Query psy7828
Match_columns 503
No_of_seqs 211 out of 1221
Neff 6.5
Searched_HMMs 46136
Date Fri Aug 16 19:55:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7828.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7828hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2058|consensus 100.0 1.2E-43 2.6E-48 370.4 26.4 320 114-494 51-386 (436)
2 smart00164 TBC Domain in Tre-2 100.0 2.7E-33 5.9E-38 267.1 18.4 190 230-454 1-197 (199)
3 COG5210 GTPase-activating prot 100.0 2.7E-31 5.8E-36 287.9 20.6 234 223-491 202-443 (496)
4 KOG4567|consensus 100.0 4.4E-30 9.6E-35 253.4 18.1 279 206-497 4-351 (370)
5 KOG1092|consensus 100.0 2.6E-30 5.7E-35 263.4 13.5 234 223-494 178-456 (484)
6 PF00566 RabGAP-TBC: Rab-GTPas 100.0 3.7E-29 8.1E-34 239.8 16.5 202 236-475 1-214 (214)
7 KOG2223|consensus 99.9 9.1E-27 2E-31 237.5 15.8 239 223-499 291-547 (586)
8 KOG2222|consensus 99.9 6.9E-27 1.5E-31 240.0 14.2 235 223-493 159-403 (848)
9 KOG1093|consensus 99.9 1.3E-25 2.9E-30 235.7 17.5 244 211-496 331-580 (725)
10 KOG4347|consensus 99.9 3.8E-25 8.2E-30 235.8 17.1 229 223-489 192-423 (671)
11 KOG4436|consensus 99.9 8.2E-22 1.8E-26 213.3 18.9 233 223-491 567-807 (948)
12 KOG1102|consensus 99.9 7.1E-22 1.5E-26 208.2 13.8 237 220-496 132-373 (397)
13 KOG2224|consensus 99.8 1.8E-18 3.8E-23 176.8 12.4 236 225-477 426-698 (781)
14 KOG2221|consensus 99.7 3.4E-17 7.4E-22 155.3 4.7 174 223-430 93-267 (267)
15 KOG2197|consensus 99.7 1.9E-16 4.1E-21 170.5 10.1 218 228-477 172-410 (488)
16 KOG3636|consensus 99.6 4.1E-15 9E-20 153.1 14.1 216 233-492 36-253 (669)
17 KOG2595|consensus 99.6 1.5E-14 3.2E-19 145.2 16.1 234 222-492 47-285 (395)
18 KOG1091|consensus 99.5 2.5E-13 5.5E-18 143.8 15.0 179 275-487 106-342 (625)
19 KOG4436|consensus 99.4 4.4E-12 9.5E-17 138.6 12.2 239 223-488 174-418 (948)
20 KOG2801|consensus 97.8 0.00022 4.7E-09 71.4 11.0 232 223-495 32-281 (559)
21 PF14961 BROMI: Broad-minded p 97.3 0.0017 3.7E-08 75.6 12.2 142 347-489 1101-1258(1296)
22 KOG2224|consensus 94.8 0.0083 1.8E-07 63.0 0.0 46 332-379 527-572 (781)
23 KOG1648|consensus 89.9 0.047 1E-06 58.5 -2.2 193 213-452 535-743 (813)
24 PF10597 U5_2-snRNA_bdg: U5-sn 59.2 53 0.0011 29.8 7.7 97 15-142 14-115 (135)
25 PF10777 YlaC: Inner membrane 45.7 27 0.00058 32.3 3.8 33 12-45 108-140 (155)
26 KOG2197|consensus 43.2 17 0.00036 40.1 2.5 30 224-253 68-97 (488)
27 TIGR03595 Obg_CgtA_exten Obg f 42.0 42 0.00091 26.8 4.0 37 17-53 16-52 (69)
28 PF10163 EnY2: Transcription f 39.3 54 0.0012 27.3 4.4 41 20-62 8-48 (86)
29 PF09269 DUF1967: Domain of un 32.4 45 0.00098 26.6 2.8 36 18-53 17-52 (69)
30 KOG1047|consensus 29.1 6.8E+02 0.015 28.3 11.8 51 11-62 402-453 (613)
31 COG0191 Fba Fructose/tagatose 22.5 1.5E+02 0.0032 30.5 5.0 80 14-95 194-280 (286)
No 1
>KOG2058|consensus
Probab=100.00 E-value=1.2e-43 Score=370.42 Aligned_cols=320 Identities=19% Similarity=0.259 Sum_probs=251.2
Q ss_pred hhhhhhhhcccccCCCcccccccCchhHHHHHHhhcCCCCcCCCCCCCCcccccccCCCChHHHHHHHHHHhccCCcccc
Q psy7828 114 DMKDKWTELSTYEVDLTQYRPVYAPKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGT 193 (503)
Q Consensus 114 ~~~~kw~e~~~~~~d~~~~~~~y~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lr~~y~~l~~~~~~~g~ 193 (503)
.+.++|+|.-... |+.+-++.++ .-+.++++..+.. .....+.|++-+..-..+ ..++-+.++.......
T Consensus 51 ~~~~~~~e~~~~~-~~~~~~~~~~---~~e~l~a~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~k~~s~~~~~~~---- 120 (436)
T KOG2058|consen 51 TLGNKYEESKEDL-KLVQKVISWA---IRELLQAIEDLMS-KNNGFDQYSLQKLIGLPP-SDGYLKWLSSYLAYEE---- 120 (436)
T ss_pred ccccchhccccch-hcccccchhh---hhhhhhhhhhhhh-ccCcccccchhhcccCCc-chhhhHHHHHhhhhhh----
Confidence 4678888776666 6666677777 4444556666665 233457888876665444 4444455544433221
Q ss_pred cCCCCCCcchhhhHHHHHHHHHHHhcC-----------CChHHHHhhhhcCCCcchHHHHHHHhhCCCCCCCChHHHHHH
Q psy7828 194 NSYNNPNPYFNALESERITLGEKVLNS-----------KHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQL 262 (503)
Q Consensus 194 ~d~~~~~~~~~~~~~er~~~~~~vl~~-----------~~~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~~~~~~Ye~L 262 (503)
.|...++..+.. ..++++++++|+|||+++||.||..++|.......+++|+.|
T Consensus 121 ---------------r~~~~~~l~~~~~~~~~~~~~~~~~s~elk~liRkGiP~~~R~~VW~~~~g~~~~~~~~~~yq~l 185 (436)
T KOG2058|consen 121 ---------------RRQLRWELELQSNIKLHSPNDFPPRSDELKRLIRKGIPPELRGEVWWVLSGARRQLNYPGYYQEL 185 (436)
T ss_pred ---------------hHHHHHHHHhhhhhcccccccccCCcHHHHHHHHcCCChhhhhHHHHHHhcchhhccCchhHHHH
Confidence 111112222222 227899999999999999999999999944333337899999
Q ss_pred HHcccccchHHHHHhhhccCCcCCCCCCCch-----hhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccc
Q psy7828 263 KSSVLTYDLLIDKLTIKDVQLTASNDDQYFV-----FEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENL 337 (503)
Q Consensus 263 ~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf~-----f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~ 337 (503)
.+..........++|+.|+.||||++..+|. +.+.+++||.||++.+
T Consensus 186 l~~~~~~~~~~~~qI~~DL~RTfP~n~~~~~~~~~~~~~~LrRvL~Aya~hN---------------------------- 237 (436)
T KOG2058|consen 186 LRKGDEKKSPVVKQIKLDLPRTFPDNFKGFDSEDSDGRQTLRRVLLAYARHN---------------------------- 237 (436)
T ss_pred HhcCCCccchHHHHHHhccccccCCCcccCCCCCchHHHHHHHHHHHHHhhC----------------------------
Confidence 8876655545667999999999998844443 2457899999998754
Q ss_pred cccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHh
Q psy7828 338 VVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKT 417 (503)
Q Consensus 338 ~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~ 417 (503)
|..| ||||||.+||++|+++++||+|||||+.++++|+++ |+.+.-.|.+..+.+|+.||+..+|+|+.||+.
T Consensus 238 ---p~vG--YCQGmNflAallLL~~~~EE~AFW~Lv~iie~~lp~--Yyt~nL~g~qvDQ~VL~~llre~lPkl~~~l~~ 310 (436)
T KOG2058|consen 238 ---PSVG--YCQGMNFLAALLLLLMPSEEDAFWMLVALIENYLPR--YYTPNLIGSQVDQKVLRELLREKLPKLSLHLEG 310 (436)
T ss_pred ---CCCc--chhhHHHHHHHHHHhcCChHHHHHHHHHHHHHhchh--hcCchhhhhhccHHHHHHHHHHHCHHHHHhhhh
Confidence 2235 899999999999999999999999999999999997 555455799999999999999999999999999
Q ss_pred cCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCchHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhcccCCC
Q psy7828 418 IHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRY 494 (503)
Q Consensus 418 ~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls~~~ 494 (503)
++++..+++++||+|+|++.+|.+++|||||++|+ +|.+++|++|+|+++..+++|+++++..++.++|+++..-.
T Consensus 311 ~~~~~~l~t~~wfLt~f~d~lP~~t~LrIwD~~f~-eGskvlfr~Alai~k~~ee~il~~~~~~~i~~~~~~~~~~~ 386 (436)
T KOG2058|consen 311 NGVDASLETLPWFLTLFVDILPSETVLRIWDCLFY-EGSKVLFRVALAILKKHEEEILKEDSSKEILRVLPDLTKRS 386 (436)
T ss_pred cCCCeeeeehhhhHHHhcccccHHHHHHHHHHHHh-cccHHHHHHHHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999 77899999999999999999999999999999998776543
No 2
>smart00164 TBC Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs. Widespread domain present in Gyp6 and Gyp7, thereby giving rise to the notion that it performs a GTP-activator activity on Rab-like GTPases.
Probab=100.00 E-value=2.7e-33 Score=267.10 Aligned_cols=190 Identities=22% Similarity=0.438 Sum_probs=158.8
Q ss_pred hhcCCCcchHHHHHHHhhCCCCCCC--ChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCc----hhhHHHHHHHH
Q psy7828 230 LKKGSPRCLRGKIWCQVLGSEATPD--NSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYF----VFEDLLYQILL 303 (503)
Q Consensus 230 ~r~GIP~~lR~~VW~~LLg~~~~~~--~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf----~f~d~l~qvl~ 303 (503)
.++|||+++|+.+|+.++|+..... ....|+++++.....+....++|.+||+||++++..|. +.++.+.+|+.
T Consensus 1 ~~~Gip~~~R~~vW~~ll~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~~~I~~Dv~Rt~~~~~~f~~~~~~~~~~L~~IL~ 80 (199)
T smart00164 1 VRKGVPPSLRGVVWKLLLNAQPMDTSADKDLYSRLLKETAPKDKSIVHQIEKDLRRTFPEHSFFQDKEGPGQESLRRVLK 80 (199)
T ss_pred CCCCCCHHHHHHHHHHHhCCchhhhcccchHHHHHHHhhcCCChhhHHHHhcccCCCCCCchhhcCCCcccHHHHHHHHH
Confidence 3789999999999999999998743 36899999887554443345799999999998765442 35667777777
Q ss_pred hhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHHhhccc
Q psy7828 304 CFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHL 383 (503)
Q Consensus 304 afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~~~~~l 383 (503)
||+.. .|..| |+|||+.+||++++++.+|++|||||.++++++.+
T Consensus 81 ~~~~~-------------------------------~p~~g--Y~QGm~~i~~~ll~~~~~e~~af~~~~~l~~~~~~-- 125 (199)
T smart00164 81 AYALY-------------------------------NPEVG--YCQGMNFLAAPLLLVMPDEEDAFWCLVKLMERYGP-- 125 (199)
T ss_pred HHHHH-------------------------------CCCCc--eeccHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCc--
Confidence 77542 23335 88999999999999988899999999999999854
Q ss_pred CCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHh-cCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcC
Q psy7828 384 HQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKT-IHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYD 454 (503)
Q Consensus 384 ~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~-~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~ 454 (503)
.++....+|+...+.+|+.++++++|+|++||++ .|+.+..|+++||+|+|++++|++.++||||.|+.+|
T Consensus 126 ~~~~~~~~~~~~~~~~~~~ll~~~~p~l~~~l~~~~~i~~~~~~~~W~~~lF~~~~~~~~~~riwD~~l~eG 197 (199)
T smart00164 126 NFYLPDMSGLQLDLLQLDRLVKEYDPDLYKHLKDKLGIDPSLYALRWFLTLFARELPLEIVLRIWDVLFAEG 197 (199)
T ss_pred ccCCCChHHHHHHHHHHHHHHHHHCHHHHHHHHHhcCCCchhHHHHHHHHHHHhhCCHHHHHHHHHHHHhcC
Confidence 4334344688899999999999999999999996 9999999999999999999999999999999999954
No 3
>COG5210 GTPase-activating protein [General function prediction only]
Probab=99.97 E-value=2.7e-31 Score=287.86 Aligned_cols=234 Identities=20% Similarity=0.362 Sum_probs=192.3
Q ss_pred hHHHHhhhhcCCCcchHHHHHHHhhCCCCCC-CChHHHHHHHHcccccch---HHHHHhhhccCCcCCCCCCCch--hhH
Q psy7828 223 APVAQEFLKKGSPRCLRGKIWCQVLGSEATP-DNSKYFEQLKSSVLTYDL---LIDKLTIKDVQLTASNDDQYFV--FED 296 (503)
Q Consensus 223 ~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~-~~~~~Ye~L~~~~~~~~~---~~d~lI~kDv~RT~~~d~~yf~--f~d 296 (503)
..+++.+++.|||+.+|+.+|..++|..... ...+.|+.+.+...++.. ....+|++|+.||++.+..|.- ...
T Consensus 202 ~~~~~~~i~~gip~~~r~~vw~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~Dl~rt~~~~~~f~~~~s~~ 281 (496)
T COG5210 202 LSKLRELIRKGIPNELRGDVWEFLLGIGFDLDKNPGLYERLLNLHREAKIPTQEIISQIEKDLSRTFPDNSLFQTEISIR 281 (496)
T ss_pred HHHHHHHHHhcCChHhhhhhHHHHhccchhhccCchHHHHHHHHHHhcCCCcHHHHHHHHccccccccccccccCccccc
Confidence 5679999999999999999999999998763 345677777664332222 2467999999999987665421 111
Q ss_pred --HHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHH
Q psy7828 297 --LLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRA 374 (503)
Q Consensus 297 --~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~ 374 (503)
.+.+|+.||+.. .|..| |+|||+.++|||++++.+|++|||||+.
T Consensus 282 ~~~L~rvL~ays~~-------------------------------~p~vg--Y~QgMn~l~a~ll~~~~~Ee~AF~~l~~ 328 (496)
T COG5210 282 AENLRRVLKAYSLY-------------------------------NPEVG--YVQGMNFLAAPLLLVLESEEQAFWCLVK 328 (496)
T ss_pred HHHHHHHHHHHHhc-------------------------------CCCCc--eeccHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 255555555432 24446 7899999999999999889999999999
Q ss_pred HHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcC
Q psy7828 375 FYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYD 454 (503)
Q Consensus 375 L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~ 454 (503)
|+++++....+..+ .+|+...+.+|+.+++..+|+||+||...|+...+|+++||+|+|++++|++.++||||++|. +
T Consensus 329 L~~~~~l~~~~~~~-~~G~~~~~~~l~~~v~~~~p~l~~hl~~~~~~~~~~~~~w~l~lF~~~~p~e~~lriwD~lf~-e 406 (496)
T COG5210 329 LLKNYGLPGYFLKN-LSGLHRDLKVLDDLVEELDPELYEHLLREGVVLLMFAFRWFLTLFVREFPLEYALRIWDCLFL-E 406 (496)
T ss_pred HHHhccchhhcccC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhhHHHHHHHHHhcCCHHHHHHHHHHHHH-h
Confidence 99966444445554 389999999999999999999999999999999999999999999999999999999999999 6
Q ss_pred CchHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhccc
Q psy7828 455 SLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILY 491 (503)
Q Consensus 455 ~~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls 491 (503)
|..+++.+++|++...+..++.+++...+..++.++.
T Consensus 407 g~~~l~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~ 443 (496)
T COG5210 407 GSSMLFQLALAILKLLRDKLLKLDSDELLDLLLKQLF 443 (496)
T ss_pred ccHHHHHHHHHHHHhhhhhhhccCchhHHHHHHHhhh
Confidence 6889999999999999999999998887777776553
No 4
>KOG4567|consensus
Probab=99.97 E-value=4.4e-30 Score=253.40 Aligned_cols=279 Identities=20% Similarity=0.299 Sum_probs=192.1
Q ss_pred hHHHHHHHHHHHhcCCC----hHHHHhhhhcCCC--cchHHHHHHHhhCCCCCCCC---------hHHHHHHHHccccc-
Q psy7828 206 LESERITLGEKVLNSKH----APVAQEFLKKGSP--RCLRGKIWCQVLGSEATPDN---------SKYFEQLKSSVLTY- 269 (503)
Q Consensus 206 ~~~er~~~~~~vl~~~~----~~~l~~l~r~GIP--~~lR~~VW~~LLg~~~~~~~---------~~~Ye~L~~~~~~~- 269 (503)
+-.+|++..+.+++..+ ..++++++..|+| .++|+.+|+++||+.+.... +..|.+...+....
T Consensus 4 ~~~~r~~~~edvl~~~~~~id~kelr~~~~~g~p~~~~lR~~~WkllL~Yl~~er~~w~s~La~~R~~Y~q~i~e~v~ep 83 (370)
T KOG4567|consen 4 LYKERIKSIEDVLNPADDTIDLKELRKLCFYGVPDDASLRPLVWKLLLGYLPPERSKWTSFLAKKRSLYKQFIEEIVDEP 83 (370)
T ss_pred hhhhhhhhHHHhhccccchhhHHHHHHHhhcCCCCccchhHhHHHHHHhhcChhhhhhHHHHHHHHHHHHHHHHHhccCc
Confidence 44567777888887766 4689999999999 69999999999999886432 35566555442100
Q ss_pred --ch-------------------------------HHHHHhhhccCCcCCCCCCCchhhHHHHHHHHhhc-c-chhhhhh
Q psy7828 270 --DL-------------------------------LIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFS-R-DTEILSI 314 (503)
Q Consensus 270 --~~-------------------------------~~d~lI~kDv~RT~~~d~~yf~f~d~l~qvl~afs-r-d~~vl~~ 314 (503)
.. ..-.+|++|+.||.| +..||.-.- .|. + .....+.
T Consensus 84 g~~~~~~~v~~~D~~~dhPls~~~~sdwn~ff~d~e~l~QIdrDvrr~~p-di~ff~~~~-------~~p~~~~~~~~~~ 155 (370)
T KOG4567|consen 84 GKKDNSKKVDSNDTDEDHPLSLGPTSDWNTFFKDCEVLLQIDRDVRRTHP-DISFFQLAS-------SYPCRQGMDSRRR 155 (370)
T ss_pred cccccccccccCcccccCCCCCCchhhHHHHhhhhHHHHHHHHHHHHhCc-chHhhhhcc-------ccccccchhhHhh
Confidence 00 011356666666632 222221100 000 0 0000000
Q ss_pred hhcc-CCCCCCccccc---cccccccccccCCCCCccccchHHHHHHHHHhccC----------hhHHHHHHHHHHHHhh
Q psy7828 315 FEHS-SASPLYGPLKN---KNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDD----------VISLYFTFRAFYLRYF 380 (503)
Q Consensus 315 i~~~-s~~~~~~~l~~---~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~d----------EedaFw~f~~L~~~~~ 380 (503)
+..+ .+-+.+..+.+ .+.+-.++.+.| |+-|+||||.|+||+.||+.+ |+|||+||++||...
T Consensus 156 i~~~q~~~~n~~gl~~~~~erilfiyAKLNp--Gi~YVQGMNEIlaPiYYVfa~Dpd~e~~~~aEaDaFFCF~~LMsei- 232 (370)
T KOG4567|consen 156 INASQEAGRNRLGLTRFAAERILFIYAKLNP--GIGYVQGMNEILAPIYYVFANDPDEENRAYAEADAFFCFTQLMSEI- 232 (370)
T ss_pred hhhhhHhhhcccchhhhHHHHHHHHHhhcCC--cchHHhhhHHHhhhhheeeccCCchhhHHhhhhhHHHHHHHHHHHH-
Confidence 1000 00000000000 000001123344 445999999999999999743 589999999999765
Q ss_pred cccCC---CCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcC-Cc
Q psy7828 381 YHLHQ---VSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYD-SL 456 (503)
Q Consensus 381 ~~l~~---~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~-~~ 456 (503)
+.+| +.+...||...+.-|..+|+++|-+||.||++.+|.|..|+|+|+.++++.+||++.++||||.+|+.. ..
T Consensus 233 -rDnf~k~LDdS~~GI~~~Msr~~~~lk~~D~EL~~~L~~~~i~PqfyaFRWitLLLsQEF~lpDvi~lWDsl~sD~~rf 311 (370)
T KOG4567|consen 233 -RDNFIKTLDDSVGGIHFLMSRLSELLKKHDEELWRHLEEKEIHPQFYAFRWITLLLSQEFPLPDVIRLWDSLLSDPQRF 311 (370)
T ss_pred -HHHHHHhccccccchHHHHHHHHHHHHHhhHHHHHHHHhcCCCccchhHHHHHHHHhccCCchhHHHHHHHHhcChhhh
Confidence 3333 333347999889999999999999999999999999999999999999999999999999999999932 57
Q ss_pred hHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhcccCCCCCC
Q psy7828 457 EIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRYIPA 497 (503)
Q Consensus 457 ~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls~~~~~~ 497 (503)
+++..+|+|++...|+.|++ .++..-+.+|++-|...+++
T Consensus 312 d~Ll~iCcsmlil~Re~il~-~DF~~nmkLLQ~yp~tdi~~ 351 (370)
T KOG4567|consen 312 DFLLYICCSMLILVRERILE-GDFTVNMKLLQNYPTTDISK 351 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cchHHHHHHHhcCCCCCHHH
Confidence 89999999999999999998 56899999999988887753
No 5
>KOG1092|consensus
Probab=99.97 E-value=2.6e-30 Score=263.35 Aligned_cols=234 Identities=18% Similarity=0.241 Sum_probs=183.3
Q ss_pred hHHHHhhhhcCCCcchHHHHHHHhhCCCCCCCC---------hHHHHHHHHccc------ccchHHHHHhhhccCCcCCC
Q psy7828 223 APVAQEFLKKGSPRCLRGKIWCQVLGSEATPDN---------SKYFEQLKSSVL------TYDLLIDKLTIKDVQLTASN 287 (503)
Q Consensus 223 ~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~~~---------~~~Ye~L~~~~~------~~~~~~d~lI~kDv~RT~~~ 287 (503)
..+++++++.|||..+|+.+|++++|+.+...+ ...|-.+..+.- ..+..+..+|.-|+.||-+
T Consensus 178 ~~~Lr~l~w~Gvp~~~Rp~~Wkll~gylp~n~~rr~~~l~~Kr~eY~~~v~~~~~~~~~~~~~~d~~rQI~id~prm~p- 256 (484)
T KOG1092|consen 178 LEKLRKLCWNGVPSKMRPIVWKLLSGYLPPNSDRREGTLQRKRKEYVDSVVQYFDSLTNGDEDQDTWRQIPIDIPRMNP- 256 (484)
T ss_pred HHHHHHHccCCCCccccCccceeeecccCcchhhhhhhHHHHHHHHHHHHHHHhccCCCccccCccccccccCCCCCCc-
Confidence 567999999999999999999999999886432 233444443311 1122345799999999943
Q ss_pred CCCCch---hhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhcc-
Q psy7828 288 DDQYFV---FEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYD- 363 (503)
Q Consensus 288 d~~yf~---f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~- 363 (503)
+...|+ .+..+.+|+.- | +..+|.+| |.||.++++.|++.++.
T Consensus 257 ~~~l~q~~~vq~~lerIl~i---------------------------w----airhpAsG--yvqgindlvtpf~vvfl~ 303 (484)
T KOG1092|consen 257 HIPLFQQKIVQEMLERILYI---------------------------W----AIRHPASG--YVQGINDLVTPFFVVFLS 303 (484)
T ss_pred cccchhhHHHHHHHHHHHHH---------------------------H----HHhccccc--ccccceeeechhhhhhhH
Confidence 332233 22223322211 1 12356677 77888888877764421
Q ss_pred ------------------------ChhHHHHHHHHHHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcC
Q psy7828 364 ------------------------DVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIH 419 (503)
Q Consensus 364 ------------------------dEedaFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~ 419 (503)
-|+|+|||+.+|++.. +.||+.. ++||++..+.++.|+++.|+.+++||+++|
T Consensus 304 e~l~~~~~~~~~d~~~l~~E~~~~iEADsyWClskLLD~I--QDNYtfa-QpGIq~kV~~L~eLv~RID~~~hkHlq~~g 380 (484)
T KOG1092|consen 304 EYLGPIMDVESIDMSLLPAENAEDIEADAYWCLSKLLDGI--QDNYTFA-QPGIQRKVKNLKELVQRIDEPLHKHLQEHG 380 (484)
T ss_pred hhcCccccccccchhhccHHHHhhhhhhHHHHHHHHHHHh--hhhhhhc-ChhHHHHHHHHHHHHHHhcHHHHHHHHHhc
Confidence 1489999999999998 7788875 489999999999999999999999999999
Q ss_pred CCcccchHHHHHHHhcCCCChhhHHHHHHHHHhc-CC-chHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhcccCCC
Q psy7828 420 IHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAY-DS-LEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRY 494 (503)
Q Consensus 420 i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~-~~-~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls~~~ 494 (503)
++..+|||+||.|+|.++||+.+++|+||.|++. +| .+++.+||+|+|...+++|++ +++++++.+|++|++..
T Consensus 381 veylQFAFRWmNcLLmRE~pl~~~iRlWDTY~aE~dgf~~FhvYvcAAFL~kW~~eL~e-~DFQ~~ilfLQnlPT~~ 456 (484)
T KOG1092|consen 381 VEYLQFAFRWMNCLLMREFPLRCTIRLWDTYLAEPDGFNEFHVYVCAAFLLKWSSELME-NDFQELILFLQNLPTHN 456 (484)
T ss_pred hHHHHHHHHHHHHHHHhhccchhHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999999999999995 33 479999999999999999994 78999999999998764
No 6
>PF00566 RabGAP-TBC: Rab-GTPase-TBC domain; InterPro: IPR000195 Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are GTPase activator proteins of yeast Ypt6 and Ypt7, imply that these domains are GTPase activator proteins of Rab-like small GTPases [].; GO: 0005097 Rab GTPase activator activity, 0032313 regulation of Rab GTPase activity, 0005622 intracellular; PDB: 2G77_A 1FKM_A 3HZJ_A 3QYE_A 2QFZ_A 3QYB_A 2QQ8_A 3DZX_A 3QWL_A.
Probab=99.96 E-value=3.7e-29 Score=239.76 Aligned_cols=202 Identities=27% Similarity=0.487 Sum_probs=150.3
Q ss_pred cchHHHHHHHhhCCCCC--------CCChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCc---hhhHHHHHHHHh
Q psy7828 236 RCLRGKIWCQVLGSEAT--------PDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYF---VFEDLLYQILLC 304 (503)
Q Consensus 236 ~~lR~~VW~~LLg~~~~--------~~~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf---~f~d~l~qvl~a 304 (503)
+++|+.+|+.++|..+. ......++.........+....++|.+|+.||++++ ..+ ..+..+.+|+.+
T Consensus 1 ~~~R~~vW~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~Dv~rt~~~~-~~~~~~~~~~~l~~iL~~ 79 (214)
T PF00566_consen 1 HSLRGQVWKILLGIEPNYSNNYQDEKNQWEQIESKSSNSNKLDNKIFEQIDKDVNRTFPNS-FLFKNEQNQKSLERILSA 79 (214)
T ss_dssp -CCHHHHHHHHCTCSCHHHHHHHHHHHHHHHHHHHHHHCTSTCHTCHHHHHHHHCTSSTSC-CCSTTHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHccchhhhhhHHHHhhhhhhhhHHHHHhccccchHHHHHHHhhhhhcccc-hhhhhcchHHHHHHHHHH
Confidence 46899999999999861 001111112222222333445689999999998733 222 234455565555
Q ss_pred hccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHHhhcccC
Q psy7828 305 FSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLH 384 (503)
Q Consensus 305 fsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~~~~~l~ 384 (503)
|+.. +|..| |+|||+.+++++++++.+|++|||||+.++...++ .
T Consensus 80 ~~~~-------------------------------~~~~~--Y~qG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~--~ 124 (214)
T PF00566_consen 80 YAKY-------------------------------NPDVG--YCQGMNDIAAPLLLVFLDEEEAFWCFVQLLNYYLP--D 124 (214)
T ss_dssp HHHH-------------------------------TTTTS--S-TTHHHHHHHHHHTCSHHHHHHHHHHHHHTHHGG--G
T ss_pred hccc-------------------------------ccccc--ccchhhhhhhhhhhhcccccchhccccchhccccc--c
Confidence 5432 22234 78999999999999999999999999999944443 3
Q ss_pred CCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCchH-HHHHH
Q psy7828 385 QVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEI-ISILA 463 (503)
Q Consensus 385 ~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~~i-l~~vA 463 (503)
+..+..+|+...+..++.+++.++|+|++||++.|+++..|+.+||+|+|++.+|.+.++|||| ++. +|.++ ++++|
T Consensus 125 ~~~~~~~~~~~~~~~~~~ll~~~~P~l~~~l~~~~~~~~~~~~~w~~~lF~~~l~~~~~~~lwD-~l~-~g~~~~l~~~~ 202 (214)
T PF00566_consen 125 FFQPNFKGLQKILKIFEQLLKKHDPELYNHLKQLGVDPEIYAFPWFLTLFSRSLPFDDVLRLWD-FLL-EGYKFFLFFIA 202 (214)
T ss_dssp GTSTTHHHHHHHHHHHHHHHHHHTHHHHHHHHHTT-GGHHHHHHHHHTTTTTTS-HHHHHHHHH-HHH-HCTTHHHHHHH
T ss_pred cccccccccchhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHhhcCCcCCHHHHHHHHH-HHH-cCCCcHHHHHH
Confidence 4443447888999999999999999999999999999999999999999999999999999999 666 44556 99999
Q ss_pred HHHHHHhHHHhh
Q psy7828 464 VAILSFRRENLM 475 (503)
Q Consensus 464 lAIL~~~~~~LL 475 (503)
+||++..|++||
T Consensus 203 lail~~~~~~il 214 (214)
T PF00566_consen 203 LAILKYLRDQIL 214 (214)
T ss_dssp HHHHHHTHHHHH
T ss_pred HHHHHHHHHHhC
Confidence 999999999987
No 7
>KOG2223|consensus
Probab=99.94 E-value=9.1e-27 Score=237.53 Aligned_cols=239 Identities=21% Similarity=0.324 Sum_probs=186.1
Q ss_pred hHHHHhhhhcCCCcchHHHHHHHhhCCCCCCCChHHHHHHHHccccc----------chHH-----HHHhhhccCCcCCC
Q psy7828 223 APVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTY----------DLLI-----DKLTIKDVQLTASN 287 (503)
Q Consensus 223 ~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~~~~~~Ye~L~~~~~~~----------~~~~-----d~lI~kDv~RT~~~ 287 (503)
+...+.+=|.|||+++||.||....|-..... .+.|+.+.....+. .... -.+|..|+.||||+
T Consensus 291 SrR~relWwQGiP~~VRGkvW~laIGNel~it-~elfd~~la~Aker~ak~~aeq~~~sa~~re~sv~~i~LDisrTfps 369 (586)
T KOG2223|consen 291 SRRVRELWWQGIPPSVRGKVWSLAIGNELNIT-YELFDIALARAKEREAKSLAEQMSNSAADREASVELIKLDISRTFPS 369 (586)
T ss_pred hHHHHHHHHccCChhhcchhhHhhhCcccccC-HHHHHHHHHHHHHHHHHHHHhhcccchhhhhcchhheeechhccCcc
Confidence 56688889999999999999999999876532 24455443321110 0111 15899999999986
Q ss_pred CCCCc---hhhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccC
Q psy7828 288 DDQYF---VFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDD 364 (503)
Q Consensus 288 d~~yf---~f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~d 364 (503)
-.-|. |++|.++.++.||+-. -|..| |+|||++|+|.|+ +-++
T Consensus 370 l~iFqk~GPy~d~L~~lL~AYt~y-------------------------------RpDvg--YVqgmSFIaAvLl-lnmd 415 (586)
T KOG2223|consen 370 LSIFQKGGPYHDDLHSLLGAYTCY-------------------------------RPDVG--YVQGMSFIAAVLL-LNMD 415 (586)
T ss_pred eeeeccCCchHHHHHHHhhhheee-------------------------------cCccc--cccchHHHHHHHH-HcCC
Confidence 44332 5778887766665421 13336 8899999988765 4577
Q ss_pred hhHHHHHHHHHHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHH
Q psy7828 365 VISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQIL 444 (503)
Q Consensus 365 EedaFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vL 444 (503)
+.+||-+|.+|+++-+..--|.-++ +.+......|+..+++.+|+|+.||+++++.|..|...|+.++|+-.+|++...
T Consensus 416 ~~~AFiafANLLdkp~q~Aff~~d~-s~m~~yf~tfe~~leenlp~L~~Hl~kl~l~PDiylidwiftlyskslpldlac 494 (586)
T KOG2223|consen 416 LADAFIAFANLLDKPCQQAFFRVDH-SSMLSYFATFEVFLEENLPKLFTHLKKLELTPDIYLIDWIFTLYSKSLPLDLAC 494 (586)
T ss_pred cHHHHHHHHHHhccHHHHHHHhcCc-HHHHHHHHHHHHHHHhccHHHHHHHHhccCCCchhhHHHHHHHHhccCChHHhh
Confidence 9999999999999864321222233 455667778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhcccCCCCCCCC
Q psy7828 445 YLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRYIPAPR 499 (503)
Q Consensus 445 rIWD~~l~~~~~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls~~~~~~~~ 499 (503)
||||+|+- +|.+++|+.|++||+.+++.|+.+ ++..+.++|-.++....|++.
T Consensus 495 RIwDvy~r-dgeeFlfr~~lgIlklyepkLl~m-Df~~~~qfLtklp~dL~~eel 547 (586)
T KOG2223|consen 495 RIWDVYCR-DGEEFLFRTALGILKLYEPKLLVM-DFIHVAQFLTKLPEDLTPEEL 547 (586)
T ss_pred hhhheeee-cchHHHHHHHHHHHHHccchHhhh-hHHHHHHHHHhCcccCCHHHH
Confidence 99999998 889999999999999999999985 588899999888876666543
No 8
>KOG2222|consensus
Probab=99.94 E-value=6.9e-27 Score=240.04 Aligned_cols=235 Identities=18% Similarity=0.295 Sum_probs=195.7
Q ss_pred hHHHHhhhhcC-CCcchHHHHHHHhhCCCCCCC-ChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCch----hhH
Q psy7828 223 APVAQEFLKKG-SPRCLRGKIWCQVLGSEATPD-NSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFV----FED 296 (503)
Q Consensus 223 ~~~l~~l~r~G-IP~~lR~~VW~~LLg~~~~~~-~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf~----f~d 296 (503)
..+++++++.| ||.++|+.+|..|+|+..+.+ ....|+...+.+.+...++.++|++|+-|+.||+.-|.. .-+
T Consensus 159 tdk~~~llkeggiphslr~~lw~rlsga~~kkk~ae~sy~~ilk~~andk~~~~~qiekdllr~lpnn~cf~k~n~~gi~ 238 (848)
T KOG2222|consen 159 TDKFEELLKEGGIPHSLRAFLWMRLSGALAKKKDAETSYEDILKACANDKLMIGKQIEKDLLRILPNNACFSKKNGEGIE 238 (848)
T ss_pred hHHHHHHHHcCCCCcchhHHHHHHhhhhhhhhccccccHHHHHHHhcccccchhHHHHHHHHHhCCCcceeeCCCCcchH
Confidence 56788888876 999999999999999987643 446788888888877788889999999999998754321 112
Q ss_pred HHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHH
Q psy7828 297 LLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFY 376 (503)
Q Consensus 297 ~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~ 376 (503)
.+++|+.|- +| +||..| |||||..|||.|++ |.+||.|||++.+++
T Consensus 239 ~lrrilk~i-------------------------a~------ifpdig--ycqg~gviva~lll-f~~ee~afwmmaaii 284 (848)
T KOG2222|consen 239 ALRRILKCI-------------------------AF------IFPDIG--YCQGMGVIVACLLL-FCEEENAFWMMAAII 284 (848)
T ss_pred HHHHHHhhh-------------------------ee------ecCCcc--cccCccHHHHHHHH-HhcchhHHHHHHHHH
Confidence 233322221 12 478778 99999999998654 567899999999999
Q ss_pred HHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCc
Q psy7828 377 LRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSL 456 (503)
Q Consensus 377 ~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~ 456 (503)
++.+|. +|++...-||++...+...|++.+.|.|-+.|++++|..++++..||+|+|.+.+-...++||||.||+.||
T Consensus 285 edilp~-nfysqtllgiqaderv~~~li~~~l~~ldeal~~~dielslitl~w~ltlf~nv~~~killriwd~~fy~g~- 362 (848)
T KOG2222|consen 285 EDILPA-NFYSQTLLGIQADERVMHHLIACHLPDLDEALEDHDIELSLITLHWFLTLFANVFHMKILLRIWDFFFYEGG- 362 (848)
T ss_pred HHhcCc-hhhhhhHhccchhHHHHHHHHHhccCchhHHHHhccceeeehHHHHHHHHHHHHHHHHHHHHHHHhheecCc-
Confidence 999887 666655579999999999999999999999999999999999999999999999999999999999998554
Q ss_pred hHHHHHHHHHHHHhHHHhhCC----CCHHHHHHHHhcccCC
Q psy7828 457 EIISILAVAILSFRRENLMQV----DTLQNVEVGYEILYGR 493 (503)
Q Consensus 457 ~il~~vAlAIL~~~~~~LL~~----~~~~~i~~~L~~ls~~ 493 (503)
-.+|.+.++||+..+.+|-.. .+.++|.+.|++||+-
T Consensus 363 i~ifql~i~ilkmkeqdi~~iaettensa~if~als~ip~~ 403 (848)
T KOG2222|consen 363 INIFQLIIGILKMKEQDIKEIAETTENSADIFNALSDIPAE 403 (848)
T ss_pred chhHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHhCCch
Confidence 577999999999999998866 7788899999988763
No 9
>KOG1093|consensus
Probab=99.93 E-value=1.3e-25 Score=235.71 Aligned_cols=244 Identities=21% Similarity=0.327 Sum_probs=192.7
Q ss_pred HHHHHHHhcCCC--hHHHHhhhhcCCCcchHHHHHHHhhCCCCCCCChHHHHHHHHcccccchHHHHHhhhccCCcCCCC
Q psy7828 211 ITLGEKVLNSKH--APVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASND 288 (503)
Q Consensus 211 ~~~~~~vl~~~~--~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~~~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d 288 (503)
..+..+++++.. ...+.+..+.|+|+.+|+.+|+.|||....+. ..|..+-+. .+..+|.+|+.||+|...-|
T Consensus 331 ~~~~d~Ll~g~~~k~~qI~r~a~vdvpp~~R~~iW~aLL~l~e~~~--a~y~~IDk~---Ts~~tdrqievdiprchQyd 405 (725)
T KOG1093|consen 331 MLLFDRLLDGYPKKRLQILREAYVDVPPLYRGFIWAALLQLEENHT--AFYTLIDKG---TSHSTDRQIEVDIPRCHQYD 405 (725)
T ss_pred HHHHHHhhccchHHHHHHHHHhccCCChhHhHHHHHHHhcCccccc--hhhhhhhcC---CCCcchhhhhcccchhhhcc
Confidence 445566666543 44577788899999999999999999987754 346655443 23456789999999984221
Q ss_pred CCCc---hhhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhc-cC
Q psy7828 289 DQYF---VFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLY-DD 364 (503)
Q Consensus 289 ~~yf---~f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~-~d 364 (503)
++- ..+..++++++|+.. | .| -++|.||+-.+++||+|+. ++
T Consensus 406 -~~lsSp~~~r~lrRvLkawv~------------------------~-------s~--~fvywqgldsLa~PFl~ln~Nn 451 (725)
T KOG1093|consen 406 -ELLSSPKGHRKLRRVLKAWVT------------------------W-------SP--IFVYWQGLDSLAAPFLYLNFNN 451 (725)
T ss_pred -cccCCHHHHHHHHHHHHHHHh------------------------c-------Cc--ceeecCCChhhhhhHHHHhcCc
Confidence 111 134455555555421 1 01 1247889999999999885 57
Q ss_pred hhHHHHHHHHHHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHH
Q psy7828 365 VISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQIL 444 (503)
Q Consensus 365 EedaFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vL 444 (503)
|.-||.|+.++.-+|+.. .|..+.+.-+...+.+|++++..|||+|++||..+|+.|.+||.+||+|+|+.+||.+.++
T Consensus 452 e~laF~~~~~fi~kycq~-fflkdns~vikeyLs~f~~l~AfhDpeL~qHl~~~~f~~eLyAiPwflT~Fshvlpl~kil 530 (725)
T KOG1093|consen 452 ELLAFACIATFIPKYCQH-FFLKDNSNVIKEYLSMFSQLLAFHDPELLQHLIDIGFIPELYAIPWFLTMFSHVLPLHKIL 530 (725)
T ss_pred hHHHHHHHHHHHHHHHHH-HHhhcCchhHHHHHHHHHHHHHhcCHHHHHHHHHcCCcHHHHHHHHHHHHHHhhccHHHHH
Confidence 899999999999998542 3444566667888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhcccCCCCC
Q psy7828 445 YLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRYIP 496 (503)
Q Consensus 445 rIWD~~l~~~~~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls~~~~~ 496 (503)
.+||.++. |+..+.+++++||+...|+.||.|+ +.|...+|++++.+.|+
T Consensus 531 ~LwD~lml-~~~SFplmi~vAil~~lR~~LLa~n-fne~illf~d~pdldId 580 (725)
T KOG1093|consen 531 HLWDNLML-GHSSFPLMIGVAILIQLRDPLLACN-FNECILLFSDLPDLDID 580 (725)
T ss_pred HHHHHHhc-CCCccHHHHHHHHHHHhhhhhhhCC-chhheeeeccCCcccHH
Confidence 99999999 7778999999999999999999975 88888999999987664
No 10
>KOG4347|consensus
Probab=99.93 E-value=3.8e-25 Score=235.85 Aligned_cols=229 Identities=16% Similarity=0.224 Sum_probs=191.8
Q ss_pred hHHHHhhhhcCCCcchHHHHHHHhhCCCCC-CCChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCc--hhhHHHH
Q psy7828 223 APVAQEFLKKGSPRCLRGKIWCQVLGSEAT-PDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYF--VFEDLLY 299 (503)
Q Consensus 223 ~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~-~~~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf--~f~d~l~ 299 (503)
..+++++++.|+|.+.|+++|....|+... -.+.++|+++.+.........-+-|++|++|..|.|+.|. +.-..+.
T Consensus 192 t~~~~Klv~~gipe~~rgeiW~l~sGav~~~l~~~Geygkll~~~~G~~~~a~eEIE~Dl~rsLpEhpA~Q~e~gi~aLR 271 (671)
T KOG4347|consen 192 TILLRKLLYNGFPEDPRGEIWYLASGAVASLLLNPGEYGKLLHSVTGKRSVATEEIEPDLGRSLPEHPAFQSEPGIAALR 271 (671)
T ss_pred HHHHHHHHHHhcCCChHHHHHHhhhHHHHHhhcCcHHhhhhhhcccCCcccccccccCCCCCCCCcchhhhCCCchhhHH
Confidence 568999999999999999999999999765 4567999999877554334444689999999998887753 2334566
Q ss_pred HHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHHh
Q psy7828 300 QILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRY 379 (503)
Q Consensus 300 qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~~ 379 (503)
+||.||+..+ |.-| |||-||-+++. ++++..||+|||+++++.++|
T Consensus 272 ~vL~Aya~~N-------------------------------p~vG--YcQaMNIV~s~-lll~~~EEeafwll~~lce~~ 317 (671)
T KOG4347|consen 272 RVLTAYAWSN-------------------------------PEVG--YCQAMNIVGSE-LLLFCKEEEAFWLLSKLCEIY 317 (671)
T ss_pred HHHHhhhccC-------------------------------Cchh--HHHHHHHHHHh-hhhhhccchHHHHHHHHHHHh
Confidence 6666665422 2335 78899865554 556778999999999999999
Q ss_pred hcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCchHH
Q psy7828 380 FYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEII 459 (503)
Q Consensus 380 ~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~~il 459 (503)
.+. |.+....|...++.+|+.|++.+.|.|+.|+..+| ...++..+||+|+|...+|++..+||-|+||. +|..++
T Consensus 318 ip~--yys~~vvGtliDQ~vfe~lve~~lP~l~~~~~~l~-~l~~Vsl~WFlslFls~m~le~a~~ilD~FF~-eG~rvl 393 (671)
T KOG4347|consen 318 IPD--YYSKTVVGTLIDQSVFEELVEDTLPVLGEHLAVLG-QLSTVSLSWFLSLFLSLMPLEYAVRILDCFFY-EGPRVL 393 (671)
T ss_pred ccc--ccchhhhhhHHHHHHHHHHHHHhhhHHHHHhhhhc-ccceEeeHHHHHHHHHHcchHHHHHHHhhhhh-cccHHH
Confidence 874 55544578888899999999999999999999999 88999999999999999999999999999998 889999
Q ss_pred HHHHHHHHHHhHHHhhCCCCHHHHHHHHhc
Q psy7828 460 SILAVAILSFRRENLMQVDTLQNVEVGYEI 489 (503)
Q Consensus 460 ~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ 489 (503)
|.||+||++.+.+.|+++++..+++.++++
T Consensus 394 FqiaLail~~N~~~il~~~dDge~~~vl~~ 423 (671)
T KOG4347|consen 394 FQIALAILKQNAERILSATDDGEAMMVLGN 423 (671)
T ss_pred HHHHHHHHHhhHHHhcccCCchHHHHHHHH
Confidence 999999999999999999999999988763
No 11
>KOG4436|consensus
Probab=99.88 E-value=8.2e-22 Score=213.34 Aligned_cols=233 Identities=17% Similarity=0.274 Sum_probs=175.7
Q ss_pred hHHHHhhhhcCCCcchHHHHHHHhhCCC------CCC--CChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCchh
Q psy7828 223 APVAQEFLKKGSPRCLRGKIWCQVLGSE------ATP--DNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVF 294 (503)
Q Consensus 223 ~~~l~~l~r~GIP~~lR~~VW~~LLg~~------~~~--~~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf~f 294 (503)
...+-..++.|||.+-||+||.++.--. +.. ...--|+.|.++...+ ...|..|+.||||+|.+|
T Consensus 567 ~ed~~~~l~~gvprsrrgeiwtflA~q~~~~~~l~~~kr~~~~p~~~llkqLte~----qhAi~idlgrtfp~h~~~--- 639 (948)
T KOG4436|consen 567 MEDLHSALRTGVPRSRRGEIWTFLAEQHSLNHALPDKKRPPDFPYKELLKQLTEQ----QHAILIDLGRTFPTHPYF--- 639 (948)
T ss_pred HHHHHHHHHccCchhhhHHHHHHHHHHHHHhccCCcccCCCCCChHHHHHHHHHH----HHHHHHhhccccCCCHHH---
Confidence 4457778999999999999999987332 111 1223456666554322 347889999999998754
Q ss_pred hHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHH
Q psy7828 295 EDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRA 374 (503)
Q Consensus 295 ~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~ 374 (503)
.+.++-. ..+..+.++.++ .+-|.-| ||||.+++++.|+ +.++|+.||-++..
T Consensus 640 ~~qlg~g------qlsl~n~Lkays------------------lld~e~g--ycqg~~fv~gvll-lh~~e~~afellk~ 692 (948)
T KOG4436|consen 640 SDQLGLG------QLSLFNLLKAYS------------------LLDPEVG--YCQGLSFVAGVLL-LHMSEENAFELLKF 692 (948)
T ss_pred Hhhcccc------HHHHHHHHHHhc------------------ccCcccc--ccCcchhhhhhhH-hhcchhhHHHHHHH
Confidence 2322210 012223332221 0112224 8899998877655 45779999999999
Q ss_pred HHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcC
Q psy7828 375 FYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYD 454 (503)
Q Consensus 375 L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~ 454 (503)
||-+-..+-.|..+. ..++..+..++++++.+.|+||+|++++.|.|..||.+||+|+|+..||...+-|++|.++. .
T Consensus 693 LM~~r~~r~qy~pdm-~~lq~qmyqLsrl~hd~hrdlyn~le~~ei~pslyAapw~lt~fasQf~lGfvarvfd~~fl-q 770 (948)
T KOG4436|consen 693 LMFDRGMRKQYRPDM-KKLQIQMYQLSRLLHDYHRDLYNHLEENEISPSLYAAPWFLTVFASQFPLGFVARVFDLIFL-Q 770 (948)
T ss_pred HHHHHhhHhhhchHH-HHHHHHHHHHHHHHHHHhHHHHHHHHhcccChHHhhhHHHHHHHHhhCcchHHHHHHHHHHh-h
Confidence 987654454565543 34455567899999999999999999999999999999999999999999999999999999 7
Q ss_pred CchHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhccc
Q psy7828 455 SLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILY 491 (503)
Q Consensus 455 ~~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls 491 (503)
|.+++|-+|+++|..++..|++++++++|..+++++-
T Consensus 771 ~tevifK~a~~llsv~k~~l~e~dn~e~i~d~~k~~~ 807 (948)
T KOG4436|consen 771 GTEVIFKVALSLLSVHKQLLLEKDNFEEIVDFLKTTL 807 (948)
T ss_pred ccchhhhhHHHHHHhhHHHHHhhhhHHHHHHHHHHhh
Confidence 7899999999999999999999999999999998753
No 12
>KOG1102|consensus
Probab=99.87 E-value=7.1e-22 Score=208.21 Aligned_cols=237 Identities=16% Similarity=0.278 Sum_probs=175.4
Q ss_pred CCChHHHHhhhhcCCCcchHHHHHHHhhCCCCCCC---ChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCchhhH
Q psy7828 220 SKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPD---NSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFED 296 (503)
Q Consensus 220 ~~~~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~~---~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf~f~d 296 (503)
..+..++...+..|||.++|+.+|..+++...... ....|...... ...-..++| +|+.||++.+.. |..
T Consensus 132 ~~~~~~l~~~~~~gip~~~r~~~W~l~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~-~d~~Rt~~~~~~---f~~ 204 (397)
T KOG1102|consen 132 LRRPLKLSRRVLVGIPDELRGLVWQLLLYAVEESLFDSLDELYRLQLDE---PEPHESEII-RDLSRTFPAHLL---FRK 204 (397)
T ss_pred cccHHHHHHHhhccccHHHHHHHHHHhcccHhhhhhhhHHHHHHHhhcc---CCCchhHHH-hhccCcCcchhh---hhh
Confidence 34467888999999999999999999999833211 11222222111 111223456 999999877543 222
Q ss_pred HHHHHHHhhccc-hhhhhhhhccCCCCCCcccccccccccccccc-CCCCCccccchHHHHHHHHHhccChhHHHHHHHH
Q psy7828 297 LLYQILLCFSRD-TEILSIFEHSSASPLYGPLKNKNTNTENLVVY-PPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRA 374 (503)
Q Consensus 297 ~l~qvl~afsrd-~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~-p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~ 374 (503)
..+ .. .++.+.+. +| .+| |..| |+|||..+++|++..+ .||+|||+++.
T Consensus 205 ~~~-------~~q~sl~~vl~--------a~-----------s~~~~~~g--y~q~m~~~a~~ll~~~-~ee~af~~lv~ 255 (397)
T KOG1102|consen 205 RYG-------VGQRSLYNVLK--------AY-----------SLYDPEVG--YCQGMSSIAAPLLLYL-PEEEAFPLLVK 255 (397)
T ss_pred hcC-------cccccccccch--------hh-----------cccCCCcc--cccchhhHhhhhhccC-chhhhhhhhhh
Confidence 111 11 11111111 11 123 3346 7889999999876654 49999999999
Q ss_pred HHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcC
Q psy7828 375 FYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYD 454 (503)
Q Consensus 375 L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~ 454 (503)
+|..+- .+.+.....|+......++.+++...|+++.|+...++...+|+.+||+|+|+..+|++.++||||.++. +
T Consensus 256 l~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~s~w~~t~f~~k~p~~~~~ri~d~~~~-~ 332 (397)
T KOG1102|consen 256 LMKNYG--LDLLSPGFSGLQRSFRQLQRLLKELIPKLLDHLLPQGIELSMYASQWFLTLFAAKFPLELVLRIWDALFV-E 332 (397)
T ss_pred hhhccc--hhcccccCCchhhhHHHHHHHHHHhChhhhhhccccccccceeccceeeEeeeccccHHHHHHHhHHHHH-h
Confidence 999884 3333333478888899999999999999999999999999999999999999999999999999999999 5
Q ss_pred CchHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhcccCCCCC
Q psy7828 455 SLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRYIP 496 (503)
Q Consensus 455 ~~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls~~~~~ 496 (503)
|..+++.+++++++...+.+++.+ ++.++.++.+-......
T Consensus 333 g~~i~~~~~~~l~~~~~~~~~~~~-~e~~~~~l~~~~~~~~~ 373 (397)
T KOG1102|consen 333 GVSILFRFSLALLKHKADDLLDLD-FESLLSYLRVDLPKSYD 373 (397)
T ss_pred chHHHHHHHHHHhhhhhHHHhhcc-HHHHHHHHhcccHhhcC
Confidence 589999999999999999999977 88888888765554443
No 13
>KOG2224|consensus
Probab=99.77 E-value=1.8e-18 Score=176.78 Aligned_cols=236 Identities=15% Similarity=0.257 Sum_probs=164.3
Q ss_pred HHHhhh-hcCCCcchHHHHHHHhhCCCCCCC-----------ChHHHHHHHHcccccchH---------HHHHhhhccCC
Q psy7828 225 VAQEFL-KKGSPRCLRGKIWCQVLGSEATPD-----------NSKYFEQLKSSVLTYDLL---------IDKLTIKDVQL 283 (503)
Q Consensus 225 ~l~~l~-r~GIP~~lR~~VW~~LLg~~~~~~-----------~~~~Ye~L~~~~~~~~~~---------~d~lI~kDv~R 283 (503)
++++.+ -+||-.++|++||.+||..+.-.. .+..|++..++..-.-++ ++=.++|||-|
T Consensus 426 ~lrk~iffggid~sir~evwpfllk~ys~est~edr~al~~~krkey~eiqqkrlysmspeeh~~fwknvq~tvdkdvvr 505 (781)
T KOG2224|consen 426 KLRKAIFFGGIDKSIRGEVWPFLLKCYSFESTFEDRAALMDIKRKEYEEIQQKRLYSMSPEEHIAFWKNVQFTVDKDVVR 505 (781)
T ss_pred HhhhhheeccchhhhhcchhHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHhheEEEEecceee
Confidence 455544 478999999999999998865421 245676665543211111 11135799999
Q ss_pred cCCCCCCCc-----hhhHHHHHHHHhhccchhhhhhhhccCCCCCCcccccccccccccccc--------CCCCCccccc
Q psy7828 284 TASNDDQYF-----VFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVY--------PPSGIIPFHG 350 (503)
Q Consensus 284 T~~~d~~yf-----~f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~--------p~~G~i~~qG 350 (503)
|-.|+. || |.-+..++|++.|+..+..+++ .+|...++. .+++ --|-+--+||
T Consensus 506 tdrnn~-ff~gddnpn~e~mk~illn~avyn~~m~y------------sqgmsdlla-pvlcevqnesetfwcfvglmqg 571 (781)
T KOG2224|consen 506 TDRNNP-FFCGDDNPNTESMKNILLNFAVYNPAMGY------------SQGMSDLLA-PVLCEVQNESETFWCFVGLMQG 571 (781)
T ss_pred ccCCCC-cccCCCCCcHHHHHHHHHhheeecccccc------------cccchhhcc-hhhhhhccccchhhhhhhhhcc
Confidence 976654 45 3445678888888776554432 222211110 0110 0110113589
Q ss_pred hHHHHHHHHHhccChhHHHHHHHHHHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCc--ccchHH
Q psy7828 351 FTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHP--IKIVFK 428 (503)
Q Consensus 351 m~~iaapLl~l~~dEedaFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~--~~~a~~ 428 (503)
|+++|||++.-..||.|+||||+.+|.+-++- ..-.+ ..+...+.-++.|++...|..|+||+++|-+. .+|+.+
T Consensus 572 msdlvapilaevldesdtfwcfvglmqna~fv-~sp~d--~dmd~~l~ylreliri~~~~fykhl~q~~ed~lellfchr 648 (781)
T KOG2224|consen 572 MSDLVAPILAEVLDESDTFWCFVGLMQNAFFV-CSPRD--EDMDHNLLYLRELIRIMHPHFYKHLEQHGEDGLELLFCHR 648 (781)
T ss_pred chhhhhhHHHhhhccccchhhhhhhhcceEEE-eCCcc--hhhhHhHHHHHHHHHHhhHHHHHHHHHhCcchhhHHHHHH
Confidence 99999999988889999999999999875432 01111 23344456789999999999999999998654 579999
Q ss_pred HHHHHhcCCCChhhHHHHHHHHHhcC-CchHHHHHHHHHHHHhHHHhhCC
Q psy7828 429 WIMRCFSGHLPPDQILYLWDLILAYD-SLEIISILAVAILSFRRENLMQV 477 (503)
Q Consensus 429 WfltlFs~~lp~~~vLrIWD~~l~~~-~~~il~~vAlAIL~~~~~~LL~~ 477 (503)
|++.||.++||...++|||...+++- ...++.++|+||+..+.+.+++-
T Consensus 649 wlllcfkref~ea~airiweacwa~y~tdyfhlficlaiiaiy~ddvi~q 698 (781)
T KOG2224|consen 649 WLLLCFKREFPEAEAIRIWEACWAHYLTDYFHLFICLAIIAIYADDVIAQ 698 (781)
T ss_pred HHHHHhhhcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhHHHHh
Confidence 99999999999999999999999832 34689999999999999988753
No 14
>KOG2221|consensus
Probab=99.67 E-value=3.4e-17 Score=155.33 Aligned_cols=174 Identities=17% Similarity=0.258 Sum_probs=128.5
Q ss_pred hHHHHhhhhcCCCcchHHHHHHHhhCCCCC-CCChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCchhhHHHHHH
Q psy7828 223 APVAQEFLKKGSPRCLRGKIWCQVLGSEAT-PDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQI 301 (503)
Q Consensus 223 ~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~-~~~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf~f~d~l~qv 301 (503)
.+.++..|++|||+++|+..|+.|.|+... ..++..|+.+....... ..-+-|++|++|.||+|..| ......++
T Consensus 93 ~~~ir~rcrkgippslr~Raw~ylsGa~~~~~~np~~~~~~~~~pG~p--~t~e~i~kdl~rqfp~hemf-~s~~k~gk- 168 (267)
T KOG2221|consen 93 QKKIRPRCRKGIPPSLRGRAWRYLSGAPSPPPKNPVVFDELGPAPGDP--KTAEGIHKDLHRQFPFHEMF-GSSGKTGK- 168 (267)
T ss_pred cccccchhhcCCCcccchhHHHhhcCCCCCCCCCcchhhhccCCCCCC--cchhhhccccccCCCccccc-ccccccch-
Confidence 446888999999999999999999999876 45778899887664432 23357999999998887653 22221221
Q ss_pred HHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHHhhc
Q psy7828 302 LLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFY 381 (503)
Q Consensus 302 l~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~~~~ 381 (503)
++..++++.++ ...|..| |||+=.-|+|.++ +-+.++||||||+.++++|.+
T Consensus 169 -------qelfr~lka~t------------------i~~pe~g--~cq~qapiaa~ll-mhmp~rdaf~~~vqicekylq 220 (267)
T KOG2221|consen 169 -------QELFRVLKAYT------------------IYKPEEG--YCQAQAPIAAVLL-MHMPARDAFWCFVQICEKYLQ 220 (267)
T ss_pred -------HHHHHHHHHHH------------------HhCchhh--hhhhhchHHHHHH-hcccHHHHHHHHHHHHHHHcc
Confidence 33333333222 0124446 7788777887654 556789999999999999976
Q ss_pred ccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHH
Q psy7828 382 HLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWI 430 (503)
Q Consensus 382 ~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~Wf 430 (503)
. |.++....|+.+-.+++.|+++.+|-.|.||...+++|.+|...||
T Consensus 221 g--y~~sgleaiq~dg~il~~Llkk~~~p~~rH~~~~kvdp~lym~ewF 267 (267)
T KOG2221|consen 221 G--YYSSGLEAIQNDGGILEGLLKKASPPPYRHLGGDKVDPLLYMTEWF 267 (267)
T ss_pred c--ccccchhhhhcccHHHHHHHHhcCCCCCcccccCCCCHHHhhhccC
Confidence 4 4443334555566799999999999999999999999999999997
No 15
>KOG2197|consensus
Probab=99.66 E-value=1.9e-16 Score=170.49 Aligned_cols=218 Identities=18% Similarity=0.233 Sum_probs=161.0
Q ss_pred hhhhcCCCcchHHHHHHHhhCCCCCCCCh----------HHHHHHHHccccc----ch------HHHHHhhhccCCcCCC
Q psy7828 228 EFLKKGSPRCLRGKIWCQVLGSEATPDNS----------KYFEQLKSSVLTY----DL------LIDKLTIKDVQLTASN 287 (503)
Q Consensus 228 ~l~r~GIP~~lR~~VW~~LLg~~~~~~~~----------~~Ye~L~~~~~~~----~~------~~d~lI~kDv~RT~~~ 287 (503)
...+.|+=..+|+.+|+.+.++.+..... ..|..++.+.... +. .....|.+|+.||-..
T Consensus 172 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~qW~~~~~~~~~~~~~~~~~~~~i~~dv~rtDr~ 251 (488)
T KOG2197|consen 172 RIFSGGLSKSLRAEVWKFLLDYSPWDSTTRERVSLRKLTDEYFRLKLQWSSTSPEQSPESEGYLERKSRIEKDVGRTDRS 251 (488)
T ss_pred eecccccccchhhhhhhhhhcccCcccccccccccccccccHhhhhhhheeccccccccccchhhhhhhhhhhccccchh
Confidence 55556675599999999999998764322 1466666553211 11 2236799999999544
Q ss_pred CCCCchhhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhH
Q psy7828 288 DDQYFVFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVIS 367 (503)
Q Consensus 288 d~~yf~f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEed 367 (503)
+..| .+.+.- +.+.+..+.. .| ....+..| |+|||+++.+|++.++.+|.+
T Consensus 252 ~~~~-~~~~n~---------~~~~l~~iL~-------ty----------~~~~~d~G--Y~QgmSDllspi~~v~~de~~ 302 (488)
T KOG2197|consen 252 LEFY-EGEENP---------HLARLVDILL-------TY----------AVYDFDLG--YCQGMSDLLSPILIVMEDEVE 302 (488)
T ss_pred hhhh-hccccc---------CHHHHHHHHh-------hc----------ccccCccc--cccCchhhcCcceeeecCchH
Confidence 3322 111110 0111111110 11 11224446 889999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHH
Q psy7828 368 LYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLW 447 (503)
Q Consensus 368 aFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIW 447 (503)
|||||+.+|++. +-+|-.+. .|+......+..+++..+|.+++||++.+.....++++|++..|-++|.++.++++|
T Consensus 303 aFwcFv~fm~~~--~~nF~~d~-~~~~~Ql~~~~~li~~~dp~l~~hLe~~d~~~~~f~fr~l~v~frrEf~~ed~l~LW 379 (488)
T KOG2197|consen 303 AFWCFVGFMDRL--RHNFRIDQ-SGMQTQLAQLSSLIQELDPRLYQHLEKLDAGDLFFCFRMLLVPFRREFEFEDSLRLW 379 (488)
T ss_pred HHHHHHHHHHHH--hhcCcccc-ccHHHHhhhhhhhccccCHHHHhhccccCCCccceeeehhhcccccccccccHHHHH
Confidence 999999999996 32454443 688888888889999999999999999999999999999999999999999999999
Q ss_pred HHHHhcC-CchHHHHHHHHHHHHhHHHhhCC
Q psy7828 448 DLILAYD-SLEIISILAVAILSFRRENLMQV 477 (503)
Q Consensus 448 D~~l~~~-~~~il~~vAlAIL~~~~~~LL~~ 477 (503)
.+++... ...+.++++.|++......|+..
T Consensus 380 Evlw~~~~~~~f~~~~~~~~l~~~~~~l~~~ 410 (488)
T KOG2197|consen 380 EVLWTDLPSPHFHLYVAPAILNKDPQTLMEQ 410 (488)
T ss_pred HHHHhcCccchHHHHHHHhhhhcchHHHHhc
Confidence 9999843 56899999999999988888864
No 16
>KOG3636|consensus
Probab=99.62 E-value=4.1e-15 Score=153.09 Aligned_cols=216 Identities=23% Similarity=0.301 Sum_probs=160.1
Q ss_pred CCCcchHHHHHHHhhCCCCCCCChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCchhhHHHHHHHHhhccchhhh
Q psy7828 233 GSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEIL 312 (503)
Q Consensus 233 GIP~~lR~~VW~~LLg~~~~~~~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf~f~d~l~qvl~afsrd~~vl 312 (503)
|=|.++ |+.+||+.-+......|+++ ++.+.+.+|++|..|-. + .---+.+|... ++... .+++
T Consensus 36 G~~~~~----W~~~L~V~~K~d~l~~wd~i------ydLp~Q~~lr~DC~~~~-d-~l~n~ee~~v~-vv~dl---ES~i 99 (669)
T KOG3636|consen 36 GNDKSD----WMRLLGVSMKPNPLDDWDQI------YDLPNQCALRNDCRKLA-D-GLKNKEEDKVP-VVSDL---ESFI 99 (669)
T ss_pred CCCHHH----HHHHhcccCCCCchhhHHHH------hCCchhhHHHHHHHHHH-h-hcCCchhhccc-hhHhh---hhHh
Confidence 557666 99999998887666677776 56667778889987642 1 00001111110 00000 0111
Q ss_pred hhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHHhhcccCCCCcChHh
Q psy7828 313 SIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQG 392 (503)
Q Consensus 313 ~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~~~~~l~~~~~~~~G 392 (503)
..|.+.+. ..|- +--|+..++-||+.+-.+-.+.|.||.+++++|.|+. +. |.|
T Consensus 100 -----------TfYCK~Rn------~~Y~-----~d~gWi~lL~pl~~L~lprsd~fN~F~ai~~kYIPkd-cr---pkg 153 (669)
T KOG3636|consen 100 -----------TFYCKKRN------MDYI-----KDIGWITLLEPLLLLNLPRSDEFNVFFAITTKYIPKD-CR---PKG 153 (669)
T ss_pred -----------hhhhhccC------Cccc-----ccccHHHHHHHHHHhcCCcchhhhhhHhhhhcccCCC-CC---CCC
Confidence 12222110 0121 1238999999999988888999999999999999873 32 223
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCchHHHHHHHHHHHHhHH
Q psy7828 393 ILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRE 472 (503)
Q Consensus 393 i~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~~il~~vAlAIL~~~~~ 472 (503)
+...+|+.||+.|+|+|++||+...|.|.+|+..||-++|+.+.+.+.+.-+||.|+-...+.++|++|+-||..-++
T Consensus 154 --~~Fh~FRLLlqYHdPelc~~LdtkkitPd~Y~lnWf~sLFas~~Stev~~a~WdlY~qqaDPF~vffLaliiLiNake 231 (669)
T KOG3636|consen 154 --QIFHLFRLLLQYHDPELCNHLDTKKITPDMYTLNWFASLFASSMSTEVCHALWDLYIQQADPFLVFFLALIILINAKE 231 (669)
T ss_pred --ccchHHHHHHHhcCHHHhhhhhccccCchHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCceehHHHHHHHhcccHH
Confidence 346789999999999999999999999999999999999999999999999999999977888999999999999999
Q ss_pred HhhCC--CCHHHHHHHHhcccC
Q psy7828 473 NLMQV--DTLQNVEVGYEILYG 492 (503)
Q Consensus 473 ~LL~~--~~~~~i~~~L~~ls~ 492 (503)
+||+. ++-+++..+|++.+.
T Consensus 232 ~ILq~~sdsKEe~ikfLenmp~ 253 (669)
T KOG3636|consen 232 EILQVKSDSKEEAIKFLENMPA 253 (669)
T ss_pred HHhhhccccHHHHHHHHHcCch
Confidence 99976 556899999987653
No 17
>KOG2595|consensus
Probab=99.61 E-value=1.5e-14 Score=145.22 Aligned_cols=234 Identities=12% Similarity=0.174 Sum_probs=154.5
Q ss_pred ChHHHHhhhhc--C-CCcchHHHHHHHhhCCCCCCCChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCchhhHHH
Q psy7828 222 HAPVAQEFLKK--G-SPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLL 298 (503)
Q Consensus 222 ~~~~l~~l~r~--G-IP~~lR~~VW~~LLg~~~~~~~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf~f~d~l 298 (503)
+.+.++.+... | +-+++|..+|..|+|..-...+...+....+. ..-..|+..|++|++.. |-|..+..
T Consensus 47 dv~~Lr~i~l~p~Glv~dslRk~vWp~L~~~~~n~~~~~~~~~~~q~-----hkd~nQV~LDv~RSl~r---fppg~p~~ 118 (395)
T KOG2595|consen 47 DVDALRYIGLSPGGLVNDSLRKDVWPELLALNINHLDATSTLTPVQK-----HKDYNQVILDVERSLGR---FPPGIPKE 118 (395)
T ss_pred cHHHHHHhccCCCccccHHHHHHHHHHHhccccCCCcccccCChhhh-----CcccceEEEehhhhhcc---CCCCCCHH
Confidence 35556665554 3 57899999999999987665432222222221 11125789999999854 21111111
Q ss_pred HHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHH
Q psy7828 299 YQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLR 378 (503)
Q Consensus 299 ~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~ 378 (503)
.+..+ ..++...+. ..+ ..||.- .||||+.+||..|++++. |.+|+-+..++-.-
T Consensus 119 ~R~~L----q~qL~~LI~--------rVl----------~~yP~L--~YYQGyHDI~~tfLLv~g-E~~Al~l~E~L~~~ 173 (395)
T KOG2595|consen 119 LRLQL----QKQLTELIL--------RVL----------RKYPTL--NYYQGYHDIVVTFLLVVG-ELEALSLMEELSTL 173 (395)
T ss_pred HHHHH----HHHHHHHHH--------HHH----------HHCCCc--chhcchhHHHHHHHHhhh-hHhhhHHHHHHHHH
Confidence 11000 011111111 000 114432 399999999999998876 78888766666543
Q ss_pred hhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCC-ChhhHHHHHHHHHhcCCch
Q psy7828 379 YFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHL-PPDQILYLWDLILAYDSLE 457 (503)
Q Consensus 379 ~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~l-p~~~vLrIWD~~l~~~~~~ 457 (503)
++ + .|+...-.+..+.+..+--+++..+|+||+.|++-.+.+ +|+..|.+|.|+..+ +...++|++|.|++....
T Consensus 174 ~l-r-dfM~~Tld~t~~qL~~i~~iIk~~nP~Ly~~l~~aevgt-lFaLsWllTWFaH~L~~~~~vvRlfD~Flas~pl- 249 (395)
T KOG2595|consen 174 HL-R-DFMLPTLDFTVRQLRLISPIIKEVNPELYQFLQSAEVGT-LFALSWLLTWFAHNLKDIRIVVRLFDFFLASHPL- 249 (395)
T ss_pred HH-H-HHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHhhcccc-eehhhHHHHHHhhcchhHHHHHHHHHHHHhcCcc-
Confidence 33 2 233322245666777888899999999999999999876 499999999999998 999999999999995544
Q ss_pred HHHHHHHHHHHHhHHHhhCCCCH-HHHHHHHhcccC
Q psy7828 458 IISILAVAILSFRRENLMQVDTL-QNVEVGYEILYG 492 (503)
Q Consensus 458 il~~vAlAIL~~~~~~LL~~~~~-~~i~~~L~~ls~ 492 (503)
.-.+++++++..++.+|++|.-. .-+-..|+.++.
T Consensus 250 ~piyv~A~vvL~r~~eIl~~~~dms~~H~lLs~iPq 285 (395)
T KOG2595|consen 250 LPIYVYAAVVLYRRSEILKCDCDMSLLHGLLSTIPQ 285 (395)
T ss_pred hhHHHHHHHhhhhHHHHHHHHhhhHHHHHHHHhCcc
Confidence 77788999999999999987422 334455555543
No 18
>KOG1091|consensus
Probab=99.50 E-value=2.5e-13 Score=143.80 Aligned_cols=179 Identities=20% Similarity=0.322 Sum_probs=124.5
Q ss_pred HHhhhccCCcCCCCCCCchh---hHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccch
Q psy7828 275 KLTIKDVQLTASNDDQYFVF---EDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGF 351 (503)
Q Consensus 275 ~lI~kDv~RT~~~d~~yf~f---~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm 351 (503)
+.|..|+.||||.+..||+- +..+.+||.+|.++.+- .| |=|||
T Consensus 106 ~~i~qDvsRtfPe~~~fFqs~~~q~mLr~iLl~~~lehp~-------------------------------i~--YrQGM 152 (625)
T KOG1091|consen 106 KTIDQDVSRTFPEHSLFFQSPEVQGMLRRILLLYALEHPE-------------------------------IG--YRQGM 152 (625)
T ss_pred HhhcchhhccCcchhhhhcCchhhHHHHHHHHHHHhhchh-------------------------------hh--HHhhh
Confidence 68999999999998777764 34577777777664321 11 44688
Q ss_pred HHHHHHHHHhccCh------------------------------hHHH--HHHHHHHH--HhhcccC-------------
Q psy7828 352 TMYATPFCYLYDDV------------------------------ISLY--FTFRAFYL--RYFYHLH------------- 384 (503)
Q Consensus 352 ~~iaapLl~l~~dE------------------------------edaF--w~f~~L~~--~~~~~l~------------- 384 (503)
-.+.||++|+..-. .+++ -+|..+|. .|+...+
T Consensus 153 HElLAPl~fVl~~D~q~l~h~se~~~~~l~f~E~d~iy~~~y~k~d~dn~~lqs~lmls~~~~~e~e~g~~~~e~~ie~d 232 (625)
T KOG1091|consen 153 HELLAPLLFVLHVDNQALLHVSESLFDKLGFEERDVIYNFLYLKTDLDNTELQSVLMLSDEYGYEEELGIVLSEKLIEHD 232 (625)
T ss_pred hhhhhhhhhheehhHHHHHHHHHhhhhhcCcchhhhhhhHHHHhhhccchhHHHHHHhhhccccccCcceecCcccCCcC
Confidence 88888877663211 2222 23333332 2221100
Q ss_pred -C--CCcChHhHHH---HHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCc--
Q psy7828 385 -Q--VSSNEQGILS---LCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSL-- 456 (503)
Q Consensus 385 -~--~~~~~~Gi~~---l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~-- 456 (503)
| .....+|+.. .+..+..++..+|+.|+.||.+.||.|..|..+|.-.+|.++||+..+|.+||.++.++++
T Consensus 233 ay~~~d~l~~~l~~v~e~~~~~~~lL~~~D~~Lh~HL~~l~i~pqifgiRWlRlLFGREfpL~dLLiVWD~~l~~d~pr~ 312 (625)
T KOG1091|consen 233 AYVMFDALMPGLPPVFEANFAQYHLLAKVDKSLHSHLVELGIEPQIFGIRWLRLLFGREFPLQDLLIVWDHVLIFDSPRG 312 (625)
T ss_pred cccchhhhcccchhHHHHhhhhhhhhhhccHHHHHHHHhcCCchHHHHHHHHHHHHcchhHHHHHHHHhhhhhhccCchH
Confidence 1 0111134333 3446789999999999999999999999999999999999999999999999944444654
Q ss_pred hHHHHHHHHHHHHhHHHhhCCCCHHHHHHHH
Q psy7828 457 EIISILAVAILSFRRENLMQVDTLQNVEVGY 487 (503)
Q Consensus 457 ~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L 487 (503)
.++.++++|+|...++.|+..++.. .++.+
T Consensus 313 ~Lv~~m~VsmLL~IRd~Llss~~~t-cL~~L 342 (625)
T KOG1091|consen 313 ILVACMFVSMLLYIRDSLLSSEYQT-CLQYL 342 (625)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchh-HHHHH
Confidence 4677888999999999999877655 44444
No 19
>KOG4436|consensus
Probab=99.35 E-value=4.4e-12 Score=138.61 Aligned_cols=239 Identities=16% Similarity=0.145 Sum_probs=166.8
Q ss_pred hHHHHhhhhcCCCcchHHHHHHHhhCCCCCCCC--hHHHHHHHHcccccch-HHHHHhhhccCCcCCCCCCCchhhHHHH
Q psy7828 223 APVAQEFLKKGSPRCLRGKIWCQVLGSEATPDN--SKYFEQLKSSVLTYDL-LIDKLTIKDVQLTASNDDQYFVFEDLLY 299 (503)
Q Consensus 223 ~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~~~--~~~Ye~L~~~~~~~~~-~~d~lI~kDv~RT~~~d~~yf~f~d~l~ 299 (503)
...++.++.+|+|+..|-.+|+.++.+....+. ...|.++.....+.+. ..-..|.+|+.||.+.|.. |.-.+..-
T Consensus 174 ~~~l~e~Ve~~~p~~frli~~qlLssatd~~q~~I~e~~sdl~~~s~~~Ek~~~~~~Irrdi~~~~~eh~~-fke~~s~~ 252 (948)
T KOG4436|consen 174 LHKLKELVEGGIPMHFRLIRWQLLSSATDREQALIFEDYSDLAPCSSQQEKELHIGIIRRDIERTYPEHYF-FKEQSSTV 252 (948)
T ss_pred hhhhHHHHhcCCchHHHHHHHHHhcccccchhhHHHHHHHHHhhhcchhhhhHHHHHHHHHhhccCcceee-eccCccCC
Confidence 456999999999999999999999988877643 2556666665444332 1224899999999887653 32222110
Q ss_pred HHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHHh
Q psy7828 300 QILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRY 379 (503)
Q Consensus 300 qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~~ 379 (503)
--...|.. .-+.+.++.++ . ..- -++++||-+.+++- +.+.+++|.+|-+++.+|..|
T Consensus 253 ~~~~~~~~-d~LfN~~K~~~--------~-----------~~~-E~ifsqGs~~m~Gl-l~l~~~~E~assv~~~lm~~~ 310 (948)
T KOG4436|consen 253 CSDIRFAQ-DQLFNVAKAYS--------T-----------KDL-EVIFSQGSAFMVGL-LLLQMPVEEASSVKVQLMILY 310 (948)
T ss_pred cchhHHHH-HHHHHHHHHHh--------h-----------hhh-hhhhccchHHHHHH-HHhcCcHHHHHHHHHHHHHhh
Confidence 00000000 00111121111 0 000 12478898888875 455678999999999999988
Q ss_pred hcccCCCCcChHhHHH-HHHHHHHHHHhhch-HHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCch
Q psy7828 380 FYHLHQVSSNEQGILS-LCILFHRLLQRYEP-QLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLE 457 (503)
Q Consensus 380 ~~~l~~~~~~~~Gi~~-l~~~fe~LL~~~~P-~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~~ 457 (503)
++...+..+..... ....++...+...| .++.||.+.+++.++|+..||++.|.+.+|+...-|+-|.+.+ +|..
T Consensus 311 --rl~~l~kpe~~~l~~~~~q~e~~~q~~sp~dl~sH~~eq~~h~S~~~rs~flt~~ltt~Pi~~a~r~~~~f~~-egll 387 (948)
T KOG4436|consen 311 --RLRELSKPEMEPLGLCMFQLECTNQDQSPMDLFSHFPEQHFHTSMYARSWFLTNFLTTFPIFMAARISDTFSS-EGLL 387 (948)
T ss_pred --cccccCCcccchhHHHHHhhcccccccchhHHhhcccccCCCccHHHHHHHHHhhcccCchhhcccccccccc-ccHH
Confidence 76666644434444 34578999999999 9999999999999999999999999999999999999999998 8888
Q ss_pred HHHHHHHHHH-HHhHHHhhCCCCHHHHHHHHh
Q psy7828 458 IISILAVAIL-SFRRENLMQVDTLQNVEVGYE 488 (503)
Q Consensus 458 il~~vAlAIL-~~~~~~LL~~~~~~~i~~~L~ 488 (503)
..|++.+|++ ..+.-.+++ .++++....++
T Consensus 388 k~fr~~ia~~~~~~d~~~~s-~D~EG~~~~~q 418 (948)
T KOG4436|consen 388 KRFRDSIAYLHQLRDIELES-LDMEGMLSYFQ 418 (948)
T ss_pred HHHhhhHHHHHHHhhhhhhc-cCccccccchh
Confidence 8899999999 444444444 44666554444
No 20
>KOG2801|consensus
Probab=97.76 E-value=0.00022 Score=71.45 Aligned_cols=232 Identities=16% Similarity=0.219 Sum_probs=133.7
Q ss_pred hHHHHhhhhcCC---CcchHHHHHHHhhCCCCCC---CChHHHHHHHHc-ccccchHHHHHhh-hccCCcCCCCCCCc--
Q psy7828 223 APVAQEFLKKGS---PRCLRGKIWCQVLGSEATP---DNSKYFEQLKSS-VLTYDLLIDKLTI-KDVQLTASNDDQYF-- 292 (503)
Q Consensus 223 ~~~l~~l~r~GI---P~~lR~~VW~~LLg~~~~~---~~~~~Ye~L~~~-~~~~~~~~d~lI~-kDv~RT~~~d~~yf-- 292 (503)
..+++++.|.|. ...+||.|++.+..-.+.. .+...|.....+ +..+.+.+-.+-+ .|-... +.|.
T Consensus 32 lqelkqlarqgywaqshalrgkvyqrlirdipcrtvtpdasvysdivgkivgkhsssclplpefvdntqv----psycln 107 (559)
T KOG2801|consen 32 LQELKQLARQGYWAQSHALRGKVYQRLIRDIPCRTVTPDASVYSDIVGKIVGKHSSSCLPLPEFVDNTQV----PSYCLN 107 (559)
T ss_pred HHHHHHHHhcchHHhhhhhhhHHHHHHHhcCCccccCCchhHHHHHHHHHhccCCcccccchhhcccCcC----chhhhc
Confidence 557899999996 6679999999998766642 244566655443 2222211000000 000000 0111
Q ss_pred -hhhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCcccc-chHHHHHHHHHhccChhHHHH
Q psy7828 293 -VFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFH-GFTMYATPFCYLYDDVISLYF 370 (503)
Q Consensus 293 -~f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~q-Gm~~iaapLl~l~~dEedaFw 370 (503)
..+..++.|++|.+. .+|.. .|+ .+-.++|.++-..-||+++|-
T Consensus 108 argegavrkilKOGan-------------------------------qfpdi---sfcpalpavvalllhysideaecfe 153 (559)
T KOG2801|consen 108 ARGEGAVRKILLCLAN-------------------------------QFPDI---SFCPALPAVVALLLHYSIDEAECFE 153 (559)
T ss_pred CcCchhHHHHHHHHhc-------------------------------cCCCc---ccCcchHHHHHHHHHhcccHHHHHH
Confidence 012223333333321 12322 233 566667766555568888776
Q ss_pred HHHHHHHHhhcccCCCC-cChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHH
Q psy7828 371 TFRAFYLRYFYHLHQVS-SNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDL 449 (503)
Q Consensus 371 ~f~~L~~~~~~~l~~~~-~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~ 449 (503)
--+.++.-.-+.-..+. ++ -.+.+-|..|-.|+.++...-++-+....-+.......|---+| +++|+-..-|++|.
T Consensus 154 kacrilacndpgrrlidqsf-lafesscmtfgdlvnkycqaahklmvavsedvlqvyadwqrwlf-gelplcyfarvfdv 231 (559)
T KOG2801|consen 154 KACRILACNDPGRRLIDQSF-LAFESSCMTFGDLVNKYCQAAHKLMVAVSEDVLQVYADWQRWLF-GELPLCYFARVFDV 231 (559)
T ss_pred HhheeeeecCcchhhhhhHH-HHHHhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh-ccchHHHHHHHhhh
Confidence 54444321101000111 11 23445577888899988877777666655555556667776666 78999999999999
Q ss_pred HHhcCCchHHHHHHHHHHHHhHHH----hhCCCCH-HHHHHHHhcccCCCC
Q psy7828 450 ILAYDSLEIISILAVAILSFRREN----LMQVDTL-QNVEVGYEILYGRYI 495 (503)
Q Consensus 450 ~l~~~~~~il~~vAlAIL~~~~~~----LL~~~~~-~~i~~~L~~ls~~~~ 495 (503)
|+. +|.+++.++|+||+++..+. -++.++. ++|-.+..+|..--.
T Consensus 232 flv-egykvlyrvalailkffhkvragqplesdsvkqdirtfvrdiaktvs 281 (559)
T KOG2801|consen 232 FLV-EGYKVLYRVALAILKFFHKVRAGQPLESDSVKQDIRTFVRDIAKTVS 281 (559)
T ss_pred eee-cchHHHHHHHHHHHHHHHHhhcCCCCccchHHHHHHHHHHHHHhhCC
Confidence 999 88999999999999987653 2333333 567677766654433
No 21
>PF14961 BROMI: Broad-minded protein
Probab=97.32 E-value=0.0017 Score=75.62 Aligned_cols=142 Identities=20% Similarity=0.322 Sum_probs=106.6
Q ss_pred cccchHHHHHHHHHhc-cChhHHHHHHHHH---HH-Hh--hcccCCCCcCh-----HhHHHH----HHHHHHHHHhhchH
Q psy7828 347 PFHGFTMYATPFCYLY-DDVISLYFTFRAF---YL-RY--FYHLHQVSSNE-----QGILSL----CILFHRLLQRYEPQ 410 (503)
Q Consensus 347 ~~qGm~~iaapLl~l~-~dEedaFw~f~~L---~~-~~--~~~l~~~~~~~-----~Gi~~l----~~~fe~LL~~~~P~ 410 (503)
.|.|.-=+|+.+.+++ .|.+.+.-++..| +. .| ++|+|.....+ +||... +..+|.+|+...|.
T Consensus 1101 ~y~g~DWFvstvfli~~Gd~e~~~~fL~~fS~ll~SaflW~pRlh~s~~l~~~~~~s~i~p~~~~~~~~vE~ll~~E~P~ 1180 (1296)
T PF14961_consen 1101 SYPGHDWFVSTVFLIMLGDKERSLQFLQRFSRLLTSAFLWPPRLHASIHLPVDTAESGIHPVYFCSCHYVEMLLKAELPL 1180 (1296)
T ss_pred CCCCchhHHHHHHHHHcCChhHhHHHHHHHHHHHHHhHhccccccccccCCchhhhcCCCchhhhHHHHHHHHHHhhccH
Confidence 6778887787776666 4555555444433 22 22 35666532221 444443 46799999999999
Q ss_pred HHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCchHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhc
Q psy7828 411 LFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEI 489 (503)
Q Consensus 411 L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ 489 (503)
++.-|.-.|..|..++.+|+.-||=+.+++..+..--=..+.+| .++-.++++|||+..+++||+.....++..+|+.
T Consensus 1181 V~saf~~sg~tpsqi~~rW~~QcFWnyldW~eI~~y~~~cil~G-~dyqvY~~VailkHlq~~ilq~~q~q~L~~flke 1258 (1296)
T PF14961_consen 1181 VFSAFRMSGFTPSQICQRWLSQCFWNYLDWPEICHYIAICILYG-PDYQVYICVAILKHLQPEILQHTQTQDLQVFLKE 1258 (1296)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhcC-ccceeehhHHHHHHhhHHHHHhhhhchHHHHhhh
Confidence 99999999999999999999999999999988876655555534 6788899999999999999988766777777764
No 22
>KOG2224|consensus
Probab=94.76 E-value=0.0083 Score=63.02 Aligned_cols=46 Identities=13% Similarity=0.146 Sum_probs=34.1
Q ss_pred cccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHHh
Q psy7828 332 TNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRY 379 (503)
Q Consensus 332 ~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~~ 379 (503)
.++.+++..|.-| |-|||++++||.+--..+|.++||||+.+|...
T Consensus 527 illn~avyn~~m~--ysqgmsdllapvlcevqnesetfwcfvglmqgm 572 (781)
T KOG2224|consen 527 ILLNFAVYNPAMG--YSQGMSDLLAPVLCEVQNESETFWCFVGLMQGM 572 (781)
T ss_pred HHHhheeeccccc--ccccchhhcchhhhhhccccchhhhhhhhhccc
Confidence 3344443334434 778999999998777788999999999998643
No 23
>KOG1648|consensus
Probab=89.93 E-value=0.047 Score=58.51 Aligned_cols=193 Identities=17% Similarity=0.224 Sum_probs=110.5
Q ss_pred HHHHHhcCCC---hHHHHhhhhcCCCcchHHHHHHHhhCCCCCC--------C---ChHHHHHHHHcccccchHHHHHhh
Q psy7828 213 LGEKVLNSKH---APVAQEFLKKGSPRCLRGKIWCQVLGSEATP--------D---NSKYFEQLKSSVLTYDLLIDKLTI 278 (503)
Q Consensus 213 ~~~~vl~~~~---~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~--------~---~~~~Ye~L~~~~~~~~~~~d~lI~ 278 (503)
.+++..+... -..++.-.++|+-...|...|..+++-.... . -.++|++-....-.-+. ..|.
T Consensus 535 ~W~qy~~d~t~~e~~~l~~~~~g~~e~~~r~~~~p~~~~~~~~g~~~~~~d~~e~~~s~~y~~~l~~~~~~~~---~~~~ 611 (813)
T KOG1648|consen 535 FWKQYRADPTIEEWRVLEAEVRGRDEEAFRAARAPKAASPVREGSCDVFEDPNEPTCSQHYDRNLITLFRANL---HRID 611 (813)
T ss_pred HHHHHhcCCchHHHHHHHHHHhcccHHHHhhcccccccccccccccchhcCCCccHHHHHHHHHHHHHHhhhe---eeec
Confidence 3444444433 3347778899999999999999998764311 1 13667653222111111 2467
Q ss_pred hccCCcCCCCCCCchhhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHH
Q psy7828 279 KDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPF 358 (503)
Q Consensus 279 kDv~RT~~~d~~yf~f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapL 358 (503)
+|+.|.- ..-.||...|.+.. | .+ .+ .|... .-.+| |+|||.++.+|+
T Consensus 612 kd~e~~~-~~~~~fs~~~~les------~--~~-~~----------~~~~~----------~l~~~--~~~~~~dl~~p~ 659 (813)
T KOG1648|consen 612 KDVERCD-RNLMFFSNKDNLES------R--RV-MY----------TYVRR----------NLEEG--YTQGMCDLLAPL 659 (813)
T ss_pred chhhhCc-chheeecCCcchhh------h--ee-ee----------eeecc----------ccccc--cccchhhccCCc
Confidence 8887763 33344555554432 0 00 00 01100 01235 789999999999
Q ss_pred HHhccChhHHHHHHHHHHHHhhcccCCCC--cChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcC
Q psy7828 359 CYLYDDVISLYFTFRAFYLRYFYHLHQVS--SNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSG 436 (503)
Q Consensus 359 l~l~~dEedaFw~f~~L~~~~~~~l~~~~--~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~ 436 (503)
+.-+.||.-.--||.-+|-+- +.++.. +...|+..+ ++.+-.+| |-.-++ ..+...|+||..-|-+
T Consensus 660 ~~~~ed~~~~~e~~s~~~~~q--~~~~~q~~~~~~~l~~~-----r~~~v~~~-l~s~id----~~qa~~f~~~~~~~~~ 727 (813)
T KOG1648|consen 660 LVTFEDEALTLECFSLLMLRQ--RGKFPQRPGMSKCLLNL-----RLIQVVDP-LISDID----YAQALSFRWFLLDFKR 727 (813)
T ss_pred CCChhhcccccCCCcHHHHHh--cccCCCCCCcccccccc-----cchhhhcc-hhcchh----hhhhcceeeeccCccc
Confidence 887777755555666565544 334432 111233222 25566666 211111 1234569999999999
Q ss_pred CCChhhHHHHHHHHHh
Q psy7828 437 HLPPDQILYLWDLILA 452 (503)
Q Consensus 437 ~lp~~~vLrIWD~~l~ 452 (503)
.+.-+....+|.+++.
T Consensus 728 ~~s~~~~~~~~~~~~~ 743 (813)
T KOG1648|consen 728 ELSYECTYKVWEVIWA 743 (813)
T ss_pred ccCCCCcceeeEeecc
Confidence 9999999999998887
No 24
>PF10597 U5_2-snRNA_bdg: U5-snRNA binding site 2 of PrP8; InterPro: IPR019581 The essential spliceosomal protein Prp8 interacts with U5 and U6 snRNAs and with specific pre-mRNA sequences that participate in catalysis []. This close association with crucial RNA sequences, together with extensive genetic evidence, suggests that Prp8 could directly affect the function of the catalytic core, perhaps acting as a splicing cofactor [].
Probab=59.21 E-value=53 Score=29.76 Aligned_cols=97 Identities=21% Similarity=0.266 Sum_probs=54.1
Q ss_pred hHHHHHHHhhCCCCChhhHHHHHHHHHHhhcHHHHHHHHHHHHHHhcCCCCCCCCCCChHHHHHHHH---HHHHHHHHHH
Q psy7828 15 SMTLFQRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWAEPLTYLRKAQ---FQWEKRIQKS 91 (503)
Q Consensus 15 ~~~~~q~~~~~~~v~~~~~~~~l~~~~~~~g~e~~l~n~v~~~~~~~~~~~~~~~~~~pl~~~~~a~---~~w~~~~~~~ 91 (503)
-|+-++..+.-++-.++.|+.-+++.+-.+|--|=-+-+- .|=..- -.=-.|.|.|- ...-+.+.|.
T Consensus 14 ke~ta~a~l~vS~~~i~~F~~rir~ilm~sgsttF~Ki~~-KWNt~l---------i~l~~YfREA~~~T~~lldil~k~ 83 (135)
T PF10597_consen 14 KERTAQAFLRVSDESIKNFENRIRQILMSSGSTTFTKIAN-KWNTAL---------IGLMTYFREAIVNTEELLDILVKC 83 (135)
T ss_pred hhhhhHHHhhcCHHHHHHHHHHHHHHHHHhccchHHHHHH-HHHHHH---------HHHHHHHHHHHhccHHHHHHHHHH
Confidence 3555666766667777779999999998888654332211 220000 00124555554 2344445555
Q ss_pred HHHHHHHhCCcccccCCCCChhhhhhhhhhcccccCCCcccccc--cCchhHH
Q psy7828 92 LNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPV--YAPKDFL 142 (503)
Q Consensus 92 ~~~~~~~~~~~l~~~r~~~~~~~~~~kw~e~~~~~~d~~~~~~~--y~~~d~l 142 (503)
=|.|++..++-|-.+.+ +.|.|| |+||++-
T Consensus 84 E~kIq~RIK~gLNSkmP---------------------sRFPpvvFYtPKElG 115 (135)
T PF10597_consen 84 ENKIQNRIKIGLNSKMP---------------------SRFPPVVFYTPKELG 115 (135)
T ss_pred HHHHHHHHHHHhcccCC---------------------CCCCCeeecChhhcc
Confidence 55555555544422222 567788 9999874
No 25
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=45.68 E-value=27 Score=32.32 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=29.1
Q ss_pred ccchHHHHHHHhhCCCCChhhHHHHHHHHHHhhc
Q psy7828 12 SHHSMTLFQRLVVSPCIKESDFKSTLLESIKNVG 45 (503)
Q Consensus 12 ~~~~~~~~q~~~~~~~v~~~~~~~~l~~~~~~~g 45 (503)
.|-|.+++.+++++|+|+.+ +|+.|++.++..|
T Consensus 108 r~vs~~ai~~iL~~p~V~~~-~K~~i~~i~~~Kg 140 (155)
T PF10777_consen 108 RFVSDQAIDKILQSPQVPDE-IKQGIQRIISTKG 140 (155)
T ss_pred ccCCHHHHHHHHcCCCCCHH-HHHHHHHHHHhCC
Confidence 46688999999999999876 9999999998876
No 26
>KOG2197|consensus
Probab=43.21 E-value=17 Score=40.13 Aligned_cols=30 Identities=20% Similarity=0.413 Sum_probs=25.6
Q ss_pred HHHHhhhhcCCCcchHHHHHHHhhCCCCCC
Q psy7828 224 PVAQEFLKKGSPRCLRGKIWCQVLGSEATP 253 (503)
Q Consensus 224 ~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~ 253 (503)
..++....+||++++|+++|..|+|+....
T Consensus 68 ~~l~~i~~~gi~psir~evw~fll~~y~~~ 97 (488)
T KOG2197|consen 68 KLLKLIILGGIDPSIRGEVWEFLLGCYDLD 97 (488)
T ss_pred hhheeeecCCCCCcccchhHHHHhcccCCC
Confidence 346677789999999999999999998754
No 27
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=42.03 E-value=42 Score=26.81 Aligned_cols=37 Identities=16% Similarity=0.339 Sum_probs=31.2
Q ss_pred HHHHHHhhCCCCChhhHHHHHHHHHHhhcHHHHHHHH
Q psy7828 17 TLFQRLVVSPCIKESDFKSTLLESIKNVGIETQIRNT 53 (503)
Q Consensus 17 ~~~q~~~~~~~v~~~~~~~~l~~~~~~~g~e~~l~n~ 53 (503)
+.+.+++.+-+.+.++=...++..|+..|++.+|+++
T Consensus 16 ~~ier~~~~~~~~~~e~~~~f~~~L~~~Gv~~~L~~~ 52 (69)
T TIGR03595 16 KKIERWVAKTPFNNDENLRRFARKLKKLGVEDALRKA 52 (69)
T ss_pred hHHHHHHHHcCCCCHHHHHHHHHHHHHCCHHHHHHHc
Confidence 3457777888888888888999999999999999875
No 28
>PF10163 EnY2: Transcription factor e(y)2; InterPro: IPR018783 Enhancer of yellow 2 (EnY2) is a small transcription factor which is combined in a complex with the TAFII40 protein []. This protein is conserved from protozoa to humans.; PDB: 4DHX_C 3FWC_P 3M99_C 3KIK_A 3KJL_C 3FWB_C 3MHS_B 3MHH_B.
Probab=39.31 E-value=54 Score=27.28 Aligned_cols=41 Identities=24% Similarity=0.281 Sum_probs=33.9
Q ss_pred HHHhhCCCCChhhHHHHHHHHHHhhcHHHHHHHHHHHHHHhcC
Q psy7828 20 QRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHK 62 (503)
Q Consensus 20 q~~~~~~~v~~~~~~~~l~~~~~~~g~e~~l~n~v~~~~~~~~ 62 (503)
|+++.| =+.+.+++.|.+-|.++||..++|+.+=..++..+
T Consensus 8 ~~L~~s--Ge~~~L~~~L~~rL~e~GW~d~vr~~~re~i~~~g 48 (86)
T PF10163_consen 8 QRLVES--GEYERLKELLRQRLIECGWRDEVRQLCREIIRERG 48 (86)
T ss_dssp HHHHHC--THHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-
T ss_pred HHHHHc--CcHHHHHHHHHHHHHHCChHHHHHHHHHHHHHhhC
Confidence 556665 35677999999999999999999999988888854
No 29
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=32.43 E-value=45 Score=26.61 Aligned_cols=36 Identities=19% Similarity=0.398 Sum_probs=30.0
Q ss_pred HHHHHhhCCCCChhhHHHHHHHHHHhhcHHHHHHHH
Q psy7828 18 LFQRLVVSPCIKESDFKSTLLESIKNVGIETQIRNT 53 (503)
Q Consensus 18 ~~q~~~~~~~v~~~~~~~~l~~~~~~~g~e~~l~n~ 53 (503)
.+.+++.+-+.+..+=...+++.|+..|++.+|+++
T Consensus 17 ~ie~~~~~~~~~~~e~~~rf~~~L~~~Gv~~~L~~~ 52 (69)
T PF09269_consen 17 KIERLVAMTNFDDEESLRRFQRKLKKMGVEKALRKA 52 (69)
T ss_dssp HHHHHHTTEEE-TGGGHHHHHHHHHHTTHHHHHHTT
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHCCHHHHHHHc
Confidence 456778888888888888999999999999999864
No 30
>KOG1047|consensus
Probab=29.07 E-value=6.8e+02 Score=28.31 Aligned_cols=51 Identities=16% Similarity=0.279 Sum_probs=35.8
Q ss_pred cccchHHHHHHHhhCCCCChhhHHHHHHHHHHhhcHHHHHHHHHHH-HHHhcC
Q psy7828 11 FSHHSMTLFQRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFH-WMRSHK 62 (503)
Q Consensus 11 ~~~~~~~~~q~~~~~~~v~~~~~~~~l~~~~~~~g~e~~l~n~v~~-~~~~~~ 62 (503)
|+--...=++|. +-..|..+||+++|-+++.+.+-...+-+.-|. |++.-|
T Consensus 402 Fd~FLr~Yv~kf-a~ksI~t~dfld~Lye~fpe~kk~dil~~vd~~~Wl~~~G 453 (613)
T KOG1047|consen 402 FDPFLRAYVHKF-AFKSILTQDFLDFLYEYFPELKKKDILDEVDWDLWLNSPG 453 (613)
T ss_pred HHHHHHHHHHHh-ccceecHHHHHHHHHHhCcchhhhhhhccccHHHHhcCCC
Confidence 333333344555 667899999999999999998776666655554 777765
No 31
>COG0191 Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=22.50 E-value=1.5e+02 Score=30.52 Aligned_cols=80 Identities=15% Similarity=0.253 Sum_probs=63.9
Q ss_pred chHHHHHHHhhCC-------CCChhhHHHHHHHHHHhhcHHHHHHHHHHHHHHhcCCCCCCCCCCChHHHHHHHHHHHHH
Q psy7828 14 HSMTLFQRLVVSP-------CIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWAEPLTYLRKAQFQWEK 86 (503)
Q Consensus 14 ~~~~~~q~~~~~~-------~v~~~~~~~~l~~~~~~~g~e~~l~n~v~~~~~~~~~~~~~~~~~~pl~~~~~a~~~w~~ 86 (503)
-+.+++|+.+.-| -|..+++++.|.-=...-++.|.+|.+-..-+|..- .-.+..++|=.|++.|+.+=.+
T Consensus 194 ~~L~~i~~~~~~PlVlHGgSGip~~eI~~aI~~GV~KvNi~Td~~~A~~~avr~~~--~~~~k~~DpR~~l~~a~~am~~ 271 (286)
T COG0191 194 DRLKEIQEAVSLPLVLHGGSGIPDEEIREAIKLGVAKVNIDTDLQLAFTAAVREYL--AENPKEYDPRKYLKPAIEAMKE 271 (286)
T ss_pred HHHHHHHHHhCCCEEEeCCCCCCHHHHHHHHHhCceEEeeCcHHHHHHHHHHHHHH--HhCcccCCHHHHHHHHHHHHHH
Confidence 4567778887755 456777777777777788899999999988888873 2234789999999999999999
Q ss_pred HHHHHHHHH
Q psy7828 87 RIQKSLNSM 95 (503)
Q Consensus 87 ~~~~~~~~~ 95 (503)
++.++++-+
T Consensus 272 ~v~~~~~~f 280 (286)
T COG0191 272 VVKEKIKEF 280 (286)
T ss_pred HHHHHHHHh
Confidence 999988754
Done!