|++.| +|+..+++. ++|+++++
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~---~~I~~~~~ 297 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLG---DLITFRQL 297 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCT---TCSEEEEC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCC---CceEEEEC
Confidence 4699999999999999 999998873 45776653
No 184
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.86 E-value=4.5e-09 Score=71.54 Aligned_cols=49 Identities=18% Similarity=0.255 Sum_probs=39.3
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHH
Q psy7827 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNH 118 (140)
Q Consensus 66 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~ 118 (140)
..+++.+.....++.+|||+|||+|.++..+++.+ +++|+|+|+.|++.
T Consensus 11 ~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~ 59 (170)
T 3q87_B 11 YTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES 59 (170)
T ss_dssp HHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT
T ss_pred HHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc
Confidence 34455555112577899999999999999999875 59999999999986
No 185
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.85 E-value=1.2e-08 Score=75.51 Aligned_cols=59 Identities=20% Similarity=0.219 Sum_probs=44.3
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 65 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
...+++.+...+.++.+|||+|||+|.++..+++. ...+++|+|+|+.|++.| ++....
T Consensus 21 ~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~ 80 (313)
T 3bgv_A 21 IGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDM 80 (313)
T ss_dssp HHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHh
Confidence 34444544422347889999999999999999875 355899999999999999 876543
No 186
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.85 E-value=5.3e-09 Score=76.68 Aligned_cols=46 Identities=30% Similarity=0.483 Sum_probs=40.0
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcC-CHHHHHHH-hchh
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEH-IPEIVNHA-SNVT 123 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~-s~~~i~~a-~~~~ 123 (140)
..++.+|||+|||+|.+++.+++.. ..+|+|+|+ |+.+++.| +++.
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~~--~~~v~~~D~s~~~~~~~a~~n~~ 124 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLAG--ADQVVATDYPDPEILNSLESNIR 124 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHTT--CSEEEEEECSCHHHHHHHHHHHH
T ss_pred hcCCCeEEEecccccHHHHHHHHcC--CCEEEEEeCCCHHHHHHHHHHHH
Confidence 3578899999999999999988864 247999999 89999999 8883
No 187
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.85 E-value=3.4e-09 Score=79.75 Aligned_cols=60 Identities=23% Similarity=0.266 Sum_probs=49.6
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 65 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
.+.+++.+. ..++.+|||+|||+|.++..+++.. +..+++++|+|+.+++.| +++..+++
T Consensus 185 ~~~ll~~l~--~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~ 245 (343)
T 2pjd_A 185 SQLLLSTLT--PHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGV 245 (343)
T ss_dssp HHHHHHHSC--TTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcC--cCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCC
Confidence 455566654 4467799999999999999999985 556899999999999999 88877665
No 188
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.84 E-value=8.9e-09 Score=72.82 Aligned_cols=55 Identities=22% Similarity=0.483 Sum_probs=44.6
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 65 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
...+.+.+.....++.+|||+|||+|.++..+++.+. +++|+|+|+.|++.| +++
T Consensus 27 ~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~ 82 (239)
T 3bxo_A 27 ASDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRL 82 (239)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhC
Confidence 3344455543346788999999999999999999874 599999999999999 764
No 189
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.84 E-value=2.9e-09 Score=71.83 Aligned_cols=49 Identities=10% Similarity=0.163 Sum_probs=42.2
Q ss_pred HHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hc
Q psy7827 68 VLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SN 121 (140)
Q Consensus 68 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~ 121 (140)
+++.+. +.++.+|||+|||+|.++..+++... +++|+|+++.+++.+ ++
T Consensus 9 ~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~ 58 (170)
T 3i9f_A 9 YLPNIF--EGKKGVIVDYGCGNGFYCKYLLEFAT---KLYCIDINVIALKEVKEK 58 (170)
T ss_dssp THHHHH--SSCCEEEEEETCTTCTTHHHHHTTEE---EEEEECSCHHHHHHHHHH
T ss_pred HHHhcC--cCCCCeEEEECCCCCHHHHHHHhhcC---eEEEEeCCHHHHHHHHHh
Confidence 345555 67888999999999999999998863 699999999999999 66
No 190
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.84 E-value=4.1e-09 Score=75.10 Aligned_cols=46 Identities=20% Similarity=0.175 Sum_probs=40.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.| +++...
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~ 125 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEE 125 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhc
Confidence 57899999999999999988875 34799999999999999 887665
No 191
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.84 E-value=3.7e-09 Score=75.92 Aligned_cols=48 Identities=25% Similarity=0.309 Sum_probs=40.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
++.+|||+|||+|.++..+++.. .+..+|+|+|+|+.+++.| +++...
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~ 100 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALL 100 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTT
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHh
Confidence 56799999999999999999872 1345799999999999999 887655
No 192
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.83 E-value=8.3e-09 Score=75.09 Aligned_cols=52 Identities=33% Similarity=0.608 Sum_probs=43.9
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 66 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
..+++.+. +.++.+|||+|||+|.++..+++. .++++|+|+|+.|++.| +++
T Consensus 47 ~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~ 99 (279)
T 3ccf_A 47 EDLLQLLN--PQPGEFILDLGCGTGQLTEKIAQS---GAEVLGTDNAATMIEKARQNY 99 (279)
T ss_dssp CHHHHHHC--CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHhC--CCCCCEEEEecCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHhhC
Confidence 44556665 678899999999999999999983 45799999999999999 764
No 193
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.83 E-value=2e-08 Score=76.22 Aligned_cols=59 Identities=19% Similarity=0.242 Sum_probs=50.8
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
..++.+|||+|||+|.++..+++.. +..+++++|+ +.+++.| +++...++ .++|+++.+
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l---~~~v~~~~~ 259 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGL---ADRCEILPG 259 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTC---TTTEEEEEC
T ss_pred CccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCc---CCceEEecc
Confidence 4567899999999999999999996 5678999999 9999999 88888776 467887764
No 194
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.83 E-value=1.2e-08 Score=76.81 Aligned_cols=59 Identities=24% Similarity=0.271 Sum_probs=50.0
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.++.+|||+|||+|.++..+++.. +..+++++|+ +.+++.| +++...++ .++|+++++
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~ 240 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGL---SDRVDVVEG 240 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTC---TTTEEEEEC
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCC---CCceEEEeC
Confidence 5677899999999999999999986 5678999999 9999999 88887766 356777654
No 195
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.83 E-value=4.7e-09 Score=80.95 Aligned_cols=57 Identities=21% Similarity=0.256 Sum_probs=48.2
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc--CCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL--HYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~--~~~~~~~~i~~~~g 139 (140)
+.++.+|||+|||+|..+..+++.. .+|++||+|+.|++.| +|+..+ ++ .+|+++++
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~g---~~V~~VD~s~~~l~~Ar~N~~~~~~gl----~~i~~i~~ 150 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSKA---SQGIYIERNDETAVAARHNIPLLLNEG----KDVNILTG 150 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTTC---SEEEEEESCHHHHHHHHHHHHHHSCTT----CEEEEEES
T ss_pred cCCCCEEEEeCCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHhHHHhccCC----CcEEEEEC
Confidence 3458999999999999999998774 3699999999999999 999877 65 36777764
No 196
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.82 E-value=2.8e-08 Score=76.09 Aligned_cols=74 Identities=18% Similarity=0.167 Sum_probs=58.4
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCC-------------------------------------C
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGK-------------------------------------N 103 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-------------------------------------~ 103 (140)
.+.+.+.++.... ..++..+||.+||+|.+++.++..... .
T Consensus 179 ~e~LAaall~l~~--~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 256 (384)
T 3ldg_A 179 KENMAAAIILLSN--WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQ 256 (384)
T ss_dssp CHHHHHHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred cHHHHHHHHHHhC--CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCC
Confidence 3455666666655 678899999999999999988876532 1
Q ss_pred CeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 104 GSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 104 ~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.+++|+|+++.|++.| +|+..+++ .++|+++++
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl---~~~I~~~~~ 290 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGL---EDVVKLKQM 290 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEEC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCC---CCceEEEEC
Confidence 4699999999999999 99999987 356777654
No 197
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.82 E-value=7.8e-09 Score=72.32 Aligned_cols=52 Identities=27% Similarity=0.360 Sum_probs=43.2
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hc
Q psy7827 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SN 121 (140)
Q Consensus 65 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~ 121 (140)
...++..+. ..++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.| ++
T Consensus 41 ~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~ 93 (227)
T 3e8s_A 41 DQAILLAIL--GRQPERVLDLGCGEGWLLRALADRG---IEAVGVDGDRTLVDAARAA 93 (227)
T ss_dssp HHHHHHHHH--HTCCSEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHT
T ss_pred cHHHHHHhh--cCCCCEEEEeCCCCCHHHHHHHHCC---CEEEEEcCCHHHHHHHHHh
Confidence 345556665 5677999999999999999998873 3699999999999999 66
No 198
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.82 E-value=1.2e-08 Score=72.27 Aligned_cols=54 Identities=19% Similarity=0.343 Sum_probs=43.5
Q ss_pred HHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 67 EVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 67 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.+...+. ..++.+|||+|||+|.++..+++... .+++|+|+|+.+++.| ++...
T Consensus 34 ~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~ 88 (243)
T 3bkw_A 34 ALRAMLP--EVGGLRIVDLGCGFGWFCRWAHEHGA--SYVLGLDLSEKMLARARAAGPD 88 (243)
T ss_dssp HHHHHSC--CCTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTSCS
T ss_pred HHHHhcc--ccCCCEEEEEcCcCCHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHhccc
Confidence 3444444 45788999999999999999998742 3799999999999999 77643
No 199
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.82 E-value=1.6e-08 Score=77.47 Aligned_cols=58 Identities=29% Similarity=0.407 Sum_probs=49.3
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+++.+|||+|||+|.++..++... ..+|+|+|+|+.+++.| +++..+++. ++++++++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g--~~~v~~vD~s~~~l~~a~~n~~~n~~~---~~v~~~~~ 274 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAG--ADEVIGIDKSPRAIETAKENAKLNGVE---DRMKFIVG 274 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCG---GGEEEEES
T ss_pred hCCCeEEEecCCCCHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCC---ccceEEEC
Confidence 478899999999999999999873 34799999999999999 999888763 36777664
No 200
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.81 E-value=8e-09 Score=72.06 Aligned_cols=44 Identities=30% Similarity=0.489 Sum_probs=39.2
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
+.++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.| +++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~ 85 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAAG---FDVDATDGSPELAAEASRRL 85 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHcC---CeEEEECCCHHHHHHHHHhc
Confidence 5678899999999999999999873 3699999999999999 764
No 201
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.81 E-value=8.4e-09 Score=73.45 Aligned_cols=43 Identities=19% Similarity=0.309 Sum_probs=38.3
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hc
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SN 121 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~ 121 (140)
++++.+|||||||+|.++..+++... +++|+|+|+.+++.| ++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~ 82 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK 82 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh
Confidence 46789999999999999999998743 599999999999999 65
No 202
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.81 E-value=2.8e-08 Score=72.67 Aligned_cols=55 Identities=18% Similarity=0.228 Sum_probs=42.6
Q ss_pred CCCEEEEEcCCC---ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 78 PGAKVLDVGSGS---GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 78 ~~~~vLDiGcG~---G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
...+|||||||+ |.++..+++.. +.++|+++|+|+.|++.| +++.. ..+++++++
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~-p~~~v~~vD~sp~~l~~Ar~~~~~------~~~v~~~~~ 135 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVN-PDARVVYVDIDPMVLTHGRALLAK------DPNTAVFTA 135 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHC-TTCEEEEEESSHHHHHHHHHHHTT------CTTEEEEEC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhC-CCCEEEEEECChHHHHHHHHhcCC------CCCeEEEEe
Confidence 347999999999 99887766654 667899999999999999 77642 135666543
No 203
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.81 E-value=4.7e-09 Score=77.91 Aligned_cols=47 Identities=15% Similarity=0.126 Sum_probs=38.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
++.+|||||||+|..+..++... .++|+|+|+|+.|++.| ++....+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~~~~~ 95 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERYNKLN 95 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHHHhcc
Confidence 47899999999998776666542 35799999999999999 8776544
No 204
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.80 E-value=2.2e-08 Score=75.78 Aligned_cols=58 Identities=21% Similarity=0.215 Sum_probs=49.2
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
....+|||||||+|.++..+++.. +..+++++|+ +.+++.| +++...++ .++|+++.+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~ 236 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSG---SERIHGHGA 236 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTT---GGGEEEEEC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCc---ccceEEEEc
Confidence 456899999999999999999986 5678999999 9999999 88877765 357777654
No 205
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.80 E-value=3.4e-09 Score=75.91 Aligned_cols=55 Identities=18% Similarity=0.226 Sum_probs=42.8
Q ss_pred HHHHHHHHhccc-CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 65 HAEVLELLKDKL-VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 65 ~~~~~~~l~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
...+++.+. + .++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.| ++..
T Consensus 25 L~~~L~~~~--~~~~g~~VLDiGcGtG~~t~~la~~g--~~~V~gvDis~~ml~~a~~~~~ 81 (232)
T 3opn_A 25 LEKALKEFH--LEINGKTCLDIGSSTGGFTDVMLQNG--AKLVYALDVGTNQLAWKIRSDE 81 (232)
T ss_dssp HHHHHHHTT--CCCTTCEEEEETCTTSHHHHHHHHTT--CSEEEEECSSCCCCCHHHHTCT
T ss_pred HHHHHHHcC--CCCCCCEEEEEccCCCHHHHHHHhcC--CCEEEEEcCCHHHHHHHHHhCc
Confidence 344555554 3 356799999999999999999884 23799999999999998 7543
No 206
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.79 E-value=1.2e-08 Score=73.64 Aligned_cols=52 Identities=25% Similarity=0.277 Sum_probs=41.7
Q ss_pred HHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 69 LELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 69 ~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
.+.+...+.++.+|||+|||+|.++..+++.. .+++|+|+|+.|++.| ++..
T Consensus 45 ~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~ 97 (260)
T 2avn_A 45 GSFLEEYLKNPCRVLDLGGGTGKWSLFLQERG---FEVVLVDPSKEMLEVAREKGV 97 (260)
T ss_dssp HHHHHHHCCSCCEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHHTC
T ss_pred HHHHHHhcCCCCeEEEeCCCcCHHHHHHHHcC---CeEEEEeCCHHHHHHHHhhcC
Confidence 33343334578899999999999999998873 3699999999999999 7643
No 207
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.79 E-value=1.9e-08 Score=75.75 Aligned_cols=61 Identities=18% Similarity=0.217 Sum_probs=48.3
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc--CCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL--HYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~--~~~~~~~~i~~~~g 139 (140)
..++.+|||||||+|.++..+++.. +..+|++||+|+.+++.| +++... ++. ..+++++++
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~--~~rv~~~~~ 181 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYE--DPRVNLVIG 181 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGG--STTEEEEES
T ss_pred CCCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccC--CCcEEEEEC
Confidence 3567899999999999999999874 456899999999999999 888653 321 346777654
No 208
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.78 E-value=7.1e-09 Score=77.96 Aligned_cols=57 Identities=14% Similarity=0.202 Sum_probs=48.6
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.++.+|||+|||+|.+++. ++. ..+|+|+|+|+.+++.| +|+..+++ ..+++++++
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~~---~~~V~~vD~s~~ai~~a~~n~~~n~l---~~~v~~~~~ 250 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CKN---AKKIYAIDINPHAIELLKKNIKLNKL---EHKIIPILS 250 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TTT---SSEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEES
T ss_pred cCCCCEEEEccCccCHHHHh-ccC---CCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEEC
Confidence 46789999999999999999 762 45799999999999999 99998887 346877764
No 209
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.78 E-value=1.5e-08 Score=77.71 Aligned_cols=58 Identities=22% Similarity=0.205 Sum_probs=49.0
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC-CCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY-PKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~-~~~~~~i~~~~g 139 (140)
.++.+|||+|||+|.++..++... ..+|+|+|+|+.+++.| +|+..+++ . ++++++++
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~---~~v~~~~~ 278 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDL---SKAEFVRD 278 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCG---GGEEEEES
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCc---cceEEEEC
Confidence 578899999999999999999874 34799999999999999 99988876 3 25777654
No 210
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.77 E-value=1.9e-08 Score=77.96 Aligned_cols=64 Identities=19% Similarity=0.233 Sum_probs=53.2
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
+......+...+. +.++.+|||+|||+|..+..+++..+ +++|+|+|+++.+++.+ +++...++
T Consensus 231 qd~~s~~~~~~l~--~~~g~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~g~ 295 (429)
T 1sqg_A 231 QDASAQGCMTWLA--PQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGM 295 (429)
T ss_dssp CCHHHHTHHHHHC--CCTTCEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHTTC
T ss_pred eCHHHHHHHHHcC--CCCcCeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHcCC
Confidence 3444445556666 77889999999999999999999873 47899999999999999 99888775
No 211
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.77 E-value=2.1e-08 Score=74.36 Aligned_cols=62 Identities=13% Similarity=0.088 Sum_probs=46.9
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+++.+|||||||+|.++..+++.. +..+++++|+|+.+++.| +++...+......+++++.+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~ 156 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVG 156 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEEC
Confidence 567899999999999999999763 456899999999999999 88743211011346777654
No 212
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.77 E-value=2.6e-09 Score=77.49 Aligned_cols=47 Identities=13% Similarity=0.079 Sum_probs=37.8
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
..++.+|||||||+|.++..++.... .+|+|+|+|+.|++.| +++..
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~--~~v~g~D~s~~~l~~a~~~~~~ 100 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSF--QDITLSDFTDRNREELEKWLKK 100 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhh--cceeeccccHHHHHHHHHHHhc
Confidence 45778999999999988877665431 2699999999999999 76544
No 213
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.76 E-value=1.2e-08 Score=75.47 Aligned_cols=48 Identities=19% Similarity=0.178 Sum_probs=42.0
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
+++.+|||||||+|..+..+++.. +..+|++||+|+.+++.| +++...
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~ 130 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNH 130 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHH
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhc
Confidence 567899999999999999999874 456899999999999999 888654
No 214
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.76 E-value=8.7e-09 Score=75.40 Aligned_cols=58 Identities=12% Similarity=0.088 Sum_probs=41.1
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 64 QHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 64 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
....+.+.+.....++.+|||||||+|..+..++... ..+|+|+|+|+.|++.| +++.
T Consensus 57 ~~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~--~~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 57 KLRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSH--FEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp HHHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGG--CSEEEEECSCHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccC--CCeEEEeCCCHHHHHHHHHHHh
Confidence 3455556554222367899999999999554444432 34799999999999999 7554
No 215
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.76 E-value=1.8e-08 Score=74.00 Aligned_cols=45 Identities=18% Similarity=0.176 Sum_probs=40.1
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
..++.+|||||||+|.++..+++. +..++++||+++.+++.| +++
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~ 118 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI 118 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH
Confidence 356789999999999999999887 356899999999999999 887
No 216
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.76 E-value=1.9e-08 Score=77.24 Aligned_cols=50 Identities=24% Similarity=0.180 Sum_probs=44.3
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCC
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYP 128 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~ 128 (140)
.+++.+|||+|||+|.+++.++.... +|+++|+|+.+++.| +|+..+++.
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~ga---~V~avDis~~al~~a~~n~~~ng~~ 262 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARKGA---YALAVDKDLEALGVLDQAALRLGLR 262 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCC
T ss_pred hcCCCeEEEcccchhHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHhCCC
Confidence 45689999999999999999998742 499999999999999 999888874
No 217
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.76 E-value=2e-08 Score=75.45 Aligned_cols=59 Identities=14% Similarity=0.179 Sum_probs=49.3
Q ss_pred cCC-CCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVP-GAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~-~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.+ +.+|||||||+|.++..+++.+ +..+++++|+ +.+++.| +++...++ .++|+++.+
T Consensus 176 ~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~ 236 (352)
T 3mcz_A 176 VFARARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHDL---GGRVEFFEK 236 (352)
T ss_dssp GGTTCCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTC---GGGEEEEEC
T ss_pred CcCCCCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcCC---CCceEEEeC
Confidence 345 7899999999999999999986 5678999999 8899999 88887766 356777654
No 218
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.76 E-value=1.8e-08 Score=75.43 Aligned_cols=61 Identities=18% Similarity=0.220 Sum_probs=48.1
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc--CCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL--HYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~--~~~~~~~~i~~~~g 139 (140)
..++.+|||+|||+|.++..+++.. +..+++++|+|+.+++.| +++... +++ ..+++++++
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~--~~~v~~~~~ 177 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYE--DKRVNVFIE 177 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGG--STTEEEEES
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccC--CCcEEEEEc
Confidence 3567899999999999999998764 456899999999999999 887652 221 346777654
No 219
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.74 E-value=6.8e-08 Score=73.49 Aligned_cols=57 Identities=5% Similarity=0.096 Sum_probs=48.2
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.++.+|||+| |+|.++..++... +..+|+|+|+|+.|++.| +++..+++. +|+++++
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~-~~~~v~~vDi~~~~l~~a~~~~~~~g~~----~v~~~~~ 228 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSG-LPKRIAVLDIDERLTKFIEKAANEIGYE----DIEIFTF 228 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHT-CCSEEEEECSCHHHHHHHHHHHHHHTCC----CEEEECC
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCC----CEEEEEC
Confidence 3678999999 9999999998874 446899999999999999 999888762 5777654
No 220
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.74 E-value=1.7e-08 Score=75.01 Aligned_cols=60 Identities=18% Similarity=0.227 Sum_probs=47.8
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh--cCCCCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT--LHYPKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~--~~~~~~~~~i~~~~g 139 (140)
.++.+|||||||+|.++..+++.. +..++++||+++.+++.| +++.. .+++ ..+++++++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~--~~rv~v~~~ 156 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYS--SSKLTLHVG 156 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGG--CTTEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccC--CCcEEEEEC
Confidence 567899999999999999999874 456899999999999999 88765 2321 346777654
No 221
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.73 E-value=2.3e-08 Score=74.69 Aligned_cols=61 Identities=15% Similarity=0.222 Sum_probs=48.4
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc--CCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL--HYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~--~~~~~~~~i~~~~g 139 (140)
..++.+|||||||+|.++..+++.. +..+++++|+++.+++.| +++... ++. ..+++++++
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~--~~rv~~~~~ 169 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFS--HPKLDLFCG 169 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGG--CTTEEEECS
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccC--CCCEEEEEC
Confidence 3567899999999999999999864 456899999999999999 887654 221 346777654
No 222
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.73 E-value=2.8e-08 Score=73.51 Aligned_cols=60 Identities=15% Similarity=0.120 Sum_probs=47.2
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh--cCCCCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT--LHYPKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~--~~~~~~~~~i~~~~g 139 (140)
.++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.| +++.. .+.. ..+++++++
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~--~~~v~~~~~ 151 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFD--DPRAEIVIA 151 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGG--CTTEEEEES
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccC--CCceEEEEC
Confidence 456899999999999999999874 356899999999999999 88764 2221 246777654
No 223
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.73 E-value=3e-08 Score=81.19 Aligned_cols=59 Identities=17% Similarity=0.079 Sum_probs=50.0
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.++.+|||+|||+|.+++.++... ..+|++||+|+.+++.| +|+..+++. .++++++++
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~g--a~~V~aVD~s~~al~~a~~N~~~ngl~--~~~v~~i~~ 597 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGG--ARSTTTVDMSRTYLEWAERNLRLNGLT--GRAHRLIQA 597 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCC--STTEEEEES
T ss_pred cCCCcEEEeeechhHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCC--ccceEEEec
Confidence 468899999999999999998853 24699999999999999 999998874 257888764
No 224
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.73 E-value=1.5e-08 Score=77.42 Aligned_cols=55 Identities=24% Similarity=0.231 Sum_probs=47.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
++.+|||+|||+|.++..++... .+|+|+|+|+.+++.| +|+..+++. +++++++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~n~~~n~~~----~~~~~~~ 264 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGF---REVVAVDSSAEALRRAEENARLNGLG----NVRVLEA 264 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHE---EEEEEEESCHHHHHHHHHHHHHTTCT----TEEEEES
T ss_pred CCCeEEEeeeccCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCC----CceEEEC
Confidence 77899999999999999999883 3699999999999999 999988874 3777654
No 225
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.73 E-value=2e-08 Score=69.52 Aligned_cols=42 Identities=31% Similarity=0.430 Sum_probs=37.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
.+.+|||+|||+|.++..+++... +++|+|+|+.|++.| ++.
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~ 83 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTH 83 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHC
T ss_pred CCCeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhC
Confidence 388999999999999999998843 599999999999999 763
No 226
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.73 E-value=3.4e-08 Score=71.32 Aligned_cols=56 Identities=25% Similarity=0.472 Sum_probs=44.2
Q ss_pred HHHHHHHhccc-CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 66 AEVLELLKDKL-VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 66 ~~~~~~l~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
..+.+.+...+ .++.+|||+|||+|.++..+++.. +..+++|+|+|+.+++.| ++.
T Consensus 72 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~ 129 (269)
T 1p91_A 72 DAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY 129 (269)
T ss_dssp HHHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC
Confidence 33444443223 578899999999999999999985 456899999999999999 764
No 227
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.72 E-value=2.2e-08 Score=73.32 Aligned_cols=60 Identities=13% Similarity=0.160 Sum_probs=47.7
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc--CCCCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL--HYPKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~--~~~~~~~~i~~~~g 139 (140)
.++.+|||||||+|.++..+++.. +..+|++||+++.+++.| +++... +.. ..+++++++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~--~~rv~v~~~ 136 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLD--DPRVDVQVD 136 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTT--STTEEEEES
T ss_pred CCCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccC--CCceEEEEC
Confidence 467899999999999999998763 346899999999999999 887653 222 357877764
No 228
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.72 E-value=3.3e-08 Score=74.36 Aligned_cols=51 Identities=16% Similarity=0.145 Sum_probs=43.3
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCC----CeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKN----GSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~----~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
.++.+|||+|||+|.++..+++..... .+++|+|+++.+++.| .++...++
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~ 184 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ 184 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC
Confidence 456799999999999999999887422 6799999999999999 88776654
No 229
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.72 E-value=1.1e-08 Score=74.48 Aligned_cols=52 Identities=15% Similarity=0.208 Sum_probs=46.4
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCC
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYP 128 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~ 128 (140)
+.+..+|||||||+|-++..++... +..+++++|+++.|++.+ .++..+++.
T Consensus 130 i~~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~~ 182 (281)
T 3lcv_B 130 LPRPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNVP 182 (281)
T ss_dssp SCCCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCC
Confidence 4567899999999999999998874 678999999999999999 999888873
No 230
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.72 E-value=3.3e-08 Score=73.75 Aligned_cols=58 Identities=19% Similarity=0.182 Sum_probs=49.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.+..+|||+|||+|.++..+++.. +..+++++|+ +.+++.| +++...++ .++|+++.+
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~ 226 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGL---SGRAQVVVG 226 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTC---TTTEEEEEC
T ss_pred CCCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCc---CcCeEEecC
Confidence 346799999999999999999986 5678999999 9999999 88888776 467887654
No 231
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.71 E-value=2.3e-08 Score=74.57 Aligned_cols=58 Identities=22% Similarity=0.322 Sum_probs=47.8
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.+ .+|||+|||+|..+..+++.. +..+++++|+ +.+++.| +++...++ .++|+++.+
T Consensus 166 ~~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~ 224 (334)
T 2ip2_A 166 FRG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLA---GERVSLVGG 224 (334)
T ss_dssp CTT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHH---TTSEEEEES
T ss_pred CCC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCC---CCcEEEecC
Confidence 445 899999999999999999986 5678999999 9999999 88876654 346776654
No 232
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.70 E-value=7.9e-08 Score=69.29 Aligned_cols=47 Identities=17% Similarity=0.119 Sum_probs=41.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
.++.+|||||||+|-++.++. +..+++|+|+++.|++.+ +++..++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~ 151 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDW 151 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTC
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCC
Confidence 567899999999999999887 456899999999999999 88877665
No 233
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.69 E-value=4.5e-08 Score=66.76 Aligned_cols=45 Identities=27% Similarity=0.458 Sum_probs=39.8
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
++++.+|||+|||+|.++..+++.. .+++|+|+++.+++.+ +++.
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~ 89 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQG---HDVLGTDLDPILIDYAKQDFP 89 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCT
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCC---CcEEEEcCCHHHHHHHHHhCC
Confidence 5688999999999999999999873 3699999999999999 7653
No 234
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.69 E-value=5.3e-08 Score=72.79 Aligned_cols=55 Identities=16% Similarity=0.229 Sum_probs=45.1
Q ss_pred CEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 80 AKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 80 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.+|||||||+|.++..+++.. +..++++||+++.+++.| +++.... ..+++++++
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~~----~~rv~v~~~ 146 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIPR----APRVKIRVD 146 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCCC----TTTEEEEES
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhccccC----CCceEEEEC
Confidence 399999999999999999975 456899999999999999 8875432 346777654
No 235
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.68 E-value=6.7e-08 Score=67.24 Aligned_cols=48 Identities=31% Similarity=0.473 Sum_probs=37.9
Q ss_pred HHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 70 ELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 70 ~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
+.+...+.++.+|||+|||+|.++..+ .. .+++|+|+|+.+++.| +++
T Consensus 28 ~~l~~~~~~~~~vLdiG~G~G~~~~~l---~~--~~v~~vD~s~~~~~~a~~~~ 76 (211)
T 2gs9_A 28 RALKGLLPPGESLLEVGAGTGYWLRRL---PY--PQKVGVEPSEAMLAVGRRRA 76 (211)
T ss_dssp HHHHTTCCCCSEEEEETCTTCHHHHHC---CC--SEEEEECCCHHHHHHHHHHC
T ss_pred HHHHHhcCCCCeEEEECCCCCHhHHhC---CC--CeEEEEeCCHHHHHHHHHhC
Confidence 344433457889999999999998877 11 2699999999999999 764
No 236
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.68 E-value=1.3e-08 Score=75.21 Aligned_cols=41 Identities=15% Similarity=0.135 Sum_probs=36.2
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-h
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-S 120 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~ 120 (140)
++.+|||+|||||.++..+++.. .++|+|||+|+.|++.+ +
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~g--a~~V~aVDvs~~mL~~a~r 126 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNG--AKLVYAVDVGTNQLVWKLR 126 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CSEEEEECSSSSCSCHHHH
T ss_pred cccEEEecCCCccHHHHHHHhCC--CCEEEEEECCHHHHHHHHH
Confidence 56799999999999999998874 34799999999999886 5
No 237
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.68 E-value=4e-08 Score=72.17 Aligned_cols=63 Identities=16% Similarity=0.144 Sum_probs=48.1
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
.+++.+|||+|||+|..+..+++.. +..+++++|+++.+++.| +++...+...-..+++++++
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~ 139 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE 139 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEEC
Confidence 3567899999999999999998764 456899999999999999 88765431110346777654
No 238
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.68 E-value=3.5e-08 Score=72.40 Aligned_cols=48 Identities=21% Similarity=0.206 Sum_probs=36.0
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHh---CCCCeE--EEEcCCHHHHHHH-hchhh
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMV---GKNGSV--VGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~---~~~~~v--~gvD~s~~~i~~a-~~~~~ 124 (140)
.++.+|||||||+|.++..++... .+...+ +|+|+|++|++.| +++..
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~ 104 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAK 104 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHh
Confidence 456799999999998776544322 134544 9999999999999 77654
No 239
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.68 E-value=2.7e-08 Score=76.35 Aligned_cols=43 Identities=14% Similarity=0.254 Sum_probs=38.2
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hc
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SN 121 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~ 121 (140)
+.++.+|||||||+|.++..+++... +++|+|+|+.|++.| ++
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~ 148 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREK 148 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTT
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHc
Confidence 46788999999999999999998743 699999999999999 65
No 240
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.67 E-value=5e-08 Score=72.69 Aligned_cols=61 Identities=20% Similarity=0.190 Sum_probs=47.7
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc--C-CCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL--H-YPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~--~-~~~~~~~i~~~~g 139 (140)
.+++.+|||||||+|..+..+++.. +..++++||+++.+++.| +++... + .+ ..+++++++
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~--~~~v~~~~~ 139 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFD--DPRAVLVID 139 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGG--CTTEEEEES
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhcccccc--CCceEEEEc
Confidence 3567899999999999999998864 456899999999999999 887652 1 11 246777654
No 241
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.65 E-value=7.7e-08 Score=70.61 Aligned_cols=65 Identities=26% Similarity=0.405 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
|.+.+.+++.+. +++++.++|.+||.|..|..+++. +++|+|+|.++.+++.| + +.. ++++++++
T Consensus 8 pVLl~e~le~L~--~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~-------~rv~lv~~ 73 (285)
T 1wg8_A 8 PVLYQEALDLLA--VRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL-------PGLTVVQG 73 (285)
T ss_dssp CTTHHHHHHHHT--CCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC-------TTEEEEES
T ss_pred hHHHHHHHHhhC--CCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc-------CCEEEEEC
Confidence 446778888887 888999999999999999999997 46799999999999999 7 533 26777764
No 242
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.64 E-value=1e-07 Score=69.86 Aligned_cols=57 Identities=19% Similarity=0.247 Sum_probs=43.0
Q ss_pred CCEEEEEcCCC--ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 79 GAKVLDVGSGS--GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 79 ~~~vLDiGcG~--G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
..+|||||||+ +..+..+++...++++|++||.|+.|++.| +++.... .++++|+++
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~----~~~~~~v~a 138 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP----EGRTAYVEA 138 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS----SSEEEEEEC
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC----CCcEEEEEe
Confidence 36899999997 445566666656788999999999999999 8776432 245776653
No 243
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.63 E-value=1.1e-07 Score=73.89 Aligned_cols=71 Identities=17% Similarity=0.211 Sum_probs=56.0
Q ss_pred CCCcccchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhC------------CCCeEEEEcCCHHHHHHH-hc
Q psy7827 55 YGSIIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVG------------KNGSVVGVEHIPEIVNHA-SN 121 (140)
Q Consensus 55 ~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~------------~~~~v~gvD~s~~~i~~a-~~ 121 (140)
.|+......+.+.+++.+. +.++.+|||.|||+|.++..+++... ...+++|+|+++.+++.| .+
T Consensus 150 ~G~fyTP~~v~~~mv~~l~--~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~n 227 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCIN--PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMN 227 (445)
T ss_dssp CGGGCCCHHHHHHHHHHHC--CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHhC--CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHH
Confidence 3444555677788888876 66788999999999999999887641 124599999999999999 88
Q ss_pred hhhcCC
Q psy7827 122 VTTLHY 127 (140)
Q Consensus 122 ~~~~~~ 127 (140)
+...++
T Consensus 228 l~l~g~ 233 (445)
T 2okc_A 228 LYLHGI 233 (445)
T ss_dssp HHHTTC
T ss_pred HHHhCC
Confidence 876665
No 244
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.62 E-value=2.3e-08 Score=76.60 Aligned_cols=62 Identities=23% Similarity=0.318 Sum_probs=48.7
Q ss_pred CCcccchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 56 GSIIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 56 ~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
|+....+.+.+.+++.+. ..++.+|||+|||+|.++..+++..+...+++|+|+++.+++.|
T Consensus 19 g~~~TP~~l~~~~~~~~~--~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a 80 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAE--APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP 80 (421)
T ss_dssp --CCCCHHHHHHHHHHCC--CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC
T ss_pred ceEeCCHHHHHHHHHhhc--cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC
Confidence 334445667777777775 45677999999999999999998864456899999999998776
No 245
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.62 E-value=6.1e-08 Score=74.41 Aligned_cols=60 Identities=15% Similarity=0.021 Sum_probs=50.1
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCc-EEEeec
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKR-IKFICE 139 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~-i~~~~g 139 (140)
.++.+|||++||+|.+++.++.......+|+++|+++.+++.+ +|++.++++ ++ ++++++
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~---~~~v~v~~~ 112 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP---EDRYEIHGM 112 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC---GGGEEEECS
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC---CceEEEEeC
Confidence 4678999999999999999998742124799999999999999 999999873 44 777654
No 246
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.62 E-value=1.9e-07 Score=76.53 Aligned_cols=74 Identities=20% Similarity=0.222 Sum_probs=58.3
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhC---------------------------------------
Q psy7827 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVG--------------------------------------- 101 (140)
Q Consensus 61 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~--------------------------------------- 101 (140)
.+.+.+.++.... ..++..+||.+||+|.+++.++....
T Consensus 175 ~e~LAa~ll~~~~--~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 175 KETLAAAIVMRSG--WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp CHHHHHHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhC--CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 3556666666665 67788999999999999998877531
Q ss_pred --CCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 102 --KNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 102 --~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+..+++|+|+++.+++.| .|+..+++. +.|+|.++
T Consensus 253 ~~~~~~i~G~Did~~av~~A~~N~~~agv~---~~i~~~~~ 290 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRARTNARLAGIG---ELITFEVK 290 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHHHHHHHTTCG---GGEEEEEC
T ss_pred ccCCccEEEEECCHHHHHHHHHHHHHcCCC---CceEEEEC
Confidence 124799999999999999 999999983 45777654
No 247
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.61 E-value=4e-08 Score=71.49 Aligned_cols=68 Identities=18% Similarity=0.174 Sum_probs=48.1
Q ss_pred HHHHHHhcccCCC--CEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcC--C--CC-CCCcEEEee
Q psy7827 67 EVLELLKDKLVPG--AKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLH--Y--PK-LNKRIKFIC 138 (140)
Q Consensus 67 ~~~~~l~~~~~~~--~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~--~--~~-~~~~i~~~~ 138 (140)
.+.+.+. +.++ .+|||+|||+|..++.++.... +|++||+++.+.+.+ +++.... . +. +..+|++++
T Consensus 77 ~l~~al~--l~~g~~~~VLDl~~G~G~dal~lA~~g~---~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~ 151 (258)
T 2oyr_A 77 AVAKAVG--IKGDYLPDVVDATAGLGRDAFVLASVGC---RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIH 151 (258)
T ss_dssp HHHHHTT--CBTTBCCCEEETTCTTCHHHHHHHHHTC---CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEE
T ss_pred HHHHHhc--ccCCCCCEEEEcCCcCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEE
Confidence 3444444 5566 8999999999999999999854 499999999987777 6554321 1 10 124677776
Q ss_pred c
Q psy7827 139 E 139 (140)
Q Consensus 139 g 139 (140)
+
T Consensus 152 ~ 152 (258)
T 2oyr_A 152 A 152 (258)
T ss_dssp S
T ss_pred C
Confidence 4
No 248
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.61 E-value=9.8e-08 Score=72.95 Aligned_cols=47 Identities=21% Similarity=0.027 Sum_probs=42.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
++.+|||+|||+|.+++.++...+ ..+|+++|+++.+++.+ +|+..+
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n 94 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLN 94 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHh
Confidence 678999999999999999999853 45799999999999999 999888
No 249
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.61 E-value=3.6e-08 Score=68.10 Aligned_cols=39 Identities=15% Similarity=0.285 Sum_probs=34.1
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCC-CCeEEEEcCCHH
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGK-NGSVVGVEHIPE 114 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~~~v~gvD~s~~ 114 (140)
+.++.+|||+|||+|.++..+++..++ .++|+|+|+|+.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~ 59 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM 59 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc
Confidence 467889999999999999999998743 578999999983
No 250
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.60 E-value=2.2e-08 Score=71.86 Aligned_cols=47 Identities=15% Similarity=0.096 Sum_probs=40.0
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
.++.+|||+|||+|.++..++.... .+|+|+|+|+.|++.| +++...
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~ 102 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKE 102 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcC
Confidence 5678999999999999999887643 4699999999999999 877554
No 251
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.59 E-value=6.4e-08 Score=66.53 Aligned_cols=40 Identities=33% Similarity=0.535 Sum_probs=34.6
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCC--------CeEEEEcCCHHH
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKN--------GSVVGVEHIPEI 115 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~--------~~v~gvD~s~~~ 115 (140)
+.++.+|||+|||+|.++..+++..+.. ++|+|+|+|+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~ 67 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF 67 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc
Confidence 5678999999999999999999996432 789999999853
No 252
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.55 E-value=3e-07 Score=67.94 Aligned_cols=58 Identities=21% Similarity=0.224 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 63 VQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 63 ~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
.+...+++.. ..+++.|||++||+|..+..+++... +++|+|+++.+++.| +++....
T Consensus 223 ~l~~~~i~~~---~~~~~~vlD~f~GsGt~~~~a~~~g~---~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 223 ELAERLVRMF---SFVGDVVLDPFAGTGTTLIAAARWGR---RALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp HHHHHHHHHH---CCTTCEEEETTCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHh---CCCCCEEEECCCCCCHHHHHHHHcCC---eEEEEeCCHHHHHHHHHHHHHhc
Confidence 4455555554 36789999999999999999888753 599999999999999 8887653
No 253
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.52 E-value=1e-07 Score=63.80 Aligned_cols=41 Identities=22% Similarity=0.557 Sum_probs=35.6
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHH
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVN 117 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~ 117 (140)
+.++.+|||+|||+|.++..+++..++..+++|+|+++ +++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~ 60 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP 60 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc
Confidence 46788999999999999999999875567899999999 653
No 254
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.52 E-value=1.3e-07 Score=65.60 Aligned_cols=36 Identities=17% Similarity=0.375 Sum_probs=32.0
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHH
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPE 114 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~ 114 (140)
++++.+|||+|||+|.++..+++. .++|+|||+++.
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~ 58 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEM 58 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEecccc
Confidence 468899999999999999999887 457999999974
No 255
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.51 E-value=3.2e-07 Score=67.27 Aligned_cols=45 Identities=18% Similarity=0.272 Sum_probs=36.7
Q ss_pred CCCEEEEEcCCCCh----HHHHHHHHhCC---CCeEEEEcCCHHHHHHH-hch
Q psy7827 78 PGAKVLDVGSGSGY----LTTCFAHMVGK---NGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 78 ~~~~vLDiGcG~G~----~~~~la~~~~~---~~~v~gvD~s~~~i~~a-~~~ 122 (140)
++.+|||+|||+|. +++.+++..+. +.+|+|+|+|+.|++.| +++
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGI 157 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTE
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcC
Confidence 45699999999998 66677776542 35899999999999999 764
No 256
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.50 E-value=1.5e-07 Score=68.58 Aligned_cols=57 Identities=16% Similarity=-0.038 Sum_probs=44.8
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc--CCCCCCCcEEEee
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL--HYPKLNKRIKFIC 138 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~--~~~~~~~~i~~~~ 138 (140)
..+.+|||||||+|.++..+++. + .+++++|+++.+++.| +++... +.. ..+++++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~--~~rv~~~~ 130 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKN--NKNFTHAK 130 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHT--CTTEEEES
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccC--CCeEEEEe
Confidence 45689999999999999998877 3 6899999999999999 877542 111 24666654
No 257
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.49 E-value=1.3e-07 Score=66.08 Aligned_cols=43 Identities=33% Similarity=0.507 Sum_probs=38.3
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
.++.+|||+|||+|.++..+++. + .+++|+|+|+.+++.+ ++.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~~~~~~~~~~~ 74 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFPEAAEQAKEKL 74 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSHHHHHHHHTTS
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhC
Confidence 47789999999999999999887 2 5799999999999999 764
No 258
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.46 E-value=4.6e-07 Score=72.18 Aligned_cols=72 Identities=19% Similarity=0.204 Sum_probs=55.6
Q ss_pred CCCcccchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCC-----------------CCeEEEEcCCHHHHH
Q psy7827 55 YGSIIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGK-----------------NGSVVGVEHIPEIVN 117 (140)
Q Consensus 55 ~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-----------------~~~v~gvD~s~~~i~ 117 (140)
.|+......+...+++.+. +.++.+|||.+||+|.++..+++.... ..+++|+|+++.+++
T Consensus 148 ~G~fyTP~~iv~~mv~~l~--p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~ 225 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLLK--PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRR 225 (541)
T ss_dssp --CCCCCHHHHHHHHHHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHH
T ss_pred CCeeeCCHHHHHHHHHHhc--cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHH
Confidence 3555556667777888886 667889999999999999998876421 126999999999999
Q ss_pred HH-hchhhcCCC
Q psy7827 118 HA-SNVTTLHYP 128 (140)
Q Consensus 118 ~a-~~~~~~~~~ 128 (140)
.| .++...+..
T Consensus 226 lA~~nl~l~gi~ 237 (541)
T 2ar0_A 226 LALMNCLLHDIE 237 (541)
T ss_dssp HHHHHHHTTTCC
T ss_pred HHHHHHHHhCCC
Confidence 99 887766653
No 259
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.43 E-value=8.8e-07 Score=62.18 Aligned_cols=59 Identities=15% Similarity=0.107 Sum_probs=47.7
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+.+.++|||+|| |+.|+++++.. +++|++||.+++..+.| +++.+.++. -.++|++++|
T Consensus 28 l~~a~~VLEiGt--GySTl~lA~~~--~g~VvtvE~d~~~~~~ar~~l~~~g~~-~~~~I~~~~g 87 (202)
T 3cvo_A 28 YEEAEVILEYGS--GGSTVVAAELP--GKHVTSVESDRAWARMMKAWLAANPPA-EGTEVNIVWT 87 (202)
T ss_dssp HHHCSEEEEESC--SHHHHHHHTST--TCEEEEEESCHHHHHHHHHHHHHSCCC-TTCEEEEEEC
T ss_pred hhCCCEEEEECc--hHHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHHHHcCCC-CCCceEEEEe
Confidence 446789999998 58899988852 67899999999999999 999998861 0257888775
No 260
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.42 E-value=4.9e-07 Score=67.91 Aligned_cols=69 Identities=19% Similarity=0.327 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHHhchhhcCCCCCCCcEEEeec
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHASNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~~~i~~~~g 139 (140)
|.+.+.+++.|. +++++.++|..||.|..|..+++.+++.++|+|+|.++.+++.|+++. .++++++++
T Consensus 43 pVLl~Evl~~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~-------~~Rv~lv~~ 111 (347)
T 3tka_A 43 TVLLDEAVNGLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTID-------DPRFSIIHG 111 (347)
T ss_dssp CTTTHHHHHHTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCC-------CTTEEEEES
T ss_pred cccHHHHHHhhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhc-------CCcEEEEeC
Confidence 345677788887 889999999999999999999999878899999999999999883331 347887764
No 261
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.38 E-value=5.6e-07 Score=67.60 Aligned_cols=58 Identities=19% Similarity=0.169 Sum_probs=41.5
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHHhchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHASNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~~~i~~~~g 139 (140)
+.++.+|||||||+|.++..+++.+ +..+++++|++ .++. .+++...+. .++|+++.+
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~-~~~~~~~~~---~~~v~~~~~ 239 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDRA-EVVA-RHRLDAPDV---AGRWKVVEG 239 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEECH-HHHT-TCCCCCGGG---TTSEEEEEC
T ss_pred ccCCceEEEECCccCHHHHHHHHHC-CCCEEEEecCH-HHhh-cccccccCC---CCCeEEEec
Confidence 5678899999999999999999986 56789999994 4444 322222222 356777654
No 262
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.33 E-value=8.3e-07 Score=62.20 Aligned_cols=37 Identities=22% Similarity=0.434 Sum_probs=32.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SN 121 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~ 121 (140)
++.+|||+|||+|.++..++.. +|+|+|+.+++.+ ++
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~ 84 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR 84 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc
Confidence 4889999999999998877532 9999999999999 64
No 263
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.30 E-value=1.8e-06 Score=65.17 Aligned_cols=58 Identities=21% Similarity=0.261 Sum_probs=46.4
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
+....+|+|||||+|.++..+++.. +..+++..|. |.+++.| +++...+ .+||+++.|
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~----~~rv~~~~g 235 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQE----EEQIDFQEG 235 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC------CCSEEEEES
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhcc----cCceeeecC
Confidence 4566799999999999999999997 6778888887 8899999 7765443 357888764
No 264
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.30 E-value=1.6e-06 Score=65.83 Aligned_cols=60 Identities=18% Similarity=0.185 Sum_probs=45.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCC----CCcEEEeec
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKL----NKRIKFICE 139 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~----~~~i~~~~g 139 (140)
++.+||+||||+|.++..+++.. . .+|++||+++.+++.| +++...+-..+ ..+++++.+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~-~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~ 252 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK-P-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIE 252 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC-C-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEES
T ss_pred CCCEEEEEECChhHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEEC
Confidence 57899999999999999988874 3 6899999999999999 88765431111 136877754
No 265
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.29 E-value=4.2e-07 Score=66.28 Aligned_cols=39 Identities=21% Similarity=0.222 Sum_probs=32.9
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++.+|||+|||+|.++..+++. ++|+|||+++ |+..+
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a 110 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGG 110 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhh
Confidence 567899999999999999999887 3599999999 64333
No 266
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.28 E-value=1.1e-06 Score=58.52 Aligned_cols=52 Identities=17% Similarity=0.248 Sum_probs=40.9
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCCC-hHHHHHHHHhCCCCeEEEEcCCHHHHH
Q psy7827 64 QHAEVLELLKDKLVPGAKVLDVGSGSG-YLTTCFAHMVGKNGSVVGVEHIPEIVN 117 (140)
Q Consensus 64 ~~~~~~~~l~~~~~~~~~vLDiGcG~G-~~~~~la~~~~~~~~v~gvD~s~~~i~ 117 (140)
+...+.+.+.....++.+|||||||+| ..+..|++.. +..|+++|+++..++
T Consensus 21 m~e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 21 MWNDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG 73 (153)
T ss_dssp HHHHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT
T ss_pred HHHHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc
Confidence 455666776655667789999999999 5999999853 346999999988766
No 267
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.27 E-value=3.8e-07 Score=66.88 Aligned_cols=39 Identities=21% Similarity=0.235 Sum_probs=33.1
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++.+|||+|||+|.++..+++. + +|+|||+++ |+..+
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~-~---~V~gVD~s~-m~~~a 118 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ-P---NVREVKAYT-LGTSG 118 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS-T---TEEEEEEEC-CCCTT
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc-C---CEEEEECch-hhhhh
Confidence 567889999999999999999987 3 599999999 65444
No 268
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.26 E-value=1.4e-06 Score=66.12 Aligned_cols=42 Identities=17% Similarity=0.374 Sum_probs=37.1
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
+.+..+|||||||+|.++..+++.+ +..+++++|+ +.+++.|
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a 242 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDA 242 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTC
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhh
Confidence 3456899999999999999999997 6678999999 8898887
No 269
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.25 E-value=3.7e-06 Score=67.06 Aligned_cols=73 Identities=16% Similarity=0.023 Sum_probs=57.6
Q ss_pred CCCcccchHHHHHHHHHHhcc--cCCCCEEEEEcCCCChHHHHHHHHhC--CCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 55 YGSIIDNPVQHAEVLELLKDK--LVPGAKVLDVGSGSGYLTTCFAHMVG--KNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 55 ~~~~~~~~~~~~~~~~~l~~~--~~~~~~vLDiGcG~G~~~~~la~~~~--~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
.|+..+.+.+...+++.+... ..++.+|+|.+||+|.+...+++... ...+++|+|+++.++..| .|+...++
T Consensus 196 ~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi 273 (542)
T 3lkd_A 196 AGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGV 273 (542)
T ss_dssp CSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred CCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCC
Confidence 455556677788888887622 23678999999999999999888753 245799999999999999 88877776
No 270
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.24 E-value=1.1e-06 Score=69.97 Aligned_cols=70 Identities=24% Similarity=0.226 Sum_probs=54.6
Q ss_pred CCCcccchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCC--------------CCeEEEEcCCHHHHHHH-
Q psy7827 55 YGSIIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGK--------------NGSVVGVEHIPEIVNHA- 119 (140)
Q Consensus 55 ~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~--------------~~~v~gvD~s~~~i~~a- 119 (140)
.|+..+.+.+...+++.+. +.++ +|||.+||+|.+...+++.... ..+++|+|+++.++..|
T Consensus 224 ~G~fyTP~~Vv~lmv~ll~--p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~ 300 (544)
T 3khk_A 224 GGQYYTPKSIVTLIVEMLE--PYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAA 300 (544)
T ss_dssp STTTCCCHHHHHHHHHHHC--CCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHH
T ss_pred CCeEeCCHHHHHHHHHHHh--cCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHH
Confidence 4566667778888888886 4444 9999999999998887654310 34699999999999999
Q ss_pred hchhhcCC
Q psy7827 120 SNVTTLHY 127 (140)
Q Consensus 120 ~~~~~~~~ 127 (140)
.|+...++
T Consensus 301 ~Nl~l~gi 308 (544)
T 3khk_A 301 MNMVIRGI 308 (544)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhCC
Confidence 88876665
No 271
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.24 E-value=1.2e-06 Score=67.34 Aligned_cols=50 Identities=14% Similarity=0.133 Sum_probs=38.2
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCC------CChHHHHHHHHhCCCCeEEEEcCCHHHH
Q psy7827 64 QHAEVLELLKDKLVPGAKVLDVGSG------SGYLTTCFAHMVGKNGSVVGVEHIPEIV 116 (140)
Q Consensus 64 ~~~~~~~~l~~~~~~~~~vLDiGcG------~G~~~~~la~~~~~~~~v~gvD~s~~~i 116 (140)
.+..++..+ ..++.+||||||| +|..++.+++...++++|+|||+|+.|.
T Consensus 205 ~Ye~lL~~l---~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~ 260 (419)
T 3sso_A 205 HYDRHFRDY---RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH 260 (419)
T ss_dssp HHHHHHGGG---TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG
T ss_pred HHHHHHHhh---cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh
Confidence 444444433 3567899999999 7888888887765678999999999983
No 272
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.24 E-value=3e-06 Score=61.39 Aligned_cols=59 Identities=22% Similarity=0.207 Sum_probs=46.2
Q ss_pred HHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 63 VQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 63 ~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
.+...+++.. ..+++.|||..||+|..+....+... +++|+|+++.+++.| +++..+++
T Consensus 200 ~l~~~~i~~~---~~~~~~vlD~f~GsGtt~~~a~~~gr---~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 200 DLIERIIRAS---SNPNDLVLDCFMGSGTTAIVAKKLGR---NFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp HHHHHHHHHH---CCTTCEEEESSCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHh---CCCCCEEEECCCCCCHHHHHHHHcCC---eEEEEeCCHHHHHHHHHHHHhccC
Confidence 3455555554 46889999999999999999887743 599999999999999 99877654
No 273
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.19 E-value=2.4e-06 Score=64.72 Aligned_cols=42 Identities=21% Similarity=0.305 Sum_probs=37.2
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
..+..+|||||||+|..+..+++.+ +..+++++|+ +.+++.|
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a 240 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEA 240 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTC
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhh
Confidence 3467899999999999999999987 6678999999 8888877
No 274
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.17 E-value=1.5e-06 Score=65.25 Aligned_cols=43 Identities=16% Similarity=0.326 Sum_probs=38.2
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-h
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-S 120 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~ 120 (140)
+.++.+|||||||+|.++..+++.. +..+++++|+ +.+++.| +
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~ 229 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSG 229 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhccc
Confidence 4567899999999999999999986 5678999999 9999888 5
No 275
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.15 E-value=3.2e-06 Score=64.00 Aligned_cols=42 Identities=19% Similarity=0.257 Sum_probs=37.3
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
+.++.+|||||||+|.++..+++.+ +..+++++|+ +.+++.|
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a 248 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENA 248 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTC
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhh
Confidence 4567899999999999999999996 5678999999 9999888
No 276
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=98.14 E-value=1.6e-05 Score=60.20 Aligned_cols=66 Identities=21% Similarity=0.241 Sum_probs=52.8
Q ss_pred CCCCc-ccchHHHHHHHHHHhcccC------CCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 54 GYGSI-IDNPVQHAEVLELLKDKLV------PGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 54 ~~~~~-~~~~~~~~~~~~~l~~~~~------~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
.+|++ +..+.+.+.+++.+. +. ++..|||||+|.|.+|..|++... ..++++||+++.++... +.+
T Consensus 29 ~lGQnFL~d~~i~~~Iv~~~~--l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~ 102 (353)
T 1i4w_A 29 FYGFKYLWNPTVYNKIFDKLD--LTKTYKHPEELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF 102 (353)
T ss_dssp GGGCCCBCCHHHHHHHHHHHC--GGGTCCCTTTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT
T ss_pred CCCcCccCCHHHHHHHHHhcc--CCcccCcCCCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc
Confidence 34443 346888999999987 54 358999999999999999998752 24699999999999888 655
No 277
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.14 E-value=6.8e-07 Score=66.40 Aligned_cols=37 Identities=27% Similarity=0.371 Sum_probs=31.2
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcC----CHHHH
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEH----IPEIV 116 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~----s~~~i 116 (140)
++++.+|||+|||+|.++..+++. + +|+|||+ ++.++
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~-~---~V~gvD~~~~~~~~~~ 120 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL-K---NVREVKGLTKGGPGHE 120 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS-T---TEEEEEEECCCSTTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc-C---CEEEEeccccCchhHH
Confidence 567889999999999999999987 3 4999999 56544
No 278
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.13 E-value=5.5e-06 Score=67.06 Aligned_cols=57 Identities=14% Similarity=0.192 Sum_probs=43.2
Q ss_pred CCEEEEEcCCCChHHHHHHHHh---CCCCeEEEEcCCHHHHHHH-hchhhcCCCCCCCcEEEeec
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMV---GKNGSVVGVEHIPEIVNHA-SNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~---~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~~~~i~~~~g 139 (140)
...|||+|||+|-++...+++. +...+|++||.|+ +...| +....++. .++|++++|
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~---~dkVtVI~g 418 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEW---GSQVTVVSS 418 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTT---GGGEEEEES
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccC---CCeEEEEeC
Confidence 3579999999999955544443 3334699999997 66678 88888877 578999886
No 279
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.96 E-value=6.2e-06 Score=62.08 Aligned_cols=42 Identities=19% Similarity=0.342 Sum_probs=36.6
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
+.+..+|||||||+|.++..+++.+ +..+++++|+ +.+++.|
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a 232 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNL 232 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSC
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhc
Confidence 3466899999999999999999996 5678999999 7888877
No 280
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.93 E-value=1.3e-05 Score=65.36 Aligned_cols=58 Identities=16% Similarity=0.195 Sum_probs=40.6
Q ss_pred CCEEEEEcCCCChHHHHHHHHh---C---------CCCeEEEEcCCHHHHHHHhchhhcCCCCCCCcEEEeec
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMV---G---------KNGSVVGVEHIPEIVNHASNVTTLHYPKLNKRIKFICE 139 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~---~---------~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~~~i~~~~g 139 (140)
+..|||+|||+|.++...+++. + ...+|+|||.++.++...++...++. .++|++++|
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~---~d~VtVI~g 479 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTW---KRRVTIIES 479 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTT---TTCSEEEES
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCC---CCeEEEEeC
Confidence 4589999999999975443332 2 23479999999977765533334555 567888876
No 281
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.92 E-value=7.9e-06 Score=56.79 Aligned_cols=41 Identities=17% Similarity=0.178 Sum_probs=31.8
Q ss_pred HHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHH
Q psy7827 67 EVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPE 114 (140)
Q Consensus 67 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~ 114 (140)
.+++.+.. ..++.+|||+|||+|.++..++ .+++|+|+|+.
T Consensus 57 ~~~~~l~~-~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~ 97 (215)
T 2zfu_A 57 RIARDLRQ-RPASLVVADFGCGDCRLASSIR------NPVHCFDLASL 97 (215)
T ss_dssp HHHHHHHT-SCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS
T ss_pred HHHHHHhc-cCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC
Confidence 44555541 3567899999999999988773 35999999998
No 282
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.92 E-value=1.8e-05 Score=65.55 Aligned_cols=65 Identities=12% Similarity=0.057 Sum_probs=48.5
Q ss_pred CCCcccchHHHHHHHHH----HhcccCCCCEEEEEcCCCChHHHHHHHHhC--CCCeEEEEcCCHHHHHHH
Q psy7827 55 YGSIIDNPVQHAEVLEL----LKDKLVPGAKVLDVGSGSGYLTTCFAHMVG--KNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 55 ~~~~~~~~~~~~~~~~~----l~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~~~v~gvD~s~~~i~~a 119 (140)
.|.....+.+...++.. +.....++.+|||.|||+|.++..+++..+ ...+++|+|+++.+++.|
T Consensus 294 ~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LA 364 (878)
T 3s1s_A 294 EGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELL 364 (878)
T ss_dssp CBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHH
T ss_pred CceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHH
Confidence 34444556667777666 221234578999999999999999998763 135799999999999888
No 283
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.90 E-value=5.3e-05 Score=58.34 Aligned_cols=49 Identities=16% Similarity=0.096 Sum_probs=42.7
Q ss_pred cCCCCEEEEEcCCCChHHHHHH-HHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFA-HMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la-~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
++++..++|+|++.|..+..++ +..++.++|+++|++|...+.. +++..
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 4688999999999999999988 5554447899999999999999 88877
No 284
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.89 E-value=4.8e-05 Score=60.48 Aligned_cols=72 Identities=17% Similarity=0.101 Sum_probs=57.5
Q ss_pred CCCcccchHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCC------------CCeEEEEcCCHHHHHHH-hc
Q psy7827 55 YGSIIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGK------------NGSVVGVEHIPEIVNHA-SN 121 (140)
Q Consensus 55 ~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~------------~~~v~gvD~s~~~i~~a-~~ 121 (140)
.|+..+...+++.+++.+. +.++.+|+|-+||+|.+.....+.... ...++|+|+++.+...| .|
T Consensus 196 ~GqfyTP~~Vv~lmv~l~~--p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mN 273 (530)
T 3ufb_A 196 SGEFYTPRPVVRFMVEVMD--PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMN 273 (530)
T ss_dssp CCCCCCCHHHHHHHHHHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHH
T ss_pred CceECCcHHHHHHHHHhhc--cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHH
Confidence 4566667788888999887 778889999999999999887665421 23599999999999999 88
Q ss_pred hhhcCCC
Q psy7827 122 VTTLHYP 128 (140)
Q Consensus 122 ~~~~~~~ 128 (140)
+--++..
T Consensus 274 l~lhg~~ 280 (530)
T 3ufb_A 274 LLLHGLE 280 (530)
T ss_dssp HHHHTCS
T ss_pred HHhcCCc
Confidence 7666653
No 285
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.81 E-value=6.8e-05 Score=56.89 Aligned_cols=66 Identities=15% Similarity=0.194 Sum_probs=52.6
Q ss_pred HHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCC--CCcEEEe
Q psy7827 69 LELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKL--NKRIKFI 137 (140)
Q Consensus 69 ~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~--~~~i~~~ 137 (140)
...+. +++|++|||+++|.|.-|..++... ..+.|+++|+++..++.. +++...+...+ ..++.+.
T Consensus 141 ~~~L~--~~pg~~VLD~CAaPGGKT~~la~~~-~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~ 209 (359)
T 4fzv_A 141 VLALG--LQPGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVT 209 (359)
T ss_dssp HHHHC--CCTTEEEEESSCTTCHHHHHHHHTT-CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEE
T ss_pred HHHhC--CCCCCEEEEecCCccHHHHHHHHhc-CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEE
Confidence 34455 7899999999999999999999875 557899999999999999 99988776432 2345543
No 286
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.74 E-value=3.3e-05 Score=57.01 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=29.8
Q ss_pred cCCCCEEEEEcCCC------ChHHHHHHHHhCCCCeEEEEcCCHH
Q psy7827 76 LVPGAKVLDVGSGS------GYLTTCFAHMVGKNGSVVGVEHIPE 114 (140)
Q Consensus 76 ~~~~~~vLDiGcG~------G~~~~~la~~~~~~~~v~gvD~s~~ 114 (140)
++++.+|||+|||+ |. ..+++..++.++|+|+|+|+.
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~ 103 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF 103 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC
Confidence 67889999999955 55 556667655689999999997
No 287
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.71 E-value=0.0002 Score=52.64 Aligned_cols=62 Identities=8% Similarity=0.162 Sum_probs=48.2
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhC----CCCeEEEEcCCH--------------------------HHHHHH-hchhhc
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVG----KNGSVVGVEHIP--------------------------EIVNHA-SNVTTL 125 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~----~~~~v~gvD~s~--------------------------~~i~~a-~~~~~~ 125 (140)
...+.|||+||..|+.++.++.... ++++|+++|..+ ..++.+ +++.+.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 4567999999999999999987653 367899999642 146778 888888
Q ss_pred CCCCCCCcEEEeecC
Q psy7827 126 HYPKLNKRIKFICEY 140 (140)
Q Consensus 126 ~~~~~~~~i~~~~g~ 140 (140)
++. .++|+++.|.
T Consensus 185 gl~--~~~I~li~Gd 197 (282)
T 2wk1_A 185 DLL--DEQVRFLPGW 197 (282)
T ss_dssp TCC--STTEEEEESC
T ss_pred CCC--cCceEEEEeC
Confidence 873 3689998873
No 288
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.45 E-value=0.00039 Score=51.78 Aligned_cols=59 Identities=17% Similarity=0.110 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 63 VQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 63 ~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
.+...++... ..+++.|||..||+|..+.+..+... +.+|+|+++..++.+ +++...+.
T Consensus 240 ~l~~~~i~~~---~~~~~~VlDpF~GsGtt~~aa~~~gr---~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 240 KLPEFFIRML---TEPDDLVVDIFGGSNTTGLVAERESR---KWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp HHHHHHHHHH---CCTTCEEEETTCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHGGGSCSCS
T ss_pred HHHHHHHHHh---CCCCCEEEECCCCCCHHHHHHHHcCC---CEEEEeCCHHHHHHHHHHHHhccc
Confidence 4555555544 47899999999999999988777643 599999999999999 99876654
No 289
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.31 E-value=0.00064 Score=50.65 Aligned_cols=59 Identities=19% Similarity=0.205 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCH---HHHHHH-hchhhcC
Q psy7827 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIP---EIVNHA-SNVTTLH 126 (140)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~---~~i~~a-~~~~~~~ 126 (140)
..+...++... ..+++.|||--||+|..+.+..+... +.+|+|+++ ..++.+ +++...+
T Consensus 229 ~~l~~~~i~~~---~~~~~~vlDpF~GsGtt~~aa~~~~r---~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 229 AAVIERLVRAL---SHPGSTVLDFFAGSGVTARVAIQEGR---NSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHH---SCTTCEEEETTCTTCHHHHHHHHHTC---EEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHh---CCCCCEEEecCCCCCHHHHHHHHcCC---cEEEEECCccHHHHHHHHHHHHHHcc
Confidence 34555555554 47899999999999999998888753 599999999 999999 9887765
No 290
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.30 E-value=0.00031 Score=50.84 Aligned_cols=40 Identities=18% Similarity=0.184 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh------CCC-----CeEEEEcCCH---HHHH
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV------GKN-----GSVVGVEHIP---EIVN 117 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~------~~~-----~~v~gvD~s~---~~i~ 117 (140)
++.+|||+|||+|+.++.+++.. .++ .+++++|..| +.+.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~ 113 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLA 113 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHH
Confidence 45699999999999999987764 443 4899999876 5544
No 291
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.27 E-value=0.00024 Score=54.06 Aligned_cols=35 Identities=26% Similarity=0.243 Sum_probs=30.9
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCH
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIP 113 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~ 113 (140)
+++|+++||+||++|..|..+++.. ++|+|||+.+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg---~~V~aVD~~~ 243 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRN---MWVYSVDNGP 243 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTT---CEEEEECSSC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCC---CEEEEEEhhh
Confidence 6789999999999999999998874 4699999764
No 292
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.11 E-value=0.00054 Score=50.12 Aligned_cols=41 Identities=20% Similarity=0.163 Sum_probs=32.9
Q ss_pred ccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHH
Q psy7827 75 KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIV 116 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i 116 (140)
.+.++.+|||+|||+|.++.++++.. ....++|+|+...+.
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~ 127 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGH 127 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTS
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCcc
Confidence 36788899999999999999988754 234589999987643
No 293
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.00 E-value=0.00094 Score=48.75 Aligned_cols=39 Identities=21% Similarity=0.178 Sum_probs=30.6
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHH
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEI 115 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~ 115 (140)
++++.+|||+|||+|.++..+++.. .-..++|+|+.-++
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvDl 110 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRDG 110 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTT
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEeccC
Confidence 6788899999999999999988763 22357888887554
No 294
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=96.96 E-value=0.0039 Score=45.95 Aligned_cols=62 Identities=18% Similarity=0.192 Sum_probs=47.4
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCCCCC-CCcEEEee
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHYPKL-NKRIKFIC 138 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~~~~-~~~i~~~~ 138 (140)
.++.++||-||-|.|..+..+++.. +..+|+.||+++..++.| +.+...+.... ..|++++.
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~ 144 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVI 144 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEe
Confidence 3567899999999999999998874 345799999999999999 87765322111 45677664
No 295
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.81 E-value=0.00092 Score=47.94 Aligned_cols=40 Identities=23% Similarity=0.287 Sum_probs=32.8
Q ss_pred ccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHH
Q psy7827 75 KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEI 115 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~ 115 (140)
.++++++|+|+||++|.++.+.+...+. .+|+|+|+-..-
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~-~~V~avdvG~~g 114 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKV-TEVRGYTKGGPG 114 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTE-EEEEEECCCSTT
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCC-CEEEEEecCCCC
Confidence 3688899999999999999988887532 379999987643
No 296
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.74 E-value=0.00084 Score=49.56 Aligned_cols=39 Identities=28% Similarity=0.257 Sum_probs=32.3
Q ss_pred ccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHH
Q psy7827 75 KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPE 114 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~ 114 (140)
.++++++|||+||++|.++.+.+...+. .+|+|+|+-..
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~gv-~~V~avdvG~~ 129 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKRV-QEVRGYTKGGP 129 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTTE-EEEEEECCCST
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcCC-CEEEEEEcCCC
Confidence 3678889999999999999988877532 36999998765
No 297
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.73 E-value=0.00016 Score=52.33 Aligned_cols=36 Identities=33% Similarity=0.403 Sum_probs=28.6
Q ss_pred ccCCCCEEEEEcCCCChHHHHHHHH--hCC-CCeEEEEc
Q psy7827 75 KLVPGAKVLDVGSGSGYLTTCFAHM--VGK-NGSVVGVE 110 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~G~~~~~la~~--~~~-~~~v~gvD 110 (140)
.++++++|+|+||+.|..+.++++. ++. .+.++|+|
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D 108 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGP 108 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCST
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccc
Confidence 4688999999999999999999987 422 34566666
No 298
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.28 E-value=0.003 Score=46.57 Aligned_cols=39 Identities=31% Similarity=0.181 Sum_probs=31.5
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHH
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEI 115 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~ 115 (140)
+.++.+|||+||++|.++..+++.. .-..|+|+|+...+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~~~ 117 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGIEG 117 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTT
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEecccc
Confidence 5788999999999999999999864 22358899987543
No 299
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.94 E-value=0.012 Score=44.03 Aligned_cols=45 Identities=16% Similarity=0.107 Sum_probs=37.3
Q ss_pred CEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 80 AKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 80 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.+++|+.||.|.++..+...+..-..++++|+++.+++.. .|+..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~ 48 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH 48 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc
Confidence 4899999999999999988752112499999999999999 88754
No 300
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=95.83 E-value=0.026 Score=43.07 Aligned_cols=46 Identities=20% Similarity=0.231 Sum_probs=39.4
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++||-||-|.|..+..+++.. ..+|+.||+++..++.| +.+..
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~--~~~V~~VEIDp~VVe~ar~yfp~ 250 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRK 250 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcC--CceeEEEccCHHHHHHHHhhchh
Confidence 456899999999999999998763 36899999999999999 77654
No 301
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=95.79 E-value=0.0023 Score=42.74 Aligned_cols=31 Identities=23% Similarity=0.166 Sum_probs=26.3
Q ss_pred cCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
++++.+|||+|||. +++|+|+.|++.| +++.
T Consensus 10 ~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~ 41 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTG 41 (176)
T ss_dssp CCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcc
Confidence 67899999999986 2399999999999 7653
No 302
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.68 E-value=0.02 Score=42.72 Aligned_cols=44 Identities=16% Similarity=0.099 Sum_probs=37.1
Q ss_pred CCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
+.+++|+.||.|.++..+...+.. .++++|+++.+++.. .|+..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~--~v~~~e~d~~a~~t~~~N~~~ 55 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAE--CVYSNEWDKYAQEVYEMNFGE 55 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCE--EEEEECCCHHHHHHHHHHHSC
T ss_pred CCcEEEECCCcCHHHHHHHHCCCe--EEEEEeCCHHHHHHHHHHcCC
Confidence 468999999999999999887532 589999999999998 77643
No 303
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.42 E-value=0.029 Score=42.62 Aligned_cols=43 Identities=26% Similarity=0.152 Sum_probs=36.4
Q ss_pred CEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 80 AKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 80 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.+++|+.||.|.++..+...+.. .++++|+++.+++.. .|+..
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~--~v~avE~d~~a~~t~~~N~~~ 46 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFD--VKMAVEIDQHAINTHAINFPR 46 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCE--EEEEECSCHHHHHHHHHHCTT
T ss_pred CeEEEEccCcCHHHHHHHHCCCc--EEEEEeCCHHHHHHHHHhCCC
Confidence 48999999999999999888532 478999999999988 77653
No 304
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.41 E-value=0.083 Score=39.99 Aligned_cols=43 Identities=26% Similarity=0.420 Sum_probs=36.3
Q ss_pred cCCCCEEEEEcCCC-ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGS-GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||-+|||. |.++..+++..+ ..+|+++|.+++.++.+
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a 226 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLL 226 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHH
Confidence 78899999999976 888888888763 12799999999998888
No 305
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=93.84 E-value=0.13 Score=38.37 Aligned_cols=47 Identities=13% Similarity=0.073 Sum_probs=37.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhCCCCeE-EEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVGKNGSV-VGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v-~gvD~s~~~i~~a-~~~~~ 124 (140)
...+++|+.||.|.++..+.+.+-.--.+ .++|+++.+++.. .|+..
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~ 57 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE 57 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC
Confidence 34589999999999999998874211136 7999999999988 77754
No 306
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=93.79 E-value=0.098 Score=38.78 Aligned_cols=46 Identities=11% Similarity=0.161 Sum_probs=32.4
Q ss_pred HHHHHHHHhc---ccCCCCEEEEEcC------CCChHHHHHHHHhCCC-CeEEEEcCCH
Q psy7827 65 HAEVLELLKD---KLVPGAKVLDVGS------GSGYLTTCFAHMVGKN-GSVVGVEHIP 113 (140)
Q Consensus 65 ~~~~~~~l~~---~~~~~~~vLDiGc------G~G~~~~~la~~~~~~-~~v~gvD~s~ 113 (140)
+.++.+.+.. .++.+++|||+|+ ..|. ..+.+. .+. +.|+++|+.+
T Consensus 93 ytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~-~p~g~~VVavDL~~ 148 (344)
T 3r24_A 93 YTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQW-LPTGTLLVDSDLND 148 (344)
T ss_dssp HHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHH-SCTTCEEEEEESSC
T ss_pred HHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH--HHHHHh-CCCCcEEEEeeCcc
Confidence 5566677743 3567899999996 5666 344444 454 5999999887
No 307
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=93.60 E-value=0.05 Score=41.38 Aligned_cols=46 Identities=13% Similarity=0.016 Sum_probs=33.6
Q ss_pred CCEEEEEcCCCChHHHHHHH--------Hh------CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 79 GAKVLDVGSGSGYLTTCFAH--------MV------GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~--------~~------~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
..+|+|+|||+|..|+.+.. .+ .+..+|+.-|+-...-... +.+..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~ 113 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPP 113 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCC
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhh
Confidence 47899999999999988732 22 1456789999877776666 65543
No 308
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=93.58 E-value=0.094 Score=40.00 Aligned_cols=34 Identities=21% Similarity=0.012 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCChHHHHHHHH-------------h---CCCCeEEEEcCC
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHM-------------V---GKNGSVVGVEHI 112 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~-------------~---~~~~~v~gvD~s 112 (140)
..+|+|+||++|..|+.+... . .+..+|+..|+-
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp 102 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLF 102 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCC
Confidence 578999999999999988765 1 134578888977
No 309
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.56 E-value=0.27 Score=37.54 Aligned_cols=45 Identities=18% Similarity=0.249 Sum_probs=35.0
Q ss_pred CEEEEEcCCCChHHHHHHHHhC------CCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 80 AKVLDVGSGSGYLTTCFAHMVG------KNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 80 ~~vLDiGcG~G~~~~~la~~~~------~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
-.|+|+|.|+|.++.-+++... ...+++-||+|+.+.+.- +++..
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 4799999999999988876542 223799999999988766 65543
No 310
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=93.28 E-value=0.16 Score=37.93 Aligned_cols=45 Identities=18% Similarity=0.118 Sum_probs=36.5
Q ss_pred CEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 80 AKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 80 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.+++|+.||.|.++..+.+.+-..-.+.++|+++.+++.. .|+..
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~ 49 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE 49 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC
Confidence 3799999999999999988752112388999999999988 77754
No 311
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=93.13 E-value=0.022 Score=43.07 Aligned_cols=46 Identities=11% Similarity=-0.005 Sum_probs=35.6
Q ss_pred CCEEEEEcCCCChHHHHHHHH---------------hCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHM---------------VGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~---------------~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
..+|+|+||++|..|+.+... -.+..+|+..|+........ +++..
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~ 113 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPI 113 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTT
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcch
Confidence 467999999999888765443 12446799999999999988 88764
No 312
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=93.11 E-value=0.13 Score=39.81 Aligned_cols=46 Identities=15% Similarity=0.250 Sum_probs=36.2
Q ss_pred CCEEEEEcCCCChHHHHHHHHhCC----CCeEEEEcCCHHHHHHH-hchhh
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMVGK----NGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~~~----~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.-.|+|+|.|+|.++.-+++.... ..+++-||+|+.+.+.- +++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 469999999999999888765421 23799999999998777 66654
No 313
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=93.07 E-value=0.096 Score=38.51 Aligned_cols=42 Identities=21% Similarity=0.144 Sum_probs=34.9
Q ss_pred CEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 80 AKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 80 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
++|+|+-||.|.++..+.+.+-. -+.++|+++.+++.- .|+.
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~--~v~a~e~d~~a~~ty~~N~~ 43 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFR--IICANEYDKSIWKTYESNHS 43 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCE--EEEEEECCTTTHHHHHHHCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCE--EEEEEeCCHHHHHHHHHHCC
Confidence 47999999999999998877532 478999999999888 7654
No 314
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.04 E-value=0.26 Score=36.64 Aligned_cols=42 Identities=29% Similarity=0.372 Sum_probs=34.9
Q ss_pred cCCCCEEEEEcCCC-ChHHHHHHHHhCCCC-eEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGS-GYLTTCFAHMVGKNG-SVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~-~v~gvD~s~~~i~~a 119 (140)
++++++||-+|+|. |..+..+++.. ++ +|+++|.+++.++.+
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a 212 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAM--GAAQVVVTDLSATRLSKA 212 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHH
Confidence 78899999999874 77777888775 34 799999999988887
No 315
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=93.01 E-value=0.19 Score=36.86 Aligned_cols=46 Identities=9% Similarity=-0.022 Sum_probs=36.8
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCe-EEEEcCCHHHHHHH-hchh
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGS-VVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~-v~gvD~s~~~i~~a-~~~~ 123 (140)
....+++|+-||.|.++..+...+.. .. ++++|+++.+++.. .|..
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~-~~~v~a~E~d~~a~~ty~~N~~ 61 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQ-VDRYIASEVCEDSITVGMVRHQ 61 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBC-EEEEEEECCCHHHHHHHHHHTT
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCc-cceEEEEECCHHHHHHHHHhCC
Confidence 34568999999999999998887533 22 59999999999887 6654
No 316
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=92.98 E-value=0.024 Score=41.55 Aligned_cols=53 Identities=17% Similarity=0.099 Sum_probs=41.3
Q ss_pred HHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 67 EVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 67 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
...+.+.. -++..+||+-+|||.+++.+.... .+++.+|.++..++.. +|+..
T Consensus 82 ~yf~~l~~--~n~~~~LDlfaGSGaLgiEaLS~~---d~~vfvE~~~~a~~~L~~Nl~~ 135 (283)
T 2oo3_A 82 EYISVIKQ--INLNSTLSYYPGSPYFAINQLRSQ---DRLYLCELHPTEYNFLLKLPHF 135 (283)
T ss_dssp HHHHHHHH--HSSSSSCCEEECHHHHHHHHSCTT---SEEEEECCSHHHHHHHTTSCCT
T ss_pred HHHHHHHH--hcCCCceeEeCCcHHHHHHHcCCC---CeEEEEeCCHHHHHHHHHHhCc
Confidence 34444441 246679999999999999887743 4699999999999999 88865
No 317
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.67 E-value=0.21 Score=37.36 Aligned_cols=44 Identities=20% Similarity=0.400 Sum_probs=35.9
Q ss_pred ccCCCCEEEEEcCCC-ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGSGS-GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-+|||. |..+..+++..+. .+|+++|.+++.++.+
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~~Vi~~~~~~~~~~~a 231 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGA-SIIIAVDIVESRLELA 231 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTC-SEEEEEESCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEECCCHHHHHHH
Confidence 377899999999885 7788888887632 2599999999998888
No 318
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=92.61 E-value=0.29 Score=36.03 Aligned_cols=42 Identities=26% Similarity=0.287 Sum_probs=36.3
Q ss_pred cCCCCEEEEEcCCC-ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGS-GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||-+|+|. |..+..+++.. +++|+++|.+++.++.+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~ 206 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAKLNLA 206 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHH
Confidence 67899999999975 88888888876 34899999999999888
No 319
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.31 E-value=0.31 Score=36.71 Aligned_cols=43 Identities=28% Similarity=0.465 Sum_probs=35.3
Q ss_pred cCCCCEEEEEcCCC-ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGS-GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||-+|||. |.++..+++..+. .+|+++|.+++.++.+
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga-~~Vi~~~~~~~~~~~a 226 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGA-AVVIVGDLNPARLAHA 226 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCC-CeEEEEcCCHHHHHHH
Confidence 77899999999875 7788888887531 2699999999998888
No 320
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.20 E-value=0.37 Score=36.06 Aligned_cols=42 Identities=31% Similarity=0.332 Sum_probs=34.8
Q ss_pred cCCCCEEEEEcCCC-ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGS-GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||-+|+|. |..+..+++.. +++|+++|.+++.++.+
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a 234 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAA 234 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHH
Confidence 78899999999974 77777777775 44799999999888877
No 321
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=90.98 E-value=0.64 Score=34.38 Aligned_cols=42 Identities=26% Similarity=0.361 Sum_probs=34.4
Q ss_pred cCCCCEEEEEcCCC-ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGS-GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||-+|+|. |..+..+++.. .++|+++|.+++.++.+
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~ 208 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVA 208 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHH
Confidence 78899999999874 66777777765 34699999999988887
No 322
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=90.91 E-value=0.34 Score=35.81 Aligned_cols=42 Identities=21% Similarity=0.224 Sum_probs=35.3
Q ss_pred cCCCCEEEEEcCCC-ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGS-GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||-+|+|. |..+..+++.. +++|+++|.+++..+.+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~ 216 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDA 216 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHH
Confidence 78899999999874 77777788875 34899999999988888
No 323
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=90.56 E-value=0.46 Score=35.14 Aligned_cols=42 Identities=19% Similarity=0.279 Sum_probs=34.1
Q ss_pred cCCCCEEEEEcCCC-ChHHHHHHHHhCCCC-eEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGS-GYLTTCFAHMVGKNG-SVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~-~v~gvD~s~~~i~~a 119 (140)
++++++||-+|+|. |.++..+++.. .+ +|+++|.+++.++.+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~ 207 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHL--GAGRIFAVGSRKHCCDIA 207 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTT--TCSSEEEECCCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCcEEEEECCCHHHHHHH
Confidence 78899999999874 66777777764 33 699999999988887
No 324
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.53 E-value=0.77 Score=33.80 Aligned_cols=43 Identities=21% Similarity=0.234 Sum_probs=34.2
Q ss_pred cCCCCEEEEEcCCC-ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGS-GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
+ ++++||-+|+|. |..+..+++...++++|+++|.+++.++.+
T Consensus 169 ~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~ 212 (344)
T 2h6e_A 169 F-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFA 212 (344)
T ss_dssp C-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH
Confidence 6 899999999963 667777777761134799999999988887
No 325
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=89.87 E-value=0.33 Score=38.07 Aligned_cols=42 Identities=21% Similarity=0.261 Sum_probs=34.8
Q ss_pred CCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
.-+++|+.||.|.++..+.+.+.. .++++|+++.+.+.- .|+
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~--~v~avE~d~~A~~ty~~N~ 130 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQ--CVFTSEWNKHAVRTYKANH 130 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEE--EEEEECCCHHHHHHHHHHS
T ss_pred cceEEEecCCccHHHHHHHHCCCE--EEEEEeCCHHHHHHHHHhc
Confidence 358999999999999998776422 489999999998888 776
No 326
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=89.57 E-value=0.8 Score=33.95 Aligned_cols=44 Identities=25% Similarity=0.275 Sum_probs=35.6
Q ss_pred cCCCCEEEEEcCCC-ChHHHHHHHHhCCCCe-EEEEcCCHHHHHHH-hc
Q psy7827 76 LVPGAKVLDVGSGS-GYLTTCFAHMVGKNGS-VVGVEHIPEIVNHA-SN 121 (140)
Q Consensus 76 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~-v~gvD~s~~~i~~a-~~ 121 (140)
++++++||-+|+|. |.++..+++..+ ++ |+++|.+++.++.+ +.
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAG--ACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTT--CCSEEEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHh
Confidence 78899999999864 777777887753 34 99999999999888 53
No 327
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=89.55 E-value=0.72 Score=33.94 Aligned_cols=43 Identities=23% Similarity=0.353 Sum_probs=35.8
Q ss_pred cCCCCEEEEEcCCC-ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGS-GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||-+|+|. |..+..+++..+ ..+|+++|.+++.++.+
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~ 212 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALA 212 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHH
Confidence 78899999999874 777788887762 35799999999999888
No 328
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=89.55 E-value=0.98 Score=33.72 Aligned_cols=43 Identities=26% Similarity=0.342 Sum_probs=34.6
Q ss_pred cCCCCEEEEEcCCC-ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGS-GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||-+|+|. |.++..+++..+ -.+|+++|.+++..+.+
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a 223 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLA 223 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHH
Confidence 78999999999874 677777777753 12799999999998887
No 329
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=88.92 E-value=0.58 Score=34.90 Aligned_cols=44 Identities=23% Similarity=0.413 Sum_probs=34.6
Q ss_pred ccCCCCEEEEEcCCC-ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGSGS-GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-+|+|. |..+..+++..+. .+|+++|.+++.++.+
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a 232 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGA-SRIIGVGTHKDKFPKA 232 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEECCCHHHHHHH
Confidence 367899999999873 6777777777531 2699999999888887
No 330
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=88.70 E-value=0.79 Score=34.08 Aligned_cols=43 Identities=21% Similarity=0.303 Sum_probs=35.4
Q ss_pred ccCCCCEEEEEcCCC-ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGSGS-GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-+|+|. |..+..+++.. +++|+++|.+++.++.+
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~ 229 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRA 229 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHH
Confidence 367899999999874 77777778775 45899999999988887
No 331
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=88.41 E-value=0.65 Score=34.62 Aligned_cols=43 Identities=23% Similarity=0.410 Sum_probs=34.3
Q ss_pred ccCCCCEEEEEcCCC-ChHHHHHHHHhCCCC-eEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGSGS-GYLTTCFAHMVGKNG-SVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~-~v~gvD~s~~~i~~a 119 (140)
.++++++||-+|+|. |..+..+++.. .+ +|+++|.+++.++.+
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~ 233 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSA--GAKRIIAVDLNPDKFEKA 233 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHH
Confidence 367899999999863 66777777765 34 699999999988887
No 332
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=88.30 E-value=1.8 Score=31.74 Aligned_cols=42 Identities=29% Similarity=0.283 Sum_probs=34.4
Q ss_pred cCCCCEEEEEcCC-CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSG-SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||-+|+| .|..+..+++.. +++|+++|.+++.++.+
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~ 204 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELA 204 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHH
Confidence 7889999999996 466777777765 35899999999988887
No 333
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=87.99 E-value=0.63 Score=38.39 Aligned_cols=47 Identities=19% Similarity=0.118 Sum_probs=36.2
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhCCC----CeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVGKN----GSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~~~----~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
+..+|+|+-||.|.++.-+.+.+... --+.++|+++.+++.- .|...
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~ 262 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQ 262 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTT
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCC
Confidence 34579999999999999988765210 1389999999999888 77543
No 334
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=87.84 E-value=0.75 Score=34.30 Aligned_cols=43 Identities=19% Similarity=0.279 Sum_probs=34.1
Q ss_pred ccCCCCEEEEEcCCC-ChHHHHHHHHhCCCC-eEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGSGS-GYLTTCFAHMVGKNG-SVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~-~v~gvD~s~~~i~~a 119 (140)
.++++++||-+|+|. |..+..+++.. .+ +|+++|.+++.++.+
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~ 232 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAA--GAARIIGVDINKDKFAKA 232 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHH
Confidence 367899999999864 66777777765 34 699999999888877
No 335
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=87.82 E-value=0.75 Score=34.23 Aligned_cols=44 Identities=25% Similarity=0.388 Sum_probs=34.1
Q ss_pred ccCCCCEEEEEcCCC-ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGSGS-GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-+|+|. |.++..+++..+. .+|+++|.+++.++.+
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~Ga-~~Vi~~~~~~~~~~~~ 231 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAGA-SRIIGVDINKDKFARA 231 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHH
Confidence 367899999999864 6677777776531 2699999999888877
No 336
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=87.69 E-value=0.78 Score=34.03 Aligned_cols=42 Identities=26% Similarity=0.291 Sum_probs=34.1
Q ss_pred cCCCCEEEEEcCC-CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSG-SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||-+|+| .|..+..+++..+ ++|+++|.+++.++.+
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~~ 219 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKREDA 219 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHH
Confidence 7889999999986 3667777777753 4799999998888877
No 337
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=87.62 E-value=0.6 Score=35.74 Aligned_cols=45 Identities=13% Similarity=0.084 Sum_probs=35.4
Q ss_pred CEEEEEcCCCChHHHHHHHHhCCCCe----EEEEcCCHHHHHHH-hchhh
Q psy7827 80 AKVLDVGSGSGYLTTCFAHMVGKNGS----VVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 80 ~~vLDiGcG~G~~~~~la~~~~~~~~----v~gvD~s~~~i~~a-~~~~~ 124 (140)
.+|+|+.||.|.++..+.+.+.+--- |.++|+++.+++.- .+...
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 48999999999999999887521112 78899999999877 76643
No 338
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=87.60 E-value=0.78 Score=34.20 Aligned_cols=43 Identities=19% Similarity=0.302 Sum_probs=34.2
Q ss_pred ccCCCCEEEEEcCC-CChHHHHHHHHhCCCC-eEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGSG-SGYLTTCFAHMVGKNG-SVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~-~v~gvD~s~~~i~~a 119 (140)
.++++++||-+|+| .|.++..+++.. .+ +|+++|.+++.++.+
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a 236 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIA--GASRIIAIDINGEKFPKA 236 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHH
Confidence 36789999999986 366777777775 34 699999999888887
No 339
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=87.41 E-value=0.64 Score=34.74 Aligned_cols=44 Identities=25% Similarity=0.369 Sum_probs=35.4
Q ss_pred ccCCCCEEEEEcCC-CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGSG-SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-+|+| .|.++..+++..+. .+|+++|.+++.++.+
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga-~~Vi~~~~~~~~~~~a 234 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAGA-SRIIGIDIDSKKYETA 234 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHTC-SCEEEECSCTTHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHH
Confidence 36789999999987 47777788877631 2699999999999888
No 340
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=87.40 E-value=1.8 Score=31.63 Aligned_cols=43 Identities=26% Similarity=0.306 Sum_probs=32.7
Q ss_pred cCCCCEEEEEcCCCC-hHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGSG-YLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~G-~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||=+|+|.+ .++..+++.. ...+|+++|.+++.++.+
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~-~g~~Vi~~~~~~~r~~~~ 204 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNV-FGAKVIAVDINQDKLNLA 204 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-SCCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHh-CCCEEEEEECcHHHhhhh
Confidence 688999999999864 4444555543 346899999999988877
No 341
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=86.81 E-value=1.9 Score=28.89 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=29.1
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcC
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEH 111 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~ 111 (140)
....-|||+|-|+|..--.|.+.+ ++-.|+.+|-
T Consensus 39 ~~~GpVlElGLGNGRTydHLRe~~-P~R~I~vfDR 72 (174)
T 3iht_A 39 GLSGPVYELGLGNGRTYHHLRQHV-QGREIYVFER 72 (174)
T ss_dssp TCCSCEEEECCTTCHHHHHHHHHC-CSSCEEEEES
T ss_pred CCCCceEEecCCCChhHHHHHHhC-CCCcEEEEEe
Confidence 345689999999999999999998 6677999984
No 342
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=86.53 E-value=1.3 Score=33.45 Aligned_cols=43 Identities=23% Similarity=0.293 Sum_probs=34.1
Q ss_pred ccCCCCEEEEEcCCC-ChHHHHHHHHhCCCC-eEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGSGS-GYLTTCFAHMVGKNG-SVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~-~v~gvD~s~~~i~~a 119 (140)
.++++++||=+|+|. |..+..+++.. ++ +|+++|.+++.++.+
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~~ 254 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHA--GASKVILSEPSEVRRNLA 254 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHH
Confidence 367899999999863 66667777765 34 799999999998888
No 343
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=86.29 E-value=1.9 Score=31.76 Aligned_cols=43 Identities=33% Similarity=0.492 Sum_probs=33.2
Q ss_pred cCCCCEEEEEcCC--CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSG--SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG--~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||-.|+| .|..+..+++.. ..++|+++|.+++.++.+
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~-~Ga~Vi~~~~~~~~~~~~ 212 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAV-SGATIIGVDVREEAVEAA 212 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHH-TCCEEEEEESSHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHH
Confidence 7789999999998 455566666654 134799999999888877
No 344
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=86.21 E-value=0.92 Score=30.41 Aligned_cols=42 Identities=21% Similarity=0.302 Sum_probs=31.9
Q ss_pred cCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||..|+ |.|..+..++... +.+|+++|.+++..+.+
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~ 79 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREML 79 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHH
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHH
Confidence 678999999995 4455666666554 34799999999888776
No 345
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=86.08 E-value=1.1 Score=32.74 Aligned_cols=46 Identities=20% Similarity=0.234 Sum_probs=36.3
Q ss_pred ccCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 75 KLVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 75 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
.++++++||-.|+ |.|..+..+++.. +++|++++.+++.++.+ +.+
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~~ 194 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLVEEL 194 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHc
Confidence 3788999999998 4566777777764 44899999999988887 654
No 346
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=85.90 E-value=0.7 Score=33.96 Aligned_cols=43 Identities=16% Similarity=0.180 Sum_probs=35.1
Q ss_pred ccCCCCEEEEEcCC--CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGSG--SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGcG--~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-+|+| .|..+..+++.. +++|+++|.+++.++.+
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~ 185 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEEL 185 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHH
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHH
Confidence 36789999999987 577777777776 34899999999888877
No 347
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=85.62 E-value=1.8 Score=31.84 Aligned_cols=43 Identities=19% Similarity=0.302 Sum_probs=35.0
Q ss_pred ccCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-+|+ |.|..+..+++.. +.+|++++.+++.++.+
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~ 207 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRA 207 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHH
Confidence 3678899999998 5677777777765 45899999999988877
No 348
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=85.28 E-value=2.8 Score=31.08 Aligned_cols=47 Identities=19% Similarity=0.192 Sum_probs=35.6
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
.+...|+.+|||.......+.... ++.+++-||. |+.++.- +.+...
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~-~~~~~~EvD~-P~vi~~K~~~l~~~ 143 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMF-PHLAYVDIDY-NESVELKNSILRES 143 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHC-TTEEEEEEEC-HHHHHHHHHHHHHS
T ss_pred CCCcEEEEeCCCCccHHHHhcCcC-CCCEEEECCC-HHHHHHHHHHhhhc
Confidence 355789999999999999998764 3456777777 7777776 665543
No 349
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=85.11 E-value=1.3 Score=37.81 Aligned_cols=44 Identities=23% Similarity=0.170 Sum_probs=35.7
Q ss_pred CCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
.-+++|+-||.|.++..+.+.+. .-.+.++|+++.+++.- .|+.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~-~~vv~avEid~~A~~ty~~N~p 584 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGI-SDTLWAIEMWDPAAQAFRLNNP 584 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTS-EEEEEEECSSHHHHHHHHHHCT
T ss_pred CCeEEEeccCccHHHHHHHHCCC-CceEEEEECCHHHHHHHHHhCC
Confidence 34799999999999999988753 11488999999999887 7764
No 350
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=84.45 E-value=1.2 Score=32.71 Aligned_cols=42 Identities=24% Similarity=0.264 Sum_probs=33.0
Q ss_pred cCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||-+|+ |.|..+..+++.. +.+|+++|.+++..+.+
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~ 210 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELF 210 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHH
Confidence 678999999998 4566666666664 35899999998888777
No 351
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=84.08 E-value=1.5 Score=31.99 Aligned_cols=43 Identities=21% Similarity=0.202 Sum_probs=33.0
Q ss_pred ccCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-.|+ |.|..+..+++.. +++|+++|.+++.++.+
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~ 186 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYL 186 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHH
Confidence 3678999999998 4555666666654 45899999999888777
No 352
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=84.05 E-value=1.7 Score=32.43 Aligned_cols=43 Identities=23% Similarity=0.368 Sum_probs=33.8
Q ss_pred cCCCCEEEEEcCC-CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSG-SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||-+|+| .|..+..+++..+ ..+|++++.+++.++.+
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~ 236 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLA 236 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHH
Confidence 6788999999976 4667777777653 13799999999988887
No 353
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=83.79 E-value=2.4 Score=31.52 Aligned_cols=46 Identities=20% Similarity=0.073 Sum_probs=35.9
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.+.++|+=+|| |..+..+++.+.....|+..|.+...++.+ +....
T Consensus 14 g~~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~~~~ 60 (365)
T 3abi_A 14 GRHMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKEFATP 60 (365)
T ss_dssp --CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTTTSEE
T ss_pred CCccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhccCCc
Confidence 35678999998 778888888776677899999999998888 65543
No 354
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=83.46 E-value=1.7 Score=27.33 Aligned_cols=39 Identities=13% Similarity=0.124 Sum_probs=28.6
Q ss_pred CCEEEEEcCCCChHHHHHHHHhC-CCCeEEEEcCCHHHHHHH
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMVG-KNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~i~~a 119 (140)
.++++=+|| |.++..+++.+. .+.+|+++|.+++.++.+
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~ 45 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELL 45 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHH
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHH
Confidence 457888888 557776666542 234699999999988777
No 355
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=83.45 E-value=3 Score=30.84 Aligned_cols=43 Identities=28% Similarity=0.404 Sum_probs=33.0
Q ss_pred cCCCCEEEEEcCC-CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSG-SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||-+|+| .|.++..+++.. .+++|+++|.+++-++.+
T Consensus 184 ~~~g~~VlV~GaG~vG~~avqlak~~-~Ga~Vi~~~~~~~~~~~~ 227 (359)
T 1h2b_A 184 LYPGAYVAIVGVGGLGHIAVQLLKVM-TPATVIALDVKEEKLKLA 227 (359)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHH-CCCEEEEEESSHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHH
Confidence 7889999999985 344556666665 134799999999988887
No 356
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=82.88 E-value=1.5 Score=32.13 Aligned_cols=46 Identities=24% Similarity=0.224 Sum_probs=35.5
Q ss_pred ccCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 75 KLVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 75 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
.++++++||-.|+ |.|..+..+++.. +++|++++.+++.++.+ +.+
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~~~ 200 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKTKF 200 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTS
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHc
Confidence 3678999999997 4666677777664 35899999999888887 444
No 357
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=82.68 E-value=1.2 Score=32.26 Aligned_cols=42 Identities=29% Similarity=0.122 Sum_probs=34.4
Q ss_pred ccCCCCEEEEEcCC-CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGSG-SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-+|+| .|.++..+++..+ ++|++++ +++..+.+
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~~~~~~ 181 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASLSQALA 181 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSCCHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-ChhhHHHH
Confidence 36789999999996 4778888888764 4899999 98888877
No 358
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=82.29 E-value=1.3 Score=35.94 Aligned_cols=42 Identities=12% Similarity=0.050 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhC------C-----CCeEEEEcC---CHHHHHHH
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVG------K-----NGSVVGVEH---IPEIVNHA 119 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~------~-----~~~v~gvD~---s~~~i~~a 119 (140)
+.-+|+|+|.|+|+..+.+.+... + ..+++++|. +.+-+..|
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~ 113 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASA 113 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHH
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHH
Confidence 345899999999999888876531 1 146999998 55666554
No 359
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=81.94 E-value=1.2 Score=28.30 Aligned_cols=39 Identities=18% Similarity=0.147 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCChHHHHHHHHhC-CCCeEEEEcCCHHHHHHH
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMVG-KNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~i~~a 119 (140)
.++|+=+|| |.++..+++... .+..|+++|.+++.++.+
T Consensus 7 ~~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~ 46 (140)
T 3fwz_A 7 CNHALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTRVDEL 46 (140)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHH
T ss_pred CCCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence 357888887 556655555442 234699999999998877
No 360
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=81.64 E-value=2.2 Score=31.37 Aligned_cols=42 Identities=26% Similarity=0.276 Sum_probs=32.5
Q ss_pred ccCCCCEEEEEcCCC-ChHHHHHHHHhCCCC-eEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGSGS-GYLTTCFAHMVGKNG-SVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~-~v~gvD~s~~~i~~a 119 (140)
.+ ++++||-+|+|. |..+..+++.. ++ +|+++|.+++.++.+
T Consensus 165 ~~-~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~ 208 (348)
T 2d8a_A 165 PI-SGKSVLITGAGPLGLLGIAVAKAS--GAYPVIVSEPSDFRRELA 208 (348)
T ss_dssp CC-TTCCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHH
Confidence 36 889999999952 66666667664 34 799999999888877
No 361
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=81.58 E-value=2.6 Score=31.17 Aligned_cols=45 Identities=22% Similarity=0.276 Sum_probs=34.6
Q ss_pred cC-CCCEEEEEcCC-CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 76 LV-PGAKVLDVGSG-SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 76 ~~-~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
+. ++++||-+|+| .|..+..+++..+ ++|++++.+++.++.+ +.+
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~~~~~~~~~~~~~l 224 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAMG--HHVTVISSSNKKREEALQDL 224 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSTTHHHHHHTTS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHc
Confidence 66 89999999976 3666677777753 4799999999888777 454
No 362
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=80.90 E-value=3 Score=33.65 Aligned_cols=42 Identities=14% Similarity=0.111 Sum_probs=31.8
Q ss_pred CEEEEEcCCCChHHHHHHHHhC-----------CCCeEEEEcC---CHHHHHHH-hc
Q psy7827 80 AKVLDVGSGSGYLTTCFAHMVG-----------KNGSVVGVEH---IPEIVNHA-SN 121 (140)
Q Consensus 80 ~~vLDiGcG~G~~~~~la~~~~-----------~~~~v~gvD~---s~~~i~~a-~~ 121 (140)
-+|+|+|-|+|...+...+... ..-+++++|. +++-+..+ ..
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~ 124 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQH 124 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTT
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHh
Confidence 4899999999998887766541 1235899998 88888766 53
No 363
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=79.94 E-value=4.7 Score=29.81 Aligned_cols=42 Identities=24% Similarity=0.297 Sum_probs=34.6
Q ss_pred cCCCCEEEEEc--CCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVG--SGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiG--cG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||-+| .|.|..+..+++.. +++|++++.+++.++.+
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~ 204 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFL 204 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHH
Confidence 67899999999 35777888888775 44899999999888877
No 364
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=79.85 E-value=3.5 Score=30.59 Aligned_cols=45 Identities=29% Similarity=0.372 Sum_probs=33.4
Q ss_pred cC-CCCEEEEEcCC-CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 76 LV-PGAKVLDVGSG-SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 76 ~~-~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
+. ++++||-+|+| .|..+..+++.. +++|++++.+++.++.+ +.+
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~l 231 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAF--GSKVTVISTSPSKKEEALKNF 231 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHHHTS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhc
Confidence 66 88999999975 255666666664 35899999999887776 444
No 365
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=79.73 E-value=1.3 Score=31.87 Aligned_cols=42 Identities=24% Similarity=0.247 Sum_probs=33.9
Q ss_pred cCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++++||-+|+ |.|..+..+++.. +++|++++.+++.++.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~ 166 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALP 166 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHH
Confidence 678999999998 4577777777775 34899999998887777
No 366
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=79.12 E-value=1.8 Score=31.76 Aligned_cols=41 Identities=20% Similarity=0.348 Sum_probs=32.4
Q ss_pred cCCCCEEEEEcCCC-ChHHHHHHHHhCCCC-eEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGS-GYLTTCFAHMVGKNG-SVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~-~v~gvD~s~~~i~~a 119 (140)
+ ++++||-+|+|. |..+..+++.. ++ +|+++|.+++.++.+
T Consensus 163 ~-~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~ 205 (343)
T 2dq4_A 163 V-SGKSVLITGAGPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFA 205 (343)
T ss_dssp C-TTSCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGG
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHH
Confidence 6 889999999853 56666677764 34 699999999888877
No 367
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=77.59 E-value=2.2 Score=31.33 Aligned_cols=43 Identities=23% Similarity=0.319 Sum_probs=34.5
Q ss_pred ccCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-+|+ |.|..+..+++.. +++|++++.+++.++.+
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~ 200 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFV 200 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHH
Confidence 3678999999997 4577777778775 45899999999888777
No 368
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=77.44 E-value=4.4 Score=24.12 Aligned_cols=40 Identities=18% Similarity=0.123 Sum_probs=28.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhC-CC-CeEEEEcCCHHHHHHH
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVG-KN-GSVVGVEHIPEIVNHA 119 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~-~~-~~v~gvD~s~~~i~~a 119 (140)
.+++|+=+|+ |.++..+++.+. .+ .+|+++|.+++..+..
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~ 45 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVL 45 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHH
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHH
Confidence 3468999998 777776665542 23 4799999999877655
No 369
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=77.26 E-value=3.2 Score=30.17 Aligned_cols=43 Identities=30% Similarity=0.526 Sum_probs=34.3
Q ss_pred ccCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-+|+ |.|..+..+++..+ ++|++++.+++.++.+
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~ 181 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIGTVSSPEKAAHA 181 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHH
Confidence 3678999999983 46777777777763 4899999999988887
No 370
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=77.23 E-value=6.6 Score=28.56 Aligned_cols=43 Identities=26% Similarity=0.336 Sum_probs=32.8
Q ss_pred cCCCCEEEEEcCCC-ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSGS-GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
+.++++||=.|+|. |.++..+++..+ ...++++|.+++.++.+
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a 201 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALA 201 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHH
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHH
Confidence 67899999999874 556666676653 23578999999988887
No 371
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=76.06 E-value=11 Score=26.65 Aligned_cols=49 Identities=22% Similarity=0.304 Sum_probs=35.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
+++.+|--|.+.|. ...+++.+ ..+++|+.+|.+++.++.+ +.+...+.
T Consensus 6 ~gKvalVTGas~GI-G~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~ 56 (254)
T 4fn4_A 6 KNKVVIVTGAGSGI-GRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK 56 (254)
T ss_dssp TTCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCCHH-HHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC
Confidence 57788888877665 34444333 3456799999999999988 88876654
No 372
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=75.73 E-value=12 Score=26.99 Aligned_cols=48 Identities=10% Similarity=0.180 Sum_probs=32.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
.++++|=.|++.|. +..+++.+ ..+.+|++++.+++.++.+ +.+...+
T Consensus 7 ~~k~vlVTGas~gI-G~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~ 56 (319)
T 3ioy_A 7 AGRTAFVTGGANGV-GIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG 56 (319)
T ss_dssp TTCEEEEETTTSTH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCchHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence 46788888877655 44444433 3455799999999988877 6665543
No 373
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=75.69 E-value=12 Score=26.37 Aligned_cols=48 Identities=23% Similarity=0.223 Sum_probs=32.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
.++++|=.|++. .++..+++.+ ..+.+|+.+|.+++.++.+ +.+...+
T Consensus 10 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~ 59 (281)
T 3svt_A 10 QDRTYLVTGGGS-GIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALG 59 (281)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC
Confidence 467888888654 4454554443 3345799999999888877 7766544
No 374
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=75.60 E-value=3.6 Score=29.84 Aligned_cols=43 Identities=16% Similarity=0.332 Sum_probs=33.0
Q ss_pred ccCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-.|+ |.|..+..+++.. +++|+++|.+++.++.+
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~ 181 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSA 181 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHH
Confidence 3678899999994 4566666666665 34799999999888877
No 375
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=75.47 E-value=3.9 Score=36.09 Aligned_cols=44 Identities=23% Similarity=0.163 Sum_probs=35.6
Q ss_pred CCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
..+++|+-||.|.++..+.+.+. .-.+.++|+++.+++.- .|+.
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~-~~vv~avEid~~A~~ty~~N~p 895 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGI-SETLWAIEMWDPAAQAFRLNNP 895 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTS-EEEEEEECCSHHHHHHHHHHCT
T ss_pred CceEEecccCccHHHHHHHHCCC-CceEEEEECCHHHHHHHHHhCC
Confidence 45899999999999999887642 11488999999999887 7654
No 376
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=75.31 E-value=16 Score=25.42 Aligned_cols=48 Identities=19% Similarity=0.156 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHH-hCCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHM-VGKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~-~~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
.++++|=.|++.|.- ..+++. ...+.+|+.++.+++.++.+ +.+...+
T Consensus 10 ~~k~vlVTGas~gIG-~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~ 59 (264)
T 3ucx_A 10 TDKVVVISGVGPALG-TTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG 59 (264)
T ss_dssp TTCEEEEESCCTTHH-HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred CCcEEEEECCCcHHH-HHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC
Confidence 567888888776653 333333 23345799999999888877 6665543
No 377
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=75.22 E-value=11 Score=26.87 Aligned_cols=48 Identities=15% Similarity=0.153 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
.++++|=.|++.| ++..+++.+ ..+.+|+.++.+++.++.+ +.+...+
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~ 79 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG 79 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence 5678888887755 444444433 3345799999999988887 7666543
No 378
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=74.83 E-value=6.4 Score=28.97 Aligned_cols=43 Identities=21% Similarity=0.210 Sum_probs=33.2
Q ss_pred ccCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-.|+ |.|..+..+++.. +++|++++.+++.++.+
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~ 211 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIV 211 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHH
Confidence 3678999999997 4556666666664 45899999999888876
No 379
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=74.66 E-value=5.6 Score=24.45 Aligned_cols=39 Identities=21% Similarity=0.294 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCChHHHHHHHHhC-CCCeEEEEcCCHHHHHHH
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMVG-KNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~i~~a 119 (140)
+++|+=+|+ |.++..+++.+. .+.+|+.+|.+++.++..
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~ 43 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKA 43 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 467888876 677766666542 234799999999887766
No 380
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=74.12 E-value=12 Score=25.64 Aligned_cols=47 Identities=15% Similarity=0.178 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
.++++|=.|++. .++..+++.+ ..+.+|+.++.+++.++.. +.+...
T Consensus 8 ~~k~vlITGas~-giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~ 56 (253)
T 3qiv_A 8 ENKVGIVTGSGG-GIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD 56 (253)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc
Confidence 467888888654 4455554443 3345799999999888877 666544
No 381
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=73.52 E-value=4.8 Score=29.82 Aligned_cols=41 Identities=22% Similarity=0.331 Sum_probs=32.8
Q ss_pred CCCEEEEEc-CC-CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 78 PGAKVLDVG-SG-SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 78 ~~~~vLDiG-cG-~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++||-+| +| .|.++..+++.. ...+|+++|.+++.++.+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~-~g~~Vi~~~~~~~~~~~~ 213 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQR-TDLTVIATASRPETQEWV 213 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHH-CCSEEEEECSSHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHH
Confidence 678999998 54 577888888864 245799999999988887
No 382
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=73.29 E-value=7.2 Score=28.31 Aligned_cols=43 Identities=28% Similarity=0.397 Sum_probs=33.6
Q ss_pred ccCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-.|+ |.|..+..+++.. +++|+++|.+++.++.+
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~ 186 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETA 186 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHH
Confidence 3678899999995 5666677777664 45899999999888777
No 383
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=72.69 E-value=4 Score=30.09 Aligned_cols=42 Identities=12% Similarity=0.141 Sum_probs=30.4
Q ss_pred cCCC------CEEEEEcCC-CChHH-HHHH-HHhCCCCe-EEEEcCCHH---HHHHH
Q psy7827 76 LVPG------AKVLDVGSG-SGYLT-TCFA-HMVGKNGS-VVGVEHIPE---IVNHA 119 (140)
Q Consensus 76 ~~~~------~~vLDiGcG-~G~~~-~~la-~~~~~~~~-v~gvD~s~~---~i~~a 119 (140)
++++ ++||-+|+| .|.++ ..++ +.. +++ |+++|.+++ .++.+
T Consensus 164 ~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~~~~~ 218 (357)
T 2b5w_A 164 ASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK--GYENLYCLGRRDRPDPTIDII 218 (357)
T ss_dssp HTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTT--CCCEEEEEECCCSSCHHHHHH
T ss_pred CCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHc--CCcEEEEEeCCcccHHHHHHH
Confidence 6788 999999984 24455 5555 443 345 999999987 77777
No 384
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=72.65 E-value=6.2 Score=28.67 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=34.1
Q ss_pred ccCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-+|+ |.|..+..+++.. +++|++++.+++.++.+
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~ 189 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIA 189 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHH
Confidence 3678999999994 4566777777764 45899999999988877
No 385
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=71.90 E-value=9.3 Score=26.54 Aligned_cols=48 Identities=15% Similarity=0.117 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
.++++|=.|++.| ++..+++.+ ..+.+|+.++.+++.++.+ +.+...+
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~ 55 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG 55 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC
Confidence 4677888887655 444444433 3345799999998887777 6665543
No 386
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=71.59 E-value=13 Score=26.59 Aligned_cols=34 Identities=18% Similarity=0.245 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCCChHHHHHHHH---h---CCCCeEEEEc
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHM---V---GKNGSVVGVE 110 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~---~---~~~~~v~gvD 110 (140)
.-+..|+|+||-.|..+..++.. + +++.+++++|
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fD 107 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFD 107 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEE
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEE
Confidence 45679999999999999987653 1 2456899999
No 387
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=71.43 E-value=13 Score=25.92 Aligned_cols=48 Identities=13% Similarity=0.110 Sum_probs=32.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.. +.+...+
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~ 77 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG 77 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC
Confidence 56788888865 55555555543 3455799999999888877 6665543
No 388
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=71.29 E-value=19 Score=24.91 Aligned_cols=48 Identities=19% Similarity=0.196 Sum_probs=30.5
Q ss_pred CCCEEEEEcC-CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGS-GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGc-G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
.++++|=.|+ |.|.-..........+.+|+.++.+++.++.. +.+...
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~ 70 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL 70 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc
Confidence 4678888887 55553332222223345799999998888777 666443
No 389
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=70.96 E-value=6.6 Score=25.77 Aligned_cols=39 Identities=23% Similarity=0.215 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCChHHHHHHHHhCC--CCeEEEEcCCHHHHHHH
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMVGK--NGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~~~--~~~v~gvD~s~~~i~~a 119 (140)
+++|+=+|| |.++..+++.... +.+|+++|.+++.++.+
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~ 79 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQQH 79 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH
T ss_pred CCcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHH
Confidence 568888876 5555555544321 23699999999888776
No 390
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=70.95 E-value=2.9 Score=26.83 Aligned_cols=41 Identities=20% Similarity=0.203 Sum_probs=27.8
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhC-CCCeEEEEcCCHHHHHHH
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVG-KNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~i~~a 119 (140)
.++++|+=+|| |.++..+++... .+.+|+.+|.+++.++.+
T Consensus 17 ~~~~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~~~~~~~~~ 58 (155)
T 2g1u_A 17 QKSKYIVIFGC--GRLGSLIANLASSSGHSVVVVDKNEYAFHRL 58 (155)
T ss_dssp CCCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGGGGGS
T ss_pred cCCCcEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 46789999987 566655555432 234799999998766544
No 391
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=70.81 E-value=9 Score=28.01 Aligned_cols=40 Identities=20% Similarity=0.276 Sum_probs=31.6
Q ss_pred CCCEEEEEc-CC-CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 78 PGAKVLDVG-SG-SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 78 ~~~~vLDiG-cG-~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++++||-+| +| .|..+..+++.. +++|++++.+++.++.+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~ 191 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY--GLRVITTASRNETIEWT 191 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCSHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHH
Confidence 789999994 44 566777777765 45899999999988887
No 392
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=70.53 E-value=16 Score=25.02 Aligned_cols=48 Identities=17% Similarity=0.149 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++..+.. +.+...+
T Consensus 4 ~~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~ 53 (247)
T 3lyl_A 4 NEKVALVTGAS-RGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG 53 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC
Confidence 35677777754 45555554443 2345799999998888777 6665543
No 393
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=70.00 E-value=14 Score=27.17 Aligned_cols=37 Identities=16% Similarity=0.081 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhC---CCCeEEEEcCCHH
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVG---KNGSVVGVEHIPE 114 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~---~~~~v~gvD~s~~ 114 (140)
.+..|+=+|||.|.-...|++... ...+.+.+|+.+.
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~ 99 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHH 99 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcc
Confidence 467999999999999999999764 3457999998664
No 394
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=70.00 E-value=7.5 Score=28.59 Aligned_cols=43 Identities=16% Similarity=0.138 Sum_probs=32.8
Q ss_pred ccCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-.|+ |.|..+..+++.. +++|+++|.+++.++.+
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~ 203 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMA 203 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHH
Confidence 3678899999984 4566666666664 45899999999888777
No 395
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=69.76 E-value=16 Score=25.66 Aligned_cols=48 Identities=17% Similarity=0.194 Sum_probs=31.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
.++++|=.|++.| ++..+++.+ ..+.+|+.++.+++.++.+ +.+...+
T Consensus 23 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~ 72 (279)
T 3sju_A 23 RPQTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG 72 (279)
T ss_dssp --CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC
Confidence 4678888886654 444444433 2345799999999888877 6665543
No 396
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=69.74 E-value=20 Score=25.09 Aligned_cols=48 Identities=17% Similarity=0.183 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
.++++|=.|+ +|.++..+++.+ ..+.+|+.++.+++.++.. +.+...+
T Consensus 31 ~~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~ 80 (279)
T 1xg5_A 31 RDRLALVTGA-SGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG 80 (279)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcC
Confidence 4567887775 455555555543 2345799999998877766 6555443
No 397
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=69.62 E-value=15 Score=25.81 Aligned_cols=48 Identities=8% Similarity=-0.080 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
.++++|=.|++. .++..+++.+ ..+.+|+.++.+++..+.+ +.+...+
T Consensus 11 ~~k~vlITGas~-GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~ 60 (311)
T 3o26_A 11 KRRCAVVTGGNK-GIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN 60 (311)
T ss_dssp -CCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT
T ss_pred CCcEEEEecCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC
Confidence 466788778664 4555554443 3455799999999888777 6665543
No 398
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=69.52 E-value=5.5 Score=30.51 Aligned_cols=43 Identities=26% Similarity=0.282 Sum_probs=34.6
Q ss_pred ccCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||=+|+ |.|.++..+++.. ++++++++.+++-++.+
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~ 269 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEIC 269 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHH
Confidence 3678999999997 3577777778775 45799999999888887
No 399
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=69.02 E-value=21 Score=24.44 Aligned_cols=46 Identities=7% Similarity=0.087 Sum_probs=30.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|+ +|.++..+++.+ ..+.+|+.++.+++..+.. +.+..
T Consensus 12 ~~k~vlItGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~ 59 (260)
T 3awd_A 12 DNRVAIVTGG-AQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRM 59 (260)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 4667887775 455666555544 2345799999988776665 55544
No 400
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=68.79 E-value=4.1 Score=31.58 Aligned_cols=38 Identities=29% Similarity=0.357 Sum_probs=24.5
Q ss_pred CEEEEEcCCCChHHHHHHHHhC-CCCeEEEEcCCHHHHHHH
Q psy7827 80 AKVLDVGSGSGYLTTCFAHMVG-KNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 80 ~~vLDiGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~i~~a 119 (140)
.+|--|| .|+.++.++..+. .+.+|+|+|++++.++..
T Consensus 22 ~~IaViG--lGYVGLp~A~~~A~~G~~V~g~Did~~kV~~l 60 (444)
T 3vtf_A 22 ASLSVLG--LGYVGVVHAVGFALLGHRVVGYDVNPSIVERL 60 (444)
T ss_dssp CEEEEEC--CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH
T ss_pred CEEEEEc--cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHH
Confidence 3677776 5555554443332 123699999999988766
No 401
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=67.16 E-value=23 Score=24.65 Aligned_cols=47 Identities=15% Similarity=0.037 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
.++++|=.|+ +|.++..+++.+ ..+.+|+.++.+++.++.. +.+...
T Consensus 30 ~~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~ 78 (272)
T 1yb1_A 30 TGEIVLITGA-GHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL 78 (272)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc
Confidence 4567887775 456666665544 2345799999998877766 555443
No 402
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=67.06 E-value=23 Score=25.06 Aligned_cols=47 Identities=19% Similarity=0.256 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
.++++|=.|++.| ++..+++.+ ..+.+|+.++.+++.++.+ +.+...
T Consensus 27 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~ 75 (283)
T 3v8b_A 27 PSPVALITGAGSG-IGRATALALAADGVTVGALGRTRTEVEEVADEIVGA 75 (283)
T ss_dssp CCCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc
Confidence 4678888886655 444444433 3455799999999888777 665543
No 403
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=66.65 E-value=15 Score=25.41 Aligned_cols=46 Identities=15% Similarity=0.112 Sum_probs=30.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.+ +.+..
T Consensus 5 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 52 (257)
T 3imf_A 5 KEKVVIITGGS-SGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ 52 (257)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 45677777755 44555554443 2345799999999888777 66544
No 404
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=66.61 E-value=13 Score=26.30 Aligned_cols=49 Identities=18% Similarity=0.280 Sum_probs=34.2
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
.|+++|--|.+.|. ...+++.+ ..+++|+..|.+++.++.+ +.+.+.+.
T Consensus 8 ~gKvalVTGas~GI-G~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~ 58 (255)
T 4g81_D 8 TGKTALVTGSARGL-GFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY 58 (255)
T ss_dssp TTCEEEETTCSSHH-HHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC
Confidence 57778877766654 44444433 3456799999999998888 77776654
No 405
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=66.52 E-value=13 Score=25.41 Aligned_cols=40 Identities=13% Similarity=-0.123 Sum_probs=29.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
..++++=+|+ |.++..+++.....+.|+.+|.+++.++.+
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~ 47 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVL 47 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHH
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHH
Confidence 4567888876 789988988875433499999999877654
No 406
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=66.42 E-value=16 Score=25.31 Aligned_cols=48 Identities=17% Similarity=0.144 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
.++++|=.|++.|. +..+++.+ ..+.+|+.+|.+++..+.. +.+...+
T Consensus 11 ~~k~vlVTGas~gI-G~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~ 60 (256)
T 3gaf_A 11 NDAVAIVTGAAAGI-GRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG 60 (256)
T ss_dssp TTCEEEECSCSSHH-HHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC
Confidence 46778888866554 44444332 2244699999999888777 6665543
No 407
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=66.34 E-value=19 Score=25.32 Aligned_cols=48 Identities=8% Similarity=0.090 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
.++++|=.|++.| ++..+++.+ ..+.+|+.++.+++.++.+ +.+...+
T Consensus 3 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~ 52 (264)
T 3tfo_A 3 MDKVILITGASGG-IGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG 52 (264)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCccH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence 3567777776654 444444433 3345799999998888777 6665543
No 408
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=66.26 E-value=11 Score=27.75 Aligned_cols=43 Identities=21% Similarity=0.207 Sum_probs=33.6
Q ss_pred ccCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-+|. |.|..+..+++.. +++|+++|.+++.++.+
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~ 208 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEAC 208 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHH
Confidence 3678999999953 3577777777765 45899999999988887
No 409
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=65.99 E-value=27 Score=23.72 Aligned_cols=46 Identities=17% Similarity=0.175 Sum_probs=30.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.| |+|.++..+++.+ ..+.+|+.++.+++..+.. +.+..
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 57 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ 57 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHH
Confidence 456777777 4566666666654 3345799999988776665 55543
No 410
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=65.15 E-value=22 Score=22.15 Aligned_cols=48 Identities=23% Similarity=0.234 Sum_probs=33.0
Q ss_pred HHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCC-CCeEEEEcCCHHHHHHH
Q psy7827 68 VLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGK-NGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 68 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~~~v~gvD~s~~~i~~a 119 (140)
.++.+. ...+++|+=+|| |..+..+++.+.. +.+++.+|.+++..+..
T Consensus 12 a~~~~~--~~~~~~v~iiG~--G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~ 60 (144)
T 3oj0_A 12 VYDIVR--KNGGNKILLVGN--GMLASEIAPYFSYPQYKVTVAGRNIDHVRAF 60 (144)
T ss_dssp HHHHHH--HHCCCEEEEECC--SHHHHHHGGGCCTTTCEEEEEESCHHHHHHH
T ss_pred HHHHHH--hccCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHH
Confidence 344444 334889999997 6777777666532 34699999999877664
No 411
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=65.13 E-value=8.5 Score=29.76 Aligned_cols=42 Identities=12% Similarity=0.177 Sum_probs=31.4
Q ss_pred CCEEEEEcCCCChHHHHHHHHhCCC-CeEEEEcCCHHHHHHH-hch
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMVGKN-GSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~~~~-~~v~gvD~s~~~i~~a-~~~ 122 (140)
.++|+=+|| |..+..+++..... -.|+.||.+++.++.+ .++
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~ 46 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY 46 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc
Confidence 456666555 67888888877543 3699999999999887 654
No 412
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=65.07 E-value=15 Score=26.92 Aligned_cols=45 Identities=20% Similarity=0.304 Sum_probs=33.3
Q ss_pred cCCC--CEEEEEcC--CCChHHHHHHHHhCCCC-eEEEEcCCHHHHHHH-hch
Q psy7827 76 LVPG--AKVLDVGS--GSGYLTTCFAHMVGKNG-SVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 76 ~~~~--~~vLDiGc--G~G~~~~~la~~~~~~~-~v~gvD~s~~~i~~a-~~~ 122 (140)
++++ ++||-.|+ |.|..+..+++.. ++ +|++++.+++.++.+ +.+
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~~~ 206 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTSEL 206 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTS
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHHc
Confidence 6788 99999998 3455555556553 45 799999999888877 533
No 413
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=64.74 E-value=29 Score=23.78 Aligned_cols=46 Identities=15% Similarity=0.148 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.. +.+..
T Consensus 6 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~ 53 (247)
T 2jah_A 6 QGKVALITGAS-SGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA 53 (247)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence 35678888855 45555554443 2345799999988877766 65544
No 414
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=64.72 E-value=6 Score=29.35 Aligned_cols=34 Identities=29% Similarity=0.300 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCChHHHH--HHHHhCCCCeEEEEcCCH
Q psy7827 79 GAKVLDVGSGSGYLTTC--FAHMVGKNGSVVGVEHIP 113 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~--la~~~~~~~~v~gvD~s~ 113 (140)
|++|+=||.|.+.++.+ |.+. +++.+|+-||.++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-DPSIEVTLIEPNE 37 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CTTSEEEEECSCS
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-CcCCeEEEEeCCC
Confidence 68999999999887765 4444 4667899999765
No 415
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=64.67 E-value=20 Score=24.95 Aligned_cols=47 Identities=19% Similarity=0.198 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.. +.+...
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~ 57 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQ 57 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh
Confidence 46678877765 44555555443 3345799999999888777 666544
No 416
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=64.57 E-value=27 Score=24.16 Aligned_cols=46 Identities=17% Similarity=0.219 Sum_probs=29.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|++. .++..+++.+ ..+.+|+.++.+++.++.. +.+..
T Consensus 6 ~~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 53 (262)
T 1zem_A 6 NGKVCLVTGAGG-NIGLATALRLAEEGTAIALLDMNREALEKAEASVRE 53 (262)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 456788777654 4555554443 2345799999998877766 55543
No 417
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=64.41 E-value=28 Score=24.37 Aligned_cols=46 Identities=11% Similarity=-0.002 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.. +.+..
T Consensus 21 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~ 68 (277)
T 2rhc_B 21 DSEVALVTGAT-SGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE 68 (277)
T ss_dssp TSCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 35678888865 55555555443 2345799999998877766 55544
No 418
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=64.34 E-value=9.4 Score=28.11 Aligned_cols=34 Identities=26% Similarity=0.374 Sum_probs=21.9
Q ss_pred CCCEEEEEcCCCChHHHHHHH---HhCCCC--eEEEEcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAH---MVGKNG--SVVGVEH 111 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~---~~~~~~--~v~gvD~ 111 (140)
+.-+|||+|-|+|.......+ ..++.. +++++|.
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek 134 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEK 134 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEES
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecH
Confidence 345799999999997654332 234444 4567764
No 419
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=64.15 E-value=8.8 Score=28.31 Aligned_cols=39 Identities=28% Similarity=0.158 Sum_probs=28.9
Q ss_pred CCEEEEEcCC-CChHHHHHHHHhCCCCeEEEEcCCH---HHHHHH
Q psy7827 79 GAKVLDVGSG-SGYLTTCFAHMVGKNGSVVGVEHIP---EIVNHA 119 (140)
Q Consensus 79 ~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~---~~i~~a 119 (140)
+++||-+|+| .|..+..+++..+ ++|+++|.++ +.++.+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~~ 223 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYG--LEVWMANRREPTEVEQTVI 223 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHT--CEEEEEESSCCCHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCccchHHHHHH
Confidence 9999999984 2555566666653 4799999998 766666
No 420
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=64.03 E-value=27 Score=24.08 Aligned_cols=46 Identities=15% Similarity=0.129 Sum_probs=29.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|+ +|.++..+++.+ ..+.+|+.++.+++.++.. +.+..
T Consensus 8 ~~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 55 (260)
T 2ae2_A 8 EGCTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS 55 (260)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 4567887775 455555555443 2345799999988877766 55543
No 421
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=63.97 E-value=8.6 Score=29.31 Aligned_cols=39 Identities=18% Similarity=0.300 Sum_probs=28.1
Q ss_pred CCEEEEEcCCCChHHHHHHHHhC-CCCeEEEEcCCHHHHHHH
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMVG-KNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~i~~a 119 (140)
.++|+=+|+ |.++..+++... .+..|+.||.+++.++.+
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~ 43 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETL 43 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHH
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence 456777776 666666666542 234699999999999887
No 422
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=63.54 E-value=16 Score=25.85 Aligned_cols=46 Identities=15% Similarity=0.214 Sum_probs=30.2
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|++.| ++..+++.+ ..+.+|+.++.+++.++.. +.+..
T Consensus 7 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~ 54 (280)
T 3tox_A 7 EGKIAIVTGASSG-IGRAAALLFAREGAKVVVTARNGNALAELTDEIAG 54 (280)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence 4667888786654 444444433 3345799999999888777 66544
No 423
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=63.48 E-value=8.5 Score=29.24 Aligned_cols=43 Identities=23% Similarity=0.220 Sum_probs=33.8
Q ss_pred ccCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-.|+ |.|..+..+++.. ++++++++.+++.++.+
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~ 261 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAV 261 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHH
Confidence 3678999999997 3566777777765 45799999999888877
No 424
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=63.37 E-value=31 Score=24.06 Aligned_cols=46 Identities=11% Similarity=0.101 Sum_probs=30.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.. +.+..
T Consensus 20 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 67 (273)
T 1ae1_A 20 KGTTALVTGGS-KGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE 67 (273)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCc-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 46678888864 55555555443 2345799999998877766 55544
No 425
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=63.03 E-value=25 Score=24.40 Aligned_cols=48 Identities=13% Similarity=0.148 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
.++++|=.|.+ |.++..+++.+ ..+.+|+.++.+++.++.+ +.+...+
T Consensus 9 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~ 58 (262)
T 3pk0_A 9 QGRSVVVTGGT-KGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG 58 (262)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC
Confidence 46677777755 45555555543 2345799999999888877 6665543
No 426
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=62.69 E-value=8.2 Score=28.71 Aligned_cols=41 Identities=15% Similarity=0.132 Sum_probs=30.8
Q ss_pred CCCCEEEEEcCCC---ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 77 VPGAKVLDVGSGS---GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 77 ~~~~~vLDiGcG~---G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++||=+|+|+ |..+..+++..+ ++|++++.+++-++.+
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~G--a~Vi~~~~~~~~~~~~ 212 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDG--IKLVNIVRKQEQADLL 212 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHT--CCEEEEESSHHHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHH
Confidence 5788999985554 555566666653 4799999999988888
No 427
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=62.68 E-value=34 Score=23.73 Aligned_cols=46 Identities=17% Similarity=0.161 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|++.| ++..+++.+ ..+.+|+.++.+++.++.+ +.+..
T Consensus 7 ~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~ 54 (265)
T 3lf2_A 7 SEAVAVVTGGSSG-IGLATVELLLEAGAAVAFCARDGERLRAAESALRQ 54 (265)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 4678888886655 444444433 3345799999999888877 66654
No 428
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=62.61 E-value=23 Score=24.81 Aligned_cols=46 Identities=20% Similarity=0.179 Sum_probs=30.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.. +.+..
T Consensus 27 ~~k~vlITGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 74 (286)
T 1xu9_A 27 QGKKVIVTGAS-KGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE 74 (286)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
Confidence 46688888854 55555555443 2345799999998877766 55443
No 429
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=62.29 E-value=3.1 Score=30.20 Aligned_cols=42 Identities=24% Similarity=0.231 Sum_probs=32.7
Q ss_pred cCCCC-EEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGA-KVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~-~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
+++++ +||-+|+ |.|..+..+++..+ ++|++++.+++.++.+
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~ 190 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRG--YTVEASTGKAAEHDYL 190 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCTTCHHHH
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHH
Confidence 56675 8999997 46777777887753 4799999998877777
No 430
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=62.00 E-value=18 Score=25.43 Aligned_cols=48 Identities=17% Similarity=0.129 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.. +.+...+
T Consensus 25 ~gk~~lVTGas-~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~ 74 (271)
T 4ibo_A 25 GGRTALVTGSS-RGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG 74 (271)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC
Confidence 56788877755 44555555443 3345799999999888877 7665543
No 431
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=61.81 E-value=35 Score=25.41 Aligned_cols=45 Identities=16% Similarity=0.227 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhCC-C-CeEEEEcCCHHHHHHH-hchh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVGK-N-GSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~~-~-~~v~gvD~s~~~i~~a-~~~~ 123 (140)
.+++||=.| |+|.++..+++.+.. + .+|++++.++..+... +.+.
T Consensus 34 ~~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~ 81 (399)
T 3nzo_A 34 SQSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIR 81 (399)
T ss_dssp HTCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHH
T ss_pred CCCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHH
Confidence 367898888 568888887776533 3 4799999999887766 5543
No 432
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=60.87 E-value=17 Score=24.82 Aligned_cols=48 Identities=15% Similarity=0.164 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.. +.+...+
T Consensus 13 ~~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~ 62 (247)
T 3i1j_A 13 KGRVILVTGAA-RGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG 62 (247)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC
Confidence 46678877765 45555554443 2345799999998888877 6665543
No 433
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=60.83 E-value=36 Score=24.16 Aligned_cols=48 Identities=15% Similarity=0.295 Sum_probs=29.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCC------------HHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHI------------PEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s------------~~~i~~a-~~~~~~~ 126 (140)
.++++|=.|++.|. +..+++.+ ..+.+|+.+|.+ ++.++.+ +.+...+
T Consensus 27 ~gk~~lVTGas~GI-G~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (299)
T 3t7c_A 27 EGKVAFITGAARGQ-GRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG 88 (299)
T ss_dssp TTCEEEEESTTSHH-HHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCHH-HHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC
Confidence 46788888876654 44444433 334579999876 5666655 5554443
No 434
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=60.46 E-value=35 Score=23.70 Aligned_cols=47 Identities=15% Similarity=0.215 Sum_probs=28.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCC------------HHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHI------------PEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s------------~~~i~~a-~~~~~~ 125 (140)
.++++|=.|++. .++..+++.+ ..+.+|+.+|.+ ++.++.. +.+...
T Consensus 12 ~gk~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (278)
T 3sx2_A 12 TGKVAFITGAAR-GQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI 72 (278)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc
Confidence 567888888554 4444444443 234579999876 6666555 544443
No 435
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=60.36 E-value=41 Score=23.61 Aligned_cols=46 Identities=13% Similarity=0.138 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|+ +|.++..+++.+ ..+.+|+.++.+++.++.. +.+..
T Consensus 17 ~~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~ 64 (303)
T 1yxm_A 17 QGQVAIVTGG-ATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQA 64 (303)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 4568888885 566666665544 2345799999998877766 55543
No 436
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=60.21 E-value=27 Score=24.05 Aligned_cols=47 Identities=11% Similarity=0.102 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
.++++|=.|++.|. +..+++.+ ..+.+|+.++.+++.++.+ +.+...
T Consensus 6 ~~k~~lVTGas~GI-G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~ 54 (250)
T 3nyw_A 6 QKGLAIITGASQGI-GAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRS 54 (250)
T ss_dssp CCCEEEEESTTSHH-HHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh
Confidence 46688888876554 34443332 2245799999999888877 666543
No 437
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=60.11 E-value=39 Score=23.34 Aligned_cols=46 Identities=20% Similarity=0.145 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.+ +.+..
T Consensus 12 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 59 (267)
T 1iy8_A 12 TDRVVLITGGG-SGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLE 59 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 46678888865 55555555443 2345799999998877766 55543
No 438
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=60.06 E-value=13 Score=27.24 Aligned_cols=40 Identities=30% Similarity=0.210 Sum_probs=26.6
Q ss_pred CEEEEEcCCC--ChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hch
Q psy7827 80 AKVLDVGSGS--GYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 80 ~~vLDiGcG~--G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
.+|--||+|+ +.++..+++.+ .+|+..|++++.++.+ +++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G---~~V~l~d~~~~~~~~~~~~i 49 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGG---FRVKLYDIEPRQITGALENI 49 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEECSCHHHHHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHH
Confidence 4677788763 22334444443 2599999999998887 653
No 439
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=60.05 E-value=37 Score=23.74 Aligned_cols=34 Identities=15% Similarity=0.261 Sum_probs=22.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHI 112 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s 112 (140)
.++++|=.|++.|. +..+++.+ ..+.+|+.+|.+
T Consensus 10 ~~k~~lVTGas~gI-G~aia~~la~~G~~V~~~~~~ 44 (286)
T 3uve_A 10 EGKVAFVTGAARGQ-GRSHAVRLAQEGADIIAVDIC 44 (286)
T ss_dssp TTCEEEEESTTSHH-HHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCchH-HHHHHHHHHHCCCeEEEEecc
Confidence 56788888876654 44444433 345579999887
No 440
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=60.04 E-value=20 Score=25.23 Aligned_cols=47 Identities=13% Similarity=0.221 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
.++++|=.|++.| ++..+++.+ ..+.+|+.++.+++.++.. +.+...
T Consensus 31 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~ 79 (276)
T 3r1i_A 31 SGKRALITGASTG-IGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV 79 (276)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc
Confidence 5678888886654 444444433 3345799999988877776 665544
No 441
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=59.99 E-value=4.4 Score=29.40 Aligned_cols=42 Identities=26% Similarity=0.299 Sum_probs=32.2
Q ss_pred cCCCC-EEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGA-KVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~-~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
+++++ +||-+|+ |.|..+..+++..+ +++++++.+++.++.+
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~ 191 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRG--YDVVASTGNREAADYL 191 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHT--CCEEEEESSSSTHHHH
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHH
Confidence 56675 8999997 46777777777764 4699999988777766
No 442
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=59.98 E-value=18 Score=28.44 Aligned_cols=42 Identities=29% Similarity=0.151 Sum_probs=29.3
Q ss_pred cCCCCEEEEEcCC-CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 76 LVPGAKVLDVGSG-SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 76 ~~~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
...+++|+=+|+| .|......++.. +.+|+++|+++...+.|
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A 313 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQA 313 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHH
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHH
Confidence 4678999999985 233333334443 34899999999887766
No 443
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=59.94 E-value=38 Score=23.56 Aligned_cols=34 Identities=15% Similarity=0.171 Sum_probs=21.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHI 112 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s 112 (140)
.++++|=-|++.| ++..+++.+ ..+.+|+.+|.+
T Consensus 9 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 9 QDKVVLVTGGARG-QGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEccc
Confidence 4667888886654 444444433 334578888876
No 444
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=59.42 E-value=28 Score=24.34 Aligned_cols=46 Identities=13% Similarity=0.103 Sum_probs=29.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.. +.+..
T Consensus 5 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 52 (280)
T 1xkq_A 5 SNKTVIITGSS-NGIGRTTAILFAQEGANVTITGRSSERLEETRQIILK 52 (280)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 35677777754 45555555443 2345799999998877766 55543
No 445
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=59.37 E-value=34 Score=24.27 Aligned_cols=46 Identities=15% Similarity=0.127 Sum_probs=30.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.. +.+..
T Consensus 33 ~~k~vlVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~ 80 (291)
T 3cxt_A 33 KGKIALVTGAS-YGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKA 80 (291)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 46678888854 55555555543 2345799999998877766 55544
No 446
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=59.21 E-value=14 Score=28.33 Aligned_cols=40 Identities=23% Similarity=0.399 Sum_probs=30.7
Q ss_pred CCCEEEEEcCC-CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 78 PGAKVLDVGSG-SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 78 ~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++.+|+=+|+| .|..+..++... +++|+++|.++..++.+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~ 229 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQV 229 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHH
Confidence 56899999998 455555556655 44899999999888877
No 447
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=58.56 E-value=35 Score=23.46 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=29.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|+ +|.++..+++.+ ..+.+|+.++.+++.++.. +.+..
T Consensus 13 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~ 60 (260)
T 2zat_A 13 ENKVALVTAS-TDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG 60 (260)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 4567877775 455555555543 2345799999988777666 55544
No 448
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=58.54 E-value=13 Score=27.08 Aligned_cols=42 Identities=19% Similarity=0.175 Sum_probs=32.7
Q ss_pred ccCCCCEEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 75 KLVPGAKVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 75 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++++||-+|+ |.|..+..+++.. +++|+++ .+++.++.+
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~ 190 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYV 190 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHH
Confidence 3678999999994 3577777778775 4489999 888888777
No 449
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=58.47 E-value=40 Score=23.18 Aligned_cols=45 Identities=16% Similarity=0.164 Sum_probs=28.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.+ +.+.
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~ 52 (263)
T 3ai3_A 6 SGKVAVITGSS-SGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLK 52 (263)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence 45678877755 55555555543 2345799999988777666 5543
No 450
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=58.33 E-value=29 Score=23.89 Aligned_cols=46 Identities=9% Similarity=0.050 Sum_probs=28.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.+ +.+..
T Consensus 4 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 51 (260)
T 2qq5_A 4 NGQVCVVTGAS-RGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQS 51 (260)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 35677777754 45555555443 2345788888888777666 55543
No 451
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=58.09 E-value=7.7 Score=23.85 Aligned_cols=39 Identities=18% Similarity=0.170 Sum_probs=27.4
Q ss_pred CCEEEEEcCCCChHHHHHHHHhC-CCCeEEEEcCCHHHHHHH
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMVG-KNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~i~~a 119 (140)
+++|+=+|+ |.++..+++... .+.+|+.+|.+++..+.+
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~ 45 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAY 45 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 457888886 677776666542 234699999998776655
No 452
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=57.86 E-value=7.2 Score=28.10 Aligned_cols=37 Identities=19% Similarity=0.209 Sum_probs=30.3
Q ss_pred EEEEEcC--CCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 81 KVLDVGS--GSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 81 ~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
+||=+|+ |.|..+..+++.. +++|++++.+++..+.+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~--Ga~Vi~~~~~~~~~~~~ 187 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL--GYQVAAVSGRESTHGYL 187 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHH
Confidence 4999997 4677888888876 34799999999988887
No 453
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=57.72 E-value=34 Score=23.34 Aligned_cols=46 Identities=15% Similarity=0.024 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhC--CCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVG--KNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~--~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
+++++|=.| |+|.++..+++.+. .+.+|+.++.+++..+.. +.+..
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~ 51 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA 51 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHh
Confidence 456777666 56777776666542 345799999988777666 55544
No 454
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=57.63 E-value=27 Score=24.41 Aligned_cols=48 Identities=8% Similarity=0.060 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
.++++|=-|++ |.++..+++.+ ..+.+|+.++.+++..+.. +.+...+
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~ 76 (270)
T 3ftp_A 27 DKQVAIVTGAS-RGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG 76 (270)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC
Confidence 45677777754 45555554443 2345799999998888777 6665543
No 455
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=57.36 E-value=44 Score=23.29 Aligned_cols=47 Identities=15% Similarity=0.242 Sum_probs=28.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcC-------------CHHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEH-------------IPEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~-------------s~~~i~~a-~~~~~~ 125 (140)
.++++|=.|++.|. +..+++.+ ..+.+|+.+|. +++.++.. +.+...
T Consensus 14 ~gk~~lVTGas~gI-G~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (280)
T 3pgx_A 14 QGRVAFITGAARGQ-GRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ 75 (280)
T ss_dssp TTCEEEEESTTSHH-HHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCcHH-HHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc
Confidence 56788888866554 44444433 33457999887 56666666 555443
No 456
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=57.14 E-value=35 Score=23.43 Aligned_cols=46 Identities=13% Similarity=0.083 Sum_probs=29.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|+ +|.++..+++.+ ..+.+|+.++.+++.++.. +.+..
T Consensus 13 ~~k~vlITGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 60 (266)
T 1xq1_A 13 KAKTVLVTGG-TKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK 60 (266)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 4567777665 555666555543 2345799999888777666 55543
No 457
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=56.92 E-value=16 Score=27.74 Aligned_cols=40 Identities=25% Similarity=0.417 Sum_probs=30.2
Q ss_pred CCCEEEEEcCC-CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 78 PGAKVLDVGSG-SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 78 ~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++.+|+=+|+| .|..+..++...+ ++|+++|.+++.++.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG--a~V~v~D~~~~~l~~~ 223 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG--AKTTGYDVRPEVAEQV 223 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT--CEEEEECSSGGGHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHH
Confidence 56899999998 4555555566653 4799999999877776
No 458
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=56.86 E-value=47 Score=23.17 Aligned_cols=45 Identities=16% Similarity=0.054 Sum_probs=29.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
.++++|=.|++. .++..+++.+ ..+.+|+.++.+++..+.+ ..+.
T Consensus 26 ~~k~~lVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 72 (277)
T 4fc7_A 26 RDKVAFITGGGS-GIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLA 72 (277)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 567888888654 4455555443 3455899999998877666 5543
No 459
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=56.68 E-value=33 Score=23.80 Aligned_cols=46 Identities=15% Similarity=0.164 Sum_probs=30.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|++.| +...+++.+ ..+.+|+.++.+++.++.+ +.+..
T Consensus 19 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~ 66 (266)
T 4egf_A 19 DGKRALITGATKG-IGADIARAFAAAGARLVLSGRDVSELDAARRALGE 66 (266)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 4667887776554 444444443 2345799999998888777 66544
No 460
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=56.45 E-value=48 Score=23.16 Aligned_cols=45 Identities=11% Similarity=0.187 Sum_probs=29.2
Q ss_pred CCEEEEEcCCCChHHHHHHHHhC-CCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMVG-KNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
++++|=.|+ +|.++..+++.+. .+.+|+.++.+++.++.. +.+..
T Consensus 44 ~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~ 90 (285)
T 2c07_A 44 NKVALVTGA-GRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS 90 (285)
T ss_dssp SCEEEEEST-TSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh
Confidence 467887775 4666666666553 345788888887766665 55543
No 461
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=56.45 E-value=29 Score=26.13 Aligned_cols=37 Identities=24% Similarity=0.419 Sum_probs=27.1
Q ss_pred EEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 81 KVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 81 ~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
+|.=||+ |+.+..++..+....+|+++|.+++.++..
T Consensus 2 kI~VIG~--G~vG~~~A~~La~G~~V~~~d~~~~~~~~l 38 (402)
T 1dlj_A 2 KIAVAGS--GYVGLSLGVLLSLQNEVTIVDILPSKVDKI 38 (402)
T ss_dssp EEEEECC--SHHHHHHHHHHTTTSEEEEECSCHHHHHHH
T ss_pred EEEEECC--CHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 4556665 777777776664444799999999888776
No 462
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=56.35 E-value=38 Score=22.11 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=28.5
Q ss_pred EEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 81 KVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 81 ~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++|=.| |+|.++..+++.+... +|++++.+++..+..
T Consensus 2 ~vlVtG-asg~iG~~la~~l~~~-~V~~~~r~~~~~~~~ 38 (207)
T 2yut_A 2 RVLITG-ATGGLGGAFARALKGH-DLLLSGRRAGALAEL 38 (207)
T ss_dssp EEEEET-TTSHHHHHHHHHTTTS-EEEEECSCHHHHHHH
T ss_pred EEEEEc-CCcHHHHHHHHHHHhC-CEEEEECCHHHHHHH
Confidence 466666 5788888888887666 899999998776655
No 463
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=56.12 E-value=43 Score=23.44 Aligned_cols=45 Identities=9% Similarity=0.156 Sum_probs=28.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
.++++|=.|+ +|.++..+++.+ ..+.+|+.++.+++.++.. +.+.
T Consensus 25 ~~k~vlITGa-sggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~ 71 (302)
T 1w6u_A 25 QGKVAFITGG-GTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQIS 71 (302)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 3567777775 455555555543 2345788899888777665 5443
No 464
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=55.90 E-value=38 Score=23.53 Aligned_cols=47 Identities=17% Similarity=0.164 Sum_probs=27.2
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcC-CHHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEH-IPEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~-s~~~i~~a-~~~~~~ 125 (140)
.++++|=.|++.| ++..+++.+ ..+.+|+.++. +++..+.. +.+...
T Consensus 28 ~~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~ 77 (271)
T 4iin_A 28 TGKNVLITGASKG-IGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK 77 (271)
T ss_dssp SCCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc
Confidence 4667887776654 444444433 33457888887 55555555 544443
No 465
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=55.68 E-value=38 Score=23.25 Aligned_cols=45 Identities=7% Similarity=0.071 Sum_probs=28.2
Q ss_pred CCEEEEEcCCCChHHHHHHHHhC----CCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMVG----KNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~~----~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
++++|=.|++ |.++..+++.+. .+.+|+.++.+++.++.. +.+..
T Consensus 6 ~k~~lVTGas-~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~ 55 (259)
T 1oaa_A 6 CAVCVLTGAS-RGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGA 55 (259)
T ss_dssp SEEEEESSCS-SHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CcEEEEeCCC-ChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHh
Confidence 4566666654 555555555443 356788888888777666 55543
No 466
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=55.54 E-value=19 Score=25.39 Aligned_cols=47 Identities=17% Similarity=0.171 Sum_probs=30.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
.++++|=.|++. .++..+++.+ ..+.+|+.++.+++..+.+ +.+...
T Consensus 32 ~gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~ 80 (275)
T 4imr_A 32 RGRTALVTGSSR-GIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS 80 (275)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc
Confidence 567888888654 4444554443 3345799999988777766 655443
No 467
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=55.08 E-value=50 Score=22.95 Aligned_cols=47 Identities=15% Similarity=0.257 Sum_probs=28.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcC-------------CHHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEH-------------IPEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~-------------s~~~i~~a-~~~~~~ 125 (140)
.++++|=.|++.|. +..+++.+ ..+.+|+.+|. +++.++.. +.+...
T Consensus 10 ~~k~~lVTGas~GI-G~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (277)
T 3tsc_A 10 EGRVAFITGAARGQ-GRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA 71 (277)
T ss_dssp TTCEEEEESTTSHH-HHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCccHH-HHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc
Confidence 46788888866554 44444433 33457999987 56666666 555443
No 468
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=55.03 E-value=23 Score=26.49 Aligned_cols=40 Identities=15% Similarity=0.144 Sum_probs=27.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhC-CCCeEEEEcCCHHHHHHH
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVG-KNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~i~~a 119 (140)
++++|+=+|+ |..+..+++... .+.+|+++|.+++.++.+
T Consensus 167 ~g~~V~ViG~--G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~ 207 (377)
T 2vhw_A 167 EPADVVVIGA--GTAGYNAARIANGMGATVTVLDINIDKLRQL 207 (377)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence 5789999998 455444443321 234799999999887776
No 469
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=54.77 E-value=14 Score=28.43 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
-++|--||+ |+.+..++..+....+|+++|++++.++..
T Consensus 36 ~mkIaVIGl--G~mG~~lA~~La~G~~V~~~D~~~~~v~~l 74 (432)
T 3pid_A 36 FMKITISGT--GYVGLSNGVLIAQNHEVVALDIVQAKVDML 74 (432)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHTTSEEEEECSCHHHHHHH
T ss_pred CCEEEEECc--CHHHHHHHHHHHcCCeEEEEecCHHHhhHH
Confidence 357777775 565555555443445799999999998877
No 470
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=54.71 E-value=46 Score=22.36 Aligned_cols=44 Identities=5% Similarity=-0.030 Sum_probs=28.4
Q ss_pred CCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.+ +.+.
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 47 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALARDGYALALGARSVDRLEKIAHELM 47 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 4567777754 45555555544 2345799999998887777 5554
No 471
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=53.64 E-value=26 Score=25.01 Aligned_cols=47 Identities=15% Similarity=0.172 Sum_probs=30.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~~ 125 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.. +.+...
T Consensus 40 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~ 88 (293)
T 3rih_A 40 SARSVLVTGGT-KGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL 88 (293)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh
Confidence 45677777755 44455554443 2345799999988877776 665544
No 472
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=53.60 E-value=40 Score=23.90 Aligned_cols=46 Identities=15% Similarity=0.163 Sum_probs=30.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|+ +|.++..+++.+ ..+.+|+.++.+++.++.. +.+..
T Consensus 25 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~ 72 (297)
T 1xhl_A 25 SGKSVIITGS-SNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILK 72 (297)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 4567887775 455555555544 2345799999998877766 65544
No 473
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=53.49 E-value=55 Score=22.92 Aligned_cols=47 Identities=13% Similarity=0.085 Sum_probs=28.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcC-CHHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEH-IPEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~-s~~~i~~a-~~~~~~ 125 (140)
.++++|=.|++.| ++..+++.+ ..+.+|+.++. +++.++.. +.+...
T Consensus 28 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~ 77 (280)
T 4da9_A 28 ARPVAIVTGGRRG-IGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL 77 (280)
T ss_dssp CCCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEecCCCH-HHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc
Confidence 4667888886554 444444433 23457988885 77666666 555544
No 474
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=53.34 E-value=18 Score=27.40 Aligned_cols=40 Identities=30% Similarity=0.506 Sum_probs=29.1
Q ss_pred CCCEEEEEcCC-CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 78 PGAKVLDVGSG-SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 78 ~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++.+|+=+|+| .|..+..++...+ .+|+++|.++...+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG--AIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCGGGHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHH
Confidence 47899999987 3444555555553 4799999998877666
No 475
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=53.29 E-value=23 Score=26.00 Aligned_cols=42 Identities=29% Similarity=0.168 Sum_probs=28.4
Q ss_pred CCEEEEEcCCCCh--HHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchh
Q psy7827 79 GAKVLDVGSGSGY--LTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVT 123 (140)
Q Consensus 79 ~~~vLDiGcG~G~--~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~ 123 (140)
..+|--||+|+=. ++..++..+ ..|+-+|++++.++.+ +++.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G---~~V~l~D~~~~~l~~~~~~i~ 50 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGG---FRVKLYDIEPRQITGALENIR 50 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT---CCEEEECSCHHHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCC---CeEEEEECCHHHHHHHHHHHH
Confidence 4588899988433 233334443 3599999999998887 6654
No 476
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=52.93 E-value=8.2 Score=26.14 Aligned_cols=37 Identities=19% Similarity=0.166 Sum_probs=26.3
Q ss_pred EEEEEcCCCChHHHHHHHHhC-CCCeEEEEcCCHHHHHHH
Q psy7827 81 KVLDVGSGSGYLTTCFAHMVG-KNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 81 ~vLDiGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~i~~a 119 (140)
+|+=+|+ |.++..+++... .+..|+.+|.+++.++..
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l 39 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEF 39 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHH
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 4556664 777777776552 234699999999988765
No 477
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=52.66 E-value=47 Score=23.78 Aligned_cols=34 Identities=15% Similarity=0.245 Sum_probs=21.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHI 112 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s 112 (140)
.++++|=.|++.|. +..+++.+ ..+.+|+.+|.+
T Consensus 45 ~gk~~lVTGas~GI-G~aia~~la~~G~~Vv~~~~~ 79 (317)
T 3oec_A 45 QGKVAFITGAARGQ-GRTHAVRLAQDGADIVAIDLC 79 (317)
T ss_dssp TTCEEEESSCSSHH-HHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCcHH-HHHHHHHHHHCCCeEEEEecc
Confidence 46788888866554 44444433 334579998876
No 478
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=52.63 E-value=52 Score=22.62 Aligned_cols=44 Identities=20% Similarity=0.166 Sum_probs=27.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hch
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++..+.+ +.+
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l 51 (267)
T 2gdz_A 6 NGKVALVTGAA-QGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAAL 51 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 45678888854 55555555443 2345799999888766655 444
No 479
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=52.63 E-value=2.9 Score=39.14 Aligned_cols=48 Identities=19% Similarity=0.346 Sum_probs=36.9
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCC----CCeEEEEcCCHHHHHHH-hchhh
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGK----NGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~----~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.+..+|||||.|+|..+..+.+.... ..+++..|+|+.+.+.| ++++.
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~ 1291 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQ 1291 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHH
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhh
Confidence 35679999999999988777766542 23588889999988888 77654
No 480
>2vl7_A XPD; helicase, unknown function; 2.25A {Sulfolobus tokodaii}
Probab=52.54 E-value=63 Score=25.23 Aligned_cols=61 Identities=15% Similarity=0.088 Sum_probs=41.9
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcCC
Q psy7827 64 QHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLHY 127 (140)
Q Consensus 64 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~~ 127 (140)
+...+...+. .....+++.+||+|-...++........+++-+-...+..++. +.+...++
T Consensus 15 ~~~~v~~~~~---~~~~~~~~a~TGtGKT~~~l~~~~~~~~~~~~~~~t~~l~~q~~~~~~~l~~ 76 (540)
T 2vl7_A 15 KLGEAINALK---HGKTLLLNAKPGLGKTVFVEVLGMQLKKKVLIFTRTHSQLDSIYKNAKLLGL 76 (540)
T ss_dssp HHHHHHHHHH---TTCEEEEECCTTSCHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHGGGTC
T ss_pred HHHHHHHHHH---cCCCEEEEcCCCCcHHHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHHHhcCC
Confidence 3444444443 3456789999999998877766543345688888888888888 77766543
No 481
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=51.64 E-value=55 Score=22.39 Aligned_cols=44 Identities=14% Similarity=0.081 Sum_probs=25.7
Q ss_pred CEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 80 AKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 80 ~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
+++|=.|++ |.++..+++.+ ..+.+|+.++.+++..+.. +.+..
T Consensus 3 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 48 (256)
T 1geg_A 3 KVALVTGAG-QGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ 48 (256)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 456666644 44555554443 2344688888887766655 55443
No 482
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=51.61 E-value=36 Score=24.79 Aligned_cols=44 Identities=9% Similarity=0.138 Sum_probs=32.1
Q ss_pred CEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hchhhcC
Q psy7827 80 AKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SNVTTLH 126 (140)
Q Consensus 80 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~~~~~~ 126 (140)
..|+++|||-=.....+.. ....+++=|| .|..++.. +.+...+
T Consensus 104 ~QvV~LGaGlDTra~Rl~~--~~~~~v~evD-~P~vi~~k~~lL~~~~ 148 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDW--PTGTTVYEID-QPKVLAYKSTTLAEHG 148 (310)
T ss_dssp CEEEEETCTTCCHHHHSCC--CTTCEEEEEE-CHHHHHHHHHHHHHTT
T ss_pred CeEEEeCCCCCchhhhccC--CCCcEEEEcC-CHHHHHHHHHHHHhcC
Confidence 5799999998887555431 2235799999 69999888 7776543
No 483
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=51.52 E-value=49 Score=22.66 Aligned_cols=46 Identities=17% Similarity=0.195 Sum_probs=27.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhC-CCCeEEEEcC-CHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVG-KNGSVVGVEH-IPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~-~~~~v~gvD~-s~~~i~~a-~~~~~ 124 (140)
.++++|=.|+ +|.++..+++.+. .+.+|+.++. +++..+.. +.+..
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~ 68 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK 68 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh
Confidence 3567776664 5666666655442 3346888887 66666555 54443
No 484
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=51.44 E-value=19 Score=25.73 Aligned_cols=37 Identities=24% Similarity=0.324 Sum_probs=25.3
Q ss_pred CEEEEEcCCC-Ch-HHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 80 AKVLDVGSGS-GY-LTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 80 ~~vLDiGcG~-G~-~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++|.=||+|. |. ++..+++.. .+|+.+|.+++.++.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G---~~V~~~d~~~~~~~~~ 54 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATG---HTVVLVDQTEDILAKS 54 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEECCHHHHHHH
Confidence 5788999874 22 333344432 3699999999988876
No 485
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=51.41 E-value=34 Score=23.51 Aligned_cols=46 Identities=13% Similarity=0.092 Sum_probs=29.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|++. .++..+++.+ ..+.+|+.++.+++.++.+ +.+..
T Consensus 11 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 58 (252)
T 3f1l_A 11 NDRIILVTGASD-GIGREAAMTYARYGATVILLGRNEEKLRQVASHINE 58 (252)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 466788888654 4444444443 2345799999998887776 65543
No 486
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=51.41 E-value=47 Score=22.65 Aligned_cols=46 Identities=13% Similarity=0.152 Sum_probs=28.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++..+.. +.+..
T Consensus 6 ~~k~vlITGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 53 (264)
T 2pd6_A 6 RSALALVTGAG-SGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGG 53 (264)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC--
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh
Confidence 45678877754 55555555543 2345799999998877766 55543
No 487
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=51.26 E-value=33 Score=24.16 Aligned_cols=46 Identities=22% Similarity=0.281 Sum_probs=29.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hchhh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNVTT 124 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~~~ 124 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.+ +.+..
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~ 79 (281)
T 4dry_A 32 EGRIALVTGGG-TGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGG 79 (281)
T ss_dssp --CEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence 46778877755 45555555543 3355799999999888777 65543
No 488
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=51.22 E-value=28 Score=25.00 Aligned_cols=48 Identities=19% Similarity=0.111 Sum_probs=34.4
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 64 QHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 64 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
+...+.+.+. ....+.+|.-||+|..+..+. + .+++.-|++++.+..-
T Consensus 24 l~~~i~~~lp---~~~~~yvEpF~GggaV~~~~~----~-~~~i~ND~n~~Lin~y 71 (284)
T 2dpm_A 24 LLPVIRELIP---KTYNRYFEPFVGGGALFFDLA----P-KDAVINDFNAELINCY 71 (284)
T ss_dssp GHHHHHHHSC---SSCSCEEETTCTTCHHHHHHC----C-SEEEEEESCHHHHHHH
T ss_pred HHHHHHHHhc---cccCEEEeecCCccHHHHhhh----c-cceeeeecchHHHHHH
Confidence 3455555543 225689999999999987652 2 3699999999987644
No 489
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=50.75 E-value=48 Score=22.47 Aligned_cols=41 Identities=12% Similarity=0.144 Sum_probs=29.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
.++++|=.|+ +|.++..+++.+..+++|+.++.+++.++..
T Consensus 4 ~~k~vlITGa-s~gIG~~~a~~l~~g~~v~~~~r~~~~~~~~ 44 (245)
T 3e9n_A 4 KKKIAVVTGA-TGGMGIEIVKDLSRDHIVYALGRNPEHLAAL 44 (245)
T ss_dssp --CEEEEEST-TSHHHHHHHHHHTTTSEEEEEESCHHHHHHH
T ss_pred CCCEEEEEcC-CCHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 3567887775 5566677777666677899999998877655
No 490
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=50.17 E-value=61 Score=22.46 Aligned_cols=44 Identities=23% Similarity=0.114 Sum_probs=28.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hch
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.. +.+
T Consensus 20 ~~k~~lVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l 65 (267)
T 1vl8_A 20 RGRVALVTGGS-RGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKL 65 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45678877754 55555555543 2345799999988777666 554
No 491
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=49.67 E-value=50 Score=22.48 Aligned_cols=45 Identities=22% Similarity=0.156 Sum_probs=26.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcC-CHHHHHHH-hchh
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEH-IPEIVNHA-SNVT 123 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~-s~~~i~~a-~~~~ 123 (140)
.++++|=.|+ +|.++..+++.+ ..+.+|+.++. +++..+.. +.+.
T Consensus 6 ~~k~vlITGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~ 53 (261)
T 1gee_A 6 EGKVVVITGS-STGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIK 53 (261)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHH
Confidence 3567776664 455555555543 23456888887 66655555 4443
No 492
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=49.66 E-value=21 Score=25.27 Aligned_cols=40 Identities=18% Similarity=0.220 Sum_probs=26.4
Q ss_pred CEEEEEcCCCChHHHHHHHHhC-CCCeEEEEcCCHHHHHHH-hc
Q psy7827 80 AKVLDVGSGSGYLTTCFAHMVG-KNGSVVGVEHIPEIVNHA-SN 121 (140)
Q Consensus 80 ~~vLDiGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~i~~a-~~ 121 (140)
++|.=||+| ..+..++..+. .+.+|+.+|.+++.++.+ +.
T Consensus 5 ~kV~VIGaG--~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 46 (283)
T 4e12_A 5 TNVTVLGTG--VLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR 46 (283)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred CEEEEECCC--HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence 467778775 34444443321 233699999999998888 65
No 493
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=49.58 E-value=18 Score=27.00 Aligned_cols=40 Identities=25% Similarity=0.380 Sum_probs=29.0
Q ss_pred CCCEEEEEcCC-CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Q psy7827 78 PGAKVLDVGSG-SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 78 ~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a 119 (140)
++.+|+=+|+| .|..+..+++..+ .+|+.+|.++...+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG--AVVMATDVRAATKEQV 211 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHH
Confidence 57899999987 3444555555543 4799999998776666
No 494
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=49.29 E-value=57 Score=22.13 Aligned_cols=45 Identities=16% Similarity=0.122 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcC-CHHHHHHH-hchhh
Q psy7827 79 GAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEH-IPEIVNHA-SNVTT 124 (140)
Q Consensus 79 ~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~-s~~~i~~a-~~~~~ 124 (140)
++++|=.|++ |.++..+++.+ ..+.+|+.++. +++..+.. +.+..
T Consensus 4 ~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~ 51 (246)
T 2uvd_A 4 GKVALVTGAS-RGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKK 51 (246)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh
Confidence 4566666644 45555554433 23346887777 66666555 44433
No 495
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=49.17 E-value=62 Score=22.29 Aligned_cols=47 Identities=13% Similarity=0.029 Sum_probs=26.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEE-cCCHHHHHHH-hchhhc
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGV-EHIPEIVNHA-SNVTTL 125 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gv-D~s~~~i~~a-~~~~~~ 125 (140)
.++++|=-|++ |.++..+++.+ ..+.+|+.+ +.+++..+.. +.+...
T Consensus 3 ~~k~vlVTGas-~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~ 52 (258)
T 3oid_A 3 QNKCALVTGSS-RGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL 52 (258)
T ss_dssp CCCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT
T ss_pred CCCEEEEecCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc
Confidence 35567766654 44455554443 234467765 7777776666 555443
No 496
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=48.96 E-value=56 Score=21.96 Aligned_cols=44 Identities=16% Similarity=0.163 Sum_probs=26.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hch
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
.++++|=.|+ +|.++..+++.+ ..+.+|+.++.+++..+.. +.+
T Consensus 6 ~~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 51 (248)
T 2pnf_A 6 QGKVSLVTGS-TRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEI 51 (248)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Confidence 3556776665 455555555543 2345788888887766655 444
No 497
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=48.72 E-value=12 Score=28.75 Aligned_cols=41 Identities=27% Similarity=0.374 Sum_probs=25.0
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHhCC-CCeEEEEcCCHHHHHHH
Q psy7827 77 VPGAKVLDVGSGSGYLTTCFAHMVGK-NGSVVGVEHIPEIVNHA 119 (140)
Q Consensus 77 ~~~~~vLDiGcG~G~~~~~la~~~~~-~~~v~gvD~s~~~i~~a 119 (140)
..++++--||+| +.+..++..+.. +-+|+++|++++.++..
T Consensus 9 ~~~~~~~ViGlG--yvGlp~A~~La~~G~~V~~~D~~~~kv~~L 50 (431)
T 3ojo_A 9 HHGSKLTVVGLG--YIGLPTSIMFAKHGVDVLGVDINQQTIDKL 50 (431)
T ss_dssp ---CEEEEECCS--TTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred ccCCccEEEeeC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 456777777766 333333333222 23699999999999887
No 498
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=48.67 E-value=65 Score=22.36 Aligned_cols=34 Identities=15% Similarity=0.238 Sum_probs=21.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCC
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHI 112 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s 112 (140)
.++++|=.|++.| ++..+++.+ ..+.+|+.+|.+
T Consensus 9 ~~k~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 9 EGKTALITGGARG-MGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeCC
Confidence 4678888886654 444444433 234578888876
No 499
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=48.14 E-value=56 Score=22.57 Aligned_cols=44 Identities=11% Similarity=0.094 Sum_probs=27.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHh-CCCCeEEEEcCCHHHHHHH-hch
Q psy7827 78 PGAKVLDVGSGSGYLTTCFAHMV-GKNGSVVGVEHIPEIVNHA-SNV 122 (140)
Q Consensus 78 ~~~~vLDiGcG~G~~~~~la~~~-~~~~~v~gvD~s~~~i~~a-~~~ 122 (140)
.++++|=.|++ |.++..+++.+ ..+.+|+.++.+++.++.. +.+
T Consensus 5 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 50 (278)
T 1spx_A 5 AEKVAIITGSS-NGIGRATAVLFAREGAKVTITGRHAERLEETRQQI 50 (278)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 35677777754 55555555443 2345799999888777666 554
No 500
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=48.10 E-value=34 Score=25.27 Aligned_cols=41 Identities=20% Similarity=0.100 Sum_probs=28.0
Q ss_pred CCEEEEEcCC-CChHHHHHHHHhCCCCeEEEEcCCHHHHHHH-hc
Q psy7827 79 GAKVLDVGSG-SGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA-SN 121 (140)
Q Consensus 79 ~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~i~~a-~~ 121 (140)
+.+|+=+|+| .|..+..++... +++|+++|.+++..+.+ +.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~ 209 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETL 209 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHh
Confidence 4899999985 233333444443 34799999999888777 44
Done!