RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7830
(364 letters)
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 224
Score = 103 bits (258), Expect = 9e-27
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 61 RSYADFLEGLKERKLLNHPRVEEAFYAVRRADFINVKPKFGFCDIPYAFANQVVMEPPSY 120
S+++ + L++ ++ +V E A R+ + + D P + Q + P
Sbjct: 6 ASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYA---KCNPYMDSPQSIGFQATISAPHM 62
Query: 121 IARCLEQLVDHLQNGSRVLDIGSGQGYMATAKEWLSSVRQLL-----LPETLNNSLKNIK 175
A LE L D L G++ LD+GSG G + + + + E +++S+ N++
Sbjct: 63 HAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVR 122
Query: 176 ISRPDLLQSKTLEFILKDARWGHAEGGPYDVIFFGAGTTEVSKTILSQLKPNGRIVAPVG 235
P LL S ++ ++ D R G+AE PYD I GA V + ++ QLKP GR++ PVG
Sbjct: 123 KDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVG 182
Query: 236 NVW-RQNLSVIDKGPDGSISSKILRRVS 262
Q L DK DGSI K L V
Sbjct: 183 PAGGNQMLEQYDKLQDGSIKMKPLMGVI 210
>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 223
Score = 98.0 bits (243), Expect = 1e-24
Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 14/213 (6%)
Query: 61 RSYADFLEGLKERKLLNHPRVEEAFYAVRRADFINVKPKFGFCDIPYAFANQVVMEPPSY 120
+ D + LK+ ++ V +A R + P+ + D P V + P
Sbjct: 10 ANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYS---PRNPYMDAPQPIGGGVTISAPHM 66
Query: 121 IARCLEQLVDHLQNGSRVLDIGSGQGYMATAKEWLSSVRQLLL----------PETLNNS 170
A LE L DHL+ G+R+LD+GSG GY+ + + E + S
Sbjct: 67 HAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRS 126
Query: 171 LKNIKISRPDLLQSKTLEFILKDARWGHAEGGPYDVIFFGAGTTEVSKTILSQLKPNGRI 230
N+ +L S L + D R G+ PY+ I GA + +++QL GR+
Sbjct: 127 KANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLASGGRL 186
Query: 231 VAPVGNVWR-QNLSVIDKGPDGSISSKILRRVS 262
+ PVG Q + DK +G + L V
Sbjct: 187 IVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVM 219
>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 215
Score = 78.0 bits (191), Expect = 2e-17
Identities = 50/199 (25%), Positives = 79/199 (39%), Gaps = 7/199 (3%)
Query: 66 FLEGLKERKLLNHPRVEEAFYAVRRADFI-NVKPKFGFCDIPYAFANQVVMEPPSYIARC 124
+E LK ++ VE AF R + + K+ D P + P +A
Sbjct: 11 TVEMLKAEGIIRSKEVERAFLKYPRYLSVEDKYKKYAHIDEPLPIPAGQTVSAPHMVAIM 70
Query: 125 LEQLVDHLQNGSRVLDIGSGQGYMATAKEWLSSVRQLLLPETLNNSLKNIKISRPDLLQS 184
LE +L+ G +L++G+G G+ A + L +
Sbjct: 71 LEI--ANLKPGMNILEVGTGSGWNAALISEIVKTDVYT--IERIPELVEFAKRNLERAGV 126
Query: 185 KTLEFILKDARWGHAEGGPYDVIFFGAGTTEVSKTILSQLKPNGRIVAPVGNV-WRQNLS 243
K + IL D G PYDVI AG ++ + ++ QLK G+++ PVG+ Q L
Sbjct: 127 KNVHVILGDGSKGFPPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVGSYHLWQELL 186
Query: 244 VIDKGPDGSISSKILRRVS 262
+ K DG I K V+
Sbjct: 187 EVRKTKDG-IKIKNHGGVA 204
>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Sulfolobus tokodaii [TaxId: 111955]}
Length = 224
Score = 71.4 bits (174), Expect = 5e-15
Identities = 40/188 (21%), Positives = 67/188 (35%), Gaps = 7/188 (3%)
Query: 76 LNHPRVEEAFYAVRRADFINVKPK-FGFCDIPYAFANQVVMEPPSYIARCLEQLVDHLQN 134
+ + EAF V R+ F+ K + + A + + L
Sbjct: 11 IKTQELAEAFNKVDRSLFLPENLKDYAYAHTHEALPILPGINTTALNLGIFMLDELDLHK 70
Query: 135 GSRVLDIGSGQGYMATAKEWLSSVRQLLLPETLNNSLKNIKISRPDLLQSKTLEFILKDA 194
G +VL+IG+G GY + ++ + K + L ++ IL D
Sbjct: 71 GQKVLEIGTGIGYYTALIAEIVDK-----VVSVEINEKMYNYASKLLSYYNNIKLILGDG 125
Query: 195 RWGHAEGGPYDVIFFGAGTTEVSKTILSQLKPNGRIVAPVGNVWRQNLSVIDKGPDGSIS 254
G+ E PYD + A + QLK G ++ P+G Q L + K + S
Sbjct: 126 TLGYEEEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPIGVGRVQKLYKVIKKGNS-PS 184
Query: 255 SKILRRVS 262
+ L V
Sbjct: 185 LENLGEVM 192
>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl
O-methyltransferase {Thermotoga maritima [TaxId: 2336]}
Length = 213
Score = 63.1 bits (152), Expect = 3e-12
Identities = 49/206 (23%), Positives = 83/206 (40%), Gaps = 11/206 (5%)
Query: 64 ADFLEGLKERKLLNHPRVEEAFYAVRRADFI--NVKPKFGFCDIPY----AFANQVVMEP 117
LK+ + + + +AF + R +F+ + + + DI
Sbjct: 3 EKLFWILKKYGVSD--HIAKAFLEIPREEFLTKSYPLSYVYEDIVLVSYDDGEEYSTSSQ 60
Query: 118 PSYIARCLEQLVDHLQNGSRVLDIGSGQGYMATAKEWLSSVRQLLLPETLNNSLKNIKIS 177
PS +A +E L G RVL+IG G GY A + + L++ + + I
Sbjct: 61 PSLMALFMEW--VGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKR 118
Query: 178 RPDLLQSKTLEFILKDARWGHAEGGPYDVIFFGAGTTEVSKTILSQLKPNGRIVAPVGNV 237
+ L + + F+ D +G E PYDVIF G EV +T +QLK GR++ P+
Sbjct: 119 NVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPINLK 178
Query: 238 W-RQNLSVIDKGPDGSISSKILRRVS 262
R+ + + K D +
Sbjct: 179 LSRRQPAFLFKKKDPYLVGNYKLETR 204
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT)
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 186
Score = 46.4 bits (109), Expect = 1e-06
Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 5/103 (4%)
Query: 132 LQNGSRVLDIGSGQGYMATAKEWLSSVRQLLLPETLNNSLKNIKISRPDLLQSKTLEFIL 191
+D+G G G + VR++ + ++ +++ + +
Sbjct: 31 PGKNDVAVDVGCGTGGVTLELAG--RVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLME 88
Query: 192 KDARWGHAEGGPYDVIFFGAGTTEV---SKTILSQLKPNGRIV 231
DA + D+ G E+ + I +LKP GRI+
Sbjct: 89 GDAPEALCKIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRII 131
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga
maritima [TaxId: 2336]}
Length = 266
Score = 43.2 bits (101), Expect = 2e-05
Identities = 23/135 (17%), Positives = 42/135 (31%), Gaps = 5/135 (3%)
Query: 118 PSYIARCLEQLVDHLQNGSRVLDIGSGQGYMA-TAKEWLSSVRQLLLPETLNNSLKNIKI 176
P + L ++ G R++D G G G M + S ++ E K +
Sbjct: 89 PKDSSFIAMML--DVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAES 146
Query: 177 SRPDLLQSKTLEFILKDARWGHAEGGPYDVIFFGAGTTEVSKTILSQLKPNGRIVA--PV 234
+ + + ++D G E + LK GR P
Sbjct: 147 NLTKWGLIERVTIKVRDISEGFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCPT 206
Query: 235 GNVWRQNLSVIDKGP 249
N ++ L + + P
Sbjct: 207 TNQVQETLKKLQELP 221
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 264
Score = 37.7 bits (87), Expect = 0.001
Identities = 19/126 (15%), Positives = 40/126 (31%), Gaps = 10/126 (7%)
Query: 118 PSYIARCLEQLVDHLQNGSRVLDIGSGQGYMATAKEWLSSVRQLLL-----PETLNNSLK 172
P A+ + + + G+RVL+ G+G G + + ++ + ++ +
Sbjct: 82 PKDAAQIVHEG--DIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARR 139
Query: 173 NIKISRPDLLQSKTLEFILKDARWGHAEGGPYDVIFFGAGTT-EVSKTILSQLKPNGRIV 231
N+ ++ D G D EV + L G ++
Sbjct: 140 NVSGCYGQP--PDNWRLVVSDLADSELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLM 197
Query: 232 APVGNV 237
V V
Sbjct: 198 VYVATV 203
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 406
Score = 37.0 bits (85), Expect = 0.003
Identities = 23/143 (16%), Positives = 49/143 (34%), Gaps = 20/143 (13%)
Query: 108 AFANQVVME-PPSYIARCLEQLVDHLQNGSRVLDIGSGQG----YMATAKEWLSSVRQLL 162
AF+N V E P++++ +Q L+ G +D+GSG G A S +
Sbjct: 191 AFSNYVYGELLPNFLSDVYQQC--QLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEI 248
Query: 163 LPETLNNSLKNIKISRPDL-LQSKTLEFILKDARWGHAEGGPYDVIF------------F 209
+ + + ++ + + L L + + + + F
Sbjct: 249 MDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFLF 308
Query: 210 GAGTTEVSKTILSQLKPNGRIVA 232
+ + IL K +I++
Sbjct: 309 DEDLNKKVEKILQTAKVGCKIIS 331
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 36.3 bits (83), Expect = 0.004
Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 14/120 (11%)
Query: 132 LQNGSRVLDIGSGQGYMATAKEWLSSVRQLLL-----PETLNNSLKNIKISRPDLLQSKT 186
+ G VL+ GSG G M+ + ++ + + + KN K R S
Sbjct: 96 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHV 155
Query: 187 ------LEFILKDAR--WGHAEGGPYDVIFFGAGT-TEVSKTILSQLKPNGRIVAPVGNV 237
++FI KD + +D + LK G V N+
Sbjct: 156 EEWPDNVDFIHKDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVVNI 215
>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon
Aeropyrum pernix [TaxId: 56636]}
Length = 172
Score = 34.5 bits (78), Expect = 0.009
Identities = 20/125 (16%), Positives = 40/125 (32%), Gaps = 4/125 (3%)
Query: 123 RCLEQLVDHLQNGSRVLDIGSGQ-GYMATAKEWLSSVRQLLLPETLNNSLKNIKISRPDL 181
R +++ L G+ V +G G G++A + + ++ + LK + D
Sbjct: 21 RAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADH 80
Query: 182 LQSKTLEFILKDARWGHAEGGPYDVIFFGAGTTEVSKTILSQLKPNGRIVAPVGNVWRQN 241
+ + + G +V G+ L GR++ VG
Sbjct: 81 VVDARRDPV--KQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLII-VGYGGELR 137
Query: 242 LSVID 246
I
Sbjct: 138 FPTIR 142
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Human (Homo sapiens) [TaxId:
9606]}
Length = 328
Score = 35.2 bits (80), Expect = 0.010
Identities = 29/174 (16%), Positives = 50/174 (28%), Gaps = 25/174 (14%)
Query: 73 RKLLNHPRVEEAFYAVRRADFINVKPKFGFCDIPYAFANQVVMEPPSYIARCLEQLVDHL 132
LL H + + Y D + F Y + +A+ ++++ +
Sbjct: 100 TGLLRH--ILQQVYNHSVTDPEKLNNYEPFSPEVYGETSF------DLVAQMIDEI--KM 149
Query: 133 QNGSRVLDIGSGQG----YMATAKEWLSSVRQLLLPETLNNSLKNIKISRPDL----LQS 184
+ +D+GSG G +A A + + R + +
Sbjct: 150 TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKH 209
Query: 185 KTLEFILKDA-RWGHAEGGP-YDVIF-----FGAGTTEVSKTILSQLKPNGRIV 231
D E VIF FG K + +K GRIV
Sbjct: 210 AEYTLERGDFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIV 263
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli
[TaxId: 562]}
Length = 245
Score = 34.6 bits (78), Expect = 0.011
Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 12/121 (9%)
Query: 118 PSYIARCLEQLVDHLQNGSRVLDIGSGQGYMAT--AKEWLSSVRQLLLPETLNNSLKNIK 175
A L ++ G+R+LD+GSG G M A++ + + + K
Sbjct: 19 EEKYATLGRVL--RMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTA---QAK 73
Query: 176 ISRPDLLQSKTLEFILKDARWGHAEGGPYDVIFFGA-----GTTEVSKTILSQLKPNGRI 230
+L S+ + FI DA A GA G + + LKP G +
Sbjct: 74 RRAEELGVSERVHFIHNDAAGYVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIM 133
Query: 231 V 231
+
Sbjct: 134 L 134
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 250
Score = 34.7 bits (79), Expect = 0.011
Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 6/114 (5%)
Query: 119 SYIARCLEQLVDHLQNGSRVLDIGSGQGYMATA-KEWLSSVRQLLLPETLNNSLKNIKIS 177
SYI L+ G +L++G G G M++ L+ L + E ++LK +
Sbjct: 75 SYIIMRCG-----LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDN 129
Query: 178 RPDLLQSKTLEFILKDARWGHAEGGPYDVIFFGAGTTEVSKTILSQLKPNGRIV 231
+ + D ++ VI + I S +KP
Sbjct: 130 LSEFYDIGNVRTSRSDIADFISDQMYDAVIADIPDPWNHVQKIASMMKPGSVAT 183
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus
halodurans [TaxId: 86665]}
Length = 231
Score = 33.5 bits (75), Expect = 0.026
Identities = 8/29 (27%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 121 IARCLEQLVDHLQNGSRVLDIGSGQGYMA 149
+A+ ++ L+ VLD+ +G G++A
Sbjct: 4 LAKLMQIA--ALKGNEEVLDVATGGGHVA 30
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas
syringae [TaxId: 317]}
Length = 201
Score = 32.0 bits (71), Expect = 0.064
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 5/42 (11%)
Query: 116 EPPSYIARCLEQLVDHLQNGSRVLDIGSGQGYMATAKEWLSS 157
E + + L ++ G+RVL G+ WLS
Sbjct: 4 EVNKDLQQYWSSL--NVVPGARVLVPLCGKSQDM---SWLSG 40
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus
cereus [TaxId: 1396]}
Length = 281
Score = 31.4 bits (70), Expect = 0.14
Identities = 15/118 (12%), Positives = 36/118 (30%), Gaps = 4/118 (3%)
Query: 125 LEQLVDHLQNGSRVLDIGSGQGY----MATAKEWLSSVRQLLLPETLNNSLKNIKISRPD 180
L V + ++D G G GY + S + ETL + + P
Sbjct: 18 LVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY 77
Query: 181 LLQSKTLEFILKDARWGHAEGGPYDVIFFGAGTTEVSKTILSQLKPNGRIVAPVGNVW 238
+ + + + + + + + ++ +K G+I+ +
Sbjct: 78 DSEFLEGDATEIELNDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHWI 135
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase
3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 30.6 bits (68), Expect = 0.29
Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 7/108 (6%)
Query: 131 HLQNGSRVLDIGSGQGYMA------TAKEWLSSVRQLLLPETLNNSLKNIKISRPDLLQS 184
H+ VLD+G G G ++ AK+ L + +L + ++ N L++
Sbjct: 32 HIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKG 91
Query: 185 KTLEFILKDARWGHAEGGPYDVIFFGAGTTEVSKTILSQ-LKPNGRIV 231
K E L + + ++ L G +
Sbjct: 92 KIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 139
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 280
Score = 30.3 bits (67), Expect = 0.30
Identities = 17/136 (12%), Positives = 42/136 (30%), Gaps = 23/136 (16%)
Query: 119 SYIARCLEQLVD---HLQNGSRVLDIGSGQGYMA--TAKEWLSSVRQLLLPET-LNNSLK 172
++ + L ++ ++ ++L IG G G + + + + + + S +
Sbjct: 22 EFMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAE 81
Query: 173 NIKISRPDLLQSKTLEFILKDARWGHA-----------EGGPYDVIFFGAGT------TE 215
I + + + LE + + E +D I
Sbjct: 82 QIAKYKELVAKISNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPA 141
Query: 216 VSKTILSQLKPNGRIV 231
K S L N +++
Sbjct: 142 TLKFFHSLLGTNAKML 157
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis
[TaxId: 1423]}
Length = 234
Score = 30.3 bits (67), Expect = 0.31
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 125 LEQLVDH--LQNGSRVLDIGSGQGYMA 149
L ++ + RVLDIG+G G+ A
Sbjct: 5 LGLMIKTAECRAEHRVLDIGAGAGHTA 31
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389
{Thermotoga maritima [TaxId: 2336]}
Length = 246
Score = 30.1 bits (66), Expect = 0.33
Identities = 26/139 (18%), Positives = 47/139 (33%), Gaps = 10/139 (7%)
Query: 120 YIARCLEQLVDHLQNGSRVLDIGSGQGYMATAKEWLSSVRQLLLPETLNNSLKNIKISRP 179
Y L ++L+N RVLD+G G G + + L + K +
Sbjct: 28 YHRLIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQERGF------EVVLVDPSKEMLEVAR 81
Query: 180 DLLQSKTLEFILKDARWGHAEGGPYDVIFFGAGTTEVSKTILSQ----LKPNGRIVAPVG 235
+ +E +D + + E S+ L P+G ++A V
Sbjct: 82 EKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVD 141
Query: 236 NVWRQNLSVIDKGPDGSIS 254
N + +I+K I+
Sbjct: 142 NFYTFLQQMIEKDAWDQIT 160
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 246
Score = 30.0 bits (66), Expect = 0.40
Identities = 6/32 (18%), Positives = 13/32 (40%)
Query: 118 PSYIARCLEQLVDHLQNGSRVLDIGSGQGYMA 149
+ +E+ V++ LD+ G G +
Sbjct: 21 KKWSDFIIEKCVENNLVFDDYLDLACGTGNLT 52
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus
jannaschii [TaxId: 2190]}
Length = 230
Score = 29.7 bits (66), Expect = 0.46
Identities = 6/29 (20%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 121 IARCLEQLVDHLQNGSRVLDIGSGQGYMA 149
I + L+ + ++ S++L +G+ G
Sbjct: 63 IIKGLKVM--PIKRDSKILYLGASAGTTP 89
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB
{Salmonella typhimurium [TaxId: 90371]}
Length = 198
Score = 29.2 bits (64), Expect = 0.55
Identities = 17/139 (12%), Positives = 35/139 (25%), Gaps = 6/139 (4%)
Query: 131 HLQNGSRVLDIGSGQGYMATAKEWLSSVRQLLLPETLNNSLKNIKISRPDLLQSKTLEFI 190
+ R LD+G G G + + + + L +T
Sbjct: 27 KVVAPGRTLDLGCGNGRNSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVD 86
Query: 191 LKDARWGHAEGGPYDVIFFGAGTTEVSKTILSQ----LKPNGRIVAPVGNVWRQNLSVID 246
L + + + +++ KP G + V + +
Sbjct: 87 LNTLTFDGEYDFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLI-VAAMDTPDFPC-T 144
Query: 247 KGPDGSISSKILRRVSSDF 265
G + LRR +
Sbjct: 145 VGFPFAFKEGELRRYYEGW 163
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase
DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Length = 222
Score = 29.0 bits (64), Expect = 0.66
Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 3/93 (3%)
Query: 156 SSVRQLLLPETLNNSLKNIKISRPDLLQSKTLEFILKDA-RWGHAEGGPYDVIFFGAGTT 214
+ + L E L + +P +Q + ++ I+K ++ G +
Sbjct: 17 PTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA--TFSIS 74
Query: 215 EVSKTILSQLKPNGRIVAPVGNVWRQNLSVIDK 247
+ + + I+AP + Q +
Sbjct: 75 VLQCLDIQVRETQALILAPTRELAVQIQKGLLA 107
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 292
Score = 29.1 bits (64), Expect = 0.81
Identities = 16/125 (12%), Positives = 30/125 (24%), Gaps = 20/125 (16%)
Query: 126 EQLVDHLQ--NGSRVLDIGSGQGYMATA--------------KEWLSSVRQLLLPETLNN 169
L+ L+ RVLD+ G G + + L +
Sbjct: 46 AWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEP 105
Query: 170 SLKNIKISRPDLLQSKTLEFILKDARWGHAEGGPYDVIFFGAGTTEVSKTILSQ----LK 225
+ I + L G + + G + L ++
Sbjct: 106 AFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVR 165
Query: 226 PNGRI 230
P G +
Sbjct: 166 PGGLL 170
>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 229
Score = 28.8 bits (63), Expect = 0.86
Identities = 20/190 (10%), Positives = 45/190 (23%), Gaps = 29/190 (15%)
Query: 116 EPPSYIARCLEQLVDHLQNGSRVLDIGSG----------QGYMATAKEW----LSSVRQL 161
+ + + L+ + ++G RV G +G+ E +
Sbjct: 28 QGHQLLKKHLDTFLK-GKSGLRVFFPLCGKAVEMKWFADRGHSVVGVEISELGIQEFFTE 86
Query: 162 LLPETLNNSLKNIKISRPDLLQSKTLEFILKDARWGHAEGGPYDVIFFGAGTT------- 214
+ I ++ S + + + G
Sbjct: 87 QNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFDLPRTNIGKFDMIWDRGALVAINPGD 146
Query: 215 --EVSKTILSQLKPNGRIVAPVGNVWRQNLSVIDKGPDGSISSKILRRVSSDFLCNLEYQ 272
+ T+ S L + + GP + + R+ CN+
Sbjct: 147 RKCYADTMFSLLGKKFQYLL----CVLSYDPTKHPGPPFYVPHAEIERLFGKI-CNIRCL 201
Query: 273 LHPDVFPQPL 282
D F +
Sbjct: 202 EKVDAFEERH 211
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538
{Streptococcus pyogenes [TaxId: 1314]}
Length = 152
Score = 28.3 bits (62), Expect = 1.0
Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 7/105 (6%)
Query: 134 NGSRVLDIGSGQGYMATAK-----EWLSSVRQLLLPETLNNSLKNIKISRPDLLQSKTLE 188
NG RVLD+ +G G +A V + + + + + K
Sbjct: 14 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEA 73
Query: 189 FILKDARWGHAEGGPYDVIFFGAGTTEVSKTILSQ--LKPNGRIV 231
D G + D + + + ++ L +V
Sbjct: 74 ERAIDCLTGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVV 118
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase
{Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Length = 252
Score = 28.4 bits (62), Expect = 1.1
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 120 YIARCLEQLVDHLQNGSRVLDIGSGQGYMA 149
+I CL +L + + G VLD+G G+G
Sbjct: 12 FIKACLIRL--YTKRGDSVLDLGCGKGGDL 39
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 251
Score = 28.2 bits (61), Expect = 1.4
Identities = 9/51 (17%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Query: 104 DIPYAFANQVVMEPPSYIARCLEQLVDHLQNGSRVLDIGSGQGYMATAKEW 154
D Y + V ++ ++ + RVLD+ G G
Sbjct: 13 DTIYRRRIERVKAEIDFVEEIFKED--AKREVRRVLDLACGTGIPTLELAE 61
>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon
Methanococcus jannaschii [TaxId: 2190]}
Length = 194
Score = 27.7 bits (60), Expect = 1.6
Identities = 21/143 (14%), Positives = 46/143 (32%), Gaps = 13/143 (9%)
Query: 104 DIPYAFANQVVMEPPSYIARCLEQLVDHL--QNGSRVLDIGSGQGYMATA--KEWLSSVR 159
F + + + + LV+++ +LD+G G G + A E S+
Sbjct: 20 GKKLKFKTDSGVFSYGKVDKGTKILVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTM 79
Query: 160 QLLLPETLNNSLKNIKISRPDLLQSKTLEFILKDARWGHAEGGPYDVIFFGA------GT 213
+ + + +NIK++ + + + D + +I
Sbjct: 80 ADINRRAIKLAKENIKLNNL---DNYDIRVVHSDLYENVKDRKYNKIITNPPIRAGKEVL 136
Query: 214 TEVSKTILSQLKPNGRIVAPVGN 236
+ + LK NG I +
Sbjct: 137 HRIIEEGKELLKDNGEIWVVIQT 159
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia
carotovora [TaxId: 554]}
Length = 225
Score = 28.0 bits (61), Expect = 1.6
Identities = 5/26 (19%), Positives = 11/26 (42%), Gaps = 1/26 (3%)
Query: 124 CLEQLVDHLQNGSRVLDIGSGQGYMA 149
+ + G +L++GS +G
Sbjct: 11 MVRAFTPFFRPG-NLLELGSFKGDFT 35
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain
{Thermus aquaticus [TaxId: 271]}
Length = 223
Score = 27.7 bits (60), Expect = 1.7
Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 118 PSYIARCLEQLVDHLQNGSRVLDIGSGQGYMATA 151
P + + L + G RVL+ G A
Sbjct: 4 PPEVVDFMVSLAE-APRGGRVLEPACAHGPFLRA 36
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate
oxidase 1 {Petunia hybrida [TaxId: 4102]}
Length = 307
Score = 28.0 bits (61), Expect = 1.7
Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 15/79 (18%)
Query: 11 ERCVLAVFFILVSRGQGWKPDPGMPIEPPPDLRSEMYDEDNENEENFFYTRSYADFLEGL 70
R LA F+ P I P P + +++ E + + + D+++
Sbjct: 242 ARMSLASFY---------NPGSDAVIYPAP----ALVEKEAEENKQVYPKFVFDDYMKLY 288
Query: 71 KERKLLN-HPRVEEAFYAV 88
K PR EA A+
Sbjct: 289 AGLKFQAKEPRF-EAMKAM 306
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga
maritima [TaxId: 2336]}
Length = 182
Score = 27.6 bits (60), Expect = 1.9
Identities = 14/104 (13%), Positives = 29/104 (27%), Gaps = 3/104 (2%)
Query: 131 HLQNGSRVLDIGSGQGYMATAKEWLSSVRQLLLPETLNNSLKNIKISRPDLLQSKTLEFI 190
G V+ G+G + S + ++ + + + L E
Sbjct: 25 ESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETS 84
Query: 191 LKDARWGHAE---GGPYDVIFFGAGTTEVSKTILSQLKPNGRIV 231
+++ R + G D I G + L+ G
Sbjct: 85 VEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYS 128
>d1l0wa2 d.74.4.1 (A:295-414) Prokaryotic AspRS, insert domain
{Thermus thermophilus, AspRS-1 [TaxId: 274]}
Length = 120
Score = 26.8 bits (59), Expect = 2.0
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 205 DVIFFGAGTTEVSKTILSQL 224
D + F AG +V+ T L +
Sbjct: 90 DTLLFVAGPRKVAATALGAV 109
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase
TM1293 {Thermotoga maritima [TaxId: 2336]}
Length = 208
Score = 27.4 bits (59), Expect = 2.2
Identities = 8/34 (23%), Positives = 11/34 (32%)
Query: 115 MEPPSYIARCLEQLVDHLQNGSRVLDIGSGQGYM 148
+ Q V L R ++IG G G
Sbjct: 17 FLVHRFAYLSELQAVKCLLPEGRGVEIGVGTGRF 50
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 316
Score = 27.4 bits (60), Expect = 2.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 131 HLQNGSRVLDIGSGQGYMA 149
HL VLD+GSG G +
Sbjct: 30 HLFKDKVVLDVGSGTGILC 48
>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus
thermophilus [TaxId: 274]}
Length = 171
Score = 27.2 bits (59), Expect = 2.5
Identities = 20/120 (16%), Positives = 37/120 (30%), Gaps = 10/120 (8%)
Query: 122 ARCLEQLVDHLQ----NGSRVLDIGSGQGYMATAKEWLSSVRQLLLPETLNNSLKNIKIS 177
R + L D+L+ R LD +G G + L+ + L +
Sbjct: 25 VRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVR 84
Query: 178 RPDLLQSKTLEFILKDARWGHAEGGPYDVIF----FGAGTTEVSKTILSQ--LKPNGRIV 231
R L + A+G + V F + + +L+ ++ G V
Sbjct: 85 RTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYV 144
>d1c0aa2 d.74.4.1 (A:288-420) Prokaryotic AspRS, insert domain
{Escherichia coli [TaxId: 562]}
Length = 133
Score = 26.9 bits (59), Expect = 2.5
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 205 DVIFFGAGTTEVSKTILSQL 224
D+IFFGA ++ + L
Sbjct: 103 DMIFFGADNKKIVADAMGAL 122
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 328
Score = 27.5 bits (60), Expect = 2.6
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 131 HLQNGSRVLDIGSGQGYMA 149
L VLD+G G G ++
Sbjct: 35 DLFKDKIVLDVGCGTGILS 53
>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas
vaginalis, MGL2 [TaxId: 5722]}
Length = 331
Score = 27.5 bits (60), Expect = 2.8
Identities = 4/34 (11%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 200 EGGPYDVIFFGAGTTEVSKTILSQLKPNGRIVAP 233
E +G ++ ++ + LK +++
Sbjct: 11 EHA-EACAATASGMGAIAASVWTFLKAGDHLISD 43
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 208
Score = 26.9 bits (59), Expect = 2.8
Identities = 10/41 (24%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 153 EWLSSVRQLLLPETLNNSLKNIKISRPDLLQSKTLEFILKD 193
E+++ +L L + + N+++N +P +Q K + L D
Sbjct: 2 EYMN-FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLND 41
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus
fulgidus [TaxId: 2234]}
Length = 209
Score = 27.0 bits (59), Expect = 3.0
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 131 HLQNGSRVLDIGSGQGYMATA 151
L+ RVL +G+ G +
Sbjct: 53 KLRGDERVLYLGAASGTTVSH 73
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 309
Score = 27.1 bits (59), Expect = 3.7
Identities = 12/88 (13%), Positives = 31/88 (35%), Gaps = 3/88 (3%)
Query: 125 LEQLVDHLQNGSRVLDIGSGQGYMATAKEWLSSVRQLL--LPETLNNSLKNIKISRPDLL 182
L+ V+ +VL++ G + + + + + + +N ++ +
Sbjct: 123 LKNAVETADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQA 182
Query: 183 QSK-TLEFILKDARWGHAEGGPYDVIFF 209
+ E +K + G YD+I
Sbjct: 183 PIRWICEDAMKFIQREERRGSTYDIILT 210
>d2d6fc2 d.74.4.1 (C:271-395) Glutamyl-tRNA(gln) amidotransferase
subunit E, GatE, insert domain {Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 125
Score = 26.1 bits (57), Expect = 4.0
Identities = 3/56 (5%), Positives = 15/56 (26%), Gaps = 5/56 (8%)
Query: 169 NSLKNIKISRPDLLQSKTLEFILKDARWGHAEGGPYDVIFFGAGTTEVSKTILSQL 224
+ + + + + + + D + A ++ L ++
Sbjct: 64 SGIFHTDELPAYGITEEEVRGLRD-----AVGASQGDAVVMVAHERVTAENALREV 114
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 209
Score = 26.6 bits (57), Expect = 4.1
Identities = 4/38 (10%), Positives = 16/38 (42%)
Query: 156 SSVRQLLLPETLNNSLKNIKISRPDLLQSKTLEFILKD 193
+ + + ++K ++ +P +Q + + L+
Sbjct: 1 TQFTRFPFQPFIIEAIKTLRFYKPTEIQERIIPGALRG 38
>d1wura1 d.96.1.1 (A:32-216) GTP cyclohydrolase I {Thermus
thermophilus [TaxId: 274]}
Length = 185
Score = 26.1 bits (57), Expect = 5.4
Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 18/126 (14%)
Query: 61 RSYADFLEGLKE---RK-LLNHP-RVEEAFYAVRRADFINVKPKFGFCDIPYAFANQVVM 115
A++L+ + E R+ LL P RV +A+ + R ++ G P + VV+
Sbjct: 9 ALAAEWLQVIGEDPGREGLLKTPERVAKAWAFLTRGYRQRLEEVVGGAVFPAEGSEMVVV 68
Query: 116 EPPSYIARCLEQLVDHLQNGSRVLDIG-------SGQGYMATAKEWLSSVRQLLLPETLN 168
+ + + C HL + IG G A + + R+L + E L
Sbjct: 69 KGVEFYSMCE----HHLLPFFGKVHIGYIPDGKILGLSKFARIVDMFA--RRLQVQERLA 122
Query: 169 NSLKNI 174
+
Sbjct: 123 VQIAEA 128
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase
DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 206
Score = 26.1 bits (56), Expect = 5.6
Identities = 4/38 (10%), Positives = 12/38 (31%)
Query: 156 SSVRQLLLPETLNNSLKNIKISRPDLLQSKTLEFILKD 193
++ L L + +P +Q + + +
Sbjct: 1 NTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITG 38
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia
coli [TaxId: 562]}
Length = 268
Score = 26.1 bits (56), Expect = 6.2
Identities = 18/116 (15%), Positives = 36/116 (31%), Gaps = 12/116 (10%)
Query: 120 YIARCLEQLVDHL-----QNGSRVLDIGSGQGYMATAKEWLSSVRQLLLPETLNNSLKNI 174
+ + +V L + VLDIG G+GY + + L T +
Sbjct: 65 HYQPLRDAIVAQLRERLDDKATAVLDIGCGEGY------YTHAFADALPEITTFGLDVSK 118
Query: 175 KISRPDLLQSKTLEFILKDARWGHAEGGPYDVIFFGAGTTEVSKTILSQLKPNGRI 230
+ + + F + + D I ++ + +KP G +
Sbjct: 119 VAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIR-IYAPCKAEELARVVKPGGWV 173
>d1ej5a_ a.68.1.1 (A:) Wiscott-Aldrich syndrome protein, WASP,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 25.1 bits (55), Expect = 6.8
Identities = 7/30 (23%), Positives = 11/30 (36%)
Query: 163 LPETLNNSLKNIKISRPDLLQSKTLEFILK 192
L L + IS L ++T + I
Sbjct: 22 LDPDLRSLFSRAGISEAQLTDAETSKLIYD 51
>d1p4ea2 d.163.1.1 (A:136-422) Flp recombinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 26.1 bits (57), Expect = 6.9
Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
Query: 305 VTFPLSSQERSPGNGSTKKYE--FLPES---TEDRYI---FPQHILDILHGPNKTKSRHV 356
+ P+ + GN S+ K E L ++ + ++ + P I I +GP RH+
Sbjct: 116 NSEPVLKRVNRTGNSSSNKQEYQLLKDNLVRSYNKALKKNAPYPIFAIKNGPKSHIGRHL 175
Query: 357 QS 358
+
Sbjct: 176 MT 177
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria
monocytogenes [TaxId: 1639]}
Length = 328
Score = 26.1 bits (56), Expect = 8.0
Identities = 7/37 (18%), Positives = 14/37 (37%), Gaps = 3/37 (8%)
Query: 118 PSYIARCLEQLVDHL---QNGSRVLDIGSGQGYMATA 151
P I + L++ + + +LD G + T
Sbjct: 98 PDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTT 134
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 206
Score = 25.7 bits (55), Expect = 8.2
Identities = 5/38 (13%), Positives = 13/38 (34%)
Query: 156 SSVRQLLLPETLNNSLKNIKISRPDLLQSKTLEFILKD 193
+ L L + + +P +Q +++ L
Sbjct: 3 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSG 40
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO)
{Haemophilus influenzae [TaxId: 727]}
Length = 225
Score = 25.9 bits (55), Expect = 8.3
Identities = 9/40 (22%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Query: 118 PSY--IARCLEQLVD-HLQNGSRVLDIGSGQGYMATAKEW 154
P Y I + L + + S V D+G +G +
Sbjct: 20 PGYSNIITAIGMLAERFVTADSNVYDLGCSRGAATLSARR 59
>d1ftra2 d.58.33.1 (A:149-296)
Formylmethanofuran:tetrahydromethanopterin
formyltransferase {Archaeon Methanopyrus kandleri
[TaxId: 2320]}
Length = 148
Score = 25.0 bits (55), Expect = 9.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 314 RSPGNGSTKKYEFLPESTEDRY 335
S +K+Y+FLP ST D Y
Sbjct: 58 ASASKVGSKQYDFLPASTNDAY 79
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 226
Score = 25.5 bits (54), Expect = 9.3
Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 12/121 (9%)
Query: 119 SYIARCLEQLVDHLQNGSRVLDIGSGQGYMATAKEWLSSVRQLLLPETLNNSLKNIKISR 178
S I L+ +++ +VLD+ G G + E + K
Sbjct: 22 SRIETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGFEVVG----VDISEDMIRKARE 77
Query: 179 PDLLQSKTLEFILKDARWGHAEGGPYDVIFFGAGTTEVS--------KTILSQLKPNGRI 230
+ +EFI+ DAR E +D + F K + LKP+G+
Sbjct: 78 YAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKF 137
Query: 231 V 231
+
Sbjct: 138 I 138
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo
sapiens) [TaxId: 9606]}
Length = 218
Score = 25.6 bits (55), Expect = 9.9
Identities = 7/38 (18%), Positives = 15/38 (39%)
Query: 156 SSVRQLLLPETLNNSLKNIKISRPDLLQSKTLEFILKD 193
S + L E+L + +P +Q + + +K
Sbjct: 12 DSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKG 49
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 197
Score = 25.5 bits (55), Expect = 9.9
Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Query: 118 PSYIARCLEQLVDHLQN--GSRVLDIGSGQGYMAT--AKEWLSSVRQLLL-PETLNNSLK 172
+ A + + N G V+D G+G G +A SV + P+ + + +
Sbjct: 30 DASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKR 89
Query: 173 NIK 175
N
Sbjct: 90 NCG 92
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.138 0.418
Gapped
Lambda K H
0.267 0.0452 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,403,570
Number of extensions: 68025
Number of successful extensions: 294
Number of sequences better than 10.0: 1
Number of HSP's gapped: 278
Number of HSP's successfully gapped: 60
Length of query: 364
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 278
Effective length of database: 1,226,816
Effective search space: 341054848
Effective search space used: 341054848
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.9 bits)