RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7827
(140 letters)
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 224
Score = 80.3 bits (197), Expect = 4e-20
Identities = 49/109 (44%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 20 IKSPRVIDAMIHIDRGHFCAHNDSRKYMLAARDIGYGSIIDNPVQHAEVLELLKDKLVPG 79
IK+ +V + M+ DR H+ YM + + IG+ + I P HA LELL D+L G
Sbjct: 21 IKTDKVFEVMLATDRSHYA---KCNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEG 77
Query: 80 AKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHASNVTTLHYP 128
AK LDVGSGSG LT CFA MVG G V+G++HI E+V+ + N P
Sbjct: 78 AKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDP 126
>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 223
Score = 67.9 bits (165), Expect = 2e-15
Identities = 46/113 (40%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 12 DYIVEIDSIKSPRVIDAMIHIDRGHFCAHNDSRKYMLAARDIGYGSIIDNPVQHAEVLEL 71
+ + I S V AM DR H+ YM A + IG G I P HA LE
Sbjct: 17 RQLKDHGVIASDAVAQAMKETDRKHYS---PRNPYMDAPQPIGGGVTISAPHMHAFALEY 73
Query: 72 LKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNG-----SVVGVEHIPEIVNHA 119
L+D L PGA++LDVGSGSGYLT CF + G +VG+EH E+V +
Sbjct: 74 LRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRS 126
>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Sulfolobus tokodaii [TaxId: 111955]}
Length = 224
Score = 52.5 bits (125), Expect = 8e-10
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 20 IKSPRVIDAMIHIDRGHFC-AHNDSRKYMLAARDIGYGSIIDNPVQHAEVLELLKDKLVP 78
IK+ + +A +DR F + Y + I+ + + L + L
Sbjct: 11 IKTQELAEAFNKVDRSLFLPENLKDYAYAHTHEALPILPGINTTALNLGIFMLDELDLHK 70
Query: 79 GAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119
G KVL++G+G GY T A +V K V VE ++ N+A
Sbjct: 71 GQKVLEIGTGIGYYTALIAEIVDKV---VSVEINEKMYNYA 108
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 48.6 bits (115), Expect = 3e-08
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119
P +L ++ + PG VL+ GSGSG ++ + VG G V+ E + + A
Sbjct: 84 PKDINMILSMMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLA 139
>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 215
Score = 46.8 bits (110), Expect = 9e-08
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 20 IKSPRVIDAMIHIDRGHFC-AHNDSRKYMLAARDIGYGSIIDNPVQHAEVLELLKDKLVP 78
I+S V A + R ++ I G + P A +LE+ K P
Sbjct: 21 IRSKEVERAFLKYPRYLSVEDKYKKYAHIDEPLPIPAGQTVSAPHMVAIMLEIANLK--P 78
Query: 79 GAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNH 118
G +L+VG+GSG+ + +V V +E IPE+V
Sbjct: 79 GMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEF 116
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 264
Score = 46.9 bits (111), Expect = 1e-07
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 53 IGYGSIIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHI 112
+ G + P A+++ + PGA+VL+ G+GSG LT VG G V+ E
Sbjct: 73 MPRGPQVIYPKDAAQIVHEGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQR 130
Query: 113 PEIVNHASNVTTLHYPKLNKRIKFIC 138
+ HA + Y + + +
Sbjct: 131 ADHAEHARRNVSGCYGQPPDNWRLVV 156
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 250
Score = 44.7 bits (105), Expect = 6e-07
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 71 LLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119
+++ L PG +L+VG GSG +++ + + G++ VE + + A
Sbjct: 78 IMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKA 126
>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl
O-methyltransferase {Thermotoga maritima [TaxId: 2336]}
Length = 213
Score = 41.1 bits (95), Expect = 9e-06
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Query: 22 SPRVIDAMIHIDRGHFCAHNDSRKY------MLAARDIGYGSIIDNPVQHAEVLELLKDK 75
S + A + I R F + Y +++ D S P A +E +
Sbjct: 15 SDHIAKAFLEIPREEFLTKSYPLSYVYEDIVLVSYDDGEEYSTSSQPSLMALFMEWVGLD 74
Query: 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNH 118
G +VL++G G+GY + +VG+ G VV VE+ +I
Sbjct: 75 --KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEI 115
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus
cereus [TaxId: 1396]}
Length = 281
Score = 41.0 bits (95), Expect = 1e-05
Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 12/76 (15%)
Query: 46 YMLAARDIGYGSIIDNPVQHAEVLELLKD---KLVPGAKVLDVGSGSGYLTTCFAHMVGK 102
Y+ RD+ Y + + L + K+ ++D G G GYL ++ +
Sbjct: 1 YLKNTRDLYYND---------DYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPE 51
Query: 103 NGSVVGVEHIPEIVNH 118
G++ ++
Sbjct: 52 GSKYTGIDSGETLLAE 67
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus
halodurans [TaxId: 86665]}
Length = 231
Score = 40.8 bits (94), Expect = 2e-05
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNH 118
A+++++ K +VLDV +G G++ FA V K VV + +I+
Sbjct: 5 AKLMQIAALK--GNEEVLDVATGGGHVANAFAPFVKK---VVAFDLTEDILKV 52
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli
[TaxId: 562]}
Length = 245
Score = 39.6 bits (91), Expect = 4e-05
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 59 IDNPVQHAEVLELLKD-KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEH 111
I NP + L + ++ PG ++LD+GSGSG + +A G + G++
Sbjct: 13 IHNPFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHG--ITGTGIDM 64
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis
[TaxId: 1423]}
Length = 234
Score = 39.2 bits (90), Expect = 5e-05
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 65 HAEVLELLKDK--LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNH 118
H L L+ +VLD+G+G+G+ F+ V + +GV+ E+V
Sbjct: 1 HHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQE---CIGVDATKEMVEV 53
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga
maritima [TaxId: 2336]}
Length = 266
Score = 36.6 bits (84), Expect = 4e-04
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 59 IDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNH 118
I P + + +L + G +++D G GSG + A VG +G V E E
Sbjct: 86 IVYPKDSSFIAMMLD--VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKL 143
Query: 119 A 119
A
Sbjct: 144 A 144
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 406
Score = 36.6 bits (84), Expect = 5e-04
Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 5/65 (7%)
Query: 55 YGSIIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPE 114
YG + P ++V + + K G +D+GSG G A G G E + +
Sbjct: 197 YGEL--LPNFLSDVYQQCQLK--KGDTFMDLGSGVGNCVVQAALECGC-ALSFGCEIMDD 251
Query: 115 IVNHA 119
+
Sbjct: 252 ASDLT 256
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus
fulgidus [TaxId: 2234]}
Length = 209
Score = 36.2 bits (83), Expect = 5e-04
Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHASNV 122
A +L+ + KL +VL +G+ SG T + G + VE+ + +
Sbjct: 44 AMILKGHRLKLRGDERVLYLGAASGT-TVSHLADIVDEGIIYAVEYSAKPFEKLLEL 99
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT)
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 186
Score = 36.0 bits (82), Expect = 6e-04
Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 7/73 (9%)
Query: 66 AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHASNVTTL 125
++ L + +DVG G+G +T A V + V ++ PE ++ L
Sbjct: 23 CLIMCLAEPG--KNDVAVDVGCGTGGVTLELAGRVRR---VYAIDRNPEAISTTEM--NL 75
Query: 126 HYPKLNKRIKFIC 138
L + +
Sbjct: 76 QRHGLGDNVTLME 88
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus
horikoshii [TaxId: 53953]}
Length = 227
Score = 35.1 bits (80), Expect = 0.001
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHASNV 122
+ PG VL +G SG + + +VG G + G+E P ++ +
Sbjct: 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPI 117
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 280
Score = 35.0 bits (79), Expect = 0.002
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 15/80 (18%)
Query: 54 GYGSIIDNPVQHAEVLELLKDKLV----------PGAKVLDVGSGSGYLT-----TCFAH 98
+ +++ +H + E + KL K+L +G G+G + A
Sbjct: 6 SFRRFLNHSTEHQCMQEFMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQ 65
Query: 99 MVGKNGSVVGVEHIPEIVNH 118
G + VE E +
Sbjct: 66 YPGVCINNEVVEPSAEQIAK 85
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase
{Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Length = 252
Score = 34.5 bits (78), Expect = 0.002
Identities = 15/68 (22%), Positives = 23/68 (33%), Gaps = 4/68 (5%)
Query: 71 LLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHASNVTTLHYPKL 130
L++ G VLD+G G G + G GV+ +N A K
Sbjct: 17 LIRLYTKRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARV--RARNMKR 72
Query: 131 NKRIKFIC 138
++ F
Sbjct: 73 RFKVFFRA 80
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia
coli [TaxId: 562]}
Length = 268
Score = 34.5 bits (78), Expect = 0.002
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Query: 45 KYMLAARDIGYGSIIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNG 104
M+ AR + P++ A V +L + VLD+G G GY T FA
Sbjct: 51 AEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADA-LPEI 109
Query: 105 SVVGVEH 111
+ G++
Sbjct: 110 TTFGLDV 116
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 246
Score = 34.2 bits (77), Expect = 0.002
Identities = 9/52 (17%), Positives = 17/52 (32%)
Query: 52 DIGYGSIIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKN 103
D + +D ++E + + LD+ G+G LT
Sbjct: 11 DKLIRADVDYKKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNT 62
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB
{Salmonella typhimurium [TaxId: 90371]}
Length = 198
Score = 34.2 bits (77), Expect = 0.003
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHM 99
H++VL K +V + LD+G G+G + A
Sbjct: 19 HSDVLAAAK--VVAPGRTLDLGCGNGRNSLYLAAN 51
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus
jannaschii [TaxId: 2190]}
Length = 230
Score = 33.6 bits (76), Expect = 0.005
Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 76 LVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHASN 121
+ +K+L +G+ +G T + G V +E+ P I+ +
Sbjct: 72 IKRDSKILYLGASAGT-TPSHVADIADKGIVYAIEYAPRIMRELLD 116
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas
syringae [TaxId: 317]}
Length = 201
Score = 33.1 bits (74), Expect = 0.006
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Query: 75 KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119
+VPGA+VL G + + + VVG E V
Sbjct: 17 NVVPGARVLVPLCGKSQDMSWLSG---QGYHVVGAELSEAAVERY 58
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Human (Homo sapiens) [TaxId:
9606]}
Length = 328
Score = 33.3 bits (75), Expect = 0.006
Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Query: 64 QHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHASN 121
A++++ +K + +D+GSG G + GVE +A
Sbjct: 139 LVAQMIDEIK--MTDDDLFVDLGSGVGQV-VLQVAAATNCKHHYGVEKADIPAKYAET 193
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia
carotovora [TaxId: 554]}
Length = 225
Score = 33.0 bits (74), Expect = 0.007
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 59 IDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNH 118
D V H ++ PG +L++GS G T+ + VE E ++H
Sbjct: 2 FDFDVMHPFMVRAFTPFFRPG-NLLELGSFKGDFTSRLQE---HFNDITCVEASEEAISH 57
Query: 119 ASNVTTLHYPKLNKRIKFICEY 140
A ++ R +
Sbjct: 58 AQGRLKDGITYIHSRFEDAQLP 79
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase
3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 33.0 bits (74), Expect = 0.009
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 75 KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHASNV 122
+ VLDVG G+G L+ A K V+GV+ + +
Sbjct: 32 HIFKDKVVLDVGCGTGILSMFAAKAGAK--KVLGVDQSEILYQAMDII 77
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 316
Score = 32.8 bits (74), Expect = 0.010
Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Query: 75 KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHASN 121
L VLDVGSG+G L A + V+G+E
Sbjct: 30 HLFKDKVVLDVGSGTGILCMFAAKAGAR--KVIGIECSSISDYAVKI 74
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 292
Score = 32.6 bits (73), Expect = 0.011
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 68 VLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119
+L LL+ +VLDV G+G + + SV V+ +++ +A
Sbjct: 48 LLGLLRQH--GCHRVLDVACGTGVDSIMLVE---EGFSVTSVDASDKMLKYA 94
>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 229
Score = 31.9 bits (71), Expect = 0.015
Identities = 14/59 (23%), Positives = 19/59 (32%), Gaps = 5/59 (8%)
Query: 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119
+ + + LK K G +V G FA SVVGVE +
Sbjct: 30 HQLLKKHLDTFLKGK--SGLRVFFPLCGKAVEMKWFADR---GHSVVGVEISELGIQEF 83
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO)
{Haemophilus influenzae [TaxId: 727]}
Length = 225
Score = 32.0 bits (71), Expect = 0.015
Identities = 9/56 (16%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVG-KNGSVVGVEHIPEIVNHA 119
+ L + + + V D+G G T + N ++G+++ +V
Sbjct: 26 ITAIGMLAERFVTADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERC 81
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 328
Score = 31.4 bits (70), Expect = 0.025
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 75 KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVE 110
L VLDVG G+G L+ A K V+GV+
Sbjct: 35 DLFKDKIVLDVGCGTGILSMFAAKHGAK--HVIGVD 68
>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase
domain {Thermotoga maritima [TaxId: 2336]}
Length = 192
Score = 30.9 bits (69), Expect = 0.031
Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Query: 62 PVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNH 118
PV EV+E LK + +LD G G + ++G++ E++
Sbjct: 9 PVMVREVIEFLKPE--DEKIILDCTVGEGGHSRAILEHC-PGCRIIGIDVDSEVLRI 62
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 229
Score = 31.2 bits (69), Expect = 0.033
Identities = 7/42 (16%), Positives = 12/42 (28%), Gaps = 2/42 (4%)
Query: 78 PGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119
G +VL+VG G + +E +
Sbjct: 53 KGGRVLEVGFGMAIAASKVQEA--PIDEHWIIECNDGVFQRL 92
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain
{Thermus aquaticus [TaxId: 271]}
Length = 223
Score = 30.1 bits (66), Expect = 0.065
Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Query: 68 VLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHASNVTTLHY 127
++ L + G +VL+ G F G VGVE P+ ++ +
Sbjct: 11 MVSLAEAP--RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWAEGILA 68
Query: 128 PKLNKRIKFICEY 140
L +
Sbjct: 69 DFLLWEPGEAFDL 81
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 309
Score = 30.1 bits (67), Expect = 0.078
Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Query: 79 GAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHASNVTTLHYPKLNKRIKFIC 138
KVL++ +G + A G V V+ + + A + I++IC
Sbjct: 133 PLKVLNLFGYTGVA-SLVAAAAGA--EVTHVDASKKAIGWAKE-NQVLAGLEQAPIRWIC 188
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389
{Thermotoga maritima [TaxId: 2336]}
Length = 246
Score = 29.7 bits (65), Expect = 0.11
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 65 HAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHM 99
H + L++ L +VLD+G G+G +
Sbjct: 29 HRLIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQER 63
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538
{Streptococcus pyogenes [TaxId: 1314]}
Length = 152
Score = 29.1 bits (64), Expect = 0.13
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 77 VPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVG 108
G +VLD+ +GSG L +V
Sbjct: 13 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVE 44
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase,
INMT {Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 29.3 bits (64), Expect = 0.15
Identities = 7/81 (8%), Positives = 18/81 (22%), Gaps = 5/81 (6%)
Query: 42 DSRKYMLAARDIGYGSIIDNPVQH---AEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAH 98
R Y+ + + + + + G ++D+GSG
Sbjct: 12 LPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQ--VLA 69
Query: 99 MVGKNGSVVGVEHIPEIVNHA 119
+ +
Sbjct: 70 ACDSFQDITLSDFTDRNREEL 90
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 251
Score = 28.9 bits (63), Expect = 0.16
Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 2/91 (2%)
Query: 52 DIGYGSIIDNPVQHAEVLE--LLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGV 109
D Y I+ + +E +D +VLD+ G+G T A + +
Sbjct: 13 DTIYRRRIERVKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDLH 72
Query: 110 EHIPEIVNHASNVTTLHYPKLNKRIKFICEY 140
E + + + L L + I
Sbjct: 73 EEMLRVARRKAKERNLKIEFLQGDVLEIAFK 103
>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine
N-methyltransferase, PNMTase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 263
Score = 29.0 bits (64), Expect = 0.18
Identities = 11/86 (12%), Positives = 23/86 (26%), Gaps = 14/86 (16%)
Query: 42 DSRKYMLAARDIGYGSIIDNPVQHAEVL--------ELLKDKLVPGAKVLDVGSGSGYLT 93
+ R Y+ Y + V + V G ++D+GSG
Sbjct: 14 EPRAYL----RNNYAPPRGDLCNPNGVGPWKLRCLAQTFATGEVSGRTLIDIGSGPTVYQ 69
Query: 94 TCFAHMVGKNGSVVGVEHIPEIVNHA 119
A ++ + + +
Sbjct: 70 LLSACSHFED--ITMTDFLEVNRQEL 93
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 278
Score = 28.7 bits (63), Expect = 0.22
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 11/62 (17%)
Query: 57 SIIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIV 116
II++ + A + P VL+VG G+G +T ++ K VV E P +V
Sbjct: 8 LIINSIIDKAALR--------PTDVVLEVGPGTGNMT---VKLLEKAKKVVACELDPRLV 56
Query: 117 NH 118
Sbjct: 57 AE 58
>d1ccwb_ c.1.19.2 (B:) Glutamate mutase, large subunit {Clostridium
cochlearium [TaxId: 1494]}
Length = 483
Score = 28.6 bits (64), Expect = 0.26
Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 10/78 (12%)
Query: 13 YIVEIDSIKSPRVIDAMIH-IDRG----HFCAHNDSRKYMLAARD----IGYGSIIDNPV 63
+ ++ + + + + G F + M+ RD + Y + P
Sbjct: 379 ILDKMFELGKGDLAIGTVKAFETGVMDIPFGPSKYNAGKMMPVRDNLGCVRYLEFGNVPF 438
Query: 64 QHAEVLELLKDKLVPGAK 81
E+ +++L AK
Sbjct: 439 TE-EIKNYNRERLQERAK 455
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria
monocytogenes [TaxId: 1639]}
Length = 328
Score = 28.4 bits (62), Expect = 0.29
Identities = 9/77 (11%), Positives = 24/77 (31%), Gaps = 6/77 (7%)
Query: 68 VLELLKDKLVPGAKVLDVGSGSG----YLTTCFAHMVGKNGSVVGVEHIPEIVNHASNVT 123
+ ++++ K +LD G+ + + GV+ +++ A
Sbjct: 109 LEKVIQKK--KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGA 166
Query: 124 TLHYPKLNKRIKFICEY 140
L K+ +
Sbjct: 167 DLQRQKMTLLHQDGLAN 183
>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine
methyltransferase {Red algae (Galdieria sulphuraria)
[TaxId: 130081]}
Length = 282
Score = 28.2 bits (61), Expect = 0.34
Identities = 12/54 (22%), Positives = 17/54 (31%), Gaps = 4/54 (7%)
Query: 67 EVLELLKD--KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNH 118
+ L L AK LD+G+G G G S+ + P
Sbjct: 54 WLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKR 105
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus
pneumoniae, Ermam [TaxId: 1313]}
Length = 245
Score = 26.8 bits (58), Expect = 0.80
Identities = 8/46 (17%), Positives = 20/46 (43%), Gaps = 8/46 (17%)
Query: 57 SIIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGK 102
+++ ++ + V ++G+G G+LTT A + +
Sbjct: 16 KVLNQIIKQLNLK--------ETDTVYEIGTGKGHLTTKLAKISKQ 53
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase
TM1293 {Thermotoga maritima [TaxId: 2336]}
Length = 208
Score = 27.0 bits (58), Expect = 0.81
Identities = 7/40 (17%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 61 NPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMV 100
+ + L+ +K L+P + +++G G+G +
Sbjct: 20 HRFAYLSELQAVK-CLLPEGRGVEIGVGTGRFAVPLKIKI 58
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 197
Score = 26.2 bits (57), Expect = 1.1
Identities = 9/43 (20%), Positives = 22/43 (51%)
Query: 68 VLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVE 110
++E+ D + G V+D G+G+G L + ++ + ++
Sbjct: 38 LIEIYNDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDID 80
>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 260
Score = 26.7 bits (58), Expect = 1.2
Identities = 19/115 (16%), Positives = 36/115 (31%), Gaps = 9/115 (7%)
Query: 24 RVIDAMIHIDRGHFCAHNDSRKYMLAARDIGYGSIIDNPVQHAEVLELLKDKLVPGAKVL 83
R D + H ++ S N + + ++ K P V+
Sbjct: 58 RKPDYELLYGSDTVTVHVENGIKYKLDVAKIMFSP-ANVKERVRMAKVAK----PDELVV 112
Query: 84 DVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHASNVTTLHYPKLNKRIKFIC 138
D+ +G G+L+ A V+ +E P L+ K+ R+
Sbjct: 113 DMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLN--KVEDRMSAYN 163
>d1x9la_ b.2.10.1 (A:) Hypothetical protein DR1885 {Deinococcus
radiodurans [TaxId: 1299]}
Length = 149
Score = 26.1 bits (57), Expect = 1.3
Identities = 13/83 (15%), Positives = 23/83 (27%), Gaps = 8/83 (9%)
Query: 3 GYKIFMVPTDYIVEIDSIKSPRVIDAMIH---IDRGHFCAHNDSRKYMLAARDIGYGSII 59
Y +D +++ +P M+ G + A G++
Sbjct: 47 AYMTLTNKSDQPIKLVGAATPLATSPMLMTTTHSGGMAGMKMVPWLTIPAR-----GTLT 101
Query: 60 DNPVQHAEVLELLKDKLVPGAKV 82
+L LK L G V
Sbjct: 102 LQRDGDHVMLMGLKRPLKVGETV 124
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 322
Score = 26.2 bits (57), Expect = 1.4
Identities = 9/62 (14%), Positives = 20/62 (32%), Gaps = 3/62 (4%)
Query: 57 SIIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIV 116
++ + ++ + K KVLD+ G G + F + +E +
Sbjct: 24 TVYNKIFDKLDLTK--TYKHPEELKVLDLYPGVGIQSAIFYNK-YCPRQYSLLEKRSSLY 80
Query: 117 NH 118
Sbjct: 81 KF 82
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein
KsgA {Escherichia coli [TaxId: 562]}
Length = 252
Score = 26.0 bits (56), Expect = 1.5
Identities = 9/55 (16%), Positives = 19/55 (34%), Gaps = 11/55 (20%)
Query: 57 SIIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEH 111
+ID+ V G ++++G G LT + + + +E
Sbjct: 8 FVIDSIVSAINPQ--------KGQAMVEIGPGLAALT---EPVGERLDQLTVIEL 51
>d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM
{Methylobacillus flagellatus [TaxId: 405]}
Length = 395
Score = 26.1 bits (57), Expect = 1.6
Identities = 10/65 (15%), Positives = 18/65 (27%), Gaps = 2/65 (3%)
Query: 75 KLVPGAKVLDVGSGSGYLTTCFA-HMVGKNGSVVGVEHIPEIVNH-ASNVTTLHYPKLNK 132
+ K++D G+ G GK V +E + + +
Sbjct: 209 RFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFAS 268
Query: 133 RIKFI 137
RI
Sbjct: 269 RITVH 273
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis,
Ermc' [TaxId: 1423]}
Length = 235
Score = 26.0 bits (56), Expect = 1.8
Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Query: 75 KLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNH 118
+L + ++GSG G+ T +V + V +E ++
Sbjct: 18 RLNEHDNIFEIGSGKGHFT---LELVQRCNFVTAIEIDHKLCKT 58
>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase
TrmB {Streptococcus pneumoniae [TaxId: 1313]}
Length = 204
Score = 25.6 bits (55), Expect = 2.4
Identities = 8/38 (21%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 82 VLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIVNHA 119
++VGSG G + A + + +G++ ++++A
Sbjct: 35 HVEVGSGKGAFVSGMAKQ-NPDINYIGIDIQKSVLSYA 71
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa
(LmjF30.0810) {Leishmania major [TaxId: 5664]}
Length = 254
Score = 25.3 bits (54), Expect = 3.0
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 3/87 (3%)
Query: 54 GYGSIIDNPVQHAEVLELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIP 113
G + D ++ + + ++ LD G+G G +T + +E +
Sbjct: 70 GMDHVHDVDIEGSRNF-IASLPGHGTSRALDCGAGIGRITKNLLTKLYAT--TDLLEPVK 126
Query: 114 EIVNHASNVTTLHYPKLNKRIKFICEY 140
++ A
Sbjct: 127 HMLEEAKRELAGMPVGKFILASMETAT 153
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 226
Score = 25.1 bits (53), Expect = 3.4
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 70 ELLKDKLVPGAKVLDVGSGSGYLTTCFAHM 99
LL + KVLD+ G G +
Sbjct: 29 PLLMKYMKKRGKVLDLACGVGGFSFLLEDY 58
>d2p41a1 c.66.1.25 (A:8-264) An RNA cap
(nucleoside-2'-O-)-methyltransferase domain of RNA
polymerase NS5 {Dengue virus 2 [TaxId: 11060]}
Length = 257
Score = 24.9 bits (54), Expect = 3.8
Identities = 4/34 (11%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 8 MVPTDYIVEIDSIKSPRVIDAMIHIDR--GHFCA 39
+ + +++ ++ RV++ + + FC
Sbjct: 140 IGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCV 173
>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase
TrmB {Bacillus subtilis [TaxId: 1423]}
Length = 204
Score = 24.5 bits (52), Expect = 4.9
Identities = 11/65 (16%), Positives = 24/65 (36%), Gaps = 5/65 (7%)
Query: 58 IIDNPVQHAEVL-ELLKDKLVPGAKVLDVGSGSGYLTTCFAHMVGKNGSVVGVEHIPEIV 116
I NP + + + ++VG+G G + A + + +G+E ++
Sbjct: 11 AISNPADYKGKWNTVFGND---NPIHIEVGTGKGQFISGMAKQ-NPDINYIGIELFKSVI 66
Query: 117 NHASN 121
A
Sbjct: 67 VTAVQ 71
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum
vulgare), 1,3-beta-glucanase [TaxId: 4513]}
Length = 306
Score = 24.2 bits (52), Expect = 6.4
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 53 IGYGSIIDNPVQHAEVLELLKDKLVPGAKVLDV 85
+ YG I +N ++V++L + K + G ++
Sbjct: 3 VCYGVIGNNLPSRSDVVQLYRSKGINGMRIYFA 35
>d1j99a_ c.37.1.5 (A:) Hydroxysteroid sulfotransferase sult2a1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 24.0 bits (51), Expect = 7.5
Identities = 6/50 (12%), Positives = 16/50 (32%)
Query: 4 YKIFMVPTDYIVEIDSIKSPRVIDAMIHIDRGHFCAHNDSRKYMLAARDI 53
++ + +SPR+ + + I + K + R+
Sbjct: 73 RSPWVESEIGYTALSETESPRLFSSHLPIQLFPKSFFSSKAKVIYLMRNP 122
>d2oqoa1 d.2.1.10 (A:57-243) Penicillin-binding protein 1a, PBP1a
{Aquifex aeolicus [TaxId: 63363]}
Length = 187
Score = 23.8 bits (51), Expect = 8.4
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 13 YIVEIDSIKSPRVIDAMIHIDRGHFCAHN 41
+ V ID I VI+A + + +F H
Sbjct: 8 FYVSIDKI-PEHVINAFVATEDRNFWHHF 35
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.140 0.423
Gapped
Lambda K H
0.267 0.0563 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 549,451
Number of extensions: 24422
Number of successful extensions: 176
Number of sequences better than 10.0: 1
Number of HSP's gapped: 173
Number of HSP's successfully gapped: 80
Length of query: 140
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 63
Effective length of database: 1,350,386
Effective search space: 85074318
Effective search space used: 85074318
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (22.6 bits)