Query psy7829
Match_columns 511
No_of_seqs 753 out of 5742
Neff 9.6
Searched_HMMs 29240
Date Fri Aug 16 19:57:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7829.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7829hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1r18_A Protein-L-isoaspartate( 100.0 2.5E-27 8.7E-32 220.7 19.5 218 54-271 5-227 (227)
2 2pbf_A Protein-L-isoaspartate 99.9 3.7E-26 1.3E-30 212.8 19.5 216 56-273 3-226 (227)
3 1i1n_A Protein-L-isoaspartate 99.9 1.4E-25 4.8E-30 208.7 21.9 221 58-278 2-222 (226)
4 3lbf_A Protein-L-isoaspartate 99.9 5.4E-23 1.9E-27 188.9 20.8 197 65-275 8-208 (210)
5 1jg1_A PIMT;, protein-L-isoasp 99.9 1.8E-22 6E-27 188.9 21.5 207 62-278 18-228 (235)
6 2yxe_A Protein-L-isoaspartate 99.9 4.3E-22 1.5E-26 183.6 20.7 201 64-275 6-211 (215)
7 1dl5_A Protein-L-isoaspartate 99.9 2.1E-20 7.1E-25 182.6 19.2 200 65-274 2-211 (317)
8 1vbf_A 231AA long hypothetical 99.8 2.6E-19 9E-24 166.8 16.0 179 80-272 13-197 (231)
9 3v97_A Ribosomal RNA large sub 99.7 7.7E-16 2.6E-20 164.7 18.1 119 115-239 174-348 (703)
10 4gek_A TRNA (CMO5U34)-methyltr 99.7 7E-16 2.4E-20 145.6 14.3 113 119-237 56-177 (261)
11 3njr_A Precorrin-6Y methylase; 99.6 1.7E-14 5.8E-19 131.2 17.3 119 113-240 37-156 (204)
12 3hm2_A Precorrin-6Y C5,15-meth 99.6 1.3E-14 4.5E-19 128.9 13.9 119 113-239 7-128 (178)
13 3e05_A Precorrin-6Y C5,15-meth 99.6 2E-14 6.9E-19 130.8 15.4 117 115-239 24-143 (204)
14 4df3_A Fibrillarin-like rRNA/T 99.6 8.2E-15 2.8E-19 134.3 12.7 113 119-238 62-182 (233)
15 1nkv_A Hypothetical protein YJ 99.6 2.6E-14 9E-19 134.9 13.9 114 116-238 21-140 (256)
16 3eey_A Putative rRNA methylase 99.6 2.3E-14 7.8E-19 129.7 12.1 105 131-239 20-140 (197)
17 3fpf_A Mtnas, putative unchara 99.5 4.6E-14 1.6E-18 133.2 14.3 101 130-238 119-222 (298)
18 1nv8_A HEMK protein; class I a 99.5 2.4E-14 8.1E-19 136.9 12.4 134 99-242 88-253 (284)
19 3mti_A RRNA methylase; SAM-dep 99.5 5.3E-14 1.8E-18 125.9 12.3 111 121-239 10-136 (185)
20 3dr5_A Putative O-methyltransf 99.5 2.9E-14 9.8E-19 131.2 10.8 100 133-236 56-161 (221)
21 2b25_A Hypothetical protein; s 99.5 4.9E-14 1.7E-18 138.7 13.1 139 100-240 74-221 (336)
22 3jwh_A HEN1; methyltransferase 99.5 8E-14 2.7E-18 128.2 13.5 118 118-238 16-141 (217)
23 3dh0_A SAM dependent methyltra 99.5 8.8E-14 3E-18 128.0 13.6 112 121-239 27-144 (219)
24 3ntv_A MW1564 protein; rossman 99.5 4.2E-14 1.4E-18 131.4 11.1 115 115-236 55-174 (232)
25 3mb5_A SAM-dependent methyltra 99.5 1.6E-13 5.4E-18 129.5 15.0 118 115-239 77-195 (255)
26 3f4k_A Putative methyltransfer 99.5 9.8E-14 3.4E-18 131.0 13.4 113 119-238 33-150 (257)
27 3kkz_A Uncharacterized protein 99.5 8.2E-14 2.8E-18 132.5 12.8 113 119-238 33-150 (267)
28 3bus_A REBM, methyltransferase 99.5 1.5E-13 5.1E-18 131.0 14.5 112 119-238 49-166 (273)
29 3hem_A Cyclopropane-fatty-acyl 99.5 1.6E-13 5.5E-18 132.9 14.9 108 121-239 62-184 (302)
30 3id6_C Fibrillarin-like rRNA/T 99.5 1.3E-13 4.6E-18 126.6 13.5 115 118-239 60-182 (232)
31 4hg2_A Methyltransferase type 99.5 1.9E-14 6.4E-19 135.3 7.9 102 124-239 30-136 (257)
32 3dlc_A Putative S-adenosyl-L-m 99.5 9E-14 3.1E-18 127.7 12.4 112 118-238 31-148 (219)
33 1pjz_A Thiopurine S-methyltran 99.5 3.6E-14 1.2E-18 129.0 9.6 116 116-237 8-139 (203)
34 2b3t_A Protein methyltransfera 99.5 1E-13 3.4E-18 132.5 13.1 132 100-239 76-239 (276)
35 3evz_A Methyltransferase; NYSG 99.5 1.5E-13 5.1E-18 127.5 13.7 102 130-239 52-180 (230)
36 3jwg_A HEN1, methyltransferase 99.5 1.3E-13 4.3E-18 127.0 13.1 118 117-237 15-140 (219)
37 1yzh_A TRNA (guanine-N(7)-)-me 99.5 2.2E-13 7.5E-18 124.9 14.6 102 132-239 40-157 (214)
38 1vl5_A Unknown conserved prote 99.5 1.1E-13 3.7E-18 131.0 12.9 108 121-238 27-140 (260)
39 1ixk_A Methyltransferase; open 99.5 1.9E-14 6.4E-19 139.9 7.5 178 48-239 39-247 (315)
40 1xxl_A YCGJ protein; structura 99.5 1.6E-13 5.6E-18 128.1 13.4 113 117-239 7-125 (239)
41 3kr9_A SAM-dependent methyltra 99.5 5.7E-14 1.9E-18 128.0 9.8 109 125-238 7-119 (225)
42 2o57_A Putative sarcosine dime 99.5 2.1E-13 7.1E-18 131.8 14.3 114 119-238 66-187 (297)
43 1i9g_A Hypothetical protein RV 99.5 1.8E-13 6E-18 131.1 13.7 125 111-240 79-205 (280)
44 2gb4_A Thiopurine S-methyltran 99.5 1.3E-13 4.5E-18 129.3 12.0 117 116-237 53-190 (252)
45 3p9n_A Possible methyltransfer 99.5 2.6E-13 9E-18 121.8 13.2 117 118-241 28-156 (189)
46 1nt2_A Fibrillarin-like PRE-rR 99.5 2.3E-13 7.8E-18 124.2 12.9 100 131-238 55-161 (210)
47 3lec_A NADB-rossmann superfami 99.5 8.4E-14 2.9E-18 127.0 9.8 109 125-238 13-125 (230)
48 3dxy_A TRNA (guanine-N(7)-)-me 99.5 1E-13 3.5E-18 127.3 10.2 102 132-239 33-151 (218)
49 3tfw_A Putative O-methyltransf 99.5 2.5E-13 8.5E-18 127.5 12.9 103 131-237 61-169 (248)
50 2pwy_A TRNA (adenine-N(1)-)-me 99.5 6.1E-13 2.1E-17 125.6 15.7 122 112-240 77-200 (258)
51 3dtn_A Putative methyltransfer 99.5 2.8E-13 9.5E-18 126.0 13.1 100 131-239 42-149 (234)
52 3ujc_A Phosphoethanolamine N-m 99.5 1.6E-13 5.4E-18 130.2 11.4 109 119-238 43-159 (266)
53 2fca_A TRNA (guanine-N(7)-)-me 99.5 2.7E-13 9.3E-18 124.1 12.2 102 132-239 37-154 (213)
54 3vc1_A Geranyl diphosphate 2-C 99.5 2.9E-13 1E-17 131.7 13.2 103 131-239 115-222 (312)
55 3gnl_A Uncharacterized protein 99.5 1.2E-13 4.2E-18 126.9 9.7 108 125-237 13-124 (244)
56 3u81_A Catechol O-methyltransf 99.5 1.2E-13 4E-18 127.5 9.5 114 117-237 44-169 (221)
57 3ajd_A Putative methyltransfer 99.5 3.3E-14 1.1E-18 135.6 5.7 175 51-239 8-212 (274)
58 2bm8_A Cephalosporin hydroxyla 99.5 9.1E-14 3.1E-18 129.3 8.5 116 110-237 59-186 (236)
59 1sui_A Caffeoyl-COA O-methyltr 99.5 1.9E-13 6.5E-18 128.0 10.4 103 131-237 77-189 (247)
60 3duw_A OMT, O-methyltransferas 99.5 1.8E-13 6.1E-18 126.4 10.0 103 131-237 56-166 (223)
61 2gpy_A O-methyltransferase; st 99.5 1.3E-13 4.6E-18 128.2 9.2 117 114-237 37-159 (233)
62 3r3h_A O-methyltransferase, SA 99.4 3E-14 1E-18 133.1 4.5 103 131-237 58-169 (242)
63 3tma_A Methyltransferase; thum 99.4 7E-13 2.4E-17 131.3 14.5 121 113-240 185-319 (354)
64 3g07_A 7SK snRNA methylphospha 99.4 1.5E-13 5E-18 132.4 9.3 106 131-237 44-219 (292)
65 1o54_A SAM-dependent O-methylt 99.4 7.2E-13 2.5E-17 126.6 13.9 117 116-239 97-214 (277)
66 1kpg_A CFA synthase;, cyclopro 99.4 8.8E-13 3E-17 126.7 14.6 99 131-238 62-168 (287)
67 3gu3_A Methyltransferase; alph 99.4 4.3E-13 1.5E-17 128.6 12.4 114 118-239 8-127 (284)
68 3g5t_A Trans-aconitate 3-methy 99.4 5.3E-13 1.8E-17 129.0 12.9 103 131-237 34-148 (299)
69 3ou2_A SAM-dependent methyltra 99.4 8.2E-13 2.8E-17 121.3 13.5 107 121-241 35-149 (218)
70 4htf_A S-adenosylmethionine-de 99.4 5.7E-13 1.9E-17 127.9 12.8 102 131-239 66-174 (285)
71 1ve3_A Hypothetical protein PH 99.4 1.3E-12 4.6E-17 120.7 14.9 110 121-239 26-143 (227)
72 3mgg_A Methyltransferase; NYSG 99.4 3.9E-13 1.3E-17 128.3 11.6 103 131-239 35-143 (276)
73 2ift_A Putative methylase HI07 99.4 2.6E-13 8.8E-18 123.1 9.6 118 119-242 40-167 (201)
74 1yb2_A Hypothetical protein TA 99.4 6.3E-13 2.2E-17 126.8 12.8 112 121-240 100-213 (275)
75 4dcm_A Ribosomal RNA large sub 99.4 6.3E-13 2.2E-17 131.9 13.0 113 122-240 213-336 (375)
76 3m33_A Uncharacterized protein 99.4 5.2E-13 1.8E-17 123.5 11.7 92 131-235 46-139 (226)
77 1l3i_A Precorrin-6Y methyltran 99.4 8.5E-13 2.9E-17 118.4 12.7 117 114-239 16-135 (192)
78 3ocj_A Putative exported prote 99.4 3.1E-13 1.1E-17 131.0 10.5 107 128-239 113-228 (305)
79 2ozv_A Hypothetical protein AT 99.4 4.8E-13 1.7E-17 126.4 11.5 106 131-241 34-173 (260)
80 4dzr_A Protein-(glutamine-N5) 99.4 3.6E-14 1.2E-18 130.0 3.4 122 110-239 5-166 (215)
81 3l8d_A Methyltransferase; stru 99.4 7.1E-13 2.4E-17 123.9 12.3 106 124-240 44-155 (242)
82 2frx_A Hypothetical protein YE 99.4 8E-13 2.8E-17 134.9 13.5 177 48-239 33-247 (479)
83 1u2z_A Histone-lysine N-methyl 99.4 1.1E-12 3.8E-17 131.2 14.1 122 108-237 221-358 (433)
84 3g89_A Ribosomal RNA small sub 99.4 3.2E-13 1.1E-17 126.5 9.7 103 132-240 79-186 (249)
85 2yqz_A Hypothetical protein TT 99.4 7.7E-13 2.6E-17 125.2 12.5 110 119-237 22-140 (263)
86 3ofk_A Nodulation protein S; N 99.4 4.6E-13 1.6E-17 122.9 10.6 98 131-239 49-155 (216)
87 3ckk_A TRNA (guanine-N(7)-)-me 99.4 5.9E-13 2E-17 123.6 11.2 108 131-239 44-169 (235)
88 2hnk_A SAM-dependent O-methylt 99.4 2.3E-13 8E-18 127.0 8.5 119 114-238 43-181 (239)
89 3tr6_A O-methyltransferase; ce 99.4 2.1E-13 7E-18 126.1 8.0 103 131-237 62-173 (225)
90 3bkx_A SAM-dependent methyltra 99.4 1.1E-12 3.9E-17 125.0 13.5 115 119-239 31-160 (275)
91 2frn_A Hypothetical protein PH 99.4 8.5E-13 2.9E-17 126.0 12.5 102 131-239 123-226 (278)
92 3uwp_A Histone-lysine N-methyl 99.4 7.3E-13 2.5E-17 129.6 11.9 115 117-237 159-287 (438)
93 3m6w_A RRNA methylase; rRNA me 99.4 3.3E-14 1.1E-18 143.6 2.6 169 52-238 30-229 (464)
94 2yvl_A TRMI protein, hypotheti 99.4 3.7E-12 1.3E-16 119.5 16.5 118 114-240 74-192 (248)
95 2yxl_A PH0851 protein, 450AA l 99.4 2E-13 6.8E-18 139.3 8.3 176 50-239 183-390 (450)
96 3hnr_A Probable methyltransfer 99.4 1.2E-12 4.2E-17 120.3 12.9 104 121-239 35-146 (220)
97 3grz_A L11 mtase, ribosomal pr 99.4 7.9E-13 2.7E-17 120.3 11.2 110 119-237 46-158 (205)
98 1dus_A MJ0882; hypothetical pr 99.4 2.1E-12 7.3E-17 116.0 14.0 112 119-241 40-160 (194)
99 1jsx_A Glucose-inhibited divis 99.4 9.2E-13 3.1E-17 120.0 11.6 116 119-241 50-168 (207)
100 2p7i_A Hypothetical protein; p 99.4 7.1E-13 2.4E-17 124.3 11.1 107 119-239 29-142 (250)
101 3fzg_A 16S rRNA methylase; met 99.4 3.2E-13 1.1E-17 117.8 7.9 99 130-236 46-150 (200)
102 3lpm_A Putative methyltransfer 99.4 6.1E-13 2.1E-17 125.8 10.6 104 131-240 46-178 (259)
103 2p35_A Trans-aconitate 2-methy 99.4 6.3E-13 2.2E-17 125.6 10.8 105 121-239 23-133 (259)
104 4fsd_A Arsenic methyltransfera 99.4 7.6E-13 2.6E-17 132.4 11.8 106 131-238 81-203 (383)
105 2xvm_A Tellurite resistance pr 99.4 1.6E-12 5.6E-17 117.4 13.0 105 123-238 24-136 (199)
106 2esr_A Methyltransferase; stru 99.4 4.8E-13 1.6E-17 118.7 9.1 119 119-244 18-144 (177)
107 2p8j_A S-adenosylmethionine-de 99.4 9.5E-13 3.3E-17 120.0 11.2 113 120-241 11-131 (209)
108 2fpo_A Methylase YHHF; structu 99.4 7E-13 2.4E-17 120.3 10.2 116 119-242 41-164 (202)
109 1ws6_A Methyltransferase; stru 99.4 7.1E-13 2.4E-17 116.7 10.0 119 117-244 25-153 (171)
110 3c3p_A Methyltransferase; NP_9 99.4 6.8E-13 2.3E-17 121.2 10.1 101 132-237 55-159 (210)
111 2fk8_A Methoxy mycolic acid sy 99.4 2.2E-12 7.6E-17 125.8 14.4 100 131-239 88-195 (318)
112 2fhp_A Methylase, putative; al 99.4 5.6E-13 1.9E-17 119.3 9.3 120 117-243 29-159 (187)
113 3c3y_A Pfomt, O-methyltransfer 99.4 5.7E-13 1.9E-17 124.1 9.6 103 131-237 68-180 (237)
114 2pxx_A Uncharacterized protein 99.4 1.3E-12 4.3E-17 119.7 11.8 109 123-240 32-161 (215)
115 1zx0_A Guanidinoacetate N-meth 99.4 5.1E-13 1.7E-17 124.5 9.1 99 131-237 58-169 (236)
116 3dmg_A Probable ribosomal RNA 99.4 1.6E-12 5.4E-17 129.1 13.2 101 132-241 232-343 (381)
117 1g8a_A Fibrillarin-like PRE-rR 99.4 1.2E-12 4.1E-17 121.2 11.4 102 131-239 71-179 (227)
118 1xtp_A LMAJ004091AAA; SGPP, st 99.4 2.3E-12 7.9E-17 121.3 13.4 100 131-239 91-198 (254)
119 3lcc_A Putative methyl chlorid 99.4 1.2E-12 4E-17 121.9 11.2 100 133-240 66-173 (235)
120 3orh_A Guanidinoacetate N-meth 99.4 4.6E-13 1.6E-17 124.7 8.3 98 131-236 58-168 (236)
121 1sqg_A SUN protein, FMU protei 99.4 8.6E-13 2.9E-17 133.9 11.0 174 49-238 169-374 (429)
122 1xdz_A Methyltransferase GIDB; 99.4 5.7E-13 2E-17 124.4 8.8 102 132-239 69-175 (240)
123 1fbn_A MJ fibrillarin homologu 99.4 1.3E-12 4.4E-17 121.2 11.1 99 131-238 72-178 (230)
124 3iv6_A Putative Zn-dependent a 99.4 9.1E-13 3.1E-17 123.3 10.0 108 119-240 33-150 (261)
125 3a27_A TYW2, uncharacterized p 99.4 2.2E-12 7.7E-17 122.6 12.9 105 130-241 116-222 (272)
126 3g5l_A Putative S-adenosylmeth 99.4 1.2E-12 3.9E-17 123.4 10.6 98 132-239 43-146 (253)
127 3sm3_A SAM-dependent methyltra 99.4 2.6E-12 9E-17 119.3 12.8 106 131-239 28-142 (235)
128 3bgv_A MRNA CAP guanine-N7 met 99.4 9.1E-13 3.1E-17 128.3 9.8 120 119-240 20-157 (313)
129 2h00_A Methyltransferase 10 do 99.4 5.7E-13 2E-17 125.6 8.1 99 133-236 65-190 (254)
130 3m70_A Tellurite resistance pr 99.4 2.8E-12 9.6E-17 123.1 13.0 105 123-239 112-224 (286)
131 3h2b_A SAM-dependent methyltra 99.4 5.8E-13 2E-17 120.9 7.8 96 134-242 42-145 (203)
132 3pfg_A N-methyltransferase; N, 99.4 1.6E-12 5.6E-17 123.1 10.9 105 120-238 37-151 (263)
133 2yxd_A Probable cobalt-precorr 99.4 6E-12 2.1E-16 111.9 13.9 112 114-239 18-132 (183)
134 1ri5_A MRNA capping enzyme; me 99.4 5.4E-12 1.8E-16 121.7 14.6 103 131-239 62-175 (298)
135 2avd_A Catechol-O-methyltransf 99.4 9.8E-13 3.4E-17 121.9 9.0 103 131-237 67-178 (229)
136 2ipx_A RRNA 2'-O-methyltransfe 99.4 2.8E-12 9.6E-17 119.2 12.1 102 131-239 75-183 (233)
137 3cbg_A O-methyltransferase; cy 99.4 6.1E-13 2.1E-17 123.5 7.4 103 131-237 70-181 (232)
138 3ccf_A Cyclopropane-fatty-acyl 99.4 2.6E-12 9E-17 122.8 11.8 103 122-240 48-156 (279)
139 2vdv_E TRNA (guanine-N(7)-)-me 99.4 4.1E-12 1.4E-16 119.0 12.5 108 131-239 47-174 (246)
140 2b9e_A NOL1/NOP2/SUN domain fa 99.4 1.7E-12 5.7E-17 125.1 9.8 152 52-217 10-184 (309)
141 3mq2_A 16S rRNA methyltransfer 99.4 4.3E-12 1.5E-16 116.6 12.1 112 123-239 19-141 (218)
142 3d2l_A SAM-dependent methyltra 99.3 4.4E-12 1.5E-16 118.5 12.1 100 130-240 30-139 (243)
143 3e23_A Uncharacterized protein 99.3 3.5E-12 1.2E-16 116.5 11.2 96 130-240 40-143 (211)
144 2ex4_A Adrenal gland protein A 99.3 1.8E-12 6.2E-17 121.1 9.4 100 133-239 79-186 (241)
145 3bkw_A MLL3908 protein, S-aden 99.3 3.5E-12 1.2E-16 119.1 11.3 105 123-239 35-145 (243)
146 3ege_A Putative methyltransfer 99.3 2.4E-12 8.3E-17 121.8 10.0 107 116-239 19-131 (261)
147 2gs9_A Hypothetical protein TT 99.3 5.7E-12 1.9E-16 115.1 12.2 103 124-241 27-135 (211)
148 3htx_A HEN1; HEN1, small RNA m 99.3 7.2E-12 2.5E-16 131.5 14.3 117 120-239 710-835 (950)
149 1p91_A Ribosomal RNA large sub 99.3 7.2E-12 2.5E-16 119.1 13.0 108 123-242 74-182 (269)
150 1o9g_A RRNA methyltransferase; 99.3 1.6E-12 5.5E-17 122.2 8.1 101 133-239 51-214 (250)
151 1y8c_A S-adenosylmethionine-de 99.3 6E-12 2E-16 117.7 11.9 112 119-240 23-144 (246)
152 2kw5_A SLR1183 protein; struct 99.3 1.1E-11 3.7E-16 112.4 13.1 102 131-242 28-135 (202)
153 3p2e_A 16S rRNA methylase; met 99.3 2.6E-12 8.8E-17 118.5 8.8 102 131-238 22-139 (225)
154 3adn_A Spermidine synthase; am 99.3 4.4E-12 1.5E-16 121.4 10.8 107 132-239 82-199 (294)
155 3m4x_A NOL1/NOP2/SUN family pr 99.3 2E-12 6.7E-17 130.6 8.2 103 131-238 103-234 (456)
156 2nxc_A L11 mtase, ribosomal pr 99.3 3.7E-12 1.3E-16 119.8 9.0 107 121-237 108-217 (254)
157 3gdh_A Trimethylguanosine synt 99.3 5.5E-13 1.9E-17 124.6 3.2 109 120-237 66-180 (241)
158 3dli_A Methyltransferase; PSI- 99.3 4.1E-12 1.4E-16 118.6 9.0 95 130-240 38-142 (240)
159 3g2m_A PCZA361.24; SAM-depende 99.3 8.4E-12 2.9E-16 120.6 10.9 114 119-241 71-193 (299)
160 3i9f_A Putative type 11 methyl 99.3 5.8E-12 2E-16 110.8 8.9 99 123-239 9-113 (170)
161 1wzn_A SAM-dependent methyltra 99.3 1.9E-11 6.5E-16 114.9 13.1 98 132-239 40-146 (252)
162 3thr_A Glycine N-methyltransfe 99.3 4.8E-12 1.6E-16 121.9 9.1 115 119-239 45-176 (293)
163 3k6r_A Putative transferase PH 99.3 1.1E-11 3.7E-16 117.0 11.2 101 130-237 122-224 (278)
164 4df3_A Fibrillarin-like rRNA/T 99.3 1.1E-11 3.7E-16 113.6 10.9 134 358-500 61-215 (233)
165 2qe6_A Uncharacterized protein 99.3 2.9E-11 9.9E-16 114.9 14.3 113 119-240 64-198 (274)
166 2fyt_A Protein arginine N-meth 99.3 9.4E-12 3.2E-16 122.2 11.2 98 131-235 62-168 (340)
167 2pjd_A Ribosomal RNA small sub 99.3 7.4E-12 2.5E-16 123.3 10.5 109 120-239 185-304 (343)
168 2a14_A Indolethylamine N-methy 99.3 2.9E-12 1E-16 121.3 7.3 106 131-239 53-198 (263)
169 4dcm_A Ribosomal RNA large sub 99.3 1.9E-11 6.4E-16 121.3 13.1 282 133-478 38-333 (375)
170 3q87_B N6 adenine specific DNA 99.3 1.6E-11 5.4E-16 108.1 11.2 106 114-240 5-125 (170)
171 3q7e_A Protein arginine N-meth 99.3 1E-11 3.5E-16 122.4 11.1 99 131-236 64-171 (349)
172 3ggd_A SAM-dependent methyltra 99.3 9E-12 3.1E-16 116.6 10.1 99 130-239 53-164 (245)
173 3dp7_A SAM-dependent methyltra 99.3 2.9E-11 9.8E-16 120.0 14.3 99 132-237 178-286 (363)
174 3gwz_A MMCR; methyltransferase 99.3 3E-11 1E-15 120.2 14.4 99 131-237 200-306 (369)
175 3bxo_A N,N-dimethyltransferase 99.3 1.8E-11 6.2E-16 114.0 12.0 103 122-238 29-141 (239)
176 2vdw_A Vaccinia virus capping 99.3 1.1E-11 3.7E-16 119.5 10.7 105 133-239 48-170 (302)
177 3cgg_A SAM-dependent methyltra 99.3 2.2E-11 7.5E-16 109.4 11.9 97 131-240 44-149 (195)
178 2aot_A HMT, histamine N-methyl 99.3 5.9E-12 2E-16 121.2 8.3 104 132-239 51-173 (292)
179 2plw_A Ribosomal RNA methyltra 99.3 2.3E-11 7.8E-16 110.1 11.8 95 131-241 20-157 (201)
180 2avn_A Ubiquinone/menaquinone 99.3 2E-11 6.8E-16 115.4 11.8 102 124-239 45-153 (260)
181 1xj5_A Spermidine synthase 1; 99.3 9.2E-12 3.2E-16 121.3 9.6 104 132-239 119-236 (334)
182 2igt_A SAM dependent methyltra 99.3 1.3E-11 4.3E-16 120.4 10.6 116 119-241 140-275 (332)
183 1af7_A Chemotaxis receptor met 99.3 6.2E-11 2.1E-15 111.9 14.3 105 133-237 105-251 (274)
184 2y1w_A Histone-arginine methyl 99.3 2E-11 6.8E-16 120.3 11.4 106 122-237 41-154 (348)
185 2r3s_A Uncharacterized protein 99.3 3E-11 1E-15 118.7 12.6 108 122-238 154-271 (335)
186 2g72_A Phenylethanolamine N-me 99.2 1.3E-11 4.5E-16 118.5 9.6 117 119-237 57-214 (289)
187 3i53_A O-methyltransferase; CO 99.2 2.9E-11 9.8E-16 118.6 12.1 99 132-238 168-274 (332)
188 3gjy_A Spermidine synthase; AP 99.2 1.4E-11 4.9E-16 117.8 9.6 100 135-240 91-202 (317)
189 1g6q_1 HnRNP arginine N-methyl 99.2 3.3E-11 1.1E-15 117.8 12.3 99 131-236 36-143 (328)
190 3e8s_A Putative SAM dependent 99.2 1.9E-11 6.6E-16 112.7 10.1 105 121-241 42-155 (227)
191 3r0q_C Probable protein argini 99.2 1.9E-11 6.5E-16 121.7 10.6 98 131-236 61-167 (376)
192 1qzz_A RDMB, aclacinomycin-10- 99.2 3.1E-11 1.1E-15 120.5 12.2 100 131-238 180-287 (374)
193 3e05_A Precorrin-6Y C5,15-meth 99.2 1.2E-10 4.1E-15 105.7 14.9 128 356-494 24-160 (204)
194 2qm3_A Predicted methyltransfe 99.2 1.4E-10 4.7E-15 115.4 16.5 102 132-240 171-280 (373)
195 1x19_A CRTF-related protein; m 99.2 6.1E-11 2.1E-15 117.6 13.9 108 121-238 180-295 (359)
196 3mcz_A O-methyltransferase; ad 99.2 2.6E-11 8.8E-16 120.0 10.4 102 131-238 176-287 (352)
197 2i62_A Nicotinamide N-methyltr 99.2 2.1E-11 7.3E-16 115.4 9.1 107 131-239 54-199 (265)
198 2ip2_A Probable phenazine-spec 99.2 4E-11 1.4E-15 117.7 11.3 99 131-238 166-272 (334)
199 1ej0_A FTSJ; methyltransferase 99.2 2.4E-11 8.1E-16 107.4 8.6 96 131-242 20-140 (180)
200 1tw3_A COMT, carminomycin 4-O- 99.2 5.8E-11 2E-15 117.8 12.4 100 131-238 181-288 (360)
201 3tm4_A TRNA (guanine N2-)-meth 99.2 5.6E-11 1.9E-15 118.1 12.2 114 116-239 203-330 (373)
202 1inl_A Spermidine synthase; be 99.2 2.9E-11 1E-15 116.2 9.8 107 132-240 89-207 (296)
203 2o07_A Spermidine synthase; st 99.2 3.2E-11 1.1E-15 116.1 9.9 104 132-239 94-210 (304)
204 1iy9_A Spermidine synthase; ro 99.2 4.4E-11 1.5E-15 113.7 10.7 106 132-239 74-190 (275)
205 3b3j_A Histone-arginine methyl 99.2 3.1E-11 1.1E-15 123.5 9.6 99 131-237 156-262 (480)
206 1mjf_A Spermidine synthase; sp 99.2 2.4E-11 8.3E-16 115.9 8.3 106 131-240 73-195 (281)
207 1zq9_A Probable dimethyladenos 99.2 5.3E-11 1.8E-15 113.8 10.6 111 115-236 12-145 (285)
208 3bwc_A Spermidine synthase; SA 99.2 4.5E-11 1.5E-15 115.4 10.2 106 132-239 94-211 (304)
209 3gru_A Dimethyladenosine trans 99.2 9.1E-11 3.1E-15 111.8 11.5 106 113-230 32-137 (295)
210 2pt6_A Spermidine synthase; tr 99.2 3.5E-11 1.2E-15 116.8 8.7 107 132-240 115-232 (321)
211 4hc4_A Protein arginine N-meth 99.2 6.6E-11 2.3E-15 116.4 10.8 97 132-236 82-187 (376)
212 2b78_A Hypothetical protein SM 99.2 4.9E-11 1.7E-15 119.0 10.0 105 132-242 211-335 (385)
213 3mb5_A SAM-dependent methyltra 99.2 1.4E-10 4.6E-15 109.3 12.1 134 354-499 76-219 (255)
214 3bzb_A Uncharacterized protein 99.2 2.2E-10 7.5E-15 109.4 13.7 107 132-240 78-207 (281)
215 2b2c_A Spermidine synthase; be 99.2 4.6E-11 1.6E-15 115.4 8.6 106 132-239 107-223 (314)
216 1uir_A Polyamine aminopropyltr 99.2 5.2E-11 1.8E-15 115.4 9.0 107 132-239 76-196 (314)
217 2yx1_A Hypothetical protein MJ 99.2 1.9E-10 6.5E-15 112.6 12.7 98 131-239 193-292 (336)
218 1vlm_A SAM-dependent methyltra 99.1 1.2E-10 4.1E-15 107.0 10.1 89 133-240 47-141 (219)
219 4dmg_A Putative uncharacterize 99.1 6.1E-11 2.1E-15 118.0 8.7 100 131-239 212-327 (393)
220 3dou_A Ribosomal RNA large sub 99.1 1.1E-10 3.7E-15 104.7 9.5 93 131-242 23-143 (191)
221 1uwv_A 23S rRNA (uracil-5-)-me 99.1 4.4E-10 1.5E-14 114.0 14.3 128 103-241 253-392 (433)
222 3c0k_A UPF0064 protein YCCW; P 99.1 5.5E-11 1.9E-15 119.4 7.5 104 132-241 219-342 (396)
223 1wxx_A TT1595, hypothetical pr 99.1 5E-11 1.7E-15 119.0 6.9 100 133-240 209-327 (382)
224 3k0b_A Predicted N6-adenine-sp 99.1 5.9E-10 2E-14 111.0 14.6 120 114-240 184-352 (393)
225 3cc8_A Putative methyltransfer 99.1 1.4E-10 4.9E-15 107.0 9.5 94 132-240 31-132 (230)
226 3opn_A Putative hemolysin; str 99.1 1.6E-11 5.4E-16 113.5 2.8 111 121-238 26-137 (232)
227 3giw_A Protein of unknown func 99.1 1.6E-10 5.4E-15 107.8 9.5 117 119-241 65-203 (277)
228 3sso_A Methyltransferase; macr 99.1 6E-11 2E-15 115.9 6.8 92 131-237 214-323 (419)
229 2cmg_A Spermidine synthase; tr 99.1 1.1E-10 3.7E-15 109.9 8.4 102 132-240 71-173 (262)
230 2jjq_A Uncharacterized RNA met 99.1 4.1E-10 1.4E-14 113.3 13.1 111 119-241 277-390 (425)
231 3lst_A CALO1 methyltransferase 99.1 1.2E-10 4.2E-15 114.8 9.1 97 131-238 182-286 (348)
232 2i7c_A Spermidine synthase; tr 99.1 1.1E-10 3.7E-15 111.5 8.4 106 132-239 77-193 (283)
233 2as0_A Hypothetical protein PH 99.1 1.1E-10 3.8E-15 117.2 8.8 103 131-239 215-336 (396)
234 2f8l_A Hypothetical protein LM 99.1 3.9E-10 1.3E-14 111.0 12.5 101 132-239 129-257 (344)
235 2pwy_A TRNA (adenine-N(1)-)-me 99.1 3.8E-10 1.3E-14 106.3 11.4 130 353-494 78-216 (258)
236 3hp7_A Hemolysin, putative; st 99.1 1.7E-10 6E-15 109.1 9.0 95 133-239 85-186 (291)
237 2nyu_A Putative ribosomal RNA 99.1 3.7E-10 1.3E-14 101.6 10.5 95 131-241 20-148 (196)
238 3ldg_A Putative uncharacterize 99.1 1.3E-09 4.5E-14 107.9 15.4 119 116-241 179-346 (384)
239 3ldu_A Putative methylase; str 99.1 6.6E-10 2.2E-14 110.5 13.2 118 116-240 180-346 (385)
240 3lcv_B Sisomicin-gentamicin re 99.1 2.2E-10 7.6E-15 104.6 8.9 99 130-236 129-234 (281)
241 3fpf_A Mtnas, putative unchara 99.1 5.3E-10 1.8E-14 105.5 11.4 100 369-478 118-221 (298)
242 3njr_A Precorrin-6Y methylase; 99.1 1.8E-09 6.3E-14 97.8 14.6 126 354-494 37-172 (204)
243 3v97_A Ribosomal RNA large sub 99.1 4.2E-10 1.4E-14 120.4 11.9 104 132-240 538-659 (703)
244 3bt7_A TRNA (uracil-5-)-methyl 99.1 2.4E-10 8E-15 113.5 9.0 97 133-237 213-325 (369)
245 3id6_C Fibrillarin-like rRNA/T 99.1 3.5E-10 1.2E-14 103.8 9.4 115 356-478 58-180 (232)
246 1i9g_A Hypothetical protein RV 99.1 7.3E-10 2.5E-14 105.8 12.0 112 355-478 83-202 (280)
247 2h1r_A Dimethyladenosine trans 99.1 4.1E-10 1.4E-14 108.3 10.1 105 115-231 26-130 (299)
248 1o54_A SAM-dependent O-methylt 99.1 6.9E-10 2.4E-14 105.8 11.2 133 354-498 95-235 (277)
249 1wy7_A Hypothetical protein PH 99.0 5.1E-09 1.7E-13 95.0 16.3 109 116-238 31-148 (207)
250 3cvo_A Methyltransferase-like 99.0 2.9E-09 9.9E-14 94.9 14.2 98 131-236 28-152 (202)
251 3dr5_A Putative O-methyltransf 99.0 2.6E-10 8.8E-15 104.7 7.5 99 372-478 55-162 (221)
252 3hm2_A Precorrin-6Y C5,15-meth 99.0 1.1E-09 3.6E-14 96.8 11.3 130 353-494 6-145 (178)
253 4a6d_A Hydroxyindole O-methylt 99.0 9.9E-10 3.4E-14 108.4 12.0 98 131-237 177-282 (353)
254 1ne2_A Hypothetical protein TA 99.0 1.4E-09 4.9E-14 98.1 11.9 103 119-239 36-147 (200)
255 1yb2_A Hypothetical protein TA 99.0 4.3E-10 1.5E-14 107.0 8.6 125 358-494 97-229 (275)
256 3frh_A 16S rRNA methylase; met 99.0 2E-09 6.9E-14 97.5 12.3 93 132-235 104-203 (253)
257 4azs_A Methyltransferase WBDD; 99.0 3.2E-10 1.1E-14 119.1 7.6 98 131-236 64-171 (569)
258 2oxt_A Nucleoside-2'-O-methylt 99.0 1.8E-10 6.2E-15 108.4 5.0 101 130-240 71-187 (265)
259 2b25_A Hypothetical protein; s 99.0 7.5E-10 2.5E-14 108.7 9.5 112 355-478 89-218 (336)
260 2okc_A Type I restriction enzy 99.0 1.2E-09 4.1E-14 111.2 11.4 123 111-239 151-308 (445)
261 2dul_A N(2),N(2)-dimethylguano 99.0 4.7E-10 1.6E-14 111.0 7.8 100 133-238 47-164 (378)
262 4e2x_A TCAB9; kijanose, tetron 99.0 6.8E-11 2.3E-15 119.8 1.8 97 131-239 105-209 (416)
263 1nt2_A Fibrillarin-like PRE-rR 99.0 4.8E-10 1.6E-14 102.1 7.2 102 369-478 53-160 (210)
264 2wa2_A Non-structural protein 99.0 1.4E-10 4.9E-15 109.7 3.6 100 131-240 80-195 (276)
265 3tqs_A Ribosomal RNA small sub 99.0 7.3E-10 2.5E-14 103.5 8.3 103 114-229 12-118 (255)
266 2ih2_A Modification methylase 99.0 9.1E-10 3.1E-14 111.6 9.3 110 114-240 22-166 (421)
267 1nkv_A Hypothetical protein YJ 99.0 6.3E-10 2.1E-14 104.7 7.2 148 347-503 12-188 (256)
268 3axs_A Probable N(2),N(2)-dime 99.0 7.8E-10 2.7E-14 109.4 8.0 103 132-238 51-158 (392)
269 3mti_A RRNA methylase; SAM-dep 99.0 3.4E-10 1.2E-14 100.9 4.8 107 369-478 18-134 (185)
270 3p9c_A Caffeic acid O-methyltr 99.0 2.4E-09 8.1E-14 106.1 11.3 91 131-237 199-297 (364)
271 4gek_A TRNA (CMO5U34)-methyltr 99.0 4.9E-10 1.7E-14 105.5 5.9 104 369-478 66-177 (261)
272 3reo_A (ISO)eugenol O-methyltr 99.0 2E-09 6.9E-14 106.8 10.5 91 131-237 201-299 (368)
273 2p41_A Type II methyltransfera 99.0 4E-10 1.4E-14 108.4 5.2 98 131-241 80-194 (305)
274 3fut_A Dimethyladenosine trans 99.0 2.5E-09 8.7E-14 100.6 10.6 102 114-229 30-132 (271)
275 2fca_A TRNA (guanine-N(7)-)-me 99.0 1.1E-08 3.8E-13 93.2 14.6 122 372-494 37-171 (213)
276 1yzh_A TRNA (guanine-N(7)-)-me 98.9 3E-09 1E-13 97.2 10.5 122 372-494 40-174 (214)
277 1fp1_D Isoliquiritigenin 2'-O- 98.9 2.4E-09 8.3E-14 106.5 10.5 91 131-237 207-305 (372)
278 3dxy_A TRNA (guanine-N(7)-)-me 98.9 3.6E-09 1.2E-13 96.8 10.7 116 373-491 34-165 (218)
279 2yxd_A Probable cobalt-precorr 98.9 1.2E-08 3.9E-13 90.4 13.7 131 354-501 18-155 (183)
280 4fzv_A Putative methyltransfer 98.9 3.2E-09 1.1E-13 103.6 10.6 108 131-239 146-285 (359)
281 2xyq_A Putative 2'-O-methyl tr 98.9 9.3E-09 3.2E-13 97.5 13.3 91 130-241 60-174 (290)
282 3uwp_A Histone-lysine N-methyl 98.9 1.3E-09 4.6E-14 106.6 7.4 117 353-478 155-287 (438)
283 2qfm_A Spermine synthase; sper 98.9 1.2E-09 4E-14 105.8 6.9 106 133-240 188-316 (364)
284 3eey_A Putative rRNA methylase 98.9 3.2E-09 1.1E-13 95.5 9.3 110 369-478 18-138 (197)
285 1yub_A Ermam, rRNA methyltrans 98.9 4.1E-11 1.4E-15 112.1 -3.4 113 114-239 12-146 (245)
286 3kr9_A SAM-dependent methyltra 98.9 7.5E-10 2.6E-14 100.7 5.0 112 370-494 12-135 (225)
287 1u2z_A Histone-lysine N-methyl 98.9 3.3E-09 1.1E-13 106.1 10.0 117 353-478 224-358 (433)
288 1m6y_A S-adenosyl-methyltransf 98.9 2.5E-09 8.7E-14 102.2 8.8 94 117-219 12-110 (301)
289 3g89_A Ribosomal RNA small sub 98.9 1.4E-09 4.9E-14 101.6 6.9 114 371-494 78-204 (249)
290 3f4k_A Putative methyltransfer 98.9 2.8E-09 9.6E-14 100.2 9.0 123 347-478 21-149 (257)
291 1g8a_A Fibrillarin-like PRE-rR 98.9 2.4E-09 8.1E-14 98.8 8.3 112 357-478 56-177 (227)
292 1qam_A ERMC' methyltransferase 98.9 1.2E-08 4E-13 95.1 12.9 91 115-218 14-105 (244)
293 1fp2_A Isoflavone O-methyltran 98.9 3.4E-09 1.1E-13 104.7 9.7 91 131-237 186-287 (352)
294 2yxe_A Protein-L-isoaspartate 98.9 4.5E-09 1.5E-13 96.0 9.8 111 355-478 61-176 (215)
295 3ntv_A MW1564 protein; rossman 98.9 1.4E-09 4.7E-14 100.7 6.4 110 356-477 56-174 (232)
296 3ckk_A TRNA (guanine-N(7)-)-me 98.9 1.3E-09 4.3E-14 101.0 5.8 123 370-493 43-185 (235)
297 2zfu_A Nucleomethylin, cerebra 98.9 2.6E-09 8.8E-14 97.6 7.8 91 122-239 57-152 (215)
298 1sui_A Caffeoyl-COA O-methyltr 98.9 3.5E-09 1.2E-13 98.9 8.8 100 369-477 75-188 (247)
299 3dmg_A Probable ribosomal RNA 98.9 2.2E-10 7.4E-15 113.7 0.5 104 371-478 231-339 (381)
300 3lbf_A Protein-L-isoaspartate 98.9 4.4E-09 1.5E-13 95.6 9.2 108 355-478 61-173 (210)
301 2ipx_A RRNA 2'-O-methyltransfe 98.9 4.8E-09 1.6E-13 97.2 9.5 100 369-478 73-181 (233)
302 1dl5_A Protein-L-isoaspartate 98.9 5.4E-09 1.9E-13 101.5 10.3 110 356-478 60-174 (317)
303 2vdv_E TRNA (guanine-N(7)-)-me 98.9 1E-08 3.5E-13 95.7 11.8 123 370-493 46-190 (246)
304 1ixk_A Methyltransferase; open 98.9 6.3E-09 2.2E-13 100.8 10.5 100 369-477 114-244 (315)
305 3p9n_A Possible methyltransfer 98.9 2.6E-09 8.8E-14 95.5 7.2 119 354-478 24-152 (189)
306 2pbf_A Protein-L-isoaspartate 98.9 5.4E-09 1.8E-13 96.3 9.6 113 355-478 62-192 (227)
307 1l3i_A Precorrin-6Y methyltran 98.9 1.2E-08 4.2E-13 90.9 11.4 128 354-494 16-152 (192)
308 3uzu_A Ribosomal RNA small sub 98.9 6.8E-09 2.3E-13 98.2 9.8 106 114-230 25-137 (279)
309 2yvl_A TRMI protein, hypotheti 98.9 1.1E-08 3.7E-13 95.6 11.1 109 355-478 75-189 (248)
310 3duw_A OMT, O-methyltransferas 98.9 3.1E-09 1.1E-13 97.7 7.3 107 361-477 47-165 (223)
311 3kkz_A Uncharacterized protein 98.9 3.3E-09 1.1E-13 100.4 7.6 121 348-478 22-149 (267)
312 1xdz_A Methyltransferase GIDB; 98.9 3.4E-09 1.1E-13 98.7 7.4 115 370-494 67-194 (240)
313 3lec_A NADB-rossmann superfami 98.8 1.8E-09 6.1E-14 98.4 5.2 112 370-494 18-141 (230)
314 3tfw_A Putative O-methyltransf 98.8 3.4E-09 1.2E-13 99.2 7.3 108 361-478 52-169 (248)
315 1pjz_A Thiopurine S-methyltran 98.8 8.9E-09 3E-13 93.1 9.7 110 356-474 8-135 (203)
316 1fbn_A MJ fibrillarin homologu 98.8 2.6E-09 8.8E-14 98.8 6.2 98 369-477 70-176 (230)
317 1nv8_A HEMK protein; class I a 98.8 3.5E-09 1.2E-13 100.9 7.2 121 354-478 106-248 (284)
318 3grz_A L11 mtase, ribosomal pr 98.8 2.2E-09 7.6E-14 97.3 5.5 128 357-494 44-177 (205)
319 2nxc_A L11 mtase, ribosomal pr 98.8 3.1E-09 1.1E-13 99.8 6.6 113 371-494 118-236 (254)
320 3r3h_A O-methyltransferase, SA 98.8 6.2E-10 2.1E-14 103.7 1.8 100 369-477 56-168 (242)
321 1r18_A Protein-L-isoaspartate( 98.8 5.4E-09 1.8E-13 96.4 8.0 113 355-478 66-193 (227)
322 3evz_A Methyltransferase; NYSG 98.8 7.7E-09 2.6E-13 95.5 9.0 124 369-494 51-198 (230)
323 2ar0_A M.ecoki, type I restric 98.8 1E-08 3.5E-13 106.4 10.7 122 111-239 149-313 (541)
324 2ld4_A Anamorsin; methyltransf 98.8 1.4E-09 4.7E-14 96.1 3.6 81 131-237 10-100 (176)
325 1i1n_A Protein-L-isoaspartate 98.8 1.1E-08 3.8E-13 94.1 9.7 113 355-478 59-181 (226)
326 3lpm_A Putative methyltransfer 98.8 4.7E-09 1.6E-13 98.9 6.9 124 369-494 44-193 (259)
327 2ozv_A Hypothetical protein AT 98.8 1.1E-08 3.6E-13 96.4 9.3 109 369-478 32-169 (260)
328 1ws6_A Methyltransferase; stru 98.8 9.1E-09 3.1E-13 90.1 8.3 116 353-478 21-146 (171)
329 3gnl_A Uncharacterized protein 98.8 2.7E-09 9.3E-14 98.0 5.0 113 369-494 17-141 (244)
330 3c3y_A Pfomt, O-methyltransfer 98.8 6.1E-09 2.1E-13 96.7 7.4 99 370-477 67-179 (237)
331 2b3t_A Protein methyltransfera 98.8 2.3E-08 7.9E-13 95.1 11.5 88 353-444 92-183 (276)
332 3tr6_A O-methyltransferase; ce 98.8 4.2E-09 1.4E-13 96.9 6.1 100 369-477 60-172 (225)
333 4dzr_A Protein-(glutamine-N5) 98.8 2E-09 6.8E-14 98.1 3.9 88 355-445 13-109 (215)
334 2hnk_A SAM-dependent O-methylt 98.8 5E-09 1.7E-13 97.5 6.5 111 355-478 44-180 (239)
335 2bm8_A Cephalosporin hydroxyla 98.8 3.8E-09 1.3E-13 97.9 5.6 109 357-478 67-186 (236)
336 3hem_A Cyclopropane-fatty-acyl 98.8 9.2E-09 3.1E-13 99.2 8.5 112 361-478 62-182 (302)
337 2gb4_A Thiopurine S-methyltran 98.8 8.6E-09 2.9E-13 96.4 7.9 101 370-476 65-188 (252)
338 3tma_A Methyltransferase; thum 98.8 1.2E-08 4.1E-13 100.8 9.0 124 353-478 185-316 (354)
339 1zg3_A Isoflavanone 4'-O-methy 98.8 1.3E-08 4.3E-13 100.8 9.2 91 131-237 191-292 (358)
340 2gpy_A O-methyltransferase; st 98.8 7.2E-09 2.5E-13 95.9 6.8 111 356-478 39-159 (233)
341 1vbf_A 231AA long hypothetical 98.8 1.9E-08 6.5E-13 92.9 9.4 108 355-478 54-164 (231)
342 1qyr_A KSGA, high level kasuga 98.8 9E-09 3.1E-13 96.0 7.1 93 114-218 4-101 (252)
343 3m4x_A NOL1/NOP2/SUN family pr 98.8 1E-08 3.5E-13 103.4 7.7 100 369-477 101-232 (456)
344 3q87_B N6 adenine specific DNA 98.7 1.2E-08 4.2E-13 89.4 7.2 123 359-494 9-141 (170)
345 3o4f_A Spermidine synthase; am 98.7 8.7E-08 3E-12 90.2 13.2 107 132-239 82-199 (294)
346 3u81_A Catechol O-methyltransf 98.7 1.7E-08 5.7E-13 92.7 8.2 67 369-435 54-124 (221)
347 3orh_A Guanidinoacetate N-meth 98.7 1.3E-09 4.5E-14 101.1 0.8 105 369-478 56-169 (236)
348 3c3p_A Methyltransferase; NP_9 98.7 5.5E-09 1.9E-13 95.0 4.9 99 371-477 54-158 (210)
349 2frx_A Hypothetical protein YE 98.7 1.1E-08 3.6E-13 104.5 7.4 103 369-477 111-244 (479)
350 3ftd_A Dimethyladenosine trans 98.7 4.1E-08 1.4E-12 91.4 10.6 102 114-229 14-117 (249)
351 3m33_A Uncharacterized protein 98.7 1.1E-08 3.7E-13 94.3 6.6 105 355-478 33-141 (226)
352 3g5t_A Trans-aconitate 3-methy 98.7 1.9E-08 6.4E-13 96.9 8.6 102 370-477 33-147 (299)
353 3gru_A Dimethyladenosine trans 98.7 1.9E-08 6.6E-13 95.7 8.3 73 356-433 35-108 (295)
354 2avd_A Catechol-O-methyltransf 98.7 1E-08 3.4E-13 94.6 6.2 101 369-477 65-177 (229)
355 3dh0_A SAM dependent methyltra 98.7 1.6E-08 5.3E-13 92.6 7.4 111 361-478 27-142 (219)
356 1jg1_A PIMT;, protein-L-isoasp 98.7 2.7E-08 9.4E-13 92.1 9.1 109 355-478 75-188 (235)
357 3cbg_A O-methyltransferase; cy 98.7 7.8E-09 2.7E-13 95.6 5.1 100 370-477 69-180 (232)
358 3ujc_A Phosphoethanolamine N-m 98.7 9.8E-09 3.4E-13 96.9 5.8 116 355-478 39-158 (266)
359 2frn_A Hypothetical protein PH 98.7 2E-08 6.7E-13 95.6 7.8 113 371-494 123-249 (278)
360 3khk_A Type I restriction-modi 98.7 3.4E-08 1.2E-12 102.3 9.9 122 111-239 225-396 (544)
361 3p2e_A 16S rRNA methylase; met 98.7 3.3E-09 1.1E-13 97.6 2.0 107 370-477 21-137 (225)
362 3a27_A TYW2, uncharacterized p 98.7 2E-08 6.7E-13 95.2 7.4 99 369-478 115-218 (272)
363 3ll7_A Putative methyltransfer 98.7 3.4E-08 1.2E-12 97.8 9.2 102 131-240 91-211 (410)
364 3dlc_A Putative S-adenosyl-L-m 98.7 6.3E-08 2.1E-12 88.3 10.4 113 356-478 29-147 (219)
365 1dus_A MJ0882; hypothetical pr 98.7 4.1E-08 1.4E-12 87.6 9.0 112 358-478 39-156 (194)
366 1vl5_A Unknown conserved prote 98.7 1.3E-08 4.4E-13 95.9 5.8 110 359-478 25-139 (260)
367 3i9f_A Putative type 11 methyl 98.7 8.6E-09 2.9E-13 90.3 4.0 99 369-478 13-111 (170)
368 1xxl_A YCGJ protein; structura 98.7 3.6E-08 1.2E-12 91.6 8.5 113 356-478 6-123 (239)
369 2esr_A Methyltransferase; stru 98.7 9.7E-09 3.3E-13 90.6 4.3 114 355-478 14-137 (177)
370 3ggd_A SAM-dependent methyltra 98.7 2.2E-08 7.4E-13 93.4 6.9 101 370-478 53-162 (245)
371 1kpg_A CFA synthase;, cyclopro 98.7 4.4E-08 1.5E-12 93.7 9.2 102 369-478 60-167 (287)
372 4hg2_A Methyltransferase type 98.7 1.2E-08 4.1E-13 95.6 5.0 95 372-478 38-134 (257)
373 2fhp_A Methylase, putative; al 98.7 2.5E-08 8.5E-13 88.7 6.9 116 353-478 25-153 (187)
374 3fut_A Dimethyladenosine trans 98.7 2.7E-08 9.2E-13 93.6 7.3 72 356-433 32-103 (271)
375 3mq2_A 16S rRNA methyltransfer 98.7 6E-09 2.1E-13 95.4 2.7 98 369-477 23-138 (218)
376 3lkd_A Type I restriction-modi 98.7 2.4E-07 8E-12 95.8 14.9 126 111-239 197-359 (542)
377 3vc1_A Geranyl diphosphate 2-C 98.7 3.3E-08 1.1E-12 95.8 8.1 102 369-478 112-220 (312)
378 3iv6_A Putative Zn-dependent a 98.7 3.3E-08 1.1E-12 92.4 7.6 58 359-421 33-90 (261)
379 2yxl_A PH0851 protein, 450AA l 98.7 4.9E-08 1.7E-12 99.4 9.6 105 369-478 255-388 (450)
380 2igt_A SAM dependent methyltra 98.7 3.4E-08 1.2E-12 96.1 8.0 134 356-494 137-296 (332)
381 3bwc_A Spermidine synthase; SA 98.7 9.1E-08 3.1E-12 92.1 10.9 129 369-499 91-237 (304)
382 2r6z_A UPF0341 protein in RSP 98.7 5.6E-09 1.9E-13 97.8 2.3 82 131-219 81-173 (258)
383 2fk8_A Methoxy mycolic acid sy 98.7 8.5E-08 2.9E-12 93.1 10.6 109 360-478 79-193 (318)
384 4fsd_A Arsenic methyltransfera 98.7 2.2E-08 7.5E-13 99.9 6.4 103 371-478 81-202 (383)
385 3hnr_A Probable methyltransfer 98.6 3.1E-08 1.1E-12 90.6 6.9 106 362-478 36-144 (220)
386 3ofk_A Nodulation protein S; N 98.6 1.4E-08 4.9E-13 92.6 4.6 102 369-478 47-153 (216)
387 3g5l_A Putative S-adenosylmeth 98.6 6.1E-08 2.1E-12 90.8 9.0 103 369-478 40-144 (253)
388 3m6w_A RRNA methylase; rRNA me 98.6 2.9E-08 9.9E-13 100.3 7.1 99 369-477 97-227 (464)
389 2p35_A Trans-aconitate 2-methy 98.6 3.5E-08 1.2E-12 92.7 7.3 111 358-478 20-131 (259)
390 3ajd_A Putative methyltransfer 98.6 4.4E-08 1.5E-12 93.0 7.9 107 369-478 79-210 (274)
391 3ege_A Putative methyltransfer 98.6 5.5E-08 1.9E-12 91.6 8.5 110 355-478 18-129 (261)
392 1uwv_A 23S rRNA (uracil-5-)-me 98.6 6.1E-08 2.1E-12 98.2 9.3 72 358-434 273-347 (433)
393 2fpo_A Methylase YHHF; structu 98.6 2.6E-08 9E-13 89.9 5.7 114 354-478 36-159 (202)
394 3bkx_A SAM-dependent methyltra 98.6 5.9E-08 2E-12 92.1 8.4 67 361-429 33-109 (275)
395 3g07_A 7SK snRNA methylphospha 98.6 6.3E-08 2.2E-12 92.8 8.6 47 372-419 45-91 (292)
396 2o57_A Putative sarcosine dime 98.6 4.1E-08 1.4E-12 94.4 7.2 113 357-478 64-186 (297)
397 1o9g_A RRNA methyltransferase; 98.6 8.7E-08 3E-12 89.6 9.3 48 372-420 50-99 (250)
398 3jwg_A HEN1, methyltransferase 98.6 2.1E-08 7.3E-13 91.7 4.9 115 355-478 13-140 (219)
399 3k6r_A Putative transferase PH 98.6 5.5E-08 1.9E-12 91.6 7.6 114 370-494 122-249 (278)
400 3bus_A REBM, methyltransferase 98.6 4.3E-08 1.5E-12 92.9 6.8 112 358-478 48-165 (273)
401 3mgg_A Methyltransferase; NYSG 98.6 3.6E-08 1.2E-12 93.7 6.1 104 369-478 33-141 (276)
402 2ift_A Putative methylase HI07 98.6 2.9E-08 9.8E-13 89.6 5.1 110 356-478 37-162 (201)
403 3gu3_A Methyltransferase; alph 98.6 3.9E-08 1.3E-12 93.9 6.1 117 356-478 6-125 (284)
404 3tqs_A Ribosomal RNA small sub 98.6 4.8E-08 1.6E-12 91.2 6.5 73 356-433 14-87 (255)
405 3jwh_A HEN1; methyltransferase 98.6 1.4E-07 4.7E-12 86.2 9.5 114 356-478 14-140 (217)
406 1jsx_A Glucose-inhibited divis 98.6 2.8E-08 9.5E-13 90.1 4.7 96 373-478 65-164 (207)
407 3dtn_A Putative methyltransfer 98.6 5.9E-08 2E-12 89.7 7.0 113 358-478 30-147 (234)
408 3adn_A Spermidine synthase; am 98.6 5.2E-08 1.8E-12 93.1 6.7 107 370-478 80-197 (294)
409 3l8d_A Methyltransferase; stru 98.6 8.1E-08 2.8E-12 89.2 7.8 100 371-478 51-152 (242)
410 3s1s_A Restriction endonucleas 98.6 2.4E-07 8.1E-12 97.6 11.9 128 111-239 295-466 (878)
411 1zq9_A Probable dimethyladenos 98.6 9.9E-08 3.4E-12 90.9 8.3 84 356-444 13-100 (285)
412 3ccf_A Cyclopropane-fatty-acyl 98.6 6.8E-08 2.3E-12 91.9 7.2 105 362-478 48-153 (279)
413 3uzu_A Ribosomal RNA small sub 98.6 8.9E-08 3E-12 90.6 7.8 75 356-433 27-102 (279)
414 2h1r_A Dimethyladenosine trans 98.6 5.9E-08 2E-12 93.2 6.6 84 356-444 27-113 (299)
415 3bkw_A MLL3908 protein, S-aden 98.6 1.5E-07 5.2E-12 87.3 9.0 103 369-478 39-143 (243)
416 3opn_A Putative hemolysin; str 98.6 1.2E-07 4.1E-12 87.4 8.1 103 359-478 24-136 (232)
417 4htf_A S-adenosylmethionine-de 98.6 7.3E-08 2.5E-12 92.0 6.9 98 373-478 68-172 (285)
418 3ou2_A SAM-dependent methyltra 98.6 7.7E-08 2.6E-12 87.7 6.7 100 370-478 43-145 (218)
419 1qam_A ERMC' methyltransferase 98.5 1.9E-07 6.4E-12 86.9 9.2 73 356-433 15-88 (244)
420 3gjy_A Spermidine synthase; AP 98.5 6.9E-08 2.4E-12 92.3 6.1 102 375-478 91-199 (317)
421 1sqg_A SUN protein, FMU protei 98.5 1.5E-07 5E-12 95.3 8.9 104 369-478 242-373 (429)
422 1mjf_A Spermidine synthase; sp 98.5 1E-07 3.5E-12 90.7 7.2 105 371-478 73-192 (281)
423 2p7i_A Hypothetical protein; p 98.5 4.4E-08 1.5E-12 91.3 4.5 99 371-478 40-140 (250)
424 2b78_A Hypothetical protein SM 98.5 5.2E-08 1.8E-12 97.0 5.0 121 372-494 211-354 (385)
425 3dli_A Methyltransferase; PSI- 98.5 1.7E-07 5.7E-12 87.0 8.1 96 370-478 38-139 (240)
426 3ftd_A Dimethyladenosine trans 98.5 1.3E-07 4.3E-12 88.1 7.0 73 356-433 16-88 (249)
427 2yqz_A Hypothetical protein TT 98.5 1.1E-07 3.8E-12 89.4 6.7 102 369-478 35-140 (263)
428 1inl_A Spermidine synthase; be 98.5 1.1E-07 3.9E-12 91.0 6.7 106 372-478 89-204 (296)
429 4dmg_A Putative uncharacterize 98.5 3.3E-07 1.1E-11 91.1 10.0 112 371-494 212-349 (393)
430 2jjq_A Uncharacterized RNA met 98.5 2.9E-07 9.9E-12 92.6 9.6 111 356-478 274-386 (425)
431 2b9e_A NOL1/NOP2/SUN domain fa 98.5 2.1E-07 7.3E-12 89.4 8.2 89 369-461 98-190 (309)
432 2h00_A Methyltransferase 10 do 98.5 5.5E-08 1.9E-12 91.2 4.0 72 373-445 65-148 (254)
433 3hp7_A Hemolysin, putative; st 98.5 1.9E-07 6.3E-12 88.3 7.5 104 360-478 73-184 (291)
434 2o07_A Spermidine synthase; st 98.5 1.6E-07 5.3E-12 90.3 7.0 108 369-478 91-208 (304)
435 1xj5_A Spermidine synthase 1; 98.5 1.6E-07 5.6E-12 91.2 7.2 103 369-477 116-233 (334)
436 3tm4_A TRNA (guanine N2-)-meth 98.5 2.2E-07 7.4E-12 92.2 8.1 120 353-478 200-328 (373)
437 1iy9_A Spermidine synthase; ro 98.5 1.3E-07 4.6E-12 89.5 6.3 119 372-492 74-209 (275)
438 1zx0_A Guanidinoacetate N-meth 98.5 9.3E-08 3.2E-12 88.6 4.9 103 370-478 57-169 (236)
439 3e8s_A Putative SAM dependent 98.5 1.9E-07 6.4E-12 85.6 6.8 98 369-478 48-151 (227)
440 1qyr_A KSGA, high level kasuga 98.5 2.3E-07 7.9E-12 86.4 7.2 73 356-433 6-79 (252)
441 2qm3_A Predicted methyltransfe 98.5 3.9E-07 1.3E-11 90.4 9.3 110 358-475 157-273 (373)
442 2pt6_A Spermidine synthase; tr 98.4 2.1E-07 7.2E-12 90.1 7.0 115 371-491 114-249 (321)
443 3pfg_A N-methyltransferase; N, 98.4 6.4E-08 2.2E-12 91.2 3.2 103 370-478 47-150 (263)
444 2wk1_A NOVP; transferase, O-me 98.4 5.2E-07 1.8E-11 84.9 9.3 102 132-236 105-242 (282)
445 3g2m_A PCZA361.24; SAM-depende 98.4 1.7E-07 5.8E-12 90.2 6.1 112 356-478 68-189 (299)
446 1ne2_A Hypothetical protein TA 98.4 3.4E-07 1.2E-11 82.4 7.7 87 355-446 32-119 (200)
447 2b2c_A Spermidine synthase; be 98.4 1.9E-07 6.5E-12 90.0 6.4 106 371-478 106-221 (314)
448 3ocj_A Putative exported prote 98.4 7.5E-08 2.6E-12 92.9 3.5 105 369-478 114-226 (305)
449 2i7c_A Spermidine synthase; tr 98.4 5.7E-07 1.9E-11 85.6 9.6 104 369-478 74-191 (283)
450 3tka_A Ribosomal RNA small sub 98.4 4.9E-07 1.7E-11 85.8 8.9 90 117-217 43-138 (347)
451 2xvm_A Tellurite resistance pr 98.4 1.5E-07 5.2E-12 84.4 5.2 104 369-478 28-135 (199)
452 2cmg_A Spermidine synthase; tr 98.4 1.3E-07 4.6E-12 88.7 4.9 95 370-478 69-170 (262)
453 1wy7_A Hypothetical protein PH 98.4 4.3E-07 1.5E-11 82.1 8.2 131 355-494 30-167 (207)
454 3lcc_A Putative methyl chlorid 98.4 4.7E-07 1.6E-11 83.6 8.6 108 362-478 58-170 (235)
455 2pjd_A Ribosomal RNA small sub 98.4 3.3E-08 1.1E-12 97.1 0.7 116 359-478 184-302 (343)
456 2kw5_A SLR1183 protein; struct 98.4 2.4E-07 8.2E-12 83.4 6.1 98 371-478 28-130 (202)
457 3h2b_A SAM-dependent methyltra 98.4 7.7E-07 2.6E-11 80.1 9.3 96 374-478 42-140 (203)
458 1xtp_A LMAJ004091AAA; SGPP, st 98.4 2.5E-07 8.5E-12 86.5 6.1 109 362-478 84-196 (254)
459 3m70_A Tellurite resistance pr 98.4 1.5E-07 5.1E-12 89.9 4.5 101 372-478 119-222 (286)
460 3e23_A Uncharacterized protein 98.4 2.2E-07 7.5E-12 84.3 5.5 98 370-478 40-140 (211)
461 1m6y_A S-adenosyl-methyltransf 98.4 2.2E-07 7.4E-12 88.8 5.6 72 358-432 13-86 (301)
462 1ve3_A Hypothetical protein PH 98.4 3.3E-07 1.1E-11 84.0 6.6 103 370-478 35-141 (227)
463 3c0k_A UPF0064 protein YCCW; P 98.4 2.8E-07 9.5E-12 92.3 6.5 121 372-494 219-362 (396)
464 4hc4_A Protein arginine N-meth 98.4 1.2E-07 4.2E-12 93.1 3.7 97 372-476 82-186 (376)
465 2qy6_A UPF0209 protein YFCK; s 98.4 3.9E-07 1.3E-11 85.0 7.0 105 132-236 59-211 (257)
466 2oyr_A UPF0341 protein YHIQ; a 98.4 7.1E-07 2.4E-11 83.1 8.7 105 123-232 78-194 (258)
467 4gqb_A Protein arginine N-meth 98.4 7.2E-07 2.5E-11 92.9 9.4 96 134-235 358-464 (637)
468 1wzn_A SAM-dependent methyltra 98.4 3.1E-07 1.1E-11 85.8 6.1 105 369-478 37-144 (252)
469 1uir_A Polyamine aminopropyltr 98.4 3.5E-07 1.2E-11 88.4 6.3 103 371-478 75-194 (314)
470 3bt7_A TRNA (uracil-5-)-methyl 98.4 8E-07 2.7E-11 88.0 9.1 70 359-434 202-274 (369)
471 2pxx_A Uncharacterized protein 98.4 1.2E-06 4.1E-11 79.5 9.3 113 357-478 29-158 (215)
472 3sm3_A SAM-dependent methyltra 98.4 1.3E-06 4.4E-11 80.5 9.5 100 371-478 28-140 (235)
473 3thr_A Glycine N-methyltransfe 98.3 5.7E-07 2E-11 86.1 7.3 116 358-478 44-174 (293)
474 1p91_A Ribosomal RNA large sub 98.3 8.7E-07 3E-11 83.6 8.4 92 372-478 84-177 (269)
475 2plw_A Ribosomal RNA methyltra 98.3 2.9E-07 9.9E-12 82.8 4.6 54 371-432 20-74 (201)
476 3bzb_A Uncharacterized protein 98.3 3.9E-07 1.3E-11 86.7 5.6 59 356-418 64-123 (281)
477 1wxx_A TT1595, hypothetical pr 98.3 2.3E-07 8E-12 92.3 4.1 119 373-494 209-348 (382)
478 2fyt_A Protein arginine N-meth 98.3 2.2E-07 7.6E-12 90.9 3.8 100 369-476 60-168 (340)
479 3r0q_C Probable protein argini 98.3 3.6E-07 1.2E-11 90.7 5.3 104 369-477 59-167 (376)
480 2ex4_A Adrenal gland protein A 98.3 2.2E-07 7.6E-12 86.3 3.6 99 373-478 79-184 (241)
481 2k4m_A TR8_protein, UPF0146 pr 98.3 1.6E-06 5.4E-11 71.5 7.9 96 119-236 21-119 (153)
482 3cvo_A Methyltransferase-like 98.3 1.2E-06 4.3E-11 77.8 7.9 73 354-433 14-92 (202)
483 3bxo_A N,N-dimethyltransferase 98.3 6E-07 2E-11 83.0 6.1 101 372-478 39-140 (239)
484 1qzz_A RDMB, aclacinomycin-10- 98.3 1.1E-06 3.7E-11 87.4 8.3 108 362-478 173-286 (374)
485 3gdh_A Trimethylguanosine synt 98.3 3.5E-07 1.2E-11 84.9 4.4 71 371-444 76-151 (241)
486 2yx1_A Hypothetical protein MJ 98.3 3.3E-07 1.1E-11 89.5 4.4 94 371-478 193-290 (336)
487 3q7e_A Protein arginine N-meth 98.3 5E-07 1.7E-11 88.7 5.7 102 370-476 63-170 (349)
488 3htx_A HEN1; HEN1, small RNA m 98.3 3.5E-07 1.2E-11 96.5 4.3 73 358-432 708-789 (950)
489 3gwz_A MMCR; methyltransferase 98.3 8.5E-07 2.9E-11 87.9 7.0 108 361-478 192-306 (369)
490 2gs9_A Hypothetical protein TT 98.3 8.8E-07 3E-11 80.3 6.5 94 372-478 35-131 (211)
491 1ej0_A FTSJ; methyltransferase 98.3 4.7E-07 1.6E-11 79.3 4.5 54 371-432 20-73 (180)
492 2nyu_A Putative ribosomal RNA 98.3 5.2E-07 1.8E-11 80.8 4.7 53 370-430 19-80 (196)
493 3dou_A Ribosomal RNA large sub 98.3 7.1E-07 2.4E-11 79.6 5.3 51 371-432 23-73 (191)
494 2aot_A HMT, histamine N-methyl 98.3 3.3E-07 1.1E-11 87.7 3.4 102 372-478 51-171 (292)
495 3bgv_A MRNA CAP guanine-N7 met 98.2 3.7E-07 1.3E-11 88.4 3.2 102 370-478 31-154 (313)
496 2y1w_A Histone-arginine methyl 98.2 7E-07 2.4E-11 87.7 5.2 100 369-476 46-152 (348)
497 2g72_A Phenylethanolamine N-me 98.2 1.6E-07 5.5E-12 89.8 0.4 46 372-419 70-115 (289)
498 1g6q_1 HnRNP arginine N-methyl 98.2 7.1E-07 2.4E-11 86.9 5.0 102 370-476 35-142 (328)
499 3evf_A RNA-directed RNA polyme 98.2 7.1E-07 2.4E-11 82.2 4.6 103 130-240 71-186 (277)
500 3ll7_A Putative methyltransfer 98.2 6.8E-07 2.3E-11 88.5 4.8 88 371-461 91-191 (410)
No 1
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.95 E-value=2.5e-27 Score=220.69 Aligned_cols=218 Identities=36% Similarity=0.641 Sum_probs=190.2
Q ss_pred CCCcccCCCccHHHHHHHHHHcCCCCCHHHHHHHHhCCCCCccCCCCCCCcccccCCCcccchhHHHHHHHHHHhhcCCC
Q psy7829 54 NLNHFKNEGTCQTDLVNHLRDIGKIRTERVAQAFYKVDRGNFANEEPYQDVSASLGYAGVMNAPNQIADAAENLKLHLVD 133 (511)
Q Consensus 54 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~a~~~~~r~~~~~~~~y~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~ 133 (511)
..|.|++++.++..++++|...+++.++.+.++|..++|+.|.+..+|.+.+++++++.++++|.+.+.+++.+...+++
T Consensus 5 ~~m~~~~~~~~~~~l~~~l~~~~~~~~~~~~~a~~~~~r~~f~~~~~y~d~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~ 84 (227)
T 1r18_A 5 IHMAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTISAPHMHAFALEYLRDHLKP 84 (227)
T ss_dssp CCCCCCCBCSSHHHHHHHHHHTTSCCCHHHHHHHHTSCGGGTCSSCTTBSSCEEEETTEEECCHHHHHHHHHHTTTTCCT
T ss_pred ceeeeecCccHHHHHHHHHHhcCCCCCHHHHHHHHhCCHHHcCCcccccCCCcccCCCCccCChHHHHHHHHHHHhhCCC
Confidence 46788999999999999999999878999999999999999999999999999999999999999999999988655788
Q ss_pred CCEEEEEcCCccHHHHHHHHHhCC-----CceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCc
Q psy7829 134 GAKVLDLGSGSGYQTCVFAHMVGP-----TGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPY 208 (511)
Q Consensus 134 ~~~vLDiG~G~G~~~~~la~~~~~-----~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 208 (511)
+.+|||+|||+|+++..+++..+. .++|+++|+++.+++.|++++...+...+..++++++.+|+.+.+...++|
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 164 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPY 164 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGGCSE
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcCCCc
Confidence 999999999999999999997642 368999999999999999998763200000357999999998755444789
Q ss_pred cEEEecCCCCchHHHHHhhcccCcEEEEEEccCCCcceEEEEEEecCCeEEEEeecceEEEec
Q psy7829 209 DVIYYGGCVSEVPSRVLNQLKKGGRILAPIGPMDDFQKLTQIDRFHDNTLQKTDLFEVAYDAI 271 (511)
Q Consensus 209 D~I~~~~~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 271 (511)
|+|+++.+++++++++.++|||||++++++++....+.+..+.+..++.+..+.++.+.|+|+
T Consensus 165 D~I~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~p~ 227 (227)
T 1r18_A 165 NAIHVGAAAPDTPTELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPL 227 (227)
T ss_dssp EEEEECSCBSSCCHHHHHTEEEEEEEEEEESCSSSCEEEEEEEECTTSCEEEEEEEEECCCCC
T ss_pred cEEEECCchHHHHHHHHHHhcCCCEEEEEEecCCCceEEEEEEEcCCCcEEEEEeccEEEeeC
Confidence 999999999999999999999999999999987777888888887788899999999999886
No 2
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.94 E-value=3.7e-26 Score=212.83 Aligned_cols=216 Identities=27% Similarity=0.461 Sum_probs=181.9
Q ss_pred CcccCCCccHHHHHHHHHHcCCCCCHHHHHHHHhCCCCCccCCCCCCCcccccCCCcccchhHHHHHHHHHHhhcCCCCC
Q psy7829 56 NHFKNEGTCQTDLVNHLRDIGKIRTERVAQAFYKVDRGNFANEEPYQDVSASLGYAGVMNAPNQIADAAENLKLHLVDGA 135 (511)
Q Consensus 56 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~a~~~~~r~~~~~~~~y~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~ 135 (511)
+.|++++.++..++++|+..+.+.++.+.++|+.++|+.|.|..+|.+.++.++.+..+++|.+.+.+++.+...++++.
T Consensus 3 ~~w~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~r~~f~p~~~y~d~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~ 82 (227)
T 2pbf_A 3 NMYKLSENNHKSLLENLKRRGIIDDDDVYNTMLQVDRGKYIKEIPYIDTPVYISHGVTISAPHMHALSLKRLINVLKPGS 82 (227)
T ss_dssp ------CCCHHHHHHHHHHTTSCCCHHHHHHHHTSCGGGTCSSSTTSSSCEEEETTEEECCHHHHHHHHHHHTTTSCTTC
T ss_pred cccccCchhHHHHHHHHHhcCCcCCHHHHHHHHhCCHHHcCCcccCCCCccccCCCCccCChHHHHHHHHHHHhhCCCCC
Confidence 56888899999999999999877899999999999999999999999999999999999999999999998854578899
Q ss_pred EEEEEcCCccHHHHHHHHHhC----CCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC----CCCCC
Q psy7829 136 KVLDLGSGSGYQTCVFAHMVG----PTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY----LPEAP 207 (511)
Q Consensus 136 ~vLDiG~G~G~~~~~la~~~~----~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~ 207 (511)
+|||+|||+|+++..+++..+ +.++|+++|+++.+++.|++++...+...+..++++++.+|+.+.+ ...++
T Consensus 83 ~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 162 (227)
T 2pbf_A 83 RAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELGL 162 (227)
T ss_dssp EEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHCC
T ss_pred EEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCCC
Confidence 999999999999999999876 5679999999999999999998875310001468999999998754 34478
Q ss_pred ccEEEecCCCCchHHHHHhhcccCcEEEEEEccCCCcceEEEEEEecCCeEEEEeecceEEEeccc
Q psy7829 208 YDVIYYGGCVSEVPSRVLNQLKKGGRILAPIGPMDDFQKLTQIDRFHDNTLQKTDLFEVAYDAIMR 273 (511)
Q Consensus 208 fD~I~~~~~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 273 (511)
||+|+++.+++++++.+.++|||||++++++.+. ..+.+..+.+ .++.+....++.+.|+|+.+
T Consensus 163 fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~pl~~ 226 (227)
T 2pbf_A 163 FDAIHVGASASELPEILVDLLAENGKLIIPIEED-YTQVLYEITK-KNGKIIKDRLFDVCFVSLKK 226 (227)
T ss_dssp EEEEEECSBBSSCCHHHHHHEEEEEEEEEEEEET-TEEEEEEEEC-SCC-CEEEEEEEECCCBCCC
T ss_pred cCEEEECCchHHHHHHHHHhcCCCcEEEEEEccC-CceEEEEEEE-eCCeEEEEEeccEEEEeccC
Confidence 9999999999999999999999999999998863 4466677777 67788889999999999864
No 3
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.94 E-value=1.4e-25 Score=208.75 Aligned_cols=221 Identities=42% Similarity=0.703 Sum_probs=190.3
Q ss_pred ccCCCccHHHHHHHHHHcCCCCCHHHHHHHHhCCCCCccCCCCCCCcccccCCCcccchhHHHHHHHHHHhhcCCCCCEE
Q psy7829 58 FKNEGTCQTDLVNHLRDIGKIRTERVAQAFYKVDRGNFANEEPYQDVSASLGYAGVMNAPNQIADAAENLKLHLVDGAKV 137 (511)
Q Consensus 58 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~a~~~~~r~~~~~~~~y~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~v 137 (511)
|++++.++.+++++|+..|++.++.+.++|..++|+.|.+...|.+.+..++++..+++|.+.+.+++.+..++.++.+|
T Consensus 2 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~a~~~~~r~~f~~~~~y~~~~~~~~~~~~~~~p~~~~~~l~~l~~~~~~~~~v 81 (226)
T 1i1n_A 2 WKSGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKA 81 (226)
T ss_dssp CCCCCSSHHHHHHHHHHTTSCCSHHHHHHHHTSCGGGTCSSCTTSSSCEEEETTEEECCHHHHHHHHHHTTTTSCTTCEE
T ss_pred cCcCCchHHHHHHHHHHcCCcCCHHHHHHHHhCCHHHcCCCccCCCCccccCCCceecCHHHHHHHHHHHHhhCCCCCEE
Confidence 56778889999999999998789999999999999999998899999999988999999999999998886557789999
Q ss_pred EEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEEEecCCC
Q psy7829 138 LDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVIYYGGCV 217 (511)
Q Consensus 138 LDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~ 217 (511)
||+|||+|..+..+++..++.++|+++|+++.+++.+++++...+...+..++++++++|+...+...++||+|+++.++
T Consensus 82 LDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~ 161 (226)
T 1i1n_A 82 LDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAA 161 (226)
T ss_dssp EEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEECSBB
T ss_pred EEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEEECCch
Confidence 99999999999999998766779999999999999999998774310001458999999987655445789999999999
Q ss_pred CchHHHHHhhcccCcEEEEEEccCCCcceEEEEEEecCCeEEEEeecceEEEecccccccc
Q psy7829 218 SEVPSRVLNQLKKGGRILAPIGPMDDFQKLTQIDRFHDNTLQKTDLFEVAYDAIMRKALQM 278 (511)
Q Consensus 218 ~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 278 (511)
+++++++.+.|||||++++++.+....+.+..+.+..++.+....++.+.|+|+......|
T Consensus 162 ~~~~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~p~~~~~~~~ 222 (226)
T 1i1n_A 162 PVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSIKMKPLMGVIYVPLTDKEKQW 222 (226)
T ss_dssp SSCCHHHHHTEEEEEEEEEEESCTTSCEEEEEEEECTTSCEEEEEEEEECCCBCCCHHHHC
T ss_pred HHHHHHHHHhcCCCcEEEEEEecCCCceEEEEEEEcCCCcEEEEEcCceEEEeccCCcccc
Confidence 9999999999999999999998776677777888877788988999999999998754334
No 4
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.91 E-value=5.4e-23 Score=188.92 Aligned_cols=197 Identities=27% Similarity=0.493 Sum_probs=172.2
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHhCCCCCccCC----CCCCCcccccCCCcccchhHHHHHHHHHHhhcCCCCCEEEEE
Q psy7829 65 QTDLVNHLRDIGKIRTERVAQAFYKVDRGNFANE----EPYQDVSASLGYAGVMNAPNQIADAAENLKLHLVDGAKVLDL 140 (511)
Q Consensus 65 ~~~l~~~l~~~~~~~~~~~~~a~~~~~r~~~~~~----~~y~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~vLDi 140 (511)
..++.++|+..|+ .++.+.++|..++|+.|.+. ..|.+.+++++.+..+++|.+.+.+++.+. ..++.+|||+
T Consensus 8 ~~~~~~~l~~~gv-~~~~~~~~~~~~~r~~f~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~vLdi 84 (210)
T 3lbf_A 8 VQALLDQLRAQGI-QDEQVLNALAAVPREKFVDEAFEQKAWDNIALPIGQGQTISQPYMVARMTELLE--LTPQSRVLEI 84 (210)
T ss_dssp HHHHHHHHHHTTC-CCHHHHHHHHHSCGGGGSCGGGGGGTTSSSCEECTTSCEECCHHHHHHHHHHTT--CCTTCEEEEE
T ss_pred HHHHHHHHHHcCC-CCHHHHHHHHhCCHHHcCCcchhhhccCCCccccCCCCEeCCHHHHHHHHHhcC--CCCCCEEEEE
Confidence 4678999999995 79999999999999999876 378888888888999999999999999886 7889999999
Q ss_pred cCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEEEecCCCCch
Q psy7829 141 GSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVIYYGGCVSEV 220 (511)
Q Consensus 141 G~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~~ 220 (511)
|||+|.++..+++. ..+|+++|+++.+++.|++++...+ .++++++.+|+.+.+...++||+|+++.+++++
T Consensus 85 G~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~ 156 (210)
T 3lbf_A 85 GTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLD-----LHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEI 156 (210)
T ss_dssp CCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEESCGGGCCGGGCCEEEEEESSBCSSC
T ss_pred cCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcC-----CCceEEEECCcccCCccCCCccEEEEccchhhh
Confidence 99999999999998 3579999999999999999998853 458999999998766556789999999999999
Q ss_pred HHHHHhhcccCcEEEEEEccCCCcceEEEEEEecCCeEEEEeecceEEEeccccc
Q psy7829 221 PSRVLNQLKKGGRILAPIGPMDDFQKLTQIDRFHDNTLQKTDLFEVAYDAIMRKA 275 (511)
Q Consensus 221 ~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 275 (511)
++.+.+.|||||+++++++. ..+.+..+.+. .+.+....+..+.|+|+.+..
T Consensus 157 ~~~~~~~L~pgG~lv~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~f~pl~~~~ 208 (210)
T 3lbf_A 157 PTALMTQLDEGGILVLPVGE--EHQYLKRVRRR-GGEFIIDTVEAVRFVPLVKGE 208 (210)
T ss_dssp CTHHHHTEEEEEEEEEEECS--SSCEEEEEEEE-TTEEEEEEEEECCCCBCCCSS
T ss_pred hHHHHHhcccCcEEEEEEcC--CceEEEEEEEc-CCeEEEEEeccEEEEEccCcc
Confidence 99999999999999999887 45666677664 677888889999999998643
No 5
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.90 E-value=1.8e-22 Score=188.88 Aligned_cols=207 Identities=26% Similarity=0.444 Sum_probs=177.0
Q ss_pred CccHHHHHHHHHHcCCCCCHHHHHHHHhCCCCCccCCC----CCCCcccccCCCcccchhHHHHHHHHHHhhcCCCCCEE
Q psy7829 62 GTCQTDLVNHLRDIGKIRTERVAQAFYKVDRGNFANEE----PYQDVSASLGYAGVMNAPNQIADAAENLKLHLVDGAKV 137 (511)
Q Consensus 62 ~~~~~~l~~~l~~~~~~~~~~~~~a~~~~~r~~~~~~~----~y~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~v 137 (511)
...+..++++|+..+.+.++.+.++|..++|+.|.+.. .|.+.+.++..+..+++|.+...+++.+. +.++.+|
T Consensus 18 ~~~~~~l~~~l~~~~~~~~~~~~~a~~~v~r~~f~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~v 95 (235)
T 1jg1_A 18 YEKWMRTVEMLKAEGIIRSKEVERAFLKYPRYLSVEDKYKKYAHIDEPLPIPAGQTVSAPHMVAIMLEIAN--LKPGMNI 95 (235)
T ss_dssp HHHHHHHHHHHHHTTSCCSHHHHHHHHHSCGGGGSCGGGGGGTTSSSCEECSTTCEECCHHHHHHHHHHHT--CCTTCCE
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHhCCHhhhCCchhhhcCccCCCcccCCCceeccHHHHHHHHHhcC--CCCCCEE
Confidence 35678899999966666889999999999999998764 68888888888999999999999999886 7889999
Q ss_pred EEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEEEecCCC
Q psy7829 138 LDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVIYYGGCV 217 (511)
Q Consensus 138 LDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~ 217 (511)
||+|||+|.++..+++..+ .+|+++|+++.+++.|++++...+ .++++++.+|+...+....+||+|+++.++
T Consensus 96 LdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~Ii~~~~~ 168 (235)
T 1jg1_A 96 LEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAG-----VKNVHVILGDGSKGFPPKAPYDVIIVTAGA 168 (235)
T ss_dssp EEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEESCGGGCCGGGCCEEEEEECSBB
T ss_pred EEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcC-----CCCcEEEECCcccCCCCCCCccEEEECCcH
Confidence 9999999999999999873 689999999999999999998753 457999999985544444569999999999
Q ss_pred CchHHHHHhhcccCcEEEEEEccCCCcceEEEEEEecCCeEEEEeecceEEEecccccccc
Q psy7829 218 SEVPSRVLNQLKKGGRILAPIGPMDDFQKLTQIDRFHDNTLQKTDLFEVAYDAIMRKALQM 278 (511)
Q Consensus 218 ~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 278 (511)
+++++++.+.|||||+++++++.....+.+..+.+ .++.+....++.+.|+|+......+
T Consensus 169 ~~~~~~~~~~L~pgG~lvi~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~f~p~~~~~~~~ 228 (235)
T 1jg1_A 169 PKIPEPLIEQLKIGGKLIIPVGSYHLWQELLEVRK-TKDGIKIKNHGGVAFVPLIGEYGWK 228 (235)
T ss_dssp SSCCHHHHHTEEEEEEEEEEECSSSSCEEEEEEEE-ETTEEEEEEEEEECCCBCBSTTSBC
T ss_pred HHHHHHHHHhcCCCcEEEEEEecCCCccEEEEEEE-eCCeEEEEEeccEEEEEccCCCcch
Confidence 99999999999999999999987655467777777 4678888999999999998765443
No 6
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.89 E-value=4.3e-22 Score=183.58 Aligned_cols=201 Identities=33% Similarity=0.554 Sum_probs=171.9
Q ss_pred cHHHHHHHH-HHcCCCCCHHHHHHHHhCCCCCccCC----CCCCCcccccCCCcccchhHHHHHHHHHHhhcCCCCCEEE
Q psy7829 64 CQTDLVNHL-RDIGKIRTERVAQAFYKVDRGNFANE----EPYQDVSASLGYAGVMNAPNQIADAAENLKLHLVDGAKVL 138 (511)
Q Consensus 64 ~~~~l~~~l-~~~~~~~~~~~~~a~~~~~r~~~~~~----~~y~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~vL 138 (511)
.+..++++| +..+ +.++.+.++++.++|..|.+. ..|.+.+.+.+.+..+++|.+...+++.+. +.++.+||
T Consensus 6 ~~~~~~~~l~~~~~-~~~~~v~~a~~~~~r~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vL 82 (215)
T 2yxe_A 6 QKKAVIEKLIREGY-IKSKRVIDALLKVPREEFLPEHLKEYAYVDTPLEIGYGQTISAIHMVGMMCELLD--LKPGMKVL 82 (215)
T ss_dssp HHHHHHHHHHHHTS-CCCHHHHHHHHHSCGGGGSCGGGGGGTTSCSCEEEETTEEECCHHHHHHHHHHTT--CCTTCEEE
T ss_pred HHHHHHHHhHHhcC-CCCHHHHHHHHhCCHHHcCCchhhhhcccCCCccCCCCcEeCcHHHHHHHHHhhC--CCCCCEEE
Confidence 356788999 8888 579999999999999988875 378888888888888999999999888885 77899999
Q ss_pred EEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEEEecCCCC
Q psy7829 139 DLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVIYYGGCVS 218 (511)
Q Consensus 139 DiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~ 218 (511)
|+|||+|.++..+++..++..+|+++|+++.+++.+++++...+ .++++++.+|+...+...++||+|+++.+++
T Consensus 83 diG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~ 157 (215)
T 2yxe_A 83 EIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG-----YDNVIVIVGDGTLGYEPLAPYDRIYTTAAGP 157 (215)
T ss_dssp EECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT-----CTTEEEEESCGGGCCGGGCCEEEEEESSBBS
T ss_pred EECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-----CCCeEEEECCcccCCCCCCCeeEEEECCchH
Confidence 99999999999999998666899999999999999999988753 4579999999866554357899999999999
Q ss_pred chHHHHHhhcccCcEEEEEEccCCCcceEEEEEEecCCeEEEEeecceEEEeccccc
Q psy7829 219 EVPSRVLNQLKKGGRILAPIGPMDDFQKLTQIDRFHDNTLQKTDLFEVAYDAIMRKA 275 (511)
Q Consensus 219 ~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 275 (511)
++++++.+.|||||++++.+.... +.+..+.+. .+.+....++.+.|.|+.+..
T Consensus 158 ~~~~~~~~~L~pgG~lv~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~ 211 (215)
T 2yxe_A 158 KIPEPLIRQLKDGGKLLMPVGRYL--QRLVLAEKR-GDEIIIKDCGPVAFVPLVGKE 211 (215)
T ss_dssp SCCHHHHHTEEEEEEEEEEESSSS--EEEEEEEEE-TTEEEEEEEEEECCCBCBSTT
T ss_pred HHHHHHHHHcCCCcEEEEEECCCC--cEEEEEEEe-CCEEEEEEeccEEEEeccccc
Confidence 999999999999999999987663 777777776 457888888888999987553
No 7
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.85 E-value=2.1e-20 Score=182.62 Aligned_cols=200 Identities=29% Similarity=0.408 Sum_probs=165.2
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHhCCCCCccCCC-----CCCCccc-ccCCC---cccchhHHHHHHHHHHhhcCCCCC
Q psy7829 65 QTDLVNHLRDIGKIRTERVAQAFYKVDRGNFANEE-----PYQDVSA-SLGYA---GVMNAPNQIADAAENLKLHLVDGA 135 (511)
Q Consensus 65 ~~~l~~~l~~~~~~~~~~~~~a~~~~~r~~~~~~~-----~y~~~~~-~~~~~---~~~~~p~~~~~~~~~l~~~~~~~~ 135 (511)
+.++.++|+..|+ .+ .+.++|+.+||+.|.++. .|.+.+. ++..+ +.+++|.+...+++.+. ++++.
T Consensus 2 ~~~~~~~l~~~gi-~~-~v~~a~~~vpr~~fl~~~~~y~~~y~~~~~~~l~~~~f~q~~~~~~~~~~l~~~l~--~~~~~ 77 (317)
T 1dl5_A 2 REKLFWILKKYGV-SD-HIAKAFLEIPREEFLTKSYPLSYVYEDIVLVSYDDGEEYSTSSQPSLMALFMEWVG--LDKGM 77 (317)
T ss_dssp HHHHHHHHHHTTC-CH-HHHHHHHHSCGGGGCSSCCCHHHHTSSSCEEEEECSSCEEEECCHHHHHHHHHHTT--CCTTC
T ss_pred hHHHHHHHHHcCC-hH-HHHHHHHhCCHHHhCCchhccccCccCCCcccccCCCcceeccCHHHHHHHHHhcC--CCCcC
Confidence 3578899999995 56 999999999999888753 5677777 77777 78888889998888886 78899
Q ss_pred EEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEEEecC
Q psy7829 136 KVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVIYYGG 215 (511)
Q Consensus 136 ~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~~ 215 (511)
+|||+|||+|.++..+++..+..++|+++|+++.+++.|++++...+ .++++++.+|+.+.++..++||+|+++.
T Consensus 78 ~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g-----~~~v~~~~~d~~~~~~~~~~fD~Iv~~~ 152 (317)
T 1dl5_A 78 RVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-----IENVIFVCGDGYYGVPEFSPYDVIFVTV 152 (317)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEESCGGGCCGGGCCEEEEEECS
T ss_pred EEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCeEEEECChhhccccCCCeEEEEEcC
Confidence 99999999999999999987445789999999999999999998754 4579999999987554457899999999
Q ss_pred CCCchHHHHHhhcccCcEEEEEEccCC-CcceEEEEEEecCCeEEEEeecceEEEecccc
Q psy7829 216 CVSEVPSRVLNQLKKGGRILAPIGPMD-DFQKLTQIDRFHDNTLQKTDLFEVAYDAIMRK 274 (511)
Q Consensus 216 ~~~~~~~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 274 (511)
+++++.+.+.+.|||||++++.+.+.. ..+.+..+.+. .+.+....++++.|.|+...
T Consensus 153 ~~~~~~~~~~~~LkpgG~lvi~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~p~~~~ 211 (317)
T 1dl5_A 153 GVDEVPETWFTQLKEGGRVIVPINLKLSRRQPAFLFKKK-DPYLVGNYKLETRFITAGGN 211 (317)
T ss_dssp BBSCCCHHHHHHEEEEEEEEEEBCBGGGTBCEEEEEEEE-TTEEEEEEEEECCCCBCCGG
T ss_pred CHHHHHHHHHHhcCCCcEEEEEECCCCcccceEEEEEEe-CCcEEEEEeccEEEEEccCc
Confidence 999999999999999999999876553 13555556554 34677788888778877654
No 8
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.81 E-value=2.6e-19 Score=166.77 Aligned_cols=179 Identities=30% Similarity=0.407 Sum_probs=146.3
Q ss_pred CHHHHHHHHhCCCCCccCCC----CCC--CcccccCCCcccchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHH
Q psy7829 80 TERVAQAFYKVDRGNFANEE----PYQ--DVSASLGYAGVMNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAH 153 (511)
Q Consensus 80 ~~~~~~a~~~~~r~~~~~~~----~y~--~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~ 153 (511)
++.+.++|..+||..|.+.. .|. +...+.+.+..+++|.+...+++.+. ..++.+|||+|||+|.++..+++
T Consensus 13 ~~~v~~a~~~v~r~~f~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~ 90 (231)
T 1vbf_A 13 TQELAEAFNKVDRSLFLPENLKDYAYAHTHEALPILPGINTTALNLGIFMLDELD--LHKGQKVLEIGTGIGYYTALIAE 90 (231)
T ss_dssp CHHHHHHHHHSCHHHHSCGGGGGGSSSSTTCCEEEETTEEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHH
T ss_pred CHHHHHHHHhCCHHHcCCcchhhhccccCCCceeeCCCCccCCHHHHHHHHHhcC--CCCCCEEEEEcCCCCHHHHHHHH
Confidence 78899999999999887753 788 88888888888889999998888886 77899999999999999999999
Q ss_pred HhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEEEecCCCCchHHHHHhhcccCcE
Q psy7829 154 MVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVIYYGGCVSEVPSRVLNQLKKGGR 233 (511)
Q Consensus 154 ~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~ 233 (511)
.. .+|+++|+++.+++.+++++... . +++++.+|+.+.++..++||+|+++.++++++.++.+.|||||+
T Consensus 91 ~~---~~v~~vD~~~~~~~~a~~~~~~~-----~--~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~ 160 (231)
T 1vbf_A 91 IV---DKVVSVEINEKMYNYASKLLSYY-----N--NIKLILGDGTLGYEEEKPYDRVVVWATAPTLLCKPYEQLKEGGI 160 (231)
T ss_dssp HS---SEEEEEESCHHHHHHHHHHHTTC-----S--SEEEEESCGGGCCGGGCCEEEEEESSBBSSCCHHHHHTEEEEEE
T ss_pred Hc---CEEEEEeCCHHHHHHHHHHHhhc-----C--CeEEEECCcccccccCCCccEEEECCcHHHHHHHHHHHcCCCcE
Confidence 85 57999999999999999998763 1 79999999987444457899999999999999999999999999
Q ss_pred EEEEEccCCCcceEEEEEEecCCeEEEEeecceEEEecc
Q psy7829 234 ILAPIGPMDDFQKLTQIDRFHDNTLQKTDLFEVAYDAIM 272 (511)
Q Consensus 234 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 272 (511)
+++.+.... ...+..+.+. .+.+....+....|.|+.
T Consensus 161 l~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 197 (231)
T 1vbf_A 161 MILPIGVGR-VQKLYKVIKK-GNSPSLENLGEVMFGRIG 197 (231)
T ss_dssp EEEEECSSS-SEEEEEEECC-TTSCEEEEEEEECCCBCC
T ss_pred EEEEEcCCC-ccEEEEEEEc-CCeeEEEEeccEEEEEcC
Confidence 999877553 3444444443 344555555555555554
No 9
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.67 E-value=7.7e-16 Score=164.70 Aligned_cols=119 Identities=15% Similarity=0.097 Sum_probs=89.7
Q ss_pred chhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhC--------------------------------------
Q psy7829 115 NAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVG-------------------------------------- 156 (511)
Q Consensus 115 ~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~-------------------------------------- 156 (511)
..+.+.+.++.+.. ..++..|||.+||||.+.+.++....
T Consensus 174 l~e~LAa~ll~~~~--~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~ 251 (703)
T 3v97_A 174 IKETLAAAIVMRSG--WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKG 251 (703)
T ss_dssp SCHHHHHHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHhhC--CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhc
Confidence 34556666776664 67888999999999999988887531
Q ss_pred ---CCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCC--CCCccEEEecCCCCch----------H
Q psy7829 157 ---PTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLP--EAPYDVIYYGGCVSEV----------P 221 (511)
Q Consensus 157 ---~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~fD~I~~~~~~~~~----------~ 221 (511)
+..+++|+|+++.+++.|++|+..+| ..+.++|.++|+.+...+ .+.||+|++|+|+..- .
T Consensus 252 ~~~~~~~i~G~Did~~av~~A~~N~~~ag----v~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly 327 (703)
T 3v97_A 252 LAEYSSHFYGSDSDARVIQRARTNARLAG----IGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALH 327 (703)
T ss_dssp HHHCCCCEEEEESCHHHHHHHHHHHHHTT----CGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHH
T ss_pred cccCCccEEEEECCHHHHHHHHHHHHHcC----CCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHH
Confidence 23579999999999999999999986 334699999999864322 2389999999997321 1
Q ss_pred ---HHHHhhcccCcEEEEEEc
Q psy7829 222 ---SRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 222 ---~~~~~~LkpgG~l~~~~~ 239 (511)
.+..+.+.|||.+++.++
T Consensus 328 ~~l~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 328 SLLGRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp HHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHHhhCCCCeEEEEeC
Confidence 234455668999998655
No 10
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.66 E-value=7e-16 Score=145.62 Aligned_cols=113 Identities=19% Similarity=0.286 Sum_probs=92.9
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEcc
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVG-PTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEAD 197 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 197 (511)
+...+..++...++++.+|||+|||+|..+..+++.+. ++.+|+|+|+|+.|++.|+++++..+ ...+++++++|
T Consensus 56 ~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~----~~~~v~~~~~D 131 (261)
T 4gek_A 56 IISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK----APTPVDVIEGD 131 (261)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC----CSSCEEEEESC
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc----cCceEEEeecc
Confidence 34444445555688999999999999999999999864 46699999999999999999998764 35689999999
Q ss_pred CCCCCCCCCCccEEEecCCCCch--------HHHHHhhcccCcEEEEE
Q psy7829 198 AREGYLPEAPYDVIYYGGCVSEV--------PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 198 ~~~~~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~ 237 (511)
+.+... +.||+|+++.+++++ ++++++.|||||.|++.
T Consensus 132 ~~~~~~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 132 IRDIAI--ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp TTTCCC--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccc--cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEE
Confidence 986433 569999999888654 36889999999999985
No 11
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.61 E-value=1.7e-14 Score=131.21 Aligned_cols=119 Identities=24% Similarity=0.281 Sum_probs=98.5
Q ss_pred ccchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeE
Q psy7829 113 VMNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVR 192 (511)
Q Consensus 113 ~~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~ 192 (511)
.++.+.+...+++.+. +.++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|+++++.++ ..++++
T Consensus 37 ~~~~~~~~~~~l~~l~--~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g----~~~~v~ 107 (204)
T 3njr_A 37 QITKSPMRALTLAALA--PRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYG----LSPRMR 107 (204)
T ss_dssp CCCCHHHHHHHHHHHC--CCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTT----CTTTEE
T ss_pred CCCcHHHHHHHHHhcC--CCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcC----CCCCEE
Confidence 4556667777777776 778999999999999999999987 4589999999999999999998864 233899
Q ss_pred EEEccCCCCCCCCCCccEEEecCCCCc-hHHHHHhhcccCcEEEEEEcc
Q psy7829 193 IVEADAREGYLPEAPYDVIYYGGCVSE-VPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 193 ~~~~d~~~~~~~~~~fD~I~~~~~~~~-~~~~~~~~LkpgG~l~~~~~~ 240 (511)
++++|+.+.+.....||+|+++..... +.+++.+.|||||++++....
T Consensus 108 ~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 108 AVQGTAPAALADLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp EEESCTTGGGTTSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEECS
T ss_pred EEeCchhhhcccCCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEecC
Confidence 999999874444467999999876644 678999999999999997653
No 12
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.59 E-value=1.3e-14 Score=128.87 Aligned_cols=119 Identities=24% Similarity=0.264 Sum_probs=97.7
Q ss_pred ccchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeE
Q psy7829 113 VMNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVR 192 (511)
Q Consensus 113 ~~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~ 192 (511)
.++.+.+...+++.+. ..++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|++++...+ ...++
T Consensus 7 ~~t~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~- 78 (178)
T 3hm2_A 7 QLTKQHVRALAISALA--PKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLG----VSDRI- 78 (178)
T ss_dssp CSHHHHHHHHHHHHHC--CCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTT----CTTSE-
T ss_pred cccHHHHHHHHHHHhc--ccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhC----CCCCE-
Confidence 3445566777777775 7788999999999999999999986 67899999999999999999998864 23378
Q ss_pred EEEccCCCCCCCC-CCccEEEecCCCCc--hHHHHHhhcccCcEEEEEEc
Q psy7829 193 IVEADAREGYLPE-APYDVIYYGGCVSE--VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 193 ~~~~d~~~~~~~~-~~fD~I~~~~~~~~--~~~~~~~~LkpgG~l~~~~~ 239 (511)
++.+|..+.++.. ++||+|+++.++++ +.+++.+.|||||++++...
T Consensus 79 ~~~~d~~~~~~~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 79 AVQQGAPRAFDDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp EEECCTTGGGGGCCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred EEecchHhhhhccCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence 8889986544332 78999999988876 77999999999999998654
No 13
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.59 E-value=2e-14 Score=130.83 Aligned_cols=117 Identities=26% Similarity=0.325 Sum_probs=98.8
Q ss_pred chhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEE
Q psy7829 115 NAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIV 194 (511)
Q Consensus 115 ~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 194 (511)
+...+.+.+++.+. +.++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|++++..++ .++++++
T Consensus 24 ~~~~i~~~~l~~l~--~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~ 95 (204)
T 3e05_A 24 TKQEVRAVTLSKLR--LQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFV-----ARNVTLV 95 (204)
T ss_dssp CCHHHHHHHHHHTT--CCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHT-----CTTEEEE
T ss_pred ChHHHHHHHHHHcC--CCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhC-----CCcEEEE
Confidence 55556677777776 7789999999999999999999985 77899999999999999999998864 4689999
Q ss_pred EccCCCCCCCCCCccEEEecCCCC---chHHHHHhhcccCcEEEEEEc
Q psy7829 195 EADAREGYLPEAPYDVIYYGGCVS---EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 195 ~~d~~~~~~~~~~fD~I~~~~~~~---~~~~~~~~~LkpgG~l~~~~~ 239 (511)
++|+.+.....++||+|+++.+.. .+.+++.+.|||||++++...
T Consensus 96 ~~d~~~~~~~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 96 EAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp ECCTTTTCTTSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred eCChhhhhhcCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence 999976554447899999998764 345889999999999999654
No 14
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.59 E-value=8.2e-15 Score=134.26 Aligned_cols=113 Identities=25% Similarity=0.342 Sum_probs=92.3
Q ss_pred HHHHHHHHHhh-cCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEcc
Q psy7829 119 QIADAAENLKL-HLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEAD 197 (511)
Q Consensus 119 ~~~~~~~~l~~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 197 (511)
+.+.++..+.. .++||.+|||+|||+|+++..+|+.+++.++|+++|+++.|++.+++++++ .+|+..+.+|
T Consensus 62 laa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~-------~~ni~~V~~d 134 (233)
T 4df3_A 62 LAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD-------RRNIFPILGD 134 (233)
T ss_dssp HHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT-------CTTEEEEESC
T ss_pred HHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh-------hcCeeEEEEe
Confidence 44545544432 478999999999999999999999999999999999999999999998765 3489999999
Q ss_pred CCCC---CCCCCCccEEEecCCCCc----hHHHHHhhcccCcEEEEEE
Q psy7829 198 AREG---YLPEAPYDVIYYGGCVSE----VPSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 198 ~~~~---~~~~~~fD~I~~~~~~~~----~~~~~~~~LkpgG~l~~~~ 238 (511)
.... ....+.+|+|+++.+.+. +..++.+.|||||++++.+
T Consensus 135 ~~~p~~~~~~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 135 ARFPEKYRHLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp TTCGGGGTTTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCccccccccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 8642 223478999999877765 3478899999999999865
No 15
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.56 E-value=2.6e-14 Score=134.92 Aligned_cols=114 Identities=25% Similarity=0.285 Sum_probs=95.2
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEE
Q psy7829 116 APNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVE 195 (511)
Q Consensus 116 ~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 195 (511)
.+.....+++.+. +.++.+|||+|||+|..+..+++.+ ..+|+++|+|+.+++.|++++...+ ..+++++++
T Consensus 21 ~~~~~~~l~~~~~--~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~----~~~~v~~~~ 92 (256)
T 1nkv_A 21 TEEKYATLGRVLR--MKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELG----VSERVHFIH 92 (256)
T ss_dssp CHHHHHHHHHHTC--CCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEE
T ss_pred CHHHHHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcC----CCcceEEEE
Confidence 3445666676665 7789999999999999999999987 3589999999999999999988764 345899999
Q ss_pred ccCCCCCCCCCCccEEEecCCCCch------HHHHHhhcccCcEEEEEE
Q psy7829 196 ADAREGYLPEAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 196 ~d~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~ 238 (511)
+|+.+... .++||+|++..+++++ ++++.++|||||++++..
T Consensus 93 ~d~~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 93 NDAAGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp SCCTTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred CChHhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 99987554 6889999998777655 588999999999999854
No 16
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.55 E-value=2.3e-14 Score=129.68 Aligned_cols=105 Identities=22% Similarity=0.359 Sum_probs=88.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC-CCCCCcc
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY-LPEAPYD 209 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD 209 (511)
++++.+|||+|||+|.++..+++.+++.++|+++|+++.+++.|++++..++ ..++++++++|+.... ...++||
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~fD 95 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN----LIDRVTLIKDGHQNMDKYIDCPVK 95 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT----CGGGEEEECSCGGGGGGTCCSCEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCCeEEEECCHHHHhhhccCCce
Confidence 7789999999999999999999998777899999999999999999998864 2368999999987542 2347899
Q ss_pred EEEecCCC---------------CchHHHHHhhcccCcEEEEEEc
Q psy7829 210 VIYYGGCV---------------SEVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 210 ~I~~~~~~---------------~~~~~~~~~~LkpgG~l~~~~~ 239 (511)
+|+++.++ ..+.+++.+.|||||++++...
T Consensus 96 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 96 AVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 99998765 1356889999999999998754
No 17
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.55 E-value=4.6e-14 Score=133.23 Aligned_cols=101 Identities=19% Similarity=0.179 Sum_probs=84.3
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCcc
Q psy7829 130 HLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYD 209 (511)
Q Consensus 130 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 209 (511)
.++++.+|||||||+|.++..++.+. +.++|+++|+++++++.|++++++.| .++++|+++|+.+.. +++||
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~g-----l~~v~~v~gDa~~l~--d~~FD 190 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLG-----VDGVNVITGDETVID--GLEFD 190 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHT-----CCSEEEEESCGGGGG--GCCCS
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcC-----CCCeEEEECchhhCC--CCCcC
Confidence 37899999999999998765544443 46799999999999999999998865 378999999998742 57899
Q ss_pred EEEecCCCC---chHHHHHhhcccCcEEEEEE
Q psy7829 210 VIYYGGCVS---EVPSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 210 ~I~~~~~~~---~~~~~~~~~LkpgG~l~~~~ 238 (511)
+|++..... .+++++.++|||||+|++..
T Consensus 191 vV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 191 VLMVAALAEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp EEEECTTCSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEEECCCccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 999877654 46789999999999999854
No 18
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.55 E-value=2.4e-14 Score=136.95 Aligned_cols=134 Identities=16% Similarity=0.185 Sum_probs=105.0
Q ss_pred CCCCCcccccCCCcccchhHHHH---HHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Q psy7829 99 EPYQDVSASLGYAGVMNAPNQIA---DAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASL 175 (511)
Q Consensus 99 ~~y~~~~~~~~~~~~~~~p~~~~---~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~ 175 (511)
..|.+..+.+..+..+++|.... .+++.+. ..++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|+
T Consensus 88 ~~f~~~~~~v~~~~lipr~~te~lv~~~l~~~~--~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~ 163 (284)
T 1nv8_A 88 KEFMGLSFLVEEGVFVPRPETEELVELALELIR--KYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIAR 163 (284)
T ss_dssp EEETTEEEECCTTSCCCCTTHHHHHHHHHHHHH--HHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHH
T ss_pred eEECCeEEEeCCCceecChhHHHHHHHHHHHhc--ccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHH
Confidence 35677777887788887775433 3444443 236789999999999999999998 6789999999999999999
Q ss_pred HHHhccCCCcCCCCCeEEEEccCCCCCCCCCCc---cEEEecCCCC-------------------------chHHHHH-h
Q psy7829 176 RNISKGNKDLLDSGRVRIVEADAREGYLPEAPY---DVIYYGGCVS-------------------------EVPSRVL-N 226 (511)
Q Consensus 176 ~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f---D~I~~~~~~~-------------------------~~~~~~~-~ 226 (511)
+|+..++ ...+++|+++|+.+... ++| |+|++++++. .+.+++. +
T Consensus 164 ~n~~~~~----l~~~v~~~~~D~~~~~~--~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~ 237 (284)
T 1nv8_A 164 KNAERHG----VSDRFFVRKGEFLEPFK--EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGR 237 (284)
T ss_dssp HHHHHTT----CTTSEEEEESSTTGGGG--GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHH
T ss_pred HHHHHcC----CCCceEEEECcchhhcc--cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHh
Confidence 9998865 23459999999986432 478 9999986653 2457888 9
Q ss_pred hcccCcEEEEEEccCC
Q psy7829 227 QLKKGGRILAPIGPMD 242 (511)
Q Consensus 227 ~LkpgG~l~~~~~~~~ 242 (511)
.|+|||.+++.++..+
T Consensus 238 ~l~pgG~l~~e~~~~q 253 (284)
T 1nv8_A 238 YDTSGKIVLMEIGEDQ 253 (284)
T ss_dssp CCCTTCEEEEECCTTC
T ss_pred cCCCCCEEEEEECchH
Confidence 9999999999877554
No 19
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.53 E-value=5.3e-14 Score=125.88 Aligned_cols=111 Identities=17% Similarity=0.198 Sum_probs=86.1
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCC
Q psy7829 121 ADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADARE 200 (511)
Q Consensus 121 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 200 (511)
......+...++++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++++.++ .+++++++.|...
T Consensus 10 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~-----~~~v~~~~~~~~~ 81 (185)
T 3mti_A 10 HMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLG-----IENTELILDGHEN 81 (185)
T ss_dssp HHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHT-----CCCEEEEESCGGG
T ss_pred HHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcC-----CCcEEEEeCcHHH
Confidence 3344445555778999999999999999999987 4689999999999999999998864 3689999977654
Q ss_pred CC-CCCCCccEEEecCCC-Cc--------------hHHHHHhhcccCcEEEEEEc
Q psy7829 201 GY-LPEAPYDVIYYGGCV-SE--------------VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 201 ~~-~~~~~fD~I~~~~~~-~~--------------~~~~~~~~LkpgG~l~~~~~ 239 (511)
.. ...++||+|+++... +. ..+++.+.|||||++++.+.
T Consensus 82 l~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 82 LDHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp GGGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 21 124789999988322 21 23788899999999998765
No 20
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.53 E-value=2.9e-14 Score=131.24 Aligned_cols=100 Identities=10% Similarity=0.163 Sum_probs=84.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCC-CCeEEEEccCCCCCC--CCCCcc
Q psy7829 133 DGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDS-GRVRIVEADAREGYL--PEAPYD 209 (511)
Q Consensus 133 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~--~~~~fD 209 (511)
++.+|||+|||+|+.+..+++.+++.++|+++|+++.+++.|+++++..+ .. ++++++++|+.+..+ ..++||
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g----~~~~~i~~~~gda~~~l~~~~~~~fD 131 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG----YSPSRVRFLLSRPLDVMSRLANDSYQ 131 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT----CCGGGEEEECSCHHHHGGGSCTTCEE
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCcCcEEEEEcCHHHHHHHhcCCCcC
Confidence 34599999999999999999988668999999999999999999999875 23 589999999865322 247899
Q ss_pred EEEecCCCCc---hHHHHHhhcccCcEEEE
Q psy7829 210 VIYYGGCVSE---VPSRVLNQLKKGGRILA 236 (511)
Q Consensus 210 ~I~~~~~~~~---~~~~~~~~LkpgG~l~~ 236 (511)
+|+++..... +.+.+.+.|||||.+++
T Consensus 132 ~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 132 LVFGQVSPMDLKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp EEEECCCTTTHHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEcCcHHHHHHHHHHHHHHcCCCcEEEE
Confidence 9999887654 34788999999999997
No 21
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.53 E-value=4.9e-14 Score=138.69 Aligned_cols=139 Identities=18% Similarity=0.230 Sum_probs=108.5
Q ss_pred CCCCcccccCCCcccchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHh
Q psy7829 100 PYQDVSASLGYAGVMNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNIS 179 (511)
Q Consensus 100 ~y~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~ 179 (511)
.|.+....+..+..+..|...+.+++.+. +.++.+|||+|||+|+++..+++.+++.++|+++|+++.+++.|++++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~--~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~ 151 (336)
T 2b25_A 74 ALEDYVVLMKRGTAITFPKDINMILSMMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYK 151 (336)
T ss_dssp CHHHHHHHSCCSSCCCCHHHHHHHHHHHT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHH
T ss_pred CHHHHhhhhcCCCcccCHHHHHHHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH
Confidence 44555556667788888888888888886 7899999999999999999999987777899999999999999999987
Q ss_pred ccC----CCcC--CCCCeEEEEccCCCCC--CCCCCccEEEecCCCCc-hHHHHHhhcccCcEEEEEEcc
Q psy7829 180 KGN----KDLL--DSGRVRIVEADAREGY--LPEAPYDVIYYGGCVSE-VPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 180 ~~~----~~~~--~~~~v~~~~~d~~~~~--~~~~~fD~I~~~~~~~~-~~~~~~~~LkpgG~l~~~~~~ 240 (511)
..+ .+.+ ..++++++.+|+.+.. .+.++||+|+++.+.++ ++.++.+.|||||.+++....
T Consensus 152 ~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 152 HWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp HHHHHHTTTCSSCCCCCEEEEESCTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEESS
T ss_pred HhhcccccccccccCCceEEEECChHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 521 0000 1358999999998643 23467999999876554 468999999999999987653
No 22
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.52 E-value=8e-14 Score=128.17 Aligned_cols=118 Identities=13% Similarity=0.123 Sum_probs=90.9
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEcc
Q psy7829 118 NQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEAD 197 (511)
Q Consensus 118 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 197 (511)
.....+++.+. ..++.+|||+|||+|.++..+++.. +..+|+++|+|+.+++.|++++...+.......+++++++|
T Consensus 16 ~~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 92 (217)
T 3jwh_A 16 QRMNGVVAALK--QSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGA 92 (217)
T ss_dssp HHHHHHHHHHH--HTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECC
T ss_pred HHHHHHHHHHH--hcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCC
Confidence 34555666665 4578899999999999999999875 56799999999999999999987653100001279999999
Q ss_pred CCCCCCCCCCccEEEecCCCCchH--------HHHHhhcccCcEEEEEE
Q psy7829 198 AREGYLPEAPYDVIYYGGCVSEVP--------SRVLNQLKKGGRILAPI 238 (511)
Q Consensus 198 ~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~l~~~~ 238 (511)
+.......++||+|++..+++++. +++.+.|||||.+++..
T Consensus 93 ~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 93 LTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp TTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred cccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 865443447899999998886543 67889999999776643
No 23
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.52 E-value=8.8e-14 Score=128.02 Aligned_cols=112 Identities=21% Similarity=0.318 Sum_probs=94.9
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCC
Q psy7829 121 ADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADARE 200 (511)
Q Consensus 121 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 200 (511)
..+++.+. +.++.+|||+|||+|.++..+++..++..+|+++|+++.+++.+++++...+ .++++++.+|+..
T Consensus 27 ~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~d~~~ 99 (219)
T 3dh0_A 27 EKVLKEFG--LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG-----LKNVEVLKSEENK 99 (219)
T ss_dssp HHHHHHHT--CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT-----CTTEEEEECBTTB
T ss_pred HHHHHHhC--CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC-----CCcEEEEeccccc
Confidence 44566665 6788999999999999999999998677899999999999999999988753 4589999999987
Q ss_pred CCCCCCCccEEEecCCCCch------HHHHHhhcccCcEEEEEEc
Q psy7829 201 GYLPEAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 201 ~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~~ 239 (511)
.....++||+|+++.+++++ .+++.+.|||||.+++...
T Consensus 100 ~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 144 (219)
T 3dh0_A 100 IPLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDW 144 (219)
T ss_dssp CSSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEe
Confidence 55556789999999887654 4789999999999998643
No 24
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.52 E-value=4.2e-14 Score=131.44 Aligned_cols=115 Identities=19% Similarity=0.308 Sum_probs=94.0
Q ss_pred chhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEE
Q psy7829 115 NAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIV 194 (511)
Q Consensus 115 ~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 194 (511)
.+|.....+...+. ..++.+|||+|||+|+.+..+++.. +.++|+++|+++.+++.|+++++..+ ..++++++
T Consensus 55 ~~~~~~~~l~~~~~--~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~ 127 (232)
T 3ntv_A 55 VDRLTLDLIKQLIR--MNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYH----FENQVRII 127 (232)
T ss_dssp CCHHHHHHHHHHHH--HHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTT----CTTTEEEE
T ss_pred cCHHHHHHHHHHHh--hcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEE
Confidence 35656666666555 4578899999999999999999964 67899999999999999999998865 34589999
Q ss_pred EccCCCCCC--CCCCccEEEecCCCCch---HHHHHhhcccCcEEEE
Q psy7829 195 EADAREGYL--PEAPYDVIYYGGCVSEV---PSRVLNQLKKGGRILA 236 (511)
Q Consensus 195 ~~d~~~~~~--~~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~l~~ 236 (511)
++|+.+..+ ..++||+|+++...... .+.+.+.|||||++++
T Consensus 128 ~~d~~~~~~~~~~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 128 EGNALEQFENVNDKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp ESCGGGCHHHHTTSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEE
T ss_pred ECCHHHHHHhhccCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEE
Confidence 999976433 14789999999877654 4788899999999987
No 25
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.51 E-value=1.6e-13 Score=129.53 Aligned_cols=118 Identities=27% Similarity=0.318 Sum_probs=98.5
Q ss_pred chhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEE
Q psy7829 115 NAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIV 194 (511)
Q Consensus 115 ~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 194 (511)
..|.....++..+. +.++.+|||+|||+|.++..+++.+++.++|+++|+++.+++.|+++++.++ ..++++++
T Consensus 77 ~~~~~~~~i~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~----~~~~v~~~ 150 (255)
T 3mb5_A 77 VHPKDAALIVAYAG--ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG----FDDRVTIK 150 (255)
T ss_dssp CCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT----CTTTEEEE
T ss_pred ccHhHHHHHHHhhC--CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC----CCCceEEE
Confidence 34555566677665 7889999999999999999999997678899999999999999999998865 23459999
Q ss_pred EccCCCCCCCCCCccEEEecCCCCc-hHHHHHhhcccCcEEEEEEc
Q psy7829 195 EADAREGYLPEAPYDVIYYGGCVSE-VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 195 ~~d~~~~~~~~~~fD~I~~~~~~~~-~~~~~~~~LkpgG~l~~~~~ 239 (511)
++|+.+.+ +.++||+|+++.+... +.+++.+.|||||.+++...
T Consensus 151 ~~d~~~~~-~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 151 LKDIYEGI-EEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp CSCGGGCC-CCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred ECchhhcc-CCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEEC
Confidence 99998754 3478999999877654 67999999999999998653
No 26
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.51 E-value=9.8e-14 Score=131.05 Aligned_cols=113 Identities=28% Similarity=0.419 Sum_probs=93.3
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccC
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADA 198 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 198 (511)
....+++.+. .+.++.+|||+|||+|..+..+++.. + ++|+++|+|+.+++.+++++...+ ..++++++++|+
T Consensus 33 ~~~~~l~~l~-~~~~~~~vLDiG~G~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~~d~ 105 (257)
T 3f4k_A 33 ATRKAVSFIN-ELTDDAKIADIGCGTGGQTLFLADYV-K-GQITGIDLFPDFIEIFNENAVKAN----CADRVKGITGSM 105 (257)
T ss_dssp HHHHHHTTSC-CCCTTCEEEEETCTTSHHHHHHHHHC-C-SEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECCT
T ss_pred HHHHHHHHHh-cCCCCCeEEEeCCCCCHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHHcC----CCCceEEEECCh
Confidence 4444555443 35678899999999999999999987 3 389999999999999999998865 345699999999
Q ss_pred CCCCCCCCCccEEEecCCCCch-----HHHHHhhcccCcEEEEEE
Q psy7829 199 REGYLPEAPYDVIYYGGCVSEV-----PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 199 ~~~~~~~~~fD~I~~~~~~~~~-----~~~~~~~LkpgG~l~~~~ 238 (511)
.....+.++||+|++..+++++ .+++.+.|||||++++..
T Consensus 106 ~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 106 DNLPFQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp TSCSSCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhCCCCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence 7655456899999999888764 478999999999999864
No 27
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.51 E-value=8.2e-14 Score=132.45 Aligned_cols=113 Identities=24% Similarity=0.339 Sum_probs=93.2
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccC
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADA 198 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 198 (511)
....++..+. .+.++.+|||||||+|.++..+++. +.++|+|+|+|+.+++.|++++...+ ..++++++++|+
T Consensus 33 ~~~~~l~~l~-~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~ 105 (267)
T 3kkz_A 33 VTLKALSFID-NLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSG----LQNRVTGIVGSM 105 (267)
T ss_dssp HHHHHHTTCC-CCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECCT
T ss_pred HHHHHHHhcc-cCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcC----CCcCcEEEEcCh
Confidence 3444455443 3568899999999999999999987 45789999999999999999998865 345799999999
Q ss_pred CCCCCCCCCccEEEecCCCCch-----HHHHHhhcccCcEEEEEE
Q psy7829 199 REGYLPEAPYDVIYYGGCVSEV-----PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 199 ~~~~~~~~~fD~I~~~~~~~~~-----~~~~~~~LkpgG~l~~~~ 238 (511)
.+...+.++||+|++..+++++ ++++.+.|||||.+++..
T Consensus 106 ~~~~~~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 106 DDLPFRNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp TSCCCCTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred hhCCCCCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEE
Confidence 8755456889999999888664 478999999999999864
No 28
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.51 E-value=1.5e-13 Score=131.03 Aligned_cols=112 Identities=19% Similarity=0.261 Sum_probs=92.5
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccC
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADA 198 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 198 (511)
+...+++.+. +.++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.+++++...+ ..++++++.+|+
T Consensus 49 ~~~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~~~~~~~d~ 120 (273)
T 3bus_A 49 LTDEMIALLD--VRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAG----LANRVTFSYADA 120 (273)
T ss_dssp HHHHHHHHSC--CCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECCT
T ss_pred HHHHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcC----CCcceEEEECcc
Confidence 3344445443 5688999999999999999999876 4689999999999999999988764 345799999999
Q ss_pred CCCCCCCCCccEEEecCCCCch------HHHHHhhcccCcEEEEEE
Q psy7829 199 REGYLPEAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 199 ~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~ 238 (511)
.+...+.++||+|++..+++++ ++++.++|||||++++..
T Consensus 121 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 121 MDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp TSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 8755556789999999988765 378999999999999854
No 29
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.51 E-value=1.6e-13 Score=132.94 Aligned_cols=108 Identities=20% Similarity=0.179 Sum_probs=90.4
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCC
Q psy7829 121 ADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADARE 200 (511)
Q Consensus 121 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 200 (511)
..+++.+. ++++.+|||||||+|.++..+++..+ .+|+++|+|+.+++.|++++...+ ..++++++++|+.+
T Consensus 62 ~~~~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~ 133 (302)
T 3hem_A 62 KLALDKLN--LEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVD----SPRRKEVRIQGWEE 133 (302)
T ss_dssp HHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSC----CSSCEEEEECCGGG
T ss_pred HHHHHHcC--CCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcC----CCCceEEEECCHHH
Confidence 33444443 67899999999999999999999873 689999999999999999998865 34589999999976
Q ss_pred CCCCCCCccEEEecCCCCch---------------HHHHHhhcccCcEEEEEEc
Q psy7829 201 GYLPEAPYDVIYYGGCVSEV---------------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 201 ~~~~~~~fD~I~~~~~~~~~---------------~~~~~~~LkpgG~l~~~~~ 239 (511)
. .++||+|++..+++++ .+++.++|||||++++...
T Consensus 134 ~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 134 F---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp C---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred c---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 4 4889999999888666 4789999999999998543
No 30
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.51 E-value=1.3e-13 Score=126.64 Aligned_cols=115 Identities=25% Similarity=0.262 Sum_probs=88.4
Q ss_pred HHHHHHHHHHh-hcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEc
Q psy7829 118 NQIADAAENLK-LHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEA 196 (511)
Q Consensus 118 ~~~~~~~~~l~-~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 196 (511)
.+.+.++..+. ..+++|.+|||+|||+|+.+..+++..++.++|+++|+++.+++...+.+.. ..|+.++++
T Consensus 60 kla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-------r~nv~~i~~ 132 (232)
T 3id6_C 60 KLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-------RPNIFPLLA 132 (232)
T ss_dssp HHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-------CTTEEEEEC
T ss_pred HHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-------cCCeEEEEc
Confidence 34555555553 2367999999999999999999999988899999999999997665554443 248999999
Q ss_pred cCCCCC---CCCCCccEEEecCCCCchH----HHHHhhcccCcEEEEEEc
Q psy7829 197 DAREGY---LPEAPYDVIYYGGCVSEVP----SRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 197 d~~~~~---~~~~~fD~I~~~~~~~~~~----~~~~~~LkpgG~l~~~~~ 239 (511)
|+.... ...++||+|+++.+.+... ..+.+.|||||+|++++.
T Consensus 133 Da~~~~~~~~~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 133 DARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp CTTCGGGTTTTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccchhhhccccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 987532 1236899999998775433 345569999999999764
No 31
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.51 E-value=1.9e-14 Score=135.35 Aligned_cols=102 Identities=24% Similarity=0.175 Sum_probs=83.2
Q ss_pred HHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC
Q psy7829 124 AENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL 203 (511)
Q Consensus 124 ~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 203 (511)
++.|......+.+|||||||+|..+..+++.+ .+|+|+|+|+.|++.|++ .++++++++|+.+...
T Consensus 30 ~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~-----------~~~v~~~~~~~e~~~~ 95 (257)
T 4hg2_A 30 FRWLGEVAPARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALR-----------HPRVTYAVAPAEDTGL 95 (257)
T ss_dssp HHHHHHHSSCSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCC-----------CTTEEEEECCTTCCCC
T ss_pred HHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhh-----------cCCceeehhhhhhhcc
Confidence 34444345567899999999999999999875 369999999999987642 3479999999987666
Q ss_pred CCCCccEEEecCCCCch-----HHHHHhhcccCcEEEEEEc
Q psy7829 204 PEAPYDVIYYGGCVSEV-----PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 204 ~~~~fD~I~~~~~~~~~-----~~~~~~~LkpgG~l~~~~~ 239 (511)
++++||+|++..+++++ .+++.++|||||.|++...
T Consensus 96 ~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 96 PPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp CSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEEC
Confidence 67899999999998765 3789999999999988543
No 32
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.51 E-value=9e-14 Score=127.74 Aligned_cols=112 Identities=21% Similarity=0.293 Sum_probs=91.9
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEcc
Q psy7829 118 NQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEAD 197 (511)
Q Consensus 118 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 197 (511)
.+...+++.+. .+++ +|||+|||+|.++..+++. +..+++++|+++.+++.|++++...+ ..++++++++|
T Consensus 31 ~~~~~~~~~~~--~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~----~~~~~~~~~~d 101 (219)
T 3dlc_A 31 IIAENIINRFG--ITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADAN----LNDRIQIVQGD 101 (219)
T ss_dssp HHHHHHHHHHC--CCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECB
T ss_pred HHHHHHHHhcC--CCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhcc----ccCceEEEEcC
Confidence 34555555554 4455 9999999999999999997 45789999999999999999998865 34589999999
Q ss_pred CCCCCCCCCCccEEEecCCCCch------HHHHHhhcccCcEEEEEE
Q psy7829 198 AREGYLPEAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 198 ~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~ 238 (511)
+.+...+.++||+|+++.+++++ ++++.+.|||||.+++..
T Consensus 102 ~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 102 VHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp TTBCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHCCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEe
Confidence 98755556889999999887654 478999999999999853
No 33
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.51 E-value=3.6e-14 Score=129.05 Aligned_cols=116 Identities=13% Similarity=0.065 Sum_probs=85.2
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCC-------CcCCC
Q psy7829 116 APNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNK-------DLLDS 188 (511)
Q Consensus 116 ~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~-------~~~~~ 188 (511)
.|.+.. .++.+. +.++.+|||+|||+|..+..+++.. .+|+|+|+|+.|++.|+++...... .....
T Consensus 8 ~~~l~~-~~~~l~--~~~~~~vLD~GCG~G~~~~~la~~g---~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~ 81 (203)
T 1pjz_A 8 NKDLQQ-YWSSLN--VVPGARVLVPLCGKSQDMSWLSGQG---YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAA 81 (203)
T ss_dssp THHHHH-HHHHHC--CCTTCEEEETTTCCSHHHHHHHHHC---CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEEC
T ss_pred CHHHHH-HHHhcc--cCCCCEEEEeCCCCcHhHHHHHHCC---CeEEEEeCCHHHHHHHHHHccCCcccccccccccccC
Confidence 343433 344443 5688999999999999999999973 3799999999999999988643100 00013
Q ss_pred CCeEEEEccCCCCCCCC-CCccEEEecCCCCch--------HHHHHhhcccCcEEEEE
Q psy7829 189 GRVRIVEADAREGYLPE-APYDVIYYGGCVSEV--------PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 189 ~~v~~~~~d~~~~~~~~-~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~ 237 (511)
.+++++++|+.+..... ++||+|++...++++ .+++.++|||||++++.
T Consensus 82 ~~v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 82 PGIEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp SSSEEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred CccEEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 57999999998754433 689999988777554 36789999999985443
No 34
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.51 E-value=1e-13 Score=132.51 Aligned_cols=132 Identities=20% Similarity=0.312 Sum_probs=101.8
Q ss_pred CCCCcccccCCCcccchhHHHHHHHHHHhhcC-CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Q psy7829 100 PYQDVSASLGYAGVMNAPNQIADAAENLKLHL-VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNI 178 (511)
Q Consensus 100 ~y~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~-~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~ 178 (511)
.|.+..+.+..+..+++|.....+...+. .+ .++.+|||+|||+|.++..+++.. +..+|+++|+|+.+++.|++++
T Consensus 76 ~f~~~~~~~~~~~~ipr~~te~l~~~~l~-~~~~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~ 153 (276)
T 2b3t_A 76 EFWSLPLFVSPATLIPRPDTECLVEQALA-RLPEQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNA 153 (276)
T ss_dssp EETTEEEECCTTSCCCCTTHHHHHHHHHH-HSCSSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHH
T ss_pred EECCceEEeCCCCcccCchHHHHHHHHHH-hcccCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH
Confidence 45666677677777777764433333332 22 567899999999999999999886 6789999999999999999999
Q ss_pred hccCCCcCCCCCeEEEEccCCCCCCCCCCccEEEecCCCCc-------------------------------hHHHHHhh
Q psy7829 179 SKGNKDLLDSGRVRIVEADAREGYLPEAPYDVIYYGGCVSE-------------------------------VPSRVLNQ 227 (511)
Q Consensus 179 ~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~-------------------------------~~~~~~~~ 227 (511)
..++ .++++++++|+.+... .++||+|+++.++.. +.+.+.+.
T Consensus 154 ~~~~-----~~~v~~~~~d~~~~~~-~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~ 227 (276)
T 2b3t_A 154 QHLA-----IKNIHILQSDWFSALA-GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNA 227 (276)
T ss_dssp HHHT-----CCSEEEECCSTTGGGT-TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGG
T ss_pred HHcC-----CCceEEEEcchhhhcc-cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHh
Confidence 8864 4479999999986443 468999999976521 23677899
Q ss_pred cccCcEEEEEEc
Q psy7829 228 LKKGGRILAPIG 239 (511)
Q Consensus 228 LkpgG~l~~~~~ 239 (511)
|||||.+++.++
T Consensus 228 LkpgG~l~~~~~ 239 (276)
T 2b3t_A 228 LVSGGFLLLEHG 239 (276)
T ss_dssp EEEEEEEEEECC
T ss_pred cCCCCEEEEEEC
Confidence 999999999754
No 35
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.50 E-value=1.5e-13 Score=127.55 Aligned_cols=102 Identities=25% Similarity=0.374 Sum_probs=84.8
Q ss_pred cCCCCCEEEEEcCC-ccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCC-CCCCCC
Q psy7829 130 HLVDGAKVLDLGSG-SGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREG-YLPEAP 207 (511)
Q Consensus 130 ~~~~~~~vLDiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~ 207 (511)
.++++.+|||+||| +|.++..+++.. ..+|+++|+++.+++.|++++..++ . +++++++|+... ....++
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-----~-~v~~~~~d~~~~~~~~~~~ 123 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNN-----S-NVRLVKSNGGIIKGVVEGT 123 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTT-----C-CCEEEECSSCSSTTTCCSC
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhC-----C-CcEEEeCCchhhhhcccCc
Confidence 36789999999999 999999999986 5689999999999999999998864 3 899999996421 112478
Q ss_pred ccEEEecCCCC-------------------------chHHHHHhhcccCcEEEEEEc
Q psy7829 208 YDVIYYGGCVS-------------------------EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 208 fD~I~~~~~~~-------------------------~~~~~~~~~LkpgG~l~~~~~ 239 (511)
||+|+++.++. .+.+.+.+.|||||++++.+.
T Consensus 124 fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 180 (230)
T 3evz_A 124 FDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLP 180 (230)
T ss_dssp EEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred eeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEec
Confidence 99999997763 345788899999999998654
No 36
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.50 E-value=1.3e-13 Score=127.00 Aligned_cols=118 Identities=14% Similarity=0.193 Sum_probs=90.6
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEc
Q psy7829 117 PNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEA 196 (511)
Q Consensus 117 p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 196 (511)
+.....+.+.+. ..++.+|||+|||+|.++..+++.. +..+|+++|+|+.+++.|++++...+.......+++++++
T Consensus 15 ~~~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 91 (219)
T 3jwg_A 15 QQRLGTVVAVLK--SVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQS 91 (219)
T ss_dssp HHHHHHHHHHHH--HTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEEC
T ss_pred HHHHHHHHHHHh--hcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeC
Confidence 344555666665 4578899999999999999999875 5679999999999999999998765310000127999999
Q ss_pred cCCCCCCCCCCccEEEecCCCCchH--------HHHHhhcccCcEEEEE
Q psy7829 197 DAREGYLPEAPYDVIYYGGCVSEVP--------SRVLNQLKKGGRILAP 237 (511)
Q Consensus 197 d~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~l~~~ 237 (511)
|+.......++||+|++..+++++. +++.+.|||||.++..
T Consensus 92 d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 92 SLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp CSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred cccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 9865444457899999998876553 5688999999966553
No 37
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.50 E-value=2.2e-13 Score=124.93 Aligned_cols=102 Identities=16% Similarity=0.208 Sum_probs=87.2
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC--CCCCCcc
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY--LPEAPYD 209 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD 209 (511)
.++.+|||+|||+|.++..+++.. |..+++|+|+++.+++.|++++...+ .++++++++|+.+.. .+.++||
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~D 113 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVG-----VPNIKLLWVDGSDLTDYFEDGEID 113 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHC-----CSSEEEEECCSSCGGGTSCTTCCS
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcC-----CCCEEEEeCCHHHHHhhcCCCCCC
Confidence 467899999999999999999986 67899999999999999999998764 468999999998632 3457899
Q ss_pred EEEecCCCC--------------chHHHHHhhcccCcEEEEEEc
Q psy7829 210 VIYYGGCVS--------------EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 210 ~I~~~~~~~--------------~~~~~~~~~LkpgG~l~~~~~ 239 (511)
+|+++.+.+ .+.+.+.+.|||||.+++...
T Consensus 114 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 114 RLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred EEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 999997764 366889999999999998654
No 38
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.50 E-value=1.1e-13 Score=131.02 Aligned_cols=108 Identities=22% Similarity=0.321 Sum_probs=90.1
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCC
Q psy7829 121 ADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADARE 200 (511)
Q Consensus 121 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 200 (511)
..+++.+. ..++.+|||+|||+|.++..+++.. + +|+++|+|+.+++.|++++...+ .++++++++|+..
T Consensus 27 ~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~gvD~s~~~l~~a~~~~~~~~-----~~~v~~~~~d~~~ 96 (260)
T 1vl5_A 27 AKLMQIAA--LKGNEEVLDVATGGGHVANAFAPFV-K--KVVAFDLTEDILKVARAFIEGNG-----HQQVEYVQGDAEQ 96 (260)
T ss_dssp HHHHHHHT--CCSCCEEEEETCTTCHHHHHHGGGS-S--EEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEECCC-C
T ss_pred HHHHHHhC--CCCCCEEEEEeCCCCHHHHHHHHhC-C--EEEEEeCCHHHHHHHHHHHHhcC-----CCceEEEEecHHh
Confidence 44566665 6788999999999999999999875 3 79999999999999999988753 4589999999987
Q ss_pred CCCCCCCccEEEecCCCCch------HHHHHhhcccCcEEEEEE
Q psy7829 201 GYLPEAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 201 ~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~ 238 (511)
...++++||+|++..+++++ ++++.++|||||++++..
T Consensus 97 l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 97 MPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp CCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 55556899999999888654 478999999999999853
No 39
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.50 E-value=1.9e-14 Score=139.87 Aligned_cols=178 Identities=14% Similarity=0.117 Sum_probs=119.9
Q ss_pred cCCCCCCCCcccCCCccHHHHHHHHHHcCCCCCH-HH-HHHHHhCCC-CCccCCCCCCCcccccCCCcccchhHHHHHHH
Q psy7829 48 VIPPPDNLNHFKNEGTCQTDLVNHLRDIGKIRTE-RV-AQAFYKVDR-GNFANEEPYQDVSASLGYAGVMNAPNQIADAA 124 (511)
Q Consensus 48 ~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~-~~a~~~~~r-~~~~~~~~y~~~~~~~~~~~~~~~p~~~~~~~ 124 (511)
...+++..+++|+...+..++.+.|...|+...+ .+ ..++..... ..+.....|.. |....+......+.
T Consensus 39 ~~~~~p~~~RvN~~k~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------G~~~~qd~~s~l~~ 111 (315)
T 1ixk_A 39 MEKPLPRCFRVNTLKISVQDLVKRLNKKGFQFKRVPWAKEGFCLTREPFSITSTPEFLT-------GLIYIQEASSMYPP 111 (315)
T ss_dssp TTSCCCCEEEECTTTSCHHHHHHHHHHTTCEEEEETTEEEEEEEEECSSCGGGSHHHHT-------TSEEECCHHHHHHH
T ss_pred cCCCCCeEEEEeCCCCCHHHHHHHHHhCCCeeeECCCCCceEEEeCCCCCcccChhHhc-------ceEEEeCHHHHHHH
Confidence 4455667889999999999999999888752110 00 000000000 00000111222 11111221222233
Q ss_pred HHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCC
Q psy7829 125 ENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLP 204 (511)
Q Consensus 125 ~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 204 (511)
..+. +.++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++++| ..+++++++|+......
T Consensus 112 ~~l~--~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g-----~~~v~~~~~D~~~~~~~ 184 (315)
T 1ixk_A 112 VALD--PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG-----VLNVILFHSSSLHIGEL 184 (315)
T ss_dssp HHHC--CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT-----CCSEEEESSCGGGGGGG
T ss_pred HHhC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC-----CCeEEEEECChhhcccc
Confidence 4444 7789999999999999999999987666899999999999999999998864 45799999998764333
Q ss_pred CCCccEEEecCCCC----------------------------chHHHHHhhcccCcEEEEEEc
Q psy7829 205 EAPYDVIYYGGCVS----------------------------EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 205 ~~~fD~I~~~~~~~----------------------------~~~~~~~~~LkpgG~l~~~~~ 239 (511)
.++||+|+++.++. .+++++.+.|||||+++++.-
T Consensus 185 ~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 185 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 46899999987652 344678899999999998643
No 40
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.50 E-value=1.6e-13 Score=128.10 Aligned_cols=113 Identities=22% Similarity=0.322 Sum_probs=93.8
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEc
Q psy7829 117 PNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEA 196 (511)
Q Consensus 117 p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 196 (511)
+.....+++.+. ++++.+|||+|||+|.++..+++.. + +|+++|+++.+++.+++++...+ .++++++++
T Consensus 7 ~~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~ 76 (239)
T 1xxl_A 7 HHSLGLMIKTAE--CRAEHRVLDIGAGAGHTALAFSPYV-Q--ECIGVDATKEMVEVASSFAQEKG-----VENVRFQQG 76 (239)
T ss_dssp HHHHHHHHHHHT--CCTTCEEEEESCTTSHHHHHHGGGS-S--EEEEEESCHHHHHHHHHHHHHHT-----CCSEEEEEC
T ss_pred CCCcchHHHHhC--cCCCCEEEEEccCcCHHHHHHHHhC-C--EEEEEECCHHHHHHHHHHHHHcC-----CCCeEEEec
Confidence 334455677776 7899999999999999999999875 3 79999999999999999988753 458999999
Q ss_pred cCCCCCCCCCCccEEEecCCCCch------HHHHHhhcccCcEEEEEEc
Q psy7829 197 DAREGYLPEAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 197 d~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~~ 239 (511)
|+......+++||+|++..+++++ +.++.++|||||.+++...
T Consensus 77 d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 77 TAESLPFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp BTTBCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccCCCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 998755456889999999887654 4789999999999998543
No 41
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.50 E-value=5.7e-14 Score=127.97 Aligned_cols=109 Identities=17% Similarity=0.214 Sum_probs=89.0
Q ss_pred HHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCC
Q psy7829 125 ENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLP 204 (511)
Q Consensus 125 ~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 204 (511)
+.+...++++.+|||||||+|++++.+++.. +..+|+++|+++.+++.|++|++.+| ..++++++.+|+.+..++
T Consensus 7 ~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~g----l~~~i~~~~~d~l~~l~~ 81 (225)
T 3kr9_A 7 ELVASFVSQGAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAHG----LKEKIQVRLANGLAAFEE 81 (225)
T ss_dssp HHHHTTSCTTEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTT----CTTTEEEEECSGGGGCCG
T ss_pred HHHHHhCCCCCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEEECchhhhccc
Confidence 3444457789999999999999999999974 77899999999999999999999986 345799999999776554
Q ss_pred CCCccEEEecCCC----CchHHHHHhhcccCcEEEEEE
Q psy7829 205 EAPYDVIYYGGCV----SEVPSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 205 ~~~fD~I~~~~~~----~~~~~~~~~~LkpgG~l~~~~ 238 (511)
..+||+|++..+- ..++....+.|+|+|++++.-
T Consensus 82 ~~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~ 119 (225)
T 3kr9_A 82 TDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQP 119 (225)
T ss_dssp GGCCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEE
T ss_pred CcCCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 3379998876543 445677888999999999853
No 42
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.49 E-value=2.1e-13 Score=131.80 Aligned_cols=114 Identities=18% Similarity=0.093 Sum_probs=93.7
Q ss_pred HHHHHHHHHh--hcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEc
Q psy7829 119 QIADAAENLK--LHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEA 196 (511)
Q Consensus 119 ~~~~~~~~l~--~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 196 (511)
....+++.+. ..+.++.+|||+|||+|..+..+++..+ .+|+++|+|+.+++.|++++...+ ..++++++++
T Consensus 66 ~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~----~~~~~~~~~~ 139 (297)
T 2o57_A 66 TDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAG----LADNITVKYG 139 (297)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHT----CTTTEEEEEC
T ss_pred HHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcC----CCcceEEEEc
Confidence 4455666661 0267889999999999999999999863 489999999999999999987764 3468999999
Q ss_pred cCCCCCCCCCCccEEEecCCCCch------HHHHHhhcccCcEEEEEE
Q psy7829 197 DAREGYLPEAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 197 d~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~ 238 (511)
|+.+.+.++++||+|++..+++++ ++++.++|||||++++..
T Consensus 140 d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 140 SFLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp CTTSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 998755556889999999887654 478999999999999854
No 43
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.49 E-value=1.8e-13 Score=131.11 Aligned_cols=125 Identities=27% Similarity=0.377 Sum_probs=103.0
Q ss_pred CcccchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhcc-CCCcCCCC
Q psy7829 111 AGVMNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKG-NKDLLDSG 189 (511)
Q Consensus 111 ~~~~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-~~~~~~~~ 189 (511)
...+..|.....++..+. +.++.+|||+|||+|.++..+++..++.++|+++|+++.+++.|++++... +. ..+
T Consensus 79 ~~~~~~~~~~~~i~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~---~~~ 153 (280)
T 1i9g_A 79 GPQVIYPKDAAQIVHEGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ---PPD 153 (280)
T ss_dssp CSCCCCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS---CCT
T ss_pred cceeecHHHHHHHHHHcC--CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC---CCC
Confidence 444556777777777776 788999999999999999999998777889999999999999999998764 20 245
Q ss_pred CeEEEEccCCCCCCCCCCccEEEecCCCC-chHHHHHhhcccCcEEEEEEcc
Q psy7829 190 RVRIVEADAREGYLPEAPYDVIYYGGCVS-EVPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 190 ~v~~~~~d~~~~~~~~~~fD~I~~~~~~~-~~~~~~~~~LkpgG~l~~~~~~ 240 (511)
+++++++|+.+...+.++||+|+++.+-. .+.+++.+.|+|||.+++.+..
T Consensus 154 ~v~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 154 NWRLVVSDLADSELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp TEEEECSCGGGCCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred cEEEEECchHhcCCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 89999999987544457899999987654 5678999999999999997653
No 44
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.49 E-value=1.3e-13 Score=129.33 Aligned_cols=117 Identities=18% Similarity=0.124 Sum_probs=84.9
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhc----------cCCCc
Q psy7829 116 APNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISK----------GNKDL 185 (511)
Q Consensus 116 ~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~----------~~~~~ 185 (511)
.|.+...+...+. ..++.+|||+|||+|..+..|++.. .+|+|+|+|+.+++.|+++... .+...
T Consensus 53 ~~~l~~~~~~~~~--~~~~~~vLD~GCG~G~~~~~La~~G---~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~ 127 (252)
T 2gb4_A 53 HQLLKKHLDTFLK--GQSGLRVFFPLCGKAIEMKWFADRG---HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKV 127 (252)
T ss_dssp CHHHHHHHHHHHT--TCCSCEEEETTCTTCTHHHHHHHTT---CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEE
T ss_pred CHHHHHHHHHhcc--CCCCCeEEEeCCCCcHHHHHHHHCC---CeEEEEECCHHHHHHHHHhcccccccccccccccccc
Confidence 3444444433332 3578899999999999999999873 3799999999999999877531 00000
Q ss_pred --CCCCCeEEEEccCCCCCCC-CCCccEEEecCCCCch--------HHHHHhhcccCcEEEEE
Q psy7829 186 --LDSGRVRIVEADAREGYLP-EAPYDVIYYGGCVSEV--------PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 186 --~~~~~v~~~~~d~~~~~~~-~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~ 237 (511)
-...+++++++|+.+.... .++||+|++...+.++ .+++.++|||||++++.
T Consensus 128 ~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 128 FKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp EEETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred cccCCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 0135799999999875443 2789999988777544 36789999999999753
No 45
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.48 E-value=2.6e-13 Score=121.82 Aligned_cols=117 Identities=15% Similarity=0.029 Sum_probs=91.6
Q ss_pred HHHHHHHHHHhhc-CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEc
Q psy7829 118 NQIADAAENLKLH-LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEA 196 (511)
Q Consensus 118 ~~~~~~~~~l~~~-~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 196 (511)
.+...+++.+... ..++.+|||+|||+|.++..++.. ...+|+++|+|+.+++.|+++++.++ .++++++++
T Consensus 28 ~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~v~~~~~ 100 (189)
T 3p9n_A 28 RVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALG-----LSGATLRRG 100 (189)
T ss_dssp HHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHT-----CSCEEEEES
T ss_pred HHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcC-----CCceEEEEc
Confidence 3555566666532 147889999999999999988775 34689999999999999999998864 368999999
Q ss_pred cCCCCC--CCCCCccEEEecCCCCch-------HHHHHh--hcccCcEEEEEEccC
Q psy7829 197 DAREGY--LPEAPYDVIYYGGCVSEV-------PSRVLN--QLKKGGRILAPIGPM 241 (511)
Q Consensus 197 d~~~~~--~~~~~fD~I~~~~~~~~~-------~~~~~~--~LkpgG~l~~~~~~~ 241 (511)
|+.+.. ...++||+|+++.++++. ...+.+ +|||||.+++.....
T Consensus 101 d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 101 AVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp CHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred cHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 987532 124789999999888752 356777 999999999976543
No 46
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.48 E-value=2.3e-13 Score=124.20 Aligned_cols=100 Identities=22% Similarity=0.233 Sum_probs=80.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCC---CCCCCC
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREG---YLPEAP 207 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~ 207 (511)
++++.+|||+|||+|..+..+++..+ .++|+|+|+|+.+++.+.+.++. ..++.++.+|+... .+..++
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~-------~~~v~~~~~d~~~~~~~~~~~~~ 126 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRE-------RNNIIPLLFDASKPWKYSGIVEK 126 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHH-------CSSEEEECSCTTCGGGTTTTCCC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhc-------CCCeEEEEcCCCCchhhcccccc
Confidence 56889999999999999999999875 67999999999988777666654 23789999998753 122378
Q ss_pred ccEEEecCCCCc----hHHHHHhhcccCcEEEEEE
Q psy7829 208 YDVIYYGGCVSE----VPSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 208 fD~I~~~~~~~~----~~~~~~~~LkpgG~l~~~~ 238 (511)
||+|+++...+. +++++.+.|||||++++.+
T Consensus 127 fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 127 VDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 999999854432 2478899999999999975
No 47
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.48 E-value=8.4e-14 Score=127.01 Aligned_cols=109 Identities=17% Similarity=0.241 Sum_probs=89.3
Q ss_pred HHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCC
Q psy7829 125 ENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLP 204 (511)
Q Consensus 125 ~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 204 (511)
+.+...++++.+|||||||+|++++.+++.. +..+|+++|+++.+++.|++|++.++ ..++++++++|+.+.+.+
T Consensus 13 ~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~~al~~A~~N~~~~g----l~~~I~~~~gD~l~~~~~ 87 (230)
T 3lec_A 13 QKVANYVPKGARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVNGPYQSALKNVSEHG----LTSKIDVRLANGLSAFEE 87 (230)
T ss_dssp HHHHTTSCTTEEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSHHHHHHHHHHHHHTT----CTTTEEEEECSGGGGCCG
T ss_pred HHHHHhCCCCCEEEEECCchHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEECchhhcccc
Confidence 3444457789999999999999999999974 77789999999999999999999986 356799999999886654
Q ss_pred CCCccEEEecCCC----CchHHHHHhhcccCcEEEEEE
Q psy7829 205 EAPYDVIYYGGCV----SEVPSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 205 ~~~fD~I~~~~~~----~~~~~~~~~~LkpgG~l~~~~ 238 (511)
...||+|++.++- ..++....+.|+++|+|++.-
T Consensus 88 ~~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 88 ADNIDTITICGMGGRLIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred ccccCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEEC
Confidence 4479998866553 344567778899999998853
No 48
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.48 E-value=1e-13 Score=127.26 Aligned_cols=102 Identities=19% Similarity=0.231 Sum_probs=86.1
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCC---CCCCCCc
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREG---YLPEAPY 208 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~f 208 (511)
.++.+|||||||+|.++..+|+.. +...|+|+|+|+.+++.|++++...+ .+|++++++|+.+. ..+.++|
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~-----l~nv~~~~~Da~~~l~~~~~~~~~ 106 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEG-----LSNLRVMCHDAVEVLHKMIPDNSL 106 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTT-----CSSEEEECSCHHHHHHHHSCTTCE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhC-----CCcEEEEECCHHHHHHHHcCCCCh
Confidence 467899999999999999999986 77899999999999999999998753 56899999998753 1345899
Q ss_pred cEEEecCCCC--------------chHHHHHhhcccCcEEEEEEc
Q psy7829 209 DVIYYGGCVS--------------EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 209 D~I~~~~~~~--------------~~~~~~~~~LkpgG~l~~~~~ 239 (511)
|.|+++.+.+ .+.+.+.+.|||||.+++.+.
T Consensus 107 d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 107 RMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp EEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred heEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 9999984432 256889999999999999765
No 49
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.48 E-value=2.5e-13 Score=127.51 Aligned_cols=103 Identities=18% Similarity=0.280 Sum_probs=85.9
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCC---CCCCCC
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREG---YLPEAP 207 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~ 207 (511)
..++.+|||||||+|+.+..+++.+++.++|+++|+++.+++.|++++...+ ..++++++++|+.+. ....++
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g----~~~~v~~~~~d~~~~l~~~~~~~~ 136 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG----VDQRVTLREGPALQSLESLGECPA 136 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT----CTTTEEEEESCHHHHHHTCCSCCC
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEEcCHHHHHHhcCCCCC
Confidence 4578899999999999999999988557899999999999999999998865 345899999998642 222358
Q ss_pred ccEEEecCCCCc---hHHHHHhhcccCcEEEEE
Q psy7829 208 YDVIYYGGCVSE---VPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 208 fD~I~~~~~~~~---~~~~~~~~LkpgG~l~~~ 237 (511)
||+|+++..... +.+++.+.|||||.+++.
T Consensus 137 fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 137 FDLIFIDADKPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred eEEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence 999999887654 347889999999999874
No 50
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.47 E-value=6.1e-13 Score=125.62 Aligned_cols=122 Identities=26% Similarity=0.285 Sum_probs=100.6
Q ss_pred cccchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhcc-CCCcCCCCC
Q psy7829 112 GVMNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKG-NKDLLDSGR 190 (511)
Q Consensus 112 ~~~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-~~~~~~~~~ 190 (511)
.....|.....+++.+. +.++.+|||+|||+|.++..+++.+++..+|+++|+++.+++.|+++++.+ + .++
T Consensus 77 ~~~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-----~~~ 149 (258)
T 2pwy_A 77 ATPTYPKDASAMVTLLD--LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-----VEN 149 (258)
T ss_dssp SCCCCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-----CCC
T ss_pred cccccchHHHHHHHHcC--CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-----CCC
Confidence 33445556666777765 788999999999999999999999767789999999999999999998874 3 358
Q ss_pred eEEEEccCCCCCCCCCCccEEEecCCCC-chHHHHHhhcccCcEEEEEEcc
Q psy7829 191 VRIVEADAREGYLPEAPYDVIYYGGCVS-EVPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 191 v~~~~~d~~~~~~~~~~fD~I~~~~~~~-~~~~~~~~~LkpgG~l~~~~~~ 240 (511)
++++.+|+.+...+.++||+|+++.+.. .+++++.+.|||||.+++....
T Consensus 150 v~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 150 VRFHLGKLEEAELEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLPN 200 (258)
T ss_dssp EEEEESCGGGCCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESC
T ss_pred EEEEECchhhcCCCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 9999999987533447899999987654 5779999999999999997653
No 51
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.47 E-value=2.8e-13 Score=126.04 Aligned_cols=100 Identities=19% Similarity=0.292 Sum_probs=86.0
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
..++.+|||+|||+|..+..+++.. +..+++++|+|+.+++.|++++... .+++++++|+.+.... ++||+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~~~~~-~~fD~ 112 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGN-------LKVKYIEADYSKYDFE-EKYDM 112 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSC-------TTEEEEESCTTTCCCC-SCEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccC-------CCEEEEeCchhccCCC-CCceE
Confidence 4578899999999999999999986 6789999999999999999997653 2899999999875544 88999
Q ss_pred EEecCCCCch--------HHHHHhhcccCcEEEEEEc
Q psy7829 211 IYYGGCVSEV--------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 211 I~~~~~~~~~--------~~~~~~~LkpgG~l~~~~~ 239 (511)
|++..+++++ ++++.+.|||||.+++...
T Consensus 113 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 113 VVSALSIHHLEDEDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 9999887654 4678999999999998654
No 52
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.47 E-value=1.6e-13 Score=130.22 Aligned_cols=109 Identities=19% Similarity=0.326 Sum_probs=90.6
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccC
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADA 198 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 198 (511)
....+++.+. +.++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.|+++... . ++++++++|+
T Consensus 43 ~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~------~-~~~~~~~~d~ 111 (266)
T 3ujc_A 43 ATKKILSDIE--LNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSG------N-NKIIFEANDI 111 (266)
T ss_dssp HHHHHTTTCC--CCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCS------C-TTEEEEECCT
T ss_pred HHHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhc------C-CCeEEEECcc
Confidence 3344444443 5688999999999999999999986 46899999999999999988654 1 5899999999
Q ss_pred CCCCCCCCCccEEEecCCCCch--------HHHHHhhcccCcEEEEEE
Q psy7829 199 REGYLPEAPYDVIYYGGCVSEV--------PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 199 ~~~~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~~ 238 (511)
.....+.++||+|++..+++++ ++++.+.|||||.+++..
T Consensus 112 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 112 LTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp TTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 8755556899999999988877 378999999999999864
No 53
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.47 E-value=2.7e-13 Score=124.12 Aligned_cols=102 Identities=18% Similarity=0.268 Sum_probs=85.5
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC--CCCCCcc
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY--LPEAPYD 209 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD 209 (511)
.++.+|||||||+|.++..+++.. +..+|+|+|+|+.+++.|++++...+ .+|++++++|+.... .+.++||
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~-----~~nv~~~~~d~~~l~~~~~~~~~d 110 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSE-----AQNVKLLNIDADTLTDVFEPGEVK 110 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSC-----CSSEEEECCCGGGHHHHCCTTSCC
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcC-----CCCEEEEeCCHHHHHhhcCcCCcC
Confidence 467899999999999999999986 77899999999999999999998753 568999999987522 2357899
Q ss_pred EEEecCCCC--------------chHHHHHhhcccCcEEEEEEc
Q psy7829 210 VIYYGGCVS--------------EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 210 ~I~~~~~~~--------------~~~~~~~~~LkpgG~l~~~~~ 239 (511)
.|+++.+.+ .+++++.+.|||||.+++.+.
T Consensus 111 ~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 111 RVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred EEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 999875543 246889999999999998764
No 54
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.47 E-value=2.9e-13 Score=131.69 Aligned_cols=103 Identities=17% Similarity=0.136 Sum_probs=87.9
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
+.++.+|||+|||+|.++..+++.. ..+|+|+|+++.+++.|++++...+ ..++++++++|+.+...+.++||+
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~fD~ 188 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELR----IDDHVRSRVCNMLDTPFDKGAVTA 188 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECCTTSCCCCTTCEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcC----CCCceEEEECChhcCCCCCCCEeE
Confidence 4578899999999999999999986 3589999999999999999998865 345899999999875545689999
Q ss_pred EEecCCCCch-----HHHHHhhcccCcEEEEEEc
Q psy7829 211 IYYGGCVSEV-----PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 211 I~~~~~~~~~-----~~~~~~~LkpgG~l~~~~~ 239 (511)
|++..+++++ ++++.+.|||||++++...
T Consensus 189 V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 189 SWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 9998877554 4789999999999998643
No 55
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.46 E-value=1.2e-13 Score=126.93 Aligned_cols=108 Identities=11% Similarity=0.186 Sum_probs=88.7
Q ss_pred HHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCC
Q psy7829 125 ENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLP 204 (511)
Q Consensus 125 ~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 204 (511)
+.+...++++.+|||||||+|++++.+++.. +..+|+++|+++.+++.|++|++.+| ..++++++++|+.+.+.+
T Consensus 13 ~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~g----l~~~I~v~~gD~l~~~~~ 87 (244)
T 3gnl_A 13 EKVASYITKNERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVDGPFQSAQKQVRSSG----LTEQIDVRKGNGLAVIEK 87 (244)
T ss_dssp HHHHTTCCSSEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTT----CTTTEEEEECSGGGGCCG
T ss_pred HHHHHhCCCCCEEEEECCccHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEEecchhhccCc
Confidence 3444457889999999999999999999974 77789999999999999999999976 345799999999876654
Q ss_pred CCCccEEEecCCC----CchHHHHHhhcccCcEEEEE
Q psy7829 205 EAPYDVIYYGGCV----SEVPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 205 ~~~fD~I~~~~~~----~~~~~~~~~~LkpgG~l~~~ 237 (511)
..+||+|++..+- ..++....+.|+++++|++.
T Consensus 88 ~~~~D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq 124 (244)
T 3gnl_A 88 KDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQ 124 (244)
T ss_dssp GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEE
T ss_pred cccccEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEE
Confidence 3469998875543 34557778899999999885
No 56
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.46 E-value=1.2e-13 Score=127.48 Aligned_cols=114 Identities=16% Similarity=0.249 Sum_probs=87.7
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEc
Q psy7829 117 PNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEA 196 (511)
Q Consensus 117 p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 196 (511)
|.....+...+. ..++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.|+++++.++ ..++++++++
T Consensus 44 ~~~~~~l~~l~~--~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~~~ 117 (221)
T 3u81_A 44 DAKGQIMDAVIR--EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG----LQDKVTILNG 117 (221)
T ss_dssp HHHHHHHHHHHH--HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT----CGGGEEEEES
T ss_pred HHHHHHHHHHHH--hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC----CCCceEEEEC
Confidence 434343333333 4467899999999999999999987567899999999999999999998865 3457999999
Q ss_pred cCCCCCC--C----CCCccEEEecCCCCchH------HHHHhhcccCcEEEEE
Q psy7829 197 DAREGYL--P----EAPYDVIYYGGCVSEVP------SRVLNQLKKGGRILAP 237 (511)
Q Consensus 197 d~~~~~~--~----~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~l~~~ 237 (511)
|+.+..+ . .++||+|+++...++.. ..+ ++|||||.+++.
T Consensus 118 d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~ 169 (221)
T 3u81_A 118 ASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLAD 169 (221)
T ss_dssp CHHHHGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEES
T ss_pred CHHHHHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEe
Confidence 9753211 1 16899999998776554 223 899999999884
No 57
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.46 E-value=3.3e-14 Score=135.57 Aligned_cols=175 Identities=18% Similarity=0.110 Sum_probs=116.2
Q ss_pred CCCCCCcccCCCccHHHHHHHHHHcCCCCCHHHH-HHHHhCCC-CCccCCCCCCCcccccCCCcccchhHHHHHHHHHHh
Q psy7829 51 PPDNLNHFKNEGTCQTDLVNHLRDIGKIRTERVA-QAFYKVDR-GNFANEEPYQDVSASLGYAGVMNAPNQIADAAENLK 128 (511)
Q Consensus 51 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~a~~~~~r-~~~~~~~~y~~~~~~~~~~~~~~~p~~~~~~~~~l~ 128 (511)
+....++.|+...+..++.+.|...|+...+.+. .++...++ ..+.....|..+.+.++.... ..+...+.
T Consensus 8 ~~~~~~rvn~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~~s-------~l~~~~l~ 80 (274)
T 3ajd_A 8 EKMQFIRVNTLKINPEVLKKRLENKGVVLEKTFLDYAFEVKKSPFSIGSTPEYLFGYYMPQSISS-------MIPPIVLN 80 (274)
T ss_dssp -CCEEEEECTTTCCHHHHHHHHHTTTCEEEECSSTTEEEEEECSSCTTSSHHHHTTSEEECCSGG-------GHHHHHHC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHCCCeecCCCCCceEEEecCCCCcccChhhhCCeEEEeCHHH-------HHHHHHhC
Confidence 3456778888889999999999887752111000 00000000 000011122222222221111 12233444
Q ss_pred hcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC----C
Q psy7829 129 LHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL----P 204 (511)
Q Consensus 129 ~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~ 204 (511)
..++.+|||+|||+|..+..+++.....++|+++|+++.+++.++++++..| ..+++++++|+..... .
T Consensus 81 --~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g-----~~~v~~~~~D~~~~~~~~~~~ 153 (274)
T 3ajd_A 81 --PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG-----VLNTIIINADMRKYKDYLLKN 153 (274)
T ss_dssp --CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEESCHHHHHHHHHHT
T ss_pred --CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC-----CCcEEEEeCChHhcchhhhhc
Confidence 6789999999999999999999987445899999999999999999999864 4589999999865322 1
Q ss_pred CCCccEEEecCCCC------------------------chHHHHHhhcccCcEEEEEEc
Q psy7829 205 EAPYDVIYYGGCVS------------------------EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 205 ~~~fD~I~~~~~~~------------------------~~~~~~~~~LkpgG~l~~~~~ 239 (511)
.++||+|+++.++. .+++.+.+.|||||+++++..
T Consensus 154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 46899999997663 234678889999999998754
No 58
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.46 E-value=9.1e-14 Score=129.29 Aligned_cols=116 Identities=16% Similarity=0.237 Sum_probs=89.1
Q ss_pred CCcccch-hHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHH---hCCCceEEEEeCCHHHHHHHHHHHhccCCCc
Q psy7829 110 YAGVMNA-PNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHM---VGPTGKVIGVEHIPELIEASLRNISKGNKDL 185 (511)
Q Consensus 110 ~~~~~~~-p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~---~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~ 185 (511)
.+..+++ |.....+.+.+. ..++.+|||||||+|+.+..+++. +++.++|+++|+++.+++.|+.
T Consensus 59 ~~~~~~~~p~~~~~l~~~l~--~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~--------- 127 (236)
T 2bm8_A 59 RGLRMLKDPDTQAVYHDMLW--ELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS--------- 127 (236)
T ss_dssp TTEECCSCHHHHHHHHHHHH--HHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG---------
T ss_pred ccccccCCHHHHHHHHHHHH--hcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc---------
Confidence 3455666 877777777665 345789999999999999999997 4577899999999999988761
Q ss_pred CCCCCeEEEEccCCCC--C--CCCCCccEEEecCCCCc---hHHHHHh-hcccCcEEEEE
Q psy7829 186 LDSGRVRIVEADAREG--Y--LPEAPYDVIYYGGCVSE---VPSRVLN-QLKKGGRILAP 237 (511)
Q Consensus 186 ~~~~~v~~~~~d~~~~--~--~~~~~fD~I~~~~~~~~---~~~~~~~-~LkpgG~l~~~ 237 (511)
..++++++++|+.+. + ....+||+|+++..-.. ++.++.+ +|||||++++.
T Consensus 128 -~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 128 -DMENITLHQGDCSDLTTFEHLREMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp -GCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEEC
T ss_pred -cCCceEEEECcchhHHHHHhhccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEE
Confidence 134799999999864 1 12247999998876333 3466775 99999999983
No 59
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.45 E-value=1.9e-13 Score=128.03 Aligned_cols=103 Identities=21% Similarity=0.301 Sum_probs=85.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC-------
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL------- 203 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------- 203 (511)
..++.+|||||||+|+.+..+++.+++.++|+++|+++.+++.|+++++..+ ..++++++.+|+.+..+
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g----~~~~i~~~~gda~~~l~~l~~~~~ 152 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG----VDHKIDFREGPALPVLDEMIKDEK 152 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT----CGGGEEEEESCHHHHHHHHHHSGG
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCCeEEEECCHHHHHHHHHhccC
Confidence 4567899999999999999999998557899999999999999999998865 34579999999864221
Q ss_pred CCCCccEEEecCCCCc---hHHHHHhhcccCcEEEEE
Q psy7829 204 PEAPYDVIYYGGCVSE---VPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 204 ~~~~fD~I~~~~~~~~---~~~~~~~~LkpgG~l~~~ 237 (511)
..++||+|+++..... +.+.+.+.|||||.+++.
T Consensus 153 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 153 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp GTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred CCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEe
Confidence 1378999999876543 347889999999999873
No 60
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.45 E-value=1.8e-13 Score=126.40 Aligned_cols=103 Identities=20% Similarity=0.318 Sum_probs=84.9
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCC-----C
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLP-----E 205 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-----~ 205 (511)
..++.+|||+|||+|+.+..+++.+++.++|+++|+++.+++.|++++...+ ..++++++++|+.+..+. .
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~~ 131 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN----LNDRVEVRTGLALDSLQQIENEKY 131 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEESCHHHHHHHHHHTTC
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEEcCHHHHHHHHHhcCC
Confidence 4578899999999999999999998547899999999999999999998865 345699999998642211 1
Q ss_pred CCccEEEecCCCCc---hHHHHHhhcccCcEEEEE
Q psy7829 206 APYDVIYYGGCVSE---VPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 206 ~~fD~I~~~~~~~~---~~~~~~~~LkpgG~l~~~ 237 (511)
++||+|+++..... +.+.+.+.|||||.+++.
T Consensus 132 ~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 132 EPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp CCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred CCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEe
Confidence 57999999887654 347889999999988874
No 61
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.45 E-value=1.3e-13 Score=128.17 Aligned_cols=117 Identities=17% Similarity=0.267 Sum_probs=95.5
Q ss_pred cchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEE
Q psy7829 114 MNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRI 193 (511)
Q Consensus 114 ~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 193 (511)
+.+|.....+...+. ..++.+|||+|||+|..+..+++.+ +.++|+++|+++.+++.|++++...+ ..+++++
T Consensus 37 ~~~~~~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~ 109 (233)
T 2gpy_A 37 IMDLLGMESLLHLLK--MAAPARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALG----LESRIEL 109 (233)
T ss_dssp CCCHHHHHHHHHHHH--HHCCSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTT----CTTTEEE
T ss_pred CcCHHHHHHHHHHHh--ccCCCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEE
Confidence 456666666666665 5578899999999999999999987 57899999999999999999998864 2357999
Q ss_pred EEccCCCCCC-C--CCCccEEEecCCCCc---hHHHHHhhcccCcEEEEE
Q psy7829 194 VEADAREGYL-P--EAPYDVIYYGGCVSE---VPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 194 ~~~d~~~~~~-~--~~~fD~I~~~~~~~~---~~~~~~~~LkpgG~l~~~ 237 (511)
+.+|+.+..+ . .++||+|+++.+.+. +.+.+.+.|||||.+++.
T Consensus 110 ~~~d~~~~~~~~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 110 LFGDALQLGEKLELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp ECSCGGGSHHHHTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EECCHHHHHHhcccCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 9999876322 1 368999999988753 447889999999999985
No 62
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.45 E-value=3e-14 Score=133.09 Aligned_cols=103 Identities=17% Similarity=0.243 Sum_probs=86.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCC------
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLP------ 204 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 204 (511)
..++.+|||+|||+|+.+..+++.+++.++|+++|+++.+++.|+++++..+ ..++++++++|+.+..+.
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g----~~~~i~~~~gda~~~l~~~~~~~~ 133 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK----QEHKIKLRLGPALDTLHSLLNEGG 133 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT----CTTTEEEEESCHHHHHHHHHHHHC
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEEcCHHHHHHHHhhccC
Confidence 4467899999999999999999988558899999999999999999999875 346899999998653221
Q ss_pred CCCccEEEecCCCCch---HHHHHhhcccCcEEEEE
Q psy7829 205 EAPYDVIYYGGCVSEV---PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 205 ~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~l~~~ 237 (511)
.++||+|+++...... .+.+.+.|||||.+++.
T Consensus 134 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 134 EHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp SSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEE
Confidence 3789999998875443 47889999999999984
No 63
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.45 E-value=7e-13 Score=131.31 Aligned_cols=121 Identities=21% Similarity=0.103 Sum_probs=98.6
Q ss_pred ccchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeE
Q psy7829 113 VMNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVR 192 (511)
Q Consensus 113 ~~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~ 192 (511)
....+.+.+.++..+. ..++.+|||+|||+|.+++.++...++..+++|+|+++.+++.|++|++.+| .++++
T Consensus 185 a~l~~~la~~l~~~~~--~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g-----~~~i~ 257 (354)
T 3tma_A 185 GSLTPVLAQALLRLAD--ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG-----LSWIR 257 (354)
T ss_dssp CSCCHHHHHHHHHHTT--CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT-----CTTCE
T ss_pred CCcCHHHHHHHHHHhC--CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC-----CCceE
Confidence 3345556666666665 6788999999999999999999987567889999999999999999999875 33899
Q ss_pred EEEccCCCCCCCCCCccEEEecCCCC--------------chHHHHHhhcccCcEEEEEEcc
Q psy7829 193 IVEADAREGYLPEAPYDVIYYGGCVS--------------EVPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 193 ~~~~d~~~~~~~~~~fD~I~~~~~~~--------------~~~~~~~~~LkpgG~l~~~~~~ 240 (511)
+.++|+.+.......||+|++++++. .+.+.+.+.|||||.+++....
T Consensus 258 ~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 258 FLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp EEECCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred EEeCChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 99999987544446799999998873 2336788999999999997653
No 64
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.45 E-value=1.5e-13 Score=132.37 Aligned_cols=106 Identities=23% Similarity=0.273 Sum_probs=82.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCC--------------------------
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKD-------------------------- 184 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~-------------------------- 184 (511)
..++.+|||||||+|.++..+++.+ +..+|+|+|+++.+++.|++++...+..
T Consensus 44 ~~~~~~VLDiGCG~G~~~~~la~~~-~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (292)
T 3g07_A 44 WFRGRDVLDLGCNVGHLTLSIACKW-GPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRK 122 (292)
T ss_dssp GTTTSEEEEESCTTCHHHHHHHHHT-CCSEEEEEESCHHHHHHHHHTC--------------------------------
T ss_pred hcCCCcEEEeCCCCCHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccc
Confidence 3468899999999999999999997 5579999999999999999987653200
Q ss_pred ---------------------------cCCCCCeEEEEccCCCCC-----CCCCCccEEEecCCCCch------------
Q psy7829 185 ---------------------------LLDSGRVRIVEADAREGY-----LPEAPYDVIYYGGCVSEV------------ 220 (511)
Q Consensus 185 ---------------------------~~~~~~v~~~~~d~~~~~-----~~~~~fD~I~~~~~~~~~------------ 220 (511)
.....+++|+++|+.... ...++||+|++..+++++
T Consensus 123 ~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~ 202 (292)
T 3g07_A 123 RSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRM 202 (292)
T ss_dssp -------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHH
Confidence 000158999999987543 235789999999887443
Q ss_pred HHHHHhhcccCcEEEEE
Q psy7829 221 PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 221 ~~~~~~~LkpgG~l~~~ 237 (511)
++++.++|||||+|++.
T Consensus 203 l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 203 FRRIYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHhCCCcEEEEe
Confidence 47889999999999985
No 65
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.44 E-value=7.2e-13 Score=126.58 Aligned_cols=117 Identities=28% Similarity=0.380 Sum_probs=97.8
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEE
Q psy7829 116 APNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVE 195 (511)
Q Consensus 116 ~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 195 (511)
.|.....++..+. +.++.+|||+|||+|.++..+++.+++.++|+++|+++.+++.|++++...+ ..++++++.
T Consensus 97 ~~~~~~~i~~~~~--~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~v~~~~ 170 (277)
T 1o54_A 97 YPKDSSFIAMMLD--VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG----LIERVTIKV 170 (277)
T ss_dssp CHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT----CGGGEEEEC
T ss_pred CHHHHHHHHHHhC--CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC----CCCCEEEEE
Confidence 4445566666665 7789999999999999999999986678899999999999999999998754 235899999
Q ss_pred ccCCCCCCCCCCccEEEecCCCC-chHHHHHhhcccCcEEEEEEc
Q psy7829 196 ADAREGYLPEAPYDVIYYGGCVS-EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 196 ~d~~~~~~~~~~fD~I~~~~~~~-~~~~~~~~~LkpgG~l~~~~~ 239 (511)
+|+.+.+ +.++||+|+++.+.. .+.+++.+.|+|||.+++...
T Consensus 171 ~d~~~~~-~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 171 RDISEGF-DEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp CCGGGCC-SCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred CCHHHcc-cCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 9988753 346899999987665 567899999999999999765
No 66
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.44 E-value=8.8e-13 Score=126.69 Aligned_cols=99 Identities=19% Similarity=0.172 Sum_probs=84.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
+.++.+|||||||+|.++..+++..+ .+|+++|+|+.+++.+++++...+ ..++++++.+|+.+.. ++||+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~----~~~~~~~~~~d~~~~~---~~fD~ 132 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSE----NLRSKRVLLAGWEQFD---EPVDR 132 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCC----CCSCEEEEESCGGGCC---CCCSE
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcC----CCCCeEEEECChhhCC---CCeeE
Confidence 56889999999999999999997763 389999999999999999988754 3468999999986532 78999
Q ss_pred EEecCCCCch--------HHHHHhhcccCcEEEEEE
Q psy7829 211 IYYGGCVSEV--------PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 211 I~~~~~~~~~--------~~~~~~~LkpgG~l~~~~ 238 (511)
|++..+++++ .+++.++|||||.+++..
T Consensus 133 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 133 IVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp EEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999887665 378899999999999854
No 67
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.44 E-value=4.3e-13 Score=128.63 Aligned_cols=114 Identities=18% Similarity=0.283 Sum_probs=92.5
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEcc
Q psy7829 118 NQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEAD 197 (511)
Q Consensus 118 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 197 (511)
.....+++.+. .+.++.+|||+|||+|..+..+++.+++..+|+++|+|+.+++.|++++...+ .+++++++|
T Consensus 8 ~~~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~------~~v~~~~~d 80 (284)
T 3gu3_A 8 DYVSFLVNTVW-KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP------YDSEFLEGD 80 (284)
T ss_dssp HHHHHHHHTTS-CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS------SEEEEEESC
T ss_pred HHHHHHHHHHh-ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC------CceEEEEcc
Confidence 34555555543 35678999999999999999999987435799999999999999999988742 389999999
Q ss_pred CCCCCCCCCCccEEEecCCCCch------HHHHHhhcccCcEEEEEEc
Q psy7829 198 AREGYLPEAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 198 ~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~~ 239 (511)
+.+... .++||+|++...++++ .+++.+.|||||.+++...
T Consensus 81 ~~~~~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 81 ATEIEL-NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp TTTCCC-SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred hhhcCc-CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 987444 4789999999887654 3789999999999998543
No 68
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.44 E-value=5.3e-13 Score=129.04 Aligned_cols=103 Identities=17% Similarity=0.190 Sum_probs=87.1
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhcc-CCCcCCCCCeEEEEccCCCCCCCC----
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKG-NKDLLDSGRVRIVEADAREGYLPE---- 205 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-~~~~~~~~~v~~~~~d~~~~~~~~---- 205 (511)
..++.+|||+|||+|..+..+++.+.+..+|+|+|+|+.+++.|++++... + ..++++++++|+.+.....
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~ 109 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPD----TYKNVSFKISSSDDFKFLGADSV 109 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-----CCTTEEEEECCTTCCGGGCTTTT
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccC----CCCceEEEEcCHHhCCccccccc
Confidence 457899999999999999999987646789999999999999999998874 2 3568999999998644333
Q ss_pred --CCccEEEecCCCCch-----HHHHHhhcccCcEEEEE
Q psy7829 206 --APYDVIYYGGCVSEV-----PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 206 --~~fD~I~~~~~~~~~-----~~~~~~~LkpgG~l~~~ 237 (511)
++||+|++..+++++ .+++.+.|||||.+++.
T Consensus 110 ~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 110 DKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp TSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEE
Confidence 789999999887653 47899999999999883
No 69
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.44 E-value=8.2e-13 Score=121.27 Aligned_cols=107 Identities=21% Similarity=0.290 Sum_probs=87.1
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCC
Q psy7829 121 ADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADARE 200 (511)
Q Consensus 121 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 200 (511)
..+++.+. ...++.+|||+|||+|.++..+++. ..+|+++|+++.+++.+++ . ..++++++++|+.+
T Consensus 35 ~~~~~~l~-~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~---~------~~~~~~~~~~d~~~ 101 (218)
T 3ou2_A 35 PAALERLR-AGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR---H------GLDNVEFRQQDLFD 101 (218)
T ss_dssp HHHHHHHT-TTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG---G------CCTTEEEEECCTTS
T ss_pred HHHHHHHh-cCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh---c------CCCCeEEEeccccc
Confidence 34555554 3567789999999999999999998 3479999999999999987 1 34689999999987
Q ss_pred CCCCCCCccEEEecCCCCch--------HHHHHhhcccCcEEEEEEccC
Q psy7829 201 GYLPEAPYDVIYYGGCVSEV--------PSRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 201 ~~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~~~~~ 241 (511)
. ...++||+|+++..++++ ++++.+.|||||.+++.....
T Consensus 102 ~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 102 W-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp C-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred C-CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 6 456899999999888654 367889999999999976544
No 70
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.44 E-value=5.7e-13 Score=127.90 Aligned_cols=102 Identities=20% Similarity=0.250 Sum_probs=85.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC-CCCCCcc
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY-LPEAPYD 209 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD 209 (511)
..++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|++++...+ ..++++++++|+.+.. ...++||
T Consensus 66 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~fD 138 (285)
T 4htf_A 66 GPQKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKG----VSDNMQFIHCAAQDVASHLETPVD 138 (285)
T ss_dssp CSSCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-C----CGGGEEEEESCGGGTGGGCSSCEE
T ss_pred CCCCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcC----CCcceEEEEcCHHHhhhhcCCCce
Confidence 345789999999999999999987 3479999999999999999998764 2368999999998654 3458899
Q ss_pred EEEecCCCCch------HHHHHhhcccCcEEEEEEc
Q psy7829 210 VIYYGGCVSEV------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 210 ~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~~ 239 (511)
+|++..+++++ ++++.++|||||.+++...
T Consensus 139 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 139 LILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 99999888654 4789999999999998654
No 71
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.44 E-value=1.3e-12 Score=120.68 Aligned_cols=110 Identities=21% Similarity=0.258 Sum_probs=88.9
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCC
Q psy7829 121 ADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADARE 200 (511)
Q Consensus 121 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 200 (511)
..+.+.+...+.++.+|||+|||+|.++..+++.. + +++++|+++.+++.|++++... ..+++++++|+.+
T Consensus 26 ~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~d~~~ 96 (227)
T 1ve3_A 26 ETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYG-F--EVVGVDISEDMIRKAREYAKSR------ESNVEFIVGDARK 96 (227)
T ss_dssp HHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHT------TCCCEEEECCTTS
T ss_pred HHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcC-C--EEEEEECCHHHHHHHHHHHHhc------CCCceEEECchhc
Confidence 33455555456678999999999999999999875 4 8999999999999999998764 2579999999887
Q ss_pred CCCCCCCccEEEecCC--CCc------hHHHHHhhcccCcEEEEEEc
Q psy7829 201 GYLPEAPYDVIYYGGC--VSE------VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 201 ~~~~~~~fD~I~~~~~--~~~------~~~~~~~~LkpgG~l~~~~~ 239 (511)
...+.++||+|+++.+ ..+ +.+++.+.|||||.+++...
T Consensus 97 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 97 LSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp CCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 4444578999999988 443 34788999999999998654
No 72
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.44 E-value=3.9e-13 Score=128.35 Aligned_cols=103 Identities=26% Similarity=0.387 Sum_probs=89.3
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
+.++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.+++++...+ .++++++.+|+.....+.++||+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~ 108 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNG-----IKNVKFLQANIFSLPFEDSSFDH 108 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEECCGGGCCSCTTCEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC-----CCCcEEEEcccccCCCCCCCeeE
Confidence 4688999999999999999999985 77899999999999999999988753 45899999999875555689999
Q ss_pred EEecCCCCch------HHHHHhhcccCcEEEEEEc
Q psy7829 211 IYYGGCVSEV------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 211 I~~~~~~~~~------~~~~~~~LkpgG~l~~~~~ 239 (511)
|++..+++++ ++++.+.|||||.+++...
T Consensus 109 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 109 IFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 9999887654 4789999999999998653
No 73
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.44 E-value=2.6e-13 Score=123.13 Aligned_cols=118 Identities=16% Similarity=0.082 Sum_probs=88.0
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccC
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADA 198 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 198 (511)
+...+++.+... .++.+|||+|||+|.++..++... ..+|+++|+|+.+++.|+++++.++. ..++++++++|+
T Consensus 40 ~~~~l~~~l~~~-~~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~---~~~~v~~~~~d~ 113 (201)
T 2ift_A 40 VKETLFNWLMPY-IHQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKC---SSEQAEVINQSS 113 (201)
T ss_dssp HHHHHHHHHHHH-HTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTC---CTTTEEEECSCH
T ss_pred HHHHHHHHHHHh-cCCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCC---CccceEEEECCH
Confidence 444555555411 267899999999999999877763 35899999999999999999988641 116899999998
Q ss_pred CCCCC--CCCC-ccEEEecCCCC-----chHHHH--HhhcccCcEEEEEEccCC
Q psy7829 199 REGYL--PEAP-YDVIYYGGCVS-----EVPSRV--LNQLKKGGRILAPIGPMD 242 (511)
Q Consensus 199 ~~~~~--~~~~-fD~I~~~~~~~-----~~~~~~--~~~LkpgG~l~~~~~~~~ 242 (511)
.+... ..++ ||+|+++.+++ .+.+.+ .++|||||.+++......
T Consensus 114 ~~~~~~~~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 114 LDFLKQPQNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp HHHTTSCCSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred HHHHHhhccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 65322 2468 99999998854 223455 456999999999876544
No 74
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.44 E-value=6.3e-13 Score=126.81 Aligned_cols=112 Identities=18% Similarity=0.215 Sum_probs=89.6
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhcc-CCCcCCCCCeEEEEccCC
Q psy7829 121 ADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKG-NKDLLDSGRVRIVEADAR 199 (511)
Q Consensus 121 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-~~~~~~~~~v~~~~~d~~ 199 (511)
..+++.+. +.++.+|||+|||+|.++..+++...+..+|+++|+++.+++.|++++..+ + .++++++++|+.
T Consensus 100 ~~~~~~~~--~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g-----~~~v~~~~~d~~ 172 (275)
T 1yb2_A 100 SYIIMRCG--LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD-----IGNVRTSRSDIA 172 (275)
T ss_dssp ------CC--CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC-----CTTEEEECSCTT
T ss_pred HHHHHHcC--CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC-----CCcEEEEECchh
Confidence 34445444 678899999999999999999998657789999999999999999999874 3 458999999998
Q ss_pred CCCCCCCCccEEEecCCCC-chHHHHHhhcccCcEEEEEEcc
Q psy7829 200 EGYLPEAPYDVIYYGGCVS-EVPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 200 ~~~~~~~~fD~I~~~~~~~-~~~~~~~~~LkpgG~l~~~~~~ 240 (511)
+.+ +.++||+|+++.+-. .+++++.+.|||||++++....
T Consensus 173 ~~~-~~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 173 DFI-SDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp TCC-CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred ccC-cCCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 743 347899999976543 4678999999999999997653
No 75
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.43 E-value=6.3e-13 Score=131.93 Aligned_cols=113 Identities=17% Similarity=0.200 Sum_probs=90.5
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCC
Q psy7829 122 DAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREG 201 (511)
Q Consensus 122 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 201 (511)
.+++.+. ..++.+|||+|||+|.++..+++.. |..+|+++|+|+.+++.|++++..++.. ...+++|+.+|+.+.
T Consensus 213 ~ll~~l~--~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~--~~~~v~~~~~D~~~~ 287 (375)
T 4dcm_A 213 FFMQHLP--ENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPE--ALDRCEFMINNALSG 287 (375)
T ss_dssp HHHHTCC--CSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGG--GGGGEEEEECSTTTT
T ss_pred HHHHhCc--ccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCC--cCceEEEEechhhcc
Confidence 3455443 4456899999999999999999986 7789999999999999999999886520 112689999999875
Q ss_pred CCCCCCccEEEecCCCCc-----------hHHHHHhhcccCcEEEEEEcc
Q psy7829 202 YLPEAPYDVIYYGGCVSE-----------VPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 202 ~~~~~~fD~I~~~~~~~~-----------~~~~~~~~LkpgG~l~~~~~~ 240 (511)
+ +.++||+|+++.+++. +.+++.+.|||||.+++....
T Consensus 288 ~-~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 288 V-EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp C-CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred C-CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 4 3478999999988752 357889999999999997653
No 76
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.43 E-value=5.2e-13 Score=123.50 Aligned_cols=92 Identities=20% Similarity=0.282 Sum_probs=80.0
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC-CC-CCCc
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY-LP-EAPY 208 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~-~~~f 208 (511)
+.++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.++++. ++++++++|+.+.. .. .++|
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~~~f 112 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARANA----------PHADVYEWNGKGELPAGLGAPF 112 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHC----------TTSEEEECCSCSSCCTTCCCCE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhC----------CCceEEEcchhhccCCcCCCCE
Confidence 578899999999999999999987 348999999999999999882 26899999995433 33 5789
Q ss_pred cEEEecCCCCchHHHHHhhcccCcEEE
Q psy7829 209 DVIYYGGCVSEVPSRVLNQLKKGGRIL 235 (511)
Q Consensus 209 D~I~~~~~~~~~~~~~~~~LkpgG~l~ 235 (511)
|+|+++.....+++++.+.|||||.++
T Consensus 113 D~v~~~~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 113 GLIVSRRGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EEEEEESCCSGGGGGHHHHEEEEEEEE
T ss_pred EEEEeCCCHHHHHHHHHHHcCCCcEEE
Confidence 999999888888899999999999998
No 77
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.43 E-value=8.5e-13 Score=118.41 Aligned_cols=117 Identities=24% Similarity=0.269 Sum_probs=94.4
Q ss_pred cchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEE
Q psy7829 114 MNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRI 193 (511)
Q Consensus 114 ~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 193 (511)
.+.+.+...+++.+. ..++.+|||+|||+|.++..+++.. .+|+++|+++.+++.+++++...+ ..+++++
T Consensus 16 ~~~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~----~~~~~~~ 86 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAE--PGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHG----LGDNVTL 86 (192)
T ss_dssp CCCHHHHHHHHHHHC--CCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTT----CCTTEEE
T ss_pred CChHHHHHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcC----CCcceEE
Confidence 345556666777775 7789999999999999999999875 589999999999999999998764 2368999
Q ss_pred EEccCCCCCCCCCCccEEEecCCCCch---HHHHHhhcccCcEEEEEEc
Q psy7829 194 VEADAREGYLPEAPYDVIYYGGCVSEV---PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 194 ~~~d~~~~~~~~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~l~~~~~ 239 (511)
+++|+.+.....++||+|+++.+++++ .+.+.+.|+|||.+++...
T Consensus 87 ~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 87 MEGDAPEALCKIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp EESCHHHHHTTSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EecCHHHhcccCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999986533222589999999876554 4788999999999998654
No 78
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.43 E-value=3.1e-13 Score=131.03 Aligned_cols=107 Identities=20% Similarity=0.241 Sum_probs=89.1
Q ss_pred hhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCC
Q psy7829 128 KLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAP 207 (511)
Q Consensus 128 ~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 207 (511)
...+.++.+|||+|||+|..+..++....+..+|+++|+|+.+++.|++++...+ ..++++++++|+.+...+ ++
T Consensus 113 ~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~-~~ 187 (305)
T 3ocj_A 113 QRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA----LAGQITLHRQDAWKLDTR-EG 187 (305)
T ss_dssp HHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST----TGGGEEEEECCGGGCCCC-SC
T ss_pred HhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC----CCCceEEEECchhcCCcc-CC
Confidence 3347889999999999999999986434477899999999999999999998764 244699999999875545 89
Q ss_pred ccEEEecCCCCch---------HHHHHhhcccCcEEEEEEc
Q psy7829 208 YDVIYYGGCVSEV---------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 208 fD~I~~~~~~~~~---------~~~~~~~LkpgG~l~~~~~ 239 (511)
||+|+++.+++++ .+++.+.|||||++++...
T Consensus 188 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 188 YDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp EEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred eEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 9999998877653 4788999999999998543
No 79
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.43 E-value=4.8e-13 Score=126.38 Aligned_cols=106 Identities=20% Similarity=0.252 Sum_probs=86.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhc---cCCCcCCCCCeEEEEccCCCCC-----
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISK---GNKDLLDSGRVRIVEADAREGY----- 202 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~---~~~~~~~~~~v~~~~~d~~~~~----- 202 (511)
..++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|++++.. ++ ..++++++++|+.+..
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~----l~~~v~~~~~D~~~~~~~~~~ 108 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAA----FSARIEVLEADVTLRAKARVE 108 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTT----TGGGEEEEECCTTCCHHHHHH
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCC----CcceEEEEeCCHHHHhhhhhh
Confidence 4577899999999999999999986 678999999999999999999887 54 2347999999998641
Q ss_pred --CCCCCccEEEecCCCCc------------------------hHHHHHhhcccCcEEEEEEccC
Q psy7829 203 --LPEAPYDVIYYGGCVSE------------------------VPSRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 203 --~~~~~fD~I~~~~~~~~------------------------~~~~~~~~LkpgG~l~~~~~~~ 241 (511)
...++||+|++++++.. +.+.+.++|||||++++.....
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 173 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ 173 (260)
T ss_dssp TTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred hccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH
Confidence 23478999999976632 2467789999999999976543
No 80
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.43 E-value=3.6e-14 Score=130.02 Aligned_cols=122 Identities=21% Similarity=0.305 Sum_probs=74.0
Q ss_pred CCcccchhHH---HHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcC
Q psy7829 110 YAGVMNAPNQ---IADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLL 186 (511)
Q Consensus 110 ~~~~~~~p~~---~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~ 186 (511)
.+..+++|.. ...+++.+. ...++.+|||+|||+|.++..+++.. +..+++++|+++.+++.|++++..++
T Consensus 5 ~~~~~p~~~~~~~~~~~~~~l~-~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~---- 78 (215)
T 4dzr_A 5 PDCLIPRPDTEVLVEEAIRFLK-RMPSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFG---- 78 (215)
T ss_dssp GGGGSCCHHHHHHHHHHHHHHT-TCCTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC-------------------
T ss_pred CCccCCCccHHHHHHHHHHHhh-hcCCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhC----
Confidence 3445555543 333444443 12678899999999999999999986 67899999999999999999988753
Q ss_pred CCCCeEEEEccCCCCCCC----CCCccEEEecCCCCc--------------------------------hHHHHHhhccc
Q psy7829 187 DSGRVRIVEADAREGYLP----EAPYDVIYYGGCVSE--------------------------------VPSRVLNQLKK 230 (511)
Q Consensus 187 ~~~~v~~~~~d~~~~~~~----~~~fD~I~~~~~~~~--------------------------------~~~~~~~~Lkp 230 (511)
. +++++++|+.+.+.. .++||+|+++.++.. +.+++.+.|||
T Consensus 79 -~-~~~~~~~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp 156 (215)
T 4dzr_A 79 -A-VVDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLAR 156 (215)
T ss_dssp ------CCHHHHHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCS
T ss_pred -C-ceEEEEcchHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcC
Confidence 2 789999998762221 278999999877622 22456689999
Q ss_pred CcE-EEEEEc
Q psy7829 231 GGR-ILAPIG 239 (511)
Q Consensus 231 gG~-l~~~~~ 239 (511)
||+ +++.+.
T Consensus 157 gG~l~~~~~~ 166 (215)
T 4dzr_A 157 GRAGVFLEVG 166 (215)
T ss_dssp SSEEEEEECT
T ss_pred CCeEEEEEEC
Confidence 999 665443
No 81
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.43 E-value=7.1e-13 Score=123.89 Aligned_cols=106 Identities=18% Similarity=0.212 Sum_probs=87.4
Q ss_pred HHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC
Q psy7829 124 AENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL 203 (511)
Q Consensus 124 ~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 203 (511)
++.+...++++.+|||+|||+|.++..+++. ..+|+++|+++.+++.++++.. ..+++++++|+.....
T Consensus 44 ~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~~~ 112 (242)
T 3l8d_A 44 IPFFEQYVKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERGE--------GPDLSFIKGDLSSLPF 112 (242)
T ss_dssp HHHHHHHSCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTTC--------BTTEEEEECBTTBCSS
T ss_pred HHHHHHHcCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhcc--------cCCceEEEcchhcCCC
Confidence 3444444678899999999999999999987 3479999999999999988742 3479999999987555
Q ss_pred CCCCccEEEecCCCCch------HHHHHhhcccCcEEEEEEcc
Q psy7829 204 PEAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 204 ~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~~~ 240 (511)
+.++||+|++..+++++ ++++.+.|||||.+++....
T Consensus 113 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 113 ENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp CTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcC
Confidence 56899999999988754 47899999999999997643
No 82
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.43 E-value=8e-13 Score=134.93 Aligned_cols=177 Identities=15% Similarity=0.155 Sum_probs=117.9
Q ss_pred cCCCCCCCCcccCCCccHHHHHHHHHHcCCCCCH-HH-HHHHHhCCCC-----CccCCCCCCCcccccCCCcccchhHHH
Q psy7829 48 VIPPPDNLNHFKNEGTCQTDLVNHLRDIGKIRTE-RV-AQAFYKVDRG-----NFANEEPYQDVSASLGYAGVMNAPNQI 120 (511)
Q Consensus 48 ~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~-~~a~~~~~r~-----~~~~~~~y~~~~~~~~~~~~~~~p~~~ 120 (511)
...++...+++|+...+..++.+.|...|+...+ .+ ..++. ++.. .+.....|..+.+.+ +....
T Consensus 33 ~~~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~~~~-------Qd~~s 104 (479)
T 2frx_A 33 CQRPLRRSIRVNTLKISVADFLQLTAPYGWTLTPIPWCEEGFW-IERDNEDALPLGSTAEHLSGLFYI-------QEASS 104 (479)
T ss_dssp HTSCCCCCEEECTTTCCHHHHHHHHGGGCCCCCEETTEEEEEC----------CGGGSHHHHTTSEEE-------CCHHH
T ss_pred cCCCCCEEEEEeCCCCCHHHHHHHHHHcCCceeecCCCCceEE-EecCcccccCcccChHHhCcEEEE-------ECHHH
Confidence 3445667889999999999999999877752111 00 00000 0000 000011122211111 11111
Q ss_pred HHHHHHHhhcCC--CCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccC
Q psy7829 121 ADAAENLKLHLV--DGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADA 198 (511)
Q Consensus 121 ~~~~~~l~~~~~--~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 198 (511)
..+...+. .. ++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.+++|++++| ..++.++++|+
T Consensus 105 ~l~~~~L~--~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g-----~~nv~~~~~D~ 177 (479)
T 2frx_A 105 MLPVAALF--ADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG-----ISNVALTHFDG 177 (479)
T ss_dssp HHHHHHHT--TTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT-----CCSEEEECCCS
T ss_pred HHHHHHhC--cccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCcEEEEeCCH
Confidence 12234444 45 89999999999999999999998667899999999999999999999864 55899999998
Q ss_pred CCCCC-CCCCccEEEecCCCC----------------------------chHHHHHhhcccCcEEEEEEc
Q psy7829 199 REGYL-PEAPYDVIYYGGCVS----------------------------EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 199 ~~~~~-~~~~fD~I~~~~~~~----------------------------~~~~~~~~~LkpgG~l~~~~~ 239 (511)
..... ..++||+|++++++. .++.++.++|||||+|+++..
T Consensus 178 ~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 178 RVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp TTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred HHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 75322 236899999987762 134567899999999998743
No 83
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.42 E-value=1.1e-12 Score=131.20 Aligned_cols=122 Identities=19% Similarity=0.229 Sum_probs=94.1
Q ss_pred cCCCcccchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHH-------HHHHhc
Q psy7829 108 LGYAGVMNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEAS-------LRNISK 180 (511)
Q Consensus 108 ~~~~~~~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a-------~~~~~~ 180 (511)
..++..+ |.+.+.+++.+. +.++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.| ++++..
T Consensus 221 ~~yGet~--p~~v~~ml~~l~--l~~g~~VLDLGCGsG~la~~LA~~~-g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~ 295 (433)
T 1u2z_A 221 YVYGELL--PNFLSDVYQQCQ--LKKGDTFMDLGSGVGNCVVQAALEC-GCALSFGCEIMDDASDLTILQYEELKKRCKL 295 (433)
T ss_dssp GCCCCBC--HHHHHHHHHHTT--CCTTCEEEEESCTTSHHHHHHHHHH-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccc--HHHHHHHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHH
Confidence 3444444 778888888876 7889999999999999999999987 446899999999999998 888877
Q ss_pred cCCCcCCCCCeEEEEccCCCC-CC---CCCCccEEEecCCCC-----chHHHHHhhcccCcEEEEE
Q psy7829 181 GNKDLLDSGRVRIVEADAREG-YL---PEAPYDVIYYGGCVS-----EVPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 181 ~~~~~~~~~~v~~~~~d~~~~-~~---~~~~fD~I~~~~~~~-----~~~~~~~~~LkpgG~l~~~ 237 (511)
.| +...+++++++|.... +. ..++||+|+++..+. ..+.++.++|||||++++.
T Consensus 296 ~G---l~~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 296 YG---MRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp TT---BCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred cC---CCCCceEEEEcCccccccccccccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEe
Confidence 54 1146899999875432 11 136899999875542 1236899999999999985
No 84
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.42 E-value=3.2e-13 Score=126.55 Aligned_cols=103 Identities=20% Similarity=0.210 Sum_probs=86.2
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC---CCCCc
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL---PEAPY 208 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~f 208 (511)
.++.+|||||||+|..++.++... +..+|+++|+++.+++.|++++..++ ..|++++++|+.+... ..++|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~-----l~~v~~~~~d~~~~~~~~~~~~~f 152 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLG-----LKGARALWGRAEVLAREAGHREAY 152 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHT-----CSSEEEEECCHHHHTTSTTTTTCE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhC-----CCceEEEECcHHHhhcccccCCCc
Confidence 467899999999999999999986 77899999999999999999998864 4579999999875332 23789
Q ss_pred cEEEecCCC--CchHHHHHhhcccCcEEEEEEcc
Q psy7829 209 DVIYYGGCV--SEVPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 209 D~I~~~~~~--~~~~~~~~~~LkpgG~l~~~~~~ 240 (511)
|+|++.... ..+.+.+.++|||||++++..+.
T Consensus 153 D~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~g~ 186 (249)
T 3g89_A 153 ARAVARAVAPLCVLSELLLPFLEVGGAAVAMKGP 186 (249)
T ss_dssp EEEEEESSCCHHHHHHHHGGGEEEEEEEEEEECS
T ss_pred eEEEECCcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 999998654 34557889999999999986553
No 85
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.42 E-value=7.7e-13 Score=125.24 Aligned_cols=110 Identities=21% Similarity=0.234 Sum_probs=88.9
Q ss_pred HHHHHHHHH---hhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEE
Q psy7829 119 QIADAAENL---KLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVE 195 (511)
Q Consensus 119 ~~~~~~~~l---~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 195 (511)
....+++.+ ...+.++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.+++++.. ..+++++++
T Consensus 22 ~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~ 92 (263)
T 2yqz_A 22 VAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKIAG------VDRKVQVVQ 92 (263)
T ss_dssp HHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHTTT------SCTTEEEEE
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHhhc------cCCceEEEE
Confidence 344455555 224678899999999999999999886 35799999999999999998722 356899999
Q ss_pred ccCCCCCCCCCCccEEEecCCCCch------HHHHHhhcccCcEEEEE
Q psy7829 196 ADAREGYLPEAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 196 ~d~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~ 237 (511)
+|+.....+.++||+|++..+++++ .+++.+.|||||.+++.
T Consensus 93 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 93 ADARAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp SCTTSCCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccCCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 9997654456789999999887665 37889999999999985
No 86
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.42 E-value=4.6e-13 Score=122.90 Aligned_cols=98 Identities=13% Similarity=0.173 Sum_probs=83.3
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
..++.+|||+|||+|.++..+++.. .+|+++|+++.+++.|++++... ++++++++|+.+.. ..++||+
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~~~-~~~~fD~ 117 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRW-------SHISWAATDILQFS-TAELFDL 117 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTC-------SSEEEEECCTTTCC-CSCCEEE
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccC-------CCeEEEEcchhhCC-CCCCccE
Confidence 4567899999999999999999875 37999999999999999997653 38999999998755 4588999
Q ss_pred EEecCCCCch---------HHHHHhhcccCcEEEEEEc
Q psy7829 211 IYYGGCVSEV---------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 211 I~~~~~~~~~---------~~~~~~~LkpgG~l~~~~~ 239 (511)
|+++.+++++ .+++.+.|||||.+++...
T Consensus 118 v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 118 IVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp EEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 9999877654 3578899999999998654
No 87
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.42 E-value=5.9e-13 Score=123.60 Aligned_cols=108 Identities=11% Similarity=0.121 Sum_probs=83.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCC-CcCCCCCeEEEEccCCCCC---CCCC
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNK-DLLDSGRVRIVEADAREGY---LPEA 206 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~-~~~~~~~v~~~~~d~~~~~---~~~~ 206 (511)
..++.+|||||||+|.++..+|+.. +...|+|+|+|+.+++.|++++..... ......|++++++|+...+ .+.+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCc
Confidence 3467789999999999999999986 778999999999999999988753100 0003568999999997622 3457
Q ss_pred CccEEEecCCCCc--------------hHHHHHhhcccCcEEEEEEc
Q psy7829 207 PYDVIYYGGCVSE--------------VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 207 ~fD~I~~~~~~~~--------------~~~~~~~~LkpgG~l~~~~~ 239 (511)
+||.|++..+.++ +++++.++|||||.|++...
T Consensus 123 ~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 123 QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 8999998765432 56889999999999998654
No 88
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.42 E-value=2.3e-13 Score=127.03 Aligned_cols=119 Identities=16% Similarity=0.237 Sum_probs=94.0
Q ss_pred cchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEE
Q psy7829 114 MNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRI 193 (511)
Q Consensus 114 ~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 193 (511)
+..|.....+...+. ..++.+|||+|||+|+.+..+++.+++.++|+++|+++.+++.|++++...+ ...++++
T Consensus 43 ~~~~~~~~~l~~l~~--~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g----~~~~v~~ 116 (239)
T 2hnk_A 43 QISPEEGQFLNILTK--ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG----LENKIFL 116 (239)
T ss_dssp SCCHHHHHHHHHHHH--HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT----CGGGEEE
T ss_pred ccCHHHHHHHHHHHH--hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCCEEE
Confidence 445666666655554 5578899999999999999999997547899999999999999999998764 2345999
Q ss_pred EEccCCCCCC---------------C-C-CCccEEEecCCCCch---HHHHHhhcccCcEEEEEE
Q psy7829 194 VEADAREGYL---------------P-E-APYDVIYYGGCVSEV---PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 194 ~~~d~~~~~~---------------~-~-~~fD~I~~~~~~~~~---~~~~~~~LkpgG~l~~~~ 238 (511)
+.+|+.+..+ + . ++||+|+++...... .+.+.+.|||||++++..
T Consensus 117 ~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 117 KLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp EESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 9999754211 1 2 689999998776644 488999999999999853
No 89
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.42 E-value=2.1e-13 Score=126.14 Aligned_cols=103 Identities=20% Similarity=0.298 Sum_probs=84.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC---C---
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL---P--- 204 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---~--- 204 (511)
..++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.|+++++..+ ..++++++++|+.+..+ .
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~~ 137 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG----LSDKIGLRLSPAKDTLAELIHAGQ 137 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEESCHHHHHHHHHTTTC
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC----CCCceEEEeCCHHHHHHHhhhccC
Confidence 4467899999999999999999987557899999999999999999998865 34569999999854221 1
Q ss_pred CCCccEEEecCCCCc---hHHHHHhhcccCcEEEEE
Q psy7829 205 EAPYDVIYYGGCVSE---VPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 205 ~~~fD~I~~~~~~~~---~~~~~~~~LkpgG~l~~~ 237 (511)
.++||+|+++..... +.+.+.+.|||||.+++.
T Consensus 138 ~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 138 AWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp TTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 168999999877543 347889999999999873
No 90
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.42 E-value=1.1e-12 Score=125.04 Aligned_cols=115 Identities=17% Similarity=0.241 Sum_probs=89.5
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHH------HHHHHHHHHhccCCCcCCCCCeE
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPE------LIEASLRNISKGNKDLLDSGRVR 192 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~------~~~~a~~~~~~~~~~~~~~~~v~ 192 (511)
....+++.+. +.++.+|||||||+|.++..+++..++..+|+++|+|+. +++.|++++...+ ..++++
T Consensus 31 ~~~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~----~~~~v~ 104 (275)
T 3bkx_A 31 HRLAIAEAWQ--VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP----LGDRLT 104 (275)
T ss_dssp HHHHHHHHHT--CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST----TGGGEE
T ss_pred HHHHHHHHcC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC----CCCceE
Confidence 3444555554 678999999999999999999999767789999999997 9999999988754 235899
Q ss_pred EEEcc-CC--CCCCCCCCccEEEecCCCCchH------HHHHhhcccCcEEEEEEc
Q psy7829 193 IVEAD-AR--EGYLPEAPYDVIYYGGCVSEVP------SRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 193 ~~~~d-~~--~~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~l~~~~~ 239 (511)
++++| .. ....+.++||+|++..+++++. +.+..+++|||++++...
T Consensus 105 ~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 105 VHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp EECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred EEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 99998 32 2222357899999998886653 455666677999998643
No 91
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.42 E-value=8.5e-13 Score=125.96 Aligned_cols=102 Identities=25% Similarity=0.174 Sum_probs=87.3
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
++++.+|||+|||+|.++..+++.. .. +|+++|+|+.+++.|++|++.++ ..++++++++|+.+... .++||+
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~-~~-~V~~vD~s~~~~~~a~~n~~~n~----~~~~v~~~~~D~~~~~~-~~~fD~ 195 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-KA-KVIAIEKDPYTFKFLVENIHLNK----VEDRMSAYNMDNRDFPG-ENIADR 195 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHT-CC-EEEEECCCHHHHHHHHHHHHHTT----CTTTEEEECSCTTTCCC-CSCEEE
T ss_pred CCCCCEEEEecccCCHHHHHHHHhC-CC-EEEEEECCHHHHHHHHHHHHHcC----CCceEEEEECCHHHhcc-cCCccE
Confidence 5679999999999999999999985 33 79999999999999999999875 23459999999987554 578999
Q ss_pred EEecCCCC--chHHHHHhhcccCcEEEEEEc
Q psy7829 211 IYYGGCVS--EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 211 I~~~~~~~--~~~~~~~~~LkpgG~l~~~~~ 239 (511)
|+++.+.. .+...+.+.|||||.+++...
T Consensus 196 Vi~~~p~~~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 196 ILMGYVVRTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp EEECCCSSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCchhHHHHHHHHHHHCCCCeEEEEEEe
Confidence 99987764 466889999999999998544
No 92
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.42 E-value=7.3e-13 Score=129.55 Aligned_cols=115 Identities=20% Similarity=0.190 Sum_probs=89.6
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHh-------ccCCCcCCCC
Q psy7829 117 PNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNIS-------KGNKDLLDSG 189 (511)
Q Consensus 117 p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~-------~~~~~~~~~~ 189 (511)
+.....+++.+. +.++.+|||||||+|.+++.++... +..+|+|||+++.+++.|+++.+ .+| +...
T Consensus 159 ~~~i~~il~~l~--l~~gd~VLDLGCGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~G---l~~~ 232 (438)
T 3uwp_A 159 FDLVAQMIDEIK--MTDDDLFVDLGSGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYG---KKHA 232 (438)
T ss_dssp HHHHHHHHHHHC--CCTTCEEEEESCTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHT---BCCC
T ss_pred HHHHHHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhC---CCCC
Confidence 456677777776 8899999999999999999999876 34579999999999999988653 222 1236
Q ss_pred CeEEEEccCCCCCCCC--CCccEEEecCCCCc-----hHHHHHhhcccCcEEEEE
Q psy7829 190 RVRIVEADAREGYLPE--APYDVIYYGGCVSE-----VPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 190 ~v~~~~~d~~~~~~~~--~~fD~I~~~~~~~~-----~~~~~~~~LkpgG~l~~~ 237 (511)
+|+|+++|+.+..... ..||+|+++..+.. .+.++++.|||||+|++.
T Consensus 233 rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 233 EYTLERGDFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp EEEEEECCTTSHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEES
T ss_pred CeEEEECcccCCccccccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEe
Confidence 8999999998643221 46999999877532 236788999999999874
No 93
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.42 E-value=3.3e-14 Score=143.60 Aligned_cols=169 Identities=13% Similarity=0.072 Sum_probs=112.3
Q ss_pred CCCCCcccCCCccHHHHHHHHHHcCCCCCH-HH-HHHHHhCCCCCccCCCCCCCcccccCCCcccchhHHHHHHHHHHhh
Q psy7829 52 PDNLNHFKNEGTCQTDLVNHLRDIGKIRTE-RV-AQAFYKVDRGNFANEEPYQDVSASLGYAGVMNAPNQIADAAENLKL 129 (511)
Q Consensus 52 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~-~~a~~~~~r~~~~~~~~y~~~~~~~~~~~~~~~p~~~~~~~~~l~~ 129 (511)
+...+++|+...+..++.+.+ ++...+ .+ ..++....+..+.....|.++.+.++...+ ..+...+.
T Consensus 30 ~~~~lRvN~lk~~~~~~~~~l---~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~G~~~vQd~ss-------~l~a~~L~- 98 (464)
T 3m6w_A 30 RTYGLRVNTLKLPPEAFQRIS---PWPLRPIPWCQEGFYYPEEARPGPHPFFYAGLYYIQEPSA-------QAVGVLLD- 98 (464)
T ss_dssp CCCEEEECTTTCCHHHHHHHC---SSCCEEETTEEEEEECCTTCCCSSSHHHHTTSEEECCTTT-------HHHHHHHC-
T ss_pred CCeEEEEcCCCCCHHHHHHHc---CCCceecCCCCceEEECCCCCcccChHHhCCeEEEECHHH-------HHHHHhcC-
Confidence 566788899999988887766 221000 00 000000000011111123333333332221 12233444
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC-CCCCc
Q psy7829 130 HLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL-PEAPY 208 (511)
Q Consensus 130 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~f 208 (511)
..++.+|||+|||+|..+..+++.++..++|+++|+++.+++.+++|++++| .. +.++++|+..... ..++|
T Consensus 99 -~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G-----~~-v~~~~~Da~~l~~~~~~~F 171 (464)
T 3m6w_A 99 -PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG-----AP-LAVTQAPPRALAEAFGTYF 171 (464)
T ss_dssp -CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC-----CC-CEEECSCHHHHHHHHCSCE
T ss_pred -cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-----Ce-EEEEECCHHHhhhhccccC
Confidence 6789999999999999999999998666899999999999999999999875 44 8999999765321 24789
Q ss_pred cEEEecCCCC----------------------------chHHHHHhhcccCcEEEEEE
Q psy7829 209 DVIYYGGCVS----------------------------EVPSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 209 D~I~~~~~~~----------------------------~~~~~~~~~LkpgG~l~~~~ 238 (511)
|+|++++++. .+++.+.+.|||||+|++++
T Consensus 172 D~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 172 HRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp EEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999988871 23467888999999999864
No 94
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.42 E-value=3.7e-12 Score=119.47 Aligned_cols=118 Identities=21% Similarity=0.311 Sum_probs=96.7
Q ss_pred cchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEE
Q psy7829 114 MNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRI 193 (511)
Q Consensus 114 ~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 193 (511)
+..|.....++..+. +.++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|+++....+ ..+++++
T Consensus 74 ~~~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~ 144 (248)
T 2yvl_A 74 IIYPKDSFYIALKLN--LNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFN----LGKNVKF 144 (248)
T ss_dssp CCCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTT----CCTTEEE
T ss_pred cccchhHHHHHHhcC--CCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcC----CCCcEEE
Confidence 334555666666665 778999999999999999999998 4589999999999999999988754 2368999
Q ss_pred EEccCCCCCCCCCCccEEEecCCCC-chHHHHHhhcccCcEEEEEEcc
Q psy7829 194 VEADAREGYLPEAPYDVIYYGGCVS-EVPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 194 ~~~d~~~~~~~~~~fD~I~~~~~~~-~~~~~~~~~LkpgG~l~~~~~~ 240 (511)
+.+|+.+.....+.||+|+++.+-. .+.+++.+.|+|||.+++....
T Consensus 145 ~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 145 FNVDFKDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp ECSCTTTSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred EEcChhhcccCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9999987552446899999987654 6778999999999999997763
No 95
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.42 E-value=2e-13 Score=139.29 Aligned_cols=176 Identities=16% Similarity=0.136 Sum_probs=117.5
Q ss_pred CCCCCCCcccCCCccHHHHHHHHHHcCCCCCH-HH-HHHHHhCCCCCccCCCCCCCcccccCCCcccchhHHHHHHHHHH
Q psy7829 50 PPPDNLNHFKNEGTCQTDLVNHLRDIGKIRTE-RV-AQAFYKVDRGNFANEEPYQDVSASLGYAGVMNAPNQIADAAENL 127 (511)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~-~~a~~~~~r~~~~~~~~y~~~~~~~~~~~~~~~p~~~~~~~~~l 127 (511)
.+++..+++|+...+..++.+.|...|+...+ .+ ..++...++..+.....|.++.+.+ +......+...+
T Consensus 183 ~~~~~~~Rvn~~k~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-------qd~~s~l~~~~l 255 (450)
T 2yxl_A 183 RHEWISIRVNTLKANVEEVIGELEEDGVEVVRSERVPTILKIKGPYNFDTSSAFNEGKIIV-------QEEASAVASIVL 255 (450)
T ss_dssp CCCEEEEEECTTTCCHHHHHHHHHHTTCCEEECSSCTTEEEEESCCCTTSCHHHHTTSEEE-------CCHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHhCCccceecCccCceEEeCCCCCcccCchhhCceEEe-------cCchhHHHHHhc
Confidence 45566788898888899999999887752111 00 0000000000000111122222211 111222233444
Q ss_pred hhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC--CCC
Q psy7829 128 KLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY--LPE 205 (511)
Q Consensus 128 ~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~ 205 (511)
. ..++.+|||+|||+|..+..+++.++..++|+++|+++.+++.+++++++.| .++++++++|+.... ...
T Consensus 256 ~--~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g-----~~~v~~~~~D~~~~~~~~~~ 328 (450)
T 2yxl_A 256 D--PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG-----IKIVKPLVKDARKAPEIIGE 328 (450)
T ss_dssp C--CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT-----CCSEEEECSCTTCCSSSSCS
T ss_pred C--CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC-----CCcEEEEEcChhhcchhhcc
Confidence 4 7789999999999999999999987444899999999999999999999864 568999999987643 223
Q ss_pred CCccEEEecCCCC----------------------------chHHHHHhhcccCcEEEEEEc
Q psy7829 206 APYDVIYYGGCVS----------------------------EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 206 ~~fD~I~~~~~~~----------------------------~~~~~~~~~LkpgG~l~~~~~ 239 (511)
++||+|+++.++. .++..+.+.|||||++++...
T Consensus 329 ~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 329 EVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp SCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred CCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 6799999987762 235678899999999998643
No 96
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.42 E-value=1.2e-12 Score=120.34 Aligned_cols=104 Identities=22% Similarity=0.235 Sum_probs=86.1
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCC
Q psy7829 121 ADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADARE 200 (511)
Q Consensus 121 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 200 (511)
..+++.+. ..++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++++. .+++++++|+.+
T Consensus 35 ~~~l~~~~--~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~d~~~ 100 (220)
T 3hnr_A 35 EDILEDVV--NKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP---------KEFSITEGDFLS 100 (220)
T ss_dssp HHHHHHHH--HTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC---------TTCCEESCCSSS
T ss_pred HHHHHHhh--ccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC---------CceEEEeCChhh
Confidence 34555554 457889999999999999999987 3479999999999999998854 368999999987
Q ss_pred CCCCCCCccEEEecCCCCc--------hHHHHHhhcccCcEEEEEEc
Q psy7829 201 GYLPEAPYDVIYYGGCVSE--------VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 201 ~~~~~~~fD~I~~~~~~~~--------~~~~~~~~LkpgG~l~~~~~ 239 (511)
.... ++||+|++..++++ +++++.+.|||||.+++...
T Consensus 101 ~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 101 FEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp CCCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred cCCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 5545 89999999988865 44788999999999998643
No 97
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.41 E-value=7.9e-13 Score=120.29 Aligned_cols=110 Identities=15% Similarity=0.188 Sum_probs=89.8
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccC
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADA 198 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 198 (511)
....+++.+...+.++.+|||+|||+|.++..+++. +..+|+++|+++.+++.|++++..++ ..+++++++|+
T Consensus 46 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d~ 118 (205)
T 3grz_A 46 TTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNG-----IYDIALQKTSL 118 (205)
T ss_dssp HHHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTT-----CCCCEEEESST
T ss_pred cHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcC-----CCceEEEeccc
Confidence 344455666555678899999999999999998875 45689999999999999999998764 44599999998
Q ss_pred CCCCCCCCCccEEEecCCCCch---HHHHHhhcccCcEEEEE
Q psy7829 199 REGYLPEAPYDVIYYGGCVSEV---PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 199 ~~~~~~~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~l~~~ 237 (511)
.... .++||+|+++.+++++ .+++.+.|||||.+++.
T Consensus 119 ~~~~--~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 158 (205)
T 3grz_A 119 LADV--DGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFS 158 (205)
T ss_dssp TTTC--CSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEE
T ss_pred cccC--CCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 7643 3789999999877654 46778999999999985
No 98
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.41 E-value=2.1e-12 Score=115.97 Aligned_cols=112 Identities=21% Similarity=0.228 Sum_probs=91.8
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCC--eEEEEc
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGR--VRIVEA 196 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~--v~~~~~ 196 (511)
....+++.+. ..++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++++...+ ..+ ++++.+
T Consensus 40 ~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~ 109 (194)
T 1dus_A 40 GTKILVENVV--VDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNN-----LDNYDIRVVHS 109 (194)
T ss_dssp HHHHHHHHCC--CCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTT-----CTTSCEEEEEC
T ss_pred HHHHHHHHcc--cCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcC-----CCccceEEEEC
Confidence 4555666664 568889999999999999999887 4589999999999999999998753 344 999999
Q ss_pred cCCCCCCCCCCccEEEecCCCCc-------hHHHHHhhcccCcEEEEEEccC
Q psy7829 197 DAREGYLPEAPYDVIYYGGCVSE-------VPSRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 197 d~~~~~~~~~~fD~I~~~~~~~~-------~~~~~~~~LkpgG~l~~~~~~~ 241 (511)
|+.+... .++||+|+++.++++ +.+++.+.|+|||.+++.....
T Consensus 110 d~~~~~~-~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 110 DLYENVK-DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp STTTTCT-TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred chhcccc-cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 9987443 478999999988764 3477889999999999976643
No 99
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.41 E-value=9.2e-13 Score=120.03 Aligned_cols=116 Identities=15% Similarity=0.236 Sum_probs=90.7
Q ss_pred HHHHHHHHHhhc-CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEcc
Q psy7829 119 QIADAAENLKLH-LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEAD 197 (511)
Q Consensus 119 ~~~~~~~~l~~~-~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 197 (511)
+...+++.+... ..++.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++++...+ .++++++++|
T Consensus 50 ~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d 123 (207)
T 1jsx_A 50 LVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELK-----LENIEPVQSR 123 (207)
T ss_dssp HHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTT-----CSSEEEEECC
T ss_pred HHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcC-----CCCeEEEecc
Confidence 344555555411 1247899999999999999999986 67899999999999999999998753 4569999999
Q ss_pred CCCCCCCCCCccEEEecCCC--CchHHHHHhhcccCcEEEEEEccC
Q psy7829 198 AREGYLPEAPYDVIYYGGCV--SEVPSRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 198 ~~~~~~~~~~fD~I~~~~~~--~~~~~~~~~~LkpgG~l~~~~~~~ 241 (511)
+.+.. +.++||+|+++... ..+.+.+.+.|+|||.+++..+..
T Consensus 124 ~~~~~-~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 168 (207)
T 1jsx_A 124 VEEFP-SEPPFDGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQM 168 (207)
T ss_dssp TTTSC-CCSCEEEEECSCSSSHHHHHHHHTTSEEEEEEEEEEESSC
T ss_pred hhhCC-ccCCcCEEEEeccCCHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 98754 34789999986532 234578889999999999976643
No 100
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.41 E-value=7.1e-13 Score=124.29 Aligned_cols=107 Identities=17% Similarity=0.205 Sum_probs=87.4
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccC
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADA 198 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 198 (511)
....+++.+.. ..++.+|||+|||+|.++..+++.. + +|+|+|+|+.+++.|++++.. +++++++|+
T Consensus 29 ~~~~~~~~l~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~gvD~s~~~~~~a~~~~~~---------~v~~~~~d~ 95 (250)
T 2p7i_A 29 MHPFMVRAFTP-FFRPGNLLELGSFKGDFTSRLQEHF-N--DITCVEASEEAISHAQGRLKD---------GITYIHSRF 95 (250)
T ss_dssp HHHHHHHHHGG-GCCSSCEEEESCTTSHHHHHHTTTC-S--CEEEEESCHHHHHHHHHHSCS---------CEEEEESCG
T ss_pred HHHHHHHHHHh-hcCCCcEEEECCCCCHHHHHHHHhC-C--cEEEEeCCHHHHHHHHHhhhC---------CeEEEEccH
Confidence 44556666652 3467899999999999999999874 3 699999999999999988532 699999998
Q ss_pred CCCCCCCCCccEEEecCCCCch------HHHHH-hhcccCcEEEEEEc
Q psy7829 199 REGYLPEAPYDVIYYGGCVSEV------PSRVL-NQLKKGGRILAPIG 239 (511)
Q Consensus 199 ~~~~~~~~~fD~I~~~~~~~~~------~~~~~-~~LkpgG~l~~~~~ 239 (511)
.+.. .+++||+|++..+++++ ++++. +.|||||++++.+.
T Consensus 96 ~~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 96 EDAQ-LPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp GGCC-CSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHcC-cCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 8753 45889999999888765 37889 99999999999764
No 101
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.41 E-value=3.2e-13 Score=117.82 Aligned_cols=99 Identities=12% Similarity=0.067 Sum_probs=81.2
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCcc
Q psy7829 130 HLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYD 209 (511)
Q Consensus 130 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 209 (511)
++.+..+|||+|||+|.++..++... |..+|+++|+|+.|++.+++++..+|. ..++++ .|..... +.++||
T Consensus 46 ~l~~~~~VLDlGCG~GplAl~l~~~~-p~a~~~A~Di~~~~leiar~~~~~~g~----~~~v~~--~d~~~~~-~~~~~D 117 (200)
T 3fzg_A 46 NIKHVSSILDFGCGFNPLALYQWNEN-EKIIYHAYDIDRAEIAFLSSIIGKLKT----TIKYRF--LNKESDV-YKGTYD 117 (200)
T ss_dssp HSCCCSEEEEETCTTHHHHHHHHCSS-CCCEEEEECSCHHHHHHHHHHHHHSCC----SSEEEE--ECCHHHH-TTSEEE
T ss_pred hcCCCCeEEEecCCCCHHHHHHHhcC-CCCEEEEEeCCHHHHHHHHHHHHhcCC----CccEEE--ecccccC-CCCCcC
Confidence 45678899999999999999998875 778999999999999999999998652 225666 6665433 347899
Q ss_pred EEEecCCCCchH------HHHHhhcccCcEEEE
Q psy7829 210 VIYYGGCVSEVP------SRVLNQLKKGGRILA 236 (511)
Q Consensus 210 ~I~~~~~~~~~~------~~~~~~LkpgG~l~~ 236 (511)
+|++...+|.+. .++.+.|||||.++-
T Consensus 118 vVLa~k~LHlL~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 118 VVFLLKMLPVLKQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp EEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEE
T ss_pred hhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEE
Confidence 999999887763 478999999988763
No 102
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.41 E-value=6.1e-13 Score=125.78 Aligned_cols=104 Identities=22% Similarity=0.294 Sum_probs=86.0
Q ss_pred CC-CCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC--CCCC
Q psy7829 131 LV-DGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL--PEAP 207 (511)
Q Consensus 131 ~~-~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~ 207 (511)
.+ ++.+|||+|||+|.++..+++.. + .+|+++|+++.+++.|++++..++ ..++++++++|+.+... ..++
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~-~-~~v~gvDi~~~~~~~a~~n~~~~~----~~~~v~~~~~D~~~~~~~~~~~~ 119 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRT-K-AKIVGVEIQERLADMAKRSVAYNQ----LEDQIEIIEYDLKKITDLIPKER 119 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTC-C-CEEEEECCSHHHHHHHHHHHHHTT----CTTTEEEECSCGGGGGGTSCTTC
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhc-C-CcEEEEECCHHHHHHHHHHHHHCC----CcccEEEEECcHHHhhhhhccCC
Confidence 56 78999999999999999999985 3 389999999999999999999875 34579999999876432 2578
Q ss_pred ccEEEecCCCCc--------------------------hHHHHHhhcccCcEEEEEEcc
Q psy7829 208 YDVIYYGGCVSE--------------------------VPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 208 fD~I~~~~~~~~--------------------------~~~~~~~~LkpgG~l~~~~~~ 240 (511)
||+|++++++.. +.+.+.++|||||++++....
T Consensus 120 fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 178 (259)
T 3lpm_A 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP 178 (259)
T ss_dssp EEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred ccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH
Confidence 999999877632 347889999999999996544
No 103
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.41 E-value=6.3e-13 Score=125.58 Aligned_cols=105 Identities=20% Similarity=0.306 Sum_probs=87.2
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCC
Q psy7829 121 ADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADARE 200 (511)
Q Consensus 121 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 200 (511)
..+++.+. ..++.+|||+|||+|.++..+++.+ +..+++++|+|+.+++.++++. ++++++++|+..
T Consensus 23 ~~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~~ 89 (259)
T 2p35_A 23 RDLLAQVP--LERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADRL----------PNTNFGKADLAT 89 (259)
T ss_dssp HHHHTTCC--CSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHS----------TTSEEEECCTTT
T ss_pred HHHHHhcC--CCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC----------CCcEEEECChhh
Confidence 33444443 5678899999999999999999987 6678999999999999999872 268999999987
Q ss_pred CCCCCCCccEEEecCCCCch------HHHHHhhcccCcEEEEEEc
Q psy7829 201 GYLPEAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 201 ~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~~ 239 (511)
.. ..++||+|+++.+++++ ++++.+.|||||.+++.+.
T Consensus 90 ~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 90 WK-PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp CC-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cC-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 55 56789999999888765 3678899999999999764
No 104
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.41 E-value=7.6e-13 Score=132.41 Aligned_cols=106 Identities=24% Similarity=0.402 Sum_probs=88.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhcc-----CCCcCCCCCeEEEEccCCCC----
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKG-----NKDLLDSGRVRIVEADAREG---- 201 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-----~~~~~~~~~v~~~~~d~~~~---- 201 (511)
..++.+|||+|||+|..+..+++.+++.++|+++|+|+.+++.|+++++.. |. +..++++|+++|+.+.
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~--~~~~~v~~~~~d~~~l~~~~ 158 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGS--PSRSNVRFLKGFIENLATAE 158 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSS--TTCCCEEEEESCTTCGGGCB
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccc--cCCCceEEEEccHHHhhhcc
Confidence 457889999999999999999999877889999999999999999987653 10 1236899999999864
Q ss_pred --CCCCCCccEEEecCCCCch------HHHHHhhcccCcEEEEEE
Q psy7829 202 --YLPEAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 202 --~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~ 238 (511)
..+.++||+|+++.+++++ ++++.++|||||+|++..
T Consensus 159 ~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 159 PEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp SCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 4445789999999888664 488999999999999863
No 105
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.41 E-value=1.6e-12 Score=117.41 Aligned_cols=105 Identities=23% Similarity=0.175 Sum_probs=85.9
Q ss_pred HHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC
Q psy7829 123 AAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY 202 (511)
Q Consensus 123 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 202 (511)
+++.+. ..++.+|||+|||+|..+..+++. ..+++++|+++.+++.+++++...+ .++++++.+|+.+..
T Consensus 24 l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~d~~~~~ 93 (199)
T 2xvm_A 24 VLEAVK--VVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIEN-----LDNLHTRVVDLNNLT 93 (199)
T ss_dssp HHHHTT--TSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHT-----CTTEEEEECCGGGCC
T ss_pred HHHHhh--ccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCC-----CCCcEEEEcchhhCC
Confidence 444454 456789999999999999999987 3479999999999999999987753 457999999988654
Q ss_pred CCCCCccEEEecCCCCch--------HHHHHhhcccCcEEEEEE
Q psy7829 203 LPEAPYDVIYYGGCVSEV--------PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 203 ~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~~ 238 (511)
. .++||+|++..+++++ .+++.+.|||||.+++..
T Consensus 94 ~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 94 F-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp C-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred C-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 4 5789999999877654 377899999999987744
No 106
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.41 E-value=4.8e-13 Score=118.72 Aligned_cols=119 Identities=14% Similarity=0.121 Sum_probs=90.3
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccC
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADA 198 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 198 (511)
+...+++.+. ...++.+|||+|||+|.++..+++. +..+|+++|+++.+++.|++++...+ ..++++++.+|+
T Consensus 18 ~~~~~~~~l~-~~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~~~d~ 90 (177)
T 2esr_A 18 VRGAIFNMIG-PYFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTK----AENRFTLLKMEA 90 (177)
T ss_dssp CHHHHHHHHC-SCCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTT----CGGGEEEECSCH
T ss_pred HHHHHHHHHH-hhcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcC----CCCceEEEECcH
Confidence 3344555553 1457889999999999999999886 34689999999999999999998864 234799999998
Q ss_pred CCCC-CCCCCccEEEecCCCC-----chHHHHH--hhcccCcEEEEEEccCCCc
Q psy7829 199 REGY-LPEAPYDVIYYGGCVS-----EVPSRVL--NQLKKGGRILAPIGPMDDF 244 (511)
Q Consensus 199 ~~~~-~~~~~fD~I~~~~~~~-----~~~~~~~--~~LkpgG~l~~~~~~~~~~ 244 (511)
.+.. ...+.||+|+++.++. .+.+.+. +.|||||.+++........
T Consensus 91 ~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~~ 144 (177)
T 2esr_A 91 ERAIDCLTGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKTVLL 144 (177)
T ss_dssp HHHHHHBCSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTCCC
T ss_pred HHhHHhhcCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECCcccc
Confidence 6521 1235799999998763 2235555 8899999999987765543
No 107
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.40 E-value=9.5e-13 Score=120.04 Aligned_cols=113 Identities=16% Similarity=0.118 Sum_probs=87.3
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCC
Q psy7829 120 IADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAR 199 (511)
Q Consensus 120 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 199 (511)
...+++.+. ...++.+|||+|||+|..+..++... ..+|+++|+|+.+++.+++++...+ .+++++++|+.
T Consensus 11 ~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~ 81 (209)
T 2p8j_A 11 LYRFLKYCN-ESNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENN------FKLNISKGDIR 81 (209)
T ss_dssp HHHHHHHHH-HSSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHT------CCCCEEECCTT
T ss_pred HHHHHHHHh-ccCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcC------CceEEEECchh
Confidence 334444444 35678999999999999855444443 4589999999999999999987642 46899999998
Q ss_pred CCCCCCCCccEEEecCCCCch--------HHHHHhhcccCcEEEEEEccC
Q psy7829 200 EGYLPEAPYDVIYYGGCVSEV--------PSRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 200 ~~~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~~~~~ 241 (511)
+...+.++||+|++..+++++ .+++.+.|||||.+++.....
T Consensus 82 ~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 82 KLPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp SCCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred hCCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 755455789999998877665 267899999999999976543
No 108
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.40 E-value=7e-13 Score=120.32 Aligned_cols=116 Identities=15% Similarity=0.085 Sum_probs=87.6
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccC
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADA 198 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 198 (511)
+...+++.+... .++.+|||+|||+|.++..++... ..+|+++|+|+.+++.|+++++.++ .++++++++|+
T Consensus 41 ~~~~l~~~l~~~-~~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~-----~~~v~~~~~D~ 112 (202)
T 2fpo_A 41 VRETLFNWLAPV-IVDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLK-----AGNARVVNSNA 112 (202)
T ss_dssp HHHHHHHHHHHH-HTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTT-----CCSEEEECSCH
T ss_pred HHHHHHHHHHhh-cCCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcC-----CCcEEEEECCH
Confidence 444455555411 267899999999999999877764 2489999999999999999998864 36899999998
Q ss_pred CCC-CCCCCCccEEEecCCCC-----chHHHHHh--hcccCcEEEEEEccCC
Q psy7829 199 REG-YLPEAPYDVIYYGGCVS-----EVPSRVLN--QLKKGGRILAPIGPMD 242 (511)
Q Consensus 199 ~~~-~~~~~~fD~I~~~~~~~-----~~~~~~~~--~LkpgG~l~~~~~~~~ 242 (511)
.+. ....++||+|+++.+++ .+.+.+.+ +|+|||.+++......
T Consensus 113 ~~~~~~~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 113 MSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVEN 164 (202)
T ss_dssp HHHHSSCCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEEGGG
T ss_pred HHHHhhcCCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEECCCc
Confidence 652 22346899999998854 23355544 4999999999876543
No 109
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.40 E-value=7.1e-13 Score=116.70 Aligned_cols=119 Identities=16% Similarity=0.091 Sum_probs=91.6
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEc
Q psy7829 117 PNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEA 196 (511)
Q Consensus 117 p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 196 (511)
..+...+++.+...++++.+|||+|||+|.++..+++.. + +|+++|+++.+++.|++++..++ . +++++++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~--~v~~vD~~~~~~~~a~~~~~~~~-----~-~~~~~~~ 95 (171)
T 1ws6_A 25 VRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEG-W--EAVLVEKDPEAVRLLKENVRRTG-----L-GARVVAL 95 (171)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTT-C--EEEEECCCHHHHHHHHHHHHHHT-----C-CCEEECS
T ss_pred HHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCC-C--eEEEEeCCHHHHHHHHHHHHHcC-----C-ceEEEec
Confidence 345555666665334478899999999999999999874 4 39999999999999999998764 2 7999999
Q ss_pred cCCCCCC----CCCCccEEEecCCCC----chHHHHH--hhcccCcEEEEEEccCCCc
Q psy7829 197 DAREGYL----PEAPYDVIYYGGCVS----EVPSRVL--NQLKKGGRILAPIGPMDDF 244 (511)
Q Consensus 197 d~~~~~~----~~~~fD~I~~~~~~~----~~~~~~~--~~LkpgG~l~~~~~~~~~~ 244 (511)
|+.+... ..++||+|+++.+++ .+.+.+. +.|||||.+++.+......
T Consensus 96 d~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~~ 153 (171)
T 1ws6_A 96 PVEVFLPEAKAQGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPKDLYL 153 (171)
T ss_dssp CHHHHHHHHHHTTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEETTSCC
T ss_pred cHHHHHHhhhccCCceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCCccCC
Confidence 9865211 124799999997652 3446666 8999999999988765544
No 110
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.40 E-value=6.8e-13 Score=121.25 Aligned_cols=101 Identities=19% Similarity=0.194 Sum_probs=82.9
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC-CCCCCccE
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY-LPEAPYDV 210 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~ 210 (511)
.++.+|||+|||+|+.+..+++.+++.++|+++|+++.+++.|+++++..+ ..++++++++|+.+.. ...+ ||+
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~-fD~ 129 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG----LIDRVELQVGDPLGIAAGQRD-IDI 129 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS----GGGGEEEEESCHHHHHTTCCS-EEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC----CCceEEEEEecHHHHhccCCC-CCE
Confidence 467899999999999999999987447899999999999999999998764 2357999999986421 2235 999
Q ss_pred EEecCCCCc---hHHHHHhhcccCcEEEEE
Q psy7829 211 IYYGGCVSE---VPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 211 I~~~~~~~~---~~~~~~~~LkpgG~l~~~ 237 (511)
|+++..... +.+++.+.|||||.+++.
T Consensus 130 v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 130 LFMDCDVFNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp EEEETTTSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEcCChhhhHHHHHHHHHhcCCCeEEEEE
Confidence 999876543 457889999999999874
No 111
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.40 E-value=2.2e-12 Score=125.80 Aligned_cols=100 Identities=17% Similarity=0.163 Sum_probs=84.9
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
+.++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.|++++...+ ..++++++.+|+.+.. ++||+
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~---~~fD~ 158 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASID----TNRSRQVLLQGWEDFA---EPVDR 158 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSC----CSSCEEEEESCGGGCC---CCCSE
T ss_pred CCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcC----CCCceEEEECChHHCC---CCcCE
Confidence 5688999999999999999999986 3489999999999999999988764 3457999999987642 78999
Q ss_pred EEecCCCCch--------HHHHHhhcccCcEEEEEEc
Q psy7829 211 IYYGGCVSEV--------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 211 I~~~~~~~~~--------~~~~~~~LkpgG~l~~~~~ 239 (511)
|++..+++++ .+++.++|||||.+++...
T Consensus 159 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 159 IVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp EEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 9999877665 3678999999999998544
No 112
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.40 E-value=5.6e-13 Score=119.28 Aligned_cols=120 Identities=16% Similarity=0.143 Sum_probs=91.3
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEc
Q psy7829 117 PNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEA 196 (511)
Q Consensus 117 p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 196 (511)
..+...+++.+. ...++.+|||+|||+|.++..+++. +..+|+++|+++.+++.|++++..++ ..++++++++
T Consensus 29 ~~~~~~~~~~l~-~~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~~~ 101 (187)
T 2fhp_A 29 DKVKESIFNMIG-PYFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITK----EPEKFEVRKM 101 (187)
T ss_dssp HHHHHHHHHHHC-SCCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHT----CGGGEEEEES
T ss_pred HHHHHHHHHHHH-hhcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhC----CCcceEEEEC
Confidence 345556666663 1357889999999999999988874 34689999999999999999998764 2357999999
Q ss_pred cCCCCCC----CCCCccEEEecCCCC-----chHHHH--HhhcccCcEEEEEEccCCC
Q psy7829 197 DAREGYL----PEAPYDVIYYGGCVS-----EVPSRV--LNQLKKGGRILAPIGPMDD 243 (511)
Q Consensus 197 d~~~~~~----~~~~fD~I~~~~~~~-----~~~~~~--~~~LkpgG~l~~~~~~~~~ 243 (511)
|+.+... ..++||+|+++.++. .....+ .++|||||.+++.......
T Consensus 102 d~~~~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 102 DANRALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp CHHHHHHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred cHHHHHHHHHhcCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 9865221 147899999998753 123445 6779999999998776554
No 113
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.40 E-value=5.7e-13 Score=124.12 Aligned_cols=103 Identities=23% Similarity=0.336 Sum_probs=85.1
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC-------
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL------- 203 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------- 203 (511)
..++.+|||||||+|+.+..+++.+++.++|+++|+++.+++.|+++++..+ ..++++++.+|+.+..+
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g----~~~~i~~~~gda~~~l~~l~~~~~ 143 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG----VEHKINFIESDAMLALDNLLQGQE 143 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT----CGGGEEEEESCHHHHHHHHHHSTT
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEEcCHHHHHHHHHhccC
Confidence 4567899999999999999999998557899999999999999999998865 34579999999864211
Q ss_pred CCCCccEEEecCCCCc---hHHHHHhhcccCcEEEEE
Q psy7829 204 PEAPYDVIYYGGCVSE---VPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 204 ~~~~fD~I~~~~~~~~---~~~~~~~~LkpgG~l~~~ 237 (511)
..++||+|+++..... +.+.+.+.|||||.+++.
T Consensus 144 ~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 144 SEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence 1368999999876543 447889999999999873
No 114
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.40 E-value=1.3e-12 Score=119.69 Aligned_cols=109 Identities=22% Similarity=0.243 Sum_probs=87.1
Q ss_pred HHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC
Q psy7829 123 AAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY 202 (511)
Q Consensus 123 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 202 (511)
+.+.+...+.++.+|||+|||+|.++..+++.. +. +++++|+++.+++.++++... .++++++++|+.+..
T Consensus 32 ~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~-~~-~v~~~D~s~~~~~~a~~~~~~-------~~~i~~~~~d~~~~~ 102 (215)
T 2pxx_A 32 FRALLEPELRPEDRILVLGCGNSALSYELFLGG-FP-NVTSVDYSSVVVAAMQACYAH-------VPQLRWETMDVRKLD 102 (215)
T ss_dssp HHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTT-CC-CEEEEESCHHHHHHHHHHTTT-------CTTCEEEECCTTSCC
T ss_pred HHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcC-CC-cEEEEeCCHHHHHHHHHhccc-------CCCcEEEEcchhcCC
Confidence 344555456788999999999999999999874 32 799999999999999998754 247999999998754
Q ss_pred CCCCCccEEEecCCCC---------------------chHHHHHhhcccCcEEEEEEcc
Q psy7829 203 LPEAPYDVIYYGGCVS---------------------EVPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 203 ~~~~~fD~I~~~~~~~---------------------~~~~~~~~~LkpgG~l~~~~~~ 240 (511)
...++||+|+++.+++ .+++++.+.|||||.+++....
T Consensus 103 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 103 FPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp SCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 4457899999876552 2347889999999999986653
No 115
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.40 E-value=5.1e-13 Score=124.48 Aligned_cols=99 Identities=16% Similarity=0.171 Sum_probs=79.2
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCC--CCCCCCc
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREG--YLPEAPY 208 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~f 208 (511)
..++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.|+++.... ..+++++++|+.+. ...+++|
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~------~~~v~~~~~d~~~~~~~~~~~~f 129 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQ------THKVIPLKGLWEDVAPTLPDGHF 129 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGC------SSEEEEEESCHHHHGGGSCTTCE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhc------CCCeEEEecCHHHhhcccCCCce
Confidence 4678899999999999999997653 348999999999999999998763 25799999998754 3345789
Q ss_pred cEEEe-cCCC-----C-----chHHHHHhhcccCcEEEEE
Q psy7829 209 DVIYY-GGCV-----S-----EVPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 209 D~I~~-~~~~-----~-----~~~~~~~~~LkpgG~l~~~ 237 (511)
|+|++ .... + .+.+++.++|||||++++.
T Consensus 130 D~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred EEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 99999 3321 1 2257899999999999874
No 116
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.40 E-value=1.6e-12 Score=129.13 Aligned_cols=101 Identities=26% Similarity=0.361 Sum_probs=85.9
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEE
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVI 211 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I 211 (511)
.++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.|++++..++ .+++++++|+.+.....++||+|
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g---~~V~gvDis~~al~~A~~n~~~~~------~~v~~~~~D~~~~~~~~~~fD~I 302 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMG---AEVVGVEDDLASVLSLQKGLEANA------LKAQALHSDVDEALTEEARFDII 302 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTT---CEEEEEESBHHHHHHHHHHHHHTT------CCCEEEECSTTTTSCTTCCEEEE
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcC------CCeEEEEcchhhccccCCCeEEE
Confidence 378899999999999999999873 489999999999999999998864 14899999998765545789999
Q ss_pred EecCCCCc-----------hHHHHHhhcccCcEEEEEEccC
Q psy7829 212 YYGGCVSE-----------VPSRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 212 ~~~~~~~~-----------~~~~~~~~LkpgG~l~~~~~~~ 241 (511)
+++.++++ +.+++.+.|||||.+++.....
T Consensus 303 i~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 303 VTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp EECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred EECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 99988875 3478899999999999976543
No 117
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.40 E-value=1.2e-12 Score=121.16 Aligned_cols=102 Identities=23% Similarity=0.308 Sum_probs=84.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC---CCCCC
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY---LPEAP 207 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~ 207 (511)
+.++.+|||+|||+|.++..+++.+++.++|+++|+++.+++.++++++.. ++++++++|+.... ...++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-------~~v~~~~~d~~~~~~~~~~~~~ 143 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-------RNIVPILGDATKPEEYRALVPK 143 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-------TTEEEEECCTTCGGGGTTTCCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-------CCCEEEEccCCCcchhhcccCC
Confidence 567889999999999999999998766789999999999999999988762 58999999987621 12358
Q ss_pred ccEEEecCCCCc----hHHHHHhhcccCcEEEEEEc
Q psy7829 208 YDVIYYGGCVSE----VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 208 fD~I~~~~~~~~----~~~~~~~~LkpgG~l~~~~~ 239 (511)
||+|+++.+... +..++.+.|||||.+++.+.
T Consensus 144 ~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 179 (227)
T 1g8a_A 144 VDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAVK 179 (227)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 999999877543 25789999999999998643
No 118
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.39 E-value=2.3e-12 Score=121.30 Aligned_cols=100 Identities=18% Similarity=0.179 Sum_probs=84.9
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
..++.+|||+|||+|.++..+++.. ..+|+++|+++.+++.+++++.. ..+++++++|+.....+.++||+
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~ 161 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAG-------MPVGKFILASMETATLPPNTYDL 161 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTT-------SSEEEEEESCGGGCCCCSSCEEE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhcc-------CCceEEEEccHHHCCCCCCCeEE
Confidence 4578899999999999999999886 45799999999999999998765 24799999998865445578999
Q ss_pred EEecCCCCch--------HHHHHhhcccCcEEEEEEc
Q psy7829 211 IYYGGCVSEV--------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 211 I~~~~~~~~~--------~~~~~~~LkpgG~l~~~~~ 239 (511)
|++..+++++ ++++.+.|||||.+++...
T Consensus 162 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 162 IVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 9999888766 3678999999999999764
No 119
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.39 E-value=1.2e-12 Score=121.88 Aligned_cols=100 Identities=16% Similarity=0.232 Sum_probs=82.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEEE
Q psy7829 133 DGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVIY 212 (511)
Q Consensus 133 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~ 212 (511)
++.+|||+|||+|..+..+++. ..+|+++|+|+.+++.|++++...+ ...+++++++|+.+.. ..++||+|+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~-~~~~fD~v~ 137 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSSP----KAEYFSFVKEDVFTWR-PTELFDLIF 137 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTSG----GGGGEEEECCCTTTCC-CSSCEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhccC----CCcceEEEECchhcCC-CCCCeeEEE
Confidence 4459999999999999988763 4679999999999999999987643 2457999999998754 346899999
Q ss_pred ecCCCCch--------HHHHHhhcccCcEEEEEEcc
Q psy7829 213 YGGCVSEV--------PSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 213 ~~~~~~~~--------~~~~~~~LkpgG~l~~~~~~ 240 (511)
+..+++++ .+++.+.|||||.+++....
T Consensus 138 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 138 DYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp EESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEec
Confidence 99887654 37889999999999986543
No 120
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.39 E-value=4.6e-13 Score=124.66 Aligned_cols=98 Identities=16% Similarity=0.195 Sum_probs=78.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCC--CCCCCCc
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREG--YLPEAPY 208 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~f 208 (511)
..+|.+|||||||+|..+..+++.. + .++++||+|+.+++.|+++.... ..++.++.+|+... ..++++|
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~-~-~~v~~id~~~~~~~~a~~~~~~~------~~~~~~~~~~a~~~~~~~~~~~F 129 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAP-I-DEHWIIECNDGVFQRLRDWAPRQ------THKVIPLKGLWEDVAPTLPDGHF 129 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSC-E-EEEEEEECCHHHHHHHHHHGGGC------SSEEEEEESCHHHHGGGSCTTCE
T ss_pred ccCCCeEEEECCCccHHHHHHHHhC-C-cEEEEEeCCHHHHHHHHHHHhhC------CCceEEEeehHHhhcccccccCC
Confidence 4689999999999999999998864 3 57999999999999999998874 34788999987532 2345789
Q ss_pred cEEEecCCCC-----c------hHHHHHhhcccCcEEEE
Q psy7829 209 DVIYYGGCVS-----E------VPSRVLNQLKKGGRILA 236 (511)
Q Consensus 209 D~I~~~~~~~-----~------~~~~~~~~LkpgG~l~~ 236 (511)
|.|+.+.... + +.+++.++|||||+|++
T Consensus 130 D~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred ceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEE
Confidence 9998765432 2 23678999999999976
No 121
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.39 E-value=8.6e-13 Score=133.90 Aligned_cols=174 Identities=16% Similarity=0.191 Sum_probs=118.7
Q ss_pred CCCCCCCCcccCCCccHHHHHHHHHHcCCCCC--HHHHHHHHhCCCCCccCCCCCCCcccccCCCcccchhHHHHHHHHH
Q psy7829 49 IPPPDNLNHFKNEGTCQTDLVNHLRDIGKIRT--ERVAQAFYKVDRGNFANEEPYQDVSASLGYAGVMNAPNQIADAAEN 126 (511)
Q Consensus 49 l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~~a~~~~~r~~~~~~~~y~~~~~~~~~~~~~~~p~~~~~~~~~ 126 (511)
..+++..+++|+...+...+.+.|...|+... +-...++.......+.....|..+.+.+ +......+...
T Consensus 169 ~~~~~~~~Rvn~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-------qd~~s~~~~~~ 241 (429)
T 1sqg_A 169 NQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV-------QDASAQGCMTW 241 (429)
T ss_dssp TSCCCEEEEECTTTCCHHHHHHHHHHTTCCEECCTTCTTEEEESSCCCGGGSTTGGGTSEEE-------CCHHHHTHHHH
T ss_pred CCCCCeEEEEcCCCCCHHHHHHHHHhCCCceeecCCCCCEEEECCCCCcccChHHhCCCeEe-------eCHHHHHHHHH
Confidence 44556778899988899999999988775211 0000011000001111112333332222 22233334445
Q ss_pred HhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC--CC
Q psy7829 127 LKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY--LP 204 (511)
Q Consensus 127 l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~ 204 (511)
+. ..++.+|||+|||+|..+..+++.. ++++|+++|+++.+++.+++++++.| . +++++++|+.... ..
T Consensus 242 l~--~~~g~~VLDlgaG~G~~t~~la~~~-~~~~v~a~D~~~~~l~~~~~~~~~~g-----~-~~~~~~~D~~~~~~~~~ 312 (429)
T 1sqg_A 242 LA--PQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLG-----M-KATVKQGDGRYPSQWCG 312 (429)
T ss_dssp HC--CCTTCEEEEESCTTCHHHHHHHHHC-TTCEEEEEESSTTTHHHHHHHHHHTT-----C-CCEEEECCTTCTHHHHT
T ss_pred cC--CCCcCeEEEECCCchHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHHcC-----C-CeEEEeCchhhchhhcc
Confidence 54 6789999999999999999999987 45899999999999999999999864 2 5789999987643 23
Q ss_pred CCCccEEEecCCCC----------------------------chHHHHHhhcccCcEEEEEE
Q psy7829 205 EAPYDVIYYGGCVS----------------------------EVPSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 205 ~~~fD~I~~~~~~~----------------------------~~~~~~~~~LkpgG~l~~~~ 238 (511)
.++||+|+++.++. .+++.+.+.|||||+++++.
T Consensus 313 ~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 313 EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 36899999988763 23467889999999999865
No 122
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.39 E-value=5.7e-13 Score=124.44 Aligned_cols=102 Identities=16% Similarity=0.143 Sum_probs=83.8
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCC---CCCc
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLP---EAPY 208 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~f 208 (511)
.++.+|||+|||+|..+..++... +..+|+++|+|+.+++.|++++...+ .++++++++|+.+.... .++|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~f 142 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQ-----LENTTFCHDRAETFGQRKDVRESY 142 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHT-----CSSEEEEESCHHHHTTCTTTTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcC-----CCCEEEEeccHHHhcccccccCCc
Confidence 467899999999999999999864 67899999999999999999998864 45799999998653321 4789
Q ss_pred cEEEecCCCC--chHHHHHhhcccCcEEEEEEc
Q psy7829 209 DVIYYGGCVS--EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 209 D~I~~~~~~~--~~~~~~~~~LkpgG~l~~~~~ 239 (511)
|+|++..... .+.+.+.+.|||||.+++..+
T Consensus 143 D~V~~~~~~~~~~~l~~~~~~LkpgG~l~~~~g 175 (240)
T 1xdz_A 143 DIVTARAVARLSVLSELCLPLVKKNGLFVALKA 175 (240)
T ss_dssp EEEEEECCSCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred cEEEEeccCCHHHHHHHHHHhcCCCCEEEEEeC
Confidence 9999987432 345788899999999998643
No 123
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.39 E-value=1.3e-12 Score=121.18 Aligned_cols=99 Identities=23% Similarity=0.304 Sum_probs=82.7
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCC----CCCCCC
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADARE----GYLPEA 206 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~----~~~~~~ 206 (511)
+.++.+|||+|||+|.++..+++..+ .++|+++|+++.+++.+++++.. .+++.++.+|+.. .... +
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~-------~~~v~~~~~d~~~~~~~~~~~-~ 142 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAE-------RENIIPILGDANKPQEYANIV-E 142 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTT-------CTTEEEEECCTTCGGGGTTTS-C
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhc-------CCCeEEEECCCCCcccccccC-c
Confidence 56788999999999999999999974 67999999999999999998765 2589999999876 3333 6
Q ss_pred CccEEEecCCCC----chHHHHHhhcccCcEEEEEE
Q psy7829 207 PYDVIYYGGCVS----EVPSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 207 ~fD~I~~~~~~~----~~~~~~~~~LkpgG~l~~~~ 238 (511)
+||+|+.+.+-. .+.+++.+.|||||.+++.+
T Consensus 143 ~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 178 (230)
T 1fbn_A 143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI 178 (230)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEEE
Confidence 899999764433 23688999999999999964
No 124
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.39 E-value=9.1e-13 Score=123.33 Aligned_cols=108 Identities=11% Similarity=0.083 Sum_probs=80.7
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccC
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADA 198 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 198 (511)
....+++.+. +.++.+|||+|||+|.++..+++.. .+|+++|+|+.|++.|++++... .+.....++
T Consensus 33 ~~~~il~~l~--l~~g~~VLDlGcGtG~~a~~La~~g---~~V~gvD~S~~ml~~Ar~~~~~~--------~v~~~~~~~ 99 (261)
T 3iv6_A 33 DRENDIFLEN--IVPGSTVAVIGASTRFLIEKALERG---ASVTVFDFSQRMCDDLAEALADR--------CVTIDLLDI 99 (261)
T ss_dssp HHHHHHHTTT--CCTTCEEEEECTTCHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTSSS--------CCEEEECCT
T ss_pred HHHHHHHhcC--CCCcCEEEEEeCcchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHhc--------cceeeeeec
Confidence 4555666665 7789999999999999999999874 47999999999999999987652 123222232
Q ss_pred CC--CCCCCCCccEEEecCCCCch--------HHHHHhhcccCcEEEEEEcc
Q psy7829 199 RE--GYLPEAPYDVIYYGGCVSEV--------PSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 199 ~~--~~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~~~~ 240 (511)
.. .....++||+|+++.+++++ +.++.++| |||++++++..
T Consensus 100 ~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 100 TAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp TSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred ccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 21 11124689999999887654 36778899 99999998764
No 125
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.39 E-value=2.2e-12 Score=122.56 Aligned_cols=105 Identities=21% Similarity=0.150 Sum_probs=89.8
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCcc
Q psy7829 130 HLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYD 209 (511)
Q Consensus 130 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 209 (511)
.+.++.+|||+|||+|.++..+++.. +.++|+++|+++.+++.|++|++.++ .+++.++++|+.+. +..+.||
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~-~~~~V~~vD~s~~av~~a~~n~~~n~-----l~~~~~~~~d~~~~-~~~~~~D 188 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYS-KPKLVYAIEKNPTAYHYLCENIKLNK-----LNNVIPILADNRDV-ELKDVAD 188 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHT-CCSEEEEEECCHHHHHHHHHHHHHTT-----CSSEEEEESCGGGC-CCTTCEE
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcC-----CCCEEEEECChHHc-CccCCce
Confidence 36788999999999999999999986 46789999999999999999999864 45799999999875 3356899
Q ss_pred EEEecCCC--CchHHHHHhhcccCcEEEEEEccC
Q psy7829 210 VIYYGGCV--SEVPSRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 210 ~I~~~~~~--~~~~~~~~~~LkpgG~l~~~~~~~ 241 (511)
+|+++.+. ..+...+.+.|||||.+++.+...
T Consensus 189 ~Vi~d~p~~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 189 RVIMGYVHKTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp EEEECCCSSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEEECCcccHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 99999875 346688999999999999876643
No 126
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.38 E-value=1.2e-12 Score=123.38 Aligned_cols=98 Identities=20% Similarity=0.304 Sum_probs=83.2
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEE
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVI 211 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I 211 (511)
.++.+|||+|||+|.++..+++.. + .+|+++|+|+.+++.|+++.. ..+++++++|+.....+.++||+|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~~~~~~~fD~v 112 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHG-A-KKVLGIDLSERMLTEAKRKTT--------SPVVCYEQKAIEDIAIEPDAYNVV 112 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-C-SEEEEEESCHHHHHHHHHHCC--------CTTEEEEECCGGGCCCCTTCEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHcC-C-CEEEEEECCHHHHHHHHHhhc--------cCCeEEEEcchhhCCCCCCCeEEE
Confidence 378899999999999999999874 3 389999999999999998864 247999999998655456899999
Q ss_pred EecCCCCch------HHHHHhhcccCcEEEEEEc
Q psy7829 212 YYGGCVSEV------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 212 ~~~~~~~~~------~~~~~~~LkpgG~l~~~~~ 239 (511)
++..+++++ ++++.+.|||||.+++.+.
T Consensus 113 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 113 LSSLALHYIASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 999887654 3789999999999999754
No 127
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.38 E-value=2.6e-12 Score=119.28 Aligned_cols=106 Identities=19% Similarity=0.233 Sum_probs=86.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
++++.+|||+|||+|.++..+++. ..+|+++|+++.+++.+++++...+.......+++++++|+.......++||+
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 104 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDF 104 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeE
Confidence 568899999999999999999987 34799999999999999999887542111134689999999875555688999
Q ss_pred EEecCCCCch---------HHHHHhhcccCcEEEEEEc
Q psy7829 211 IYYGGCVSEV---------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 211 I~~~~~~~~~---------~~~~~~~LkpgG~l~~~~~ 239 (511)
|++..+++++ ++++.+.|||||.+++...
T Consensus 105 v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 105 AVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp EEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 9998877543 4678999999999998654
No 128
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.38 E-value=9.1e-13 Score=128.25 Aligned_cols=120 Identities=14% Similarity=0.158 Sum_probs=89.1
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCc--CCCCCeEEEEc
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDL--LDSGRVRIVEA 196 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~--~~~~~v~~~~~ 196 (511)
+...+++.+....+++.+|||+|||+|..+..+++. +..+++++|+|+.+++.|+++....+... ....+++++++
T Consensus 20 l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~ 97 (313)
T 3bgv_A 20 LIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITA 97 (313)
T ss_dssp HHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEEC
T ss_pred HHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEe
Confidence 344455555534457889999999999999999874 45689999999999999999876531000 01347999999
Q ss_pred cCCCCC----C--CCCCccEEEecCCCCch----------HHHHHhhcccCcEEEEEEcc
Q psy7829 197 DAREGY----L--PEAPYDVIYYGGCVSEV----------PSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 197 d~~~~~----~--~~~~fD~I~~~~~~~~~----------~~~~~~~LkpgG~l~~~~~~ 240 (511)
|+.... . ..++||+|++..+++++ ++++.+.|||||.+++.+..
T Consensus 98 D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 98 DSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred cccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 998643 2 23589999999888655 26788999999999997653
No 129
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.38 E-value=5.7e-13 Score=125.59 Aligned_cols=99 Identities=13% Similarity=0.161 Sum_probs=76.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCC----CCCC--CC
Q psy7829 133 DGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADARE----GYLP--EA 206 (511)
Q Consensus 133 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~----~~~~--~~ 206 (511)
++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|++++..++ ...+++++++|+.+ .+.. .+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNN----LSDLIKVVKVPQKTLLMDALKEESEI 139 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECCTTCSSTTTSTTCCSC
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcC----CCccEEEEEcchhhhhhhhhhcccCC
Confidence 57799999999999999999886 56789999999999999999998864 23469999999754 2221 25
Q ss_pred CccEEEecCCCCchH---------------------HHHHhhcccCcEEEE
Q psy7829 207 PYDVIYYGGCVSEVP---------------------SRVLNQLKKGGRILA 236 (511)
Q Consensus 207 ~fD~I~~~~~~~~~~---------------------~~~~~~LkpgG~l~~ 236 (511)
+||+|++++++.... ..+.++|||||.+.+
T Consensus 140 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 140 IYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp CBSEEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred cccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 899999997764321 234567788887765
No 130
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.38 E-value=2.8e-12 Score=123.10 Aligned_cols=105 Identities=20% Similarity=0.212 Sum_probs=86.7
Q ss_pred HHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC
Q psy7829 123 AAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY 202 (511)
Q Consensus 123 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 202 (511)
+++.+. ..++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.+++++...+ . +++++++|+....
T Consensus 112 ~~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~g---~~v~~vD~s~~~~~~a~~~~~~~~-----~-~~~~~~~d~~~~~ 180 (286)
T 3m70_A 112 VVDAAK--IISPCKVLDLGCGQGRNSLYLSLLG---YDVTSWDHNENSIAFLNETKEKEN-----L-NISTALYDINAAN 180 (286)
T ss_dssp HHHHHH--HSCSCEEEEESCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT-----C-CEEEEECCGGGCC
T ss_pred HHHHhh--ccCCCcEEEECCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHHcC-----C-ceEEEEecccccc
Confidence 444554 3478899999999999999999873 379999999999999999998854 2 8999999998754
Q ss_pred CCCCCccEEEecCCCCch--------HHHHHhhcccCcEEEEEEc
Q psy7829 203 LPEAPYDVIYYGGCVSEV--------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 203 ~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~~~ 239 (511)
. .++||+|+++.+++++ .+++.+.|||||.+++...
T Consensus 181 ~-~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 181 I-QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp C-CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred c-cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 4 5889999999887643 3778999999999887544
No 131
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.38 E-value=5.8e-13 Score=120.94 Aligned_cols=96 Identities=17% Similarity=0.165 Sum_probs=80.9
Q ss_pred CCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEEEe
Q psy7829 134 GAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVIYY 213 (511)
Q Consensus 134 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~ 213 (511)
+.+|||+|||+|.++..+++.. .+|+++|+++.+++.++++. ++++++++|+.+.....++||+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~fD~v~~ 108 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG---HQIEGLEPATRLVELARQTH----------PSVTFHHGTITDLSDSPKRWAGLLA 108 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT---CCEEEECCCHHHHHHHHHHC----------TTSEEECCCGGGGGGSCCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhC----------CCCeEEeCcccccccCCCCeEEEEe
Confidence 8899999999999999999873 37999999999999999873 2689999999865445588999999
Q ss_pred cCCCCch--------HHHHHhhcccCcEEEEEEccCC
Q psy7829 214 GGCVSEV--------PSRVLNQLKKGGRILAPIGPMD 242 (511)
Q Consensus 214 ~~~~~~~--------~~~~~~~LkpgG~l~~~~~~~~ 242 (511)
..+++++ ++++.+.|||||.+++.+....
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 109 WYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp ESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred hhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 8887665 3788999999999999765443
No 132
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.37 E-value=1.6e-12 Score=123.12 Aligned_cols=105 Identities=19% Similarity=0.259 Sum_probs=85.5
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCC
Q psy7829 120 IADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAR 199 (511)
Q Consensus 120 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 199 (511)
...+.+.+.....++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.|++++. +++++++|+.
T Consensus 37 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~----------~~~~~~~d~~ 103 (263)
T 3pfg_A 37 AADLAALVRRHSPKAASLLDVACGTGMHLRHLADSF---GTVEGLELSADMLAIARRRNP----------DAVLHHGDMR 103 (263)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTS---SEEEEEESCHHHHHHHHHHCT----------TSEEEECCTT
T ss_pred HHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCC----------CCEEEECChH
Confidence 344555555456678899999999999999998874 379999999999999998743 5899999998
Q ss_pred CCCCCCCCccEEEecC-CCCch---------HHHHHhhcccCcEEEEEE
Q psy7829 200 EGYLPEAPYDVIYYGG-CVSEV---------PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 200 ~~~~~~~~fD~I~~~~-~~~~~---------~~~~~~~LkpgG~l~~~~ 238 (511)
+... .++||+|++.. +++++ ++++.+.|||||.+++..
T Consensus 104 ~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 104 DFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp TCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred HCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 7544 58899999987 66655 367899999999999963
No 133
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.37 E-value=6e-12 Score=111.92 Aligned_cols=112 Identities=21% Similarity=0.263 Sum_probs=90.1
Q ss_pred cchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEE
Q psy7829 114 MNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRI 193 (511)
Q Consensus 114 ~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 193 (511)
...+.+...+++.+. ..++.+|||+|||+|.++..+++ +..+++++|+++.+++.+++++..++ .+++++
T Consensus 18 ~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~~~ 87 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLN--LNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFN-----IKNCQI 87 (183)
T ss_dssp CCCHHHHHHHHHHHC--CCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTT-----CCSEEE
T ss_pred cCHHHHHHHHHHHcC--CCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcC-----CCcEEE
Confidence 445567777777775 67889999999999999999988 45789999999999999999998864 468999
Q ss_pred EEccCCCCCCCCCCccEEEecCCCCch---HHHHHhhcccCcEEEEEEc
Q psy7829 194 VEADAREGYLPEAPYDVIYYGGCVSEV---PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 194 ~~~d~~~~~~~~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~l~~~~~ 239 (511)
+++|+.+.. +.++||+|+++.+ ... .+.+.+. |||.+++...
T Consensus 88 ~~~d~~~~~-~~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 88 IKGRAEDVL-DKLEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp EESCHHHHG-GGCCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred EECCccccc-cCCCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEec
Confidence 999987633 3368999999887 433 3555565 9999999764
No 134
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.37 E-value=5.4e-12 Score=121.74 Aligned_cols=103 Identities=19% Similarity=0.221 Sum_probs=85.9
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC-CCCCcc
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL-PEAPYD 209 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD 209 (511)
+.++.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.|++++...+ ...+++++++|+..... ..++||
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~fD 135 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAG--IGEYYGVDIAEVSINDARVRARNMK----RRFKVFFRAQDSYGRHMDLGKEFD 135 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHT--CSEEEEEESCHHHHHHHHHHHHTSC----CSSEEEEEESCTTTSCCCCSSCEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhcC----CCccEEEEECCccccccCCCCCcC
Confidence 5788999999999999999988863 4589999999999999999988754 23579999999986443 457899
Q ss_pred EEEecCCCCc----------hHHHHHhhcccCcEEEEEEc
Q psy7829 210 VIYYGGCVSE----------VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 210 ~I~~~~~~~~----------~~~~~~~~LkpgG~l~~~~~ 239 (511)
+|++..++++ +++++.+.|||||.+++.+.
T Consensus 136 ~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 136 VISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp EEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 9999988754 23678999999999999764
No 135
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.37 E-value=9.8e-13 Score=121.88 Aligned_cols=103 Identities=21% Similarity=0.256 Sum_probs=85.0
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC----C--
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL----P-- 204 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~-- 204 (511)
..++.+|||+|||+|+.+..+++.+++.++|+++|+++.+++.|+++++..+ ..++++++.+|+.+... .
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g----~~~~i~~~~~d~~~~~~~~~~~~~ 142 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE----AEHKIDLRLKPALETLDELLAAGE 142 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT----CTTTEEEEESCHHHHHHHHHHTTC
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC----CCCeEEEEEcCHHHHHHHHHhcCC
Confidence 4578899999999999999999987547899999999999999999998865 34689999999854211 1
Q ss_pred CCCccEEEecCCCC---chHHHHHhhcccCcEEEEE
Q psy7829 205 EAPYDVIYYGGCVS---EVPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 205 ~~~fD~I~~~~~~~---~~~~~~~~~LkpgG~l~~~ 237 (511)
.++||+|+++.+.. .+.+.+.+.|+|||.+++.
T Consensus 143 ~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 143 AGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp TTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 16799999987754 3458899999999999873
No 136
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.37 E-value=2.8e-12 Score=119.15 Aligned_cols=102 Identities=29% Similarity=0.337 Sum_probs=84.2
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC---CCCCC
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY---LPEAP 207 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~ 207 (511)
+.++.+|||+|||+|.++..+++..++.++|+++|+++.+++.+.++++.+ .+++++++|+.+.. ...++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-------~~v~~~~~d~~~~~~~~~~~~~ 147 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-------TNIIPVIEDARHPHKYRMLIAM 147 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-------TTEEEECSCTTCGGGGGGGCCC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-------CCeEEEEcccCChhhhcccCCc
Confidence 567899999999999999999999867789999999999988888887662 47999999997631 13468
Q ss_pred ccEEEecCCCCc----hHHHHHhhcccCcEEEEEEc
Q psy7829 208 YDVIYYGGCVSE----VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 208 fD~I~~~~~~~~----~~~~~~~~LkpgG~l~~~~~ 239 (511)
||+|+++.+... +..++.+.|||||.+++.+.
T Consensus 148 ~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 148 VDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 999999876432 24678999999999999755
No 137
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.37 E-value=6.1e-13 Score=123.54 Aligned_cols=103 Identities=19% Similarity=0.324 Sum_probs=83.9
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC----CCC-
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY----LPE- 205 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~----~~~- 205 (511)
..++.+|||+|||+|+.+..+++.+++.++|+++|+++.+++.|++++...+ ..++++++.+|+.+.. ...
T Consensus 70 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g----~~~~i~~~~~d~~~~l~~l~~~~~ 145 (232)
T 3cbg_A 70 LTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG----VAEKISLRLGPALATLEQLTQGKP 145 (232)
T ss_dssp HHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT----CGGGEEEEESCHHHHHHHHHTSSS
T ss_pred hcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEEcCHHHHHHHHHhcCC
Confidence 3467899999999999999999987557899999999999999999998765 2357999999975321 112
Q ss_pred -CCccEEEecCCCCc---hHHHHHhhcccCcEEEEE
Q psy7829 206 -APYDVIYYGGCVSE---VPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 206 -~~fD~I~~~~~~~~---~~~~~~~~LkpgG~l~~~ 237 (511)
++||+|+++..... +.+.+.+.|+|||.+++.
T Consensus 146 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp CCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 68999999876443 357889999999999884
No 138
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.36 E-value=2.6e-12 Score=122.82 Aligned_cols=103 Identities=29% Similarity=0.443 Sum_probs=85.2
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCC
Q psy7829 122 DAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREG 201 (511)
Q Consensus 122 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 201 (511)
.+++.+. ..++.+|||+|||+|.++..+++ +..+|+|+|+|+.+++.++++. ++++++++|+...
T Consensus 48 ~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~ 112 (279)
T 3ccf_A 48 DLLQLLN--PQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY----------PHLHFDVADARNF 112 (279)
T ss_dssp HHHHHHC--CCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC----------TTSCEEECCTTTC
T ss_pred HHHHHhC--CCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC----------CCCEEEECChhhC
Confidence 3455554 66889999999999999999998 3568999999999999998874 2688999999874
Q ss_pred CCCCCCccEEEecCCCCch------HHHHHhhcccCcEEEEEEcc
Q psy7829 202 YLPEAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 202 ~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~~~ 240 (511)
.. .++||+|++..+++++ ++++.+.|||||++++.+..
T Consensus 113 ~~-~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 113 RV-DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp CC-SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred Cc-CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecC
Confidence 43 4789999999888654 47899999999999986553
No 139
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.36 E-value=4.1e-12 Score=119.05 Aligned_cols=108 Identities=13% Similarity=0.174 Sum_probs=85.0
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCc---CCCCCeEEEEccCCCCC---CC
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDL---LDSGRVRIVEADAREGY---LP 204 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~---~~~~~v~~~~~d~~~~~---~~ 204 (511)
+.++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.+++++..+.... .+.+|++++++|+.+.. ..
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcc
Confidence 4577899999999999999999986 67799999999999999999887640000 02358999999987632 23
Q ss_pred CCCccEEEecCCCC--------------chHHHHHhhcccCcEEEEEEc
Q psy7829 205 EAPYDVIYYGGCVS--------------EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 205 ~~~fD~I~~~~~~~--------------~~~~~~~~~LkpgG~l~~~~~ 239 (511)
.+.+|.|++..+-. .+..++.+.|||||.|++...
T Consensus 126 ~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 126 KGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp TTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 57899998765544 466889999999999998543
No 140
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.35 E-value=1.7e-12 Score=125.08 Aligned_cols=152 Identities=14% Similarity=0.131 Sum_probs=103.7
Q ss_pred CCCCCcccCCCccHHHHHHHHHHcCCCCCH--HHHHHHHhCCCCCccC------------------CCCCCCcccccCCC
Q psy7829 52 PDNLNHFKNEGTCQTDLVNHLRDIGKIRTE--RVAQAFYKVDRGNFAN------------------EEPYQDVSASLGYA 111 (511)
Q Consensus 52 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~~~~a~~~~~r~~~~~------------------~~~y~~~~~~~~~~ 111 (511)
++..+++|+...+..++.+.|...|+...+ -....++......|.. ...|..+.+.++..
T Consensus 10 ~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~G~~~~Qd~ 89 (309)
T 2b9e_A 10 LPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQDR 89 (309)
T ss_dssp CCEEEEECTTTCCHHHHHHHHHHTTCEEEEECSSHHHHHTCCTTEEEECSSSTTEEEECTTCCCTTSHHHHTTSEEECCT
T ss_pred CCeEEEEeCCCCCHHHHHHHHHhCCCeeeeccccccccccccccccccccCCCceEEeCCCCCcccChHHHCCeEEEECH
Confidence 456788999999999999999988752111 1122333222111110 01222222333222
Q ss_pred cccchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCe
Q psy7829 112 GVMNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRV 191 (511)
Q Consensus 112 ~~~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v 191 (511)
.++ + +...+. ++++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.+++|++++| ..++
T Consensus 90 ~s~----l---~~~~l~--~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g-----~~~v 155 (309)
T 2b9e_A 90 ASC----L---PAMLLD--PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG-----VSCC 155 (309)
T ss_dssp GGG----H---HHHHHC--CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT-----CCSE
T ss_pred HHH----H---HHHHhC--CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-----CCeE
Confidence 222 1 233443 7789999999999999999999988667899999999999999999999864 5689
Q ss_pred EEEEccCCCCCCC---CCCccEEEecCCC
Q psy7829 192 RIVEADAREGYLP---EAPYDVIYYGGCV 217 (511)
Q Consensus 192 ~~~~~d~~~~~~~---~~~fD~I~~~~~~ 217 (511)
+++++|+.+.... ..+||.|+++.++
T Consensus 156 ~~~~~D~~~~~~~~~~~~~fD~Vl~D~Pc 184 (309)
T 2b9e_A 156 ELAEEDFLAVSPSDPRYHEVHYILLDPSC 184 (309)
T ss_dssp EEEECCGGGSCTTCGGGTTEEEEEECCCC
T ss_pred EEEeCChHhcCccccccCCCCEEEEcCCc
Confidence 9999998764322 1579999998776
No 141
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.35 E-value=4.3e-12 Score=116.62 Aligned_cols=112 Identities=15% Similarity=0.070 Sum_probs=83.0
Q ss_pred HHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC
Q psy7829 123 AAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY 202 (511)
Q Consensus 123 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 202 (511)
.++.+. ..++.+|||+|||+|.++..+++.. |..+|+|+|+|+.+++.+.+++.+.-. ....++++++++|+.+..
T Consensus 19 ~~~~l~--~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~-~~~~~~v~~~~~d~~~l~ 94 (218)
T 3mq2_A 19 EFEQLR--SQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPA-KGGLPNLLYLWATAERLP 94 (218)
T ss_dssp HHHHHH--TTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGG-GTCCTTEEEEECCSTTCC
T ss_pred HHHHhh--ccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhh-hcCCCceEEEecchhhCC
Confidence 455555 6788999999999999999999985 778999999999988864443322100 013568999999998754
Q ss_pred CCCCCccEEEecCCC-----------CchHHHHHhhcccCcEEEEEEc
Q psy7829 203 LPEAPYDVIYYGGCV-----------SEVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 203 ~~~~~fD~I~~~~~~-----------~~~~~~~~~~LkpgG~l~~~~~ 239 (511)
...+. |.|++..+. ..+++++.++|||||.+++.+.
T Consensus 95 ~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 95 PLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp SCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 44455 777644322 3456899999999999999654
No 142
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.35 E-value=4.4e-12 Score=118.49 Aligned_cols=100 Identities=25% Similarity=0.364 Sum_probs=82.3
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCcc
Q psy7829 130 HLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYD 209 (511)
Q Consensus 130 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 209 (511)
.++++.+|||+|||+|.++..+++. .+++++|+|+.+++.|++++... ..+++++++|+.+...+ ++||
T Consensus 30 ~~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~d~~~~~~~-~~fD 98 (243)
T 3d2l_A 30 QVEPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMET------NRHVDFWVQDMRELELP-EPVD 98 (243)
T ss_dssp HSCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHT------TCCCEEEECCGGGCCCS-SCEE
T ss_pred HcCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhc------CCceEEEEcChhhcCCC-CCcC
Confidence 4567899999999999999988876 47999999999999999998764 24799999998765433 7899
Q ss_pred EEEecC-CCCch---------HHHHHhhcccCcEEEEEEcc
Q psy7829 210 VIYYGG-CVSEV---------PSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 210 ~I~~~~-~~~~~---------~~~~~~~LkpgG~l~~~~~~ 240 (511)
+|++.. +++++ .+++.+.|||||.+++.+..
T Consensus 99 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 99 AITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 999875 55443 36788999999999987653
No 143
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.35 E-value=3.5e-12 Score=116.52 Aligned_cols=96 Identities=27% Similarity=0.397 Sum_probs=80.8
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCcc
Q psy7829 130 HLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYD 209 (511)
Q Consensus 130 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 209 (511)
.+.++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.+++++ ++.++.+|+.... ..++||
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~d~~~~~-~~~~fD 104 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL-----------GRPVRTMLFHQLD-AIDAYD 104 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH-----------TSCCEECCGGGCC-CCSCEE
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc-----------CCceEEeeeccCC-CCCcEE
Confidence 4668899999999999999999987 347999999999999999886 2567788887654 568899
Q ss_pred EEEecCCCCchH--------HHHHhhcccCcEEEEEEcc
Q psy7829 210 VIYYGGCVSEVP--------SRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 210 ~I~~~~~~~~~~--------~~~~~~LkpgG~l~~~~~~ 240 (511)
+|++..+++++. +++.+.|||||.+++.+..
T Consensus 105 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 105 AVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp EEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 999998886553 6889999999999997654
No 144
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.35 E-value=1.8e-12 Score=121.12 Aligned_cols=100 Identities=16% Similarity=0.139 Sum_probs=83.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEEE
Q psy7829 133 DGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVIY 212 (511)
Q Consensus 133 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~ 212 (511)
++.+|||+|||+|.++..+++.. ..+|+++|+++.+++.|++++...+ ..+++++.+|+.......++||+|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v~ 151 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEG-----KRVRNYFCCGLQDFTPEPDSYDVIW 151 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGG-----GGEEEEEECCGGGCCCCSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcC-----CceEEEEEcChhhcCCCCCCEEEEE
Confidence 58899999999999999988875 4589999999999999999987642 3468999999876555556899999
Q ss_pred ecCCCCch--------HHHHHhhcccCcEEEEEEc
Q psy7829 213 YGGCVSEV--------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 213 ~~~~~~~~--------~~~~~~~LkpgG~l~~~~~ 239 (511)
+...++++ ++++.+.|||||++++...
T Consensus 152 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 152 IQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 99887544 4678899999999998654
No 145
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.35 E-value=3.5e-12 Score=119.13 Aligned_cols=105 Identities=20% Similarity=0.263 Sum_probs=85.2
Q ss_pred HHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC
Q psy7829 123 AAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY 202 (511)
Q Consensus 123 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 202 (511)
+...+. ..++.+|||+|||+|.++..+++.. . .+++++|+++.+++.++++... .+++++++|+....
T Consensus 35 l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~~ 102 (243)
T 3bkw_A 35 LRAMLP--EVGGLRIVDLGCGFGWFCRWAHEHG-A-SYVLGLDLSEKMLARARAAGPD--------TGITYERADLDKLH 102 (243)
T ss_dssp HHHHSC--CCTTCEEEEETCTTCHHHHHHHHTT-C-SEEEEEESCHHHHHHHHHTSCS--------SSEEEEECCGGGCC
T ss_pred HHHhcc--ccCCCEEEEEcCcCCHHHHHHHHCC-C-CeEEEEcCCHHHHHHHHHhccc--------CCceEEEcChhhcc
Confidence 444443 4578899999999999999998873 2 3899999999999999987543 36999999998654
Q ss_pred CCCCCccEEEecCCCCch------HHHHHhhcccCcEEEEEEc
Q psy7829 203 LPEAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 203 ~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~~ 239 (511)
.+.++||+|++..+++++ ++++.+.|||||.+++.+.
T Consensus 103 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 103 LPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 445789999999887654 4788999999999999764
No 146
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.34 E-value=2.4e-12 Score=121.80 Aligned_cols=107 Identities=17% Similarity=0.156 Sum_probs=86.4
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEE
Q psy7829 116 APNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVE 195 (511)
Q Consensus 116 ~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 195 (511)
.+.+...+++.+. ..++.+|||+|||+|.++..+++ +..+|+|+|+|+.+++.++++ .++++++
T Consensus 19 ~~~~~~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~-----------~~~~~~~ 82 (261)
T 3ege_A 19 DIRIVNAIINLLN--LPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVH-----------PQVEWFT 82 (261)
T ss_dssp CHHHHHHHHHHHC--CCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCC-----------TTEEEEC
T ss_pred cHHHHHHHHHHhC--CCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhc-----------cCCEEEE
Confidence 3456666777775 67889999999999999999987 356899999999998876543 1799999
Q ss_pred ccCCCCCCCCCCccEEEecCCCCch------HHHHHhhcccCcEEEEEEc
Q psy7829 196 ADAREGYLPEAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 196 ~d~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~~ 239 (511)
+|+.+...+.++||+|++..+++++ .+++.+.|| ||++++...
T Consensus 83 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 83 GYAENLALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp CCTTSCCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred CchhhCCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 9998755556899999999888654 478999999 997777543
No 147
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.34 E-value=5.7e-12 Score=115.11 Aligned_cols=103 Identities=22% Similarity=0.300 Sum_probs=82.4
Q ss_pred HHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC
Q psy7829 124 AENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL 203 (511)
Q Consensus 124 ~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 203 (511)
.+.+.....++.+|||+|||+|..+..+ ...+++++|+|+.+++.++++. ++++++++|+.+...
T Consensus 27 ~~~l~~~~~~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~ 91 (211)
T 2gs9_A 27 ERALKGLLPPGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA----------PEATWVRAWGEALPF 91 (211)
T ss_dssp HHHHHTTCCCCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC----------TTSEEECCCTTSCCS
T ss_pred HHHHHHhcCCCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC----------CCcEEEEcccccCCC
Confidence 3344434458889999999999998876 1237999999999999999875 268999999887554
Q ss_pred CCCCccEEEecCCCCch------HHHHHhhcccCcEEEEEEccC
Q psy7829 204 PEAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 204 ~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~~~~ 241 (511)
+.++||+|++..+++++ .+++.+.|||||.+++.+...
T Consensus 92 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 92 PGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp CSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 55789999999888765 378899999999999976543
No 148
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.34 E-value=7.2e-12 Score=131.53 Aligned_cols=117 Identities=12% Similarity=0.145 Sum_probs=91.6
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCC-CcCCCCCeEEEEccC
Q psy7829 120 IADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNK-DLLDSGRVRIVEADA 198 (511)
Q Consensus 120 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~-~~~~~~~v~~~~~d~ 198 (511)
...+++.+. ..++.+|||+|||+|.++..+++..++..+|+|+|+|+.+++.|++++..... ...+..+++|+++|+
T Consensus 710 le~LLelL~--~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 710 VEYALKHIR--ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp HHHHHHHHH--HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred HHHHHHHhc--ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 444555555 45789999999999999999999864557899999999999999997653210 001345899999999
Q ss_pred CCCCCCCCCccEEEecCCCCchH--------HHHHhhcccCcEEEEEEc
Q psy7829 199 REGYLPEAPYDVIYYGGCVSEVP--------SRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 199 ~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~l~~~~~ 239 (511)
.+.....++||+|++..+++++. +++.++|||| .+++.+.
T Consensus 788 ~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 788 LEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp TSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred HhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 87666668899999999987764 5679999999 7777654
No 149
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.34 E-value=7.2e-12 Score=119.07 Aligned_cols=108 Identities=21% Similarity=0.284 Sum_probs=86.5
Q ss_pred HHHHHhhcC-CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCC
Q psy7829 123 AAENLKLHL-VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREG 201 (511)
Q Consensus 123 ~~~~l~~~~-~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 201 (511)
+.+.+...+ .++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|+++. .++.+..+|+...
T Consensus 74 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~~ 142 (269)
T 1p91_A 74 IVAQLRERLDDKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY----------PQVTFCVASSHRL 142 (269)
T ss_dssp HHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC----------TTSEEEECCTTSC
T ss_pred HHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC----------CCcEEEEcchhhC
Confidence 344443333 578899999999999999999986 5678999999999999998863 2588999998765
Q ss_pred CCCCCCccEEEecCCCCchHHHHHhhcccCcEEEEEEccCC
Q psy7829 202 YLPEAPYDVIYYGGCVSEVPSRVLNQLKKGGRILAPIGPMD 242 (511)
Q Consensus 202 ~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~l~~~~~~~~ 242 (511)
....++||+|++..+. ...+++.++|||||.+++......
T Consensus 143 ~~~~~~fD~v~~~~~~-~~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 143 PFSDTSMDAIIRIYAP-CKAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp SBCTTCEEEEEEESCC-CCHHHHHHHEEEEEEEEEEEECTT
T ss_pred CCCCCceeEEEEeCCh-hhHHHHHHhcCCCcEEEEEEcCHH
Confidence 4455789999987664 456899999999999999765443
No 150
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.33 E-value=1.6e-12 Score=122.17 Aligned_cols=101 Identities=20% Similarity=0.197 Sum_probs=79.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHH--hCCCceEEEEeCCHHHHHHHHHHHhcc---CCCcCCCCC-----------------
Q psy7829 133 DGAKVLDLGSGSGYQTCVFAHM--VGPTGKVIGVEHIPELIEASLRNISKG---NKDLLDSGR----------------- 190 (511)
Q Consensus 133 ~~~~vLDiG~G~G~~~~~la~~--~~~~~~v~~iD~~~~~~~~a~~~~~~~---~~~~~~~~~----------------- 190 (511)
++.+|||+|||+|.++..+++. . +..+|+|+|+|+.+++.|++++... +. ..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~-~~~~v~gvDis~~~l~~A~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 125 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRR-SLRQVIASDVDPAPLELAAKNLALLSPAGL----TARELERREQSERFGKPSYL 125 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGG-GEEEEEEEESCHHHHHHHHHHHHTTSHHHH----HHHHHHHHHHHHHHCCHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhcc-CCCeEEEEECCHHHHHHHHHHHHHhhhccc----cccchhhhhhhhhcccccch
Confidence 5679999999999999999987 4 4568999999999999999988763 20 011
Q ss_pred --------eE-------------EEEccCCCCCC-----CCCCccEEEecCCCC---------------chHHHHHhhcc
Q psy7829 191 --------VR-------------IVEADAREGYL-----PEAPYDVIYYGGCVS---------------EVPSRVLNQLK 229 (511)
Q Consensus 191 --------v~-------------~~~~d~~~~~~-----~~~~fD~I~~~~~~~---------------~~~~~~~~~Lk 229 (511)
++ ++++|+.+... ...+||+|+++.++. .+.+++.+.||
T Consensus 126 ~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 205 (250)
T 1o9g_A 126 EAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALP 205 (250)
T ss_dssp HHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSC
T ss_pred hhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcC
Confidence 56 99999876442 334899999987642 34578899999
Q ss_pred cCcEEEEEEc
Q psy7829 230 KGGRILAPIG 239 (511)
Q Consensus 230 pgG~l~~~~~ 239 (511)
|||++++ +.
T Consensus 206 pgG~l~~-~~ 214 (250)
T 1o9g_A 206 AHAVIAV-TD 214 (250)
T ss_dssp TTCEEEE-EE
T ss_pred CCcEEEE-eC
Confidence 9999998 44
No 151
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.33 E-value=6e-12 Score=117.71 Aligned_cols=112 Identities=18% Similarity=0.140 Sum_probs=89.6
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccC
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADA 198 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 198 (511)
....+.+.+.....++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++++...+ .+++++++|+
T Consensus 23 ~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~s~~~~~~a~~~~~~~~------~~~~~~~~d~ 93 (246)
T 1y8c_A 23 WSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKF---KNTWAVDLSQEMLSEAENKFRSQG------LKPRLACQDI 93 (246)
T ss_dssp HHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGS---SEEEEECSCHHHHHHHHHHHHHTT------CCCEEECCCG
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCC---CcEEEEECCHHHHHHHHHHHhhcC------CCeEEEeccc
Confidence 4445566665333478899999999999999998873 479999999999999999987743 2799999998
Q ss_pred CCCCCCCCCccEEEecC-CCCch---------HHHHHhhcccCcEEEEEEcc
Q psy7829 199 REGYLPEAPYDVIYYGG-CVSEV---------PSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 199 ~~~~~~~~~fD~I~~~~-~~~~~---------~~~~~~~LkpgG~l~~~~~~ 240 (511)
.+...+ ++||+|++.. +++++ ++++.+.|||||.+++.+..
T Consensus 94 ~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 94 SNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp GGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred ccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 865444 7899999987 77665 26788999999999997653
No 152
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.33 E-value=1.1e-11 Score=112.35 Aligned_cols=102 Identities=18% Similarity=0.244 Sum_probs=82.5
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
++++ +|||+|||+|..+..+++. ..+|+++|+++.+++.|++++...+ .+++++++|+.....+.++||+
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~~~~~~fD~ 97 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKG------VKITTVQSNLADFDIVADAWEG 97 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHT------CCEEEECCBTTTBSCCTTTCSE
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcC------CceEEEEcChhhcCCCcCCccE
Confidence 5567 9999999999999999886 2489999999999999999988753 2799999998865444578999
Q ss_pred EEecCCCC------chHHHHHhhcccCcEEEEEEccCC
Q psy7829 211 IYYGGCVS------EVPSRVLNQLKKGGRILAPIGPMD 242 (511)
Q Consensus 211 I~~~~~~~------~~~~~~~~~LkpgG~l~~~~~~~~ 242 (511)
|++..... .+++++.+.|||||.+++......
T Consensus 98 v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 98 IVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp EEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred EEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 99864322 234788999999999999766443
No 153
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.33 E-value=2.6e-12 Score=118.49 Aligned_cols=102 Identities=23% Similarity=0.150 Sum_probs=79.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCC-HHHHHHH---HHHHhccCCCcCCCCCeEEEEccCCCCCCC-C
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHI-PELIEAS---LRNISKGNKDLLDSGRVRIVEADAREGYLP-E 205 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~-~~~~~~a---~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 205 (511)
.+++.+|||||||+|.++..+++.. +..+|+|+|+| +.+++.| ++++... +.+++.++++|+...+.. .
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~-----~~~~v~~~~~d~~~l~~~~~ 95 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKG-----GLSNVVFVIAAAESLPFELK 95 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGT-----CCSSEEEECCBTTBCCGGGT
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHc-----CCCCeEEEEcCHHHhhhhcc
Confidence 4688899999999999999999764 67899999999 7777766 7766654 356899999999865321 2
Q ss_pred CCccEEEecCCCC-----------chHHHHHhhcccCcEEEEEE
Q psy7829 206 APYDVIYYGGCVS-----------EVPSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 206 ~~fD~I~~~~~~~-----------~~~~~~~~~LkpgG~l~~~~ 238 (511)
+.+|.|+++.+.. .+++++.++|||||++++.+
T Consensus 96 d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 96 NIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp TCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred CeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 5677777765542 24578999999999999944
No 154
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.32 E-value=4.4e-12 Score=121.39 Aligned_cols=107 Identities=19% Similarity=0.164 Sum_probs=82.6
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC-CCCCccE
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL-PEAPYDV 210 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~ 210 (511)
.++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++...+.+.+..++++++.+|+.+... ..++||+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 457899999999999999999874 56789999999999999999987532111134689999999876443 3478999
Q ss_pred EEecCCCC----------chHHHHHhhcccCcEEEEEEc
Q psy7829 211 IYYGGCVS----------EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 211 I~~~~~~~----------~~~~~~~~~LkpgG~l~~~~~ 239 (511)
|+++...+ .+.+.+.+.|||||++++..+
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 99976542 245789999999999998654
No 155
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.32 E-value=2e-12 Score=130.55 Aligned_cols=103 Identities=21% Similarity=0.232 Sum_probs=86.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC-CCCCcc
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL-PEAPYD 209 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD 209 (511)
..++.+|||+|||+|..+..++..++..++|+++|+++.+++.+++|++++| ..++.++++|+..... ..++||
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g-----~~nv~v~~~Da~~l~~~~~~~FD 177 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG-----VSNAIVTNHAPAELVPHFSGFFD 177 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT-----CSSEEEECCCHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC-----CCceEEEeCCHHHhhhhccccCC
Confidence 6789999999999999999999988667899999999999999999999875 5689999999864321 237899
Q ss_pred EEEecCCCC----------------------------chHHHHHhhcccCcEEEEEE
Q psy7829 210 VIYYGGCVS----------------------------EVPSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 210 ~I~~~~~~~----------------------------~~~~~~~~~LkpgG~l~~~~ 238 (511)
+|+++++|. .++..+.+.|||||+|++++
T Consensus 178 ~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 178 RIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp EEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999998862 23467788999999999864
No 156
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.31 E-value=3.7e-12 Score=119.82 Aligned_cols=107 Identities=28% Similarity=0.391 Sum_probs=86.0
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCC
Q psy7829 121 ADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADARE 200 (511)
Q Consensus 121 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 200 (511)
..+++.+...+.++.+|||+|||+|.++..+++.. + +|+++|+++.+++.|++++..++ .. +++.++|+..
T Consensus 108 ~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g-~--~v~gvDi~~~~v~~a~~n~~~~~-----~~-v~~~~~d~~~ 178 (254)
T 2nxc_A 108 RLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLG-G--KALGVDIDPMVLPQAEANAKRNG-----VR-PRFLEGSLEA 178 (254)
T ss_dssp HHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTT-C--EEEEEESCGGGHHHHHHHHHHTT-----CC-CEEEESCHHH
T ss_pred HHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhC-C--eEEEEECCHHHHHHHHHHHHHcC-----Cc-EEEEECChhh
Confidence 34455555446789999999999999999988863 4 89999999999999999998864 23 8999999865
Q ss_pred CCCCCCCccEEEecCCCCc---hHHHHHhhcccCcEEEEE
Q psy7829 201 GYLPEAPYDVIYYGGCVSE---VPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 201 ~~~~~~~fD~I~~~~~~~~---~~~~~~~~LkpgG~l~~~ 237 (511)
.. +.++||+|+++...+. +...+.+.|||||++++.
T Consensus 179 ~~-~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils 217 (254)
T 2nxc_A 179 AL-PFGPFDLLVANLYAELHAALAPRYREALVPGGRALLT 217 (254)
T ss_dssp HG-GGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cC-cCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 33 2468999999865543 447889999999999985
No 157
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.31 E-value=5.5e-13 Score=124.64 Aligned_cols=109 Identities=16% Similarity=0.054 Sum_probs=86.7
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCC
Q psy7829 120 IADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAR 199 (511)
Q Consensus 120 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 199 (511)
...+...+.. ..++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.|++++..++ ..++++++++|+.
T Consensus 66 ~~~l~~~~~~-~~~~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~~d~~ 137 (241)
T 3gdh_A 66 AEHIAGRVSQ-SFKCDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYG----IADKIEFICGDFL 137 (241)
T ss_dssp HHHHHHHHHH-HSCCSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT----CGGGEEEEESCHH
T ss_pred HHHHHHHhhh-ccCCCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcC----CCcCeEEEECChH
Confidence 4444444431 3478999999999999999999863 579999999999999999998864 2258999999987
Q ss_pred CCCCCCCCccEEEecCCCCchH------HHHHhhcccCcEEEEE
Q psy7829 200 EGYLPEAPYDVIYYGGCVSEVP------SRVLNQLKKGGRILAP 237 (511)
Q Consensus 200 ~~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~l~~~ 237 (511)
+.. ..++||+|+++.++++.. .++.+.|+|||.+++.
T Consensus 138 ~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 138 LLA-SFLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp HHG-GGCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred Hhc-ccCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 644 347899999999887653 3478899999997764
No 158
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.30 E-value=4.1e-12 Score=118.62 Aligned_cols=95 Identities=22% Similarity=0.228 Sum_probs=77.4
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCC--CCCCCC
Q psy7829 130 HLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREG--YLPEAP 207 (511)
Q Consensus 130 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~ 207 (511)
.++++.+|||||||+|.++..+++.. .+|+|+|+|+.+++.++++ ++++.+|+.+. ..+.++
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~-------------~~~~~~d~~~~~~~~~~~~ 101 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEEG---IESIGVDINEDMIKFCEGK-------------FNVVKSDAIEYLKSLPDKY 101 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHHT---CCEEEECSCHHHHHHHHTT-------------SEEECSCHHHHHHTSCTTC
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhCC---CcEEEEECCHHHHHHHHhh-------------cceeeccHHHHhhhcCCCC
Confidence 35678999999999999999998873 3699999999999988754 57888887652 224588
Q ss_pred ccEEEecCCCCch--------HHHHHhhcccCcEEEEEEcc
Q psy7829 208 YDVIYYGGCVSEV--------PSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 208 fD~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~~~~ 240 (511)
||+|++..+++++ .+++.+.|||||.+++.+..
T Consensus 102 fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 102 LDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp BSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred eeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 9999999887654 36889999999999997654
No 159
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.29 E-value=8.4e-12 Score=120.57 Aligned_cols=114 Identities=19% Similarity=0.289 Sum_probs=86.3
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccC
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADA 198 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 198 (511)
....+++.+. .++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.|++++...+.. ...+++++++|+
T Consensus 71 ~~~~~~~~~~---~~~~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~~v~~~~~d~ 142 (299)
T 3g2m_A 71 EAREFATRTG---PVSGPVLELAAGMGRLTFPFLDLG---WEVTALELSTSVLAAFRKRLAEAPAD--VRDRCTLVQGDM 142 (299)
T ss_dssp HHHHHHHHHC---CCCSCEEEETCTTTTTHHHHHTTT---CCEEEEESCHHHHHHHHHHHHTSCHH--HHTTEEEEECBT
T ss_pred HHHHHHHhhC---CCCCcEEEEeccCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHhhcccc--cccceEEEeCch
Confidence 4445555553 344599999999999999999873 46999999999999999998874200 015799999999
Q ss_pred CCCCCCCCCccEEEec-CCCC--------chHHHHHhhcccCcEEEEEEccC
Q psy7829 199 REGYLPEAPYDVIYYG-GCVS--------EVPSRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 199 ~~~~~~~~~fD~I~~~-~~~~--------~~~~~~~~~LkpgG~l~~~~~~~ 241 (511)
.+... .++||+|++. ..++ .+++++.+.|||||.|++.+...
T Consensus 143 ~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 143 SAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp TBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred hcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 87544 5889998864 3332 23478999999999999976543
No 160
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.29 E-value=5.8e-12 Score=110.82 Aligned_cols=99 Identities=16% Similarity=0.234 Sum_probs=81.9
Q ss_pred HHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC
Q psy7829 123 AAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY 202 (511)
Q Consensus 123 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 202 (511)
+++.+. +.++.+|||+|||+|.++..+++.. . +++++|+++.+++.++++. ++++++.+| . .
T Consensus 9 ~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~----------~~v~~~~~d--~-~ 70 (170)
T 3i9f_A 9 YLPNIF--EGKKGVIVDYGCGNGFYCKYLLEFA-T--KLYCIDINVIALKEVKEKF----------DSVITLSDP--K-E 70 (170)
T ss_dssp THHHHH--SSCCEEEEEETCTTCTTHHHHHTTE-E--EEEEECSCHHHHHHHHHHC----------TTSEEESSG--G-G
T ss_pred HHHhcC--cCCCCeEEEECCCCCHHHHHHHhhc-C--eEEEEeCCHHHHHHHHHhC----------CCcEEEeCC--C-C
Confidence 344554 6788899999999999999999886 2 7999999999999999871 268999999 2 2
Q ss_pred CCCCCccEEEecCCCCch------HHHHHhhcccCcEEEEEEc
Q psy7829 203 LPEAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 203 ~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~~ 239 (511)
...++||+|++..+++++ .+++.+.|||||.+++...
T Consensus 71 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 71 IPDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDW 113 (170)
T ss_dssp SCTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 245789999999988765 4789999999999998643
No 161
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.29 E-value=1.9e-11 Score=114.88 Aligned_cols=98 Identities=22% Similarity=0.323 Sum_probs=79.6
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEE
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVI 211 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I 211 (511)
+++.+|||+|||+|..+..+++. ..+|+++|+|+.+++.|++++...+ .+++++++|+.+... .++||+|
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~------~~v~~~~~d~~~~~~-~~~fD~v 109 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERN------LKIEFLQGDVLEIAF-KNEFDAV 109 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTT------CCCEEEESCGGGCCC-CSCEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcC------CceEEEECChhhccc-CCCccEE
Confidence 56789999999999999999986 3479999999999999999987743 279999999986443 3689999
Q ss_pred EecCCC-C--------chHHHHHhhcccCcEEEEEEc
Q psy7829 212 YYGGCV-S--------EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 212 ~~~~~~-~--------~~~~~~~~~LkpgG~l~~~~~ 239 (511)
++.... . .+++++.+.|||||.+++.+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 110 TMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp EECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 975322 1 234778999999999998654
No 162
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.29 E-value=4.8e-12 Score=121.89 Aligned_cols=115 Identities=15% Similarity=0.133 Sum_probs=87.1
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccC
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADA 198 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 198 (511)
....+.+.+. ..++.+|||+|||+|..+..+++.. . +|+|+|+|+.+++.|+++....+.. ....++.+..+|+
T Consensus 45 ~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~gvD~s~~~l~~a~~~~~~~~~~-~~~~~~~~~~~d~ 118 (293)
T 3thr_A 45 YKAWLLGLLR--QHGCHRVLDVACGTGVDSIMLVEEG-F--SVTSVDASDKMLKYALKERWNRRKE-PAFDKWVIEEANW 118 (293)
T ss_dssp HHHHHHHHHH--HTTCCEEEETTCTTSHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHTTTS-HHHHTCEEEECCG
T ss_pred HHHHHHHHhc--ccCCCEEEEecCCCCHHHHHHHHCC-C--eEEEEECCHHHHHHHHHhhhhcccc-cccceeeEeecCh
Confidence 4455556665 4578899999999999999999873 3 8999999999999999887442210 0124688999998
Q ss_pred CCCC---CCCCCccEEEec-CCCCc-------------hHHHHHhhcccCcEEEEEEc
Q psy7829 199 REGY---LPEAPYDVIYYG-GCVSE-------------VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 199 ~~~~---~~~~~fD~I~~~-~~~~~-------------~~~~~~~~LkpgG~l~~~~~ 239 (511)
.... ...++||+|++. .++++ +++++.+.|||||++++.+.
T Consensus 119 ~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 119 LTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp GGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 7533 345789999997 55533 34689999999999998764
No 163
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.29 E-value=1.1e-11 Score=116.96 Aligned_cols=101 Identities=25% Similarity=0.193 Sum_probs=86.0
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCcc
Q psy7829 130 HLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYD 209 (511)
Q Consensus 130 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 209 (511)
..++|.+|||+|||+|.+++.+|+.. ..+|+++|+++.+++.+++|++.++ ..++++++++|+.+.. ..+.||
T Consensus 122 ~~~~g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~----v~~~v~~~~~D~~~~~-~~~~~D 194 (278)
T 3k6r_A 122 VAKPDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNK----VEDRMSAYNMDNRDFP-GENIAD 194 (278)
T ss_dssp HCCTTCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTT----CTTTEEEECSCTTTCC-CCSCEE
T ss_pred hcCCCCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEeCcHHHhc-cccCCC
Confidence 36789999999999999999999874 4689999999999999999999986 4567999999998744 357899
Q ss_pred EEEecCCCC--chHHHHHhhcccCcEEEEE
Q psy7829 210 VIYYGGCVS--EVPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 210 ~I~~~~~~~--~~~~~~~~~LkpgG~l~~~ 237 (511)
.|+++.+.. .++..+.+.|||||.+.+.
T Consensus 195 ~Vi~~~p~~~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 195 RILMGYVVRTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp EEEECCCSSGGGGHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCcHHHHHHHHHHHcCCCCEEEEE
Confidence 999987653 4567889999999998763
No 164
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.29 E-value=1.1e-11 Score=113.56 Aligned_cols=134 Identities=16% Similarity=0.248 Sum_probs=91.0
Q ss_pred HHHHHHHHH-hhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-cccccccccccccc--
Q psy7829 358 RSIAHILDL-CYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-TNHIDLIANETIEI-- 433 (511)
Q Consensus 358 ~~~~~~~~~-~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-~~~v~~i~~d~~~~-- 433 (511)
+..+.++.- ..+.++||++|||+|||+|+++..+|+.+||+|+|+|+|+++++++.+.++.. ..|+..+.++....
T Consensus 61 klaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~ 140 (233)
T 4df3_A 61 KLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEK 140 (233)
T ss_dssp HHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGG
T ss_pred HHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccc
Confidence 455555432 23678999999999999999999999999999999999999999998887765 46777776653221
Q ss_pred ---ccccchhhhhcccCCcEEEEEcCC--ccHHHHHHHHHhCCCcEEEEh------------HHHHHHHHHHHHhcCCCc
Q psy7829 434 ---IPHILDLCYLNLHRGAKVLEIGSG--SGYLATLMAHLVGPTGHVTGL------------EHMMDIAIESIANISTNH 496 (511)
Q Consensus 434 ---l~~~~d~i~~~l~~~~~vLD~~~g--~g~~~~~l~~~l~~~g~v~~~------------~~ml~~a~~~~~~~~~~~ 496 (511)
....+|.++. |+..- .-.....+.+.|||+|+++.. ....+...+.+++.|+.-
T Consensus 141 ~~~~~~~vDvVf~---------d~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l 211 (233)
T 4df3_A 141 YRHLVEGVDGLYA---------DVAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEI 211 (233)
T ss_dssp GTTTCCCEEEEEE---------CCCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCE
T ss_pred cccccceEEEEEE---------eccCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEE
Confidence 1222333332 22221 112345567789999998764 234455666677777744
Q ss_pred eEEE
Q psy7829 497 IDLI 500 (511)
Q Consensus 497 i~~i 500 (511)
++.+
T Consensus 212 ~e~i 215 (233)
T 4df3_A 212 KDVV 215 (233)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 165
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.29 E-value=2.9e-11 Score=114.88 Aligned_cols=113 Identities=18% Similarity=0.160 Sum_probs=85.9
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCc---cHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEE
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGS---GYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVE 195 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~---G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 195 (511)
+...+++.+.. .....+|||||||+ |.++..+++.. +..+|+++|+|+.|++.|++++.. .+++++++
T Consensus 64 ~~~~~~~~l~~-~~~~~~vLDlGcG~pt~G~~~~~~~~~~-p~~~v~~vD~sp~~l~~Ar~~~~~-------~~~v~~~~ 134 (274)
T 2qe6_A 64 VLVRGVRFLAG-EAGISQFLDLGSGLPTVQNTHEVAQSVN-PDARVVYVDIDPMVLTHGRALLAK-------DPNTAVFT 134 (274)
T ss_dssp HHHHHHHHHHT-TTCCCEEEEETCCSCCSSCHHHHHHHHC-TTCEEEEEESSHHHHHHHHHHHTT-------CTTEEEEE
T ss_pred HHHHHHHHHhh-ccCCCEEEEECCCCCCCChHHHHHHHhC-CCCEEEEEECChHHHHHHHHhcCC-------CCCeEEEE
Confidence 34444555431 12347999999999 98887766664 778999999999999999998854 34799999
Q ss_pred ccCCCCC-----------CCCCCccEEEecCCCCch--------HHHHHhhcccCcEEEEEEcc
Q psy7829 196 ADAREGY-----------LPEAPYDVIYYGGCVSEV--------PSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 196 ~d~~~~~-----------~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~~~~ 240 (511)
+|+.+.. .+..+||+|++...++++ ++++.+.|||||+|++....
T Consensus 135 ~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 135 ADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp CCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred eeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 9987420 122479999999887654 36889999999999997654
No 166
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.29 E-value=9.4e-12 Score=122.16 Aligned_cols=98 Identities=23% Similarity=0.311 Sum_probs=80.0
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
..++.+|||+|||+|.++..+++.. ..+|+|+|+++ +++.|+++++.++ ..++++++.+|+.+...+.++||+
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g--~~~v~gvD~s~-~~~~a~~~~~~~~----~~~~i~~~~~d~~~~~~~~~~~D~ 134 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAG--AKKVLGVDQSE-ILYQAMDIIRLNK----LEDTITLIKGKIEEVHLPVEKVDV 134 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEESST-HHHHHHHHHHHTT----CTTTEEEEESCTTTSCCSCSCEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcC--CCEEEEEChHH-HHHHHHHHHHHcC----CCCcEEEEEeeHHHhcCCCCcEEE
Confidence 5678999999999999999999873 45899999996 9999999998865 346899999999875444578999
Q ss_pred EEecCC---CC------chHHHHHhhcccCcEEE
Q psy7829 211 IYYGGC---VS------EVPSRVLNQLKKGGRIL 235 (511)
Q Consensus 211 I~~~~~---~~------~~~~~~~~~LkpgG~l~ 235 (511)
|+++.. +. .++.++.+.|||||.++
T Consensus 135 Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 135 IISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 998762 21 23466789999999987
No 167
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.29 E-value=7.4e-12 Score=123.25 Aligned_cols=109 Identities=17% Similarity=0.231 Sum_probs=88.2
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCC
Q psy7829 120 IADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAR 199 (511)
Q Consensus 120 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 199 (511)
...+++.+. ..++.+|||+|||+|.++..+++.. +..+|+++|+|+.+++.+++++..++ .+++++.+|+.
T Consensus 185 ~~~ll~~l~--~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~------~~~~~~~~d~~ 255 (343)
T 2pjd_A 185 SQLLLSTLT--PHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANG------VEGEVFASNVF 255 (343)
T ss_dssp HHHHHHHSC--TTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTT------CCCEEEECSTT
T ss_pred HHHHHHhcC--cCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhC------CCCEEEEcccc
Confidence 344555553 3457799999999999999999985 67799999999999999999998754 13678899987
Q ss_pred CCCCCCCCccEEEecCCCCc-----------hHHHHHhhcccCcEEEEEEc
Q psy7829 200 EGYLPEAPYDVIYYGGCVSE-----------VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 200 ~~~~~~~~fD~I~~~~~~~~-----------~~~~~~~~LkpgG~l~~~~~ 239 (511)
... .++||+|+++.+++. +.+++.+.|||||.+++...
T Consensus 256 ~~~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 256 SEV--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp TTC--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ccc--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 643 478999999998864 24778899999999999654
No 168
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.29 E-value=2.9e-12 Score=121.32 Aligned_cols=106 Identities=16% Similarity=0.169 Sum_probs=78.2
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCC-----------------------
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLD----------------------- 187 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~----------------------- 187 (511)
..++.+|||||||+|.++..++... ..+|+|+|+|+.|++.|+++++..... +.
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~~~~~~~-~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWLKKEPGA-YDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHHTCTTC-CCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHHhcCCCc-ccchHHHHHHHhcCCCCcchhhHHH
Confidence 4578899999999998877666542 247999999999999999887653100 00
Q ss_pred --CCCeE-EEEccCCCCCC----CCCCccEEEecCCCCch----------HHHHHhhcccCcEEEEEEc
Q psy7829 188 --SGRVR-IVEADAREGYL----PEAPYDVIYYGGCVSEV----------PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 188 --~~~v~-~~~~d~~~~~~----~~~~fD~I~~~~~~~~~----------~~~~~~~LkpgG~l~~~~~ 239 (511)
..++. ++++|+.+..+ ..++||+|++..+++++ ++++.++|||||.|++...
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 01244 89999886321 24689999999877653 3678899999999999743
No 169
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.29 E-value=1.9e-11 Score=121.31 Aligned_cols=282 Identities=12% Similarity=0.116 Sum_probs=150.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEEE
Q psy7829 133 DGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVIY 212 (511)
Q Consensus 133 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~ 212 (511)
.+.+||.++.+.|.++..++.. + ++.+.-|--.....+.|+..++. ...++++... .+. ....||+|+
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~-~----~~~~~ds~~~~~~~~~n~~~~~~---~~~~~~~~~~--~~~--~~~~~~~v~ 105 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH-K----PYSIGDSYISELATRENLRLNGI---DESSVKFLDS--TAD--YPQQPGVVL 105 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG-C----CEEEESCHHHHHHHHHHHHHTTC---CGGGSEEEET--TSC--CCSSCSEEE
T ss_pred CCCCEEEECCCCCHHHHhhccC-C----ceEEEhHHHHHHHHHHHHHHcCC---CccceEeccc--ccc--cccCCCEEE
Confidence 4568999999999999988754 2 45554466666677888888762 2334666533 222 236799998
Q ss_pred ecCCCC-----chHHHHHhhcccCcEEEEEEccCCCcce-EEEEEEecCCeEEEEeecceEEEecccccccccccccccC
Q psy7829 213 YGGCVS-----EVPSRVLNQLKKGGRILAPIGPMDDFQK-LTQIDRFHDNTLQKTDLFEVAYDAIMRKALQMDIHKFQMD 286 (511)
Q Consensus 213 ~~~~~~-----~~~~~~~~~LkpgG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 286 (511)
...+-. ..+..+...|+||+.+++.-........ ...+.+. .+.. . ..+.. .+.... +....
T Consensus 106 ~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~g~~~~~~~~~~~~l~~~-~~~~-~--------~~~a~-~~~~~~-~~~~~ 173 (375)
T 4dcm_A 106 IKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKV-LGPT-T--------TTLAW-KKARLI-NCTFN 173 (375)
T ss_dssp EECCSCHHHHHHHHHHHHTTCCTTSEEEEEEEGGGCCHHHHHHHHHH-TCCE-E--------ECCCB-TTEEEE-EECCC
T ss_pred EEcCCCHHHHHHHHHHHHhhCCCCCEEEEEecccchHHHHHHHHHhh-cCcc-c--------hhhhh-ceeEEE-EEeCC
Confidence 876643 2347788899999999663221111000 0000000 0000 0 00000 000000 00000
Q ss_pred ccccccccccccchhhHHHHhhhhhccCCCcccCccccCCCCCCCCCceeeeccccccccCCCCCCCCCCHHHHHHHHHH
Q psy7829 287 PVDENLFTLMDKDSDELFSERVWELKQDPLYTTEKWIPQPPGYTTPGEITTRDKYGRLVHGSAPDNGPSSERSIAHILDL 366 (511)
Q Consensus 287 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (511)
..... ..+ ....|...... .......+.+... ........++..
T Consensus 174 --~~~~~-------------------~~~--~~~~~~~~~~~------~~~~~~pg~Fs~~-------~~d~~~~~ll~~ 217 (375)
T 4dcm_A 174 --EPQLA-------------------DAP--QTVSWKLEGTD------WTIHNHANVFSRT-------GLDIGARFFMQH 217 (375)
T ss_dssp --CCCCC-------------------CCC--SCEEEEETTTT------EEEEECTTCTTCS-------SCCHHHHHHHHT
T ss_pred --CCCCC-------------------CCC--CceEEEecCCc------eEEEeCCCcccCC-------cccHHHHHHHHh
Confidence 00000 000 00011111000 0111111111111 112333345554
Q ss_pred hhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccc------cccccccccccccc-ccch
Q psy7829 367 CYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTN------HIDLIANETIEIIP-HILD 439 (511)
Q Consensus 367 ~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~------~v~~i~~d~~~~l~-~~~d 439 (511)
+...++.+|||+|||+|.+++.+++.. |..+|+++|+++.+++.+++|+..+ +++++.+|..+.++ ..+|
T Consensus 218 --l~~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD 294 (375)
T 4dcm_A 218 --LPENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN 294 (375)
T ss_dssp --CCCSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEE
T ss_pred --CcccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCee
Confidence 666778999999999999999999886 6689999999999998888776543 36667777665443 3577
Q ss_pred hhhhcccCCcEEEEEcCCc-cHHHHHHHHHhCCCcEEEEh
Q psy7829 440 LCYLNLHRGAKVLEIGSGS-GYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 440 ~i~~~l~~~~~vLD~~~g~-g~~~~~l~~~l~~~g~v~~~ 478 (511)
.++.+..-.. ..++.... -.+...+.+.|+|+|.++.+
T Consensus 295 ~Ii~nppfh~-~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 295 AVLCNPPFHQ-QHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp EEEECCCC--------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCccc-CcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 7776543221 01111111 12456777889999998886
No 170
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.28 E-value=1.6e-11 Score=108.06 Aligned_cols=106 Identities=17% Similarity=0.158 Sum_probs=80.5
Q ss_pred cchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEE
Q psy7829 114 MNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRI 193 (511)
Q Consensus 114 ~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 193 (511)
+++|.. ..+++.+.....++.+|||+|||+|.++..+++.. +|+|+|+|+.+++. . .++++
T Consensus 5 ~P~~~~-~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~------~--------~~~~~ 65 (170)
T 3q87_B 5 EPGEDT-YTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES------H--------RGGNL 65 (170)
T ss_dssp CCCHHH-HHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT------C--------SSSCE
T ss_pred CcCccH-HHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc------c--------cCCeE
Confidence 444433 33455554222567899999999999999998874 79999999999987 1 16889
Q ss_pred EEccCCCCCCCCCCccEEEecCCCCc---------------hHHHHHhhcccCcEEEEEEcc
Q psy7829 194 VEADAREGYLPEAPYDVIYYGGCVSE---------------VPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 194 ~~~d~~~~~~~~~~fD~I~~~~~~~~---------------~~~~~~~~LkpgG~l~~~~~~ 240 (511)
+++|+.+... .++||+|+++.++.+ +..++.+.| |||.+++....
T Consensus 66 ~~~d~~~~~~-~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 66 VRADLLCSIN-QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp EECSTTTTBC-GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred EECChhhhcc-cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 9999987443 378999999988752 346788888 99999987643
No 171
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.28 E-value=1e-11 Score=122.38 Aligned_cols=99 Identities=25% Similarity=0.270 Sum_probs=80.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
+.++.+|||+|||+|.++..+++. +..+|+|+|+| ++++.|+++++.++ ..++++++++|+.+...+.++||+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s-~~l~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~fD~ 136 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECS-SISDYAVKIVKANK----LDHVVTIIKGKVEEVELPVEKVDI 136 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECS-THHHHHHHHHHHTT----CTTTEEEEESCTTTCCCSSSCEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcH-HHHHHHHHHHHHcC----CCCcEEEEECcHHHccCCCCceEE
Confidence 457899999999999999999987 35689999999 59999999998875 345699999999876545588999
Q ss_pred EEecCCCC---------chHHHHHhhcccCcEEEE
Q psy7829 211 IYYGGCVS---------EVPSRVLNQLKKGGRILA 236 (511)
Q Consensus 211 I~~~~~~~---------~~~~~~~~~LkpgG~l~~ 236 (511)
|+++.+.. .+...+.++|||||.++.
T Consensus 137 Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 137 IISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp EEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 99975421 233677899999999983
No 172
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.28 E-value=9e-12 Score=116.61 Aligned_cols=99 Identities=18% Similarity=0.218 Sum_probs=80.5
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCC-----
Q psy7829 130 HLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLP----- 204 (511)
Q Consensus 130 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~----- 204 (511)
.+.++.+|||+|||+|..+..+++.. + +|+++|+|+.+++.+++++. ..+++++++|+.+....
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~-~--~v~gvD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~~~~~~~~~ 121 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFF-P--RVIGLDVSKSALEIAAKENT--------AANISYRLLDGLVPEQAAQIHS 121 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHS-S--CEEEEESCHHHHHHHHHHSC--------CTTEEEEECCTTCHHHHHHHHH
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhC-C--CEEEEECCHHHHHHHHHhCc--------ccCceEEECccccccccccccc
Confidence 46788999999999999999999986 3 69999999999999999863 23799999998753211
Q ss_pred CCCccEEEecCCCCchH--------HHHHhhcccCcEEEEEEc
Q psy7829 205 EAPYDVIYYGGCVSEVP--------SRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 205 ~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~l~~~~~ 239 (511)
...||+|+++..++++. +++.+.|||||++++...
T Consensus 122 ~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 122 EIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred ccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 13489999998876543 678999999999877543
No 173
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.28 E-value=2.9e-11 Score=120.04 Aligned_cols=99 Identities=16% Similarity=0.237 Sum_probs=84.2
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC--CCCCCcc
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY--LPEAPYD 209 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD 209 (511)
....+|||||||+|..+..+++.+ |..+++++|+ +.+++.|++++...+ ..++++++.+|+.+.. .+ ++||
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~p-~~~D 250 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLS----GSERIHGHGANLLDRDVPFP-TGFD 250 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCT----TGGGEEEEECCCCSSSCCCC-CCCS
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcC----cccceEEEEccccccCCCCC-CCcC
Confidence 466899999999999999999997 7889999999 999999999988754 2468999999998742 23 6899
Q ss_pred EEEecCCCCch--------HHHHHhhcccCcEEEEE
Q psy7829 210 VIYYGGCVSEV--------PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 210 ~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~ 237 (511)
+|++...++++ ++++.+.|||||++++.
T Consensus 251 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 251 AVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIM 286 (363)
T ss_dssp EEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred EEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99999888643 47889999999999884
No 174
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.28 E-value=3e-11 Score=120.17 Aligned_cols=99 Identities=19% Similarity=0.256 Sum_probs=84.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
..++.+|||+|||+|.++..+++.+ |..+++++|+ +.+++.|++++...+ ..++++++.+|+.+..+ ..||+
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----l~~~v~~~~~d~~~~~p--~~~D~ 271 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRG----LADRCEILPGDFFETIP--DGADV 271 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTT----CTTTEEEEECCTTTCCC--SSCSE
T ss_pred CccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcC----cCCceEEeccCCCCCCC--CCceE
Confidence 4577899999999999999999996 7889999999 999999999988754 35689999999985433 27999
Q ss_pred EEecCCCCc--------hHHHHHhhcccCcEEEEE
Q psy7829 211 IYYGGCVSE--------VPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 211 I~~~~~~~~--------~~~~~~~~LkpgG~l~~~ 237 (511)
|++...+++ +++++.+.|||||++++.
T Consensus 272 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 272 YLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred EEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 999988854 347789999999999985
No 175
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.28 E-value=1.8e-11 Score=113.97 Aligned_cols=103 Identities=16% Similarity=0.262 Sum_probs=82.1
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCC
Q psy7829 122 DAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREG 201 (511)
Q Consensus 122 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 201 (511)
.+.+.+.....++.+|||+|||+|.++..+++.. + +++++|+|+.+++.++++. ++++++++|+.+.
T Consensus 29 ~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~--~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~~~ 95 (239)
T 3bxo_A 29 DIADLVRSRTPEASSLLDVACGTGTHLEHFTKEF-G--DTAGLELSEDMLTHARKRL----------PDATLHQGDMRDF 95 (239)
T ss_dssp HHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHH-S--EEEEEESCHHHHHHHHHHC----------TTCEEEECCTTTC
T ss_pred HHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhC-C--cEEEEeCCHHHHHHHHHhC----------CCCEEEECCHHHc
Confidence 3445554445678899999999999999999986 3 7999999999999998874 2589999999864
Q ss_pred CCCCCCccEEEecC-CCCch---------HHHHHhhcccCcEEEEEE
Q psy7829 202 YLPEAPYDVIYYGG-CVSEV---------PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 202 ~~~~~~fD~I~~~~-~~~~~---------~~~~~~~LkpgG~l~~~~ 238 (511)
.. .++||+|++.. .++++ ++++.+.|||||.+++..
T Consensus 96 ~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 96 RL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 43 57899999543 54433 377899999999999864
No 176
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.28 E-value=1.1e-11 Score=119.47 Aligned_cols=105 Identities=13% Similarity=0.155 Sum_probs=76.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcC-CCCCeEEEEccCCCC--------CC
Q psy7829 133 DGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLL-DSGRVRIVEADAREG--------YL 203 (511)
Q Consensus 133 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~--------~~ 203 (511)
++.+|||||||+|..+..+++.. ..+|+|+|+|+.|++.|+++....+.... ..-+++|.+.|+... ..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 57899999999998666665542 45899999999999999998876421000 001367888887311 12
Q ss_pred CCCCccEEEecCCCCc---------hHHHHHhhcccCcEEEEEEc
Q psy7829 204 PEAPYDVIYYGGCVSE---------VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 204 ~~~~fD~I~~~~~~~~---------~~~~~~~~LkpgG~l~~~~~ 239 (511)
+.++||+|+|..++++ +++++.++|||||.+++.+.
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 3478999998876643 34789999999999998765
No 177
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.28 E-value=2.2e-11 Score=109.39 Aligned_cols=97 Identities=24% Similarity=0.359 Sum_probs=79.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
++++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++++. +++++++|+.....+.++||+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~----------~~~~~~~d~~~~~~~~~~~D~ 110 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDFP----------EARWVVGDLSVDQISETDFDL 110 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCT----------TSEEEECCTTTSCCCCCCEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhCC----------CCcEEEcccccCCCCCCceeE
Confidence 568899999999999999999987 3479999999999999998742 589999998864444578999
Q ss_pred EEec-CCCCc--------hHHHHHhhcccCcEEEEEEcc
Q psy7829 211 IYYG-GCVSE--------VPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 211 I~~~-~~~~~--------~~~~~~~~LkpgG~l~~~~~~ 240 (511)
|+++ ..+++ +++++.+.|+|||.+++....
T Consensus 111 i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~ 149 (195)
T 3cgg_A 111 IVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGA 149 (195)
T ss_dssp EEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred EEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 9998 44433 347789999999999997654
No 178
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.27 E-value=5.9e-12 Score=121.22 Aligned_cols=104 Identities=18% Similarity=0.120 Sum_probs=75.7
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHh---CCCceE--EEEeCCHHHHHHHHHHHhccCCCcCCCCCeEE--EEccCCCCC--
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMV---GPTGKV--IGVEHIPELIEASLRNISKGNKDLLDSGRVRI--VEADAREGY-- 202 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~---~~~~~v--~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~--~~~d~~~~~-- 202 (511)
.++.+|||||||+|.++..++..+ .+..+| +++|+|++|++.|++++.... ..+++.+ ..+++....
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~----~~~~v~~~~~~~~~~~~~~~ 126 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS----NLENVKFAWHKETSSEYQSR 126 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS----SCTTEEEEEECSCHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc----CCCcceEEEEecchhhhhhh
Confidence 457799999999998776443322 145544 999999999999999986531 2345555 444443211
Q ss_pred ----CCCCCccEEEecCCCCchH------HHHHhhcccCcEEEEEEc
Q psy7829 203 ----LPEAPYDVIYYGGCVSEVP------SRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 203 ----~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~l~~~~~ 239 (511)
..+++||+|++..+++++. +++.++|||||++++...
T Consensus 127 ~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 127 MLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV 173 (292)
T ss_dssp HHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 2347899999999998763 789999999999998644
No 179
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.27 E-value=2.3e-11 Score=110.13 Aligned_cols=95 Identities=17% Similarity=0.207 Sum_probs=75.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC-------
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGP-TGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY------- 202 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~------- 202 (511)
++++.+|||+|||+|.++..+++.+++ .++|+|+|+++.. ..++++++++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------------~~~~v~~~~~d~~~~~~~~~~~~ 83 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------------PIPNVYFIQGEIGKDNMNNIKNI 83 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------------CCTTCEEEECCTTTTSSCCC---
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------------CCCCceEEEccccchhhhhhccc
Confidence 568889999999999999999998742 6899999999831 1346899999987643
Q ss_pred ------------------CCCCCccEEEecCCCCc-----------------hHHHHHhhcccCcEEEEEEccC
Q psy7829 203 ------------------LPEAPYDVIYYGGCVSE-----------------VPSRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 203 ------------------~~~~~fD~I~~~~~~~~-----------------~~~~~~~~LkpgG~l~~~~~~~ 241 (511)
.+.++||+|+++.+++. +.+++.+.|||||.+++.+...
T Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 84 NYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp --------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred cccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC
Confidence 23468999999877654 3456889999999999876543
No 180
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.27 E-value=2e-11 Score=115.39 Aligned_cols=102 Identities=25% Similarity=0.305 Sum_probs=79.9
Q ss_pred HHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC
Q psy7829 124 AENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL 203 (511)
Q Consensus 124 ~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 203 (511)
.+.+...+.++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.++++... + ++++|+.....
T Consensus 45 ~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~---------~--~~~~d~~~~~~ 110 (260)
T 2avn_A 45 GSFLEEYLKNPCRVLDLGGGTGKWSLFLQERG---FEVVLVDPSKEMLEVAREKGVK---------N--VVEAKAEDLPF 110 (260)
T ss_dssp HHHHHHHCCSCCEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHHTCS---------C--EEECCTTSCCS
T ss_pred HHHHHHhcCCCCeEEEeCCCcCHHHHHHHHcC---CeEEEEeCCHHHHHHHHhhcCC---------C--EEECcHHHCCC
Confidence 33343334578899999999999999998863 4799999999999999987431 2 78899876554
Q ss_pred CCCCccEEEecCCCCc-------hHHHHHhhcccCcEEEEEEc
Q psy7829 204 PEAPYDVIYYGGCVSE-------VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 204 ~~~~fD~I~~~~~~~~-------~~~~~~~~LkpgG~l~~~~~ 239 (511)
+.++||+|++...+.+ +++++.+.|||||.+++.+.
T Consensus 111 ~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 111 PSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp CTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeC
Confidence 5678999999765432 34788999999999998764
No 181
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.27 E-value=9.2e-12 Score=121.26 Aligned_cols=104 Identities=19% Similarity=0.195 Sum_probs=82.7
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhcc--CCCcCCCCCeEEEEccCCCCC--CCCCC
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKG--NKDLLDSGRVRIVEADAREGY--LPEAP 207 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~~~~~~~~v~~~~~d~~~~~--~~~~~ 207 (511)
.++.+|||||||+|.++..+++.. +..+|+++|+++.+++.|++++... + +..++++++++|+.+.. ...++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~g---l~~~rv~~~~~D~~~~l~~~~~~~ 194 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIG---YEDPRVNLVIGDGVAFLKNAAEGS 194 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGG---GGSTTEEEEESCHHHHHHTSCTTC
T ss_pred CCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccc---cCCCcEEEEECCHHHHHHhccCCC
Confidence 467899999999999999999874 5679999999999999999998642 1 12458999999986421 12468
Q ss_pred ccEEEecCCC----------CchHHHHHhhcccCcEEEEEEc
Q psy7829 208 YDVIYYGGCV----------SEVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 208 fD~I~~~~~~----------~~~~~~~~~~LkpgG~l~~~~~ 239 (511)
||+|+++... ..+.+.+.+.|||||.+++...
T Consensus 195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 236 (334)
T 1xj5_A 195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE 236 (334)
T ss_dssp EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 9999997652 2345789999999999998643
No 182
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.27 E-value=1.3e-11 Score=120.44 Aligned_cols=116 Identities=16% Similarity=0.024 Sum_probs=87.3
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccC
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADA 198 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 198 (511)
....+.+.+.. ..++.+|||+|||+|.++..+++.. . +|+++|+|+.+++.|++|++.++. ...+++++++|+
T Consensus 140 ~~~~l~~~~~~-~~~~~~VLDlgcGtG~~sl~la~~g-a--~V~~VD~s~~al~~a~~n~~~~gl---~~~~v~~i~~D~ 212 (332)
T 2igt_A 140 HWEWLKNAVET-ADRPLKVLNLFGYTGVASLVAAAAG-A--EVTHVDASKKAIGWAKENQVLAGL---EQAPIRWICEDA 212 (332)
T ss_dssp HHHHHHHHHHH-SSSCCEEEEETCTTCHHHHHHHHTT-C--EEEEECSCHHHHHHHHHHHHHHTC---TTSCEEEECSCH
T ss_pred HHHHHHHHHHh-cCCCCcEEEcccccCHHHHHHHHcC-C--EEEEEECCHHHHHHHHHHHHHcCC---CccceEEEECcH
Confidence 33445555531 3467899999999999999999863 3 899999999999999999988751 112599999998
Q ss_pred CCCCCC----CCCccEEEecCCC----------------CchHHHHHhhcccCcEEEEEEccC
Q psy7829 199 REGYLP----EAPYDVIYYGGCV----------------SEVPSRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 199 ~~~~~~----~~~fD~I~~~~~~----------------~~~~~~~~~~LkpgG~l~~~~~~~ 241 (511)
.+.... .++||+|+++++. ..+...+.+.|||||.+++.....
T Consensus 213 ~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 213 MKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred HHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 753221 3689999998774 123467789999999988866543
No 183
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.26 E-value=6.2e-11 Score=111.87 Aligned_cols=105 Identities=19% Similarity=0.252 Sum_probs=77.4
Q ss_pred CCCEEEEEcCCccH----HHHHHHHHhCC---CceEEEEeCCHHHHHHHHHHHhcc---------------------CCC
Q psy7829 133 DGAKVLDLGSGSGY----QTCVFAHMVGP---TGKVIGVEHIPELIEASLRNISKG---------------------NKD 184 (511)
Q Consensus 133 ~~~~vLDiG~G~G~----~~~~la~~~~~---~~~v~~iD~~~~~~~~a~~~~~~~---------------------~~~ 184 (511)
++.+|||+|||||. +++.+++..+. ..+|+|+|+|+.+++.|++++... +.+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 66667776542 358999999999999999875210 000
Q ss_pred -c-C---CCCCeEEEEccCCCC-CCCCCCccEEEecCCCCch--------HHHHHhhcccCcEEEEE
Q psy7829 185 -L-L---DSGRVRIVEADAREG-YLPEAPYDVIYYGGCVSEV--------PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 185 -~-~---~~~~v~~~~~d~~~~-~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~ 237 (511)
+ + ...+|.|.++|+.+. ++..++||+|+|.+++.++ .+++.+.|+|||.|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 0 0 013699999999874 3324789999998877433 46788999999999874
No 184
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.26 E-value=2e-11 Score=120.33 Aligned_cols=106 Identities=21% Similarity=0.235 Sum_probs=82.9
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCC
Q psy7829 122 DAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREG 201 (511)
Q Consensus 122 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 201 (511)
.+++.+. ..++.+|||||||+|.++..+++. ...+|+++|+++ +++.|+++++.++ ..++++++.+|+.+.
T Consensus 41 ~i~~~l~--~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~----l~~~v~~~~~d~~~~ 111 (348)
T 2y1w_A 41 AILQNHT--DFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNN----LTDRIVVIPGKVEEV 111 (348)
T ss_dssp HHHHTGG--GTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTT----CTTTEEEEESCTTTC
T ss_pred HHHhccc--cCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcC----CCCcEEEEEcchhhC
Confidence 3444443 467899999999999999999886 346899999996 8899999988765 346899999999864
Q ss_pred CCCCCCccEEEecCCCCch--------HHHHHhhcccCcEEEEE
Q psy7829 202 YLPEAPYDVIYYGGCVSEV--------PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 202 ~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~ 237 (511)
..+ ++||+|++..+..++ ...+.+.|||||.+++.
T Consensus 112 ~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 112 SLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 333 689999998764322 24567999999999864
No 185
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.25 E-value=3e-11 Score=118.67 Aligned_cols=108 Identities=18% Similarity=0.255 Sum_probs=87.8
Q ss_pred HHHHHHhhcC--CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCC
Q psy7829 122 DAAENLKLHL--VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAR 199 (511)
Q Consensus 122 ~~~~~l~~~~--~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 199 (511)
.+++.+. . .++.+|||+|||+|..+..+++.. |..+++++|++ .+++.|++++...+ ..++++++.+|+.
T Consensus 154 ~~~~~~~--~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~----~~~~v~~~~~d~~ 225 (335)
T 2r3s_A 154 LIAQLVN--ENKIEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQG----VASRYHTIAGSAF 225 (335)
T ss_dssp HHHHHHT--C--CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHT----CGGGEEEEESCTT
T ss_pred HHHHhcc--cccCCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcC----CCcceEEEecccc
Confidence 4455554 4 678899999999999999999987 77899999999 99999999988754 2347999999998
Q ss_pred CCCCCCCCccEEEecCCCCch--------HHHHHhhcccCcEEEEEE
Q psy7829 200 EGYLPEAPYDVIYYGGCVSEV--------PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 200 ~~~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~~ 238 (511)
+...+ ..||+|++..+++++ ++++.+.|||||++++..
T Consensus 226 ~~~~~-~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 226 EVDYG-NDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp TSCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCC-CCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 64333 349999998887654 367899999999988853
No 186
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.25 E-value=1.3e-11 Score=118.54 Aligned_cols=117 Identities=15% Similarity=0.209 Sum_probs=80.2
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCc-----------C-
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDL-----------L- 186 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-----------~- 186 (511)
....+.+.+.....++.+|||||||+|..+..++.. ...+|+|+|+|+.|++.|++++....... +
T Consensus 57 ~~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~ 134 (289)
T 2g72_A 57 KLRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACS--HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIE 134 (289)
T ss_dssp HHHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGG--GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhcc--CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhc
Confidence 344555555422347889999999999955444443 24589999999999999998765321000 0
Q ss_pred C-C------------CCeEEEEccCCC-CC-----CCCCCccEEEecCCCCc----h------HHHHHhhcccCcEEEEE
Q psy7829 187 D-S------------GRVRIVEADARE-GY-----LPEAPYDVIYYGGCVSE----V------PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 187 ~-~------------~~v~~~~~d~~~-~~-----~~~~~fD~I~~~~~~~~----~------~~~~~~~LkpgG~l~~~ 237 (511)
+ . ..++++.+|+.. .+ .+.++||+|+++.++++ + ++++.++|||||+|++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 135 GKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp CSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 0 0 015677889876 22 12356999999988876 3 26789999999999995
No 187
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.25 E-value=2.9e-11 Score=118.64 Aligned_cols=99 Identities=17% Similarity=0.112 Sum_probs=83.9
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEE
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVI 211 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I 211 (511)
.++.+|||+|||+|..+..+++.+ |..+++++|+ +.+++.|++++...+ ..++++|+.+|+.+..+ ..||+|
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~p--~~~D~v 239 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTG----LSGRAQVVVGSFFDPLP--AGAGGY 239 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTT----CTTTEEEEECCTTSCCC--CSCSEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcC----cCcCeEEecCCCCCCCC--CCCcEE
Confidence 356799999999999999999987 7789999999 999999999988754 34689999999975433 279999
Q ss_pred EecCCCCch--------HHHHHhhcccCcEEEEEE
Q psy7829 212 YYGGCVSEV--------PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 212 ~~~~~~~~~--------~~~~~~~LkpgG~l~~~~ 238 (511)
++...++++ ++++.+.|||||++++..
T Consensus 240 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 240 VLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred EEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 999888654 367899999999999853
No 188
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.25 E-value=1.4e-11 Score=117.83 Aligned_cols=100 Identities=27% Similarity=0.249 Sum_probs=81.7
Q ss_pred CEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC--CCCCCccEEE
Q psy7829 135 AKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY--LPEAPYDVIY 212 (511)
Q Consensus 135 ~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~I~ 212 (511)
.+|||||||+|.++..+++.+ +..+|+++|+++.+++.|++++... ..++++++++|+.+.. ...++||+|+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~-----~~~rv~v~~~Da~~~l~~~~~~~fDvIi 164 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIP-----RAPRVKIRVDDARMVAESFTPASRDVII 164 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCC-----CTTTEEEEESCHHHHHHTCCTTCEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhcccc-----CCCceEEEECcHHHHHhhccCCCCCEEE
Confidence 499999999999999999976 6779999999999999999997652 3568999999987532 1247899999
Q ss_pred ecCCCC----------chHHHHHhhcccCcEEEEEEcc
Q psy7829 213 YGGCVS----------EVPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 213 ~~~~~~----------~~~~~~~~~LkpgG~l~~~~~~ 240 (511)
++...+ .+.+.+++.|||||.+++....
T Consensus 165 ~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 165 RDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp ECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 975332 2457899999999999987653
No 189
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.25 E-value=3.3e-11 Score=117.76 Aligned_cols=99 Identities=24% Similarity=0.279 Sum_probs=79.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
..++.+|||+|||+|.++..+++. ...+|+++|++ .+++.|+++++.++ ..++++++.+|+.+...+.++||+
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~----~~~~i~~~~~d~~~~~~~~~~~D~ 108 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNG----FSDKITLLRGKLEDVHLPFPKVDI 108 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTT----CTTTEEEEESCTTTSCCSSSCEEE
T ss_pred hcCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcC----CCCCEEEEECchhhccCCCCcccE
Confidence 457889999999999999999886 24589999999 69999999998865 346799999999875444478999
Q ss_pred EEecCCCC---------chHHHHHhhcccCcEEEE
Q psy7829 211 IYYGGCVS---------EVPSRVLNQLKKGGRILA 236 (511)
Q Consensus 211 I~~~~~~~---------~~~~~~~~~LkpgG~l~~ 236 (511)
|++..+.. .+...+.+.|||||.++.
T Consensus 109 Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 109 IISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp EEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 99875422 233567799999999973
No 190
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.25 E-value=1.9e-11 Score=112.66 Aligned_cols=105 Identities=20% Similarity=0.167 Sum_probs=82.2
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCC
Q psy7829 121 ADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADARE 200 (511)
Q Consensus 121 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 200 (511)
..+++.+. ..++.+|||+|||+|.++..+++. ..+|+++|+++.+++.++++ . ++.+..+|+..
T Consensus 42 ~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~--~---------~~~~~~~~~~~ 105 (227)
T 3e8s_A 42 QAILLAIL--GRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA--G---------AGEVHLASYAQ 105 (227)
T ss_dssp HHHHHHHH--HTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT--C---------SSCEEECCHHH
T ss_pred HHHHHHhh--cCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh--c---------ccccchhhHHh
Confidence 44555554 456799999999999999999987 34799999999999999876 1 46777777653
Q ss_pred C----CCCCCCccEEEecCCCC-----chHHHHHhhcccCcEEEEEEccC
Q psy7829 201 G----YLPEAPYDVIYYGGCVS-----EVPSRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 201 ~----~~~~~~fD~I~~~~~~~-----~~~~~~~~~LkpgG~l~~~~~~~ 241 (511)
. .....+||+|++..+++ .+++++.+.|||||.+++.....
T Consensus 106 ~~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 106 LAEAKVPVGKDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp HHTTCSCCCCCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred hcccccccCCCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 2 23345699999998876 34589999999999999976644
No 191
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.24 E-value=1.9e-11 Score=121.70 Aligned_cols=98 Identities=27% Similarity=0.256 Sum_probs=80.7
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
..++.+|||+|||+|.++..+++.. ..+|+|+|+| .+++.|+++++.++ ..++++++++|+.+...+ ++||+
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g--~~~V~gvD~s-~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~-~~~D~ 132 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG--ARKVYAVEAT-KMADHARALVKANN----LDHIVEVIEGSVEDISLP-EKVDV 132 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT--CSEEEEEESS-TTHHHHHHHHHHTT----CTTTEEEEESCGGGCCCS-SCEEE
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC--CCEEEEEccH-HHHHHHHHHHHHcC----CCCeEEEEECchhhcCcC-CcceE
Confidence 4678999999999999999999873 3589999999 99999999998875 345799999999875444 78999
Q ss_pred EEecCCCC---------chHHHHHhhcccCcEEEE
Q psy7829 211 IYYGGCVS---------EVPSRVLNQLKKGGRILA 236 (511)
Q Consensus 211 I~~~~~~~---------~~~~~~~~~LkpgG~l~~ 236 (511)
|+++...+ .+...+.+.|||||.+++
T Consensus 133 Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 133 IISEWMGYFLLRESMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp EEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEES
T ss_pred EEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEE
Confidence 99965332 134677899999999976
No 192
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.24 E-value=3.1e-11 Score=120.49 Aligned_cols=100 Identities=23% Similarity=0.241 Sum_probs=84.3
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
+.++.+|||||||+|.++..+++.+ +..+++++|+ +.+++.|++++...+ ..++++++.+|+.+..+ ..||+
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~--~~~D~ 251 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAG----LADRVTVAEGDFFKPLP--VTADV 251 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTT----CTTTEEEEECCTTSCCS--CCEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcC----CCCceEEEeCCCCCcCC--CCCCE
Confidence 5678899999999999999999987 7789999999 999999999988754 34589999999876433 34999
Q ss_pred EEecCCCCc--------hHHHHHhhcccCcEEEEEE
Q psy7829 211 IYYGGCVSE--------VPSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 211 I~~~~~~~~--------~~~~~~~~LkpgG~l~~~~ 238 (511)
|++..++++ +++++.+.|||||++++..
T Consensus 252 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 252 VLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLD 287 (374)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999988864 3477899999999998753
No 193
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.24 E-value=1.2e-10 Score=105.67 Aligned_cols=128 Identities=16% Similarity=0.164 Sum_probs=91.3
Q ss_pred CHHHH-HHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cccccccccccc
Q psy7829 356 SERSI-AHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETI 431 (511)
Q Consensus 356 ~~~~~-~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~ 431 (511)
+++.+ +.++.. +.+.++.+|||+|||+|.+++.+++.. |..+|+++|+++++++.++++.. ..+++++.+|..
T Consensus 24 ~~~~i~~~~l~~--l~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 100 (204)
T 3e05_A 24 TKQEVRAVTLSK--LRLQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAP 100 (204)
T ss_dssp CCHHHHHHHHHH--TTCCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTT
T ss_pred ChHHHHHHHHHH--cCCCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChh
Confidence 44555 445554 788899999999999999999999886 67899999999998888777653 467888888765
Q ss_pred cccc--ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHhcCC
Q psy7829 432 EIIP--HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL---EHMMDIAIESIANIST 494 (511)
Q Consensus 432 ~~l~--~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~~~~ 494 (511)
+.++ ..+|.++..... .....+...+.+.|+|+|.++.. ..-.+...+.+++.|+
T Consensus 101 ~~~~~~~~~D~i~~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 101 EGLDDLPDPDRVFIGGSG--------GMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY 160 (204)
T ss_dssp TTCTTSCCCSEEEESCCT--------TCHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred hhhhcCCCCCEEEECCCC--------cCHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC
Confidence 5443 223333222111 02345567778889999998877 4555666667777776
No 194
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.24 E-value=1.4e-10 Score=115.42 Aligned_cols=102 Identities=11% Similarity=0.043 Sum_probs=84.1
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC--CCCCcc
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL--PEAPYD 209 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~fD 209 (511)
.++.+|||+| |+|.++..+++.. +..+|+++|+++.+++.|+++++.+| ..+++++++|+.+..+ ..++||
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~-~~~~v~~vDi~~~~l~~a~~~~~~~g-----~~~v~~~~~D~~~~l~~~~~~~fD 243 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSG-LPKRIAVLDIDERLTKFIEKAANEIG-----YEDIEIFTFDLRKPLPDYALHKFD 243 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHT-CCSEEEEECSCHHHHHHHHHHHHHHT-----CCCEEEECCCTTSCCCTTTSSCBS
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC-----CCCEEEEEChhhhhchhhccCCcc
Confidence 3688999999 9999999998874 66799999999999999999999865 3389999999987333 236899
Q ss_pred EEEecCCCC-----chHHHHHhhcccCcE-EEEEEcc
Q psy7829 210 VIYYGGCVS-----EVPSRVLNQLKKGGR-ILAPIGP 240 (511)
Q Consensus 210 ~I~~~~~~~-----~~~~~~~~~LkpgG~-l~~~~~~ 240 (511)
+|+++.++. .+.+++.+.|||||+ +++.+..
T Consensus 244 ~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 244 TFITDPPETLEAIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred EEEECCCCchHHHHHHHHHHHHHcccCCeEEEEEEec
Confidence 999998874 345789999999994 4666654
No 195
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.24 E-value=6.1e-11 Score=117.61 Aligned_cols=108 Identities=19% Similarity=0.271 Sum_probs=87.3
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCC
Q psy7829 121 ADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADARE 200 (511)
Q Consensus 121 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 200 (511)
..+++.+. ..++.+|||||||+|.++..+++.. |..+++++|+ +.+++.|++++...+ ..++++++.+|+.+
T Consensus 180 ~~l~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~ 251 (359)
T 1x19_A 180 QLLLEEAK--LDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKG----VADRMRGIAVDIYK 251 (359)
T ss_dssp HHHHHHCC--CTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTT----CTTTEEEEECCTTT
T ss_pred HHHHHhcC--CCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcC----CCCCEEEEeCcccc
Confidence 34444443 5678899999999999999999997 7789999999 999999999988754 24469999999986
Q ss_pred CCCCCCCccEEEecCCCCch--------HHHHHhhcccCcEEEEEE
Q psy7829 201 GYLPEAPYDVIYYGGCVSEV--------PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 201 ~~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~~ 238 (511)
...+ .+|+|++...++++ ++++.+.|||||++++..
T Consensus 252 ~~~~--~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 252 ESYP--EADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp SCCC--CCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred CCCC--CCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 5333 34999999887644 367899999999998743
No 196
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.22 E-value=2.6e-11 Score=120.02 Aligned_cols=102 Identities=20% Similarity=0.249 Sum_probs=84.6
Q ss_pred CCC-CCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC-CCCCc
Q psy7829 131 LVD-GAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL-PEAPY 208 (511)
Q Consensus 131 ~~~-~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~f 208 (511)
..+ +.+|||||||+|.++..+++.+ |..+++++|+ +.+++.+++++...+ ..++++++.+|+.+... ..+.|
T Consensus 176 ~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~ 249 (352)
T 3mcz_A 176 VFARARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHD----LGGRVEFFEKNLLDARNFEGGAA 249 (352)
T ss_dssp GGTTCCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTT----CGGGEEEEECCTTCGGGGTTCCE
T ss_pred CcCCCCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcC----CCCceEEEeCCcccCcccCCCCc
Confidence 345 7899999999999999999987 7789999999 889999999988754 34579999999986531 23569
Q ss_pred cEEEecCCCCch--------HHHHHhhcccCcEEEEEE
Q psy7829 209 DVIYYGGCVSEV--------PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 209 D~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~~ 238 (511)
|+|++...++++ ++++.+.|||||++++..
T Consensus 250 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 250 DVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 999999888643 367899999999998853
No 197
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.22 E-value=2.1e-11 Score=115.37 Aligned_cols=107 Identities=16% Similarity=0.196 Sum_probs=81.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCc------------CC-----------
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDL------------LD----------- 187 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~------------~~----------- 187 (511)
..++.+|||+|||+|.++..+++.. . .+|+++|+|+.+++.+++++...+... -+
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACES-F-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGT-E-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhcc-c-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 3567899999999999999888764 3 579999999999999999876531000 00
Q ss_pred -CCCe-EEEEccCCCCCC-CC---CCccEEEecCCCC----c------hHHHHHhhcccCcEEEEEEc
Q psy7829 188 -SGRV-RIVEADAREGYL-PE---APYDVIYYGGCVS----E------VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 188 -~~~v-~~~~~d~~~~~~-~~---~~fD~I~~~~~~~----~------~~~~~~~~LkpgG~l~~~~~ 239 (511)
..++ +++++|+.+..+ .. ++||+|++..+++ + +++++.++|||||.+++...
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 0127 899999986432 33 7899999988876 4 23778999999999999764
No 198
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.22 E-value=4e-11 Score=117.73 Aligned_cols=99 Identities=17% Similarity=0.264 Sum_probs=83.2
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
..+ .+|||+|||+|..+..+++.. |..+++++|+ +.+++.|++++...+ ..++++++.+|+.+.. + +.||+
T Consensus 166 ~~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~-~-~~~D~ 236 (334)
T 2ip2_A 166 FRG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLL----AGERVSLVGGDMLQEV-P-SNGDI 236 (334)
T ss_dssp CTT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHH----HTTSEEEEESCTTTCC-C-SSCSE
T ss_pred CCC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcC----CCCcEEEecCCCCCCC-C-CCCCE
Confidence 445 899999999999999999987 7789999999 999999999877643 2457999999998743 3 67999
Q ss_pred EEecCCCCc--------hHHHHHhhcccCcEEEEEE
Q psy7829 211 IYYGGCVSE--------VPSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 211 I~~~~~~~~--------~~~~~~~~LkpgG~l~~~~ 238 (511)
|++...+++ +++++.+.|||||++++..
T Consensus 237 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 237 YLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999988863 3478899999999999853
No 199
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.21 E-value=2.4e-11 Score=107.37 Aligned_cols=96 Identities=18% Similarity=0.289 Sum_probs=77.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC--------
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY-------- 202 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-------- 202 (511)
+.++.+|||+|||+|.++..+++.+++..+++++|+++ +++. .+++++++|+.+..
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------------~~~~~~~~d~~~~~~~~~~~~~ 83 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------------VGVDFLQGDFRDELVMKALLER 83 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------------TTEEEEESCTTSHHHHHHHHHH
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------------CcEEEEEcccccchhhhhhhcc
Confidence 56888999999999999999999876678999999998 6421 36899999987642
Q ss_pred CCCCCccEEEecCCCC-----------------chHHHHHhhcccCcEEEEEEccCC
Q psy7829 203 LPEAPYDVIYYGGCVS-----------------EVPSRVLNQLKKGGRILAPIGPMD 242 (511)
Q Consensus 203 ~~~~~fD~I~~~~~~~-----------------~~~~~~~~~LkpgG~l~~~~~~~~ 242 (511)
.+.++||+|+++.+++ .+.+++.+.|+|||.+++......
T Consensus 84 ~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 84 VGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp HTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred CCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 3347899999987764 344778899999999998765443
No 200
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.21 E-value=5.8e-11 Score=117.85 Aligned_cols=100 Identities=25% Similarity=0.292 Sum_probs=84.2
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
..++.+|||+|||+|.++..+++.. +..+++++|+ +.+++.|++++...+ ..++++++.+|+.+..+ ..||+
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~--~~~D~ 252 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEG----LSDRVDVVEGDFFEPLP--RKADA 252 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTT----CTTTEEEEECCTTSCCS--SCEEE
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcC----CCCceEEEeCCCCCCCC--CCccE
Confidence 5678899999999999999999986 7789999999 999999999988764 34589999999876443 34999
Q ss_pred EEecCCCCc--------hHHHHHhhcccCcEEEEEE
Q psy7829 211 IYYGGCVSE--------VPSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 211 I~~~~~~~~--------~~~~~~~~LkpgG~l~~~~ 238 (511)
|++...+++ +++++.+.|||||++++..
T Consensus 253 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 253 IILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999888754 3477899999999998853
No 201
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.21 E-value=5.6e-11 Score=118.14 Aligned_cols=114 Identities=18% Similarity=0.098 Sum_probs=87.6
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEE
Q psy7829 116 APNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVE 195 (511)
Q Consensus 116 ~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 195 (511)
.+.+.+.++... ..++.+|||+|||+|.+++.++... +.++|+|+|+++.+++.|++|+..+| ..+++++.+
T Consensus 203 ~~~la~~l~~~~---~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~g----l~~~i~~~~ 274 (373)
T 3tm4_A 203 KASIANAMIELA---ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAG----VLDKIKFIQ 274 (373)
T ss_dssp CHHHHHHHHHHH---TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTT----CGGGCEEEE
T ss_pred cHHHHHHHHHhh---cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcC----CCCceEEEE
Confidence 455566565554 5688999999999999999999875 55689999999999999999999875 236899999
Q ss_pred ccCCCCCCCCCCccEEEecCCCCc--------------hHHHHHhhcccCcEEEEEEc
Q psy7829 196 ADAREGYLPEAPYDVIYYGGCVSE--------------VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 196 ~d~~~~~~~~~~fD~I~~~~~~~~--------------~~~~~~~~LkpgG~l~~~~~ 239 (511)
+|+.+.....++||+|++++++.. +.+.+.+.| +|.+++...
T Consensus 275 ~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~ 330 (373)
T 3tm4_A 275 GDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT 330 (373)
T ss_dssp CCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES
T ss_pred CChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC
Confidence 999875544578999999988532 235666767 555555443
No 202
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.21 E-value=2.9e-11 Score=116.15 Aligned_cols=107 Identities=24% Similarity=0.202 Sum_probs=81.8
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC-CCCCCccE
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY-LPEAPYDV 210 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~ 210 (511)
..+.+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++...+.. +..++++++.+|+.... ...++||+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~-~~~~~v~~~~~D~~~~l~~~~~~fD~ 166 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCG-FDDPRAEIVIANGAEYVRKFKNEFDV 166 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGG-GGCTTEEEEESCHHHHGGGCSSCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccc-cCCCceEEEECcHHHHHhhCCCCceE
Confidence 456899999999999999999875 5679999999999999999997541000 12468999999976422 12468999
Q ss_pred EEecCCCC-----------chHHHHHhhcccCcEEEEEEcc
Q psy7829 211 IYYGGCVS-----------EVPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 211 I~~~~~~~-----------~~~~~~~~~LkpgG~l~~~~~~ 240 (511)
|+++.+.+ .+.+.+.+.|||||.+++....
T Consensus 167 Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 167 IIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 99876433 3457899999999999997543
No 203
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.21 E-value=3.2e-11 Score=116.14 Aligned_cols=104 Identities=18% Similarity=0.155 Sum_probs=82.8
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhc--cCCCcCCCCCeEEEEccCCCCC-CCCCCc
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISK--GNKDLLDSGRVRIVEADAREGY-LPEAPY 208 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~--~~~~~~~~~~v~~~~~d~~~~~-~~~~~f 208 (511)
.++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++.. .+ +..++++++.+|+.+.. ...++|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~---~~~~rv~v~~~Da~~~l~~~~~~f 169 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIG---YSSSKLTLHVGDGFEFMKQNQDAF 169 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGG---GGCTTEEEEESCHHHHHHTCSSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcc---cCCCcEEEEECcHHHHHhhCCCCc
Confidence 467899999999999999999874 567999999999999999999764 11 12468999999986421 124789
Q ss_pred cEEEecCCCC----------chHHHHHhhcccCcEEEEEEc
Q psy7829 209 DVIYYGGCVS----------EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 209 D~I~~~~~~~----------~~~~~~~~~LkpgG~l~~~~~ 239 (511)
|+|+++.+.+ .+.+++.+.|||||.+++...
T Consensus 170 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 170 DVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp EEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 9999986642 356889999999999998764
No 204
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.21 E-value=4.4e-11 Score=113.68 Aligned_cols=106 Identities=23% Similarity=0.199 Sum_probs=83.7
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC-CCCCCccE
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY-LPEAPYDV 210 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~ 210 (511)
..+.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|++++...... +..++++++.+|+.+.. ...++||+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~-~~~~rv~v~~~D~~~~l~~~~~~fD~ 151 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGK-LDDPRVDVQVDDGFMHIAKSENQYDV 151 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTT-TTSTTEEEEESCSHHHHHTCCSCEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccc-cCCCceEEEECcHHHHHhhCCCCeeE
Confidence 357899999999999999998864 4678999999999999999987542100 13568999999986422 12478999
Q ss_pred EEecCCCC----------chHHHHHhhcccCcEEEEEEc
Q psy7829 211 IYYGGCVS----------EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 211 I~~~~~~~----------~~~~~~~~~LkpgG~l~~~~~ 239 (511)
|+++...+ .+.+.+.+.|||||.+++...
T Consensus 152 Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 152 IMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp EEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 99987542 356899999999999998754
No 205
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.20 E-value=3.1e-11 Score=123.50 Aligned_cols=99 Identities=21% Similarity=0.246 Sum_probs=79.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
..++.+|||||||+|.++..+++. +..+|+++|+++ +++.|++++..++ ..++++++.+|+.+...+ ++||+
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~g----l~~~v~~~~~d~~~~~~~-~~fD~ 227 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNN----LTDRIVVIPGKVEEVSLP-EQVDI 227 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTT----CTTTEEEEESCTTTCCCS-SCEEE
T ss_pred hcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcC----CCCcEEEEECchhhCccC-CCeEE
Confidence 357889999999999999998884 456899999998 9999999998865 346899999999873322 68999
Q ss_pred EEecCCCCch--------HHHHHhhcccCcEEEEE
Q psy7829 211 IYYGGCVSEV--------PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 211 I~~~~~~~~~--------~~~~~~~LkpgG~l~~~ 237 (511)
|+++.+..+. ...+.+.|||||.+++.
T Consensus 228 Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 228 IISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp EECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred EEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9998764322 24557899999999863
No 206
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.20 E-value=2.4e-11 Score=115.94 Aligned_cols=106 Identities=23% Similarity=0.212 Sum_probs=82.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcC-------CCCCeEEEEccCCCCCC
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLL-------DSGRVRIVEADAREGYL 203 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~-------~~~~v~~~~~d~~~~~~ 203 (511)
..++.+|||||||+|.++..+++. +..+|+++|+++.+++.|++++ ....+ + ..++++++.+|+.+...
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~~~-l~~~~~~~~~~~v~~~~~D~~~~l~ 148 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KIDNG-LLEAMLNGKHEKAKLTIGDGFEFIK 148 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTTTT-HHHHHHTTCCSSEEEEESCHHHHHH
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhccc-cccccccCCCCcEEEEECchHHHhc
Confidence 346789999999999999999987 4678999999999999999998 42100 1 24689999999754211
Q ss_pred CCCCccEEEecCCC----------CchHHHHHhhcccCcEEEEEEcc
Q psy7829 204 PEAPYDVIYYGGCV----------SEVPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 204 ~~~~fD~I~~~~~~----------~~~~~~~~~~LkpgG~l~~~~~~ 240 (511)
..++||+|+++.+. ..+.+.+.+.|+|||.+++..+.
T Consensus 149 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 149 NNRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp HCCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ccCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 14689999998764 22457899999999999987543
No 207
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.20 E-value=5.3e-11 Score=113.78 Aligned_cols=111 Identities=17% Similarity=0.210 Sum_probs=87.5
Q ss_pred chhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEE
Q psy7829 115 NAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIV 194 (511)
Q Consensus 115 ~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 194 (511)
..+.+...+++.+. +.++.+|||+|||+|.++..+++.. .+|+++|+++.+++.+++++...+ ..++++++
T Consensus 12 ~d~~i~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~ 82 (285)
T 1zq9_A 12 KNPLIINSIIDKAA--LRPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTP----VASKLQVL 82 (285)
T ss_dssp CCHHHHHHHHHHTC--CCTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTST----TGGGEEEE
T ss_pred CCHHHHHHHHHhcC--CCCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcC----CCCceEEE
Confidence 46778888888776 6788999999999999999999984 379999999999999999987643 23589999
Q ss_pred EccCCCCCCCCCCccEEEecCCCCchH---------------------HHH--HhhcccCcEEEE
Q psy7829 195 EADAREGYLPEAPYDVIYYGGCVSEVP---------------------SRV--LNQLKKGGRILA 236 (511)
Q Consensus 195 ~~d~~~~~~~~~~fD~I~~~~~~~~~~---------------------~~~--~~~LkpgG~l~~ 236 (511)
++|+.+... ..||+|+++.+++... +++ ...|+|||.++.
T Consensus 83 ~~D~~~~~~--~~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y~ 145 (285)
T 1zq9_A 83 VGDVLKTDL--PFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYC 145 (285)
T ss_dssp ESCTTTSCC--CCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTCS
T ss_pred Ecceecccc--hhhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcccc
Confidence 999976432 3799999987765421 222 257899998753
No 208
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.19 E-value=4.5e-11 Score=115.37 Aligned_cols=106 Identities=20% Similarity=0.153 Sum_probs=82.4
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC--CCCCcc
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL--PEAPYD 209 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~fD 209 (511)
.++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++...... ...++++++.+|+.+... ..++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRS-LADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGG-GGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcc-cCCCcEEEEECcHHHHHHhccCCcee
Confidence 567899999999999999999864 5679999999999999999987421000 134689999999875322 247899
Q ss_pred EEEecCCCC----------chHHHHHhhcccCcEEEEEEc
Q psy7829 210 VIYYGGCVS----------EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 210 ~I~~~~~~~----------~~~~~~~~~LkpgG~l~~~~~ 239 (511)
+|+++...+ .+.+++.+.|||||.+++...
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 999986543 345789999999999998654
No 209
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.18 E-value=9.1e-11 Score=111.79 Aligned_cols=106 Identities=19% Similarity=0.147 Sum_probs=86.5
Q ss_pred ccchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeE
Q psy7829 113 VMNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVR 192 (511)
Q Consensus 113 ~~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~ 192 (511)
.+..+.+...+++.+. +.++.+|||||||+|.++..+++.. .+|+++|+++.+++.+++++.. .++++
T Consensus 32 fL~d~~i~~~Iv~~l~--~~~~~~VLEIG~G~G~lT~~La~~~---~~V~aVEid~~li~~a~~~~~~-------~~~v~ 99 (295)
T 3gru_A 32 FLIDKNFVNKAVESAN--LTKDDVVLEIGLGKGILTEELAKNA---KKVYVIEIDKSLEPYANKLKEL-------YNNIE 99 (295)
T ss_dssp EECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCGGGHHHHHHHHHH-------CSSEE
T ss_pred ccCCHHHHHHHHHhcC--CCCcCEEEEECCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHhcc-------CCCeE
Confidence 4557778888998886 7789999999999999999999973 4799999999999999999874 34899
Q ss_pred EEEccCCCCCCCCCCccEEEecCCCCchHHHHHhhccc
Q psy7829 193 IVEADAREGYLPEAPYDVIYYGGCVSEVPSRVLNQLKK 230 (511)
Q Consensus 193 ~~~~d~~~~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkp 230 (511)
++++|+.+...+..+||.|+++.++.....-+.++|++
T Consensus 100 vi~gD~l~~~~~~~~fD~Iv~NlPy~is~pil~~lL~~ 137 (295)
T 3gru_A 100 IIWGDALKVDLNKLDFNKVVANLPYQISSPITFKLIKR 137 (295)
T ss_dssp EEESCTTTSCGGGSCCSEEEEECCGGGHHHHHHHHHHH
T ss_pred EEECchhhCCcccCCccEEEEeCcccccHHHHHHHHhc
Confidence 99999987444446799999998876554555555554
No 210
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.18 E-value=3.5e-11 Score=116.84 Aligned_cols=107 Identities=21% Similarity=0.164 Sum_probs=83.3
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC-CCCCCccE
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY-LPEAPYDV 210 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~ 210 (511)
.++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|++++..... .+..++++++++|+.+.. ...++||+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~-~~~~~~v~~~~~D~~~~l~~~~~~fDv 192 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISC-GYEDKRVNVFIEDASKFLENVTNTYDV 192 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSG-GGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhcc-ccCCCcEEEEEccHHHHHhhcCCCceE
Confidence 467899999999999999999864 567999999999999999999865210 012468999999986422 12368999
Q ss_pred EEecCCC----------CchHHHHHhhcccCcEEEEEEcc
Q psy7829 211 IYYGGCV----------SEVPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 211 I~~~~~~----------~~~~~~~~~~LkpgG~l~~~~~~ 240 (511)
|+++... ..+.+.+.+.|||||.+++....
T Consensus 193 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 193 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9988632 23457899999999999997543
No 211
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.18 E-value=6.6e-11 Score=116.39 Aligned_cols=97 Identities=25% Similarity=0.297 Sum_probs=77.0
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEE
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVI 211 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I 211 (511)
.+|.+|||||||+|.++..+|++. ..+|+++|.|+ +++.|+++++.++ ..++|+++.+|+.+...+ .+||+|
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aG--A~~V~ave~s~-~~~~a~~~~~~n~----~~~~i~~i~~~~~~~~lp-e~~Dvi 153 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAG--ARRVYAVEASA-IWQQAREVVRFNG----LEDRVHVLPGPVETVELP-EQVDAI 153 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-THHHHHHHHHHTT----CTTTEEEEESCTTTCCCS-SCEEEE
T ss_pred cCCCEEEEeCCCccHHHHHHHHhC--CCEEEEEeChH-HHHHHHHHHHHcC----CCceEEEEeeeeeeecCC-ccccEE
Confidence 378999999999999999888864 35899999986 8899999999886 467899999999864433 789999
Q ss_pred EecCCC---------CchHHHHHhhcccCcEEEE
Q psy7829 212 YYGGCV---------SEVPSRVLNQLKKGGRILA 236 (511)
Q Consensus 212 ~~~~~~---------~~~~~~~~~~LkpgG~l~~ 236 (511)
++...- ..+.....++|||||.++-
T Consensus 154 vsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 154 VSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp ECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred EeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 984321 1233556799999999863
No 212
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.18 E-value=4.9e-11 Score=118.95 Aligned_cols=105 Identities=19% Similarity=0.127 Sum_probs=83.5
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCC-CeEEEEccCCCCCC----CCC
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSG-RVRIVEADAREGYL----PEA 206 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~-~v~~~~~d~~~~~~----~~~ 206 (511)
.++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.|++|++.++ ..+ +++|+++|+.+... ...
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~n~----~~~~~v~~~~~D~~~~l~~~~~~~~ 284 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEANH----LDMANHQLVVMDVFDYFKYARRHHL 284 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHHTT----CCCTTEEEEESCHHHHHHHHHHTTC
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcC----CCccceEEEECCHHHHHHHHHHhCC
Confidence 578899999999999999999853 3479999999999999999999875 223 89999999865221 135
Q ss_pred CccEEEecCCCC-----c----------hHHHHHhhcccCcEEEEEEccCC
Q psy7829 207 PYDVIYYGGCVS-----E----------VPSRVLNQLKKGGRILAPIGPMD 242 (511)
Q Consensus 207 ~fD~I~~~~~~~-----~----------~~~~~~~~LkpgG~l~~~~~~~~ 242 (511)
+||+|+++++.. . +...+.+.|+|||.+++......
T Consensus 285 ~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 285 TYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp CEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 899999987763 1 22456799999999999876443
No 213
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.17 E-value=1.4e-10 Score=109.26 Aligned_cols=134 Identities=22% Similarity=0.274 Sum_probs=97.6
Q ss_pred CCCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---cccc-ccccccc
Q psy7829 354 PSSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---STNH-IDLIANE 429 (511)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---~~~~-v~~i~~d 429 (511)
+..+..+..++.. +.+.++.+|||+|||+|.++..+++.++|.++|+++|+++++++.+++++ +..+ ++++.+|
T Consensus 76 ~~~~~~~~~i~~~--~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d 153 (255)
T 3mb5_A 76 IVHPKDAALIVAY--AGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKD 153 (255)
T ss_dssp CCCHHHHHHHHHH--TTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSC
T ss_pred cccHhHHHHHHHh--hCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECc
Confidence 3466777777776 78889999999999999999999999767799999999999888887776 3444 8888888
Q ss_pred cccccc-ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHhcC--CCceEE
Q psy7829 430 TIEIIP-HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL---EHMMDIAIESIANIS--TNHIDL 499 (511)
Q Consensus 430 ~~~~l~-~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~~~--~~~i~~ 499 (511)
..+.++ ..+|.++.+.. .+-.+...+.+.|+|+|.++.. ..-.+...+.+.+.+ +..++.
T Consensus 154 ~~~~~~~~~~D~v~~~~~----------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~~~ 219 (255)
T 3mb5_A 154 IYEGIEEENVDHVILDLP----------QPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRT 219 (255)
T ss_dssp GGGCCCCCSEEEEEECSS----------CGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCCEE
T ss_pred hhhccCCCCcCEEEECCC----------CHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccccEE
Confidence 765443 23555544322 1233457788899999998876 444455566666666 544444
No 214
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.17 E-value=2.2e-10 Score=109.38 Aligned_cols=107 Identities=18% Similarity=0.205 Sum_probs=78.3
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeC-CHHHHHHHHHHHhccCCCcCCC-----CCeEEEEccCCCCC---
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEH-IPELIEASLRNISKGNKDLLDS-----GRVRIVEADAREGY--- 202 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~-~~~~~~~a~~~~~~~~~~~~~~-----~~v~~~~~d~~~~~--- 202 (511)
.++.+|||+|||+|.++..+++.. ..+|+++|+ ++.+++.|++++..+.....+. +++++...|..+..
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~--~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 155 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG--ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSL 155 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT--CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcC--CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHH
Confidence 578899999999999999888863 358999999 8999999999994321000012 37888877654321
Q ss_pred C---CCCCccEEEecCCCCc------hHHHHHhhcc---c--CcEEEEEEcc
Q psy7829 203 L---PEAPYDVIYYGGCVSE------VPSRVLNQLK---K--GGRILAPIGP 240 (511)
Q Consensus 203 ~---~~~~fD~I~~~~~~~~------~~~~~~~~Lk---p--gG~l~~~~~~ 240 (511)
. ..++||+|++..++.+ +.+.+.++|+ | ||.+++.+.+
T Consensus 156 ~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 156 QRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTH 207 (281)
T ss_dssp HHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC
T ss_pred HhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEe
Confidence 1 2468999998776654 3478899999 9 9998875543
No 215
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.17 E-value=4.6e-11 Score=115.39 Aligned_cols=106 Identities=17% Similarity=0.115 Sum_probs=82.5
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC-CCCCCccE
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY-LPEAPYDV 210 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~ 210 (511)
.++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++.....+ +..++++++.+|+.+.. ...++||+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~-~~~~rv~~~~~D~~~~l~~~~~~fD~ 184 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCG-FSHPKLDLFCGDGFEFLKNHKNEFDV 184 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGG-GGCTTEEEECSCHHHHHHHCTTCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccc-cCCCCEEEEEChHHHHHHhcCCCceE
Confidence 456899999999999999999874 5689999999999999999998653100 12468999999986422 13478999
Q ss_pred EEecCCC----------CchHHHHHhhcccCcEEEEEEc
Q psy7829 211 IYYGGCV----------SEVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 211 I~~~~~~----------~~~~~~~~~~LkpgG~l~~~~~ 239 (511)
|+++... ..+.+.+.+.|+|||.+++..+
T Consensus 185 Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 185 IITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE 223 (314)
T ss_dssp EEECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECC
Confidence 9987642 3456889999999999998653
No 216
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.16 E-value=5.2e-11 Score=115.42 Aligned_cols=107 Identities=24% Similarity=0.256 Sum_probs=83.2
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC-CCCCCccE
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY-LPEAPYDV 210 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~ 210 (511)
.++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++...+.+.+..++++++.+|+.+.. ...++||+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV 154 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccE
Confidence 466899999999999999999874 5678999999999999999987641100001468999999986522 12478999
Q ss_pred EEecCCCCc-------------hHHHHHhhcccCcEEEEEEc
Q psy7829 211 IYYGGCVSE-------------VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 211 I~~~~~~~~-------------~~~~~~~~LkpgG~l~~~~~ 239 (511)
|+++...+. +.+.+.+.|||||.+++..+
T Consensus 155 Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 155 VIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 999876543 34789999999999998654
No 217
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.16 E-value=1.9e-10 Score=112.61 Aligned_cols=98 Identities=17% Similarity=0.133 Sum_probs=83.0
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
+.++.+|||+|||+|.++.. ++ . ..+|+++|+|+.+++.|++|++.++ ..++++++++|+.+.. ++||+
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~-~--~~~V~~vD~s~~ai~~a~~n~~~n~----l~~~v~~~~~D~~~~~---~~fD~ 261 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CK-N--AKKIYAIDINPHAIELLKKNIKLNK----LEHKIIPILSDVREVD---VKGNR 261 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TT-T--SSEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEESCGGGCC---CCEEE
T ss_pred cCCCCEEEEccCccCHHHHh-cc-C--CCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEECChHHhc---CCCcE
Confidence 56889999999999999999 77 2 5689999999999999999999875 2358999999998754 78999
Q ss_pred EEecCCCC--chHHHHHhhcccCcEEEEEEc
Q psy7829 211 IYYGGCVS--EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 211 I~~~~~~~--~~~~~~~~~LkpgG~l~~~~~ 239 (511)
|+++.+.. .+...+.+.|+|||.+++...
T Consensus 262 Vi~dpP~~~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 262 VIMNLPKFAHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp EEECCTTTGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCcHhHHHHHHHHHHHcCCCCEEEEEEe
Confidence 99986643 466889999999999988543
No 218
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.15 E-value=1.2e-10 Score=106.99 Aligned_cols=89 Identities=21% Similarity=0.292 Sum_probs=73.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEEE
Q psy7829 133 DGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVIY 212 (511)
Q Consensus 133 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~ 212 (511)
++.+|||+|||+|.++..+++. +++|+++.+++.++++ +++++++|+.......++||+|+
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~------------~~~~~~~d~~~~~~~~~~fD~v~ 107 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR------------GVFVLKGTAENLPLKDESFDFAL 107 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT------------TCEEEECBTTBCCSCTTCEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc------------CCEEEEcccccCCCCCCCeeEEE
Confidence 4889999999999998877543 8999999999999875 37899999876544557899999
Q ss_pred ecCCCCch------HHHHHhhcccCcEEEEEEcc
Q psy7829 213 YGGCVSEV------PSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 213 ~~~~~~~~------~~~~~~~LkpgG~l~~~~~~ 240 (511)
+..+++++ ++++.+.|+|||.+++....
T Consensus 108 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 108 MVTTICFVDDPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp EESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 99887654 47889999999999997553
No 219
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.15 E-value=6.1e-11 Score=118.04 Aligned_cols=100 Identities=17% Similarity=0.100 Sum_probs=78.7
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC-CCCCcc
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL-PEAPYD 209 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD 209 (511)
.++|.+|||+|||+|.++..+++.. . .|+++|+|+.+++.|++|++.++. . .++.++|+.+... ..+.||
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~g-a--~V~avDis~~al~~a~~n~~~ng~-----~-~~~~~~D~~~~l~~~~~~fD 282 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARKG-A--YALAVDKDLEALGVLDQAALRLGL-----R-VDIRHGEALPTLRGLEGPFH 282 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHHTC-----C-CEEEESCHHHHHHTCCCCEE
T ss_pred hcCCCeEEEcccchhHHHHHHHHcC-C--eEEEEECCHHHHHHHHHHHHHhCC-----C-CcEEEccHHHHHHHhcCCCC
Confidence 4569999999999999999999863 3 499999999999999999998752 2 3566889865321 124499
Q ss_pred EEEecCCC---------------CchHHHHHhhcccCcEEEEEEc
Q psy7829 210 VIYYGGCV---------------SEVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 210 ~I~~~~~~---------------~~~~~~~~~~LkpgG~l~~~~~ 239 (511)
+|+++++. ..+...+.+.|||||.|++...
T Consensus 283 ~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 283 HVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp EEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 99999886 2344678899999999996443
No 220
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.15 E-value=1.1e-10 Score=104.65 Aligned_cols=93 Identities=20% Similarity=0.267 Sum_probs=72.0
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC-------
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL------- 203 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------- 203 (511)
++++.+|||+|||+|.++..+++. .++|+|+|+++.. ..++++++++|+.+...
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~----------------~~~~v~~~~~D~~~~~~~~~~~~~ 83 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME----------------EIAGVRFIRCDIFKETIFDDIDRA 83 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC----------------CCTTCEEEECCTTSSSHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc----------------cCCCeEEEEccccCHHHHHHHHHH
Confidence 568999999999999999999987 5689999999741 23479999999876321
Q ss_pred -C---CCCccEEEecCCCC-----------------chHHHHHhhcccCcEEEEEEccCC
Q psy7829 204 -P---EAPYDVIYYGGCVS-----------------EVPSRVLNQLKKGGRILAPIGPMD 242 (511)
Q Consensus 204 -~---~~~fD~I~~~~~~~-----------------~~~~~~~~~LkpgG~l~~~~~~~~ 242 (511)
. .++||+|+++.+.. .+++.+.++|||||.|++.+....
T Consensus 84 ~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~ 143 (191)
T 3dou_A 84 LREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD 143 (191)
T ss_dssp HHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred hhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCC
Confidence 0 04899999986542 123567899999999999776443
No 221
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.13 E-value=4.4e-10 Score=113.96 Aligned_cols=128 Identities=20% Similarity=0.265 Sum_probs=93.2
Q ss_pred CcccccCCCcccc-----hhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHH
Q psy7829 103 DVSASLGYAGVMN-----APNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRN 177 (511)
Q Consensus 103 ~~~~~~~~~~~~~-----~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~ 177 (511)
+..+.+..+..+. ...+...+++.+. ..++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|++|
T Consensus 253 g~~~~~~~~~f~q~n~~~~e~l~~~~~~~l~--~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n 327 (433)
T 1uwv_A 253 GLRLTFSPRDFIQVNAGVNQKMVARALEWLD--VQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQN 327 (433)
T ss_dssp TEEEECCSSSCCCSBHHHHHHHHHHHHHHHT--CCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECcccccccCHHHHHHHHHHHHHhhc--CCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHH
Confidence 4445555444443 1224444555554 567889999999999999999987 35799999999999999999
Q ss_pred HhccCCCcCCCCCeEEEEccCCCCCC----CCCCccEEEecCCCCchH---HHHHhhcccCcEEEEEEccC
Q psy7829 178 ISKGNKDLLDSGRVRIVEADAREGYL----PEAPYDVIYYGGCVSEVP---SRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 178 ~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD~I~~~~~~~~~~---~~~~~~LkpgG~l~~~~~~~ 241 (511)
+..++ .+|++|+++|+.+... ..++||+|+++++..... +.+ ..++|++.+++++.+.
T Consensus 328 ~~~~~-----~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~~~~~~~l-~~~~p~~ivyvsc~p~ 392 (433)
T 1uwv_A 328 ARLNG-----LQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQI-IKLEPIRIVYVSCNPA 392 (433)
T ss_dssp HHHTT-----CCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCCHHHHHHH-HHHCCSEEEEEESCHH
T ss_pred HHHcC-----CCceEEEECCHHHHhhhhhhhcCCCCEEEECCCCccHHHHHHHH-HhcCCCeEEEEECChH
Confidence 98864 4589999999986432 236799999998875443 222 2368999998877643
No 222
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.13 E-value=5.5e-11 Score=119.38 Aligned_cols=104 Identities=17% Similarity=0.145 Sum_probs=84.4
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCC-CCCeEEEEccCCCCCC----CCC
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLD-SGRVRIVEADAREGYL----PEA 206 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~----~~~ 206 (511)
.++.+|||+|||+|.++..+++.. ..+|+++|+++.+++.|++|++.++ . .++++++++|+.+... ...
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ng----l~~~~v~~~~~D~~~~~~~~~~~~~ 292 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNK----LDLSKAEFVRDDVFKLLRTYRDRGE 292 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTT----CCGGGEEEEESCHHHHHHHHHHTTC
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcC----CCccceEEEECCHHHHHHHHHhcCC
Confidence 578899999999999999999863 4589999999999999999999875 2 2389999999875322 136
Q ss_pred CccEEEecCCCC---------------chHHHHHhhcccCcEEEEEEccC
Q psy7829 207 PYDVIYYGGCVS---------------EVPSRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 207 ~fD~I~~~~~~~---------------~~~~~~~~~LkpgG~l~~~~~~~ 241 (511)
+||+|+++++.. .+...+.+.|+|||.++++..+.
T Consensus 293 ~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 293 KFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp CEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 899999998761 23467889999999999976543
No 223
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.12 E-value=5e-11 Score=119.04 Aligned_cols=100 Identities=24% Similarity=0.265 Sum_probs=83.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC----CCCCc
Q psy7829 133 DGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL----PEAPY 208 (511)
Q Consensus 133 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~f 208 (511)
++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|++|++.++ .++++++++|+.+... ...+|
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~-----~~~~~~~~~d~~~~~~~~~~~~~~f 280 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNG-----LGNVRVLEANAFDLLRRLEKEGERF 280 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTT-----CTTEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcC-----CCCceEEECCHHHHHHHHHhcCCCe
Confidence 7889999999999999999987 3579999999999999999999874 4569999999875322 14689
Q ss_pred cEEEecCCCC---------------chHHHHHhhcccCcEEEEEEcc
Q psy7829 209 DVIYYGGCVS---------------EVPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 209 D~I~~~~~~~---------------~~~~~~~~~LkpgG~l~~~~~~ 240 (511)
|+|+++++.. .+...+.+.|+|||.+++....
T Consensus 281 D~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 281 DLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp EEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred eEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 9999998762 2446788999999999987654
No 224
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.12 E-value=5.9e-10 Score=111.02 Aligned_cols=120 Identities=13% Similarity=-0.010 Sum_probs=91.1
Q ss_pred cchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCC------------------------------------
Q psy7829 114 MNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGP------------------------------------ 157 (511)
Q Consensus 114 ~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~------------------------------------ 157 (511)
...+.+.+.++.+.. ..++..|||.+||+|.+++.++.....
T Consensus 184 pl~e~lAa~ll~l~~--~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~ 261 (393)
T 3k0b_A 184 PIKETMAAALVLLTS--WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYD 261 (393)
T ss_dssp SCCHHHHHHHHHHSC--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTT
T ss_pred CCcHHHHHHHHHHhC--CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhccc
Confidence 335566666666654 678889999999999999988876521
Q ss_pred -CceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEEEecCCCCc----------hHHHHHh
Q psy7829 158 -TGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVIYYGGCVSE----------VPSRVLN 226 (511)
Q Consensus 158 -~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~----------~~~~~~~ 226 (511)
..+|+|+|+++.+++.|++|+..+| ..++++++++|+.+...+ .+||+|++++++.. +...+.+
T Consensus 262 ~~~~V~GvDid~~al~~Ar~Na~~~g----l~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~ 336 (393)
T 3k0b_A 262 QPLNIIGGDIDARLIEIAKQNAVEAG----LGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGI 336 (393)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTT----CTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCHHHHHHHHHHHHHcC----CCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHH
Confidence 1569999999999999999999876 344699999999875443 58999999999731 2234445
Q ss_pred hccc--CcEEEEEEcc
Q psy7829 227 QLKK--GGRILAPIGP 240 (511)
Q Consensus 227 ~Lkp--gG~l~~~~~~ 240 (511)
.||+ ||.+++....
T Consensus 337 ~lk~~~g~~~~iit~~ 352 (393)
T 3k0b_A 337 VYKRMPTWSVYVLTSY 352 (393)
T ss_dssp HHHTCTTCEEEEEECC
T ss_pred HHhcCCCCEEEEEECC
Confidence 5555 9998886653
No 225
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.12 E-value=1.4e-10 Score=106.96 Aligned_cols=94 Identities=27% Similarity=0.414 Sum_probs=76.8
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCC--CCCCCCCcc
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADARE--GYLPEAPYD 209 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~fD 209 (511)
.++.+|||+|||+|..+..+++. + .+++++|+++.+++.++++. .+++.+|+.. ...+.++||
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~~~~~~~~~~~------------~~~~~~d~~~~~~~~~~~~fD 95 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFPEAAEQAKEKL------------DHVVLGDIETMDMPYEEEQFD 95 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSHHHHHHHHTTS------------SEEEESCTTTCCCCSCTTCEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhC------------CcEEEcchhhcCCCCCCCccC
Confidence 57889999999999999999987 3 68999999999999887652 3678888875 222347899
Q ss_pred EEEecCCCCch------HHHHHhhcccCcEEEEEEcc
Q psy7829 210 VIYYGGCVSEV------PSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 210 ~I~~~~~~~~~------~~~~~~~LkpgG~l~~~~~~ 240 (511)
+|++..+++++ .+++.+.|||||.+++.+..
T Consensus 96 ~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 96 CVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp EEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred EEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 99999887654 37788999999999997653
No 226
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.12 E-value=1.6e-11 Score=113.53 Aligned_cols=111 Identities=20% Similarity=0.201 Sum_probs=70.9
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEE-ccCC
Q psy7829 121 ADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVE-ADAR 199 (511)
Q Consensus 121 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~-~d~~ 199 (511)
..+++.+. ...++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.++++..+... ....++.+.. .|+.
T Consensus 26 ~~~L~~~~-~~~~g~~VLDiGcGtG~~t~~la~~g--~~~V~gvDis~~ml~~a~~~~~~~~~--~~~~~~~~~~~~~~~ 100 (232)
T 3opn_A 26 EKALKEFH-LEINGKTCLDIGSSTGGFTDVMLQNG--AKLVYALDVGTNQLAWKIRSDERVVV--MEQFNFRNAVLADFE 100 (232)
T ss_dssp HHHHHHTT-CCCTTCEEEEETCTTSHHHHHHHHTT--CSEEEEECSSCCCCCHHHHTCTTEEE--ECSCCGGGCCGGGCC
T ss_pred HHHHHHcC-CCCCCCEEEEEccCCCHHHHHHHhcC--CCEEEEEcCCHHHHHHHHHhCccccc--cccceEEEeCHhHcC
Confidence 34455543 12357799999999999999999873 34899999999999998775433110 0011232222 2222
Q ss_pred CCCCCCCCccEEEecCCCCchHHHHHhhcccCcEEEEEE
Q psy7829 200 EGYLPEAPYDVIYYGGCVSEVPSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 200 ~~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~l~~~~ 238 (511)
...+....||+++++. ..++.++.++|||||.+++.+
T Consensus 101 ~~~~d~~~~D~v~~~l--~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 101 QGRPSFTSIDVSFISL--DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp SCCCSEEEECCSSSCG--GGTHHHHHHHSCTTCEEEEEE
T ss_pred cCCCCEEEEEEEhhhH--HHHHHHHHHhccCCCEEEEEE
Confidence 2111223455554432 566799999999999999854
No 227
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.12 E-value=1.6e-10 Score=107.81 Aligned_cols=117 Identities=25% Similarity=0.292 Sum_probs=83.4
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCc--cHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEc
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGS--GYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEA 196 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~--G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 196 (511)
+..+++..|.. -....+|||||||+ +..+..+++...|.++|+++|.|+.|++.|++++... ...+++|+++
T Consensus 65 fl~rav~~l~~-~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~-----~~~~~~~v~a 138 (277)
T 3giw_A 65 WMNRAVAHLAK-EAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST-----PEGRTAYVEA 138 (277)
T ss_dssp HHHHHHHHHHH-TSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC-----SSSEEEEEEC
T ss_pred HHHHHHHHhcc-ccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC-----CCCcEEEEEe
Confidence 44455555541 12336899999997 4445556665558899999999999999999998653 2347999999
Q ss_pred cCCCCC---C-C--CCCcc-----EEEecCCCCchH---------HHHHhhcccCcEEEEEEccC
Q psy7829 197 DAREGY---L-P--EAPYD-----VIYYGGCVSEVP---------SRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 197 d~~~~~---~-~--~~~fD-----~I~~~~~~~~~~---------~~~~~~LkpgG~l~~~~~~~ 241 (511)
|+.+.. . + .+.|| .|+++..+|++. +++.+.|+|||+|++.....
T Consensus 139 D~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 139 DMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp CTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred cccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 997631 0 0 13455 588888887653 56788899999999976543
No 228
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.11 E-value=6e-11 Score=115.87 Aligned_cols=92 Identities=18% Similarity=0.340 Sum_probs=72.4
Q ss_pred CCCCCEEEEEcCC------ccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCC
Q psy7829 131 LVDGAKVLDLGSG------SGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLP 204 (511)
Q Consensus 131 ~~~~~~vLDiG~G------~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 204 (511)
..++.+||||||| +|..+..+++.+.++++|+|+|+|+.+. . ..++++|+++|+.+....
T Consensus 214 ~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~------~~~rI~fv~GDa~dlpf~ 279 (419)
T 3sso_A 214 RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V------DELRIRTIQGDQNDAEFL 279 (419)
T ss_dssp TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G------CBTTEEEEECCTTCHHHH
T ss_pred cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h------cCCCcEEEEecccccchh
Confidence 3467899999999 7788888887765789999999999972 1 235899999999763222
Q ss_pred ------CCCccEEEecCCCCch------HHHHHhhcccCcEEEEE
Q psy7829 205 ------EAPYDVIYYGGCVSEV------PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 205 ------~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~l~~~ 237 (511)
.++||+|+++.. +.. ++++++.|||||++++.
T Consensus 280 ~~l~~~d~sFDlVisdgs-H~~~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 280 DRIARRYGPFDIVIDDGS-HINAHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHHHHCCEEEEEECSC-CCHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhhhcccCCccEEEECCc-ccchhHHHHHHHHHHhcCCCeEEEEE
Confidence 478999999764 332 47889999999999985
No 229
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.11 E-value=1.1e-10 Score=109.88 Aligned_cols=102 Identities=9% Similarity=-0.011 Sum_probs=81.2
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEE
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVI 211 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I 211 (511)
..+.+|||||||+|..+..+++. + .+|+++|+++.+++.|++++..... .+..++++++.+|+.+.. ++||+|
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~-~~~~~rv~~~~~D~~~~~---~~fD~I 143 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHE-VKNNKNFTHAKQLLDLDI---KKYDLI 143 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHH-HHTCTTEEEESSGGGSCC---CCEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhcc-ccCCCeEEEEechHHHHH---hhCCEE
Confidence 35679999999999999999887 3 7899999999999999987643100 012468999999987644 789999
Q ss_pred EecCCCCc-hHHHHHhhcccCcEEEEEEcc
Q psy7829 212 YYGGCVSE-VPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 212 ~~~~~~~~-~~~~~~~~LkpgG~l~~~~~~ 240 (511)
+++..-+. +.+.+.+.|||||.+++..+.
T Consensus 144 i~d~~dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 144 FCLQEPDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp EESSCCCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EECCCChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 99865433 468999999999999986543
No 230
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.11 E-value=4.1e-10 Score=113.33 Aligned_cols=111 Identities=24% Similarity=0.254 Sum_probs=85.5
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccC
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADA 198 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 198 (511)
....+.+.+.+ +.++.+|||+|||+|.++..+++.. .+|+++|+++.+++.|++|+..++ .+ ++|+++|+
T Consensus 277 ~~e~l~~~~~~-~~~~~~VLDlgcG~G~~sl~la~~~---~~V~gvD~s~~ai~~A~~n~~~ng-----l~-v~~~~~d~ 346 (425)
T 2jjq_A 277 QAVNLVRKVSE-LVEGEKILDMYSGVGTFGIYLAKRG---FNVKGFDSNEFAIEMARRNVEINN-----VD-AEFEVASD 346 (425)
T ss_dssp HHHHHHHHHHH-HCCSSEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHT-----CC-EEEEECCT
T ss_pred HHHHHHHHhhc-cCCCCEEEEeeccchHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcC-----Cc-EEEEECCh
Confidence 34444444433 5678899999999999999999863 479999999999999999998864 34 99999999
Q ss_pred CCCCCCCCCccEEEecCCCCchH---HHHHhhcccCcEEEEEEccC
Q psy7829 199 REGYLPEAPYDVIYYGGCVSEVP---SRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 199 ~~~~~~~~~fD~I~~~~~~~~~~---~~~~~~LkpgG~l~~~~~~~ 241 (511)
.+... .+||+|+++++..... .+....|+|+|.+++++.+.
T Consensus 347 ~~~~~--~~fD~Vv~dPPr~g~~~~~~~~l~~l~p~givyvsc~p~ 390 (425)
T 2jjq_A 347 REVSV--KGFDTVIVDPPRAGLHPRLVKRLNREKPGVIVYVSCNPE 390 (425)
T ss_dssp TTCCC--TTCSEEEECCCTTCSCHHHHHHHHHHCCSEEEEEESCHH
T ss_pred HHcCc--cCCCEEEEcCCccchHHHHHHHHHhcCCCcEEEEECChH
Confidence 87543 2799999998864322 23334589999999987543
No 231
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.11 E-value=1.2e-10 Score=114.84 Aligned_cols=97 Identities=18% Similarity=0.183 Sum_probs=76.0
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
+.++.+|||||||+|..+..+++.+ +..+++++|+ +.++. ++++...+ ..++++++.+|+.+..+ +||+
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~--~~~~~~~~----~~~~v~~~~~d~~~~~p---~~D~ 250 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDR-AEVVA--RHRLDAPD----VAGRWKVVEGDFLREVP---HADV 250 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEEC-HHHHT--TCCCCCGG----GTTSEEEEECCTTTCCC---CCSE
T ss_pred ccCCceEEEECCccCHHHHHHHHHC-CCCEEEEecC-HHHhh--cccccccC----CCCCeEEEecCCCCCCC---CCcE
Confidence 5678899999999999999999987 7889999999 45544 33333222 24579999999974332 7999
Q ss_pred EEecCCCCch--------HHHHHhhcccCcEEEEEE
Q psy7829 211 IYYGGCVSEV--------PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 211 I~~~~~~~~~--------~~~~~~~LkpgG~l~~~~ 238 (511)
|++...++++ ++++++.|||||++++..
T Consensus 251 v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 251 HVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred EEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999888643 477899999999999853
No 232
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.11 E-value=1.1e-10 Score=111.46 Aligned_cols=106 Identities=21% Similarity=0.180 Sum_probs=82.9
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC-CCCCccE
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL-PEAPYDV 210 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~ 210 (511)
.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++...+.+ +..++++++.+|+.+... ..++||+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~-~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCG-YEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGG-GGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccc-cCCCcEEEEECChHHHHHhCCCCceE
Confidence 467899999999999999999864 5679999999999999999998653210 124689999999864221 2478999
Q ss_pred EEecCCCC----------chHHHHHhhcccCcEEEEEEc
Q psy7829 211 IYYGGCVS----------EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 211 I~~~~~~~----------~~~~~~~~~LkpgG~l~~~~~ 239 (511)
|+++...+ .+.+.+.+.|||||.+++...
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 99975432 345789999999999998654
No 233
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.11 E-value=1.1e-10 Score=117.17 Aligned_cols=103 Identities=22% Similarity=0.253 Sum_probs=83.3
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC----CCC
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL----PEA 206 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~ 206 (511)
.+++.+|||+|||+|.++..+++. ...+|+++|+++.+++.|++|+..++ ..++++++++|+.+... ..+
T Consensus 215 ~~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~----~~~~v~~~~~d~~~~~~~~~~~~~ 288 (396)
T 2as0_A 215 VQPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNG----VEDRMKFIVGSAFEEMEKLQKKGE 288 (396)
T ss_dssp CCTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTT----CGGGEEEEESCHHHHHHHHHHTTC
T ss_pred hhCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcC----CCccceEEECCHHHHHHHHHhhCC
Confidence 347899999999999999999986 24589999999999999999999875 22389999999865322 146
Q ss_pred CccEEEecCCCC---------------chHHHHHhhcccCcEEEEEEc
Q psy7829 207 PYDVIYYGGCVS---------------EVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 207 ~fD~I~~~~~~~---------------~~~~~~~~~LkpgG~l~~~~~ 239 (511)
+||+|+++++.. .+...+.+.|+|||.+++...
T Consensus 289 ~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 289 KFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp CEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 899999998762 234678899999999988654
No 234
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.11 E-value=3.9e-10 Score=110.95 Aligned_cols=101 Identities=17% Similarity=0.176 Sum_probs=83.2
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCC----ceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCC
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPT----GKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAP 207 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~----~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 207 (511)
.++.+|||+|||+|.++..+++..... .+++|+|+++.+++.|+.++...+ . ++.++++|...... .+.
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g-----~-~~~i~~~D~l~~~~-~~~ 201 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR-----Q-KMTLLHQDGLANLL-VDP 201 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT-----C-CCEEEESCTTSCCC-CCC
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC-----C-CceEEECCCCCccc-cCC
Confidence 467899999999999999999887322 789999999999999999988754 2 68999999876443 478
Q ss_pred ccEEEecCCCCc------------------------hHHHHHhhcccCcEEEEEEc
Q psy7829 208 YDVIYYGGCVSE------------------------VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 208 fD~I~~~~~~~~------------------------~~~~~~~~LkpgG~l~~~~~ 239 (511)
||+|++++++.. +...+.+.|||||++++.+.
T Consensus 202 fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 202 VDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp EEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 999999998532 35778899999999998763
No 235
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.10 E-value=3.8e-10 Score=106.32 Aligned_cols=130 Identities=19% Similarity=0.233 Sum_probs=95.4
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc----cccccccccc
Q psy7829 353 GPSSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI----STNHIDLIAN 428 (511)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~----~~~~v~~i~~ 428 (511)
.+..+..+..++.. +.+.++.+|||+|||+|.++..+++.++|.++|+++|+++++++.+++++ +..+++++.+
T Consensus 78 ~~~~~~~~~~~~~~--~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~ 155 (258)
T 2pwy_A 78 TPTYPKDASAMVTL--LDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLG 155 (258)
T ss_dssp CCCCHHHHHHHHHH--TTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEES
T ss_pred ccccchHHHHHHHH--cCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 34567778788877 78889999999999999999999998767799999999999998888775 4457888888
Q ss_pred ccccc-cc-ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHhcCC
Q psy7829 429 ETIEI-IP-HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL---EHMMDIAIESIANIST 494 (511)
Q Consensus 429 d~~~~-l~-~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~~~~ 494 (511)
|..+. ++ ..+|.++.+ +. ....+...+.+.++|+|.++.+ ..-+....+.+.+.|+
T Consensus 156 d~~~~~~~~~~~D~v~~~---------~~-~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf 216 (258)
T 2pwy_A 156 KLEEAELEEAAYDGVALD---------LM-EPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPF 216 (258)
T ss_dssp CGGGCCCCTTCEEEEEEE---------SS-CGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTE
T ss_pred chhhcCCCCCCcCEEEEC---------Cc-CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC
Confidence 76554 22 234544432 22 2335567788899999998877 3344455555655555
No 236
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.10 E-value=1.7e-10 Score=109.08 Aligned_cols=95 Identities=19% Similarity=0.182 Sum_probs=69.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEE-EccCCCCC---CCCCCc
Q psy7829 133 DGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIV-EADAREGY---LPEAPY 208 (511)
Q Consensus 133 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~-~~d~~~~~---~~~~~f 208 (511)
++.+|||+|||+|.++..+++.. ..+|+|+|+++.|++.+.++- +++... ..|+.... .+..+|
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~g--a~~V~aVDvs~~mL~~a~r~~----------~rv~~~~~~ni~~l~~~~l~~~~f 152 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNG--AKLVYAVDVGTNQLVWKLRQD----------DRVRSMEQYNFRYAEPVDFTEGLP 152 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CSEEEEECSSSSCSCHHHHTC----------TTEEEECSCCGGGCCGGGCTTCCC
T ss_pred cccEEEecCCCccHHHHHHHhCC--CCEEEEEECCHHHHHHHHHhC----------cccceecccCceecchhhCCCCCC
Confidence 57899999999999999998873 468999999999998854431 123222 22332111 122459
Q ss_pred cEEEecCCCCc---hHHHHHhhcccCcEEEEEEc
Q psy7829 209 DVIYYGGCVSE---VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 209 D~I~~~~~~~~---~~~~~~~~LkpgG~l~~~~~ 239 (511)
|+|+++..+.. ++.++.++|||||.+++.+.
T Consensus 153 D~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~lvk 186 (291)
T 3hp7_A 153 SFASIDVSFISLNLILPALAKILVDGGQVVALVK 186 (291)
T ss_dssp SEEEECCSSSCGGGTHHHHHHHSCTTCEEEEEEC
T ss_pred CEEEEEeeHhhHHHHHHHHHHHcCcCCEEEEEEC
Confidence 99999887754 45899999999999999654
No 237
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.09 E-value=3.7e-10 Score=101.62 Aligned_cols=95 Identities=26% Similarity=0.305 Sum_probs=72.9
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCC--------ceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEE-EccCCCC
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPT--------GKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIV-EADAREG 201 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~--------~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~-~~d~~~~ 201 (511)
++++.+|||+|||+|.++..+++..++. ++|+++|+++.. ...+++++ .+|+...
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----------------~~~~~~~~~~~d~~~~ 83 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----------------PLEGATFLCPADVTDP 83 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----------------CCTTCEEECSCCTTSH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----------------cCCCCeEEEeccCCCH
Confidence 5789999999999999999999997543 789999999841 12468888 8887642
Q ss_pred C--------CCCCCccEEEecCCCC-----------------chHHHHHhhcccCcEEEEEEccC
Q psy7829 202 Y--------LPEAPYDVIYYGGCVS-----------------EVPSRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 202 ~--------~~~~~fD~I~~~~~~~-----------------~~~~~~~~~LkpgG~l~~~~~~~ 241 (511)
. .+.++||+|+++.+++ .+.+++.+.|||||.+++.+...
T Consensus 84 ~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 84 RTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 1 1235799999976543 23467889999999999976543
No 238
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.09 E-value=1.3e-09 Score=107.94 Aligned_cols=119 Identities=11% Similarity=-0.018 Sum_probs=90.9
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCC-------------------------------------C
Q psy7829 116 APNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGP-------------------------------------T 158 (511)
Q Consensus 116 ~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~-------------------------------------~ 158 (511)
.+.+.+.++.+.. ..++..+||.+||+|.+.+.++..... .
T Consensus 179 ~e~LAaall~l~~--~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 256 (384)
T 3ldg_A 179 KENMAAAIILLSN--WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQ 256 (384)
T ss_dssp CHHHHHHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred cHHHHHHHHHHhC--CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCC
Confidence 4556666666554 678899999999999999988876421 1
Q ss_pred ceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEEEecCCCCc----------hHHHHHhhc
Q psy7829 159 GKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVIYYGGCVSE----------VPSRVLNQL 228 (511)
Q Consensus 159 ~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~----------~~~~~~~~L 228 (511)
.+++|+|+++.+++.|++|+..+| ..+++++.++|+.+...+ .+||+|++|+++.. +...+.+.|
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~g----l~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~l 331 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVG----LEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETF 331 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcC----CCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHH
Confidence 569999999999999999999876 345699999999875443 58999999999731 224455566
Q ss_pred cc--CcEEEEEEccC
Q psy7829 229 KK--GGRILAPIGPM 241 (511)
Q Consensus 229 kp--gG~l~~~~~~~ 241 (511)
|+ ||.+++.+...
T Consensus 332 k~~~g~~~~iit~~~ 346 (384)
T 3ldg_A 332 APLKTWSQFILTNDT 346 (384)
T ss_dssp TTCTTSEEEEEESCT
T ss_pred hhCCCcEEEEEECCH
Confidence 65 99998866543
No 239
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.09 E-value=6.6e-10 Score=110.52 Aligned_cols=118 Identities=14% Similarity=-0.007 Sum_probs=89.4
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhC-------------------------------------CC
Q psy7829 116 APNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVG-------------------------------------PT 158 (511)
Q Consensus 116 ~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~-------------------------------------~~ 158 (511)
.+.+.+.++.... ..++.+|||.+||+|.+++.++.... +.
T Consensus 180 ~e~lAa~ll~~~~--~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 180 RETLAAGLIYLTP--WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp CHHHHHHHHHTSC--CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred cHHHHHHHHHhhC--CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 4456666665554 66788999999999999999887641 12
Q ss_pred ceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEEEecCCCCc----------hHHHHHhhc
Q psy7829 159 GKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVIYYGGCVSE----------VPSRVLNQL 228 (511)
Q Consensus 159 ~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~----------~~~~~~~~L 228 (511)
.+|+|+|+++.+++.|++|+..+| ..++++|.++|+.+...+ .+||+|++++++.. +...+.+.|
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~g----l~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~l 332 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAG----VDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAF 332 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHT----CGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcC----CCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHH
Confidence 579999999999999999999876 234799999999875443 68999999999842 124455556
Q ss_pred cc--CcEEEEEEcc
Q psy7829 229 KK--GGRILAPIGP 240 (511)
Q Consensus 229 kp--gG~l~~~~~~ 240 (511)
|+ |+.+++.+..
T Consensus 333 k~~~g~~~~iit~~ 346 (385)
T 3ldu_A 333 RKLKNWSYYLITSY 346 (385)
T ss_dssp HTSBSCEEEEEESC
T ss_pred hhCCCCEEEEEECC
Confidence 55 8888886653
No 240
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.09 E-value=2.2e-10 Score=104.59 Aligned_cols=99 Identities=17% Similarity=0.135 Sum_probs=83.6
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCcc
Q psy7829 130 HLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYD 209 (511)
Q Consensus 130 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 209 (511)
.+.+..+|||||||+|-++..++... +..+++++|+++.+++.+++++..+|. +.++.+.|.....++ ++||
T Consensus 129 ~i~~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~------~~~~~v~D~~~~~p~-~~~D 200 (281)
T 3lcv_B 129 HLPRPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNV------PHRTNVADLLEDRLD-EPAD 200 (281)
T ss_dssp GSCCCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTC------CEEEEECCTTTSCCC-SCCS
T ss_pred ccCCCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCC------CceEEEeeecccCCC-CCcc
Confidence 45567899999999999999998865 789999999999999999999988652 488999998876544 7899
Q ss_pred EEEecCCCCchH-------HHHHhhcccCcEEEE
Q psy7829 210 VIYYGGCVSEVP-------SRVLNQLKKGGRILA 236 (511)
Q Consensus 210 ~I~~~~~~~~~~-------~~~~~~LkpgG~l~~ 236 (511)
++++.-.++++. -++.+.|+|+|.++-
T Consensus 201 vaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 201 VTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVT 234 (281)
T ss_dssp EEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEE
T ss_pred hHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEe
Confidence 999998887664 368899999988763
No 241
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.08 E-value=5.3e-10 Score=105.54 Aligned_cols=100 Identities=19% Similarity=0.164 Sum_probs=74.7
Q ss_pred cCCCCCCEEEEEeccccHHH-HHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---ccccccccccccccccccchhhhhc
Q psy7829 369 LNLHRGAKVLEIGSGSGYLA-TLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETIEIIPHILDLCYLN 444 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~-~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~~~l~~~~d~i~~~ 444 (511)
+.++++++|||||||+|.++ +.+|+.. +++|+++|+++++++.|++++. ..+++++++|+.+..+..||.++..
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~--ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~ 195 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVY--GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVA 195 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTT--CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEEC
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEEC
Confidence 78899999999999999766 5555443 4899999999999998887753 4679999998877544456655432
Q ss_pred ccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 445 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 445 l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.. ......+...+.+.|+|||+++..
T Consensus 196 a~--------~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 196 AL--------AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp TT--------CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CC--------ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 11 112335677888999999999866
No 242
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.08 E-value=1.8e-09 Score=97.76 Aligned_cols=126 Identities=16% Similarity=0.212 Sum_probs=87.4
Q ss_pred CCCHHHH-HHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---ccc-ccccccc
Q psy7829 354 PSSERSI-AHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---STN-HIDLIAN 428 (511)
Q Consensus 354 ~~~~~~~-~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---~~~-~v~~i~~ 428 (511)
+.+++.+ ..++.. +.+.++.+|||+|||+|.+++.+|+. + .+|+++|+++++++.++++. +.. +++++.+
T Consensus 37 ~~~~~~~~~~~l~~--l~~~~~~~vLDlGcG~G~~~~~la~~-~--~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~ 111 (204)
T 3njr_A 37 QITKSPMRALTLAA--LAPRRGELLWDIGGGSGSVSVEWCLA-G--GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQG 111 (204)
T ss_dssp CCCCHHHHHHHHHH--HCCCTTCEEEEETCTTCHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred CCCcHHHHHHHHHh--cCCCCCCEEEEecCCCCHHHHHHHHc-C--CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeC
Confidence 3444444 344444 78889999999999999999999987 3 89999999999988877765 445 7888888
Q ss_pred cccccccc--cchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHhcCC
Q psy7829 429 ETIEIIPH--ILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL---EHMMDIAIESIANIST 494 (511)
Q Consensus 429 d~~~~l~~--~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~~~~ 494 (511)
|..+.++. .+|.++.. .+...- +...+.+.|+|+|.++.. ..-+....+.+++.+.
T Consensus 112 d~~~~~~~~~~~D~v~~~---------~~~~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~ 172 (204)
T 3njr_A 112 TAPAALADLPLPEAVFIG---------GGGSQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGG 172 (204)
T ss_dssp CTTGGGTTSCCCSEEEEC---------SCCCHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCS
T ss_pred chhhhcccCCCCCEEEEC---------CcccHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCC
Confidence 87664332 23333221 111222 667778889999998876 4445555566666554
No 243
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.08 E-value=4.2e-10 Score=120.38 Aligned_cols=104 Identities=18% Similarity=0.178 Sum_probs=84.5
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC-CCCCccE
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL-PEAPYDV 210 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~ 210 (511)
.++.+|||+|||+|.++..++... ..+|+++|+|+.+++.|++|++.++. ..++++++++|+.+... ..++||+
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~g--a~~V~aVD~s~~al~~a~~N~~~ngl---~~~~v~~i~~D~~~~l~~~~~~fD~ 612 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGG--ARSTTTVDMSRTYLEWAERNLRLNGL---TGRAHRLIQADCLAWLREANEQFDL 612 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTC---CSTTEEEEESCHHHHHHHCCCCEEE
T ss_pred cCCCcEEEeeechhHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCC---CccceEEEecCHHHHHHhcCCCccE
Confidence 368899999999999999998853 35799999999999999999998762 22589999999875221 2368999
Q ss_pred EEecCCCC-----------------chHHHHHhhcccCcEEEEEEcc
Q psy7829 211 IYYGGCVS-----------------EVPSRVLNQLKKGGRILAPIGP 240 (511)
Q Consensus 211 I~~~~~~~-----------------~~~~~~~~~LkpgG~l~~~~~~ 240 (511)
|+++++.. .+...+.+.|+|||.|++++..
T Consensus 613 Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 613 IFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp EEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 99998751 1246788999999999988765
No 244
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.07 E-value=2.4e-10 Score=113.53 Aligned_cols=97 Identities=21% Similarity=0.186 Sum_probs=80.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCC---CCC----
Q psy7829 133 DGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGY---LPE---- 205 (511)
Q Consensus 133 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~~~---- 205 (511)
.+.+|||+|||+|.+++.+|+.. .+|+++|+++.+++.|++|++.++ .+|++|+.+|+.+.. ...
T Consensus 213 ~~~~vLDl~cG~G~~~l~la~~~---~~V~gvd~~~~ai~~a~~n~~~ng-----~~~v~~~~~d~~~~~~~~~~~~~~~ 284 (369)
T 3bt7_A 213 SKGDLLELYCGNGNFSLALARNF---DRVLATEIAKPSVAAAQYNIAANH-----IDNVQIIRMAAEEFTQAMNGVREFN 284 (369)
T ss_dssp CCSEEEEESCTTSHHHHHHGGGS---SEEEEECCCHHHHHHHHHHHHHTT-----CCSEEEECCCSHHHHHHHSSCCCCT
T ss_pred CCCEEEEccCCCCHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcC-----CCceEEEECCHHHHHHHHhhccccc
Confidence 36789999999999999998853 479999999999999999999875 468999999986421 111
Q ss_pred ---------CCccEEEecCCCCchHHHHHhhcccCcEEEEE
Q psy7829 206 ---------APYDVIYYGGCVSEVPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 206 ---------~~fD~I~~~~~~~~~~~~~~~~LkpgG~l~~~ 237 (511)
..||+|+++++...+...+.+.|+++|++++.
T Consensus 285 ~l~~~~~~~~~fD~Vv~dPPr~g~~~~~~~~l~~~g~ivyv 325 (369)
T 3bt7_A 285 RLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPRILYI 325 (369)
T ss_dssp TGGGSCGGGCCEEEEEECCCTTCCCHHHHHHHTTSSEEEEE
T ss_pred cccccccccCCCCEEEECcCccccHHHHHHHHhCCCEEEEE
Confidence 37999999998877778888889898888764
No 245
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.07 E-value=3.5e-10 Score=103.83 Aligned_cols=115 Identities=16% Similarity=0.206 Sum_probs=75.0
Q ss_pred CHHHHHHHHHHhh-cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc-ccccccccccccccc
Q psy7829 356 SERSIAHILDLCY-LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI-STNHIDLIANETIEI 433 (511)
Q Consensus 356 ~~~~~~~~~~~~~-~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~-~~~~v~~i~~d~~~~ 433 (511)
..+..+.++.... +.+++|.+|||+|||+|+.+..+|+.++++|+|+|+|+++.+++...+.. ...|+.++.+|+...
T Consensus 58 ~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~ 137 (232)
T 3id6_C 58 RSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFP 137 (232)
T ss_dssp TCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCG
T ss_pred HHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccc
Confidence 3355666666522 45889999999999999999999999988899999999987754322111 125788888875432
Q ss_pred -----ccccchhhhhcccCCcEEEEEcCCccHHHH-HHHHHhCCCcEEEEh
Q psy7829 434 -----IPHILDLCYLNLHRGAKVLEIGSGSGYLAT-LMAHLVGPTGHVTGL 478 (511)
Q Consensus 434 -----l~~~~d~i~~~l~~~~~vLD~~~g~g~~~~-~l~~~l~~~g~v~~~ 478 (511)
+...+|.++.+... .....+.. .+.+.|+|+|+++..
T Consensus 138 ~~~~~~~~~~D~I~~d~a~--------~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 138 QSYKSVVENVDVLYVDIAQ--------PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp GGTTTTCCCEEEEEECCCC--------TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhccccceEEEEecCCC--------hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 12345554443321 11111222 233489999998765
No 246
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.07 E-value=7.3e-10 Score=105.75 Aligned_cols=112 Identities=24% Similarity=0.321 Sum_probs=85.0
Q ss_pred CCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc------ccccccccc
Q psy7829 355 SSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS------TNHIDLIAN 428 (511)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~------~~~v~~i~~ 428 (511)
..+..+..++.. +.+.++.+|||+|||+|.++..+++.++|.++|+++|+++++++.+++++. ..+++++.+
T Consensus 83 ~~~~~~~~i~~~--~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~ 160 (280)
T 1i9g_A 83 IYPKDAAQIVHE--GDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS 160 (280)
T ss_dssp CCHHHHHHHHHH--TTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS
T ss_pred ecHHHHHHHHHH--cCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEEC
Confidence 456777777776 788999999999999999999999987677999999999999988887763 457888888
Q ss_pred cccccc--cccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 429 ETIEII--PHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 429 d~~~~l--~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
|..+.. +..+|.++.+.. .+-.+...+.+.|+|+|.++.+
T Consensus 161 d~~~~~~~~~~~D~v~~~~~----------~~~~~l~~~~~~L~pgG~l~~~ 202 (280)
T 1i9g_A 161 DLADSELPDGSVDRAVLDML----------APWEVLDAVSRLLVAGGVLMVY 202 (280)
T ss_dssp CGGGCCCCTTCEEEEEEESS----------CGGGGHHHHHHHEEEEEEEEEE
T ss_pred chHhcCCCCCceeEEEECCc----------CHHHHHHHHHHhCCCCCEEEEE
Confidence 765532 223444443222 2335567788899999998876
No 247
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.06 E-value=4.1e-10 Score=108.31 Aligned_cols=105 Identities=16% Similarity=0.210 Sum_probs=80.4
Q ss_pred chhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEE
Q psy7829 115 NAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIV 194 (511)
Q Consensus 115 ~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 194 (511)
..+.+...+++.+. +.++.+|||+|||+|.++..+++.. .+|+++|+++.+++.+++++...+ .++++++
T Consensus 26 ~~~~i~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~La~~~---~~v~~vDi~~~~~~~a~~~~~~~~-----~~~v~~~ 95 (299)
T 2h1r_A 26 KNPGILDKIIYAAK--IKSSDIVLEIGCGTGNLTVKLLPLA---KKVITIDIDSRMISEVKKRCLYEG-----YNNLEVY 95 (299)
T ss_dssp CCHHHHHHHHHHHC--CCTTCEEEEECCTTSTTHHHHTTTS---SEEEEECSCHHHHHHHHHHHHHTT-----CCCEEC-
T ss_pred cCHHHHHHHHHhcC--CCCcCEEEEEcCcCcHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcC-----CCceEEE
Confidence 46778888888876 6788999999999999999998863 479999999999999999987643 4689999
Q ss_pred EccCCCCCCCCCCccEEEecCCCCchHHHHHhhcccC
Q psy7829 195 EADAREGYLPEAPYDVIYYGGCVSEVPSRVLNQLKKG 231 (511)
Q Consensus 195 ~~d~~~~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg 231 (511)
++|+..... .+||+|+++.+++.....+.++|+..
T Consensus 96 ~~D~~~~~~--~~~D~Vv~n~py~~~~~~~~~ll~~~ 130 (299)
T 2h1r_A 96 EGDAIKTVF--PKFDVCTANIPYKISSPLIFKLISHR 130 (299)
T ss_dssp ---CCSSCC--CCCSEEEEECCGGGHHHHHHHHHHCS
T ss_pred ECchhhCCc--ccCCEEEEcCCcccccHHHHHHHhcC
Confidence 999876433 47999999988765554455555443
No 248
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.05 E-value=6.9e-10 Score=105.78 Aligned_cols=133 Identities=15% Similarity=0.272 Sum_probs=95.3
Q ss_pred CCCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-ccccccccc
Q psy7829 354 PSSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NHIDLIANE 429 (511)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~v~~i~~d 429 (511)
+..+..+..++.. +.+.++.+|||+|||+|.+++.+++.++|.++|+++|+++++++.+++++. . .+++++.+|
T Consensus 95 ~~~~~~~~~i~~~--~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 172 (277)
T 1o54_A 95 IVYPKDSSFIAMM--LDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD 172 (277)
T ss_dssp CCCHHHHHHHHHH--TTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC
T ss_pred ccCHHHHHHHHHH--hCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECC
Confidence 3456777777776 788899999999999999999999987677999999999999888877764 2 567888887
Q ss_pred cccccc-ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHhcCCCceE
Q psy7829 430 TIEIIP-HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL---EHMMDIAIESIANISTNHID 498 (511)
Q Consensus 430 ~~~~l~-~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~~~~~~i~ 498 (511)
..+.++ ..+|.++.+.. .+-.+...+.+.|+|+|.++.. ..-+....+.+.+.|+..++
T Consensus 173 ~~~~~~~~~~D~V~~~~~----------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~ 235 (277)
T 1o54_A 173 ISEGFDEKDVDALFLDVP----------DPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIRIE 235 (277)
T ss_dssp GGGCCSCCSEEEEEECCS----------CGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEE
T ss_pred HHHcccCCccCEEEECCc----------CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeE
Confidence 665543 23555544322 1224457778889999998877 33444555556555553333
No 249
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.05 E-value=5.1e-09 Score=95.00 Aligned_cols=109 Identities=16% Similarity=0.134 Sum_probs=80.9
Q ss_pred hhHHHHHHHHHHhh-cCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEE
Q psy7829 116 APNQIADAAENLKL-HLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIV 194 (511)
Q Consensus 116 ~p~~~~~~~~~l~~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 194 (511)
.+.+...++..+.. ...++.+|||+|||+|.++..+++.. ..+|+++|+++.+++.+++++..++ . +++++
T Consensus 31 ~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~-----~-~~~~~ 102 (207)
T 1wy7_A 31 PGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLG--AKEVICVEVDKEAVDVLIENLGEFK-----G-KFKVF 102 (207)
T ss_dssp CHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHTGGGT-----T-SEEEE
T ss_pred chHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcC-----C-CEEEE
Confidence 34455555554432 13478899999999999999999873 3479999999999999999988754 2 79999
Q ss_pred EccCCCCCCCCCCccEEEecCCCCch--------HHHHHhhcccCcEEEEEE
Q psy7829 195 EADAREGYLPEAPYDVIYYGGCVSEV--------PSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 195 ~~d~~~~~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~l~~~~ 238 (511)
++|+.+. + ++||+|+++.+++.. .+.+.+.+ | .+++..
T Consensus 103 ~~d~~~~-~--~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~-~~~~~~ 148 (207)
T 1wy7_A 103 IGDVSEF-N--SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--D-VVYSIH 148 (207)
T ss_dssp ESCGGGC-C--CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--S-EEEEEE
T ss_pred ECchHHc-C--CCCCEEEEcCCCccccCCchHHHHHHHHHhc--C-cEEEEE
Confidence 9998763 2 489999999886432 35566666 4 444433
No 250
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.05 E-value=2.9e-09 Score=94.89 Aligned_cols=98 Identities=20% Similarity=0.171 Sum_probs=77.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCC--CCCeEEEEccCCCC-------
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLD--SGRVRIVEADAREG------- 201 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~--~~~v~~~~~d~~~~------- 201 (511)
+.+..+|||+|| |+.++.+|+. ++++|+++|.+++..+.|+++++++| . .++|+++.+|+.+.
T Consensus 28 l~~a~~VLEiGt--GySTl~lA~~--~~g~VvtvE~d~~~~~~ar~~l~~~g----~~~~~~I~~~~gda~~~~~wg~p~ 99 (202)
T 3cvo_A 28 YEEAEVILEYGS--GGSTVVAAEL--PGKHVTSVESDRAWARMMKAWLAANP----PAEGTEVNIVWTDIGPTGDWGHPV 99 (202)
T ss_dssp HHHCSEEEEESC--SHHHHHHHTS--TTCEEEEEESCHHHHHHHHHHHHHSC----CCTTCEEEEEECCCSSBCGGGCBS
T ss_pred hhCCCEEEEECc--hHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHcC----CCCCCceEEEEeCchhhhcccccc
Confidence 346789999998 5888888884 36899999999999999999999875 3 56899999997542
Q ss_pred -------C----------CCCCCccEEEecCCCC-chHHHHHhhcccCcEEEE
Q psy7829 202 -------Y----------LPEAPYDVIYYGGCVS-EVPSRVLNQLKKGGRILA 236 (511)
Q Consensus 202 -------~----------~~~~~fD~I~~~~~~~-~~~~~~~~~LkpgG~l~~ 236 (511)
+ ...++||+|++++... .....+.+.|+|||++++
T Consensus 100 ~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 100 SDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFRVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp SSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSHHHHHHHHHHHCSSCEEEEE
T ss_pred cchhhhhHHHHhhhhhccccCCCCCEEEEeCCCchhHHHHHHHhcCCCeEEEE
Confidence 1 1237899999998753 233457799999999976
No 251
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.04 E-value=2.6e-10 Score=104.71 Aligned_cols=99 Identities=8% Similarity=0.118 Sum_probs=72.7
Q ss_pred CCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c--ccccccccccccccc----ccchhhh
Q psy7829 372 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T--NHIDLIANETIEIIP----HILDLCY 442 (511)
Q Consensus 372 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~--~~v~~i~~d~~~~l~----~~~d~i~ 442 (511)
+++.+|||||||+|+.++.+|+.++++++|+++|+++++++.+++++. . ++++++.+|+.+.++ ..||.++
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~ 134 (221)
T 3dr5_A 55 NGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVF 134 (221)
T ss_dssp TTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEE
T ss_pred CCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEE
Confidence 345599999999999999999988667999999999999888877764 3 478999998766543 3455554
Q ss_pred hcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 443 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 443 ~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+.... ..-.+...+.+.|+|||.++.-
T Consensus 135 ~d~~~~--------~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 135 GQVSPM--------DLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp ECCCTT--------THHHHHHHHHHHEEEEEEEEET
T ss_pred EcCcHH--------HHHHHHHHHHHHcCCCcEEEEe
Confidence 432111 1122456677889999988863
No 252
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.04 E-value=1.1e-09 Score=96.84 Aligned_cols=130 Identities=11% Similarity=0.063 Sum_probs=85.4
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cc-ccccccc
Q psy7829 353 GPSSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TN-HIDLIAN 428 (511)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~-~v~~i~~ 428 (511)
|..+++.+...+.. .+.+.++.+|||+|||+|.++..+++.. +..+|+++|+++++++.+++++. .. ++ ++.+
T Consensus 6 g~~t~~~~~~~~~~-~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~ 82 (178)
T 3hm2_A 6 GQLTKQHVRALAIS-ALAPKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQ 82 (178)
T ss_dssp CCSHHHHHHHHHHH-HHCCCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEEC
T ss_pred CcccHHHHHHHHHH-HhcccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEec
Confidence 44555655443322 3678899999999999999999999886 56899999999998888877654 33 56 6666
Q ss_pred ccccccc---ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHhcCC
Q psy7829 429 ETIEIIP---HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL---EHMMDIAIESIANIST 494 (511)
Q Consensus 429 d~~~~l~---~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~~~~ 494 (511)
|..+.++ ..+|.++.... .....+...+.+.++|+|.++.. ..-.....+.++..+.
T Consensus 83 d~~~~~~~~~~~~D~i~~~~~---------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~ 145 (178)
T 3hm2_A 83 GAPRAFDDVPDNPDVIFIGGG---------LTAPGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGG 145 (178)
T ss_dssp CTTGGGGGCCSCCSEEEECC----------TTCTTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCC
T ss_pred chHhhhhccCCCCCEEEECCc---------ccHHHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCC
Confidence 6544333 23444332211 11234667888889999998865 3334444455555443
No 253
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.04 E-value=9.9e-10 Score=108.38 Aligned_cols=98 Identities=21% Similarity=0.278 Sum_probs=82.1
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
+.+..+|+|||||+|..+..+++++ |+.+++..|. |.+++.|++++... ..++|+++.+|+.+.+. ..+|+
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~-----~~~rv~~~~gD~~~~~~--~~~D~ 247 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQ-----EEEQIDFQEGDFFKDPL--PEADL 247 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC-------CCSEEEEESCTTTSCC--CCCSE
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhc-----ccCceeeecCccccCCC--CCceE
Confidence 4567799999999999999999997 8889999997 88999999987653 46799999999986543 35799
Q ss_pred EEecCCCCc--------hHHHHHhhcccCcEEEEE
Q psy7829 211 IYYGGCVSE--------VPSRVLNQLKKGGRILAP 237 (511)
Q Consensus 211 I~~~~~~~~--------~~~~~~~~LkpgG~l~~~ 237 (511)
|++...++. +++++++.|+|||++++.
T Consensus 248 ~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 248 YILARVLHDWADGKCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred EEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 999988864 347899999999999884
No 254
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.03 E-value=1.4e-09 Score=98.14 Aligned_cols=103 Identities=21% Similarity=0.214 Sum_probs=74.2
Q ss_pred HHHHHHHHHhh-cCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEcc
Q psy7829 119 QIADAAENLKL-HLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEAD 197 (511)
Q Consensus 119 ~~~~~~~~l~~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 197 (511)
+...++..+.. ...++.+|||+|||+|.++..+++. +..+|+++|+++.+++.|++++. +++++++|
T Consensus 36 ~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~----------~~~~~~~d 103 (200)
T 1ne2_A 36 TAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG----------GVNFMVAD 103 (200)
T ss_dssp HHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT----------TSEEEECC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC----------CCEEEECc
Confidence 44444444431 2457889999999999999999886 24579999999999999998853 58999999
Q ss_pred CCCCCCCCCCccEEEecCCCCchH--------HHHHhhcccCcEEEEEEc
Q psy7829 198 AREGYLPEAPYDVIYYGGCVSEVP--------SRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 198 ~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~l~~~~~ 239 (511)
+.+. + ++||+|+++.++++.. +++.+.+ |.+++...
T Consensus 104 ~~~~-~--~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~---g~~~~~~~ 147 (200)
T 1ne2_A 104 VSEI-S--GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS---MWIYSIGN 147 (200)
T ss_dssp GGGC-C--CCEEEEEECCCC-------CHHHHHHHHHHE---EEEEEEEE
T ss_pred HHHC-C--CCeeEEEECCCchhccCchhHHHHHHHHHhc---CcEEEEEc
Confidence 8763 2 6899999999875542 4455555 55555443
No 255
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.03 E-value=4.3e-10 Score=107.04 Aligned_cols=125 Identities=16% Similarity=0.223 Sum_probs=85.7
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc----ccccccccccccccc
Q psy7829 358 RSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI----STNHIDLIANETIEI 433 (511)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~----~~~~v~~i~~d~~~~ 433 (511)
..+..++.. +.+.++.+|||+|||+|.++..+++.++|..+|+++|+++++++.+++++ +..+++++.+|..+.
T Consensus 97 ~~~~~~~~~--~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~ 174 (275)
T 1yb2_A 97 IDASYIIMR--CGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF 174 (275)
T ss_dssp -----------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC
T ss_pred hhHHHHHHH--cCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc
Confidence 444455555 67889999999999999999999998656689999999999998888776 345788888886654
Q ss_pred cc-ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHhcCC
Q psy7829 434 IP-HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL---EHMMDIAIESIANIST 494 (511)
Q Consensus 434 l~-~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~~~~ 494 (511)
++ ..+|.++.+... .-.+...+.+.++|+|.++.. ..-.+...+.+.+.|+
T Consensus 175 ~~~~~fD~Vi~~~~~----------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf 229 (275)
T 1yb2_A 175 ISDQMYDAVIADIPD----------PWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGM 229 (275)
T ss_dssp CCSCCEEEEEECCSC----------GGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTE
T ss_pred CcCCCccEEEEcCcC----------HHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCC
Confidence 33 245655543321 224457788889999998876 3344555556666665
No 256
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.02 E-value=2e-09 Score=97.47 Aligned_cols=93 Identities=12% Similarity=-0.007 Sum_probs=78.1
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccEE
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDVI 211 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I 211 (511)
.++.+|||+|||+|-++..+. +..+++++|+++.+++.+++++..++ .+..+..+|....+++ ++||+|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g------~~~~~~v~D~~~~~~~-~~~Dvv 172 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKD------WDFTFALQDVLCAPPA-EAGDLA 172 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTT------CEEEEEECCTTTSCCC-CBCSEE
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcC------CCceEEEeecccCCCC-CCcchH
Confidence 567899999999999998877 56789999999999999999988753 4789999999876654 689999
Q ss_pred EecCCCCchH-------HHHHhhcccCcEEE
Q psy7829 212 YYGGCVSEVP-------SRVLNQLKKGGRIL 235 (511)
Q Consensus 212 ~~~~~~~~~~-------~~~~~~LkpgG~l~ 235 (511)
++.-.++++. .++.+.|+++|.++
T Consensus 173 Lllk~lh~LE~q~~~~~~~ll~aL~~~~vvV 203 (253)
T 3frh_A 173 LIFKLLPLLEREQAGSAMALLQSLNTPRMAV 203 (253)
T ss_dssp EEESCHHHHHHHSTTHHHHHHHHCBCSEEEE
T ss_pred HHHHHHHHhhhhchhhHHHHHHHhcCCCEEE
Confidence 9987776553 47888999997665
No 257
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.01 E-value=3.2e-10 Score=119.12 Aligned_cols=98 Identities=18% Similarity=0.212 Sum_probs=80.2
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCC--CCCCCCc
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREG--YLPEAPY 208 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~f 208 (511)
+..+.+|||||||.|.++..||+.. +.|+|||.++.+++.|+.++.+.| ..+++|.++++.+. ....++|
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~g---a~V~giD~~~~~i~~a~~~a~~~~-----~~~~~~~~~~~~~~~~~~~~~~f 135 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASKG---ATIVGIDFQQENINVCRALAEENP-----DFAAEFRVGRIEEVIAALEEGEF 135 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTST-----TSEEEEEECCHHHHHHHCCTTSC
T ss_pred cCCCCeEEEECCCCcHHHHHHHhCC---CEEEEECCCHHHHHHHHHHHHhcC-----CCceEEEECCHHHHhhhccCCCc
Confidence 4567899999999999999999974 479999999999999999988753 34799999998753 1234789
Q ss_pred cEEEecCCCCchH--------HHHHhhcccCcEEEE
Q psy7829 209 DVIYYGGCVSEVP--------SRVLNQLKKGGRILA 236 (511)
Q Consensus 209 D~I~~~~~~~~~~--------~~~~~~LkpgG~l~~ 236 (511)
|+|++..+++|++ ..+.+.|+++|..++
T Consensus 136 D~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 136 DLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVI 171 (569)
T ss_dssp SEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEE
T ss_pred cEEEECcchhcCCCHHHHHHHHHHHHHhccccceee
Confidence 9999999998875 356677888877665
No 258
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.01 E-value=1.8e-10 Score=108.44 Aligned_cols=101 Identities=16% Similarity=0.005 Sum_probs=71.0
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEE--EccCCCCCCCCCC
Q psy7829 130 HLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIV--EADAREGYLPEAP 207 (511)
Q Consensus 130 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~ 207 (511)
.++++.+|||+|||+|.++..+++. ++|+|+|+++ ++..++++..... ....++.++ ++|+.... .++
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~---~~~~~v~~~~~~~D~~~l~--~~~ 140 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITE---SYGWNIVKFKSRVDIHTLP--VER 140 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCC---BTTGGGEEEECSCCTTTSC--CCC
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhh---ccCCCeEEEecccCHhHCC--CCC
Confidence 3678999999999999999999886 4699999998 4322221100000 001268999 89987643 478
Q ss_pred ccEEEecCCCC------------chHHHHHhhcccCc--EEEEEEcc
Q psy7829 208 YDVIYYGGCVS------------EVPSRVLNQLKKGG--RILAPIGP 240 (511)
Q Consensus 208 fD~I~~~~~~~------------~~~~~~~~~LkpgG--~l~~~~~~ 240 (511)
||+|+++.+.. .++..+.++||||| .+++.+..
T Consensus 141 fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 141 TDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 99999986511 13466789999999 99886654
No 259
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.01 E-value=7.5e-10 Score=108.66 Aligned_cols=112 Identities=21% Similarity=0.312 Sum_probs=84.3
Q ss_pred CCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc--------------c
Q psy7829 355 SSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS--------------T 420 (511)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~--------------~ 420 (511)
..+..++.++.. +.+.++.+|||+|||+|++++.+++.++++++|+++|+++++++.+++++. .
T Consensus 89 ~~~~~~~~~l~~--l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~ 166 (336)
T 2b25_A 89 TFPKDINMILSM--MDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWP 166 (336)
T ss_dssp CCHHHHHHHHHH--HTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCC
T ss_pred cCHHHHHHHHHh--cCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccC
Confidence 456777778877 688899999999999999999999988788999999999999998887765 2
Q ss_pred cccccccccccccc----cccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 421 NHIDLIANETIEII----PHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 421 ~~v~~i~~d~~~~l----~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+++++.+|..+.. +..+|.++.+.. .+-.+...+.+.|+|+|.++..
T Consensus 167 ~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~----------~~~~~l~~~~~~LkpgG~lv~~ 218 (336)
T 2b25_A 167 DNVDFIHKDISGATEDIKSLTFDAVALDML----------NPHVTLPVFYPHLKHGGVCAVY 218 (336)
T ss_dssp CCEEEEESCTTCCC-------EEEEEECSS----------STTTTHHHHGGGEEEEEEEEEE
T ss_pred CceEEEECChHHcccccCCCCeeEEEECCC----------CHHHHHHHHHHhcCCCcEEEEE
Confidence 56888888765542 123454444322 1223456778889999998876
No 260
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.00 E-value=1.2e-09 Score=111.23 Aligned_cols=123 Identities=19% Similarity=0.170 Sum_probs=93.2
Q ss_pred CcccchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhC------------CCceEEEEeCCHHHHHHHHHHH
Q psy7829 111 AGVMNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVG------------PTGKVIGVEHIPELIEASLRNI 178 (511)
Q Consensus 111 ~~~~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~------------~~~~v~~iD~~~~~~~~a~~~~ 178 (511)
|...+.+.+...+++.+. ..++.+|||.|||+|.+...+++.+. ...+++|+|+++.+++.|+.++
T Consensus 151 G~fyTP~~v~~~mv~~l~--~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl 228 (445)
T 2okc_A 151 GQYFTPRPLIQAMVDCIN--PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNL 228 (445)
T ss_dssp GGGCCCHHHHHHHHHHHC--CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred CcccCcHHHHHHHHHHhC--CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHH
Confidence 333444456667777775 56788999999999999998887641 1356999999999999999998
Q ss_pred hccCCCcCCCCCeEEEEccCCCCCCCCCCccEEEecCCCCc-----------------------hHHHHHhhcccCcEEE
Q psy7829 179 SKGNKDLLDSGRVRIVEADAREGYLPEAPYDVIYYGGCVSE-----------------------VPSRVLNQLKKGGRIL 235 (511)
Q Consensus 179 ~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~-----------------------~~~~~~~~LkpgG~l~ 235 (511)
...|. ...++++.++|....... ..||+|++++|+.. +.+.+.+.|||||+++
T Consensus 229 ~l~g~---~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a 304 (445)
T 2okc_A 229 YLHGI---GTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAA 304 (445)
T ss_dssp HHTTC---CSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEE
T ss_pred HHhCC---CcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEE
Confidence 77541 112678899998764433 48999999988732 3478889999999998
Q ss_pred EEEc
Q psy7829 236 APIG 239 (511)
Q Consensus 236 ~~~~ 239 (511)
+.+.
T Consensus 305 ~V~p 308 (445)
T 2okc_A 305 VVLP 308 (445)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 8664
No 261
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.00 E-value=4.7e-10 Score=111.01 Aligned_cols=100 Identities=21% Similarity=0.145 Sum_probs=82.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhcc---------------CCCcCCCCCeEEEEcc
Q psy7829 133 DGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKG---------------NKDLLDSGRVRIVEAD 197 (511)
Q Consensus 133 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~---------------~~~~~~~~~v~~~~~d 197 (511)
++.+|||+|||+|..++.+++.. +..+|+++|+++.+++.+++|++.+ + ..+++++++|
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~-~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~g-----l~~i~v~~~D 120 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALET-PAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKG-----EKTIVINHDD 120 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHS-SCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEES-----SSEEEEEESC
T ss_pred CCCEEEECCCchhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccC-----CCceEEEcCc
Confidence 68899999999999999999986 4567999999999999999999987 4 2359999999
Q ss_pred CCCCCC-CCCCccEEEecCCCC--chHHHHHhhcccCcEEEEEE
Q psy7829 198 AREGYL-PEAPYDVIYYGGCVS--EVPSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 198 ~~~~~~-~~~~fD~I~~~~~~~--~~~~~~~~~LkpgG~l~~~~ 238 (511)
+..... ....||+|++++... .+.+.+.+.|||||.+++..
T Consensus 121 a~~~~~~~~~~fD~I~lDP~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 121 ANRLMAERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHHHSTTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhccCCCCEEEeCCCCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 864321 125799999887543 46688899999999888764
No 262
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.00 E-value=6.8e-11 Score=119.76 Aligned_cols=97 Identities=15% Similarity=0.164 Sum_probs=72.5
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCe-E-EEEccCCCCCCCCCCc
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRV-R-IVEADAREGYLPEAPY 208 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v-~-~~~~d~~~~~~~~~~f 208 (511)
+.++.+|||||||+|.++..+++.. .+|+|+|+|+.+++.|+++ + .+.. . +...+.......+++|
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~g---~~v~gvD~s~~~~~~a~~~----~-----~~~~~~~~~~~~~~~l~~~~~~f 172 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEAG---VRHLGFEPSSGVAAKAREK----G-----IRVRTDFFEKATADDVRRTEGPA 172 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHTT---CEEEEECCCHHHHHHHHTT----T-----CCEECSCCSHHHHHHHHHHHCCE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcC---CcEEEECCCHHHHHHHHHc----C-----CCcceeeechhhHhhcccCCCCE
Confidence 4578899999999999999999863 3799999999999998876 1 1111 1 1112221111224789
Q ss_pred cEEEecCCCCchH------HHHHhhcccCcEEEEEEc
Q psy7829 209 DVIYYGGCVSEVP------SRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 209 D~I~~~~~~~~~~------~~~~~~LkpgG~l~~~~~ 239 (511)
|+|++..+++++. +++.++|||||++++.+.
T Consensus 173 D~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 173 NVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp EEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9999999987763 789999999999999754
No 263
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.00 E-value=4.8e-10 Score=102.06 Aligned_cols=102 Identities=20% Similarity=0.246 Sum_probs=68.1
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-cccccccccccccc-----ccccchhhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-TNHIDLIANETIEI-----IPHILDLCY 442 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-~~~v~~i~~d~~~~-----l~~~~d~i~ 442 (511)
+.++++.+|||+|||+|..+..+++.++ +++|+|+|+++.+++...+... ..|+.++.+|.... .+..+|.++
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~ 131 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIY 131 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEE
Confidence 4567899999999999999999999885 6899999999886543322221 34677776665432 123455555
Q ss_pred hcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 443 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 443 ~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.++.... -...+...+++.|+|||.++..
T Consensus 132 ~~~~~~~-------~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 132 QDIAQKN-------QIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp ECCCSTT-------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EeccChh-------HHHHHHHHHHHHhCCCCEEEEE
Confidence 4421110 0111246778899999998775
No 264
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.99 E-value=1.4e-10 Score=109.73 Aligned_cols=100 Identities=15% Similarity=0.010 Sum_probs=70.7
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEE--EccCCCCCCCCCCc
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIV--EADAREGYLPEAPY 208 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~f 208 (511)
++++.+|||+|||+|.++..+++. ++|+|+|+++ ++..++++..... -...++.++ ++|+.... .++|
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~---~~~~~v~~~~~~~D~~~l~--~~~f 149 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVE---TFGWNLITFKSKVDVTKME--PFQA 149 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCC---CTTGGGEEEECSCCGGGCC--CCCC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhh---hcCCCeEEEeccCcHhhCC--CCCc
Confidence 568899999999999999999886 4699999998 5333322110000 011278999 89987633 4789
Q ss_pred cEEEecCCCC------------chHHHHHhhcccCc--EEEEEEcc
Q psy7829 209 DVIYYGGCVS------------EVPSRVLNQLKKGG--RILAPIGP 240 (511)
Q Consensus 209 D~I~~~~~~~------------~~~~~~~~~LkpgG--~l~~~~~~ 240 (511)
|+|+++.+.. .++..+.++||||| .+++.+..
T Consensus 150 D~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 150 DTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 9999986511 13466789999999 99886543
No 265
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.99 E-value=7.3e-10 Score=103.53 Aligned_cols=103 Identities=11% Similarity=0.123 Sum_probs=80.1
Q ss_pred cchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEE
Q psy7829 114 MNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRI 193 (511)
Q Consensus 114 ~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 193 (511)
+..+.+...+++.+. +.++.+|||||||+|.++..+++.. .+|+++|+++.+++.+++++.. .+++++
T Consensus 12 L~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~-------~~~v~~ 79 (255)
T 3tqs_A 12 LHDSFVLQKIVSAIH--PQKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQ-------QKNITI 79 (255)
T ss_dssp ECCHHHHHHHHHHHC--CCTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTT-------CTTEEE
T ss_pred ccCHHHHHHHHHhcC--CCCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhh-------CCCcEE
Confidence 446778888888886 7789999999999999999999874 5799999999999999999864 348999
Q ss_pred EEccCCCCCCC----CCCccEEEecCCCCchHHHHHhhcc
Q psy7829 194 VEADAREGYLP----EAPYDVIYYGGCVSEVPSRVLNQLK 229 (511)
Q Consensus 194 ~~~d~~~~~~~----~~~fD~I~~~~~~~~~~~~~~~~Lk 229 (511)
+++|+.+...+ .++|| |++|.++.--..-+.++|.
T Consensus 80 i~~D~~~~~~~~~~~~~~~~-vv~NlPY~is~~il~~ll~ 118 (255)
T 3tqs_A 80 YQNDALQFDFSSVKTDKPLR-VVGNLPYNISTPLLFHLFS 118 (255)
T ss_dssp EESCTTTCCGGGSCCSSCEE-EEEECCHHHHHHHHHHHHH
T ss_pred EEcchHhCCHHHhccCCCeE-EEecCCcccCHHHHHHHHh
Confidence 99999864321 25688 8888776433333445544
No 266
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.98 E-value=9.1e-10 Score=111.63 Aligned_cols=110 Identities=18% Similarity=0.208 Sum_probs=85.3
Q ss_pred cchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEE
Q psy7829 114 MNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRI 193 (511)
Q Consensus 114 ~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 193 (511)
.+.+.+...+++.+. ..++.+|||+|||+|.++..+++..++..+++|+|+++.+++.| .++++
T Consensus 22 ~TP~~l~~~~~~~~~--~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------------~~~~~ 85 (421)
T 2ih2_A 22 ETPPEVVDFMVSLAE--APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------------PWAEG 85 (421)
T ss_dssp CCCHHHHHHHHHHCC--CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------------TTEEE
T ss_pred eCCHHHHHHHHHhhc--cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------------CCCcE
Confidence 333456666777664 34567999999999999999998875567899999999988766 26899
Q ss_pred EEccCCCCCCCCCCccEEEecCCCC-----------------------------------chHHHHHhhcccCcEEEEEE
Q psy7829 194 VEADAREGYLPEAPYDVIYYGGCVS-----------------------------------EVPSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 194 ~~~d~~~~~~~~~~fD~I~~~~~~~-----------------------------------~~~~~~~~~LkpgG~l~~~~ 238 (511)
+++|+.... ..+.||+|++++++. .+.+.+.+.|+|||++++.+
T Consensus 86 ~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~ 164 (421)
T 2ih2_A 86 ILADFLLWE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVV 164 (421)
T ss_dssp EESCGGGCC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeCChhhcC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEE
Confidence 999987643 346899999987762 12356789999999999876
Q ss_pred cc
Q psy7829 239 GP 240 (511)
Q Consensus 239 ~~ 240 (511)
..
T Consensus 165 p~ 166 (421)
T 2ih2_A 165 PA 166 (421)
T ss_dssp EG
T ss_pred Ch
Confidence 54
No 267
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.97 E-value=6.3e-10 Score=104.65 Aligned_cols=148 Identities=17% Similarity=0.235 Sum_probs=101.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-cc
Q psy7829 347 GSAPDNGPSSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NH 422 (511)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~ 422 (511)
...+...|.++..+..++.. +.+.++.+|||||||+|..+..+++..+ .+|+++|+++.+++.++++.. . .+
T Consensus 12 ~~~~~~~~~~~~~~~~l~~~--~~~~~~~~VLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~ 87 (256)
T 1nkv_A 12 SEHRIHNPFTEEKYATLGRV--LRMKPGTRILDLGSGSGEMLCTWARDHG--ITGTGIDMSSLFTAQAKRRAEELGVSER 87 (256)
T ss_dssp SSCSSSSSCCHHHHHHHHHH--TCCCTTCEEEEETCTTCHHHHHHHHHTC--CEEEEEESCHHHHHHHHHHHHHTTCTTT
T ss_pred CCccccCCCCHHHHHHHHHh--cCCCCCCEEEEECCCCCHHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHhcCCCcc
Confidence 34455667888999888887 7888999999999999999999998874 799999999999988877654 2 36
Q ss_pred cccccccccccc-cccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh----------HHH----------
Q psy7829 423 IDLIANETIEII-PHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL----------EHM---------- 481 (511)
Q Consensus 423 v~~i~~d~~~~l-~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~----------~~m---------- 481 (511)
++++.+|..+.. +..+|.++.... +..-.+.......+.+.|+|+|.++.. ...
T Consensus 88 v~~~~~d~~~~~~~~~fD~V~~~~~-----~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (256)
T 1nkv_A 88 VHFIHNDAAGYVANEKCDVAACVGA-----TWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTS 162 (256)
T ss_dssp EEEEESCCTTCCCSSCEEEEEEESC-----GGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGG
T ss_pred eEEEECChHhCCcCCCCCEEEECCC-----hHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhccccc
Confidence 888887765432 234554433110 000113445567777888999988764 111
Q ss_pred ----HHHHHHHHHhcCCCceEEEech
Q psy7829 482 ----MDIAIESIANISTNHIDLIANE 503 (511)
Q Consensus 482 ----l~~a~~~~~~~~~~~i~~i~~d 503 (511)
.+...+.+++.|+..++++..+
T Consensus 163 ~~~~~~~~~~~l~~aGf~~~~~~~~~ 188 (256)
T 1nkv_A 163 DFLTLPGLVGAFDDLGYDVVEMVLAD 188 (256)
T ss_dssp GSCCHHHHHHHHHTTTBCCCEEEECC
T ss_pred ccCCHHHHHHHHHHCCCeeEEEEeCC
Confidence 1344566777787656655433
No 268
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.97 E-value=7.8e-10 Score=109.38 Aligned_cols=103 Identities=18% Similarity=0.048 Sum_probs=83.2
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCC-eEEEEccCCCCCC--CCCCc
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGR-VRIVEADAREGYL--PEAPY 208 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~-v~~~~~d~~~~~~--~~~~f 208 (511)
.++.+|||++||+|.+++.++...+...+|+++|+++.+++.+++|++.++ ..++ ++++++|+.+... ..+.|
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ng----l~~~~v~v~~~Da~~~l~~~~~~~f 126 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNN----IPEDRYEIHGMEANFFLRKEWGFGF 126 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTT----CCGGGEEEECSCHHHHHHSCCSSCE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhC----CCCceEEEEeCCHHHHHHHhhCCCC
Confidence 468899999999999999999975223689999999999999999999976 2334 9999999864221 13579
Q ss_pred cEEEecCCC--CchHHHHHhhcccCcEEEEEE
Q psy7829 209 DVIYYGGCV--SEVPSRVLNQLKKGGRILAPI 238 (511)
Q Consensus 209 D~I~~~~~~--~~~~~~~~~~LkpgG~l~~~~ 238 (511)
|+|++++.. ..+.+.+.+.|+|||.|+++.
T Consensus 127 D~V~lDP~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 127 DYVDLDPFGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEECCCcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 999999732 246688899999999998865
No 269
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.96 E-value=3.4e-10 Score=100.92 Aligned_cols=107 Identities=13% Similarity=0.118 Sum_probs=70.2
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---ccccccccccccc---cccccchhhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETIE---IIPHILDLCY 442 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~~---~l~~~~d~i~ 442 (511)
..++++.+|||+|||+|.++..+++. + ++|+|+|+++++++.++++.. ..++++++++... ..+..+|.++
T Consensus 18 ~~~~~~~~vLDiGcG~G~~~~~la~~-~--~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~ 94 (185)
T 3mti_A 18 EVLDDESIVVDATMGNGNDTAFLAGL-S--KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAI 94 (185)
T ss_dssp TTCCTTCEEEESCCTTSHHHHHHHTT-S--SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEE
T ss_pred HhCCCCCEEEEEcCCCCHHHHHHHHh-C--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEE
Confidence 46788999999999999999999987 3 899999999999988877764 4678888755433 2233455554
Q ss_pred hcccC---C-cEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 443 LNLHR---G-AKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 443 ~~l~~---~-~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.++.. + ..+....-..-.....+.+.|+|+|.++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 95 FNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp EEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 33210 0 000000000112235667889999998765
No 270
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.96 E-value=2.4e-09 Score=106.12 Aligned_cols=91 Identities=19% Similarity=0.231 Sum_probs=75.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
..+..+|||||||+|..+..+++.+ |..+++++|+ +.+++.|++ .++++|+.+|+.+..+ .+ |+
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~D~~~~~p-~~--D~ 262 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQ-----------FPGVTHVGGDMFKEVP-SG--DT 262 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTTCCC-CC--SE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhh-----------cCCeEEEeCCcCCCCC-CC--CE
Confidence 4567899999999999999999997 7889999999 888766542 2479999999987433 33 99
Q ss_pred EEecCCCCch--------HHHHHhhcccCcEEEEE
Q psy7829 211 IYYGGCVSEV--------PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 211 I~~~~~~~~~--------~~~~~~~LkpgG~l~~~ 237 (511)
|++...++++ ++++++.|||||++++.
T Consensus 263 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 263 ILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred EEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 9999888743 47899999999999884
No 271
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.96 E-value=4.9e-10 Score=105.46 Aligned_cols=104 Identities=13% Similarity=0.193 Sum_probs=71.7
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHhhcc----ccccccccccccccccccchhhhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVG-PTGHVTGLEHMMDIAIESIANIS----TNHIDLIANETIEIIPHILDLCYL 443 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~~v~~id~~~~~~~~~~~~~~----~~~v~~i~~d~~~~l~~~~d~i~~ 443 (511)
..+++|.+|||+|||+|..+..+++.++ ++.+|+|+|++++|++.+++++. ..+++++++|..+.-...+|.+..
T Consensus 66 ~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~ 145 (261)
T 4gek_A 66 RFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVL 145 (261)
T ss_dssp HHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEE
T ss_pred HhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccccccccee
Confidence 3578999999999999999999998864 45699999999999999888754 346888888765432222332222
Q ss_pred cccCCcEEEEEcCCc---cHHHHHHHHHhCCCcEEEEh
Q psy7829 444 NLHRGAKVLEIGSGS---GYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 444 ~l~~~~~vLD~~~g~---g~~~~~l~~~l~~~g~v~~~ 478 (511)
+.. +.. ... -.+...+++.|+|||.++..
T Consensus 146 ~~~-----l~~-~~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 146 NFT-----LQF-LEPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp ESC-----GGG-SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eee-----eee-cCchhHhHHHHHHHHHcCCCcEEEEE
Confidence 110 000 001 12356778889999988764
No 272
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.96 E-value=2e-09 Score=106.83 Aligned_cols=91 Identities=16% Similarity=0.298 Sum_probs=75.2
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
+.+..+|||||||+|..+..+++.+ |..+++++|+ +.+++.+++ .++++++.+|+.+..+ .+ |+
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~~p-~~--D~ 264 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPA-----------FSGVEHLGGDMFDGVP-KG--DA 264 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTTCCC-CC--SE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhh-----------cCCCEEEecCCCCCCC-CC--CE
Confidence 3467899999999999999999997 7889999999 888776542 2479999999987443 23 99
Q ss_pred EEecCCCCch--------HHHHHhhcccCcEEEEE
Q psy7829 211 IYYGGCVSEV--------PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 211 I~~~~~~~~~--------~~~~~~~LkpgG~l~~~ 237 (511)
|++...++++ ++++++.|||||++++.
T Consensus 265 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 299 (368)
T 3reo_A 265 IFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVA 299 (368)
T ss_dssp EEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred EEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 9999888743 47889999999999885
No 273
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.95 E-value=4e-10 Score=108.40 Aligned_cols=98 Identities=21% Similarity=0.116 Sum_probs=70.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeC----CHHHHHHHHHHHhccCCCcCCCCCeEEEEc-cCCCCCCCC
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEH----IPELIEASLRNISKGNKDLLDSGRVRIVEA-DAREGYLPE 205 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~----~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-d~~~~~~~~ 205 (511)
++++.+|||+|||+|.++..+++. ++|+++|+ ++.+++.+. .+. ...+++.++++ |+.... .
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~--~~~-----~~~~~v~~~~~~D~~~l~--~ 146 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP--MST-----YGWNLVRLQSGVDVFFIP--P 146 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC--CCS-----TTGGGEEEECSCCTTTSC--C
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH--hhh-----cCCCCeEEEeccccccCC--c
Confidence 567899999999999999999987 35999999 554332110 111 12357999999 887542 3
Q ss_pred CCccEEEecCCCC------------chHHHHHhhcccCcEEEEEEccC
Q psy7829 206 APYDVIYYGGCVS------------EVPSRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 206 ~~fD~I~~~~~~~------------~~~~~~~~~LkpgG~l~~~~~~~ 241 (511)
.+||+|+++.++. .++..+.++|||||.|++.+...
T Consensus 147 ~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 147 ERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 6899999987653 12355779999999999866543
No 274
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.95 E-value=2.5e-09 Score=100.57 Aligned_cols=102 Identities=20% Similarity=0.123 Sum_probs=80.8
Q ss_pred cchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEE
Q psy7829 114 MNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRI 193 (511)
Q Consensus 114 ~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 193 (511)
+..+.+...+++.+. +.++ +|||||||+|.++..+++.. .+|+++|+++.+++.+++++.. .++++
T Consensus 30 L~d~~i~~~Iv~~~~--~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~--------~~v~v 95 (271)
T 3fut_A 30 LVSEAHLRRIVEAAR--PFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSG--------LPVRL 95 (271)
T ss_dssp ECCHHHHHHHHHHHC--CCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTT--------SSEEE
T ss_pred cCCHHHHHHHHHhcC--CCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCC--------CCEEE
Confidence 446778888888886 7788 99999999999999999974 4699999999999999998652 37999
Q ss_pred EEccCCCCCCCC-CCccEEEecCCCCchHHHHHhhcc
Q psy7829 194 VEADAREGYLPE-APYDVIYYGGCVSEVPSRVLNQLK 229 (511)
Q Consensus 194 ~~~d~~~~~~~~-~~fD~I~~~~~~~~~~~~~~~~Lk 229 (511)
+++|+.+...+. ..+|.|++|.++.--..-+.++|.
T Consensus 96 i~~D~l~~~~~~~~~~~~iv~NlPy~iss~il~~ll~ 132 (271)
T 3fut_A 96 VFQDALLYPWEEVPQGSLLVANLPYHIATPLVTRLLK 132 (271)
T ss_dssp EESCGGGSCGGGSCTTEEEEEEECSSCCHHHHHHHHH
T ss_pred EECChhhCChhhccCccEEEecCcccccHHHHHHHhc
Confidence 999997643322 368999999988654444444443
No 275
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.95 E-value=1.1e-08 Score=93.22 Aligned_cols=122 Identities=14% Similarity=0.254 Sum_probs=79.7
Q ss_pred CCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---cccccccccccccccc----cccchhhhhc
Q psy7829 372 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---STNHIDLIANETIEII----PHILDLCYLN 444 (511)
Q Consensus 372 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---~~~~v~~i~~d~~~~l----~~~~d~i~~~ 444 (511)
.++.+|||||||+|.+++.+|+.. |+.+|+|+|+++++++.+.++. +..|+.++++|..... +..+|.++.+
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 467899999999999999999887 6789999999999988877765 4567899988876521 1223333222
Q ss_pred ccCCcEEEEE--c-CCccHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHhcCC
Q psy7829 445 LHRGAKVLEI--G-SGSGYLATLMAHLVGPTGHVTGL---EHMMDIAIESIANIST 494 (511)
Q Consensus 445 l~~~~~vLD~--~-~g~g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~~~~ 494 (511)
....+.--.- . .-...+...+.+.|+|+|.++.. ....+...+.+.+.++
T Consensus 116 ~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~ 171 (213)
T 2fca_A 116 FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGL 171 (213)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCC
Confidence 1110000000 0 00134567788899999998765 4444445555555554
No 276
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.94 E-value=3e-09 Score=97.16 Aligned_cols=122 Identities=14% Similarity=0.183 Sum_probs=82.6
Q ss_pred CCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---ccccccccccccccc----cccchhhhhc
Q psy7829 372 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETIEII----PHILDLCYLN 444 (511)
Q Consensus 372 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~~~l----~~~~d~i~~~ 444 (511)
.++.+|||||||+|.+++.+|+.. |+.+|+|+|+++++++.+.++.. ..++.++++|..+.. +..+|.++.+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 468899999999999999999887 66899999999988888777653 567889888876532 2335555444
Q ss_pred ccCCcEEEEE--c-CCccHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHhcCC
Q psy7829 445 LHRGAKVLEI--G-SGSGYLATLMAHLVGPTGHVTGL---EHMMDIAIESIANIST 494 (511)
Q Consensus 445 l~~~~~vLD~--~-~g~g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~~~~ 494 (511)
....+.-..- - --...+...+.+.|+|+|.++.. ....+...+.+.+.|+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~ 174 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGM 174 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCC
Confidence 3211000000 0 00124667788889999998766 4445556666666665
No 277
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.94 E-value=2.4e-09 Score=106.51 Aligned_cols=91 Identities=20% Similarity=0.263 Sum_probs=75.7
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
+.++.+|||||||+|..+..+++.+ +..+++++|+ +.+++.+++ .++++++.+|+.+.. + . ||+
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~~-~-~-~D~ 270 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPP-----------LSGIEHVGGDMFASV-P-Q-GDA 270 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTTCC-C-C-EEE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhh-----------cCCCEEEeCCcccCC-C-C-CCE
Confidence 4567899999999999999999997 7789999999 888876643 236999999998733 2 3 999
Q ss_pred EEecCCCCch--------HHHHHhhcccCcEEEEE
Q psy7829 211 IYYGGCVSEV--------PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 211 I~~~~~~~~~--------~~~~~~~LkpgG~l~~~ 237 (511)
|++...++++ ++++.+.|||||++++.
T Consensus 271 v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 271 MILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9999888643 47889999999999985
No 278
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.94 E-value=3.6e-09 Score=96.78 Aligned_cols=116 Identities=17% Similarity=0.182 Sum_probs=79.6
Q ss_pred CCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---ccccccccccccccccc-----ccchhhhhc
Q psy7829 373 RGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---STNHIDLIANETIEIIP-----HILDLCYLN 444 (511)
Q Consensus 373 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---~~~~v~~i~~d~~~~l~-----~~~d~i~~~ 444 (511)
++.+|||||||+|.+++.+|+.. |+..|+|||++++++..++++. +..|+.++.+|+.+.++ ..+|.++.+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 68899999999999999999887 7789999999998888877664 46789999998766432 334444433
Q ss_pred ccCCcEEEEEcCC-----ccHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHh
Q psy7829 445 LHRGAKVLEIGSG-----SGYLATLMAHLVGPTGHVTGL---EHMMDIAIESIAN 491 (511)
Q Consensus 445 l~~~~~vLD~~~g-----~g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~ 491 (511)
....+.- ...- ...+...+++.|+|||.++.. ....+...+.+..
T Consensus 113 ~~~p~~~--~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 113 FPDPWHK--ARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSS 165 (218)
T ss_dssp SCCCCCS--GGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCCccc--hhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 2111100 0000 013667888899999998776 5555555555544
No 279
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.93 E-value=1.2e-08 Score=90.39 Aligned_cols=131 Identities=13% Similarity=0.203 Sum_probs=88.3
Q ss_pred CCCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---ccccccccccc
Q psy7829 354 PSSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANET 430 (511)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~ 430 (511)
+..+.....++.. +...++.+|||+|||+|.++..+++ +..+|+++|+++++++.+++++. ..+++++.+|.
T Consensus 18 ~~~~~~~~~~~~~--~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~ 92 (183)
T 2yxd_A 18 ITKEEIRAVSIGK--LNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRA 92 (183)
T ss_dssp CCCHHHHHHHHHH--HCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCH
T ss_pred cCHHHHHHHHHHH--cCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCc
Confidence 3456666666666 6778899999999999999999987 34899999999998888777754 35678887776
Q ss_pred ccccc-ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHhcCCCceEEEe
Q psy7829 431 IEIIP-HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL---EHMMDIAIESIANISTNHIDLIA 501 (511)
Q Consensus 431 ~~~l~-~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~~~~~~i~~i~ 501 (511)
.+.++ ..+|.++.+.. .....+...+.+ + |+|.++.. ..-+....+.+++.|. +++.++
T Consensus 93 ~~~~~~~~~D~i~~~~~---------~~~~~~l~~~~~-~-~gG~l~~~~~~~~~~~~~~~~l~~~g~-~~~~~~ 155 (183)
T 2yxd_A 93 EDVLDKLEFNKAFIGGT---------KNIEKIIEILDK-K-KINHIVANTIVLENAAKIINEFESRGY-NVDAVN 155 (183)
T ss_dssp HHHGGGCCCSEEEECSC---------SCHHHHHHHHHH-T-TCCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cccccCCCCcEEEECCc---------ccHHHHHHHHhh-C-CCCEEEEEecccccHHHHHHHHHHcCC-eEEEEE
Confidence 55333 23444433221 122233334444 4 89998776 5555666777777775 555443
No 280
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.93 E-value=3.2e-09 Score=103.62 Aligned_cols=108 Identities=20% Similarity=0.186 Sum_probs=85.5
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCc-CCCCCeEEEEccCCCCC-CCCCCc
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDL-LDSGRVRIVEADAREGY-LPEAPY 208 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-~~~~~v~~~~~d~~~~~-~~~~~f 208 (511)
.++|.+|||+|+|+|.-+.+++... ..+.|+++|+++..++..++++++.+... ....++.+...|+.... ...+.|
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~-~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~f 224 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTY 224 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTT-CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhc-CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccC
Confidence 7899999999999999999999875 66789999999999999999998865321 12357899999986422 123689
Q ss_pred cEEEecCCCCc------------------------------hHHHHHhhcccCcEEEEEEc
Q psy7829 209 DVIYYGGCVSE------------------------------VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 209 D~I~~~~~~~~------------------------------~~~~~~~~LkpgG~l~~~~~ 239 (511)
|.|+++.+|.. ++..+.+.|||||+|+.++-
T Consensus 225 D~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTC 285 (359)
T 4fzv_A 225 DRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTC 285 (359)
T ss_dssp EEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred CEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Confidence 99999988732 12456788999999998643
No 281
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.93 E-value=9.3e-09 Score=97.46 Aligned_cols=91 Identities=15% Similarity=0.166 Sum_probs=69.5
Q ss_pred cCCCCCEEEEEcCCc------cHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEE-EEccCCCCC
Q psy7829 130 HLVDGAKVLDLGSGS------GYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRI-VEADAREGY 202 (511)
Q Consensus 130 ~~~~~~~vLDiG~G~------G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~-~~~d~~~~~ 202 (511)
.++++.+|||+|||+ |. ..+++..++.++|+|+|+++. + . ++++ +++|+.+..
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v-~---------~v~~~i~gD~~~~~ 119 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V-S---------DADSTLIGDCATVH 119 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B-C---------SSSEEEESCGGGCC
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C-C---------CCEEEEECccccCC
Confidence 367899999999944 66 556777755789999999988 1 1 4778 999998643
Q ss_pred CCCCCccEEEecCCCC-----------------chHHHHHhhcccCcEEEEEEccC
Q psy7829 203 LPEAPYDVIYYGGCVS-----------------EVPSRVLNQLKKGGRILAPIGPM 241 (511)
Q Consensus 203 ~~~~~fD~I~~~~~~~-----------------~~~~~~~~~LkpgG~l~~~~~~~ 241 (511)
. .++||+|+++...+ .+.+.+.+.|||||.|++.+...
T Consensus 120 ~-~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 120 T-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp C-SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred c-cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 3 36899999975432 24578899999999999976543
No 282
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.92 E-value=1.3e-09 Score=106.63 Aligned_cols=117 Identities=15% Similarity=0.110 Sum_probs=80.9
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc----------c--c
Q psy7829 353 GPSSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI----------S--T 420 (511)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~----------~--~ 420 (511)
|+..+..+..++.. +.+.++++|||||||+|..++.+|...+ ..+|+|||+++++++.+.++. + .
T Consensus 155 GEt~~~~i~~il~~--l~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~ 231 (438)
T 3uwp_A 155 GETSFDLVAQMIDE--IKMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKH 231 (438)
T ss_dssp GGTHHHHHHHHHHH--HCCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCC
T ss_pred CCCCHHHHHHHHHh--cCCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 35677888888887 7889999999999999999999998774 357999999987777665532 2 2
Q ss_pred ccccccccccccccc----ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 421 NHIDLIANETIEIIP----HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 421 ~~v~~i~~d~~~~l~----~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+++++++|..+..- ..+|.++.+..- ...........+.+.|+|||+|+..
T Consensus 232 ~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~------F~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 232 AEYTLERGDFLSEEWRERIANTSVIFVNNFA------FGPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp CEEEEEECCTTSHHHHHHHHTCSEEEECCTT------CCHHHHHHHHHHHTTSCTTCEEEES
T ss_pred CCeEEEECcccCCccccccCCccEEEEcccc------cCchHHHHHHHHHHcCCCCcEEEEe
Confidence 679999998655311 123333332110 0011122234566788999999987
No 283
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.92 E-value=1.2e-09 Score=105.77 Aligned_cols=106 Identities=22% Similarity=0.274 Sum_probs=79.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCC---CCeEEEEccCCCCCC----CC
Q psy7829 133 DGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDS---GRVRIVEADAREGYL----PE 205 (511)
Q Consensus 133 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~----~~ 205 (511)
++.+||+||||+|..+..+++.. + .+|+++|+++.+++.|++++...+.+.+.. ++++++.+|+..... ..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~-~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK-P-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC-C-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 56799999999999999998874 4 789999999999999999976432100111 279999999875332 24
Q ss_pred CCccEEEecCCC-C-----------chHHHH----HhhcccCcEEEEEEcc
Q psy7829 206 APYDVIYYGGCV-S-----------EVPSRV----LNQLKKGGRILAPIGP 240 (511)
Q Consensus 206 ~~fD~I~~~~~~-~-----------~~~~~~----~~~LkpgG~l~~~~~~ 240 (511)
++||+|+++.+- + .+.+.+ .+.|+|||.+++....
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 689999998743 1 122444 8999999999986543
No 284
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.91 E-value=3.2e-09 Score=95.52 Aligned_cols=110 Identities=17% Similarity=0.251 Sum_probs=75.1
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----cccccccccccccc---cccchhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NHIDLIANETIEII---PHILDLC 441 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~v~~i~~d~~~~l---~~~~d~i 441 (511)
..++++.+|||+|||+|..+..+++.+++.++|+++|+++++++.+++++.. ++++++++|..... +..+|.+
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 18 MFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp HHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEE
T ss_pred hcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEE
Confidence 5678899999999999999999999987778999999999999888877653 57888888854432 2334444
Q ss_pred hhcccC---C-cEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 442 YLNLHR---G-AKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 442 ~~~l~~---~-~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
+.+..- + ..+..-.-..-.+...+.+.|+|+|.++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~ 138 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVV 138 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEE
Confidence 433210 0 000000000113566777889999998755
No 285
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.91 E-value=4.1e-11 Score=112.10 Aligned_cols=113 Identities=17% Similarity=0.184 Sum_probs=86.7
Q ss_pred cchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEE
Q psy7829 114 MNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRI 193 (511)
Q Consensus 114 ~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 193 (511)
+..+.+...+++.+. +.++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.+++++.. .+++++
T Consensus 12 l~~~~~~~~i~~~~~--~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~~-------~~~v~~ 79 (245)
T 1yub_A 12 LTSEKVLNQIIKQLN--LKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLKL-------NTRVTL 79 (245)
T ss_dssp CCCTTTHHHHHHHCC--CCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTTT-------CSEEEE
T ss_pred CCCHHHHHHHHHhcC--CCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhcc-------CCceEE
Confidence 344556777777775 6788899999999999999999884 5799999999999998877642 347999
Q ss_pred EEccCCCCCCC-CCCccEEEecCCCCc-----------------hH----HHHHhhcccCcEEEEEEc
Q psy7829 194 VEADAREGYLP-EAPYDVIYYGGCVSE-----------------VP----SRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 194 ~~~d~~~~~~~-~~~fD~I~~~~~~~~-----------------~~----~~~~~~LkpgG~l~~~~~ 239 (511)
+++|+.+.... .++| .|+++.++.. .. +.+.+.|+|||.+++.+.
T Consensus 80 ~~~D~~~~~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 80 IHQDILQFQFPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp CCSCCTTTTCCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred EECChhhcCcccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 99999864433 3578 7788765531 11 558899999999877543
No 286
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.91 E-value=7.5e-10 Score=100.74 Aligned_cols=112 Identities=12% Similarity=0.067 Sum_probs=77.6
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cc-ccccccccccccccc--cchhhhh
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TN-HIDLIANETIEIIPH--ILDLCYL 443 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~-~v~~i~~d~~~~l~~--~~d~i~~ 443 (511)
-+++|.+|||||||+|++++.+|+.. |..+|+|+|+++..++.+++|+. .. +++++.+|..+.++. .+|.
T Consensus 12 ~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~--- 87 (225)
T 3kr9_A 12 FVSQGAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSV--- 87 (225)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCE---
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCE---
Confidence 45788999999999999999999864 66899999999988888777765 33 477888887665543 2332
Q ss_pred cccCCcEEEEEcCCccHH-----HHHHHHHhCCCcEEEEh-HHHHHHHHHHHHhcCC
Q psy7829 444 NLHRGAKVLEIGSGSGYL-----ATLMAHLVGPTGHVTGL-EHMMDIAIESIANIST 494 (511)
Q Consensus 444 ~l~~~~~vLD~~~g~g~~-----~~~l~~~l~~~g~v~~~-~~ml~~a~~~~~~~~~ 494 (511)
++- +|.|.- .......++++++++.- ..-....++.+.++|+
T Consensus 88 -------Ivi--aG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L~~~Gf 135 (225)
T 3kr9_A 88 -------ITI--AGMGGRLIARILEEGLGKLANVERLILQPNNREDDLRIWLQDHGF 135 (225)
T ss_dssp -------EEE--EEECHHHHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHHHHTTE
T ss_pred -------EEE--cCCChHHHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHHHHCCC
Confidence 221 344432 22234567888887766 2334556667777665
No 287
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.91 E-value=3.3e-09 Score=106.11 Aligned_cols=117 Identities=15% Similarity=0.149 Sum_probs=80.3
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHH-------Hhhc---c--c
Q psy7829 353 GPSSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIES-------IANI---S--T 420 (511)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~-------~~~~---~--~ 420 (511)
|...+..++.++.. +.+.++.+|||||||+|++++.+|+..+ ..+|+|+|+++.+++.+ ++++ + .
T Consensus 224 Get~p~~v~~ml~~--l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~ 300 (433)
T 1u2z_A 224 GELLPNFLSDVYQQ--CQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRL 300 (433)
T ss_dssp CCBCHHHHHHHHHH--TTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred ccccHHHHHHHHHh--cCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCC
Confidence 34567888888887 7888999999999999999999999874 36899999998877665 5544 3 4
Q ss_pred ccccccccccccc------ccccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 421 NHIDLIANETIEI------IPHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 421 ~~v~~i~~d~~~~------l~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+++++.+|.... ....+|.++.+..- .+...-.....+.+.|+|||.++..
T Consensus 301 ~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l------~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 301 NNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL------FDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp CCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT------CCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred CceEEEEcCccccccccccccCCCCEEEEeCcc------ccccHHHHHHHHHHhCCCCeEEEEe
Confidence 6788887654321 12334544432110 0001112235677889999999887
No 288
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.91 E-value=2.5e-09 Score=102.18 Aligned_cols=94 Identities=22% Similarity=0.256 Sum_probs=77.0
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEc
Q psy7829 117 PNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEA 196 (511)
Q Consensus 117 p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 196 (511)
|.+...+++.+. +.++.+|||+|||+|..+..+++.+ +.++|+++|+|+.+++.|++++..+ + ++++++++
T Consensus 12 pvLl~e~l~~L~--~~~g~~vLD~g~G~G~~s~~la~~~-~~~~VigvD~d~~al~~A~~~~~~~-----g-~~v~~v~~ 82 (301)
T 1m6y_A 12 PVMVREVIEFLK--PEDEKIILDCTVGEGGHSRAILEHC-PGCRIIGIDVDSEVLRIAEEKLKEF-----S-DRVSLFKV 82 (301)
T ss_dssp CTTHHHHHHHHC--CCTTCEEEETTCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTGGG-----T-TTEEEEEC
T ss_pred HHHHHHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhc-----C-CcEEEEEC
Confidence 446677788886 7789999999999999999999987 4789999999999999999998874 2 58999999
Q ss_pred cCCCCC---C--CCCCccEEEecCCCCc
Q psy7829 197 DAREGY---L--PEAPYDVIYYGGCVSE 219 (511)
Q Consensus 197 d~~~~~---~--~~~~fD~I~~~~~~~~ 219 (511)
|+.+.. . ...+||.|+++.++..
T Consensus 83 d~~~l~~~l~~~g~~~~D~Vl~D~gvSs 110 (301)
T 1m6y_A 83 SYREADFLLKTLGIEKVDGILMDLGVST 110 (301)
T ss_dssp CGGGHHHHHHHTTCSCEEEEEEECSCCH
T ss_pred CHHHHHHHHHhcCCCCCCEEEEcCccch
Confidence 986521 1 1157999999887643
No 289
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.90 E-value=1.4e-09 Score=101.61 Aligned_cols=114 Identities=10% Similarity=0.094 Sum_probs=82.5
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---ccccccccccccccccc-----ccchhhh
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---STNHIDLIANETIEIIP-----HILDLCY 442 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---~~~~v~~i~~d~~~~l~-----~~~d~i~ 442 (511)
..++.+|||||||+|..++.+|... |+.+|+++|+++++++.++++. +..|+++++++..+... ..||.++
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEE
Confidence 3578999999999999999999887 6789999999988887766654 46678899888655432 3466555
Q ss_pred hcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh-----HHHHHHHHHHHHhcCC
Q psy7829 443 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL-----EHMMDIAIESIANIST 494 (511)
Q Consensus 443 ~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~-----~~ml~~a~~~~~~~~~ 494 (511)
... ......+...+.+.|+|+|.++.+ .+-++.+.+.++..|+
T Consensus 157 s~a---------~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~ 204 (249)
T 3g89_A 157 ARA---------VAPLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGG 204 (249)
T ss_dssp EES---------SCCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTE
T ss_pred ECC---------cCCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCC
Confidence 421 112334556677888999998876 4445556666666665
No 290
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.90 E-value=2.8e-09 Score=100.21 Aligned_cols=123 Identities=19% Similarity=0.204 Sum_probs=88.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----cc
Q psy7829 347 GSAPDNGPSSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NH 422 (511)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~ 422 (511)
...++.+|..+..+..++.. ...+.++.+|||+|||+|..+..+++..+ ++|+++|+++.+++.++++... ++
T Consensus 21 ~~~~~~~~~~~~~~~~~l~~-l~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~ 97 (257)
T 3f4k_A 21 KLLKRQGPGSPEATRKAVSF-INELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADR 97 (257)
T ss_dssp TTSSCSSSCCHHHHHHHHTT-SCCCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTT
T ss_pred cCccccCCCCHHHHHHHHHH-HhcCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCc
Confidence 34556678888888888776 22677899999999999999999999873 5999999999988887776542 23
Q ss_pred cccccccccccc--cccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 423 IDLIANETIEII--PHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 423 v~~i~~d~~~~l--~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
++++.+|..... +..+|.++....-.. .+...+...+.+.|+|+|.++..
T Consensus 98 ~~~~~~d~~~~~~~~~~fD~v~~~~~l~~------~~~~~~l~~~~~~L~pgG~l~~~ 149 (257)
T 3f4k_A 98 VKGITGSMDNLPFQNEELDLIWSEGAIYN------IGFERGMNEWSKYLKKGGFIAVS 149 (257)
T ss_dssp EEEEECCTTSCSSCTTCEEEEEEESCSCC------CCHHHHHHHHHTTEEEEEEEEEE
T ss_pred eEEEECChhhCCCCCCCEEEEEecChHhh------cCHHHHHHHHHHHcCCCcEEEEE
Confidence 788887764321 244565544321111 13455667788889999988765
No 291
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.90 E-value=2.4e-09 Score=98.79 Aligned_cols=112 Identities=18% Similarity=0.187 Sum_probs=77.8
Q ss_pred HHHHHHHHHH-hhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc-cccccccccccccc
Q psy7829 357 ERSIAHILDL-CYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST-NHIDLIANETIEII 434 (511)
Q Consensus 357 ~~~~~~~~~~-~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~-~~v~~i~~d~~~~l 434 (511)
++....++.. ..+.+.++.+|||+|||+|.++..+++.+++.++|+++|+++++++.+.++... .+++++.+|..+..
T Consensus 56 ~~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 135 (227)
T 1g8a_A 56 SKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPE 135 (227)
T ss_dssp CHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGG
T ss_pred hhHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcc
Confidence 4555555432 124577899999999999999999999887778999999999988877766653 57888887764421
Q ss_pred -----cccchhhhhcccCCcEEEEEcCCcc---HHHHHHHHHhCCCcEEEEh
Q psy7829 435 -----PHILDLCYLNLHRGAKVLEIGSGSG---YLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 435 -----~~~~d~i~~~l~~~~~vLD~~~g~g---~~~~~l~~~l~~~g~v~~~ 478 (511)
+..+|.++.+ .. .+. .+...+.+.|+|+|.++..
T Consensus 136 ~~~~~~~~~D~v~~~---------~~-~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 136 EYRALVPKVDVIFED---------VA-QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp GGTTTCCCEEEEEEC---------CC-STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhcccCCceEEEEC---------CC-CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 2234443322 22 111 2256677889999998764
No 292
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.90 E-value=1.2e-08 Score=95.11 Aligned_cols=91 Identities=16% Similarity=0.268 Sum_probs=71.2
Q ss_pred chhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEE
Q psy7829 115 NAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIV 194 (511)
Q Consensus 115 ~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 194 (511)
..+.+...+++.+. +.++.+|||+|||+|.++..+++.. .+|+++|+++.+++.+++++.. .++++++
T Consensus 14 ~d~~~~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~-------~~~v~~~ 81 (244)
T 1qam_A 14 TSKHNIDKIMTNIR--LNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD-------HDNFQVL 81 (244)
T ss_dssp CCHHHHHHHHTTCC--CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT-------CCSEEEE
T ss_pred CCHHHHHHHHHhCC--CCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc-------CCCeEEE
Confidence 45566677776664 5688999999999999999999985 5799999999999999998754 2489999
Q ss_pred EccCCCCCCC-CCCccEEEecCCCC
Q psy7829 195 EADAREGYLP-EAPYDVIYYGGCVS 218 (511)
Q Consensus 195 ~~d~~~~~~~-~~~fD~I~~~~~~~ 218 (511)
++|+.+...+ ...| .|+++.++.
T Consensus 82 ~~D~~~~~~~~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 82 NKDILQFKFPKNQSY-KIFGNIPYN 105 (244)
T ss_dssp CCCGGGCCCCSSCCC-EEEEECCGG
T ss_pred EChHHhCCcccCCCe-EEEEeCCcc
Confidence 9999864433 2345 577776653
No 293
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.90 E-value=3.4e-09 Score=104.69 Aligned_cols=91 Identities=16% Similarity=0.270 Sum_probs=75.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
+.++.+|||||||+|..+..+++.+ |..+++++|+ +.+++.|++ .++++++.+|+.+.. + .||+
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~~-p--~~D~ 249 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSG-----------SNNLTYVGGDMFTSI-P--NADA 249 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-----------BTTEEEEECCTTTCC-C--CCSE
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhccc-----------CCCcEEEeccccCCC-C--CccE
Confidence 4567899999999999999999987 7789999999 999877653 135999999997633 2 3999
Q ss_pred EEecCCCCch--------HHHHHhhccc---CcEEEEE
Q psy7829 211 IYYGGCVSEV--------PSRVLNQLKK---GGRILAP 237 (511)
Q Consensus 211 I~~~~~~~~~--------~~~~~~~Lkp---gG~l~~~ 237 (511)
|++...++++ ++++.+.||| ||++++.
T Consensus 250 v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~ 287 (352)
T 1fp2_A 250 VLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTII 287 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEE
T ss_pred EEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 9999888643 4778999999 9999885
No 294
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.90 E-value=4.5e-09 Score=95.99 Aligned_cols=111 Identities=23% Similarity=0.358 Sum_probs=81.2
Q ss_pred CCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cccccccccccc
Q psy7829 355 SSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETI 431 (511)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~ 431 (511)
..+..+..++.. +.+.++.+|||+|||+|+++..+++..+++.+|+++|+++++++.+++++. ..+++++.+|..
T Consensus 61 ~~~~~~~~~~~~--~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~ 138 (215)
T 2yxe_A 61 SAIHMVGMMCEL--LDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGT 138 (215)
T ss_dssp CCHHHHHHHHHH--TTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGG
T ss_pred CcHHHHHHHHHh--hCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcc
Confidence 356777788877 678899999999999999999999998777899999999998888777653 456777777754
Q ss_pred cccc--ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 432 EIIP--HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 432 ~~l~--~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
...+ ..+|.++.. .+...+...+.+.|+|+|.++..
T Consensus 139 ~~~~~~~~fD~v~~~-----------~~~~~~~~~~~~~L~pgG~lv~~ 176 (215)
T 2yxe_A 139 LGYEPLAPYDRIYTT-----------AAGPKIPEPLIRQLKDGGKLLMP 176 (215)
T ss_dssp GCCGGGCCEEEEEES-----------SBBSSCCHHHHHTEEEEEEEEEE
T ss_pred cCCCCCCCeeEEEEC-----------CchHHHHHHHHHHcCCCcEEEEE
Confidence 3322 223333322 11222335777888999998776
No 295
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.89 E-value=1.4e-09 Score=100.74 Aligned_cols=110 Identities=20% Similarity=0.339 Sum_probs=78.4
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-ccccccccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NHIDLIANETI 431 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~v~~i~~d~~ 431 (511)
.+.....+..+ +...++.+|||||||+|+.++.+|+.. +.++|+++|+++++++.+++++. . ++++++.+|..
T Consensus 56 ~~~~~~~l~~~--~~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 132 (232)
T 3ntv_A 56 DRLTLDLIKQL--IRMNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNAL 132 (232)
T ss_dssp CHHHHHHHHHH--HHHHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGG
T ss_pred CHHHHHHHHHH--HhhcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHH
Confidence 34444444444 455688999999999999999999854 67999999999998888877764 3 36889999877
Q ss_pred cccc----ccchhhhhcccCCcEEEEEcC-CccHHHHHHHHHhCCCcEEEE
Q psy7829 432 EIIP----HILDLCYLNLHRGAKVLEIGS-GSGYLATLMAHLVGPTGHVTG 477 (511)
Q Consensus 432 ~~l~----~~~d~i~~~l~~~~~vLD~~~-g~g~~~~~l~~~l~~~g~v~~ 477 (511)
+.++ ..+|.++.+ ..+ ..-.+...+.+.|+|+|.++.
T Consensus 133 ~~~~~~~~~~fD~V~~~---------~~~~~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 133 EQFENVNDKVYDMIFID---------AAKAQSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp GCHHHHTTSCEEEEEEE---------TTSSSHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHhhccCCccEEEEc---------CcHHHHHHHHHHHHHhcCCCeEEEE
Confidence 6554 345555432 222 122344566788899999987
No 296
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.89 E-value=1.3e-09 Score=101.03 Aligned_cols=123 Identities=16% Similarity=0.146 Sum_probs=80.2
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---------ccccccccccccccccc-----
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---------STNHIDLIANETIEIIP----- 435 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---------~~~~v~~i~~d~~~~l~----- 435 (511)
...++.+|||||||+|.+++.+|+.. |+..|+|||+++.+++.+++++ +..|+.++.+|..+.++
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~ 121 (235)
T 3ckk_A 43 RAQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYK 121 (235)
T ss_dssp ---CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCT
T ss_pred ccCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCC
Confidence 34567899999999999999999876 6789999999999888766542 35689999988765333
Q ss_pred ccchhhhhcccCCcEEEEE---cCCccHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHhcC
Q psy7829 436 HILDLCYLNLHRGAKVLEI---GSGSGYLATLMAHLVGPTGHVTGL---EHMMDIAIESIANIS 493 (511)
Q Consensus 436 ~~~d~i~~~l~~~~~vLD~---~~g~g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~~~ 493 (511)
..+|.++......+.-..- -.-...+...+++.|+|||.++.. ....+...+.+...+
T Consensus 122 ~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 122 GQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHP 185 (235)
T ss_dssp TCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTST
T ss_pred cCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 2344443322211100000 000124567788999999998776 556666666666655
No 297
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.89 E-value=2.6e-09 Score=97.61 Aligned_cols=91 Identities=18% Similarity=0.146 Sum_probs=70.3
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCC
Q psy7829 122 DAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREG 201 (511)
Q Consensus 122 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 201 (511)
.+++.+. ...++.+|||+|||+|.++..++ .+++++|+++. +++++++|+.+.
T Consensus 57 ~~~~~l~-~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~--------------------~~~~~~~d~~~~ 109 (215)
T 2zfu_A 57 RIARDLR-QRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL--------------------DPRVTVCDMAQV 109 (215)
T ss_dssp HHHHHHH-TSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS--------------------STTEEESCTTSC
T ss_pred HHHHHHh-ccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC--------------------CceEEEeccccC
Confidence 3455554 24577899999999999987763 46999999987 156788898775
Q ss_pred CCCCCCccEEEecCCCCc-----hHHHHHhhcccCcEEEEEEc
Q psy7829 202 YLPEAPYDVIYYGGCVSE-----VPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 202 ~~~~~~fD~I~~~~~~~~-----~~~~~~~~LkpgG~l~~~~~ 239 (511)
..+.++||+|++..++++ +++++.+.|+|||.+++...
T Consensus 110 ~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 110 PLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp SCCTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEc
Confidence 445578999999988753 34788999999999998643
No 298
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.88 E-value=3.5e-09 Score=98.87 Aligned_cols=100 Identities=16% Similarity=0.214 Sum_probs=73.4
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-ccccccccccccccc---------
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NHIDLIANETIEIIP--------- 435 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~v~~i~~d~~~~l~--------- 435 (511)
+...++.+|||||||+|+.++.+|+.++++++|+++|+++++++.+++++. . ++++++.+|+.+.++
T Consensus 75 ~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 75 LKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp HHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred HHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCC
Confidence 344578899999999999999999988547999999999988888777654 3 468888888766543
Q ss_pred ccchhhhhcccCCcEEEEEcC-CccHHHHHHHHHhCCCcEEEE
Q psy7829 436 HILDLCYLNLHRGAKVLEIGS-GSGYLATLMAHLVGPTGHVTG 477 (511)
Q Consensus 436 ~~~d~i~~~l~~~~~vLD~~~-g~g~~~~~l~~~l~~~g~v~~ 477 (511)
..||.++.+ ..+ ..-.+...+.+.|+|||.++.
T Consensus 155 ~~fD~V~~d---------~~~~~~~~~l~~~~~~LkpGG~lv~ 188 (247)
T 1sui_A 155 GSYDFIFVD---------ADKDNYLNYHKRLIDLVKVGGVIGY 188 (247)
T ss_dssp TCBSEEEEC---------SCSTTHHHHHHHHHHHBCTTCCEEE
T ss_pred CCEEEEEEc---------CchHHHHHHHHHHHHhCCCCeEEEE
Confidence 335554432 222 223445567788999999875
No 299
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.88 E-value=2.2e-10 Score=113.74 Aligned_cols=104 Identities=18% Similarity=0.207 Sum_probs=72.8
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccc--ccccccccccccc--ccchhhhhccc
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNH--IDLIANETIEIIP--HILDLCYLNLH 446 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~--v~~i~~d~~~~l~--~~~d~i~~~l~ 446 (511)
..++.+|||+|||+|.+++.+++.. .+|+++|+++.+++.+++|+..++ ++++.+|..+... ..+|.++.+..
T Consensus 231 ~~~~~~VLDlGcG~G~~~~~la~~g---~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp 307 (381)
T 3dmg_A 231 GVRGRQVLDLGAGYGALTLPLARMG---AEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPP 307 (381)
T ss_dssp TTTTCEEEEETCTTSTTHHHHHHTT---CEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCC
T ss_pred CCCCCEEEEEeeeCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCc
Confidence 3478899999999999999999873 799999999999998888876433 6777887666543 36777666533
Q ss_pred CCcEEEEEcC-CccHHHHHHHHHhCCCcEEEEh
Q psy7829 447 RGAKVLEIGS-GSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 447 ~~~~vLD~~~-g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
-.... .... ..-.+...+.+.|+|+|.++.+
T Consensus 308 ~~~~~-~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 308 FHVGG-AVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp CCTTC-SSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhcc-cccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 22100 0000 0113445667889999998876
No 300
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.88 E-value=4.4e-09 Score=95.64 Aligned_cols=108 Identities=22% Similarity=0.334 Sum_probs=80.8
Q ss_pred CCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cccccccccccc
Q psy7829 355 SSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETI 431 (511)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~ 431 (511)
..+..++.++.. +.+.++.+|||+|||+|+++..+++.. .+|+++|+++++++.+++++. ..+++++.+|..
T Consensus 61 ~~~~~~~~~~~~--l~~~~~~~vLdiG~G~G~~~~~la~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~ 135 (210)
T 3lbf_A 61 SQPYMVARMTEL--LELTPQSRVLEIGTGSGYQTAILAHLV---QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGW 135 (210)
T ss_dssp CCHHHHHHHHHH--TTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG
T ss_pred CCHHHHHHHHHh--cCCCCCCEEEEEcCCCCHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcc
Confidence 466778888887 788899999999999999999999884 899999999998888777654 557888888866
Q ss_pred cccc--ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 432 EIIP--HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 432 ~~l~--~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
+... ..+|.++... +...+...+.+.|+|+|.++..
T Consensus 136 ~~~~~~~~~D~i~~~~-----------~~~~~~~~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 136 QGWQARAPFDAIIVTA-----------APPEIPTALMTQLDEGGILVLP 173 (210)
T ss_dssp GCCGGGCCEEEEEESS-----------BCSSCCTHHHHTEEEEEEEEEE
T ss_pred cCCccCCCccEEEEcc-----------chhhhhHHHHHhcccCcEEEEE
Confidence 5432 2344444321 1222234678889999988775
No 301
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.88 E-value=4.8e-09 Score=97.16 Aligned_cols=100 Identities=20% Similarity=0.284 Sum_probs=71.1
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc-cccccccccccccc-----cccchhhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST-NHIDLIANETIEII-----PHILDLCY 442 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~-~~v~~i~~d~~~~l-----~~~~d~i~ 442 (511)
+.+.++.+|||+|||+|.++..+++.+++.++|+++|+++.+++.+.++... .+++++.+|..+.. +..+|.++
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~ 152 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIF 152 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEE
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEE
Confidence 5677899999999999999999999987778999999998766554444332 67888888765421 22345444
Q ss_pred hcccCCcEEEEEcCCccH---HHHHHHHHhCCCcEEEEh
Q psy7829 443 LNLHRGAKVLEIGSGSGY---LATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 443 ~~l~~~~~vLD~~~g~g~---~~~~l~~~l~~~g~v~~~ 478 (511)
.+.. .+.. +...+.+.|+|+|.++..
T Consensus 153 ~~~~----------~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 153 ADVA----------QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp ECCC----------CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EcCC----------CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 4221 3322 245578889999988765
No 302
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.88 E-value=5.4e-09 Score=101.52 Aligned_cols=110 Identities=22% Similarity=0.358 Sum_probs=78.5
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---cccccccccccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---STNHIDLIANETIE 432 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---~~~~v~~i~~d~~~ 432 (511)
.+.....++.. +.++++.+|||||||+|.++..+++..+.+++|+++|+++++++.+++++ +..+++++.+|..+
T Consensus 60 ~~~~~~~l~~~--l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~ 137 (317)
T 1dl5_A 60 QPSLMALFMEW--VGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY 137 (317)
T ss_dssp CHHHHHHHHHH--TTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG
T ss_pred CHHHHHHHHHh--cCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhh
Confidence 56777787777 78889999999999999999999998743578999999999988887765 35568888887655
Q ss_pred ccc--ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 433 IIP--HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 433 ~l~--~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
..+ ..+|.++....- ..+...+.+.|+|+|.++..
T Consensus 138 ~~~~~~~fD~Iv~~~~~-----------~~~~~~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 138 GVPEFSPYDVIFVTVGV-----------DEVPETWFTQLKEGGRVIVP 174 (317)
T ss_dssp CCGGGCCEEEEEECSBB-----------SCCCHHHHHHEEEEEEEEEE
T ss_pred ccccCCCeEEEEEcCCH-----------HHHHHHHHHhcCCCcEEEEE
Confidence 332 234443332111 11124566777787776654
No 303
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.88 E-value=1e-08 Score=95.73 Aligned_cols=123 Identities=13% Similarity=0.235 Sum_probs=80.3
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc-----------ccccccccccccccccccc-
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI-----------STNHIDLIANETIEIIPHI- 437 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~-----------~~~~v~~i~~d~~~~l~~~- 437 (511)
.++++.+|||||||+|.+++.+|+.. |..+|+|+|+++.+++.+.+++ +..|+.++.+|..+.++..
T Consensus 46 ~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~ 124 (246)
T 2vdv_E 46 QMTKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFF 124 (246)
T ss_dssp CBSCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTS
T ss_pred cCCCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhc
Confidence 34578899999999999999999887 6679999999998887766554 4467889888876644422
Q ss_pred ----chhhhhcccCCcEEE--EEcC-CccHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHhcC
Q psy7829 438 ----LDLCYLNLHRGAKVL--EIGS-GSGYLATLMAHLVGPTGHVTGL---EHMMDIAIESIANIS 493 (511)
Q Consensus 438 ----~d~i~~~l~~~~~vL--D~~~-g~g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~~~ 493 (511)
++.++....+.+.-- ..-. -...+...+.+.|+|||.++.. ....+...+.+...+
T Consensus 125 ~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 190 (246)
T 2vdv_E 125 EKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHP 190 (246)
T ss_dssp CTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHST
T ss_pred cccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCc
Confidence 222222111110000 0000 0025667788899999998776 555555555565554
No 304
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.88 E-value=6.3e-09 Score=100.80 Aligned_cols=100 Identities=19% Similarity=0.244 Sum_probs=75.9
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---ccccccccccccccccc--ccchhhhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---STNHIDLIANETIEIIP--HILDLCYL 443 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---~~~~v~~i~~d~~~~l~--~~~d~i~~ 443 (511)
+.+.++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.+++|+ +..+++++++|...... ..+|
T Consensus 114 l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD---- 189 (315)
T 1ixk_A 114 LDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFD---- 189 (315)
T ss_dssp HCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEE----
T ss_pred hCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCC----
Confidence 67889999999999999999999998865689999999988888776665 45678888888655322 1233
Q ss_pred cccCCcEEEEEcC-Ccc-------------------------HHHHHHHHHhCCCcEEEE
Q psy7829 444 NLHRGAKVLEIGS-GSG-------------------------YLATLMAHLVGPTGHVTG 477 (511)
Q Consensus 444 ~l~~~~~vLD~~~-g~g-------------------------~~~~~l~~~l~~~g~v~~ 477 (511)
..++|..| |.| .+...+++.|+|||.++.
T Consensus 190 -----~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~ 244 (315)
T 1ixk_A 190 -----KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVY 244 (315)
T ss_dssp -----EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -----EEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 34556666 555 344567788999999876
No 305
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.88 E-value=2.6e-09 Score=95.54 Aligned_cols=119 Identities=14% Similarity=0.101 Sum_probs=76.7
Q ss_pred CCCHHHHHHHHHHhhc-CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cccccccccc
Q psy7829 354 PSSERSIAHILDLCYL-NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANE 429 (511)
Q Consensus 354 ~~~~~~~~~~~~~~~~-~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d 429 (511)
|.+......++..... ...++.+|||+|||+|.+++.+++.. ..+|+++|+++++++.+++|+. ..+++++++|
T Consensus 24 p~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d 101 (189)
T 3p9n_A 24 PTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRG--AASVLFVESDQRSAAVIARNIEALGLSGATLRRGA 101 (189)
T ss_dssp --CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESC
T ss_pred cCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCC--CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEcc
Confidence 5566666666655211 12578999999999999999887643 3689999999998888777754 4578899888
Q ss_pred ccccc----cccchhhhhcccCCcEEEEEcCCccHHHHHHHH--HhCCCcEEEEh
Q psy7829 430 TIEII----PHILDLCYLNLHRGAKVLEIGSGSGYLATLMAH--LVGPTGHVTGL 478 (511)
Q Consensus 430 ~~~~l----~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~--~l~~~g~v~~~ 478 (511)
..+.. +..+|.++.+....... ...-.....+.+ .|+|+|.++..
T Consensus 102 ~~~~~~~~~~~~fD~i~~~~p~~~~~----~~~~~~l~~~~~~~~L~pgG~l~~~ 152 (189)
T 3p9n_A 102 VAAVVAAGTTSPVDLVLADPPYNVDS----ADVDAILAALGTNGWTREGTVAVVE 152 (189)
T ss_dssp HHHHHHHCCSSCCSEEEECCCTTSCH----HHHHHHHHHHHHSSSCCTTCEEEEE
T ss_pred HHHHHhhccCCCccEEEECCCCCcch----hhHHHHHHHHHhcCccCCCeEEEEE
Confidence 76653 23455554432211100 001123345556 78999998765
No 306
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.87 E-value=5.4e-09 Score=96.35 Aligned_cols=113 Identities=24% Similarity=0.356 Sum_probs=81.2
Q ss_pred CCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhC----CCcEEEEEcCCHHHHHHHHhhcc--------ccc
Q psy7829 355 SSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVG----PTGHVTGLEHMMDIAIESIANIS--------TNH 422 (511)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~----~~~~v~~id~~~~~~~~~~~~~~--------~~~ 422 (511)
..+...+.++..+...+.++.+|||||||+|+++..+++..+ |.++|+++|+++++++.+++++. ..+
T Consensus 62 ~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 141 (227)
T 2pbf_A 62 SAPHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDN 141 (227)
T ss_dssp CCHHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTT
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCC
Confidence 356677777776222578899999999999999999999886 66799999999998888877654 356
Q ss_pred cccccccccccc------cccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 423 IDLIANETIEII------PHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 423 v~~i~~d~~~~l------~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
++++.+|..+.. ...+|.++.. .....+...+.+.|+|+|.++..
T Consensus 142 v~~~~~d~~~~~~~~~~~~~~fD~I~~~-----------~~~~~~~~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 142 FKIIHKNIYQVNEEEKKELGLFDAIHVG-----------ASASELPEILVDLLAENGKLIIP 192 (227)
T ss_dssp EEEEECCGGGCCHHHHHHHCCEEEEEEC-----------SBBSSCCHHHHHHEEEEEEEEEE
T ss_pred EEEEECChHhcccccCccCCCcCEEEEC-----------CchHHHHHHHHHhcCCCcEEEEE
Confidence 888887765533 1224433222 12223347778889999988766
No 307
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.87 E-value=1.2e-08 Score=90.92 Aligned_cols=128 Identities=13% Similarity=0.194 Sum_probs=87.6
Q ss_pred CCCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-ccccccccc
Q psy7829 354 PSSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NHIDLIANE 429 (511)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~v~~i~~d 429 (511)
+........++.. +.+.++.+|||+|||+|..+..+++.. .+|+++|+++++++.+++++. . .+++++.+|
T Consensus 16 ~~~~~~~~~~~~~--~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d 90 (192)
T 1l3i_A 16 PTAMEVRCLIMCL--AEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGD 90 (192)
T ss_dssp CCCHHHHHHHHHH--HCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESC
T ss_pred CChHHHHHHHHHh--cCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecC
Confidence 4556666666665 678899999999999999999998765 799999999988888777654 3 467777776
Q ss_pred cccccc--ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHhcCC
Q psy7829 430 TIEIIP--HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL---EHMMDIAIESIANIST 494 (511)
Q Consensus 430 ~~~~l~--~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~~~~ 494 (511)
..+.++ ..+|.++..... -....+...+.+.++|+|.++.. ..-.....+.+.+.|+
T Consensus 91 ~~~~~~~~~~~D~v~~~~~~--------~~~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 91 APEALCKIPDIDIAVVGGSG--------GELQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF 152 (192)
T ss_dssp HHHHHTTSCCEEEEEESCCT--------TCHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred HHHhcccCCCCCEEEECCch--------HHHHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC
Confidence 544332 123333221110 01234556677788999998775 5555566666777776
No 308
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.86 E-value=6.8e-09 Score=98.23 Aligned_cols=106 Identities=13% Similarity=0.082 Sum_probs=79.8
Q ss_pred cchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeE
Q psy7829 114 MNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGP-TGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVR 192 (511)
Q Consensus 114 ~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~ 192 (511)
+..+.+...+++.+. +.++.+|||||||+|.++..+++.... .++|+++|+++.+++.++++. . ++++
T Consensus 25 L~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~--------~~v~ 93 (279)
T 3uzu_A 25 LVDHGVIDAIVAAIR--PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-G--------ELLE 93 (279)
T ss_dssp ECCHHHHHHHHHHHC--CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-G--------GGEE
T ss_pred cCCHHHHHHHHHhcC--CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-C--------CCcE
Confidence 446678888888886 778999999999999999999998743 356999999999999999984 2 2799
Q ss_pred EEEccCCCCCCCC----C--CccEEEecCCCCchHHHHHhhccc
Q psy7829 193 IVEADAREGYLPE----A--PYDVIYYGGCVSEVPSRVLNQLKK 230 (511)
Q Consensus 193 ~~~~d~~~~~~~~----~--~fD~I~~~~~~~~~~~~~~~~Lkp 230 (511)
++++|+.+...+. . ..+.|++|.++.--..-+.++|..
T Consensus 94 ~i~~D~~~~~~~~~~~~~~~~~~~vv~NlPY~iss~il~~ll~~ 137 (279)
T 3uzu_A 94 LHAGDALTFDFGSIARPGDEPSLRIIGNLPYNISSPLLFHLMSF 137 (279)
T ss_dssp EEESCGGGCCGGGGSCSSSSCCEEEEEECCHHHHHHHHHHHGGG
T ss_pred EEECChhcCChhHhcccccCCceEEEEccCccccHHHHHHHHhc
Confidence 9999987643221 1 235688887764433445666653
No 309
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.86 E-value=1.1e-08 Score=95.61 Aligned_cols=109 Identities=18% Similarity=0.243 Sum_probs=81.0
Q ss_pred CCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-cccccccccc
Q psy7829 355 SSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NHIDLIANET 430 (511)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~v~~i~~d~ 430 (511)
..+..+..++.. +.+.++.+|||+|||+|.++..+++. + .+|+++|+++++++.++++.. . .+++++.+|.
T Consensus 75 ~~~~~~~~~~~~--~~~~~~~~vldiG~G~G~~~~~l~~~-~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 149 (248)
T 2yvl_A 75 IYPKDSFYIALK--LNLNKEKRVLEFGTGSGALLAVLSEV-A--GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDF 149 (248)
T ss_dssp CCHHHHHHHHHH--TTCCTTCEEEEECCTTSHHHHHHHHH-S--SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCT
T ss_pred ccchhHHHHHHh--cCCCCCCEEEEeCCCccHHHHHHHHh-C--CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcCh
Confidence 346777777776 78889999999999999999999988 3 899999999999888877753 2 5677777776
Q ss_pred cccc-c-ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 431 IEII-P-HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 431 ~~~l-~-~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+.. + ..+|.++.+.. .+......+.+.++|+|.++..
T Consensus 150 ~~~~~~~~~~D~v~~~~~----------~~~~~l~~~~~~L~~gG~l~~~ 189 (248)
T 2yvl_A 150 KDAEVPEGIFHAAFVDVR----------EPWHYLEKVHKSLMEGAPVGFL 189 (248)
T ss_dssp TTSCCCTTCBSEEEECSS----------CGGGGHHHHHHHBCTTCEEEEE
T ss_pred hhcccCCCcccEEEECCc----------CHHHHHHHHHHHcCCCCEEEEE
Confidence 5543 2 23444443221 2334567778899999999887
No 310
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.86 E-value=3.1e-09 Score=97.67 Aligned_cols=107 Identities=20% Similarity=0.317 Sum_probs=75.1
Q ss_pred HHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cc-ccccccccccccccc
Q psy7829 361 AHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TN-HIDLIANETIEIIPH 436 (511)
Q Consensus 361 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~-~v~~i~~d~~~~l~~ 436 (511)
+.++.. .+...++.+|||||||+|+.++.+++.++++++|+++|+++++++.+++++. .. +++++.+|..+.++.
T Consensus 47 ~~~l~~-l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 125 (223)
T 3duw_A 47 GKFLQL-LVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQ 125 (223)
T ss_dssp HHHHHH-HHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHH
T ss_pred HHHHHH-HHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHH
Confidence 344443 1345678999999999999999999987447899999999988888777654 33 488888887665432
Q ss_pred -------cchhhhhcccCCcEEEEEcCC-ccHHHHHHHHHhCCCcEEEE
Q psy7829 437 -------ILDLCYLNLHRGAKVLEIGSG-SGYLATLMAHLVGPTGHVTG 477 (511)
Q Consensus 437 -------~~d~i~~~l~~~~~vLD~~~g-~g~~~~~l~~~l~~~g~v~~ 477 (511)
.+|.++. |..+. ...+...+.+.|+|+|.++.
T Consensus 126 ~~~~~~~~fD~v~~---------d~~~~~~~~~l~~~~~~L~pgG~lv~ 165 (223)
T 3duw_A 126 IENEKYEPFDFIFI---------DADKQNNPAYFEWALKLSRPGTVIIG 165 (223)
T ss_dssp HHHTTCCCCSEEEE---------CSCGGGHHHHHHHHHHTCCTTCEEEE
T ss_pred HHhcCCCCcCEEEE---------cCCcHHHHHHHHHHHHhcCCCcEEEE
Confidence 2444432 22221 12345566788999998875
No 311
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.85 E-value=3.3e-09 Score=100.41 Aligned_cols=121 Identities=20% Similarity=0.195 Sum_probs=85.3
Q ss_pred CCCCCCCCCHHHHHHHHHHhhcC-CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-cc
Q psy7829 348 SAPDNGPSSERSIAHILDLCYLN-LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NH 422 (511)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~ 422 (511)
..++.+|..+..+.+++.. +. +.++.+|||||||+|..+..+++. +..+|+++|+++.+++.++++.. . ++
T Consensus 22 ~~~~~~~~~~~~~~~~l~~--l~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~ 97 (267)
T 3kkz_A 22 NMERQGPGSPEVTLKALSF--IDNLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNR 97 (267)
T ss_dssp TSSCSSSCCHHHHHHHHTT--CCCCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTT
T ss_pred hccccCCCCHHHHHHHHHh--cccCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcC
Confidence 3445567788888888876 44 788999999999999999999977 34799999999999888877654 2 45
Q ss_pred cccccccccccc--cccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 423 IDLIANETIEII--PHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 423 v~~i~~d~~~~l--~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
++++.+|..+.. +..+|.++....-.. .+...+...+.+.|+|+|.++..
T Consensus 98 v~~~~~d~~~~~~~~~~fD~i~~~~~~~~------~~~~~~l~~~~~~LkpgG~l~~~ 149 (267)
T 3kkz_A 98 VTGIVGSMDDLPFRNEELDLIWSEGAIYN------IGFERGLNEWRKYLKKGGYLAVS 149 (267)
T ss_dssp EEEEECCTTSCCCCTTCEEEEEESSCGGG------TCHHHHHHHHGGGEEEEEEEEEE
T ss_pred cEEEEcChhhCCCCCCCEEEEEEcCCcee------cCHHHHHHHHHHHcCCCCEEEEE
Confidence 888888764431 234555443211100 13445567777888999988754
No 312
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.85 E-value=3.4e-09 Score=98.69 Aligned_cols=115 Identities=14% Similarity=0.169 Sum_probs=80.1
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---cccccccccccccccc-----cccchhh
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---STNHIDLIANETIEII-----PHILDLC 441 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---~~~~v~~i~~d~~~~l-----~~~~d~i 441 (511)
.+.++.+|||+|||+|..++.+|... +..+|+++|+++++++.++++. +..+++++++|..+.. +..+|.+
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEE
Confidence 33578999999999999999999765 6689999999998777766554 4557888888765432 2345555
Q ss_pred hhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh-----HHHHHHHHHHHHhcCC
Q psy7829 442 YLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL-----EHMMDIAIESIANIST 494 (511)
Q Consensus 442 ~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~-----~~ml~~a~~~~~~~~~ 494 (511)
+... ......+...+.+.|+|+|.++.. ..-++...+.+...|+
T Consensus 146 ~~~~---------~~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~ 194 (240)
T 1xdz_A 146 TARA---------VARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGG 194 (240)
T ss_dssp EEEC---------CSCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTE
T ss_pred EEec---------cCCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCC
Confidence 4422 123344556667889999998866 3334455566666665
No 313
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.85 E-value=1.8e-09 Score=98.41 Aligned_cols=112 Identities=16% Similarity=0.162 Sum_probs=77.4
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----cccccccccccccccc--cchhhhh
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NHIDLIANETIEIIPH--ILDLCYL 443 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~v~~i~~d~~~~l~~--~~d~i~~ 443 (511)
-++++.+|||||||+|++++.+++.. +..+|+|+|+++..++.+++|+.. ++++++.+|..+.+.. .+|.
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~--- 93 (230)
T 3lec_A 18 YVPKGARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDT--- 93 (230)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCE---
T ss_pred hCCCCCEEEEECCchHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCE---
Confidence 55789999999999999999999874 668999999999888888877653 3478888887765543 2332
Q ss_pred cccCCcEEEEEcCCccH--HHH---HHHHHhCCCcEEEEh-HHHHHHHHHHHHhcCC
Q psy7829 444 NLHRGAKVLEIGSGSGY--LAT---LMAHLVGPTGHVTGL-EHMMDIAIESIANIST 494 (511)
Q Consensus 444 ~l~~~~~vLD~~~g~g~--~~~---~l~~~l~~~g~v~~~-~~ml~~a~~~~~~~~~ 494 (511)
++ -||.|. +.. .....++++|+++.- ..-.+..++.+.++|+
T Consensus 94 -------Iv--iaGmGg~lI~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L~~~Gf 141 (230)
T 3lec_A 94 -------IT--ICGMGGRLIADILNNDIDKLQHVKTLVLQPNNREDDLRKWLAANDF 141 (230)
T ss_dssp -------EE--EEEECHHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHHTTE
T ss_pred -------EE--EeCCchHHHHHHHHHHHHHhCcCCEEEEECCCChHHHHHHHHHCCC
Confidence 22 245554 222 223456788887766 2224555666777665
No 314
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.85 E-value=3.4e-09 Score=99.16 Aligned_cols=108 Identities=19% Similarity=0.308 Sum_probs=76.2
Q ss_pred HHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-cccccccccccccccc
Q psy7829 361 AHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NHIDLIANETIEIIPH 436 (511)
Q Consensus 361 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~v~~i~~d~~~~l~~ 436 (511)
..++.. .....++.+|||||||+|+.++.+|+.+++.++|+++|+++++++.+++++. . ++++++.+|..+.++.
T Consensus 52 ~~~l~~-l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~ 130 (248)
T 3tfw_A 52 GQFLAL-LVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLES 130 (248)
T ss_dssp HHHHHH-HHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHT
T ss_pred HHHHHH-HHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHh
Confidence 344443 1345678999999999999999999987547999999999999888877764 3 3688888887664432
Q ss_pred -----cchhhhhcccCCcEEEEEcC-CccHHHHHHHHHhCCCcEEEEh
Q psy7829 437 -----ILDLCYLNLHRGAKVLEIGS-GSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 437 -----~~d~i~~~l~~~~~vLD~~~-g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+|.++. |..+ ....+...+.+.|+|||.++.-
T Consensus 131 ~~~~~~fD~V~~---------d~~~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 131 LGECPAFDLIFI---------DADKPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp CCSCCCCSEEEE---------CSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred cCCCCCeEEEEE---------CCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence 3444433 2222 1223455667889999988753
No 315
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.84 E-value=8.9e-09 Score=93.15 Aligned_cols=110 Identities=14% Similarity=0.053 Sum_probs=73.4
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---------------c
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---------------T 420 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---------------~ 420 (511)
.+... ..+.. +.+.++.+|||+|||+|..+..+|+.. .+|+|+|+++++++.++++.+ .
T Consensus 8 ~~~l~-~~~~~--l~~~~~~~vLD~GCG~G~~~~~la~~g---~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~ 81 (203)
T 1pjz_A 8 NKDLQ-QYWSS--LNVVPGARVLVPLCGKSQDMSWLSGQG---YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAA 81 (203)
T ss_dssp THHHH-HHHHH--HCCCTTCEEEETTTCCSHHHHHHHHHC---CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEEC
T ss_pred CHHHH-HHHHh--cccCCCCEEEEeCCCCcHhHHHHHHCC---CeEEEEeCCHHHHHHHHHHccCCcccccccccccccC
Confidence 33444 44444 567789999999999999999999873 799999999999999887754 3
Q ss_pred ccccccccccccccc---ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcE
Q psy7829 421 NHIDLIANETIEIIP---HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGH 474 (511)
Q Consensus 421 ~~v~~i~~d~~~~l~---~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~ 474 (511)
.+++++++|..+... ..||.++....-. .+. ......+...+++.|+|||.
T Consensus 82 ~~v~~~~~d~~~l~~~~~~~fD~v~~~~~l~--~l~-~~~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 82 PGIEIWCGDFFALTARDIGHCAAFYDRAAMI--ALP-ADMRERYVQHLEALMPQACS 135 (203)
T ss_dssp SSSEEEEECCSSSTHHHHHSEEEEEEESCGG--GSC-HHHHHHHHHHHHHHSCSEEE
T ss_pred CccEEEECccccCCcccCCCEEEEEECcchh--hCC-HHHHHHHHHHHHHHcCCCcE
Confidence 578888888655432 3455443211000 000 00011235678889999998
No 316
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.84 E-value=2.6e-09 Score=98.78 Aligned_cols=98 Identities=18% Similarity=0.234 Sum_probs=70.8
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-cccccccccccccc-----ccccchhhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-TNHIDLIANETIEI-----IPHILDLCY 442 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-~~~v~~i~~d~~~~-----l~~~~d~i~ 442 (511)
+.+.++.+|||+|||+|.++..+++.++ .++|+++|+++++++.+.++.. ..++.++.+|.... ....+|.++
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~ 148 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIY 148 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEE
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEE
Confidence 5677899999999999999999999874 6899999999999988777654 25788877775431 112233332
Q ss_pred hcccCCcEEEEEcCCc---cHHHHHHHHHhCCCcEEEE
Q psy7829 443 LNLHRGAKVLEIGSGS---GYLATLMAHLVGPTGHVTG 477 (511)
Q Consensus 443 ~~l~~~~~vLD~~~g~---g~~~~~l~~~l~~~g~v~~ 477 (511)
.|+ ..+ -.+...+.+.|+|+|.++.
T Consensus 149 ---------~~~-~~~~~~~~~l~~~~~~LkpgG~l~i 176 (230)
T 1fbn_A 149 ---------EDV-AQPNQAEILIKNAKWFLKKGGYGMI 176 (230)
T ss_dssp ---------ECC-CSTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred ---------Eec-CChhHHHHHHHHHHHhCCCCcEEEE
Confidence 122 122 2335677788999999887
No 317
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.84 E-value=3.5e-09 Score=100.93 Aligned_cols=121 Identities=16% Similarity=0.080 Sum_probs=86.7
Q ss_pred CCCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cc-cccccccc
Q psy7829 354 PSSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TN-HIDLIANE 429 (511)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~-~v~~i~~d 429 (511)
|.+...+..++.. +...++.+|||+|||+|.+++.+++. +..+|+++|+++++++.+++|.. .. +++++++|
T Consensus 106 ~~te~lv~~~l~~--~~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D 181 (284)
T 1nv8_A 106 PETEELVELALEL--IRKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGE 181 (284)
T ss_dssp TTHHHHHHHHHHH--HHHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESS
T ss_pred hhHHHHHHHHHHH--hcccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECc
Confidence 5566777666665 33346789999999999999999988 56899999999988888777754 33 38899998
Q ss_pred ccccccccc---hhhhhcccCCc--------------EEEEEcCCccHHHHHHH-HHhCCCcEEEEh
Q psy7829 430 TIEIIPHIL---DLCYLNLHRGA--------------KVLEIGSGSGYLATLMA-HLVGPTGHVTGL 478 (511)
Q Consensus 430 ~~~~l~~~~---d~i~~~l~~~~--------------~vLD~~~g~g~~~~~l~-~~l~~~g~v~~~ 478 (511)
..+.++..+ |.++.+.+... ..++-++..-.+...+. +.++|+|.++..
T Consensus 182 ~~~~~~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 182 FLEPFKEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp TTGGGGGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred chhhcccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 877665667 87777632110 11222222235667777 888999998765
No 318
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.84 E-value=2.2e-09 Score=97.28 Aligned_cols=128 Identities=16% Similarity=0.081 Sum_probs=84.2
Q ss_pred HHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cccccccccccccc
Q psy7829 357 ERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETIEI 433 (511)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~~~ 433 (511)
......++......+.++.+|||+|||+|.++..+++. +..+|+++|+++.+++.+++++. ..+++++.+|..+.
T Consensus 44 ~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 121 (205)
T 3grz_A 44 HQTTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD 121 (205)
T ss_dssp HHHHHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT
T ss_pred CccHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc
Confidence 34444455542223678999999999999999998864 33699999999999888877754 44488888887665
Q ss_pred ccccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHhcCC
Q psy7829 434 IPHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL---EHMMDIAIESIANIST 494 (511)
Q Consensus 434 l~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~~~~ 494 (511)
.+..+|.++.+..... ...+...+.+.++|+|.++.. ..-.+...+.+.+.|+
T Consensus 122 ~~~~fD~i~~~~~~~~--------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf 177 (205)
T 3grz_A 122 VDGKFDLIVANILAEI--------LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSF 177 (205)
T ss_dssp CCSCEEEEEEESCHHH--------HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTE
T ss_pred CCCCceEEEECCcHHH--------HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCC
Confidence 5555665544321100 112234455678999998764 3334445556666665
No 319
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.84 E-value=3.1e-09 Score=99.76 Aligned_cols=113 Identities=24% Similarity=0.235 Sum_probs=77.0
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccc--cccccccccccc-cccchhhhhcccC
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNH--IDLIANETIEII-PHILDLCYLNLHR 447 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~--v~~i~~d~~~~l-~~~~d~i~~~l~~ 447 (511)
+.++.+|||+|||+|.+++.+++.. .+|+++|+++.+++.+++|...++ ++++.++..+.+ +..+|.++.+...
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g---~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLG---GKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYA 194 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhC---CeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECCcH
Confidence 6789999999999999999988753 499999999988888887765443 666666654432 2334444433211
Q ss_pred CcEEEEEcCCccHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHhcCC
Q psy7829 448 GAKVLEIGSGSGYLATLMAHLVGPTGHVTGL---EHMMDIAIESIANIST 494 (511)
Q Consensus 448 ~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~~~~ 494 (511)
+ ....+...+.+.++|+|.++.. ..-.+...+.+++.|+
T Consensus 195 ~--------~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf 236 (254)
T 2nxc_A 195 E--------LHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGF 236 (254)
T ss_dssp H--------HHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTC
T ss_pred H--------HHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCC
Confidence 0 1123456677889999998764 3344555566666776
No 320
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.83 E-value=6.2e-10 Score=103.68 Aligned_cols=100 Identities=22% Similarity=0.304 Sum_probs=71.2
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---cc-ccccccccccccccc--------c
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---ST-NHIDLIANETIEIIP--------H 436 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---~~-~~v~~i~~d~~~~l~--------~ 436 (511)
+...++.+|||||||+|+.++.+|+.++++++|+++|+++++++.+++++ +. ++++++.+|+.+.++ .
T Consensus 56 ~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~ 135 (242)
T 3r3h_A 56 IRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEH 135 (242)
T ss_dssp HHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSS
T ss_pred HhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCC
Confidence 34567889999999999999999998855799999999976666555544 44 478999988766543 3
Q ss_pred cchhhhhcccCCcEEEEEcC-CccHHHHHHHHHhCCCcEEEE
Q psy7829 437 ILDLCYLNLHRGAKVLEIGS-GSGYLATLMAHLVGPTGHVTG 477 (511)
Q Consensus 437 ~~d~i~~~l~~~~~vLD~~~-g~g~~~~~l~~~l~~~g~v~~ 477 (511)
.+|.++.+ ... ..-.+...+.+.|+|||.++.
T Consensus 136 ~fD~V~~d---------~~~~~~~~~l~~~~~~LkpGG~lv~ 168 (242)
T 3r3h_A 136 QFDFIFID---------ADKTNYLNYYELALKLVTPKGLIAI 168 (242)
T ss_dssp CEEEEEEE---------SCGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred CEeEEEEc---------CChHHhHHHHHHHHHhcCCCeEEEE
Confidence 35544432 221 122334567788999998876
No 321
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.83 E-value=5.4e-09 Score=96.38 Aligned_cols=113 Identities=21% Similarity=0.351 Sum_probs=80.8
Q ss_pred CCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCC-----CcEEEEEcCCHHHHHHHHhhcc--------cc
Q psy7829 355 SSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGP-----TGHVTGLEHMMDIAIESIANIS--------TN 421 (511)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~-----~~~v~~id~~~~~~~~~~~~~~--------~~ 421 (511)
..|...+.+++.+...+.++.+|||+|||+|+++..+++..+. .++|+++|+++++++.+++++. ..
T Consensus 66 ~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 145 (227)
T 1r18_A 66 SAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSG 145 (227)
T ss_dssp CCHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCC
Confidence 4667778888872225788999999999999999999987742 3599999999999888877654 35
Q ss_pred cccccccccccccc--ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 422 HIDLIANETIEIIP--HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 422 ~v~~i~~d~~~~l~--~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
+++++.+|.....+ ..+|.++. .+....+...+.+.|+|+|.++..
T Consensus 146 ~v~~~~~d~~~~~~~~~~fD~I~~-----------~~~~~~~~~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 146 QLLIVEGDGRKGYPPNAPYNAIHV-----------GAAAPDTPTELINQLASGGRLIVP 193 (227)
T ss_dssp SEEEEESCGGGCCGGGCSEEEEEE-----------CSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred ceEEEECCcccCCCcCCCccEEEE-----------CCchHHHHHHHHHHhcCCCEEEEE
Confidence 68888777654332 23443322 222233447788889999988765
No 322
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.83 E-value=7.7e-09 Score=95.47 Aligned_cols=124 Identities=23% Similarity=0.282 Sum_probs=83.8
Q ss_pred cCCCCCCEEEEEecc-ccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccc--ccccccccc--cc-cccccchhhh
Q psy7829 369 LNLHRGAKVLEIGSG-SGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTN--HIDLIANET--IE-IIPHILDLCY 442 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~--~v~~i~~d~--~~-~l~~~~d~i~ 442 (511)
..++++.+|||+||| +|.+++.+++..+ .+|+++|+++++++.+++|+... +++++.+|. .. ..+..+|.++
T Consensus 51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~ 128 (230)
T 3evz_A 51 TFLRGGEVALEIGTGHTAMMALMAEKFFN--CKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIF 128 (230)
T ss_dssp TTCCSSCEEEEECCTTTCHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEE
T ss_pred hhcCCCCEEEEcCCCHHHHHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEE
Confidence 456789999999999 9999999998863 89999999999998888776533 678888874 22 2235577776
Q ss_pred hcccCCcE--------EEEEcCC------ccHHHHHHHHHhCCCcEEEEh----HHHHHHHHHHHHhcCC
Q psy7829 443 LNLHRGAK--------VLEIGSG------SGYLATLMAHLVGPTGHVTGL----EHMMDIAIESIANIST 494 (511)
Q Consensus 443 ~~l~~~~~--------vLD~~~g------~g~~~~~l~~~l~~~g~v~~~----~~ml~~a~~~~~~~~~ 494 (511)
.+...... ...+..+ .-.+...+.+.|+|+|.++.+ ..-.+...+.+.+.|+
T Consensus 129 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~ 198 (230)
T 3evz_A 129 SAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGY 198 (230)
T ss_dssp ECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred ECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCC
Confidence 65332110 0001111 123445566778999998875 4555666677777776
No 323
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.83 E-value=1e-08 Score=106.41 Aligned_cols=122 Identities=15% Similarity=0.064 Sum_probs=91.6
Q ss_pred CcccchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCC-----------------CceEEEEeCCHHHHHH
Q psy7829 111 AGVMNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGP-----------------TGKVIGVEHIPELIEA 173 (511)
Q Consensus 111 ~~~~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~-----------------~~~v~~iD~~~~~~~~ 173 (511)
|...+.+.+...+++.+. ..++.+|||.|||+|.+...+++.+.. ..+++|+|+++.+++.
T Consensus 149 G~fyTP~~iv~~mv~~l~--p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~l 226 (541)
T 2ar0_A 149 GQYFTPRPLIKTIIHLLK--PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRL 226 (541)
T ss_dssp -CCCCCHHHHHHHHHHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHH
T ss_pred CeeeCCHHHHHHHHHHhc--cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHH
Confidence 444444446666777775 567889999999999999888876521 1369999999999999
Q ss_pred HHHHHhccCCCcCCCCC-----eEEEEccCCCCC-CCCCCccEEEecCCCC--------------------chHHHHHhh
Q psy7829 174 SLRNISKGNKDLLDSGR-----VRIVEADAREGY-LPEAPYDVIYYGGCVS--------------------EVPSRVLNQ 227 (511)
Q Consensus 174 a~~~~~~~~~~~~~~~~-----v~~~~~d~~~~~-~~~~~fD~I~~~~~~~--------------------~~~~~~~~~ 227 (511)
|+.++...+ ..+ +.+.++|..... .....||+|++++|+. .+...+.+.
T Consensus 227 A~~nl~l~g-----i~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~ 301 (541)
T 2ar0_A 227 ALMNCLLHD-----IEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIET 301 (541)
T ss_dssp HHHHHHTTT-----CCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHhC-----CCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHH
Confidence 999987654 222 788999976432 2236799999998873 144778999
Q ss_pred cccCcEEEEEEc
Q psy7829 228 LKKGGRILAPIG 239 (511)
Q Consensus 228 LkpgG~l~~~~~ 239 (511)
|||||++++.+.
T Consensus 302 Lk~gGr~a~V~p 313 (541)
T 2ar0_A 302 LHPGGRAAVVVP 313 (541)
T ss_dssp EEEEEEEEEEEE
T ss_pred hCCCCEEEEEec
Confidence 999999988664
No 324
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.82 E-value=1.4e-09 Score=96.07 Aligned_cols=81 Identities=17% Similarity=0.219 Sum_probs=67.5
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC---CCCC
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL---PEAP 207 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~ 207 (511)
+++|.+|||+|||. | ++|+|+.|++.|+++... +++++++|+.+... ++++
T Consensus 10 ~~~g~~vL~~~~g~----------------v-~vD~s~~ml~~a~~~~~~---------~~~~~~~d~~~~~~~~~~~~~ 63 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------S-PVEALKGLVDKLQALTGN---------EGRVSVENIKQLLQSAHKESS 63 (176)
T ss_dssp CCTTSEEEEEECTT----------------S-CHHHHHHHHHHHHHHTTT---------TSEEEEEEGGGGGGGCCCSSC
T ss_pred CCCCCEEEEecCCc----------------e-eeeCCHHHHHHHHHhccc---------CcEEEEechhcCccccCCCCC
Confidence 67899999999986 1 389999999999988543 58999999876443 4578
Q ss_pred ccEEEecCCCCch-------HHHHHhhcccCcEEEEE
Q psy7829 208 YDVIYYGGCVSEV-------PSRVLNQLKKGGRILAP 237 (511)
Q Consensus 208 fD~I~~~~~~~~~-------~~~~~~~LkpgG~l~~~ 237 (511)
||+|++..+++++ .+++++.|||||++++.
T Consensus 64 fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 64 FDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp EEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred EeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEE
Confidence 9999998887766 48899999999999983
No 325
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.82 E-value=1.1e-08 Score=94.12 Aligned_cols=113 Identities=27% Similarity=0.436 Sum_probs=80.0
Q ss_pred CCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc--------ccccccc
Q psy7829 355 SSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS--------TNHIDLI 426 (511)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~--------~~~v~~i 426 (511)
..+...+.++......+.++.+|||+|||+|+.+..+++.+++.++|+++|+++.+++.+++++. ..+++++
T Consensus 59 ~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~ 138 (226)
T 1i1n_A 59 SAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLV 138 (226)
T ss_dssp CCHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEE
T ss_pred cCHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEE
Confidence 35677777777622237889999999999999999999988777899999999999888777654 3467777
Q ss_pred cccccccc--cccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 427 ANETIEII--PHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 427 ~~d~~~~l--~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+|..... ...+|.++.. ...-.+...+.+.|+|+|.++..
T Consensus 139 ~~d~~~~~~~~~~fD~i~~~-----------~~~~~~~~~~~~~LkpgG~lv~~ 181 (226)
T 1i1n_A 139 VGDGRMGYAEEAPYDAIHVG-----------AAAPVVPQALIDQLKPGGRLILP 181 (226)
T ss_dssp ESCGGGCCGGGCCEEEEEEC-----------SBBSSCCHHHHHTEEEEEEEEEE
T ss_pred ECCcccCcccCCCcCEEEEC-----------CchHHHHHHHHHhcCCCcEEEEE
Confidence 77754322 1223433221 11123346778889999988765
No 326
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.81 E-value=4.7e-09 Score=98.91 Aligned_cols=124 Identities=17% Similarity=0.181 Sum_probs=82.4
Q ss_pred cCCC-CCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----cccccccccccccc----cccch
Q psy7829 369 LNLH-RGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NHIDLIANETIEII----PHILD 439 (511)
Q Consensus 369 ~~~~-~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~v~~i~~d~~~~l----~~~~d 439 (511)
+.++ ++.+|||+|||+|..++.+++.. + .+|+++|+++++++.+++|+.. .+++++++|..+.. +..+|
T Consensus 44 ~~~~~~~~~vLDlG~G~G~~~~~la~~~-~-~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD 121 (259)
T 3lpm_A 44 SYLPIRKGKIIDLCSGNGIIPLLLSTRT-K-AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERAD 121 (259)
T ss_dssp CCCCSSCCEEEETTCTTTHHHHHHHTTC-C-CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEE
T ss_pred hcCCCCCCEEEEcCCchhHHHHHHHHhc-C-CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCcc
Confidence 6777 89999999999999999999875 3 4999999999999888877653 24788888876654 34577
Q ss_pred hhhhcccCCcE----EEE------E-----cCCccHHHHHHHHHhCCCcEEEEh--HHHHHHHHHHHHhcCC
Q psy7829 440 LCYLNLHRGAK----VLE------I-----GSGSGYLATLMAHLVGPTGHVTGL--EHMMDIAIESIANIST 494 (511)
Q Consensus 440 ~i~~~l~~~~~----vLD------~-----~~g~g~~~~~l~~~l~~~g~v~~~--~~ml~~a~~~~~~~~~ 494 (511)
.++.+.+-... ... + .+....+...+.+.|+|+|.++.+ ..-+....+.+.+.++
T Consensus 122 ~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~ 193 (259)
T 3lpm_A 122 IVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRL 193 (259)
T ss_dssp EEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTE
T ss_pred EEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCC
Confidence 77665432111 000 0 011123556777889999998877 2333333344444444
No 327
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.81 E-value=1.1e-08 Score=96.43 Aligned_cols=109 Identities=11% Similarity=0.112 Sum_probs=79.0
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc---c----ccccccccccccc-------
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST---N----HIDLIANETIEII------- 434 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~---~----~v~~i~~d~~~~l------- 434 (511)
+...++.+|||+|||+|.+++.+++.. |..+|+++|+++++++.+++|+.. + +++++++|..+..
T Consensus 32 ~~~~~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~ 110 (260)
T 2ozv_A 32 VADDRACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAG 110 (260)
T ss_dssp CCCCSCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTT
T ss_pred hcccCCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhc
Confidence 567788999999999999999999987 568999999999999998888765 3 4778888866542
Q ss_pred --cccchhhhhcccCCcE------------EE-EEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 435 --PHILDLCYLNLHRGAK------------VL-EIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 435 --~~~~d~i~~~l~~~~~------------vL-D~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
+..+|.++.+.+.... .. ...++.-.+...+.+.|+|+|.++.+
T Consensus 111 ~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 111 LPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp CCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 3457777776432211 00 11123445566677889999999877
No 328
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.81 E-value=9.1e-09 Score=90.06 Aligned_cols=116 Identities=16% Similarity=0.092 Sum_probs=77.9
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccc--ccccccccc
Q psy7829 353 GPSSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTN--HIDLIANET 430 (511)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~--~v~~i~~d~ 430 (511)
.|.+......++......++++.+|||+|||+|.++..+++.. .+|+++|+++++++.+++++... +++++++|.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~ 97 (171)
T 1ws6_A 21 RPSPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEG---WEAVLVEKDPEAVRLLKENVRRTGLGARVVALPV 97 (171)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTT---CEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH
T ss_pred CCCHHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccH
Confidence 3556666666666522224478999999999999999999875 34999999999998887776532 688888886
Q ss_pred cccccc------cchhhhhcccCCcEEEEEcCCccHHHHHHH--HHhCCCcEEEEh
Q psy7829 431 IEIIPH------ILDLCYLNLHRGAKVLEIGSGSGYLATLMA--HLVGPTGHVTGL 478 (511)
Q Consensus 431 ~~~l~~------~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~--~~l~~~g~v~~~ 478 (511)
.+.++. .+|.++.+..-. ...-.....+. +.++|+|.++..
T Consensus 98 ~~~~~~~~~~~~~~D~i~~~~~~~-------~~~~~~~~~~~~~~~L~~gG~~~~~ 146 (171)
T 1ws6_A 98 EVFLPEAKAQGERFTVAFMAPPYA-------MDLAALFGELLASGLVEAGGLYVLQ 146 (171)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCTT-------SCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred HHHHHhhhccCCceEEEEECCCCc-------hhHHHHHHHHHhhcccCCCcEEEEE
Confidence 654331 355554442211 11223445555 668999988765
No 329
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.81 E-value=2.7e-09 Score=98.00 Aligned_cols=113 Identities=13% Similarity=0.094 Sum_probs=77.1
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cc-ccccccccccccccc--cchhhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TN-HIDLIANETIEIIPH--ILDLCY 442 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~-~v~~i~~d~~~~l~~--~~d~i~ 442 (511)
--++++.+|||||||+|++++.+|+.. +..+|+|+|+++..++.|++|+. .. +++++.+|..+.+.. .+|.
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~-- 93 (244)
T 3gnl_A 17 SYITKNERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDT-- 93 (244)
T ss_dssp TTCCSSEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCE--
T ss_pred HhCCCCCEEEEECCccHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccE--
Confidence 356789999999999999999999874 66799999999988888887765 32 378888887765542 1332
Q ss_pred hcccCCcEEEEEcCCccH--HHH---HHHHHhCCCcEEEEh-HHHHHHHHHHHHhcCC
Q psy7829 443 LNLHRGAKVLEIGSGSGY--LAT---LMAHLVGPTGHVTGL-EHMMDIAIESIANIST 494 (511)
Q Consensus 443 ~~l~~~~~vLD~~~g~g~--~~~---~l~~~l~~~g~v~~~-~~ml~~a~~~~~~~~~ 494 (511)
|+ -||.|. +.. .....++++++++.- ..-.+..++.+.+.|+
T Consensus 94 --------Iv--iagmGg~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~~~Gf 141 (244)
T 3gnl_A 94 --------IV--IAGMGGTLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQNNW 141 (244)
T ss_dssp --------EE--EEEECHHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHHHTE
T ss_pred --------EE--EeCCchHHHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHHHCCC
Confidence 22 144443 222 223456777887766 2234455666666665
No 330
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.80 E-value=6.1e-09 Score=96.69 Aligned_cols=99 Identities=18% Similarity=0.243 Sum_probs=71.8
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-ccccccccccccccc---------c
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NHIDLIANETIEIIP---------H 436 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~v~~i~~d~~~~l~---------~ 436 (511)
...++.+|||||||+|+.++.+++.++++++|+++|+++++++.+++++. . ++++++.+|+.+.++ .
T Consensus 67 ~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 67 KLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred HhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCC
Confidence 44578899999999999999999988557999999999998888877764 3 358888888766543 2
Q ss_pred cchhhhhcccCCcEEEEEcC-CccHHHHHHHHHhCCCcEEEE
Q psy7829 437 ILDLCYLNLHRGAKVLEIGS-GSGYLATLMAHLVGPTGHVTG 477 (511)
Q Consensus 437 ~~d~i~~~l~~~~~vLD~~~-g~g~~~~~l~~~l~~~g~v~~ 477 (511)
.+|.++. |..+ ..-.+...+.+.|+|||.++.
T Consensus 147 ~fD~I~~---------d~~~~~~~~~l~~~~~~L~pGG~lv~ 179 (237)
T 3c3y_A 147 SYDFGFV---------DADKPNYIKYHERLMKLVKVGGIVAY 179 (237)
T ss_dssp CEEEEEE---------CSCGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred CcCEEEE---------CCchHHHHHHHHHHHHhcCCCeEEEE
Confidence 3444433 2222 122344566788899998875
No 331
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.80 E-value=2.3e-08 Score=95.08 Aligned_cols=88 Identities=18% Similarity=0.342 Sum_probs=67.9
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---ccccccccccc
Q psy7829 353 GPSSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---STNHIDLIANE 429 (511)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---~~~~v~~i~~d 429 (511)
.|.+...+..++.. +. .++.+|||+|||+|..++.+++.. +..+|+++|+++++++.+++|. +..+++++.+|
T Consensus 92 r~~te~l~~~~l~~--~~-~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d 167 (276)
T 2b3t_A 92 RPDTECLVEQALAR--LP-EQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSD 167 (276)
T ss_dssp CTTHHHHHHHHHHH--SC-SSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCS
T ss_pred CchHHHHHHHHHHh--cc-cCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcc
Confidence 35566777777665 44 678899999999999999999887 6689999999998888777665 44578888888
Q ss_pred ccccc-cccchhhhhc
Q psy7829 430 TIEII-PHILDLCYLN 444 (511)
Q Consensus 430 ~~~~l-~~~~d~i~~~ 444 (511)
..+.+ +..+|.++.+
T Consensus 168 ~~~~~~~~~fD~Iv~n 183 (276)
T 2b3t_A 168 WFSALAGQQFAMIVSN 183 (276)
T ss_dssp TTGGGTTCCEEEEEEC
T ss_pred hhhhcccCCccEEEEC
Confidence 76654 3456766655
No 332
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.80 E-value=4.2e-09 Score=96.93 Aligned_cols=100 Identities=17% Similarity=0.216 Sum_probs=71.7
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-ccccccccccccccc--------c
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NHIDLIANETIEIIP--------H 436 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~v~~i~~d~~~~l~--------~ 436 (511)
+...++.+|||+|||+|+.++.+++.+++.++|+++|+++++++.+++++. . ++++++.+|..+.++ .
T Consensus 60 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (225)
T 3tr6_A 60 VKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAW 139 (225)
T ss_dssp HHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTT
T ss_pred HHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCC
Confidence 344578899999999999999999887547999999999998888877764 3 348888888755543 2
Q ss_pred cchhhhhcccCCcEEEEEcC-CccHHHHHHHHHhCCCcEEEE
Q psy7829 437 ILDLCYLNLHRGAKVLEIGS-GSGYLATLMAHLVGPTGHVTG 477 (511)
Q Consensus 437 ~~d~i~~~l~~~~~vLD~~~-g~g~~~~~l~~~l~~~g~v~~ 477 (511)
.+|.++.+ ... ....+...+.+.|+|+|.++.
T Consensus 140 ~fD~v~~~---------~~~~~~~~~l~~~~~~L~pgG~lv~ 172 (225)
T 3tr6_A 140 QYDLIYID---------ADKANTDLYYEESLKLLREGGLIAV 172 (225)
T ss_dssp CEEEEEEC---------SCGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred CccEEEEC---------CCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 34443321 111 123345667788999999876
No 333
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.80 E-value=2e-09 Score=98.11 Aligned_cols=88 Identities=24% Similarity=0.306 Sum_probs=53.5
Q ss_pred CCHHHHHHHHHHhhcCC-CCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccc--cccccccccc
Q psy7829 355 SSERSIAHILDLCYLNL-HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTN--HIDLIANETI 431 (511)
Q Consensus 355 ~~~~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~--~v~~i~~d~~ 431 (511)
.+...+..++.. +.. .++.+|||+|||+|..+..+++.. ++.+|+++|+++.+++.+++++... +++++++|..
T Consensus 13 ~~~~~~~~~~~~--l~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~ 89 (215)
T 4dzr_A 13 DTEVLVEEAIRF--LKRMPSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGI 89 (215)
T ss_dssp HHHHHHHHHHHH--HTTCCTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC-------------------CCHHHHH
T ss_pred cHHHHHHHHHHH--hhhcCCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchH
Confidence 344555555555 443 688999999999999999999886 6689999999999998888776643 5788888765
Q ss_pred cccc------ccchhhhhcc
Q psy7829 432 EIIP------HILDLCYLNL 445 (511)
Q Consensus 432 ~~l~------~~~d~i~~~l 445 (511)
+.++ ..+|.++.+.
T Consensus 90 ~~~~~~~~~~~~fD~i~~np 109 (215)
T 4dzr_A 90 EWLIERAERGRPWHAIVSNP 109 (215)
T ss_dssp HHHHHHHHTTCCBSEEEECC
T ss_pred hhhhhhhhccCcccEEEECC
Confidence 5443 4677776653
No 334
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.80 E-value=5e-09 Score=97.46 Aligned_cols=111 Identities=17% Similarity=0.211 Sum_probs=77.1
Q ss_pred CCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cc-ccccccccc
Q psy7829 355 SSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TN-HIDLIANET 430 (511)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~-~v~~i~~d~ 430 (511)
..+.....+..+ +...++.+|||||||+|+.+..+++.+++.++|+++|+++++++.+++++. .. +++++.+|.
T Consensus 44 ~~~~~~~~l~~l--~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~ 121 (239)
T 2hnk_A 44 ISPEEGQFLNIL--TKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSA 121 (239)
T ss_dssp CCHHHHHHHHHH--HHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred cCHHHHHHHHHH--HHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH
Confidence 355555555554 455688999999999999999999987546899999999999888877753 33 378888876
Q ss_pred ccccc-------------------ccchhhhhcccCCcEEEEEcCCcc---HHHHHHHHHhCCCcEEEEh
Q psy7829 431 IEIIP-------------------HILDLCYLNLHRGAKVLEIGSGSG---YLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 431 ~~~l~-------------------~~~d~i~~~l~~~~~vLD~~~g~g---~~~~~l~~~l~~~g~v~~~ 478 (511)
.+.++ ..+|.++. ..+.. .+...+.+.++|+|.++..
T Consensus 122 ~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~-----------~~~~~~~~~~l~~~~~~L~pgG~lv~~ 180 (239)
T 2hnk_A 122 LETLQVLIDSKSAPSWASDFAFGPSSIDLFFL-----------DADKENYPNYYPLILKLLKPGGLLIAD 180 (239)
T ss_dssp HHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEE-----------CSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHhhcccccccccccCCCCCcCEEEE-----------eCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 55433 12332221 12222 3346677889999998764
No 335
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.79 E-value=3.8e-09 Score=97.93 Aligned_cols=109 Identities=14% Similarity=0.135 Sum_probs=73.1
Q ss_pred HHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHH---hCCCcEEEEEcCCHHHHHHHHhhcccccccccccccccc
Q psy7829 357 ERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHL---VGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEI 433 (511)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~---~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~ 433 (511)
+.....+..+ +...++.+|||||||+|+.++.+|+. ++++++|+++|+++++++.++ +. ..+++++++|..+.
T Consensus 67 p~~~~~l~~~--l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~-~~-~~~v~~~~gD~~~~ 142 (236)
T 2bm8_A 67 PDTQAVYHDM--LWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA-SD-MENITLHQGDCSDL 142 (236)
T ss_dssp HHHHHHHHHH--HHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-GG-CTTEEEEECCSSCS
T ss_pred HHHHHHHHHH--HHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-cc-CCceEEEECcchhH
Confidence 5555555554 33446789999999999999999987 456799999999988877665 22 36789998887653
Q ss_pred --cc---c-cchhhhhcccCCcEEEEEcC-CccHHHHHHHH-HhCCCcEEEEh
Q psy7829 434 --IP---H-ILDLCYLNLHRGAKVLEIGS-GSGYLATLMAH-LVGPTGHVTGL 478 (511)
Q Consensus 434 --l~---~-~~d~i~~~l~~~~~vLD~~~-g~g~~~~~l~~-~l~~~g~v~~~ 478 (511)
++ . .+|.++. |.+- ..-.....+.+ .|+|||.++..
T Consensus 143 ~~l~~~~~~~fD~I~~---------d~~~~~~~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 143 TTFEHLREMAHPLIFI---------DNAHANTFNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp GGGGGGSSSCSSEEEE---------ESSCSSHHHHHHHHHHHTCCTTCEEEEC
T ss_pred HHHHhhccCCCCEEEE---------CCchHhHHHHHHHHHHhhCCCCCEEEEE
Confidence 22 1 2343332 2221 11223344554 89999999883
No 336
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.79 E-value=9.2e-09 Score=99.24 Aligned_cols=112 Identities=18% Similarity=0.080 Sum_probs=77.4
Q ss_pred HHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc---c-ccccccccccccccc
Q psy7829 361 AHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST---N-HIDLIANETIEIIPH 436 (511)
Q Consensus 361 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~---~-~v~~i~~d~~~~l~~ 436 (511)
..++.. +.++++.+|||||||+|.++..+++..+ .+|+++|+++++++.++++... . +++++.+|..+. +.
T Consensus 62 ~~~~~~--~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~ 136 (302)
T 3hem_A 62 KLALDK--LNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-DE 136 (302)
T ss_dssp HHHHHT--TCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-CC
T ss_pred HHHHHH--cCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-CC
Confidence 344554 6778999999999999999999999875 8999999999999888777542 2 678888887654 55
Q ss_pred cchhhhhcccCCcEEEEEcC--Cc---cHHHHHHHHHhCCCcEEEEh
Q psy7829 437 ILDLCYLNLHRGAKVLEIGS--GS---GYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 437 ~~d~i~~~l~~~~~vLD~~~--g~---g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+|.++....-. .+.|... |. ..+...+.+.|+|+|.++..
T Consensus 137 ~fD~v~~~~~~~-~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 182 (302)
T 3hem_A 137 PVDRIVSLGAFE-HFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH 182 (302)
T ss_dssp CCSEEEEESCGG-GTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEE
T ss_pred CccEEEEcchHH-hcCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 566554321000 0000000 11 24566778889999998765
No 337
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.79 E-value=8.6e-09 Score=96.40 Aligned_cols=101 Identities=15% Similarity=0.034 Sum_probs=68.1
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc--------------------cccccccccc
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS--------------------TNHIDLIANE 429 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~--------------------~~~v~~i~~d 429 (511)
...++.+|||+|||+|..+..||+.. .+|+|||+++.+++.++++.+ ..+++++++|
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~G---~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D 141 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADRG---HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS 141 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHTT---CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHCC---CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc
Confidence 34678999999999999999999764 699999999999998876553 2568888887
Q ss_pred cccccc---ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEE
Q psy7829 430 TIEIIP---HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVT 476 (511)
Q Consensus 430 ~~~~l~---~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~ 476 (511)
..+... ..||.++....-.. +. ......+...+.+.|+|||.++
T Consensus 142 ~~~l~~~~~~~FD~V~~~~~l~~--l~-~~~~~~~l~~~~~~LkpGG~l~ 188 (252)
T 2gb4_A 142 IFDLPRANIGKFDRIWDRGALVA--IN-PGDHDRYADIILSLLRKEFQYL 188 (252)
T ss_dssp TTTGGGGCCCCEEEEEESSSTTT--SC-GGGHHHHHHHHHHTEEEEEEEE
T ss_pred cccCCcccCCCEEEEEEhhhhhh--CC-HHHHHHHHHHHHHHcCCCeEEE
Confidence 655432 23554432110000 00 0001234567788899999975
No 338
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.78 E-value=1.2e-08 Score=100.78 Aligned_cols=124 Identities=19% Similarity=0.123 Sum_probs=88.7
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cccccccccc
Q psy7829 353 GPSSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANE 429 (511)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d 429 (511)
.|..+..++.++.+ +...++.+|||+|||+|.+++.+|+..+++.+|+|+|+++++++.+++|+. ..+++++++|
T Consensus 185 a~l~~~la~~l~~~--~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D 262 (354)
T 3tma_A 185 GSLTPVLAQALLRL--ADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRAD 262 (354)
T ss_dssp CSCCHHHHHHHHHH--TTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred CCcCHHHHHHHHHH--hCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCC
Confidence 35667777777776 677889999999999999999999987667899999999999888877765 3368888888
Q ss_pred cccccc--ccchhhhhcccCCcEEEEEcCC---ccHHHHHHHHHhCCCcEEEEh
Q psy7829 430 TIEIIP--HILDLCYLNLHRGAKVLEIGSG---SGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 430 ~~~~l~--~~~d~i~~~l~~~~~vLD~~~g---~g~~~~~l~~~l~~~g~v~~~ 478 (511)
..+... ..+|.++.|.+-+.++-+.... ...+...+.+.++|+|.++.+
T Consensus 263 ~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 316 (354)
T 3tma_A 263 ARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALL 316 (354)
T ss_dssp GGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred hhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 766432 2356666665555443211100 023455677788999998887
No 339
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.78 E-value=1.3e-08 Score=100.80 Aligned_cols=91 Identities=14% Similarity=0.264 Sum_probs=74.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
+.++.+|||||||+|.++..+++.+ |..+++++|+ +.+++.+++ .++++++.+|+.+.. + .||+
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~~-~--~~D~ 254 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTG-----------NENLNFVGGDMFKSI-P--SADA 254 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCC-----------CSSEEEEECCTTTCC-C--CCSE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhccc-----------CCCcEEEeCccCCCC-C--CceE
Confidence 3467899999999999999999997 7789999999 788765542 236999999998732 2 4999
Q ss_pred EEecCCCCch--------HHHHHhhccc---CcEEEEE
Q psy7829 211 IYYGGCVSEV--------PSRVLNQLKK---GGRILAP 237 (511)
Q Consensus 211 I~~~~~~~~~--------~~~~~~~Lkp---gG~l~~~ 237 (511)
|++...++++ ++++.+.||| ||++++.
T Consensus 255 v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 255 VLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred EEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 9999888643 4788999999 9999884
No 340
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.77 E-value=7.2e-09 Score=95.93 Aligned_cols=111 Identities=21% Similarity=0.387 Sum_probs=77.7
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-ccccccccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NHIDLIANETI 431 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~v~~i~~d~~ 431 (511)
.+.....+... +...++.+|||+|||+|+.+..+++.. |.++|+++|+++++++.+++++. . ++++++.+|..
T Consensus 39 ~~~~~~~l~~~--~~~~~~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 115 (233)
T 2gpy_A 39 DLLGMESLLHL--LKMAAPARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDAL 115 (233)
T ss_dssp CHHHHHHHHHH--HHHHCCSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGG
T ss_pred CHHHHHHHHHH--HhccCCCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHH
Confidence 44545444444 455688999999999999999999987 56899999999999888877764 3 35888888766
Q ss_pred cccc-----ccchhhhhcccCCcEEEEEcCC-ccHHHHHHHHHhCCCcEEEEh
Q psy7829 432 EIIP-----HILDLCYLNLHRGAKVLEIGSG-SGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 432 ~~l~-----~~~d~i~~~l~~~~~vLD~~~g-~g~~~~~l~~~l~~~g~v~~~ 478 (511)
+.++ ..+|.++ ++.++. ...+...+.+.|+|+|.++..
T Consensus 116 ~~~~~~~~~~~fD~I~---------~~~~~~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 116 QLGEKLELYPLFDVLF---------IDAAKGQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp GSHHHHTTSCCEEEEE---------EEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHhcccCCCccEEE---------ECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 5432 2344333 233321 234456677888999988764
No 341
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.77 E-value=1.9e-08 Score=92.86 Aligned_cols=108 Identities=25% Similarity=0.234 Sum_probs=79.7
Q ss_pred CCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccc-cccccccccccc
Q psy7829 355 SSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTN-HIDLIANETIEI 433 (511)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~-~v~~i~~d~~~~ 433 (511)
..+..+..++.. +.+.++.+|||+|||+|.++..+++.. .+|+++|+++++++.++++.... +++++.+|..+.
T Consensus 54 ~~~~~~~~~~~~--~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~ 128 (231)
T 1vbf_A 54 TALNLGIFMLDE--LDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLG 128 (231)
T ss_dssp CCHHHHHHHHHH--TTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGC
T ss_pred CCHHHHHHHHHh--cCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccc
Confidence 356777788877 678899999999999999999999875 79999999999999988877643 688887776552
Q ss_pred cc--ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 434 IP--HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 434 l~--~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+ ..+|.++... ....+...+.+.++|+|.++..
T Consensus 129 ~~~~~~fD~v~~~~-----------~~~~~~~~~~~~L~pgG~l~~~ 164 (231)
T 1vbf_A 129 YEEEKPYDRVVVWA-----------TAPTLLCKPYEQLKEGGIMILP 164 (231)
T ss_dssp CGGGCCEEEEEESS-----------BBSSCCHHHHHTEEEEEEEEEE
T ss_pred cccCCCccEEEECC-----------cHHHHHHHHHHHcCCCcEEEEE
Confidence 22 2344333221 1122335677888999988766
No 342
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.77 E-value=9e-09 Score=96.00 Aligned_cols=93 Identities=13% Similarity=0.044 Sum_probs=71.7
Q ss_pred cchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEE
Q psy7829 114 MNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRI 193 (511)
Q Consensus 114 ~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 193 (511)
+..|.+...+++.+. +.++.+|||||||+|.++. +++ . ...+|+++|+++.+++.+++++.. .+++++
T Consensus 4 L~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~-------~~~v~~ 71 (252)
T 1qyr_A 4 LNDQFVIDSIVSAIN--PQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFL-------GPKLTI 71 (252)
T ss_dssp ECCHHHHHHHHHHHC--CCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTT-------GGGEEE
T ss_pred cCCHHHHHHHHHhcC--CCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhcc-------CCceEE
Confidence 346778888888886 7788999999999999999 653 3 434499999999999999987654 247999
Q ss_pred EEccCCCCCCCC-----CCccEEEecCCCC
Q psy7829 194 VEADAREGYLPE-----APYDVIYYGGCVS 218 (511)
Q Consensus 194 ~~~d~~~~~~~~-----~~fD~I~~~~~~~ 218 (511)
+++|+.....+. +..|.|+++.++.
T Consensus 72 i~~D~~~~~~~~~~~~~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 72 YQQDAMTFNFGELAEKMGQPLRVFGNLPYN 101 (252)
T ss_dssp ECSCGGGCCHHHHHHHHTSCEEEEEECCTT
T ss_pred EECchhhCCHHHhhcccCCceEEEECCCCC
Confidence 999997632211 2347888888874
No 343
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.75 E-value=1e-08 Score=103.43 Aligned_cols=100 Identities=17% Similarity=0.203 Sum_probs=75.3
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhh---ccccccccccccccccc---cccchhhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIAN---ISTNHIDLIANETIEII---PHILDLCY 442 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~---~~~~~v~~i~~d~~~~l---~~~~d~i~ 442 (511)
+.+.+|.+|||+|||+|..|+.+|..+++.++|+++|+++++++.+.+| .+..|+.++++|..... +..||
T Consensus 101 L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD--- 177 (456)
T 3m4x_A 101 AAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFD--- 177 (456)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEE---
T ss_pred cCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCC---
Confidence 5678999999999999999999999886668999999998777766555 45677888888765432 22333
Q ss_pred hcccCCcEEEEEcC-CccH-------------------------HHHHHHHHhCCCcEEEE
Q psy7829 443 LNLHRGAKVLEIGS-GSGY-------------------------LATLMAHLVGPTGHVTG 477 (511)
Q Consensus 443 ~~l~~~~~vLD~~~-g~g~-------------------------~~~~l~~~l~~~g~v~~ 477 (511)
..++|..| |+|. +...+++.|+|||.++-
T Consensus 178 ------~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvY 232 (456)
T 3m4x_A 178 ------RIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIY 232 (456)
T ss_dssp ------EEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ------EEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 34667776 6773 34556677899999863
No 344
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.75 E-value=1.2e-08 Score=89.38 Aligned_cols=123 Identities=12% Similarity=0.104 Sum_probs=79.1
Q ss_pred HHHHHHHHhhcCC--CCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccccccccccccccccc-
Q psy7829 359 SIAHILDLCYLNL--HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEIIP- 435 (511)
Q Consensus 359 ~~~~~~~~~~~~~--~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~l~- 435 (511)
++..++.. +.. .++.+|||+|||+|.++..+++.. +|+|+|+++.+++. .++++++++|..+..+
T Consensus 9 ~~~~l~~~--l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~------~~~~~~~~~d~~~~~~~ 76 (170)
T 3q87_B 9 DTYTLMDA--LEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES------HRGGNLVRADLLCSINQ 76 (170)
T ss_dssp HHHHHHHH--HHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT------CSSSCEEECSTTTTBCG
T ss_pred cHHHHHHH--HHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc------ccCCeEEECChhhhccc
Confidence 34444444 333 567899999999999999998643 99999999999887 5568888888665443
Q ss_pred ccchhhhhcccCCcEE----EEEcCCccHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHhcCC
Q psy7829 436 HILDLCYLNLHRGAKV----LEIGSGSGYLATLMAHLVGPTGHVTGL---EHMMDIAIESIANIST 494 (511)
Q Consensus 436 ~~~d~i~~~l~~~~~v----LD~~~g~g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~~~~ 494 (511)
..+|.++.+..-...- +.-+...-.+...+.+.+ |+|.++.+ ..-.+..++.+++.|+
T Consensus 77 ~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf 141 (170)
T 3q87_B 77 ESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGY 141 (170)
T ss_dssp GGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTC
T ss_pred CCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCC
Confidence 5677766653321100 001111223445666777 99998876 2334445555666666
No 345
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.75 E-value=8.7e-08 Score=90.25 Aligned_cols=107 Identities=20% Similarity=0.170 Sum_probs=85.0
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC-CCCCccE
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL-PEAPYDV 210 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~ 210 (511)
+...+||-||.|.|..+..+++.. +..+|+.+|+++.+++.|++.+.....+.+..++++++.+|+..... ..++||+
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 457899999999999999999874 56789999999999999999875422111346799999999986443 3478999
Q ss_pred EEecCCC----------CchHHHHHhhcccCcEEEEEEc
Q psy7829 211 IYYGGCV----------SEVPSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 211 I~~~~~~----------~~~~~~~~~~LkpgG~l~~~~~ 239 (511)
|+++..- ..+.+.+++.|+|||.++.-.+
T Consensus 161 Ii~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecC
Confidence 9987543 2345899999999999998544
No 346
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.75 E-value=1.7e-08 Score=92.68 Aligned_cols=67 Identities=24% Similarity=0.372 Sum_probs=54.5
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-ccccccccccccccc
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NHIDLIANETIEIIP 435 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~v~~i~~d~~~~l~ 435 (511)
+...++.+|||||||+|+.++.+|+.++++++|+++|+++++++.+++++. . ++++++.+|..+.++
T Consensus 54 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~ 124 (221)
T 3u81_A 54 IREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIP 124 (221)
T ss_dssp HHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGG
T ss_pred HHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHH
Confidence 344578999999999999999999877557899999999999888877654 3 358888888755443
No 347
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.75 E-value=1.3e-09 Score=101.12 Aligned_cols=105 Identities=13% Similarity=0.050 Sum_probs=68.9
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc--ccccccccccccccc----ccchhhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST--NHIDLIANETIEIIP----HILDLCY 442 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~--~~v~~i~~d~~~~l~----~~~d~i~ 442 (511)
....+|.+|||||||+|+.+..+++.. + .+|++||+++++++.++++... .++.++.+++..... ..||.++
T Consensus 56 ~~~~~G~rVLdiG~G~G~~~~~~~~~~-~-~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~ 133 (236)
T 3orh_A 56 AASSKGGRVLEVGFGMAIAASKVQEAP-I-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp HHTTTCEEEEEECCTTSHHHHHHTTSC-E-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred hhccCCCeEEEECCCccHHHHHHHHhC-C-cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEE
Confidence 344689999999999999999998765 3 6899999999999999887663 346667776544332 2344332
Q ss_pred hcccCCcEEEEEcCC---ccHHHHHHHHHhCCCcEEEEh
Q psy7829 443 LNLHRGAKVLEIGSG---SGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 443 ~~l~~~~~vLD~~~g---~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+.-.... .-+. ...+...+++.|+|||.++-.
T Consensus 134 ~D~~~~~~---~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 134 YDTYPLSE---ETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp ECCCCCBG---GGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred Eeeeeccc---chhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 21110000 0111 122345678899999988754
No 348
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.74 E-value=5.5e-09 Score=95.04 Aligned_cols=99 Identities=11% Similarity=0.170 Sum_probs=70.5
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-ccccccccccccccccc--chhhhhc
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NHIDLIANETIEIIPHI--LDLCYLN 444 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~v~~i~~d~~~~l~~~--~d~i~~~ 444 (511)
..++.+|||||||+|+.++.+++.++++++|+++|+++++++.+++++. . ++++++.+|..+.++.. +|.++.+
T Consensus 54 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 133 (210)
T 3c3p_A 54 IKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFMD 133 (210)
T ss_dssp HHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEEE
T ss_pred hhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEEc
Confidence 3567899999999999999999887446899999999999888877654 2 35788888865543211 5554433
Q ss_pred ccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEE
Q psy7829 445 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTG 477 (511)
Q Consensus 445 l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~ 477 (511)
... ...-.+...+.+.|+|+|.++.
T Consensus 134 ~~~--------~~~~~~l~~~~~~LkpgG~lv~ 158 (210)
T 3c3p_A 134 CDV--------FNGADVLERMNRCLAKNALLIA 158 (210)
T ss_dssp TTT--------SCHHHHHHHHGGGEEEEEEEEE
T ss_pred CCh--------hhhHHHHHHHHHhcCCCeEEEE
Confidence 110 1223445666788899998876
No 349
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.74 E-value=1.1e-08 Score=104.48 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=74.9
Q ss_pred cCCC--CCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---cccccccccccccccccccchhhhh
Q psy7829 369 LNLH--RGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---STNHIDLIANETIEIIPHILDLCYL 443 (511)
Q Consensus 369 ~~~~--~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---~~~~v~~i~~d~~~~l~~~~d~i~~ 443 (511)
+.+. ++.+|||+|||+|..|+.+|+.+++.++|+++|+++++++.+++|+ +..|+.++++|....... .
T Consensus 111 L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~-~----- 184 (479)
T 2frx_A 111 LFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAA-V----- 184 (479)
T ss_dssp HTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHH-S-----
T ss_pred hCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhh-c-----
Confidence 4555 8999999999999999999999866689999999988888776665 466788888886543210 0
Q ss_pred cccCCcEEEEEcC-CccHH-------------------------HHHHHHHhCCCcEEEE
Q psy7829 444 NLHRGAKVLEIGS-GSGYL-------------------------ATLMAHLVGPTGHVTG 477 (511)
Q Consensus 444 ~l~~~~~vLD~~~-g~g~~-------------------------~~~l~~~l~~~g~v~~ 477 (511)
.-..+..++|..| |.|.+ ...+++.|+|||.++-
T Consensus 185 ~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~Lvy 244 (479)
T 2frx_A 185 PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVY 244 (479)
T ss_dssp TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 0112345667777 55542 3445678899999875
No 350
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.74 E-value=4.1e-08 Score=91.42 Aligned_cols=102 Identities=18% Similarity=0.185 Sum_probs=77.1
Q ss_pred cchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEE
Q psy7829 114 MNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRI 193 (511)
Q Consensus 114 ~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 193 (511)
+..+.+...+++.+. ..++.+|||+|||+|.++..+++.. ..+|+++|+++.+++.++++ . ..++++
T Consensus 14 l~d~~i~~~iv~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~--~-------~~~v~~ 80 (249)
T 3ftd_A 14 LVSEGVLKKIAEELN--IEEGNTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSI--G-------DERLEV 80 (249)
T ss_dssp EECHHHHHHHHHHTT--CCTTCEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTS--C-------CTTEEE
T ss_pred cCCHHHHHHHHHhcC--CCCcCEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhc--c-------CCCeEE
Confidence 445678888888876 6788999999999999999999862 46899999999999999877 2 237999
Q ss_pred EEccCCCCCCCC--CCccEEEecCCCCchHHHHHhhcc
Q psy7829 194 VEADAREGYLPE--APYDVIYYGGCVSEVPSRVLNQLK 229 (511)
Q Consensus 194 ~~~d~~~~~~~~--~~fD~I~~~~~~~~~~~~~~~~Lk 229 (511)
+++|+.....+. +.| .|+++.++.-...-+.++|.
T Consensus 81 i~~D~~~~~~~~~~~~~-~vv~NlPy~i~~~il~~ll~ 117 (249)
T 3ftd_A 81 INEDASKFPFCSLGKEL-KVVGNLPYNVASLIIENTVY 117 (249)
T ss_dssp ECSCTTTCCGGGSCSSE-EEEEECCTTTHHHHHHHHHH
T ss_pred EEcchhhCChhHccCCc-EEEEECchhccHHHHHHHHh
Confidence 999998643321 233 78888877644444445443
No 351
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.74 E-value=1.1e-08 Score=94.30 Aligned_cols=105 Identities=19% Similarity=0.197 Sum_probs=76.6
Q ss_pred CCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccccccccccccc
Q psy7829 355 SSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEII 434 (511)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~l 434 (511)
.+...+..++.. .+.++.+|||+|||+|.++..+++.. .+|+++|+++.+++.++++ .++++++.+|..+.+
T Consensus 33 ~~~~l~~~~~~~---~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~--~~~~~~~~~d~~~~~ 104 (226)
T 3m33_A 33 DPELTFDLWLSR---LLTPQTRVLEAGCGHGPDAARFGPQA---ARWAAYDFSPELLKLARAN--APHADVYEWNGKGEL 104 (226)
T ss_dssp CTTHHHHHHHHH---HCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHH--CTTSEEEECCSCSSC
T ss_pred CHHHHHHHHHHh---cCCCCCeEEEeCCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHh--CCCceEEEcchhhcc
Confidence 344555555443 24688999999999999999998773 7999999999999998888 557888888764433
Q ss_pred c----ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 435 P----HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 435 ~----~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
+ ..+|.++.. .....+...+.+.|+|+|.++..
T Consensus 105 ~~~~~~~fD~v~~~-----------~~~~~~l~~~~~~LkpgG~l~~~ 141 (226)
T 3m33_A 105 PAGLGAPFGLIVSR-----------RGPTSVILRLPELAAPDAHFLYV 141 (226)
T ss_dssp CTTCCCCEEEEEEE-----------SCCSGGGGGHHHHEEEEEEEEEE
T ss_pred CCcCCCCEEEEEeC-----------CCHHHHHHHHHHHcCCCcEEEEe
Confidence 2 345555443 23444556788889999998733
No 352
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.73 E-value=1.9e-08 Score=96.89 Aligned_cols=102 Identities=9% Similarity=0.042 Sum_probs=73.4
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-----ccccccccccccccc--c------c
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-----TNHIDLIANETIEII--P------H 436 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-----~~~v~~i~~d~~~~l--~------~ 436 (511)
...++.+|||||||+|..+..+++.+.+..+|+++|+++.+++.++++.. ..+++++.+|..+.. . .
T Consensus 33 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 33 HDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp CCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred hcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCC
Confidence 44689999999999999999999876456899999999999998887753 457888888754421 1 2
Q ss_pred cchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEE
Q psy7829 437 ILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTG 477 (511)
Q Consensus 437 ~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~ 477 (511)
.+|.++....-... ....+...+.+.|+|||.++.
T Consensus 113 ~fD~V~~~~~l~~~------~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 113 KIDMITAVECAHWF------DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CEEEEEEESCGGGS------CHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEeHhhHHHHh------CHHHHHHHHHHhcCCCcEEEE
Confidence 34444432211110 334567788889999999876
No 353
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.73 E-value=1.9e-08 Score=95.68 Aligned_cols=73 Identities=22% Similarity=0.277 Sum_probs=62.6
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-cccccccccccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-TNHIDLIANETIEI 433 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-~~~v~~i~~d~~~~ 433 (511)
.+..+.+++.. +.+.++++|||||||+|++|..+++.. .+|+++|++++++..+++++. .++++++++|..+.
T Consensus 35 d~~i~~~Iv~~--l~~~~~~~VLEIG~G~G~lT~~La~~~---~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~ 108 (295)
T 3gru_A 35 DKNFVNKAVES--ANLTKDDVVLEIGLGKGILTEELAKNA---KKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKV 108 (295)
T ss_dssp CHHHHHHHHHH--TTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTS
T ss_pred CHHHHHHHHHh--cCCCCcCEEEEECCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhC
Confidence 45778888887 788899999999999999999999874 899999999999998887764 56899999987653
No 354
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.73 E-value=1e-08 Score=94.64 Aligned_cols=101 Identities=19% Similarity=0.211 Sum_probs=71.8
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-ccccccccccccccc--------c
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NHIDLIANETIEIIP--------H 436 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~v~~i~~d~~~~l~--------~ 436 (511)
....++.+|||+|||+|+.++.+++.+++.++|+++|+++++++.+++++. . .+++++.+|..+.++ .
T Consensus 65 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~ 144 (229)
T 2avd_A 65 ARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAG 144 (229)
T ss_dssp HHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTT
T ss_pred HHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCC
Confidence 345678999999999999999999887446899999999988888877764 2 468888887655433 2
Q ss_pred cchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEE
Q psy7829 437 ILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTG 477 (511)
Q Consensus 437 ~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~ 477 (511)
.+|.++.+.. ......+...+.+.++|+|.++.
T Consensus 145 ~~D~v~~d~~--------~~~~~~~l~~~~~~L~pgG~lv~ 177 (229)
T 2avd_A 145 TFDVAVVDAD--------KENCSAYYERCLQLLRPGGILAV 177 (229)
T ss_dssp CEEEEEECSC--------STTHHHHHHHHHHHEEEEEEEEE
T ss_pred CccEEEECCC--------HHHHHHHHHHHHHHcCCCeEEEE
Confidence 2343333211 01122345667788999999887
No 355
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.73 E-value=1.6e-08 Score=92.57 Aligned_cols=111 Identities=15% Similarity=0.332 Sum_probs=78.8
Q ss_pred HHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cccccccccccccc--cc
Q psy7829 361 AHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETIEI--IP 435 (511)
Q Consensus 361 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~~~--l~ 435 (511)
..++.. +.+.++.+|||+|||+|.++..+++..+|..+|+++|+++++++.+++++. ..+++++.+|.... .+
T Consensus 27 ~~~~~~--~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 27 EKVLKE--FGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHH--HTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCS
T ss_pred HHHHHH--hCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCC
Confidence 455555 677889999999999999999999998777899999999998888777653 45688887775442 12
Q ss_pred ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 436 HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 436 ~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
..+|.++....-. .-.....+...+.+.|+|+|.++..
T Consensus 105 ~~fD~v~~~~~l~-----~~~~~~~~l~~~~~~LkpgG~l~i~ 142 (219)
T 3dh0_A 105 NTVDFIFMAFTFH-----ELSEPLKFLEELKRVAKPFAYLAII 142 (219)
T ss_dssp SCEEEEEEESCGG-----GCSSHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCeeEEEeehhhh-----hcCCHHHHHHHHHHHhCCCeEEEEE
Confidence 3344443321100 0012345667888899999998875
No 356
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.72 E-value=2.7e-08 Score=92.13 Aligned_cols=109 Identities=21% Similarity=0.363 Sum_probs=78.5
Q ss_pred CCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cccccccccccc
Q psy7829 355 SSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETI 431 (511)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~ 431 (511)
..+..+..++.. +.+.++.+|||+|||+|+++..+++..+ .+|+++|+++++++.+++++. ..+++++.+|..
T Consensus 75 ~~~~~~~~~~~~--l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~ 150 (235)
T 1jg1_A 75 SAPHMVAIMLEI--ANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGS 150 (235)
T ss_dssp CCHHHHHHHHHH--HTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG
T ss_pred ccHHHHHHHHHh--cCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcc
Confidence 466778888887 6788999999999999999999999884 899999999988888777654 456777777752
Q ss_pred ccccc--cchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 432 EIIPH--ILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 432 ~~l~~--~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
..++. .+|.++. .+....+...+.+.|+|+|.++..
T Consensus 151 ~~~~~~~~fD~Ii~-----------~~~~~~~~~~~~~~L~pgG~lvi~ 188 (235)
T 1jg1_A 151 KGFPPKAPYDVIIV-----------TAGAPKIPEPLIEQLKIGGKLIIP 188 (235)
T ss_dssp GCCGGGCCEEEEEE-----------CSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred cCCCCCCCccEEEE-----------CCcHHHHHHHHHHhcCCCcEEEEE
Confidence 22221 1333322 122223335677888999988765
No 357
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.72 E-value=7.8e-09 Score=95.63 Aligned_cols=100 Identities=19% Similarity=0.239 Sum_probs=70.1
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-ccccccccccccccc--------cc
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NHIDLIANETIEIIP--------HI 437 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~v~~i~~d~~~~l~--------~~ 437 (511)
...++.+|||||||+|+.++.+++.++++++|+++|+++++++.+++++. . ++++++.++..+.++ ..
T Consensus 69 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 69 SLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp HHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred HhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 44578899999999999999999887546899999999999888877653 3 358888887655433 22
Q ss_pred chhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEE
Q psy7829 438 LDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTG 477 (511)
Q Consensus 438 ~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~ 477 (511)
+|.++.+... ...-.+...+.+.|+|+|.++.
T Consensus 149 fD~V~~d~~~--------~~~~~~l~~~~~~LkpgG~lv~ 180 (232)
T 3cbg_A 149 FDLIFIDADK--------RNYPRYYEIGLNLLRRGGLMVI 180 (232)
T ss_dssp EEEEEECSCG--------GGHHHHHHHHHHTEEEEEEEEE
T ss_pred cCEEEECCCH--------HHHHHHHHHHHHHcCCCeEEEE
Confidence 3433322110 0112334566788899999886
No 358
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.72 E-value=9.8e-09 Score=96.88 Aligned_cols=116 Identities=24% Similarity=0.266 Sum_probs=80.1
Q ss_pred CCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc-ccccccccccccc
Q psy7829 355 SSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST-NHIDLIANETIEI 433 (511)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~-~~v~~i~~d~~~~ 433 (511)
.....+..++.. +.+.++.+|||+|||+|..+..+++..+ .+|+++|+++++++.++++... .+++++.+|..+.
T Consensus 39 ~~~~~~~~~~~~--~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~ 114 (266)
T 3ujc_A 39 GGLEATKKILSD--IELNENSKVLDIGSGLGGGCMYINEKYG--AHTHGIDICSNIVNMANERVSGNNKIIFEANDILTK 114 (266)
T ss_dssp THHHHHHHHTTT--CCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTC
T ss_pred chHHHHHHHHHh--cCCCCCCEEEEECCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccC
Confidence 345566666665 6788999999999999999999999864 7999999999999999888765 6788887775442
Q ss_pred --ccccchhhhhcccCCcEEEEEc-CCccHHHHHHHHHhCCCcEEEEh
Q psy7829 434 --IPHILDLCYLNLHRGAKVLEIG-SGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 434 --l~~~~d~i~~~l~~~~~vLD~~-~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+..+|.++....-.. ++ .....+...+.+.|+|+|.++..
T Consensus 115 ~~~~~~fD~v~~~~~l~~----~~~~~~~~~l~~~~~~L~pgG~l~~~ 158 (266)
T 3ujc_A 115 EFPENNFDLIYSRDAILA----LSLENKNKLFQKCYKWLKPTGTLLIT 158 (266)
T ss_dssp CCCTTCEEEEEEESCGGG----SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCcEEEEeHHHHHHh----cChHHHHHHHHHHHHHcCCCCEEEEE
Confidence 1233444332210000 00 11223356677888999988765
No 359
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.71 E-value=2e-08 Score=95.59 Aligned_cols=113 Identities=10% Similarity=0.001 Sum_probs=81.9
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc---c-cccccccccccccc-ccchhhhhcc
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST---N-HIDLIANETIEIIP-HILDLCYLNL 445 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~---~-~v~~i~~d~~~~l~-~~~d~i~~~l 445 (511)
++++.+|||+|||+|.+++.+|+.. + .+|+|+|+++++++.+++|... . +++++++|..+... ..+|.++.
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~-~-~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~-- 198 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-K-AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILM-- 198 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHT-C-CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEE--
T ss_pred CCCCCEEEEecccCCHHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEE--
Confidence 4679999999999999999999886 3 3899999999998888877653 3 37788888766543 34554443
Q ss_pred cCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh---------HHHHHHHHHHHHhcCC
Q psy7829 446 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL---------EHMMDIAIESIANIST 494 (511)
Q Consensus 446 ~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~---------~~ml~~a~~~~~~~~~ 494 (511)
|...+.-.+...+.+.|+|+|.++.. ...++..++.+.+.|.
T Consensus 199 -------~~p~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~ 249 (278)
T 2frn_A 199 -------GYVVRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGY 249 (278)
T ss_dssp -------CCCSSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTC
T ss_pred -------CCchhHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCC
Confidence 33344445667788899999988764 2344555666777665
No 360
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.70 E-value=3.4e-08 Score=102.29 Aligned_cols=122 Identities=16% Similarity=0.090 Sum_probs=89.2
Q ss_pred CcccchhHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCC--------------CceEEEEeCCHHHHHHHHH
Q psy7829 111 AGVMNAPNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGP--------------TGKVIGVEHIPELIEASLR 176 (511)
Q Consensus 111 ~~~~~~p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~--------------~~~v~~iD~~~~~~~~a~~ 176 (511)
|...+-+.+...|++.+. ..++ +|||.+||||.+...+++.+.. ...++|+|+++.++..|+.
T Consensus 225 G~fyTP~~Vv~lmv~ll~--p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~ 301 (544)
T 3khk_A 225 GQYYTPKSIVTLIVEMLE--PYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAM 301 (544)
T ss_dssp TTTCCCHHHHHHHHHHHC--CCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHH
T ss_pred CeEeCCHHHHHHHHHHHh--cCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHH
Confidence 444455557777777775 4444 9999999999998887654310 3579999999999999999
Q ss_pred HHhccCCCcCCCCCeEEEEccCCCCC-CCCCCccEEEecCCCCc-----------------------------------h
Q psy7829 177 NISKGNKDLLDSGRVRIVEADAREGY-LPEAPYDVIYYGGCVSE-----------------------------------V 220 (511)
Q Consensus 177 ~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~I~~~~~~~~-----------------------------------~ 220 (511)
|+...|. ..++.+.++|..... .....||+|++|+|+.. +
T Consensus 302 Nl~l~gi----~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~F 377 (544)
T 3khk_A 302 NMVIRGI----DFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAW 377 (544)
T ss_dssp HHHHTTC----CCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHH
T ss_pred HHHHhCC----CcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHH
Confidence 9887652 234555788866432 23478999999988742 2
Q ss_pred HHHHHhhcccCcEEEEEEc
Q psy7829 221 PSRVLNQLKKGGRILAPIG 239 (511)
Q Consensus 221 ~~~~~~~LkpgG~l~~~~~ 239 (511)
...+.+.|||||++.+.+.
T Consensus 378 l~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 378 MLHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp HHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHhccCceEEEEec
Confidence 3667899999999887654
No 361
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.70 E-value=3.3e-09 Score=97.56 Aligned_cols=107 Identities=10% Similarity=0.059 Sum_probs=65.3
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCC-HHHHHHH---Hhhc---cccccccccccccccccccchh--
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHM-MDIAIES---IANI---STNHIDLIANETIEIIPHILDL-- 440 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~-~~~~~~~---~~~~---~~~~v~~i~~d~~~~l~~~~d~-- 440 (511)
...++.+|||||||+|.++..+|+.. ++.+|+|+|++ +.+++.+ +++. +..|+.++++|........++.
T Consensus 21 ~~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~ 99 (225)
T 3p2e_A 21 IGQFDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIAD 99 (225)
T ss_dssp HTTCSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEE
T ss_pred hCCCCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEE
Confidence 34688999999999999999998765 66899999999 6665544 5543 3567888888765542111111
Q ss_pred -hhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEE
Q psy7829 441 -CYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTG 477 (511)
Q Consensus 441 -i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~ 477 (511)
+..+..-.............+...+++.|+|||.++.
T Consensus 100 ~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 100 SISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 1111100000000000112345667788899998876
No 362
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.70 E-value=2e-08 Score=95.22 Aligned_cols=99 Identities=13% Similarity=0.105 Sum_probs=75.4
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---ccccccccccccccccc--cchhhhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETIEIIPH--ILDLCYL 443 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~~~l~~--~~d~i~~ 443 (511)
..+.++++|||+|||+|.+++.+|+.. +.++|+++|+++++++.+++|+. ..++.++++|..+. +. .+|.++.
T Consensus 115 ~~~~~~~~VLDlgcG~G~~s~~la~~~-~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~~~~~D~Vi~ 192 (272)
T 3a27_A 115 FISNENEVVVDMFAGIGYFTIPLAKYS-KPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-ELKDVADRVIM 192 (272)
T ss_dssp TSCCTTCEEEETTCTTTTTHHHHHHHT-CCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CCTTCEEEEEE
T ss_pred HhcCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-CccCCceEEEE
Confidence 456789999999999999999999987 34799999999988888777765 45678888887665 32 3444443
Q ss_pred cccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 444 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 444 ~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
|...+...+...+.+.++|+|.++..
T Consensus 193 ---------d~p~~~~~~l~~~~~~LkpgG~l~~s 218 (272)
T 3a27_A 193 ---------GYVHKTHKFLDKTFEFLKDRGVIHYH 218 (272)
T ss_dssp ---------CCCSSGGGGHHHHHHHEEEEEEEEEE
T ss_pred ---------CCcccHHHHHHHHHHHcCCCCEEEEE
Confidence 33335566677778889999988755
No 363
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.70 E-value=3.4e-08 Score=97.81 Aligned_cols=102 Identities=25% Similarity=0.226 Sum_probs=76.5
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhcc--CCCcCCCCCeEEEEccCCCCCCC--CC
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKG--NKDLLDSGRVRIVEADAREGYLP--EA 206 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~~~~~~~~v~~~~~d~~~~~~~--~~ 206 (511)
+.+|.+|||+|||+|..+..+++.. .+|+++|+|+.+++.|++|++.+ | .++++++++|+.+.... .+
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~g---~~V~~VD~s~~~l~~Ar~N~~~~~~g-----l~~i~~i~~Da~~~L~~~~~~ 162 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSKA---SQGIYIERNDETAVAARHNIPLLLNE-----GKDVNILTGDFKEYLPLIKTF 162 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTTC---SEEEEEESCHHHHHHHHHHHHHHSCT-----TCEEEEEESCGGGSHHHHHHH
T ss_pred cCCCCEEEEeCCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHhHHHhccC-----CCcEEEEECcHHHhhhhccCC
Confidence 4468999999999999999998863 47999999999999999999875 4 36899999999764221 25
Q ss_pred CccEEEecCCCCch--------------HHHHHhhc-ccCcEEEEEEcc
Q psy7829 207 PYDVIYYGGCVSEV--------------PSRVLNQL-KKGGRILAPIGP 240 (511)
Q Consensus 207 ~fD~I~~~~~~~~~--------------~~~~~~~L-kpgG~l~~~~~~ 240 (511)
+||+|+++++...- ...+.+.| .....+++-+.+
T Consensus 163 ~fDvV~lDPPrr~~~~grv~~led~~P~l~~~~~~l~~~~~~~~vK~sP 211 (410)
T 3ll7_A 163 HPDYIYVDPARRSGADKRVYAIADCEPDLIPLATELLPFCSSILAKLSP 211 (410)
T ss_dssp CCSEEEECCEEC-----CCCCGGGEESCHHHHHHHHGGGSSEEEEEECT
T ss_pred CceEEEECCCCcCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEEEcCC
Confidence 79999999776321 13455544 445566665544
No 364
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.69 E-value=6.3e-08 Score=88.29 Aligned_cols=113 Identities=15% Similarity=0.161 Sum_probs=76.1
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----ccccccccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NHIDLIANETI 431 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~v~~i~~d~~ 431 (511)
.+.....++.. +..+++ +|||+|||+|.++..+++. ++.+|+++|+++++++.+++++.. ++++++.+|..
T Consensus 29 ~~~~~~~~~~~--~~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 103 (219)
T 3dlc_A 29 YPIIAENIINR--FGITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVH 103 (219)
T ss_dssp HHHHHHHHHHH--HCCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTT
T ss_pred cHHHHHHHHHh--cCCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHH
Confidence 34555566665 566666 9999999999999999987 347999999999998888777542 36778877754
Q ss_pred cc--ccccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 432 EI--IPHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 432 ~~--l~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
+. .+..+|.++....-.. -.....+...+.+.|+|+|.++..
T Consensus 104 ~~~~~~~~~D~v~~~~~l~~-----~~~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 104 NIPIEDNYADLIVSRGSVFF-----WEDVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp BCSSCTTCEEEEEEESCGGG-----CSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred HCCCCcccccEEEECchHhh-----ccCHHHHHHHHHHhCCCCCEEEEE
Confidence 42 1233444433211000 012345567788889999987763
No 365
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.69 E-value=4.1e-08 Score=87.61 Aligned_cols=112 Identities=13% Similarity=0.112 Sum_probs=76.2
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---ccc--cccccccccc
Q psy7829 358 RSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNH--IDLIANETIE 432 (511)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~--v~~i~~d~~~ 432 (511)
.....++.. +...++.+|||+|||+|.++..+++. + .+|+++|+++++++.++++.. ..+ ++++.+|..+
T Consensus 39 ~~~~~l~~~--~~~~~~~~vLdiG~G~G~~~~~~~~~-~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~ 113 (194)
T 1dus_A 39 KGTKILVEN--VVVDKDDDILDLGCGYGVIGIALADE-V--KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE 113 (194)
T ss_dssp HHHHHHHHH--CCCCTTCEEEEETCTTSHHHHHHGGG-S--SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT
T ss_pred hHHHHHHHH--cccCCCCeEEEeCCCCCHHHHHHHHc-C--CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc
Confidence 455666776 67778999999999999999999877 3 899999999998888777664 444 7788777654
Q ss_pred ccc-ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 433 IIP-HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 433 ~l~-~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
..+ ..+|.++.+..-... ......+...+.+.++|+|.++..
T Consensus 114 ~~~~~~~D~v~~~~~~~~~----~~~~~~~l~~~~~~L~~gG~l~~~ 156 (194)
T 1dus_A 114 NVKDRKYNKIITNPPIRAG----KEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp TCTTSCEEEEEECCCSTTC----HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCCceEEEECCCcccc----hhHHHHHHHHHHHHcCCCCEEEEE
Confidence 332 234444332211000 000123455667889999998876
No 366
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.69 E-value=1.3e-08 Score=95.87 Aligned_cols=110 Identities=14% Similarity=0.240 Sum_probs=76.2
Q ss_pred HHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cccccccccccccc--
Q psy7829 359 SIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETIEI-- 433 (511)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~~~-- 433 (511)
....++.. +...++.+|||+|||+|.++..+++.. .+|+++|+++++++.++++.. .++++++.+|....
T Consensus 25 ~~~~l~~~--l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~ 99 (260)
T 1vl5_A 25 DLAKLMQI--AALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPF 99 (260)
T ss_dssp CHHHHHHH--HTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCS
T ss_pred HHHHHHHH--hCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCC
Confidence 34555665 677789999999999999999998775 599999999999988777653 45688887775442
Q ss_pred ccccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 434 IPHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 434 l~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+..+|.++....-. .-.....+...+.+.|+|+|.++..
T Consensus 100 ~~~~fD~V~~~~~l~-----~~~d~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 100 TDERFHIVTCRIAAH-----HFPNPASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp CTTCEEEEEEESCGG-----GCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCEEEEEEhhhhH-----hcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 123455544331110 0012335567788889999988764
No 367
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.68 E-value=8.6e-09 Score=90.28 Aligned_cols=99 Identities=9% Similarity=0.135 Sum_probs=73.4
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccccccccccccccccchhhhhcccCC
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEIIPHILDLCYLNLHRG 448 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~l~~~~d~i~~~l~~~ 448 (511)
+.+.++.+|||+|||+|.++..+++.. .+|+++|+++++++.++++ .++++++.+| ....+..+|.++....-.
T Consensus 13 ~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~--~~~v~~~~~d-~~~~~~~~D~v~~~~~l~ 86 (170)
T 3i9f_A 13 IFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK--FDSVITLSDP-KEIPDNSVDFILFANSFH 86 (170)
T ss_dssp HHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH--CTTSEEESSG-GGSCTTCEEEEEEESCST
T ss_pred cCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh--CCCcEEEeCC-CCCCCCceEEEEEccchh
Confidence 466789999999999999999999876 5999999999999988887 5678888887 443344556554332111
Q ss_pred cEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 449 AKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 449 ~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
. ......+...+.+.++|+|.++..
T Consensus 87 ~-----~~~~~~~l~~~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 87 D-----MDDKQHVISEVKRILKDDGRVIII 111 (170)
T ss_dssp T-----CSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred c-----ccCHHHHHHHHHHhcCCCCEEEEE
Confidence 0 013345667888899999998776
No 368
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.68 E-value=3.6e-08 Score=91.61 Aligned_cols=113 Identities=12% Similarity=0.157 Sum_probs=78.1
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---cccccccccccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---STNHIDLIANETIE 432 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---~~~~v~~i~~d~~~ 432 (511)
++.....++.. +.+.++.+|||+|||+|.++..+++.. .+|+++|+++.+++.++++. +..+++++.+|...
T Consensus 6 ~~~~~~~~~~~--~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 80 (239)
T 1xxl_A 6 HHHSLGLMIKT--AECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAES 80 (239)
T ss_dssp CHHHHHHHHHH--HTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTB
T ss_pred cCCCcchHHHH--hCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccccc
Confidence 44555566666 788999999999999999999998765 69999999999888877665 34578888777543
Q ss_pred c--ccccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 433 I--IPHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 433 ~--l~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
. .+..+|.++....-.. -.....+...+.+.|+|+|.++..
T Consensus 81 ~~~~~~~fD~v~~~~~l~~-----~~~~~~~l~~~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 81 LPFPDDSFDIITCRYAAHH-----FSDVRKAVREVARVLKQDGRFLLV 123 (239)
T ss_dssp CCSCTTCEEEEEEESCGGG-----CSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCCcEEEEEECCchhh-----ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 2 1233454443211000 012345567778888999988764
No 369
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.68 E-value=9.7e-09 Score=90.60 Aligned_cols=114 Identities=20% Similarity=0.184 Sum_probs=71.4
Q ss_pred CCHHHHHHHHHHhhcC-CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----ccccccccc
Q psy7829 355 SSERSIAHILDLCYLN-LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NHIDLIANE 429 (511)
Q Consensus 355 ~~~~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~v~~i~~d 429 (511)
.+......++.. +. ..++.+|||+|||+|.+++.+++.. ..+|+++|+++++++.+++++.. ++++++.+|
T Consensus 14 ~~~~~~~~~~~~--l~~~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d 89 (177)
T 2esr_A 14 TSDKVRGAIFNM--IGPYFNGGRVLDLFAGSGGLAIEAVSRG--MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKME 89 (177)
T ss_dssp ----CHHHHHHH--HCSCCCSCEEEEETCTTCHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSC
T ss_pred CHHHHHHHHHHH--HHhhcCCCeEEEeCCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECc
Confidence 344445555554 33 6688999999999999999998762 37999999999999988877653 357788887
Q ss_pred cccccc---ccchhhhhcccCCcEEEEEcCCccHHHHHHH--HHhCCCcEEEEh
Q psy7829 430 TIEIIP---HILDLCYLNLHRGAKVLEIGSGSGYLATLMA--HLVGPTGHVTGL 478 (511)
Q Consensus 430 ~~~~l~---~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~--~~l~~~g~v~~~ 478 (511)
..+.++ ..+|.++.+..-.. .........+. +.|+|+|.++..
T Consensus 90 ~~~~~~~~~~~fD~i~~~~~~~~------~~~~~~~~~l~~~~~L~~gG~l~~~ 137 (177)
T 2esr_A 90 AERAIDCLTGRFDLVFLDPPYAK------ETIVATIEALAAKNLLSEQVMVVCE 137 (177)
T ss_dssp HHHHHHHBCSCEEEEEECCSSHH------HHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HHHhHHhhcCCCCEEEECCCCCc------chHHHHHHHHHhCCCcCCCcEEEEE
Confidence 655332 23444333211000 00011223343 567898888765
No 370
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.68 E-value=2.2e-08 Score=93.40 Aligned_cols=101 Identities=11% Similarity=0.089 Sum_probs=71.6
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccccccccccccccc-------cchhhh
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEIIPH-------ILDLCY 442 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~l~~-------~~d~i~ 442 (511)
.+.++.+|||+|||+|.++..+++.. .+|+++|+++.+++.++++....+++++++|..+.... .+|.++
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~ 129 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFF---PRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIY 129 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHS---SCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEE
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhC---CCEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEE
Confidence 46788999999999999999999876 48999999999999999988777889888876543211 122222
Q ss_pred hcccCCcEEEEEcC--CccHHHHHHHHHhCCCcEEEEh
Q psy7829 443 LNLHRGAKVLEIGS--GSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 443 ~~l~~~~~vLD~~~--g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
....-.. .. ..-.+...+.+.|+|+|.++.+
T Consensus 130 ~~~~~~~-----~~~~~~~~~l~~~~~~LkpgG~l~i~ 162 (245)
T 3ggd_A 130 MRTGFHH-----IPVEKRELLGQSLRILLGKQGAMYLI 162 (245)
T ss_dssp EESSSTT-----SCGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred Ecchhhc-----CCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 2110000 00 1124566788889999987665
No 371
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.68 E-value=4.4e-08 Score=93.66 Aligned_cols=102 Identities=17% Similarity=0.130 Sum_probs=72.5
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc----ccccccccccccccccccchhhhhc
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS----TNHIDLIANETIEIIPHILDLCYLN 444 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~----~~~v~~i~~d~~~~l~~~~d~i~~~ 444 (511)
+.+.++.+|||||||+|.++..+++..+ .+|+++|+++++++.+++++. ..+++++.+|..+ ++..+|.++..
T Consensus 60 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~fD~v~~~ 136 (287)
T 1kpg_A 60 LGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ-FDEPVDRIVSI 136 (287)
T ss_dssp TTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG-CCCCCSEEEEE
T ss_pred cCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh-CCCCeeEEEEe
Confidence 6678899999999999999999997775 699999999999988877654 2467777777643 23445544322
Q ss_pred ccCCcEEEE-Ec-CCccHHHHHHHHHhCCCcEEEEh
Q psy7829 445 LHRGAKVLE-IG-SGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 445 l~~~~~vLD-~~-~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
. ++. ++ .....+...+.+.|+|+|.++..
T Consensus 137 ~-----~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 167 (287)
T 1kpg_A 137 G-----AFEHFGHERYDAFFSLAHRLLPADGVMLLH 167 (287)
T ss_dssp S-----CGGGTCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred C-----chhhcChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 1 000 01 12345567788899999998764
No 372
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.68 E-value=1.2e-08 Score=95.60 Aligned_cols=95 Identities=11% Similarity=0.122 Sum_probs=68.2
Q ss_pred CCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccccccccccccccc--ccccchhhhhcccCCc
Q psy7829 372 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEI--IPHILDLCYLNLHRGA 449 (511)
Q Consensus 372 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~--l~~~~d~i~~~l~~~~ 449 (511)
..+.+|||||||+|..+..++... .+|+|+|++++|++.+++ .++++++.++..+. -+..+|.+.....-.+
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~---~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~ 111 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALR---HPRVTYAVAPAEDTGLPPASVDVAIAAQAMHW 111 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCC---CTTEEEEECCTTCCCCCSSCEEEEEECSCCTT
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhh---cCCceeehhhhhhhcccCCcccEEEEeeehhH
Confidence 456799999999999999999765 799999999999987654 35788887765432 2345565544322111
Q ss_pred EEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 450 KVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 450 ~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
+ ....+..++.+.|+|||.+..+
T Consensus 112 --~----~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 112 --F----DLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp --C----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred --h----hHHHHHHHHHHHcCCCCEEEEE
Confidence 1 2345667888999999998665
No 373
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.68 E-value=2.5e-08 Score=88.66 Aligned_cols=116 Identities=16% Similarity=0.151 Sum_probs=76.5
Q ss_pred CCCCHHHHHHHHHHhhc-CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----ccccccc
Q psy7829 353 GPSSERSIAHILDLCYL-NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NHIDLIA 427 (511)
Q Consensus 353 ~~~~~~~~~~~~~~~~~-~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~v~~i~ 427 (511)
.|.+......++.. + ...++.+|||+|||+|.+++.+++.. ..+|+++|+++++++.+++++.. ++++++.
T Consensus 25 rp~~~~~~~~~~~~--l~~~~~~~~vLD~GcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~ 100 (187)
T 2fhp_A 25 RPTTDKVKESIFNM--IGPYFDGGMALDLYSGSGGLAIEAVSRG--MDKSICIEKNFAALKVIKENIAITKEPEKFEVRK 100 (187)
T ss_dssp CCCCHHHHHHHHHH--HCSCCSSCEEEETTCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE
T ss_pred CcCHHHHHHHHHHH--HHhhcCCCCEEEeCCccCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEE
Confidence 46677777777665 3 34678999999999999999888742 37999999999998888777652 4688888
Q ss_pred ccccccc------cccchhhhhcccCCcEEEEEcCCccHHHHHH--HHHhCCCcEEEEh
Q psy7829 428 NETIEII------PHILDLCYLNLHRGAKVLEIGSGSGYLATLM--AHLVGPTGHVTGL 478 (511)
Q Consensus 428 ~d~~~~l------~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l--~~~l~~~g~v~~~ 478 (511)
+|..+.. +..+|.++.+..-.. .........+ .+.|+|+|.++..
T Consensus 101 ~d~~~~~~~~~~~~~~fD~i~~~~~~~~------~~~~~~~~~l~~~~~L~~gG~l~~~ 153 (187)
T 2fhp_A 101 MDANRALEQFYEEKLQFDLVLLDPPYAK------QEIVSQLEKMLERQLLTNEAVIVCE 153 (187)
T ss_dssp SCHHHHHHHHHHTTCCEEEEEECCCGGG------CCHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CcHHHHHHHHHhcCCCCCEEEECCCCCc------hhHHHHHHHHHHhcccCCCCEEEEE
Confidence 8865543 233454443322000 0011222333 4557899988765
No 374
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.67 E-value=2.7e-08 Score=93.56 Aligned_cols=72 Identities=21% Similarity=0.299 Sum_probs=62.4
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccccccccccccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEI 433 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~ 433 (511)
.+..+.+++.. +.+.++ +|||||||+|.+|..+++.. .+|+++|++++++..+++++...+++++++|..+.
T Consensus 32 d~~i~~~Iv~~--~~~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~ 103 (271)
T 3fut_A 32 SEAHLRRIVEA--ARPFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLY 103 (271)
T ss_dssp CHHHHHHHHHH--HCCCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGS
T ss_pred CHHHHHHHHHh--cCCCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhC
Confidence 34677788887 778888 99999999999999999875 79999999999999998888777899999987664
No 375
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.67 E-value=6e-09 Score=95.38 Aligned_cols=98 Identities=17% Similarity=0.135 Sum_probs=66.8
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHH----HHhh---ccccccccccccccccccccchhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIE----SIAN---ISTNHIDLIANETIEIIPHILDLC 441 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~----~~~~---~~~~~v~~i~~d~~~~l~~~~d~i 441 (511)
+.+.++.+|||+|||+|.++..+++.. |..+|+++|+++++++. ++++ .+.++++++++|... ++...
T Consensus 23 l~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~-l~~~~--- 97 (218)
T 3mq2_A 23 LRSQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER-LPPLS--- 97 (218)
T ss_dssp HHTTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT-CCSCC---
T ss_pred hhccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh-CCCCC---
Confidence 556789999999999999999999986 66999999999885554 3332 335578888877654 22100
Q ss_pred hhcccCCcEEEEEcC-----------CccHHHHHHHHHhCCCcEEEE
Q psy7829 442 YLNLHRGAKVLEIGS-----------GSGYLATLMAHLVGPTGHVTG 477 (511)
Q Consensus 442 ~~~l~~~~~vLD~~~-----------g~g~~~~~l~~~l~~~g~v~~ 477 (511)
.. ..+++.. ..-.+...+.+.|+|+|.++.
T Consensus 98 ----~~--d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 138 (218)
T 3mq2_A 98 ----GV--GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLV 138 (218)
T ss_dssp ----CE--EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEE
T ss_pred ----CC--CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEE
Confidence 00 1111211 113455677888999999875
No 376
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.67 E-value=2.4e-07 Score=95.79 Aligned_cols=126 Identities=13% Similarity=-0.004 Sum_probs=93.6
Q ss_pred CcccchhHHHHHHHHHHhhc--CCCCCEEEEEcCCccHHHHHHHHHhC--CCceEEEEeCCHHHHHHHHHHHhccCCCcC
Q psy7829 111 AGVMNAPNQIADAAENLKLH--LVDGAKVLDLGSGSGYQTCVFAHMVG--PTGKVIGVEHIPELIEASLRNISKGNKDLL 186 (511)
Q Consensus 111 ~~~~~~p~~~~~~~~~l~~~--~~~~~~vLDiG~G~G~~~~~la~~~~--~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~ 186 (511)
|...+-+.+...|++.+... ..++.+|||.+||||.+...+++.+. ...+++|+|+++.++..|+.|+...|.
T Consensus 197 G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi--- 273 (542)
T 3lkd_A 197 GEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGV--- 273 (542)
T ss_dssp SSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTC---
T ss_pred CeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCC---
Confidence 33334445666777777522 23678999999999999988888752 256899999999999999999877651
Q ss_pred CCCCeEEEEccCCCC--C-CCCCCccEEEecCCCCc-----------------------------hHHHHHhhcc-cCcE
Q psy7829 187 DSGRVRIVEADAREG--Y-LPEAPYDVIYYGGCVSE-----------------------------VPSRVLNQLK-KGGR 233 (511)
Q Consensus 187 ~~~~v~~~~~d~~~~--~-~~~~~fD~I~~~~~~~~-----------------------------~~~~~~~~Lk-pgG~ 233 (511)
..+++.+.++|.... + .....||+|++|+|+.. +...+.+.|| |||+
T Consensus 274 ~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr 353 (542)
T 3lkd_A 274 PIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGV 353 (542)
T ss_dssp CGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCE
T ss_pred CcCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCcee
Confidence 225789999998753 1 23478999999988610 2366788999 9999
Q ss_pred EEEEEc
Q psy7829 234 ILAPIG 239 (511)
Q Consensus 234 l~~~~~ 239 (511)
+.+.+.
T Consensus 354 ~a~VlP 359 (542)
T 3lkd_A 354 MAIVLP 359 (542)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 987654
No 377
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.67 E-value=3.3e-08 Score=95.78 Aligned_cols=102 Identities=12% Similarity=0.077 Sum_probs=73.8
Q ss_pred cC-CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----ccccccccccccc--ccccchhh
Q psy7829 369 LN-LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NHIDLIANETIEI--IPHILDLC 441 (511)
Q Consensus 369 ~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~v~~i~~d~~~~--l~~~~d~i 441 (511)
+. +.++.+|||+|||+|.++..+++..+ .+|+++|+++++++.++++... .+++++.+|..+. .+..+|.+
T Consensus 112 l~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V 189 (312)
T 3vc1_A 112 LGQAGPDDTLVDAGCGRGGSMVMAHRRFG--SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTAS 189 (312)
T ss_dssp SCCCCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEE
T ss_pred hccCCCCCEEEEecCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEE
Confidence 45 77899999999999999999998864 7999999999999888776542 3688888876543 12345554
Q ss_pred hhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 442 YLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 442 ~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
+.... +. ..+...+...+.+.|+|+|.++.+
T Consensus 190 ~~~~~-----l~-~~~~~~~l~~~~~~LkpgG~l~~~ 220 (312)
T 3vc1_A 190 WNNES-----TM-YVDLHDLFSEHSRFLKVGGRYVTI 220 (312)
T ss_dssp EEESC-----GG-GSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCc-----hh-hCCHHHHHHHHHHHcCCCcEEEEE
Confidence 43211 00 012456677888899999998765
No 378
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.67 E-value=3.3e-08 Score=92.38 Aligned_cols=58 Identities=16% Similarity=0.153 Sum_probs=50.0
Q ss_pred HHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccc
Q psy7829 359 SIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTN 421 (511)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~ 421 (511)
.+..++.. +.+.++.+|||||||+|.+++.+++.. .+|+++|+++++++.++++....
T Consensus 33 ~~~~il~~--l~l~~g~~VLDlGcGtG~~a~~La~~g---~~V~gvD~S~~ml~~Ar~~~~~~ 90 (261)
T 3iv6_A 33 DRENDIFL--ENIVPGSTVAVIGASTRFLIEKALERG---ASVTVFDFSQRMCDDLAEALADR 90 (261)
T ss_dssp HHHHHHHT--TTCCTTCEEEEECTTCHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTSSS
T ss_pred HHHHHHHh--cCCCCcCEEEEEeCcchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHhc
Confidence 34566665 788899999999999999999999864 79999999999999999887654
No 379
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.67 E-value=4.9e-08 Score=99.37 Aligned_cols=105 Identities=16% Similarity=0.168 Sum_probs=75.9
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---cccccccccccccccccccchhhhhcc
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---STNHIDLIANETIEIIPHILDLCYLNL 445 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---~~~~v~~i~~d~~~~l~~~~d~i~~~l 445 (511)
+.+.++.+|||+|||+|..+..+++.++..++|+++|+++.+++.+.+|+ +..+++++++|.....+. + ..-
T Consensus 255 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~-~----~~~ 329 (450)
T 2yxl_A 255 LDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI-I----GEE 329 (450)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS-S----CSS
T ss_pred cCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh-h----ccC
Confidence 67789999999999999999999998854489999999988887766654 566788888876543211 0 001
Q ss_pred cCCcEEEEEcC-CccH-------------------------HHHHHHHHhCCCcEEEEh
Q psy7829 446 HRGAKVLEIGS-GSGY-------------------------LATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 446 ~~~~~vLD~~~-g~g~-------------------------~~~~l~~~l~~~g~v~~~ 478 (511)
..+..++|..| |.|. +...+.+.++|||.++-.
T Consensus 330 ~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~ 388 (450)
T 2yxl_A 330 VADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYT 388 (450)
T ss_dssp CEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 12345667777 6664 344566778999998743
No 380
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.66 E-value=3.4e-08 Score=96.12 Aligned_cols=134 Identities=13% Similarity=0.105 Sum_probs=84.1
Q ss_pred CHHHHHHHHHHhhcC-CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cc--cccccccc
Q psy7829 356 SERSIAHILDLCYLN-LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TN--HIDLIANE 429 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~--~v~~i~~d 429 (511)
+......+... +. ..++.+|||+|||+|.+++.+++.. .+|+++|+++.+++.+++|+. .. +++++++|
T Consensus 137 q~~~~~~l~~~--~~~~~~~~~VLDlgcGtG~~sl~la~~g---a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D 211 (332)
T 2igt_A 137 QIVHWEWLKNA--VETADRPLKVLNLFGYTGVASLVAAAAG---AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICED 211 (332)
T ss_dssp GHHHHHHHHHH--HHHSSSCCEEEEETCTTCHHHHHHHHTT---CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSC
T ss_pred HHHHHHHHHHH--HHhcCCCCcEEEcccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECc
Confidence 33444344444 22 4568899999999999999999753 599999999999888887765 33 37888888
Q ss_pred cccccc------ccchhhhhcccCC-----cEEEEEcCCccHHHHHHHHHhCCCcEEEEh---------HHHHHHHHHHH
Q psy7829 430 TIEIIP------HILDLCYLNLHRG-----AKVLEIGSGSGYLATLMAHLVGPTGHVTGL---------EHMMDIAIESI 489 (511)
Q Consensus 430 ~~~~l~------~~~d~i~~~l~~~-----~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~---------~~ml~~a~~~~ 489 (511)
..+.++ ..+|.++.+.+.- ..+.+..-..-.+...+.+.|+|+|.++.. ..+.+..++.+
T Consensus 212 ~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~ 291 (332)
T 2igt_A 212 AMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETM 291 (332)
T ss_dssp HHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHH
Confidence 766543 2466665543210 111111111223445566788999985543 34444555555
Q ss_pred HhcCC
Q psy7829 490 ANIST 494 (511)
Q Consensus 490 ~~~~~ 494 (511)
.+.|.
T Consensus 292 ~~~g~ 296 (332)
T 2igt_A 292 RGAGG 296 (332)
T ss_dssp TTSCS
T ss_pred HHcCC
Confidence 55554
No 381
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.66 E-value=9.1e-08 Score=92.10 Aligned_cols=129 Identities=10% Similarity=0.100 Sum_probs=86.5
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-------ccccccccccccccc----ccc
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-------TNHIDLIANETIEII----PHI 437 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-------~~~v~~i~~d~~~~l----~~~ 437 (511)
...+++.+|||||||+|..+..+++.. +..+|+++|+++++++.+++++. .++++++.+|..+.+ +..
T Consensus 91 ~~~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 169 (304)
T 3bwc_A 91 CSHPKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNT 169 (304)
T ss_dssp TTSSSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTC
T ss_pred hcCCCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCc
Confidence 344678899999999999999998764 45799999999999998887762 456888888876553 345
Q ss_pred chhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh-------HHHHHHHHHHHHhcCCCceEE
Q psy7829 438 LDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL-------EHMMDIAIESIANISTNHIDL 499 (511)
Q Consensus 438 ~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~-------~~ml~~a~~~~~~~~~~~i~~ 499 (511)
+|.++.+...... .+...-+-.+...+.+.|+|+|.++.. ....+...+.+++.|+..+..
T Consensus 170 fDvIi~d~~~~~~-~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~ 237 (304)
T 3bwc_A 170 YDVVIIDTTDPAG-PASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQY 237 (304)
T ss_dssp EEEEEEECC----------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEE
T ss_pred eeEEEECCCCccc-cchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEE
Confidence 6766654322110 000001235566788899999998874 244555666666666644443
No 382
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.66 E-value=5.6e-09 Score=97.83 Aligned_cols=82 Identities=22% Similarity=0.264 Sum_probs=64.3
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCH-------HHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCC
Q psy7829 131 LVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIP-------ELIEASLRNISKGNKDLLDSGRVRIVEADAREGYL 203 (511)
Q Consensus 131 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~-------~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 203 (511)
..++.+|||+|||+|..++.+++.. ++|+++|+++ .+++.|+++++.++ ...+++++++|+.+...
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~g---~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~----~~~ri~~~~~d~~~~l~ 153 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASLG---LTVTAFEQHPAVACLLSDGIRRALLNPETQD----TAARINLHFGNAAEQMP 153 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHTT---CCEEEEECCHHHHHHHHHHHHHHHHSHHHHH----HHTTEEEEESCHHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHhC---CEEEEEECChhhhHHHHHHHHHHHhHHHhhC----CccCeEEEECCHHHHHH
Confidence 4567899999999999999999863 4799999999 99999998877653 12359999999875321
Q ss_pred --CC--CCccEEEecCCCCc
Q psy7829 204 --PE--APYDVIYYGGCVSE 219 (511)
Q Consensus 204 --~~--~~fD~I~~~~~~~~ 219 (511)
.. ++||+|++++++++
T Consensus 154 ~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 154 ALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHCCCSEEEECCCC--
T ss_pred hhhccCCCccEEEECCCCCC
Confidence 12 57999999987753
No 383
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.65 E-value=8.5e-08 Score=93.12 Aligned_cols=109 Identities=17% Similarity=0.163 Sum_probs=75.2
Q ss_pred HHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----ccccccccccccccc
Q psy7829 360 IAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NHIDLIANETIEIIP 435 (511)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~v~~i~~d~~~~l~ 435 (511)
+..++.. +.+.++.+|||||||+|.++..+++..+ .+|+++|+++++++.++++... ++++++.+|..+. +
T Consensus 79 ~~~~~~~--~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~ 153 (318)
T 2fk8_A 79 VDLNLDK--LDLKPGMTLLDIGCGWGTTMRRAVERFD--VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF-A 153 (318)
T ss_dssp HHHHHTT--SCCCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC-C
T ss_pred HHHHHHh--cCCCCcCEEEEEcccchHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC-C
Confidence 3444444 6778899999999999999999998874 7999999999999988877542 3477777775442 3
Q ss_pred ccchhhhhcccCCcEEEE-Ec-CCccHHHHHHHHHhCCCcEEEEh
Q psy7829 436 HILDLCYLNLHRGAKVLE-IG-SGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 436 ~~~d~i~~~l~~~~~vLD-~~-~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
..+|.++.... +. ++ .....+...+.+.|+|+|.++..
T Consensus 154 ~~fD~v~~~~~-----l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 193 (318)
T 2fk8_A 154 EPVDRIVSIEA-----FEHFGHENYDDFFKRCFNIMPADGRMTVQ 193 (318)
T ss_dssp CCCSEEEEESC-----GGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCcCEEEEeCh-----HHhcCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 44444432210 00 00 11234556778889999998765
No 384
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.65 E-value=2.2e-08 Score=99.92 Aligned_cols=103 Identities=17% Similarity=0.231 Sum_probs=75.8
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-----------cccccccccccccc------
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-----------TNHIDLIANETIEI------ 433 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-----------~~~v~~i~~d~~~~------ 433 (511)
+.++.+|||+|||+|..+..+++..+++++|+++|+++++++.+++++. ..+++++.+|..+.
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 5688999999999999999999998777899999999999998887753 26788888876542
Q ss_pred --ccccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 434 --IPHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 434 --l~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+..+|.++.+..-. .......+...+.+.|+|+|.++..
T Consensus 161 ~~~~~~fD~V~~~~~l~-----~~~d~~~~l~~~~r~LkpgG~l~i~ 202 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCN-----LSTNKLALFKEIHRVLRDGGELYFS 202 (383)
T ss_dssp CCCTTCEEEEEEESCGG-----GCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchh-----cCCCHHHHHHHHHHHcCCCCEEEEE
Confidence 123455554432111 1112345667888999999998764
No 385
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.65 E-value=3.1e-08 Score=90.61 Aligned_cols=106 Identities=14% Similarity=0.170 Sum_probs=73.9
Q ss_pred HHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccccccccccccccccc-ccchh
Q psy7829 362 HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEIIP-HILDL 440 (511)
Q Consensus 362 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~l~-~~~d~ 440 (511)
.++.. +...++.+|||+|||+|.++..+++.. .+|+++|+++++++.++++.. .+++++.+|..+... ..+|.
T Consensus 36 ~~l~~--~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~d~~~~~~~~~fD~ 109 (220)
T 3hnr_A 36 DILED--VVNKSFGNVLEFGVGTGNLTNKLLLAG---RTVYGIEPSREMRMIAKEKLP-KEFSITEGDFLSFEVPTSIDT 109 (220)
T ss_dssp HHHHH--HHHTCCSEEEEECCTTSHHHHHHHHTT---CEEEEECSCHHHHHHHHHHSC-TTCCEESCCSSSCCCCSCCSE
T ss_pred HHHHH--hhccCCCeEEEeCCCCCHHHHHHHhCC---CeEEEEeCCHHHHHHHHHhCC-CceEEEeCChhhcCCCCCeEE
Confidence 44444 444688999999999999999998763 799999999999999988877 678888887654321 34444
Q ss_pred hhhcccCCcEEEEEcCCccH--HHHHHHHHhCCCcEEEEh
Q psy7829 441 CYLNLHRGAKVLEIGSGSGY--LATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 441 i~~~l~~~~~vLD~~~g~g~--~~~~l~~~l~~~g~v~~~ 478 (511)
++... ++..-..... +...+.+.|+|+|.++..
T Consensus 110 v~~~~-----~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 110 IVSTY-----AFHHLTDDEKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp EEEES-----CGGGSCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred EEECc-----chhcCChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 43321 0000011111 557788889999998765
No 386
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.65 E-value=1.4e-08 Score=92.65 Aligned_cols=102 Identities=19% Similarity=0.192 Sum_probs=71.4
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc-cccccccccccccc-cccchhhhhccc
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST-NHIDLIANETIEII-PHILDLCYLNLH 446 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~-~~v~~i~~d~~~~l-~~~~d~i~~~l~ 446 (511)
+...++.+|||+|||+|.++..+++.. .+|+++|+++++++.++++... .+++++.+|..+.. +..+|.++....
T Consensus 47 ~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~ 123 (216)
T 3ofk_A 47 LSSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEV 123 (216)
T ss_dssp TTTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESC
T ss_pred cccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccH
Confidence 566678899999999999999998775 7999999999999998888763 47888888765443 233444433210
Q ss_pred CCcEEEEEcCCcc---HHHHHHHHHhCCCcEEEEh
Q psy7829 447 RGAKVLEIGSGSG---YLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 447 ~~~~vLD~~~g~g---~~~~~l~~~l~~~g~v~~~ 478 (511)
+..-.... .+...+.+.|+|+|.++..
T Consensus 124 -----l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 124 -----LYYLEDMTQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp -----GGGSSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred -----HHhCCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 00001121 2356777889999998863
No 387
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.65 E-value=6.1e-08 Score=90.77 Aligned_cols=103 Identities=14% Similarity=0.118 Sum_probs=74.9
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccccccccccccc--cccchhhhhccc
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEII--PHILDLCYLNLH 446 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~l--~~~~d~i~~~l~ 446 (511)
+...++.+|||+|||+|..+..+++.. + .+|+++|+++++++.++++....+++++.+|..... +..+|.++....
T Consensus 40 ~~~~~~~~vLD~GcG~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 117 (253)
T 3g5l_A 40 LPDFNQKTVLDLGCGFGWHCIYAAEHG-A-KKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLA 117 (253)
T ss_dssp CCCCTTCEEEEETCTTCHHHHHHHHTT-C-SEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESC
T ss_pred hhccCCCEEEEECCCCCHHHHHHHHcC-C-CEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchh
Confidence 455589999999999999999998875 3 399999999999999999888778888888754421 234554443221
Q ss_pred CCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 447 RGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 447 ~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
-. .-...-.+...+.+.|+|+|.++..
T Consensus 118 l~-----~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 118 LH-----YIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp GG-----GCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hh-----hhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 00 0122345567788899999998775
No 388
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.64 E-value=2.9e-08 Score=100.27 Aligned_cols=99 Identities=19% Similarity=0.280 Sum_probs=73.8
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---ccccccccccccccc---cccchhhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETIEII---PHILDLCY 442 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~~~l---~~~~d~i~ 442 (511)
+.+.+|.+|||+|||+|..|+.+|+.+++.++|+++|+++++++.+++|+. .. +.++++|..... +..||
T Consensus 97 L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD--- 172 (464)
T 3m6w_A 97 LDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFH--- 172 (464)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEE---
T ss_pred cCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCC---
Confidence 567899999999999999999999998666899999999988887776654 45 777777765432 12233
Q ss_pred hcccCCcEEEEEcC-CccH-------------------------HHHHHHHHhCCCcEEEE
Q psy7829 443 LNLHRGAKVLEIGS-GSGY-------------------------LATLMAHLVGPTGHVTG 477 (511)
Q Consensus 443 ~~l~~~~~vLD~~~-g~g~-------------------------~~~~l~~~l~~~g~v~~ 477 (511)
..++|..| |.|. +...+++.|+|||.++-
T Consensus 173 ------~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~Lvy 227 (464)
T 3m6w_A 173 ------RVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVY 227 (464)
T ss_dssp ------EEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ------EEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 34667777 5654 23445667899999864
No 389
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.64 E-value=3.5e-08 Score=92.68 Aligned_cols=111 Identities=14% Similarity=0.144 Sum_probs=75.1
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccccccccccccc-cc
Q psy7829 358 RSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEII-PH 436 (511)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~l-~~ 436 (511)
+....++.. +...++.+|||+|||+|..+..+++.. |..+|+++|+++++++.++++ .++++++.+|..+.. +.
T Consensus 20 ~~~~~l~~~--~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~--~~~~~~~~~d~~~~~~~~ 94 (259)
T 2p35_A 20 RPARDLLAQ--VPLERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADR--LPNTNFGKADLATWKPAQ 94 (259)
T ss_dssp HHHHHHHTT--CCCSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHH--STTSEEEECCTTTCCCSS
T ss_pred HHHHHHHHh--cCCCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh--CCCcEEEECChhhcCccC
Confidence 444555555 667788999999999999999999987 568999999999999988877 456777777654322 22
Q ss_pred cchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 437 ILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 437 ~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+|.++....-. .......+...+.+.|+|+|.++..
T Consensus 95 ~fD~v~~~~~l~-----~~~~~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 95 KADLLYANAVFQ-----WVPDHLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp CEEEEEEESCGG-----GSTTHHHHHHHHGGGEEEEEEEEEE
T ss_pred CcCEEEEeCchh-----hCCCHHHHHHHHHHhcCCCeEEEEE
Confidence 344443321100 0012334455666777888877654
No 390
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.64 E-value=4.4e-08 Score=92.98 Aligned_cols=107 Identities=16% Similarity=0.136 Sum_probs=73.0
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---cccccccccccccccccccchhhhhcc
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---STNHIDLIANETIEIIPHILDLCYLNL 445 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---~~~~v~~i~~d~~~~l~~~~d~i~~~l 445 (511)
+.+.++.+|||+|||+|..+..+++..+..++|+++|+++.+++.+++|+ +..+++++++|........ . ...-
T Consensus 79 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~-~--~~~~ 155 (274)
T 3ajd_A 79 LNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYL-L--KNEI 155 (274)
T ss_dssp HCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-H--HTTC
T ss_pred hCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhh-h--hccc
Confidence 56789999999999999999999998744489999999988888766664 4557888888765432110 0 0011
Q ss_pred cCCcEEEEEcC-CccH---------------------HHHHHHHHhCCCcEEEEh
Q psy7829 446 HRGAKVLEIGS-GSGY---------------------LATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 446 ~~~~~vLD~~~-g~g~---------------------~~~~l~~~l~~~g~v~~~ 478 (511)
..+..++|..| |.|. +...+.+.++|||.++-.
T Consensus 156 ~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~s 210 (274)
T 3ajd_A 156 FFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYS 210 (274)
T ss_dssp CEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 22345667777 4443 344566788999998763
No 391
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.64 E-value=5.5e-08 Score=91.62 Aligned_cols=110 Identities=18% Similarity=0.225 Sum_probs=77.3
Q ss_pred CCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccccccccccccc
Q psy7829 355 SSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEII 434 (511)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~l 434 (511)
..+.....++.. +...++.+|||||||+|..+..+++ +..+|+++|+++.+++.++++. +++++.+|..+..
T Consensus 18 ~~~~~~~~l~~~--~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~---~~~~~~~d~~~~~ 89 (261)
T 3ege_A 18 PDIRIVNAIINL--LNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP---QVEWFTGYAENLA 89 (261)
T ss_dssp CCHHHHHHHHHH--HCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT---TEEEECCCTTSCC
T ss_pred ccHHHHHHHHHH--hCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc---CCEEEECchhhCC
Confidence 355666677666 6778899999999999999999986 4489999999999988776665 7888877754421
Q ss_pred --cccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 435 --PHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 435 --~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
+..+|.++....-.. -.....+...+.+.|+ +|.++.+
T Consensus 90 ~~~~~fD~v~~~~~l~~-----~~~~~~~l~~~~~~Lk-gG~~~~~ 129 (261)
T 3ege_A 90 LPDKSVDGVISILAIHH-----FSHLEKSFQEMQRIIR-DGTIVLL 129 (261)
T ss_dssp SCTTCBSEEEEESCGGG-----CSSHHHHHHHHHHHBC-SSCEEEE
T ss_pred CCCCCEeEEEEcchHhh-----ccCHHHHHHHHHHHhC-CcEEEEE
Confidence 234555544321110 0233455677888888 8876654
No 392
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.64 E-value=6.1e-08 Score=98.15 Aligned_cols=72 Identities=18% Similarity=0.296 Sum_probs=57.2
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---ccccccccccccccc
Q psy7829 358 RSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETIEII 434 (511)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~~~l 434 (511)
..+..++.. +.+.++.+|||+|||+|.+++.+|+.. .+|+|+|+++++++.+++|.. ..|++++.+|..+.+
T Consensus 273 ~l~~~~~~~--l~~~~~~~VLDlgcG~G~~~~~la~~~---~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l 347 (433)
T 1uwv_A 273 KMVARALEW--LDVQPEDRVLDLFCGMGNFTLPLATQA---ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDV 347 (433)
T ss_dssp HHHHHHHHH--HTCCTTCEEEEESCTTTTTHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCC
T ss_pred HHHHHHHHh--hcCCCCCEEEECCCCCCHHHHHHHhhC---CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHh
Confidence 344445554 566788999999999999999999773 899999999998888877764 457889988876643
No 393
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.63 E-value=2.6e-08 Score=89.95 Aligned_cols=114 Identities=13% Similarity=0.178 Sum_probs=73.2
Q ss_pred CCCHHHHHHHHHHhhcCCC-CCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cccccccccc
Q psy7829 354 PSSERSIAHILDLCYLNLH-RGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANE 429 (511)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~-~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d 429 (511)
|.+......++.. +... ++.+|||+|||+|.+++.+++... .+|+++|+++++++.+++|+. ..+++++++|
T Consensus 36 p~~~~~~~~l~~~--l~~~~~~~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D 111 (202)
T 2fpo_A 36 PTTDRVRETLFNW--LAPVIVDAQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSN 111 (202)
T ss_dssp --CHHHHHHHHHH--HHHHHTTCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred CCHHHHHHHHHHH--HHhhcCCCeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECC
Confidence 4455666555554 3322 688999999999999998776542 599999999999988877764 3578888888
Q ss_pred cccccc---ccchhhhhcccCCcEEEEEcCCc-cHHHHHHHH--HhCCCcEEEEh
Q psy7829 430 TIEIIP---HILDLCYLNLHRGAKVLEIGSGS-GYLATLMAH--LVGPTGHVTGL 478 (511)
Q Consensus 430 ~~~~l~---~~~d~i~~~l~~~~~vLD~~~g~-g~~~~~l~~--~l~~~g~v~~~ 478 (511)
..+.++ ..+|.++.+..-. .+. ......+.+ .|+|+|.++..
T Consensus 112 ~~~~~~~~~~~fD~V~~~~p~~-------~~~~~~~l~~l~~~~~L~pgG~l~i~ 159 (202)
T 2fpo_A 112 AMSFLAQKGTPHNIVFVDPPFR-------RGLLEETINLLEDNGWLADEALIYVE 159 (202)
T ss_dssp HHHHHSSCCCCEEEEEECCSSS-------TTTHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HHHHHhhcCCCCCEEEECCCCC-------CCcHHHHHHHHHhcCccCCCcEEEEE
Confidence 665433 3455544432200 111 122333433 28899988755
No 394
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.63 E-value=5.9e-08 Score=92.10 Aligned_cols=67 Identities=28% Similarity=0.489 Sum_probs=53.5
Q ss_pred HHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHH------HHHHHHhhccc----ccccccccc
Q psy7829 361 AHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMD------IAIESIANIST----NHIDLIANE 429 (511)
Q Consensus 361 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~------~~~~~~~~~~~----~~v~~i~~d 429 (511)
.+++.. +.+.++.+|||||||+|.++..+++..+|+.+|+++|++++ +++.+++++.. ++++++.+|
T Consensus 33 ~~l~~~--~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 33 LAIAEA--WQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp HHHHHH--HTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred HHHHHH--cCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 344444 67889999999999999999999998877789999999876 67776666542 467777776
No 395
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.63 E-value=6.3e-08 Score=92.82 Aligned_cols=47 Identities=26% Similarity=0.343 Sum_probs=41.5
Q ss_pred CCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc
Q psy7829 372 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS 419 (511)
Q Consensus 372 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~ 419 (511)
.++.+|||||||+|..++.+++.+ +..+|+|+|+++.+++.+++++.
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~-~~~~v~gvDis~~~i~~A~~~~~ 91 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKW-GPSRMVGLDIDSRLIHSARQNIR 91 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHT-CCSEEEEEESCHHHHHHHHHTC-
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHH
Confidence 368999999999999999999997 34799999999999999888765
No 396
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.62 E-value=4.1e-08 Score=94.37 Aligned_cols=113 Identities=18% Similarity=0.115 Sum_probs=76.7
Q ss_pred HHHHHHHHHHhhc----CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-cccccccc
Q psy7829 357 ERSIAHILDLCYL----NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NHIDLIAN 428 (511)
Q Consensus 357 ~~~~~~~~~~~~~----~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~v~~i~~ 428 (511)
...+..++.. + .+.++.+|||||||+|..+..+++..+ .+|+++|+++.+++.++++.. . .+++++.+
T Consensus 64 ~~~~~~l~~~--l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 139 (297)
T 2o57_A 64 LRTDEWLASE--LAMTGVLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYG 139 (297)
T ss_dssp HHHHHHHHHH--HHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEEC
T ss_pred HHHHHHHHHH--hhhccCCCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEc
Confidence 3445555665 5 678899999999999999999998874 699999999999888777653 2 46788877
Q ss_pred cccccc--cccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 429 ETIEII--PHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 429 d~~~~l--~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
|..+.. +..+|.++....-. .......+...+.+.|+|+|.++..
T Consensus 140 d~~~~~~~~~~fD~v~~~~~l~-----~~~~~~~~l~~~~~~LkpgG~l~~~ 186 (297)
T 2o57_A 140 SFLEIPCEDNSYDFIWSQDAFL-----HSPDKLKVFQECARVLKPRGVMAIT 186 (297)
T ss_dssp CTTSCSSCTTCEEEEEEESCGG-----GCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcccCCCCCCCEeEEEecchhh-----hcCCHHHHHHHHHHHcCCCeEEEEE
Confidence 754421 22344433221000 0011245567788889999988765
No 397
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.62 E-value=8.7e-08 Score=89.62 Aligned_cols=48 Identities=19% Similarity=0.165 Sum_probs=41.0
Q ss_pred CCCCEEEEEeccccHHHHHHHHH--hCCCcEEEEEcCCHHHHHHHHhhccc
Q psy7829 372 HRGAKVLEIGSGSGYLATLMAHL--VGPTGHVTGLEHMMDIAIESIANIST 420 (511)
Q Consensus 372 ~~~~~vLdiG~G~G~~~~~la~~--~~~~~~v~~id~~~~~~~~~~~~~~~ 420 (511)
.++.+|||+|||+|.+++.+++. . +..+|+|+|+++++++.+++++..
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~-~~~~v~gvDis~~~l~~A~~~~~~ 99 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRR-SLRQVIASDVDPAPLELAAKNLAL 99 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGG-GEEEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhcc-CCCeEEEEECCHHHHHHHHHHHHH
Confidence 46789999999999999999987 4 447999999999999888876653
No 398
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.62 E-value=2.1e-08 Score=91.70 Aligned_cols=115 Identities=13% Similarity=0.203 Sum_probs=74.7
Q ss_pred CCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccc--------ccccc
Q psy7829 355 SSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTN--------HIDLI 426 (511)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~--------~v~~i 426 (511)
..+.....++.. +...++.+|||+|||+|.++..+++.. +..+|+++|+++++++.+++++... +++++
T Consensus 13 ~~~~~~~~l~~~--l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~ 89 (219)
T 3jwg_A 13 LNQQRLGTVVAV--LKSVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLF 89 (219)
T ss_dssp HHHHHHHHHHHH--HHHTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEE
T ss_pred chHHHHHHHHHH--HhhcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEE
Confidence 344555555555 455678999999999999999998765 5579999999999999988876532 67777
Q ss_pred cccccccc--cccchhhhhcccCCcEEEEEcCCc---cHHHHHHHHHhCCCcEEEEh
Q psy7829 427 ANETIEII--PHILDLCYLNLHRGAKVLEIGSGS---GYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 427 ~~d~~~~l--~~~~d~i~~~l~~~~~vLD~~~g~---g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+|..... +..+|.++.... +.. ... ..+...+.+.|+|+|.++..
T Consensus 90 ~~d~~~~~~~~~~fD~V~~~~~-----l~~-~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 90 QSSLVYRDKRFSGYDAATVIEV-----IEH-LDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp ECCSSSCCGGGTTCSEEEEESC-----GGG-CCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred eCcccccccccCCCCEEEEHHH-----HHh-CCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 77753211 123444332110 000 011 23456677888998866654
No 399
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.61 E-value=5.5e-08 Score=91.58 Aligned_cols=114 Identities=11% Similarity=0.007 Sum_probs=78.3
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccc----ccccccccccccc-ccchhhhhc
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNH----IDLIANETIEIIP-HILDLCYLN 444 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~----v~~i~~d~~~~l~-~~~d~i~~~ 444 (511)
.+++|++|||+|||+|++++.+|+..+ .+|+++|+++..++.+.+|+..++ ++++++|+.+... ..+|.+.++
T Consensus 122 ~~~~g~~VlD~~aG~G~~~i~~a~~g~--~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~ 199 (278)
T 3k6r_A 122 VAKPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMG 199 (278)
T ss_dssp HCCTTCEEEETTCTTTTTTHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEEC
T ss_pred hcCCCCEEEEecCcCcHHHHHHHHhcC--CeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEEC
Confidence 357899999999999999999998753 689999999988888777776433 6778888766543 345554444
Q ss_pred ccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh---------HHHHHHHHHHHHhcCC
Q psy7829 445 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL---------EHMMDIAIESIANIST 494 (511)
Q Consensus 445 l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~---------~~ml~~a~~~~~~~~~ 494 (511)
+ ..+.-.+.....+.+++||.+... ....+..++.....|.
T Consensus 200 ~---------p~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~ 249 (278)
T 3k6r_A 200 Y---------VVRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGY 249 (278)
T ss_dssp C---------CSSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTC
T ss_pred C---------CCcHHHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCC
Confidence 3 333334445566788998866432 2234555555555554
No 400
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.61 E-value=4.3e-08 Score=92.92 Aligned_cols=112 Identities=21% Similarity=0.287 Sum_probs=74.4
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc----cccccccccccccc
Q psy7829 358 RSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS----TNHIDLIANETIEI 433 (511)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~----~~~v~~i~~d~~~~ 433 (511)
..+..++.. +.+.++.+|||||||+|..+..+++..+ .+|+++|+++++++.++++.. .++++++.+|..+.
T Consensus 48 ~~~~~l~~~--~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 123 (273)
T 3bus_A 48 RLTDEMIAL--LDVRSGDRVLDVGCGIGKPAVRLATARD--VRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL 123 (273)
T ss_dssp HHHHHHHHH--SCCCTTCEEEEESCTTSHHHHHHHHHSC--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHh--cCCCCCCEEEEeCCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC
Confidence 334455554 6778999999999999999999998764 899999999999888777654 23577777765432
Q ss_pred --ccccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 434 --IPHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 434 --l~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+..+|.++.... +........+...+.+.|+|+|.++..
T Consensus 124 ~~~~~~fD~v~~~~~-----l~~~~~~~~~l~~~~~~L~pgG~l~i~ 165 (273)
T 3bus_A 124 PFEDASFDAVWALES-----LHHMPDRGRALREMARVLRPGGTVAIA 165 (273)
T ss_dssp CSCTTCEEEEEEESC-----TTTSSCHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCCCCCccEEEEech-----hhhCCCHHHHHHHHHHHcCCCeEEEEE
Confidence 1233444432210 000012334556677788888887654
No 401
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.60 E-value=3.6e-08 Score=93.65 Aligned_cols=104 Identities=19% Similarity=0.288 Sum_probs=74.3
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---ccccccccccccccc--cccchhhhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETIEII--PHILDLCYL 443 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~~~l--~~~~d~i~~ 443 (511)
..+.++.+|||||||+|..+..+++.. |..+|+++|+++.+++.++++.. .++++++.+|..+.. +..+|.++.
T Consensus 33 ~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 111 (276)
T 3mgg_A 33 TVYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFV 111 (276)
T ss_dssp CCCCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEE
T ss_pred ccCCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEE
Confidence 456789999999999999999999885 66899999999998888777653 457888877755432 234454443
Q ss_pred cccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 444 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 444 ~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.. ++........+...+.+.|+|+|.++..
T Consensus 112 ~~-----~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 112 CF-----VLEHLQSPEEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp ES-----CGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ec-----hhhhcCCHHHHHHHHHHHcCCCcEEEEE
Confidence 21 1111123345667788899999998763
No 402
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.60 E-value=2.9e-08 Score=89.61 Aligned_cols=110 Identities=16% Similarity=0.187 Sum_probs=71.0
Q ss_pred CHHHHHHHHHHhhcCC-CCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c--ccccccccc
Q psy7829 356 SERSIAHILDLCYLNL-HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T--NHIDLIANE 429 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~--~~v~~i~~d 429 (511)
+......++.. +.. .++.+|||+|||+|.+++.++... . .+|+++|+++++++.+++|+. . .+++++++|
T Consensus 37 ~~~~~~~l~~~--l~~~~~~~~vLDlGcGtG~~~~~~~~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d 112 (201)
T 2ift_A 37 GDRVKETLFNW--LMPYIHQSECLDGFAGSGSLGFEALSRQ-A-KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQS 112 (201)
T ss_dssp -CHHHHHHHHH--HHHHHTTCEEEETTCTTCHHHHHHHHTT-C-SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSC
T ss_pred HHHHHHHHHHH--HHHhcCCCeEEEcCCccCHHHHHHHHcc-C-CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECC
Confidence 33444444444 222 268899999999999999877654 2 699999999999988877764 3 578888888
Q ss_pred cccccc----cc-chhhhhcccCCcEEEEEcCCccHH---HHHH--HHHhCCCcEEEEh
Q psy7829 430 TIEIIP----HI-LDLCYLNLHRGAKVLEIGSGSGYL---ATLM--AHLVGPTGHVTGL 478 (511)
Q Consensus 430 ~~~~l~----~~-~d~i~~~l~~~~~vLD~~~g~g~~---~~~l--~~~l~~~g~v~~~ 478 (511)
..+.++ .. +|.++.+.. ...+.. ...+ .+.|+|+|.++..
T Consensus 113 ~~~~~~~~~~~~~fD~I~~~~~---------~~~~~~~~~l~~~~~~~~LkpgG~l~i~ 162 (201)
T 2ift_A 113 SLDFLKQPQNQPHFDVVFLDPP---------FHFNLAEQAISLLCENNWLKPNALIYVE 162 (201)
T ss_dssp HHHHTTSCCSSCCEEEEEECCC---------SSSCHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HHHHHHhhccCCCCCEEEECCC---------CCCccHHHHHHHHHhcCccCCCcEEEEE
Confidence 665433 23 555544322 112222 2233 2338999988765
No 403
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.59 E-value=3.9e-08 Score=93.91 Aligned_cols=117 Identities=15% Similarity=0.260 Sum_probs=80.1
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc--ccccccccccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST--NHIDLIANETIEI 433 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~--~~v~~i~~d~~~~ 433 (511)
.+.....++.. ...+.++.+|||||||+|..+..+++..++..+|+++|+++.+++.++++... .+++++.+|..+.
T Consensus 6 ~~~~~~~~~~~-~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 84 (284)
T 3gu3_A 6 NDDYVSFLVNT-VWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI 84 (284)
T ss_dssp CHHHHHHHHHT-TSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTC
T ss_pred chHHHHHHHHH-HhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhc
Confidence 34455555554 34677899999999999999999998873347999999999999988877542 3688888876543
Q ss_pred c-cccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 434 I-PHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 434 l-~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
. +..+|.++.... +..-.....+...+.+.|+|+|.++..
T Consensus 85 ~~~~~fD~v~~~~~-----l~~~~~~~~~l~~~~~~LkpgG~l~~~ 125 (284)
T 3gu3_A 85 ELNDKYDIAICHAF-----LLHMTTPETMLQKMIHSVKKGGKIICF 125 (284)
T ss_dssp CCSSCEEEEEEESC-----GGGCSSHHHHHHHHHHTEEEEEEEEEE
T ss_pred CcCCCeeEEEECCh-----hhcCCCHHHHHHHHHHHcCCCCEEEEE
Confidence 2 234554443221 000112345567788889999998854
No 404
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.59 E-value=4.8e-08 Score=91.15 Aligned_cols=73 Identities=15% Similarity=0.271 Sum_probs=62.6
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-cccccccccccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-TNHIDLIANETIEI 433 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-~~~v~~i~~d~~~~ 433 (511)
.+..+.+++.. +.+.++++|||||||+|.+|..+++.. .+|+++|++++++..+++++. ..+++++++|..+.
T Consensus 14 d~~i~~~iv~~--~~~~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 14 DSFVLQKIVSA--IHPQKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQF 87 (255)
T ss_dssp CHHHHHHHHHH--HCCCTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTC
T ss_pred CHHHHHHHHHh--cCCCCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhC
Confidence 35677778887 788899999999999999999999765 799999999999999888876 46899999987664
No 405
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.59 E-value=1.4e-07 Score=86.16 Aligned_cols=114 Identities=13% Similarity=0.160 Sum_probs=74.6
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccc--------cccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTN--------HIDLIA 427 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~--------~v~~i~ 427 (511)
.+.....++.. +...++.+|||+|||+|.++..+++.. +..+|+++|+++++++.+++++... +++++.
T Consensus 14 ~~~~~~~l~~~--l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 90 (217)
T 3jwh_A 14 NQQRMNGVVAA--LKQSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQ 90 (217)
T ss_dssp HHHHHHHHHHH--HHHTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEE
T ss_pred HHHHHHHHHHH--HHhcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEe
Confidence 44555566565 555688999999999999999999765 5579999999999999988876522 577777
Q ss_pred ccccccc--cccchhhhhcccCCcEEEEEcCCc---cHHHHHHHHHhCCCcEEEEh
Q psy7829 428 NETIEII--PHILDLCYLNLHRGAKVLEIGSGS---GYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 428 ~d~~~~l--~~~~d~i~~~l~~~~~vLD~~~g~---g~~~~~l~~~l~~~g~v~~~ 478 (511)
+|..... ...+|.++.... +.. ... ..+...+.+.|+|+|.++..
T Consensus 91 ~d~~~~~~~~~~fD~v~~~~~-----l~~-~~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 91 GALTYQDKRFHGYDAATVIEV-----IEH-LDLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp CCTTSCCGGGCSCSEEEEESC-----GGG-CCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred CCcccccccCCCcCEEeeHHH-----HHc-CCHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 7642211 123444332110 000 011 23455677788998876655
No 406
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.59 E-value=2.8e-08 Score=90.05 Aligned_cols=96 Identities=17% Similarity=0.231 Sum_probs=68.6
Q ss_pred CCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cccccccccccccccc-ccchhhhhcccCC
Q psy7829 373 RGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETIEIIP-HILDLCYLNLHRG 448 (511)
Q Consensus 373 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~~~l~-~~~d~i~~~l~~~ 448 (511)
++.+|||+|||+|..+..+++.. |..+|+++|+++.+++.++++.. ..+++++.+|..+..+ ..+|.++.+.-
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~-- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAF-- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCS--
T ss_pred CCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEecc--
Confidence 58899999999999999999886 56899999999988887776643 4557888777655432 33454443210
Q ss_pred cEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 449 AKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 449 ~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.....+...+.+.++|+|.++..
T Consensus 142 -------~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 142 -------ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp -------SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred -------CCHHHHHHHHHHhcCCCcEEEEE
Confidence 11234455666778999998776
No 407
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.59 E-value=5.9e-08 Score=89.68 Aligned_cols=113 Identities=11% Similarity=0.116 Sum_probs=76.1
Q ss_pred HHHHHHHHHhhcC-CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc-ccccccccccccccc
Q psy7829 358 RSIAHILDLCYLN-LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST-NHIDLIANETIEIIP 435 (511)
Q Consensus 358 ~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~-~~v~~i~~d~~~~l~ 435 (511)
.....++.. +. ..++.+|||+|||+|..+..+++.. |..+|+++|+++++++.++++... .+++++.+|..+...
T Consensus 30 ~~~~~~~~~--~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~ 106 (234)
T 3dtn_A 30 DFYGVSVSI--ASVDTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDF 106 (234)
T ss_dssp HHHHHHHHT--CCCSCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCC
T ss_pred HHHHHHHHH--hhcCCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCC
Confidence 334444444 33 5678999999999999999999887 568999999999999998888763 368888777654321
Q ss_pred -ccchhhhhcccCCcEEEEEcCCcc--HHHHHHHHHhCCCcEEEEh
Q psy7829 436 -HILDLCYLNLHRGAKVLEIGSGSG--YLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 436 -~~~d~i~~~l~~~~~vLD~~~g~g--~~~~~l~~~l~~~g~v~~~ 478 (511)
..+|.++.... +..-.... .+...+.+.|+|+|.++..
T Consensus 107 ~~~fD~v~~~~~-----l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 147 (234)
T 3dtn_A 107 EEKYDMVVSALS-----IHHLEDEDKKELYKRSYSILKESGIFINA 147 (234)
T ss_dssp CSCEEEEEEESC-----GGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCceEEEEeCc-----cccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 33444333210 00000011 2456778889999998864
No 408
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.59 E-value=5.2e-08 Score=93.05 Aligned_cols=107 Identities=11% Similarity=0.101 Sum_probs=73.6
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc--------cccccccccccccccc---ccc
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS--------TNHIDLIANETIEIIP---HIL 438 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~--------~~~v~~i~~d~~~~l~---~~~ 438 (511)
..+++.+|||||||+|..+..+++.. +..+|+++|+++++++.+++++. .++++++.+|+.+.+. ..+
T Consensus 80 ~~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~f 158 (294)
T 3adn_A 80 AHGHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTF 158 (294)
T ss_dssp HSTTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCE
T ss_pred cCCCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCc
Confidence 34567899999999999999999764 45799999999999998887754 3478999999877653 457
Q ss_pred hhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 439 DLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 439 d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
|.++.+...... ..-..-+-.+...+.+.|+|+|.++..
T Consensus 159 DvIi~D~~~p~~-~~~~l~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 159 DVIISDCTDPIG-PGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EEEEECC-----------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred cEEEECCCCccC-cchhccHHHHHHHHHHhcCCCCEEEEe
Confidence 777665443210 000011234556778889999988763
No 409
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.58 E-value=8.1e-08 Score=89.20 Aligned_cols=100 Identities=10% Similarity=0.080 Sum_probs=73.2
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccccccccccccc--cccchhhhhcccCC
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEII--PHILDLCYLNLHRG 448 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~l--~~~~d~i~~~l~~~ 448 (511)
++++.+|||+|||+|.++..+++.. .+|+++|+++.+++.+.++....+++++.+|..+.. +..+|.++....-.
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 127 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRTG---YKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLE 127 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTT
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHh
Confidence 4688999999999999999999873 799999999999999999877788888888755431 23455444321100
Q ss_pred cEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 449 AKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 449 ~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.......+...+.+.|+|+|.++..
T Consensus 128 -----~~~~~~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 128 -----WTEEPLRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp -----SSSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----hccCHHHHHHHHHHHhCCCeEEEEE
Confidence 0112335567788889999988765
No 410
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.58 E-value=2.4e-07 Score=97.61 Aligned_cols=128 Identities=13% Similarity=-0.047 Sum_probs=85.0
Q ss_pred CcccchhHHHHHHHHH----HhhcCCCCCEEEEEcCCccHHHHHHHHHhC--CCceEEEEeCCHHHHHHH--HHHHhccC
Q psy7829 111 AGVMNAPNQIADAAEN----LKLHLVDGAKVLDLGSGSGYQTCVFAHMVG--PTGKVIGVEHIPELIEAS--LRNISKGN 182 (511)
Q Consensus 111 ~~~~~~p~~~~~~~~~----l~~~~~~~~~vLDiG~G~G~~~~~la~~~~--~~~~v~~iD~~~~~~~~a--~~~~~~~~ 182 (511)
|...+.+.+...+++. +.....++.+|||.|||+|.+...+++..+ ...+++|+|+++.+++.| +.++..++
T Consensus 295 GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~ 374 (878)
T 3s1s_A 295 GVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQ 374 (878)
T ss_dssp BSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTT
T ss_pred ceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhh
Confidence 3344444566666665 222234688999999999999999998763 136799999999999999 55554321
Q ss_pred CCcCCCCCeEEEEccCCCC-CCCCCCccEEEecCCCCc-----------------------------------hHHHHHh
Q psy7829 183 KDLLDSGRVRIVEADAREG-YLPEAPYDVIYYGGCVSE-----------------------------------VPSRVLN 226 (511)
Q Consensus 183 ~~~~~~~~v~~~~~d~~~~-~~~~~~fD~I~~~~~~~~-----------------------------------~~~~~~~ 226 (511)
.. .+.....+...|+... ......||+|++|+|+-. +...+.+
T Consensus 375 Ll-hGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~ 453 (878)
T 3s1s_A 375 LV-SSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTE 453 (878)
T ss_dssp TC-BTTBCCEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHH
T ss_pred hh-cCCCcceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHH
Confidence 00 0122345555565542 112467999999999821 1245778
Q ss_pred hcccCcEEEEEEc
Q psy7829 227 QLKKGGRILAPIG 239 (511)
Q Consensus 227 ~LkpgG~l~~~~~ 239 (511)
.|+|||++++.+.
T Consensus 454 lLKpGGrLAfIlP 466 (878)
T 3s1s_A 454 LVQDGTVISAIMP 466 (878)
T ss_dssp HSCTTCEEEEEEE
T ss_pred hcCCCcEEEEEEC
Confidence 8999999998654
No 411
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.58 E-value=9.9e-08 Score=90.95 Aligned_cols=84 Identities=19% Similarity=0.296 Sum_probs=65.4
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----ccccccccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NHIDLIANETI 431 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~v~~i~~d~~ 431 (511)
.+..+.+++.. +.+.++++|||||||+|.++..+++.. .+|+++|+++.+++.+.++... ++++++++|..
T Consensus 13 d~~i~~~i~~~--~~~~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~ 87 (285)
T 1zq9_A 13 NPLIINSIIDK--AALRPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVL 87 (285)
T ss_dssp CHHHHHHHHHH--TCCCTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTT
T ss_pred CHHHHHHHHHh--cCCCCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEccee
Confidence 45677777777 777899999999999999999999885 7999999999999988877642 57888888876
Q ss_pred ccccccchhhhhc
Q psy7829 432 EIIPHILDLCYLN 444 (511)
Q Consensus 432 ~~l~~~~d~i~~~ 444 (511)
+.-...+|.++.+
T Consensus 88 ~~~~~~fD~vv~n 100 (285)
T 1zq9_A 88 KTDLPFFDTCVAN 100 (285)
T ss_dssp TSCCCCCSEEEEE
T ss_pred cccchhhcEEEEe
Confidence 5322234444443
No 412
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.57 E-value=6.8e-08 Score=91.93 Aligned_cols=105 Identities=18% Similarity=0.259 Sum_probs=72.1
Q ss_pred HHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccccccccccccc-cccchh
Q psy7829 362 HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEII-PHILDL 440 (511)
Q Consensus 362 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~l-~~~~d~ 440 (511)
.++.. +.+.++.+|||||||+|.++..+++ +..+|+++|+++.+++.++++. +++.++.+|..... +..+|.
T Consensus 48 ~l~~~--l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~--~~~~~~~~d~~~~~~~~~fD~ 120 (279)
T 3ccf_A 48 DLLQL--LNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY--PHLHFDVADARNFRVDKPLDA 120 (279)
T ss_dssp HHHHH--HCCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC--TTSCEEECCTTTCCCSSCEEE
T ss_pred HHHHH--hCCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC--CCCEEEECChhhCCcCCCcCE
Confidence 34444 5667899999999999999999987 3489999999999999988876 56777777654321 233444
Q ss_pred hhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 441 CYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 441 i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
++....-. .-.....+...+.+.|+|+|.++..
T Consensus 121 v~~~~~l~-----~~~d~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 121 VFSNAMLH-----WVKEPEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp EEEESCGG-----GCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEcchhh-----hCcCHHHHHHHHHHhcCCCcEEEEE
Confidence 43321100 0012334567778888999888764
No 413
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.57 E-value=8.9e-08 Score=90.56 Aligned_cols=75 Identities=19% Similarity=0.279 Sum_probs=62.6
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCC-CcEEEEEcCCHHHHHHHHhhcccccccccccccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGP-TGHVTGLEHMMDIAIESIANISTNHIDLIANETIEI 433 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~-~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~ 433 (511)
.+..+.+++.. +.+.++++|||||||+|.+|..+++..+. +++|+++|++++++..++++. ..+++++++|..+.
T Consensus 27 d~~i~~~iv~~--~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 27 DHGVIDAIVAA--IRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-GELLELHAGDALTF 102 (279)
T ss_dssp CHHHHHHHHHH--HCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-GGGEEEEESCGGGC
T ss_pred CHHHHHHHHHh--cCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-CCCcEEEECChhcC
Confidence 35667777777 77889999999999999999999998732 255999999999999988875 66899999987664
No 414
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.57 E-value=5.9e-08 Score=93.16 Aligned_cols=84 Identities=20% Similarity=0.321 Sum_probs=61.7
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---cccccccccccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---STNHIDLIANETIE 432 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---~~~~v~~i~~d~~~ 432 (511)
.+..+..++.. +.+.++++|||||||+|.++..+++.. .+|+|+|+++.+++.++++. +.++++++++|..+
T Consensus 27 ~~~i~~~i~~~--~~~~~~~~VLDiG~G~G~lt~~La~~~---~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~ 101 (299)
T 2h1r_A 27 NPGILDKIIYA--AKIKSSDIVLEIGCGTGNLTVKLLPLA---KKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIK 101 (299)
T ss_dssp CHHHHHHHHHH--HCCCTTCEEEEECCTTSTTHHHHTTTS---SEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCS
T ss_pred CHHHHHHHHHh--cCCCCcCEEEEEcCcCcHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhh
Confidence 45667777776 677889999999999999999998763 79999999999998887765 34678999888766
Q ss_pred cccccchhhhhc
Q psy7829 433 IIPHILDLCYLN 444 (511)
Q Consensus 433 ~l~~~~d~i~~~ 444 (511)
.....+|.++.+
T Consensus 102 ~~~~~~D~Vv~n 113 (299)
T 2h1r_A 102 TVFPKFDVCTAN 113 (299)
T ss_dssp SCCCCCSEEEEE
T ss_pred CCcccCCEEEEc
Confidence 433344544443
No 415
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.56 E-value=1.5e-07 Score=87.33 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=73.3
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccccccccccccc--cccchhhhhccc
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEII--PHILDLCYLNLH 446 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~l--~~~~d~i~~~l~ 446 (511)
+...++.+|||+|||+|..+..+++.. . .+|+++|+++++++.++++....+++++.+|..+.. +..+|.++....
T Consensus 39 ~~~~~~~~vLdiG~G~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 116 (243)
T 3bkw_A 39 LPEVGGLRIVDLGCGFGWFCRWAHEHG-A-SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLA 116 (243)
T ss_dssp SCCCTTCEEEEETCTTCHHHHHHHHTT-C-SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESC
T ss_pred ccccCCCEEEEEcCcCCHHHHHHHHCC-C-CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEecc
Confidence 566689999999999999999998763 2 399999999999999999887777888877754422 233444433211
Q ss_pred CCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 447 RGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 447 ~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
-.. -.....+...+.+.|+|+|.++..
T Consensus 117 l~~-----~~~~~~~l~~~~~~L~pgG~l~~~ 143 (243)
T 3bkw_A 117 LHY-----VEDVARLFRTVHQALSPGGHFVFS 143 (243)
T ss_dssp GGG-----CSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccc-----cchHHHHHHHHHHhcCcCcEEEEE
Confidence 000 012344567778889999988765
No 416
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.56 E-value=1.2e-07 Score=87.39 Aligned_cols=103 Identities=17% Similarity=0.202 Sum_probs=65.7
Q ss_pred HHHHHHHHhhcCCC-CCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc------cccccccccccc
Q psy7829 359 SIAHILDLCYLNLH-RGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS------TNHIDLIANETI 431 (511)
Q Consensus 359 ~~~~~~~~~~~~~~-~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~------~~~v~~i~~d~~ 431 (511)
...+++.. +.+. ++.+|||||||+|.++..+++.. . .+|+|+|+++++++.+.++.. ..++..+..+..
T Consensus 24 kL~~~L~~--~~~~~~g~~VLDiGcGtG~~t~~la~~g-~-~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~ 99 (232)
T 3opn_A 24 KLEKALKE--FHLEINGKTCLDIGSSTGGFTDVMLQNG-A-KLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADF 99 (232)
T ss_dssp HHHHHHHH--TTCCCTTCEEEEETCTTSHHHHHHHHTT-C-SEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGC
T ss_pred HHHHHHHH--cCCCCCCCEEEEEccCCCHHHHHHHhcC-C-CEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHc
Confidence 34566665 4544 56799999999999999998773 2 599999999888777665433 123433332211
Q ss_pred cc--c-cccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 432 EI--I-PHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 432 ~~--l-~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
+. . ...+|.++.. ...+...+.+.|+|+|.++.+
T Consensus 100 ~~~~~d~~~~D~v~~~-------------l~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 100 EQGRPSFTSIDVSFIS-------------LDLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp CSCCCSEEEECCSSSC-------------GGGTHHHHHHHSCTTCEEEEE
T ss_pred CcCCCCEEEEEEEhhh-------------HHHHHHHHHHhccCCCEEEEE
Confidence 11 0 1123333322 244567888889999988765
No 417
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.56 E-value=7.3e-08 Score=92.01 Aligned_cols=98 Identities=17% Similarity=0.217 Sum_probs=70.0
Q ss_pred CCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----cccccccccccccc---cccchhhhhcc
Q psy7829 373 RGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NHIDLIANETIEII---PHILDLCYLNL 445 (511)
Q Consensus 373 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~v~~i~~d~~~~l---~~~~d~i~~~l 445 (511)
++.+|||||||+|.++..+++.. .+|+++|+++++++.+++++.. .+++++.+|..+.. +..+|.++...
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 144 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERG---HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHA 144 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEES
T ss_pred CCCEEEEeCCcchHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECc
Confidence 47899999999999999999873 7999999999999988877653 56778888765433 23455444321
Q ss_pred cCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 446 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 446 ~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
++..-.....+...+.+.|+|+|.++..
T Consensus 145 -----~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 145 -----VLEWVADPRSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp -----CGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred -----hhhcccCHHHHHHHHHHHcCCCeEEEEE
Confidence 0101123345667888899999998765
No 418
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.55 E-value=7.7e-08 Score=87.71 Aligned_cols=100 Identities=18% Similarity=0.225 Sum_probs=70.2
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccccccccccccc-cccchhhhhcccCC
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEII-PHILDLCYLNLHRG 448 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~l-~~~~d~i~~~l~~~ 448 (511)
.+.++.+|||+|||+|.++..+++.. .+|+++|+++++++.+++ .+..+++++.+|..+.. +..+|.++...
T Consensus 43 ~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~-~~~~~~~~~~~d~~~~~~~~~~D~v~~~~--- 115 (218)
T 3ou2_A 43 AGNIRGDVLELASGTGYWTRHLSGLA---DRVTALDGSAEMIAEAGR-HGLDNVEFRQQDLFDWTPDRQWDAVFFAH--- 115 (218)
T ss_dssp TTTSCSEEEEESCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHGG-GCCTTEEEEECCTTSCCCSSCEEEEEEES---
T ss_pred cCCCCCeEEEECCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHh-cCCCCeEEEecccccCCCCCceeEEEEec---
Confidence 36788899999999999999999883 799999999999999887 45577888888765542 23344433221
Q ss_pred cEEEEEcCC--ccHHHHHHHHHhCCCcEEEEh
Q psy7829 449 AKVLEIGSG--SGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 449 ~~vLD~~~g--~g~~~~~l~~~l~~~g~v~~~ 478 (511)
++..... ...+...+.+.|+|+|.++..
T Consensus 116 --~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 145 (218)
T 3ou2_A 116 --WLAHVPDDRFEAFWESVRSAVAPGGVVEFV 145 (218)
T ss_dssp --CGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --hhhcCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 0000000 134456777888999988766
No 419
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.55 E-value=1.9e-07 Score=86.89 Aligned_cols=73 Identities=18% Similarity=0.370 Sum_probs=61.5
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-cccccccccccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-TNHIDLIANETIEI 433 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-~~~v~~i~~d~~~~ 433 (511)
.+..+.+++.. +.+.++++|||||||+|.++..+++.. .+|+++|+++++++.+++++. .++++++++|..+.
T Consensus 15 d~~~~~~i~~~--~~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 15 SKHNIDKIMTN--IRLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQF 88 (244)
T ss_dssp CHHHHHHHHTT--CCCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGC
T ss_pred CHHHHHHHHHh--CCCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhC
Confidence 45667777776 677889999999999999999999886 799999999999999888775 36788988887653
No 420
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.54 E-value=6.9e-08 Score=92.33 Aligned_cols=102 Identities=14% Similarity=0.123 Sum_probs=75.1
Q ss_pred CEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc---ccccccccccccccc----ccchhhhhcccC
Q psy7829 375 AKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST---NHIDLIANETIEIIP----HILDLCYLNLHR 447 (511)
Q Consensus 375 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~---~~v~~i~~d~~~~l~----~~~d~i~~~l~~ 447 (511)
.+|||||||+|.++..+++.. |+.+|++||+++++++.+++++.. ++++++.+|+.+.+. ..+|.++.+...
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 399999999999999999877 668999999999999999998874 568899999776643 356766655433
Q ss_pred CcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 448 GAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 448 ~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
..... ..--+-.+...+.+.|+|+|.++..
T Consensus 170 ~~~~~-~~L~t~efl~~~~r~LkpgGvlv~~ 199 (317)
T 3gjy_A 170 GAITP-QNFTTVEFFEHCHRGLAPGGLYVAN 199 (317)
T ss_dssp TSCCC-GGGSBHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccc-hhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 22110 0001234567778889999988765
No 421
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.54 E-value=1.5e-07 Score=95.30 Aligned_cols=104 Identities=11% Similarity=0.095 Sum_probs=71.9
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccc--ccccccccccccccccchhhhhccc
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTN--HIDLIANETIEIIPHILDLCYLNLH 446 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~--~v~~i~~d~~~~l~~~~d~i~~~l~ 446 (511)
+...++.+|||+|||+|..+..+++.. ++++|+++|+++.+++.+.+|+... +++++.+|.....+. +..-.
T Consensus 242 l~~~~g~~VLDlgaG~G~~t~~la~~~-~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~-----~~~~~ 315 (429)
T 1sqg_A 242 LAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW-----CGEQQ 315 (429)
T ss_dssp HCCCTTCEEEEESCTTCHHHHHHHHHC-TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHH-----HTTCC
T ss_pred cCCCCcCeEEEECCCchHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhh-----cccCC
Confidence 677899999999999999999999987 4589999999987777766665422 356666665443210 00112
Q ss_pred CCcEEEEEcC-CccH-------------------------HHHHHHHHhCCCcEEEEh
Q psy7829 447 RGAKVLEIGS-GSGY-------------------------LATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 447 ~~~~vLD~~~-g~g~-------------------------~~~~l~~~l~~~g~v~~~ 478 (511)
.+..++|..| |.|. +...+.+.++|||.++-.
T Consensus 316 fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvys 373 (429)
T 1sqg_A 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA 373 (429)
T ss_dssp EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 2345667777 5663 344566778999998753
No 422
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.54 E-value=1e-07 Score=90.66 Aligned_cols=105 Identities=16% Similarity=0.078 Sum_probs=73.5
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc-------------cccccccccccccccc--c
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI-------------STNHIDLIANETIEII--P 435 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~-------------~~~~v~~i~~d~~~~l--~ 435 (511)
...+.+|||||||+|.++..+++. +..+|+++|+++++++.+++++ ..++++++.+|+.+.+ +
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~ 150 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNN 150 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHC
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhccc
Confidence 456789999999999999999876 3479999999999999988877 2356888888876544 3
Q ss_pred ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 436 HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 436 ~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
..+|.++.+........ -.--+-.+...+.+.|+|+|.++..
T Consensus 151 ~~fD~Ii~d~~~~~~~~-~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 151 RGFDVIIADSTDPVGPA-KVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp CCEEEEEEECCCCC------TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCeeEEEECCCCCCCcc-hhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 45666665443211000 0000234556778889999988764
No 423
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.53 E-value=4.4e-08 Score=91.27 Aligned_cols=99 Identities=18% Similarity=0.186 Sum_probs=70.8
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccccccccccccc-cccchhhhhcccCCc
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEII-PHILDLCYLNLHRGA 449 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~l-~~~~d~i~~~l~~~~ 449 (511)
..++.+|||||||+|.++..+++.. .+|+++|+++++++.++++... +++++.+|..+.. +..+|.++...
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~-~v~~~~~d~~~~~~~~~fD~v~~~~---- 111 (250)
T 2p7i_A 40 FFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD-GITYIHSRFEDAQLPRRYDNIVLTH---- 111 (250)
T ss_dssp GCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS-CEEEEESCGGGCCCSSCEEEEEEES----
T ss_pred hcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC-CeEEEEccHHHcCcCCcccEEEEhh----
Confidence 4578899999999999999998764 5899999999999999888765 7888877765432 23345443321
Q ss_pred EEEEEcCCccHHHHHHH-HHhCCCcEEEEh
Q psy7829 450 KVLEIGSGSGYLATLMA-HLVGPTGHVTGL 478 (511)
Q Consensus 450 ~vLD~~~g~g~~~~~l~-~~l~~~g~v~~~ 478 (511)
++..-..+..+...+. +.|+|+|.++..
T Consensus 112 -~l~~~~~~~~~l~~~~~~~LkpgG~l~i~ 140 (250)
T 2p7i_A 112 -VLEHIDDPVALLKRINDDWLAEGGRLFLV 140 (250)
T ss_dssp -CGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred -HHHhhcCHHHHHHHHHHHhcCCCCEEEEE
Confidence 1111113345667788 888999988766
No 424
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.52 E-value=5.2e-08 Score=97.03 Aligned_cols=121 Identities=12% Similarity=0.088 Sum_probs=78.9
Q ss_pred CCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cc--ccccccccccccccc------cchh
Q psy7829 372 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TN--HIDLIANETIEIIPH------ILDL 440 (511)
Q Consensus 372 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~--~v~~i~~d~~~~l~~------~~d~ 440 (511)
.++.+|||+|||+|.+++.+|+... .+|+++|+++++++.+++|+. .. +++++++|..+.++. .+|.
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga--~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~ 288 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGA--MATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDI 288 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTB--SEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccE
Confidence 6789999999999999999997531 589999999888888777765 33 678899987665432 4566
Q ss_pred hhhcccCCc----EEEEEcCCccHHHHHHHHHhCCCcEEEEh--------HHHHHHHHHHHHhcCC
Q psy7829 441 CYLNLHRGA----KVLEIGSGSGYLATLMAHLVGPTGHVTGL--------EHMMDIAIESIANIST 494 (511)
Q Consensus 441 i~~~l~~~~----~vLD~~~g~g~~~~~l~~~l~~~g~v~~~--------~~ml~~a~~~~~~~~~ 494 (511)
++.+.+... .+.+.......+...+.+.++|+|.++.. +...+..++.+...+.
T Consensus 289 Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~ 354 (385)
T 2b78_A 289 IIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKH 354 (385)
T ss_dssp EEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCC
T ss_pred EEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCC
Confidence 655443311 00000000001223445778999988765 5555666666666554
No 425
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.52 E-value=1.7e-07 Score=87.03 Aligned_cols=96 Identities=17% Similarity=0.134 Sum_probs=64.4
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccccccccccccc----cccchhhhhcc
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEII----PHILDLCYLNL 445 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~l----~~~~d~i~~~l 445 (511)
.++++.+|||||||+|.++..+++.. .+|+++|+++++++.+.++ ++++..|..+.+ +..+|.++...
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~-----~~~~~~d~~~~~~~~~~~~fD~i~~~~ 109 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEEG---IESIGVDINEDMIKFCEGK-----FNVVKSDAIEYLKSLPDKYLDGVMISH 109 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHHT---CCEEEECSCHHHHHHHHTT-----SEEECSCHHHHHHTSCTTCBSEEEEES
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhCC---CcEEEEECCHHHHHHHHhh-----cceeeccHHHHhhhcCCCCeeEEEECC
Confidence 45688999999999999999998873 6899999999999998877 555555543321 23344443321
Q ss_pred cCCcEEEEEcC--CccHHHHHHHHHhCCCcEEEEh
Q psy7829 446 HRGAKVLEIGS--GSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 446 ~~~~~vLD~~~--g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
++..-. ....+...+.+.|+|+|.++..
T Consensus 110 -----~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (240)
T 3dli_A 110 -----FVEHLDPERLFELLSLCYSKMKYSSYIVIE 139 (240)
T ss_dssp -----CGGGSCGGGHHHHHHHHHHHBCTTCCEEEE
T ss_pred -----chhhCCcHHHHHHHHHHHHHcCCCcEEEEE
Confidence 000001 1134556777888888887655
No 426
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.51 E-value=1.3e-07 Score=88.12 Aligned_cols=73 Identities=19% Similarity=0.343 Sum_probs=62.1
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccccccccccccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEI 433 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~ 433 (511)
.+..+.+++.. +.+.++++|||||||+|.++..+++.. ..+|+++|+++.++..+.++ ...+++++++|..+.
T Consensus 16 d~~i~~~iv~~--~~~~~~~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~-~~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 16 SEGVLKKIAEE--LNIEEGNTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSI-GDERLEVINEDASKF 88 (249)
T ss_dssp CHHHHHHHHHH--TTCCTTCEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTS-CCTTEEEECSCTTTC
T ss_pred CHHHHHHHHHh--cCCCCcCEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhc-cCCCeEEEEcchhhC
Confidence 35677778777 778899999999999999999998762 37999999999999999888 667899999987654
No 427
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.51 E-value=1.1e-07 Score=89.45 Aligned_cols=102 Identities=11% Similarity=0.037 Sum_probs=67.7
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc--cccccccccccccccc--cccchhhhhc
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI--STNHIDLIANETIEII--PHILDLCYLN 444 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~--~~~~v~~i~~d~~~~l--~~~~d~i~~~ 444 (511)
..+.++.+|||+|||+|..+..+++.. .+|+++|+++++++.++++. ...++.++.+|..+.. +..+|.++..
T Consensus 35 ~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 111 (263)
T 2yqz_A 35 HPKGEEPVFLELGVGTGRIALPLIARG---YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVV 111 (263)
T ss_dssp CCSSSCCEEEEETCTTSTTHHHHHTTT---CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEE
T ss_pred cCCCCCCEEEEeCCcCCHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEEC
Confidence 366789999999999999999998763 79999999999999988875 2456777777654321 1233433321
Q ss_pred ccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 445 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 445 l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
..-. .-.....+...+.+.|+|+|.++..
T Consensus 112 ~~l~-----~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 112 HLWH-----LVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp SCGG-----GCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred Cchh-----hcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 1000 0002234456667777888876653
No 428
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.51 E-value=1.1e-07 Score=91.04 Aligned_cols=106 Identities=10% Similarity=-0.012 Sum_probs=72.6
Q ss_pred CCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-------cccccccccccccccc---ccchhh
Q psy7829 372 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-------TNHIDLIANETIEIIP---HILDLC 441 (511)
Q Consensus 372 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-------~~~v~~i~~d~~~~l~---~~~d~i 441 (511)
..+.+|||||||+|..+..+++.. +..+|+++|+++++++.+++++. .++++++.+|+.+.++ ..+|.+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 167 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI 167 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEE
Confidence 456899999999999999998764 45899999999999998887763 3578888888765442 346666
Q ss_pred hhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 442 YLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 442 ~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
+.+....+.-....--+-.+...+.+.|+|+|.++..
T Consensus 168 i~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 168 IIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp EEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 6543221000000001234556778889999988764
No 429
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.50 E-value=3.3e-07 Score=91.11 Aligned_cols=112 Identities=13% Similarity=0.089 Sum_probs=74.9
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccc--ccccccccccc---ccchhhhhcc
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHID--LIANETIEIIP---HILDLCYLNL 445 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~--~i~~d~~~~l~---~~~d~i~~~l 445 (511)
.++|.+|||+|||+|.+++.+|+.. ..|+++|+++.+++.+++|+..+++. +.++|..+.++ ..+|.++.
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~g---a~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~-- 286 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARKG---AYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLL-- 286 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEE--
T ss_pred hcCCCeEEEcccchhHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEE--
Confidence 4569999999999999999999763 45999999999999988887655443 55666555432 12454443
Q ss_pred cCCcEEEEEcC-------------CccHHHHHHHHHhCCCcEEEEh--------HHHHHHHHHHHHhcCC
Q psy7829 446 HRGAKVLEIGS-------------GSGYLATLMAHLVGPTGHVTGL--------EHMMDIAIESIANIST 494 (511)
Q Consensus 446 ~~~~~vLD~~~-------------g~g~~~~~l~~~l~~~g~v~~~--------~~ml~~a~~~~~~~~~ 494 (511)
|..| +.-.+...+.+.|+|+|.++.. +.+.+..++.+...+.
T Consensus 287 -------dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~ 349 (393)
T 4dmg_A 287 -------DPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGR 349 (393)
T ss_dssp -------CCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTC
T ss_pred -------CCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCC
Confidence 3333 1113345556788999998744 4444555555555554
No 430
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.50 E-value=2.9e-07 Score=92.55 Aligned_cols=111 Identities=16% Similarity=0.097 Sum_probs=74.9
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccc--ccccccccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNH--IDLIANETIEI 433 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~--v~~i~~d~~~~ 433 (511)
++.....+...+.. +.++.+|||+|||+|.+++.+|+.. .+|+++|+++++++.+++|...++ ++++.+|..+.
T Consensus 274 n~~~~e~l~~~~~~-~~~~~~VLDlgcG~G~~sl~la~~~---~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~ 349 (425)
T 2jjq_A 274 NSYQAVNLVRKVSE-LVEGEKILDMYSGVGTFGIYLAKRG---FNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREV 349 (425)
T ss_dssp BHHHHHHHHHHHHH-HCCSSEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTC
T ss_pred CHHHHHHHHHHhhc-cCCCCEEEEeeccchHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHc
Confidence 33444444444222 5788999999999999999999864 799999999999998888775433 77888887766
Q ss_pred ccccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 434 IPHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 434 l~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
++..+|.++.+.+. .|...........++|+|.++..
T Consensus 350 ~~~~fD~Vv~dPPr--------~g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 350 SVKGFDTVIVDPPR--------AGLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp CCTTCSEEEECCCT--------TCSCHHHHHHHHHHCCSEEEEEE
T ss_pred CccCCCEEEEcCCc--------cchHHHHHHHHHhcCCCcEEEEE
Confidence 54445555443321 13333233333457898877655
No 431
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.49 E-value=2.1e-07 Score=89.38 Aligned_cols=89 Identities=15% Similarity=0.197 Sum_probs=63.0
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---cccccccccccccccccccchhhhhcc
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---STNHIDLIANETIEIIPHILDLCYLNL 445 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---~~~~v~~i~~d~~~~l~~~~d~i~~~l 445 (511)
+.+.+|++|||+|||+|..|+.+|+.+++.++|+++|+++++++.+++|+ +..|++++.+|..+....... .-
T Consensus 98 l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~----~~ 173 (309)
T 2b9e_A 98 LDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPR----YH 173 (309)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGG----GT
T ss_pred hCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccc----cC
Confidence 57789999999999999999999998866799999999988877766654 566788888886554321100 01
Q ss_pred cCCcEEEEEcC-CccHH
Q psy7829 446 HRGAKVLEIGS-GSGYL 461 (511)
Q Consensus 446 ~~~~~vLD~~~-g~g~~ 461 (511)
..+..++|..| |+|.+
T Consensus 174 ~fD~Vl~D~PcSg~G~~ 190 (309)
T 2b9e_A 174 EVHYILLDPSCSGSGMP 190 (309)
T ss_dssp TEEEEEECCCCCC----
T ss_pred CCCEEEEcCCcCCCCCC
Confidence 22345677777 66654
No 432
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.49 E-value=5.5e-08 Score=91.22 Aligned_cols=72 Identities=15% Similarity=0.138 Sum_probs=55.4
Q ss_pred CCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cc-ccccccccccc----ccc----ccchh
Q psy7829 373 RGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TN-HIDLIANETIE----IIP----HILDL 440 (511)
Q Consensus 373 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~-~v~~i~~d~~~----~l~----~~~d~ 440 (511)
++.+|||+|||+|.+++.+++.. +..+|+++|+++++++.+++++. .. +++++++|..+ .++ ..+|.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 57899999999999999999876 44899999999999988887764 33 37888877433 232 35777
Q ss_pred hhhcc
Q psy7829 441 CYLNL 445 (511)
Q Consensus 441 i~~~l 445 (511)
++.+.
T Consensus 144 i~~np 148 (254)
T 2h00_A 144 CMCNP 148 (254)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77763
No 433
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.49 E-value=1.9e-07 Score=88.34 Aligned_cols=104 Identities=12% Similarity=0.174 Sum_probs=64.1
Q ss_pred HHHHHHHhhcCCC-CCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc------cccccccccccccc
Q psy7829 360 IAHILDLCYLNLH-RGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI------STNHIDLIANETIE 432 (511)
Q Consensus 360 ~~~~~~~~~~~~~-~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~------~~~~v~~i~~d~~~ 432 (511)
...++.. +.+. ++.+|||||||||+++..+++.. . ++|+|+|++++|+..+.++. +..|+..+..+.
T Consensus 73 l~~~l~~--~~~~~~g~~vLDiGcGTG~~t~~L~~~g-a-~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~-- 146 (291)
T 3hp7_A 73 LEKALAV--FNLSVEDMITIDIGASTGGFTDVMLQNG-A-KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVD-- 146 (291)
T ss_dssp HHHHHHH--TTCCCTTCEEEEETCTTSHHHHHHHHTT-C-SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGG--
T ss_pred HHHHHHh--cCCCccccEEEecCCCccHHHHHHHhCC-C-CEEEEEECCHHHHHHHHHhCcccceecccCceecchhh--
Confidence 4455665 5554 57899999999999999998763 2 79999999988777644321 122333332211
Q ss_pred cccc-cchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 433 IIPH-ILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 433 ~l~~-~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
++. .+|.+..+.... ....+...+++.|+|+|+++.+
T Consensus 147 -l~~~~fD~v~~d~sf~--------sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 147 -FTEGLPSFASIDVSFI--------SLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp -CTTCCCSEEEECCSSS--------CGGGTHHHHHHHSCTTCEEEEE
T ss_pred -CCCCCCCEEEEEeeHh--------hHHHHHHHHHHHcCcCCEEEEE
Confidence 111 133332222111 2345567888889999988765
No 434
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.48 E-value=1.6e-07 Score=90.31 Aligned_cols=108 Identities=16% Similarity=0.096 Sum_probs=74.8
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-------ccccccccccccccc---cccc
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-------TNHIDLIANETIEII---PHIL 438 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-------~~~v~~i~~d~~~~l---~~~~ 438 (511)
+....+.+|||||||+|.++..+++.. +..+|+++|+++++++.+++++. .++++++.+|+.+.+ +..+
T Consensus 91 ~~~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~f 169 (304)
T 2o07_A 91 CSHPNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAF 169 (304)
T ss_dssp TTSSSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCE
T ss_pred hhCCCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCc
Confidence 344577899999999999999998764 55899999999999998887764 356888888876644 3456
Q ss_pred hhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 439 DLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 439 d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
|.++.+....... ...--+-.+...+.+.|+|+|.++..
T Consensus 170 D~Ii~d~~~~~~~-~~~l~~~~~l~~~~~~LkpgG~lv~~ 208 (304)
T 2o07_A 170 DVIITDSSDPMGP-AESLFKESYYQLMKTALKEDGVLCCQ 208 (304)
T ss_dssp EEEEEECC------------CHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCCCCCCc-chhhhHHHHHHHHHhccCCCeEEEEe
Confidence 7766654321100 00001234566778899999988753
No 435
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.48 E-value=1.6e-07 Score=91.21 Aligned_cols=103 Identities=17% Similarity=0.175 Sum_probs=75.4
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-------cccccccccccccccc----cc
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-------TNHIDLIANETIEIIP----HI 437 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-------~~~v~~i~~d~~~~l~----~~ 437 (511)
+....+.+|||||||+|.++..+++.. +..+|+++|+++++++.+++++. .++++++.+|..+.++ ..
T Consensus 116 ~~~~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~ 194 (334)
T 1xj5_A 116 CSIPNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGS 194 (334)
T ss_dssp TTSSCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTC
T ss_pred hhCCCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCC
Confidence 445677899999999999999999764 55899999999999998888764 3578899998766532 34
Q ss_pred chhhhhcccCCcEEEEEcCC----ccHHHHHHHHHhCCCcEEEE
Q psy7829 438 LDLCYLNLHRGAKVLEIGSG----SGYLATLMAHLVGPTGHVTG 477 (511)
Q Consensus 438 ~d~i~~~l~~~~~vLD~~~g----~g~~~~~l~~~l~~~g~v~~ 477 (511)
+|.++.+..... +.. +-.+...+.+.|+|+|.++.
T Consensus 195 fDlIi~d~~~p~-----~~~~~l~~~~~l~~~~~~LkpgG~lv~ 233 (334)
T 1xj5_A 195 YDAVIVDSSDPI-----GPAKELFEKPFFQSVARALRPGGVVCT 233 (334)
T ss_dssp EEEEEECCCCTT-----SGGGGGGSHHHHHHHHHHEEEEEEEEE
T ss_pred ccEEEECCCCcc-----CcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 666665432111 000 23456677888999999887
No 436
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.48 E-value=2.2e-07 Score=92.22 Aligned_cols=120 Identities=18% Similarity=0.176 Sum_probs=80.9
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----cccccccc
Q psy7829 353 GPSSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NHIDLIAN 428 (511)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~v~~i~~ 428 (511)
.|..+..++.++.+ . ..++.+|||+|||+|.+++.+|+.. +.++|+|+|+++.+++.+++|+.. .+++++++
T Consensus 200 a~l~~~la~~l~~~--~-~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~ 275 (373)
T 3tm4_A 200 AHLKASIANAMIEL--A-ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQG 275 (373)
T ss_dssp TCCCHHHHHHHHHH--H-TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEEC
T ss_pred CCccHHHHHHHHHh--h-cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 35567777777776 4 7889999999999999999999875 456999999999999988887653 46788888
Q ss_pred ccccccc--ccchhhhhcccCCcEEEEEcCC---ccHHHHHHHHHhCCCcEEEEh
Q psy7829 429 ETIEIIP--HILDLCYLNLHRGAKVLEIGSG---SGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 429 d~~~~l~--~~~d~i~~~l~~~~~vLD~~~g---~g~~~~~l~~~l~~~g~v~~~ 478 (511)
|..+... ..+|.++.+.+-+.++-+...- -..+...+.+.+ +|.++.+
T Consensus 276 D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i 328 (373)
T 3tm4_A 276 DATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFI 328 (373)
T ss_dssp CGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEE
T ss_pred ChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEE
Confidence 8766432 4577777776655443211100 022344555666 4555444
No 437
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.48 E-value=1.3e-07 Score=89.52 Aligned_cols=119 Identities=11% Similarity=0.087 Sum_probs=82.2
Q ss_pred CCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-------ccccccccccccccc---cccchhh
Q psy7829 372 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-------TNHIDLIANETIEII---PHILDLC 441 (511)
Q Consensus 372 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-------~~~v~~i~~d~~~~l---~~~~d~i 441 (511)
..+.+|||||||+|.++..+++.. +..+|+++|+++++++.+++++. .++++++.+|+.+.+ +..+|.+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 467899999999999999998764 34799999999999999888762 357899999877654 3457777
Q ss_pred hhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh-------HHHHHHHHHHHHhc
Q psy7829 442 YLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL-------EHMMDIAIESIANI 492 (511)
Q Consensus 442 ~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~-------~~ml~~a~~~~~~~ 492 (511)
+.+....... .-.--+-.+...+.+.|+|+|.++.. ...+....+.+++.
T Consensus 153 i~d~~~~~~~-~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 209 (275)
T 1iy9_A 153 MVDSTEPVGP-AVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI 209 (275)
T ss_dssp EESCSSCCSC-CCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT
T ss_pred EECCCCCCCc-chhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh
Confidence 6654332100 00001245667888999999988764 33344444455443
No 438
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.47 E-value=9.3e-08 Score=88.56 Aligned_cols=103 Identities=14% Similarity=0.073 Sum_probs=69.9
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc--cccccccccccccc----cccchhhhh
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST--NHIDLIANETIEII----PHILDLCYL 443 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~--~~v~~i~~d~~~~l----~~~~d~i~~ 443 (511)
...++.+|||||||+|..+..+++.. + .+|+++|+++++++.++++... .+++++.+|..+.. +..+|.++.
T Consensus 57 ~~~~~~~vLDiGcGtG~~~~~l~~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 134 (236)
T 1zx0_A 57 ASSKGGRVLEVGFGMAIAASKVQEAP-I-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp HTTTCEEEEEECCTTSHHHHHHHTSC-E-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred cCCCCCeEEEEeccCCHHHHHHHhcC-C-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEE
Confidence 35678999999999999999997543 2 5899999999999998887653 56788888765432 234555544
Q ss_pred cccCCcEEEEEcC-Ccc---HHHHHHHHHhCCCcEEEEh
Q psy7829 444 NLHRGAKVLEIGS-GSG---YLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 444 ~l~~~~~vLD~~~-g~g---~~~~~l~~~l~~~g~v~~~ 478 (511)
+... +.+.. ... .+...+.+.|+|+|.++.+
T Consensus 135 d~~~----~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 135 DTYP----LSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCC----CBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred CCcc----cchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 1000 00000 011 2356678899999998866
No 439
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.47 E-value=1.9e-07 Score=85.61 Aligned_cols=98 Identities=18% Similarity=0.163 Sum_probs=68.2
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccccccccccccccc-----cc-ccchhhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEI-----IP-HILDLCY 442 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~-----l~-~~~d~i~ 442 (511)
+...++.+|||+|||+|.++..+++.. .+|+++|+++.+++.++++ .++.++..+.... .+ ..+|.++
T Consensus 48 ~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~fD~v~ 121 (227)
T 3e8s_A 48 ILGRQPERVLDLGCGEGWLLRALADRG---IEAVGVDGDRTLVDAARAA---GAGEVHLASYAQLAEAKVPVGKDYDLIC 121 (227)
T ss_dssp HHHTCCSEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHT---CSSCEEECCHHHHHTTCSCCCCCEEEEE
T ss_pred hhcCCCCEEEEeCCCCCHHHHHHHHCC---CEEEEEcCCHHHHHHHHHh---cccccchhhHHhhcccccccCCCccEEE
Confidence 444567999999999999999998763 7999999999999998887 4455555543332 11 2255444
Q ss_pred hcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 443 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 443 ~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.... +. ......+...+.+.|+|+|.++..
T Consensus 122 ~~~~-----l~-~~~~~~~l~~~~~~L~pgG~l~~~ 151 (227)
T 3e8s_A 122 ANFA-----LL-HQDIIELLSAMRTLLVPGGALVIQ 151 (227)
T ss_dssp EESC-----CC-SSCCHHHHHHHHHTEEEEEEEEEE
T ss_pred ECch-----hh-hhhHHHHHHHHHHHhCCCeEEEEE
Confidence 3211 11 234456677888899999988765
No 440
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.46 E-value=2.3e-07 Score=86.42 Aligned_cols=73 Identities=18% Similarity=0.230 Sum_probs=59.2
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-cccccccccccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-TNHIDLIANETIEI 433 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-~~~v~~i~~d~~~~ 433 (511)
.+..+.+++.. +.+.++++|||||||+|.+|. ++ .. ...+|+++|++++++..+++++. .++++++++|..+.
T Consensus 6 d~~i~~~iv~~--~~~~~~~~VLEIG~G~G~lt~-l~-~~-~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 6 DQFVIDSIVSA--INPQKGQAMVEIGPGLAALTE-PV-GE-RLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTF 79 (252)
T ss_dssp CHHHHHHHHHH--HCCCTTCCEEEECCTTTTTHH-HH-HT-TCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGC
T ss_pred CHHHHHHHHHh--cCCCCcCEEEEECCCCcHHHH-hh-hC-CCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhC
Confidence 45677788887 678899999999999999999 65 33 22339999999999999988875 35799999987663
No 441
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.46 E-value=3.9e-07 Score=90.40 Aligned_cols=110 Identities=6% Similarity=0.010 Sum_probs=73.7
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---ccccccccccccccc
Q psy7829 358 RSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETIEII 434 (511)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~~~l 434 (511)
..+..++........++.+|||+| |+|.+++.+++.. +.++|+++|+++++++.+++|+. ..+++++.+|..+.+
T Consensus 157 ~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~~-~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l 234 (373)
T 2qm3_A 157 TTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLSG-LPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPL 234 (373)
T ss_dssp HHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHHT-CCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCC
T ss_pred HHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhc
Confidence 334444433222334689999999 9999999998764 66899999999998888777754 447889999876644
Q ss_pred c----ccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEE
Q psy7829 435 P----HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHV 475 (511)
Q Consensus 435 ~----~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v 475 (511)
+ ..+|.++.+..-+.. +.-.+...+.+.++|+|++
T Consensus 235 ~~~~~~~fD~Vi~~~p~~~~------~~~~~l~~~~~~LkpgG~~ 273 (373)
T 2qm3_A 235 PDYALHKFDTFITDPPETLE------AIRAFVGRGIATLKGPRCA 273 (373)
T ss_dssp CTTTSSCBSEEEECCCSSHH------HHHHHHHHHHHTBCSTTCE
T ss_pred hhhccCCccEEEECCCCchH------HHHHHHHHHHHHcccCCeE
Confidence 3 246665554322111 1123445667788999954
No 442
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.45 E-value=2.1e-07 Score=90.10 Aligned_cols=115 Identities=10% Similarity=0.143 Sum_probs=79.9
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc-------cccccccccccccc---cccchh
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST-------NHIDLIANETIEII---PHILDL 440 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~-------~~v~~i~~d~~~~l---~~~~d~ 440 (511)
...+.+|||||||+|..+..+++.. +..+|+++|+++++++.+++++.. ++++++.+|..+.+ +..+|.
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDv 192 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDV 192 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceE
Confidence 3567899999999999999998764 458999999999999998887653 56888888876544 345666
Q ss_pred hhhcccCCcEEEEEcCC----ccHHHHHHHHHhCCCcEEEEh-------HHHHHHHHHHHHh
Q psy7829 441 CYLNLHRGAKVLEIGSG----SGYLATLMAHLVGPTGHVTGL-------EHMMDIAIESIAN 491 (511)
Q Consensus 441 i~~~l~~~~~vLD~~~g----~g~~~~~l~~~l~~~g~v~~~-------~~ml~~a~~~~~~ 491 (511)
++.+..... +.. +-.+...+.+.|+|+|.++.. ...+....+.+++
T Consensus 193 Ii~d~~~p~-----~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 249 (321)
T 2pt6_A 193 IIVDSSDPI-----GPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKK 249 (321)
T ss_dssp EEEECCCSS-----SGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHT
T ss_pred EEECCcCCC-----CcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHH
Confidence 665432110 100 134556777889999998763 2344444445444
No 443
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.45 E-value=6.4e-08 Score=91.21 Aligned_cols=103 Identities=17% Similarity=0.123 Sum_probs=67.2
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccccccccccccc-cccchhhhhcccCC
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEII-PHILDLCYLNLHRG 448 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~l-~~~~d~i~~~l~~~ 448 (511)
..+++.+|||+|||+|.++..+++.. .+|+++|+++++++.++++.. +++++.+|..+.. +..+|.++.....-
T Consensus 47 ~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~--~~~~~~~d~~~~~~~~~fD~v~~~~~~l 121 (263)
T 3pfg_A 47 HSPKAASLLDVACGTGMHLRHLADSF---GTVEGLELSADMLAIARRRNP--DAVLHHGDMRDFSLGRRFSAVTCMFSSI 121 (263)
T ss_dssp HCTTCCEEEEETCTTSHHHHHHTTTS---SEEEEEESCHHHHHHHHHHCT--TSEEEECCTTTCCCSCCEEEEEECTTGG
T ss_pred hCCCCCcEEEeCCcCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCC--CCEEEECChHHCCccCCcCEEEEcCchh
Confidence 34677999999999999999998764 689999999999999888765 6788877754422 23344332211000
Q ss_pred cEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 449 AKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 449 ~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
..+.+ ......+...+.+.|+|+|.++..
T Consensus 122 ~~~~~-~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 122 GHLAG-QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp GGSCH-HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred hhcCC-HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 00000 000112355677888999998774
No 444
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.45 E-value=5.2e-07 Score=84.88 Aligned_cols=102 Identities=14% Similarity=0.165 Sum_probs=78.5
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhC----CCceEEEEeCCHH--------------------------HHHHHHHHHhcc
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMVG----PTGKVIGVEHIPE--------------------------LIEASLRNISKG 181 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~~----~~~~v~~iD~~~~--------------------------~~~~a~~~~~~~ 181 (511)
....+|||+|+..|+.++.++..+. ++.+|+++|..+. .++.+++++++.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 3466899999999999999987653 3688999996421 467789999987
Q ss_pred CCCcCCCCCeEEEEccCCCCCC--CCCCccEEEecCCCC----chHHHHHhhcccCcEEEE
Q psy7829 182 NKDLLDSGRVRIVEADAREGYL--PEAPYDVIYYGGCVS----EVPSRVLNQLKKGGRILA 236 (511)
Q Consensus 182 ~~~~~~~~~v~~~~~d~~~~~~--~~~~fD~I~~~~~~~----~~~~~~~~~LkpgG~l~~ 236 (511)
| +..++|+++.+|+.+..+ +.++||+|+++.... ..++.+...|+|||.+++
T Consensus 185 g---l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 185 D---LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp T---CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred C---CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEEE
Confidence 6 123789999999875332 236899999998752 124678899999999987
No 445
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.44 E-value=1.7e-07 Score=90.17 Aligned_cols=112 Identities=13% Similarity=0.098 Sum_probs=74.7
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc------ccccccccc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST------NHIDLIANE 429 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~------~~v~~i~~d 429 (511)
.......++.. +... +.+|||||||+|.++..+++.. .+|+++|+++.+++.++++... .+++++++|
T Consensus 68 ~~~~~~~~~~~--~~~~-~~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d 141 (299)
T 3g2m_A 68 GTSEAREFATR--TGPV-SGPVLELAAGMGRLTFPFLDLG---WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGD 141 (299)
T ss_dssp CHHHHHHHHHH--HCCC-CSCEEEETCTTTTTHHHHHTTT---CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECB
T ss_pred ccHHHHHHHHh--hCCC-CCcEEEEeccCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCc
Confidence 45666666665 4443 4499999999999999998763 7899999999999998887764 568888887
Q ss_pred ccccc-cccchhhhhcccCCcEEEEEcCC---ccHHHHHHHHHhCCCcEEEEh
Q psy7829 430 TIEII-PHILDLCYLNLHRGAKVLEIGSG---SGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 430 ~~~~l-~~~~d~i~~~l~~~~~vLD~~~g---~g~~~~~l~~~l~~~g~v~~~ 478 (511)
..+.. +..+|.++.... ++.. .. ...+...+.+.|+|+|.++..
T Consensus 142 ~~~~~~~~~fD~v~~~~~----~~~~-~~~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 142 MSAFALDKRFGTVVISSG----SINE-LDEADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp TTBCCCSCCEEEEEECHH----HHTT-SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCCcCCCcCEEEECCc----cccc-CCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 65432 233443221000 0000 01 134456778889999998766
No 446
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.44 E-value=3.4e-07 Score=82.36 Aligned_cols=87 Identities=23% Similarity=0.246 Sum_probs=65.4
Q ss_pred CCHHHHHHHHHHhh-cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccccccccccccccc
Q psy7829 355 SSERSIAHILDLCY-LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEI 433 (511)
Q Consensus 355 ~~~~~~~~~~~~~~-~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~ 433 (511)
.++.....++..+. ....++.+|||+|||+|.++..+++. + ..+|+++|+++++++.++++.. +++++++|..+
T Consensus 32 ~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~--~~~~~~~d~~~- 106 (200)
T 1ne2_A 32 TDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLL-G-AESVTAFDIDPDAIETAKRNCG--GVNFMVADVSE- 106 (200)
T ss_dssp CCHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHT-T-BSEEEEEESCHHHHHHHHHHCT--TSEEEECCGGG-
T ss_pred CCHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHhcC--CCEEEECcHHH-
Confidence 34555555555422 23557899999999999999999876 2 2589999999999999998886 78888888766
Q ss_pred ccccchhhhhccc
Q psy7829 434 IPHILDLCYLNLH 446 (511)
Q Consensus 434 l~~~~d~i~~~l~ 446 (511)
++..+|.++.+..
T Consensus 107 ~~~~~D~v~~~~p 119 (200)
T 1ne2_A 107 ISGKYDTWIMNPP 119 (200)
T ss_dssp CCCCEEEEEECCC
T ss_pred CCCCeeEEEECCC
Confidence 3456777766543
No 447
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.44 E-value=1.9e-07 Score=89.96 Aligned_cols=106 Identities=14% Similarity=0.080 Sum_probs=73.5
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-------ccccccccccccccc---cccchh
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-------TNHIDLIANETIEII---PHILDL 440 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-------~~~v~~i~~d~~~~l---~~~~d~ 440 (511)
...+.+|||||||+|..+..+++.. +..+|+++|+++++++.+++++. .++++++.+|+.+.+ +..+|.
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~ 184 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDV 184 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceE
Confidence 3567899999999999999998764 55899999999999999888774 356888888876654 345777
Q ss_pred hhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 441 CYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 441 i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
++.+..... ..+-.--+-.+...+.+.|+|+|.++..
T Consensus 185 Ii~d~~~~~-~~~~~l~t~~~l~~~~~~LkpgG~lv~~ 221 (314)
T 2b2c_A 185 IITDSSDPV-GPAESLFGQSYYELLRDALKEDGILSSQ 221 (314)
T ss_dssp EEECCC--------------HHHHHHHHEEEEEEEEEE
T ss_pred EEEcCCCCC-CcchhhhHHHHHHHHHhhcCCCeEEEEE
Confidence 766543210 0000000134556778889999998863
No 448
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.44 E-value=7.5e-08 Score=92.94 Aligned_cols=105 Identities=13% Similarity=0.036 Sum_probs=71.9
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----cccccccccccccc-cccchhhhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NHIDLIANETIEII-PHILDLCYL 443 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~v~~i~~d~~~~l-~~~~d~i~~ 443 (511)
..+.++.+|||||||+|..+..+|....+..+|+++|+++.+++.++++... ++++++.+|..+.. +..+|.++.
T Consensus 114 ~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~ 193 (305)
T 3ocj_A 114 RHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTS 193 (305)
T ss_dssp HHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEEC
T ss_pred hhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEE
Confidence 4678899999999999999999864344678999999999999988887763 34778888765532 234444433
Q ss_pred cccCCcEEEEEcCCccH---HHHHHHHHhCCCcEEEEh
Q psy7829 444 NLHRGAKVLEIGSGSGY---LATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 444 ~l~~~~~vLD~~~g~g~---~~~~l~~~l~~~g~v~~~ 478 (511)
+..-. .-..... +...+.+.|+|||.++..
T Consensus 194 ~~~~~-----~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 226 (305)
T 3ocj_A 194 NGLNI-----YEPDDARVTELYRRFWQALKPGGALVTS 226 (305)
T ss_dssp CSSGG-----GCCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CChhh-----hcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 21000 0001222 356778889999998843
No 449
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.44 E-value=5.7e-07 Score=85.57 Aligned_cols=104 Identities=11% Similarity=0.156 Sum_probs=74.4
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-------ccccccccccccccc---cccc
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-------TNHIDLIANETIEII---PHIL 438 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-------~~~v~~i~~d~~~~l---~~~~ 438 (511)
+...++.+|||||||+|..+..+++.. +..+|+++|+++++++.+++++. .++++++.+|..+.+ +..+
T Consensus 74 ~~~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~f 152 (283)
T 2i7c_A 74 TVSKEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTY 152 (283)
T ss_dssp TTSSSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCE
T ss_pred hcCCCCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCc
Confidence 344577899999999999999998764 55899999999999999888775 356888888876544 2345
Q ss_pred hhhhhcccCCcEEEEEcCC----ccHHHHHHHHHhCCCcEEEEh
Q psy7829 439 DLCYLNLHRGAKVLEIGSG----SGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 439 d~i~~~l~~~~~vLD~~~g----~g~~~~~l~~~l~~~g~v~~~ 478 (511)
|.++.+..... +.. +-.+...+.+.|+|+|.++..
T Consensus 153 D~Ii~d~~~~~-----~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 153 DVIIVDSSDPI-----GPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp EEEEEECCCTT-----TGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEcCCCCC-----CcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 65554332110 101 124566778889999998754
No 450
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.44 E-value=4.9e-07 Score=85.75 Aligned_cols=90 Identities=18% Similarity=0.221 Sum_probs=71.9
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEc
Q psy7829 117 PNQIADAAENLKLHLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEA 196 (511)
Q Consensus 117 p~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 196 (511)
|.+...+++.|. +++|..++|..||.|..+..+++.+++.++|+|+|.++.+++.++ ++ ..++++++++
T Consensus 43 pVLl~Evl~~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--------~~~Rv~lv~~ 111 (347)
T 3tka_A 43 TVLLDEAVNGLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--------DDPRFSIIHG 111 (347)
T ss_dssp CTTTHHHHHHTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--------CCTTEEEEES
T ss_pred cccHHHHHHhhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--------cCCcEEEEeC
Confidence 336677788886 789999999999999999999999888999999999999999884 33 2358999999
Q ss_pred cCCCCC---CC---CCCccEEEecCCC
Q psy7829 197 DAREGY---LP---EAPYDVIYYGGCV 217 (511)
Q Consensus 197 d~~~~~---~~---~~~fD~I~~~~~~ 217 (511)
++.+.. .. .+++|.|+.+..+
T Consensus 112 nF~~l~~~L~~~g~~~~vDgILfDLGV 138 (347)
T 3tka_A 112 PFSALGEYVAERDLIGKIDGILLDLGV 138 (347)
T ss_dssp CGGGHHHHHHHTTCTTCEEEEEEECSC
T ss_pred CHHHHHHHHHhcCCCCcccEEEECCcc
Confidence 876421 11 1369999988655
No 451
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.43 E-value=1.5e-07 Score=84.38 Aligned_cols=104 Identities=15% Similarity=0.099 Sum_probs=67.9
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---ccccccccccccccc-cccchhhhhc
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETIEII-PHILDLCYLN 444 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~~~l-~~~~d~i~~~ 444 (511)
+...++.+|||+|||+|..+..+++. + .+|+++|+++.+++.++++.. .++++++.+|..... +..+|.++..
T Consensus 28 ~~~~~~~~vLdiG~G~G~~~~~l~~~-~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~ 104 (199)
T 2xvm_A 28 VKVVKPGKTLDLGCGNGRNSLYLAAN-G--YDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILST 104 (199)
T ss_dssp TTTSCSCEEEEETCTTSHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEEEEEEE
T ss_pred hhccCCCeEEEEcCCCCHHHHHHHHC-C--CeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCceEEEEc
Confidence 45567889999999999999999876 3 799999999988888777654 346777777654321 2334443322
Q ss_pred ccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 445 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 445 l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
..-.. ++ .-....+...+.+.++|+|.++.+
T Consensus 105 ~~l~~--~~-~~~~~~~l~~~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 105 VVLMF--LE-AKTIPGLIANMQRCTKPGGYNLIV 135 (199)
T ss_dssp SCGGG--SC-GGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred chhhh--CC-HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 10000 00 001233456677888999987654
No 452
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.43 E-value=1.3e-07 Score=88.67 Aligned_cols=95 Identities=12% Similarity=-0.025 Sum_probs=72.6
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-------ccccccccccccccccccchhhh
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-------TNHIDLIANETIEIIPHILDLCY 442 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-------~~~v~~i~~d~~~~l~~~~d~i~ 442 (511)
....+.+|||||||+|+++..+++. + .+|+++|+++++++.+++++. .++++++.+|+.+.+ ..+|.++
T Consensus 69 ~~~~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~-~~fD~Ii 144 (262)
T 2cmg_A 69 TKKELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI-KKYDLIF 144 (262)
T ss_dssp TSSCCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-CCEEEEE
T ss_pred cCCCCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-hhCCEEE
Confidence 3346789999999999999998876 3 899999999999998887764 346888888887766 5567666
Q ss_pred hcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 443 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 443 ~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+.. .+-.+...+.+.|+|+|.++..
T Consensus 145 ~d~~----------dp~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 145 CLQE----------PDIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp ESSC----------CCHHHHHHHHTTEEEEEEEEEE
T ss_pred ECCC----------ChHHHHHHHHHhcCCCcEEEEE
Confidence 5432 1222567788889999988764
No 453
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.43 E-value=4.3e-07 Score=82.11 Aligned_cols=131 Identities=15% Similarity=0.098 Sum_probs=81.6
Q ss_pred CCHHHHHHHHHHhh-cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccc--cccccccccc
Q psy7829 355 SSERSIAHILDLCY-LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTN--HIDLIANETI 431 (511)
Q Consensus 355 ~~~~~~~~~~~~~~-~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~--~v~~i~~d~~ 431 (511)
..+.....++..+. ....++.+|||+|||+|.++..+++.. . .+|+++|+++.+++.++++.... +++++.+|..
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~-~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~ 107 (207)
T 1wy7_A 30 TPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLG-A-KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVS 107 (207)
T ss_dssp CCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTT-C-SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGG
T ss_pred CchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcC-C-CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchH
Confidence 34555555554421 235578999999999999999998763 2 58999999999999888877643 5788888876
Q ss_pred ccccccchhhhhcccCCcEEEEEcCCc-cHHHHHHHHHhCCCcEEEEh---HHHHHHHHHHHHhcCC
Q psy7829 432 EIIPHILDLCYLNLHRGAKVLEIGSGS-GYLATLMAHLVGPTGHVTGL---EHMMDIAIESIANIST 494 (511)
Q Consensus 432 ~~l~~~~d~i~~~l~~~~~vLD~~~g~-g~~~~~l~~~l~~~g~v~~~---~~ml~~a~~~~~~~~~ 494 (511)
+ ++..+|.++.+.+-+.. ..+. -.+...+.+.+ ++-++.. +...+...+.+.+.|.
T Consensus 108 ~-~~~~~D~v~~~~p~~~~----~~~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~ 167 (207)
T 1wy7_A 108 E-FNSRVDIVIMNPPFGSQ----RKHADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGF 167 (207)
T ss_dssp G-CCCCCSEEEECCCCSSS----STTTTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTE
T ss_pred H-cCCCCCEEEEcCCCccc----cCCchHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCC
Confidence 6 34456666655432110 0011 12334444554 3332222 4555666666666664
No 454
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.43 E-value=4.7e-07 Score=83.63 Aligned_cols=108 Identities=21% Similarity=0.278 Sum_probs=70.7
Q ss_pred HHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----ccccccccccccccc-c
Q psy7829 362 HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NHIDLIANETIEIIP-H 436 (511)
Q Consensus 362 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~v~~i~~d~~~~l~-~ 436 (511)
.++.. ..+++ .+|||+|||+|..+..+++. ..+|+++|+++.+++.++++... .+++++.+|..+..+ .
T Consensus 58 ~~~~~--~~~~~-~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 131 (235)
T 3lcc_A 58 HLVDT--SSLPL-GRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTE 131 (235)
T ss_dssp HHHHT--TCSCC-EEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSS
T ss_pred HHHHh--cCCCC-CCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCC
Confidence 44443 34444 59999999999999998753 38999999999999988887753 458888887655332 2
Q ss_pred cchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 437 ILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 437 ~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+|.++....-.. ++ ......+...+.+.|+|+|.++.+
T Consensus 132 ~fD~v~~~~~l~~--~~-~~~~~~~l~~~~~~LkpgG~l~~~ 170 (235)
T 3lcc_A 132 LFDLIFDYVFFCA--IE-PEMRPAWAKSMYELLKPDGELITL 170 (235)
T ss_dssp CEEEEEEESSTTT--SC-GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEEChhhhc--CC-HHHHHHHHHHHHHHCCCCcEEEEE
Confidence 3444332110000 00 001234556778889999998864
No 455
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.43 E-value=3.3e-08 Score=97.08 Aligned_cols=116 Identities=18% Similarity=0.185 Sum_probs=76.7
Q ss_pred HHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccc--cccccccccccccc
Q psy7829 359 SIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNH--IDLIANETIEIIPH 436 (511)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~--v~~i~~d~~~~l~~ 436 (511)
....++.. +...++.+|||+|||+|.++..+++.. |..+|+++|+++.+++.+++++...+ ++++.+|..+..+.
T Consensus 184 ~~~~ll~~--l~~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~ 260 (343)
T 2pjd_A 184 GSQLLLST--LTPHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKG 260 (343)
T ss_dssp HHHHHHHH--SCTTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCS
T ss_pred HHHHHHHh--cCcCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccC
Confidence 34455555 555567899999999999999999886 66799999999999998888775433 44566666554455
Q ss_pred cchhhhhcccCCcEEEEEc-CCccHHHHHHHHHhCCCcEEEEh
Q psy7829 437 ILDLCYLNLHRGAKVLEIG-SGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 437 ~~d~i~~~l~~~~~vLD~~-~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+|.++.+..-..-.. .. ...-.+...+.+.|+|+|.++.+
T Consensus 261 ~fD~Iv~~~~~~~g~~-~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 261 RFDMIISNPPFHDGMQ-TSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp CEEEEEECCCCCSSSH-HHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CeeEEEECCCcccCcc-CCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 5666555432110000 00 00122345566788999998876
No 456
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.42 E-value=2.4e-07 Score=83.43 Aligned_cols=98 Identities=15% Similarity=0.079 Sum_probs=65.7
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc--cccccccccccccc--cccchhhhhccc
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST--NHIDLIANETIEII--PHILDLCYLNLH 446 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~--~~v~~i~~d~~~~l--~~~~d~i~~~l~ 446 (511)
++++ +|||+|||+|.++..+++.. .+|+++|+++.+++.++++... .++.++.+|..+.. +..+|.++....
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 103 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASLG---YEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFC 103 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTTT---CEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECC
T ss_pred CCCC-CEEEECCCCCHhHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhh
Confidence 3566 99999999999999998753 7999999999999888777642 26777777654431 233454443210
Q ss_pred CCcEEEEEc-CCccHHHHHHHHHhCCCcEEEEh
Q psy7829 447 RGAKVLEIG-SGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 447 ~~~~vLD~~-~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+. .....+...+.+.++|+|.++..
T Consensus 104 ------~~~~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 104 ------HLPSSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp ------CCCHHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred ------cCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 000 01223455667788999998776
No 457
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.41 E-value=7.7e-07 Score=80.13 Aligned_cols=96 Identities=15% Similarity=0.120 Sum_probs=67.9
Q ss_pred CCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccccccccccccc--cccchhhhhcccCCcEE
Q psy7829 374 GAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEII--PHILDLCYLNLHRGAKV 451 (511)
Q Consensus 374 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~l--~~~~d~i~~~l~~~~~v 451 (511)
+.+|||+|||+|.++..+++.. .+|+++|+++++++.++++. ++++++.+|..+.. +..+|.++....-..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-- 114 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG---HQIEGLEPATRLVELARQTH--PSVTFHHGTITDLSDSPKRWAGLLAWYSLIH-- 114 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT---CCEEEECCCHHHHHHHHHHC--TTSEEECCCGGGGGGSCCCEEEEEEESSSTT--
T ss_pred CCeEEEecCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhC--CCCeEEeCcccccccCCCCeEEEEehhhHhc--
Confidence 8899999999999999998763 69999999999999988874 46888877754421 234454443211000
Q ss_pred EEEc-CCccHHHHHHHHHhCCCcEEEEh
Q psy7829 452 LEIG-SGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 452 LD~~-~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
+. -....+...+.+.|+|+|.++..
T Consensus 115 --~~~~~~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 115 --MGPGELPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp --CCTTTHHHHHHHHHHTEEEEEEEEEE
T ss_pred --CCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 00 13345667788889999998764
No 458
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.40 E-value=2.5e-07 Score=86.54 Aligned_cols=109 Identities=14% Similarity=0.118 Sum_probs=72.4
Q ss_pred HHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc-cccccccccccccc--cccc
Q psy7829 362 HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST-NHIDLIANETIEII--PHIL 438 (511)
Q Consensus 362 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~-~~v~~i~~d~~~~l--~~~~ 438 (511)
.++.. +...++.+|||||||+|.++..+++... .+|+++|+++.+++.++++... .+++++.+|..... +..+
T Consensus 84 ~~l~~--l~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~f 159 (254)
T 1xtp_A 84 NFIAS--LPGHGTSRALDCGAGIGRITKNLLTKLY--ATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTY 159 (254)
T ss_dssp HHHHT--STTCCCSEEEEETCTTTHHHHHTHHHHC--SEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCE
T ss_pred HHHHh--hcccCCCEEEEECCCcCHHHHHHHHhhc--CEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCe
Confidence 44443 5566889999999999999999998762 7899999999999998887753 56777777654321 1234
Q ss_pred hhhhhcccCCcEEEEEc-CCccHHHHHHHHHhCCCcEEEEh
Q psy7829 439 DLCYLNLHRGAKVLEIG-SGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 439 d~i~~~l~~~~~vLD~~-~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
|.++....-.. +. -....+...+.+.|+|+|.++..
T Consensus 160 D~v~~~~~l~~----~~~~~~~~~l~~~~~~LkpgG~l~i~ 196 (254)
T 1xtp_A 160 DLIVIQWTAIY----LTDADFVKFFKHCQQALTPNGYIFFK 196 (254)
T ss_dssp EEEEEESCGGG----SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEcchhhh----CCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 43332110000 00 00223456677889999988765
No 459
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.40 E-value=1.5e-07 Score=89.91 Aligned_cols=101 Identities=15% Similarity=0.036 Sum_probs=67.2
Q ss_pred CCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccc--ccccccccccccc-cccchhhhhcccCC
Q psy7829 372 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTN--HIDLIANETIEII-PHILDLCYLNLHRG 448 (511)
Q Consensus 372 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~--~v~~i~~d~~~~l-~~~~d~i~~~l~~~ 448 (511)
.++.+|||+|||+|.++..+++.. .+|+++|+++.+++.++++.... +++++.+|..... +..+|.++....-.
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLG---YDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIVSTVVFM 195 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEEEEECSSGG
T ss_pred cCCCcEEEECCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccEEEEccchh
Confidence 478999999999999999999873 79999999999988877766533 6777777754432 33444443321100
Q ss_pred cEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 449 AKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 449 ~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
. ++ ......+...+.+.|+|+|.++.+
T Consensus 196 ~--~~-~~~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 196 F--LN-RERVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp G--SC-GGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred h--CC-HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 0 00 000113556677888999986654
No 460
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.40 E-value=2.2e-07 Score=84.34 Aligned_cols=98 Identities=20% Similarity=0.201 Sum_probs=65.4
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccccccccccccccc-ccccchhhhhcccCC
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEI-IPHILDLCYLNLHRG 448 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~-l~~~~d~i~~~l~~~ 448 (511)
.++++.+|||+|||+|.++..+++.. .+|+++|+++++++.++++. ++.++.++.... .+..+|.++...
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~---~~~~~~~d~~~~~~~~~fD~v~~~~--- 110 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAAG---FDVDATDGSPELAAEASRRL---GRPVRTMLFHQLDAIDAYDAVWAHA--- 110 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHH---TSCCEECCGGGCCCCSCEEEEEECS---
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHcC---CeEEEECCCHHHHHHHHHhc---CCceEEeeeccCCCCCcEEEEEecC---
Confidence 45678999999999999999998763 79999999999999988876 455555553322 122344333211
Q ss_pred cEEEEEcC--CccHHHHHHHHHhCCCcEEEEh
Q psy7829 449 AKVLEIGS--GSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 449 ~~vLD~~~--g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
++.... ..-.+...+.+.|+|+|.++..
T Consensus 111 --~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 111 --CLLHVPRDELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp --CGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --chhhcCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 000000 1123456778889999988765
No 461
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.40 E-value=2.2e-07 Score=88.79 Aligned_cols=72 Identities=11% Similarity=0.215 Sum_probs=59.3
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc--cccccccccccc
Q psy7829 358 RSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST--NHIDLIANETIE 432 (511)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~--~~v~~i~~d~~~ 432 (511)
..+..++.. +.+.++.+|||+|||+|..+..+++.+ ++++|+++|+++++++.+++++.. .+++++++|...
T Consensus 13 vLl~e~l~~--L~~~~g~~vLD~g~G~G~~s~~la~~~-~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~ 86 (301)
T 1m6y_A 13 VMVREVIEF--LKPEDEKIILDCTVGEGGHSRAILEHC-PGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYRE 86 (301)
T ss_dssp TTHHHHHHH--HCCCTTCEEEETTCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGG
T ss_pred HHHHHHHHh--cCCCCCCEEEEEeCCcCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHH
Confidence 345566666 677899999999999999999999987 468999999999999998887764 578888887543
No 462
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.40 E-value=3.3e-07 Score=84.05 Aligned_cols=103 Identities=13% Similarity=0.172 Sum_probs=68.3
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc--cccccccccccccc--cccchhhhhcc
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST--NHIDLIANETIEII--PHILDLCYLNL 445 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~--~~v~~i~~d~~~~l--~~~~d~i~~~l 445 (511)
.+.++.+|||+|||+|..+..+++.. .+|+++|+++++++.++++... .+++++.+|..+.. +..+|.++.+.
T Consensus 35 ~~~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 111 (227)
T 1ve3_A 35 YMKKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFID 111 (227)
T ss_dssp SCCSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEES
T ss_pred hcCCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcC
Confidence 44568999999999999999998775 4999999999999888776542 56788877754421 12344433321
Q ss_pred cCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 446 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 446 ~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.-...- ......+...+.+.|+|+|.++..
T Consensus 112 ~~~~~~---~~~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 112 SIVHFE---PLELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp CGGGCC---HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chHhCC---HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 100000 001123456677889999998766
No 463
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.40 E-value=2.8e-07 Score=92.31 Aligned_cols=121 Identities=11% Similarity=0.137 Sum_probs=79.3
Q ss_pred CCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-c-cccccccccccccc------ccchh
Q psy7829 372 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-N-HIDLIANETIEIIP------HILDL 440 (511)
Q Consensus 372 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~-~v~~i~~d~~~~l~------~~~d~ 440 (511)
.++.+|||+|||+|.+++.+|+.. ..+|+++|+++++++.+++|+. . . +++++.+|..+.++ ..+|.
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~ 296 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDV 296 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCE
Confidence 578999999999999999999763 2699999999988888777765 3 3 67888888766543 23555
Q ss_pred hhhcccCCc----EEEEEcCCccHHHHHHHHHhCCCcEEEEh--------HHHHHHHHHHHHhcCC
Q psy7829 441 CYLNLHRGA----KVLEIGSGSGYLATLMAHLVGPTGHVTGL--------EHMMDIAIESIANIST 494 (511)
Q Consensus 441 i~~~l~~~~----~vLD~~~g~g~~~~~l~~~l~~~g~v~~~--------~~ml~~a~~~~~~~~~ 494 (511)
++.+.+... .+.+...+...+.....+.++|+|.++.. +...+..++.+.+.|.
T Consensus 297 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~ 362 (396)
T 3c0k_A 297 IVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGR 362 (396)
T ss_dssp EEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCC
Confidence 444332100 01111112233455567788999988764 3445555556666554
No 464
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.39 E-value=1.2e-07 Score=93.12 Aligned_cols=97 Identities=16% Similarity=0.209 Sum_probs=60.8
Q ss_pred CCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc----cccccccccccccc-ccccchhhhhccc
Q psy7829 372 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS----TNHIDLIANETIEI-IPHILDLCYLNLH 446 (511)
Q Consensus 372 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~----~~~v~~i~~d~~~~-l~~~~d~i~~~l~ 446 (511)
-+|++|||||||+|.+++.+|+.. + .+|+|||.++ ++..+++++. .++|++++++..+. ++..+|.++..+-
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aG-A-~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~ 158 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAG-A-RRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWM 158 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTT-C-SEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCC
T ss_pred cCCCEEEEeCCCccHHHHHHHHhC-C-CEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecc
Confidence 378999999999999999888765 3 6899999884 5555554443 24477888775443 3444555544321
Q ss_pred CCcEEEEEcCCccHH---HHHHHHHhCCCcEEE
Q psy7829 447 RGAKVLEIGSGSGYL---ATLMAHLVGPTGHVT 476 (511)
Q Consensus 447 ~~~~vLD~~~g~g~~---~~~l~~~l~~~g~v~ 476 (511)
.. ...+.+.+ .....+.|+|+|.++
T Consensus 159 ~~-----~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 159 GY-----GLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp BT-----TBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred cc-----cccccchhhhHHHHHHhhCCCCceEC
Confidence 10 11123222 233446789988764
No 465
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.39 E-value=3.9e-07 Score=84.96 Aligned_cols=105 Identities=16% Similarity=0.155 Sum_probs=72.1
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHh------CCC-----ceEEEEeCCH---H-----------HHHHHHHHHhccCCCc-
Q psy7829 132 VDGAKVLDLGSGSGYQTCVFAHMV------GPT-----GKVIGVEHIP---E-----------LIEASLRNISKGNKDL- 185 (511)
Q Consensus 132 ~~~~~vLDiG~G~G~~~~~la~~~------~~~-----~~v~~iD~~~---~-----------~~~~a~~~~~~~~~~~- 185 (511)
+++.+|||+|+|+|+.++.+++.. .|+ .+++++|..+ + ..+.|++.++.+....
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 355799999999999998887764 453 5899999876 3 3346666665421000
Q ss_pred ------C--CCCCeEEEEccCCCCCCC--C---CCccEEEecCCC---------CchHHHHHhhcccCcEEEE
Q psy7829 186 ------L--DSGRVRIVEADAREGYLP--E---APYDVIYYGGCV---------SEVPSRVLNQLKKGGRILA 236 (511)
Q Consensus 186 ------~--~~~~v~~~~~d~~~~~~~--~---~~fD~I~~~~~~---------~~~~~~~~~~LkpgG~l~~ 236 (511)
+ ...+++++.+|+.+..+. . ..||+|+.++-. ..+.+.+.+.|+|||+|+.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 0 124678999998753221 1 379999998522 1245799999999999985
No 466
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.39 E-value=7.1e-07 Score=83.06 Aligned_cols=105 Identities=15% Similarity=0.210 Sum_probs=72.1
Q ss_pred HHHHHhhcCCCC--CEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCc-CC--C-CCeEEEEc
Q psy7829 123 AAENLKLHLVDG--AKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDL-LD--S-GRVRIVEA 196 (511)
Q Consensus 123 ~~~~l~~~~~~~--~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-~~--~-~~v~~~~~ 196 (511)
+.+.+. ++++ .+|||+|||+|..+..++... ++|+++|+++.+.+.++++++...... +. . .+++++++
T Consensus 78 l~~al~--l~~g~~~~VLDl~~G~G~dal~lA~~g---~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~ 152 (258)
T 2oyr_A 78 VAKAVG--IKGDYLPDVVDATAGLGRDAFVLASVG---CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHA 152 (258)
T ss_dssp HHHHTT--CBTTBCCCEEETTCTTCHHHHHHHHHT---CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEES
T ss_pred HHHHhc--ccCCCCCEEEEcCCcCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEEC
Confidence 344443 5566 899999999999999999974 369999999998888777765321000 00 1 47999999
Q ss_pred cCCCCCC-CCCCccEEEecCCCCchH-----HHHHhhcccCc
Q psy7829 197 DAREGYL-PEAPYDVIYYGGCVSEVP-----SRVLNQLKKGG 232 (511)
Q Consensus 197 d~~~~~~-~~~~fD~I~~~~~~~~~~-----~~~~~~LkpgG 232 (511)
|..+... ....||+|+++++++.-. ++..+.|++.+
T Consensus 153 D~~~~L~~~~~~fDvV~lDP~y~~~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 153 SSLTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp CHHHHSTTCSSCCSEEEECCCCCCCCC-----HHHHHHHHHS
T ss_pred CHHHHHHhCcccCCEEEEcCCCCCcccchHHHHHHHHHHHhh
Confidence 9865222 124699999999886421 24456666544
No 467
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.38 E-value=7.2e-07 Score=92.89 Aligned_cols=96 Identities=24% Similarity=0.186 Sum_probs=70.0
Q ss_pred CCEEEEEcCCccHHH---HHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCccE
Q psy7829 134 GAKVLDLGSGSGYQT---CVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYDV 210 (511)
Q Consensus 134 ~~~vLDiG~G~G~~~---~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 210 (511)
+..|||+|||+|-++ +..++..+...+|+++|.++ +...+++..+.++ ..++|+++++|+++...+ .++|+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~----~~dkVtVI~gd~eev~LP-EKVDI 431 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEE----WGSQVTVVSSDMREWVAP-EKADI 431 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHT----TGGGEEEEESCTTTCCCS-SCEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhcc----CCCeEEEEeCcceeccCC-cccCE
Confidence 347999999999984 44444443344799999997 5667888888776 567899999999874333 78999
Q ss_pred EEecCCC-----C---chHHHHHhhcccCcEEE
Q psy7829 211 IYYGGCV-----S---EVPSRVLNQLKKGGRIL 235 (511)
Q Consensus 211 I~~~~~~-----~---~~~~~~~~~LkpgG~l~ 235 (511)
|++-..- + .++....+.|||||.++
T Consensus 432 IVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 432 IVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 9985321 1 22345568999999874
No 468
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.38 E-value=3.1e-07 Score=85.78 Aligned_cols=105 Identities=15% Similarity=0.150 Sum_probs=66.0
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc--cccccccccccccc-cccchhhhhcc
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST--NHIDLIANETIEII-PHILDLCYLNL 445 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~--~~v~~i~~d~~~~l-~~~~d~i~~~l 445 (511)
....++.+|||+|||+|..+..+++.. .+|+++|+++++++.++++... .+++++++|..+.. +..+|.+....
T Consensus 37 ~~~~~~~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 113 (252)
T 1wzn_A 37 DAKREVRRVLDLACGTGIPTLELAERG---YEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFF 113 (252)
T ss_dssp TCSSCCCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEEECS
T ss_pred hcccCCCEEEEeCCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCccEEEEcC
Confidence 344678899999999999999998763 7999999999999988877642 25777777754421 12233322110
Q ss_pred cCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 446 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 446 ~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.... ..+. -..-.+...+.+.|+|+|.++.-
T Consensus 114 ~~~~-~~~~-~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 114 STIM-YFDE-EDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp SGGG-GSCH-HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred Cchh-cCCH-HHHHHHHHHHHHHcCCCeEEEEe
Confidence 0000 0000 00122345667888999988653
No 469
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.37 E-value=3.5e-07 Score=88.39 Aligned_cols=103 Identities=11% Similarity=0.108 Sum_probs=74.4
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc--------ccccccccccccccc---cccch
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS--------TNHIDLIANETIEII---PHILD 439 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~--------~~~v~~i~~d~~~~l---~~~~d 439 (511)
...+.+|||||||+|..+..+++.. +..+|+++|+++++++.+++++. .++++++.+|+.+.+ +..+|
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD 153 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYD 153 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEE
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCcc
Confidence 4567899999999999999998764 45799999999999998887763 357888888876654 34466
Q ss_pred hhhhcccCCcEEEEEcCC------ccHHHHHHHHHhCCCcEEEEh
Q psy7829 440 LCYLNLHRGAKVLEIGSG------SGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 440 ~i~~~l~~~~~vLD~~~g------~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.++.+...... . .+ +-.+...+.+.|+|+|.++..
T Consensus 154 ~Ii~d~~~~~~---~-~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 154 VVIIDLTDPVG---E-DNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp EEEEECCCCBS---T-TCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEECCCCccc---c-cCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 66654332110 0 02 234566778889999988754
No 470
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.37 E-value=8e-07 Score=87.98 Aligned_cols=70 Identities=19% Similarity=0.222 Sum_probs=53.2
Q ss_pred HHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---ccccccccccccccc
Q psy7829 359 SIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETIEII 434 (511)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~~~l 434 (511)
.+..++.. +... +.+|||+|||+|.+++.+|+.. .+|+++|+++++++.+++|.. ..|++++.+|..+.+
T Consensus 202 l~~~~~~~--~~~~-~~~vLDl~cG~G~~~l~la~~~---~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~ 274 (369)
T 3bt7_A 202 MLEWALDV--TKGS-KGDLLELYCGNGNFSLALARNF---DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFT 274 (369)
T ss_dssp HHHHHHHH--TTTC-CSEEEEESCTTSHHHHHHGGGS---SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHH
T ss_pred HHHHHHHH--hhcC-CCEEEEccCCCCHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHH
Confidence 34444444 3333 6789999999999999998754 799999999998888777764 457888888876554
No 471
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.36 E-value=1.2e-06 Score=79.46 Aligned_cols=113 Identities=12% Similarity=0.108 Sum_probs=72.9
Q ss_pred HHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc-ccccccccccccc--
Q psy7829 357 ERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST-NHIDLIANETIEI-- 433 (511)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~-~~v~~i~~d~~~~-- 433 (511)
...+...+.. .+.++.+|||+|||+|.++..+++.. + .+|+++|+++.+++.++++... ++++++.+|..+.
T Consensus 29 ~~~~~~~l~~---~~~~~~~vLdiGcG~G~~~~~l~~~~-~-~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~ 103 (215)
T 2pxx_A 29 FSSFRALLEP---ELRPEDRILVLGCGNSALSYELFLGG-F-PNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDF 103 (215)
T ss_dssp HHHHHHHHGG---GCCTTCCEEEETCTTCSHHHHHHHTT-C-CCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCS
T ss_pred HHHHHHHHHH---hcCCCCeEEEECCCCcHHHHHHHHcC-C-CcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCC
Confidence 3444444443 34788999999999999999998764 3 3899999999999998887653 5677777765442
Q ss_pred ccccchhhhhcccCCcEEEEEcC--------------CccHHHHHHHHHhCCCcEEEEh
Q psy7829 434 IPHILDLCYLNLHRGAKVLEIGS--------------GSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 434 l~~~~d~i~~~l~~~~~vLD~~~--------------g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.+..+|.++....-+. +.| ....+...+.+.|+|+|.++.+
T Consensus 104 ~~~~fD~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 158 (215)
T 2pxx_A 104 PSASFDVVLEKGTLDA----LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISM 158 (215)
T ss_dssp CSSCEEEEEEESHHHH----HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcccEEEECcchhh----hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEE
Confidence 1122333221100000 001 1133456677889999998877
No 472
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.35 E-value=1.3e-06 Score=80.46 Aligned_cols=100 Identities=14% Similarity=0.178 Sum_probs=67.1
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccc--------cccccccccccc--cccchh
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNH--------IDLIANETIEII--PHILDL 440 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~--------v~~i~~d~~~~l--~~~~d~ 440 (511)
++++.+|||+|||+|.++..+++.. .+|+++|+++.+++.++++....+ ++++.+|..... +..+|.
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 104 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASKG---YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDF 104 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeE
Confidence 4689999999999999999999873 799999999999998888776433 456655543321 222333
Q ss_pred hhhcccCCcEEEEEcCCcc---HHHHHHHHHhCCCcEEEEh
Q psy7829 441 CYLNLHRGAKVLEIGSGSG---YLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 441 i~~~l~~~~~vLD~~~g~g---~~~~~l~~~l~~~g~v~~~ 478 (511)
++... ++..-.... .+...+.+.|+|+|.++..
T Consensus 105 v~~~~-----~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (235)
T 3sm3_A 105 AVMQA-----FLTSVPDPKERSRIIKEVFRVLKPGAYLYLV 140 (235)
T ss_dssp EEEES-----CGGGCCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEcc-----hhhcCCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 32210 000000222 4567778889999998875
No 473
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.35 E-value=5.7e-07 Score=86.07 Aligned_cols=116 Identities=16% Similarity=0.097 Sum_probs=71.6
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc-------cccccccccccc
Q psy7829 358 RSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI-------STNHIDLIANET 430 (511)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~-------~~~~v~~i~~d~ 430 (511)
.....+... +...++.+|||||||+|..+..+++.. .+|+++|+++++++.++++. ...++.+..++.
T Consensus 44 ~~~~~l~~~--l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~ 118 (293)
T 3thr_A 44 EYKAWLLGL--LRQHGCHRVLDVACGTGVDSIMLVEEG---FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANW 118 (293)
T ss_dssp HHHHHHHHH--HHHTTCCEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCG
T ss_pred HHHHHHHHH--hcccCCCEEEEecCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecCh
Confidence 334444444 455678999999999999999998764 69999999999999887664 134455666654
Q ss_pred cccc-----cccchhhhhcccCCcEEEEEc---CCccHHHHHHHHHhCCCcEEEEh
Q psy7829 431 IEII-----PHILDLCYLNLHRGAKVLEIG---SGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 431 ~~~l-----~~~~d~i~~~l~~~~~vLD~~---~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.... +..+|.++.....-..+.|+. .....+...+.+.|+|||.++..
T Consensus 119 ~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 119 LTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp GGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred hhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 4322 223443332100000000000 00234567788889999998866
No 474
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.35 E-value=8.7e-07 Score=83.65 Aligned_cols=92 Identities=20% Similarity=0.250 Sum_probs=67.6
Q ss_pred CCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccccccccccccccc--ccccchhhhhcccCCc
Q psy7829 372 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEI--IPHILDLCYLNLHRGA 449 (511)
Q Consensus 372 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~--l~~~~d~i~~~l~~~~ 449 (511)
.++.+|||+|||+|.++..+++.. +..+|+++|+++++++.+.++. .++.++.+|.... .+..+|.++..
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~----- 155 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY--PQVTFCVASSHRLPFSDTSMDAIIRI----- 155 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC--TTSEEEECCTTSCSBCTTCEEEEEEE-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC--CCcEEEEcchhhCCCCCCceeEEEEe-----
Confidence 578999999999999999999876 4579999999999999888775 4566666664332 12234444332
Q ss_pred EEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 450 KVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 450 ~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
+.......+.+.|+|+|.++.+
T Consensus 156 -------~~~~~l~~~~~~L~pgG~l~~~ 177 (269)
T 1p91_A 156 -------YAPCKAEELARVVKPGGWVITA 177 (269)
T ss_dssp -------SCCCCHHHHHHHEEEEEEEEEE
T ss_pred -------CChhhHHHHHHhcCCCcEEEEE
Confidence 1123357788899999998877
No 475
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.34 E-value=2.9e-07 Score=82.81 Aligned_cols=54 Identities=15% Similarity=0.266 Sum_probs=42.4
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCC-CcEEEEEcCCHHHHHHHHhhccccccccccccccc
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGP-TGHVTGLEHMMDIAIESIANISTNHIDLIANETIE 432 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~-~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~ 432 (511)
++++.+|||+|||+|..+..+++.+++ .++|+|+|+++.. ..++++++++|..+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--------~~~~v~~~~~d~~~ 74 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--------PIPNVYFIQGEIGK 74 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--------CCTTCEEEECCTTT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--------CCCCceEEEccccc
Confidence 578899999999999999999998842 6899999998731 23456777666543
No 476
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.33 E-value=3.9e-07 Score=86.70 Aligned_cols=59 Identities=19% Similarity=0.168 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcC-CHHHHHHHHhhc
Q psy7829 356 SERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEH-MMDIAIESIANI 418 (511)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~-~~~~~~~~~~~~ 418 (511)
+...+..+... ....++.+|||+|||+|.+++.+++.. . .+|+++|+ ++++++.+++|.
T Consensus 64 ~~~l~~~l~~~--~~~~~~~~vLDlG~G~G~~~~~~a~~~-~-~~v~~~D~s~~~~~~~a~~n~ 123 (281)
T 3bzb_A 64 ARALADTLCWQ--PELIAGKTVCELGAGAGLVSIVAFLAG-A-DQVVATDYPDPEILNSLESNI 123 (281)
T ss_dssp HHHHHHHHHHC--GGGTTTCEEEETTCTTSHHHHHHHHTT-C-SEEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhc--chhcCCCeEEEecccccHHHHHHHHcC-C-CEEEEEeCCCHHHHHHHHHHH
Confidence 44444444443 344678899999999999999988753 2 59999999 899988888777
No 477
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.33 E-value=2.3e-07 Score=92.35 Aligned_cols=119 Identities=14% Similarity=0.147 Sum_probs=76.7
Q ss_pred CCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cccccccccccccccc------ccchhhhh
Q psy7829 373 RGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TNHIDLIANETIEIIP------HILDLCYL 443 (511)
Q Consensus 373 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~~v~~i~~d~~~~l~------~~~d~i~~ 443 (511)
++.+|||+|||+|.+++.+|+.. .+|+++|+++.+++.+++|+. ..+++++.+|..+.++ ..+|.++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGF---REVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHE---EEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEE
Confidence 78899999999999999999873 899999999988888877765 4457888888766543 23444443
Q ss_pred cccCCc----EEEEEcCCccHHHHHHHHHhCCCcEEEEh--------HHHHHHHHHHHHhcCC
Q psy7829 444 NLHRGA----KVLEIGSGSGYLATLMAHLVGPTGHVTGL--------EHMMDIAIESIANIST 494 (511)
Q Consensus 444 ~l~~~~----~vLD~~~g~g~~~~~l~~~l~~~g~v~~~--------~~ml~~a~~~~~~~~~ 494 (511)
+.+... .+.+...+...+...+.+.|+|+|.++.. +...+..++.+...+.
T Consensus 286 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~ 348 (382)
T 1wxx_A 286 DPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHR 348 (382)
T ss_dssp CCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCC
Confidence 322100 00000001122445567788999988765 2334445555555553
No 478
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.32 E-value=2.2e-07 Score=90.88 Aligned_cols=100 Identities=19% Similarity=0.255 Sum_probs=66.1
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-ccccccccccccc-cc-ccchhhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NHIDLIANETIEI-IP-HILDLCY 442 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~v~~i~~d~~~~-l~-~~~d~i~ 442 (511)
+.+.++.+|||||||+|.++..+++.. ..+|+|+|+++ +++.+++++. . .+++++.+|..+. ++ ..+|.++
T Consensus 60 ~~~~~~~~VLDiGcGtG~ls~~la~~g--~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv 136 (340)
T 2fyt_A 60 PHIFKDKVVLDVGCGTGILSMFAAKAG--AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVII 136 (340)
T ss_dssp GGGTTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEE
T ss_pred hhhcCCCEEEEeeccCcHHHHHHHHcC--CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEE
Confidence 456789999999999999999998763 26999999995 7777776654 2 5678888876543 11 3455444
Q ss_pred hcccCCcEEEEEcCCcc---HHHHHHHHHhCCCcEEE
Q psy7829 443 LNLHRGAKVLEIGSGSG---YLATLMAHLVGPTGHVT 476 (511)
Q Consensus 443 ~~l~~~~~vLD~~~g~g---~~~~~l~~~l~~~g~v~ 476 (511)
.+.-.. . ..... .+...+.+.|+|+|.++
T Consensus 137 s~~~~~--~---l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 137 SEWMGY--F---LLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ECCCBT--T---BTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EcCchh--h---ccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 322000 0 01111 23445568899999987
No 479
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.32 E-value=3.6e-07 Score=90.70 Aligned_cols=104 Identities=22% Similarity=0.242 Sum_probs=67.9
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----cccccccccccccc-cccchhhhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NHIDLIANETIEII-PHILDLCYL 443 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~v~~i~~d~~~~l-~~~~d~i~~ 443 (511)
..+.++.+|||||||+|.+++.+++.. . .+|+|+|++ ++++.+++++.. ++++++.+|..+.. +..+|.++.
T Consensus 59 ~~~~~~~~VLDlGcGtG~ls~~la~~g-~-~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~ 135 (376)
T 3r0q_C 59 KHHFEGKTVLDVGTGSGILAIWSAQAG-A-RKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIIS 135 (376)
T ss_dssp TTTTTTCEEEEESCTTTHHHHHHHHTT-C-SEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEE
T ss_pred cccCCCCEEEEeccCcCHHHHHHHhcC-C-CEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEE
Confidence 456789999999999999999999874 2 599999999 888877766543 33788888765532 234555444
Q ss_pred cccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEE
Q psy7829 444 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTG 477 (511)
Q Consensus 444 ~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~ 477 (511)
+.-.. .++--.-...+...+.+.|+|+|.++.
T Consensus 136 ~~~~~--~l~~e~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 136 EWMGY--FLLRESMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp CCCBT--TBTTTCTHHHHHHHHHHHEEEEEEEES
T ss_pred cChhh--cccchHHHHHHHHHHHhhCCCCeEEEE
Confidence 22100 000000012344556688999998854
No 480
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.32 E-value=2.2e-07 Score=86.27 Aligned_cols=99 Identities=10% Similarity=0.125 Sum_probs=66.5
Q ss_pred CCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcccc---cccccccccccccc--ccchhhhhcccC
Q psy7829 373 RGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTN---HIDLIANETIEIIP--HILDLCYLNLHR 447 (511)
Q Consensus 373 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~---~v~~i~~d~~~~l~--~~~d~i~~~l~~ 447 (511)
++.+|||||||+|.++..+++... .+|+++|+++.+++.++++.... +++++.+|..+... ..+|.++....
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~- 155 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLF--REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWV- 155 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTC--SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESC-
T ss_pred CCCEEEEECCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcch-
Confidence 688999999999999999887652 69999999999999888877643 57777776443221 13444332210
Q ss_pred CcEEEEEcCCc--cHHHHHHHHHhCCCcEEEEh
Q psy7829 448 GAKVLEIGSGS--GYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 448 ~~~vLD~~~g~--g~~~~~l~~~l~~~g~v~~~ 478 (511)
+..-... -.+...+.+.|+|+|.++..
T Consensus 156 ----l~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 184 (241)
T 2ex4_A 156 ----IGHLTDQHLAEFLRRCKGSLRPNGIIVIK 184 (241)
T ss_dssp ----GGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----hhhCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 0000001 13456777889999998873
No 481
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.31 E-value=1.6e-06 Score=71.55 Aligned_cols=96 Identities=18% Similarity=0.171 Sum_probs=68.3
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCcc-HHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEcc
Q psy7829 119 QIADAAENLKLHLVDGAKVLDLGSGSG-YQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEAD 197 (511)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~vLDiG~G~G-~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 197 (511)
|...+.+.+.....++.+|||||||+| ..+..|++.. ...|+++|+++.+++ +++.|
T Consensus 21 m~e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~--------------------~v~dD 78 (153)
T 2k4m_A 21 MWNDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG--------------------IVRDD 78 (153)
T ss_dssp HHHHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT--------------------EECCC
T ss_pred HHHHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc--------------------eEEcc
Confidence 455566666656677889999999999 5999999854 357999999986432 77888
Q ss_pred CCCCCCCC-CCccEEEecCCCCchHHHHHhhcc-cCcEEEE
Q psy7829 198 AREGYLPE-APYDVIYYGGCVSEVPSRVLNQLK-KGGRILA 236 (511)
Q Consensus 198 ~~~~~~~~-~~fD~I~~~~~~~~~~~~~~~~Lk-pgG~l~~ 236 (511)
++++.... ..||+|++..+...+...+.++-+ -|.-+++
T Consensus 79 iF~P~~~~Y~~~DLIYsirPP~El~~~i~~lA~~v~adliI 119 (153)
T 2k4m_A 79 ITSPRMEIYRGAALIYSIRPPAEIHSSLMRVADAVGARLII 119 (153)
T ss_dssp SSSCCHHHHTTEEEEEEESCCTTTHHHHHHHHHHHTCEEEE
T ss_pred CCCCcccccCCcCEEEEcCCCHHHHHHHHHHHHHcCCCEEE
Confidence 87644321 479999888777777655555443 3555655
No 482
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.31 E-value=1.2e-06 Score=77.84 Aligned_cols=73 Identities=22% Similarity=0.221 Sum_probs=55.4
Q ss_pred CCCHHHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc------cccccccc
Q psy7829 354 PSSERSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS------TNHIDLIA 427 (511)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~------~~~v~~i~ 427 (511)
+...+..++++.. .+.+..+|||+|| ||.|+++|+. ++++|+++|.++++++.+++++. ..+++++.
T Consensus 14 ~~v~~~~~~~L~~---~l~~a~~VLEiGt--GySTl~lA~~--~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~ 86 (202)
T 3cvo_A 14 LTMPPAEAEALRM---AYEEAEVILEYGS--GGSTVVAAEL--PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVW 86 (202)
T ss_dssp CCSCHHHHHHHHH---HHHHCSEEEEESC--SHHHHHHHTS--TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEE
T ss_pred ccCCHHHHHHHHH---HhhCCCEEEEECc--hHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEE
Confidence 4445556677765 3457889999998 6899999974 35999999999999888877664 34688888
Q ss_pred cccccc
Q psy7829 428 NETIEI 433 (511)
Q Consensus 428 ~d~~~~ 433 (511)
+++.+.
T Consensus 87 gda~~~ 92 (202)
T 3cvo_A 87 TDIGPT 92 (202)
T ss_dssp CCCSSB
T ss_pred eCchhh
Confidence 886543
No 483
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.31 E-value=6e-07 Score=83.02 Aligned_cols=101 Identities=14% Similarity=0.152 Sum_probs=65.6
Q ss_pred CCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccccccccccccc-cccchhhhhcccCCcE
Q psy7829 372 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIEII-PHILDLCYLNLHRGAK 450 (511)
Q Consensus 372 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~l-~~~~d~i~~~l~~~~~ 450 (511)
.++.+|||+|||+|..+..+++.. .+|+++|+++++++.++++. ++++++.+|..+.. +..+|.++.....-..
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~--~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~ 113 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL--PDATLHQGDMRDFRLGRKFSAVVSMFSSVGY 113 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC--TTCEEEECCTTTCCCSSCEEEEEECTTGGGG
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC--CCCEEEECCHHHcccCCCCcEEEEcCchHhh
Confidence 678999999999999999999887 49999999999999988875 45777776654321 2233433310000000
Q ss_pred EEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 451 VLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 451 vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
+.+ ....-.+...+.+.|+|+|.++..
T Consensus 114 ~~~-~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 114 LKT-TEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp CCS-HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cCC-HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 000 000123345667788999998765
No 484
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.30 E-value=1.1e-06 Score=87.36 Aligned_cols=108 Identities=16% Similarity=0.161 Sum_probs=73.8
Q ss_pred HHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----ccccccccccccccccc
Q psy7829 362 HILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NHIDLIANETIEIIPHI 437 (511)
Q Consensus 362 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~v~~i~~d~~~~l~~~ 437 (511)
.++.. +.+.++.+|||||||+|.++..+++.. |+.+++++|+ +.+++.+++++.. .+++++.+|..+.++..
T Consensus 173 ~~~~~--~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 248 (374)
T 1qzz_A 173 APADA--YDWSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPVT 248 (374)
T ss_dssp HHHHT--SCCTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCC
T ss_pred HHHHh--CCCCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCC
Confidence 34444 567788999999999999999999887 6689999999 9998888776542 36888888765544433
Q ss_pred chhhhhcccCCcEEEEEcCCc--cHHHHHHHHHhCCCcEEEEh
Q psy7829 438 LDLCYLNLHRGAKVLEIGSGS--GYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 438 ~d~i~~~l~~~~~vLD~~~g~--g~~~~~l~~~l~~~g~v~~~ 478 (511)
+|.++...--. ++. .. -.+...+.+.++|+|.++.+
T Consensus 249 ~D~v~~~~vl~----~~~-~~~~~~~l~~~~~~L~pgG~l~i~ 286 (374)
T 1qzz_A 249 ADVVLLSFVLL----NWS-DEDALTILRGCVRALEPGGRLLVL 286 (374)
T ss_dssp EEEEEEESCGG----GSC-HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEEecccc----CCC-HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 44443321000 000 01 13456777888999987764
No 485
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.30 E-value=3.5e-07 Score=84.88 Aligned_cols=71 Identities=14% Similarity=0.097 Sum_probs=55.0
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-ccccccccccccccc-ccchhhhhc
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NHIDLIANETIEIIP-HILDLCYLN 444 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~v~~i~~d~~~~l~-~~~d~i~~~ 444 (511)
..++.+|||+|||+|.+++.+++.. .+|+++|+++.+++.+++++. . .+++++++|..+..+ ..+|.++.+
T Consensus 76 ~~~~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~ 151 (241)
T 3gdh_A 76 SFKCDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLS 151 (241)
T ss_dssp HSCCSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEEC
T ss_pred ccCCCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEEC
Confidence 3478999999999999999999764 899999999999888877764 3 468888888655432 345555543
No 486
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.30 E-value=3.3e-07 Score=89.50 Aligned_cols=94 Identities=13% Similarity=0.059 Sum_probs=70.3
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----cccccccccccccccccchhhhhccc
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NHIDLIANETIEIIPHILDLCYLNLH 446 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~v~~i~~d~~~~l~~~~d~i~~~l~ 446 (511)
+.++.+|||+|||+|.+++. |+ . ..+|+++|+++.+++.+++|+.. .+++++++|..+.+ ..+|.++.+.+
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~-~--~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~-~~fD~Vi~dpP 267 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CK-N--AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD-VKGNRVIMNLP 267 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TT-T--SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC-CCEEEEEECCT
T ss_pred cCCCCEEEEccCccCHHHHh-cc-C--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc-CCCcEEEECCc
Confidence 36899999999999999999 87 2 38999999999888888777653 45788888877766 55666655433
Q ss_pred CCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 447 RGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 447 ~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.. .-.+...+.+.++|+|.++..
T Consensus 268 ~~---------~~~~l~~~~~~L~~gG~l~~~ 290 (336)
T 2yx1_A 268 KF---------AHKFIDKALDIVEEGGVIHYY 290 (336)
T ss_dssp TT---------GGGGHHHHHHHEEEEEEEEEE
T ss_pred Hh---------HHHHHHHHHHHcCCCCEEEEE
Confidence 22 124556677788999987765
No 487
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.30 E-value=5e-07 Score=88.73 Aligned_cols=102 Identities=20% Similarity=0.268 Sum_probs=66.3
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---cc-cccccccccccc-c-cccchhhhh
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---TN-HIDLIANETIEI-I-PHILDLCYL 443 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~~-~v~~i~~d~~~~-l-~~~~d~i~~ 443 (511)
.+.++.+|||+|||+|.++..+++.. ..+|+|+|++ ++++.++++.. .. +++++.+|..+. + ...+|.++.
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~g--~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis 139 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKAG--ARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIIS 139 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHTT--CSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEE
T ss_pred ccCCCCEEEEEeccchHHHHHHHHCC--CCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEE
Confidence 34578999999999999999999873 2699999999 57777766654 22 378888876553 2 244565554
Q ss_pred cccCCcEEEEEcCCccHHHHHHHHHhCCCcEEE
Q psy7829 444 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVT 476 (511)
Q Consensus 444 ~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~ 476 (511)
+..... +.-..-...+...+.+.|+|+|.++
T Consensus 140 ~~~~~~--l~~~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 140 EWMGYC--LFYESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp CCCBBT--BTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred cccccc--ccCchhHHHHHHHHHHhCCCCCEEc
Confidence 321000 0000112234456678899999874
No 488
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.28 E-value=3.5e-07 Score=96.54 Aligned_cols=73 Identities=12% Similarity=0.200 Sum_probs=56.8
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhc---------cccccccccc
Q psy7829 358 RSIAHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANI---------STNHIDLIAN 428 (511)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~---------~~~~v~~i~~ 428 (511)
.....++.. +...++.+|||||||+|.++..+++..++..+|+|+|+++.+++.+++++ +..+++++++
T Consensus 708 qRle~LLel--L~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqG 785 (950)
T 3htx_A 708 QRVEYALKH--IRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDG 785 (950)
T ss_dssp HHHHHHHHH--HHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEES
T ss_pred HHHHHHHHH--hcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEEC
Confidence 334445554 45568999999999999999999987655579999999999999887733 3567888888
Q ss_pred cccc
Q psy7829 429 ETIE 432 (511)
Q Consensus 429 d~~~ 432 (511)
|..+
T Consensus 786 Da~d 789 (950)
T 3htx_A 786 SILE 789 (950)
T ss_dssp CTTS
T ss_pred chHh
Confidence 7654
No 489
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.28 E-value=8.5e-07 Score=87.91 Aligned_cols=108 Identities=19% Similarity=0.275 Sum_probs=74.6
Q ss_pred HHHHHHhhcCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc----ccccccccccccccccc
Q psy7829 361 AHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS----TNHIDLIANETIEIIPH 436 (511)
Q Consensus 361 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~----~~~v~~i~~d~~~~l~~ 436 (511)
..++.. +...++.+|||||||+|.++..+++.. |+.+++++|+ +++++.+++++. .++++++.+|..+.++.
T Consensus 192 ~~l~~~--~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~ 267 (369)
T 3gwz_A 192 GQVAAA--YDFSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPD 267 (369)
T ss_dssp HHHHHH--SCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCS
T ss_pred HHHHHh--CCCccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCC
Confidence 344444 567788999999999999999999987 7789999999 888888877654 35688888876544443
Q ss_pred cchhhhhcccCCcEEEEEcCCcc---HHHHHHHHHhCCCcEEEEh
Q psy7829 437 ILDLCYLNLHRGAKVLEIGSGSG---YLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 437 ~~d~i~~~l~~~~~vLD~~~g~g---~~~~~l~~~l~~~g~v~~~ 478 (511)
.+|.++... ++ ...... .+...+.+.++|+|+++.+
T Consensus 268 ~~D~v~~~~-----vl-h~~~d~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 268 GADVYLIKH-----VL-HDWDDDDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp SCSEEEEES-----CG-GGSCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CceEEEhhh-----hh-ccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 445443221 00 001111 3456677888999998775
No 490
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.28 E-value=8.8e-07 Score=80.26 Aligned_cols=94 Identities=14% Similarity=0.129 Sum_probs=65.9
Q ss_pred CCCCEEEEEeccccHHHHHHHHHhCCCc-EEEEEcCCHHHHHHHHhhcccccccccccccccc--ccccchhhhhcccCC
Q psy7829 372 HRGAKVLEIGSGSGYLATLMAHLVGPTG-HVTGLEHMMDIAIESIANISTNHIDLIANETIEI--IPHILDLCYLNLHRG 448 (511)
Q Consensus 372 ~~~~~vLdiG~G~G~~~~~la~~~~~~~-~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~~--l~~~~d~i~~~l~~~ 448 (511)
.++.+|||+|||+|..+..+ + . +|+++|+++++++.++++. .+++++.+|..+. .+..+|.++....-.
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l----~--~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 106 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL----P--YPQKVGVEPSEAMLAVGRRRA--PEATWVRAWGEALPFPGESFDVVLLFTTLE 106 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC----C--CSEEEEECCCHHHHHHHHHHC--TTSEEECCCTTSCCSCSSCEEEEEEESCTT
T ss_pred CCCCeEEEECCCCCHhHHhC----C--CCeEEEEeCCHHHHHHHHHhC--CCcEEEEcccccCCCCCCcEEEEEEcChhh
Confidence 38899999999999998877 2 5 9999999999999988887 5677777765432 122345444321100
Q ss_pred cEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 449 AKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 449 ~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
.-.....+...+.+.++|+|.++..
T Consensus 107 -----~~~~~~~~l~~~~~~L~pgG~l~i~ 131 (211)
T 2gs9_A 107 -----FVEDVERVLLEARRVLRPGGALVVG 131 (211)
T ss_dssp -----TCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----hcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 0112345567788899999998776
No 491
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.28 E-value=4.7e-07 Score=79.28 Aligned_cols=54 Identities=13% Similarity=0.353 Sum_probs=43.6
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccccccccccc
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIE 432 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~ 432 (511)
+.++.+|||+|||+|..+..+++.++++.+++++|+++ +.. ..+++++.+|..+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~-------~~~~~~~~~d~~~ 73 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP-------IVGVDFLQGDFRD 73 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC-------CTTEEEEESCTTS
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc-------cCcEEEEEccccc
Confidence 67889999999999999999999876678999999998 532 2567777666543
No 492
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.27 E-value=5.2e-07 Score=80.75 Aligned_cols=53 Identities=19% Similarity=0.367 Sum_probs=41.5
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCC--------cEEEEEcCCHHHHHHHHhhccccccccc-cccc
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPT--------GHVTGLEHMMDIAIESIANISTNHIDLI-ANET 430 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~--------~~v~~id~~~~~~~~~~~~~~~~~v~~i-~~d~ 430 (511)
.++++.+|||+|||+|.++..+++..++. ++|+++|+++.. ...+++++ .+|.
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------~~~~~~~~~~~d~ 80 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------PLEGATFLCPADV 80 (196)
T ss_dssp CCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------CCTTCEEECSCCT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------cCCCCeEEEeccC
Confidence 35789999999999999999999997543 799999999732 23456666 6653
No 493
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.26 E-value=7.1e-07 Score=79.59 Aligned_cols=51 Identities=18% Similarity=0.339 Sum_probs=41.7
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccccccccccccccc
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANISTNHIDLIANETIE 432 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~~~v~~i~~d~~~ 432 (511)
++++.+|||+|||+|..+..+++. .++|+|+|+++.. ..++++++++|..+
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~--------~~~~v~~~~~D~~~ 73 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME--------EIAGVRFIRCDIFK 73 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC--------CCTTCEEEECCTTS
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc--------cCCCeEEEEccccC
Confidence 578999999999999999999987 3899999998641 24578888887544
No 494
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.26 E-value=3.3e-07 Score=87.74 Aligned_cols=102 Identities=14% Similarity=0.126 Sum_probs=58.3
Q ss_pred CCCCEEEEEeccccHHHHHHHHHh---CCCcEE--EEEcCCHHHHHHHHhhcc----cccccc--ccccccccc------
Q psy7829 372 HRGAKVLEIGSGSGYLATLMAHLV---GPTGHV--TGLEHMMDIAIESIANIS----TNHIDL--IANETIEII------ 434 (511)
Q Consensus 372 ~~~~~vLdiG~G~G~~~~~la~~~---~~~~~v--~~id~~~~~~~~~~~~~~----~~~v~~--i~~d~~~~l------ 434 (511)
.++.+|||||||+|.++..+++.. .++.+| +++|++++|++.++++.. ..++.+ ...+..+..
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 567899999999998776443322 145654 999999999998877653 234433 233322211
Q ss_pred --cccchhhhhcccCCcEEEEEcCCccHHHHHHHHHhCCCcEEEEh
Q psy7829 435 --PHILDLCYLNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 435 --~~~~d~i~~~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~~~ 478 (511)
+..||.+..... +..-.........+.+.|+|||.++.+
T Consensus 131 ~~~~~fD~V~~~~~-----l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 131 KELQKWDFIHMIQM-----LYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp TCCCCEEEEEEESC-----GGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCCCceeEEEEeee-----eeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 223444332210 000112334456677777787777654
No 495
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.24 E-value=3.7e-07 Score=88.37 Aligned_cols=102 Identities=12% Similarity=0.141 Sum_probs=66.4
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----------cccccccccccccc-----
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----------NHIDLIANETIEII----- 434 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----------~~v~~i~~d~~~~l----- 434 (511)
...++.+|||+|||+|..+..+++. +..+|+++|+++++++.++++... .+++++.+|.....
T Consensus 31 ~~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 108 (313)
T 3bgv_A 31 KKKRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKF 108 (313)
T ss_dssp TC--CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTC
T ss_pred ccCCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhc
Confidence 3457889999999999999998874 347999999999999888776532 36777777754431
Q ss_pred ---cccchhhhhcccCCcEEEEEc-CC---ccHHHHHHHHHhCCCcEEEEh
Q psy7829 435 ---PHILDLCYLNLHRGAKVLEIG-SG---SGYLATLMAHLVGPTGHVTGL 478 (511)
Q Consensus 435 ---~~~~d~i~~~l~~~~~vLD~~-~g---~g~~~~~l~~~l~~~g~v~~~ 478 (511)
+..+|.++....-. .. .. .-.+...+.+.|+|+|.++..
T Consensus 109 ~~~~~~fD~V~~~~~l~-----~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 109 RDPQMCFDICSCQFVCH-----YSFESYEQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp SSTTCCEEEEEEETCGG-----GGGGSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ccCCCCEEEEEEecchh-----hccCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 11344443321100 00 01 113455667788999998877
No 496
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.24 E-value=7e-07 Score=87.68 Aligned_cols=100 Identities=17% Similarity=0.196 Sum_probs=63.5
Q ss_pred cCCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc---c-ccccccccccccc-ccccchhhhh
Q psy7829 369 LNLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS---T-NHIDLIANETIEI-IPHILDLCYL 443 (511)
Q Consensus 369 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~---~-~~v~~i~~d~~~~-l~~~~d~i~~ 443 (511)
+...++.+|||||||+|.++..+++.. ..+|+++|+++ +++.+++++. . ++++++.+|..+. ++..+|.++.
T Consensus 46 l~~~~~~~VLDiGcGtG~ls~~la~~g--~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs 122 (348)
T 2y1w_A 46 HTDFKDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIIS 122 (348)
T ss_dssp GGGTTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEE
T ss_pred cccCCcCEEEEcCCCccHHHHHHHhCC--CCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEEEE
Confidence 556689999999999999999998753 26999999995 6666666543 3 5678888775543 2233444433
Q ss_pred cccCCcEEEEEcCCcc--HHHHHHHHHhCCCcEEE
Q psy7829 444 NLHRGAKVLEIGSGSG--YLATLMAHLVGPTGHVT 476 (511)
Q Consensus 444 ~l~~~~~vLD~~~g~g--~~~~~l~~~l~~~g~v~ 476 (511)
...... ..... .....+.+.|+|+|.++
T Consensus 123 ~~~~~~-----~~~~~~~~~l~~~~~~LkpgG~li 152 (348)
T 2y1w_A 123 EPMGYM-----LFNERMLESYLHAKKYLKPSGNMF 152 (348)
T ss_dssp CCCBTT-----BTTTSHHHHHHHGGGGEEEEEEEE
T ss_pred eCchhc-----CChHHHHHHHHHHHhhcCCCeEEE
Confidence 211000 00111 22334467789988876
No 497
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.23 E-value=1.6e-07 Score=89.83 Aligned_cols=46 Identities=20% Similarity=0.119 Sum_probs=36.0
Q ss_pred CCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc
Q psy7829 372 HRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS 419 (511)
Q Consensus 372 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~ 419 (511)
.++.+|||||||+|..+..++... ..+|+|+|+++++++.+++++.
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~--~~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSH--FEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGG--CSEEEEECSCHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcChHHHHhhccC--CCeEEEeCCCHHHHHHHHHHHh
Confidence 478899999999999655454433 2699999999999988777543
No 498
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.23 E-value=7.1e-07 Score=86.87 Aligned_cols=102 Identities=20% Similarity=0.255 Sum_probs=64.7
Q ss_pred CCCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhccc----ccccccccccccc-cc-ccchhhhh
Q psy7829 370 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIST----NHIDLIANETIEI-IP-HILDLCYL 443 (511)
Q Consensus 370 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~~----~~v~~i~~d~~~~-l~-~~~d~i~~ 443 (511)
.+.++.+|||+|||+|.++..+++.. ..+|+++|++ .+++.+++++.. ++++++.+|..+. ++ ..+|.++.
T Consensus 35 ~~~~~~~VLDiGcGtG~ls~~la~~g--~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs 111 (328)
T 1g6q_1 35 DLFKDKIVLDVGCGTGILSMFAAKHG--AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIIS 111 (328)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTC--CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEE
T ss_pred hhcCCCEEEEecCccHHHHHHHHHCC--CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEE
Confidence 44678999999999999999998763 2699999999 577777666542 3477887775543 12 34555443
Q ss_pred cccCCcEEEEEcCCccHHHHHHHHHhCCCcEEE
Q psy7829 444 NLHRGAKVLEIGSGSGYLATLMAHLVGPTGHVT 476 (511)
Q Consensus 444 ~l~~~~~vLD~~~g~g~~~~~l~~~l~~~g~v~ 476 (511)
...... +.--.....+...+.+.|+|+|.++
T Consensus 112 ~~~~~~--l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 112 EWMGYF--LLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp CCCBTT--BSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred eCchhh--cccHHHHHHHHHHHHhhcCCCeEEE
Confidence 311000 0000001233445568899999986
No 499
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.23 E-value=7.1e-07 Score=82.23 Aligned_cols=103 Identities=16% Similarity=0.039 Sum_probs=67.9
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHhccCCCcCCCCCeEEEEccCCCCCCCCCCcc
Q psy7829 130 HLVDGAKVLDLGSGSGYQTCVFAHMVGPTGKVIGVEHIPELIEASLRNISKGNKDLLDSGRVRIVEADAREGYLPEAPYD 209 (511)
Q Consensus 130 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 209 (511)
.++++.+|||+|||+|.++..+++.. +...++++|+..++....... .. ...++..+..++.......++||
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvDl~~~pi~~-~~------~g~~ii~~~~~~dv~~l~~~~~D 142 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRDGHEKPMNV-QS------LGWNIITFKDKTDIHRLEPVKCD 142 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTCCCCCCC-CB------TTGGGEEEECSCCTTTSCCCCCS
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEeccCccccccc-Cc------CCCCeEEEeccceehhcCCCCcc
Confidence 36788899999999999999988764 345688888875431000000 00 01145556666433223447899
Q ss_pred EEEecCCCC----ch--------HHHHHhhcccC-cEEEEEEcc
Q psy7829 210 VIYYGGCVS----EV--------PSRVLNQLKKG-GRILAPIGP 240 (511)
Q Consensus 210 ~I~~~~~~~----~~--------~~~~~~~Lkpg-G~l~~~~~~ 240 (511)
+|+++.+.+ ++ ++.+.++|+|| |.+++-+..
T Consensus 143 lVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 143 TLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred EEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 999987665 11 24457899999 999997775
No 500
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.23 E-value=6.8e-07 Score=88.51 Aligned_cols=88 Identities=19% Similarity=0.306 Sum_probs=64.8
Q ss_pred CCCCCEEEEEeccccHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHhhcc-----cccccccccccccccc----ccchhh
Q psy7829 371 LHRGAKVLEIGSGSGYLATLMAHLVGPTGHVTGLEHMMDIAIESIANIS-----TNHIDLIANETIEIIP----HILDLC 441 (511)
Q Consensus 371 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~id~~~~~~~~~~~~~~-----~~~v~~i~~d~~~~l~----~~~d~i 441 (511)
+.+|.+|||+|||+|..++.+|+.. .+|+++|+++.+++.+++|+. ..+++++++|..+.++ ..+|.+
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~g---~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV 167 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSKA---SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYI 167 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTTC---SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEE
T ss_pred cCCCCEEEEeCCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEE
Confidence 3458999999999999999998764 799999999998888877764 4578999999877543 367888
Q ss_pred hhcccC----CcEEEEEcCCccHH
Q psy7829 442 YLNLHR----GAKVLEIGSGSGYL 461 (511)
Q Consensus 442 ~~~l~~----~~~vLD~~~g~g~~ 461 (511)
+.+.+. ++++.++..-...+
T Consensus 168 ~lDPPrr~~~~grv~~led~~P~l 191 (410)
T 3ll7_A 168 YVDPARRSGADKRVYAIADCEPDL 191 (410)
T ss_dssp EECCEEC-----CCCCGGGEESCH
T ss_pred EECCCCcCCCCceEEehhhcCCCH
Confidence 776542 34555554333333
Done!