Query psy7834
Match_columns 492
No_of_seqs 494 out of 5613
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 20:04:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7834.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7834hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lbf_A Protein-L-isoaspartate 99.9 8.3E-22 2.9E-26 181.8 16.2 170 142-321 10-179 (210)
2 2yxe_A Protein-L-isoaspartate 99.9 4.6E-21 1.6E-25 177.5 15.7 172 142-320 9-181 (215)
3 1r18_A Protein-L-isoaspartate( 99.9 3.7E-21 1.3E-25 179.8 13.4 173 142-318 18-196 (227)
4 2pbf_A Protein-L-isoaspartate 99.8 7.1E-21 2.4E-25 177.8 14.7 173 142-318 14-195 (227)
5 1jg1_A PIMT;, protein-L-isoasp 99.8 4.1E-20 1.4E-24 173.7 16.4 170 142-320 23-193 (235)
6 1i1n_A Protein-L-isoaspartate 99.8 1.1E-19 3.8E-24 169.6 16.2 175 142-320 11-186 (226)
7 1dl5_A Protein-L-isoaspartate 99.8 5.8E-20 2E-24 180.5 13.1 169 143-319 5-178 (317)
8 1vbf_A 231AA long hypothetical 99.8 3.9E-19 1.3E-23 166.4 13.5 155 154-320 13-169 (231)
9 3v97_A Ribosomal RNA large sub 99.8 1.4E-17 4.7E-22 179.3 22.6 105 209-318 537-659 (703)
10 4gek_A TRNA (CMO5U34)-methyltr 99.7 1.1E-17 3.8E-22 159.1 13.9 114 197-316 56-178 (261)
11 3lbf_A Protein-L-isoaspartate 99.7 2E-16 6.8E-21 145.6 10.1 127 1-146 29-159 (210)
12 2pbf_A Protein-L-isoaspartate 99.7 1.6E-16 5.5E-21 148.1 8.9 137 1-146 34-178 (227)
13 4hg2_A Methyltransferase type 99.7 1.1E-16 3.7E-21 151.8 7.4 102 201-316 29-135 (257)
14 1nkv_A Hypothetical protein YJ 99.6 7.3E-16 2.5E-20 146.3 12.4 114 194-316 21-140 (256)
15 3e05_A Precorrin-6Y C5,15-meth 99.6 4.8E-15 1.7E-19 135.7 16.6 118 193-318 24-144 (204)
16 1pjz_A Thiopurine S-methyltran 99.6 3.8E-16 1.3E-20 143.1 9.1 104 209-315 20-139 (203)
17 3njr_A Precorrin-6Y methylase; 99.6 4.9E-15 1.7E-19 135.7 16.5 119 191-319 37-157 (204)
18 4df3_A Fibrillarin-like rRNA/T 99.6 1.2E-15 4.1E-20 141.2 12.2 102 208-316 74-182 (233)
19 1vl5_A Unknown conserved prote 99.6 9.9E-16 3.4E-20 145.8 12.0 108 199-316 27-140 (260)
20 3mti_A RRNA methylase; SAM-dep 99.6 1.5E-15 5.1E-20 136.8 12.3 112 199-318 10-137 (185)
21 1r18_A Protein-L-isoaspartate( 99.6 2.4E-16 8.1E-21 147.1 7.0 137 1-146 38-179 (227)
22 3dh0_A SAM dependent methyltra 99.6 1.6E-15 5.4E-20 140.4 12.0 112 199-317 27-144 (219)
23 3hm2_A Precorrin-6Y C5,15-meth 99.6 3E-15 1E-19 133.7 12.7 120 191-318 7-129 (178)
24 3fpf_A Mtnas, putative unchara 99.6 5.3E-15 1.8E-19 141.0 14.6 103 208-318 119-224 (298)
25 2b25_A Hypothetical protein; s 99.6 3E-15 1E-19 148.1 13.2 141 178-320 74-223 (336)
26 1i1n_A Protein-L-isoaspartate 99.6 1.3E-15 4.5E-20 141.8 10.0 136 2-146 32-167 (226)
27 3jwh_A HEN1; methyltransferase 99.6 3.7E-15 1.3E-19 137.8 12.7 116 197-315 17-140 (217)
28 3dlc_A Putative S-adenosyl-L-m 99.6 3.3E-15 1.1E-19 137.8 12.1 111 198-317 33-149 (219)
29 1xxl_A YCGJ protein; structura 99.6 3.4E-15 1.1E-19 140.4 12.2 112 195-316 7-124 (239)
30 2gb4_A Thiopurine S-methyltran 99.6 2.3E-15 7.9E-20 142.3 11.1 104 209-315 66-190 (252)
31 3kkz_A Uncharacterized protein 99.6 2.9E-15 1E-19 143.2 11.8 113 197-316 33-150 (267)
32 2o57_A Putative sarcosine dime 99.6 5.6E-15 1.9E-19 143.5 13.4 114 198-317 67-188 (297)
33 3eey_A Putative rRNA methylase 99.6 6.2E-15 2.1E-19 134.1 12.7 106 208-317 19-140 (197)
34 3f4k_A Putative methyltransfer 99.6 4E-15 1.4E-19 141.2 11.9 114 196-316 32-150 (257)
35 3bus_A REBM, methyltransferase 99.6 5.1E-15 1.7E-19 141.9 12.3 102 209-316 59-166 (273)
36 2yxe_A Protein-L-isoaspartate 99.6 2E-15 6.9E-20 139.4 9.1 130 1-146 29-162 (215)
37 3jwg_A HEN1, methyltransferase 99.6 5.6E-15 1.9E-19 136.8 12.1 117 196-315 16-140 (219)
38 3l8d_A Methyltransferase; stru 99.6 3.2E-15 1.1E-19 140.5 9.3 107 201-318 43-155 (242)
39 3g5t_A Trans-aconitate 3-methy 99.6 1.2E-14 4.2E-19 141.3 13.1 104 209-315 34-148 (299)
40 3dr5_A Putative O-methyltransf 99.6 8.5E-15 2.9E-19 135.8 11.5 99 212-314 57-161 (221)
41 3ujc_A Phosphoethanolamine N-m 99.6 5.6E-15 1.9E-19 140.8 10.5 99 209-316 53-159 (266)
42 1yzh_A TRNA (guanine-N(7)-)-me 99.6 2.5E-14 8.6E-19 132.0 14.3 103 210-318 40-158 (214)
43 3dtn_A Putative methyltransfer 99.6 8.3E-15 2.8E-19 137.0 11.1 100 209-317 42-149 (234)
44 2yqz_A Hypothetical protein TT 99.6 9E-15 3.1E-19 139.2 11.4 111 196-315 21-140 (263)
45 3hem_A Cyclopropane-fatty-acyl 99.6 1.8E-14 6.2E-19 140.3 13.7 99 209-316 70-183 (302)
46 3id6_C Fibrillarin-like rRNA/T 99.6 2E-14 6.7E-19 133.4 13.0 115 196-317 60-182 (232)
47 1ve3_A Hypothetical protein PH 99.6 2.8E-14 9.4E-19 132.6 14.1 112 198-318 25-144 (227)
48 1nt2_A Fibrillarin-like PRE-rR 99.6 1.8E-14 6.3E-19 132.5 12.4 100 209-316 55-161 (210)
49 3gu3_A Methyltransferase; alph 99.6 1.2E-14 4E-19 140.4 11.2 116 195-318 7-128 (284)
50 3mgg_A Methyltransferase; NYSG 99.6 9.4E-15 3.2E-19 140.3 10.5 103 209-317 35-143 (276)
51 2p7i_A Hypothetical protein; p 99.6 7.8E-15 2.7E-19 138.2 9.7 107 198-318 30-143 (250)
52 3ntv_A MW1564 protein; rossman 99.6 1.4E-14 4.7E-19 135.5 11.2 116 193-315 55-175 (232)
53 4dcm_A Ribosomal RNA large sub 99.6 1.3E-13 4.6E-18 137.7 19.0 254 45-317 28-335 (375)
54 4fsd_A Arsenic methyltransfera 99.6 1.2E-14 3.9E-19 146.5 11.2 106 209-316 81-203 (383)
55 3p9n_A Possible methyltransfer 99.6 2.5E-14 8.4E-19 129.3 12.3 118 194-318 26-155 (189)
56 3vc1_A Geranyl diphosphate 2-C 99.6 4.1E-14 1.4E-18 138.4 14.9 102 209-316 115-221 (312)
57 4htf_A S-adenosylmethionine-de 99.5 1.5E-14 5E-19 139.7 11.4 102 210-318 67-175 (285)
58 3mb5_A SAM-dependent methyltra 99.5 6E-14 2.1E-18 133.0 15.4 122 191-319 75-197 (255)
59 3dxy_A TRNA (guanine-N(7)-)-me 99.5 1E-14 3.6E-19 134.9 9.6 104 210-319 33-153 (218)
60 3htx_A HEN1; HEN1, small RNA m 99.5 3.9E-14 1.3E-18 149.8 14.9 138 178-318 687-836 (950)
61 3g07_A 7SK snRNA methylphospha 99.5 1E-14 3.4E-19 141.4 9.8 114 202-316 37-220 (292)
62 3hnr_A Probable methyltransfer 99.5 2.1E-14 7.1E-19 132.9 11.5 104 199-317 35-146 (220)
63 1jg1_A PIMT;, protein-L-isoasp 99.5 1.2E-14 4E-19 136.3 9.8 127 1-146 43-174 (235)
64 1dl5_A Protein-L-isoaspartate 99.5 1.1E-14 3.8E-19 142.8 10.0 130 1-146 22-160 (317)
65 2p35_A Trans-aconitate 2-methy 99.5 9.3E-15 3.2E-19 138.8 9.2 97 209-317 31-133 (259)
66 2p8j_A S-adenosylmethionine-de 99.5 3.4E-14 1.2E-18 130.3 12.4 110 199-317 12-129 (209)
67 2fca_A TRNA (guanine-N(7)-)-me 99.5 3.4E-14 1.2E-18 131.0 12.3 103 210-318 37-155 (213)
68 3ofk_A Nodulation protein S; N 99.5 1E-14 3.4E-19 134.7 8.7 99 209-318 49-156 (216)
69 3kr9_A SAM-dependent methyltra 99.5 2E-14 6.9E-19 132.2 10.5 111 202-317 6-120 (225)
70 3ocj_A Putative exported prote 99.5 7.9E-15 2.7E-19 143.1 8.0 110 203-317 110-228 (305)
71 3lec_A NADB-rossmann superfami 99.5 2.5E-14 8.6E-19 131.8 10.7 111 202-317 12-126 (230)
72 3fzg_A 16S rRNA methylase; met 99.5 1.4E-14 4.7E-19 128.0 8.5 105 202-314 40-150 (200)
73 3g5l_A Putative S-adenosylmeth 99.5 3.2E-14 1.1E-18 134.7 11.7 98 211-318 44-147 (253)
74 1i9g_A Hypothetical protein RV 99.5 6E-14 2.1E-18 134.9 13.7 128 188-320 78-207 (280)
75 3iv6_A Putative Zn-dependent a 99.5 2E-14 6.9E-19 135.8 10.0 109 198-318 34-150 (261)
76 1kpg_A CFA synthase;, cyclopro 99.5 4.7E-14 1.6E-18 136.2 12.9 100 209-317 62-169 (287)
77 3evz_A Methyltransferase; NYSG 99.5 7.1E-14 2.4E-18 130.3 13.6 103 208-318 52-181 (230)
78 3sm3_A SAM-dependent methyltra 99.5 3.5E-14 1.2E-18 132.6 11.3 107 208-317 27-142 (235)
79 3u81_A Catechol O-methyltransf 99.5 2.6E-14 9E-19 132.6 10.4 103 209-315 56-169 (221)
80 2pwy_A TRNA (adenine-N(1)-)-me 99.5 1.6E-13 5.5E-18 130.2 15.9 123 190-319 77-201 (258)
81 3ou2_A SAM-dependent methyltra 99.5 6E-14 2.1E-18 129.4 12.6 106 199-318 35-148 (218)
82 3gnl_A Uncharacterized protein 99.5 3.2E-14 1.1E-18 132.1 10.6 111 202-317 12-126 (244)
83 3grz_A L11 mtase, ribosomal pr 99.5 5.4E-14 1.8E-18 128.7 12.1 112 196-316 45-159 (205)
84 2pxx_A Uncharacterized protein 99.5 6.3E-14 2.2E-18 128.9 12.4 111 200-319 31-162 (215)
85 3tfw_A Putative O-methyltransf 99.5 5.1E-14 1.7E-18 133.0 11.9 112 199-315 52-169 (248)
86 2xvm_A Tellurite resistance pr 99.5 5.3E-14 1.8E-18 127.8 11.6 106 200-316 23-136 (199)
87 1xtp_A LMAJ004091AAA; SGPP, st 99.5 3.5E-14 1.2E-18 134.4 10.7 100 209-317 91-198 (254)
88 3e23_A Uncharacterized protein 99.5 3.5E-14 1.2E-18 130.6 10.1 99 206-319 38-144 (211)
89 1vbf_A 231AA long hypothetical 99.5 1.6E-14 5.5E-19 134.8 7.8 125 1-146 20-150 (231)
90 3ccf_A Cyclopropane-fatty-acyl 99.5 3.1E-14 1.1E-18 136.9 10.0 103 200-318 48-156 (279)
91 3duw_A OMT, O-methyltransferas 99.5 5.1E-14 1.8E-18 130.7 11.1 112 199-315 47-166 (223)
92 3r3h_A O-methyltransferase, SA 99.5 8.5E-15 2.9E-19 137.8 5.7 103 209-315 58-169 (242)
93 3bkx_A SAM-dependent methyltra 99.5 5.3E-14 1.8E-18 134.9 11.4 112 200-317 34-160 (275)
94 3pfg_A N-methyltransferase; N, 99.5 3.7E-14 1.3E-18 135.1 9.9 105 198-316 37-151 (263)
95 1nv8_A HEMK protein; class I a 99.5 1.6E-13 5.5E-18 132.1 14.3 133 178-320 89-253 (284)
96 1sui_A Caffeoyl-COA O-methyltr 99.5 6.8E-14 2.3E-18 132.0 11.4 111 200-315 69-189 (247)
97 3ege_A Putative methyltransfer 99.5 3.1E-14 1.1E-18 135.6 9.1 108 194-318 19-132 (261)
98 3g89_A Ribosomal RNA small sub 99.5 3.9E-14 1.3E-18 133.8 9.6 103 210-318 79-186 (249)
99 1zx0_A Guanidinoacetate N-meth 99.5 3.2E-14 1.1E-18 133.4 9.0 99 209-315 58-169 (236)
100 2ex4_A Adrenal gland protein A 99.5 2.8E-14 9.4E-19 134.2 8.6 100 211-317 79-186 (241)
101 3ckk_A TRNA (guanine-N(7)-)-me 99.5 5.8E-14 2E-18 131.4 10.6 109 209-318 44-170 (235)
102 2b3t_A Protein methyltransfera 99.5 8.6E-14 2.9E-18 133.7 12.0 133 179-319 77-241 (276)
103 3m33_A Uncharacterized protein 99.5 3.8E-14 1.3E-18 131.9 9.2 92 209-313 46-139 (226)
104 3orh_A Guanidinoacetate N-meth 99.5 1.5E-14 5E-19 135.7 6.4 99 209-315 58-169 (236)
105 2bm8_A Cephalosporin hydroxyla 99.5 4E-14 1.4E-18 132.6 9.4 115 189-315 60-186 (236)
106 3d2l_A SAM-dependent methyltra 99.5 1.1E-13 3.8E-18 129.9 12.2 108 201-319 23-140 (243)
107 3uwp_A Histone-lysine N-methyl 99.5 9.3E-14 3.2E-18 137.2 11.9 115 195-315 159-287 (438)
108 2fk8_A Methoxy mycolic acid sy 99.5 1.2E-13 4.1E-18 135.4 12.7 100 209-317 88-195 (318)
109 2gs9_A Hypothetical protein TT 99.5 6E-14 2E-18 129.0 9.9 103 202-319 27-135 (211)
110 3h2b_A SAM-dependent methyltra 99.5 3.6E-14 1.2E-18 129.6 8.3 95 212-319 42-144 (203)
111 2gpy_A O-methyltransferase; st 99.5 9.6E-14 3.3E-18 129.8 11.3 117 192-315 37-159 (233)
112 2ift_A Putative methylase HI07 99.5 4E-14 1.4E-18 129.3 8.5 118 196-319 39-166 (201)
113 2hnk_A SAM-dependent O-methylt 99.5 6.7E-14 2.3E-18 131.5 10.1 119 192-316 43-181 (239)
114 1xdz_A Methyltransferase GIDB; 99.5 4.9E-14 1.7E-18 132.5 9.2 104 210-319 69-177 (240)
115 3lcc_A Putative methyl chlorid 99.5 5.5E-14 1.9E-18 131.6 9.5 100 211-318 66-173 (235)
116 3tr6_A O-methyltransferase; ce 99.5 6.7E-14 2.3E-18 130.1 9.7 111 200-315 54-173 (225)
117 3m70_A Tellurite resistance pr 99.5 1.3E-13 4.5E-18 133.0 12.1 106 200-317 111-224 (286)
118 1ri5_A MRNA capping enzyme; me 99.5 2.4E-13 8.1E-18 131.8 13.9 106 208-319 61-177 (298)
119 3bkw_A MLL3908 protein, S-aden 99.5 6.8E-14 2.3E-18 131.4 9.6 99 209-317 41-145 (243)
120 1y8c_A S-adenosylmethionine-de 99.5 1.2E-13 4.1E-18 129.8 11.0 112 198-319 24-145 (246)
121 2ipx_A RRNA 2'-O-methyltransfe 99.5 1.9E-13 6.6E-18 127.8 12.2 103 209-318 75-184 (233)
122 2fpo_A Methylase YHHF; structu 99.5 1E-13 3.6E-18 126.6 10.0 116 196-319 40-163 (202)
123 1dus_A MJ0882; hypothetical pr 99.5 2.8E-13 9.6E-18 122.2 12.6 112 197-319 40-160 (194)
124 3tma_A Methyltransferase; thum 99.5 4.9E-13 1.7E-17 133.1 15.5 120 193-319 187-320 (354)
125 1yb2_A Hypothetical protein TA 99.5 1.9E-13 6.6E-18 131.1 12.1 105 209-319 108-214 (275)
126 1l3i_A Precorrin-6Y methyltran 99.5 2.4E-13 8.4E-18 122.4 12.1 117 193-318 17-136 (192)
127 3dmg_A Probable ribosomal RNA 99.5 2.2E-13 7.4E-18 136.3 12.8 111 199-318 217-342 (381)
128 2frn_A Hypothetical protein PH 99.5 1.8E-13 6E-18 131.5 11.7 102 208-316 122-225 (278)
129 2esr_A Methyltransferase; stru 99.5 6.9E-14 2.4E-18 124.8 8.2 116 198-320 19-142 (177)
130 1o54_A SAM-dependent O-methylt 99.5 4.4E-13 1.5E-17 128.7 14.4 120 193-319 96-216 (277)
131 3ggd_A SAM-dependent methyltra 99.5 1.1E-13 3.7E-18 130.4 9.9 104 202-316 47-163 (245)
132 1ws6_A Methyltransferase; stru 99.5 1.3E-13 4.4E-18 122.0 9.8 118 194-320 24-151 (171)
133 1u2z_A Histone-lysine N-methyl 99.5 4.5E-13 1.5E-17 135.1 14.8 115 195-315 228-358 (433)
134 2fhp_A Methylase, putative; al 99.5 1.3E-13 4.4E-18 124.0 9.8 119 194-319 28-157 (187)
135 1jsx_A Glucose-inhibited divis 99.5 2.5E-13 8.7E-18 124.3 11.9 116 197-319 50-168 (207)
136 3thr_A Glycine N-methyltransfe 99.5 4.5E-14 1.5E-18 136.7 7.2 117 197-319 45-178 (293)
137 3dli_A Methyltransferase; PSI- 99.5 9.7E-14 3.3E-18 130.4 8.9 96 208-319 38-143 (240)
138 2kw5_A SLR1183 protein; struct 99.5 2.8E-13 9.7E-18 123.5 11.8 100 209-318 28-133 (202)
139 3bgv_A MRNA CAP guanine-N7 met 99.5 3.9E-13 1.3E-17 131.5 13.5 120 199-320 22-159 (313)
140 3c3p_A Methyltransferase; NP_9 99.5 1.6E-13 5.3E-18 126.2 9.7 101 210-315 55-159 (210)
141 2yxd_A Probable cobalt-precorr 99.5 9E-13 3.1E-17 117.8 14.4 114 192-319 18-134 (183)
142 1ixk_A Methyltransferase; open 99.5 3.7E-13 1.2E-17 131.6 12.7 111 200-317 109-247 (315)
143 3c3y_A Pfomt, O-methyltransfer 99.5 2.7E-13 9.2E-18 127.1 11.1 112 199-315 59-180 (237)
144 1p91_A Ribosomal RNA large sub 99.4 3.7E-13 1.2E-17 128.6 12.1 109 199-319 72-181 (269)
145 2yvl_A TRMI protein, hypotheti 99.4 2.1E-12 7E-17 121.7 17.0 119 192-319 74-193 (248)
146 2qe6_A Uncharacterized protein 99.4 5.7E-13 1.9E-17 127.6 13.3 100 211-318 77-198 (274)
147 2vdw_A Vaccinia virus capping 99.4 2E-13 6.7E-18 132.6 10.0 108 211-320 48-173 (302)
148 3g2m_A PCZA361.24; SAM-depende 99.4 2.8E-13 9.5E-18 131.6 11.1 115 197-320 71-194 (299)
149 4dzr_A Protein-(glutamine-N5) 99.4 3.7E-14 1.3E-18 130.4 4.4 101 210-318 29-167 (215)
150 1fbn_A MJ fibrillarin homologu 99.4 5.2E-13 1.8E-17 124.6 12.2 99 209-316 72-178 (230)
151 2aot_A HMT, histamine N-methyl 99.4 9.1E-14 3.1E-18 134.6 7.0 102 210-316 51-172 (292)
152 2vdv_E TRNA (guanine-N(7)-)-me 99.4 6.3E-13 2.2E-17 125.3 12.5 108 209-317 47-174 (246)
153 1g8a_A Fibrillarin-like PRE-rR 99.4 6.1E-13 2.1E-17 123.8 12.1 101 209-316 71-178 (227)
154 4gek_A TRNA (CMO5U34)-methyltr 99.4 6.7E-13 2.3E-17 126.1 12.6 86 53-144 67-153 (261)
155 3bxo_A N,N-dimethyltransferase 99.4 5.8E-13 2E-17 124.6 12.0 105 199-317 28-142 (239)
156 2avn_A Ubiquinone/menaquinone 99.4 3.3E-13 1.1E-17 128.4 10.4 105 200-318 43-154 (260)
157 3cgg_A SAM-dependent methyltra 99.4 5.2E-13 1.8E-17 120.6 11.3 97 209-318 44-149 (195)
158 3mq2_A 16S rRNA methyltransfer 99.4 2.1E-13 7.1E-18 126.1 8.8 113 200-317 18-141 (218)
159 2ozv_A Hypothetical protein AT 99.4 3.1E-13 1.1E-17 128.5 10.3 106 209-319 34-173 (260)
160 2nxc_A L11 mtase, ribosomal pr 99.4 2.8E-13 9.4E-18 128.4 9.8 110 197-316 106-218 (254)
161 3lpm_A Putative methyltransfer 99.4 3.4E-13 1.2E-17 128.2 10.4 106 209-320 46-180 (259)
162 3cbg_A O-methyltransferase; cy 99.4 2.2E-13 7.4E-18 127.4 8.8 103 209-315 70-181 (232)
163 2a14_A Indolethylamine N-methy 99.4 9.6E-14 3.3E-18 132.3 6.5 106 209-316 53-197 (263)
164 3i9f_A Putative type 11 methyl 99.4 1E-13 3.5E-18 122.8 6.2 99 201-317 9-113 (170)
165 3a27_A TYW2, uncharacterized p 99.4 5E-13 1.7E-17 127.9 11.3 104 208-318 116-221 (272)
166 2h00_A Methyltransferase 10 do 99.4 2.5E-13 8.4E-18 128.8 9.1 99 211-314 65-190 (254)
167 2g72_A Phenylethanolamine N-me 99.4 2.5E-13 8.6E-18 131.3 9.2 116 199-316 59-215 (289)
168 3gdh_A Trimethylguanosine synt 99.4 5.3E-14 1.8E-18 132.2 4.0 109 198-315 66-180 (241)
169 3p2e_A 16S rRNA methylase; met 99.4 1.8E-13 6.3E-18 127.1 7.4 102 209-316 22-139 (225)
170 2avd_A Catechol-O-methyltransf 99.4 4.1E-13 1.4E-17 125.1 9.7 103 209-315 67-178 (229)
171 1wzn_A SAM-dependent methyltra 99.4 9.2E-13 3.1E-17 124.5 12.2 99 210-318 40-147 (252)
172 3v97_A Ribosomal RNA large sub 99.4 2.8E-12 9.7E-17 138.0 17.3 118 195-318 176-349 (703)
173 3dp7_A SAM-dependent methyltra 99.4 1.7E-12 5.7E-17 129.7 13.1 100 210-316 178-287 (363)
174 2fyt_A Protein arginine N-meth 99.4 1.6E-12 5.5E-17 128.4 11.9 99 209-314 62-169 (340)
175 3ajd_A Putative methyltransfer 99.4 5.9E-13 2E-17 127.6 8.5 104 209-317 81-212 (274)
176 3q7e_A Protein arginine N-meth 99.4 1.1E-12 3.8E-17 130.1 10.7 99 209-314 64-171 (349)
177 2i62_A Nicotinamide N-methyltr 99.4 5.1E-13 1.7E-17 127.1 7.9 106 210-317 55-199 (265)
178 4hg2_A Methyltransferase type 99.4 3.5E-13 1.2E-17 127.6 6.2 84 46-143 29-112 (257)
179 2r3s_A Uncharacterized protein 99.4 3.4E-12 1.1E-16 126.0 13.2 100 210-316 164-271 (335)
180 3adn_A Spermidine synthase; am 99.4 1.5E-12 5.1E-17 125.6 10.4 107 210-317 82-199 (294)
181 3i53_A O-methyltransferase; CO 99.4 3.1E-12 1.1E-16 126.1 12.9 99 211-317 169-275 (332)
182 3giw_A Protein of unknown func 99.4 1.1E-12 3.9E-17 123.5 9.0 101 213-318 80-202 (277)
183 1nkv_A Hypothetical protein YJ 99.4 3.5E-12 1.2E-16 120.7 12.3 93 43-144 25-117 (256)
184 3q87_B N6 adenine specific DNA 99.4 2.7E-12 9.1E-17 113.8 10.7 104 193-317 6-124 (170)
185 1o9g_A RRNA methyltransferase; 99.4 2.1E-12 7.2E-17 122.0 10.5 100 211-315 51-213 (250)
186 2pjd_A Ribosomal RNA small sub 99.4 1.4E-12 4.6E-17 129.3 9.4 108 199-317 186-304 (343)
187 1pjz_A Thiopurine S-methyltran 99.4 1.1E-12 3.6E-17 120.0 8.0 93 46-143 14-114 (203)
188 1af7_A Chemotaxis receptor met 99.4 2.9E-12 1E-16 122.0 11.2 105 211-315 105-251 (274)
189 3gwz_A MMCR; methyltransferase 99.4 4.7E-12 1.6E-16 126.7 13.3 100 209-316 200-307 (369)
190 1vl5_A Unknown conserved prote 99.3 2.7E-12 9.2E-17 121.9 10.9 92 44-145 27-118 (260)
191 1g6q_1 HnRNP arginine N-methyl 99.3 3.4E-12 1.2E-16 125.5 11.9 99 209-314 36-143 (328)
192 1vlm_A SAM-dependent methyltra 99.3 1.7E-12 5.8E-17 120.1 9.0 98 202-319 39-142 (219)
193 2y1w_A Histone-arginine methyl 99.3 1.8E-12 6.2E-17 128.6 9.7 100 209-316 48-155 (348)
194 3dh0_A SAM dependent methyltra 99.3 4.7E-12 1.6E-16 116.8 11.9 96 43-145 26-121 (219)
195 3e8s_A Putative SAM dependent 99.3 1.6E-12 5.5E-17 120.4 8.7 104 199-318 42-154 (227)
196 1x19_A CRTF-related protein; m 99.3 5.5E-12 1.9E-16 125.8 13.1 100 209-316 188-295 (359)
197 2plw_A Ribosomal RNA methyltra 99.3 2.8E-12 9.5E-17 116.8 10.0 93 209-317 20-155 (201)
198 3r0q_C Probable protein argini 99.3 1.8E-12 6.3E-17 129.8 9.6 99 209-315 61-168 (376)
199 1qzz_A RDMB, aclacinomycin-10- 99.3 4.5E-12 1.5E-16 127.1 12.3 101 209-317 180-288 (374)
200 3e05_A Precorrin-6Y C5,15-meth 99.3 6E-12 2.1E-16 114.9 11.9 91 43-141 29-119 (204)
201 3bus_A REBM, methyltransferase 99.3 5.7E-12 1.9E-16 120.5 12.3 97 41-145 48-144 (273)
202 3jwh_A HEN1; methyltransferase 99.3 6.6E-12 2.2E-16 115.8 12.0 102 40-144 15-116 (217)
203 2frx_A Hypothetical protein YE 99.3 4.9E-12 1.7E-16 130.0 12.2 102 211-317 117-247 (479)
204 2igt_A SAM dependent methyltra 99.3 4.9E-12 1.7E-16 124.3 11.6 116 196-318 139-274 (332)
205 3njr_A Precorrin-6Y methylase; 99.3 9E-12 3.1E-16 113.9 12.5 89 41-138 42-130 (204)
206 3mcz_A O-methyltransferase; ad 99.3 2.6E-12 9E-17 127.7 9.7 101 210-316 177-287 (352)
207 3jwg_A HEN1, methyltransferase 99.3 6.4E-12 2.2E-16 116.0 10.8 105 38-145 13-117 (219)
208 2b25_A Hypothetical protein; s 99.3 2.7E-12 9.2E-17 126.8 8.5 109 19-139 79-196 (336)
209 1xj5_A Spermidine synthase 1; 99.3 4.9E-12 1.7E-16 124.1 10.1 106 209-316 118-235 (334)
210 3m6w_A RRNA methylase; rRNA me 99.3 1.8E-12 6E-17 132.1 7.2 103 209-317 99-230 (464)
211 3mti_A RRNA methylase; SAM-dep 99.3 3.6E-12 1.2E-16 114.4 8.4 86 44-137 10-96 (185)
212 3cc8_A Putative methyltransfer 99.3 2.3E-12 7.9E-17 119.6 7.3 94 210-318 31-132 (230)
213 3gjy_A Spermidine synthase; AP 99.3 5.2E-12 1.8E-16 122.0 9.9 99 213-317 91-201 (317)
214 3vc1_A Geranyl diphosphate 2-C 99.3 7.4E-12 2.5E-16 122.3 11.1 92 44-143 106-198 (312)
215 1tw3_A COMT, carminomycin 4-O- 99.3 8.7E-12 3E-16 124.4 11.7 101 209-317 181-289 (360)
216 1xxl_A YCGJ protein; structura 99.3 7.1E-12 2.4E-16 117.5 10.4 93 43-145 10-102 (239)
217 4azs_A Methyltransferase WBDD; 99.3 3.9E-12 1.3E-16 134.4 9.4 105 203-315 58-172 (569)
218 3fpf_A Mtnas, putative unchara 99.3 5.3E-12 1.8E-16 120.3 9.3 83 47-140 115-198 (298)
219 3bwc_A Spermidine synthase; SA 99.3 6.7E-12 2.3E-16 122.0 10.1 107 210-318 94-212 (304)
220 3k6r_A Putative transferase PH 99.3 1.1E-11 3.7E-16 118.0 11.2 102 207-315 121-224 (278)
221 2ip2_A Probable phenazine-spec 99.3 6.1E-12 2.1E-16 124.1 9.9 99 209-316 166-272 (334)
222 4hc4_A Protein arginine N-meth 99.3 7E-12 2.4E-16 124.3 10.3 97 210-314 82-187 (376)
223 1zq9_A Probable dimethyladenos 99.3 8.1E-12 2.8E-16 120.2 10.5 111 193-314 12-145 (285)
224 3f4k_A Putative methyltransfer 99.3 9.8E-12 3.4E-16 117.7 10.9 94 43-143 34-127 (257)
225 3b3j_A Histone-arginine methyl 99.3 5.1E-12 1.7E-16 130.2 9.2 100 209-316 156-263 (480)
226 1inl_A Spermidine synthase; be 99.3 9.3E-12 3.2E-16 120.5 10.4 107 210-318 89-207 (296)
227 1iy9_A Spermidine synthase; ro 99.3 1E-11 3.5E-16 118.8 10.6 107 210-318 74-191 (275)
228 3bkx_A SAM-dependent methyltra 99.3 1.2E-11 4E-16 118.5 10.8 95 45-145 34-137 (275)
229 2yxl_A PH0851 protein, 450AA l 99.3 1.9E-11 6.4E-16 125.4 13.0 104 209-317 257-390 (450)
230 3lec_A NADB-rossmann superfami 99.3 6.4E-12 2.2E-16 115.7 8.5 81 53-138 18-98 (230)
231 3tm4_A TRNA (guanine N2-)-meth 99.3 2.7E-11 9.4E-16 121.1 13.9 114 194-317 203-330 (373)
232 2o07_A Spermidine synthase; st 99.3 8.1E-12 2.8E-16 121.2 9.7 103 210-316 94-209 (304)
233 3dlc_A Putative S-adenosyl-L-m 99.3 1.4E-11 4.7E-16 113.4 10.8 95 42-145 32-126 (219)
234 2qm3_A Predicted methyltransfe 99.3 5.2E-11 1.8E-15 119.2 15.8 102 210-318 171-280 (373)
235 3kkz_A Uncharacterized protein 99.3 1.1E-11 3.8E-16 118.1 10.2 94 43-143 34-127 (267)
236 1ej0_A FTSJ; methyltransferase 99.3 4E-12 1.4E-16 112.7 6.6 94 209-318 20-138 (180)
237 3hp7_A Hemolysin, putative; st 99.3 3.2E-12 1.1E-16 122.1 6.1 96 211-318 85-187 (291)
238 3m4x_A NOL1/NOP2/SUN family pr 99.3 4.9E-12 1.7E-16 128.6 7.8 104 209-317 103-235 (456)
239 3eey_A Putative rRNA methylase 99.3 1.4E-11 4.6E-16 111.8 9.9 82 53-138 19-101 (197)
240 2gb4_A Thiopurine S-methyltran 99.3 1.6E-11 5.4E-16 115.9 10.7 88 54-144 66-166 (252)
241 3gnl_A Uncharacterized protein 99.3 7.7E-12 2.6E-16 116.1 8.2 80 53-137 18-97 (244)
242 1mjf_A Spermidine synthase; sp 99.3 8.1E-12 2.8E-16 120.0 8.7 105 209-317 73-194 (281)
243 1uwv_A 23S rRNA (uracil-5-)-me 99.3 1.3E-11 4.4E-16 126.0 10.6 103 24-136 256-362 (433)
244 1uir_A Polyamine aminopropyltr 99.3 7.4E-12 2.5E-16 122.2 8.4 107 209-316 75-195 (314)
245 3bzb_A Uncharacterized protein 99.3 3.7E-11 1.3E-15 115.5 13.2 107 210-318 78-207 (281)
246 3gru_A Dimethyladenosine trans 99.3 2.6E-11 8.9E-16 116.5 12.0 107 191-309 32-138 (295)
247 3sso_A Methyltransferase; macr 99.3 6.8E-12 2.3E-16 123.7 7.9 93 209-316 214-324 (419)
248 3htx_A HEN1; HEN1, small RNA m 99.3 2.1E-11 7E-16 129.2 11.8 97 42-145 709-811 (950)
249 2o57_A Putative sarcosine dime 99.3 2.7E-11 9.3E-16 117.3 12.0 86 54-145 80-165 (297)
250 3lcv_B Sisomicin-gentamicin re 99.3 1.2E-11 4.1E-16 114.2 8.8 100 207-314 128-234 (281)
251 3gru_A Dimethyladenosine trans 99.3 2.3E-11 7.9E-16 116.9 11.2 90 39-140 35-124 (295)
252 4e2x_A TCAB9; kijanose, tetron 99.2 9.9E-13 3.4E-17 133.9 1.5 100 209-318 105-210 (416)
253 2pt6_A Spermidine synthase; tr 99.2 1.2E-11 4.2E-16 120.9 9.2 108 209-318 114-232 (321)
254 3p9n_A Possible methyltransfer 99.2 1.4E-11 4.9E-16 111.0 8.9 96 40-142 27-125 (189)
255 2jjq_A Uncharacterized RNA met 99.2 3.1E-11 1.1E-15 122.3 12.4 113 196-320 276-391 (425)
256 2b2c_A Spermidine synthase; be 99.2 1.1E-11 3.9E-16 120.6 8.5 107 209-317 106-223 (314)
257 3kr9_A SAM-dependent methyltra 99.2 1.2E-11 4.2E-16 113.6 8.3 80 53-137 12-91 (225)
258 2yxd_A Probable cobalt-precorr 99.2 2E-11 7E-16 108.8 9.5 87 42-139 23-109 (183)
259 3hem_A Cyclopropane-fatty-acyl 99.2 2.7E-11 9.4E-16 117.6 11.2 90 45-145 63-152 (302)
260 1uwv_A 23S rRNA (uracil-5-)-me 99.2 4.1E-11 1.4E-15 122.3 12.5 104 209-320 284-393 (433)
261 4df3_A Fibrillarin-like rRNA/T 99.2 2.7E-11 9.1E-16 112.0 10.0 81 53-140 74-157 (233)
262 3dou_A Ribosomal RNA large sub 99.2 2E-11 7E-16 110.2 8.8 99 200-317 12-140 (191)
263 3frh_A 16S rRNA methylase; met 99.2 7.7E-11 2.6E-15 107.9 12.6 96 210-317 104-206 (253)
264 2p41_A Type II methyltransfera 99.2 3.7E-12 1.3E-16 123.6 3.9 98 208-318 79-193 (305)
265 2b78_A Hypothetical protein SM 99.2 2.2E-11 7.5E-16 122.3 9.7 105 210-320 211-335 (385)
266 3ofk_A Nodulation protein S; N 99.2 2.8E-11 9.7E-16 111.3 9.7 82 53-145 48-129 (216)
267 1yzh_A TRNA (guanine-N(7)-)-me 99.2 7.8E-11 2.7E-15 108.4 12.6 79 55-139 40-120 (214)
268 3mgg_A Methyltransferase; NYSG 99.2 2.5E-11 8.6E-16 116.2 9.7 88 53-146 34-121 (276)
269 3ujc_A Phosphoethanolamine N-m 99.2 3.2E-11 1.1E-15 114.6 10.2 90 43-143 44-133 (266)
270 3gdh_A Trimethylguanosine synt 99.2 3.5E-11 1.2E-15 112.8 9.8 81 54-142 76-156 (241)
271 3lst_A CALO1 methyltransferase 99.2 1.8E-11 6.2E-16 121.5 8.3 97 209-316 182-286 (348)
272 3u81_A Catechol O-methyltransf 99.2 2.1E-11 7.3E-16 112.8 8.1 87 53-143 55-147 (221)
273 3g5t_A Trans-aconitate 3-methy 99.2 6.4E-11 2.2E-15 114.9 11.8 86 54-143 34-126 (299)
274 2yx1_A Hypothetical protein MJ 99.2 4.7E-11 1.6E-15 117.7 11.0 98 208-316 192-291 (336)
275 4dmg_A Putative uncharacterize 99.2 3.1E-11 1E-15 121.1 9.7 103 205-316 208-326 (393)
276 2xvm_A Tellurite resistance pr 99.2 4.5E-11 1.5E-15 108.3 10.0 90 44-144 22-111 (199)
277 1sqg_A SUN protein, FMU protei 99.2 3.9E-11 1.3E-15 122.3 10.7 114 194-316 231-374 (429)
278 3opn_A Putative hemolysin; str 99.2 1.8E-12 6.2E-17 120.8 0.7 111 199-316 26-137 (232)
279 3c0k_A UPF0064 protein YCCW; P 99.2 3.6E-11 1.2E-15 121.4 10.3 106 210-320 219-343 (396)
280 2fpo_A Methylase YHHF; structu 99.2 2.4E-11 8.2E-16 110.8 8.2 92 40-139 39-131 (202)
281 3l8d_A Methyltransferase; stru 99.2 5.7E-11 2E-15 111.2 11.0 90 46-146 43-132 (242)
282 1ne2_A Hypothetical protein TA 99.2 7E-11 2.4E-15 107.4 11.2 109 195-318 34-148 (200)
283 3hm2_A Precorrin-6Y C5,15-meth 99.2 4.9E-11 1.7E-15 106.1 9.8 90 42-140 13-104 (178)
284 4htf_A S-adenosylmethionine-de 99.2 6.4E-11 2.2E-15 114.0 11.4 84 55-145 67-151 (285)
285 3dr5_A Putative O-methyltransf 99.2 2E-11 6.8E-16 113.0 7.4 82 58-142 58-141 (221)
286 1nv8_A HEMK protein; class I a 99.2 7.4E-11 2.5E-15 113.4 11.6 110 14-139 89-201 (284)
287 2i7c_A Spermidine synthase; tr 99.2 3.1E-11 1.1E-15 116.0 8.9 106 210-317 77-193 (283)
288 2fca_A TRNA (guanine-N(7)-)-me 99.2 7.5E-11 2.6E-15 108.5 11.0 78 55-138 37-116 (213)
289 3ntv_A MW1564 protein; rossman 99.2 2.4E-11 8.2E-16 113.4 7.8 93 43-142 60-154 (232)
290 2nyu_A Putative ribosomal RNA 99.2 6.1E-11 2.1E-15 107.3 10.2 94 209-318 20-147 (196)
291 2yqz_A Hypothetical protein TT 99.2 7E-11 2.4E-15 112.0 10.4 83 53-144 36-118 (263)
292 3dxy_A TRNA (guanine-N(7)-)-me 99.2 6.8E-11 2.3E-15 109.1 9.8 79 55-139 33-114 (218)
293 3g89_A Ribosomal RNA small sub 99.2 2.1E-11 7.2E-16 114.9 6.4 79 55-139 79-160 (249)
294 3grz_A L11 mtase, ribosomal pr 99.2 1.2E-10 4.2E-15 106.2 11.4 90 43-141 47-136 (205)
295 1wxx_A TT1595, hypothetical pr 99.2 2.8E-11 9.7E-16 121.5 7.7 101 211-319 209-328 (382)
296 1zq9_A Probable dimethyladenos 99.2 9.6E-11 3.3E-15 112.7 11.0 89 42-141 16-104 (285)
297 3ege_A Putative methyltransfer 99.2 4.4E-11 1.5E-15 113.7 8.5 88 42-145 22-109 (261)
298 1wy7_A Hypothetical protein PH 99.2 5.2E-10 1.8E-14 102.1 15.4 110 193-316 30-148 (207)
299 1kpg_A CFA synthase;, cyclopro 99.2 9.4E-11 3.2E-15 112.9 10.9 88 45-143 55-142 (287)
300 2as0_A Hypothetical protein PH 99.2 3.5E-11 1.2E-15 121.5 8.2 104 209-318 215-337 (396)
301 3reo_A (ISO)eugenol O-methyltr 99.2 3.6E-11 1.2E-15 120.1 8.2 92 209-316 201-300 (368)
302 3id6_C Fibrillarin-like rRNA/T 99.2 8.9E-11 3E-15 108.8 10.1 91 43-140 62-156 (232)
303 2h1r_A Dimethyladenosine trans 99.2 7.8E-11 2.7E-15 114.1 10.1 110 189-310 21-131 (299)
304 2esr_A Methyltransferase; stru 99.2 4E-11 1.4E-15 106.7 7.5 92 42-140 18-110 (177)
305 2oxt_A Nucleoside-2'-O-methylt 99.2 1E-11 3.4E-16 118.0 3.7 100 208-317 71-186 (265)
306 3dtn_A Putative methyltransfer 99.2 1.2E-10 4.1E-15 108.5 11.0 92 44-145 33-124 (234)
307 3m33_A Uncharacterized protein 99.2 1.1E-10 3.9E-15 108.2 10.7 74 54-140 46-121 (226)
308 4azs_A Methyltransferase WBDD; 99.2 3.2E-11 1.1E-15 127.4 7.8 90 49-146 59-150 (569)
309 3ocj_A Putative exported prote 99.2 4.7E-11 1.6E-15 116.2 8.3 89 52-145 114-202 (305)
310 2ift_A Putative methylase HI07 99.2 5.2E-11 1.8E-15 108.5 8.0 95 40-140 38-135 (201)
311 3hnr_A Probable methyltransfer 99.2 9.7E-11 3.3E-15 108.0 10.0 88 44-146 35-122 (220)
312 3g5l_A Putative S-adenosylmeth 99.2 8.3E-11 2.8E-15 111.0 9.6 81 53-143 41-121 (253)
313 2cmg_A Spermidine synthase; tr 99.2 3E-11 1E-15 114.5 6.6 101 210-317 71-172 (262)
314 2b3t_A Protein methyltransfera 99.2 1.3E-10 4.6E-15 111.3 11.1 105 20-140 82-186 (276)
315 1zx0_A Guanidinoacetate N-meth 99.1 3.3E-11 1.1E-15 112.7 6.7 75 54-136 58-134 (236)
316 2wa2_A Non-structural protein 99.1 7.7E-12 2.6E-16 119.4 2.2 99 209-317 80-194 (276)
317 3ou2_A SAM-dependent methyltra 99.1 1.8E-10 6E-15 105.9 11.3 88 44-145 35-122 (218)
318 3tfw_A Putative O-methyltransf 99.1 5.7E-11 2E-15 112.0 8.1 85 53-141 60-147 (248)
319 1ve3_A Hypothetical protein PH 99.1 1.8E-10 6.3E-15 106.6 11.4 86 45-139 27-112 (227)
320 3p9c_A Caffeic acid O-methyltr 99.1 5.3E-11 1.8E-15 118.7 8.2 92 209-316 199-298 (364)
321 4a6d_A Hydroxyindole O-methylt 99.1 1.4E-10 4.8E-15 115.1 11.1 99 209-316 177-283 (353)
322 3mb5_A SAM-dependent methyltra 99.1 1.3E-10 4.5E-15 109.8 10.4 88 43-137 82-169 (255)
323 3r3h_A O-methyltransferase, SA 99.1 1E-11 3.5E-16 116.7 2.6 85 53-141 57-147 (242)
324 3sm3_A SAM-dependent methyltra 99.1 2E-10 6.9E-15 106.7 11.4 90 53-145 27-116 (235)
325 2h00_A Methyltransferase 10 do 99.1 2E-10 6.8E-15 108.6 11.4 81 56-141 65-151 (254)
326 1fp1_D Isoliquiritigenin 2'-O- 99.1 4.2E-11 1.4E-15 120.0 7.0 92 209-316 207-306 (372)
327 3bt7_A TRNA (uracil-5-)-methyl 99.1 3.7E-11 1.3E-15 120.1 6.6 88 26-124 186-273 (369)
328 2bm8_A Cephalosporin hydroxyla 99.1 6.6E-11 2.3E-15 110.6 7.9 84 44-139 71-161 (236)
329 3m70_A Tellurite resistance pr 99.1 1.7E-10 5.8E-15 111.0 11.0 89 44-144 110-198 (286)
330 3pfg_A N-methyltransferase; N, 99.1 1.5E-10 5E-15 110.0 10.3 87 44-144 38-125 (263)
331 2p35_A Trans-aconitate 2-methy 99.1 1.4E-10 4.7E-15 109.8 10.0 85 45-143 24-108 (259)
332 1fp2_A Isoflavone O-methyltran 99.1 7E-11 2.4E-15 117.4 8.3 92 209-316 186-288 (352)
333 1xdz_A Methyltransferase GIDB; 99.1 4.4E-11 1.5E-15 112.2 6.4 76 55-136 69-147 (240)
334 1xtp_A LMAJ004091AAA; SGPP, st 99.1 1.5E-10 5E-15 109.3 10.1 83 53-144 90-172 (254)
335 1i9g_A Hypothetical protein RV 99.1 1.1E-10 3.8E-15 112.0 9.4 88 43-136 88-177 (280)
336 2h1r_A Dimethyladenosine trans 99.1 8.4E-11 2.9E-15 113.9 8.6 86 43-140 31-116 (299)
337 3iv6_A Putative Zn-dependent a 99.1 1.2E-10 4.2E-15 109.8 9.4 90 43-143 34-123 (261)
338 1sui_A Caffeoyl-COA O-methyltr 99.1 6.5E-11 2.2E-15 111.5 7.5 92 44-140 68-166 (247)
339 2fk8_A Methoxy mycolic acid sy 99.1 1.6E-10 5.5E-15 113.0 10.6 82 53-143 87-168 (318)
340 3gu3_A Methyltransferase; alph 99.1 1.3E-10 4.6E-15 111.7 9.8 86 53-145 19-104 (284)
341 1jsx_A Glucose-inhibited divis 99.1 2E-10 6.8E-15 104.9 10.5 90 41-137 49-139 (207)
342 3h2b_A SAM-dependent methyltra 99.1 9.8E-11 3.4E-15 106.6 8.2 76 56-144 41-116 (203)
343 4dzr_A Protein-(glutamine-N5) 99.1 1.3E-11 4.5E-16 113.1 2.3 91 40-140 15-111 (215)
344 1dus_A MJ0882; hypothetical pr 99.1 2.3E-10 7.9E-15 102.9 10.4 87 43-140 41-129 (194)
345 3uwp_A Histone-lysine N-methyl 99.1 6.7E-11 2.3E-15 116.9 7.3 95 40-140 159-262 (438)
346 2fyt_A Protein arginine N-meth 99.1 2E-10 7E-15 113.3 10.9 79 53-138 61-139 (340)
347 3tma_A Methyltransferase; thum 99.1 1.7E-10 5.9E-15 114.6 10.3 96 38-140 187-282 (354)
348 3tqs_A Ribosomal RNA small sub 99.1 2E-10 6.7E-15 108.3 10.1 103 193-308 13-119 (255)
349 3bkw_A MLL3908 protein, S-aden 99.1 2.1E-10 7.2E-15 107.3 10.3 89 44-144 33-121 (243)
350 3bt7_A TRNA (uracil-5-)-methyl 99.1 1.4E-10 4.9E-15 115.8 9.6 96 212-315 214-325 (369)
351 2frn_A Hypothetical protein PH 99.1 2E-10 6.8E-15 110.2 10.1 78 53-137 122-199 (278)
352 2p7i_A Hypothetical protein; p 99.1 1.7E-10 5.8E-15 108.2 9.5 90 43-146 30-119 (250)
353 4fsd_A Arsenic methyltransfera 99.1 2.2E-10 7.4E-15 115.2 10.8 89 54-145 81-181 (383)
354 3k0b_A Predicted N6-adenine-sp 99.1 8E-10 2.7E-14 110.8 14.9 119 194-319 186-353 (393)
355 3tqs_A Ribosomal RNA small sub 99.1 1.7E-10 5.7E-15 108.8 9.3 85 42-139 17-105 (255)
356 1nt2_A Fibrillarin-like PRE-rR 99.1 2E-10 6.9E-15 105.3 9.5 76 53-137 54-133 (210)
357 2f8l_A Hypothetical protein LM 99.1 2.6E-10 8.9E-15 112.8 11.1 101 210-317 129-257 (344)
358 3fut_A Dimethyladenosine trans 99.1 2.5E-10 8.6E-15 108.4 10.4 87 40-140 33-120 (271)
359 2pwy_A TRNA (adenine-N(1)-)-me 99.1 2.8E-10 9.7E-15 107.6 10.8 86 44-136 86-172 (258)
360 1ri5_A MRNA capping enzyme; me 99.1 3.8E-10 1.3E-14 109.0 11.9 83 53-141 61-144 (298)
361 2p8j_A S-adenosylmethionine-de 99.1 2E-10 6.7E-15 105.0 9.4 91 44-143 12-102 (209)
362 2ozv_A Hypothetical protein AT 99.1 1.7E-10 5.7E-15 109.6 9.0 83 53-140 33-125 (260)
363 2ld4_A Anamorsin; methyltransf 99.1 1.8E-11 6E-16 109.0 2.0 82 209-316 10-101 (176)
364 2b9e_A NOL1/NOP2/SUN domain fa 99.1 4.6E-10 1.6E-14 108.9 12.2 79 209-292 100-181 (309)
365 3duw_A OMT, O-methyltransferas 99.1 7.9E-11 2.7E-15 109.0 6.4 85 53-141 55-144 (223)
366 3lpm_A Putative methyltransfer 99.1 1.2E-10 4.1E-15 110.5 7.8 82 53-140 45-129 (259)
367 1u2z_A Histone-lysine N-methyl 99.1 3E-10 1E-14 114.5 11.1 92 43-140 231-333 (433)
368 3q87_B N6 adenine specific DNA 99.1 1.7E-10 5.7E-15 102.2 8.2 80 44-142 11-90 (170)
369 3q7e_A Protein arginine N-meth 99.1 2.4E-10 8E-15 113.3 10.2 80 53-139 63-142 (349)
370 3orh_A Guanidinoacetate N-meth 99.1 8.6E-11 2.9E-15 109.9 6.7 76 54-137 58-135 (236)
371 3tm4_A TRNA (guanine N2-)-meth 99.1 2.1E-10 7.1E-15 114.7 9.8 96 36-139 200-295 (373)
372 2jjq_A Uncharacterized RNA met 99.1 2.4E-10 8.3E-15 115.8 10.2 95 26-136 265-359 (425)
373 3ccf_A Cyclopropane-fatty-acyl 99.1 2.7E-10 9.2E-15 109.3 10.0 85 44-144 47-131 (279)
374 2ex4_A Adrenal gland protein A 99.1 1.2E-10 4E-15 109.2 7.3 83 56-145 79-161 (241)
375 2ipx_A RRNA 2'-O-methyltransfe 99.1 1.8E-10 6.1E-15 107.4 8.5 78 53-137 74-154 (233)
376 2gpy_A O-methyltransferase; st 99.1 1.8E-10 6E-15 107.4 8.3 92 43-141 43-137 (233)
377 3evz_A Methyltransferase; NYSG 99.1 4.6E-10 1.6E-14 104.2 11.2 81 53-141 52-134 (230)
378 1g6q_1 HnRNP arginine N-methyl 99.1 4.3E-10 1.5E-14 110.5 11.5 80 53-139 35-114 (328)
379 3fut_A Dimethyladenosine trans 99.1 4.7E-10 1.6E-14 106.5 11.3 102 193-308 31-133 (271)
380 4hc4_A Protein arginine N-meth 99.1 2E-10 6.9E-15 113.9 9.0 77 53-137 80-156 (376)
381 2fhp_A Methylase, putative; al 99.1 1E-10 3.5E-15 104.8 6.4 94 40-140 29-126 (187)
382 3mq2_A 16S rRNA methyltransfer 99.1 2.9E-10 9.9E-15 104.8 9.5 84 44-136 17-104 (218)
383 3a27_A TYW2, uncharacterized p 99.1 3.9E-10 1.3E-14 107.8 10.5 78 53-137 116-193 (272)
384 3lcc_A Putative methyl chlorid 99.1 1.8E-10 6.3E-15 107.4 8.1 81 56-144 66-146 (235)
385 1yb2_A Hypothetical protein TA 99.1 3E-10 1E-14 108.8 9.8 84 45-136 101-185 (275)
386 2pxx_A Uncharacterized protein 99.1 2.9E-10 1E-14 104.1 9.3 86 46-140 32-117 (215)
387 3ckk_A TRNA (guanine-N(7)-)-me 99.1 2.9E-10 9.9E-15 106.1 9.3 79 54-138 44-131 (235)
388 4dcm_A Ribosomal RNA large sub 99.1 2.8E-10 9.7E-15 113.6 9.7 92 44-141 212-303 (375)
389 3g07_A 7SK snRNA methylphospha 99.1 2.1E-10 7.2E-15 110.8 8.5 88 53-141 43-188 (292)
390 3tr6_A O-methyltransferase; ce 99.1 1.1E-10 3.8E-15 108.1 6.3 84 53-140 61-150 (225)
391 1fbn_A MJ fibrillarin homologu 99.1 3E-10 1E-14 105.7 9.1 74 53-135 71-148 (230)
392 2zfu_A Nucleomethylin, cerebra 99.1 1.3E-10 4.6E-15 106.7 6.6 91 200-317 57-152 (215)
393 2hnk_A SAM-dependent O-methylt 99.1 1.2E-10 4.1E-15 109.1 6.3 93 43-141 49-158 (239)
394 1l3i_A Precorrin-6Y methyltran 99.1 2.5E-10 8.6E-15 102.4 8.1 89 43-141 22-111 (192)
395 3thr_A Glycine N-methyltransfe 99.1 1.5E-10 5.2E-15 111.8 7.0 99 41-145 44-146 (293)
396 3ldg_A Putative uncharacterize 99.1 2.9E-09 9.8E-14 106.3 16.4 117 196-319 181-346 (384)
397 3i9f_A Putative type 11 methyl 99.1 1.4E-10 4.7E-15 102.5 6.0 83 45-145 8-90 (170)
398 1wy7_A Hypothetical protein PH 99.1 7.4E-10 2.5E-14 101.1 11.1 87 43-140 35-122 (207)
399 1y8c_A S-adenosylmethionine-de 99.1 3.8E-10 1.3E-14 105.7 9.2 91 43-143 24-115 (246)
400 3fzg_A 16S rRNA methylase; met 99.1 1.5E-10 5.3E-15 102.1 6.1 82 54-143 47-128 (200)
401 3c3y_A Pfomt, O-methyltransfer 99.0 2.3E-10 7.7E-15 107.1 7.5 92 44-140 59-157 (237)
402 1o54_A SAM-dependent O-methylt 99.0 5.6E-10 1.9E-14 106.9 10.4 86 44-136 102-187 (277)
403 3dmg_A Probable ribosomal RNA 99.0 5.6E-10 1.9E-14 111.6 10.5 78 55-141 232-309 (381)
404 3p2e_A 16S rRNA methylase; met 99.0 2.4E-10 8.1E-15 106.0 7.3 86 44-138 15-105 (225)
405 3ldu_A Putative methylase; str 99.0 1.9E-09 6.6E-14 107.9 14.4 106 209-319 193-347 (385)
406 3r0q_C Probable protein argini 99.0 4.5E-10 1.5E-14 112.4 9.9 79 53-139 60-138 (376)
407 2y1w_A Histone-arginine methyl 99.0 8.5E-10 2.9E-14 109.3 11.6 88 44-141 40-127 (348)
408 3bxo_A N,N-dimethyltransferase 99.0 1.2E-09 4.1E-14 101.9 12.0 85 45-143 29-114 (239)
409 1p91_A Ribosomal RNA large sub 99.0 5.2E-10 1.8E-14 106.6 9.6 87 44-141 72-159 (269)
410 3c3p_A Methyltransferase; NP_9 99.0 2.1E-10 7.3E-15 105.1 6.1 89 45-139 46-135 (210)
411 1qam_A ERMC' methyltransferase 99.0 7.6E-10 2.6E-14 103.9 9.9 87 41-140 17-104 (244)
412 3k6r_A Putative transferase PH 99.0 8.9E-10 3E-14 104.7 10.4 79 53-138 122-200 (278)
413 1ne2_A Hypothetical protein TA 99.0 9E-10 3.1E-14 100.0 10.1 85 43-142 37-122 (200)
414 2vdv_E TRNA (guanine-N(7)-)-me 99.0 1.1E-09 3.9E-14 102.9 11.1 79 53-137 46-135 (246)
415 1wzn_A SAM-dependent methyltra 99.0 1E-09 3.4E-14 103.4 10.6 74 54-137 39-112 (252)
416 2dul_A N(2),N(2)-dimethylguano 99.0 4.1E-10 1.4E-14 112.3 8.3 105 211-316 47-164 (378)
417 2gs9_A Hypothetical protein TT 99.0 1E-09 3.5E-14 100.4 10.4 75 54-144 34-109 (211)
418 1ixk_A Methyltransferase; open 99.0 5.6E-10 1.9E-14 108.9 9.1 85 47-138 111-195 (315)
419 3e23_A Uncharacterized protein 99.0 6E-10 2.1E-14 102.0 8.7 77 53-144 40-116 (211)
420 3uzu_A Ribosomal RNA small sub 99.0 1.5E-09 5E-14 103.7 11.7 105 193-308 26-137 (279)
421 3cvo_A Methyltransferase-like 99.0 1.3E-09 4.5E-14 98.1 10.5 100 209-314 28-152 (202)
422 1zg3_A Isoflavanone 4'-O-methy 99.0 3.1E-10 1.1E-14 113.0 7.1 92 209-316 191-293 (358)
423 1qam_A ERMC' methyltransferase 99.0 2E-09 6.8E-14 101.1 12.2 91 193-296 14-105 (244)
424 2okc_A Type I restriction enzy 99.0 9.3E-10 3.2E-14 112.7 10.7 123 189-317 151-308 (445)
425 2kw5_A SLR1183 protein; struct 99.0 7E-10 2.4E-14 100.8 8.8 74 54-137 28-101 (202)
426 1ws6_A Methyltransferase; stru 99.0 2.7E-10 9.2E-15 100.4 5.8 91 41-140 26-120 (171)
427 2nxc_A L11 mtase, ribosomal pr 99.0 3.5E-10 1.2E-14 106.9 6.9 87 44-140 108-194 (254)
428 3cgg_A SAM-dependent methyltra 99.0 1.7E-09 5.9E-14 97.1 11.0 71 54-137 44-114 (195)
429 1g8a_A Fibrillarin-like PRE-rR 99.0 8.1E-10 2.8E-14 102.5 8.8 78 54-138 71-151 (227)
430 2ih2_A Modification methylase 99.0 4.9E-10 1.7E-14 114.0 8.0 113 189-318 19-166 (421)
431 3bgv_A MRNA CAP guanine-N7 met 99.0 1.2E-09 4.3E-14 106.4 10.3 92 45-143 23-127 (313)
432 3axs_A Probable N(2),N(2)-dime 99.0 4.9E-10 1.7E-14 111.7 7.5 103 210-316 51-158 (392)
433 3d2l_A SAM-dependent methyltra 99.0 1.3E-09 4.4E-14 101.9 9.9 75 53-138 30-104 (243)
434 2avd_A Catechol-O-methyltransf 99.0 3.9E-10 1.3E-14 104.7 6.2 83 53-139 66-154 (229)
435 1m6y_A S-adenosyl-methyltransf 99.0 5.6E-10 1.9E-14 107.6 7.4 88 42-138 14-106 (301)
436 3ggd_A SAM-dependent methyltra 99.0 7.6E-10 2.6E-14 103.8 8.1 80 53-143 53-137 (245)
437 1m6y_A S-adenosyl-methyltransf 99.0 5.5E-10 1.9E-14 107.7 7.2 92 195-295 12-108 (301)
438 2qfm_A Spermine synthase; sper 99.0 5.7E-10 2E-14 108.9 7.3 106 210-317 187-315 (364)
439 3g2m_A PCZA361.24; SAM-depende 99.0 1.1E-09 3.9E-14 106.0 9.5 86 43-137 72-157 (299)
440 3dli_A Methyltransferase; PSI- 99.0 6.7E-10 2.3E-14 103.9 7.6 76 53-144 38-115 (240)
441 1yub_A Ermam, rRNA methyltrans 99.0 1.1E-11 3.6E-16 116.8 -4.9 111 193-316 13-145 (245)
442 3cbg_A O-methyltransferase; cy 99.0 5.7E-10 1.9E-14 104.0 6.9 84 53-140 69-158 (232)
443 2xyq_A Putative 2'-O-methyl tr 99.0 7.4E-10 2.5E-14 105.9 7.2 88 209-317 61-172 (290)
444 2yvl_A TRMI protein, hypotheti 99.0 2.9E-09 9.8E-14 100.0 11.1 84 44-136 81-164 (248)
445 2vdw_A Vaccinia virus capping 99.0 1.1E-09 3.7E-14 106.1 8.4 102 38-141 26-140 (302)
446 3b3j_A Histone-arginine methyl 99.0 2E-09 6.9E-14 110.8 10.8 80 53-140 155-234 (480)
447 3uzu_A Ribosomal RNA small sub 98.9 1.8E-09 6.1E-14 103.1 9.5 77 40-127 28-105 (279)
448 2avn_A Ubiquinone/menaquinone 98.9 2.3E-09 7.7E-14 101.7 10.0 73 54-140 52-124 (260)
449 3ajd_A Putative methyltransfer 98.9 1.1E-09 3.8E-14 104.7 7.5 85 47-138 76-164 (274)
450 2r3s_A Uncharacterized protein 98.9 3.5E-09 1.2E-13 104.2 11.0 91 45-144 154-246 (335)
451 2qe6_A Uncharacterized protein 98.9 4.4E-09 1.5E-13 100.4 11.2 82 56-145 77-172 (274)
452 2igt_A SAM dependent methyltra 98.9 1.1E-09 3.6E-14 107.6 6.9 77 54-137 151-232 (332)
453 2b9e_A NOL1/NOP2/SUN domain fa 98.9 3.9E-09 1.3E-13 102.3 10.5 85 47-138 95-182 (309)
454 3dp7_A SAM-dependent methyltra 98.9 6.2E-09 2.1E-13 103.7 12.0 84 55-145 178-263 (363)
455 1o9g_A RRNA methyltransferase; 98.9 1E-09 3.5E-14 103.4 5.9 80 56-140 51-178 (250)
456 1qyr_A KSGA, high level kasuga 98.9 1.3E-09 4.6E-14 102.4 6.4 89 40-140 7-100 (252)
457 1qzz_A RDMB, aclacinomycin-10- 98.9 4.7E-09 1.6E-13 105.0 10.5 85 53-145 179-263 (374)
458 3gwz_A MMCR; methyltransferase 98.9 7.6E-09 2.6E-13 103.3 11.9 85 53-145 199-283 (369)
459 1x19_A CRTF-related protein; m 98.9 6.7E-09 2.3E-13 103.3 11.4 91 45-145 181-271 (359)
460 1qyr_A KSGA, high level kasuga 98.9 2.6E-09 8.7E-14 100.5 7.8 91 193-295 5-100 (252)
461 3k0b_A Predicted N6-adenine-sp 98.9 5.4E-09 1.8E-13 104.8 10.3 96 37-139 184-316 (393)
462 2a14_A Indolethylamine N-methy 98.9 8.7E-10 3E-14 104.8 4.4 98 43-142 42-168 (263)
463 2qm3_A Predicted methyltransfe 98.9 8E-09 2.7E-13 103.2 11.6 78 54-138 170-249 (373)
464 1yub_A Ermam, rRNA methyltrans 98.9 4.6E-10 1.6E-14 105.5 2.2 84 43-139 18-102 (245)
465 3e8s_A Putative SAM dependent 98.9 3E-09 1E-13 98.1 7.7 82 44-141 42-127 (227)
466 2r6z_A UPF0341 protein in RSP 98.9 5.2E-10 1.8E-14 105.7 2.5 81 53-140 80-171 (258)
467 3bzb_A Uncharacterized protein 98.9 6.2E-09 2.1E-13 99.8 10.1 88 53-142 76-175 (281)
468 3ldu_A Putative methylase; str 98.9 4.7E-09 1.6E-13 105.1 9.5 98 36-140 177-311 (385)
469 2pjd_A Ribosomal RNA small sub 98.9 2.7E-09 9.1E-14 105.5 7.6 88 43-141 185-272 (343)
470 3ldg_A Putative uncharacterize 98.9 7.6E-09 2.6E-13 103.2 10.7 96 37-139 177-309 (384)
471 3ftd_A Dimethyladenosine trans 98.9 3.4E-09 1.2E-13 99.6 7.7 75 41-128 18-92 (249)
472 4gqb_A Protein arginine N-meth 98.8 7.5E-10 2.6E-14 116.1 3.1 78 397-488 359-439 (637)
473 1tw3_A COMT, carminomycin 4-O- 98.8 8.1E-09 2.8E-13 102.7 10.5 90 46-145 175-264 (360)
474 2g72_A Phenylethanolamine N-me 98.8 3.7E-09 1.3E-13 101.8 7.7 98 43-142 58-186 (289)
475 2aot_A HMT, histamine N-methyl 98.8 2.6E-09 8.8E-14 103.1 6.6 87 55-146 51-151 (292)
476 3ftd_A Dimethyladenosine trans 98.8 6.6E-09 2.3E-13 97.6 9.0 102 193-308 15-118 (249)
477 2ar0_A M.ecoki, type I restric 98.8 9.6E-09 3.3E-13 107.3 10.9 123 189-318 149-314 (541)
478 2frx_A Hypothetical protein YE 98.8 5.2E-09 1.8E-13 107.5 8.6 81 53-138 112-195 (479)
479 3i53_A O-methyltransferase; CO 98.8 5.3E-09 1.8E-13 102.9 8.1 84 55-146 168-251 (332)
480 2i62_A Nicotinamide N-methyltr 98.8 3.6E-09 1.2E-13 100.2 6.6 85 55-141 55-168 (265)
481 3mcz_A O-methyltransferase; ad 98.8 1E-08 3.6E-13 101.6 10.0 87 53-145 175-263 (352)
482 2yx1_A Hypothetical protein MJ 98.8 8.7E-09 3E-13 101.4 9.2 74 53-137 192-265 (336)
483 2ip2_A Probable phenazine-spec 98.8 7.5E-09 2.6E-13 101.9 8.5 84 53-145 165-248 (334)
484 2b78_A Hypothetical protein SM 98.8 4.6E-09 1.6E-13 105.3 7.0 77 55-137 211-292 (385)
485 3cc8_A Putative methyltransfer 98.8 6.4E-09 2.2E-13 96.1 7.5 84 44-145 23-108 (230)
486 3frh_A 16S rRNA methylase; met 98.8 7.8E-09 2.7E-13 94.7 7.8 81 55-146 104-184 (253)
487 2yxl_A PH0851 protein, 450AA l 98.8 1.7E-08 5.7E-13 103.5 11.0 84 47-137 252-337 (450)
488 3m6w_A RRNA methylase; rRNA me 98.8 3.8E-09 1.3E-13 107.5 6.0 86 45-138 92-178 (464)
489 3ll7_A Putative methyltransfer 98.8 2.7E-09 9.2E-14 106.6 4.7 74 56-137 93-170 (410)
490 3ll7_A Putative methyltransfer 98.8 1.4E-08 4.9E-13 101.3 9.7 104 209-320 91-213 (410)
491 3m4x_A NOL1/NOP2/SUN family pr 98.8 4.7E-09 1.6E-13 106.7 6.3 88 45-139 96-184 (456)
492 3gjy_A Spermidine synthase; AP 98.8 1.8E-08 6.2E-13 97.2 10.0 74 58-137 91-166 (317)
493 3giw_A Protein of unknown func 98.8 1.2E-08 4.2E-13 96.0 7.9 99 40-145 63-175 (277)
494 1ej0_A FTSJ; methyltransferase 98.8 9.8E-09 3.3E-13 90.5 6.9 72 54-141 20-99 (180)
495 3adn_A Spermidine synthase; am 98.7 1.4E-08 4.8E-13 97.7 8.2 82 55-137 82-164 (294)
496 2r6z_A UPF0341 protein in RSP 98.7 2.7E-09 9.1E-14 100.8 2.6 82 209-297 81-173 (258)
497 3c0k_A UPF0064 protein YCCW; P 98.7 9.4E-09 3.2E-13 103.6 6.6 77 55-137 219-300 (396)
498 3hp7_A Hemolysin, putative; st 98.7 1.4E-08 4.7E-13 96.9 7.2 88 45-146 75-167 (291)
499 2plw_A Ribosomal RNA methyltra 98.7 3.2E-08 1.1E-12 89.6 9.3 71 54-140 20-116 (201)
500 3lcv_B Sisomicin-gentamicin re 98.7 6.5E-09 2.2E-13 96.1 4.6 85 54-146 130-214 (281)
No 1
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.87 E-value=8.3e-22 Score=181.84 Aligned_cols=170 Identities=31% Similarity=0.541 Sum_probs=150.7
Q ss_pred ccccchhcccccChhHHHHHHhccccccccccccCCCCCCCCcccCCCCcccChHHHHHHHHHHHhccCCCCceEEEecc
Q psy7834 142 DIPEGVRFGHIASPKVESVMRSIDRRRFIERPIMNNPYWDIPQSLGFGSVMSSPKVHAQALEILKDYLKPGAKVLDIGSG 221 (492)
Q Consensus 142 ~l~~~L~~~~l~~~~~~~a~~~v~r~~f~~~~~~~~~y~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG 221 (492)
.+.+.|+..++.++.+..++..++++.|.+.......|.+.+.+++.+..++.|.+.+.+++.+. +.++.+|||+|||
T Consensus 10 ~~~~~l~~~gv~~~~~~~~~~~~~r~~f~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~vLdiG~G 87 (210)
T 3lbf_A 10 ALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKAWDNIALPIGQGQTISQPYMVARMTELLE--LTPQSRVLEIGTG 87 (210)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHSCGGGGSCGGGGGGTTSSSCEECTTSCEECCHHHHHHHHHHTT--CCTTCEEEEECCT
T ss_pred HHHHHHHHcCCCCHHHHHHHHhCCHHHcCCcchhhhccCCCccccCCCCEeCCHHHHHHHHHhcC--CCCCCEEEEEcCC
Confidence 45566778888999999999999999999988888899999999999999999999988888875 6789999999999
Q ss_pred ccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEEEecCcchhhHHH
Q psy7834 222 SGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIYVGGAVHHYPFK 301 (492)
Q Consensus 222 ~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~s~~~~~~~~~~ 301 (492)
+|.++..+++. .++|+++|+|+.+++.|++++...+ ..+++++.+|+.+.+...++||+|+++..+++++++
T Consensus 88 ~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~ 159 (210)
T 3lbf_A 88 SGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLD-----LHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTA 159 (210)
T ss_dssp TSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEESCGGGCCGGGCCEEEEEESSBCSSCCTH
T ss_pred CCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcC-----CCceEEEECCcccCCccCCCccEEEEccchhhhhHH
Confidence 99999999988 3589999999999999999998753 357999999998766667899999999999999999
Q ss_pred HHHHhccCCeEEEEeCCCcc
Q psy7834 302 LMDQLKPGGVMWFTIGNAEE 321 (492)
Q Consensus 302 ~~~~L~pgG~l~~~~~~~~~ 321 (492)
+.++|||||++++.+++..+
T Consensus 160 ~~~~L~pgG~lv~~~~~~~~ 179 (210)
T 3lbf_A 160 LMTQLDEGGILVLPVGEEHQ 179 (210)
T ss_dssp HHHTEEEEEEEEEEECSSSC
T ss_pred HHHhcccCcEEEEEEcCCce
Confidence 99999999999999876433
No 2
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.86 E-value=4.6e-21 Score=177.54 Aligned_cols=172 Identities=33% Similarity=0.550 Sum_probs=150.3
Q ss_pred ccccch-hcccccChhHHHHHHhccccccccccccCCCCCCCCcccCCCCcccChHHHHHHHHHHHhccCCCCceEEEec
Q psy7834 142 DIPEGV-RFGHIASPKVESVMRSIDRRRFIERPIMNNPYWDIPQSLGFGSVMSSPKVHAQALEILKDYLKPGAKVLDIGS 220 (492)
Q Consensus 142 ~l~~~L-~~~~l~~~~~~~a~~~v~r~~f~~~~~~~~~y~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGc 220 (492)
.+.+++ +..++.++.+..++..++++.|++.......|.+.+.+++.+..+..|.+...+++.+. +.++.+|||+||
T Consensus 9 ~~~~~l~~~~~~~~~~v~~a~~~~~r~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vLdiG~ 86 (215)
T 2yxe_A 9 AVIEKLIREGYIKSKRVIDALLKVPREEFLPEHLKEYAYVDTPLEIGYGQTISAIHMVGMMCELLD--LKPGMKVLEIGT 86 (215)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHHHSCGGGGSCGGGGGGTTSCSCEEEETTEEECCHHHHHHHHHHTT--CCTTCEEEEECC
T ss_pred HHHHHhHHhcCCCCHHHHHHHHhCCHHHcCCchhhhhcccCCCccCCCCcEeCcHHHHHHHHHhhC--CCCCCEEEEECC
Confidence 345667 78889999999999999999999988877889999988888888899998888888774 678899999999
Q ss_pred cccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEEEecCcchhhHH
Q psy7834 221 GSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIYVGGAVHHYPF 300 (492)
Q Consensus 221 G~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~s~~~~~~~~~ 300 (492)
|+|.++..+++..++..+|+++|+|+.+++.|++++...+ ..+++++.+|+.......++||+|+++..++++++
T Consensus 87 G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~ 161 (215)
T 2yxe_A 87 GCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG-----YDNVIVIVGDGTLGYEPLAPYDRIYTTAAGPKIPE 161 (215)
T ss_dssp TTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT-----CTTEEEEESCGGGCCGGGCCEEEEEESSBBSSCCH
T ss_pred CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-----CCCeEEEECCcccCCCCCCCeeEEEECCchHHHHH
Confidence 9999999999998666799999999999999999988753 35699999998654444678999999999999999
Q ss_pred HHHHHhccCCeEEEEeCCCc
Q psy7834 301 KLMDQLKPGGVMWFTIGNAE 320 (492)
Q Consensus 301 ~~~~~L~pgG~l~~~~~~~~ 320 (492)
++.++|||||++++.+++.+
T Consensus 162 ~~~~~L~pgG~lv~~~~~~~ 181 (215)
T 2yxe_A 162 PLIRQLKDGGKLLMPVGRYL 181 (215)
T ss_dssp HHHHTEEEEEEEEEEESSSS
T ss_pred HHHHHcCCCcEEEEEECCCC
Confidence 99999999999999987653
No 3
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.85 E-value=3.7e-21 Score=179.83 Aligned_cols=173 Identities=39% Similarity=0.730 Sum_probs=144.7
Q ss_pred ccccch-hcccccChhHHHHHHhccccccccccccCCCCCCCCcccCCCCcccChHHHHHHHHHHHhccCCCCceEEEec
Q psy7834 142 DIPEGV-RFGHIASPKVESVMRSIDRRRFIERPIMNNPYWDIPQSLGFGSVMSSPKVHAQALEILKDYLKPGAKVLDIGS 220 (492)
Q Consensus 142 ~l~~~L-~~~~l~~~~~~~a~~~v~r~~f~~~~~~~~~y~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGc 220 (492)
++.+.| ..+.+.++.+.+++..++|+.|.+.. .|.+.+++++.+.++++|.+.+.+++.+...+.++.+|||+||
T Consensus 18 ~l~~~l~~~~~~~~~~~~~a~~~~~r~~f~~~~----~y~d~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~ 93 (227)
T 1r18_A 18 DLIRQLKDHGVIASDAVAQAMKETDRKHYSPRN----PYMDAPQPIGGGVTISAPHMHAFALEYLRDHLKPGARILDVGS 93 (227)
T ss_dssp HHHHHHHHTTSCCCHHHHHHHHTSCGGGTCSSC----TTBSSCEEEETTEEECCHHHHHHHHHHTTTTCCTTCEEEEESC
T ss_pred HHHHHHHhcCCCCCHHHHHHHHhCCHHHcCCcc----cccCCCcccCCCCccCChHHHHHHHHHHHhhCCCCCEEEEECC
Confidence 455566 44557889999999999999998874 8999999999999999999999999988655788999999999
Q ss_pred cccHHHHHHHHHhCC-----CCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEEEecCcc
Q psy7834 221 GSGYLTACMAHMVGP-----TGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIYVGGAV 295 (492)
Q Consensus 221 G~G~~~~~la~~~~~-----~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~s~~~~ 295 (492)
|+|+++..+++..+. .++|+++|+++++++.|++++...+.......+++++.+|....+...++||+|++...+
T Consensus 94 G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~ 173 (227)
T 1r18_A 94 GSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAA 173 (227)
T ss_dssp TTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGGCSEEEEEECSCB
T ss_pred CccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcCCCccEEEECCch
Confidence 999999999997642 368999999999999999998763100000247999999987644444789999999999
Q ss_pred hhhHHHHHHHhccCCeEEEEeCC
Q psy7834 296 HHYPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 296 ~~~~~~~~~~L~pgG~l~~~~~~ 318 (492)
+++++++.++|||||++++.+++
T Consensus 174 ~~~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 174 PDTPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp SSCCHHHHHTEEEEEEEEEEESC
T ss_pred HHHHHHHHHHhcCCCEEEEEEec
Confidence 99999999999999999999875
No 4
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.85 E-value=7.1e-21 Score=177.83 Aligned_cols=173 Identities=31% Similarity=0.532 Sum_probs=147.1
Q ss_pred ccccch-hcccccChhHHHHHHhccccccccccccCCCCCCCCcccCCCCcccChHHHHHHHHHHHhccCCCCceEEEec
Q psy7834 142 DIPEGV-RFGHIASPKVESVMRSIDRRRFIERPIMNNPYWDIPQSLGFGSVMSSPKVHAQALEILKDYLKPGAKVLDIGS 220 (492)
Q Consensus 142 ~l~~~L-~~~~l~~~~~~~a~~~v~r~~f~~~~~~~~~y~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGc 220 (492)
.+.+.| ..+.+.+..+..++..++|+.|++.. .|.+.+++++.+..+++|.+.+.+++.+...+.++.+|||+||
T Consensus 14 ~~~~~l~~~~~~~~~~v~~~~~~~~r~~f~p~~----~y~d~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~ 89 (227)
T 2pbf_A 14 SLLENLKRRGIIDDDDVYNTMLQVDRGKYIKEI----PYIDTPVYISHGVTISAPHMHALSLKRLINVLKPGSRAIDVGS 89 (227)
T ss_dssp HHHHHHHHTTSCCCHHHHHHHHTSCGGGTCSSS----TTSSSCEEEETTEEECCHHHHHHHHHHHTTTSCTTCEEEEESC
T ss_pred HHHHHHHhcCCcCCHHHHHHHHhCCHHHcCCcc----cCCCCccccCCCCccCChHHHHHHHHHHHhhCCCCCEEEEECC
Confidence 455566 44557899999999999999999874 8999999999999999999999999988655788999999999
Q ss_pred cccHHHHHHHHHhC----CCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC----cCCCCccEEEec
Q psy7834 221 GSGYLTACMAHMVG----PTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH----AAEGPYDVIYVG 292 (492)
Q Consensus 221 G~G~~~~~la~~~~----~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~i~s~ 292 (492)
|+|+++..+++..+ +.++|+++|+|+.+++.|++++...+.......+++++.+|+...+ ...++||+|+++
T Consensus 90 G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~~ 169 (227)
T 2pbf_A 90 GSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELGLFDAIHVG 169 (227)
T ss_dssp TTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHCCEEEEEEC
T ss_pred CCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCCCcCEEEEC
Confidence 99999999999876 5679999999999999999998875310000357999999987755 456789999999
Q ss_pred CcchhhHHHHHHHhccCCeEEEEeCC
Q psy7834 293 GAVHHYPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 293 ~~~~~~~~~~~~~L~pgG~l~~~~~~ 318 (492)
..++++++++.++|||||++++.+++
T Consensus 170 ~~~~~~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 170 ASASELPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp SBBSSCCHHHHHHEEEEEEEEEEEEE
T ss_pred CchHHHHHHHHHhcCCCcEEEEEEcc
Confidence 99999999999999999999998865
No 5
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.84 E-value=4.1e-20 Score=173.66 Aligned_cols=170 Identities=32% Similarity=0.490 Sum_probs=148.3
Q ss_pred ccccchh-cccccChhHHHHHHhccccccccccccCCCCCCCCcccCCCCcccChHHHHHHHHHHHhccCCCCceEEEec
Q psy7834 142 DIPEGVR-FGHIASPKVESVMRSIDRRRFIERPIMNNPYWDIPQSLGFGSVMSSPKVHAQALEILKDYLKPGAKVLDIGS 220 (492)
Q Consensus 142 ~l~~~L~-~~~l~~~~~~~a~~~v~r~~f~~~~~~~~~y~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGc 220 (492)
.+.+.|+ .+.+.++.+..++..++|+.|.+.......|.+.+.+++.+..+++|.+...+++.+. +.++.+|||+||
T Consensus 23 ~l~~~l~~~~~~~~~~~~~a~~~v~r~~f~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~vLdiG~ 100 (235)
T 1jg1_A 23 RTVEMLKAEGIIRSKEVERAFLKYPRYLSVEDKYKKYAHIDEPLPIPAGQTVSAPHMVAIMLEIAN--LKPGMNILEVGT 100 (235)
T ss_dssp HHHHHHHHTTSCCSHHHHHHHHHSCGGGGSCGGGGGGTTSSSCEECSTTCEECCHHHHHHHHHHHT--CCTTCCEEEECC
T ss_pred HHHHHHHhcCCCCCHHHHHHHHhCCHhhhCCchhhhcCccCCCcccCCCceeccHHHHHHHHHhcC--CCCCCEEEEEeC
Confidence 5566676 7778889999999999999999988888889999999999999999999998888885 778899999999
Q ss_pred cccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEEEecCcchhhHH
Q psy7834 221 GSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIYVGGAVHHYPF 300 (492)
Q Consensus 221 G~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~s~~~~~~~~~ 300 (492)
|+|.++..+++..+ .+|+++|+|+.+++.|++++...+ ..+++++.+|+.......++||+|+++..++++++
T Consensus 101 G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~Ii~~~~~~~~~~ 173 (235)
T 1jg1_A 101 GSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAG-----VKNVHVILGDGSKGFPPKAPYDVIIVTAGAPKIPE 173 (235)
T ss_dssp TTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEESCGGGCCGGGCCEEEEEECSBBSSCCH
T ss_pred CcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcC-----CCCcEEEECCcccCCCCCCCccEEEECCcHHHHHH
Confidence 99999999999873 689999999999999999988753 35699999997443334456999999999999999
Q ss_pred HHHHHhccCCeEEEEeCCCc
Q psy7834 301 KLMDQLKPGGVMWFTIGNAE 320 (492)
Q Consensus 301 ~~~~~L~pgG~l~~~~~~~~ 320 (492)
++.++|+|||++++++++..
T Consensus 174 ~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 174 PLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp HHHHTEEEEEEEEEEECSSS
T ss_pred HHHHhcCCCcEEEEEEecCC
Confidence 99999999999999987653
No 6
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.82 E-value=1.1e-19 Score=169.58 Aligned_cols=175 Identities=49% Similarity=0.773 Sum_probs=145.4
Q ss_pred ccccchhc-ccccChhHHHHHHhccccccccccccCCCCCCCCcccCCCCcccChHHHHHHHHHHHhccCCCCceEEEec
Q psy7834 142 DIPEGVRF-GHIASPKVESVMRSIDRRRFIERPIMNNPYWDIPQSLGFGSVMSSPKVHAQALEILKDYLKPGAKVLDIGS 220 (492)
Q Consensus 142 ~l~~~L~~-~~l~~~~~~~a~~~v~r~~f~~~~~~~~~y~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGc 220 (492)
++.+.|+. +.+.++.+..++..++++.|.+.. .|.+.+.+.+.+..++.|.+.+.+++.+...+.++.+|||+||
T Consensus 11 ~l~~~l~~~g~~~~~~~~~a~~~~~r~~f~~~~----~y~~~~~~~~~~~~~~~p~~~~~~l~~l~~~~~~~~~vLDiG~ 86 (226)
T 1i1n_A 11 ELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN----PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGS 86 (226)
T ss_dssp HHHHHHHHTTSCCSHHHHHHHHTSCGGGTCSSC----TTSSSCEEEETTEEECCHHHHHHHHHHTTTTSCTTCEEEEETC
T ss_pred HHHHHHHHcCCcCCHHHHHHHHhCCHHHcCCCc----cCCCCccccCCCceecCHHHHHHHHHHHHhhCCCCCEEEEEcC
Confidence 45566644 446788999999999999998763 7888888888888899999988888888655778999999999
Q ss_pred cccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEEEecCcchhhHH
Q psy7834 221 GSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIYVGGAVHHYPF 300 (492)
Q Consensus 221 G~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~s~~~~~~~~~ 300 (492)
|+|..+..+++..++.++|+++|+|+.+++.|++++...+.......+++++++|+...+...++||+|+++..++++++
T Consensus 87 G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~ 166 (226)
T 1i1n_A 87 GSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVVPQ 166 (226)
T ss_dssp TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEECSBBSSCCH
T ss_pred CcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEEECCchHHHHH
Confidence 99999999999876677999999999999999999877431000124799999998765555678999999999999999
Q ss_pred HHHHHhccCCeEEEEeCCCc
Q psy7834 301 KLMDQLKPGGVMWFTIGNAE 320 (492)
Q Consensus 301 ~~~~~L~pgG~l~~~~~~~~ 320 (492)
++.++|||||++++++++..
T Consensus 167 ~~~~~LkpgG~lv~~~~~~~ 186 (226)
T 1i1n_A 167 ALIDQLKPGGRLILPVGPAG 186 (226)
T ss_dssp HHHHTEEEEEEEEEEESCTT
T ss_pred HHHHhcCCCcEEEEEEecCC
Confidence 99999999999999887643
No 7
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.82 E-value=5.8e-20 Score=180.51 Aligned_cols=169 Identities=31% Similarity=0.414 Sum_probs=145.1
Q ss_pred cccchhcccccChhHHHHHHhcccccccccccc-CCCCCCCCc-ccCCC---CcccChHHHHHHHHHHHhccCCCCceEE
Q psy7834 143 IPEGVRFGHIASPKVESVMRSIDRRRFIERPIM-NNPYWDIPQ-SLGFG---SVMSSPKVHAQALEILKDYLKPGAKVLD 217 (492)
Q Consensus 143 l~~~L~~~~l~~~~~~~a~~~v~r~~f~~~~~~-~~~y~d~~~-~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~vLD 217 (492)
+.++++..++.+ .+..++..++++.|+++... ...|.+.+. +++.+ +..++|...+.+++.+. +.++.+|||
T Consensus 5 ~~~~l~~~gi~~-~v~~a~~~vpr~~fl~~~~~y~~~y~~~~~~~l~~~~f~q~~~~~~~~~~l~~~l~--~~~~~~VLD 81 (317)
T 1dl5_A 5 LFWILKKYGVSD-HIAKAFLEIPREEFLTKSYPLSYVYEDIVLVSYDDGEEYSTSSQPSLMALFMEWVG--LDKGMRVLE 81 (317)
T ss_dssp HHHHHHHTTCCH-HHHHHHHHSCGGGGCSSCCCHHHHTSSSCEEEEECSSCEEEECCHHHHHHHHHHTT--CCTTCEEEE
T ss_pred HHHHHHHcCChH-HHHHHHHhCCHHHhCCchhccccCccCCCcccccCCCcceeccCHHHHHHHHHhcC--CCCcCEEEE
Confidence 445667777888 99999999999999988765 557888887 88777 77788888888888775 778999999
Q ss_pred EeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEEEecCcchh
Q psy7834 218 IGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIYVGGAVHH 297 (492)
Q Consensus 218 iGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~s~~~~~~ 297 (492)
+|||+|.++..+++..+..++|+|+|+|+++++.|++++...+ ..+++++.+|+.+.+...++||+|++..++++
T Consensus 82 iGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g-----~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~ 156 (317)
T 1dl5_A 82 IGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-----IENVIFVCGDGYYGVPEFSPYDVIFVTVGVDE 156 (317)
T ss_dssp ECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEESCGGGCCGGGCCEEEEEECSBBSC
T ss_pred ecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCeEEEECChhhccccCCCeEEEEEcCCHHH
Confidence 9999999999999987445789999999999999999998753 35699999999775555678999999999999
Q ss_pred hHHHHHHHhccCCeEEEEeCCC
Q psy7834 298 YPFKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 298 ~~~~~~~~L~pgG~l~~~~~~~ 319 (492)
+++++.++|||||++++++++.
T Consensus 157 ~~~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 157 VPETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp CCHHHHHHEEEEEEEEEEBCBG
T ss_pred HHHHHHHhcCCCcEEEEEECCC
Confidence 9999999999999999988654
No 8
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.79 E-value=3.9e-19 Score=166.37 Aligned_cols=155 Identities=30% Similarity=0.461 Sum_probs=136.9
Q ss_pred ChhHHHHHHhccccccccccccCCCCC--CCCcccCCCCcccChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHH
Q psy7834 154 SPKVESVMRSIDRRRFIERPIMNNPYW--DIPQSLGFGSVMSSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAH 231 (492)
Q Consensus 154 ~~~~~~a~~~v~r~~f~~~~~~~~~y~--d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~ 231 (492)
++.+.+++..++++.|++..+....|. +.+.+++.+..+..|.+.+.+++.+. +.++.+|||+|||+|.++..+++
T Consensus 13 ~~~v~~a~~~v~r~~f~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~ 90 (231)
T 1vbf_A 13 TQELAEAFNKVDRSLFLPENLKDYAYAHTHEALPILPGINTTALNLGIFMLDELD--LHKGQKVLEIGTGIGYYTALIAE 90 (231)
T ss_dssp CHHHHHHHHHSCHHHHSCGGGGGGSSSSTTCCEEEETTEEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHH
T ss_pred CHHHHHHHHhCCHHHcCCcchhhhccccCCCceeeCCCCccCCHHHHHHHHHhcC--CCCCCEEEEEcCCCCHHHHHHHH
Confidence 788999999999999999888888899 88888888888899988888888775 67889999999999999999998
Q ss_pred HhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEEEecCcchhhHHHHHHHhccCCe
Q psy7834 232 MVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIYVGGAVHHYPFKLMDQLKPGGV 311 (492)
Q Consensus 232 ~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~s~~~~~~~~~~~~~~L~pgG~ 311 (492)
.. .+|+|+|+|+.+++.|+++.... .+++++.+|+.+.....++||+|+++..++++++++.++|||||+
T Consensus 91 ~~---~~v~~vD~~~~~~~~a~~~~~~~-------~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~ 160 (231)
T 1vbf_A 91 IV---DKVVSVEINEKMYNYASKLLSYY-------NNIKLILGDGTLGYEEEKPYDRVVVWATAPTLLCKPYEQLKEGGI 160 (231)
T ss_dssp HS---SEEEEEESCHHHHHHHHHHHTTC-------SSEEEEESCGGGCCGGGCCEEEEEESSBBSSCCHHHHHTEEEEEE
T ss_pred Hc---CEEEEEeCCHHHHHHHHHHHhhc-------CCeEEEECCcccccccCCCccEEEECCcHHHHHHHHHHHcCCCcE
Confidence 75 58999999999999999998753 179999999876444567899999999999999999999999999
Q ss_pred EEEEeCCCc
Q psy7834 312 MWFTIGNAE 320 (492)
Q Consensus 312 l~~~~~~~~ 320 (492)
+++.+++..
T Consensus 161 l~~~~~~~~ 169 (231)
T 1vbf_A 161 MILPIGVGR 169 (231)
T ss_dssp EEEEECSSS
T ss_pred EEEEEcCCC
Confidence 999886543
No 9
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.77 E-value=1.4e-17 Score=179.30 Aligned_cols=105 Identities=16% Similarity=0.208 Sum_probs=83.1
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC-cCCCCcc
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH-AAEGPYD 287 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD 287 (492)
..+|.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.|++|+..++. ...+++++++|+.+.. ...++||
T Consensus 537 ~~~g~~VLDlg~GtG~~sl~aa~~g--a~~V~aVD~s~~al~~a~~N~~~ngl---~~~~v~~i~~D~~~~l~~~~~~fD 611 (703)
T 3v97_A 537 MSKGKDFLNLFSYTGSATVHAGLGG--ARSTTTVDMSRTYLEWAERNLRLNGL---TGRAHRLIQADCLAWLREANEQFD 611 (703)
T ss_dssp HCTTCEEEEESCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTC---CSTTEEEEESCHHHHHHHCCCCEE
T ss_pred hcCCCcEEEeeechhHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCC---CccceEEEecCHHHHHHhcCCCcc
Confidence 3468899999999999999998753 35799999999999999999988752 1247999999986532 2357899
Q ss_pred EEEecCcc-----------h------hhHHHHHHHhccCCeEEEEeCC
Q psy7834 288 VIYVGGAV-----------H------HYPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 288 ~i~s~~~~-----------~------~~~~~~~~~L~pgG~l~~~~~~ 318 (492)
+|+++... . .+...+.++|+|||+|++++..
T Consensus 612 ~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 612 LIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp EEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 99987632 1 1234778999999999998765
No 10
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.74 E-value=1.1e-17 Score=159.13 Aligned_cols=114 Identities=17% Similarity=0.341 Sum_probs=94.1
Q ss_pred HHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEcc
Q psy7834 197 VHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVG-PTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGD 275 (492)
Q Consensus 197 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d 275 (492)
+...+..++...+++|.+|||+|||+|.++..++++.. ++.+|+|+|+|+.|++.|++++...+ ...+++++++|
T Consensus 56 ~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~----~~~~v~~~~~D 131 (261)
T 4gek_A 56 IISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK----APTPVDVIEGD 131 (261)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC----CSSCEEEEESC
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc----cCceEEEeecc
Confidence 33444445555688999999999999999999999864 45699999999999999999988754 23589999999
Q ss_pred CCCCCcCCCCccEEEecCcchhhHH--------HHHHHhccCCeEEEEe
Q psy7834 276 GREGHAAEGPYDVIYVGGAVHHYPF--------KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 276 ~~~~~~~~~~fD~i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~ 316 (492)
+.+.+. ++||+|+++.++|++++ +++++|||||+|++..
T Consensus 132 ~~~~~~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 132 IRDIAI--ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp TTTCCC--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccc--cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 987644 46999999999998752 7899999999999864
No 11
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.66 E-value=2e-16 Score=145.58 Aligned_cols=127 Identities=32% Similarity=0.503 Sum_probs=111.4
Q ss_pred CcccCCCCCCC----CCccccccccccCCcccCCccccccchhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHH
Q psy7834 1 MLAVDRGHYTT----WRPYANCITNIGYGAHMQAPFQDNTKFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAW 76 (492)
Q Consensus 1 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~ 76 (492)
|+.|||..|+| ..+|.+..+++..+..++.|.. .+.+++.+ .+.++.+|||+|||+|.++..+++
T Consensus 29 ~~~~~r~~f~~~~~~~~~y~~~~~~~~~~~~~~~~~~---------~~~~~~~l--~~~~~~~vLdiG~G~G~~~~~la~ 97 (210)
T 3lbf_A 29 LAAVPREKFVDEAFEQKAWDNIALPIGQGQTISQPYM---------VARMTELL--ELTPQSRVLEIGTGSGYQTAILAH 97 (210)
T ss_dssp HHHSCGGGGSCGGGGGGTTSSSCEECTTSCEECCHHH---------HHHHHHHT--TCCTTCEEEEECCTTSHHHHHHHH
T ss_pred HHhCCHHHcCCcchhhhccCCCccccCCCCEeCCHHH---------HHHHHHhc--CCCCCCEEEEEcCCCCHHHHHHHH
Confidence 35789999999 5678888888888888888877 78888888 788899999999999999999999
Q ss_pred HhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccceeccCcccccccc
Q psy7834 77 CVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDIIHVGGSIEDIPEG 146 (492)
Q Consensus 77 ~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~l~~~ 146 (492)
.. .+|+++|+++++++.|++++...++ .+++++++|+.+.+...++||+|+++..++++++.
T Consensus 98 ~~---~~v~~vD~~~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~ 159 (210)
T 3lbf_A 98 LV---QHVCSVERIKGLQWQARRRLKNLDL-----HNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTA 159 (210)
T ss_dssp HS---SEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEESCGGGCCGGGCCEEEEEESSBCSSCCTH
T ss_pred hC---CEEEEEecCHHHHHHHHHHHHHcCC-----CceEEEECCcccCCccCCCccEEEEccchhhhhHH
Confidence 84 8999999999999999999988887 68999999998877667899999999888876654
No 12
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.65 E-value=1.6e-16 Score=148.12 Aligned_cols=137 Identities=34% Similarity=0.539 Sum_probs=113.0
Q ss_pred CcccCCCCCCCCCccccccccccCCcccCCccccccchhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhC-
Q psy7834 1 MLAVDRGHYTTWRPYANCITNIGYGAHMQAPFQDNTKFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVG- 79 (492)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~- 79 (492)
|+.|||..|+|..+|.+.+++++.++.++.|.. .+.+++.+...+.++.+|||+|||+|+++..+++..+
T Consensus 34 ~~~~~r~~f~p~~~y~d~~~~~~~~~~~~~p~~---------~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~ 104 (227)
T 2pbf_A 34 MLQVDRGKYIKEIPYIDTPVYISHGVTISAPHM---------HALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNV 104 (227)
T ss_dssp HHTSCGGGTCSSSTTSSSCEEEETTEEECCHHH---------HHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTT
T ss_pred HHhCCHHHcCCcccCCCCccccCCCCccCChHH---------HHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcc
Confidence 467999999998899999999988888998877 6777887743477889999999999999999999875
Q ss_pred ---CCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC----CCCCcccceeccCcccccccc
Q psy7834 80 ---KTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY----LDEAPYDIIHVGGSIEDIPEG 146 (492)
Q Consensus 80 ---~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~~D~i~~~~~~~~l~~~ 146 (492)
+.++|+++|+++++++.|+++..+.++..+...+++++++|+.+.. ...++||+|++....+++.+.
T Consensus 105 ~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~~~~ 178 (227)
T 2pbf_A 105 LENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELGLFDAIHVGASASELPEI 178 (227)
T ss_dssp TTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHCCEEEEEECSBBSSCCHH
T ss_pred cCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCCCcCEEEECCchHHHHHH
Confidence 5569999999999999999998776520000168999999998865 556789999999888765443
No 13
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.65 E-value=1.1e-16 Score=151.81 Aligned_cols=102 Identities=24% Similarity=0.311 Sum_probs=86.2
Q ss_pred HHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC
Q psy7834 201 ALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH 280 (492)
Q Consensus 201 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 280 (492)
+.+.|....+.+.+|||||||+|.++..|++.+ .+|+|+|+|+.|++.|++ .++++++++|+.+.+
T Consensus 29 l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~-----------~~~v~~~~~~~e~~~ 94 (257)
T 4hg2_A 29 LFRWLGEVAPARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALR-----------HPRVTYAVAPAEDTG 94 (257)
T ss_dssp HHHHHHHHSSCSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCC-----------CTTEEEEECCTTCCC
T ss_pred HHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhh-----------cCCceeehhhhhhhc
Confidence 344554445667899999999999999999874 379999999999987753 247999999999888
Q ss_pred cCCCCccEEEecCcchhhHH-----HHHHHhccCCeEEEEe
Q psy7834 281 AAEGPYDVIYVGGAVHHYPF-----KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 281 ~~~~~fD~i~s~~~~~~~~~-----~~~~~L~pgG~l~~~~ 316 (492)
.++++||+|++..++||++. ++.|+|||||+|++..
T Consensus 95 ~~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 95 LPPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp CCSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEE
Confidence 88899999999999998863 8999999999998865
No 14
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.64 E-value=7.3e-16 Score=146.28 Aligned_cols=114 Identities=28% Similarity=0.329 Sum_probs=95.1
Q ss_pred ChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEE
Q psy7834 194 SPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVD 273 (492)
Q Consensus 194 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~ 273 (492)
.+.....+++.+. +.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|++++...+ ...++++++
T Consensus 21 ~~~~~~~l~~~~~--~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~----~~~~v~~~~ 92 (256)
T 1nkv_A 21 TEEKYATLGRVLR--MKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELG----VSERVHFIH 92 (256)
T ss_dssp CHHHHHHHHHHTC--CCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEE
T ss_pred CHHHHHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcC----CCcceEEEE
Confidence 3455556666554 6788999999999999999999986 3489999999999999999988754 224799999
Q ss_pred ccCCCCCcCCCCccEEEecCcchhhH------HHHHHHhccCCeEEEEe
Q psy7834 274 GDGREGHAAEGPYDVIYVGGAVHHYP------FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 274 ~d~~~~~~~~~~fD~i~s~~~~~~~~------~~~~~~L~pgG~l~~~~ 316 (492)
+|+.+.++ +++||+|++..++++++ .++.++|||||++++..
T Consensus 93 ~d~~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 93 NDAAGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp SCCTTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred CChHhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 99987665 78899999999988874 48889999999999965
No 15
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.64 E-value=4.8e-15 Score=135.69 Aligned_cols=118 Identities=21% Similarity=0.356 Sum_probs=97.7
Q ss_pred cChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE
Q psy7834 193 SSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV 272 (492)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~ 272 (492)
+...+...+++.+. +.++.+|||+|||+|.++..+++.. +.++|+|+|+|+.|++.|++++..++ ..+++++
T Consensus 24 ~~~~i~~~~l~~l~--~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~ 95 (204)
T 3e05_A 24 TKQEVRAVTLSKLR--LQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFV-----ARNVTLV 95 (204)
T ss_dssp CCHHHHHHHHHHTT--CCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHT-----CTTEEEE
T ss_pred ChHHHHHHHHHHcC--CCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhC-----CCcEEEE
Confidence 55566566676664 6788999999999999999999985 67899999999999999999998764 3579999
Q ss_pred EccCCCCCcCCCCccEEEecCcchhh---HHHHHHHhccCCeEEEEeCC
Q psy7834 273 DGDGREGHAAEGPYDVIYVGGAVHHY---PFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 273 ~~d~~~~~~~~~~fD~i~s~~~~~~~---~~~~~~~L~pgG~l~~~~~~ 318 (492)
++|+.+.....++||+|+++..++.. .+++.++|||||++++....
T Consensus 96 ~~d~~~~~~~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 96 EAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp ECCTTTTCTTSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred eCChhhhhhcCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecc
Confidence 99987655555789999999876533 45899999999999997643
No 16
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.64 E-value=3.8e-16 Score=143.09 Aligned_cols=104 Identities=17% Similarity=0.088 Sum_probs=81.9
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCC-----C--CCCCCcEEEEEccCCCCCc
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYP-----N--LMEGGRVQFVDGDGREGHA 281 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~-----~--~~~~~~v~~~~~d~~~~~~ 281 (492)
++++.+|||+|||+|..+..|+++. .+|+|+|+|+.|++.|+++...... . .....+++++++|+.+.+.
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~g---~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~ 96 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQG---YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA 96 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHHC---CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHCC---CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCc
Confidence 5678999999999999999999873 3799999999999999987642000 0 0012478999999988765
Q ss_pred CC-CCccEEEecCcchhhHH--------HHHHHhccCCeEEEE
Q psy7834 282 AE-GPYDVIYVGGAVHHYPF--------KLMDQLKPGGVMWFT 315 (492)
Q Consensus 282 ~~-~~fD~i~s~~~~~~~~~--------~~~~~L~pgG~l~~~ 315 (492)
.+ ++||+|++..++++++. ++.++|||||++++.
T Consensus 97 ~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 97 RDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp HHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred ccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 54 78999999988887752 688999999995543
No 17
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.64 E-value=4.9e-15 Score=135.74 Aligned_cols=119 Identities=22% Similarity=0.309 Sum_probs=97.3
Q ss_pred cccChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCC-cE
Q psy7834 191 VMSSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGG-RV 269 (492)
Q Consensus 191 ~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~-~v 269 (492)
.++.+.+...+++.+. +.++.+|||+|||+|.++..+++. .++|+|+|+|+.|++.|+++++.++ .. ++
T Consensus 37 ~~~~~~~~~~~l~~l~--~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g-----~~~~v 106 (204)
T 3njr_A 37 QITKSPMRALTLAALA--PRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYG-----LSPRM 106 (204)
T ss_dssp CCCCHHHHHHHHHHHC--CCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTT-----CTTTE
T ss_pred CCCcHHHHHHHHHhcC--CCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcC-----CCCCE
Confidence 3455666667777765 678899999999999999999987 4589999999999999999998764 33 79
Q ss_pred EEEEccCCCCCcCCCCccEEEecCcchh-hHHHHHHHhccCCeEEEEeCCC
Q psy7834 270 QFVDGDGREGHAAEGPYDVIYVGGAVHH-YPFKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 270 ~~~~~d~~~~~~~~~~fD~i~s~~~~~~-~~~~~~~~L~pgG~l~~~~~~~ 319 (492)
+++++|+.+.....++||+|+++..+.. +.+++.++|||||++++.....
T Consensus 107 ~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 107 RAVQGTAPAALADLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAVTL 157 (204)
T ss_dssp EEEESCTTGGGTTSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEECSH
T ss_pred EEEeCchhhhcccCCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEecCc
Confidence 9999999774444568999999876533 6679999999999999987543
No 18
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.63 E-value=1.2e-15 Score=141.16 Aligned_cols=102 Identities=24% Similarity=0.334 Sum_probs=86.8
Q ss_pred ccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC---CcCCC
Q psy7834 208 YLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG---HAAEG 284 (492)
Q Consensus 208 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~ 284 (492)
.++||.+|||+|||+|+++..+|+.+++.|+|+|+|+|++|++.+++++.+. +|+..+.+|.... ....+
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~-------~ni~~V~~d~~~p~~~~~~~~ 146 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR-------RNIFPILGDARFPEKYRHLVE 146 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC-------TTEEEEESCTTCGGGGTTTCC
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh-------cCeeEEEEeccCccccccccc
Confidence 3789999999999999999999999999999999999999999999887653 5899999987643 23457
Q ss_pred CccEEEecCcchhhH----HHHHHHhccCCeEEEEe
Q psy7834 285 PYDVIYVGGAVHHYP----FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 285 ~fD~i~s~~~~~~~~----~~~~~~L~pgG~l~~~~ 316 (492)
++|+|++....++-+ .++.+.|||||++++.+
T Consensus 147 ~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 147 GVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp CEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 899999887766543 47889999999999875
No 19
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.63 E-value=9.9e-16 Score=145.84 Aligned_cols=108 Identities=27% Similarity=0.426 Sum_probs=91.9
Q ss_pred HHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCC
Q psy7834 199 AQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGRE 278 (492)
Q Consensus 199 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 278 (492)
..+++.+. +.++.+|||+|||+|.++..+++.. + +|+|+|+|+.|++.|++++...+ .++++++++|+..
T Consensus 27 ~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~gvD~s~~~l~~a~~~~~~~~-----~~~v~~~~~d~~~ 96 (260)
T 1vl5_A 27 AKLMQIAA--LKGNEEVLDVATGGGHVANAFAPFV-K--KVVAFDLTEDILKVARAFIEGNG-----HQQVEYVQGDAEQ 96 (260)
T ss_dssp HHHHHHHT--CCSCCEEEEETCTTCHHHHHHGGGS-S--EEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEECCC-C
T ss_pred HHHHHHhC--CCCCCEEEEEeCCCCHHHHHHHHhC-C--EEEEEeCCHHHHHHHHHHHHhcC-----CCceEEEEecHHh
Confidence 45566664 5678999999999999999999875 3 89999999999999999987753 3579999999988
Q ss_pred CCcCCCCccEEEecCcchhhHH------HHHHHhccCCeEEEEe
Q psy7834 279 GHAAEGPYDVIYVGGAVHHYPF------KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 279 ~~~~~~~fD~i~s~~~~~~~~~------~~~~~L~pgG~l~~~~ 316 (492)
.+.++++||+|+++.+++|+++ ++.++|||||++++..
T Consensus 97 l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 97 MPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp CCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 7777789999999999988863 8899999999999964
No 20
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.63 E-value=1.5e-15 Score=136.77 Aligned_cols=112 Identities=20% Similarity=0.238 Sum_probs=86.6
Q ss_pred HHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCC
Q psy7834 199 AQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGRE 278 (492)
Q Consensus 199 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 278 (492)
..+...+...++++.+|||+|||+|.++..++++ .++|+|+|+|+.|++.|++++...+ ..+++++++|...
T Consensus 10 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~-----~~~v~~~~~~~~~ 81 (185)
T 3mti_A 10 HMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLG-----IENTELILDGHEN 81 (185)
T ss_dssp HHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHT-----CCCEEEEESCGGG
T ss_pred HHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcC-----CCcEEEEeCcHHH
Confidence 4445555556788999999999999999999987 4589999999999999999998764 3689999977755
Q ss_pred CC-cCCCCccEEEecC-cchh-------hH-------HHHHHHhccCCeEEEEeCC
Q psy7834 279 GH-AAEGPYDVIYVGG-AVHH-------YP-------FKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 279 ~~-~~~~~fD~i~s~~-~~~~-------~~-------~~~~~~L~pgG~l~~~~~~ 318 (492)
.. ..+++||+|+++. .+++ .+ .++.++|||||++++.+..
T Consensus 82 l~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 82 LDHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp GGGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred HHhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 32 2357899999883 3332 22 4788999999999997643
No 21
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.63 E-value=2.4e-16 Score=147.07 Aligned_cols=137 Identities=38% Similarity=0.714 Sum_probs=110.2
Q ss_pred CcccCCCCCCCCCccccccccccCCcccCCccccccchhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCC
Q psy7834 1 MLAVDRGHYTTWRPYANCITNIGYGAHMQAPFQDNTKFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGK 80 (492)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~ 80 (492)
|+.|||..|.|..+|.+.++++++++.++.|.. .+.+++.+...+.++.+|||+|||+|+++..+++..+.
T Consensus 38 ~~~~~r~~f~~~~~y~d~~~~~~~~~~~~~p~~---------~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~ 108 (227)
T 1r18_A 38 MKETDRKHYSPRNPYMDAPQPIGGGVTISAPHM---------HAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKA 108 (227)
T ss_dssp HHTSCGGGTCSSCTTBSSCEEEETTEEECCHHH---------HHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHH
T ss_pred HHhCCHHHcCCcccccCCCcccCCCCccCChHH---------HHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhccc
Confidence 467999999998899999999999999999987 78888887434778899999999999999999997632
Q ss_pred -----CcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccceeccCcccccccc
Q psy7834 81 -----TGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDIIHVGGSIEDIPEG 146 (492)
Q Consensus 81 -----~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~l~~~ 146 (492)
.++|+++|+++++++.|++++.+.+...+...+++++++|+.+.....++||+|++....+++.+.
T Consensus 109 ~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~~~~~ 179 (227)
T 1r18_A 109 KGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTE 179 (227)
T ss_dssp SCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGGCSEEEEEECSCBSSCCHH
T ss_pred ccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcCCCccEEEECCchHHHHHH
Confidence 259999999999999999988764400000158999999998733333789999999888766543
No 22
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.62 E-value=1.6e-15 Score=140.40 Aligned_cols=112 Identities=25% Similarity=0.376 Sum_probs=96.2
Q ss_pred HHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCC
Q psy7834 199 AQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGRE 278 (492)
Q Consensus 199 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 278 (492)
..+++.+. +.++.+|||+|||+|.++..+++..++..+|+|+|+|+.|++.|++++...+ ..+++++++|+..
T Consensus 27 ~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~d~~~ 99 (219)
T 3dh0_A 27 EKVLKEFG--LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG-----LKNVEVLKSEENK 99 (219)
T ss_dssp HHHHHHHT--CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT-----CTTEEEEECBTTB
T ss_pred HHHHHHhC--CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC-----CCcEEEEeccccc
Confidence 45566654 6778999999999999999999998677899999999999999999988764 3479999999987
Q ss_pred CCcCCCCccEEEecCcchhhH------HHHHHHhccCCeEEEEeC
Q psy7834 279 GHAAEGPYDVIYVGGAVHHYP------FKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 279 ~~~~~~~fD~i~s~~~~~~~~------~~~~~~L~pgG~l~~~~~ 317 (492)
.+.++++||+|+++.++++++ .++.++|||||++++...
T Consensus 100 ~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 144 (219)
T 3dh0_A 100 IPLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDW 144 (219)
T ss_dssp CSSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEe
Confidence 766778999999999998875 388999999999999753
No 23
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.62 E-value=3e-15 Score=133.67 Aligned_cols=120 Identities=21% Similarity=0.242 Sum_probs=95.4
Q ss_pred cccChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEE
Q psy7834 191 VMSSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQ 270 (492)
Q Consensus 191 ~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~ 270 (492)
.++.+.+...+++.+. +.++.+|||+|||+|.++..+++.. +..+|+++|+|+.|++.|++++...+ ...++
T Consensus 7 ~~t~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~- 78 (178)
T 3hm2_A 7 QLTKQHVRALAISALA--PKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLG----VSDRI- 78 (178)
T ss_dssp CSHHHHHHHHHHHHHC--CCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTT----CTTSE-
T ss_pred cccHHHHHHHHHHHhc--ccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhC----CCCCE-
Confidence 3344555666676664 6788899999999999999999886 67899999999999999999988754 12378
Q ss_pred EEEccCCCCCcCC-CCccEEEecCcchh--hHHHHHHHhccCCeEEEEeCC
Q psy7834 271 FVDGDGREGHAAE-GPYDVIYVGGAVHH--YPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 271 ~~~~d~~~~~~~~-~~fD~i~s~~~~~~--~~~~~~~~L~pgG~l~~~~~~ 318 (492)
++.+|..+..... ++||+|+++..+++ +.+++.+.|||||++++....
T Consensus 79 ~~~~d~~~~~~~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 79 AVQQGAPRAFDDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp EEECCTTGGGGGCCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEECS
T ss_pred EEecchHhhhhccCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEeec
Confidence 8888875533322 78999999998887 667999999999999997643
No 24
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.61 E-value=5.3e-15 Score=141.04 Aligned_cols=103 Identities=17% Similarity=0.160 Sum_probs=84.8
Q ss_pred ccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCcc
Q psy7834 208 YLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYD 287 (492)
Q Consensus 208 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 287 (492)
.++++.+|||||||+|.++..++.+. +.++|+|+|+|++|++.|++++++.+ ..+++|+++|+.+.+ +++||
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~g-----l~~v~~v~gDa~~l~--d~~FD 190 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLG-----VDGVNVITGDETVID--GLEFD 190 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHT-----CCSEEEEESCGGGGG--GCCCS
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcC-----CCCeEEEECchhhCC--CCCcC
Confidence 37899999999999998775544443 46799999999999999999998864 268999999997743 67899
Q ss_pred EEEecCcch---hhHHHHHHHhccCCeEEEEeCC
Q psy7834 288 VIYVGGAVH---HYPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 288 ~i~s~~~~~---~~~~~~~~~L~pgG~l~~~~~~ 318 (492)
+|++..... .+.+++.++|||||+|++....
T Consensus 191 vV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 191 VLMVAALAEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp EEEECTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred EEEECCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 999876654 4557999999999999997643
No 25
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.61 E-value=3e-15 Score=148.12 Aligned_cols=141 Identities=23% Similarity=0.297 Sum_probs=108.7
Q ss_pred CCCCCCcccCCCCcccChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHH
Q psy7834 178 PYWDIPQSLGFGSVMSSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMH 257 (492)
Q Consensus 178 ~y~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~ 257 (492)
.|.+....+..+..+..|...+.+++.+. +.++.+|||+|||+|.++..+++..++.++|+++|+++.+++.|++++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~--~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~ 151 (336)
T 2b25_A 74 ALEDYVVLMKRGTAITFPKDINMILSMMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYK 151 (336)
T ss_dssp CHHHHHHHSCCSSCCCCHHHHHHHHHHHT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHH
T ss_pred CHHHHhhhhcCCCcccCHHHHHHHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH
Confidence 34445556677778888888888888875 7889999999999999999999987777899999999999999999987
Q ss_pred hhC----CCCC--CCCcEEEEEccCCCCC--cCCCCccEEEecCcchh-hHHHHHHHhccCCeEEEEeCCCc
Q psy7834 258 TYY----PNLM--EGGRVQFVDGDGREGH--AAEGPYDVIYVGGAVHH-YPFKLMDQLKPGGVMWFTIGNAE 320 (492)
Q Consensus 258 ~~~----~~~~--~~~~v~~~~~d~~~~~--~~~~~fD~i~s~~~~~~-~~~~~~~~L~pgG~l~~~~~~~~ 320 (492)
..+ .+-. ...+++++++|+.+.. .++++||+|+++...++ +..++.++|||||+|++..+..+
T Consensus 152 ~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 223 (336)
T 2b25_A 152 HWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVVNIT 223 (336)
T ss_dssp HHHHHHTTTCSSCCCCCEEEEESCTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEESSHH
T ss_pred HhhcccccccccccCCceEEEECChHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeCCHH
Confidence 531 0000 1257999999997653 24568999999866544 36789999999999999876544
No 26
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.61 E-value=1.3e-15 Score=141.81 Aligned_cols=136 Identities=47% Similarity=0.833 Sum_probs=111.3
Q ss_pred cccCCCCCCCCCccccccccccCCcccCCccccccchhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCC
Q psy7834 2 LAVDRGHYTTWRPYANCITNIGYGAHMQAPFQDNTKFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKT 81 (492)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~ 81 (492)
+.|+|..|.|+.+|.+.+.++.+++.++.|.. .+.+++.+...+.++.+|||+|||+|.++..+++..++.
T Consensus 32 ~~~~r~~f~~~~~y~~~~~~~~~~~~~~~p~~---------~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~ 102 (226)
T 1i1n_A 32 LATDRSHYAKCNPYMDSPQSIGFQATISAPHM---------HAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCT 102 (226)
T ss_dssp HTSCGGGTCSSCTTSSSCEEEETTEEECCHHH---------HHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTT
T ss_pred HhCCHHHcCCCccCCCCccccCCCceecCHHH---------HHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCC
Confidence 46899999998899999988888888999877 677888773337788999999999999999999987666
Q ss_pred cEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccceeccCcccccccc
Q psy7834 82 GKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDIIHVGGSIEDIPEG 146 (492)
Q Consensus 82 ~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~l~~~ 146 (492)
++|+++|+++.+++.|+++....++......+++++++|+...+...++||+|++....+++.+.
T Consensus 103 ~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~ 167 (226)
T 1i1n_A 103 GKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVVPQA 167 (226)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEECSBBSSCCHH
T ss_pred cEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEEECCchHHHHHH
Confidence 79999999999999999998765420000158999999998766666789999998887765543
No 27
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.61 E-value=3.7e-15 Score=137.83 Aligned_cols=116 Identities=18% Similarity=0.169 Sum_probs=90.6
Q ss_pred HHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccC
Q psy7834 197 VHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDG 276 (492)
Q Consensus 197 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~ 276 (492)
....+++.+. ..++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.|++++...+.......+++++++|+
T Consensus 17 ~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 93 (217)
T 3jwh_A 17 RMNGVVAALK--QSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL 93 (217)
T ss_dssp HHHHHHHHHH--HTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT
T ss_pred HHHHHHHHHH--hcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc
Confidence 3455556554 4567899999999999999999875 567999999999999999999875431000012799999998
Q ss_pred CCCCcCCCCccEEEecCcchhhHH--------HHHHHhccCCeEEEE
Q psy7834 277 REGHAAEGPYDVIYVGGAVHHYPF--------KLMDQLKPGGVMWFT 315 (492)
Q Consensus 277 ~~~~~~~~~fD~i~s~~~~~~~~~--------~~~~~L~pgG~l~~~ 315 (492)
.......++||+|++..+++++++ ++.++|||||.+++.
T Consensus 94 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 94 TYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp TSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred ccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 765555679999999999988763 678999999976664
No 28
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.60 E-value=3.3e-15 Score=137.85 Aligned_cols=111 Identities=23% Similarity=0.349 Sum_probs=91.6
Q ss_pred HHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCC
Q psy7834 198 HAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGR 277 (492)
Q Consensus 198 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 277 (492)
...+++.+. .+++ +|||+|||+|.++..+++. +..+|+|+|+|+.|++.|++++...+ ...+++++++|+.
T Consensus 33 ~~~~~~~~~--~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~----~~~~~~~~~~d~~ 103 (219)
T 3dlc_A 33 AENIINRFG--ITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADAN----LNDRIQIVQGDVH 103 (219)
T ss_dssp HHHHHHHHC--CCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECBTT
T ss_pred HHHHHHhcC--CCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhcc----ccCceEEEEcCHH
Confidence 344444443 3445 9999999999999999988 45689999999999999999988754 2357999999998
Q ss_pred CCCcCCCCccEEEecCcchhhH------HHHHHHhccCCeEEEEeC
Q psy7834 278 EGHAAEGPYDVIYVGGAVHHYP------FKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 278 ~~~~~~~~fD~i~s~~~~~~~~------~~~~~~L~pgG~l~~~~~ 317 (492)
+.+.++++||+|+++.++++++ .++.++|||||++++...
T Consensus 104 ~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 104 NIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp BCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HCCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEec
Confidence 8776778999999999998875 388999999999999753
No 29
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.60 E-value=3.4e-15 Score=140.37 Aligned_cols=112 Identities=20% Similarity=0.294 Sum_probs=95.0
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEc
Q psy7834 195 PKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDG 274 (492)
Q Consensus 195 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~ 274 (492)
+.....+++.+. +.++.+|||+|||+|.++..+++.. + +|+|+|+|+.|++.|++++...+ ..+++++++
T Consensus 7 ~~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~ 76 (239)
T 1xxl_A 7 HHSLGLMIKTAE--CRAEHRVLDIGAGAGHTALAFSPYV-Q--ECIGVDATKEMVEVASSFAQEKG-----VENVRFQQG 76 (239)
T ss_dssp HHHHHHHHHHHT--CCTTCEEEEESCTTSHHHHHHGGGS-S--EEEEEESCHHHHHHHHHHHHHHT-----CCSEEEEEC
T ss_pred CCCcchHHHHhC--cCCCCEEEEEccCcCHHHHHHHHhC-C--EEEEEECCHHHHHHHHHHHHHcC-----CCCeEEEec
Confidence 344456667775 7889999999999999999999875 3 79999999999999999987753 357999999
Q ss_pred cCCCCCcCCCCccEEEecCcchhhH------HHHHHHhccCCeEEEEe
Q psy7834 275 DGREGHAAEGPYDVIYVGGAVHHYP------FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 275 d~~~~~~~~~~fD~i~s~~~~~~~~------~~~~~~L~pgG~l~~~~ 316 (492)
|+...+..+++||+|++..+++|++ .++.++|||||++++..
T Consensus 77 d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 77 TAESLPFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp BTTBCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccCCCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEE
Confidence 9987766778999999999998876 38899999999999964
No 30
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.60 E-value=2.3e-15 Score=142.34 Aligned_cols=104 Identities=15% Similarity=0.044 Sum_probs=81.2
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhh--------CCCC----CCCCcEEEEEccC
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTY--------YPNL----MEGGRVQFVDGDG 276 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~--------~~~~----~~~~~v~~~~~d~ 276 (492)
..++.+|||+|||+|..+..|++++ .+|+|+|+|+.|++.|+++.... .... ....+++++++|+
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~~G---~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~ 142 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFADRG---HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI 142 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHTT---CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred CCCCCeEEEeCCCCcHHHHHHHHCC---CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence 3578899999999999999999874 37999999999999998765310 0000 0125799999999
Q ss_pred CCCCcCC-CCccEEEecCcchhhH--------HHHHHHhccCCeEEEE
Q psy7834 277 REGHAAE-GPYDVIYVGGAVHHYP--------FKLMDQLKPGGVMWFT 315 (492)
Q Consensus 277 ~~~~~~~-~~fD~i~s~~~~~~~~--------~~~~~~L~pgG~l~~~ 315 (492)
.+.+..+ ++||+|++..++++++ .++.++|||||++++.
T Consensus 143 ~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 143 FDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp TTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 8866543 7999999998887764 2688999999999753
No 31
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.60 E-value=2.9e-15 Score=143.18 Aligned_cols=113 Identities=23% Similarity=0.282 Sum_probs=93.6
Q ss_pred HHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccC
Q psy7834 197 VHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDG 276 (492)
Q Consensus 197 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~ 276 (492)
....+++.+. .++++.+|||||||+|.++..+++. +.++|+|+|+|+.|++.|++++...+ ..++++++++|+
T Consensus 33 ~~~~~l~~l~-~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~ 105 (267)
T 3kkz_A 33 VTLKALSFID-NLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSG----LQNRVTGIVGSM 105 (267)
T ss_dssp HHHHHHTTCC-CCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECCT
T ss_pred HHHHHHHhcc-cCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcC----CCcCcEEEEcCh
Confidence 3444444443 3567899999999999999999987 45689999999999999999988754 235699999999
Q ss_pred CCCCcCCCCccEEEecCcchhhH-----HHHHHHhccCCeEEEEe
Q psy7834 277 REGHAAEGPYDVIYVGGAVHHYP-----FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 277 ~~~~~~~~~fD~i~s~~~~~~~~-----~~~~~~L~pgG~l~~~~ 316 (492)
.+.+.++++||+|++..+++++. .++.++|||||++++..
T Consensus 106 ~~~~~~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 106 DDLPFRNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp TSCCCCTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred hhCCCCCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEE
Confidence 87766678999999999998873 37889999999999975
No 32
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.60 E-value=5.6e-15 Score=143.49 Aligned_cols=114 Identities=22% Similarity=0.193 Sum_probs=94.2
Q ss_pred HHHHHHHHH--hccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEcc
Q psy7834 198 HAQALEILK--DYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGD 275 (492)
Q Consensus 198 ~~~~~~~l~--~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d 275 (492)
...+++.+. ..+.++.+|||+|||+|.++..+++..+ .+|+|+|+|+.|++.|+++....+ ...+++++++|
T Consensus 67 ~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~----~~~~~~~~~~d 140 (297)
T 2o57_A 67 DEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAG----LADNITVKYGS 140 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHT----CTTTEEEEECC
T ss_pred HHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcC----CCcceEEEEcC
Confidence 344555551 1257789999999999999999999863 489999999999999999987764 23579999999
Q ss_pred CCCCCcCCCCccEEEecCcchhhH------HHHHHHhccCCeEEEEeC
Q psy7834 276 GREGHAAEGPYDVIYVGGAVHHYP------FKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 276 ~~~~~~~~~~fD~i~s~~~~~~~~------~~~~~~L~pgG~l~~~~~ 317 (492)
+.+.+.++++||+|++..+++|++ .++.++|||||++++..+
T Consensus 141 ~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 141 FLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp TTSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 988777778999999999998875 388999999999999753
No 33
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.60 E-value=6.2e-15 Score=134.11 Aligned_cols=106 Identities=23% Similarity=0.348 Sum_probs=88.3
Q ss_pred ccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC-cCCCCc
Q psy7834 208 YLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH-AAEGPY 286 (492)
Q Consensus 208 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~f 286 (492)
.++++.+|||+|||+|.++..+++..++.++|+|+|+|+.|++.|++++..++ ...+++++++|+.+.. ..+++|
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~f 94 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN----LIDRVTLIKDGHQNMDKYIDCPV 94 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT----CGGGEEEECSCGGGGGGTCCSCE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCCeEEEECCHHHHhhhccCCc
Confidence 47889999999999999999999997667899999999999999999998753 1257999999987654 345789
Q ss_pred cEEEecCcc---------------hhhHHHHHHHhccCCeEEEEeC
Q psy7834 287 DVIYVGGAV---------------HHYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 287 D~i~s~~~~---------------~~~~~~~~~~L~pgG~l~~~~~ 317 (492)
|+|+++..+ ..+..++.++|||||++++.+.
T Consensus 95 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 95 KAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 999988654 1234588999999999999764
No 34
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.60 E-value=4e-15 Score=141.23 Aligned_cols=114 Identities=23% Similarity=0.313 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEcc
Q psy7834 196 KVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGD 275 (492)
Q Consensus 196 ~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d 275 (492)
.....+++.+. .++++.+|||+|||+|.++..+++..+ ++|+|+|+|+.+++.|++++...+ ...+++++++|
T Consensus 32 ~~~~~~l~~l~-~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~~d 104 (257)
T 3f4k_A 32 EATRKAVSFIN-ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKAN----CADRVKGITGS 104 (257)
T ss_dssp HHHHHHHTTSC-CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECC
T ss_pred HHHHHHHHHHh-cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcC----CCCceEEEECC
Confidence 34444454442 356788999999999999999999863 389999999999999999998764 23469999999
Q ss_pred CCCCCcCCCCccEEEecCcchhhH-----HHHHHHhccCCeEEEEe
Q psy7834 276 GREGHAAEGPYDVIYVGGAVHHYP-----FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 276 ~~~~~~~~~~fD~i~s~~~~~~~~-----~~~~~~L~pgG~l~~~~ 316 (492)
+...+.++++||+|+++.+++++. .++.++|||||++++..
T Consensus 105 ~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 105 MDNLPFQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp TTSCSSCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhCCCCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence 987766778999999999998863 37889999999999975
No 35
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.59 E-value=5.1e-15 Score=141.87 Aligned_cols=102 Identities=25% Similarity=0.373 Sum_probs=88.9
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.|++++...+ ...+++++.+|+.+.+.++++||+
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~fD~ 132 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAG----LANRVTFSYADAMDLPFEDASFDA 132 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECCTTSCCSCTTCEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcC----CCcceEEEECccccCCCCCCCccE
Confidence 4678999999999999999999875 4589999999999999999988754 234799999999887767789999
Q ss_pred EEecCcchhhHH------HHHHHhccCCeEEEEe
Q psy7834 289 IYVGGAVHHYPF------KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 289 i~s~~~~~~~~~------~~~~~L~pgG~l~~~~ 316 (492)
|++..+++|+++ ++.++|||||++++..
T Consensus 133 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 133 VWALESLHHMPDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 999999988853 7889999999999965
No 36
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.59 E-value=2e-15 Score=139.38 Aligned_cols=130 Identities=35% Similarity=0.556 Sum_probs=109.3
Q ss_pred CcccCCCCCCC----CCccccccccccCCcccCCccccccchhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHH
Q psy7834 1 MLAVDRGHYTT----WRPYANCITNIGYGAHMQAPFQDNTKFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAW 76 (492)
Q Consensus 1 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~ 76 (492)
|+.|||..|+| ..+|.+.++++..++.++.|.. .+.+++.+ .+.++.+|||+|||+|.++..+++
T Consensus 29 ~~~~~r~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~---------~~~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~ 97 (215)
T 2yxe_A 29 LLKVPREEFLPEHLKEYAYVDTPLEIGYGQTISAIHM---------VGMMCELL--DLKPGMKVLEIGTGCGYHAAVTAE 97 (215)
T ss_dssp HHHSCGGGGSCGGGGGGTTSCSCEEEETTEEECCHHH---------HHHHHHHT--TCCTTCEEEEECCTTSHHHHHHHH
T ss_pred HHhCCHHHcCCchhhhhcccCCCccCCCCcEeCcHHH---------HHHHHHhh--CCCCCCEEEEECCCccHHHHHHHH
Confidence 35789999998 5578888888888888888776 67788877 778899999999999999999999
Q ss_pred HhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccceeccCcccccccc
Q psy7834 77 CVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDIIHVGGSIEDIPEG 146 (492)
Q Consensus 77 ~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~l~~~ 146 (492)
..++..+|+++|+++.+++.|+++....++ .+++++++|+.......++||+|+++..++++.+.
T Consensus 98 ~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~ 162 (215)
T 2yxe_A 98 IVGEDGLVVSIERIPELAEKAERTLRKLGY-----DNVIVIVGDGTLGYEPLAPYDRIYTTAAGPKIPEP 162 (215)
T ss_dssp HHCTTSEEEEEESCHHHHHHHHHHHHHHTC-----TTEEEEESCGGGCCGGGCCEEEEEESSBBSSCCHH
T ss_pred HhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CCeEEEECCcccCCCCCCCeeEEEECCchHHHHHH
Confidence 986667999999999999999999887776 67999999986543336789999999888876543
No 37
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.59 E-value=5.6e-15 Score=136.80 Aligned_cols=117 Identities=18% Similarity=0.200 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEcc
Q psy7834 196 KVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGD 275 (492)
Q Consensus 196 ~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d 275 (492)
.....+.+.+. ..++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.|++++...+.......+++++++|
T Consensus 16 ~~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 92 (219)
T 3jwg_A 16 QRLGTVVAVLK--SVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSS 92 (219)
T ss_dssp HHHHHHHHHHH--HTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECC
T ss_pred HHHHHHHHHHh--hcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCc
Confidence 33455556554 3567899999999999999999875 55799999999999999999986542100001279999999
Q ss_pred CCCCCcCCCCccEEEecCcchhhHH--------HHHHHhccCCeEEEE
Q psy7834 276 GREGHAAEGPYDVIYVGGAVHHYPF--------KLMDQLKPGGVMWFT 315 (492)
Q Consensus 276 ~~~~~~~~~~fD~i~s~~~~~~~~~--------~~~~~L~pgG~l~~~ 315 (492)
+.......++||+|++..+++++++ ++.++|||||.++..
T Consensus 93 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 93 LVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp SSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred ccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 9766656789999999999988873 578999999965553
No 38
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.58 E-value=3.2e-15 Score=140.52 Aligned_cols=107 Identities=21% Similarity=0.322 Sum_probs=90.3
Q ss_pred HHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC
Q psy7834 201 ALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH 280 (492)
Q Consensus 201 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 280 (492)
+++.+...++++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|+++.. ..+++++++|+.+.+
T Consensus 43 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~~ 111 (242)
T 3l8d_A 43 IIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERGE--------GPDLSFIKGDLSSLP 111 (242)
T ss_dssp HHHHHHHHSCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTTC--------BTTEEEEECBTTBCS
T ss_pred HHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhcc--------cCCceEEEcchhcCC
Confidence 44555555778899999999999999999987 3479999999999999988742 247999999998877
Q ss_pred cCCCCccEEEecCcchhhHH------HHHHHhccCCeEEEEeCC
Q psy7834 281 AAEGPYDVIYVGGAVHHYPF------KLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 281 ~~~~~fD~i~s~~~~~~~~~------~~~~~L~pgG~l~~~~~~ 318 (492)
.++++||+|++..+++|+++ ++.++|+|||++++....
T Consensus 112 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 112 FENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp SCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcC
Confidence 67789999999999987763 789999999999998643
No 39
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.57 E-value=1.2e-14 Score=141.30 Aligned_cols=104 Identities=15% Similarity=0.129 Sum_probs=88.2
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCC-----
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAE----- 283 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~----- 283 (492)
..++.+|||+|||+|.++..+++...+..+|+|+|+|+.|++.|++++...+ ....+++++++|+.+.+...
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~~v~~~~~d~~~~~~~~~~~~~ 110 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSP---DTYKNVSFKISSSDDFKFLGADSVD 110 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC----CCTTEEEEECCTTCCGGGCTTTTT
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcc---CCCCceEEEEcCHHhCCcccccccc
Confidence 3578899999999999999999875467899999999999999999987741 02458999999998766555
Q ss_pred -CCccEEEecCcchhhH-----HHHHHHhccCCeEEEE
Q psy7834 284 -GPYDVIYVGGAVHHYP-----FKLMDQLKPGGVMWFT 315 (492)
Q Consensus 284 -~~fD~i~s~~~~~~~~-----~~~~~~L~pgG~l~~~ 315 (492)
++||+|+++.++||+. .++.++|||||+|++.
T Consensus 111 ~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 111 KQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp SSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEE
Confidence 7999999999998872 2789999999999883
No 40
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.57 E-value=8.5e-15 Score=135.76 Aligned_cols=99 Identities=12% Similarity=0.158 Sum_probs=83.8
Q ss_pred CCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCC-CcEEEEEccCCCCCc--CCCCccE
Q psy7834 212 GAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEG-GRVQFVDGDGREGHA--AEGPYDV 288 (492)
Q Consensus 212 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~--~~~~fD~ 288 (492)
+.+|||||||+|+.+..+++..++.++|+++|+|++|++.|+++++..+ .. .+++++++|+.+... .+++||+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g----~~~~~i~~~~gda~~~l~~~~~~~fD~ 132 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG----YSPSRVRFLLSRPLDVMSRLANDSYQL 132 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT----CCGGGEEEECSCHHHHGGGSCTTCEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCcCcEEEEEcCHHHHHHHhcCCCcCe
Confidence 3499999999999999999987668899999999999999999998864 22 479999999865432 2578999
Q ss_pred EEecCcchhhH---HHHHHHhccCCeEEE
Q psy7834 289 IYVGGAVHHYP---FKLMDQLKPGGVMWF 314 (492)
Q Consensus 289 i~s~~~~~~~~---~~~~~~L~pgG~l~~ 314 (492)
|++.....+.+ +++.++|||||++++
T Consensus 133 V~~d~~~~~~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 133 VFGQVSPMDLKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp EEECCCTTTHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEcCcHHHHHHHHHHHHHHcCCCcEEEE
Confidence 99988765544 588999999999998
No 41
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.57 E-value=5.6e-15 Score=140.76 Aligned_cols=99 Identities=26% Similarity=0.335 Sum_probs=87.0
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|+++.... .+++++++|+.+.+.++++||+
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~~~~~~~~fD~ 123 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN-------NKIIFEANDILTKEFPENNFDL 123 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC-------TTEEEEECCTTTCCCCTTCEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC-------CCeEEEECccccCCCCCCcEEE
Confidence 5678899999999999999999986 458999999999999999876541 5799999999887767789999
Q ss_pred EEecCcchhh--HH------HHHHHhccCCeEEEEe
Q psy7834 289 IYVGGAVHHY--PF------KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 289 i~s~~~~~~~--~~------~~~~~L~pgG~l~~~~ 316 (492)
|++..+++|+ .+ ++.++|||||++++..
T Consensus 124 v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 124 IYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999999998 43 7899999999999975
No 42
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.57 E-value=2.5e-14 Score=131.97 Aligned_cols=103 Identities=17% Similarity=0.219 Sum_probs=87.4
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC--cCCCCcc
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH--AAEGPYD 287 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD 287 (492)
.++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.|++++...+ ..+++++++|+.+.+ .++++||
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~D 113 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVG-----VPNIKLLWVDGSDLTDYFEDGEID 113 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHC-----CSSEEEEECCSSCGGGTSCTTCCS
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcC-----CCCEEEEeCCHHHHHhhcCCCCCC
Confidence 457899999999999999999986 67899999999999999999998764 358999999997754 4567899
Q ss_pred EEEecCcch--------------hhHHHHHHHhccCCeEEEEeCC
Q psy7834 288 VIYVGGAVH--------------HYPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 288 ~i~s~~~~~--------------~~~~~~~~~L~pgG~l~~~~~~ 318 (492)
+|+++...+ .+..++.++|+|||.+++.+..
T Consensus 114 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 114 RLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC
T ss_pred EEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 999987653 2456889999999999997643
No 43
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.57 E-value=8.3e-15 Score=137.02 Aligned_cols=100 Identities=20% Similarity=0.320 Sum_probs=86.7
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
..++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.|++++... .+++++++|+.+.+.. ++||+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~~~~~-~~fD~ 112 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGN-------LKVKYIEADYSKYDFE-EKYDM 112 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSC-------TTEEEEESCTTTCCCC-SCEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccC-------CCEEEEeCchhccCCC-CCceE
Confidence 4567899999999999999999986 6779999999999999999987652 3799999999876655 79999
Q ss_pred EEecCcchhhHH--------HHHHHhccCCeEEEEeC
Q psy7834 289 IYVGGAVHHYPF--------KLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 289 i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~~ 317 (492)
|++..+++++++ ++.++|||||++++...
T Consensus 113 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 113 VVSALSIHHLEDEDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 999999988763 67899999999999753
No 44
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.57 E-value=9e-15 Score=139.16 Aligned_cols=111 Identities=18% Similarity=0.201 Sum_probs=91.6
Q ss_pred HHHHHHHHHH---HhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE
Q psy7834 196 KVHAQALEIL---KDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV 272 (492)
Q Consensus 196 ~~~~~~~~~l---~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~ 272 (492)
.....+++.+ ...+.++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|++++.. ...+++++
T Consensus 21 ~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~ 91 (263)
T 2yqz_A 21 EVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKIAG------VDRKVQVV 91 (263)
T ss_dssp HHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHTTT------SCTTEEEE
T ss_pred HHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHhhc------cCCceEEE
Confidence 3445556665 224677899999999999999999876 34899999999999999998722 24579999
Q ss_pred EccCCCCCcCCCCccEEEecCcchhhHH------HHHHHhccCCeEEEE
Q psy7834 273 DGDGREGHAAEGPYDVIYVGGAVHHYPF------KLMDQLKPGGVMWFT 315 (492)
Q Consensus 273 ~~d~~~~~~~~~~fD~i~s~~~~~~~~~------~~~~~L~pgG~l~~~ 315 (492)
++|+.+.+.++++||+|++..+++++++ ++.++|||||++++.
T Consensus 92 ~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 92 QADARAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp ESCTTSCCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred EcccccCCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 9999876666789999999999998853 788999999999986
No 45
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.57 E-value=1.8e-14 Score=140.29 Aligned_cols=99 Identities=23% Similarity=0.237 Sum_probs=86.4
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
++++.+|||||||+|.++..+++..+ .+|+|+|+|+.|++.|++++...+ ...+++++.+|+.+. +++||+
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~---~~~fD~ 140 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVD----SPRRKEVRIQGWEEF---DEPVDR 140 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSC----CSSCEEEEECCGGGC---CCCCSE
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcC----CCCceEEEECCHHHc---CCCccE
Confidence 56789999999999999999999864 589999999999999999998754 234799999999764 678999
Q ss_pred EEecCcchhh------------H---HHHHHHhccCCeEEEEe
Q psy7834 289 IYVGGAVHHY------------P---FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 289 i~s~~~~~~~------------~---~~~~~~L~pgG~l~~~~ 316 (492)
|++..+++++ . .++.++|||||++++..
T Consensus 141 v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 141 IVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp EEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred EEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999999888 2 37889999999999965
No 46
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.56 E-value=2e-14 Score=133.39 Aligned_cols=115 Identities=25% Similarity=0.260 Sum_probs=87.3
Q ss_pred HHHHHHHHHHH-hccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEc
Q psy7834 196 KVHAQALEILK-DYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDG 274 (492)
Q Consensus 196 ~~~~~~~~~l~-~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~ 274 (492)
...+.++..+. -.+++|.+|||+|||+|.++..+++.+++.++|+|+|+|+.|++...+.+++. .|+.++++
T Consensus 60 kla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-------~nv~~i~~ 132 (232)
T 3id6_C 60 KLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-------PNIFPLLA 132 (232)
T ss_dssp HHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-------TTEEEEEC
T ss_pred HHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-------CCeEEEEc
Confidence 33444444443 13678999999999999999999999888999999999999986655544431 47999999
Q ss_pred cCCCCCc---CCCCccEEEecCcchhhHH----HHHHHhccCCeEEEEeC
Q psy7834 275 DGREGHA---AEGPYDVIYVGGAVHHYPF----KLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 275 d~~~~~~---~~~~fD~i~s~~~~~~~~~----~~~~~L~pgG~l~~~~~ 317 (492)
|+..... ..++||+|+++.+...... .+.+.|||||+|++++.
T Consensus 133 Da~~~~~~~~~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 133 DARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp CTTCGGGTTTTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccchhhhccccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 9875321 2468999999987754432 44569999999999763
No 47
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.56 E-value=2.8e-14 Score=132.63 Aligned_cols=112 Identities=21% Similarity=0.295 Sum_probs=91.8
Q ss_pred HHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCC
Q psy7834 198 HAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGR 277 (492)
Q Consensus 198 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 277 (492)
...+.+.+...++++.+|||+|||+|.++..+++.. + +|+|+|+|+.|++.|+++....+ .+++++++|+.
T Consensus 25 ~~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~ 95 (227)
T 1ve3_A 25 IETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYG-F--EVVGVDISEDMIRKAREYAKSRE------SNVEFIVGDAR 95 (227)
T ss_dssp HHHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHTT------CCCEEEECCTT
T ss_pred HHHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcC-C--EEEEEECCHHHHHHHHHHHHhcC------CCceEEECchh
Confidence 344556666566778999999999999999999875 4 89999999999999999987642 57899999998
Q ss_pred CCCcCCCCccEEEecCc--chhhH------HHHHHHhccCCeEEEEeCC
Q psy7834 278 EGHAAEGPYDVIYVGGA--VHHYP------FKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 278 ~~~~~~~~fD~i~s~~~--~~~~~------~~~~~~L~pgG~l~~~~~~ 318 (492)
+...++++||+|+++.+ +++.. .++.++|||||++++..+.
T Consensus 96 ~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 96 KLSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp SCCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 76556679999999988 54443 3788999999999997654
No 48
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.56 E-value=1.8e-14 Score=132.45 Aligned_cols=100 Identities=21% Similarity=0.203 Sum_probs=80.4
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC---CcCCCC
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG---HAAEGP 285 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~ 285 (492)
+++|.+|||+|||+|.++..+++.++ .++|+|+|+|+.|++.+.++++.. .++.++.+|+... ....++
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~-------~~v~~~~~d~~~~~~~~~~~~~ 126 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER-------NNIIPLLFDASKPWKYSGIVEK 126 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC-------SSEEEECSCTTCGGGTTTTCCC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC-------CCeEEEEcCCCCchhhcccccc
Confidence 56789999999999999999999875 779999999999988777666542 3789999998653 122378
Q ss_pred ccEEEecCcchhh----HHHHHHHhccCCeEEEEe
Q psy7834 286 YDVIYVGGAVHHY----PFKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 286 fD~i~s~~~~~~~----~~~~~~~L~pgG~l~~~~ 316 (492)
||+|+++...+.. ..++.++|||||++++.+
T Consensus 127 fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 127 VDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 9999998544322 358899999999999975
No 49
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.56 E-value=1.2e-14 Score=140.38 Aligned_cols=116 Identities=19% Similarity=0.289 Sum_probs=94.4
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEc
Q psy7834 195 PKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDG 274 (492)
Q Consensus 195 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~ 274 (492)
+.....+++.+. .+.++.+|||+|||+|.++..+++..+...+|+|+|+|+.|++.|++++...+ .+++++++
T Consensus 7 ~~~~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~------~~v~~~~~ 79 (284)
T 3gu3_A 7 DDYVSFLVNTVW-KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP------YDSEFLEG 79 (284)
T ss_dssp HHHHHHHHHTTS-CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS------SEEEEEES
T ss_pred hHHHHHHHHHHh-ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC------CceEEEEc
Confidence 344445554443 25678899999999999999999887435799999999999999999987642 37999999
Q ss_pred cCCCCCcCCCCccEEEecCcchhhHH------HHHHHhccCCeEEEEeCC
Q psy7834 275 DGREGHAAEGPYDVIYVGGAVHHYPF------KLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 275 d~~~~~~~~~~fD~i~s~~~~~~~~~------~~~~~L~pgG~l~~~~~~ 318 (492)
|+.+.+. +++||+|++..+++++++ ++.++|||||++++..+.
T Consensus 80 d~~~~~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 80 DATEIEL-NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CTTTCCC-SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred chhhcCc-CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 9987554 568999999999988763 789999999999997654
No 50
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.55 E-value=9.4e-15 Score=140.28 Aligned_cols=103 Identities=25% Similarity=0.365 Sum_probs=91.0
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||||||+|.++..+++.. +..+|+|+|+|+.+++.|++++...+ .++++++.+|+...+.++++||+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~ 108 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNG-----IKNVKFLQANIFSLPFEDSSFDH 108 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEECCGGGCCSCTTCEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC-----CCCcEEEEcccccCCCCCCCeeE
Confidence 4678999999999999999999985 67899999999999999999988753 35799999999877767789999
Q ss_pred EEecCcchhhHH------HHHHHhccCCeEEEEeC
Q psy7834 289 IYVGGAVHHYPF------KLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 289 i~s~~~~~~~~~------~~~~~L~pgG~l~~~~~ 317 (492)
|+++.+++++++ ++.++|||||++++..+
T Consensus 109 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 109 IFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 999999988763 78999999999999764
No 51
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.55 E-value=7.8e-15 Score=138.18 Aligned_cols=107 Identities=18% Similarity=0.307 Sum_probs=88.9
Q ss_pred HHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCC
Q psy7834 198 HAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGR 277 (492)
Q Consensus 198 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 277 (492)
...+++.+.. ..++.+|||||||+|.++..+++.. + +|+|+|+|+.|++.|+++... +++++++|+.
T Consensus 30 ~~~~~~~l~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~gvD~s~~~~~~a~~~~~~---------~v~~~~~d~~ 96 (250)
T 2p7i_A 30 HPFMVRAFTP-FFRPGNLLELGSFKGDFTSRLQEHF-N--DITCVEASEEAISHAQGRLKD---------GITYIHSRFE 96 (250)
T ss_dssp HHHHHHHHGG-GCCSSCEEEESCTTSHHHHHHTTTC-S--CEEEEESCHHHHHHHHHHSCS---------CEEEEESCGG
T ss_pred HHHHHHHHHh-hcCCCcEEEECCCCCHHHHHHHHhC-C--cEEEEeCCHHHHHHHHHhhhC---------CeEEEEccHH
Confidence 3556666653 3467899999999999999998874 3 699999999999999987532 6899999987
Q ss_pred CCCcCCCCccEEEecCcchhhHH------HHH-HHhccCCeEEEEeCC
Q psy7834 278 EGHAAEGPYDVIYVGGAVHHYPF------KLM-DQLKPGGVMWFTIGN 318 (492)
Q Consensus 278 ~~~~~~~~fD~i~s~~~~~~~~~------~~~-~~L~pgG~l~~~~~~ 318 (492)
+. .++++||+|++..+++|+++ ++. ++|||||++++.++.
T Consensus 97 ~~-~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 97 DA-QLPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp GC-CCSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred Hc-CcCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 75 45678999999999998863 789 999999999998754
No 52
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.55 E-value=1.4e-14 Score=135.53 Aligned_cols=116 Identities=19% Similarity=0.310 Sum_probs=92.7
Q ss_pred cChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE
Q psy7834 193 SSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV 272 (492)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~ 272 (492)
..+.....+...+. ..++.+|||+|||+|+.+..+++.. +.++|+++|+|+.+++.|++++...+ ..++++++
T Consensus 55 ~~~~~~~~l~~~~~--~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~ 127 (232)
T 3ntv_A 55 VDRLTLDLIKQLIR--MNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYH----FENQVRII 127 (232)
T ss_dssp CCHHHHHHHHHHHH--HHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTT----CTTTEEEE
T ss_pred cCHHHHHHHHHHHh--hcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEE
Confidence 34555555555554 4567899999999999999999854 67899999999999999999998764 23489999
Q ss_pred EccCCCCCc--CCCCccEEEecCcchhhH---HHHHHHhccCCeEEEE
Q psy7834 273 DGDGREGHA--AEGPYDVIYVGGAVHHYP---FKLMDQLKPGGVMWFT 315 (492)
Q Consensus 273 ~~d~~~~~~--~~~~fD~i~s~~~~~~~~---~~~~~~L~pgG~l~~~ 315 (492)
++|+.+... .+++||+|+++......+ +++.++|||||++++.
T Consensus 128 ~~d~~~~~~~~~~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 128 EGNALEQFENVNDKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp ESCGGGCHHHHTTSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred ECCHHHHHHhhccCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 999976433 257899999987765554 5888999999999883
No 53
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.55 E-value=1.3e-13 Score=137.72 Aligned_cols=254 Identities=14% Similarity=0.118 Sum_probs=148.1
Q ss_pred HHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC
Q psy7834 45 MVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG 124 (492)
Q Consensus 45 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 124 (492)
.+++.+. ....+.+||.++.+-|.+++.++.. .++.+.=|--.....+.|++.+++. ..++++...- .
T Consensus 28 ~ll~~~~-~~~~~~~~~~~~d~~gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~---~~~~~~~~~~-~-- 95 (375)
T 4dcm_A 28 YLLQQLD-DTEIRGPVLILNDAFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGID---ESSVKFLDST-A-- 95 (375)
T ss_dssp HHHHTTT-TCCCCSCEEEECCSSSHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCC---GGGSEEEETT-S--
T ss_pred HHHHhhh-hccCCCCEEEECCCCCHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCC---ccceEecccc-c--
Confidence 4444432 2234568999999999999999753 3456643554556677888888873 1246665432 1
Q ss_pred CCCCCcccceeccCccc--cc-------ccchhccc--c-------cChhHHHHHHhcccc------------ccccccc
Q psy7834 125 YLDEAPYDIIHVGGSIE--DI-------PEGVRFGH--I-------ASPKVESVMRSIDRR------------RFIERPI 174 (492)
Q Consensus 125 ~~~~~~~D~i~~~~~~~--~l-------~~~L~~~~--l-------~~~~~~~a~~~v~r~------------~f~~~~~ 174 (492)
.....||+|+.-.... .+ ...+.++. + ......+.+...... .+.....
T Consensus 96 -~~~~~~~~v~~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~g~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~~~~ 174 (375)
T 4dcm_A 96 -DYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE 174 (375)
T ss_dssp -CCCSSCSEEEEECCSCHHHHHHHHHHHHTTCCTTSEEEEEEEGGGCCHHHHHHHHHHTCCEEECCCBTTEEEEEECCCC
T ss_pred -ccccCCCEEEEEcCCCHHHHHHHHHHHHhhCCCCCEEEEEecccchHHHHHHHHHhhcCccchhhhhceeEEEEEeCCC
Confidence 2246789888854332 11 11111110 0 001222222221110 0110000
Q ss_pred cC---CC----C--CCCCcccCC-CCcccCh---HHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEE
Q psy7834 175 MN---NP----Y--WDIPQSLGF-GSVMSSP---KVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYA 241 (492)
Q Consensus 175 ~~---~~----y--~d~~~~~~~-~~~~~~~---~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~g 241 (492)
.. .. | .+..+.+.. ....+.. .....+++.+. ..++.+|||+|||+|.++..+++.. |..+|+|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~pg~Fs~~~~d~~~~~ll~~l~--~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~g 251 (375)
T 4dcm_A 175 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLP--ENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVF 251 (375)
T ss_dssp CCCCCCCSCEEEEETTTTEEEEECTTCTTCSSCCHHHHHHHHTCC--CSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEE
T ss_pred CCCCCCCCceEEEecCCceEEEeCCCcccCCcccHHHHHHHHhCc--ccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEE
Confidence 00 00 0 000010100 0001111 11223444443 3446899999999999999999986 6789999
Q ss_pred EeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEEEecCcchh-----------hHHHHHHHhccCC
Q psy7834 242 VEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIYVGGAVHH-----------YPFKLMDQLKPGG 310 (492)
Q Consensus 242 iD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~s~~~~~~-----------~~~~~~~~L~pgG 310 (492)
+|+|+.|++.|++++..++.. ...+++|+.+|+.+ ..+.++||+|+++..+|+ +..++.+.|||||
T Consensus 252 vD~s~~al~~Ar~n~~~ngl~--~~~~v~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG 328 (375)
T 4dcm_A 252 VDESPMAVASSRLNVETNMPE--ALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING 328 (375)
T ss_dssp EESCHHHHHHHHHHHHHHCGG--GGGGEEEEECSTTT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEE
T ss_pred EECcHHHHHHHHHHHHHcCCC--cCceEEEEechhhc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999886411 11258999999976 345678999999988763 2358889999999
Q ss_pred eEEEEeC
Q psy7834 311 VMWFTIG 317 (492)
Q Consensus 311 ~l~~~~~ 317 (492)
++++.+.
T Consensus 329 ~l~iv~n 335 (375)
T 4dcm_A 329 ELYIVAN 335 (375)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999764
No 54
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.55 E-value=1.2e-14 Score=146.47 Aligned_cols=106 Identities=23% Similarity=0.335 Sum_probs=90.1
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhh-----CCCCCCCCcEEEEEccCCCC----
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTY-----YPNLMEGGRVQFVDGDGREG---- 279 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~-----~~~~~~~~~v~~~~~d~~~~---- 279 (492)
+.++.+|||+|||+|.++..+++..++.++|+|+|+|+.|++.|++++... +. ....+++++++|+.+.
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~--~~~~~v~~~~~d~~~l~~~~ 158 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGS--PSRSNVRFLKGFIENLATAE 158 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSS--TTCCCEEEEESCTTCGGGCB
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccc--cCCCceEEEEccHHHhhhcc
Confidence 457889999999999999999999877889999999999999999987653 10 0125899999999875
Q ss_pred --CcCCCCccEEEecCcchhhH------HHHHHHhccCCeEEEEe
Q psy7834 280 --HAAEGPYDVIYVGGAVHHYP------FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 280 --~~~~~~fD~i~s~~~~~~~~------~~~~~~L~pgG~l~~~~ 316 (492)
+.++++||+|+++.++++++ .++.++|||||+|++..
T Consensus 159 ~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 159 PEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp SCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 55678999999999998875 38899999999999975
No 55
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.55 E-value=2.5e-14 Score=129.33 Aligned_cols=118 Identities=18% Similarity=0.132 Sum_probs=91.7
Q ss_pred ChHHHHHHHHHHHhcc-CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE
Q psy7834 194 SPKVHAQALEILKDYL-KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV 272 (492)
Q Consensus 194 ~~~~~~~~~~~l~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~ 272 (492)
...+.+.+++.+.... .++.+|||+|||+|.++..+++. ...+|+|+|+|+.|++.|++++..++ ..+++++
T Consensus 26 ~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~v~~~ 98 (189)
T 3p9n_A 26 TDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALG-----LSGATLR 98 (189)
T ss_dssp CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHT-----CSCEEEE
T ss_pred cHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcC-----CCceEEE
Confidence 3344556666665321 46889999999999999988875 34589999999999999999998864 3579999
Q ss_pred EccCCCCCc--CCCCccEEEecCcchhh-H------HHHHH--HhccCCeEEEEeCC
Q psy7834 273 DGDGREGHA--AEGPYDVIYVGGAVHHY-P------FKLMD--QLKPGGVMWFTIGN 318 (492)
Q Consensus 273 ~~d~~~~~~--~~~~fD~i~s~~~~~~~-~------~~~~~--~L~pgG~l~~~~~~ 318 (492)
++|+.+... .+++||+|+++..+++. . .++.+ +|+|||++++....
T Consensus 99 ~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 99 RGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp ESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred EccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 999865432 35789999999887663 1 36677 99999999997643
No 56
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.55 E-value=4.1e-14 Score=138.41 Aligned_cols=102 Identities=14% Similarity=0.062 Sum_probs=88.6
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||+|||+|.++..++++. ..+|+|+|+|+.|++.|++++...+ ...+++++++|+.+.+.++++||+
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~fD~ 188 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELR----IDDHVRSRVCNMLDTPFDKGAVTA 188 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECCTTSCCCCTTCEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcC----CCCceEEEECChhcCCCCCCCEeE
Confidence 4578899999999999999999985 3589999999999999999998764 234799999999877667789999
Q ss_pred EEecCcchhhH-----HHHHHHhccCCeEEEEe
Q psy7834 289 IYVGGAVHHYP-----FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 289 i~s~~~~~~~~-----~~~~~~L~pgG~l~~~~ 316 (492)
|++..++++++ .++.++|||||++++..
T Consensus 189 V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 189 SWNNESTMYVDLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCchhhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 99999988774 38899999999999865
No 57
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.55 E-value=1.5e-14 Score=139.66 Aligned_cols=102 Identities=23% Similarity=0.327 Sum_probs=86.5
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC-cCCCCccE
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH-AAEGPYDV 288 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~ 288 (492)
.++.+|||||||+|.++..+++. ..+|+|+|+|+.|++.|++++...+ ...+++++++|+.+.+ ..+++||+
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~fD~ 139 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKG----VSDNMQFIHCAAQDVASHLETPVDL 139 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-C----CGGGEEEEESCGGGTGGGCSSCEEE
T ss_pred CCCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcC----CCcceEEEEcCHHHhhhhcCCCceE
Confidence 44679999999999999999987 3479999999999999999987653 1257999999998765 45789999
Q ss_pred EEecCcchhhH------HHHHHHhccCCeEEEEeCC
Q psy7834 289 IYVGGAVHHYP------FKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 289 i~s~~~~~~~~------~~~~~~L~pgG~l~~~~~~ 318 (492)
|++..++++++ .++.++|||||++++.+..
T Consensus 140 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 140 ILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred EEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 99999998876 3889999999999997643
No 58
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.55 E-value=6e-14 Score=133.02 Aligned_cols=122 Identities=27% Similarity=0.300 Sum_probs=99.0
Q ss_pred cccChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEE
Q psy7834 191 VMSSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQ 270 (492)
Q Consensus 191 ~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~ 270 (492)
....|.....++..+. +.++.+|||+|||+|.++..+++..++.++|+++|+|+++++.|++++...+ ...+++
T Consensus 75 ~~~~~~~~~~i~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~----~~~~v~ 148 (255)
T 3mb5_A 75 QIVHPKDAALIVAYAG--ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG----FDDRVT 148 (255)
T ss_dssp CCCCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT----CTTTEE
T ss_pred ccccHhHHHHHHHhhC--CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC----CCCceE
Confidence 3345555556666554 6789999999999999999999997678899999999999999999998764 123599
Q ss_pred EEEccCCCCCcCCCCccEEEecCcch-hhHHHHHHHhccCCeEEEEeCCC
Q psy7834 271 FVDGDGREGHAAEGPYDVIYVGGAVH-HYPFKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 271 ~~~~d~~~~~~~~~~fD~i~s~~~~~-~~~~~~~~~L~pgG~l~~~~~~~ 319 (492)
++++|+.+. .++++||+|+++..-. .+..++.++|+|||++++..+..
T Consensus 149 ~~~~d~~~~-~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 149 IKLKDIYEG-IEEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp EECSCGGGC-CCCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred EEECchhhc-cCCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEECCH
Confidence 999999764 4567899999986554 36679999999999999987554
No 59
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.55 E-value=1e-14 Score=134.87 Aligned_cols=104 Identities=17% Similarity=0.141 Sum_probs=86.6
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC---CcCCCCc
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG---HAAEGPY 286 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~f 286 (492)
.++.+|||||||+|.++..+|+.. +..+|+|+|+|+.|++.|++++...+ ..|++++++|+.+. ..++++|
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~-----l~nv~~~~~Da~~~l~~~~~~~~~ 106 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEG-----LSNLRVMCHDAVEVLHKMIPDNSL 106 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTT-----CSSEEEECSCHHHHHHHHSCTTCE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhC-----CCcEEEEECCHHHHHHHHcCCCCh
Confidence 467899999999999999999986 77899999999999999999988753 45899999998764 1457899
Q ss_pred cEEEecCcch--------------hhHHHHHHHhccCCeEEEEeCCC
Q psy7834 287 DVIYVGGAVH--------------HYPFKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 287 D~i~s~~~~~--------------~~~~~~~~~L~pgG~l~~~~~~~ 319 (492)
|.|+++...+ .+.+++.++|||||++++.+...
T Consensus 107 d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~ 153 (218)
T 3dxy_A 107 RMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE 153 (218)
T ss_dssp EEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred heEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCH
Confidence 9999884432 14568899999999999987543
No 60
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.54 E-value=3.9e-14 Score=149.76 Aligned_cols=138 Identities=16% Similarity=0.148 Sum_probs=102.1
Q ss_pred CCCCCCcccCCCCcccChH---HHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Q psy7834 178 PYWDIPQSLGFGSVMSSPK---VHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANK 254 (492)
Q Consensus 178 ~y~d~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~ 254 (492)
.|.+.+.+.........|. ....+++.+. ..++.+|||||||+|.++..|++..++..+|+|+|+|+.|++.|++
T Consensus 687 ay~dea~p~me~gtFsPPL~eqRle~LLelL~--~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~ARe 764 (950)
T 3htx_A 687 GVKGPSEERMEAAFFKPPLSKQRVEYALKHIR--ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAK 764 (950)
T ss_dssp EEECSCCCCCCCCCSSSCHHHHHHHHHHHHHH--HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHH
T ss_pred ccccchhhHHhhCcCCchHHHHHHHHHHHHhc--ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHH
Confidence 3444444433333333343 2334455554 3478899999999999999999886555799999999999999999
Q ss_pred HHHhhCCC-CCCCCcEEEEEccCCCCCcCCCCccEEEecCcchhhHH--------HHHHHhccCCeEEEEeCC
Q psy7834 255 SMHTYYPN-LMEGGRVQFVDGDGREGHAAEGPYDVIYVGGAVHHYPF--------KLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 255 ~~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~fD~i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~~~ 318 (492)
++...... ..+..+++|+++|+.+.+..+++||+|++..+++|+++ ++.++|||| .++++++.
T Consensus 765 RLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 765 MLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp HHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred HhhhccchhhcCCCceEEEECchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 77643100 01345899999999888777789999999999999874 568999999 88887754
No 61
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.54 E-value=1e-14 Score=141.40 Aligned_cols=114 Identities=24% Similarity=0.352 Sum_probs=86.2
Q ss_pred HHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCC-------------------
Q psy7834 202 LEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPN------------------- 262 (492)
Q Consensus 202 ~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~------------------- 262 (492)
++.+.....++.+|||||||+|.++..+++.+ +..+|+|+|+|+.|++.|++++...+..
T Consensus 37 l~~l~~~~~~~~~VLDiGCG~G~~~~~la~~~-~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (292)
T 3g07_A 37 LRVLKPEWFRGRDVLDLGCNVGHLTLSIACKW-GPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEE 115 (292)
T ss_dssp GGTSCGGGTTTSEEEEESCTTCHHHHHHHHHT-CCSEEEEEESCHHHHHHHHHTC-------------------------
T ss_pred HHhhhhhhcCCCcEEEeCCCCCHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccc
Confidence 33343334468899999999999999999987 4569999999999999999987653210
Q ss_pred ----------------------------------CCCCCcEEEEEccCCCCC-----cCCCCccEEEecCcchhhH----
Q psy7834 263 ----------------------------------LMEGGRVQFVDGDGREGH-----AAEGPYDVIYVGGAVHHYP---- 299 (492)
Q Consensus 263 ----------------------------------~~~~~~v~~~~~d~~~~~-----~~~~~fD~i~s~~~~~~~~---- 299 (492)
.....+++|+++|+.... ...++||+|++..+++|+.
T Consensus 116 ~~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~ 195 (292)
T 3g07_A 116 GTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWG 195 (292)
T ss_dssp --------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHH
T ss_pred ccccccccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCC
Confidence 000147999999987543 2467899999999986662
Q ss_pred --------HHHHHHhccCCeEEEEe
Q psy7834 300 --------FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 300 --------~~~~~~L~pgG~l~~~~ 316 (492)
.+++++|||||+|++..
T Consensus 196 ~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 196 DEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEec
Confidence 27889999999999964
No 62
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.54 E-value=2.1e-14 Score=132.90 Aligned_cols=104 Identities=25% Similarity=0.280 Sum_probs=87.4
Q ss_pred HHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCC
Q psy7834 199 AQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGRE 278 (492)
Q Consensus 199 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 278 (492)
..+++.+. ..++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|+++.. .+++++++|+.+
T Consensus 35 ~~~l~~~~--~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~d~~~ 100 (220)
T 3hnr_A 35 EDILEDVV--NKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP---------KEFSITEGDFLS 100 (220)
T ss_dssp HHHHHHHH--HTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC---------TTCCEESCCSSS
T ss_pred HHHHHHhh--ccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC---------CceEEEeCChhh
Confidence 45566665 457889999999999999999987 3489999999999999998754 268899999987
Q ss_pred CCcCCCCccEEEecCcchhhHH--------HHHHHhccCCeEEEEeC
Q psy7834 279 GHAAEGPYDVIYVGGAVHHYPF--------KLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 279 ~~~~~~~fD~i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~~ 317 (492)
.+.. ++||+|+++.+++++++ ++.++|||||++++..+
T Consensus 101 ~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 101 FEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp CCCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred cCCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 6655 89999999999988764 77899999999999753
No 63
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.54 E-value=1.2e-14 Score=136.26 Aligned_cols=127 Identities=31% Similarity=0.434 Sum_probs=106.3
Q ss_pred CcccCCCCCCC----CCccccccccccCCcccCCccccccchhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHH
Q psy7834 1 MLAVDRGHYTT----WRPYANCITNIGYGAHMQAPFQDNTKFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAW 76 (492)
Q Consensus 1 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~ 76 (492)
|+.|||..|+| ..+|.+.++++..++.++.|.. .+.+++.+ .+.++.+|||+|||+|.++..+++
T Consensus 43 ~~~v~r~~f~~~~~~~~~y~~~~~~~~~~~~~~~~~~---------~~~~~~~l--~~~~~~~vLdiG~G~G~~~~~la~ 111 (235)
T 1jg1_A 43 FLKYPRYLSVEDKYKKYAHIDEPLPIPAGQTVSAPHM---------VAIMLEIA--NLKPGMNILEVGTGSGWNAALISE 111 (235)
T ss_dssp HHHSCGGGGSCGGGGGGTTSSSCEECSTTCEECCHHH---------HHHHHHHH--TCCTTCCEEEECCTTSHHHHHHHH
T ss_pred HHhCCHhhhCCchhhhcCccCCCcccCCCceeccHHH---------HHHHHHhc--CCCCCCEEEEEeCCcCHHHHHHHH
Confidence 35689999999 4578888888887877777766 77888888 788899999999999999999999
Q ss_pred HhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCC-CcccceeccCcccccccc
Q psy7834 77 CVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDE-APYDIIHVGGSIEDIPEG 146 (492)
Q Consensus 77 ~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~D~i~~~~~~~~l~~~ 146 (492)
..+ .+|+++|+++.+++.|+++....++ .+++++++|+. .+++. .+||+|+++..++.+.+.
T Consensus 112 ~~~--~~v~~vD~~~~~~~~a~~~~~~~~~-----~~v~~~~~d~~-~~~~~~~~fD~Ii~~~~~~~~~~~ 174 (235)
T 1jg1_A 112 IVK--TDVYTIERIPELVEFAKRNLERAGV-----KNVHVILGDGS-KGFPPKAPYDVIIVTAGAPKIPEP 174 (235)
T ss_dssp HHC--SCEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEESCGG-GCCGGGCCEEEEEECSBBSSCCHH
T ss_pred HhC--CEEEEEeCCHHHHHHHHHHHHHcCC-----CCcEEEECCcc-cCCCCCCCccEEEECCcHHHHHHH
Confidence 974 7999999999999999999988887 57999999983 33433 459999999888766543
No 64
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.54 E-value=1.1e-14 Score=142.78 Aligned_cols=130 Identities=29% Similarity=0.509 Sum_probs=106.9
Q ss_pred CcccCCCCCCC-----CCccccccc-cccCC---cccCCccccccchhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHH
Q psy7834 1 MLAVDRGHYTT-----WRPYANCIT-NIGYG---AHMQAPFQDNTKFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFT 71 (492)
Q Consensus 1 ~~~~~~~~~~~-----~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~ 71 (492)
|+.|||..|.| ..+|.+.+. ++..+ +.++.|.. .+.+++.+ .+.++.+|||+|||+|.++
T Consensus 22 ~~~vpr~~fl~~~~~y~~~y~~~~~~~l~~~~f~q~~~~~~~---------~~~l~~~l--~~~~~~~VLDiGcG~G~~~ 90 (317)
T 1dl5_A 22 FLEIPREEFLTKSYPLSYVYEDIVLVSYDDGEEYSTSSQPSL---------MALFMEWV--GLDKGMRVLEIGGGTGYNA 90 (317)
T ss_dssp HHHSCGGGGCSSCCCHHHHTSSSCEEEEECSSCEEEECCHHH---------HHHHHHHT--TCCTTCEEEEECCTTSHHH
T ss_pred HHhCCHHHhCCchhccccCccCCCcccccCCCcceeccCHHH---------HHHHHHhc--CCCCcCEEEEecCCchHHH
Confidence 46789999998 236777776 76666 55555544 67777877 7889999999999999999
Q ss_pred HHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccceeccCcccccccc
Q psy7834 72 ALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDIIHVGGSIEDIPEG 146 (492)
Q Consensus 72 ~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~l~~~ 146 (492)
..+++..++.++|+++|+|+++++.|+++++..++ .+++++++|+.+.+...++||+|++...++++.+.
T Consensus 91 ~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~-----~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~~~ 160 (317)
T 1dl5_A 91 AVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI-----ENVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVPET 160 (317)
T ss_dssp HHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEESCGGGCCGGGCCEEEEEECSBBSCCCHH
T ss_pred HHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCeEEEECChhhccccCCCeEEEEEcCCHHHHHHH
Confidence 99999874347899999999999999999988887 57999999998866556789999999888876543
No 65
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.54 E-value=9.3e-15 Score=138.79 Aligned_cols=97 Identities=22% Similarity=0.345 Sum_probs=85.0
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.|+++. ++++++++|+.+.+ .+++||+
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~~~~-~~~~fD~ 98 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADRL----------PNTNFGKADLATWK-PAQKADL 98 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHS----------TTSEEEECCTTTCC-CSSCEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC----------CCcEEEECChhhcC-ccCCcCE
Confidence 4567899999999999999999987 5678999999999999999872 36899999998766 6788999
Q ss_pred EEecCcchhhHH------HHHHHhccCCeEEEEeC
Q psy7834 289 IYVGGAVHHYPF------KLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 289 i~s~~~~~~~~~------~~~~~L~pgG~l~~~~~ 317 (492)
|+++.+++|+++ ++.++|||||++++.++
T Consensus 99 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 99 LYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp EEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 999999998863 78899999999999874
No 66
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.54 E-value=3.4e-14 Score=130.30 Aligned_cols=110 Identities=19% Similarity=0.215 Sum_probs=87.8
Q ss_pred HHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCC
Q psy7834 199 AQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGRE 278 (492)
Q Consensus 199 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 278 (492)
...++.+. ...++.+|||+|||+|.++..++.. +..+|+|+|+|+.|++.|++++...+ .+++++++|+.+
T Consensus 12 ~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~ 82 (209)
T 2p8j_A 12 YRFLKYCN-ESNLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRENN------FKLNISKGDIRK 82 (209)
T ss_dssp HHHHHHHH-HSSSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHHHT------CCCCEEECCTTS
T ss_pred HHHHHHHh-ccCCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHhcC------CceEEEECchhh
Confidence 44455554 3567889999999999985544444 34589999999999999999987653 368899999987
Q ss_pred CCcCCCCccEEEecCcchhhH--------HHHHHHhccCCeEEEEeC
Q psy7834 279 GHAAEGPYDVIYVGGAVHHYP--------FKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 279 ~~~~~~~fD~i~s~~~~~~~~--------~~~~~~L~pgG~l~~~~~ 317 (492)
.+.++++||+|++..+++|++ .++.++|||||++++.+.
T Consensus 83 ~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 83 LPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp CCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 666678999999999888873 278899999999999764
No 67
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.54 E-value=3.4e-14 Score=131.02 Aligned_cols=103 Identities=17% Similarity=0.291 Sum_probs=85.6
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC--cCCCCcc
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH--AAEGPYD 287 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD 287 (492)
.++.+|||||||+|.++..+|+.. +..+|+|+|+|+.|++.|++++...+ ..+++++++|+.... .++++||
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~-----~~nv~~~~~d~~~l~~~~~~~~~d 110 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSE-----AQNVKLLNIDADTLTDVFEPGEVK 110 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSC-----CSSEEEECCCGGGHHHHCCTTSCC
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcC-----CCCEEEEeCCHHHHHhhcCcCCcC
Confidence 457899999999999999999986 67899999999999999999988753 458999999987643 3567899
Q ss_pred EEEecCcch--------------hhHHHHHHHhccCCeEEEEeCC
Q psy7834 288 VIYVGGAVH--------------HYPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 288 ~i~s~~~~~--------------~~~~~~~~~L~pgG~l~~~~~~ 318 (492)
.|+++...+ .+.+++.++|||||.+++.+..
T Consensus 111 ~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 111 RVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC
T ss_pred EEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC
Confidence 998875432 2346889999999999998743
No 68
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.54 E-value=1e-14 Score=134.71 Aligned_cols=99 Identities=16% Similarity=0.264 Sum_probs=85.0
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
..++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++.... ++++++++|+.+.+ ++++||+
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~~~-~~~~fD~ 117 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRW-------SHISWAATDILQFS-TAELFDL 117 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTC-------SSEEEEECCTTTCC-CSCCEEE
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccC-------CCeEEEEcchhhCC-CCCCccE
Confidence 3457899999999999999999875 37999999999999999987652 37999999998765 5789999
Q ss_pred EEecCcchhhHH---------HHHHHhccCCeEEEEeCC
Q psy7834 289 IYVGGAVHHYPF---------KLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 289 i~s~~~~~~~~~---------~~~~~L~pgG~l~~~~~~ 318 (492)
|+++.+++|+++ ++.++|||||.+++.++.
T Consensus 118 v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 118 IVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp EEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 999999988762 678999999999997643
No 69
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.54 E-value=2e-14 Score=132.24 Aligned_cols=111 Identities=19% Similarity=0.217 Sum_probs=90.0
Q ss_pred HHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc
Q psy7834 202 LEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA 281 (492)
Q Consensus 202 ~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 281 (492)
++.+...+++|.+|||||||+|+++..+++.. +.++|+|+|+++.+++.|++|++.++ ...+++++++|+.+...
T Consensus 6 L~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~g----l~~~i~~~~~d~l~~l~ 80 (225)
T 3kr9_A 6 LELVASFVSQGAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAHG----LKEKIQVRLANGLAAFE 80 (225)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTT----CTTTEEEEECSGGGGCC
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEEECchhhhcc
Confidence 44555567889999999999999999999875 77899999999999999999999875 23479999999865443
Q ss_pred CCCCccEEEecCc----chhhHHHHHHHhccCCeEEEEeC
Q psy7834 282 AEGPYDVIYVGGA----VHHYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 282 ~~~~fD~i~s~~~----~~~~~~~~~~~L~pgG~l~~~~~ 317 (492)
+..+||+|++..+ ++.+.++..+.|+|+|+|+++-.
T Consensus 81 ~~~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 81 ETDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp GGGCCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred cCcCCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 3337999886543 35556678889999999999654
No 70
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.53 E-value=7.9e-15 Score=143.06 Aligned_cols=110 Identities=17% Similarity=0.214 Sum_probs=90.5
Q ss_pred HHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcC
Q psy7834 203 EILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAA 282 (492)
Q Consensus 203 ~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 282 (492)
..+...++++.+|||||||+|.++..++....+..+|+|+|+|+.|++.|++++...+ ...+++++++|+.+.+.+
T Consensus 110 ~~l~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~ 185 (305)
T 3ocj_A 110 RALQRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA----LAGQITLHRQDAWKLDTR 185 (305)
T ss_dssp HHHHHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST----TGGGEEEEECCGGGCCCC
T ss_pred HHHHhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC----CCCceEEEECchhcCCcc
Confidence 3334447889999999999999999996434467899999999999999999987653 224599999999876655
Q ss_pred CCCccEEEecCcchhhH---------HHHHHHhccCCeEEEEeC
Q psy7834 283 EGPYDVIYVGGAVHHYP---------FKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 283 ~~~fD~i~s~~~~~~~~---------~~~~~~L~pgG~l~~~~~ 317 (492)
++||+|+++.++++++ .++.++|||||++++...
T Consensus 186 -~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 186 -EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp -SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred -CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 8999999999888764 377899999999999753
No 71
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.53 E-value=2.5e-14 Score=131.79 Aligned_cols=111 Identities=19% Similarity=0.231 Sum_probs=90.7
Q ss_pred HHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc
Q psy7834 202 LEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA 281 (492)
Q Consensus 202 ~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 281 (492)
++.+...+++|.+|||||||+|+++..+++.. +..+|+|+|+++.+++.|++|++.++ ...+++++++|+.+...
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~~al~~A~~N~~~~g----l~~~I~~~~gD~l~~~~ 86 (230)
T 3lec_A 12 LQKVANYVPKGARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVNGPYQSALKNVSEHG----LTSKIDVRLANGLSAFE 86 (230)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSHHHHHHHHHHHHHTT----CTTTEEEEECSGGGGCC
T ss_pred HHHHHHhCCCCCEEEEECCchHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEECchhhccc
Confidence 34555668889999999999999999999884 67789999999999999999999875 23579999999987665
Q ss_pred CCCCccEEEecCc----chhhHHHHHHHhccCCeEEEEeC
Q psy7834 282 AEGPYDVIYVGGA----VHHYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 282 ~~~~fD~i~s~~~----~~~~~~~~~~~L~pgG~l~~~~~ 317 (492)
+.++||+|++... +..+.++..+.|+++|+|+++-.
T Consensus 87 ~~~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 87 EADNIDTITICGMGGRLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp GGGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred cccccCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEECC
Confidence 5457999886554 34555677788999999999753
No 72
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.53 E-value=1.4e-14 Score=127.97 Aligned_cols=105 Identities=12% Similarity=0.088 Sum_probs=84.0
Q ss_pred HHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc
Q psy7834 202 LEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA 281 (492)
Q Consensus 202 ~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 281 (492)
.+.+...+++..+|||+|||+|.++..++... |..+|+|+|+|+.|++.+++++..++. ..++++ .|.... .
T Consensus 40 Y~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~-p~a~~~A~Di~~~~leiar~~~~~~g~----~~~v~~--~d~~~~-~ 111 (200)
T 3fzg_A 40 YTYVFGNIKHVSSILDFGCGFNPLALYQWNEN-EKIIYHAYDIDRAEIAFLSSIIGKLKT----TIKYRF--LNKESD-V 111 (200)
T ss_dssp HHHHHHHSCCCSEEEEETCTTHHHHHHHHCSS-CCCEEEEECSCHHHHHHHHHHHHHSCC----SSEEEE--ECCHHH-H
T ss_pred HHHHHhhcCCCCeEEEecCCCCHHHHHHHhcC-CCCEEEEEeCCHHHHHHHHHHHHhcCC----CccEEE--eccccc-C
Confidence 33333346778899999999999999998775 677999999999999999999988652 125666 565443 4
Q ss_pred CCCCccEEEecCcchhhHH------HHHHHhccCCeEEE
Q psy7834 282 AEGPYDVIYVGGAVHHYPF------KLMDQLKPGGVMWF 314 (492)
Q Consensus 282 ~~~~fD~i~s~~~~~~~~~------~~~~~L~pgG~l~~ 314 (492)
+.++||+|++...+|++.+ ++++.|+|||.++-
T Consensus 112 ~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 112 YKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp TTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEE
T ss_pred CCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEE
Confidence 5678999999999999964 78999999987764
No 73
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.53 E-value=3.2e-14 Score=134.70 Aligned_cols=98 Identities=21% Similarity=0.298 Sum_probs=85.1
Q ss_pred CCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEEE
Q psy7834 211 PGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIY 290 (492)
Q Consensus 211 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 290 (492)
++.+|||+|||+|.++..+++.. + .+|+|+|+|+.|++.|+++.. ..+++++++|+...+.++++||+|+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~~~~~~~fD~v~ 113 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHG-A-KKVLGIDLSERMLTEAKRKTT--------SPVVCYEQKAIEDIAIEPDAYNVVL 113 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-C-SEEEEEESCHHHHHHHHHHCC--------CTTEEEEECCGGGCCCCTTCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcC-C-CEEEEEECCHHHHHHHHHhhc--------cCCeEEEEcchhhCCCCCCCeEEEE
Confidence 68899999999999999999885 2 389999999999999998864 2479999999987766678999999
Q ss_pred ecCcchhhH------HHHHHHhccCCeEEEEeCC
Q psy7834 291 VGGAVHHYP------FKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 291 s~~~~~~~~------~~~~~~L~pgG~l~~~~~~ 318 (492)
+..++++++ .++.++|||||++++.+..
T Consensus 114 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 114 SSLALHYIASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 999998875 3889999999999997643
No 74
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.53 E-value=6e-14 Score=134.93 Aligned_cols=128 Identities=25% Similarity=0.320 Sum_probs=103.3
Q ss_pred CCCcccChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhh-CCCCCCC
Q psy7834 188 FGSVMSSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTY-YPNLMEG 266 (492)
Q Consensus 188 ~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~-~~~~~~~ 266 (492)
.+..+..|.....++..+. +.++.+|||+|||+|.++..+++..++.++|+++|+|+.+++.|++++... +. ..
T Consensus 78 ~~~~~~~~~~~~~i~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~---~~ 152 (280)
T 1i9g_A 78 RGPQVIYPKDAAQIVHEGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ---PP 152 (280)
T ss_dssp SCSCCCCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS---CC
T ss_pred ccceeecHHHHHHHHHHcC--CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC---CC
Confidence 3445566766677777664 778999999999999999999998767789999999999999999998764 20 13
Q ss_pred CcEEEEEccCCCCCcCCCCccEEEecCcch-hhHHHHHHHhccCCeEEEEeCCCc
Q psy7834 267 GRVQFVDGDGREGHAAEGPYDVIYVGGAVH-HYPFKLMDQLKPGGVMWFTIGNAE 320 (492)
Q Consensus 267 ~~v~~~~~d~~~~~~~~~~fD~i~s~~~~~-~~~~~~~~~L~pgG~l~~~~~~~~ 320 (492)
.+++++++|+.+.+.++++||+|+++..-. .+..++.++|+|||++++.++..+
T Consensus 153 ~~v~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 207 (280)
T 1i9g_A 153 DNWRLVVSDLADSELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVATVT 207 (280)
T ss_dssp TTEEEECSCGGGCCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESSHH
T ss_pred CcEEEEECchHhcCCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCCHH
Confidence 579999999977655567899999876433 556799999999999999887644
No 75
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.53 E-value=2e-14 Score=135.76 Aligned_cols=109 Identities=10% Similarity=0.206 Sum_probs=80.0
Q ss_pred HHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCC
Q psy7834 198 HAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGR 277 (492)
Q Consensus 198 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 277 (492)
...+++.+. +.++.+|||||||+|.++..++++. .+|+|+|+|+.|++.|++++... ..+..+...+..
T Consensus 34 ~~~il~~l~--l~~g~~VLDlGcGtG~~a~~La~~g---~~V~gvD~S~~ml~~Ar~~~~~~------~v~~~~~~~~~~ 102 (261)
T 3iv6_A 34 RENDIFLEN--IVPGSTVAVIGASTRFLIEKALERG---ASVTVFDFSQRMCDDLAEALADR------CVTIDLLDITAE 102 (261)
T ss_dssp HHHHHHTTT--CCTTCEEEEECTTCHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTSSS------CCEEEECCTTSC
T ss_pred HHHHHHhcC--CCCcCEEEEEeCcchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHhc------cceeeeeecccc
Confidence 345555554 6788999999999999999999874 47999999999999999987542 112222222220
Q ss_pred CCCcCCCCccEEEecCcchhhHH--------HHHHHhccCCeEEEEeCC
Q psy7834 278 EGHAAEGPYDVIYVGGAVHHYPF--------KLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 278 ~~~~~~~~fD~i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~~~ 318 (492)
.....+++||+|+++.+++|++. ++.++| |||++++++..
T Consensus 103 ~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 103 IPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp CCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred cccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 01122568999999999987642 677889 99999998754
No 76
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.53 E-value=4.7e-14 Score=136.21 Aligned_cols=100 Identities=19% Similarity=0.187 Sum_probs=85.0
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||||||+|.++..+++..+. +|+|+|+|+.+++.|++++...+ ...+++++.+|+.+.+ ++||+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvd~s~~~~~~a~~~~~~~~----~~~~~~~~~~d~~~~~---~~fD~ 132 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDV--NVVGLTLSKNQANHVQQLVANSE----NLRSKRVLLAGWEQFD---EPVDR 132 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHTCC----CCSCEEEEESCGGGCC---CCCSE
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC----CCCCeEEEECChhhCC---CCeeE
Confidence 567889999999999999999977633 89999999999999999987653 2357999999986543 78999
Q ss_pred EEecCcchhhH--------HHHHHHhccCCeEEEEeC
Q psy7834 289 IYVGGAVHHYP--------FKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 289 i~s~~~~~~~~--------~~~~~~L~pgG~l~~~~~ 317 (492)
|++..+++|++ .++.++|||||++++...
T Consensus 133 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 133 IVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp EEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 99999998883 278899999999999753
No 77
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.53 E-value=7.1e-14 Score=130.34 Aligned_cols=103 Identities=24% Similarity=0.414 Sum_probs=84.2
Q ss_pred ccCCCCceEEEecc-ccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC-CcCCCC
Q psy7834 208 YLKPGAKVLDIGSG-SGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG-HAAEGP 285 (492)
Q Consensus 208 ~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~ 285 (492)
.++++.+|||+||| +|.++..+++.. ..+|+|+|+|+.|++.|++++..++ . +++++++|+... ...+++
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-----~-~v~~~~~d~~~~~~~~~~~ 123 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNN-----S-NVRLVKSNGGIIKGVVEGT 123 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTT-----C-CCEEEECSSCSSTTTCCSC
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhC-----C-CcEEEeCCchhhhhcccCc
Confidence 46789999999999 999999999986 4689999999999999999998864 2 789999996432 223578
Q ss_pred ccEEEecCcch-------------------------hhHHHHHHHhccCCeEEEEeCC
Q psy7834 286 YDVIYVGGAVH-------------------------HYPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 286 fD~i~s~~~~~-------------------------~~~~~~~~~L~pgG~l~~~~~~ 318 (492)
||+|+++..++ .+..++.++|||||++++.++.
T Consensus 124 fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 181 (230)
T 3evz_A 124 FDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD 181 (230)
T ss_dssp EEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES
T ss_pred eeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc
Confidence 99999986542 2335788999999999997643
No 78
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.52 E-value=3.5e-14 Score=132.56 Aligned_cols=107 Identities=21% Similarity=0.327 Sum_probs=88.4
Q ss_pred ccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCcc
Q psy7834 208 YLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYD 287 (492)
Q Consensus 208 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 287 (492)
.++++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|++++...+.......+++++.+|+...+..+++||
T Consensus 27 ~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 103 (235)
T 3sm3_A 27 YLQEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFD 103 (235)
T ss_dssp HCCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEE
T ss_pred hCCCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCcee
Confidence 3678899999999999999999987 3489999999999999999987644211112468999999987766778999
Q ss_pred EEEecCcchhhH---------HHHHHHhccCCeEEEEeC
Q psy7834 288 VIYVGGAVHHYP---------FKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 288 ~i~s~~~~~~~~---------~~~~~~L~pgG~l~~~~~ 317 (492)
+|++..++++++ .++.++|||||++++...
T Consensus 104 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 104 FAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp EEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 999999888774 267899999999999753
No 79
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.52 E-value=2.6e-14 Score=132.55 Aligned_cols=103 Identities=18% Similarity=0.280 Sum_probs=83.3
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC-cCC----
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH-AAE---- 283 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~---- 283 (492)
..++.+|||+|||+|..+..+++..++.++|+++|+|+.|++.|++++...+ ...+++++++|+.+.. ...
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~l~~~~~~~~ 131 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG----LQDKVTILNGASQDLIPQLKKKYD 131 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT----CGGGEEEEESCHHHHGGGTTTTSC
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC----CCCceEEEECCHHHHHHHHHHhcC
Confidence 3467899999999999999999977567899999999999999999998864 2346999999975422 112
Q ss_pred -CCccEEEecCcchhhHH--HHH---HHhccCCeEEEE
Q psy7834 284 -GPYDVIYVGGAVHHYPF--KLM---DQLKPGGVMWFT 315 (492)
Q Consensus 284 -~~fD~i~s~~~~~~~~~--~~~---~~L~pgG~l~~~ 315 (492)
++||+|++....++..+ ++. ++|||||++++.
T Consensus 132 ~~~fD~V~~d~~~~~~~~~~~~~~~~~~LkpgG~lv~~ 169 (221)
T 3u81_A 132 VDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLAD 169 (221)
T ss_dssp CCCCSEEEECSCGGGHHHHHHHHHHTTCCCTTCEEEES
T ss_pred CCceEEEEEcCCcccchHHHHHHHhccccCCCeEEEEe
Confidence 68999999987776654 121 799999999984
No 80
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.52 E-value=1.6e-13 Score=130.17 Aligned_cols=123 Identities=28% Similarity=0.347 Sum_probs=100.2
Q ss_pred CcccChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhh-CCCCCCCCc
Q psy7834 190 SVMSSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTY-YPNLMEGGR 268 (492)
Q Consensus 190 ~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~-~~~~~~~~~ 268 (492)
.....|.....+++.+. +.++.+|||+|||+|.++..+++..++.++|+++|+|+.+++.|++++..+ + ..+
T Consensus 77 ~~~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-----~~~ 149 (258)
T 2pwy_A 77 ATPTYPKDASAMVTLLD--LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-----VEN 149 (258)
T ss_dssp SCCCCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-----CCC
T ss_pred cccccchHHHHHHHHcC--CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-----CCC
Confidence 34445555566666654 678999999999999999999998767789999999999999999998875 4 357
Q ss_pred EEEEEccCCCCCcCCCCccEEEecCcch-hhHHHHHHHhccCCeEEEEeCCC
Q psy7834 269 VQFVDGDGREGHAAEGPYDVIYVGGAVH-HYPFKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 269 v~~~~~d~~~~~~~~~~fD~i~s~~~~~-~~~~~~~~~L~pgG~l~~~~~~~ 319 (492)
++++++|+.+.+.++++||+|+++..-. .+..++.++|+|||++++..+..
T Consensus 150 v~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 150 VRFHLGKLEEAELEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp EEEEESCGGGCCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred EEEEECchhhcCCCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 9999999977645567899999875433 56679999999999999988654
No 81
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.52 E-value=6e-14 Score=129.39 Aligned_cols=106 Identities=25% Similarity=0.387 Sum_probs=87.5
Q ss_pred HHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCC
Q psy7834 199 AQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGRE 278 (492)
Q Consensus 199 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 278 (492)
..+++.+. .+.++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|++ . +..+++++++|+.+
T Consensus 35 ~~~~~~l~-~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~-----~~~~~~~~~~d~~~ 101 (218)
T 3ou2_A 35 PAALERLR-AGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----H-----GLDNVEFRQQDLFD 101 (218)
T ss_dssp HHHHHHHT-TTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----G-----CCTTEEEEECCTTS
T ss_pred HHHHHHHh-cCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----c-----CCCCeEEEeccccc
Confidence 44555554 3567789999999999999999988 3489999999999999987 1 23579999999987
Q ss_pred CCcCCCCccEEEecCcchhhHH--------HHHHHhccCCeEEEEeCC
Q psy7834 279 GHAAEGPYDVIYVGGAVHHYPF--------KLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 279 ~~~~~~~fD~i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~~~ 318 (492)
. ..+++||+|+++.+++++++ ++.++|||||++++....
T Consensus 102 ~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 102 W-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp C-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred C-CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 6 56789999999999988764 678999999999997643
No 82
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.52 E-value=3.2e-14 Score=132.15 Aligned_cols=111 Identities=17% Similarity=0.210 Sum_probs=90.8
Q ss_pred HHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc
Q psy7834 202 LEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA 281 (492)
Q Consensus 202 ~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 281 (492)
++.+...+++|.+|||||||+|+++..+++.. +..+|+|+|+++.+++.|++|++.++ ...+++++++|+.+...
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~g----l~~~I~v~~gD~l~~~~ 86 (244)
T 3gnl_A 12 LEKVASYITKNERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVDGPFQSAQKQVRSSG----LTEQIDVRKGNGLAVIE 86 (244)
T ss_dssp HHHHHTTCCSSEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTT----CTTTEEEEECSGGGGCC
T ss_pred HHHHHHhCCCCCEEEEECCccHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEEecchhhccC
Confidence 44555668889999999999999999999874 67789999999999999999999875 23469999999877655
Q ss_pred CCCCccEEEecCc----chhhHHHHHHHhccCCeEEEEeC
Q psy7834 282 AEGPYDVIYVGGA----VHHYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 282 ~~~~fD~i~s~~~----~~~~~~~~~~~L~pgG~l~~~~~ 317 (492)
+..+||+|++..+ +..+.++..+.|+++|+|+++-.
T Consensus 87 ~~~~~D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 87 KKDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp GGGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred ccccccEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 4446999886543 45566678889999999999753
No 83
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.52 E-value=5.4e-14 Score=128.73 Aligned_cols=112 Identities=16% Similarity=0.168 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEcc
Q psy7834 196 KVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGD 275 (492)
Q Consensus 196 ~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d 275 (492)
.....+++.+...+.++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|++++...+ ..+++++++|
T Consensus 45 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d 117 (205)
T 3grz_A 45 QTTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNG-----IYDIALQKTS 117 (205)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTT-----CCCCEEEESS
T ss_pred ccHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcC-----CCceEEEecc
Confidence 3445666666656778899999999999999998875 35689999999999999999998753 3358999999
Q ss_pred CCCCCcCCCCccEEEecCcchhhHH---HHHHHhccCCeEEEEe
Q psy7834 276 GREGHAAEGPYDVIYVGGAVHHYPF---KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 276 ~~~~~~~~~~fD~i~s~~~~~~~~~---~~~~~L~pgG~l~~~~ 316 (492)
+... ..++||+|+++..++++.. ++.++|+|||++++..
T Consensus 118 ~~~~--~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 159 (205)
T 3grz_A 118 LLAD--VDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSG 159 (205)
T ss_dssp TTTT--CCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEE
T ss_pred cccc--CCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 8653 3478999999998887654 7789999999999964
No 84
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.52 E-value=6.3e-14 Score=128.87 Aligned_cols=111 Identities=19% Similarity=0.209 Sum_probs=90.7
Q ss_pred HHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC
Q psy7834 200 QALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG 279 (492)
Q Consensus 200 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 279 (492)
.+.+.+...+.++.+|||+|||+|.++..+++.. +. +|+|+|+|+.+++.|+++... ..+++++++|+.+.
T Consensus 31 ~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~-~~-~v~~~D~s~~~~~~a~~~~~~-------~~~i~~~~~d~~~~ 101 (215)
T 2pxx_A 31 SFRALLEPELRPEDRILVLGCGNSALSYELFLGG-FP-NVTSVDYSSVVVAAMQACYAH-------VPQLRWETMDVRKL 101 (215)
T ss_dssp HHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTT-CC-CEEEEESCHHHHHHHHHHTTT-------CTTCEEEECCTTSC
T ss_pred HHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcC-CC-cEEEEeCCHHHHHHHHHhccc-------CCCcEEEEcchhcC
Confidence 3556666667888999999999999999999874 32 799999999999999998753 24789999999876
Q ss_pred CcCCCCccEEEecCcchhhH---------------------HHHHHHhccCCeEEEEeCCC
Q psy7834 280 HAAEGPYDVIYVGGAVHHYP---------------------FKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 280 ~~~~~~fD~i~s~~~~~~~~---------------------~~~~~~L~pgG~l~~~~~~~ 319 (492)
+.++++||+|+++.+++++. .++.++|||||++++.....
T Consensus 102 ~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 102 DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 66678899999988775442 37889999999999977544
No 85
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.52 E-value=5.1e-14 Score=133.03 Aligned_cols=112 Identities=21% Similarity=0.309 Sum_probs=88.8
Q ss_pred HHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCC
Q psy7834 199 AQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGRE 278 (492)
Q Consensus 199 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 278 (492)
..++..+.. +.++.+|||||||+|..+..+++..++.++|+++|+|+.+++.|++++...+ ...+++++++|+.+
T Consensus 52 ~~~l~~l~~-~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g----~~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 52 GQFLALLVR-LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG----VDQRVTLREGPALQ 126 (248)
T ss_dssp HHHHHHHHH-HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT----CTTTEEEEESCHHH
T ss_pred HHHHHHHHh-hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEEcCHHH
Confidence 344444432 4567899999999999999999987557899999999999999999998864 23479999999865
Q ss_pred CCc---CCCCccEEEecCcchhhH---HHHHHHhccCCeEEEE
Q psy7834 279 GHA---AEGPYDVIYVGGAVHHYP---FKLMDQLKPGGVMWFT 315 (492)
Q Consensus 279 ~~~---~~~~fD~i~s~~~~~~~~---~~~~~~L~pgG~l~~~ 315 (492)
... ..++||+|++.......+ +++.++|||||++++.
T Consensus 127 ~l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 127 SLESLGECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp HHHTCCSCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred HHHhcCCCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence 221 235899999987765544 4889999999999985
No 86
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.52 E-value=5.3e-14 Score=127.84 Aligned_cols=106 Identities=20% Similarity=0.159 Sum_probs=87.1
Q ss_pred HHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC
Q psy7834 200 QALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG 279 (492)
Q Consensus 200 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 279 (492)
.+++.+. ..++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|++++...+ ..+++++.+|+.+.
T Consensus 23 ~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~d~~~~ 92 (199)
T 2xvm_A 23 EVLEAVK--VVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIEN-----LDNLHTRVVDLNNL 92 (199)
T ss_dssp HHHHHTT--TSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHT-----CTTEEEEECCGGGC
T ss_pred HHHHHhh--ccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCC-----CCCcEEEEcchhhC
Confidence 3444443 346789999999999999999987 3489999999999999999987753 34799999999776
Q ss_pred CcCCCCccEEEecCcchhhH--------HHHHHHhccCCeEEEEe
Q psy7834 280 HAAEGPYDVIYVGGAVHHYP--------FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 280 ~~~~~~fD~i~s~~~~~~~~--------~~~~~~L~pgG~l~~~~ 316 (492)
+. +++||+|++..++++++ .++.++|||||++++..
T Consensus 93 ~~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 93 TF-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp CC-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CC-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 55 77899999999988775 27889999999988754
No 87
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.52 E-value=3.5e-14 Score=134.39 Aligned_cols=100 Identities=16% Similarity=0.260 Sum_probs=85.9
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
..++.+|||+|||+|.++..+++.. ..+|+++|+|+.|++.|++++... .+++++++|+...+.++++||+
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~~~~~~~~fD~ 161 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM-------PVGKFILASMETATLPPNTYDL 161 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS-------SEEEEEESCGGGCCCCSSCEEE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC-------CceEEEEccHHHCCCCCCCeEE
Confidence 3467899999999999999999886 457999999999999999987542 4799999999876666789999
Q ss_pred EEecCcchhhH--------HHHHHHhccCCeEEEEeC
Q psy7834 289 IYVGGAVHHYP--------FKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 289 i~s~~~~~~~~--------~~~~~~L~pgG~l~~~~~ 317 (492)
|++..++++++ .++.++|||||++++..+
T Consensus 162 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 162 IVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 99999999883 278899999999999763
No 88
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.51 E-value=3.5e-14 Score=130.58 Aligned_cols=99 Identities=25% Similarity=0.379 Sum_probs=83.8
Q ss_pred HhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCC
Q psy7834 206 KDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGP 285 (492)
Q Consensus 206 ~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 285 (492)
...++++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|+++. ++.++.+|+...+ .+++
T Consensus 38 ~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~d~~~~~-~~~~ 102 (211)
T 3e23_A 38 LGELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL-----------GRPVRTMLFHQLD-AIDA 102 (211)
T ss_dssp HTTSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH-----------TSCCEECCGGGCC-CCSC
T ss_pred HHhcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc-----------CCceEEeeeccCC-CCCc
Confidence 334678899999999999999999987 347999999999999999886 2467888887665 6789
Q ss_pred ccEEEecCcchhhH--------HHHHHHhccCCeEEEEeCCC
Q psy7834 286 YDVIYVGGAVHHYP--------FKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 286 fD~i~s~~~~~~~~--------~~~~~~L~pgG~l~~~~~~~ 319 (492)
||+|+++.++++++ .++.++|||||++++.+...
T Consensus 103 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 144 (211)
T 3e23_A 103 YDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSG 144 (211)
T ss_dssp EEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 99999999998886 27889999999999986544
No 89
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.51 E-value=1.6e-14 Score=134.82 Aligned_cols=125 Identities=34% Similarity=0.476 Sum_probs=104.5
Q ss_pred CcccCCCCCCC----CCccc--cccccccCCcccCCccccccchhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHH
Q psy7834 1 MLAVDRGHYTT----WRPYA--NCITNIGYGAHMQAPFQDNTKFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALL 74 (492)
Q Consensus 1 ~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l 74 (492)
|+.|||..|+| ..+|. +..+++..++.+..|.. .+.+++.+ .+.++.+|||+|||+|.++..+
T Consensus 20 ~~~v~r~~f~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~--~~~~~~~vLdiG~G~G~~~~~l 88 (231)
T 1vbf_A 20 FNKVDRSLFLPENLKDYAYAHTHEALPILPGINTTALNL---------GIFMLDEL--DLHKGQKVLEIGTGIGYYTALI 88 (231)
T ss_dssp HHHSCHHHHSCGGGGGGSSSSTTCCEEEETTEEECCHHH---------HHHHHHHT--TCCTTCEEEEECCTTSHHHHHH
T ss_pred HHhCCHHHcCCcchhhhccccCCCceeeCCCCccCCHHH---------HHHHHHhc--CCCCCCEEEEEcCCCCHHHHHH
Confidence 35689988888 56788 88888888877777666 67778877 7788899999999999999999
Q ss_pred HHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccceeccCcccccccc
Q psy7834 75 AWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDIIHVGGSIEDIPEG 146 (492)
Q Consensus 75 a~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~l~~~ 146 (492)
++.. .+|+++|+++.+++.|+++.... .+++++++|+.+.....++||+|++...++++.+.
T Consensus 89 ~~~~---~~v~~vD~~~~~~~~a~~~~~~~-------~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~ 150 (231)
T 1vbf_A 89 AEIV---DKVVSVEINEKMYNYASKLLSYY-------NNIKLILGDGTLGYEEEKPYDRVVVWATAPTLLCK 150 (231)
T ss_dssp HHHS---SEEEEEESCHHHHHHHHHHHTTC-------SSEEEEESCGGGCCGGGCCEEEEEESSBBSSCCHH
T ss_pred HHHc---CEEEEEeCCHHHHHHHHHHHhhc-------CCeEEEECCcccccccCCCccEEEECCcHHHHHHH
Confidence 9986 79999999999999999988653 27999999998744446789999999888876554
No 90
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.51 E-value=3.1e-14 Score=136.92 Aligned_cols=103 Identities=24% Similarity=0.479 Sum_probs=86.1
Q ss_pred HHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC
Q psy7834 200 QALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG 279 (492)
Q Consensus 200 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 279 (492)
.+++.+. +.++.+|||||||+|.++..+++ +.++|+|+|+|+.|++.|+++. ++++++++|+...
T Consensus 48 ~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~ 112 (279)
T 3ccf_A 48 DLLQLLN--PQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY----------PHLHFDVADARNF 112 (279)
T ss_dssp HHHHHHC--CCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC----------TTSCEEECCTTTC
T ss_pred HHHHHhC--CCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC----------CCCEEEECChhhC
Confidence 4455554 56788999999999999999998 3568999999999999998774 2578999999875
Q ss_pred CcCCCCccEEEecCcchhhH------HHHHHHhccCCeEEEEeCC
Q psy7834 280 HAAEGPYDVIYVGGAVHHYP------FKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 280 ~~~~~~fD~i~s~~~~~~~~------~~~~~~L~pgG~l~~~~~~ 318 (492)
+. +++||+|++..++++++ .++.++|||||++++.++.
T Consensus 113 ~~-~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 113 RV-DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp CC-SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred Cc-CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecC
Confidence 54 57899999999998875 3889999999999997643
No 91
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.51 E-value=5.1e-14 Score=130.67 Aligned_cols=112 Identities=21% Similarity=0.340 Sum_probs=88.2
Q ss_pred HHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCC
Q psy7834 199 AQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGRE 278 (492)
Q Consensus 199 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 278 (492)
..++..+.. ..++.+|||||||+|..+..+++..++.++|+++|+++.+++.|++++...+ ...+++++++|+.+
T Consensus 47 ~~~l~~l~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~ 121 (223)
T 3duw_A 47 GKFLQLLVQ-IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN----LNDRVEVRTGLALD 121 (223)
T ss_dssp HHHHHHHHH-HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEESCHHH
T ss_pred HHHHHHHHH-hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEEcCHHH
Confidence 344444432 4567899999999999999999987547899999999999999999998764 23469999999864
Q ss_pred CCcC-----CCCccEEEecCcchhhH---HHHHHHhccCCeEEEE
Q psy7834 279 GHAA-----EGPYDVIYVGGAVHHYP---FKLMDQLKPGGVMWFT 315 (492)
Q Consensus 279 ~~~~-----~~~fD~i~s~~~~~~~~---~~~~~~L~pgG~l~~~ 315 (492)
.... .++||+|++.....+.+ +++.++|+|||++++.
T Consensus 122 ~~~~~~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 122 SLQQIENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp HHHHHHHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred HHHHHHhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEe
Confidence 3221 16799999988765554 4788999999998884
No 92
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.51 E-value=8.5e-15 Score=137.78 Aligned_cols=103 Identities=18% Similarity=0.308 Sum_probs=86.0
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcC------
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAA------ 282 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 282 (492)
..++.+|||||||+|+.+..+++..++.++|+++|+|+.|++.|+++++..+ ...+++++++|+.+....
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g----~~~~i~~~~gda~~~l~~~~~~~~ 133 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK----QEHKIKLRLGPALDTLHSLLNEGG 133 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT----CTTTEEEEESCHHHHHHHHHHHHC
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEEcCHHHHHHHHhhccC
Confidence 4467899999999999999999987667899999999999999999998864 235899999998654322
Q ss_pred CCCccEEEecCcchhhH---HHHHHHhccCCeEEEE
Q psy7834 283 EGPYDVIYVGGAVHHYP---FKLMDQLKPGGVMWFT 315 (492)
Q Consensus 283 ~~~fD~i~s~~~~~~~~---~~~~~~L~pgG~l~~~ 315 (492)
.++||+|++........ +++.++|||||++++.
T Consensus 134 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 134 EHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp SSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEE
Confidence 47899999987765444 4889999999999985
No 93
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.51 E-value=5.3e-14 Score=134.90 Aligned_cols=112 Identities=21% Similarity=0.266 Sum_probs=87.5
Q ss_pred HHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHH------HHHHHHHHHHhhCCCCCCCCcEEEEE
Q psy7834 200 QALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIED------LVAQANKSMHTYYPNLMEGGRVQFVD 273 (492)
Q Consensus 200 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~------~l~~a~~~~~~~~~~~~~~~~v~~~~ 273 (492)
.+++.+. +.++.+|||||||+|.++..+++..++.++|+|+|+|+. |++.|++++...+ ..+++++++
T Consensus 34 ~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~----~~~~v~~~~ 107 (275)
T 3bkx_A 34 AIAEAWQ--VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP----LGDRLTVHF 107 (275)
T ss_dssp HHHHHHT--CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST----TGGGEEEEC
T ss_pred HHHHHcC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC----CCCceEEEE
Confidence 3444443 678899999999999999999998767789999999997 9999999987643 124799999
Q ss_pred cc-C--CCCCcCCCCccEEEecCcchhhHH-----H-HHHHhccCCeEEEEeC
Q psy7834 274 GD-G--REGHAAEGPYDVIYVGGAVHHYPF-----K-LMDQLKPGGVMWFTIG 317 (492)
Q Consensus 274 ~d-~--~~~~~~~~~fD~i~s~~~~~~~~~-----~-~~~~L~pgG~l~~~~~ 317 (492)
+| . ...+.++++||+|++..+++++++ + +.++++|||++++...
T Consensus 108 ~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 108 NTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp SCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred CChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 98 3 333445688999999999988863 3 3445566999999653
No 94
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.50 E-value=3.7e-14 Score=135.09 Aligned_cols=105 Identities=19% Similarity=0.257 Sum_probs=87.4
Q ss_pred HHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCC
Q psy7834 198 HAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGR 277 (492)
Q Consensus 198 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 277 (492)
...+.+.+...++++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++.. +++++++|+.
T Consensus 37 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~----------~~~~~~~d~~ 103 (263)
T 3pfg_A 37 AADLAALVRRHSPKAASLLDVACGTGMHLRHLADSF---GTVEGLELSADMLAIARRRNP----------DAVLHHGDMR 103 (263)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTS---SEEEEEESCHHHHHHHHHHCT----------TSEEEECCTT
T ss_pred HHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCC----------CCEEEECChH
Confidence 345566666556778899999999999999998874 379999999999999998743 5899999998
Q ss_pred CCCcCCCCccEEEecC-cchhhH---------HHHHHHhccCCeEEEEe
Q psy7834 278 EGHAAEGPYDVIYVGG-AVHHYP---------FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 278 ~~~~~~~~fD~i~s~~-~~~~~~---------~~~~~~L~pgG~l~~~~ 316 (492)
+.+. +++||+|++.. ++++++ .++.++|||||++++..
T Consensus 104 ~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 104 DFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp TCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred HCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 7554 68999999998 888874 27889999999999964
No 95
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.50 E-value=1.6e-13 Score=132.10 Aligned_cols=133 Identities=19% Similarity=0.257 Sum_probs=97.9
Q ss_pred CCCCCCcccCCCCcccChHH---HHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Q psy7834 178 PYWDIPQSLGFGSVMSSPKV---HAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANK 254 (492)
Q Consensus 178 ~y~d~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~ 254 (492)
.|+...+..+.+..+++|.. .+.+++.+. ..++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++
T Consensus 89 ~f~~~~~~v~~~~lipr~~te~lv~~~l~~~~--~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~ 164 (284)
T 1nv8_A 89 EFMGLSFLVEEGVFVPRPETEELVELALELIR--KYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARK 164 (284)
T ss_dssp EETTEEEECCTTSCCCCTTHHHHHHHHHHHHH--HHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHH
T ss_pred EECCeEEEeCCCceecChhHHHHHHHHHHHhc--ccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHH
Confidence 34555555555666666643 333444432 236679999999999999999988 67799999999999999999
Q ss_pred HHHhhCCCCCCCCcEEEEEccCCCCCcCCCCc---cEEEecCcch-------------------------hhHHHHH-HH
Q psy7834 255 SMHTYYPNLMEGGRVQFVDGDGREGHAAEGPY---DVIYVGGAVH-------------------------HYPFKLM-DQ 305 (492)
Q Consensus 255 ~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f---D~i~s~~~~~-------------------------~~~~~~~-~~ 305 (492)
|+..++ ...+++|+++|+.+.. . ++| |+|+++.... .+..++. +.
T Consensus 165 n~~~~~----l~~~v~~~~~D~~~~~-~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~ 238 (284)
T 1nv8_A 165 NAERHG----VSDRFFVRKGEFLEPF-K-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRY 238 (284)
T ss_dssp HHHHTT----CTTSEEEEESSTTGGG-G-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHC
T ss_pred HHHHcC----CCCceEEEECcchhhc-c-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhc
Confidence 998864 1235999999987632 2 478 9999983221 2234788 99
Q ss_pred hccCCeEEEEeCCCc
Q psy7834 306 LKPGGVMWFTIGNAE 320 (492)
Q Consensus 306 L~pgG~l~~~~~~~~ 320 (492)
|+|||++++.++..+
T Consensus 239 l~pgG~l~~e~~~~q 253 (284)
T 1nv8_A 239 DTSGKIVLMEIGEDQ 253 (284)
T ss_dssp CCTTCEEEEECCTTC
T ss_pred CCCCCEEEEEECchH
Confidence 999999999877644
No 96
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.50 E-value=6.8e-14 Score=131.98 Aligned_cols=111 Identities=23% Similarity=0.361 Sum_probs=87.9
Q ss_pred HHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC
Q psy7834 200 QALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG 279 (492)
Q Consensus 200 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 279 (492)
.++..+.. ..++.+|||||||+|+.+..+++..++.++|+++|+|+.+++.|++++...+ ...+++++.+|+.+.
T Consensus 69 ~ll~~l~~-~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g----~~~~i~~~~gda~~~ 143 (247)
T 1sui_A 69 QFLSMLLK-LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG----VDHKIDFREGPALPV 143 (247)
T ss_dssp HHHHHHHH-HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT----CGGGEEEEESCHHHH
T ss_pred HHHHHHHH-hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCCeEEEECCHHHH
Confidence 34444432 4567899999999999999999987557899999999999999999998764 235799999998653
Q ss_pred Cc-------CCCCccEEEecCcchhhH---HHHHHHhccCCeEEEE
Q psy7834 280 HA-------AEGPYDVIYVGGAVHHYP---FKLMDQLKPGGVMWFT 315 (492)
Q Consensus 280 ~~-------~~~~fD~i~s~~~~~~~~---~~~~~~L~pgG~l~~~ 315 (492)
.. ..++||+|++.......+ +++.++|||||++++.
T Consensus 144 l~~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 144 LDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp HHHHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred HHHHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEe
Confidence 21 147899999987654433 4889999999999985
No 97
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.50 E-value=3.1e-14 Score=135.59 Aligned_cols=108 Identities=21% Similarity=0.303 Sum_probs=88.4
Q ss_pred ChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEE
Q psy7834 194 SPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVD 273 (492)
Q Consensus 194 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~ 273 (492)
.+.+...+++.+. +.++.+|||+|||+|.++..+++ +..+|+|+|+|+.|++.|+++. ++++++
T Consensus 19 ~~~~~~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-----------~~~~~~ 82 (261)
T 3ege_A 19 DIRIVNAIINLLN--LPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP-----------QVEWFT 82 (261)
T ss_dssp CHHHHHHHHHHHC--CCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT-----------TEEEEC
T ss_pred cHHHHHHHHHHhC--CCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc-----------CCEEEE
Confidence 3455566666664 56789999999999999999987 4568999999999998876432 689999
Q ss_pred ccCCCCCcCCCCccEEEecCcchhhHH------HHHHHhccCCeEEEEeCC
Q psy7834 274 GDGREGHAAEGPYDVIYVGGAVHHYPF------KLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 274 ~d~~~~~~~~~~fD~i~s~~~~~~~~~------~~~~~L~pgG~l~~~~~~ 318 (492)
+|+.+.+.++++||+|++..+++|+++ ++.++|| ||++++....
T Consensus 83 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 83 GYAENLALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp CCTTSCCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred CchhhCCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 999887767789999999999988753 8899999 9988876543
No 98
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.50 E-value=3.9e-14 Score=133.77 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=86.1
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcC---CCCc
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAA---EGPY 286 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~f 286 (492)
.++.+|||||||+|..+..++... +..+|+++|+|+.|++.|++++...+ ..+++++++|+.+.... .++|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~-----l~~v~~~~~d~~~~~~~~~~~~~f 152 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLG-----LKGARALWGRAEVLAREAGHREAY 152 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHT-----CSSEEEEECCHHHHTTSTTTTTCE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhC-----CCceEEEECcHHHhhcccccCCCc
Confidence 467899999999999999999886 67899999999999999999998864 35799999998765432 4789
Q ss_pred cEEEecCcc--hhhHHHHHHHhccCCeEEEEeCC
Q psy7834 287 DVIYVGGAV--HHYPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 287 D~i~s~~~~--~~~~~~~~~~L~pgG~l~~~~~~ 318 (492)
|+|+|.... ..+.+.+.++|||||++++..+.
T Consensus 153 D~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~g~ 186 (249)
T 3g89_A 153 ARAVARAVAPLCVLSELLLPFLEVGGAAVAMKGP 186 (249)
T ss_dssp EEEEEESSCCHHHHHHHHGGGEEEEEEEEEEECS
T ss_pred eEEEECCcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 999998653 34556888999999999986654
No 99
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.50 E-value=3.2e-14 Score=133.37 Aligned_cols=99 Identities=17% Similarity=0.240 Sum_probs=79.7
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC--CcCCCCc
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG--HAAEGPY 286 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~f 286 (492)
..++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.|+++....+ .+++++++|+.+. +.++++|
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~f 129 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQT------HKVIPLKGLWEDVAPTLPDGHF 129 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCS------SEEEEEESCHHHHGGGSCTTCE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcC------CCeEEEecCHHHhhcccCCCce
Confidence 4678899999999999999997643 3489999999999999999887642 5799999998765 5567899
Q ss_pred cEEEe-cCcc--hh--------hHHHHHHHhccCCeEEEE
Q psy7834 287 DVIYV-GGAV--HH--------YPFKLMDQLKPGGVMWFT 315 (492)
Q Consensus 287 D~i~s-~~~~--~~--------~~~~~~~~L~pgG~l~~~ 315 (492)
|+|++ ...+ +. +..++.++|||||+|++.
T Consensus 130 D~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred EEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 99999 3332 11 135789999999999874
No 100
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.50 E-value=2.8e-14 Score=134.20 Aligned_cols=100 Identities=20% Similarity=0.240 Sum_probs=84.7
Q ss_pred CCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEEE
Q psy7834 211 PGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIY 290 (492)
Q Consensus 211 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 290 (492)
++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|++++...+ ..+++++.+|+......+++||+|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v~ 151 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEG-----KRVRNYFCCGLQDFTPEPDSYDVIW 151 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGG-----GGEEEEEECCGGGCCCCSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcC-----CceEEEEEcChhhcCCCCCCEEEEE
Confidence 57899999999999999998775 4589999999999999999987631 2468999999877666667899999
Q ss_pred ecCcchhhHH--------HHHHHhccCCeEEEEeC
Q psy7834 291 VGGAVHHYPF--------KLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 291 s~~~~~~~~~--------~~~~~L~pgG~l~~~~~ 317 (492)
+..+++++++ ++.++|||||++++...
T Consensus 152 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 152 IQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 9999887753 67899999999999653
No 101
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.50 E-value=5.8e-14 Score=131.38 Aligned_cols=109 Identities=12% Similarity=0.123 Sum_probs=83.6
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCC-CCCCCCcEEEEEccCCC-CC--cCCC
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYP-NLMEGGRVQFVDGDGRE-GH--AAEG 284 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~-~~~~~~~v~~~~~d~~~-~~--~~~~ 284 (492)
..++.+|||||||+|.++..+|+.. +...|+|+|+|+.|++.|++++..... ......|++++++|+.. ++ .+++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCc
Confidence 4567799999999999999999886 678999999999999999988753100 00124689999999976 32 4578
Q ss_pred CccEEEecCcchh--------------hHHHHHHHhccCCeEEEEeCC
Q psy7834 285 PYDVIYVGGAVHH--------------YPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 285 ~fD~i~s~~~~~~--------------~~~~~~~~L~pgG~l~~~~~~ 318 (492)
+||.|+++...+| +..++.++|||||+|++.+..
T Consensus 123 ~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 123 QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 9999998765443 446889999999999997643
No 102
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.50 E-value=8.6e-14 Score=133.68 Aligned_cols=133 Identities=19% Similarity=0.338 Sum_probs=97.0
Q ss_pred CCCCCcccCCCCcccChHHHHHHHHHHHhcc-CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHH
Q psy7834 179 YWDIPQSLGFGSVMSSPKVHAQALEILKDYL-KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMH 257 (492)
Q Consensus 179 y~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~ 257 (492)
|++..+....+..+++|... .+.+.+...+ .++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.|++|+.
T Consensus 77 f~~~~~~~~~~~~ipr~~te-~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~ 154 (276)
T 2b3t_A 77 FWSLPLFVSPATLIPRPDTE-CLVEQALARLPEQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQ 154 (276)
T ss_dssp ETTEEEECCTTSCCCCTTHH-HHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHH
T ss_pred ECCceEEeCCCCcccCchHH-HHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHH
Confidence 34444444445555666533 3333333333 567899999999999999999876 67899999999999999999998
Q ss_pred hhCCCCCCCCcEEEEEccCCCCCcCCCCccEEEecCcch-------------------------------hhHHHHHHHh
Q psy7834 258 TYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIYVGGAVH-------------------------------HYPFKLMDQL 306 (492)
Q Consensus 258 ~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~s~~~~~-------------------------------~~~~~~~~~L 306 (492)
.++ ..+++++++|+.+. .+.++||+|+++..+. .+..++.+.|
T Consensus 155 ~~~-----~~~v~~~~~d~~~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~L 228 (276)
T 2b3t_A 155 HLA-----IKNIHILQSDWFSA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNAL 228 (276)
T ss_dssp HHT-----CCSEEEECCSTTGG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGE
T ss_pred HcC-----CCceEEEEcchhhh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhc
Confidence 764 34799999998763 3357899999984321 1224678899
Q ss_pred ccCCeEEEEeCCC
Q psy7834 307 KPGGVMWFTIGNA 319 (492)
Q Consensus 307 ~pgG~l~~~~~~~ 319 (492)
+|||++++..+..
T Consensus 229 kpgG~l~~~~~~~ 241 (276)
T 2b3t_A 229 VSGGFLLLEHGWQ 241 (276)
T ss_dssp EEEEEEEEECCSS
T ss_pred CCCCEEEEEECch
Confidence 9999999976543
No 103
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.50 E-value=3.8e-14 Score=131.93 Aligned_cols=92 Identities=20% Similarity=0.285 Sum_probs=79.8
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCC-CCCcC-CCCc
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGR-EGHAA-EGPY 286 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~-~~~~~-~~~f 286 (492)
++++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|+++. ++++++++|+. ..+.. +++|
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~~~f 112 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARANA----------PHADVYEWNGKGELPAGLGAPF 112 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHC----------TTSEEEECCSCSSCCTTCCCCE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhC----------CCceEEEcchhhccCCcCCCCE
Confidence 578899999999999999999987 348999999999999999872 36899999994 44445 6899
Q ss_pred cEEEecCcchhhHHHHHHHhccCCeEE
Q psy7834 287 DVIYVGGAVHHYPFKLMDQLKPGGVMW 313 (492)
Q Consensus 287 D~i~s~~~~~~~~~~~~~~L~pgG~l~ 313 (492)
|+|+++.....+..++.++|||||+++
T Consensus 113 D~v~~~~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 113 GLIVSRRGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EEEEEESCCSGGGGGHHHHEEEEEEEE
T ss_pred EEEEeCCCHHHHHHHHHHHcCCCcEEE
Confidence 999999777777789999999999999
No 104
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.50 E-value=1.5e-14 Score=135.68 Aligned_cols=99 Identities=18% Similarity=0.253 Sum_probs=79.0
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC--CcCCCCc
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG--HAAEGPY 286 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~f 286 (492)
..+|.+|||||||+|..+..+++.. ..+|++||+|+.|++.|+++.... ..++.++.+|+... ..++++|
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~------~~~~~~~~~~a~~~~~~~~~~~F 129 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQ------THKVIPLKGLWEDVAPTLPDGHF 129 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGC------SSEEEEEESCHHHHGGGSCTTCE
T ss_pred ccCCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhC------CCceEEEeehHHhhcccccccCC
Confidence 4678999999999999999998764 247999999999999999998764 24788999987543 3456789
Q ss_pred cEEEecCc-----chhhH------HHHHHHhccCCeEEEE
Q psy7834 287 DVIYVGGA-----VHHYP------FKLMDQLKPGGVMWFT 315 (492)
Q Consensus 287 D~i~s~~~-----~~~~~------~~~~~~L~pgG~l~~~ 315 (492)
|.|++... .++++ +++.|+|||||+|++.
T Consensus 130 D~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 99986532 33443 3789999999999873
No 105
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.50 E-value=4e-14 Score=132.62 Aligned_cols=115 Identities=16% Similarity=0.153 Sum_probs=87.1
Q ss_pred CCcccC-hHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHH---hCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCC
Q psy7834 189 GSVMSS-PKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHM---VGPTGKVYAVEHIEDLVAQANKSMHTYYPNLM 264 (492)
Q Consensus 189 ~~~~~~-~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~---~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~ 264 (492)
+..+++ |.....+.+.+. ..++.+|||||||+|+.+..+++. .++.++|+|+|+|+.|++.|+. .
T Consensus 60 ~~~~~~~p~~~~~l~~~l~--~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~---~------ 128 (236)
T 2bm8_A 60 GLRMLKDPDTQAVYHDMLW--ELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS---D------ 128 (236)
T ss_dssp TEECCSCHHHHHHHHHHHH--HHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG---G------
T ss_pred cccccCCHHHHHHHHHHHH--hcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc---c------
Confidence 445556 776666666665 235679999999999999999997 4577899999999999998871 1
Q ss_pred CCCcEEEEEccCCCC---Cc-CCCCccEEEecCcchhhH---HHHHH-HhccCCeEEEE
Q psy7834 265 EGGRVQFVDGDGREG---HA-AEGPYDVIYVGGAVHHYP---FKLMD-QLKPGGVMWFT 315 (492)
Q Consensus 265 ~~~~v~~~~~d~~~~---~~-~~~~fD~i~s~~~~~~~~---~~~~~-~L~pgG~l~~~ 315 (492)
..+++++++|+.+. .. ...+||+|++.......+ .++.+ +|||||+|++.
T Consensus 129 -~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 129 -MENITLHQGDCSDLTTFEHLREMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp -CTTEEEEECCSSCSGGGGGGSSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEEC
T ss_pred -CCceEEEECcchhHHHHHhhccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEE
Confidence 24799999999764 22 234799999877633333 36776 99999999995
No 106
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.49 E-value=1.1e-13 Score=129.90 Aligned_cols=108 Identities=23% Similarity=0.305 Sum_probs=87.4
Q ss_pred HHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC
Q psy7834 201 ALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH 280 (492)
Q Consensus 201 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 280 (492)
..+.+...++++.+|||+|||+|.++..+++. .+|+|+|+|+.|++.|+++....+ .+++++++|+.+.+
T Consensus 23 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~ 92 (243)
T 3d2l_A 23 WVAWVLEQVEPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN------RHVDFWVQDMRELE 92 (243)
T ss_dssp HHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT------CCCEEEECCGGGCC
T ss_pred HHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC------CceEEEEcChhhcC
Confidence 34444445677899999999999999998875 579999999999999999987642 46899999987654
Q ss_pred cCCCCccEEEecC-cchhh---H------HHHHHHhccCCeEEEEeCCC
Q psy7834 281 AAEGPYDVIYVGG-AVHHY---P------FKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 281 ~~~~~fD~i~s~~-~~~~~---~------~~~~~~L~pgG~l~~~~~~~ 319 (492)
.+ ++||+|++.. +++++ . .++.++|||||++++.++..
T Consensus 93 ~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 140 (243)
T 3d2l_A 93 LP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSP 140 (243)
T ss_dssp CS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCH
Confidence 44 7899999986 77776 2 27889999999999977543
No 107
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.49 E-value=9.3e-14 Score=137.23 Aligned_cols=115 Identities=20% Similarity=0.191 Sum_probs=88.7
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHH-------hhCCCCCCCC
Q psy7834 195 PKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMH-------TYYPNLMEGG 267 (492)
Q Consensus 195 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~-------~~~~~~~~~~ 267 (492)
+.....+++.+. +.++.+|||||||+|.++..+|... +..+|+|||+|+.|++.|+++.. .++. ...
T Consensus 159 ~~~i~~il~~l~--l~~gd~VLDLGCGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl---~~~ 232 (438)
T 3uwp_A 159 FDLVAQMIDEIK--MTDDDLFVDLGSGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGK---KHA 232 (438)
T ss_dssp HHHHHHHHHHHC--CCTTCEEEEESCTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTB---CCC
T ss_pred HHHHHHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCC---CCC
Confidence 455666777765 7889999999999999999999876 44579999999999999988642 2221 125
Q ss_pred cEEEEEccCCCCCcCC--CCccEEEecCcchhh-----HHHHHHHhccCCeEEEE
Q psy7834 268 RVQFVDGDGREGHAAE--GPYDVIYVGGAVHHY-----PFKLMDQLKPGGVMWFT 315 (492)
Q Consensus 268 ~v~~~~~d~~~~~~~~--~~fD~i~s~~~~~~~-----~~~~~~~L~pgG~l~~~ 315 (492)
+++|+++|+.+.+..+ ..||+|+++..+.+- ..++++.|||||+|++.
T Consensus 233 rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 233 EYTLERGDFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp EEEEEECCTTSHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEES
T ss_pred CeEEEECcccCCccccccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEe
Confidence 8999999998755432 479999998765321 13788999999999985
No 108
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.49 E-value=1.2e-13 Score=135.44 Aligned_cols=100 Identities=20% Similarity=0.208 Sum_probs=85.0
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||+|||+|.++..+++..+ .+|+|+|+|+.|++.|++++...+ ...+++++++|+.+.+ ++||+
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~---~~fD~ 158 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFD--VNVIGLTLSKNQHARCEQVLASID----TNRSRQVLLQGWEDFA---EPVDR 158 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTSC----CSSCEEEEESCGGGCC---CCCSE
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcC----CCCceEEEECChHHCC---CCcCE
Confidence 46788999999999999999998863 489999999999999999987753 2246999999986642 68999
Q ss_pred EEecCcchhhH--------HHHHHHhccCCeEEEEeC
Q psy7834 289 IYVGGAVHHYP--------FKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 289 i~s~~~~~~~~--------~~~~~~L~pgG~l~~~~~ 317 (492)
|++..++++++ .++.++|||||++++...
T Consensus 159 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 159 IVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp EEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 99999998883 278899999999999754
No 109
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.49 E-value=6e-14 Score=128.97 Aligned_cols=103 Identities=23% Similarity=0.389 Sum_probs=84.6
Q ss_pred HHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc
Q psy7834 202 LEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA 281 (492)
Q Consensus 202 ~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 281 (492)
.+.+...+.++.+|||+|||+|.++..+ ...+|+|+|+|+.|++.|+++. .+++++++|+.+.+.
T Consensus 27 ~~~l~~~~~~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~ 91 (211)
T 2gs9_A 27 ERALKGLLPPGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA----------PEATWVRAWGEALPF 91 (211)
T ss_dssp HHHHHTTCCCCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC----------TTSEEECCCTTSCCS
T ss_pred HHHHHHhcCCCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC----------CCcEEEEcccccCCC
Confidence 3444444557889999999999998877 1237999999999999999875 257899999987766
Q ss_pred CCCCccEEEecCcchhhH------HHHHHHhccCCeEEEEeCCC
Q psy7834 282 AEGPYDVIYVGGAVHHYP------FKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 282 ~~~~fD~i~s~~~~~~~~------~~~~~~L~pgG~l~~~~~~~ 319 (492)
++++||+|++..+++|++ .++.++|||||++++.+...
T Consensus 92 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 92 PGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp CSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 678999999999998875 37899999999999987543
No 110
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.49 E-value=3.6e-14 Score=129.61 Aligned_cols=95 Identities=20% Similarity=0.262 Sum_probs=82.3
Q ss_pred CCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEEEe
Q psy7834 212 GAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIYV 291 (492)
Q Consensus 212 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~s 291 (492)
+.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++. .+++++++|+.+.+.++++||+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~fD~v~~ 108 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG---HQIEGLEPATRLVELARQTH----------PSVTFHHGTITDLSDSPKRWAGLLA 108 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT---CCEEEECCCHHHHHHHHHHC----------TTSEEECCCGGGGGGSCCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhC----------CCCeEEeCcccccccCCCCeEEEEe
Confidence 7899999999999999999873 37999999999999999873 2589999999876666789999999
Q ss_pred cCcchhhH--------HHHHHHhccCCeEEEEeCCC
Q psy7834 292 GGAVHHYP--------FKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 292 ~~~~~~~~--------~~~~~~L~pgG~l~~~~~~~ 319 (492)
..++++++ .++.++|||||++++.+...
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 109 WYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp ESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred hhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 99998875 27889999999999986543
No 111
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.49 E-value=9.6e-14 Score=129.81 Aligned_cols=117 Identities=22% Similarity=0.361 Sum_probs=94.0
Q ss_pred ccChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEE
Q psy7834 192 MSSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQF 271 (492)
Q Consensus 192 ~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~ 271 (492)
+.+|.....+...+. ..++.+|||+|||+|..+..+++.. +.++|+++|+|+.+++.|++++...+ ...++++
T Consensus 37 ~~~~~~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~ 109 (233)
T 2gpy_A 37 IMDLLGMESLLHLLK--MAAPARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALG----LESRIEL 109 (233)
T ss_dssp CCCHHHHHHHHHHHH--HHCCSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTT----CTTTEEE
T ss_pred CcCHHHHHHHHHHHh--ccCCCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEE
Confidence 456666666666554 4578899999999999999999986 57799999999999999999998754 2246999
Q ss_pred EEccCCCCCc-C--CCCccEEEecCcchhhH---HHHHHHhccCCeEEEE
Q psy7834 272 VDGDGREGHA-A--EGPYDVIYVGGAVHHYP---FKLMDQLKPGGVMWFT 315 (492)
Q Consensus 272 ~~~d~~~~~~-~--~~~fD~i~s~~~~~~~~---~~~~~~L~pgG~l~~~ 315 (492)
+.+|+.+... . +++||+|+++...+... +++.++|+|||++++.
T Consensus 110 ~~~d~~~~~~~~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 110 LFGDALQLGEKLELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp ECSCGGGSHHHHTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EECCHHHHHHhcccCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 9999876422 2 47899999988775443 5888999999999996
No 112
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.49 E-value=4e-14 Score=129.31 Aligned_cols=118 Identities=19% Similarity=0.234 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEcc
Q psy7834 196 KVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGD 275 (492)
Q Consensus 196 ~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d 275 (492)
.+...+++.+... .++.+|||+|||+|.++..++.+. ..+|+|+|+|+.|++.|++++..++. ...+++++++|
T Consensus 39 ~~~~~l~~~l~~~-~~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~---~~~~v~~~~~d 112 (201)
T 2ift_A 39 RVKETLFNWLMPY-IHQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKC---SSEQAEVINQS 112 (201)
T ss_dssp HHHHHHHHHHHHH-HTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTC---CTTTEEEECSC
T ss_pred HHHHHHHHHHHHh-cCCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCC---CccceEEEECC
Confidence 3444555555421 257899999999999999877764 35899999999999999999987541 01579999999
Q ss_pred CCCCCc--CCCC-ccEEEecCcch--h---hHHHH--HHHhccCCeEEEEeCCC
Q psy7834 276 GREGHA--AEGP-YDVIYVGGAVH--H---YPFKL--MDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 276 ~~~~~~--~~~~-fD~i~s~~~~~--~---~~~~~--~~~L~pgG~l~~~~~~~ 319 (492)
+.+... .+++ ||+|+++..++ . +...+ .++|+|||++++.+.+.
T Consensus 113 ~~~~~~~~~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 113 SLDFLKQPQNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp HHHHTTSCCSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred HHHHHHhhccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 865432 2568 99999987743 1 22244 45699999999987554
No 113
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.49 E-value=6.7e-14 Score=131.46 Aligned_cols=119 Identities=21% Similarity=0.338 Sum_probs=93.7
Q ss_pred ccChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEE
Q psy7834 192 MSSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQF 271 (492)
Q Consensus 192 ~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~ 271 (492)
...|.....+...+. ..++.+|||+|||+|..+..+++..++.++|+++|+|+.+++.|++++...+ ...++++
T Consensus 43 ~~~~~~~~~l~~l~~--~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g----~~~~v~~ 116 (239)
T 2hnk_A 43 QISPEEGQFLNILTK--ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG----LENKIFL 116 (239)
T ss_dssp SCCHHHHHHHHHHHH--HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT----CGGGEEE
T ss_pred ccCHHHHHHHHHHHH--hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCCEEE
Confidence 456666555555554 4568899999999999999999987557899999999999999999998754 1235999
Q ss_pred EEccCCCCCc---------------C-C-CCccEEEecCcchhhH---HHHHHHhccCCeEEEEe
Q psy7834 272 VDGDGREGHA---------------A-E-GPYDVIYVGGAVHHYP---FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 272 ~~~d~~~~~~---------------~-~-~~fD~i~s~~~~~~~~---~~~~~~L~pgG~l~~~~ 316 (492)
+.+|+.+... + . ++||+|+++....+++ +++.++|+|||++++..
T Consensus 117 ~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 117 KLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp EESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 9999754211 1 2 6899999998777665 58899999999999853
No 114
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.49 E-value=4.9e-14 Score=132.47 Aligned_cols=104 Identities=13% Similarity=0.165 Sum_probs=84.5
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcC---CCCc
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAA---EGPY 286 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~f 286 (492)
.++.+|||+|||+|..+..++... +.++|+|+|+|+.|++.|++++...+ ..+++++++|+.+.... .++|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~f 142 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQ-----LENTTFCHDRAETFGQRKDVRESY 142 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHT-----CSSEEEEESCHHHHTTCTTTTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcC-----CCCEEEEeccHHHhcccccccCCc
Confidence 467899999999999999999864 67799999999999999999998764 34799999998664432 5789
Q ss_pred cEEEecCcc--hhhHHHHHHHhccCCeEEEEeCCC
Q psy7834 287 DVIYVGGAV--HHYPFKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 287 D~i~s~~~~--~~~~~~~~~~L~pgG~l~~~~~~~ 319 (492)
|+|++.... ..+..++.++|||||++++..+..
T Consensus 143 D~V~~~~~~~~~~~l~~~~~~LkpgG~l~~~~g~~ 177 (240)
T 1xdz_A 143 DIVTARAVARLSVLSELCLPLVKKNGLFVALKAAS 177 (240)
T ss_dssp EEEEEECCSCHHHHHHHHGGGEEEEEEEEEEECC-
T ss_pred cEEEEeccCCHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 999988742 233457889999999999976543
No 115
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.49 E-value=5.5e-14 Score=131.59 Aligned_cols=100 Identities=22% Similarity=0.224 Sum_probs=82.8
Q ss_pred CCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEEE
Q psy7834 211 PGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIY 290 (492)
Q Consensus 211 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 290 (492)
++.+|||+|||+|.++..+++ +..+|+|+|+|+.|++.|+++....+ ...+++++++|+.+.. +.++||+|+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~-~~~~fD~v~ 137 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSP----KAEYFSFVKEDVFTWR-PTELFDLIF 137 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSG----GGGGEEEECCCTTTCC-CSSCEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccC----CCcceEEEECchhcCC-CCCCeeEEE
Confidence 345999999999999999876 35589999999999999999986532 2347999999998754 456899999
Q ss_pred ecCcchhhH--------HHHHHHhccCCeEEEEeCC
Q psy7834 291 VGGAVHHYP--------FKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 291 s~~~~~~~~--------~~~~~~L~pgG~l~~~~~~ 318 (492)
+..++++++ .++.++|||||++++...+
T Consensus 138 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 138 DYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp EESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEec
Confidence 999988776 3788999999999986543
No 116
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.48 E-value=6.7e-14 Score=130.05 Aligned_cols=111 Identities=22% Similarity=0.283 Sum_probs=87.0
Q ss_pred HHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC
Q psy7834 200 QALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG 279 (492)
Q Consensus 200 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 279 (492)
.++..+.. ..++.+|||+|||+|..+..+++..++.++|+++|+|+.+++.|++++...+ ...+++++++|+.+.
T Consensus 54 ~~l~~l~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~ 128 (225)
T 3tr6_A 54 QLLALLVK-LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG----LSDKIGLRLSPAKDT 128 (225)
T ss_dssp HHHHHHHH-HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEESCHHHH
T ss_pred HHHHHHHH-hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC----CCCceEEEeCCHHHH
Confidence 33444432 4567899999999999999999987557899999999999999999998764 234699999998543
Q ss_pred CcC-C-----CCccEEEecCcchhhH---HHHHHHhccCCeEEEE
Q psy7834 280 HAA-E-----GPYDVIYVGGAVHHYP---FKLMDQLKPGGVMWFT 315 (492)
Q Consensus 280 ~~~-~-----~~fD~i~s~~~~~~~~---~~~~~~L~pgG~l~~~ 315 (492)
... . ++||+|++........ +++.++|||||++++.
T Consensus 129 ~~~~~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 129 LAELIHAGQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp HHHHHTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHhhhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 211 1 6899999887654443 5888999999999985
No 117
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.48 E-value=1.3e-13 Score=132.99 Aligned_cols=106 Identities=18% Similarity=0.189 Sum_probs=87.6
Q ss_pred HHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC
Q psy7834 200 QALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG 279 (492)
Q Consensus 200 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 279 (492)
.+++.+. ..++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|++++...+ . +++++++|+.+.
T Consensus 111 ~~~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~g---~~v~~vD~s~~~~~~a~~~~~~~~-----~-~~~~~~~d~~~~ 179 (286)
T 3m70_A 111 DVVDAAK--IISPCKVLDLGCGQGRNSLYLSLLG---YDVTSWDHNENSIAFLNETKEKEN-----L-NISTALYDINAA 179 (286)
T ss_dssp HHHHHHH--HSCSCEEEEESCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT-----C-CEEEEECCGGGC
T ss_pred HHHHHhh--ccCCCcEEEECCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHHcC-----C-ceEEEEeccccc
Confidence 3445554 3478899999999999999999873 379999999999999999998753 2 799999999775
Q ss_pred CcCCCCccEEEecCcchhhH--------HHHHHHhccCCeEEEEeC
Q psy7834 280 HAAEGPYDVIYVGGAVHHYP--------FKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 280 ~~~~~~fD~i~s~~~~~~~~--------~~~~~~L~pgG~l~~~~~ 317 (492)
.. .++||+|+++.++++++ .++.++|+|||++++.+.
T Consensus 180 ~~-~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 180 NI-QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp CC-CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cc-cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 54 67899999999998774 278899999999887543
No 118
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.48 E-value=2.4e-13 Score=131.75 Aligned_cols=106 Identities=25% Similarity=0.315 Sum_probs=87.9
Q ss_pred ccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc-CCCCc
Q psy7834 208 YLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA-AEGPY 286 (492)
Q Consensus 208 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~f 286 (492)
.+.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|+++....+ ...+++++++|+.+.+. .+++|
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~f 134 (298)
T 1ri5_A 61 YTKRGDSVLDLGCGKGGDLLKYERAG--IGEYYGVDIAEVSINDARVRARNMK----RRFKVFFRAQDSYGRHMDLGKEF 134 (298)
T ss_dssp HCCTTCEEEEETCTTTTTHHHHHHHT--CSEEEEEESCHHHHHHHHHHHHTSC----CSSEEEEEESCTTTSCCCCSSCE
T ss_pred hCCCCCeEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhcC----CCccEEEEECCccccccCCCCCc
Confidence 36788999999999999999988863 4589999999999999999987643 12479999999987655 46789
Q ss_pred cEEEecCcchhh----H------HHHHHHhccCCeEEEEeCCC
Q psy7834 287 DVIYVGGAVHHY----P------FKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 287 D~i~s~~~~~~~----~------~~~~~~L~pgG~l~~~~~~~ 319 (492)
|+|++..++|++ . .++.++|||||++++.++..
T Consensus 135 D~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 135 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 999999988762 2 27889999999999987654
No 119
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.48 E-value=6.8e-14 Score=131.40 Aligned_cols=99 Identities=20% Similarity=0.339 Sum_probs=84.2
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
..++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|+++... .+++++++|+...+.++++||+
T Consensus 41 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~~~~~~~fD~ 110 (243)
T 3bkw_A 41 EVGGLRIVDLGCGFGWFCRWAHEHG--ASYVLGLDLSEKMLARARAAGPD--------TGITYERADLDKLHLPQDSFDL 110 (243)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHTSCS--------SSEEEEECCGGGCCCCTTCEEE
T ss_pred ccCCCEEEEEcCcCCHHHHHHHHCC--CCeEEEEcCCHHHHHHHHHhccc--------CCceEEEcChhhccCCCCCceE
Confidence 3468899999999999999999873 23899999999999999987543 3699999999876666789999
Q ss_pred EEecCcchhhH------HHHHHHhccCCeEEEEeC
Q psy7834 289 IYVGGAVHHYP------FKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 289 i~s~~~~~~~~------~~~~~~L~pgG~l~~~~~ 317 (492)
|++..++++++ .++.++|||||++++.+.
T Consensus 111 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 111 AYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEeccccccchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 99999988775 378999999999999764
No 120
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.48 E-value=1.2e-13 Score=129.81 Aligned_cols=112 Identities=18% Similarity=0.205 Sum_probs=90.6
Q ss_pred HHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCC
Q psy7834 198 HAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGR 277 (492)
Q Consensus 198 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 277 (492)
...+.+.+.....++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++....+ .+++++++|+.
T Consensus 24 ~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~s~~~~~~a~~~~~~~~------~~~~~~~~d~~ 94 (246)
T 1y8c_A 24 SDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKF---KNTWAVDLSQEMLSEAENKFRSQG------LKPRLACQDIS 94 (246)
T ss_dssp HHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGS---SEEEEECSCHHHHHHHHHHHHHTT------CCCEEECCCGG
T ss_pred HHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCC---CcEEEEECCHHHHHHHHHHHhhcC------CCeEEEecccc
Confidence 445556665333477899999999999999998873 479999999999999999987642 26899999987
Q ss_pred CCCcCCCCccEEEecC-cchhh---HH------HHHHHhccCCeEEEEeCCC
Q psy7834 278 EGHAAEGPYDVIYVGG-AVHHY---PF------KLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 278 ~~~~~~~~fD~i~s~~-~~~~~---~~------~~~~~L~pgG~l~~~~~~~ 319 (492)
+.+.+ ++||+|++.. +++|+ .+ ++.++|||||++++.++..
T Consensus 95 ~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 95 NLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp GCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred cCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 75544 7899999998 99888 32 7889999999999977543
No 121
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.48 E-value=1.9e-13 Score=127.76 Aligned_cols=103 Identities=29% Similarity=0.357 Sum_probs=84.6
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC---CcCCCC
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG---HAAEGP 285 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~ 285 (492)
+.++.+|||+|||+|.++..+++..++.++|+|+|+|+.|++.+.++++.+ .+++++++|+.+. +...++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-------~~v~~~~~d~~~~~~~~~~~~~ 147 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-------TNIIPVIEDARHPHKYRMLIAM 147 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-------TTEEEECSCTTCGGGGGGGCCC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-------CCeEEEEcccCChhhhcccCCc
Confidence 567889999999999999999999766789999999999998888887663 4799999999763 224578
Q ss_pred ccEEEecCcchhh----HHHHHHHhccCCeEEEEeCC
Q psy7834 286 YDVIYVGGAVHHY----PFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 286 fD~i~s~~~~~~~----~~~~~~~L~pgG~l~~~~~~ 318 (492)
||+|+++....+. ..++.++|||||++++++.+
T Consensus 148 ~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 148 VDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred EEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 9999998664322 34689999999999997643
No 122
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.47 E-value=1e-13 Score=126.64 Aligned_cols=116 Identities=17% Similarity=0.157 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEcc
Q psy7834 196 KVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGD 275 (492)
Q Consensus 196 ~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d 275 (492)
.+...+++.+... .++.+|||+|||+|.++..++++. ..+|+|+|+|+.|++.|++++..++ ..+++++++|
T Consensus 40 ~~~~~l~~~l~~~-~~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~-----~~~v~~~~~D 111 (202)
T 2fpo_A 40 RVRETLFNWLAPV-IVDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLK-----AGNARVVNSN 111 (202)
T ss_dssp HHHHHHHHHHHHH-HTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTT-----CCSEEEECSC
T ss_pred HHHHHHHHHHHhh-cCCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcC-----CCcEEEEECC
Confidence 4445555555421 257899999999999999887764 2489999999999999999998754 3589999999
Q ss_pred CCCC-CcCCCCccEEEecCcch-----hhHHHHHH--HhccCCeEEEEeCCC
Q psy7834 276 GREG-HAAEGPYDVIYVGGAVH-----HYPFKLMD--QLKPGGVMWFTIGNA 319 (492)
Q Consensus 276 ~~~~-~~~~~~fD~i~s~~~~~-----~~~~~~~~--~L~pgG~l~~~~~~~ 319 (492)
+.+. +...++||+|+++..++ .+...+.+ +|+|||++++++.+.
T Consensus 112 ~~~~~~~~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 112 AMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp HHHHHSSCCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred HHHHHhhcCCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 8652 33456899999987743 12234544 499999999987543
No 123
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.47 E-value=2.8e-13 Score=122.23 Aligned_cols=112 Identities=16% Similarity=0.216 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCc--EEEEEc
Q psy7834 197 VHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGR--VQFVDG 274 (492)
Q Consensus 197 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~--v~~~~~ 274 (492)
....+++.+. ..++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|++++...+ ..+ ++++.+
T Consensus 40 ~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~ 109 (194)
T 1dus_A 40 GTKILVENVV--VDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNN-----LDNYDIRVVHS 109 (194)
T ss_dssp HHHHHHHHCC--CCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTT-----CTTSCEEEEEC
T ss_pred HHHHHHHHcc--cCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcC-----CCccceEEEEC
Confidence 3455555553 457889999999999999999887 4589999999999999999988753 334 999999
Q ss_pred cCCCCCcCCCCccEEEecCcchhh-------HHHHHHHhccCCeEEEEeCCC
Q psy7834 275 DGREGHAAEGPYDVIYVGGAVHHY-------PFKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 275 d~~~~~~~~~~fD~i~s~~~~~~~-------~~~~~~~L~pgG~l~~~~~~~ 319 (492)
|+.+. ...++||+|+++..+++. ..++.++|+|||++++..+..
T Consensus 110 d~~~~-~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 110 DLYEN-VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp STTTT-CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred chhcc-cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 98763 346789999999887652 237889999999999987554
No 124
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.47 E-value=4.9e-13 Score=133.10 Aligned_cols=120 Identities=23% Similarity=0.263 Sum_probs=95.4
Q ss_pred cChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE
Q psy7834 193 SSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV 272 (492)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~ 272 (492)
..+.+.+.++..+. ..++.+|||+|||+|.++..++...++..+|+|+|+|+.|++.|++|+..++ ..+++++
T Consensus 187 l~~~la~~l~~~~~--~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g-----~~~i~~~ 259 (354)
T 3tma_A 187 LTPVLAQALLRLAD--ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG-----LSWIRFL 259 (354)
T ss_dssp CCHHHHHHHHHHTT--CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT-----CTTCEEE
T ss_pred cCHHHHHHHHHHhC--CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC-----CCceEEE
Confidence 34445455555443 5778899999999999999999987567789999999999999999998864 2379999
Q ss_pred EccCCCCCcCCCCccEEEecCcch--------------hhHHHHHHHhccCCeEEEEeCCC
Q psy7834 273 DGDGREGHAAEGPYDVIYVGGAVH--------------HYPFKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 273 ~~d~~~~~~~~~~fD~i~s~~~~~--------------~~~~~~~~~L~pgG~l~~~~~~~ 319 (492)
++|+.+.+...++||+|+++..+. .+.+++.++|||||++++.++..
T Consensus 260 ~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 260 RADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp ECCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred eCChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 999987666667799999986542 22347889999999999987643
No 125
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.47 E-value=1.9e-13 Score=131.14 Aligned_cols=105 Identities=25% Similarity=0.390 Sum_probs=88.6
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhh-CCCCCCCCcEEEEEccCCCCCcCCCCcc
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTY-YPNLMEGGRVQFVDGDGREGHAAEGPYD 287 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~fD 287 (492)
+.++.+|||+|||+|.++..+++..++.++|+++|+|+.+++.|++++..+ + ..+++++++|+.+ +.++++||
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g-----~~~v~~~~~d~~~-~~~~~~fD 181 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD-----IGNVRTSRSDIAD-FISDQMYD 181 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC-----CTTEEEECSCTTT-CCCSCCEE
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC-----CCcEEEEECchhc-cCcCCCcc
Confidence 678899999999999999999998656789999999999999999998774 3 3579999999976 44567899
Q ss_pred EEEecCcc-hhhHHHHHHHhccCCeEEEEeCCC
Q psy7834 288 VIYVGGAV-HHYPFKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 288 ~i~s~~~~-~~~~~~~~~~L~pgG~l~~~~~~~ 319 (492)
+|+++..- ..+.+++.++|||||++++.++..
T Consensus 182 ~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 182 AVIADIPDPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp EEEECCSCGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred EEEEcCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 99986432 345578999999999999988654
No 126
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.47 E-value=2.4e-13 Score=122.41 Aligned_cols=117 Identities=23% Similarity=0.342 Sum_probs=93.0
Q ss_pred cChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE
Q psy7834 193 SSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV 272 (492)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~ 272 (492)
+.+.+...+++.+. +.++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.|++++...+ ...+++++
T Consensus 17 ~~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~----~~~~~~~~ 87 (192)
T 1l3i_A 17 TAMEVRCLIMCLAE--PGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHG----LGDNVTLM 87 (192)
T ss_dssp CCHHHHHHHHHHHC--CCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTT----CCTTEEEE
T ss_pred ChHHHHHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcC----CCcceEEE
Confidence 44555666666664 6788999999999999999998875 589999999999999999988753 12579999
Q ss_pred EccCCCCCcCCCCccEEEecCcchhhH---HHHHHHhccCCeEEEEeCC
Q psy7834 273 DGDGREGHAAEGPYDVIYVGGAVHHYP---FKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 273 ~~d~~~~~~~~~~fD~i~s~~~~~~~~---~~~~~~L~pgG~l~~~~~~ 318 (492)
++|+.+.....++||+|+++..++++. .++.++|+|||++++....
T Consensus 88 ~~d~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 88 EGDAPEALCKIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp ESCHHHHHTTSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEECB
T ss_pred ecCHHHhcccCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 999765222225899999998876654 4888999999999997643
No 127
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.47 E-value=2.2e-13 Score=136.32 Aligned_cols=111 Identities=29% Similarity=0.387 Sum_probs=90.2
Q ss_pred HHHHHHHHhcc----CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEc
Q psy7834 199 AQALEILKDYL----KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDG 274 (492)
Q Consensus 199 ~~~~~~l~~~~----~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~ 274 (492)
..+++.+...+ .++.+|||+|||+|.++..+++.. .+|+++|+|+.|++.|++++..++ .+++++++
T Consensus 217 ~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g---~~V~gvDis~~al~~A~~n~~~~~------~~v~~~~~ 287 (381)
T 3dmg_A 217 LLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMG---AEVVGVEDDLASVLSLQKGLEANA------LKAQALHS 287 (381)
T ss_dssp HHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTT---CEEEEEESBHHHHHHHHHHHHHTT------CCCEEEEC
T ss_pred HHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcC------CCeEEEEc
Confidence 44555554333 367899999999999999999873 489999999999999999998754 24899999
Q ss_pred cCCCCCcCCCCccEEEecCcchh-----------hHHHHHHHhccCCeEEEEeCC
Q psy7834 275 DGREGHAAEGPYDVIYVGGAVHH-----------YPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 275 d~~~~~~~~~~fD~i~s~~~~~~-----------~~~~~~~~L~pgG~l~~~~~~ 318 (492)
|+.+....+++||+|+++..+|+ +..++.+.|||||++++.+.+
T Consensus 288 D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 288 DVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp STTTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred chhhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 99876655689999999988775 224788999999999998754
No 128
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.47 E-value=1.8e-13 Score=131.54 Aligned_cols=102 Identities=24% Similarity=0.228 Sum_probs=85.9
Q ss_pred ccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCcc
Q psy7834 208 YLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYD 287 (492)
Q Consensus 208 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 287 (492)
.++++.+|||+|||+|.++..+++.. +. +|+|+|+|+.|++.|++|+..++ ...+++++++|+.+... .++||
T Consensus 122 ~~~~~~~VLDlgcG~G~~~~~la~~~-~~-~V~~vD~s~~~~~~a~~n~~~n~----~~~~v~~~~~D~~~~~~-~~~fD 194 (278)
T 2frn_A 122 VAKPDELVVDMFAGIGHLSLPIAVYG-KA-KVIAIEKDPYTFKFLVENIHLNK----VEDRMSAYNMDNRDFPG-ENIAD 194 (278)
T ss_dssp HCCTTCEEEETTCTTTTTHHHHHHHT-CC-EEEEECCCHHHHHHHHHHHHHTT----CTTTEEEECSCTTTCCC-CSCEE
T ss_pred hCCCCCEEEEecccCCHHHHHHHHhC-CC-EEEEEECCHHHHHHHHHHHHHcC----CCceEEEEECCHHHhcc-cCCcc
Confidence 36779999999999999999999986 33 79999999999999999998864 22359999999987654 67899
Q ss_pred EEEecCcch--hhHHHHHHHhccCCeEEEEe
Q psy7834 288 VIYVGGAVH--HYPFKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 288 ~i~s~~~~~--~~~~~~~~~L~pgG~l~~~~ 316 (492)
+|+++.... .+.+++.++|||||++++..
T Consensus 195 ~Vi~~~p~~~~~~l~~~~~~LkpgG~l~~~~ 225 (278)
T 2frn_A 195 RILMGYVVRTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp EEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCchhHHHHHHHHHHHCCCCeEEEEEE
Confidence 999986543 45568999999999999864
No 129
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.47 E-value=6.9e-14 Score=124.82 Aligned_cols=116 Identities=14% Similarity=0.163 Sum_probs=87.4
Q ss_pred HHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCC
Q psy7834 198 HAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGR 277 (492)
Q Consensus 198 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 277 (492)
...+++.+.. ..++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|++++...+ ...+++++.+|+.
T Consensus 19 ~~~~~~~l~~-~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~~~d~~ 91 (177)
T 2esr_A 19 RGAIFNMIGP-YFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTK----AENRFTLLKMEAE 91 (177)
T ss_dssp HHHHHHHHCS-CCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTT----CGGGEEEECSCHH
T ss_pred HHHHHHHHHh-hcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcC----CCCceEEEECcHH
Confidence 3445555532 356789999999999999999987 34689999999999999999998753 1247999999986
Q ss_pred CC-CcCCCCccEEEecCcchh-----hHHHHH--HHhccCCeEEEEeCCCc
Q psy7834 278 EG-HAAEGPYDVIYVGGAVHH-----YPFKLM--DQLKPGGVMWFTIGNAE 320 (492)
Q Consensus 278 ~~-~~~~~~fD~i~s~~~~~~-----~~~~~~--~~L~pgG~l~~~~~~~~ 320 (492)
+. ....++||+|+++..++. +...+. ++|+|||++++.+....
T Consensus 92 ~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 92 RAIDCLTGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HHHHHBCSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HhHHhhcCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 52 223467999999877531 123455 88999999999876543
No 130
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.47 E-value=4.4e-13 Score=128.75 Aligned_cols=120 Identities=28% Similarity=0.369 Sum_probs=97.1
Q ss_pred cChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE
Q psy7834 193 SSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV 272 (492)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~ 272 (492)
..|.....++..+. +.++.+|||+|||+|.++..+++..++.++|+++|+|+.+++.|++++...+ ...+++++
T Consensus 96 ~~~~~~~~i~~~~~--~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~v~~~ 169 (277)
T 1o54_A 96 VYPKDSSFIAMMLD--VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG----LIERVTIK 169 (277)
T ss_dssp CCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT----CGGGEEEE
T ss_pred cCHHHHHHHHHHhC--CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC----CCCCEEEE
Confidence 44444555666554 6788999999999999999999986677899999999999999999988753 12479999
Q ss_pred EccCCCCCcCCCCccEEEecCcch-hhHHHHHHHhccCCeEEEEeCCC
Q psy7834 273 DGDGREGHAAEGPYDVIYVGGAVH-HYPFKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 273 ~~d~~~~~~~~~~fD~i~s~~~~~-~~~~~~~~~L~pgG~l~~~~~~~ 319 (492)
.+|+.+. .++++||+|+++..-. .+..++.++|+|||++++..+..
T Consensus 170 ~~d~~~~-~~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 216 (277)
T 1o54_A 170 VRDISEG-FDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCPTT 216 (277)
T ss_dssp CCCGGGC-CSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEESSH
T ss_pred ECCHHHc-ccCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 9998765 4456899999976543 55678999999999999988654
No 131
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=1.1e-13 Score=130.42 Aligned_cols=104 Identities=22% Similarity=0.307 Sum_probs=84.4
Q ss_pred HHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc
Q psy7834 202 LEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA 281 (492)
Q Consensus 202 ~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 281 (492)
+..+...+.++.+|||+|||+|.++..+++.. + +|+|+|+|+.|++.|+++... .+++++++|+.+...
T Consensus 47 ~~~~~~~~~~~~~vLD~GcG~G~~~~~la~~~-~--~v~gvD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~~~ 115 (245)
T 3ggd_A 47 LPRFELLFNPELPLIDFACGNGTQTKFLSQFF-P--RVIGLDVSKSALEIAAKENTA--------ANISYRLLDGLVPEQ 115 (245)
T ss_dssp HHHHTTTSCTTSCEEEETCTTSHHHHHHHHHS-S--CEEEEESCHHHHHHHHHHSCC--------TTEEEEECCTTCHHH
T ss_pred HHHHhhccCCCCeEEEEcCCCCHHHHHHHHhC-C--CEEEEECCHHHHHHHHHhCcc--------cCceEEECccccccc
Confidence 34444446788999999999999999999986 3 799999999999999988632 379999999876432
Q ss_pred C-----CCCccEEEecCcchhhH--------HHHHHHhccCCeEEEEe
Q psy7834 282 A-----EGPYDVIYVGGAVHHYP--------FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 282 ~-----~~~fD~i~s~~~~~~~~--------~~~~~~L~pgG~l~~~~ 316 (492)
. ..+||+|+++.++++++ .++.++|||||++++..
T Consensus 116 ~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 116 AAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp HHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred ccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 2 13499999999998887 27889999999988754
No 132
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.47 E-value=1.3e-13 Score=122.01 Aligned_cols=118 Identities=13% Similarity=0.039 Sum_probs=89.9
Q ss_pred ChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEE
Q psy7834 194 SPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVD 273 (492)
Q Consensus 194 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~ 273 (492)
...+...+++.+...++++.+|||+|||+|.++..+++.. + +|+|+|+|+.|++.|++++...+ . ++++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~--~v~~vD~~~~~~~~a~~~~~~~~-----~-~~~~~~ 94 (171)
T 1ws6_A 24 PVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEG-W--EAVLVEKDPEAVRLLKENVRRTG-----L-GARVVA 94 (171)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTT-C--EEEEECCCHHHHHHHHHHHHHHT-----C-CCEEEC
T ss_pred HHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCC-C--eEEEEeCCHHHHHHHHHHHHHcC-----C-ceEEEe
Confidence 3445556666665434478899999999999999999874 4 49999999999999999998763 2 789999
Q ss_pred ccCCCCCc----CCCCccEEEecCcch----hhHHHHH--HHhccCCeEEEEeCCCc
Q psy7834 274 GDGREGHA----AEGPYDVIYVGGAVH----HYPFKLM--DQLKPGGVMWFTIGNAE 320 (492)
Q Consensus 274 ~d~~~~~~----~~~~fD~i~s~~~~~----~~~~~~~--~~L~pgG~l~~~~~~~~ 320 (492)
+|+.+... ..++||+|+++..++ .+...+. ++|+|||++++.+.+..
T Consensus 95 ~d~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 95 LPVEVFLPEAKAQGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp SCHHHHHHHHHHTTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred ccHHHHHHhhhccCCceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 99865221 124799999996553 2334566 88999999999876543
No 133
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.47 E-value=4.5e-13 Score=135.12 Aligned_cols=115 Identities=20% Similarity=0.211 Sum_probs=89.4
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHH-------HHHHHhhCCCCCCCC
Q psy7834 195 PKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQA-------NKSMHTYYPNLMEGG 267 (492)
Q Consensus 195 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a-------~~~~~~~~~~~~~~~ 267 (492)
|.+.+.+++.+. +.++.+|||+|||+|.++..+|+.. +..+|+|+|+|+.+++.| ++++...+. ...
T Consensus 228 p~~v~~ml~~l~--l~~g~~VLDLGCGsG~la~~LA~~~-g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl---~~~ 301 (433)
T 1u2z_A 228 PNFLSDVYQQCQ--LKKGDTFMDLGSGVGNCVVQAALEC-GCALSFGCEIMDDASDLTILQYEELKKRCKLYGM---RLN 301 (433)
T ss_dssp HHHHHHHHHHTT--CCTTCEEEEESCTTSHHHHHHHHHH-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTB---CCC
T ss_pred HHHHHHHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCC---CCC
Confidence 677777777764 7789999999999999999999987 456899999999999998 888876531 135
Q ss_pred cEEEEEccCCCC-Cc---CCCCccEEEecCcc--hhhH---HHHHHHhccCCeEEEE
Q psy7834 268 RVQFVDGDGREG-HA---AEGPYDVIYVGGAV--HHYP---FKLMDQLKPGGVMWFT 315 (492)
Q Consensus 268 ~v~~~~~d~~~~-~~---~~~~fD~i~s~~~~--~~~~---~~~~~~L~pgG~l~~~ 315 (492)
+++++++|.... +. ..++||+|+++..+ ..++ .++.++|||||++++.
T Consensus 302 nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 302 NVEFSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp CEEEEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred ceEEEEcCccccccccccccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEe
Confidence 899999865422 11 24689999987544 2222 3889999999999985
No 134
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.47 E-value=1.3e-13 Score=123.98 Aligned_cols=119 Identities=15% Similarity=0.149 Sum_probs=89.1
Q ss_pred ChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEE
Q psy7834 194 SPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVD 273 (492)
Q Consensus 194 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~ 273 (492)
...+...+++.+.. ..++.+|||+|||+|.++..+++. ...+|+|+|+|+.|++.|++++..++ ..+++++++
T Consensus 28 ~~~~~~~~~~~l~~-~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~~ 100 (187)
T 2fhp_A 28 TDKVKESIFNMIGP-YFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITK----EPEKFEVRK 100 (187)
T ss_dssp CHHHHHHHHHHHCS-CCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHT----CGGGEEEEE
T ss_pred HHHHHHHHHHHHHh-hcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhC----CCcceEEEE
Confidence 34455556665532 346889999999999999998875 34689999999999999999998764 124799999
Q ss_pred ccCCCCCc----CCCCccEEEecCcchh--hH---HHH--HHHhccCCeEEEEeCCC
Q psy7834 274 GDGREGHA----AEGPYDVIYVGGAVHH--YP---FKL--MDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 274 ~d~~~~~~----~~~~fD~i~s~~~~~~--~~---~~~--~~~L~pgG~l~~~~~~~ 319 (492)
+|+.+... ..++||+|+++..++. .. ..+ .++|+|||++++..+..
T Consensus 101 ~d~~~~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 101 MDANRALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp SCHHHHHHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CcHHHHHHHHHhcCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 99865321 1578999999877431 11 244 67799999999987554
No 135
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.46 E-value=2.5e-13 Score=124.33 Aligned_cols=116 Identities=14% Similarity=0.155 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhc-cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEcc
Q psy7834 197 VHAQALEILKDY-LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGD 275 (492)
Q Consensus 197 ~~~~~~~~l~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d 275 (492)
+...+++.+... ..++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.|++++...+ ..+++++++|
T Consensus 50 ~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d 123 (207)
T 1jsx_A 50 LVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELK-----LENIEPVQSR 123 (207)
T ss_dssp HHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTT-----CSSEEEEECC
T ss_pred HHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcC-----CCCeEEEecc
Confidence 344555555421 1247899999999999999999886 67799999999999999999988753 3469999999
Q ss_pred CCCCCcCCCCccEEEecCcc--hhhHHHHHHHhccCCeEEEEeCCC
Q psy7834 276 GREGHAAEGPYDVIYVGGAV--HHYPFKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 276 ~~~~~~~~~~fD~i~s~~~~--~~~~~~~~~~L~pgG~l~~~~~~~ 319 (492)
+.+.. +.++||+|+++..- ..+..++.++|+|||++++..+..
T Consensus 124 ~~~~~-~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 168 (207)
T 1jsx_A 124 VEEFP-SEPPFDGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQM 168 (207)
T ss_dssp TTTSC-CCSCEEEEECSCSSSHHHHHHHHTTSEEEEEEEEEEESSC
T ss_pred hhhCC-ccCCcCEEEEeccCCHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 97654 45689999987532 233357889999999999987643
No 136
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.46 E-value=4.5e-14 Score=136.75 Aligned_cols=117 Identities=17% Similarity=0.200 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccC
Q psy7834 197 VHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDG 276 (492)
Q Consensus 197 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~ 276 (492)
....+.+.+. ..++.+|||||||+|.++..+++.. . +|+|+|+|+.|++.|+++....+.. ....++.+..+|+
T Consensus 45 ~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~gvD~s~~~l~~a~~~~~~~~~~-~~~~~~~~~~~d~ 118 (293)
T 3thr_A 45 YKAWLLGLLR--QHGCHRVLDVACGTGVDSIMLVEEG-F--SVTSVDASDKMLKYALKERWNRRKE-PAFDKWVIEEANW 118 (293)
T ss_dssp HHHHHHHHHH--HTTCCEEEETTCTTSHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHTTTS-HHHHTCEEEECCG
T ss_pred HHHHHHHHhc--ccCCCEEEEecCCCCHHHHHHHHCC-C--eEEEEECCHHHHHHHHHhhhhcccc-cccceeeEeecCh
Confidence 3445555554 4567899999999999999999873 3 8999999999999999887442210 0123678999998
Q ss_pred CCCC---cCCCCccEEEec-CcchhhHH-------------HHHHHhccCCeEEEEeCCC
Q psy7834 277 REGH---AAEGPYDVIYVG-GAVHHYPF-------------KLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 277 ~~~~---~~~~~fD~i~s~-~~~~~~~~-------------~~~~~L~pgG~l~~~~~~~ 319 (492)
...+ ..+++||+|++. .+++|+++ ++.++|||||++++.++..
T Consensus 119 ~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 119 LTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp GGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred hhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 7654 467899999998 77776643 7889999999999987654
No 137
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.46 E-value=9.7e-14 Score=130.36 Aligned_cols=96 Identities=21% Similarity=0.222 Sum_probs=80.2
Q ss_pred ccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC--CcCCCC
Q psy7834 208 YLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG--HAAEGP 285 (492)
Q Consensus 208 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~ 285 (492)
.++++.+|||||||+|.++..+++.. .+|+|+|+|+.|++.|+++ ++++.+|+.+. +.++++
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~-------------~~~~~~d~~~~~~~~~~~~ 101 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEEG---IESIGVDINEDMIKFCEGK-------------FNVVKSDAIEYLKSLPDKY 101 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHHT---CCEEEECSCHHHHHHHHTT-------------SEEECSCHHHHHHTSCTTC
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhCC---CcEEEEECCHHHHHHHHhh-------------cceeeccHHHHhhhcCCCC
Confidence 35678999999999999999999873 3699999999999998754 57888887653 445689
Q ss_pred ccEEEecCcchhhH--------HHHHHHhccCCeEEEEeCCC
Q psy7834 286 YDVIYVGGAVHHYP--------FKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 286 fD~i~s~~~~~~~~--------~~~~~~L~pgG~l~~~~~~~ 319 (492)
||+|++..+++|++ .++.++|||||++++.++..
T Consensus 102 fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 143 (240)
T 3dli_A 102 LDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNP 143 (240)
T ss_dssp BSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECT
T ss_pred eeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 99999999998886 27889999999999987543
No 138
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.46 E-value=2.8e-13 Score=123.50 Aligned_cols=100 Identities=20% Similarity=0.157 Sum_probs=81.7
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
++++ +|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++....+ .+++++++|+.+.+.++++||+
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~~~~~~fD~ 97 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASLG---YEVTAVDQSSVGLAKAKQLAQEKG------VKITTVQSNLADFDIVADAWEG 97 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTTT---CEEEEECSSHHHHHHHHHHHHHHT------CCEEEECCBTTTBSCCTTTCSE
T ss_pred CCCC-CEEEECCCCCHhHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhcC------CceEEEEcChhhcCCCcCCccE
Confidence 5677 99999999999999998763 489999999999999999987753 2789999999876666789999
Q ss_pred EEecCcchh------hHHHHHHHhccCCeEEEEeCC
Q psy7834 289 IYVGGAVHH------YPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 289 i~s~~~~~~------~~~~~~~~L~pgG~l~~~~~~ 318 (492)
|++.....+ +..++.++|||||++++.+..
T Consensus 98 v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 98 IVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp EEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred EEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 998643221 123788999999999997654
No 139
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.46 E-value=3.9e-13 Score=131.48 Aligned_cols=120 Identities=18% Similarity=0.137 Sum_probs=89.9
Q ss_pred HHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCC--CCCCcEEEEEccC
Q psy7834 199 AQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNL--MEGGRVQFVDGDG 276 (492)
Q Consensus 199 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~--~~~~~v~~~~~d~ 276 (492)
..+++.+...++++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|+++....+... ....+++++++|+
T Consensus 22 ~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~ 99 (313)
T 3bgv_A 22 GEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADS 99 (313)
T ss_dssp HHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCT
T ss_pred HHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecc
Confidence 4445555433457889999999999999999875 45689999999999999999886531000 0124799999999
Q ss_pred CCCC----c--CCCCccEEEecCcchhh----H------HHHHHHhccCCeEEEEeCCCc
Q psy7834 277 REGH----A--AEGPYDVIYVGGAVHHY----P------FKLMDQLKPGGVMWFTIGNAE 320 (492)
Q Consensus 277 ~~~~----~--~~~~fD~i~s~~~~~~~----~------~~~~~~L~pgG~l~~~~~~~~ 320 (492)
...+ . +.++||+|+++.++||+ + .++.++|||||.++++++...
T Consensus 100 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 159 (313)
T 3bgv_A 100 SKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSF 159 (313)
T ss_dssp TTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHH
T ss_pred cccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChH
Confidence 7654 2 24589999999999887 2 277899999999999876543
No 140
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.46 E-value=1.6e-13 Score=126.22 Aligned_cols=101 Identities=18% Similarity=0.181 Sum_probs=81.9
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC-CcCCCCccE
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG-HAAEGPYDV 288 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~ 288 (492)
.++.+|||+|||+|..+..+++..++.++|+++|+|+.+++.|++++...+ ...+++++++|+.+. +...+ ||+
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~-fD~ 129 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG----LIDRVELQVGDPLGIAAGQRD-IDI 129 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS----GGGGEEEEESCHHHHHTTCCS-EEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC----CCceEEEEEecHHHHhccCCC-CCE
Confidence 456799999999999999999987447899999999999999999988754 124699999998653 22345 999
Q ss_pred EEecCcchhh---HHHHHHHhccCCeEEEE
Q psy7834 289 IYVGGAVHHY---PFKLMDQLKPGGVMWFT 315 (492)
Q Consensus 289 i~s~~~~~~~---~~~~~~~L~pgG~l~~~ 315 (492)
|+++...... .+++.++|||||++++.
T Consensus 130 v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 130 LFMDCDVFNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp EEEETTTSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEcCChhhhHHHHHHHHHhcCCCeEEEEE
Confidence 9988654433 35888999999999985
No 141
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.45 E-value=9e-13 Score=117.77 Aligned_cols=114 Identities=17% Similarity=0.283 Sum_probs=90.1
Q ss_pred ccChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEE
Q psy7834 192 MSSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQF 271 (492)
Q Consensus 192 ~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~ 271 (492)
...+.+...+++.+. +.++.+|||+|||+|.++..+++ +..+|+|+|+|+.|++.|++++..++ ..++++
T Consensus 18 ~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~~~ 87 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLN--LNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFN-----IKNCQI 87 (183)
T ss_dssp CCCHHHHHHHHHHHC--CCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTT-----CCSEEE
T ss_pred cCHHHHHHHHHHHcC--CCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcC-----CCcEEE
Confidence 445566667777764 66788999999999999999987 45689999999999999999998753 357999
Q ss_pred EEccCCCCCcCCCCccEEEecCcchhhHH---HHHHHhccCCeEEEEeCCC
Q psy7834 272 VDGDGREGHAAEGPYDVIYVGGAVHHYPF---KLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 272 ~~~d~~~~~~~~~~fD~i~s~~~~~~~~~---~~~~~L~pgG~l~~~~~~~ 319 (492)
+++|+.+ +.++++||+|+++.. +...+ ++.+. |||++++.....
T Consensus 88 ~~~d~~~-~~~~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~~~~ 134 (183)
T 2yxd_A 88 IKGRAED-VLDKLEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANTIVL 134 (183)
T ss_dssp EESCHHH-HGGGCCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEESCH
T ss_pred EECCccc-cccCCCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEeccc
Confidence 9999876 444578999999887 44333 55555 999999987543
No 142
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.45 E-value=3.7e-13 Score=131.62 Aligned_cols=111 Identities=21% Similarity=0.295 Sum_probs=88.9
Q ss_pred HHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC
Q psy7834 200 QALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG 279 (492)
Q Consensus 200 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 279 (492)
.+...+. +.++.+|||+|||+|..+..+++..++.++|+|+|+|+.+++.+++++.+.+ ..+++++++|+...
T Consensus 109 l~~~~l~--~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g-----~~~v~~~~~D~~~~ 181 (315)
T 1ixk_A 109 YPPVALD--PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG-----VLNVILFHSSSLHI 181 (315)
T ss_dssp HHHHHHC--CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT-----CCSEEEESSCGGGG
T ss_pred HHHHHhC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC-----CCeEEEEECChhhc
Confidence 3344443 6788999999999999999999987666899999999999999999998864 35799999998765
Q ss_pred CcCCCCccEEEecCc------ch----------------------hhHHHHHHHhccCCeEEEEeC
Q psy7834 280 HAAEGPYDVIYVGGA------VH----------------------HYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 280 ~~~~~~fD~i~s~~~------~~----------------------~~~~~~~~~L~pgG~l~~~~~ 317 (492)
....++||+|+++.. ++ .+.+++.++|||||+|++++-
T Consensus 182 ~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 182 GELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp GGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 444568999998632 21 223478899999999999653
No 143
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.45 E-value=2.7e-13 Score=127.12 Aligned_cols=112 Identities=21% Similarity=0.328 Sum_probs=88.1
Q ss_pred HHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCC
Q psy7834 199 AQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGRE 278 (492)
Q Consensus 199 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 278 (492)
..++..+.. ..++.+|||||||+|+.+..+++..++.++|+++|+|+.+++.|++++...+ ...+++++.+|+.+
T Consensus 59 ~~~l~~l~~-~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g----~~~~i~~~~gda~~ 133 (237)
T 3c3y_A 59 GQLMSFVLK-LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG----VEHKINFIESDAML 133 (237)
T ss_dssp HHHHHHHHH-HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT----CGGGEEEEESCHHH
T ss_pred HHHHHHHHH-hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEEcCHHH
Confidence 344444432 4567899999999999999999987557899999999999999999998764 23479999999865
Q ss_pred CCc-------CCCCccEEEecCcchhhH---HHHHHHhccCCeEEEE
Q psy7834 279 GHA-------AEGPYDVIYVGGAVHHYP---FKLMDQLKPGGVMWFT 315 (492)
Q Consensus 279 ~~~-------~~~~fD~i~s~~~~~~~~---~~~~~~L~pgG~l~~~ 315 (492)
... ..++||+|++........ +++.+.|+|||++++.
T Consensus 134 ~l~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 134 ALDNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp HHHHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence 321 146899999987654433 5889999999999884
No 144
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.45 E-value=3.7e-13 Score=128.64 Aligned_cols=109 Identities=23% Similarity=0.292 Sum_probs=88.3
Q ss_pred HHHHHHHHhcc-CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCC
Q psy7834 199 AQALEILKDYL-KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGR 277 (492)
Q Consensus 199 ~~~~~~l~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 277 (492)
..+.+.+...+ .++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.|+++. .++.++.+|+.
T Consensus 72 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~ 140 (269)
T 1p91_A 72 DAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY----------PQVTFCVASSH 140 (269)
T ss_dssp HHHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC----------TTSEEEECCTT
T ss_pred HHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC----------CCcEEEEcchh
Confidence 44445554434 578899999999999999999886 4568999999999999998764 25789999998
Q ss_pred CCCcCCCCccEEEecCcchhhHHHHHHHhccCCeEEEEeCCC
Q psy7834 278 EGHAAEGPYDVIYVGGAVHHYPFKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 278 ~~~~~~~~fD~i~s~~~~~~~~~~~~~~L~pgG~l~~~~~~~ 319 (492)
..+..+++||+|++.... ....++.++|||||++++..+..
T Consensus 141 ~~~~~~~~fD~v~~~~~~-~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 141 RLPFSDTSMDAIIRIYAP-CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp SCSBCTTCEEEEEEESCC-CCHHHHHHHEEEEEEEEEEEECT
T ss_pred hCCCCCCceeEEEEeCCh-hhHHHHHHhcCCCcEEEEEEcCH
Confidence 766667899999987764 44579999999999999977543
No 145
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.45 E-value=2.1e-12 Score=121.70 Aligned_cols=119 Identities=27% Similarity=0.433 Sum_probs=95.3
Q ss_pred ccChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEE
Q psy7834 192 MSSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQF 271 (492)
Q Consensus 192 ~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~ 271 (492)
+..|.....++..+. +.++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|+++....+ ...++++
T Consensus 74 ~~~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~ 144 (248)
T 2yvl_A 74 IIYPKDSFYIALKLN--LNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFN----LGKNVKF 144 (248)
T ss_dssp CCCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTT----CCTTEEE
T ss_pred cccchhHHHHHHhcC--CCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcC----CCCcEEE
Confidence 344555556665554 678899999999999999999988 4589999999999999999987753 1257999
Q ss_pred EEccCCCCCcCCCCccEEEecCcch-hhHHHHHHHhccCCeEEEEeCCC
Q psy7834 272 VDGDGREGHAAEGPYDVIYVGGAVH-HYPFKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 272 ~~~d~~~~~~~~~~fD~i~s~~~~~-~~~~~~~~~L~pgG~l~~~~~~~ 319 (492)
+.+|+.+....+++||+|+++..-. .+.+++.++|+|||++++..+..
T Consensus 145 ~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 145 FNVDFKDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp ECSCTTTSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEESSH
T ss_pred EEcChhhcccCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 9999877542556899999876543 56678999999999999988754
No 146
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.45 E-value=5.7e-13 Score=127.59 Aligned_cols=100 Identities=18% Similarity=0.199 Sum_probs=81.8
Q ss_pred CCCceEEEeccc---cHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC-------
Q psy7834 211 PGAKVLDIGSGS---GYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH------- 280 (492)
Q Consensus 211 ~~~~vLDiGcG~---G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~------- 280 (492)
+..+|||||||+ |.++..+++.. +.++|+++|+|+.|++.|++++.. ..+++++++|+.+..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~-p~~~v~~vD~sp~~l~~Ar~~~~~-------~~~v~~~~~D~~~~~~~~~~~~ 148 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVN-PDARVVYVDIDPMVLTHGRALLAK-------DPNTAVFTADVRDPEYILNHPD 148 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHC-TTCEEEEEESSHHHHHHHHHHHTT-------CTTEEEEECCTTCHHHHHHSHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhC-CCCEEEEEECChHHHHHHHHhcCC-------CCCeEEEEeeCCCchhhhccch
Confidence 347999999999 99887766654 778999999999999999998753 247999999986521
Q ss_pred ----cCCCCccEEEecCcchhhHH--------HHHHHhccCCeEEEEeCC
Q psy7834 281 ----AAEGPYDVIYVGGAVHHYPF--------KLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 281 ----~~~~~fD~i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~~~ 318 (492)
....+||+|+++.++|++++ ++.++|+|||+|++....
T Consensus 149 ~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 149 VRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp HHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred hhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 12247999999999998863 788999999999997643
No 147
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.44 E-value=2e-13 Score=132.63 Aligned_cols=108 Identities=18% Similarity=0.145 Sum_probs=79.1
Q ss_pred CCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCC-CCCCcEEEEEccCCCC--------Cc
Q psy7834 211 PGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNL-MEGGRVQFVDGDGREG--------HA 281 (492)
Q Consensus 211 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~-~~~~~v~~~~~d~~~~--------~~ 281 (492)
++.+|||||||+|..+..+++.. .++|+|+|+|+.|++.|+++....+... ....+++|.+.|+... ..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 47899999999998766666542 4589999999999999999887643100 0001367888887221 12
Q ss_pred CCCCccEEEecCcchhh---------HHHHHHHhccCCeEEEEeCCCc
Q psy7834 282 AEGPYDVIYVGGAVHHY---------PFKLMDQLKPGGVMWFTIGNAE 320 (492)
Q Consensus 282 ~~~~fD~i~s~~~~~~~---------~~~~~~~L~pgG~l~~~~~~~~ 320 (492)
++++||+|++..++|++ ..++.++|||||+++++++...
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~ 173 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGD 173 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHH
Confidence 45789999998888753 2389999999999999876543
No 148
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.44 E-value=2.8e-13 Score=131.63 Aligned_cols=115 Identities=18% Similarity=0.265 Sum_probs=87.2
Q ss_pred HHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccC
Q psy7834 197 VHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDG 276 (492)
Q Consensus 197 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~ 276 (492)
....+++.+. .++.+|||||||+|.++..+++.. .+|+|+|+|+.|++.|++++...+.. ...+++++++|+
T Consensus 71 ~~~~~~~~~~---~~~~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~~v~~~~~d~ 142 (299)
T 3g2m_A 71 EAREFATRTG---PVSGPVLELAAGMGRLTFPFLDLG---WEVTALELSTSVLAAFRKRLAEAPAD--VRDRCTLVQGDM 142 (299)
T ss_dssp HHHHHHHHHC---CCCSCEEEETCTTTTTHHHHHTTT---CCEEEEESCHHHHHHHHHHHHTSCHH--HHTTEEEEECBT
T ss_pred HHHHHHHhhC---CCCCcEEEEeccCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHhhcccc--cccceEEEeCch
Confidence 3444455442 345599999999999999999873 47999999999999999998763200 004799999999
Q ss_pred CCCCcCCCCccEEEec-CcchhhH--------HHHHHHhccCCeEEEEeCCCc
Q psy7834 277 REGHAAEGPYDVIYVG-GAVHHYP--------FKLMDQLKPGGVMWFTIGNAE 320 (492)
Q Consensus 277 ~~~~~~~~~fD~i~s~-~~~~~~~--------~~~~~~L~pgG~l~~~~~~~~ 320 (492)
.+.+. +++||+|++. ..+++++ .++.++|||||+|++.+....
T Consensus 143 ~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 143 SAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp TBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred hcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 87554 6799998854 5555554 378899999999999876543
No 149
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.44 E-value=3.7e-14 Score=130.36 Aligned_cols=101 Identities=25% Similarity=0.378 Sum_probs=65.0
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCC-----C
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAE-----G 284 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~ 284 (492)
.++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.|++++..++ . +++++++|+.+ +... +
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~-----~-~~~~~~~d~~~-~~~~~~~~~~ 100 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFG-----A-VVDWAAADGIE-WLIERAERGR 100 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC-------------------------CCHHHHHH-HHHHHHHTTC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhC-----C-ceEEEEcchHh-hhhhhhhccC
Confidence 678899999999999999999986 67799999999999999999987643 2 68899999866 3333 7
Q ss_pred CccEEEecCcchh--------------------------------hHHHHHHHhccCCe-EEEEeCC
Q psy7834 285 PYDVIYVGGAVHH--------------------------------YPFKLMDQLKPGGV-MWFTIGN 318 (492)
Q Consensus 285 ~fD~i~s~~~~~~--------------------------------~~~~~~~~L~pgG~-l~~~~~~ 318 (492)
+||+|+++..++. +..++.++|||||+ +++.++.
T Consensus 101 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 167 (215)
T 4dzr_A 101 PWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH 167 (215)
T ss_dssp CBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT
T ss_pred cccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC
Confidence 8999999754421 11245689999999 6666543
No 150
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.44 E-value=5.2e-13 Score=124.60 Aligned_cols=99 Identities=23% Similarity=0.280 Sum_probs=81.2
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCC----CCcCCC
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGRE----GHAAEG 284 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~----~~~~~~ 284 (492)
+.++.+|||+|||+|.++..+++..+ .++|+|+|+|+.|++.|++++... .++.++.+|+.. .+.. +
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~-------~~v~~~~~d~~~~~~~~~~~-~ 142 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER-------ENIIPILGDANKPQEYANIV-E 142 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC-------TTEEEEECCTTCGGGGTTTS-C
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC-------CCeEEEECCCCCcccccccC-c
Confidence 46788999999999999999999874 679999999999999999987642 579999999876 4434 6
Q ss_pred CccEEEecCcc----hhhHHHHHHHhccCCeEEEEe
Q psy7834 285 PYDVIYVGGAV----HHYPFKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 285 ~fD~i~s~~~~----~~~~~~~~~~L~pgG~l~~~~ 316 (492)
+||+|+....- ..+..++.+.|||||++++..
T Consensus 143 ~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 178 (230)
T 1fbn_A 143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI 178 (230)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEEE
Confidence 89999965332 223468899999999999963
No 151
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.44 E-value=9.1e-14 Score=134.64 Aligned_cols=102 Identities=18% Similarity=0.151 Sum_probs=75.9
Q ss_pred CCCCceEEEeccccHHHHHHH----HHhCCCCeE--EEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEE--EEccCCCCC-
Q psy7834 210 KPGAKVLDIGSGSGYLTACMA----HMVGPTGKV--YAVEHIEDLVAQANKSMHTYYPNLMEGGRVQF--VDGDGREGH- 280 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la----~~~~~~~~v--~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~--~~~d~~~~~- 280 (492)
.++.+|||||||+|.++..++ .+. +..+| +|+|+|++|++.|++++.... ...++.+ ..+++.+..
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~-~~~~v~~~~vD~S~~ml~~a~~~~~~~~----~~~~v~~~~~~~~~~~~~~ 125 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQY-PGVCINNEVVEPSAEQIAKYKELVAKTS----NLENVKFAWHKETSSEYQS 125 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHS-TTCEEEEEEECSCHHHHHHHHHHHHTCS----SCTTEEEEEECSCHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhC-CCceeeEEEEeCCHHHHHHHHHHHHhcc----CCCcceEEEEecchhhhhh
Confidence 356799999999998776443 332 45544 999999999999999876421 1235554 455543322
Q ss_pred -----cCCCCccEEEecCcchhhHH------HHHHHhccCCeEEEEe
Q psy7834 281 -----AAEGPYDVIYVGGAVHHYPF------KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 281 -----~~~~~fD~i~s~~~~~~~~~------~~~~~L~pgG~l~~~~ 316 (492)
..+++||+|++..++||+++ ++.++|||||++++..
T Consensus 126 ~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 126 RMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp HHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 24678999999999999874 8899999999999965
No 152
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.43 E-value=6.3e-13 Score=125.33 Aligned_cols=108 Identities=15% Similarity=0.173 Sum_probs=84.4
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCC-C--CCCCcEEEEEccCCC-CC--cC
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPN-L--MEGGRVQFVDGDGRE-GH--AA 282 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~-~--~~~~~v~~~~~d~~~-~~--~~ 282 (492)
++++.+|||||||+|.++..+++.. +..+|+|+|+|+.|++.|++++..+... . .+..+++++++|+.+ +. ..
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcc
Confidence 4577899999999999999999986 6778999999999999999988764000 0 023589999999876 22 34
Q ss_pred CCCccEEEecCcch--------------hhHHHHHHHhccCCeEEEEeC
Q psy7834 283 EGPYDVIYVGGAVH--------------HYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 283 ~~~fD~i~s~~~~~--------------~~~~~~~~~L~pgG~l~~~~~ 317 (492)
.+++|.|+....-. .+..++.++|+|||+|++.+.
T Consensus 126 ~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 126 KGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp TTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 67899998664433 355688999999999999654
No 153
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.43 E-value=6.1e-13 Score=123.77 Aligned_cols=101 Identities=24% Similarity=0.295 Sum_probs=83.6
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC---cCCCC
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH---AAEGP 285 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~ 285 (492)
+.++.+|||+|||+|.++..+++..++.++|+|+|+|+.|++.++++++.. .+++++++|+.+.. ...++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-------~~v~~~~~d~~~~~~~~~~~~~ 143 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-------RNIVPILGDATKPEEYRALVPK 143 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-------TTEEEEECCTTCGGGGTTTCCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-------CCCEEEEccCCCcchhhcccCC
Confidence 567889999999999999999998766789999999999999999987652 57999999987631 12458
Q ss_pred ccEEEecCcchhh----HHHHHHHhccCCeEEEEe
Q psy7834 286 YDVIYVGGAVHHY----PFKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 286 fD~i~s~~~~~~~----~~~~~~~L~pgG~l~~~~ 316 (492)
||+|+++....+. ..++.++|||||++++.+
T Consensus 144 ~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 144 VDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999988764432 457899999999999974
No 154
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.43 E-value=6.7e-13 Score=126.08 Aligned_cols=86 Identities=16% Similarity=0.265 Sum_probs=75.2
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVG-KTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPY 131 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 131 (492)
.++++.+|||+|||||.++..|++.++ +..+|+|||+|++|++.|++++...+.. .+++++++|+.++++ ++|
T Consensus 67 ~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~----~~v~~~~~D~~~~~~--~~~ 140 (261)
T 4gek_A 67 FVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAP----TPVDVIEGDIRDIAI--ENA 140 (261)
T ss_dssp HCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCS----SCEEEEESCTTTCCC--CSE
T ss_pred hCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccC----ceEEEeecccccccc--ccc
Confidence 578999999999999999999999863 4469999999999999999999887763 689999999998875 469
Q ss_pred cceeccCcccccc
Q psy7834 132 DIIHVGGSIEDIP 144 (492)
Q Consensus 132 D~i~~~~~~~~l~ 144 (492)
|+|+++.+++.+.
T Consensus 141 d~v~~~~~l~~~~ 153 (261)
T 4gek_A 141 SMVVLNFTLQFLE 153 (261)
T ss_dssp EEEEEESCGGGSC
T ss_pred ccceeeeeeeecC
Confidence 9999998887654
No 155
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.43 E-value=5.8e-13 Score=124.63 Aligned_cols=105 Identities=17% Similarity=0.277 Sum_probs=84.9
Q ss_pred HHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCC
Q psy7834 199 AQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGRE 278 (492)
Q Consensus 199 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 278 (492)
..+.+.+...+.++.+|||+|||+|.++..+++.. + +|+|+|+|+.|++.|+++. ++++++++|+.+
T Consensus 28 ~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~--~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~~ 94 (239)
T 3bxo_A 28 SDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEF-G--DTAGLELSEDMLTHARKRL----------PDATLHQGDMRD 94 (239)
T ss_dssp HHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHH-S--EEEEEESCHHHHHHHHHHC----------TTCEEEECCTTT
T ss_pred HHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhC-C--cEEEEeCCHHHHHHHHHhC----------CCCEEEECCHHH
Confidence 34455555545678899999999999999999986 3 7999999999999998874 257999999977
Q ss_pred CCcCCCCccEEEe-cCcchhhH---------HHHHHHhccCCeEEEEeC
Q psy7834 279 GHAAEGPYDVIYV-GGAVHHYP---------FKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 279 ~~~~~~~fD~i~s-~~~~~~~~---------~~~~~~L~pgG~l~~~~~ 317 (492)
.+. .++||+|++ ..++++++ .++.++|||||++++...
T Consensus 95 ~~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 95 FRL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp CCC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred ccc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 554 678999995 44777762 278899999999999753
No 156
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.43 E-value=3.3e-13 Score=128.37 Aligned_cols=105 Identities=22% Similarity=0.352 Sum_probs=83.6
Q ss_pred HHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC
Q psy7834 200 QALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG 279 (492)
Q Consensus 200 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 279 (492)
.+.+.+...++++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++.. .+ ++++|+.+.
T Consensus 43 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~---------~~--~~~~d~~~~ 108 (260)
T 2avn_A 43 LIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQERG---FEVVLVDPSKEMLEVAREKGV---------KN--VVEAKAEDL 108 (260)
T ss_dssp HHHHHHHHHCCSCCEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHHTC---------SC--EEECCTTSC
T ss_pred HHHHHHHHhcCCCCeEEEeCCCcCHHHHHHHHcC---CeEEEEeCCHHHHHHHHhhcC---------CC--EEECcHHHC
Confidence 3444454445678899999999999999998763 479999999999999988743 12 888998877
Q ss_pred CcCCCCccEEEecCcchhh-H------HHHHHHhccCCeEEEEeCC
Q psy7834 280 HAAEGPYDVIYVGGAVHHY-P------FKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 280 ~~~~~~fD~i~s~~~~~~~-~------~~~~~~L~pgG~l~~~~~~ 318 (492)
+.++++||+|++...+.++ + .++.++|||||++++.+..
T Consensus 109 ~~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 109 PFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp CSCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CCCCCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 6667899999998765544 2 4889999999999997654
No 157
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.43 E-value=5.2e-13 Score=120.56 Aligned_cols=97 Identities=21% Similarity=0.310 Sum_probs=81.5
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
++++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++.. +++++++|+.+.+.++++||+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~----------~~~~~~~d~~~~~~~~~~~D~ 110 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDFP----------EARWVVGDLSVDQISETDFDL 110 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCT----------TSEEEECCTTTSCCCCCCEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhCC----------CCcEEEcccccCCCCCCceeE
Confidence 678899999999999999999987 3489999999999999998752 478999999876556678999
Q ss_pred EEec-CcchhhH--------HHHHHHhccCCeEEEEeCC
Q psy7834 289 IYVG-GAVHHYP--------FKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 289 i~s~-~~~~~~~--------~~~~~~L~pgG~l~~~~~~ 318 (492)
|+++ ..+++++ .++.++|+|||++++..+.
T Consensus 111 i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~ 149 (195)
T 3cgg_A 111 IVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGA 149 (195)
T ss_dssp EEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred EEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 9998 5666652 3788999999999997654
No 158
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.43 E-value=2.1e-13 Score=126.08 Aligned_cols=113 Identities=14% Similarity=0.100 Sum_probs=82.5
Q ss_pred HHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC
Q psy7834 200 QALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG 279 (492)
Q Consensus 200 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 279 (492)
..++.+. +.++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.+.+++++... ....++++++++|+.+.
T Consensus 18 ~~~~~l~--~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~-~~~~~~v~~~~~d~~~l 93 (218)
T 3mq2_A 18 AEFEQLR--SQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPA-KGGLPNLLYLWATAERL 93 (218)
T ss_dssp HHHHHHH--TTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGG-GTCCTTEEEEECCSTTC
T ss_pred HHHHHhh--ccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhh-hcCCCceEEEecchhhC
Confidence 4455554 6788999999999999999999985 678999999999999864433322100 01345899999999887
Q ss_pred CcCCCCccEEEecCcc---h--hh------HHHHHHHhccCCeEEEEeC
Q psy7834 280 HAAEGPYDVIYVGGAV---H--HY------PFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 280 ~~~~~~fD~i~s~~~~---~--~~------~~~~~~~L~pgG~l~~~~~ 317 (492)
+..+++ |.|+..... + ++ ..++.++|||||++++.++
T Consensus 94 ~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 94 PPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp CSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 665555 777644322 1 33 3489999999999999664
No 159
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.43 E-value=3.1e-13 Score=128.49 Aligned_cols=106 Identities=12% Similarity=0.194 Sum_probs=84.9
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh---hCCCCCCCCcEEEEEccCCCCC-----
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHT---YYPNLMEGGRVQFVDGDGREGH----- 280 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~---~~~~~~~~~~v~~~~~d~~~~~----- 280 (492)
..++.+|||+|||+|.++..++++. +..+|+|+|+++.|++.|++|+.. ++ ...+++++++|+.+..
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~----l~~~v~~~~~D~~~~~~~~~~ 108 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAA----FSARIEVLEADVTLRAKARVE 108 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTT----TGGGEEEEECCTTCCHHHHHH
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCC----CcceEEEEeCCHHHHhhhhhh
Confidence 4567899999999999999999986 667999999999999999999876 43 1236999999997652
Q ss_pred --cCCCCccEEEecCcch------------------------hhHHHHHHHhccCCeEEEEeCCC
Q psy7834 281 --AAEGPYDVIYVGGAVH------------------------HYPFKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 281 --~~~~~fD~i~s~~~~~------------------------~~~~~~~~~L~pgG~l~~~~~~~ 319 (492)
...++||+|+++..+. .+...+.++|||||++++..+..
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 173 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ 173 (260)
T ss_dssp TTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred hccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH
Confidence 2457899999984332 22347789999999999977654
No 160
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.43 E-value=2.8e-13 Score=128.42 Aligned_cols=110 Identities=26% Similarity=0.356 Sum_probs=88.7
Q ss_pred HHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccC
Q psy7834 197 VHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDG 276 (492)
Q Consensus 197 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~ 276 (492)
....+++.+...+.++.+|||+|||+|.++..+++.. + +|+|+|+|+.+++.|++|+..++ .. +++.++|+
T Consensus 106 tt~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g-~--~v~gvDi~~~~v~~a~~n~~~~~-----~~-v~~~~~d~ 176 (254)
T 2nxc_A 106 TTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLG-G--KALGVDIDPMVLPQAEANAKRNG-----VR-PRFLEGSL 176 (254)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTT-C--EEEEEESCGGGHHHHHHHHHHTT-----CC-CEEEESCH
T ss_pred HHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhC-C--eEEEEECCHHHHHHHHHHHHHcC-----Cc-EEEEECCh
Confidence 3455566665557788999999999999999998864 4 89999999999999999998754 22 88999997
Q ss_pred CCCCcCCCCccEEEecCcchhhH---HHHHHHhccCCeEEEEe
Q psy7834 277 REGHAAEGPYDVIYVGGAVHHYP---FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 277 ~~~~~~~~~fD~i~s~~~~~~~~---~~~~~~L~pgG~l~~~~ 316 (492)
... .+.++||+|+++...+++. .++.+.|||||+++++.
T Consensus 177 ~~~-~~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 177 EAA-LPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp HHH-GGGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhc-CcCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 653 3456899999987665544 48899999999999964
No 161
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.43 E-value=3.4e-13 Score=128.24 Aligned_cols=106 Identities=19% Similarity=0.210 Sum_probs=85.4
Q ss_pred cC-CCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc--CCCC
Q psy7834 209 LK-PGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA--AEGP 285 (492)
Q Consensus 209 ~~-~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~ 285 (492)
+. ++.+|||+|||+|.++..++++. + ++|+|+|+++.+++.|++++..++ ...+++++++|+.+... ..++
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~-~-~~v~gvDi~~~~~~~a~~n~~~~~----~~~~v~~~~~D~~~~~~~~~~~~ 119 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRT-K-AKIVGVEIQERLADMAKRSVAYNQ----LEDQIEIIEYDLKKITDLIPKER 119 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTC-C-CEEEEECCSHHHHHHHHHHHHHTT----CTTTEEEECSCGGGGGGTSCTTC
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhc-C-CcEEEEECCHHHHHHHHHHHHHCC----CcccEEEEECcHHHhhhhhccCC
Confidence 55 78999999999999999999885 3 389999999999999999998764 23479999999976542 3678
Q ss_pred ccEEEecCcchh--------------------------hHHHHHHHhccCCeEEEEeCCCc
Q psy7834 286 YDVIYVGGAVHH--------------------------YPFKLMDQLKPGGVMWFTIGNAE 320 (492)
Q Consensus 286 fD~i~s~~~~~~--------------------------~~~~~~~~L~pgG~l~~~~~~~~ 320 (492)
||+|+++..+.. +...+.++|||||++++..++..
T Consensus 120 fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 180 (259)
T 3lpm_A 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPER 180 (259)
T ss_dssp EEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTT
T ss_pred ccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHH
Confidence 999999855421 33478899999999999765543
No 162
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.43 E-value=2.2e-13 Score=127.38 Aligned_cols=103 Identities=23% Similarity=0.361 Sum_probs=83.3
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC----cCC-
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH----AAE- 283 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~----~~~- 283 (492)
..++.+|||+|||+|+.+..+++..++.++|+++|+|+.+++.|++++...+ ...+++++.+|+.+.. ..+
T Consensus 70 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g----~~~~i~~~~~d~~~~l~~l~~~~~ 145 (232)
T 3cbg_A 70 LTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG----VAEKISLRLGPALATLEQLTQGKP 145 (232)
T ss_dssp HHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT----CGGGEEEEESCHHHHHHHHHTSSS
T ss_pred hcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEEcCHHHHHHHHHhcCC
Confidence 3467899999999999999999987557899999999999999999988764 2246999999975421 112
Q ss_pred -CCccEEEecCcchhhH---HHHHHHhccCCeEEEE
Q psy7834 284 -GPYDVIYVGGAVHHYP---FKLMDQLKPGGVMWFT 315 (492)
Q Consensus 284 -~~fD~i~s~~~~~~~~---~~~~~~L~pgG~l~~~ 315 (492)
++||+|++........ +++.++|+|||++++.
T Consensus 146 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp CCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 6899999987654433 5889999999999985
No 163
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.43 E-value=9.6e-14 Score=132.35 Aligned_cols=106 Identities=19% Similarity=0.131 Sum_probs=78.5
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCC------------C-----------
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLM------------E----------- 265 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~------------~----------- 265 (492)
..++.+|||||||+|.++..++... ..+|+|+|+|+.|++.|+++++.....+. +
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 3567899999999998887766543 23799999999999999988754210000 0
Q ss_pred -CCcEE-EEEccCCCC-Cc---CCCCccEEEecCcchhh----H------HHHHHHhccCCeEEEEe
Q psy7834 266 -GGRVQ-FVDGDGREG-HA---AEGPYDVIYVGGAVHHY----P------FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 266 -~~~v~-~~~~d~~~~-~~---~~~~fD~i~s~~~~~~~----~------~~~~~~L~pgG~l~~~~ 316 (492)
..++. ++++|+... +. ..++||+|+++.++|++ + .++.++|||||+|+++.
T Consensus 131 ~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 131 LRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 01244 889998763 21 24689999999999875 2 27889999999999975
No 164
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.43 E-value=1e-13 Score=122.80 Aligned_cols=99 Identities=14% Similarity=0.208 Sum_probs=83.1
Q ss_pred HHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC
Q psy7834 201 ALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH 280 (492)
Q Consensus 201 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 280 (492)
+++.+. +.++.+|||+|||+|.++..+++.. . +|+|+|+|+.+++.|+++. ++++++.+| .+
T Consensus 9 ~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~----------~~v~~~~~d---~~ 70 (170)
T 3i9f_A 9 YLPNIF--EGKKGVIVDYGCGNGFYCKYLLEFA-T--KLYCIDINVIALKEVKEKF----------DSVITLSDP---KE 70 (170)
T ss_dssp THHHHH--SSCCEEEEEETCTTCTTHHHHHTTE-E--EEEEECSCHHHHHHHHHHC----------TTSEEESSG---GG
T ss_pred HHHhcC--cCCCCeEEEECCCCCHHHHHHHhhc-C--eEEEEeCCHHHHHHHHHhC----------CCcEEEeCC---CC
Confidence 345554 6778899999999999999999876 2 8999999999999999871 368999999 34
Q ss_pred cCCCCccEEEecCcchhhH------HHHHHHhccCCeEEEEeC
Q psy7834 281 AAEGPYDVIYVGGAVHHYP------FKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 281 ~~~~~fD~i~s~~~~~~~~------~~~~~~L~pgG~l~~~~~ 317 (492)
.++++||+|+++.++++++ +++.++|||||++++...
T Consensus 71 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 71 IPDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDW 113 (170)
T ss_dssp SCTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 4567899999999998874 488999999999999753
No 165
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.43 E-value=5e-13 Score=127.94 Aligned_cols=104 Identities=21% Similarity=0.214 Sum_probs=88.5
Q ss_pred ccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCcc
Q psy7834 208 YLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYD 287 (492)
Q Consensus 208 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 287 (492)
.+.++.+|||+|||+|.++..+++.. +.++|+|+|+|+.|++.|++|++.++ ..++.++++|+.+. ...++||
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~-~~~~V~~vD~s~~av~~a~~n~~~n~-----l~~~~~~~~d~~~~-~~~~~~D 188 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYS-KPKLVYAIEKNPTAYHYLCENIKLNK-----LNNVIPILADNRDV-ELKDVAD 188 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHT-CCSEEEEEECCHHHHHHHHHHHHHTT-----CSSEEEEESCGGGC-CCTTCEE
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcC-----CCCEEEEECChHHc-CccCCce
Confidence 46788999999999999999999986 46789999999999999999998864 45789999999776 3356899
Q ss_pred EEEecCcc--hhhHHHHHHHhccCCeEEEEeCC
Q psy7834 288 VIYVGGAV--HHYPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 288 ~i~s~~~~--~~~~~~~~~~L~pgG~l~~~~~~ 318 (492)
+|+++... ..+..++.+.|+|||++++++..
T Consensus 189 ~Vi~d~p~~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 189 RVIMGYVHKTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp EEEECCCSSGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEECCcccHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 99998763 45556889999999999998753
No 166
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.43 E-value=2.5e-13 Score=128.76 Aligned_cols=99 Identities=15% Similarity=0.120 Sum_probs=76.3
Q ss_pred CCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC---CcC---CC
Q psy7834 211 PGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG---HAA---EG 284 (492)
Q Consensus 211 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~---~~ 284 (492)
++.+|||+|||+|.++..++++. +..+|+|+|+|+.|++.|++++..++ ...+++++++|+.+. +.. ++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNN----LSDLIKVVKVPQKTLLMDALKEESEI 139 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECCTTCSSTTTSTTCCSC
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcC----CCccEEEEEcchhhhhhhhhhcccCC
Confidence 57799999999999999999876 45789999999999999999998754 123599999997542 222 25
Q ss_pred CccEEEecCcchhhH---------------------HHHHHHhccCCeEEE
Q psy7834 285 PYDVIYVGGAVHHYP---------------------FKLMDQLKPGGVMWF 314 (492)
Q Consensus 285 ~fD~i~s~~~~~~~~---------------------~~~~~~L~pgG~l~~ 314 (492)
+||+|+++..+++.. .++.++|||||.+.+
T Consensus 140 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 140 IYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp CBSEEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred cccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 899999986544221 145678899998876
No 167
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.42 E-value=2.5e-13 Score=131.28 Aligned_cols=116 Identities=14% Similarity=0.101 Sum_probs=79.8
Q ss_pred HHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCC------------CC-
Q psy7834 199 AQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNL------------ME- 265 (492)
Q Consensus 199 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~------------~~- 265 (492)
..+.+.+.....++.+|||||||+|.++..++.. ...+|+|+|+|+.|++.|+++++.....+ .+
T Consensus 59 ~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~ 136 (289)
T 2g72_A 59 RCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACS--HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGK 136 (289)
T ss_dssp HHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGG--GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCS
T ss_pred HHHHHHhCCCCCCCCeEEEECCCcChHHHHhhcc--CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCc
Confidence 3444554322236789999999999955444433 24589999999999999998764310000 00
Q ss_pred ------------CCcEEEEEccCCC-CCc-----CCCCccEEEecCcchh----hHH------HHHHHhccCCeEEEEe
Q psy7834 266 ------------GGRVQFVDGDGRE-GHA-----AEGPYDVIYVGGAVHH----YPF------KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 266 ------------~~~v~~~~~d~~~-~~~-----~~~~fD~i~s~~~~~~----~~~------~~~~~L~pgG~l~~~~ 316 (492)
...++++.+|+.. .+. ++++||+|+++.++++ +++ ++.++|||||+|++..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 137 GECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp CCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 0015677889876 332 2456999999999998 543 7899999999999963
No 168
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.42 E-value=5.3e-14 Score=132.24 Aligned_cols=109 Identities=17% Similarity=0.116 Sum_probs=87.6
Q ss_pred HHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCC
Q psy7834 198 HAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGR 277 (492)
Q Consensus 198 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 277 (492)
...+...+.. ..++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|++++...+ ...+++++++|+.
T Consensus 66 ~~~l~~~~~~-~~~~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~~d~~ 137 (241)
T 3gdh_A 66 AEHIAGRVSQ-SFKCDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYG----IADKIEFICGDFL 137 (241)
T ss_dssp HHHHHHHHHH-HSCCSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT----CGGGEEEEESCHH
T ss_pred HHHHHHHhhh-ccCCCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcC----CCcCeEEEECChH
Confidence 3444444432 3478899999999999999999863 589999999999999999998753 1247999999987
Q ss_pred CCCcCCCCccEEEecCcchhhHH------HHHHHhccCCeEEEE
Q psy7834 278 EGHAAEGPYDVIYVGGAVHHYPF------KLMDQLKPGGVMWFT 315 (492)
Q Consensus 278 ~~~~~~~~fD~i~s~~~~~~~~~------~~~~~L~pgG~l~~~ 315 (492)
+.. .+++||+|+++..+++... ++.++|+|||.+++.
T Consensus 138 ~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 138 LLA-SFLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp HHG-GGCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred Hhc-ccCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 644 5678999999998887654 578899999997763
No 169
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.42 E-value=1.8e-13 Score=127.11 Aligned_cols=102 Identities=16% Similarity=0.020 Sum_probs=78.2
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCC-HHHHHHH---HHHHHhhCCCCCCCCcEEEEEccCCCCCcC-C
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHI-EDLVAQA---NKSMHTYYPNLMEGGRVQFVDGDGREGHAA-E 283 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s-~~~l~~a---~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 283 (492)
..++.+|||||||+|.++..++++. +..+|+|+|+| +.|++.| ++++... +..++.++++|+...+.. .
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~-----~~~~v~~~~~d~~~l~~~~~ 95 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKG-----GLSNVVFVIAAAESLPFELK 95 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGT-----CCSSEEEECCBTTBCCGGGT
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHc-----CCCCeEEEEcCHHHhhhhcc
Confidence 4678899999999999999999764 67899999999 7787776 6666554 345899999999876432 2
Q ss_pred CCccEEEecCcchh-----------hHHHHHHHhccCCeEEEEe
Q psy7834 284 GPYDVIYVGGAVHH-----------YPFKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 284 ~~fD~i~s~~~~~~-----------~~~~~~~~L~pgG~l~~~~ 316 (492)
..+|.|+++....+ +..++.++|||||++++..
T Consensus 96 d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 96 NIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp TCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred CeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 45677776654322 2358899999999999943
No 170
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.42 E-value=4.1e-13 Score=125.06 Aligned_cols=103 Identities=20% Similarity=0.280 Sum_probs=83.9
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcC---C--
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAA---E-- 283 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~-- 283 (492)
..++.+|||+|||+|..+..+++..++.++|+++|+|+.+++.|++++..++ ...+++++++|+.+.... .
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g----~~~~i~~~~~d~~~~~~~~~~~~~ 142 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE----AEHKIDLRLKPALETLDELLAAGE 142 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT----CTTTEEEEESCHHHHHHHHHHTTC
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC----CCCeEEEEEcCHHHHHHHHHhcCC
Confidence 4567899999999999999999887547899999999999999999998764 235799999997543211 1
Q ss_pred -CCccEEEecCcchh---hHHHHHHHhccCCeEEEE
Q psy7834 284 -GPYDVIYVGGAVHH---YPFKLMDQLKPGGVMWFT 315 (492)
Q Consensus 284 -~~fD~i~s~~~~~~---~~~~~~~~L~pgG~l~~~ 315 (492)
++||+|+++..... +.+++.+.|+|||++++.
T Consensus 143 ~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 143 AGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp TTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 68999999876543 345889999999999984
No 171
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.41 E-value=9.2e-13 Score=124.48 Aligned_cols=99 Identities=22% Similarity=0.301 Sum_probs=79.7
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEE
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVI 289 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i 289 (492)
.++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|++++...+ .+++++++|+.+.+. .++||+|
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~------~~v~~~~~d~~~~~~-~~~fD~v 109 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERG---YEVVGLDLHEEMLRVARRKAKERN------LKIEFLQGDVLEIAF-KNEFDAV 109 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT------CCCEEEESCGGGCCC-CSCEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHhcC------CceEEEECChhhccc-CCCccEE
Confidence 467899999999999999999863 479999999999999999987643 368999999977543 3689999
Q ss_pred EecCc-chhh--------HHHHHHHhccCCeEEEEeCC
Q psy7834 290 YVGGA-VHHY--------PFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 290 ~s~~~-~~~~--------~~~~~~~L~pgG~l~~~~~~ 318 (492)
++... ++++ ..++.++|||||.+++.++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 110 TMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp EECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 97643 3322 13788999999999987643
No 172
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.41 E-value=2.8e-12 Score=138.00 Aligned_cols=118 Identities=17% Similarity=0.173 Sum_probs=85.4
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHh-----------------------------------------
Q psy7834 195 PKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMV----------------------------------------- 233 (492)
Q Consensus 195 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~----------------------------------------- 233 (492)
+.+.+.++.... ..++.+|||.+||||.+++.+|...
T Consensus 176 e~LAa~ll~~~~--~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~ 253 (703)
T 3v97_A 176 ETLAAAIVMRSG--WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLA 253 (703)
T ss_dssp HHHHHHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhC--CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccc
Confidence 344444444433 4678899999999999999888763
Q ss_pred CCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcC--CCCccEEEecCcch-------hhH---H-
Q psy7834 234 GPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAA--EGPYDVIYVGGAVH-------HYP---F- 300 (492)
Q Consensus 234 ~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~fD~i~s~~~~~-------~~~---~- 300 (492)
.+..+|+|+|+++.|++.|+.|+..+|. ...++|.++|+.+...+ .++||+|++|..+. .+. .
T Consensus 254 ~~~~~i~G~Did~~av~~A~~N~~~agv----~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~ 329 (703)
T 3v97_A 254 EYSSHFYGSDSDARVIQRARTNARLAGI----GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSL 329 (703)
T ss_dssp HCCCCEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHH
T ss_pred cCCccEEEEECCHHHHHHHHHHHHHcCC----CCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHH
Confidence 1235799999999999999999998752 23599999999765333 33899999996542 111 1
Q ss_pred --HHHHHhccCCeEEEEeCC
Q psy7834 301 --KLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 301 --~~~~~L~pgG~l~~~~~~ 318 (492)
++.+.+.|||++++.++.
T Consensus 330 l~~~lk~~~~g~~~~ilt~~ 349 (703)
T 3v97_A 330 LGRIMKNQFGGWNLSLFSAS 349 (703)
T ss_dssp HHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHhhCCCCeEEEEeCC
Confidence 444556689999996553
No 173
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.39 E-value=1.7e-12 Score=129.68 Aligned_cols=100 Identities=10% Similarity=0.153 Sum_probs=84.3
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC--cCCCCcc
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH--AAEGPYD 287 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD 287 (492)
.++.+|||||||+|.++..+++.. |..+++++|+ +.|++.|++++...+ ..++++++.+|+.+.. .+ ++||
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~p-~~~D 250 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLS----GSERIHGHGANLLDRDVPFP-TGFD 250 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCT----TGGGEEEEECCCCSSSCCCC-CCCS
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcC----cccceEEEEccccccCCCCC-CCcC
Confidence 456799999999999999999986 7789999999 999999999987643 2257999999997642 33 6899
Q ss_pred EEEecCcchhhHH--------HHHHHhccCCeEEEEe
Q psy7834 288 VIYVGGAVHHYPF--------KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 288 ~i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~ 316 (492)
+|++..++|++++ ++.++|||||++++..
T Consensus 251 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 251 AVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp EEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999999987653 6789999999999864
No 174
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.38 E-value=1.6e-12 Score=128.42 Aligned_cols=99 Identities=23% Similarity=0.270 Sum_probs=80.6
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||||||+|.++..+++.. ..+|+|+|+|+ |++.|+++++.++ ..++++++++|+.+...+.++||+
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g--~~~v~gvD~s~-~~~~a~~~~~~~~----~~~~i~~~~~d~~~~~~~~~~~D~ 134 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAG--AKKVLGVDQSE-ILYQAMDIIRLNK----LEDTITLIKGKIEEVHLPVEKVDV 134 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEESST-HHHHHHHHHHHTT----CTTTEEEEESCTTTSCCSCSCEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcC--CCEEEEEChHH-HHHHHHHHHHHcC----CCCcEEEEEeeHHHhcCCCCcEEE
Confidence 5678899999999999999999873 45899999996 9999999988764 235899999999876666679999
Q ss_pred EEecCc---chh------hHHHHHHHhccCCeEEE
Q psy7834 289 IYVGGA---VHH------YPFKLMDQLKPGGVMWF 314 (492)
Q Consensus 289 i~s~~~---~~~------~~~~~~~~L~pgG~l~~ 314 (492)
|+++.. +.+ +..++.++|||||+++.
T Consensus 135 Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 135 IISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp EEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred EEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 998762 322 22367899999999973
No 175
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.38 E-value=5.9e-13 Score=127.59 Aligned_cols=104 Identities=17% Similarity=0.174 Sum_probs=84.7
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc----CCC
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA----AEG 284 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~ 284 (492)
+.+|.+|||+|||+|..+..+++.....++|+|+|+|+.+++.+++++++.+ ..+++++++|+..... ..+
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g-----~~~v~~~~~D~~~~~~~~~~~~~ 155 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG-----VLNTIIINADMRKYKDYLLKNEI 155 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEESCHHHHHHHHHHTTC
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC-----CCcEEEEeCChHhcchhhhhccc
Confidence 6788999999999999999999987445899999999999999999998864 3589999999865433 256
Q ss_pred CccEEEecCcc------------------------hhhHHHHHHHhccCCeEEEEeC
Q psy7834 285 PYDVIYVGGAV------------------------HHYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 285 ~fD~i~s~~~~------------------------~~~~~~~~~~L~pgG~l~~~~~ 317 (492)
+||+|+++... ..+.+++.+.|||||++++++.
T Consensus 156 ~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 156 FFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp CEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred cCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 89999987322 1233477889999999999754
No 176
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.38 E-value=1.1e-12 Score=130.10 Aligned_cols=99 Identities=23% Similarity=0.200 Sum_probs=81.1
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||+|||+|.++..+++. +..+|+|+|+| +|++.|+++++.++ ...+++++++|+.+...+.++||+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s-~~l~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~fD~ 136 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECS-SISDYAVKIVKANK----LDHVVTIIKGKVEEVELPVEKVDI 136 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECS-THHHHHHHHHHHTT----CTTTEEEEESCTTTCCCSSSCEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcH-HHHHHHHHHHHHcC----CCCcEEEEECcHHHccCCCCceEE
Confidence 457889999999999999999987 34689999999 59999999998764 234599999999887666789999
Q ss_pred EEecCcchh---------hHHHHHHHhccCCeEEE
Q psy7834 289 IYVGGAVHH---------YPFKLMDQLKPGGVMWF 314 (492)
Q Consensus 289 i~s~~~~~~---------~~~~~~~~L~pgG~l~~ 314 (492)
|+++...+. +..++.++|||||+++.
T Consensus 137 Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 137 IISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp EEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 999764322 22366899999999985
No 177
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.38 E-value=5.1e-13 Score=127.11 Aligned_cols=106 Identities=18% Similarity=0.201 Sum_probs=81.3
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCC------------CC------------
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNL------------ME------------ 265 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~------------~~------------ 265 (492)
.++.+|||+|||+|.++..+++.. . .+|+|+|+|+.|++.|++++...+..+ .+
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACES-F-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGT-E-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcc-c-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 467899999999999999988764 2 589999999999999999876421000 00
Q ss_pred CCcE-EEEEccCCCCCc-CC---CCccEEEecCcch----hhH------HHHHHHhccCCeEEEEeC
Q psy7834 266 GGRV-QFVDGDGREGHA-AE---GPYDVIYVGGAVH----HYP------FKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 266 ~~~v-~~~~~d~~~~~~-~~---~~fD~i~s~~~~~----~~~------~~~~~~L~pgG~l~~~~~ 317 (492)
..++ +++++|+.+... .. ++||+|++..+++ +++ .++.++|||||+|++...
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 0027 899999876533 34 7899999999988 533 378899999999999763
No 178
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.37 E-value=3.5e-13 Score=127.61 Aligned_cols=84 Identities=18% Similarity=0.209 Sum_probs=70.9
Q ss_pred HHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC
Q psy7834 46 VLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY 125 (492)
Q Consensus 46 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 125 (492)
++++|......+.+|||||||||.++..|++.+ .+|+|+|+|+.|++.|+++ ++++++++|+++++
T Consensus 29 l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~~-----------~~v~~~~~~~e~~~ 94 (257)
T 4hg2_A 29 LFRWLGEVAPARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALRH-----------PRVTYAVAPAEDTG 94 (257)
T ss_dssp HHHHHHHHSSCSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCCC-----------TTEEEEECCTTCCC
T ss_pred HHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhhc-----------CCceeehhhhhhhc
Confidence 344443344556799999999999999999986 7999999999999887642 58999999999999
Q ss_pred CCCCcccceeccCccccc
Q psy7834 126 LDEAPYDIIHVGGSIEDI 143 (492)
Q Consensus 126 ~~~~~~D~i~~~~~~~~l 143 (492)
+++++||+|++..+++.+
T Consensus 95 ~~~~sfD~v~~~~~~h~~ 112 (257)
T 4hg2_A 95 LPPASVDVAIAAQAMHWF 112 (257)
T ss_dssp CCSSCEEEEEECSCCTTC
T ss_pred ccCCcccEEEEeeehhHh
Confidence 999999999999988744
No 179
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.37 E-value=3.4e-12 Score=125.98 Aligned_cols=100 Identities=20% Similarity=0.319 Sum_probs=84.3
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEE
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVI 289 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i 289 (492)
.++.+|||+|||+|.++..+++.. +..+++++|+| .+++.|++++...+ ...+++++.+|+.+.+.+. .||+|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~-~~D~v 236 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQG----VASRYHTIAGSAFEVDYGN-DYDLV 236 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHT----CGGGEEEEESCTTTSCCCS-CEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcC----CCcceEEEecccccCCCCC-CCcEE
Confidence 667899999999999999999986 67799999999 99999999987753 1246999999997654333 49999
Q ss_pred EecCcchhhHH--------HHHHHhccCCeEEEEe
Q psy7834 290 YVGGAVHHYPF--------KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 290 ~s~~~~~~~~~--------~~~~~L~pgG~l~~~~ 316 (492)
++..++|++++ ++.++|+|||++++..
T Consensus 237 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 237 LLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 99999988742 7889999999998864
No 180
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.37 E-value=1.5e-12 Score=125.62 Aligned_cols=107 Identities=20% Similarity=0.201 Sum_probs=81.3
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc-CCCCccE
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA-AEGPYDV 288 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~ 288 (492)
+++.+|||||||+|.++..+++.. +..+|+++|+|+.|++.|++++...+......++++++.+|+.+... ..++||+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 557899999999999999999874 56789999999999999999987542111124589999999876432 3578999
Q ss_pred EEecCcchh----------hHHHHHHHhccCCeEEEEeC
Q psy7834 289 IYVGGAVHH----------YPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 289 i~s~~~~~~----------~~~~~~~~L~pgG~l~~~~~ 317 (492)
|+++...+. +-.++.++|+|||++++..+
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 999765432 33488999999999999753
No 181
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.37 E-value=3.1e-12 Score=126.14 Aligned_cols=99 Identities=17% Similarity=0.181 Sum_probs=84.2
Q ss_pred CCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEEE
Q psy7834 211 PGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIY 290 (492)
Q Consensus 211 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 290 (492)
++.+|||||||+|.++..+++.. |..+++++|+ +.+++.|++++...+ ..++++|+.+|+.+ +.+. +||+|+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~-~~p~-~~D~v~ 240 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTG----LSGRAQVVVGSFFD-PLPA-GAGGYV 240 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTT----CTTTEEEEECCTTS-CCCC-SCSEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcC----cCcCeEEecCCCCC-CCCC-CCcEEE
Confidence 46799999999999999999987 7789999999 999999999988753 23579999999974 3333 899999
Q ss_pred ecCcchhhHH--------HHHHHhccCCeEEEEeC
Q psy7834 291 VGGAVHHYPF--------KLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 291 s~~~~~~~~~--------~~~~~L~pgG~l~~~~~ 317 (492)
+..++|++++ ++.++|+|||+|++...
T Consensus 241 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 241 LSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred EehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 9999988765 67899999999998653
No 182
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.36 E-value=1.1e-12 Score=123.49 Aligned_cols=101 Identities=23% Similarity=0.334 Sum_probs=77.9
Q ss_pred CceEEEeccc--cHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc----C--CC
Q psy7834 213 AKVLDIGSGS--GYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA----A--EG 284 (492)
Q Consensus 213 ~~vLDiGcG~--G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~--~~ 284 (492)
.+|||||||+ +..+..++++..|.++|+++|.|+.|++.|++++... ...+++|+++|+.+... + .+
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~-----~~~~~~~v~aD~~~~~~~l~~~~~~~ 154 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST-----PEGRTAYVEADMLDPASILDAPELRD 154 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC-----SSSEEEEEECCTTCHHHHHTCHHHHT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC-----CCCcEEEEEecccChhhhhccccccc
Confidence 6899999997 4445566665558899999999999999999988642 12479999999976410 1 24
Q ss_pred Ccc-----EEEecCcchhhHH---------HHHHHhccCCeEEEEeCC
Q psy7834 285 PYD-----VIYVGGAVHHYPF---------KLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 285 ~fD-----~i~s~~~~~~~~~---------~~~~~L~pgG~l~~~~~~ 318 (492)
.|| .|+++.++||+++ ++.+.|+|||+|+++...
T Consensus 155 ~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 155 TLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp TCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred ccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEecc
Confidence 566 5889999999875 567789999999998543
No 183
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.36 E-value=3.5e-12 Score=120.68 Aligned_cols=93 Identities=20% Similarity=0.211 Sum_probs=81.1
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
...+++.+ .+.++.+|||+|||+|.++..+++..+ .+|+|+|+|+.|++.|+++.+..++. .+++++++|+.
T Consensus 25 ~~~l~~~~--~~~~~~~VLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~----~~v~~~~~d~~ 96 (256)
T 1nkv_A 25 YATLGRVL--RMKPGTRILDLGSGSGEMLCTWARDHG--ITGTGIDMSSLFTAQAKRRAEELGVS----ERVHFIHNDAA 96 (256)
T ss_dssp HHHHHHHT--CCCTTCEEEEETCTTCHHHHHHHHHTC--CEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCCT
T ss_pred HHHHHHhc--CCCCCCEEEEECCCCCHHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHhcCCC----cceEEEECChH
Confidence 45666666 678899999999999999999999874 69999999999999999999888873 58999999999
Q ss_pred CCCCCCCcccceeccCcccccc
Q psy7834 123 KGYLDEAPYDIIHVGGSIEDIP 144 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~~~~~~l~ 144 (492)
++++ +++||+|++..+++++.
T Consensus 97 ~~~~-~~~fD~V~~~~~~~~~~ 117 (256)
T 1nkv_A 97 GYVA-NEKCDVAACVGATWIAG 117 (256)
T ss_dssp TCCC-SSCEEEEEEESCGGGTS
T ss_pred hCCc-CCCCCEEEECCChHhcC
Confidence 9877 78999999988876554
No 184
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.36 E-value=2.7e-12 Score=113.84 Aligned_cols=104 Identities=13% Similarity=0.125 Sum_probs=79.6
Q ss_pred cChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE
Q psy7834 193 SSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV 272 (492)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~ 272 (492)
++|.. ..+++.+.....++.+|||+|||+|.++..++++. +|+|+|+|+.|++. . .+++++
T Consensus 6 P~~~~-~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~------~--------~~~~~~ 66 (170)
T 3q87_B 6 PGEDT-YTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES------H--------RGGNLV 66 (170)
T ss_dssp CCHHH-HHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT------C--------SSSCEE
T ss_pred cCccH-HHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc------c--------cCCeEE
Confidence 44433 44555554222567899999999999999998764 79999999999987 1 257899
Q ss_pred EccCCCCCcCCCCccEEEecCcchh---------------hHHHHHHHhccCCeEEEEeC
Q psy7834 273 DGDGREGHAAEGPYDVIYVGGAVHH---------------YPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 273 ~~d~~~~~~~~~~fD~i~s~~~~~~---------------~~~~~~~~L~pgG~l~~~~~ 317 (492)
++|+.+ +..+++||+|+++..+++ +..++.+.| |||++++...
T Consensus 67 ~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~ 124 (170)
T 3q87_B 67 RADLLC-SINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVI 124 (170)
T ss_dssp ECSTTT-TBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEE
T ss_pred ECChhh-hcccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEe
Confidence 999976 444578999999988764 224777888 9999999763
No 185
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.36 E-value=2.1e-12 Score=122.00 Aligned_cols=100 Identities=20% Similarity=0.145 Sum_probs=77.1
Q ss_pred CCCceEEEeccccHHHHHHHHH--hCCCCeEEEEeCCHHHHHHHHHHHHhh---CCCCCCCCc-----------------
Q psy7834 211 PGAKVLDIGSGSGYLTACMAHM--VGPTGKVYAVEHIEDLVAQANKSMHTY---YPNLMEGGR----------------- 268 (492)
Q Consensus 211 ~~~~vLDiGcG~G~~~~~la~~--~~~~~~v~giD~s~~~l~~a~~~~~~~---~~~~~~~~~----------------- 268 (492)
++.+|||+|||+|.++..+++. . +..+|+|+|+|+.|++.|++++... +. ..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~-~~~~v~gvDis~~~l~~A~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 125 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRR-SLRQVIASDVDPAPLELAAKNLALLSPAGL----TARELERREQSERFGKPSYL 125 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGG-GEEEEEEEESCHHHHHHHHHHHHTTSHHHH----HHHHHHHHHHHHHHCCHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhcc-CCCeEEEEECCHHHHHHHHHHHHHhhhccc----cccchhhhhhhhhcccccch
Confidence 5679999999999999999987 4 4568999999999999999887653 10 001
Q ss_pred --------EE-------------EEEccCCCCCc-----CCCCccEEEecCcch---------------hhHHHHHHHhc
Q psy7834 269 --------VQ-------------FVDGDGREGHA-----AEGPYDVIYVGGAVH---------------HYPFKLMDQLK 307 (492)
Q Consensus 269 --------v~-------------~~~~d~~~~~~-----~~~~fD~i~s~~~~~---------------~~~~~~~~~L~ 307 (492)
++ ++++|+.+... ..++||+|+++..+. .+..++.++|+
T Consensus 126 ~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 205 (250)
T 1o9g_A 126 EAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALP 205 (250)
T ss_dssp HHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSC
T ss_pred hhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcC
Confidence 55 99999876432 334899999986432 23347889999
Q ss_pred cCCeEEEE
Q psy7834 308 PGGVMWFT 315 (492)
Q Consensus 308 pgG~l~~~ 315 (492)
|||++++.
T Consensus 206 pgG~l~~~ 213 (250)
T 1o9g_A 206 AHAVIAVT 213 (250)
T ss_dssp TTCEEEEE
T ss_pred CCcEEEEe
Confidence 99999983
No 186
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.35 E-value=1.4e-12 Score=129.29 Aligned_cols=108 Identities=19% Similarity=0.253 Sum_probs=85.8
Q ss_pred HHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCC
Q psy7834 199 AQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGRE 278 (492)
Q Consensus 199 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 278 (492)
..+++.+. ..++.+|||+|||+|.++..+++.. +..+|+++|+|+.|++.|++++..++ .+++++.+|...
T Consensus 186 ~~ll~~l~--~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~------~~~~~~~~d~~~ 256 (343)
T 2pjd_A 186 QLLLSTLT--PHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANG------VEGEVFASNVFS 256 (343)
T ss_dssp HHHHHHSC--TTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTT------CCCEEEECSTTT
T ss_pred HHHHHhcC--cCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhC------CCCEEEEccccc
Confidence 44454442 2356799999999999999999885 66799999999999999999998754 235778999865
Q ss_pred CCcCCCCccEEEecCcchh-----h------HHHHHHHhccCCeEEEEeC
Q psy7834 279 GHAAEGPYDVIYVGGAVHH-----Y------PFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 279 ~~~~~~~fD~i~s~~~~~~-----~------~~~~~~~L~pgG~l~~~~~ 317 (492)
.. +++||+|+++..+|+ . ..++.++|||||++++...
T Consensus 257 ~~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 257 EV--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp TC--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cc--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 32 568999999988864 1 2378899999999999753
No 187
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.35 E-value=1.1e-12 Score=120.02 Aligned_cols=93 Identities=15% Similarity=0.021 Sum_probs=72.4
Q ss_pred HHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCC-------CccccCceEEEe
Q psy7834 46 VLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNP-------EFVKDGRIKFVL 118 (492)
Q Consensus 46 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~-------~~~~~~~v~~~~ 118 (492)
.++.+ .+.++.+|||+|||+|..+..|++.. .+|+|||+|+.|++.|+++...... ......++++++
T Consensus 14 ~~~~l--~~~~~~~vLD~GCG~G~~~~~la~~g---~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 88 (203)
T 1pjz_A 14 YWSSL--NVVPGARVLVPLCGKSQDMSWLSGQG---YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWC 88 (203)
T ss_dssp HHHHH--CCCTTCEEEETTTCCSHHHHHHHHHC---CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEE
T ss_pred HHHhc--ccCCCCEEEEeCCCCcHhHHHHHHCC---CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEE
Confidence 34444 56688999999999999999999984 7999999999999999987642100 000015799999
Q ss_pred cCCCCCCCCC-CcccceeccCccccc
Q psy7834 119 GDGRKGYLDE-APYDIIHVGGSIEDI 143 (492)
Q Consensus 119 ~d~~~~~~~~-~~~D~i~~~~~~~~l 143 (492)
+|+.++++.+ ++||+|++..+++.+
T Consensus 89 ~d~~~l~~~~~~~fD~v~~~~~l~~l 114 (203)
T 1pjz_A 89 GDFFALTARDIGHCAAFYDRAAMIAL 114 (203)
T ss_dssp ECCSSSTHHHHHSEEEEEEESCGGGS
T ss_pred CccccCCcccCCCEEEEEECcchhhC
Confidence 9999988765 799999987777554
No 188
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.35 E-value=2.9e-12 Score=121.98 Aligned_cols=105 Identities=18% Similarity=0.306 Sum_probs=77.6
Q ss_pred CCCceEEEeccccH----HHHHHHHHhCC---CCeEEEEeCCHHHHHHHHHHHHhh----C-------------CCC-CC
Q psy7834 211 PGAKVLDIGSGSGY----LTACMAHMVGP---TGKVYAVEHIEDLVAQANKSMHTY----Y-------------PNL-ME 265 (492)
Q Consensus 211 ~~~~vLDiGcG~G~----~~~~la~~~~~---~~~v~giD~s~~~l~~a~~~~~~~----~-------------~~~-~~ 265 (492)
++.+|||+|||||. ++..|++..+. ..+|+|+|+|+.|++.|+++.-.. + ... .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 56667776532 348999999999999999874100 0 000 00
Q ss_pred --------CCcEEEEEccCCCCCcC-CCCccEEEecCcchhhHH--------HHHHHhccCCeEEEE
Q psy7834 266 --------GGRVQFVDGDGREGHAA-EGPYDVIYVGGAVHHYPF--------KLMDQLKPGGVMWFT 315 (492)
Q Consensus 266 --------~~~v~~~~~d~~~~~~~-~~~fD~i~s~~~~~~~~~--------~~~~~L~pgG~l~~~ 315 (492)
..+|.|.++|+.+.+.+ .++||+|+|..+++++.+ ++.+.|+|||.|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 03699999999774333 578999999998877653 678899999999984
No 189
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.35 E-value=4.7e-12 Score=126.71 Aligned_cols=100 Identities=20% Similarity=0.280 Sum_probs=84.9
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||||||+|.++..+++.. |..+++++|+ +.+++.|++++...+ ..++++++.+|+.+ +.+. .||+
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----l~~~v~~~~~d~~~-~~p~-~~D~ 271 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRG----LADRCEILPGDFFE-TIPD-GADV 271 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTT----CTTTEEEEECCTTT-CCCS-SCSE
T ss_pred CccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcC----cCCceEEeccCCCC-CCCC-CceE
Confidence 4567899999999999999999986 7789999999 999999999988753 23579999999974 3333 7999
Q ss_pred EEecCcchhhHH--------HHHHHhccCCeEEEEe
Q psy7834 289 IYVGGAVHHYPF--------KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 289 i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~ 316 (492)
|++..++|++++ ++.++|+|||++++..
T Consensus 272 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 272 YLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 999999987764 6789999999999854
No 190
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.35 E-value=2.7e-12 Score=121.92 Aligned_cols=92 Identities=18% Similarity=0.331 Sum_probs=81.3
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
..+++.+ ...++.+|||+|||+|.++..+++.. .+|+|+|+|++|++.|+++..+.++ ++++++++|+++
T Consensus 27 ~~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~-----~~v~~~~~d~~~ 96 (260)
T 1vl5_A 27 AKLMQIA--ALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGH-----QQVEYVQGDAEQ 96 (260)
T ss_dssp HHHHHHH--TCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEECCC-C
T ss_pred HHHHHHh--CCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCC-----CceEEEEecHHh
Confidence 5667777 67788999999999999999999986 6999999999999999999988776 689999999999
Q ss_pred CCCCCCcccceeccCccccccc
Q psy7834 124 GYLDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 124 ~~~~~~~~D~i~~~~~~~~l~~ 145 (492)
+++++++||+|++..+++++.+
T Consensus 97 l~~~~~~fD~V~~~~~l~~~~d 118 (260)
T 1vl5_A 97 MPFTDERFHIVTCRIAAHHFPN 118 (260)
T ss_dssp CCSCTTCEEEEEEESCGGGCSC
T ss_pred CCCCCCCEEEEEEhhhhHhcCC
Confidence 9988899999999988877654
No 191
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.35 E-value=3.4e-12 Score=125.55 Aligned_cols=99 Identities=19% Similarity=0.217 Sum_probs=79.8
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||+|||+|.++..+++.. ..+|+|+|+| .|++.|++++..++ ...+++++++|+.+...+.++||+
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~g--~~~v~~vD~s-~~~~~a~~~~~~~~----~~~~i~~~~~d~~~~~~~~~~~D~ 108 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKHG--AKHVIGVDMS-SIIEMAKELVELNG----FSDKITLLRGKLEDVHLPFPKVDI 108 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTC--CSEEEEEESS-THHHHHHHHHHHTT----CTTTEEEEESCTTTSCCSSSCEEE
T ss_pred hcCCCEEEEecCccHHHHHHHHHCC--CCEEEEEChH-HHHHHHHHHHHHcC----CCCCEEEEECchhhccCCCCcccE
Confidence 4568899999999999999999863 4589999999 69999999988764 235799999999876656678999
Q ss_pred EEecCcchh---------hHHHHHHHhccCCeEEE
Q psy7834 289 IYVGGAVHH---------YPFKLMDQLKPGGVMWF 314 (492)
Q Consensus 289 i~s~~~~~~---------~~~~~~~~L~pgG~l~~ 314 (492)
|++....+. +..++.++|||||+++.
T Consensus 109 Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 109 IISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp EEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 998754322 22366799999999974
No 192
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.35 E-value=1.7e-12 Score=120.06 Aligned_cols=98 Identities=21% Similarity=0.289 Sum_probs=79.4
Q ss_pred HHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc
Q psy7834 202 LEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA 281 (492)
Q Consensus 202 ~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 281 (492)
++.+.... ++.+|||+|||+|.++..+++. +|+|+|+.|++.|+++ +++++++|+...+.
T Consensus 39 ~~~l~~~~-~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~------------~~~~~~~d~~~~~~ 98 (219)
T 1vlm_A 39 LQAVKCLL-PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR------------GVFVLKGTAENLPL 98 (219)
T ss_dssp HHHHHHHC-CSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT------------TCEEEECBTTBCCS
T ss_pred HHHHHHhC-CCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc------------CCEEEEcccccCCC
Confidence 34444333 4889999999999999887542 8999999999998875 36899999877666
Q ss_pred CCCCccEEEecCcchhhH------HHHHHHhccCCeEEEEeCCC
Q psy7834 282 AEGPYDVIYVGGAVHHYP------FKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 282 ~~~~fD~i~s~~~~~~~~------~~~~~~L~pgG~l~~~~~~~ 319 (492)
.+++||+|++..++++++ .++.++|+|||++++.+...
T Consensus 99 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 99 KDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp CTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred CCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 677899999999988775 37889999999999976543
No 193
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.34 E-value=1.8e-12 Score=128.59 Aligned_cols=100 Identities=27% Similarity=0.282 Sum_probs=80.6
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
..++.+|||||||+|.++..+++.. ..+|+|+|+|+ |++.|+++++.++ ..++++++.+|+.+...+ ++||+
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g--~~~V~~vD~s~-~~~~a~~~~~~~~----l~~~v~~~~~d~~~~~~~-~~~D~ 119 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNN----LTDRIVVIPGKVEEVSLP-EQVDI 119 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-HHHHHHHHHHHTT----CTTTEEEEESCTTTCCCS-SCEEE
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCC--CCEEEEECCHH-HHHHHHHHHHHcC----CCCcEEEEEcchhhCCCC-CceeE
Confidence 4578899999999999999998863 45899999996 9999999988764 235799999999775433 68999
Q ss_pred EEecCcchhhH--------HHHHHHhccCCeEEEEe
Q psy7834 289 IYVGGAVHHYP--------FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 289 i~s~~~~~~~~--------~~~~~~L~pgG~l~~~~ 316 (492)
|++....+++. .++.+.|||||++++..
T Consensus 120 Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 120 IISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp EEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred EEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 99987765442 25578999999998753
No 194
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.34 E-value=4.7e-12 Score=116.82 Aligned_cols=96 Identities=27% Similarity=0.426 Sum_probs=84.4
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
...+++.+ .+.++.+|||+|||+|.++..+++..++..+|+|+|+|+.|++.|+++....++ .+++++++|+.
T Consensus 26 ~~~~~~~~--~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~d~~ 98 (219)
T 3dh0_A 26 PEKVLKEF--GLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL-----KNVEVLKSEEN 98 (219)
T ss_dssp HHHHHHHH--TCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC-----TTEEEEECBTT
T ss_pred HHHHHHHh--CCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEecccc
Confidence 35667777 778889999999999999999999976668999999999999999999988776 68999999999
Q ss_pred CCCCCCCcccceeccCccccccc
Q psy7834 123 KGYLDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~~~~~~l~~ 145 (492)
+.++++++||+|+++..++++.+
T Consensus 99 ~~~~~~~~fD~v~~~~~l~~~~~ 121 (219)
T 3dh0_A 99 KIPLPDNTVDFIFMAFTFHELSE 121 (219)
T ss_dssp BCSSCSSCEEEEEEESCGGGCSS
T ss_pred cCCCCCCCeeEEEeehhhhhcCC
Confidence 98888899999999888876543
No 195
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.34 E-value=1.6e-12 Score=120.36 Aligned_cols=104 Identities=21% Similarity=0.234 Sum_probs=80.7
Q ss_pred HHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCC
Q psy7834 199 AQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGRE 278 (492)
Q Consensus 199 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 278 (492)
..+++.+. ..++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|+++ .++.+..+|+..
T Consensus 42 ~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~~~ 105 (227)
T 3e8s_A 42 QAILLAIL--GRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA-----------GAGEVHLASYAQ 105 (227)
T ss_dssp HHHHHHHH--HTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT-----------CSSCEEECCHHH
T ss_pred HHHHHHhh--cCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh-----------cccccchhhHHh
Confidence 34555554 356789999999999999999887 34799999999999999876 145677877654
Q ss_pred C---C-cCCCCccEEEecCcch-----hhHHHHHHHhccCCeEEEEeCC
Q psy7834 279 G---H-AAEGPYDVIYVGGAVH-----HYPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 279 ~---~-~~~~~fD~i~s~~~~~-----~~~~~~~~~L~pgG~l~~~~~~ 318 (492)
. + ...++||+|+++.+++ .+..++.++|||||++++....
T Consensus 106 ~~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 106 LAEAKVPVGKDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp HHTTCSCCCCCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hcccccccCCCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEecC
Confidence 3 2 2345699999998887 2234889999999999998754
No 196
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.34 E-value=5.5e-12 Score=125.79 Aligned_cols=100 Identities=17% Similarity=0.179 Sum_probs=84.0
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||||||+|.++..++++. |..+++++|+ +.+++.|++++...+ ...+++++.+|+.+.+.+ .+|+
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~--~~D~ 259 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKG----VADRMRGIAVDIYKESYP--EADA 259 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTT----CTTTEEEEECCTTTSCCC--CCSE
T ss_pred CCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcC----CCCCEEEEeCccccCCCC--CCCE
Confidence 4667899999999999999999986 6789999999 999999999988753 234699999999765443 3499
Q ss_pred EEecCcchhhHH--------HHHHHhccCCeEEEEe
Q psy7834 289 IYVGGAVHHYPF--------KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 289 i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~ 316 (492)
|++..++|++++ ++.++|||||++++..
T Consensus 260 v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 260 VLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 999999987753 6789999999998754
No 197
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.34 E-value=2.8e-12 Score=116.77 Aligned_cols=93 Identities=18% Similarity=0.214 Sum_probs=74.0
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC-------
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGP-TGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH------- 280 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~------- 280 (492)
++++.+|||+|||+|.++..++++.++ .++|+|+|+|+.+ ..++++++++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------------~~~~v~~~~~d~~~~~~~~~~~~ 83 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------------PIPNVYFIQGEIGKDNMNNIKNI 83 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------------CCTTCEEEECCTTTTSSCCC---
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------------CCCCceEEEccccchhhhhhccc
Confidence 578899999999999999999998743 6899999999831 1246899999987654
Q ss_pred ------------------cCCCCccEEEecCcchh-----------------hHHHHHHHhccCCeEEEEeC
Q psy7834 281 ------------------AAEGPYDVIYVGGAVHH-----------------YPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 281 ------------------~~~~~fD~i~s~~~~~~-----------------~~~~~~~~L~pgG~l~~~~~ 317 (492)
.++++||+|+++..+++ +..++.++|||||++++.+.
T Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 84 NYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp --------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 34568999999877654 22357899999999999654
No 198
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.34 E-value=1.8e-12 Score=129.84 Aligned_cols=99 Identities=28% Similarity=0.286 Sum_probs=80.9
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||||||+|.++..+++.. ..+|+|+|+| .|++.|+++++.++ ...+++++++|+.+...+ ++||+
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g--~~~V~gvD~s-~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~-~~~D~ 132 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG--ARKVYAVEAT-KMADHARALVKANN----LDHIVEVIEGSVEDISLP-EKVDV 132 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT--CSEEEEEESS-TTHHHHHHHHHHTT----CTTTEEEEESCGGGCCCS-SCEEE
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC--CCEEEEEccH-HHHHHHHHHHHHcC----CCCeEEEEECchhhcCcC-CcceE
Confidence 4678899999999999999999874 3489999999 99999999998864 235699999999876544 78999
Q ss_pred EEecCcchhh---------HHHHHHHhccCCeEEEE
Q psy7834 289 IYVGGAVHHY---------PFKLMDQLKPGGVMWFT 315 (492)
Q Consensus 289 i~s~~~~~~~---------~~~~~~~L~pgG~l~~~ 315 (492)
|+++...+.+ ..++.++|||||++++.
T Consensus 133 Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 133 IISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp EEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred EEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 9997644332 23677999999999874
No 199
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.34 E-value=4.5e-12 Score=127.12 Aligned_cols=101 Identities=22% Similarity=0.236 Sum_probs=84.6
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||||||+|.++..+++.. +..+++++|+ +.+++.|++++...+ ...+++++.+|+.+. .+ ..||+
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~-~~-~~~D~ 251 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAG----LADRVTVAEGDFFKP-LP-VTADV 251 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTT----CTTTEEEEECCTTSC-CS-CCEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcC----CCCceEEEeCCCCCc-CC-CCCCE
Confidence 4667899999999999999999986 6779999999 999999999987753 234799999998652 23 24999
Q ss_pred EEecCcchhhHH--------HHHHHhccCCeEEEEeC
Q psy7834 289 IYVGGAVHHYPF--------KLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 289 i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~~ 317 (492)
|++..++|++++ ++.++|||||++++...
T Consensus 252 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 252 VLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999999987654 67899999999998653
No 200
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.34 E-value=6e-12 Score=114.93 Aligned_cols=91 Identities=22% Similarity=0.291 Sum_probs=79.0
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
...+++.+ .+.++.+|||+|||+|.++..+++.. +..+|+++|+|+++++.|+++...+++ .+++++++|+.
T Consensus 29 ~~~~l~~l--~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~~~~~d~~ 100 (204)
T 3e05_A 29 RAVTLSKL--RLQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVA-----RNVTLVEAFAP 100 (204)
T ss_dssp HHHHHHHT--TCCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTC-----TTEEEEECCTT
T ss_pred HHHHHHHc--CCCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCC-----CcEEEEeCChh
Confidence 56677777 78889999999999999999999985 568999999999999999999988776 68999999997
Q ss_pred CCCCCCCcccceeccCccc
Q psy7834 123 KGYLDEAPYDIIHVGGSIE 141 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~~~~~ 141 (492)
+.....++||+|+++...+
T Consensus 101 ~~~~~~~~~D~i~~~~~~~ 119 (204)
T 3e05_A 101 EGLDDLPDPDRVFIGGSGG 119 (204)
T ss_dssp TTCTTSCCCSEEEESCCTT
T ss_pred hhhhcCCCCCEEEECCCCc
Confidence 7655557899999987664
No 201
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.33 E-value=5.7e-12 Score=120.50 Aligned_cols=97 Identities=23% Similarity=0.337 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecC
Q psy7834 41 FQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGD 120 (492)
Q Consensus 41 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 120 (492)
.+...+++.+ .+.++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.|+++....++. ++++++++|
T Consensus 48 ~~~~~l~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~----~~~~~~~~d 119 (273)
T 3bus_A 48 RLTDEMIALL--DVRSGDRVLDVGCGIGKPAVRLATARD--VRVTGISISRPQVNQANARATAAGLA----NRVTFSYAD 119 (273)
T ss_dssp HHHHHHHHHS--CCCTTCEEEEESCTTSHHHHHHHHHSC--CEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECC
T ss_pred HHHHHHHHhc--CCCCCCEEEEeCCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHhcCCC----cceEEEECc
Confidence 3344555555 667889999999999999999999764 79999999999999999999887763 589999999
Q ss_pred CCCCCCCCCcccceeccCccccccc
Q psy7834 121 GRKGYLDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 121 ~~~~~~~~~~~D~i~~~~~~~~l~~ 145 (492)
+.++++++++||+|++..+++++.+
T Consensus 120 ~~~~~~~~~~fD~v~~~~~l~~~~~ 144 (273)
T 3bus_A 120 AMDLPFEDASFDAVWALESLHHMPD 144 (273)
T ss_dssp TTSCCSCTTCEEEEEEESCTTTSSC
T ss_pred cccCCCCCCCccEEEEechhhhCCC
Confidence 9999888889999999988877644
No 202
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.33 E-value=6.6e-12 Score=115.82 Aligned_cols=102 Identities=17% Similarity=0.160 Sum_probs=81.4
Q ss_pred hhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEec
Q psy7834 40 KFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLG 119 (492)
Q Consensus 40 ~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 119 (492)
....+.+++.+ ...++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.|++++...++.-....+++++++
T Consensus 15 ~~~~~~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 91 (217)
T 3jwh_A 15 QQRMNGVVAAL--KQSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQG 91 (217)
T ss_dssp HHHHHHHHHHH--HHTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEEC
T ss_pred HHHHHHHHHHH--HhcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeC
Confidence 33455666666 55678899999999999999999975 4479999999999999999998877652000127999999
Q ss_pred CCCCCCCCCCcccceeccCcccccc
Q psy7834 120 DGRKGYLDEAPYDIIHVGGSIEDIP 144 (492)
Q Consensus 120 d~~~~~~~~~~~D~i~~~~~~~~l~ 144 (492)
|+...+...++||+|++..+++++.
T Consensus 92 d~~~~~~~~~~fD~v~~~~~l~~~~ 116 (217)
T 3jwh_A 92 ALTYQDKRFHGYDAATVIEVIEHLD 116 (217)
T ss_dssp CTTSCCGGGCSCSEEEEESCGGGCC
T ss_pred CcccccccCCCcCEEeeHHHHHcCC
Confidence 9987777778999999988887654
No 203
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.33 E-value=4.9e-12 Score=130.04 Aligned_cols=102 Identities=20% Similarity=0.268 Sum_probs=83.7
Q ss_pred CCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc-CCCCccEE
Q psy7834 211 PGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA-AEGPYDVI 289 (492)
Q Consensus 211 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~i 289 (492)
+|.+|||+|||+|..|..+|++.+..++|+++|+|+.+++.+++|+++.+ ..++.++++|+..... ..++||+|
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g-----~~nv~~~~~D~~~~~~~~~~~fD~I 191 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG-----ISNVALTHFDGRVFGAAVPEMFDAI 191 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT-----CCSEEEECCCSTTHHHHSTTCEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCcEEEEeCCHHHhhhhccccCCEE
Confidence 89999999999999999999988667899999999999999999998864 4579999999876433 45689999
Q ss_pred EecCc------ch----------------------hhHHHHHHHhccCCeEEEEeC
Q psy7834 290 YVGGA------VH----------------------HYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 290 ~s~~~------~~----------------------~~~~~~~~~L~pgG~l~~~~~ 317 (492)
+++.. +. .+..++.++|||||+|++++.
T Consensus 192 l~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 192 LLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp EEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 98532 11 122367799999999999753
No 204
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.33 E-value=4.9e-12 Score=124.26 Aligned_cols=116 Identities=13% Similarity=0.035 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEcc
Q psy7834 196 KVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGD 275 (492)
Q Consensus 196 ~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d 275 (492)
.....+.+.+.. ..++.+|||+|||+|.++..+++.. . +|+++|+|+.|++.|++|+..++. ...+++++++|
T Consensus 139 ~~~~~l~~~~~~-~~~~~~VLDlgcGtG~~sl~la~~g-a--~V~~VD~s~~al~~a~~n~~~~gl---~~~~v~~i~~D 211 (332)
T 2igt_A 139 VHWEWLKNAVET-ADRPLKVLNLFGYTGVASLVAAAAG-A--EVTHVDASKKAIGWAKENQVLAGL---EQAPIRWICED 211 (332)
T ss_dssp HHHHHHHHHHHH-SSSCCEEEEETCTTCHHHHHHHHTT-C--EEEEECSCHHHHHHHHHHHHHHTC---TTSCEEEECSC
T ss_pred HHHHHHHHHHHh-cCCCCcEEEcccccCHHHHHHHHcC-C--EEEEEECCHHHHHHHHHHHHHcCC---CccceEEEECc
Confidence 333445555432 3467899999999999999999863 3 899999999999999999988641 11149999999
Q ss_pred CCCCCcC----CCCccEEEecCcc----------------hhhHHHHHHHhccCCeEEEEeCC
Q psy7834 276 GREGHAA----EGPYDVIYVGGAV----------------HHYPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 276 ~~~~~~~----~~~fD~i~s~~~~----------------~~~~~~~~~~L~pgG~l~~~~~~ 318 (492)
+.+.... .++||+|+++... ..+..++.++|+|||.+++.+..
T Consensus 212 ~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 212 AMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp HHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred HHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 8654321 4689999996531 12234678999999998887644
No 205
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.33 E-value=9e-12 Score=113.89 Aligned_cols=89 Identities=24% Similarity=0.365 Sum_probs=75.5
Q ss_pred hHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecC
Q psy7834 41 FQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGD 120 (492)
Q Consensus 41 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 120 (492)
.+...+++.+ .+.++.+|||+|||+|.++..+++. + .+|+|+|+|++|++.|+++.+.+++. .+++++++|
T Consensus 42 ~~~~~~l~~l--~~~~~~~vLDlGcG~G~~~~~la~~-~--~~v~~vD~s~~~~~~a~~~~~~~g~~----~~v~~~~~d 112 (204)
T 3njr_A 42 PMRALTLAAL--APRRGELLWDIGGGSGSVSVEWCLA-G--GRAITIEPRADRIENIQKNIDTYGLS----PRMRAVQGT 112 (204)
T ss_dssp HHHHHHHHHH--CCCTTCEEEEETCTTCHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESC
T ss_pred HHHHHHHHhc--CCCCCCEEEEecCCCCHHHHHHHHc-C--CEEEEEeCCHHHHHHHHHHHHHcCCC----CCEEEEeCc
Confidence 3356677777 7888999999999999999999998 3 89999999999999999999988872 389999999
Q ss_pred CCCCCCCCCcccceeccC
Q psy7834 121 GRKGYLDEAPYDIIHVGG 138 (492)
Q Consensus 121 ~~~~~~~~~~~D~i~~~~ 138 (492)
+.+......+||+|++..
T Consensus 113 ~~~~~~~~~~~D~v~~~~ 130 (204)
T 3njr_A 113 APAALADLPLPEAVFIGG 130 (204)
T ss_dssp TTGGGTTSCCCSEEEECS
T ss_pred hhhhcccCCCCCEEEECC
Confidence 988544456899998743
No 206
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.33 E-value=2.6e-12 Score=127.71 Aligned_cols=101 Identities=22% Similarity=0.329 Sum_probs=84.8
Q ss_pred CC-CCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc-CCCCcc
Q psy7834 210 KP-GAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA-AEGPYD 287 (492)
Q Consensus 210 ~~-~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD 287 (492)
.+ +.+|||||||+|.++..+++.. |..+++++|+ +.+++.|++++...+ ...+++++.+|+.+... ..+.||
T Consensus 177 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~D 250 (352)
T 3mcz_A 177 FARARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHD----LGGRVEFFEKNLLDARNFEGGAAD 250 (352)
T ss_dssp GTTCCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTT----CGGGEEEEECCTTCGGGGTTCCEE
T ss_pred cCCCCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcC----CCCceEEEeCCcccCcccCCCCcc
Confidence 44 7899999999999999999986 6789999999 889999999987753 23479999999876531 345699
Q ss_pred EEEecCcchhhHH--------HHHHHhccCCeEEEEe
Q psy7834 288 VIYVGGAVHHYPF--------KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 288 ~i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~ 316 (492)
+|++..++|++++ ++.++|+|||++++..
T Consensus 251 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 251 VVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999999988764 6789999999999854
No 207
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.31 E-value=6.4e-12 Score=116.04 Aligned_cols=105 Identities=21% Similarity=0.235 Sum_probs=83.6
Q ss_pred hhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEE
Q psy7834 38 FSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFV 117 (492)
Q Consensus 38 ~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 117 (492)
+.....+.+++.+ ...++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.|+++....++.-....+++++
T Consensus 13 ~~~~~~~~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~ 89 (219)
T 3jwg_A 13 LNQQRLGTVVAVL--KSVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLF 89 (219)
T ss_dssp HHHHHHHHHHHHH--HHTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEE
T ss_pred chHHHHHHHHHHH--hhcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEE
Confidence 4444456666766 55678899999999999999999975 44799999999999999999987665420000189999
Q ss_pred ecCCCCCCCCCCcccceeccCccccccc
Q psy7834 118 LGDGRKGYLDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 118 ~~d~~~~~~~~~~~D~i~~~~~~~~l~~ 145 (492)
++|+...+...++||+|++..+++++.+
T Consensus 90 ~~d~~~~~~~~~~fD~V~~~~~l~~~~~ 117 (219)
T 3jwg_A 90 QSSLVYRDKRFSGYDAATVIEVIEHLDE 117 (219)
T ss_dssp ECCSSSCCGGGTTCSEEEEESCGGGCCH
T ss_pred eCcccccccccCCCCEEEEHHHHHhCCH
Confidence 9999887777789999999988887653
No 208
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.31 E-value=2.7e-12 Score=126.81 Aligned_cols=109 Identities=22% Similarity=0.318 Sum_probs=80.7
Q ss_pred cccccCCcccCCccccccchhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy7834 19 ITNIGYGAHMQAPFQDNTKFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRAT 98 (492)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~ 98 (492)
.+++..+..+..|.. .+.+++.+ .+.++.+|||+|||+|.++..+++.+++.++|+++|+++.+++.|+
T Consensus 79 ~~~~~~~~~~~~~~~---------~~~~l~~l--~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~ 147 (336)
T 2b25_A 79 VVLMKRGTAITFPKD---------INMILSMM--DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAK 147 (336)
T ss_dssp HHHSCCSSCCCCHHH---------HHHHHHHH--TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHH
T ss_pred hhhhcCCCcccCHHH---------HHHHHHhc--CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Confidence 344555555555554 56777777 7889999999999999999999998777789999999999999999
Q ss_pred HhhhcCC-------CCccccCceEEEecCCCCC--CCCCCcccceeccCc
Q psy7834 99 HNVISGN-------PEFVKDGRIKFVLGDGRKG--YLDEAPYDIIHVGGS 139 (492)
Q Consensus 99 ~~~~~~~-------~~~~~~~~v~~~~~d~~~~--~~~~~~~D~i~~~~~ 139 (492)
++....+ +. -...+++++++|+.+. ++++++||+|+++..
T Consensus 148 ~~~~~~~~~~~ln~~~-~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~ 196 (336)
T 2b25_A 148 KNYKHWRDSWKLSHVE-EWPDNVDFIHKDISGATEDIKSLTFDAVALDML 196 (336)
T ss_dssp HHHHHHHHHHTTTCSS-CCCCCEEEEESCTTCCC-------EEEEEECSS
T ss_pred HHHHHhhccccccccc-ccCCceEEEECChHHcccccCCCCeeEEEECCC
Confidence 9987521 10 0015799999999886 345678999998644
No 209
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.31 E-value=4.9e-12 Score=124.15 Aligned_cols=106 Identities=27% Similarity=0.328 Sum_probs=81.7
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC--cCCCCc
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH--AAEGPY 286 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~f 286 (492)
.+++.+|||||||+|.++..+++.. +..+|+++|+|+.|++.|++++...... ...++++++++|+.+.. ..+++|
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~g-l~~~rv~~~~~D~~~~l~~~~~~~f 195 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIG-YEDPRVNLVIGDGVAFLKNAAEGSY 195 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGG-GGSTTEEEEESCHHHHHHTSCTTCE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccc-cCCCcEEEEECCHHHHHHhccCCCc
Confidence 3567899999999999999999874 5679999999999999999998642000 01357999999976532 134689
Q ss_pred cEEEecCcc----------hhhHHHHHHHhccCCeEEEEe
Q psy7834 287 DVIYVGGAV----------HHYPFKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 287 D~i~s~~~~----------~~~~~~~~~~L~pgG~l~~~~ 316 (492)
|+|+++... ..+..++.++|+|||+|++..
T Consensus 196 DlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 196 DAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred cEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 999987642 123358899999999999974
No 210
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.31 E-value=1.8e-12 Score=132.08 Aligned_cols=103 Identities=19% Similarity=0.244 Sum_probs=83.8
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc-CCCCcc
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA-AEGPYD 287 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD 287 (492)
+.+|.+|||+|||+|..+..+|++.+..++|+|+|+|+.+++.+++|+.+.+ .. +.++++|+..... ..++||
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G-----~~-v~~~~~Da~~l~~~~~~~FD 172 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG-----AP-LAVTQAPPRALAEAFGTYFH 172 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC-----CC-CEEECSCHHHHHHHHCSCEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-----Ce-EEEEECCHHHhhhhccccCC
Confidence 6789999999999999999999998666899999999999999999999875 34 8899999865432 357899
Q ss_pred EEEecCcc----------------------------hhhHHHHHHHhccCCeEEEEeC
Q psy7834 288 VIYVGGAV----------------------------HHYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 288 ~i~s~~~~----------------------------~~~~~~~~~~L~pgG~l~~~~~ 317 (492)
+|+++... ..+.+++.++|||||+|++++-
T Consensus 173 ~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 173 RVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp EEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred EEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 99975422 1123467889999999998653
No 211
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.30 E-value=3.6e-12 Score=114.45 Aligned_cols=86 Identities=22% Similarity=0.180 Sum_probs=71.0
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
..+.+++...+.++++|||+|||+|.++..+++.. .+|+|+|+|++|++.|+++.+.+++ .++++++++...
T Consensus 10 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~---~~v~~vD~s~~~l~~a~~~~~~~~~-----~~v~~~~~~~~~ 81 (185)
T 3mti_A 10 HMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGLS---KKVYAFDVQEQALGKTSQRLSDLGI-----ENTELILDGHEN 81 (185)
T ss_dssp HHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHHTC-----CCEEEEESCGGG
T ss_pred HHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEeCcHHH
Confidence 33334443467789999999999999999999983 8999999999999999999988776 689999988776
Q ss_pred CC-CCCCcccceecc
Q psy7834 124 GY-LDEAPYDIIHVG 137 (492)
Q Consensus 124 ~~-~~~~~~D~i~~~ 137 (492)
++ ..+++||+|+++
T Consensus 82 l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 82 LDHYVREPIRAAIFN 96 (185)
T ss_dssp GGGTCCSCEEEEEEE
T ss_pred HHhhccCCcCEEEEe
Confidence 53 346789999875
No 212
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.30 E-value=2.3e-12 Score=119.58 Aligned_cols=94 Identities=30% Similarity=0.386 Sum_probs=78.4
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCC--CCcCCCCcc
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGRE--GHAAEGPYD 287 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~fD 287 (492)
.++.+|||+|||+|.++..+++. + .+|+|+|+|+.+++.++++. .+++.+|+.. .+.++++||
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~~~~~~~~~~~------------~~~~~~d~~~~~~~~~~~~fD 95 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFPEAAEQAKEKL------------DHVVLGDIETMDMPYEEEQFD 95 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSHHHHHHHHTTS------------SEEEESCTTTCCCCSCTTCEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhC------------CcEEEcchhhcCCCCCCCccC
Confidence 46789999999999999999887 3 58999999999999987652 2678889865 334567899
Q ss_pred EEEecCcchhhH------HHHHHHhccCCeEEEEeCC
Q psy7834 288 VIYVGGAVHHYP------FKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 288 ~i~s~~~~~~~~------~~~~~~L~pgG~l~~~~~~ 318 (492)
+|++..+++|++ .++.++|+|||++++.++.
T Consensus 96 ~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 96 CVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp EEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred EEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 999999998875 3778999999999998754
No 213
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.30 E-value=5.2e-12 Score=121.99 Aligned_cols=99 Identities=19% Similarity=0.219 Sum_probs=80.0
Q ss_pred CceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC--cCCCCccEEE
Q psy7834 213 AKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH--AAEGPYDVIY 290 (492)
Q Consensus 213 ~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~i~ 290 (492)
.+|||||||+|.++..+++.. +..+|+++|+++.|++.|++++... ..++++++.+|+.+.. ..+++||+|+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~-----~~~rv~v~~~Da~~~l~~~~~~~fDvIi 164 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIP-----RAPRVKIRVDDARMVAESFTPASRDVII 164 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCC-----CTTTEEEEESCHHHHHHTCCTTCEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhcccc-----CCCceEEEECcHHHHHhhccCCCCCEEE
Confidence 399999999999999999976 6679999999999999999987542 2468999999986532 2357899999
Q ss_pred ecCcch----------hhHHHHHHHhccCCeEEEEeC
Q psy7834 291 VGGAVH----------HYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 291 s~~~~~----------~~~~~~~~~L~pgG~l~~~~~ 317 (492)
++...+ .+..++.++|+|||++++...
T Consensus 165 ~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 165 RDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp ECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 875332 223588999999999999764
No 214
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.30 E-value=7.4e-12 Score=122.33 Aligned_cols=92 Identities=12% Similarity=0.126 Sum_probs=79.9
Q ss_pred HHHHHHHHHh-cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 44 AMVLDDLSEE-LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 44 ~~~~~~l~~~-~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
+.+++.+ . +.++.+|||+|||+|.++..+++..+ .+|+|+|+++.|++.|+++....++. .+++++++|+.
T Consensus 106 ~~l~~~l--~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~ 177 (312)
T 3vc1_A 106 EFLMDHL--GQAGPDDTLVDAGCGRGGSMVMAHRRFG--SRVEGVTLSAAQADFGNRRARELRID----DHVRSRVCNML 177 (312)
T ss_dssp HHHHTTS--CCCCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCTT
T ss_pred HHHHHHh--ccCCCCCEEEEecCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCCC----CceEEEECChh
Confidence 3445544 4 67789999999999999999999854 79999999999999999999988873 58999999999
Q ss_pred CCCCCCCcccceeccCccccc
Q psy7834 123 KGYLDEAPYDIIHVGGSIEDI 143 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~~~~~~l 143 (492)
++++++++||+|++..+++++
T Consensus 178 ~~~~~~~~fD~V~~~~~l~~~ 198 (312)
T 3vc1_A 178 DTPFDKGAVTASWNNESTMYV 198 (312)
T ss_dssp SCCCCTTCEEEEEEESCGGGS
T ss_pred cCCCCCCCEeEEEECCchhhC
Confidence 998888999999998887765
No 215
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.30 E-value=8.7e-12 Score=124.36 Aligned_cols=101 Identities=25% Similarity=0.318 Sum_probs=84.3
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||||||+|.++..+++.. +..+++++|+ +.+++.|++++...+ ...+++++.+|+.+. .+. .||+
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~-~~~-~~D~ 252 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEG----LSDRVDVVEGDFFEP-LPR-KADA 252 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTT----CTTTEEEEECCTTSC-CSS-CEEE
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcC----CCCceEEEeCCCCCC-CCC-CccE
Confidence 4567899999999999999999986 6789999999 999999999988753 234799999998752 232 4999
Q ss_pred EEecCcchhhHH--------HHHHHhccCCeEEEEeC
Q psy7834 289 IYVGGAVHHYPF--------KLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 289 i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~~ 317 (492)
|++..++|++++ ++.++|||||++++...
T Consensus 253 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 289 (360)
T 1tw3_A 253 IILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER 289 (360)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 999999987653 67899999999998653
No 216
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.30 E-value=7.1e-12 Score=117.52 Aligned_cols=93 Identities=19% Similarity=0.328 Sum_probs=82.1
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
...+++.+ .+.++.+|||+|||+|.++..+++.. .+|+++|+|+.|++.|+++....++ .+++++++|++
T Consensus 10 ~~~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~~~~~d~~ 79 (239)
T 1xxl_A 10 LGLMIKTA--ECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGV-----ENVRFQQGTAE 79 (239)
T ss_dssp HHHHHHHH--TCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTC-----CSEEEEECBTT
T ss_pred cchHHHHh--CcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCC-----CCeEEEecccc
Confidence 35677777 88899999999999999999999986 6999999999999999999888776 68999999999
Q ss_pred CCCCCCCcccceeccCccccccc
Q psy7834 123 KGYLDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~~~~~~l~~ 145 (492)
++++++++||+|++..+++++.+
T Consensus 80 ~~~~~~~~fD~v~~~~~l~~~~~ 102 (239)
T 1xxl_A 80 SLPFPDDSFDIITCRYAAHHFSD 102 (239)
T ss_dssp BCCSCTTCEEEEEEESCGGGCSC
T ss_pred cCCCCCCcEEEEEECCchhhccC
Confidence 99888899999999877766543
No 217
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.30 E-value=3.9e-12 Score=134.38 Aligned_cols=105 Identities=17% Similarity=0.210 Sum_probs=85.5
Q ss_pred HHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC--
Q psy7834 203 EILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH-- 280 (492)
Q Consensus 203 ~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-- 280 (492)
+.+...+..+.+|||||||.|.++..||+++ ++|+|||+|+.+++.|+.++.+.+ ..+++|.++|++++.
T Consensus 58 ~~~~~~~~~~~~vLDvGCG~G~~~~~la~~g---a~V~giD~~~~~i~~a~~~a~~~~-----~~~~~~~~~~~~~~~~~ 129 (569)
T 4azs_A 58 DNLSRALGRPLNVLDLGCAQGFFSLSLASKG---ATIVGIDFQQENINVCRALAEENP-----DFAAEFRVGRIEEVIAA 129 (569)
T ss_dssp HHHHHHHTSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTST-----TSEEEEEECCHHHHHHH
T ss_pred HHHHhhcCCCCeEEEECCCCcHHHHHHHhCC---CEEEEECCCHHHHHHHHHHHHhcC-----CCceEEEECCHHHHhhh
Confidence 3344345667899999999999999999974 379999999999999999987643 247999999987652
Q ss_pred cCCCCccEEEecCcchhhHH--------HHHHHhccCCeEEEE
Q psy7834 281 AAEGPYDVIYVGGAVHHYPF--------KLMDQLKPGGVMWFT 315 (492)
Q Consensus 281 ~~~~~fD~i~s~~~~~~~~~--------~~~~~L~pgG~l~~~ 315 (492)
..+++||+|++..+++|+++ .+++.|+++|..++.
T Consensus 130 ~~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~ 172 (569)
T 4azs_A 130 LEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVIL 172 (569)
T ss_dssp CCTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEE
T ss_pred ccCCCccEEEECcchhcCCCHHHHHHHHHHHHHhccccceeeE
Confidence 34678999999999999985 566779999887664
No 218
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.29 E-value=5.3e-12 Score=120.31 Aligned_cols=83 Identities=18% Similarity=0.204 Sum_probs=69.6
Q ss_pred HHHHHHhcCCCCeEEEEcCcCcHHH-HHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC
Q psy7834 47 LDDLSEELTEGKKVLDIGSGNGYFT-ALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY 125 (492)
Q Consensus 47 ~~~l~~~~~~~~~vLDiG~G~G~~~-~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 125 (492)
..++ .++++++|||||||+|.++ ..+|+..+ ++|+|+|+|++|++.|++++++.++ .+++++++|+.+++
T Consensus 115 ~~la--~l~~g~rVLDIGcG~G~~ta~~lA~~~g--a~V~gIDis~~~l~~Ar~~~~~~gl-----~~v~~v~gDa~~l~ 185 (298)
T 3fpf_A 115 AALG--RFRRGERAVFIGGGPLPLTGILLSHVYG--MRVNVVEIEPDIAELSRKVIEGLGV-----DGVNVITGDETVID 185 (298)
T ss_dssp HHHT--TCCTTCEEEEECCCSSCHHHHHHHHTTC--CEEEEEESSHHHHHHHHHHHHHHTC-----CSEEEEESCGGGGG
T ss_pred HHHc--CCCCcCEEEEECCCccHHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHhcCC-----CCeEEEECchhhCC
Confidence 3455 7899999999999999776 44555443 8999999999999999999988776 79999999998865
Q ss_pred CCCCcccceeccCcc
Q psy7834 126 LDEAPYDIIHVGGSI 140 (492)
Q Consensus 126 ~~~~~~D~i~~~~~~ 140 (492)
+++||+|++....
T Consensus 186 --d~~FDvV~~~a~~ 198 (298)
T 3fpf_A 186 --GLEFDVLMVAALA 198 (298)
T ss_dssp --GCCCSEEEECTTC
T ss_pred --CCCcCEEEECCCc
Confidence 6899999986553
No 219
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.29 E-value=6.7e-12 Score=121.99 Aligned_cols=107 Identities=18% Similarity=0.215 Sum_probs=82.1
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc--CCCCcc
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA--AEGPYD 287 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~fD 287 (492)
+++.+|||||||+|.++..+++.. +..+|+++|+|+.+++.|++++...... ...++++++.+|+..... .+++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRS-LADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGG-GGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcc-cCCCcEEEEECcHHHHHHhccCCcee
Confidence 567899999999999999999764 5679999999999999999987421000 124579999999865433 367899
Q ss_pred EEEecCcchh----------hHHHHHHHhccCCeEEEEeCC
Q psy7834 288 VIYVGGAVHH----------YPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 288 ~i~s~~~~~~----------~~~~~~~~L~pgG~l~~~~~~ 318 (492)
+|+++...+. +..++.++|||||++++..+.
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 9999875443 234889999999999997643
No 220
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.29 E-value=1.1e-11 Score=117.97 Aligned_cols=102 Identities=25% Similarity=0.258 Sum_probs=85.0
Q ss_pred hccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCc
Q psy7834 207 DYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPY 286 (492)
Q Consensus 207 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 286 (492)
..+++|.+|||+|||+|.++..+|++. ..+|+++|+|+.+++.+++|++.++ ..++++++++|+.+.. ..+.|
T Consensus 121 ~~~~~g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~----v~~~v~~~~~D~~~~~-~~~~~ 193 (278)
T 3k6r_A 121 KVAKPDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNK----VEDRMSAYNMDNRDFP-GENIA 193 (278)
T ss_dssp HHCCTTCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTT----CTTTEEEECSCTTTCC-CCSCE
T ss_pred HhcCCCCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEeCcHHHhc-cccCC
Confidence 347889999999999999999999874 3589999999999999999999875 2457999999997643 45789
Q ss_pred cEEEecCcc--hhhHHHHHHHhccCCeEEEE
Q psy7834 287 DVIYVGGAV--HHYPFKLMDQLKPGGVMWFT 315 (492)
Q Consensus 287 D~i~s~~~~--~~~~~~~~~~L~pgG~l~~~ 315 (492)
|.|+++... +.+.+...++|||||.+.+.
T Consensus 194 D~Vi~~~p~~~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 194 DRILMGYVVRTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp EEEEECCCSSGGGGHHHHHHHEEEEEEEEEE
T ss_pred CEEEECCCCcHHHHHHHHHHHcCCCCEEEEE
Confidence 999988543 34456788999999998774
No 221
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.29 E-value=6.1e-12 Score=124.12 Aligned_cols=99 Identities=18% Similarity=0.308 Sum_probs=82.8
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.+ .+|||+|||+|.++..+++.. |..+++++|+ +.+++.|++++...+ ...+++++.+|+.+ +.+ ++||+
T Consensus 166 ~~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~-~~~-~~~D~ 236 (334)
T 2ip2_A 166 FRG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLL----AGERVSLVGGDMLQ-EVP-SNGDI 236 (334)
T ss_dssp CTT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHH----HTTSEEEEESCTTT-CCC-SSCSE
T ss_pred CCC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcC----CCCcEEEecCCCCC-CCC-CCCCE
Confidence 344 899999999999999999986 6779999999 999999999876542 12479999999876 333 57999
Q ss_pred EEecCcchhhHH--------HHHHHhccCCeEEEEe
Q psy7834 289 IYVGGAVHHYPF--------KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 289 i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~ 316 (492)
|++..++|++++ ++.++|+|||++++..
T Consensus 237 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 237 YLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999999986643 6789999999999864
No 222
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.29 E-value=7e-12 Score=124.33 Aligned_cols=97 Identities=26% Similarity=0.280 Sum_probs=76.7
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEE
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVI 289 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i 289 (492)
.+|++|||||||+|.++..+|+.+ ..+|+|+|.|+ |++.|+++++.++ ...+|+++++|+++...+ ++||+|
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aG--A~~V~ave~s~-~~~~a~~~~~~n~----~~~~i~~i~~~~~~~~lp-e~~Dvi 153 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAG--ARRVYAVEASA-IWQQAREVVRFNG----LEDRVHVLPGPVETVELP-EQVDAI 153 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-THHHHHHHHHHTT----CTTTEEEEESCTTTCCCS-SCEEEE
T ss_pred cCCCEEEEeCCCccHHHHHHHHhC--CCEEEEEeChH-HHHHHHHHHHHcC----CCceEEEEeeeeeeecCC-ccccEE
Confidence 368899999999999998888764 34899999996 8999999998875 346799999999875443 689999
Q ss_pred EecCc---c------hhhHHHHHHHhccCCeEEE
Q psy7834 290 YVGGA---V------HHYPFKLMDQLKPGGVMWF 314 (492)
Q Consensus 290 ~s~~~---~------~~~~~~~~~~L~pgG~l~~ 314 (492)
+|... + ..+.....++|||||+++-
T Consensus 154 vsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 154 VSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp ECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred EeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 98542 2 1222356789999999875
No 223
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.29 E-value=8.1e-12 Score=120.24 Aligned_cols=111 Identities=22% Similarity=0.276 Sum_probs=85.9
Q ss_pred cChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE
Q psy7834 193 SSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV 272 (492)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~ 272 (492)
..+.+...+++.+. +.++.+|||||||+|.++..+++.. .+|+|+|+|+.|++.+++++...+ ..++++++
T Consensus 12 ~d~~i~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~ 82 (285)
T 1zq9_A 12 KNPLIINSIIDKAA--LRPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTP----VASKLQVL 82 (285)
T ss_dssp CCHHHHHHHHHHTC--CCTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTST----TGGGEEEE
T ss_pred CCHHHHHHHHHhcC--CCCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcC----CCCceEEE
Confidence 45667777777764 6778899999999999999999884 379999999999999999886532 12479999
Q ss_pred EccCCCCCcCCCCccEEEecCcchhhHH---------------------HH--HHHhccCCeEEE
Q psy7834 273 DGDGREGHAAEGPYDVIYVGGAVHHYPF---------------------KL--MDQLKPGGVMWF 314 (492)
Q Consensus 273 ~~d~~~~~~~~~~fD~i~s~~~~~~~~~---------------------~~--~~~L~pgG~l~~ 314 (492)
++|+.....+ +||+|+++..+++..+ ++ .++|+|||.++.
T Consensus 83 ~~D~~~~~~~--~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y~ 145 (285)
T 1zq9_A 83 VGDVLKTDLP--FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYC 145 (285)
T ss_dssp ESCTTTSCCC--CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTCS
T ss_pred Ecceecccch--hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcccc
Confidence 9999765433 7999999876654432 22 258899998753
No 224
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.29 E-value=9.8e-12 Score=117.66 Aligned_cols=94 Identities=29% Similarity=0.428 Sum_probs=79.7
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
...+++.+. .+.++.+|||+|||+|.++..+++..+ ++|+|+|+|+.+++.|+++....++. ++++++++|+.
T Consensus 34 ~~~~l~~l~-~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~ 106 (257)
T 3f4k_A 34 TRKAVSFIN-ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCA----DRVKGITGSMD 106 (257)
T ss_dssp HHHHHTTSC-CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCTT
T ss_pred HHHHHHHHh-cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCC----CceEEEECChh
Confidence 344444442 456788999999999999999999973 59999999999999999999988874 56999999999
Q ss_pred CCCCCCCcccceeccCccccc
Q psy7834 123 KGYLDEAPYDIIHVGGSIEDI 143 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~~~~~~l 143 (492)
++++++++||+|++..+++++
T Consensus 107 ~~~~~~~~fD~v~~~~~l~~~ 127 (257)
T 3f4k_A 107 NLPFQNEELDLIWSEGAIYNI 127 (257)
T ss_dssp SCSSCTTCEEEEEEESCSCCC
T ss_pred hCCCCCCCEEEEEecChHhhc
Confidence 998888999999998877654
No 225
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.28 E-value=5.1e-12 Score=130.17 Aligned_cols=100 Identities=27% Similarity=0.285 Sum_probs=80.4
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
..++.+|||||||+|.++..+++. +..+|+|+|+|+ |++.|++++..++ ..++++++++|+.+... .++||+
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~g----l~~~v~~~~~d~~~~~~-~~~fD~ 227 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNN----LTDRIVVIPGKVEEVSL-PEQVDI 227 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTT----CTTTEEEEESCTTTCCC-SSCEEE
T ss_pred hcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcC----CCCcEEEEECchhhCcc-CCCeEE
Confidence 346789999999999999999875 456899999999 9999999998764 23589999999977433 358999
Q ss_pred EEecCcchhhH--------HHHHHHhccCCeEEEEe
Q psy7834 289 IYVGGAVHHYP--------FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 289 i~s~~~~~~~~--------~~~~~~L~pgG~l~~~~ 316 (492)
|+++...+++. .++.+.|||||++++..
T Consensus 228 Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 228 IISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp EECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred EEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 99987755442 14568999999998643
No 226
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.28 E-value=9.3e-12 Score=120.48 Aligned_cols=107 Identities=21% Similarity=0.201 Sum_probs=81.0
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC-CcCCCCccE
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG-HAAEGPYDV 288 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~ 288 (492)
+.+.+|||||||+|.++..+++.. +..+|+++|+|+.+++.|++++...+.. ...++++++.+|+... ....++||+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~-~~~~~v~~~~~D~~~~l~~~~~~fD~ 166 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCG-FDDPRAEIVIANGAEYVRKFKNEFDV 166 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGG-GGCTTEEEEESCHHHHGGGCSSCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccc-cCCCceEEEECcHHHHHhhCCCCceE
Confidence 456899999999999999999874 4679999999999999999987541000 1235899999997542 223568999
Q ss_pred EEecCcch-----------hhHHHHHHHhccCCeEEEEeCC
Q psy7834 289 IYVGGAVH-----------HYPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 289 i~s~~~~~-----------~~~~~~~~~L~pgG~l~~~~~~ 318 (492)
|+++...+ .+..++.+.|+|||++++....
T Consensus 167 Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 167 IIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 99875433 2335889999999999997543
No 227
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.28 E-value=1e-11 Score=118.83 Aligned_cols=107 Identities=21% Similarity=0.237 Sum_probs=83.4
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC-cCCCCccE
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH-AAEGPYDV 288 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~ 288 (492)
+.+.+|||||||+|.++..+++.. +..+|+++|+++.+++.|++++...... ...++++++.+|+.+.. ...++||+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~-~~~~rv~v~~~D~~~~l~~~~~~fD~ 151 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGK-LDDPRVDVQVDDGFMHIAKSENQYDV 151 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTT-TTSTTEEEEESCSHHHHHTCCSCEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccc-cCCCceEEEECcHHHHHhhCCCCeeE
Confidence 457899999999999999998764 4579999999999999999987542100 12468999999986532 23568999
Q ss_pred EEecCcch----------hhHHHHHHHhccCCeEEEEeCC
Q psy7834 289 IYVGGAVH----------HYPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 289 i~s~~~~~----------~~~~~~~~~L~pgG~l~~~~~~ 318 (492)
|+++...+ .+..++.+.|+|||++++....
T Consensus 152 Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 152 IMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp EEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 99986543 3446899999999999997643
No 228
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.28 E-value=1.2e-11 Score=118.45 Aligned_cols=95 Identities=23% Similarity=0.422 Sum_probs=79.4
Q ss_pred HHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHH------HHHHHHHhhhcCCCCccccCceEEEe
Q psy7834 45 MVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQ------LVQRATHNVISGNPEFVKDGRIKFVL 118 (492)
Q Consensus 45 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~------~~~~a~~~~~~~~~~~~~~~~v~~~~ 118 (492)
.+++.+ .+.++.+|||||||+|.++..+++..++..+|+|+|+|+. |++.|+++....++. +++++++
T Consensus 34 ~l~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~----~~v~~~~ 107 (275)
T 3bkx_A 34 AIAEAW--QVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG----DRLTVHF 107 (275)
T ss_dssp HHHHHH--TCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG----GGEEEEC
T ss_pred HHHHHc--CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCC----CceEEEE
Confidence 444444 6788999999999999999999998766689999999997 999999999887763 6899999
Q ss_pred cC---CCCCCCCCCcccceeccCccccccc
Q psy7834 119 GD---GRKGYLDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 119 ~d---~~~~~~~~~~~D~i~~~~~~~~l~~ 145 (492)
+| ...+++++++||+|++..+++++.+
T Consensus 108 ~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~ 137 (275)
T 3bkx_A 108 NTNLSDDLGPIADQHFDRVVLAHSLWYFAS 137 (275)
T ss_dssp SCCTTTCCGGGTTCCCSEEEEESCGGGSSC
T ss_pred CChhhhccCCCCCCCEEEEEEccchhhCCC
Confidence 98 4555667789999999888766544
No 229
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.28 E-value=1.9e-11 Score=125.44 Aligned_cols=104 Identities=21% Similarity=0.279 Sum_probs=84.1
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC--cCCCCc
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH--AAEGPY 286 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~f 286 (492)
+.+|.+|||+|||+|..+..+++..+..++|+++|+|+.+++.+++++.+.+ ..+++++++|+.... ..+++|
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g-----~~~v~~~~~D~~~~~~~~~~~~f 331 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG-----IKIVKPLVKDARKAPEIIGEEVA 331 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT-----CCSEEEECSCTTCCSSSSCSSCE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC-----CCcEEEEEcChhhcchhhccCCC
Confidence 6788999999999999999999987444899999999999999999998864 457999999987654 233689
Q ss_pred cEEEecCc------ch----------------------hhHHHHHHHhccCCeEEEEeC
Q psy7834 287 DVIYVGGA------VH----------------------HYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 287 D~i~s~~~------~~----------------------~~~~~~~~~L~pgG~l~~~~~ 317 (492)
|+|+++.. ++ .+.+++.+.|||||+|++++.
T Consensus 332 D~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 332 DKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp EEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred CEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 99997432 11 223477889999999998753
No 230
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.28 E-value=6.4e-12 Score=115.71 Aligned_cols=81 Identities=23% Similarity=0.317 Sum_probs=71.0
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
.+.++.+|||||||+|++++.+++.. +..+|+|+|+++.+++.|++|++.+++. +++++.++|+.+...+.++||
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~~al~~A~~N~~~~gl~----~~I~~~~gD~l~~~~~~~~~D 92 (230)
T 3lec_A 18 YVPKGARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVNGPYQSALKNVSEHGLT----SKIDVRLANGLSAFEEADNID 92 (230)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSHHHHHHHHHHHHHTTCT----TTEEEEECSGGGGCCGGGCCC
T ss_pred hCCCCCEEEEECCchHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEECchhhccccccccC
Confidence 56788999999999999999999984 5579999999999999999999999984 679999999988766555899
Q ss_pred ceeccC
Q psy7834 133 IIHVGG 138 (492)
Q Consensus 133 ~i~~~~ 138 (492)
+|+..+
T Consensus 93 ~IviaG 98 (230)
T 3lec_A 93 TITICG 98 (230)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 988643
No 231
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.28 E-value=2.7e-11 Score=121.14 Aligned_cols=114 Identities=17% Similarity=0.149 Sum_probs=86.3
Q ss_pred ChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEE
Q psy7834 194 SPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVD 273 (492)
Q Consensus 194 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~ 273 (492)
.+.+.+.++... ..++.+|||+|||+|.++..++... +.++|+|+|+|+.|++.|++|+..++ ..+++++++
T Consensus 203 ~~~la~~l~~~~---~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~g----l~~~i~~~~ 274 (373)
T 3tm4_A 203 KASIANAMIELA---ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAG----VLDKIKFIQ 274 (373)
T ss_dssp CHHHHHHHHHHH---TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTT----CGGGCEEEE
T ss_pred cHHHHHHHHHhh---cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcC----CCCceEEEE
Confidence 444455555444 5778999999999999999999875 55689999999999999999998864 125799999
Q ss_pred ccCCCCCcCCCCccEEEecCcch--------------hhHHHHHHHhccCCeEEEEeC
Q psy7834 274 GDGREGHAAEGPYDVIYVGGAVH--------------HYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 274 ~d~~~~~~~~~~fD~i~s~~~~~--------------~~~~~~~~~L~pgG~l~~~~~ 317 (492)
+|+.+.+.+.++||+|+++..+. .+.+++.++| ||.+++...
T Consensus 275 ~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~ 330 (373)
T 3tm4_A 275 GDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT 330 (373)
T ss_dssp CCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES
T ss_pred CChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC
Confidence 99988766668899999986532 1223566666 555555443
No 232
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.28 E-value=8.1e-12 Score=121.21 Aligned_cols=103 Identities=23% Similarity=0.246 Sum_probs=81.2
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhh--CCCCCCCCcEEEEEccCCCC-CcCCCCc
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTY--YPNLMEGGRVQFVDGDGREG-HAAEGPY 286 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~--~~~~~~~~~v~~~~~d~~~~-~~~~~~f 286 (492)
.++.+|||||||+|.++..++++. +..+|+++|+|+.|++.|++++... + ...++++++.+|+.+. ....++|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~---~~~~rv~v~~~Da~~~l~~~~~~f 169 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIG---YSSSKLTLHVGDGFEFMKQNQDAF 169 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGG---GGCTTEEEEESCHHHHHHTCSSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcc---cCCCcEEEEECcHHHHHhhCCCCc
Confidence 457899999999999999999874 5679999999999999999987641 1 1135899999998642 2235789
Q ss_pred cEEEecCcch----------hhHHHHHHHhccCCeEEEEe
Q psy7834 287 DVIYVGGAVH----------HYPFKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 287 D~i~s~~~~~----------~~~~~~~~~L~pgG~l~~~~ 316 (492)
|+|+++...+ .+..++.++|+|||++++..
T Consensus 170 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 170 DVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 9999876543 23458899999999999975
No 233
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.28 E-value=1.4e-11 Score=113.38 Aligned_cols=95 Identities=23% Similarity=0.312 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCC
Q psy7834 42 QQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDG 121 (492)
Q Consensus 42 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 121 (492)
+...+++.+ ...++ +|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|++++...++. .+++++++|+
T Consensus 32 ~~~~~~~~~--~~~~~-~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~ 102 (219)
T 3dlc_A 32 IAENIINRF--GITAG-TCIDIGSGPGALSIALAKQS--DFSIRALDFSKHMNEIALKNIADANLN----DRIQIVQGDV 102 (219)
T ss_dssp HHHHHHHHH--CCCEE-EEEEETCTTSHHHHHHHHHS--EEEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECBT
T ss_pred HHHHHHHhc--CCCCC-EEEEECCCCCHHHHHHHHcC--CCeEEEEECCHHHHHHHHHHHHhcccc----CceEEEEcCH
Confidence 345555555 44555 99999999999999999983 279999999999999999999888763 6899999999
Q ss_pred CCCCCCCCcccceeccCccccccc
Q psy7834 122 RKGYLDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 122 ~~~~~~~~~~D~i~~~~~~~~l~~ 145 (492)
.++++++++||+|+++.+++++.+
T Consensus 103 ~~~~~~~~~~D~v~~~~~l~~~~~ 126 (219)
T 3dlc_A 103 HNIPIEDNYADLIVSRGSVFFWED 126 (219)
T ss_dssp TBCSSCTTCEEEEEEESCGGGCSC
T ss_pred HHCCCCcccccEEEECchHhhccC
Confidence 999888899999999988876533
No 234
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.27 E-value=5.2e-11 Score=119.21 Aligned_cols=102 Identities=12% Similarity=0.063 Sum_probs=82.6
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCC-CCc-CCCCcc
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGRE-GHA-AEGPYD 287 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~~fD 287 (492)
.++.+|||+| |+|.++..+++.. +.++|+++|+|+.|++.|+++++.++ ..+++++++|+.+ .+. .+++||
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~-~~~~v~~vDi~~~~l~~a~~~~~~~g-----~~~v~~~~~D~~~~l~~~~~~~fD 243 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSG-LPKRIAVLDIDERLTKFIEKAANEIG-----YEDIEIFTFDLRKPLPDYALHKFD 243 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHT-CCSEEEEECSCHHHHHHHHHHHHHHT-----CCCEEEECCCTTSCCCTTTSSCBS
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC-----CCCEEEEEChhhhhchhhccCCcc
Confidence 3678999999 9999999998874 56799999999999999999998864 2379999999987 332 246899
Q ss_pred EEEecCcchh-----hHHHHHHHhccCCe-EEEEeCC
Q psy7834 288 VIYVGGAVHH-----YPFKLMDQLKPGGV-MWFTIGN 318 (492)
Q Consensus 288 ~i~s~~~~~~-----~~~~~~~~L~pgG~-l~~~~~~ 318 (492)
+|+++..++. +..++.++|||||+ +++++..
T Consensus 244 ~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 244 TFITDPPETLEAIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred EEEECCCCchHHHHHHHHHHHHHcccCCeEEEEEEec
Confidence 9999976542 33588899999995 4666654
No 235
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.27 E-value=1.1e-11 Score=118.14 Aligned_cols=94 Identities=27% Similarity=0.369 Sum_probs=79.8
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
..++++.+. .+.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|+++....++. ++++++++|+.
T Consensus 34 ~~~~l~~l~-~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~ 106 (267)
T 3kkz_A 34 TLKALSFID-NLTEKSLIADIGCGTGGQTMVLAGHV--TGQVTGLDFLSGFIDIFNRNARQSGLQ----NRVTGIVGSMD 106 (267)
T ss_dssp HHHHHTTCC-CCCTTCEEEEETCTTCHHHHHHHTTC--SSEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCTT
T ss_pred HHHHHHhcc-cCCCCCEEEEeCCCCCHHHHHHHhcc--CCEEEEEeCCHHHHHHHHHHHHHcCCC----cCcEEEEcChh
Confidence 344555552 35688999999999999999999983 269999999999999999999888874 67999999999
Q ss_pred CCCCCCCcccceeccCccccc
Q psy7834 123 KGYLDEAPYDIIHVGGSIEDI 143 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~~~~~~l 143 (492)
++++++++||+|++..+++++
T Consensus 107 ~~~~~~~~fD~i~~~~~~~~~ 127 (267)
T 3kkz_A 107 DLPFRNEELDLIWSEGAIYNI 127 (267)
T ss_dssp SCCCCTTCEEEEEESSCGGGT
T ss_pred hCCCCCCCEEEEEEcCCceec
Confidence 988888999999998877654
No 236
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.27 E-value=4e-12 Score=112.72 Aligned_cols=94 Identities=23% Similarity=0.370 Sum_probs=76.2
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC--------
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH-------- 280 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-------- 280 (492)
+.++.+|||+|||+|.++..+++..++..+++|+|+|+ |++. .+++++++|+.+..
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------------~~~~~~~~d~~~~~~~~~~~~~ 83 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------------VGVDFLQGDFRDELVMKALLER 83 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------------TTEEEEESCTTSHHHHHHHHHH
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------------CcEEEEEcccccchhhhhhhcc
Confidence 56788999999999999999999876667999999999 7532 36899999987654
Q ss_pred cCCCCccEEEecCcchh-----------------hHHHHHHHhccCCeEEEEeCC
Q psy7834 281 AAEGPYDVIYVGGAVHH-----------------YPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 281 ~~~~~fD~i~s~~~~~~-----------------~~~~~~~~L~pgG~l~~~~~~ 318 (492)
.++++||+|+++..+++ +..++.++|+|||.+++....
T Consensus 84 ~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 84 VGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp HTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred CCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 45678999999876542 234788999999999997643
No 237
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.27 E-value=3.2e-12 Score=122.09 Aligned_cols=96 Identities=20% Similarity=0.148 Sum_probs=70.7
Q ss_pred CCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE-EccCCCCC---cCCCCc
Q psy7834 211 PGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV-DGDGREGH---AAEGPY 286 (492)
Q Consensus 211 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~-~~d~~~~~---~~~~~f 286 (492)
++.+|||+|||||.++..++++. .++|+|+|+|+.|++.+.++- +++... ..++.... .+..+|
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~g--a~~V~aVDvs~~mL~~a~r~~----------~rv~~~~~~ni~~l~~~~l~~~~f 152 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNG--AKLVYAVDVGTNQLVWKLRQD----------DRVRSMEQYNFRYAEPVDFTEGLP 152 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CSEEEEECSSSSCSCHHHHTC----------TTEEEECSCCGGGCCGGGCTTCCC
T ss_pred cccEEEecCCCccHHHHHHHhCC--CCEEEEEECCHHHHHHHHHhC----------cccceecccCceecchhhCCCCCC
Confidence 57899999999999999998873 458999999999998854421 233322 23333222 123459
Q ss_pred cEEEecCcchhhH---HHHHHHhccCCeEEEEeCC
Q psy7834 287 DVIYVGGAVHHYP---FKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 287 D~i~s~~~~~~~~---~~~~~~L~pgG~l~~~~~~ 318 (492)
|+|+++.+++++. .++.++|||||++++.+.|
T Consensus 153 D~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~lvkP 187 (291)
T 3hp7_A 153 SFASIDVSFISLNLILPALAKILVDGGQVVALVKP 187 (291)
T ss_dssp SEEEECCSSSCGGGTHHHHHHHSCTTCEEEEEECG
T ss_pred CEEEEEeeHhhHHHHHHHHHHHcCcCCEEEEEECc
Confidence 9999988877654 5999999999999996543
No 238
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.26 E-value=4.9e-12 Score=128.64 Aligned_cols=104 Identities=18% Similarity=0.200 Sum_probs=85.1
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc-CCCCcc
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA-AEGPYD 287 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD 287 (492)
+.+|.+|||+|||+|..|..+|++.+..++|+++|+|+.+++.+++|+.+.+ ..++.++++|+..... ..++||
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g-----~~nv~v~~~Da~~l~~~~~~~FD 177 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG-----VSNAIVTNHAPAELVPHFSGFFD 177 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT-----CSSEEEECCCHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC-----CCceEEEeCCHHHhhhhccccCC
Confidence 6789999999999999999999988667899999999999999999999875 4579999999865431 357899
Q ss_pred EEEecCcc------h----------------------hhHHHHHHHhccCCeEEEEeC
Q psy7834 288 VIYVGGAV------H----------------------HYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 288 ~i~s~~~~------~----------------------~~~~~~~~~L~pgG~l~~~~~ 317 (492)
+|+++... . .+.+++.++|||||+|++++-
T Consensus 178 ~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 178 RIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp EEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred EEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 99987531 1 223467789999999998653
No 239
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.26 E-value=1.4e-11 Score=111.83 Aligned_cols=82 Identities=24% Similarity=0.330 Sum_probs=72.2
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC-CCCCcc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY-LDEAPY 131 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~ 131 (492)
.++++++|||+|||+|.++..+++..++.++|+|+|+++.|++.|++++..+++. .+++++++|+.+++ ..+++|
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~f 94 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLI----DRVTLIKDGHQNMDKYIDCPV 94 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCG----GGEEEECSCGGGGGGTCCSCE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CCeEEEECCHHHHhhhccCCc
Confidence 6778899999999999999999999766679999999999999999999888763 68999999998875 456889
Q ss_pred cceeccC
Q psy7834 132 DIIHVGG 138 (492)
Q Consensus 132 D~i~~~~ 138 (492)
|+|+++.
T Consensus 95 D~v~~~~ 101 (197)
T 3eey_A 95 KAVMFNL 101 (197)
T ss_dssp EEEEEEE
T ss_pred eEEEEcC
Confidence 9998853
No 240
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.26 E-value=1.6e-11 Score=115.95 Aligned_cols=88 Identities=15% Similarity=0.027 Sum_probs=68.7
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhc----------CCCCc--cccCceEEEecCC
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVIS----------GNPEF--VKDGRIKFVLGDG 121 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~----------~~~~~--~~~~~v~~~~~d~ 121 (492)
..++.+|||+|||+|..+..|++.+ .+|+|||+|+.|++.|+++... .+... -...+++++++|+
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~~G---~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~ 142 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFADRG---HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI 142 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHTT---CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred CCCCCeEEEeCCCCcHHHHHHHHCC---CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence 3578899999999999999999985 7999999999999999876531 00000 0015799999999
Q ss_pred CCCCCCC-CcccceeccCcccccc
Q psy7834 122 RKGYLDE-APYDIIHVGGSIEDIP 144 (492)
Q Consensus 122 ~~~~~~~-~~~D~i~~~~~~~~l~ 144 (492)
.++++.+ ++||+|++..++..++
T Consensus 143 ~~l~~~~~~~FD~V~~~~~l~~l~ 166 (252)
T 2gb4_A 143 FDLPRANIGKFDRIWDRGALVAIN 166 (252)
T ss_dssp TTGGGGCCCCEEEEEESSSTTTSC
T ss_pred ccCCcccCCCEEEEEEhhhhhhCC
Confidence 9988754 8999999877775543
No 241
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.26 E-value=7.7e-12 Score=116.11 Aligned_cols=80 Identities=21% Similarity=0.244 Sum_probs=70.1
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
.+.++.+|||||||+|++++.+++.. +..+|+|+|+++.+++.|++|++.+++. +++++.++|+.+...+.++||
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~----~~I~v~~gD~l~~~~~~~~~D 92 (244)
T 3gnl_A 18 YITKNERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVDGPFQSAQKQVRSSGLT----EQIDVRKGNGLAVIEKKDAID 92 (244)
T ss_dssp TCCSSEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCT----TTEEEEECSGGGGCCGGGCCC
T ss_pred hCCCCCEEEEECCccHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCC----ceEEEEecchhhccCcccccc
Confidence 56788999999999999999999984 5579999999999999999999999984 679999999988765445699
Q ss_pred ceecc
Q psy7834 133 IIHVG 137 (492)
Q Consensus 133 ~i~~~ 137 (492)
+|++.
T Consensus 93 ~Ivia 97 (244)
T 3gnl_A 93 TIVIA 97 (244)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99864
No 242
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.26 E-value=8.1e-12 Score=120.04 Aligned_cols=105 Identities=21% Similarity=0.237 Sum_probs=80.9
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCC-------CCCcEEEEEccCCCCCc
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLM-------EGGRVQFVDGDGREGHA 281 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~-------~~~~v~~~~~d~~~~~~ 281 (492)
.+++.+|||||||+|.++..+++. +..+|+++|+|+.+++.|++++ ..... . ..++++++.+|+.+...
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~~~-l~~~~~~~~~~~v~~~~~D~~~~l~ 148 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KIDNG-LLEAMLNGKHEKAKLTIGDGFEFIK 148 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTTTT-HHHHHHTTCCSSEEEEESCHHHHHH
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhccc-cccccccCCCCcEEEEECchHHHhc
Confidence 356789999999999999999987 4679999999999999999987 32100 0 23579999999754221
Q ss_pred CCCCccEEEecCcch----------hhHHHHHHHhccCCeEEEEeC
Q psy7834 282 AEGPYDVIYVGGAVH----------HYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 282 ~~~~fD~i~s~~~~~----------~~~~~~~~~L~pgG~l~~~~~ 317 (492)
..++||+|+++...+ .+..++.+.|+|||++++..+
T Consensus 149 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 149 NNRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp HCCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 156899999886532 233588999999999999753
No 243
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.26 E-value=1.3e-11 Score=126.02 Aligned_cols=103 Identities=22% Similarity=0.270 Sum_probs=88.9
Q ss_pred CCcccCCccccccchhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhc
Q psy7834 24 YGAHMQAPFQDNTKFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVIS 103 (492)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~ 103 (492)
+...+..+.++|...++.+...+++++ .+.++.+|||+|||+|.++..|++.. .+|+|+|+|++|++.|+++++.
T Consensus 256 ~~~~~~~f~q~n~~~~e~l~~~~~~~l--~~~~~~~VLDlgcG~G~~~~~la~~~---~~V~gvD~s~~al~~A~~n~~~ 330 (433)
T 1uwv_A 256 LTFSPRDFIQVNAGVNQKMVARALEWL--DVQPEDRVLDLFCGMGNFTLPLATQA---ASVVGVEGVPALVEKGQQNARL 330 (433)
T ss_dssp EECCSSSCCCSBHHHHHHHHHHHHHHH--TCCTTCEEEEESCTTTTTHHHHHTTS---SEEEEEESCHHHHHHHHHHHHH
T ss_pred EEECcccccccCHHHHHHHHHHHHHhh--cCCCCCEEEECCCCCCHHHHHHHhhC---CEEEEEeCCHHHHHHHHHHHHH
Confidence 344566788888888888889898888 67788999999999999999999984 7999999999999999999998
Q ss_pred CCCCccccCceEEEecCCCCC----CCCCCcccceec
Q psy7834 104 GNPEFVKDGRIKFVLGDGRKG----YLDEAPYDIIHV 136 (492)
Q Consensus 104 ~~~~~~~~~~v~~~~~d~~~~----~~~~~~~D~i~~ 136 (492)
+++ .+++|+++|+.+. ++.+++||+|++
T Consensus 331 ~~~-----~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~ 362 (433)
T 1uwv_A 331 NGL-----QNVTFYHENLEEDVTKQPWAKNGFDKVLL 362 (433)
T ss_dssp TTC-----CSEEEEECCTTSCCSSSGGGTTCCSEEEE
T ss_pred cCC-----CceEEEECCHHHHhhhhhhhcCCCCEEEE
Confidence 887 6899999999873 334568999976
No 244
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.26 E-value=7.4e-12 Score=122.22 Aligned_cols=107 Identities=23% Similarity=0.278 Sum_probs=82.6
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC-CcCCCCcc
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG-HAAEGPYD 287 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD 287 (492)
.+++.+|||||||+|.++..+++.. +..+|+++|+|+.|++.|++++...+......++++++.+|+.+. ....++||
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD 153 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYD 153 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEE
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCcc
Confidence 3566899999999999999999874 567899999999999999998764110000135899999998653 22357899
Q ss_pred EEEecCcchh-------------hHHHHHHHhccCCeEEEEe
Q psy7834 288 VIYVGGAVHH-------------YPFKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 288 ~i~s~~~~~~-------------~~~~~~~~L~pgG~l~~~~ 316 (492)
+|+++...++ +..++.++|||||++++..
T Consensus 154 ~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 154 VVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 9998876544 2348899999999999965
No 245
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.26 E-value=3.7e-11 Score=115.49 Aligned_cols=107 Identities=12% Similarity=0.138 Sum_probs=78.2
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHHhhCCCCCCC-----CcEEEEEccCCCCC---
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEH-IEDLVAQANKSMHTYYPNLMEG-----GRVQFVDGDGREGH--- 280 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~-s~~~l~~a~~~~~~~~~~~~~~-----~~v~~~~~d~~~~~--- 280 (492)
.++.+|||+|||+|.++..+++.. ..+|+|+|+ |+.|++.|++|+..+.....+. .++++...|..+..
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~--~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 155 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG--ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSL 155 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT--CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcC--CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHH
Confidence 568899999999999999998863 358999999 8999999999984321000011 36888866654321
Q ss_pred c---CCCCccEEEecCcchhhH------HHHHHHhc---c--CCeEEEEeCC
Q psy7834 281 A---AEGPYDVIYVGGAVHHYP------FKLMDQLK---P--GGVMWFTIGN 318 (492)
Q Consensus 281 ~---~~~~fD~i~s~~~~~~~~------~~~~~~L~---p--gG~l~~~~~~ 318 (492)
. ..++||+|++..++++.+ ..+.++|+ | ||++++.+.+
T Consensus 156 ~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 156 QRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTH 207 (281)
T ss_dssp HHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC
T ss_pred HhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEe
Confidence 1 356899999877776543 47889999 9 9998886543
No 246
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.26 E-value=2.6e-11 Score=116.51 Aligned_cols=107 Identities=22% Similarity=0.240 Sum_probs=88.3
Q ss_pred cccChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEE
Q psy7834 191 VMSSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQ 270 (492)
Q Consensus 191 ~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~ 270 (492)
.+..+.+.+.+++.+. +.++.+|||||||+|.+|..++++. .+|+|+|+|++|++.+++++.. .++++
T Consensus 32 fL~d~~i~~~Iv~~l~--~~~~~~VLEIG~G~G~lT~~La~~~---~~V~aVEid~~li~~a~~~~~~-------~~~v~ 99 (295)
T 3gru_A 32 FLIDKNFVNKAVESAN--LTKDDVVLEIGLGKGILTEELAKNA---KKVYVIEIDKSLEPYANKLKEL-------YNNIE 99 (295)
T ss_dssp EECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCGGGHHHHHHHHHH-------CSSEE
T ss_pred ccCCHHHHHHHHHhcC--CCCcCEEEEECCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHhcc-------CCCeE
Confidence 3466777888888775 6788999999999999999999873 4799999999999999999874 24799
Q ss_pred EEEccCCCCCcCCCCccEEEecCcchhhHHHHHHHhccC
Q psy7834 271 FVDGDGREGHAAEGPYDVIYVGGAVHHYPFKLMDQLKPG 309 (492)
Q Consensus 271 ~~~~d~~~~~~~~~~fD~i~s~~~~~~~~~~~~~~L~pg 309 (492)
++++|+.....++.+||+|+++..++....-+.++|+++
T Consensus 100 vi~gD~l~~~~~~~~fD~Iv~NlPy~is~pil~~lL~~~ 138 (295)
T 3gru_A 100 IIWGDALKVDLNKLDFNKVVANLPYQISSPITFKLIKRG 138 (295)
T ss_dssp EEESCTTTSCGGGSCCSEEEEECCGGGHHHHHHHHHHHC
T ss_pred EEECchhhCCcccCCccEEEEeCcccccHHHHHHHHhcc
Confidence 999999876666678999999988776666666777653
No 247
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.26 E-value=6.8e-12 Score=123.68 Aligned_cols=93 Identities=24% Similarity=0.444 Sum_probs=74.4
Q ss_pred cCCCCceEEEecc------ccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcC
Q psy7834 209 LKPGAKVLDIGSG------SGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAA 282 (492)
Q Consensus 209 ~~~~~~vLDiGcG------~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 282 (492)
..++.+||||||| +|..+..+++...+.++|+|+|+|+.|. . ..++++|+++|+.+.++.
T Consensus 214 ~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~------~~~rI~fv~GDa~dlpf~ 279 (419)
T 3sso_A 214 RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V------DELRIRTIQGDQNDAEFL 279 (419)
T ss_dssp TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G------CBTTEEEEECCTTCHHHH
T ss_pred cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h------cCCCcEEEEecccccchh
Confidence 3567899999999 7778888887766788999999999983 1 125799999999875544
Q ss_pred ------CCCccEEEecCcchhhH------HHHHHHhccCCeEEEEe
Q psy7834 283 ------EGPYDVIYVGGAVHHYP------FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 283 ------~~~fD~i~s~~~~~~~~------~~~~~~L~pgG~l~~~~ 316 (492)
+++||+|+++.. |+.. .+++++|||||++++..
T Consensus 280 ~~l~~~d~sFDlVisdgs-H~~~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 280 DRIARRYGPFDIVIDDGS-HINAHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp HHHHHHHCCEEEEEECSC-CCHHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hhhhcccCCccEEEECCc-ccchhHHHHHHHHHHhcCCCeEEEEEe
Confidence 589999999865 4443 37899999999999964
No 248
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.25 E-value=2.1e-11 Score=129.24 Aligned_cols=97 Identities=19% Similarity=0.163 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhh------cCCCCccccCceE
Q psy7834 42 QQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVI------SGNPEFVKDGRIK 115 (492)
Q Consensus 42 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~------~~~~~~~~~~~v~ 115 (492)
....+++.+ ...++.+|||||||+|.++..|++..++..+|+|+|+|+.|++.|++++. +.++ .+++
T Consensus 709 Rle~LLelL--~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-----~nVe 781 (950)
T 3htx_A 709 RVEYALKHI--RESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-----KSAT 781 (950)
T ss_dssp HHHHHHHHH--HHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-----SEEE
T ss_pred HHHHHHHHh--cccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-----CceE
Confidence 344556666 55688999999999999999999986455799999999999999998554 2344 6899
Q ss_pred EEecCCCCCCCCCCcccceeccCccccccc
Q psy7834 116 FVLGDGRKGYLDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 116 ~~~~d~~~~~~~~~~~D~i~~~~~~~~l~~ 145 (492)
|+++|+.++++.+++||+|++..+++++.+
T Consensus 782 fiqGDa~dLp~~d~sFDlVV~~eVLeHL~d 811 (950)
T 3htx_A 782 LYDGSILEFDSRLHDVDIGTCLEVIEHMEE 811 (950)
T ss_dssp EEESCTTSCCTTSCSCCEEEEESCGGGSCH
T ss_pred EEECchHhCCcccCCeeEEEEeCchhhCCh
Confidence 999999999988899999999999987765
No 249
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.25 E-value=2.7e-11 Score=117.31 Aligned_cols=86 Identities=20% Similarity=0.215 Sum_probs=77.1
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccc
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDI 133 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 133 (492)
+.++.+|||+|||+|.++..+++..+ .+|+|+|+|+.|++.|+++....++. .+++++++|+.++++++++||+
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~fD~ 153 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAGLA----DNITVKYGSFLEIPCEDNSYDF 153 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHTCT----TTEEEEECCTTSCSSCTTCEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCC----cceEEEEcCcccCCCCCCCEeE
Confidence 46788999999999999999999864 69999999999999999998877763 6899999999999988899999
Q ss_pred eeccCccccccc
Q psy7834 134 IHVGGSIEDIPE 145 (492)
Q Consensus 134 i~~~~~~~~l~~ 145 (492)
|++..+++++.+
T Consensus 154 v~~~~~l~~~~~ 165 (297)
T 2o57_A 154 IWSQDAFLHSPD 165 (297)
T ss_dssp EEEESCGGGCSC
T ss_pred EEecchhhhcCC
Confidence 999988887655
No 250
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.25 E-value=1.2e-11 Score=114.23 Aligned_cols=100 Identities=14% Similarity=0.075 Sum_probs=85.0
Q ss_pred hccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCc
Q psy7834 207 DYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPY 286 (492)
Q Consensus 207 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 286 (492)
..+.+..+|||||||+|-++..++... +..+|+++|+++.|++.+++++..++ .+.++.+.|....+ +.++|
T Consensus 128 ~~i~~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g------~~~~~~v~D~~~~~-p~~~~ 199 (281)
T 3lcv_B 128 RHLPRPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLN------VPHRTNVADLLEDR-LDEPA 199 (281)
T ss_dssp GGSCCCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTT------CCEEEEECCTTTSC-CCSCC
T ss_pred hccCCCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcC------CCceEEEeeecccC-CCCCc
Confidence 345667899999999999999988764 78899999999999999999998864 34789999986544 55789
Q ss_pred cEEEecCcchhhHH-------HHHHHhccCCeEEE
Q psy7834 287 DVIYVGGAVHHYPF-------KLMDQLKPGGVMWF 314 (492)
Q Consensus 287 D~i~s~~~~~~~~~-------~~~~~L~pgG~l~~ 314 (492)
|+++++-.+|++.+ ++++.|+|+|.++-
T Consensus 200 DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 200 DVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVT 234 (281)
T ss_dssp SEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEE
T ss_pred chHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEe
Confidence 99999999999976 68889999998764
No 251
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.25 E-value=2.3e-11 Score=116.90 Aligned_cols=90 Identities=26% Similarity=0.218 Sum_probs=78.3
Q ss_pred hhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEe
Q psy7834 39 SKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVL 118 (492)
Q Consensus 39 ~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 118 (492)
...+.+++++.+ .+.++++|||||||+|.++..|++.. .+|++||++++|++.++++... . +++++++
T Consensus 35 d~~i~~~Iv~~l--~~~~~~~VLEIG~G~G~lT~~La~~~---~~V~aVEid~~li~~a~~~~~~--~-----~~v~vi~ 102 (295)
T 3gru_A 35 DKNFVNKAVESA--NLTKDDVVLEIGLGKGILTEELAKNA---KKVYVIEIDKSLEPYANKLKEL--Y-----NNIEIIW 102 (295)
T ss_dssp CHHHHHHHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCGGGHHHHHHHHHH--C-----SSEEEEE
T ss_pred CHHHHHHHHHhc--CCCCcCEEEEECCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHhcc--C-----CCeEEEE
Confidence 334478888888 78889999999999999999999985 7999999999999999998863 2 6899999
Q ss_pred cCCCCCCCCCCcccceeccCcc
Q psy7834 119 GDGRKGYLDEAPYDIIHVGGSI 140 (492)
Q Consensus 119 ~d~~~~~~~~~~~D~i~~~~~~ 140 (492)
+|+.++++++.+||.|+++...
T Consensus 103 gD~l~~~~~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 103 GDALKVDLNKLDFNKVVANLPY 124 (295)
T ss_dssp SCTTTSCGGGSCCSEEEEECCG
T ss_pred CchhhCCcccCCccEEEEeCcc
Confidence 9999988877789999987554
No 252
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.25 E-value=9.9e-13 Score=133.91 Aligned_cols=100 Identities=21% Similarity=0.318 Sum_probs=75.8
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||||||+|.++..+++.. .+|+|+|+|+.|++.|+++-.. .....+...+....+.++++||+
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~g---~~v~gvD~s~~~~~~a~~~~~~-------~~~~~~~~~~~~~l~~~~~~fD~ 174 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEAG---VRHLGFEPSSGVAAKAREKGIR-------VRTDFFEKATADDVRRTEGPANV 174 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHTT---CEEEEECCCHHHHHHHHTTTCC-------EECSCCSHHHHHHHHHHHCCEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcC---CcEEEECCCHHHHHHHHHcCCC-------cceeeechhhHhhcccCCCCEEE
Confidence 4578899999999999999999863 3799999999999999875100 00011222333333344689999
Q ss_pred EEecCcchhhHH------HHHHHhccCCeEEEEeCC
Q psy7834 289 IYVGGAVHHYPF------KLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 289 i~s~~~~~~~~~------~~~~~L~pgG~l~~~~~~ 318 (492)
|++..+++|+++ ++.++|||||++++.++.
T Consensus 175 I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 175 IYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp EEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 999999999874 889999999999998764
No 253
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.25 E-value=1.2e-11 Score=120.86 Aligned_cols=108 Identities=20% Similarity=0.229 Sum_probs=82.4
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC-cCCCCcc
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH-AAEGPYD 287 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD 287 (492)
.+++.+|||||||+|.++..+++.. +..+|+++|+|+.+++.|++++...... ...++++++++|+.+.. ...++||
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~-~~~~~v~~~~~D~~~~l~~~~~~fD 191 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCG-YEDKRVNVFIEDASKFLENVTNTYD 191 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGG-GGSTTEEEEESCHHHHHHHCCSCEE
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccc-cCCCcEEEEEccHHHHHhhcCCCce
Confidence 3456899999999999999999764 5679999999999999999997641000 11357999999976522 2356899
Q ss_pred EEEecCcc----------hhhHHHHHHHhccCCeEEEEeCC
Q psy7834 288 VIYVGGAV----------HHYPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 288 ~i~s~~~~----------~~~~~~~~~~L~pgG~l~~~~~~ 318 (492)
+|+++... ..+.+++.+.|+|||++++....
T Consensus 192 vIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 192 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 99987632 23335889999999999997643
No 254
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.24 E-value=1.4e-11 Score=110.97 Aligned_cols=96 Identities=13% Similarity=0.050 Sum_probs=76.2
Q ss_pred hhHHHHHHHHHHHh-cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEe
Q psy7834 40 KFQQAMVLDDLSEE-LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVL 118 (492)
Q Consensus 40 ~~~~~~~~~~l~~~-~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 118 (492)
..+.+.+++++... ..++.+|||+|||+|.++..+++.. ..+|+|+|+|++|++.|+++++.+++ .++++++
T Consensus 27 ~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~v~~~~ 99 (189)
T 3p9n_A 27 DRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRG--AASVLFVESDQRSAAVIARNIEALGL-----SGATLRR 99 (189)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEECCHHHHHHHHHHHHHHTC-----SCEEEEE
T ss_pred HHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCC--CCeEEEEECCHHHHHHHHHHHHHcCC-----CceEEEE
Confidence 44455666666321 1578899999999999999888763 26899999999999999999988776 6899999
Q ss_pred cCCCCCC--CCCCcccceeccCcccc
Q psy7834 119 GDGRKGY--LDEAPYDIIHVGGSIED 142 (492)
Q Consensus 119 ~d~~~~~--~~~~~~D~i~~~~~~~~ 142 (492)
+|+.+.+ +++++||+|+++...+.
T Consensus 100 ~d~~~~~~~~~~~~fD~i~~~~p~~~ 125 (189)
T 3p9n_A 100 GAVAAVVAAGTTSPVDLVLADPPYNV 125 (189)
T ss_dssp SCHHHHHHHCCSSCCSEEEECCCTTS
T ss_pred ccHHHHHhhccCCCccEEEECCCCCc
Confidence 9998764 23689999999766543
No 255
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.24 E-value=3.1e-11 Score=122.33 Aligned_cols=113 Identities=19% Similarity=0.221 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEcc
Q psy7834 196 KVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGD 275 (492)
Q Consensus 196 ~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d 275 (492)
.....+.+.+.. +.++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|++|+..++ .. ++|+++|
T Consensus 276 ~~~e~l~~~~~~-~~~~~~VLDlgcG~G~~sl~la~~~---~~V~gvD~s~~ai~~A~~n~~~ng-----l~-v~~~~~d 345 (425)
T 2jjq_A 276 YQAVNLVRKVSE-LVEGEKILDMYSGVGTFGIYLAKRG---FNVKGFDSNEFAIEMARRNVEINN-----VD-AEFEVAS 345 (425)
T ss_dssp HHHHHHHHHHHH-HCCSSEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHT-----CC-EEEEECC
T ss_pred HHHHHHHHHhhc-cCCCCEEEEeeccchHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcC-----Cc-EEEEECC
Confidence 334444555544 5778899999999999999999863 379999999999999999998764 34 8999999
Q ss_pred CCCCCcCCCCccEEEecCcchhhHH---HHHHHhccCCeEEEEeCCCc
Q psy7834 276 GREGHAAEGPYDVIYVGGAVHHYPF---KLMDQLKPGGVMWFTIGNAE 320 (492)
Q Consensus 276 ~~~~~~~~~~fD~i~s~~~~~~~~~---~~~~~L~pgG~l~~~~~~~~ 320 (492)
+.+.... +||+|+++.....+.. +..+.|+|||.+++++.+.+
T Consensus 346 ~~~~~~~--~fD~Vv~dPPr~g~~~~~~~~l~~l~p~givyvsc~p~t 391 (425)
T 2jjq_A 346 DREVSVK--GFDTVIVDPPRAGLHPRLVKRLNREKPGVIVYVSCNPET 391 (425)
T ss_dssp TTTCCCT--TCSEEEECCCTTCSCHHHHHHHHHHCCSEEEEEESCHHH
T ss_pred hHHcCcc--CCCEEEEcCCccchHHHHHHHHHhcCCCcEEEEECChHH
Confidence 9775432 8999999876432222 33456899999999986544
No 256
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.24 E-value=1.1e-11 Score=120.55 Aligned_cols=107 Identities=23% Similarity=0.206 Sum_probs=81.8
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC-cCCCCcc
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH-AAEGPYD 287 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD 287 (492)
.+++.+|||||||+|.++..+++.. +..+|+++|+|+.+++.|++++...... ...++++++.+|+.+.. ...++||
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~-~~~~rv~~~~~D~~~~l~~~~~~fD 183 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCG-FSHPKLDLFCGDGFEFLKNHKNEFD 183 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGG-GGCTTEEEECSCHHHHHHHCTTCEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccc-cCCCCEEEEEChHHHHHHhcCCCce
Confidence 3456899999999999999999874 5679999999999999999997642100 01358999999986532 2357899
Q ss_pred EEEecCcc----------hhhHHHHHHHhccCCeEEEEeC
Q psy7834 288 VIYVGGAV----------HHYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 288 ~i~s~~~~----------~~~~~~~~~~L~pgG~l~~~~~ 317 (492)
+|+++... ..+..++.++|+|||++++..+
T Consensus 184 ~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 184 VIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE 223 (314)
T ss_dssp EEEECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECC
Confidence 99987643 2333588999999999999763
No 257
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.24 E-value=1.2e-11 Score=113.62 Aligned_cols=80 Identities=21% Similarity=0.292 Sum_probs=68.3
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
.+.++.+|||||||+|++++.+++.. +..+|+|+|+++.+++.|++|++.+++. +++++.++|+.+...+.++||
T Consensus 12 ~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~----~~i~~~~~d~l~~l~~~~~~D 86 (225)
T 3kr9_A 12 FVSQGAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAHGLK----EKIQVRLANGLAAFEETDQVS 86 (225)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCT----TTEEEEECSGGGGCCGGGCCC
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCC----ceEEEEECchhhhcccCcCCC
Confidence 56688999999999999999999984 5579999999999999999999999984 679999999865432233799
Q ss_pred ceecc
Q psy7834 133 IIHVG 137 (492)
Q Consensus 133 ~i~~~ 137 (492)
+|+.+
T Consensus 87 ~Ivia 91 (225)
T 3kr9_A 87 VITIA 91 (225)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99864
No 258
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.24 E-value=2e-11 Score=108.84 Aligned_cols=87 Identities=22% Similarity=0.360 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCC
Q psy7834 42 QQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDG 121 (492)
Q Consensus 42 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 121 (492)
+.+.+++.+ ...++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.|+++...+++ .+++++++|+
T Consensus 23 ~~~~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~d~ 92 (183)
T 2yxd_A 23 IRAVSIGKL--NLNKDDVVVDVGCGSGGMTVEIAKRC---KFVYAIDYLDGAIEVTKQNLAKFNI-----KNCQIIKGRA 92 (183)
T ss_dssp HHHHHHHHH--CCCTTCEEEEESCCCSHHHHHHHTTS---SEEEEEECSHHHHHHHHHHHHHTTC-----CSEEEEESCH
T ss_pred HHHHHHHHc--CCCCCCEEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHHHHHcCC-----CcEEEEECCc
Confidence 356677776 67788999999999999999999932 7999999999999999999988887 6899999998
Q ss_pred CCCCCCCCcccceeccCc
Q psy7834 122 RKGYLDEAPYDIIHVGGS 139 (492)
Q Consensus 122 ~~~~~~~~~~D~i~~~~~ 139 (492)
.+ ++++++||+|+++..
T Consensus 93 ~~-~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 93 ED-VLDKLEFNKAFIGGT 109 (183)
T ss_dssp HH-HGGGCCCSEEEECSC
T ss_pred cc-cccCCCCcEEEECCc
Confidence 87 566678999998544
No 259
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.24 E-value=2.7e-11 Score=117.65 Aligned_cols=90 Identities=22% Similarity=0.228 Sum_probs=76.8
Q ss_pred HHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC
Q psy7834 45 MVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG 124 (492)
Q Consensus 45 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 124 (492)
.+++.+ .+.++.+|||||||+|.++..+++..+ .+|+|+|+|++|++.|+++....++. .+++++++|+.++
T Consensus 63 ~~~~~~--~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~ 134 (302)
T 3hem_A 63 LALDKL--NLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSP----RRKEVRIQGWEEF 134 (302)
T ss_dssp HHHHTT--CCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCS----SCEEEEECCGGGC
T ss_pred HHHHHc--CCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCC----CceEEEECCHHHc
Confidence 344444 567889999999999999999999865 79999999999999999999888873 5899999999876
Q ss_pred CCCCCcccceeccCccccccc
Q psy7834 125 YLDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 125 ~~~~~~~D~i~~~~~~~~l~~ 145 (492)
+++||+|++..+++++++
T Consensus 135 ---~~~fD~v~~~~~~~~~~d 152 (302)
T 3hem_A 135 ---DEPVDRIVSLGAFEHFAD 152 (302)
T ss_dssp ---CCCCSEEEEESCGGGTTC
T ss_pred ---CCCccEEEEcchHHhcCc
Confidence 689999999877765543
No 260
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.23 E-value=4.1e-11 Score=122.29 Aligned_cols=104 Identities=21% Similarity=0.252 Sum_probs=81.5
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC----cCCC
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH----AAEG 284 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~ 284 (492)
+.++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|++|+..++ ..+++|+++|+.+.. ..++
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~-----~~~v~f~~~d~~~~l~~~~~~~~ 355 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNG-----LQNVTFYHENLEEDVTKQPWAKN 355 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEECCTTSCCSSSGGGTT
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcC-----CCceEEEECCHHHHhhhhhhhcC
Confidence 456789999999999999999986 3589999999999999999998764 358999999997632 2346
Q ss_pred CccEEEecCcchhhHH--HHHHHhccCCeEEEEeCCCc
Q psy7834 285 PYDVIYVGGAVHHYPF--KLMDQLKPGGVMWFTIGNAE 320 (492)
Q Consensus 285 ~fD~i~s~~~~~~~~~--~~~~~L~pgG~l~~~~~~~~ 320 (492)
+||+|+++.......+ +....++|++.+++++.+.+
T Consensus 356 ~fD~Vv~dPPr~g~~~~~~~l~~~~p~~ivyvsc~p~t 393 (433)
T 1uwv_A 356 GFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPAT 393 (433)
T ss_dssp CCSEEEECCCTTCCHHHHHHHHHHCCSEEEEEESCHHH
T ss_pred CCCEEEECCCCccHHHHHHHHHhcCCCeEEEEECChHH
Confidence 8999999876543332 22233689999999886544
No 261
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.23 E-value=2.7e-11 Score=111.99 Aligned_cols=81 Identities=21% Similarity=0.279 Sum_probs=69.5
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC---CCCCCC
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK---GYLDEA 129 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~---~~~~~~ 129 (492)
.+++|++|||+|||+|+++..+|+.+|++++|+|+|++++|++.+++++++. .|+..+.+|... .+...+
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~-------~ni~~V~~d~~~p~~~~~~~~ 146 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR-------RNIFPILGDARFPEKYRHLVE 146 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC-------TTEEEEESCTTCGGGGTTTCC
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh-------cCeeEEEEeccCccccccccc
Confidence 6899999999999999999999999999999999999999999999988663 589999999865 334567
Q ss_pred cccceeccCcc
Q psy7834 130 PYDIIHVGGSI 140 (492)
Q Consensus 130 ~~D~i~~~~~~ 140 (492)
++|+|++....
T Consensus 147 ~vDvVf~d~~~ 157 (233)
T 4df3_A 147 GVDGLYADVAQ 157 (233)
T ss_dssp CEEEEEECCCC
T ss_pred eEEEEEEeccC
Confidence 89998764433
No 262
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.22 E-value=2e-11 Score=110.21 Aligned_cols=99 Identities=18% Similarity=0.190 Sum_probs=72.5
Q ss_pred HHHHHHHh--ccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCC
Q psy7834 200 QALEILKD--YLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGR 277 (492)
Q Consensus 200 ~~~~~l~~--~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 277 (492)
++++.+.. .++++.+|||+|||+|.++..++++ .++|+|+|+++.. ...+++++++|+.
T Consensus 12 KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~----------------~~~~v~~~~~D~~ 72 (191)
T 3dou_A 12 KLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME----------------EIAGVRFIRCDIF 72 (191)
T ss_dssp HHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC----------------CCTTCEEEECCTT
T ss_pred HHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc----------------cCCCeEEEEcccc
Confidence 34444433 2578999999999999999999987 5689999999741 1247899999987
Q ss_pred CCCcC-------C----CCccEEEecCcch-----------------hhHHHHHHHhccCCeEEEEeC
Q psy7834 278 EGHAA-------E----GPYDVIYVGGAVH-----------------HYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 278 ~~~~~-------~----~~fD~i~s~~~~~-----------------~~~~~~~~~L~pgG~l~~~~~ 317 (492)
+.... . ++||+|+|+.... .+.+.+.++|||||+|++.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 73 KETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp SSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 64311 1 4899999975421 111356799999999998664
No 263
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.22 E-value=7.7e-11 Score=107.90 Aligned_cols=96 Identities=14% Similarity=0.044 Sum_probs=80.0
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEE
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVI 289 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i 289 (492)
.++.+|||||||+|-++..+. +..+++|+|+|+.|++.+++++..++ .+.++..+|....+. .++||+|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g------~~~~~~v~D~~~~~~-~~~~Dvv 172 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKD------WDFTFALQDVLCAPP-AEAGDLA 172 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTT------CEEEEEECCTTTSCC-CCBCSEE
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcC------CCceEEEeecccCCC-CCCcchH
Confidence 567899999999999998876 56799999999999999999988753 578999999876554 4589999
Q ss_pred EecCcchhhHH-------HHHHHhccCCeEEEEeC
Q psy7834 290 YVGGAVHHYPF-------KLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 290 ~s~~~~~~~~~-------~~~~~L~pgG~l~~~~~ 317 (492)
++.-++|++.+ ++.+.|+++|.++ +++
T Consensus 173 Lllk~lh~LE~q~~~~~~~ll~aL~~~~vvV-sfP 206 (253)
T 3frh_A 173 LIFKLLPLLEREQAGSAMALLQSLNTPRMAV-SFP 206 (253)
T ss_dssp EEESCHHHHHHHSTTHHHHHHHHCBCSEEEE-EEE
T ss_pred HHHHHHHHhhhhchhhHHHHHHHhcCCCEEE-EcC
Confidence 99999998875 7788899986554 444
No 264
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.22 E-value=3.7e-12 Score=123.57 Aligned_cols=98 Identities=17% Similarity=0.093 Sum_probs=70.5
Q ss_pred ccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeC----CHHHHHHHHHHHHhhCCCCCCCCcEEEEEc-cCCCCCcC
Q psy7834 208 YLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEH----IEDLVAQANKSMHTYYPNLMEGGRVQFVDG-DGREGHAA 282 (492)
Q Consensus 208 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~----s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~-d~~~~~~~ 282 (492)
.++++.+|||+|||+|.++..++++ ++|+|+|+ ++.+++.++ .+. .+.+++.++++ |+...+
T Consensus 79 ~~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~--~~~-----~~~~~v~~~~~~D~~~l~-- 145 (305)
T 2p41_A 79 LVTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP--MST-----YGWNLVRLQSGVDVFFIP-- 145 (305)
T ss_dssp SSCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC--CCS-----TTGGGEEEECSCCTTTSC--
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH--hhh-----cCCCCeEEEeccccccCC--
Confidence 3577899999999999999999986 36999999 665442211 111 01247999999 887643
Q ss_pred CCCccEEEecCcch---hh---------HHHHHHHhccCCeEEEEeCC
Q psy7834 283 EGPYDVIYVGGAVH---HY---------PFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 283 ~~~fD~i~s~~~~~---~~---------~~~~~~~L~pgG~l~~~~~~ 318 (492)
.++||+|+|+.+.+ +. ...+.++|||||.+++.+..
T Consensus 146 ~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 146 PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESC
T ss_pred cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 46899999987642 22 23567999999999986543
No 265
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.22 E-value=2.2e-11 Score=122.28 Aligned_cols=105 Identities=15% Similarity=0.061 Sum_probs=81.8
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCC-cEEEEEccCCCCCc----CCC
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGG-RVQFVDGDGREGHA----AEG 284 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~-~v~~~~~d~~~~~~----~~~ 284 (492)
.++.+|||+|||+|.++..+|+.. ..+|+|+|+|+.|++.|++|++.++. .. +++++++|+.+... ..+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~n~~----~~~~v~~~~~D~~~~l~~~~~~~~ 284 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEANHL----DMANHQLVVMDVFDYFKYARRHHL 284 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHHTTC----CCTTEEEEESCHHHHHHHHHHTTC
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCC----CccceEEEECCHHHHHHHHHHhCC
Confidence 678899999999999999999863 34899999999999999999988641 22 79999999865321 135
Q ss_pred CccEEEecCcch-----h----------hHHHHHHHhccCCeEEEEeCCCc
Q psy7834 285 PYDVIYVGGAVH-----H----------YPFKLMDQLKPGGVMWFTIGNAE 320 (492)
Q Consensus 285 ~fD~i~s~~~~~-----~----------~~~~~~~~L~pgG~l~~~~~~~~ 320 (492)
+||+|+++.... . +...+.+.|+|||.+++++.+..
T Consensus 285 ~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 285 TYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp CEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 899999864331 1 12355799999999999876544
No 266
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.22 E-value=2.8e-11 Score=111.35 Aligned_cols=82 Identities=21% Similarity=0.225 Sum_probs=71.7
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
...++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++.... .+++++++|+.+.+ ++++||
T Consensus 48 ~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~~~-~~~~fD 116 (216)
T 3ofk_A 48 SSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRW-------SHISWAATDILQFS-TAELFD 116 (216)
T ss_dssp TTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTC-------SSEEEEECCTTTCC-CSCCEE
T ss_pred ccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccC-------CCeEEEEcchhhCC-CCCCcc
Confidence 45567899999999999999999986 79999999999999999988653 57999999999987 578999
Q ss_pred ceeccCccccccc
Q psy7834 133 IIHVGGSIEDIPE 145 (492)
Q Consensus 133 ~i~~~~~~~~l~~ 145 (492)
+|+++.+++++.+
T Consensus 117 ~v~~~~~l~~~~~ 129 (216)
T 3ofk_A 117 LIVVAEVLYYLED 129 (216)
T ss_dssp EEEEESCGGGSSS
T ss_pred EEEEccHHHhCCC
Confidence 9999888876553
No 267
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.22 E-value=7.8e-11 Score=108.39 Aligned_cols=79 Identities=22% Similarity=0.259 Sum_probs=70.2
Q ss_pred CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC--CCCCccc
Q psy7834 55 TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY--LDEAPYD 132 (492)
Q Consensus 55 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~D 132 (492)
.++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.|++++..+++ .+++++++|+.+++ +++++||
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~~~D 113 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGV-----PNIKLLWVDGSDLTDYFEDGEID 113 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCC-----SSEEEEECCSSCGGGTSCTTCCS
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCC-----CCEEEEeCCHHHHHhhcCCCCCC
Confidence 457899999999999999999986 558999999999999999999988776 68999999998876 5678899
Q ss_pred ceeccCc
Q psy7834 133 IIHVGGS 139 (492)
Q Consensus 133 ~i~~~~~ 139 (492)
+|+++..
T Consensus 114 ~i~~~~~ 120 (214)
T 1yzh_A 114 RLYLNFS 120 (214)
T ss_dssp EEEEESC
T ss_pred EEEEECC
Confidence 9998754
No 268
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.22 E-value=2.5e-11 Score=116.21 Aligned_cols=88 Identities=23% Similarity=0.301 Sum_probs=78.7
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
.+.++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.|+++....++ ++++++++|+.++++++++||
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~fD 107 (276)
T 3mgg_A 34 VYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGI-----KNVKFLQANIFSLPFEDSSFD 107 (276)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEECCGGGCCSCTTCEE
T ss_pred cCCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEcccccCCCCCCCee
Confidence 45688999999999999999999985 558999999999999999999988877 689999999999988889999
Q ss_pred ceeccCcccccccc
Q psy7834 133 IIHVGGSIEDIPEG 146 (492)
Q Consensus 133 ~i~~~~~~~~l~~~ 146 (492)
+|++..+++++.+.
T Consensus 108 ~v~~~~~l~~~~~~ 121 (276)
T 3mgg_A 108 HIFVCFVLEHLQSP 121 (276)
T ss_dssp EEEEESCGGGCSCH
T ss_pred EEEEechhhhcCCH
Confidence 99999888776543
No 269
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.21 E-value=3.2e-11 Score=114.55 Aligned_cols=90 Identities=30% Similarity=0.372 Sum_probs=77.5
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
...+++.+ .+.++.+|||+|||+|.++..+++..+ .+|+|+|+|+.|++.|+++.... .+++++++|+.
T Consensus 44 ~~~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~ 112 (266)
T 3ujc_A 44 TKKILSDI--ELNENSKVLDIGSGLGGGCMYINEKYG--AHTHGIDICSNIVNMANERVSGN-------NKIIFEANDIL 112 (266)
T ss_dssp HHHHTTTC--CCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHTCCSC-------TTEEEEECCTT
T ss_pred HHHHHHhc--CCCCCCEEEEECCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhhcC-------CCeEEEECccc
Confidence 34455555 667889999999999999999999864 79999999999999999987553 47999999999
Q ss_pred CCCCCCCcccceeccCccccc
Q psy7834 123 KGYLDEAPYDIIHVGGSIEDI 143 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~~~~~~l 143 (492)
+.++++++||+|++..+++++
T Consensus 113 ~~~~~~~~fD~v~~~~~l~~~ 133 (266)
T 3ujc_A 113 TKEFPENNFDLIYSRDAILAL 133 (266)
T ss_dssp TCCCCTTCEEEEEEESCGGGS
T ss_pred cCCCCCCcEEEEeHHHHHHhc
Confidence 998888999999999888776
No 270
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.21 E-value=3.5e-11 Score=112.84 Aligned_cols=81 Identities=21% Similarity=0.106 Sum_probs=71.6
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccc
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDI 133 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 133 (492)
..++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|++++..+++. .+++++++|+.+.+ ++++||+
T Consensus 76 ~~~~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~-~~~~~D~ 147 (241)
T 3gdh_A 76 SFKCDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGIA----DKIEFICGDFLLLA-SFLKADV 147 (241)
T ss_dssp HSCCSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHG-GGCCCSE
T ss_pred ccCCCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCC----cCeEEEECChHHhc-ccCCCCE
Confidence 3478999999999999999999985 89999999999999999999988873 58999999998876 5679999
Q ss_pred eeccCcccc
Q psy7834 134 IHVGGSIED 142 (492)
Q Consensus 134 i~~~~~~~~ 142 (492)
|+++.+.+.
T Consensus 148 v~~~~~~~~ 156 (241)
T 3gdh_A 148 VFLSPPWGG 156 (241)
T ss_dssp EEECCCCSS
T ss_pred EEECCCcCC
Confidence 999877654
No 271
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.21 E-value=1.8e-11 Score=121.46 Aligned_cols=97 Identities=18% Similarity=0.211 Sum_probs=76.0
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||||||+|.++..+++.. +..+++++|+ +.++. +++.+..+ ..++++++.+|+.+ +.+ +||+
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~--~~~~~~~~----~~~~v~~~~~d~~~-~~p--~~D~ 250 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDR-AEVVA--RHRLDAPD----VAGRWKVVEGDFLR-EVP--HADV 250 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEEC-HHHHT--TCCCCCGG----GTTSEEEEECCTTT-CCC--CCSE
T ss_pred ccCCceEEEECCccCHHHHHHHHHC-CCCEEEEecC-HHHhh--cccccccC----CCCCeEEEecCCCC-CCC--CCcE
Confidence 4567899999999999999999987 7789999999 45554 32222211 23579999999963 223 8999
Q ss_pred EEecCcchhhHH--------HHHHHhccCCeEEEEe
Q psy7834 289 IYVGGAVHHYPF--------KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 289 i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~ 316 (492)
|++..++|++++ ++.++|||||++++..
T Consensus 251 v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 251 HVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred EEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999999988764 6889999999999864
No 272
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.20 E-value=2.1e-11 Score=112.82 Aligned_cols=87 Identities=11% Similarity=0.141 Sum_probs=71.7
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC-CCCC---
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG-YLDE--- 128 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~--- 128 (492)
...++.+|||+|||+|..+..+++..++.++|+++|+++.|++.|+++++..++. ++++++++|+.+. +...
T Consensus 55 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~l~~~~~~~ 130 (221)
T 3u81_A 55 REYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQ----DKVTILNGASQDLIPQLKKKY 130 (221)
T ss_dssp HHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG----GGEEEEESCHHHHGGGTTTTS
T ss_pred HhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCC----CceEEEECCHHHHHHHHHHhc
Confidence 4457889999999999999999997655689999999999999999999888873 5799999998553 2212
Q ss_pred --CcccceeccCccccc
Q psy7834 129 --APYDIIHVGGSIEDI 143 (492)
Q Consensus 129 --~~~D~i~~~~~~~~l 143 (492)
++||+|++....+..
T Consensus 131 ~~~~fD~V~~d~~~~~~ 147 (221)
T 3u81_A 131 DVDTLDMVFLDHWKDRY 147 (221)
T ss_dssp CCCCCSEEEECSCGGGH
T ss_pred CCCceEEEEEcCCcccc
Confidence 689999997765543
No 273
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.20 E-value=6.4e-11 Score=114.88 Aligned_cols=86 Identities=16% Similarity=0.147 Sum_probs=73.8
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcC-CCCccccCceEEEecCCCCCCCCC----
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISG-NPEFVKDGRIKFVLGDGRKGYLDE---- 128 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~-~~~~~~~~~v~~~~~d~~~~~~~~---- 128 (492)
..++.+|||+|||+|.++..+++..++..+|+|+|+|+.|++.|+++.... +.. .+++++++|++++++..
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~ 109 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTY----KNVSFKISSSDDFKFLGADSV 109 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CC----TTEEEEECCTTCCGGGCTTTT
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCC----CceEEEEcCHHhCCccccccc
Confidence 457899999999999999999986534589999999999999999998775 221 68999999999988776
Q ss_pred --CcccceeccCccccc
Q psy7834 129 --APYDIIHVGGSIEDI 143 (492)
Q Consensus 129 --~~~D~i~~~~~~~~l 143 (492)
++||+|++..+++++
T Consensus 110 ~~~~fD~V~~~~~l~~~ 126 (299)
T 3g5t_A 110 DKQKIDMITAVECAHWF 126 (299)
T ss_dssp TSSCEEEEEEESCGGGS
T ss_pred cCCCeeEEeHhhHHHHh
Confidence 799999998887765
No 274
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.20 E-value=4.7e-11 Score=117.69 Aligned_cols=98 Identities=17% Similarity=0.224 Sum_probs=81.7
Q ss_pred ccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCcc
Q psy7834 208 YLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYD 287 (492)
Q Consensus 208 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 287 (492)
.+.++.+|||+|||+|.++.. ++ ...+|+|+|+|+.+++.|++|+..++ ...+++++++|+.+.. ++||
T Consensus 192 ~~~~~~~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~----l~~~v~~~~~D~~~~~---~~fD 260 (336)
T 2yx1_A 192 KVSLNDVVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNK----LEHKIIPILSDVREVD---VKGN 260 (336)
T ss_dssp HCCTTCEEEETTCTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEESCGGGCC---CCEE
T ss_pred hcCCCCEEEEccCccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEECChHHhc---CCCc
Confidence 356889999999999999999 76 25689999999999999999998864 1247999999997654 7899
Q ss_pred EEEecCc--chhhHHHHHHHhccCCeEEEEe
Q psy7834 288 VIYVGGA--VHHYPFKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 288 ~i~s~~~--~~~~~~~~~~~L~pgG~l~~~~ 316 (492)
+|+++.. ...+.+.+.+.|+|||.+++..
T Consensus 261 ~Vi~dpP~~~~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 261 RVIMNLPKFAHKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp EEEECCTTTGGGGHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCcHhHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999843 2455678999999999988853
No 275
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.20 E-value=3.1e-11 Score=121.07 Aligned_cols=103 Identities=17% Similarity=0.265 Sum_probs=78.5
Q ss_pred HHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc-CC
Q psy7834 205 LKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA-AE 283 (492)
Q Consensus 205 l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~ 283 (492)
+....++|.+|||+|||+|.++..+++.. . +|+++|+|+.|++.|++|++.++. . .++.++|+.+... ..
T Consensus 208 l~~~~~~g~~VLDlg~GtG~~sl~~a~~g-a--~V~avDis~~al~~a~~n~~~ng~-----~-~~~~~~D~~~~l~~~~ 278 (393)
T 4dmg_A 208 FEAMVRPGERVLDVYSYVGGFALRAARKG-A--YALAVDKDLEALGVLDQAALRLGL-----R-VDIRHGEALPTLRGLE 278 (393)
T ss_dssp HHTTCCTTCEEEEESCTTTHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHHTC-----C-CEEEESCHHHHHHTCC
T ss_pred HHHHhcCCCeEEEcccchhHHHHHHHHcC-C--eEEEEECCHHHHHHHHHHHHHhCC-----C-CcEEEccHHHHHHHhc
Confidence 33345669999999999999999999863 3 499999999999999999988752 1 3566889765321 13
Q ss_pred CCccEEEecCcc---------------hhhHHHHHHHhccCCeEEEEe
Q psy7834 284 GPYDVIYVGGAV---------------HHYPFKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 284 ~~fD~i~s~~~~---------------~~~~~~~~~~L~pgG~l~~~~ 316 (492)
+.||+|+++... ..+...+.++|+|||+|++..
T Consensus 279 ~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s 326 (393)
T 4dmg_A 279 GPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSS 326 (393)
T ss_dssp CCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 449999998653 123347789999999999654
No 276
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.20 E-value=4.5e-11 Score=108.26 Aligned_cols=90 Identities=19% Similarity=0.141 Sum_probs=77.1
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
..+++.+ ...++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.|+++....++ .+++++++|+.+
T Consensus 22 ~~l~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~d~~~ 91 (199)
T 2xvm_A 22 SEVLEAV--KVVKPGKTLDLGCGNGRNSLYLAANG---YDVDAWDKNAMSIANVERIKSIENL-----DNLHTRVVDLNN 91 (199)
T ss_dssp HHHHHHT--TTSCSCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTC-----TTEEEEECCGGG
T ss_pred HHHHHHh--hccCCCeEEEEcCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHhCCC-----CCcEEEEcchhh
Confidence 3455666 55678899999999999999999984 7999999999999999999877765 579999999998
Q ss_pred CCCCCCcccceeccCcccccc
Q psy7834 124 GYLDEAPYDIIHVGGSIEDIP 144 (492)
Q Consensus 124 ~~~~~~~~D~i~~~~~~~~l~ 144 (492)
.++ +++||+|++..+++++.
T Consensus 92 ~~~-~~~~D~v~~~~~l~~~~ 111 (199)
T 2xvm_A 92 LTF-DRQYDFILSTVVLMFLE 111 (199)
T ss_dssp CCC-CCCEEEEEEESCGGGSC
T ss_pred CCC-CCCceEEEEcchhhhCC
Confidence 877 78999999988877654
No 277
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.20 E-value=3.9e-11 Score=122.34 Aligned_cols=114 Identities=19% Similarity=0.303 Sum_probs=87.8
Q ss_pred ChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEE
Q psy7834 194 SPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVD 273 (492)
Q Consensus 194 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~ 273 (492)
+......+...+. ..++.+|||+|||+|..+..+++.. +.++|+|+|+|+.+++.+++++.+.+ . ++++++
T Consensus 231 qd~~s~~~~~~l~--~~~g~~VLDlgaG~G~~t~~la~~~-~~~~v~a~D~~~~~l~~~~~~~~~~g-----~-~~~~~~ 301 (429)
T 1sqg_A 231 QDASAQGCMTWLA--PQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLG-----M-KATVKQ 301 (429)
T ss_dssp CCHHHHTHHHHHC--CCTTCEEEEESCTTCHHHHHHHHHC-TTCEEEEEESSTTTHHHHHHHHHHTT-----C-CCEEEE
T ss_pred eCHHHHHHHHHcC--CCCcCeEEEECCCchHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHHcC-----C-CeEEEe
Confidence 4344444455554 6788999999999999999999987 45899999999999999999998864 2 478999
Q ss_pred ccCCCCC--cCCCCccEEEecCcc------h----------------------hhHHHHHHHhccCCeEEEEe
Q psy7834 274 GDGREGH--AAEGPYDVIYVGGAV------H----------------------HYPFKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 274 ~d~~~~~--~~~~~fD~i~s~~~~------~----------------------~~~~~~~~~L~pgG~l~~~~ 316 (492)
+|+.... ...++||+|+++... + .+.+++.+.|||||+|++++
T Consensus 302 ~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp CCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9987653 234689999975421 1 22346778999999999975
No 278
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.20 E-value=1.8e-12 Score=120.77 Aligned_cols=111 Identities=23% Similarity=0.187 Sum_probs=70.0
Q ss_pred HHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEE-ccCC
Q psy7834 199 AQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVD-GDGR 277 (492)
Q Consensus 199 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~-~d~~ 277 (492)
..+++.+. ...++.+|||||||||.++..+++.. ..+|+|+|+|+.|++.|+++..+... ....++.+.. .|+.
T Consensus 26 ~~~L~~~~-~~~~g~~VLDiGcGtG~~t~~la~~g--~~~V~gvDis~~ml~~a~~~~~~~~~--~~~~~~~~~~~~~~~ 100 (232)
T 3opn_A 26 EKALKEFH-LEINGKTCLDIGSSTGGFTDVMLQNG--AKLVYALDVGTNQLAWKIRSDERVVV--MEQFNFRNAVLADFE 100 (232)
T ss_dssp HHHHHHTT-CCCTTCEEEEETCTTSHHHHHHHHTT--CSEEEEECSSCCCCCHHHHTCTTEEE--ECSCCGGGCCGGGCC
T ss_pred HHHHHHcC-CCCCCCEEEEEccCCCHHHHHHHhcC--CCEEEEEcCCHHHHHHHHHhCccccc--cccceEEEeCHhHcC
Confidence 34444443 12346799999999999999999873 34899999999999998775432100 0001222222 2222
Q ss_pred CCCcCCCCccEEEecCcchhhHHHHHHHhccCCeEEEEe
Q psy7834 278 EGHAAEGPYDVIYVGGAVHHYPFKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 278 ~~~~~~~~fD~i~s~~~~~~~~~~~~~~L~pgG~l~~~~ 316 (492)
...+....||+++++. ..+..++.++|||||++++.+
T Consensus 101 ~~~~d~~~~D~v~~~l--~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 101 QGRPSFTSIDVSFISL--DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp SCCCSEEEECCSSSCG--GGTHHHHHHHSCTTCEEEEEE
T ss_pred cCCCCEEEEEEEhhhH--HHHHHHHHHhccCCCEEEEEE
Confidence 1112223455554432 556679999999999999965
No 279
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.20 E-value=3.6e-11 Score=121.35 Aligned_cols=106 Identities=15% Similarity=0.135 Sum_probs=83.7
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcC----CCC
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAA----EGP 285 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~----~~~ 285 (492)
.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|++|+..++. ...+++++++|+.+.... .++
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl---~~~~v~~~~~D~~~~~~~~~~~~~~ 293 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKL---DLSKAEFVRDDVFKLLRTYRDRGEK 293 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTC---CGGGEEEEESCHHHHHHHHHHTTCC
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCC---CccceEEEECCHHHHHHHHHhcCCC
Confidence 578899999999999999999863 45899999999999999999988641 012799999998654321 468
Q ss_pred ccEEEecCcc---------------hhhHHHHHHHhccCCeEEEEeCCCc
Q psy7834 286 YDVIYVGGAV---------------HHYPFKLMDQLKPGGVMWFTIGNAE 320 (492)
Q Consensus 286 fD~i~s~~~~---------------~~~~~~~~~~L~pgG~l~~~~~~~~ 320 (492)
||+|+++... ..+..++.+.|+|||++++++.+..
T Consensus 294 fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 294 FDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp EEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 9999998532 2233478899999999999876543
No 280
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.20 E-value=2.4e-11 Score=110.84 Aligned_cols=92 Identities=15% Similarity=0.094 Sum_probs=73.7
Q ss_pred hhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEec
Q psy7834 40 KFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLG 119 (492)
Q Consensus 40 ~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 119 (492)
..+...+++++... .++.+|||+|||+|.++..++.... .+|+++|+|+.|++.|+++++.+++ .+++++++
T Consensus 39 ~~~~~~l~~~l~~~-~~~~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~~-----~~v~~~~~ 110 (202)
T 2fpo_A 39 DRVRETLFNWLAPV-IVDAQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLKA-----GNARVVNS 110 (202)
T ss_dssp HHHHHHHHHHHHHH-HTTCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTC-----CSEEEECS
T ss_pred HHHHHHHHHHHHhh-cCCCeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEEC
Confidence 44555666666211 2678999999999999998877642 5999999999999999999988876 68999999
Q ss_pred CCCC-CCCCCCcccceeccCc
Q psy7834 120 DGRK-GYLDEAPYDIIHVGGS 139 (492)
Q Consensus 120 d~~~-~~~~~~~~D~i~~~~~ 139 (492)
|+.+ ++...++||+|+++..
T Consensus 111 D~~~~~~~~~~~fD~V~~~~p 131 (202)
T 2fpo_A 111 NAMSFLAQKGTPHNIVFVDPP 131 (202)
T ss_dssp CHHHHHSSCCCCEEEEEECCS
T ss_pred CHHHHHhhcCCCCCEEEECCC
Confidence 9877 3445678999998654
No 281
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.20 E-value=5.7e-11 Score=111.22 Aligned_cols=90 Identities=21% Similarity=0.306 Sum_probs=75.8
Q ss_pred HHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC
Q psy7834 46 VLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY 125 (492)
Q Consensus 46 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 125 (492)
+++.+...+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|+++... .+++++++|+.+++
T Consensus 43 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~~ 111 (242)
T 3l8d_A 43 IIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTG---YKAVGVDISEVMIQKGKERGEG--------PDLSFIKGDLSSLP 111 (242)
T ss_dssp HHHHHHHHSCTTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHTTTCB--------TTEEEEECBTTBCS
T ss_pred HHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhccc--------CCceEEEcchhcCC
Confidence 344443346688999999999999999999984 7999999999999999987522 68999999999998
Q ss_pred CCCCcccceeccCcccccccc
Q psy7834 126 LDEAPYDIIHVGGSIEDIPEG 146 (492)
Q Consensus 126 ~~~~~~D~i~~~~~~~~l~~~ 146 (492)
+++++||+|++..+++++.+.
T Consensus 112 ~~~~~fD~v~~~~~l~~~~~~ 132 (242)
T 3l8d_A 112 FENEQFEAIMAINSLEWTEEP 132 (242)
T ss_dssp SCTTCEEEEEEESCTTSSSCH
T ss_pred CCCCCccEEEEcChHhhccCH
Confidence 888999999999888776443
No 282
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.20 E-value=7e-11 Score=107.44 Aligned_cols=109 Identities=18% Similarity=0.149 Sum_probs=75.7
Q ss_pred hHHHHHHHHHHHh-ccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEE
Q psy7834 195 PKVHAQALEILKD-YLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVD 273 (492)
Q Consensus 195 ~~~~~~~~~~l~~-~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~ 273 (492)
+.+...++..+.. ...++.+|||+|||+|.++..+++. ...+|+|+|+|+.|++.|++++. ++++++
T Consensus 34 ~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~----------~~~~~~ 101 (200)
T 1ne2_A 34 ASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG----------GVNFMV 101 (200)
T ss_dssp HHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT----------TSEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC----------CCEEEE
Confidence 3444555544432 2346789999999999999999987 24579999999999999998853 479999
Q ss_pred ccCCCCCcCCCCccEEEecCcchhhHH-----HHHHHhccCCeEEEEeCC
Q psy7834 274 GDGREGHAAEGPYDVIYVGGAVHHYPF-----KLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 274 ~d~~~~~~~~~~fD~i~s~~~~~~~~~-----~~~~~L~pgG~l~~~~~~ 318 (492)
+|+.+.+ ++||+|+++..+++..+ -+.++++..|.+++.+.+
T Consensus 102 ~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~g~~~~~~~~ 148 (200)
T 1ne2_A 102 ADVSEIS---GKYDTWIMNPPFGSVVKHSDRAFIDKAFETSMWIYSIGNA 148 (200)
T ss_dssp CCGGGCC---CCEEEEEECCCC-------CHHHHHHHHHHEEEEEEEEEG
T ss_pred CcHHHCC---CCeeEEEECCCchhccCchhHHHHHHHHHhcCcEEEEEcC
Confidence 9987642 68999999998877653 222333333566665533
No 283
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.20 E-value=4.9e-11 Score=106.05 Aligned_cols=90 Identities=21% Similarity=0.303 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCC
Q psy7834 42 QQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDG 121 (492)
Q Consensus 42 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 121 (492)
+.+.+++.+ .+.++.+|||+|||+|.++..+++.. +..+|+++|+|+.+++.|++++.+.++. .++ ++++|.
T Consensus 13 ~~~~~~~~~--~~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~~-~~~~d~ 84 (178)
T 3hm2_A 13 VRALAISAL--APKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVS----DRI-AVQQGA 84 (178)
T ss_dssp HHHHHHHHH--CCCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCT----TSE-EEECCT
T ss_pred HHHHHHHHh--cccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCC----CCE-EEecch
Confidence 356677777 67888999999999999999999985 4489999999999999999999888872 488 899998
Q ss_pred CCCCCCC--CcccceeccCcc
Q psy7834 122 RKGYLDE--APYDIIHVGGSI 140 (492)
Q Consensus 122 ~~~~~~~--~~~D~i~~~~~~ 140 (492)
.+ .++. ++||+|+++..+
T Consensus 85 ~~-~~~~~~~~~D~i~~~~~~ 104 (178)
T 3hm2_A 85 PR-AFDDVPDNPDVIFIGGGL 104 (178)
T ss_dssp TG-GGGGCCSCCSEEEECC-T
T ss_pred Hh-hhhccCCCCCEEEECCcc
Confidence 55 2333 789999986555
No 284
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.20 E-value=6.4e-11 Score=114.00 Aligned_cols=84 Identities=21% Similarity=0.261 Sum_probs=73.1
Q ss_pred CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC-CCCCcccc
Q psy7834 55 TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY-LDEAPYDI 133 (492)
Q Consensus 55 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~ 133 (492)
.++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++....++. .+++++++|+.+++ +.+++||+
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~fD~ 139 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAERG---HQVILCDLSAQMIDRAKQAAEAKGVS----DNMQFIHCAAQDVASHLETPVDL 139 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHC-CCG----GGEEEEESCGGGTGGGCSSCEEE
T ss_pred CCCCEEEEeCCcchHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCC----cceEEEEcCHHHhhhhcCCCceE
Confidence 346799999999999999999984 79999999999999999999888773 68999999999987 66789999
Q ss_pred eeccCccccccc
Q psy7834 134 IHVGGSIEDIPE 145 (492)
Q Consensus 134 i~~~~~~~~l~~ 145 (492)
|++..+++++.+
T Consensus 140 v~~~~~l~~~~~ 151 (285)
T 4htf_A 140 ILFHAVLEWVAD 151 (285)
T ss_dssp EEEESCGGGCSC
T ss_pred EEECchhhcccC
Confidence 999888766543
No 285
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.20 E-value=2e-11 Score=112.96 Aligned_cols=82 Identities=13% Similarity=0.150 Sum_probs=69.1
Q ss_pred CeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC--CCCCccccee
Q psy7834 58 KKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY--LDEAPYDIIH 135 (492)
Q Consensus 58 ~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~D~i~ 135 (492)
.+|||+|||+|+.+..+++..++.++|+++|+++++++.|++++++.++. .++++++++|+.+.. +.+++||+|+
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~---~~~i~~~~gda~~~l~~~~~~~fD~V~ 134 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYS---PSRVRFLLSRPLDVMSRLANDSYQLVF 134 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCC---GGGEEEECSCHHHHGGGSCTTCEEEEE
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---cCcEEEEEcCHHHHHHHhcCCCcCeEE
Confidence 49999999999999999998755689999999999999999999998871 137999999987753 2357999999
Q ss_pred ccCcccc
Q psy7834 136 VGGSIED 142 (492)
Q Consensus 136 ~~~~~~~ 142 (492)
+......
T Consensus 135 ~d~~~~~ 141 (221)
T 3dr5_A 135 GQVSPMD 141 (221)
T ss_dssp ECCCTTT
T ss_pred EcCcHHH
Confidence 8765543
No 286
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.19 E-value=7.4e-11 Score=113.42 Aligned_cols=110 Identities=16% Similarity=0.157 Sum_probs=83.2
Q ss_pred ccccccccccCCcccCCccccccchhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHH
Q psy7834 14 PYANCITNIGYGAHMQAPFQDNTKFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQL 93 (492)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~ 93 (492)
.|.+..+.++.+..+.+|.. ..+...+++.+ ...++.+|||+|||+|.++..+++. +..+|+|+|+|+.+
T Consensus 89 ~f~~~~~~v~~~~lipr~~t------e~lv~~~l~~~--~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~a 158 (284)
T 1nv8_A 89 EFMGLSFLVEEGVFVPRPET------EELVELALELI--RKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKA 158 (284)
T ss_dssp EETTEEEECCTTSCCCCTTH------HHHHHHHHHHH--HHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHH
T ss_pred EECCeEEEeCCCceecChhH------HHHHHHHHHHh--cccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHH
Confidence 34445555556666666544 33444555555 3346789999999999999999998 34899999999999
Q ss_pred HHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcc---cceeccCc
Q psy7834 94 VQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPY---DIIHVGGS 139 (492)
Q Consensus 94 ~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~---D~i~~~~~ 139 (492)
++.|+++...+++. ++++|+++|+.+. .+ ++| |+|+++-.
T Consensus 159 l~~A~~n~~~~~l~----~~v~~~~~D~~~~-~~-~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 159 VEIARKNAERHGVS----DRFFVRKGEFLEP-FK-EKFASIEMILSNPP 201 (284)
T ss_dssp HHHHHHHHHHTTCT----TSEEEEESSTTGG-GG-GGTTTCCEEEECCC
T ss_pred HHHHHHHHHHcCCC----CceEEEECcchhh-cc-cccCCCCEEEEcCC
Confidence 99999999998873 4699999999873 22 578 99999633
No 287
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.19 E-value=3.1e-11 Score=116.02 Aligned_cols=106 Identities=21% Similarity=0.230 Sum_probs=81.9
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCC-cCCCCccE
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGH-AAEGPYDV 288 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~ 288 (492)
+++.+|||||||+|.++..+++.. +..+|+++|+|+.+++.|++++...+.. ...++++++.+|+.+.. ...++||+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~-~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCG-YEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGG-GGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccc-cCCCcEEEEECChHHHHHhCCCCceE
Confidence 457899999999999999998764 5679999999999999999987642100 01368999999986532 22578999
Q ss_pred EEecCcch----------hhHHHHHHHhccCCeEEEEeC
Q psy7834 289 IYVGGAVH----------HYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 289 i~s~~~~~----------~~~~~~~~~L~pgG~l~~~~~ 317 (492)
|+++...+ .+..++.+.|+|||++++...
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 99865432 233588999999999999754
No 288
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.19 E-value=7.5e-11 Score=108.49 Aligned_cols=78 Identities=17% Similarity=0.217 Sum_probs=68.5
Q ss_pred CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC--CCCCccc
Q psy7834 55 TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY--LDEAPYD 132 (492)
Q Consensus 55 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~D 132 (492)
.++.+|||||||+|.++..+|+.. +..+|+|+|+|+.|++.|++++.+.++ .+++++++|+.+++ +++++||
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~-----~nv~~~~~d~~~l~~~~~~~~~d 110 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEA-----QNVKLLNIDADTLTDVFEPGEVK 110 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCC-----SSEEEECCCGGGHHHHCCTTSCC
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCC-----CCEEEEeCCHHHHHhhcCcCCcC
Confidence 357899999999999999999985 558999999999999999999988887 68999999998865 5678899
Q ss_pred ceeccC
Q psy7834 133 IIHVGG 138 (492)
Q Consensus 133 ~i~~~~ 138 (492)
.|+++.
T Consensus 111 ~v~~~~ 116 (213)
T 2fca_A 111 RVYLNF 116 (213)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 997643
No 289
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.19 E-value=2.4e-11 Score=113.37 Aligned_cols=93 Identities=19% Similarity=0.349 Sum_probs=75.2
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
.+.+..++ ...++.+|||+|||+|+.+..+++.. +.++|+++|+++.+++.|++++++.++. ++++++++|+.
T Consensus 60 ~~~l~~~~--~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~ 132 (232)
T 3ntv_A 60 LDLIKQLI--RMNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFE----NQVRIIEGNAL 132 (232)
T ss_dssp HHHHHHHH--HHHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCT----TTEEEEESCGG
T ss_pred HHHHHHHH--hhcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEECCHH
Confidence 33444444 45678999999999999999999954 4589999999999999999999988873 58999999997
Q ss_pred CCCC--CCCcccceeccCcccc
Q psy7834 123 KGYL--DEAPYDIIHVGGSIED 142 (492)
Q Consensus 123 ~~~~--~~~~~D~i~~~~~~~~ 142 (492)
+... .+++||+|++......
T Consensus 133 ~~~~~~~~~~fD~V~~~~~~~~ 154 (232)
T 3ntv_A 133 EQFENVNDKVYDMIFIDAAKAQ 154 (232)
T ss_dssp GCHHHHTTSCEEEEEEETTSSS
T ss_pred HHHHhhccCCccEEEEcCcHHH
Confidence 7532 2679999998765543
No 290
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.19 E-value=6.1e-11 Score=107.27 Aligned_cols=94 Identities=24% Similarity=0.309 Sum_probs=71.4
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCC--------CeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE-EccCCCC
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPT--------GKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV-DGDGREG 279 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~--------~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~-~~d~~~~ 279 (492)
++++.+|||+|||+|.++..++++.++. ++|+|+|+|+.+ ...+++++ ++|+...
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----------------~~~~~~~~~~~d~~~~ 83 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----------------PLEGATFLCPADVTDP 83 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----------------CCTTCEEECSCCTTSH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----------------cCCCCeEEEeccCCCH
Confidence 5788999999999999999999987543 799999999831 12357888 8887653
Q ss_pred C--------cCCCCccEEEecCcch----h-------------hHHHHHHHhccCCeEEEEeCC
Q psy7834 280 H--------AAEGPYDVIYVGGAVH----H-------------YPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 280 ~--------~~~~~fD~i~s~~~~~----~-------------~~~~~~~~L~pgG~l~~~~~~ 318 (492)
. .++++||+|+++...+ + +..++.++|||||++++.+..
T Consensus 84 ~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 84 RTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 2 1245899999865432 2 223678999999999997643
No 291
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.18 E-value=7e-11 Score=112.02 Aligned_cols=83 Identities=17% Similarity=0.185 Sum_probs=72.0
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
.+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++. ..+. .+++++++|+.++++++++||
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~-~~~~-----~~~~~~~~d~~~~~~~~~~fD 106 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARG---YRYIALDADAAMLEVFRQKI-AGVD-----RKVQVVQADARAIPLPDESVH 106 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTT---CEEEEEESCHHHHHHHHHHT-TTSC-----TTEEEEESCTTSCCSCTTCEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCC---CEEEEEECCHHHHHHHHHHh-hccC-----CceEEEEcccccCCCCCCCee
Confidence 45678899999999999999999874 79999999999999999987 3332 689999999999888888999
Q ss_pred ceeccCcccccc
Q psy7834 133 IIHVGGSIEDIP 144 (492)
Q Consensus 133 ~i~~~~~~~~l~ 144 (492)
+|++..+++.+.
T Consensus 107 ~v~~~~~l~~~~ 118 (263)
T 2yqz_A 107 GVIVVHLWHLVP 118 (263)
T ss_dssp EEEEESCGGGCT
T ss_pred EEEECCchhhcC
Confidence 999988776553
No 292
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.17 E-value=6.8e-11 Score=109.11 Aligned_cols=79 Identities=15% Similarity=0.117 Sum_probs=69.5
Q ss_pred CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC-C--CCCCcc
Q psy7834 55 TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG-Y--LDEAPY 131 (492)
Q Consensus 55 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~--~~~~~~ 131 (492)
.++.+|||||||+|.++..+|+.. ++.+|+|||+|++|++.|++++++.++ .|++++++|+.++ + +++++|
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l-----~nv~~~~~Da~~~l~~~~~~~~~ 106 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGL-----SNLRVMCHDAVEVLHKMIPDNSL 106 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTC-----SSEEEECSCHHHHHHHHSCTTCE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCC-----CcEEEEECCHHHHHHHHcCCCCh
Confidence 367899999999999999999985 568999999999999999999988887 6899999998874 2 567899
Q ss_pred cceeccCc
Q psy7834 132 DIIHVGGS 139 (492)
Q Consensus 132 D~i~~~~~ 139 (492)
|.|+++..
T Consensus 107 d~v~~~~~ 114 (218)
T 3dxy_A 107 RMVQLFFP 114 (218)
T ss_dssp EEEEEESC
T ss_pred heEEEeCC
Confidence 99998643
No 293
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.17 E-value=2.1e-11 Score=114.94 Aligned_cols=79 Identities=13% Similarity=0.100 Sum_probs=69.5
Q ss_pred CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCC---CCcc
Q psy7834 55 TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLD---EAPY 131 (492)
Q Consensus 55 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~ 131 (492)
.++.+|||||||+|..++.++... +..+|+++|+|+.|++.|+++++++++ .+++++++|+++++.. .++|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l-----~~v~~~~~d~~~~~~~~~~~~~f 152 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGL-----KGARALWGRAEVLAREAGHREAY 152 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTC-----SSEEEEECCHHHHTTSTTTTTCE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCC-----CceEEEECcHHHhhcccccCCCc
Confidence 467899999999999999999986 558999999999999999999998887 6799999999887643 4789
Q ss_pred cceeccCc
Q psy7834 132 DIIHVGGS 139 (492)
Q Consensus 132 D~i~~~~~ 139 (492)
|+|++...
T Consensus 153 D~I~s~a~ 160 (249)
T 3g89_A 153 ARAVARAV 160 (249)
T ss_dssp EEEEEESS
T ss_pred eEEEECCc
Confidence 99998643
No 294
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.17 E-value=1.2e-10 Score=106.19 Aligned_cols=90 Identities=13% Similarity=0.137 Sum_probs=74.5
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
.+.+++.+...+.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|+++...+++ .+++++++|+.
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~~~~~d~~ 119 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLG--AKSVLATDISDESMTAAEENAALNGI-----YDIALQKTSLL 119 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTC-----CCCEEEESSTT
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEecccc
Confidence 345566664446788999999999999999999863 26999999999999999999988877 45999999987
Q ss_pred CCCCCCCcccceeccCccc
Q psy7834 123 KGYLDEAPYDIIHVGGSIE 141 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~~~~~ 141 (492)
+.. +++||+|+++...+
T Consensus 120 ~~~--~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 120 ADV--DGKFDLIVANILAE 136 (205)
T ss_dssp TTC--CSCEEEEEEESCHH
T ss_pred ccC--CCCceEEEECCcHH
Confidence 743 58999999986654
No 295
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.17 E-value=2.8e-11 Score=121.52 Aligned_cols=101 Identities=17% Similarity=0.221 Sum_probs=81.9
Q ss_pred CCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcC----CCCc
Q psy7834 211 PGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAA----EGPY 286 (492)
Q Consensus 211 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~----~~~f 286 (492)
++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|++|+..++ ..+++++++|+.+.... .++|
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~-----~~~~~~~~~d~~~~~~~~~~~~~~f 280 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNG-----LGNVRVLEANAFDLLRRLEKEGERF 280 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTT-----CTTEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcC-----CCCceEEECCHHHHHHHHHhcCCCe
Confidence 7889999999999999999987 3479999999999999999998864 34699999998654321 5689
Q ss_pred cEEEecCcc---------------hhhHHHHHHHhccCCeEEEEeCCC
Q psy7834 287 DVIYVGGAV---------------HHYPFKLMDQLKPGGVMWFTIGNA 319 (492)
Q Consensus 287 D~i~s~~~~---------------~~~~~~~~~~L~pgG~l~~~~~~~ 319 (492)
|+|+++... ..+..++.+.|+|||++++++...
T Consensus 281 D~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 281 DLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp EEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred eEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 999997533 123347889999999999987543
No 296
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.17 E-value=9.6e-11 Score=112.70 Aligned_cols=89 Identities=24% Similarity=0.283 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCC
Q psy7834 42 QQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDG 121 (492)
Q Consensus 42 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 121 (492)
+..++++.+ .+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.++++....+.. ++++++++|+
T Consensus 16 i~~~i~~~~--~~~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~D~ 86 (285)
T 1zq9_A 16 IINSIIDKA--ALRPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTPVA----SKLQVLVGDV 86 (285)
T ss_dssp HHHHHHHHT--CCCTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTSTTG----GGEEEEESCT
T ss_pred HHHHHHHhc--CCCCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcCCC----CceEEEEcce
Confidence 367777777 77788999999999999999999985 79999999999999999998766542 5899999999
Q ss_pred CCCCCCCCcccceeccCccc
Q psy7834 122 RKGYLDEAPYDIIHVGGSIE 141 (492)
Q Consensus 122 ~~~~~~~~~~D~i~~~~~~~ 141 (492)
.+.+++ +||+|+++...+
T Consensus 87 ~~~~~~--~fD~vv~nlpy~ 104 (285)
T 1zq9_A 87 LKTDLP--FFDTCVANLPYQ 104 (285)
T ss_dssp TTSCCC--CCSEEEEECCGG
T ss_pred ecccch--hhcEEEEecCcc
Confidence 887654 799999976553
No 297
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.17 E-value=4.4e-11 Score=113.68 Aligned_cols=88 Identities=20% Similarity=0.216 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCC
Q psy7834 42 QQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDG 121 (492)
Q Consensus 42 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 121 (492)
+.+.+++.+ ...++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++ .+++++++|+
T Consensus 22 ~~~~l~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~-----------~~~~~~~~d~ 85 (261)
T 3ege_A 22 IVNAIINLL--NLPKGSVIADIGAGTGGYSVALANQG---LFVYAVEPSIVMRQQAVVH-----------PQVEWFTGYA 85 (261)
T ss_dssp HHHHHHHHH--CCCTTCEEEEETCTTSHHHHHHHTTT---CEEEEECSCHHHHHSSCCC-----------TTEEEECCCT
T ss_pred HHHHHHHHh--CCCCCCEEEEEcCcccHHHHHHHhCC---CEEEEEeCCHHHHHHHHhc-----------cCCEEEECch
Confidence 356666666 56788999999999999999999853 8999999999999887654 3689999999
Q ss_pred CCCCCCCCcccceeccCccccccc
Q psy7834 122 RKGYLDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 122 ~~~~~~~~~~D~i~~~~~~~~l~~ 145 (492)
+++++++++||+|++..+++++.+
T Consensus 86 ~~~~~~~~~fD~v~~~~~l~~~~~ 109 (261)
T 3ege_A 86 ENLALPDKSVDGVISILAIHHFSH 109 (261)
T ss_dssp TSCCSCTTCBSEEEEESCGGGCSS
T ss_pred hhCCCCCCCEeEEEEcchHhhccC
Confidence 999888899999999888876533
No 298
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.17 E-value=5.2e-10 Score=102.09 Aligned_cols=110 Identities=17% Similarity=0.193 Sum_probs=81.3
Q ss_pred cChHHHHHHHHHHHh-ccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEE
Q psy7834 193 SSPKVHAQALEILKD-YLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQF 271 (492)
Q Consensus 193 ~~~~~~~~~~~~l~~-~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~ 271 (492)
+.+.+...++..+.. ...++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|++++..++ . ++++
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~-----~-~~~~ 101 (207)
T 1wy7_A 30 TPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLG--AKEVICVEVDKEAVDVLIENLGEFK-----G-KFKV 101 (207)
T ss_dssp CCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHTGGGT-----T-SEEE
T ss_pred CchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcC-----C-CEEE
Confidence 445555555555532 13467899999999999999999873 3479999999999999999988753 2 7999
Q ss_pred EEccCCCCCcCCCCccEEEecCcchhhH--------HHHHHHhccCCeEEEEe
Q psy7834 272 VDGDGREGHAAEGPYDVIYVGGAVHHYP--------FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 272 ~~~d~~~~~~~~~~fD~i~s~~~~~~~~--------~~~~~~L~pgG~l~~~~ 316 (492)
+++|+.+.+ ++||+|+++..++... +++.+.| |.+++.+
T Consensus 102 ~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l---~~~~~~~ 148 (207)
T 1wy7_A 102 FIGDVSEFN---SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS---DVVYSIH 148 (207)
T ss_dssp EESCGGGCC---CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC---SEEEEEE
T ss_pred EECchHHcC---CCCCEEEEcCCCccccCCchHHHHHHHHHhc---CcEEEEE
Confidence 999987642 4899999998764432 3555666 5555544
No 299
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.17 E-value=9.4e-11 Score=112.91 Aligned_cols=88 Identities=20% Similarity=0.214 Sum_probs=74.2
Q ss_pred HHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC
Q psy7834 45 MVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG 124 (492)
Q Consensus 45 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 124 (492)
.+++.+ .+.++.+|||||||+|.++..+++..+ .+|+|+|+|+++++.|+++..+.++. .+++++++|+.++
T Consensus 55 ~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~ 126 (287)
T 1kpg_A 55 LALGKL--GLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENL----RSKRVLLAGWEQF 126 (287)
T ss_dssp HHHTTT--TCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCC----SCEEEEESCGGGC
T ss_pred HHHHHc--CCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCC----CCeEEEECChhhC
Confidence 344444 567889999999999999999997665 69999999999999999999887763 6899999999876
Q ss_pred CCCCCcccceeccCccccc
Q psy7834 125 YLDEAPYDIIHVGGSIEDI 143 (492)
Q Consensus 125 ~~~~~~~D~i~~~~~~~~l 143 (492)
+ ++||+|++..+++++
T Consensus 127 ~---~~fD~v~~~~~l~~~ 142 (287)
T 1kpg_A 127 D---EPVDRIVSIGAFEHF 142 (287)
T ss_dssp C---CCCSEEEEESCGGGT
T ss_pred C---CCeeEEEEeCchhhc
Confidence 5 789999998777654
No 300
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.17 E-value=3.5e-11 Score=121.51 Aligned_cols=104 Identities=17% Similarity=0.284 Sum_probs=82.1
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc----CCC
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA----AEG 284 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~ 284 (492)
.+++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|++|+..++. ..+++++++|+.+... ..+
T Consensus 215 ~~~~~~VLDl~~G~G~~~~~la~~g--~~~v~~vD~s~~~l~~a~~n~~~n~~----~~~v~~~~~d~~~~~~~~~~~~~ 288 (396)
T 2as0_A 215 VQPGDRVLDVFTYTGGFAIHAAIAG--ADEVIGIDKSPRAIETAKENAKLNGV----EDRMKFIVGSAFEEMEKLQKKGE 288 (396)
T ss_dssp CCTTCEEEETTCTTTHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEESCHHHHHHHHHHTTC
T ss_pred hhCCCeEEEecCCCCHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCC----CccceEEECCHHHHHHHHHhhCC
Confidence 3478999999999999999999862 45899999999999999999988641 1279999999865432 256
Q ss_pred CccEEEecCcc---------------hhhHHHHHHHhccCCeEEEEeCC
Q psy7834 285 PYDVIYVGGAV---------------HHYPFKLMDQLKPGGVMWFTIGN 318 (492)
Q Consensus 285 ~fD~i~s~~~~---------------~~~~~~~~~~L~pgG~l~~~~~~ 318 (492)
+||+|+++... ..+..++.+.|+|||++++.+..
T Consensus 289 ~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 289 KFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp CEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 89999997543 12224788999999999887644
No 301
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.16 E-value=3.6e-11 Score=120.14 Aligned_cols=92 Identities=16% Similarity=0.289 Sum_probs=76.7
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||||||+|.++..+++.. |..+++++|+ +.|++.|++ .++++++.+|+.+ +.+.+ |+
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~-~~p~~--D~ 264 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPA-----------FSGVEHLGGDMFD-GVPKG--DA 264 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTT-CCCCC--SE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhh-----------cCCCEEEecCCCC-CCCCC--CE
Confidence 3456899999999999999999987 7889999999 999877653 1479999999976 44433 99
Q ss_pred EEecCcchhhHH--------HHHHHhccCCeEEEEe
Q psy7834 289 IYVGGAVHHYPF--------KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 289 i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~ 316 (492)
|++..++|++++ +++++|||||++++..
T Consensus 265 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 265 IFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp EEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 999999987753 6889999999999864
No 302
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.16 E-value=8.9e-11 Score=108.75 Aligned_cols=91 Identities=22% Similarity=0.260 Sum_probs=70.1
Q ss_pred HHHHHHHHH-HhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCC
Q psy7834 43 QAMVLDDLS-EELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDG 121 (492)
Q Consensus 43 ~~~~~~~l~-~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 121 (492)
.+.+++.+. -.+++|.+|||+|||+|.++..+|+.+++.++|+|+|+++.|++...+..++. .|+.++++|+
T Consensus 62 a~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-------~nv~~i~~Da 134 (232)
T 3id6_C 62 AGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-------PNIFPLLADA 134 (232)
T ss_dssp HHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-------TTEEEEECCT
T ss_pred HHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-------CCeEEEEccc
Confidence 444545441 14789999999999999999999999887899999999999976555444332 5899999998
Q ss_pred CCCCC---CCCcccceeccCcc
Q psy7834 122 RKGYL---DEAPYDIIHVGGSI 140 (492)
Q Consensus 122 ~~~~~---~~~~~D~i~~~~~~ 140 (492)
..... ..++||+|+++.+.
T Consensus 135 ~~~~~~~~~~~~~D~I~~d~a~ 156 (232)
T 3id6_C 135 RFPQSYKSVVENVDVLYVDIAQ 156 (232)
T ss_dssp TCGGGTTTTCCCEEEEEECCCC
T ss_pred ccchhhhccccceEEEEecCCC
Confidence 76431 24689999998665
No 303
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.16 E-value=7.8e-11 Score=114.11 Aligned_cols=110 Identities=17% Similarity=0.225 Sum_probs=81.9
Q ss_pred CCcc-cChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCC
Q psy7834 189 GSVM-SSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGG 267 (492)
Q Consensus 189 ~~~~-~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~ 267 (492)
|++. ..+.+.+.+++.+. +.++.+|||+|||+|.++..+++.. ++|+|+|+|+.|++.|++++...+ .+
T Consensus 21 Gq~fl~~~~i~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~La~~~---~~v~~vDi~~~~~~~a~~~~~~~~-----~~ 90 (299)
T 2h1r_A 21 GQHLLKNPGILDKIIYAAK--IKSSDIVLEIGCGTGNLTVKLLPLA---KKVITIDIDSRMISEVKKRCLYEG-----YN 90 (299)
T ss_dssp --CEECCHHHHHHHHHHHC--CCTTCEEEEECCTTSTTHHHHTTTS---SEEEEECSCHHHHHHHHHHHHHTT-----CC
T ss_pred ccceecCHHHHHHHHHhcC--CCCcCEEEEEcCcCcHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcC-----CC
Confidence 4444 46777788888775 6778999999999999999998763 489999999999999999987642 35
Q ss_pred cEEEEEccCCCCCcCCCCccEEEecCcchhhHHHHHHHhccCC
Q psy7834 268 RVQFVDGDGREGHAAEGPYDVIYVGGAVHHYPFKLMDQLKPGG 310 (492)
Q Consensus 268 ~v~~~~~d~~~~~~~~~~fD~i~s~~~~~~~~~~~~~~L~pgG 310 (492)
+++++++|+...+. ++||+|+++...++....+.++|+..+
T Consensus 91 ~v~~~~~D~~~~~~--~~~D~Vv~n~py~~~~~~~~~ll~~~~ 131 (299)
T 2h1r_A 91 NLEVYEGDAIKTVF--PKFDVCTANIPYKISSPLIFKLISHRP 131 (299)
T ss_dssp CEEC----CCSSCC--CCCSEEEEECCGGGHHHHHHHHHHCSS
T ss_pred ceEEEECchhhCCc--ccCCEEEEcCCcccccHHHHHHHhcCC
Confidence 79999999876543 479999999887766666666665443
No 304
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.16 E-value=4e-11 Score=106.69 Aligned_cols=92 Identities=13% Similarity=0.192 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCC
Q psy7834 42 QQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDG 121 (492)
Q Consensus 42 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 121 (492)
+...+++.+. ...++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|++++...++. ++++++++|+
T Consensus 18 ~~~~~~~~l~-~~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~~~~~~~d~ 90 (177)
T 2esr_A 18 VRGAIFNMIG-PYFNGGRVLDLFAGSGGLAIEAVSRG--MSAAVLVEKNRKAQAIIQDNIIMTKAE----NRFTLLKMEA 90 (177)
T ss_dssp CHHHHHHHHC-SCCCSCEEEEETCTTCHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHHHTTTCG----GGEEEECSCH
T ss_pred HHHHHHHHHH-hhcCCCeEEEeCCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCCC----CceEEEECcH
Confidence 3566666662 15678899999999999999999873 269999999999999999999888773 5799999998
Q ss_pred CCC-CCCCCcccceeccCcc
Q psy7834 122 RKG-YLDEAPYDIIHVGGSI 140 (492)
Q Consensus 122 ~~~-~~~~~~~D~i~~~~~~ 140 (492)
.+. +...++||+|+++...
T Consensus 91 ~~~~~~~~~~fD~i~~~~~~ 110 (177)
T 2esr_A 91 ERAIDCLTGRFDLVFLDPPY 110 (177)
T ss_dssp HHHHHHBCSCEEEEEECCSS
T ss_pred HHhHHhhcCCCCEEEECCCC
Confidence 773 3334679999987543
No 305
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.16 E-value=1e-11 Score=118.00 Aligned_cols=100 Identities=16% Similarity=0.024 Sum_probs=70.7
Q ss_pred ccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE--EccCCCCCcCCCC
Q psy7834 208 YLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV--DGDGREGHAAEGP 285 (492)
Q Consensus 208 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~ 285 (492)
.++++.+|||+|||+|.++..++++ ++|+|+|+|+ |+..++++..... ....++.++ ++|+..++ +++
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~---~~~~~v~~~~~~~D~~~l~--~~~ 140 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITE---SYGWNIVKFKSRVDIHTLP--VER 140 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCC---BTTGGGEEEECSCCTTTSC--CCC
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhh---ccCCCeEEEecccCHhHCC--CCC
Confidence 3678899999999999999999876 4699999998 6433321100000 001168999 99987653 578
Q ss_pred ccEEEecCcc---hh---------hHHHHHHHhccCC--eEEEEeC
Q psy7834 286 YDVIYVGGAV---HH---------YPFKLMDQLKPGG--VMWFTIG 317 (492)
Q Consensus 286 fD~i~s~~~~---~~---------~~~~~~~~L~pgG--~l~~~~~ 317 (492)
||+|+|+.+. ++ +...+.++||||| .+++.+.
T Consensus 141 fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 141 TDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 9999998651 11 2246779999999 9988653
No 306
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.16 E-value=1.2e-10 Score=108.51 Aligned_cols=92 Identities=20% Similarity=0.291 Sum_probs=75.8
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
+.+++.+. ...++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.|+++.... .+++++++|+.+
T Consensus 33 ~~~~~~~~-~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~ 103 (234)
T 3dtn_A 33 GVSVSIAS-VDTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGN-------LKVKYIEADYSK 103 (234)
T ss_dssp HHHHHTCC-CSCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSC-------TTEEEEESCTTT
T ss_pred HHHHHHhh-cCCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccC-------CCEEEEeCchhc
Confidence 34444441 24577899999999999999999986 4489999999999999999987553 479999999999
Q ss_pred CCCCCCcccceeccCccccccc
Q psy7834 124 GYLDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 124 ~~~~~~~~D~i~~~~~~~~l~~ 145 (492)
.+++ ++||+|++..+++++.+
T Consensus 104 ~~~~-~~fD~v~~~~~l~~~~~ 124 (234)
T 3dtn_A 104 YDFE-EKYDMVVSALSIHHLED 124 (234)
T ss_dssp CCCC-SCEEEEEEESCGGGSCH
T ss_pred cCCC-CCceEEEEeCccccCCH
Confidence 8876 89999999888876543
No 307
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.16 E-value=1.1e-10 Score=108.23 Aligned_cols=74 Identities=22% Similarity=0.236 Sum_probs=64.9
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCC-CCCCCC-CCcc
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDG-RKGYLD-EAPY 131 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~-~~~~ 131 (492)
+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++. .+++++++|+ ..++++ +++|
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~~~f 112 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQA---ARWAAYDFSPELLKLARANA----------PHADVYEWNGKGELPAGLGAPF 112 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHC----------TTSEEEECCSCSSCCTTCCCCE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhC----------CCceEEEcchhhccCCcCCCCE
Confidence 5678999999999999999999984 79999999999999999882 6799999999 567776 7899
Q ss_pred cceeccCcc
Q psy7834 132 DIIHVGGSI 140 (492)
Q Consensus 132 D~i~~~~~~ 140 (492)
|+|+++...
T Consensus 113 D~v~~~~~~ 121 (226)
T 3m33_A 113 GLIVSRRGP 121 (226)
T ss_dssp EEEEEESCC
T ss_pred EEEEeCCCH
Confidence 999997433
No 308
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.16 E-value=3.2e-11 Score=127.36 Aligned_cols=90 Identities=21% Similarity=0.254 Sum_probs=76.6
Q ss_pred HHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC--CC
Q psy7834 49 DLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG--YL 126 (492)
Q Consensus 49 ~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~ 126 (492)
.+...+..+.+|||||||+|.++..||+.+ ++|+|||+++.+|+.|+.++.+.+. -+++|.+++++++ ..
T Consensus 59 ~~~~~~~~~~~vLDvGCG~G~~~~~la~~g---a~V~giD~~~~~i~~a~~~a~~~~~-----~~~~~~~~~~~~~~~~~ 130 (569)
T 4azs_A 59 NLSRALGRPLNVLDLGCAQGFFSLSLASKG---ATIVGIDFQQENINVCRALAEENPD-----FAAEFRVGRIEEVIAAL 130 (569)
T ss_dssp HHHHHHTSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTSTT-----SEEEEEECCHHHHHHHC
T ss_pred HHHhhcCCCCeEEEECCCCcHHHHHHHhCC---CEEEEECCCHHHHHHHHHHHHhcCC-----CceEEEECCHHHHhhhc
Confidence 333345677899999999999999999985 8999999999999999999887764 4799999999887 34
Q ss_pred CCCcccceeccCcccccccc
Q psy7834 127 DEAPYDIIHVGGSIEDIPEG 146 (492)
Q Consensus 127 ~~~~~D~i~~~~~~~~l~~~ 146 (492)
.+++||+|++..+++++++.
T Consensus 131 ~~~~fD~v~~~e~~ehv~~~ 150 (569)
T 4azs_A 131 EEGEFDLAIGLSVFHHIVHL 150 (569)
T ss_dssp CTTSCSEEEEESCHHHHHHH
T ss_pred cCCCccEEEECcchhcCCCH
Confidence 56789999999999877653
No 309
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.16 E-value=4.7e-11 Score=116.18 Aligned_cols=89 Identities=20% Similarity=0.188 Sum_probs=76.5
Q ss_pred HhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcc
Q psy7834 52 EELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPY 131 (492)
Q Consensus 52 ~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 131 (492)
..+.++.+|||+|||+|.++..++....+..+|+|+|+|+.|++.|+++....++. ++++++++|+.+++++ ++|
T Consensus 114 ~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~-~~f 188 (305)
T 3ocj_A 114 RHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALA----GQITLHRQDAWKLDTR-EGY 188 (305)
T ss_dssp HHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTG----GGEEEEECCGGGCCCC-SCE
T ss_pred hhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCC----CceEEEECchhcCCcc-CCe
Confidence 36788999999999999999999633335589999999999999999999888773 5699999999998877 999
Q ss_pred cceeccCccccccc
Q psy7834 132 DIIHVGGSIEDIPE 145 (492)
Q Consensus 132 D~i~~~~~~~~l~~ 145 (492)
|+|+++.+++++++
T Consensus 189 D~v~~~~~~~~~~~ 202 (305)
T 3ocj_A 189 DLLTSNGLNIYEPD 202 (305)
T ss_dssp EEEECCSSGGGCCC
T ss_pred EEEEECChhhhcCC
Confidence 99999888776543
No 310
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.15 E-value=5.2e-11 Score=108.49 Aligned_cols=95 Identities=12% Similarity=0.074 Sum_probs=73.3
Q ss_pred hhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEec
Q psy7834 40 KFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLG 119 (492)
Q Consensus 40 ~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 119 (492)
..+.+.+++++.. ..++.+|||+|||+|.++..++.... .+|+|+|+|++|++.|+++++.+++. ..+++++++
T Consensus 38 ~~~~~~l~~~l~~-~~~~~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~---~~~v~~~~~ 111 (201)
T 2ift_A 38 DRVKETLFNWLMP-YIHQSECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCS---SEQAEVINQ 111 (201)
T ss_dssp CHHHHHHHHHHHH-HHTTCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCC---TTTEEEECS
T ss_pred HHHHHHHHHHHHH-hcCCCeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCC---ccceEEEEC
Confidence 3445566666621 12678999999999999998777642 69999999999999999999887751 037999999
Q ss_pred CCCCCCC--CCCc-ccceeccCcc
Q psy7834 120 DGRKGYL--DEAP-YDIIHVGGSI 140 (492)
Q Consensus 120 d~~~~~~--~~~~-~D~i~~~~~~ 140 (492)
|+.+... .+++ ||+|+++..+
T Consensus 112 d~~~~~~~~~~~~~fD~I~~~~~~ 135 (201)
T 2ift_A 112 SSLDFLKQPQNQPHFDVVFLDPPF 135 (201)
T ss_dssp CHHHHTTSCCSSCCEEEEEECCCS
T ss_pred CHHHHHHhhccCCCCCEEEECCCC
Confidence 9877543 3578 9999987653
No 311
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.15 E-value=9.7e-11 Score=108.00 Aligned_cols=88 Identities=20% Similarity=0.201 Sum_probs=75.2
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
..+++.+ ...++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++.. .+++++++|+.+
T Consensus 35 ~~~l~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~d~~~ 100 (220)
T 3hnr_A 35 EDILEDV--VNKSFGNVLEFGVGTGNLTNKLLLAG---RTVYGIEPSREMRMIAKEKLP---------KEFSITEGDFLS 100 (220)
T ss_dssp HHHHHHH--HHTCCSEEEEECCTTSHHHHHHHHTT---CEEEEECSCHHHHHHHHHHSC---------TTCCEESCCSSS
T ss_pred HHHHHHh--hccCCCeEEEeCCCCCHHHHHHHhCC---CeEEEEeCCHHHHHHHHHhCC---------CceEEEeCChhh
Confidence 4566666 56688999999999999999999984 799999999999999998863 268999999999
Q ss_pred CCCCCCcccceeccCcccccccc
Q psy7834 124 GYLDEAPYDIIHVGGSIEDIPEG 146 (492)
Q Consensus 124 ~~~~~~~~D~i~~~~~~~~l~~~ 146 (492)
++++ ++||+|++..+++++.+.
T Consensus 101 ~~~~-~~fD~v~~~~~l~~~~~~ 122 (220)
T 3hnr_A 101 FEVP-TSIDTIVSTYAFHHLTDD 122 (220)
T ss_dssp CCCC-SCCSEEEEESCGGGSCHH
T ss_pred cCCC-CCeEEEEECcchhcCChH
Confidence 8877 899999998888765544
No 312
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.15 E-value=8.3e-11 Score=111.05 Aligned_cols=81 Identities=20% Similarity=0.243 Sum_probs=70.8
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
...++.+|||+|||+|.++..+++.. . .+|+|+|+|+.|++.|+++... .+++++++|+.++++++++||
T Consensus 41 ~~~~~~~vLD~GcG~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~~~~~~~fD 110 (253)
T 3g5l_A 41 PDFNQKTVLDLGCGFGWHCIYAAEHG-A-KKVLGIDLSERMLTEAKRKTTS--------PVVCYEQKAIEDIAIEPDAYN 110 (253)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHTT-C-SEEEEEESCHHHHHHHHHHCCC--------TTEEEEECCGGGCCCCTTCEE
T ss_pred hccCCCEEEEECCCCCHHHHHHHHcC-C-CEEEEEECCHHHHHHHHHhhcc--------CCeEEEEcchhhCCCCCCCeE
Confidence 34478899999999999999999985 2 3999999999999999998752 689999999999888889999
Q ss_pred ceeccCccccc
Q psy7834 133 IIHVGGSIEDI 143 (492)
Q Consensus 133 ~i~~~~~~~~l 143 (492)
+|++..+++++
T Consensus 111 ~v~~~~~l~~~ 121 (253)
T 3g5l_A 111 VVLSSLALHYI 121 (253)
T ss_dssp EEEEESCGGGC
T ss_pred EEEEchhhhhh
Confidence 99998877654
No 313
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.15 E-value=3e-11 Score=114.51 Aligned_cols=101 Identities=15% Similarity=0.017 Sum_probs=79.5
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEE
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVI 289 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i 289 (492)
+.+.+|||||||+|.++..+++. + .+|+++|+++.|++.|++++...... ...++++++.+|+.+.. ++||+|
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~-~~~~rv~~~~~D~~~~~---~~fD~I 143 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEV-KNNKNFTHAKQLLDLDI---KKYDLI 143 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHH-HTCTTEEEESSGGGSCC---CCEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccc-cCCCeEEEEechHHHHH---hhCCEE
Confidence 45689999999999999999887 3 79999999999999999876431000 02357999999987643 789999
Q ss_pred EecCcch-hhHHHHHHHhccCCeEEEEeC
Q psy7834 290 YVGGAVH-HYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 290 ~s~~~~~-~~~~~~~~~L~pgG~l~~~~~ 317 (492)
+++..-+ .+..++.+.|+|||++++..+
T Consensus 144 i~d~~dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 144 FCLQEPDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp EESSCCCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EECCCChHHHHHHHHHhcCCCcEEEEEcC
Confidence 9986432 345689999999999999754
No 314
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.15 E-value=1.3e-10 Score=111.26 Aligned_cols=105 Identities=18% Similarity=0.220 Sum_probs=79.7
Q ss_pred ccccCCcccCCccccccchhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy7834 20 TNIGYGAHMQAPFQDNTKFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATH 99 (492)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~ 99 (492)
+.+..+..+.+|.. ..+...+++.+ . .++.+|||+|||+|.++..+++.. +..+|+++|+|+.+++.|++
T Consensus 82 ~~~~~~~~ipr~~t------e~l~~~~l~~~--~-~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~ 151 (276)
T 2b3t_A 82 LFVSPATLIPRPDT------ECLVEQALARL--P-EQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQR 151 (276)
T ss_dssp EECCTTSCCCCTTH------HHHHHHHHHHS--C-SSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHH
T ss_pred EEeCCCCcccCchH------HHHHHHHHHhc--c-cCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHH
Confidence 33444444455544 33344444443 2 567899999999999999999886 45899999999999999999
Q ss_pred hhhcCCCCccccCceEEEecCCCCCCCCCCcccceeccCcc
Q psy7834 100 NVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDIIHVGGSI 140 (492)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~ 140 (492)
+...+++ .+++++++|+.+. .+.++||+|+++...
T Consensus 152 n~~~~~~-----~~v~~~~~d~~~~-~~~~~fD~Iv~npPy 186 (276)
T 2b3t_A 152 NAQHLAI-----KNIHILQSDWFSA-LAGQQFAMIVSNPPY 186 (276)
T ss_dssp HHHHHTC-----CSEEEECCSTTGG-GTTCCEEEEEECCCC
T ss_pred HHHHcCC-----CceEEEEcchhhh-cccCCccEEEECCCC
Confidence 9988776 5899999998774 346789999997544
No 315
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.15 E-value=3.3e-11 Score=112.68 Aligned_cols=75 Identities=17% Similarity=0.088 Sum_probs=65.9
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC--CCCCCcc
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG--YLDEAPY 131 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~ 131 (492)
..++.+|||||||+|.++..+++... .+|+|+|+|+.|++.|+++....+ .+++++++|+.++ ++++++|
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~f 129 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQT------HKVIPLKGLWEDVAPTLPDGHF 129 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCE--EEEEEEECCHHHHHHHHHHGGGCS------SEEEEEESCHHHHGGGSCTTCE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCC--CeEEEEcCCHHHHHHHHHHHHhcC------CCeEEEecCHHHhhcccCCCce
Confidence 45788999999999999999977532 599999999999999999887755 5799999999888 7778899
Q ss_pred cceec
Q psy7834 132 DIIHV 136 (492)
Q Consensus 132 D~i~~ 136 (492)
|+|++
T Consensus 130 D~V~~ 134 (236)
T 1zx0_A 130 DGILY 134 (236)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99988
No 316
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.15 E-value=7.7e-12 Score=119.44 Aligned_cols=99 Identities=13% Similarity=0.015 Sum_probs=70.5
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE--EccCCCCCcCCCCc
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV--DGDGREGHAAEGPY 286 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~f 286 (492)
++++.+|||+|||+|.++..++++ ++|+|+|+|+ |+..++++..... ....++.++ ++|+..++ +++|
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~---~~~~~v~~~~~~~D~~~l~--~~~f 149 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVE---TFGWNLITFKSKVDVTKME--PFQA 149 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCC---CTTGGGEEEECSCCGGGCC--CCCC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhh---hcCCCeEEEeccCcHhhCC--CCCc
Confidence 567899999999999999999886 4699999999 6543322110000 001268999 99987643 5789
Q ss_pred cEEEecCcc----hh--------hHHHHHHHhccCC--eEEEEeC
Q psy7834 287 DVIYVGGAV----HH--------YPFKLMDQLKPGG--VMWFTIG 317 (492)
Q Consensus 287 D~i~s~~~~----~~--------~~~~~~~~L~pgG--~l~~~~~ 317 (492)
|+|+|+.+. +. +..++.++||||| .+++.+.
T Consensus 150 D~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 150 DTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 999998651 11 2346779999999 9988653
No 317
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.15 E-value=1.8e-10 Score=105.91 Aligned_cols=88 Identities=18% Similarity=0.309 Sum_probs=73.1
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
..+++.+. ...++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|++ .+. .+++++++|+.+
T Consensus 35 ~~~~~~l~-~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~----~~~-----~~~~~~~~d~~~ 101 (218)
T 3ou2_A 35 PAALERLR-AGNIRGDVLELASGTGYWTRHLSGLA---DRVTALDGSAEMIAEAGR----HGL-----DNVEFRQQDLFD 101 (218)
T ss_dssp HHHHHHHT-TTTSCSEEEEESCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHGG----GCC-----TTEEEEECCTTS
T ss_pred HHHHHHHh-cCCCCCeEEEECCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHh----cCC-----CCeEEEeccccc
Confidence 44555552 36677899999999999999999984 799999999999999998 233 589999999988
Q ss_pred CCCCCCcccceeccCccccccc
Q psy7834 124 GYLDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 124 ~~~~~~~~D~i~~~~~~~~l~~ 145 (492)
. +++++||+|+++.+++++.+
T Consensus 102 ~-~~~~~~D~v~~~~~l~~~~~ 122 (218)
T 3ou2_A 102 W-TPDRQWDAVFFAHWLAHVPD 122 (218)
T ss_dssp C-CCSSCEEEEEEESCGGGSCH
T ss_pred C-CCCCceeEEEEechhhcCCH
Confidence 8 67889999999887766544
No 318
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.15 E-value=5.7e-11 Score=111.98 Aligned_cols=85 Identities=22% Similarity=0.326 Sum_probs=71.1
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC-CCC--CC
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG-YLD--EA 129 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~--~~ 129 (492)
...++.+|||||||+|..+..+++..++.++|+++|+++++++.|++++++.++. ++++++++|+.+. +.. .+
T Consensus 60 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~----~~v~~~~~d~~~~l~~~~~~~ 135 (248)
T 3tfw_A 60 RLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVD----QRVTLREGPALQSLESLGECP 135 (248)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCT----TTEEEEESCHHHHHHTCCSCC
T ss_pred hhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHHhcCCCC
Confidence 4557899999999999999999998744689999999999999999999988873 5899999998763 222 34
Q ss_pred cccceeccCccc
Q psy7834 130 PYDIIHVGGSIE 141 (492)
Q Consensus 130 ~~D~i~~~~~~~ 141 (492)
+||+|++.....
T Consensus 136 ~fD~V~~d~~~~ 147 (248)
T 3tfw_A 136 AFDLIFIDADKP 147 (248)
T ss_dssp CCSEEEECSCGG
T ss_pred CeEEEEECCchH
Confidence 899999876543
No 319
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.14 E-value=1.8e-10 Score=106.56 Aligned_cols=86 Identities=24% Similarity=0.372 Sum_probs=72.5
Q ss_pred HHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC
Q psy7834 45 MVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG 124 (492)
Q Consensus 45 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 124 (492)
.+.+.+...+.++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.|+++....+ .+++++++|+.+.
T Consensus 27 ~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~ 97 (227)
T 1ve3_A 27 TLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE------SNVEFIVGDARKL 97 (227)
T ss_dssp HHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT------CCCEEEECCTTSC
T ss_pred HHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC------CCceEEECchhcC
Confidence 3444444345568899999999999999999985 499999999999999999987654 4799999999988
Q ss_pred CCCCCcccceeccCc
Q psy7834 125 YLDEAPYDIIHVGGS 139 (492)
Q Consensus 125 ~~~~~~~D~i~~~~~ 139 (492)
++++++||+|+++.+
T Consensus 98 ~~~~~~~D~v~~~~~ 112 (227)
T 1ve3_A 98 SFEDKTFDYVIFIDS 112 (227)
T ss_dssp CSCTTCEEEEEEESC
T ss_pred CCCCCcEEEEEEcCc
Confidence 877789999999866
No 320
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.14 E-value=5.3e-11 Score=118.71 Aligned_cols=92 Identities=23% Similarity=0.291 Sum_probs=76.9
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||||||+|.++..+++.. |..+++++|+ +.+++.|++ .++++|+.+|+.+ +.+.+ |+
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~D~~~-~~p~~--D~ 262 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQ-----------FPGVTHVGGDMFK-EVPSG--DT 262 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTT-CCCCC--SE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhh-----------cCCeEEEeCCcCC-CCCCC--CE
Confidence 4567899999999999999999987 7789999999 888877653 1479999999976 44443 99
Q ss_pred EEecCcchhhHH--------HHHHHhccCCeEEEEe
Q psy7834 289 IYVGGAVHHYPF--------KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 289 i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~ 316 (492)
|++..++|++++ +++++|||||+|++..
T Consensus 263 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 263 ILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 999999997753 6889999999999854
No 321
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.14 E-value=1.4e-10 Score=115.15 Aligned_cols=99 Identities=20% Similarity=0.304 Sum_probs=82.5
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.+..+|+|||||+|.++..++++. |..+++..|. |.+++.|+++.... ..++|+++.+|+.+.+. ..+|+
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~-----~~~rv~~~~gD~~~~~~--~~~D~ 247 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQ-----EEEQIDFQEGDFFKDPL--PEADL 247 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC-------CCSEEEEESCTTTSCC--CCCSE
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhc-----ccCceeeecCccccCCC--CCceE
Confidence 3456799999999999999999997 7889999997 88999999887643 35689999999876433 35899
Q ss_pred EEecCcchhhHH--------HHHHHhccCCeEEEEe
Q psy7834 289 IYVGGAVHHYPF--------KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 289 i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~ 316 (492)
+++..++|+.++ ++++.|+|||++++..
T Consensus 248 ~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 248 YILARVLHDWADGKCSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEE
Confidence 999999998764 6788999999999854
No 322
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.14 E-value=1.3e-10 Score=109.84 Aligned_cols=88 Identities=24% Similarity=0.375 Sum_probs=75.5
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
...+++.+ .+.++++|||+|||+|.++..+++..++.++|+++|+++++++.|+++++.+++. ++++++++|+.
T Consensus 82 ~~~i~~~~--~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~ 155 (255)
T 3mb5_A 82 AALIVAYA--GISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFD----DRVTIKLKDIY 155 (255)
T ss_dssp HHHHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCT----TTEEEECSCGG
T ss_pred HHHHHHhh--CCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCC----CceEEEECchh
Confidence 34566666 7888999999999999999999999656689999999999999999999888873 45999999998
Q ss_pred CCCCCCCcccceecc
Q psy7834 123 KGYLDEAPYDIIHVG 137 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~ 137 (492)
+. +++++||+|+++
T Consensus 156 ~~-~~~~~~D~v~~~ 169 (255)
T 3mb5_A 156 EG-IEEENVDHVILD 169 (255)
T ss_dssp GC-CCCCSEEEEEEC
T ss_pred hc-cCCCCcCEEEEC
Confidence 65 566789999873
No 323
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.14 E-value=1e-11 Score=116.66 Aligned_cols=85 Identities=25% Similarity=0.351 Sum_probs=72.0
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCC-----
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLD----- 127 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~----- 127 (492)
...++++|||+|||+|+.+..+++..++.++|+++|+++++++.|++++++.++. ++++++++|+.+....
T Consensus 57 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~----~~i~~~~gda~~~l~~~~~~~ 132 (242)
T 3r3h_A 57 RLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQE----HKIKLRLGPALDTLHSLLNEG 132 (242)
T ss_dssp HHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCT----TTEEEEESCHHHHHHHHHHHH
T ss_pred hhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHHHHhhcc
Confidence 4457789999999999999999998755689999999999999999999998874 6899999998765322
Q ss_pred -CCcccceeccCccc
Q psy7834 128 -EAPYDIIHVGGSIE 141 (492)
Q Consensus 128 -~~~~D~i~~~~~~~ 141 (492)
.++||+|++.....
T Consensus 133 ~~~~fD~V~~d~~~~ 147 (242)
T 3r3h_A 133 GEHQFDFIFIDADKT 147 (242)
T ss_dssp CSSCEEEEEEESCGG
T ss_pred CCCCEeEEEEcCChH
Confidence 47899999876543
No 324
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.14 E-value=2e-10 Score=106.74 Aligned_cols=90 Identities=21% Similarity=0.312 Sum_probs=75.5
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
.+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|+++....++......+++++++|+..+++++++||
T Consensus 27 ~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 103 (235)
T 3sm3_A 27 YLQEDDEILDIGCGSGKISLELASKG---YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFD 103 (235)
T ss_dssp HCCTTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEE
T ss_pred hCCCCCeEEEECCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCcee
Confidence 35578999999999999999999984 799999999999999999988766521112378999999999988889999
Q ss_pred ceeccCccccccc
Q psy7834 133 IIHVGGSIEDIPE 145 (492)
Q Consensus 133 ~i~~~~~~~~l~~ 145 (492)
+|++...++++.+
T Consensus 104 ~v~~~~~l~~~~~ 116 (235)
T 3sm3_A 104 FAVMQAFLTSVPD 116 (235)
T ss_dssp EEEEESCGGGCCC
T ss_pred EEEEcchhhcCCC
Confidence 9999877766543
No 325
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.14 E-value=2e-10 Score=108.59 Aligned_cols=81 Identities=22% Similarity=0.161 Sum_probs=67.5
Q ss_pred CCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC---CCC---CC
Q psy7834 56 EGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG---YLD---EA 129 (492)
Q Consensus 56 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~---~~ 129 (492)
++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.|+++++.+++. ++++++++|+.+. +++ ++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~~~ 139 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNLS----DLIKVVKVPQKTLLMDALKEESEI 139 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCTTCSSTTTSTTCCSC
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCCC----ccEEEEEcchhhhhhhhhhcccCC
Confidence 57799999999999999999875 3379999999999999999999988873 5699999998762 333 26
Q ss_pred cccceeccCccc
Q psy7834 130 PYDIIHVGGSIE 141 (492)
Q Consensus 130 ~~D~i~~~~~~~ 141 (492)
+||+|+++....
T Consensus 140 ~fD~i~~npp~~ 151 (254)
T 2h00_A 140 IYDFCMCNPPFF 151 (254)
T ss_dssp CBSEEEECCCCC
T ss_pred cccEEEECCCCc
Confidence 899999975543
No 326
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.14 E-value=4.2e-11 Score=119.96 Aligned_cols=92 Identities=17% Similarity=0.242 Sum_probs=77.2
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||||||+|.++..++++. +..+++++|+ +.|++.|++ .++++++.+|+.+ +.+. ||+
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~-~~~~--~D~ 270 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPP-----------LSGIEHVGGDMFA-SVPQ--GDA 270 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTT-CCCC--EEE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhh-----------cCCCEEEeCCccc-CCCC--CCE
Confidence 4567899999999999999999987 6789999999 999987653 1369999999976 3332 999
Q ss_pred EEecCcchhhHH--------HHHHHhccCCeEEEEe
Q psy7834 289 IYVGGAVHHYPF--------KLMDQLKPGGVMWFTI 316 (492)
Q Consensus 289 i~s~~~~~~~~~--------~~~~~L~pgG~l~~~~ 316 (492)
|++..++|++++ ++.++|||||++++..
T Consensus 271 v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 271 MILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999999997764 6789999999999863
No 327
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.14 E-value=3.7e-11 Score=120.07 Aligned_cols=88 Identities=18% Similarity=0.157 Sum_probs=78.4
Q ss_pred cccCCccccccchhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCC
Q psy7834 26 AHMQAPFQDNTKFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGN 105 (492)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~ 105 (492)
..+..|+|+|...+..+...+++++ ... +.+|||+|||+|.+++.+|+.. .+|+|+|+|+.|++.|++|++.++
T Consensus 186 ~~~~~F~Q~n~~~~~~l~~~~~~~~--~~~-~~~vLDl~cG~G~~~l~la~~~---~~V~gvd~~~~ai~~a~~n~~~ng 259 (369)
T 3bt7_A 186 QVENSFTQPNAAMNIQMLEWALDVT--KGS-KGDLLELYCGNGNFSLALARNF---DRVLATEIAKPSVAAAQYNIAANH 259 (369)
T ss_dssp EETTSCCCSBHHHHHHHHHHHHHHT--TTC-CSEEEEESCTTSHHHHHHGGGS---SEEEEECCCHHHHHHHHHHHHHTT
T ss_pred ECCCCeecCCHHHHHHHHHHHHHHh--hcC-CCEEEEccCCCCHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcC
Confidence 4578899999999999999998887 443 5789999999999999999875 799999999999999999999988
Q ss_pred CCccccCceEEEecCCCCC
Q psy7834 106 PEFVKDGRIKFVLGDGRKG 124 (492)
Q Consensus 106 ~~~~~~~~v~~~~~d~~~~ 124 (492)
+ .+++|+++|+++.
T Consensus 260 ~-----~~v~~~~~d~~~~ 273 (369)
T 3bt7_A 260 I-----DNVQIIRMAAEEF 273 (369)
T ss_dssp C-----CSEEEECCCSHHH
T ss_pred C-----CceEEEECCHHHH
Confidence 7 6899999998765
No 328
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.13 E-value=6.6e-11 Score=110.62 Aligned_cols=84 Identities=21% Similarity=0.164 Sum_probs=65.2
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHH---hCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWC---VGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGD 120 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~---~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 120 (492)
..+.+.+ ...++.+|||||||+|+.+..|++. .++.++|+|||++++|++.|+.. . .+++++++|
T Consensus 71 ~~l~~~l--~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~----~------~~v~~~~gD 138 (236)
T 2bm8_A 71 AVYHDML--WELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD----M------ENITLHQGD 138 (236)
T ss_dssp HHHHHHH--HHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG----C------TTEEEEECC
T ss_pred HHHHHHH--HhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc----C------CceEEEECc
Confidence 3444444 3346789999999999999999997 34568999999999999888721 1 689999999
Q ss_pred CCCC---CCC-CCcccceeccCc
Q psy7834 121 GRKG---YLD-EAPYDIIHVGGS 139 (492)
Q Consensus 121 ~~~~---~~~-~~~~D~i~~~~~ 139 (492)
+.+. +.. ..+||+|++...
T Consensus 139 ~~~~~~l~~~~~~~fD~I~~d~~ 161 (236)
T 2bm8_A 139 CSDLTTFEHLREMAHPLIFIDNA 161 (236)
T ss_dssp SSCSGGGGGGSSSCSSEEEEESS
T ss_pred chhHHHHHhhccCCCCEEEECCc
Confidence 9884 433 347999998665
No 329
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.13 E-value=1.7e-10 Score=111.04 Aligned_cols=89 Identities=21% Similarity=0.180 Sum_probs=76.4
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
..+++.+ ...++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++....++ +++++++|+.+
T Consensus 110 ~~~~~~~--~~~~~~~vLD~GcG~G~~~~~l~~~g---~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~ 178 (286)
T 3m70_A 110 GDVVDAA--KIISPCKVLDLGCGQGRNSLYLSLLG---YDVTSWDHNENSIAFLNETKEKENL------NISTALYDINA 178 (286)
T ss_dssp HHHHHHH--HHSCSCEEEEESCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTC------CEEEEECCGGG
T ss_pred HHHHHHh--hccCCCcEEEECCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHHcCC------ceEEEEecccc
Confidence 4555666 44578999999999999999999984 7999999999999999999887653 79999999998
Q ss_pred CCCCCCcccceeccCcccccc
Q psy7834 124 GYLDEAPYDIIHVGGSIEDIP 144 (492)
Q Consensus 124 ~~~~~~~~D~i~~~~~~~~l~ 144 (492)
.+. +++||+|+++.+++++.
T Consensus 179 ~~~-~~~fD~i~~~~~~~~~~ 198 (286)
T 3m70_A 179 ANI-QENYDFIVSTVVFMFLN 198 (286)
T ss_dssp CCC-CSCEEEEEECSSGGGSC
T ss_pred ccc-cCCccEEEEccchhhCC
Confidence 776 78999999998887654
No 330
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.13 E-value=1.5e-10 Score=110.05 Aligned_cols=87 Identities=21% Similarity=0.203 Sum_probs=72.0
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
..+.+.+.....++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++. .+++++++|+.+
T Consensus 38 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~ 104 (263)
T 3pfg_A 38 ADLAALVRRHSPKAASLLDVACGTGMHLRHLADSF---GTVEGLELSADMLAIARRRN----------PDAVLHHGDMRD 104 (263)
T ss_dssp HHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTS---SEEEEEESCHHHHHHHHHHC----------TTSEEEECCTTT
T ss_pred HHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhC----------CCCEEEECChHH
Confidence 34444444345567899999999999999999985 69999999999999999875 468999999999
Q ss_pred CCCCCCcccceeccC-cccccc
Q psy7834 124 GYLDEAPYDIIHVGG-SIEDIP 144 (492)
Q Consensus 124 ~~~~~~~~D~i~~~~-~~~~l~ 144 (492)
+++ +++||+|++.. +++++.
T Consensus 105 ~~~-~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 105 FSL-GRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp CCC-SCCEEEEEECTTGGGGSC
T ss_pred CCc-cCCcCEEEEcCchhhhcC
Confidence 877 68999999986 776653
No 331
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.13 E-value=1.4e-10 Score=109.81 Aligned_cols=85 Identities=18% Similarity=0.197 Sum_probs=72.2
Q ss_pred HHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC
Q psy7834 45 MVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG 124 (492)
Q Consensus 45 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 124 (492)
.+++.+ ...++.+|||+|||+|.++..+++.. +..+|+++|+|+.|++.|+++. .+++++++|+.++
T Consensus 24 ~l~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~~~ 90 (259)
T 2p35_A 24 DLLAQV--PLERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADRL----------PNTNFGKADLATW 90 (259)
T ss_dssp HHHTTC--CCSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHS----------TTSEEEECCTTTC
T ss_pred HHHHhc--CCCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC----------CCcEEEECChhhc
Confidence 444444 56678899999999999999999986 3479999999999999999872 6789999999988
Q ss_pred CCCCCcccceeccCccccc
Q psy7834 125 YLDEAPYDIIHVGGSIEDI 143 (492)
Q Consensus 125 ~~~~~~~D~i~~~~~~~~l 143 (492)
+ ++++||+|+++.+++.+
T Consensus 91 ~-~~~~fD~v~~~~~l~~~ 108 (259)
T 2p35_A 91 K-PAQKADLLYANAVFQWV 108 (259)
T ss_dssp C-CSSCEEEEEEESCGGGS
T ss_pred C-ccCCcCEEEEeCchhhC
Confidence 7 67899999998877654
No 332
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.13 E-value=7e-11 Score=117.41 Aligned_cols=92 Identities=16% Similarity=0.266 Sum_probs=77.3
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||||||+|.++..++++. |..+++++|+ +.|++.|++. ++++++.+|+.+ +.+ .||+
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-----------~~v~~~~~d~~~-~~p--~~D~ 249 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSGS-----------NNLTYVGGDMFT-SIP--NADA 249 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCB-----------TTEEEEECCTTT-CCC--CCSE
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhcccC-----------CCcEEEeccccC-CCC--CccE
Confidence 4567899999999999999999986 6779999999 9999877541 359999999865 333 3999
Q ss_pred EEecCcchhhHH--------HHHHHhcc---CCeEEEEe
Q psy7834 289 IYVGGAVHHYPF--------KLMDQLKP---GGVMWFTI 316 (492)
Q Consensus 289 i~s~~~~~~~~~--------~~~~~L~p---gG~l~~~~ 316 (492)
|++..++|++++ ++.++||| ||++++..
T Consensus 250 v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 250 VLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred EEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 999999997764 67899999 99999864
No 333
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.13 E-value=4.4e-11 Score=112.19 Aligned_cols=76 Identities=13% Similarity=0.192 Sum_probs=66.9
Q ss_pred CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCC---CCcc
Q psy7834 55 TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLD---EAPY 131 (492)
Q Consensus 55 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~ 131 (492)
.++.+|||+|||+|.++..++... +..+|+|+|+|+.|++.|+++.+..++ .+++++++|+.+++.. .++|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~~~f 142 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQL-----ENTTFCHDRAETFGQRKDVRESY 142 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTC-----SSEEEEESCHHHHTTCTTTTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCC-----CCEEEEeccHHHhcccccccCCc
Confidence 467899999999999999999864 457999999999999999999988877 5799999999887653 5789
Q ss_pred cceec
Q psy7834 132 DIIHV 136 (492)
Q Consensus 132 D~i~~ 136 (492)
|+|++
T Consensus 143 D~V~~ 147 (240)
T 1xdz_A 143 DIVTA 147 (240)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99987
No 334
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.13 E-value=1.5e-10 Score=109.27 Aligned_cols=83 Identities=19% Similarity=0.187 Sum_probs=72.0
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
...++.+|||+|||+|.++..+++... .+|+++|+|+.|++.|+++.... .+++++++|+.++++++++||
T Consensus 90 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~~~~~~~~fD 160 (254)
T 1xtp_A 90 PGHGTSRALDCGAGIGRITKNLLTKLY--ATTDLLEPVKHMLEEAKRELAGM-------PVGKFILASMETATLPPNTYD 160 (254)
T ss_dssp TTCCCSEEEEETCTTTHHHHHTHHHHC--SEEEEEESCHHHHHHHHHHTTTS-------SEEEEEESCGGGCCCCSSCEE
T ss_pred cccCCCEEEEECCCcCHHHHHHHHhhc--CEEEEEeCCHHHHHHHHHHhccC-------CceEEEEccHHHCCCCCCCeE
Confidence 455788999999999999999998852 68999999999999999987553 479999999999888888999
Q ss_pred ceeccCcccccc
Q psy7834 133 IIHVGGSIEDIP 144 (492)
Q Consensus 133 ~i~~~~~~~~l~ 144 (492)
+|++..+++++.
T Consensus 161 ~v~~~~~l~~~~ 172 (254)
T 1xtp_A 161 LIVIQWTAIYLT 172 (254)
T ss_dssp EEEEESCGGGSC
T ss_pred EEEEcchhhhCC
Confidence 999988877653
No 335
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.13 E-value=1.1e-10 Score=111.96 Aligned_cols=88 Identities=26% Similarity=0.401 Sum_probs=75.8
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcC-C-CCccccCceEEEecC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISG-N-PEFVKDGRIKFVLGD 120 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~-~-~~~~~~~~v~~~~~d 120 (492)
...+++.+ .+.++.+|||+|||+|.++..+++..++..+|+++|+++++++.|+++.+.. + +. .+++++++|
T Consensus 88 ~~~i~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~----~~v~~~~~d 161 (280)
T 1i9g_A 88 AAQIVHEG--DIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPP----DNWRLVVSD 161 (280)
T ss_dssp HHHHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCC----TTEEEECSC
T ss_pred HHHHHHHc--CCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCC----CcEEEEECc
Confidence 45666666 7888999999999999999999997656689999999999999999998775 4 21 689999999
Q ss_pred CCCCCCCCCcccceec
Q psy7834 121 GRKGYLDEAPYDIIHV 136 (492)
Q Consensus 121 ~~~~~~~~~~~D~i~~ 136 (492)
+.+.++++++||+|++
T Consensus 162 ~~~~~~~~~~~D~v~~ 177 (280)
T 1i9g_A 162 LADSELPDGSVDRAVL 177 (280)
T ss_dssp GGGCCCCTTCEEEEEE
T ss_pred hHhcCCCCCceeEEEE
Confidence 9988777788999987
No 336
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.13 E-value=8.4e-11 Score=113.88 Aligned_cols=86 Identities=19% Similarity=0.271 Sum_probs=70.8
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
.+++++.+ .+.++.+|||+|||+|.++..|++.. .+|+|+|+++.|++.|+++....++ ++++++++|+.
T Consensus 31 ~~~i~~~~--~~~~~~~VLDiG~G~G~lt~~La~~~---~~v~~vDi~~~~~~~a~~~~~~~~~-----~~v~~~~~D~~ 100 (299)
T 2h1r_A 31 LDKIIYAA--KIKSSDIVLEIGCGTGNLTVKLLPLA---KKVITIDIDSRMISEVKKRCLYEGY-----NNLEVYEGDAI 100 (299)
T ss_dssp HHHHHHHH--CCCTTCEEEEECCTTSTTHHHHTTTS---SEEEEECSCHHHHHHHHHHHHHTTC-----CCEEC----CC
T ss_pred HHHHHHhc--CCCCcCEEEEEcCcCcHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEECchh
Confidence 67777777 77888999999999999999999874 7999999999999999999877665 68999999998
Q ss_pred CCCCCCCcccceeccCcc
Q psy7834 123 KGYLDEAPYDIIHVGGSI 140 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~~~~ 140 (492)
+.++ .+||+|+++...
T Consensus 101 ~~~~--~~~D~Vv~n~py 116 (299)
T 2h1r_A 101 KTVF--PKFDVCTANIPY 116 (299)
T ss_dssp SSCC--CCCSEEEEECCG
T ss_pred hCCc--ccCCEEEEcCCc
Confidence 8765 489999986544
No 337
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.13 E-value=1.2e-10 Score=109.81 Aligned_cols=90 Identities=9% Similarity=0.011 Sum_probs=67.0
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
.+.+++.+ .+.++.+|||+|||+|.++..|++.. .+|+|+|+|+.|++.|+++..... -+..+...+..
T Consensus 34 ~~~il~~l--~l~~g~~VLDlGcGtG~~a~~La~~g---~~V~gvD~S~~ml~~Ar~~~~~~~------v~~~~~~~~~~ 102 (261)
T 3iv6_A 34 RENDIFLE--NIVPGSTVAVIGASTRFLIEKALERG---ASVTVFDFSQRMCDDLAEALADRC------VTIDLLDITAE 102 (261)
T ss_dssp HHHHHHTT--TCCTTCEEEEECTTCHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTSSSC------CEEEECCTTSC
T ss_pred HHHHHHhc--CCCCcCEEEEEeCcchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHhcc------ceeeeeecccc
Confidence 56677777 77889999999999999999999985 799999999999999999875531 12333333321
Q ss_pred CCCCCCCcccceeccCccccc
Q psy7834 123 KGYLDEAPYDIIHVGGSIEDI 143 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~~~~~~l 143 (492)
.....+++||+|+++..++++
T Consensus 103 ~~~~~~~~fD~Vv~~~~l~~~ 123 (261)
T 3iv6_A 103 IPKELAGHFDFVLNDRLINRF 123 (261)
T ss_dssp CCGGGTTCCSEEEEESCGGGS
T ss_pred cccccCCCccEEEEhhhhHhC
Confidence 011124689999998777553
No 338
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.13 E-value=6.5e-11 Score=111.48 Aligned_cols=92 Identities=20% Similarity=0.289 Sum_probs=73.8
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
..++..+. ...++++|||||||+|+.+..+++..++.++|+++|+++++++.|++++++.++. ++++++++|+.+
T Consensus 68 ~~ll~~l~-~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~----~~i~~~~gda~~ 142 (247)
T 1sui_A 68 GQFLSMLL-KLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVD----HKIDFREGPALP 142 (247)
T ss_dssp HHHHHHHH-HHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCG----GGEEEEESCHHH
T ss_pred HHHHHHHH-HhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CCeEEEECCHHH
Confidence 33444432 4456789999999999999999998754689999999999999999999988873 689999999876
Q ss_pred C-C-C-----CCCcccceeccCcc
Q psy7834 124 G-Y-L-----DEAPYDIIHVGGSI 140 (492)
Q Consensus 124 ~-~-~-----~~~~~D~i~~~~~~ 140 (492)
. + + ..++||+|++....
T Consensus 143 ~l~~l~~~~~~~~~fD~V~~d~~~ 166 (247)
T 1sui_A 143 VLDEMIKDEKNHGSYDFIFVDADK 166 (247)
T ss_dssp HHHHHHHSGGGTTCBSEEEECSCS
T ss_pred HHHHHHhccCCCCCEEEEEEcCch
Confidence 4 2 1 15789999987553
No 339
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.13 E-value=1.6e-10 Score=113.04 Aligned_cols=82 Identities=22% Similarity=0.182 Sum_probs=72.0
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
.+.++.+|||+|||+|.++..+++..+ .+|+|+|+|++|++.|+++....++. ++++++++|+.+++ ++||
T Consensus 87 ~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~---~~fD 157 (318)
T 2fk8_A 87 DLKPGMTLLDIGCGWGTTMRRAVERFD--VNVIGLTLSKNQHARCEQVLASIDTN----RSRQVLLQGWEDFA---EPVD 157 (318)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTSCCS----SCEEEEESCGGGCC---CCCS
T ss_pred CCCCcCEEEEEcccchHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCC----CceEEEECChHHCC---CCcC
Confidence 567889999999999999999999864 79999999999999999999888773 57999999998764 7899
Q ss_pred ceeccCccccc
Q psy7834 133 IIHVGGSIEDI 143 (492)
Q Consensus 133 ~i~~~~~~~~l 143 (492)
+|++..+++++
T Consensus 158 ~v~~~~~l~~~ 168 (318)
T 2fk8_A 158 RIVSIEAFEHF 168 (318)
T ss_dssp EEEEESCGGGT
T ss_pred EEEEeChHHhc
Confidence 99998777654
No 340
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.12 E-value=1.3e-10 Score=111.75 Aligned_cols=86 Identities=22% Similarity=0.266 Sum_probs=73.8
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
.+.++.+|||+|||+|.++..+++..+...+|+|+|+|+.|++.|+++....+ .+++++++|+.+.++ +++||
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~------~~v~~~~~d~~~~~~-~~~fD 91 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP------YDSEFLEGDATEIEL-NDKYD 91 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS------SEEEEEESCTTTCCC-SSCEE
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC------CceEEEEcchhhcCc-CCCee
Confidence 45678999999999999999999986434799999999999999999987654 489999999999877 47999
Q ss_pred ceeccCccccccc
Q psy7834 133 IIHVGGSIEDIPE 145 (492)
Q Consensus 133 ~i~~~~~~~~l~~ 145 (492)
+|++...++.+.+
T Consensus 92 ~v~~~~~l~~~~~ 104 (284)
T 3gu3_A 92 IAICHAFLLHMTT 104 (284)
T ss_dssp EEEEESCGGGCSS
T ss_pred EEEECChhhcCCC
Confidence 9999888776544
No 341
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.12 E-value=2e-10 Score=104.87 Aligned_cols=90 Identities=16% Similarity=0.164 Sum_probs=72.6
Q ss_pred hHHHHHHHHHHH-hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEec
Q psy7834 41 FQQAMVLDDLSE-ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLG 119 (492)
Q Consensus 41 ~~~~~~~~~l~~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 119 (492)
.+.+.+++.+.. ...++.+|||+|||+|.++..+++.. +..+|+++|+|+.+++.|+++....++ .+++++++
T Consensus 49 ~~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~~~~~ 122 (207)
T 1jsx_A 49 MLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKL-----ENIEPVQS 122 (207)
T ss_dssp HHHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTC-----SSEEEEEC
T ss_pred HHHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCC-----CCeEEEec
Confidence 344555665521 11247899999999999999999985 448999999999999999999988887 56999999
Q ss_pred CCCCCCCCCCcccceecc
Q psy7834 120 DGRKGYLDEAPYDIIHVG 137 (492)
Q Consensus 120 d~~~~~~~~~~~D~i~~~ 137 (492)
|+.+.+ +.++||+|+++
T Consensus 123 d~~~~~-~~~~~D~i~~~ 139 (207)
T 1jsx_A 123 RVEEFP-SEPPFDGVISR 139 (207)
T ss_dssp CTTTSC-CCSCEEEEECS
T ss_pred chhhCC-ccCCcCEEEEe
Confidence 998875 45789999873
No 342
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.12 E-value=9.8e-11 Score=106.58 Aligned_cols=76 Identities=22% Similarity=0.209 Sum_probs=68.1
Q ss_pred CCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccccee
Q psy7834 56 EGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDIIH 135 (492)
Q Consensus 56 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~ 135 (492)
.+.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++. .+++++++|+.++++++++||+|+
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~fD~v~ 107 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASLG---HQIEGLEPATRLVELARQTH----------PSVTFHHGTITDLSDSPKRWAGLL 107 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHTT---CCEEEECCCHHHHHHHHHHC----------TTSEEECCCGGGGGGSCCCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhC----------CCCeEEeCcccccccCCCCeEEEE
Confidence 37899999999999999999984 69999999999999999874 578999999999888889999999
Q ss_pred ccCcccccc
Q psy7834 136 VGGSIEDIP 144 (492)
Q Consensus 136 ~~~~~~~l~ 144 (492)
+..+++++.
T Consensus 108 ~~~~l~~~~ 116 (203)
T 3h2b_A 108 AWYSLIHMG 116 (203)
T ss_dssp EESSSTTCC
T ss_pred ehhhHhcCC
Confidence 988877654
No 343
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.12 E-value=1.3e-11 Score=113.12 Aligned_cols=91 Identities=19% Similarity=0.283 Sum_probs=57.1
Q ss_pred hhHHHHHHHHHHHhc-CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEe
Q psy7834 40 KFQQAMVLDDLSEEL-TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVL 118 (492)
Q Consensus 40 ~~~~~~~~~~l~~~~-~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 118 (492)
..+.+.+++.+ .. .++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.|+++...++. ++++++
T Consensus 15 ~~~~~~~~~~l--~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~ 85 (215)
T 4dzr_A 15 EVLVEEAIRFL--KRMPSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGA------VVDWAA 85 (215)
T ss_dssp HHHHHHHHHHH--TTCCTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC-------------------------CCH
T ss_pred HHHHHHHHHHh--hhcCCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCC------ceEEEE
Confidence 33445555554 22 678899999999999999999985 457999999999999999999876542 689999
Q ss_pred cCCCCCCCCC-----CcccceeccCcc
Q psy7834 119 GDGRKGYLDE-----APYDIIHVGGSI 140 (492)
Q Consensus 119 ~d~~~~~~~~-----~~~D~i~~~~~~ 140 (492)
+|+.+ ++++ ++||+|+++...
T Consensus 86 ~d~~~-~~~~~~~~~~~fD~i~~npp~ 111 (215)
T 4dzr_A 86 ADGIE-WLIERAERGRPWHAIVSNPPY 111 (215)
T ss_dssp HHHHH-HHHHHHHTTCCBSEEEECCCC
T ss_pred cchHh-hhhhhhhccCcccEEEECCCC
Confidence 99887 4554 899999997554
No 344
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.12 E-value=2.3e-10 Score=102.87 Aligned_cols=87 Identities=18% Similarity=0.256 Sum_probs=74.0
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCc--eEEEecC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGR--IKFVLGD 120 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~--v~~~~~d 120 (492)
.+.+++.+ ...++.+|||+|||+|.++..+++. + .+|+++|+++.+++.|+++....++ .+ ++++++|
T Consensus 41 ~~~l~~~~--~~~~~~~vLdiG~G~G~~~~~~~~~-~--~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~d 110 (194)
T 1dus_A 41 TKILVENV--VVDKDDDILDLGCGYGVIGIALADE-V--KSTTMADINRRAIKLAKENIKLNNL-----DNYDIRVVHSD 110 (194)
T ss_dssp HHHHHHHC--CCCTTCEEEEETCTTSHHHHHHGGG-S--SEEEEEESCHHHHHHHHHHHHHTTC-----TTSCEEEEECS
T ss_pred HHHHHHHc--ccCCCCeEEEeCCCCCHHHHHHHHc-C--CeEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECc
Confidence 46677776 6668899999999999999999998 3 8999999999999999999988776 44 9999999
Q ss_pred CCCCCCCCCcccceeccCcc
Q psy7834 121 GRKGYLDEAPYDIIHVGGSI 140 (492)
Q Consensus 121 ~~~~~~~~~~~D~i~~~~~~ 140 (492)
+.+. ...++||+|+++..+
T Consensus 111 ~~~~-~~~~~~D~v~~~~~~ 129 (194)
T 1dus_A 111 LYEN-VKDRKYNKIITNPPI 129 (194)
T ss_dssp TTTT-CTTSCEEEEEECCCS
T ss_pred hhcc-cccCCceEEEECCCc
Confidence 8874 446789999986544
No 345
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.12 E-value=6.7e-11 Score=116.90 Aligned_cols=95 Identities=19% Similarity=0.146 Sum_probs=74.8
Q ss_pred hhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhh-------cCCCCccccC
Q psy7834 40 KFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVI-------SGNPEFVKDG 112 (492)
Q Consensus 40 ~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~-------~~~~~~~~~~ 112 (492)
......+++.+ .+.++++|||||||+|.+++.+|...+ ..+|+|||+++.|++.|+++.+ .+++. ..
T Consensus 159 ~~~i~~il~~l--~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~---~~ 232 (438)
T 3uwp_A 159 FDLVAQMIDEI--KMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK---HA 232 (438)
T ss_dssp HHHHHHHHHHH--CCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC---CC
T ss_pred HHHHHHHHHhc--CCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC---CC
Confidence 33456777777 788999999999999999999998764 2469999999999999987642 23320 15
Q ss_pred ceEEEecCCCCCCCCC--CcccceeccCcc
Q psy7834 113 RIKFVLGDGRKGYLDE--APYDIIHVGGSI 140 (492)
Q Consensus 113 ~v~~~~~d~~~~~~~~--~~~D~i~~~~~~ 140 (492)
+++|+++|+.++++.+ ..||+|+++..+
T Consensus 233 rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~ 262 (438)
T 3uwp_A 233 EYTLERGDFLSEEWRERIANTSVIFVNNFA 262 (438)
T ss_dssp EEEEEECCTTSHHHHHHHHTCSEEEECCTT
T ss_pred CeEEEECcccCCccccccCCccEEEEcccc
Confidence 8999999999887643 479999987554
No 346
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.12 E-value=2e-10 Score=113.30 Aligned_cols=79 Identities=23% Similarity=0.308 Sum_probs=70.0
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
...++++|||||||+|.++..+++.. ..+|+|+|+|+ |++.|+++.+.+++. ++++++++|+.++++++++||
T Consensus 61 ~~~~~~~VLDiGcGtG~ls~~la~~g--~~~v~gvD~s~-~~~~a~~~~~~~~~~----~~i~~~~~d~~~~~~~~~~~D 133 (340)
T 2fyt_A 61 HIFKDKVVLDVGCGTGILSMFAAKAG--AKKVLGVDQSE-ILYQAMDIIRLNKLE----DTITLIKGKIEEVHLPVEKVD 133 (340)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEESST-HHHHHHHHHHHTTCT----TTEEEEESCTTTSCCSCSCEE
T ss_pred hhcCCCEEEEeeccCcHHHHHHHHcC--CCEEEEEChHH-HHHHHHHHHHHcCCC----CcEEEEEeeHHHhcCCCCcEE
Confidence 46788999999999999999999973 25999999996 999999999888874 689999999999888778999
Q ss_pred ceeccC
Q psy7834 133 IIHVGG 138 (492)
Q Consensus 133 ~i~~~~ 138 (492)
+|++..
T Consensus 134 ~Ivs~~ 139 (340)
T 2fyt_A 134 VIISEW 139 (340)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 999864
No 347
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.11 E-value=1.7e-10 Score=114.64 Aligned_cols=96 Identities=19% Similarity=0.125 Sum_probs=81.9
Q ss_pred hhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEE
Q psy7834 38 FSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFV 117 (492)
Q Consensus 38 ~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 117 (492)
....+.+.++.++ ...++.+|||+|||+|.+++.++...++..+|+|+|+++.|++.|+++++.+++ .+++++
T Consensus 187 l~~~la~~l~~~~--~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~-----~~i~~~ 259 (354)
T 3tma_A 187 LTPVLAQALLRLA--DARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL-----SWIRFL 259 (354)
T ss_dssp CCHHHHHHHHHHT--TCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC-----TTCEEE
T ss_pred cCHHHHHHHHHHh--CCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC-----CceEEE
Confidence 3344566666666 677889999999999999999999875668999999999999999999999887 589999
Q ss_pred ecCCCCCCCCCCcccceeccCcc
Q psy7834 118 LGDGRKGYLDEAPYDIIHVGGSI 140 (492)
Q Consensus 118 ~~d~~~~~~~~~~~D~i~~~~~~ 140 (492)
++|+.+++.+.++||+|+++...
T Consensus 260 ~~D~~~~~~~~~~~D~Ii~npPy 282 (354)
T 3tma_A 260 RADARHLPRFFPEVDRILANPPH 282 (354)
T ss_dssp ECCGGGGGGTCCCCSEEEECCCS
T ss_pred eCChhhCccccCCCCEEEECCCC
Confidence 99999988777789999986443
No 348
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.11 E-value=2e-10 Score=108.28 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=80.5
Q ss_pred cChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE
Q psy7834 193 SSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV 272 (492)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~ 272 (492)
..+.+...+++.+. +.++.+|||||||+|.+|..++++. ++|+|+|+|++|++.+++++.. .++++++
T Consensus 13 ~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~-------~~~v~~i 80 (255)
T 3tqs_A 13 HDSFVLQKIVSAIH--PQKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQ-------QKNITIY 80 (255)
T ss_dssp CCHHHHHHHHHHHC--CCTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTT-------CTTEEEE
T ss_pred cCHHHHHHHHHhcC--CCCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhh-------CCCcEEE
Confidence 45677788888875 6788999999999999999999874 4799999999999999998764 2479999
Q ss_pred EccCCCCCcC----CCCccEEEecCcchhhHHHHHHHhcc
Q psy7834 273 DGDGREGHAA----EGPYDVIYVGGAVHHYPFKLMDQLKP 308 (492)
Q Consensus 273 ~~d~~~~~~~----~~~fD~i~s~~~~~~~~~~~~~~L~p 308 (492)
++|+.....+ .++|| |++|...+--..-+.++|..
T Consensus 81 ~~D~~~~~~~~~~~~~~~~-vv~NlPY~is~~il~~ll~~ 119 (255)
T 3tqs_A 81 QNDALQFDFSSVKTDKPLR-VVGNLPYNISTPLLFHLFSQ 119 (255)
T ss_dssp ESCTTTCCGGGSCCSSCEE-EEEECCHHHHHHHHHHHHHT
T ss_pred EcchHhCCHHHhccCCCeE-EEecCCcccCHHHHHHHHhC
Confidence 9999876443 35688 78887654433455666653
No 349
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.11 E-value=2.1e-10 Score=107.34 Aligned_cols=89 Identities=18% Similarity=0.237 Sum_probs=73.8
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
..+.+.+ ...++.+|||+|||+|.++..+++.. . .+|+|+|+|+.|++.|+++... .+++++++|+.+
T Consensus 33 ~~l~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~ 100 (243)
T 3bkw_A 33 PALRAML--PEVGGLRIVDLGCGFGWFCRWAHEHG-A-SYVLGLDLSEKMLARARAAGPD--------TGITYERADLDK 100 (243)
T ss_dssp HHHHHHS--CCCTTCEEEEETCTTCHHHHHHHHTT-C-SEEEEEESCHHHHHHHHHTSCS--------SSEEEEECCGGG
T ss_pred HHHHHhc--cccCCCEEEEEcCcCCHHHHHHHHCC-C-CeEEEEcCCHHHHHHHHHhccc--------CCceEEEcChhh
Confidence 3455555 55678899999999999999999984 1 3999999999999999988644 478999999999
Q ss_pred CCCCCCcccceeccCcccccc
Q psy7834 124 GYLDEAPYDIIHVGGSIEDIP 144 (492)
Q Consensus 124 ~~~~~~~~D~i~~~~~~~~l~ 144 (492)
+++++++||+|++..+++++.
T Consensus 101 ~~~~~~~fD~v~~~~~l~~~~ 121 (243)
T 3bkw_A 101 LHLPQDSFDLAYSSLALHYVE 121 (243)
T ss_dssp CCCCTTCEEEEEEESCGGGCS
T ss_pred ccCCCCCceEEEEeccccccc
Confidence 887788999999987776543
No 350
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.11 E-value=1.4e-10 Score=115.78 Aligned_cols=96 Identities=16% Similarity=0.148 Sum_probs=78.4
Q ss_pred CCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc--CC------
Q psy7834 212 GAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA--AE------ 283 (492)
Q Consensus 212 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~------ 283 (492)
+.+|||+|||+|.++..+|+.. .+|+|+|+|+.|++.|++|++.++ ..+++|+.+|+.+... ..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~---~~V~gvd~~~~ai~~a~~n~~~ng-----~~~v~~~~~d~~~~~~~~~~~~~~~~ 285 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF---DRVLATEIAKPSVAAAQYNIAANH-----IDNVQIIRMAAEEFTQAMNGVREFNR 285 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS---SEEEEECCCHHHHHHHHHHHHHTT-----CCSEEEECCCSHHHHHHHSSCCCCTT
T ss_pred CCEEEEccCCCCHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcC-----CCceEEEECCHHHHHHHHhhcccccc
Confidence 6789999999999999998753 479999999999999999998864 3589999999865321 11
Q ss_pred --------CCccEEEecCcchhhHHHHHHHhccCCeEEEE
Q psy7834 284 --------GPYDVIYVGGAVHHYPFKLMDQLKPGGVMWFT 315 (492)
Q Consensus 284 --------~~fD~i~s~~~~~~~~~~~~~~L~pgG~l~~~ 315 (492)
.+||+|+++.....+..++.+.|+++|++++.
T Consensus 286 l~~~~~~~~~fD~Vv~dPPr~g~~~~~~~~l~~~g~ivyv 325 (369)
T 3bt7_A 286 LQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPRILYI 325 (369)
T ss_dssp GGGSCGGGCCEEEEEECCCTTCCCHHHHHHHTTSSEEEEE
T ss_pred ccccccccCCCCEEEECcCccccHHHHHHHHhCCCEEEEE
Confidence 37999999877655667888999998887664
No 351
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.11 E-value=2e-10 Score=110.15 Aligned_cols=78 Identities=26% Similarity=0.172 Sum_probs=68.7
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
.++++++|||+|||+|.++..+++... .+|+|+|+|+.|++.|+++++.+++. ++++++++|+.+.+. .++||
T Consensus 122 ~~~~~~~VLDlgcG~G~~~~~la~~~~--~~V~~vD~s~~~~~~a~~n~~~n~~~----~~v~~~~~D~~~~~~-~~~fD 194 (278)
T 2frn_A 122 VAKPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVE----DRMSAYNMDNRDFPG-ENIAD 194 (278)
T ss_dssp HCCTTCEEEETTCTTTTTHHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCT----TTEEEECSCTTTCCC-CSCEE
T ss_pred hCCCCCEEEEecccCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHcCCC----ceEEEEECCHHHhcc-cCCcc
Confidence 356789999999999999999999863 27999999999999999999988873 569999999998876 68899
Q ss_pred ceecc
Q psy7834 133 IIHVG 137 (492)
Q Consensus 133 ~i~~~ 137 (492)
+|+++
T Consensus 195 ~Vi~~ 199 (278)
T 2frn_A 195 RILMG 199 (278)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99873
No 352
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.11 E-value=1.7e-10 Score=108.21 Aligned_cols=90 Identities=17% Similarity=0.236 Sum_probs=74.0
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
.+.+++.+. ...++.+|||||||+|.++..+++.. .+|+|+|+|+.|++.|+++.. .+++++++|+.
T Consensus 30 ~~~~~~~l~-~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~---------~~v~~~~~d~~ 96 (250)
T 2p7i_A 30 HPFMVRAFT-PFFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLK---------DGITYIHSRFE 96 (250)
T ss_dssp HHHHHHHHG-GGCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSC---------SCEEEEESCGG
T ss_pred HHHHHHHHH-hhcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhh---------CCeEEEEccHH
Confidence 355666663 23567899999999999999999875 589999999999999998762 26899999998
Q ss_pred CCCCCCCcccceeccCcccccccc
Q psy7834 123 KGYLDEAPYDIIHVGGSIEDIPEG 146 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~~~~~~l~~~ 146 (492)
+. .++++||+|++..+++++.+.
T Consensus 97 ~~-~~~~~fD~v~~~~~l~~~~~~ 119 (250)
T 2p7i_A 97 DA-QLPRRYDNIVLTHVLEHIDDP 119 (250)
T ss_dssp GC-CCSSCEEEEEEESCGGGCSSH
T ss_pred Hc-CcCCcccEEEEhhHHHhhcCH
Confidence 87 467899999999988876543
No 353
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.11 E-value=2.2e-10 Score=115.16 Aligned_cols=89 Identities=26% Similarity=0.337 Sum_probs=75.5
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcC-----C-CCccccCceEEEecCCCCC---
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISG-----N-PEFVKDGRIKFVLGDGRKG--- 124 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~-----~-~~~~~~~~v~~~~~d~~~~--- 124 (492)
+.++.+|||+|||+|.++..+++..++..+|+|+|+|+.|++.|+++++++ | + ...+++|+++|++++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~---~~~~v~~~~~d~~~l~~~ 157 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSP---SRSNVRFLKGFIENLATA 157 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSST---TCCCEEEEESCTTCGGGC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhccccc---CCCceEEEEccHHHhhhc
Confidence 567899999999999999999998766689999999999999999987643 2 1 015899999999987
Q ss_pred ---CCCCCcccceeccCccccccc
Q psy7834 125 ---YLDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 125 ---~~~~~~~D~i~~~~~~~~l~~ 145 (492)
++++++||+|+++.+++.+.+
T Consensus 158 ~~~~~~~~~fD~V~~~~~l~~~~d 181 (383)
T 4fsd_A 158 EPEGVPDSSVDIVISNCVCNLSTN 181 (383)
T ss_dssp BSCCCCTTCEEEEEEESCGGGCSC
T ss_pred ccCCCCCCCEEEEEEccchhcCCC
Confidence 778889999999988876544
No 354
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.11 E-value=8e-10 Score=110.84 Aligned_cols=119 Identities=13% Similarity=0.049 Sum_probs=87.2
Q ss_pred ChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCC-------------------------------------C
Q psy7834 194 SPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGP-------------------------------------T 236 (492)
Q Consensus 194 ~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-------------------------------------~ 236 (492)
.+.+.+.++.... ..++.+|||.+||+|.+++.+|..... .
T Consensus 186 ~e~lAa~ll~l~~--~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 186 KETMAAALVLLTS--WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp CHHHHHHHHHHSC--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred cHHHHHHHHHHhC--CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 3344444444332 567889999999999999998877521 1
Q ss_pred CeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEEEecCcch----------hhHHHHHHHh
Q psy7834 237 GKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIYVGGAVH----------HYPFKLMDQL 306 (492)
Q Consensus 237 ~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~s~~~~~----------~~~~~~~~~L 306 (492)
.+|+|+|+|+.|++.|++|+..++ ...+++++++|+.+... ..+||+|++|..+. .+-.++.+.|
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~g----l~~~I~~~~~D~~~~~~-~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~l 338 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAG----LGDLITFRQLQVADFQT-EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVY 338 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTT----CTTCSEEEECCGGGCCC-CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcC----CCCceEEEECChHhCCC-CCCCCEEEECCCCccccCCchhHHHHHHHHHHHH
Confidence 469999999999999999998875 22469999999987554 35899999996542 1223455666
Q ss_pred cc--CCeEEEEeCCC
Q psy7834 307 KP--GGVMWFTIGNA 319 (492)
Q Consensus 307 ~p--gG~l~~~~~~~ 319 (492)
|+ ||.+++.++..
T Consensus 339 k~~~g~~~~iit~~~ 353 (393)
T 3k0b_A 339 KRMPTWSVYVLTSYE 353 (393)
T ss_dssp HTCTTCEEEEEECCT
T ss_pred hcCCCCEEEEEECCH
Confidence 65 99999877643
No 355
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.11 E-value=1.7e-10 Score=108.77 Aligned_cols=85 Identities=14% Similarity=0.127 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCC
Q psy7834 42 QQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDG 121 (492)
Q Consensus 42 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 121 (492)
+.+++++.+ .+.++.+|||||||+|.+|..|++.. .+|+++|++++|++.++++... . ++++++++|+
T Consensus 17 i~~~iv~~~--~~~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~--~-----~~v~~i~~D~ 84 (255)
T 3tqs_A 17 VLQKIVSAI--HPQKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQ--Q-----KNITIYQNDA 84 (255)
T ss_dssp HHHHHHHHH--CCCTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTT--C-----TTEEEEESCT
T ss_pred HHHHHHHhc--CCCCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhh--C-----CCcEEEEcch
Confidence 377888888 78889999999999999999999985 7999999999999999998865 2 6899999999
Q ss_pred CCCCCCC----CcccceeccCc
Q psy7834 122 RKGYLDE----APYDIIHVGGS 139 (492)
Q Consensus 122 ~~~~~~~----~~~D~i~~~~~ 139 (492)
.+.++++ ++|| |+++..
T Consensus 85 ~~~~~~~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 85 LQFDFSSVKTDKPLR-VVGNLP 105 (255)
T ss_dssp TTCCGGGSCCSSCEE-EEEECC
T ss_pred HhCCHHHhccCCCeE-EEecCC
Confidence 9987643 4677 666543
No 356
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.10 E-value=2e-10 Score=105.32 Aligned_cols=76 Identities=22% Similarity=0.209 Sum_probs=62.3
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC----CCCC
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG----YLDE 128 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~----~~~~ 128 (492)
.+.++.+|||+|||+|.++..+++.++ .++|+|+|+|+.|++.+.++.++. .++.++++|+... ++.
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~-------~~v~~~~~d~~~~~~~~~~~- 124 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER-------NNIIPLLFDASKPWKYSGIV- 124 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC-------SSEEEECSCTTCGGGTTTTC-
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC-------CCeEEEEcCCCCchhhcccc-
Confidence 456889999999999999999999875 579999999999887766655442 5789999998763 333
Q ss_pred Ccccceecc
Q psy7834 129 APYDIIHVG 137 (492)
Q Consensus 129 ~~~D~i~~~ 137 (492)
++||+|+++
T Consensus 125 ~~fD~V~~~ 133 (210)
T 1nt2_A 125 EKVDLIYQD 133 (210)
T ss_dssp CCEEEEEEC
T ss_pred cceeEEEEe
Confidence 789999884
No 357
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.10 E-value=2.6e-10 Score=112.84 Aligned_cols=101 Identities=20% Similarity=0.244 Sum_probs=81.4
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCC----CeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCC
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPT----GKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGP 285 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~----~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 285 (492)
.++.+|||+|||+|.++..+++..... .+++|+|+++.+++.|+.++...+ . ++.++++|..... ..++
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g-----~-~~~i~~~D~l~~~-~~~~ 201 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR-----Q-KMTLLHQDGLANL-LVDP 201 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT-----C-CCEEEESCTTSCC-CCCC
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC-----C-CceEEECCCCCcc-ccCC
Confidence 356899999999999999999887322 689999999999999999988654 2 5789999986533 4568
Q ss_pred ccEEEecCcchh------------------------hHHHHHHHhccCCeEEEEeC
Q psy7834 286 YDVIYVGGAVHH------------------------YPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 286 fD~i~s~~~~~~------------------------~~~~~~~~L~pgG~l~~~~~ 317 (492)
||+|+++..+.. +...+.+.|+|||++++.++
T Consensus 202 fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 202 VDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp EEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 999999976432 23467899999999999774
No 358
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.10 E-value=2.5e-10 Score=108.35 Aligned_cols=87 Identities=16% Similarity=0.153 Sum_probs=73.9
Q ss_pred hhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEec
Q psy7834 40 KFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLG 119 (492)
Q Consensus 40 ~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 119 (492)
..+.+++++.+ .+.++ +|||||||+|.+|..|++.. .+|+|+|+|++|++.++++... .+++++++
T Consensus 33 ~~i~~~Iv~~~--~~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~--------~~v~vi~~ 98 (271)
T 3fut_A 33 EAHLRRIVEAA--RPFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSG--------LPVRLVFQ 98 (271)
T ss_dssp HHHHHHHHHHH--CCCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTT--------SSEEEEES
T ss_pred HHHHHHHHHhc--CCCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCC--------CCEEEEEC
Confidence 34478888888 78888 99999999999999999986 7999999999999999998753 58999999
Q ss_pred CCCCCCCCC-CcccceeccCcc
Q psy7834 120 DGRKGYLDE-APYDIIHVGGSI 140 (492)
Q Consensus 120 d~~~~~~~~-~~~D~i~~~~~~ 140 (492)
|+.+.++++ ..+|.|+++...
T Consensus 99 D~l~~~~~~~~~~~~iv~NlPy 120 (271)
T 3fut_A 99 DALLYPWEEVPQGSLLVANLPY 120 (271)
T ss_dssp CGGGSCGGGSCTTEEEEEEECS
T ss_pred ChhhCChhhccCccEEEecCcc
Confidence 999887654 268888887554
No 359
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.10 E-value=2.8e-10 Score=107.58 Aligned_cols=86 Identities=33% Similarity=0.494 Sum_probs=75.1
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcC-CCCccccCceEEEecCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISG-NPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~-~~~~~~~~~v~~~~~d~~ 122 (492)
..+++.+ .+.++.+|||+|||+|.++..+++..++.++|+++|+++.+++.|+++.+.+ +. .+++++++|+.
T Consensus 86 ~~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~-----~~v~~~~~d~~ 158 (258)
T 2pwy_A 86 SAMVTLL--DLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV-----ENVRFHLGKLE 158 (258)
T ss_dssp HHHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC-----CCEEEEESCGG
T ss_pred HHHHHHc--CCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-----CCEEEEECchh
Confidence 4566666 7788999999999999999999998655689999999999999999998776 54 68999999998
Q ss_pred CCCCCCCcccceec
Q psy7834 123 KGYLDEAPYDIIHV 136 (492)
Q Consensus 123 ~~~~~~~~~D~i~~ 136 (492)
+.++++++||+|++
T Consensus 159 ~~~~~~~~~D~v~~ 172 (258)
T 2pwy_A 159 EAELEEAAYDGVAL 172 (258)
T ss_dssp GCCCCTTCEEEEEE
T ss_pred hcCCCCCCcCEEEE
Confidence 88677788999987
No 360
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.10 E-value=3.8e-10 Score=109.01 Aligned_cols=83 Identities=18% Similarity=0.167 Sum_probs=71.4
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCC-CCCcc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYL-DEAPY 131 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~ 131 (492)
.+.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|+++....++. .+++++++|+.+.++ .+++|
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~f 134 (298)
T 1ri5_A 61 YTKRGDSVLDLGCGKGGDLLKYERAG--IGEYYGVDIAEVSINDARVRARNMKRR----FKVFFRAQDSYGRHMDLGKEF 134 (298)
T ss_dssp HCCTTCEEEEETCTTTTTHHHHHHHT--CSEEEEEESCHHHHHHHHHHHHTSCCS----SEEEEEESCTTTSCCCCSSCE
T ss_pred hCCCCCeEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhcCCC----ccEEEEECCccccccCCCCCc
Confidence 35688999999999999999998874 259999999999999999998877653 579999999998877 57899
Q ss_pred cceeccCccc
Q psy7834 132 DIIHVGGSIE 141 (492)
Q Consensus 132 D~i~~~~~~~ 141 (492)
|+|++..+++
T Consensus 135 D~v~~~~~l~ 144 (298)
T 1ri5_A 135 DVISSQFSFH 144 (298)
T ss_dssp EEEEEESCGG
T ss_pred CEEEECchhh
Confidence 9999976553
No 361
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.10 E-value=2e-10 Score=104.98 Aligned_cols=91 Identities=23% Similarity=0.184 Sum_probs=71.3
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
.++++.+. ...++.+|||+|||+|.++..+....+ .+|+|+|+|+.|++.|+++....+ .+++++++|+.+
T Consensus 12 ~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~ 82 (209)
T 2p8j_A 12 YRFLKYCN-ESNLDKTVLDCGAGGDLPPLSIFVEDG--YKTYGIEISDLQLKKAENFSRENN------FKLNISKGDIRK 82 (209)
T ss_dssp HHHHHHHH-HSSSCSEEEEESCCSSSCTHHHHHHTT--CEEEEEECCHHHHHHHHHHHHHHT------CCCCEEECCTTS
T ss_pred HHHHHHHh-ccCCCCEEEEECCCCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcC------CceEEEECchhh
Confidence 44555543 456788999999999998554443333 799999999999999999886644 468999999999
Q ss_pred CCCCCCcccceeccCccccc
Q psy7834 124 GYLDEAPYDIIHVGGSIEDI 143 (492)
Q Consensus 124 ~~~~~~~~D~i~~~~~~~~l 143 (492)
+++++++||+|++..+++++
T Consensus 83 ~~~~~~~fD~v~~~~~l~~~ 102 (209)
T 2p8j_A 83 LPFKDESMSFVYSYGTIFHM 102 (209)
T ss_dssp CCSCTTCEEEEEECSCGGGS
T ss_pred CCCCCCceeEEEEcChHHhC
Confidence 88878899999997666543
No 362
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.10 E-value=1.7e-10 Score=109.56 Aligned_cols=83 Identities=14% Similarity=0.147 Sum_probs=70.9
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhc---CCCCccccCceEEEecCCCCC-----
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVIS---GNPEFVKDGRIKFVLGDGRKG----- 124 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~---~~~~~~~~~~v~~~~~d~~~~----- 124 (492)
...++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|++++.. +++. ++++++++|+.+.
T Consensus 33 ~~~~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~----~~v~~~~~D~~~~~~~~~ 107 (260)
T 2ozv_A 33 ADDRACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAFS----ARIEVLEADVTLRAKARV 107 (260)
T ss_dssp CCCSCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTTG----GGEEEEECCTTCCHHHHH
T ss_pred cccCCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCCc----ceEEEEeCCHHHHhhhhh
Confidence 45677899999999999999999986 457999999999999999999988 7773 5799999999886
Q ss_pred --CCCCCcccceeccCcc
Q psy7834 125 --YLDEAPYDIIHVGGSI 140 (492)
Q Consensus 125 --~~~~~~~D~i~~~~~~ 140 (492)
.+++++||+|+++-..
T Consensus 108 ~~~~~~~~fD~Vv~nPPy 125 (260)
T 2ozv_A 108 EAGLPDEHFHHVIMNPPY 125 (260)
T ss_dssp HTTCCTTCEEEEEECCCC
T ss_pred hhccCCCCcCEEEECCCC
Confidence 2456789999996433
No 363
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.10 E-value=1.8e-11 Score=109.03 Aligned_cols=82 Identities=18% Similarity=0.231 Sum_probs=69.5
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc---CCCC
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA---AEGP 285 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~ 285 (492)
+++|.+|||+|||+ | ++|+|+.|++.|+++... +++++++|+.+.+. ++++
T Consensus 10 ~~~g~~vL~~~~g~----------------v-~vD~s~~ml~~a~~~~~~---------~~~~~~~d~~~~~~~~~~~~~ 63 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------S-PVEALKGLVDKLQALTGN---------EGRVSVENIKQLLQSAHKESS 63 (176)
T ss_dssp CCTTSEEEEEECTT----------------S-CHHHHHHHHHHHHHHTTT---------TSEEEEEEGGGGGGGCCCSSC
T ss_pred CCCCCEEEEecCCc----------------e-eeeCCHHHHHHHHHhccc---------CcEEEEechhcCccccCCCCC
Confidence 67899999999996 1 389999999999988532 47999999987665 6789
Q ss_pred ccEEEecCcchhh-H------HHHHHHhccCCeEEEEe
Q psy7834 286 YDVIYVGGAVHHY-P------FKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 286 fD~i~s~~~~~~~-~------~~~~~~L~pgG~l~~~~ 316 (492)
||+|+++.++||+ + .+++++|||||++++..
T Consensus 64 fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 64 FDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp EEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEc
Confidence 9999999999988 4 38999999999999953
No 364
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.10 E-value=4.6e-10 Score=108.87 Aligned_cols=79 Identities=16% Similarity=0.209 Sum_probs=68.1
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCC---CC
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAE---GP 285 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~---~~ 285 (492)
+++|.+|||+|||+|..|..+++..++.++|+++|+++.+++.+++|+++.+ ..+++++++|+....... ++
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g-----~~~v~~~~~D~~~~~~~~~~~~~ 174 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG-----VSCCELAEEDFLAVSPSDPRYHE 174 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEECCGGGSCTTCGGGTT
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-----CCeEEEEeCChHhcCccccccCC
Confidence 6789999999999999999999987667899999999999999999999864 457999999987654321 57
Q ss_pred ccEEEec
Q psy7834 286 YDVIYVG 292 (492)
Q Consensus 286 fD~i~s~ 292 (492)
||.|+++
T Consensus 175 fD~Vl~D 181 (309)
T 2b9e_A 175 VHYILLD 181 (309)
T ss_dssp EEEEEEC
T ss_pred CCEEEEc
Confidence 9999975
No 365
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.09 E-value=7.9e-11 Score=109.00 Aligned_cols=85 Identities=22% Similarity=0.384 Sum_probs=70.6
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCC-----
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLD----- 127 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~----- 127 (492)
...++.+|||+|||+|..+..+++..++.++|+++|+++.+++.|++++.+.++. ++++++++|+.+....
T Consensus 55 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~ 130 (223)
T 3duw_A 55 QIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLN----DRVEVRTGLALDSLQQIENEK 130 (223)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCHHHHHHHHHHTT
T ss_pred HhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHHHHHhcC
Confidence 4457889999999999999999998744589999999999999999999988873 5699999998654211
Q ss_pred CCcccceeccCccc
Q psy7834 128 EAPYDIIHVGGSIE 141 (492)
Q Consensus 128 ~~~~D~i~~~~~~~ 141 (492)
.++||+|++.....
T Consensus 131 ~~~fD~v~~d~~~~ 144 (223)
T 3duw_A 131 YEPFDFIFIDADKQ 144 (223)
T ss_dssp CCCCSEEEECSCGG
T ss_pred CCCcCEEEEcCCcH
Confidence 16799999876644
No 366
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.09 E-value=1.2e-10 Score=110.49 Aligned_cols=82 Identities=26% Similarity=0.325 Sum_probs=71.1
Q ss_pred hcC-CCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC--CCCC
Q psy7834 53 ELT-EGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY--LDEA 129 (492)
Q Consensus 53 ~~~-~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~ 129 (492)
.+. ++.+|||+|||+|.++..+++..+ .+|+|+|+++.+++.|++++..+++. ++++++++|+.+.+ ++.+
T Consensus 45 ~~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~----~~v~~~~~D~~~~~~~~~~~ 118 (259)
T 3lpm_A 45 YLPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLE----DQIEIIEYDLKKITDLIPKE 118 (259)
T ss_dssp CCCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCT----TTEEEECSCGGGGGGTSCTT
T ss_pred cCCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCc----ccEEEEECcHHHhhhhhccC
Confidence 555 789999999999999999999853 49999999999999999999988874 57999999998875 3468
Q ss_pred cccceeccCcc
Q psy7834 130 PYDIIHVGGSI 140 (492)
Q Consensus 130 ~~D~i~~~~~~ 140 (492)
+||+|+++...
T Consensus 119 ~fD~Ii~npPy 129 (259)
T 3lpm_A 119 RADIVTCNPPY 129 (259)
T ss_dssp CEEEEEECCCC
T ss_pred CccEEEECCCC
Confidence 99999996544
No 367
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.09 E-value=3e-10 Score=114.50 Aligned_cols=92 Identities=18% Similarity=0.198 Sum_probs=73.3
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHH-------HHhhhcCCCCccccCceE
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRA-------THNVISGNPEFVKDGRIK 115 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a-------~~~~~~~~~~~~~~~~v~ 115 (492)
.+.+++.+ .+.++.+|||+|||+|.++..+|+..+ ..+|+|||+++.+++.| +++++..++. ..+++
T Consensus 231 v~~ml~~l--~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~---~~nV~ 304 (433)
T 1u2z_A 231 LSDVYQQC--QLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMR---LNNVE 304 (433)
T ss_dssp HHHHHHHT--TCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC---CCCEE
T ss_pred HHHHHHhc--CCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC---CCceE
Confidence 56777777 788899999999999999999999874 25899999999999888 8888877731 06899
Q ss_pred EEecCCCCCC--C--CCCcccceeccCcc
Q psy7834 116 FVLGDGRKGY--L--DEAPYDIIHVGGSI 140 (492)
Q Consensus 116 ~~~~d~~~~~--~--~~~~~D~i~~~~~~ 140 (492)
++++|....+ + ..++||+|+++..+
T Consensus 305 ~i~gD~~~~~~~~~~~~~~FDvIvvn~~l 333 (433)
T 1u2z_A 305 FSLKKSFVDNNRVAELIPQCDVILVNNFL 333 (433)
T ss_dssp EEESSCSTTCHHHHHHGGGCSEEEECCTT
T ss_pred EEEcCccccccccccccCCCCEEEEeCcc
Confidence 9998765321 1 24789999986444
No 368
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.09 E-value=1.7e-10 Score=102.18 Aligned_cols=80 Identities=20% Similarity=0.186 Sum_probs=64.0
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
..+++.+.....++.+|||+|||+|.++..+++.. +|+|+|+|+.|++. . .+++++++|+.+
T Consensus 11 ~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~------~--------~~~~~~~~d~~~ 72 (170)
T 3q87_B 11 YTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES------H--------RGGNLVRADLLC 72 (170)
T ss_dssp HHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT------C--------SSSCEEECSTTT
T ss_pred HHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc------c--------cCCeEEECChhh
Confidence 45556552112577899999999999999999874 99999999999987 1 578999999987
Q ss_pred CCCCCCcccceeccCcccc
Q psy7834 124 GYLDEAPYDIIHVGGSIED 142 (492)
Q Consensus 124 ~~~~~~~~D~i~~~~~~~~ 142 (492)
++++++||+|+++.....
T Consensus 73 -~~~~~~fD~i~~n~~~~~ 90 (170)
T 3q87_B 73 -SINQESVDVVVFNPPYVP 90 (170)
T ss_dssp -TBCGGGCSEEEECCCCBT
T ss_pred -hcccCCCCEEEECCCCcc
Confidence 556689999999765543
No 369
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.09 E-value=2.4e-10 Score=113.32 Aligned_cols=80 Identities=29% Similarity=0.295 Sum_probs=70.4
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
.+.++++|||+|||+|.++..+++.. ..+|+|+|+| +|++.|+++.+.+++. ++++++++|++++++++++||
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~g--~~~v~gvD~s-~~l~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~fD 135 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKAG--ARKVIGIECS-SISDYAVKIVKANKLD----HVVTIIKGKVEEVELPVEKVD 135 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHTT--CSEEEEEECS-THHHHHHHHHHHTTCT----TTEEEEESCTTTCCCSSSCEE
T ss_pred ccCCCCEEEEEeccchHHHHHHHHCC--CCEEEEECcH-HHHHHHHHHHHHcCCC----CcEEEEECcHHHccCCCCceE
Confidence 45688999999999999999999983 2699999999 5999999999988874 569999999999988889999
Q ss_pred ceeccCc
Q psy7834 133 IIHVGGS 139 (492)
Q Consensus 133 ~i~~~~~ 139 (492)
+|++...
T Consensus 136 ~Iis~~~ 142 (349)
T 3q7e_A 136 IIISEWM 142 (349)
T ss_dssp EEEECCC
T ss_pred EEEEccc
Confidence 9998643
No 370
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.09 E-value=8.6e-11 Score=109.88 Aligned_cols=76 Identities=17% Similarity=0.087 Sum_probs=64.9
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC--CCCCCcc
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG--YLDEAPY 131 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~ 131 (492)
..+|.+|||||||+|..+..+++..+ .+|++||+|++|++.|+++....+ .+++++.+|+.+. .+++++|
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~------~~~~~~~~~a~~~~~~~~~~~F 129 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQT------HKVIPLKGLWEDVAPTLPDGHF 129 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCS------SEEEEEESCHHHHGGGSCTTCE
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCC------CceEEEeehHHhhcccccccCC
Confidence 46789999999999999999998743 689999999999999999988765 4789999998764 3567889
Q ss_pred cceecc
Q psy7834 132 DIIHVG 137 (492)
Q Consensus 132 D~i~~~ 137 (492)
|.|++.
T Consensus 130 D~i~~D 135 (236)
T 3orh_A 130 DGILYD 135 (236)
T ss_dssp EEEEEC
T ss_pred ceEEEe
Confidence 999764
No 371
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.09 E-value=2.1e-10 Score=114.73 Aligned_cols=96 Identities=22% Similarity=0.232 Sum_probs=80.1
Q ss_pred cchhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceE
Q psy7834 36 TKFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIK 115 (492)
Q Consensus 36 ~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~ 115 (492)
..+...+.+.++..+ ..++.+|||+|||+|.+++.++... ..++|+|+|+|+.|++.|+++++.+++. ++++
T Consensus 200 a~l~~~la~~l~~~~---~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~gl~----~~i~ 271 (373)
T 3tm4_A 200 AHLKASIANAMIELA---ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAGVL----DKIK 271 (373)
T ss_dssp TCCCHHHHHHHHHHH---TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTTCG----GGCE
T ss_pred CCccHHHHHHHHHhh---cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcCCC----CceE
Confidence 334455566666554 5678899999999999999999985 3459999999999999999999998874 6899
Q ss_pred EEecCCCCCCCCCCcccceeccCc
Q psy7834 116 FVLGDGRKGYLDEAPYDIIHVGGS 139 (492)
Q Consensus 116 ~~~~d~~~~~~~~~~~D~i~~~~~ 139 (492)
++++|+.+++.++++||+|+++..
T Consensus 272 ~~~~D~~~~~~~~~~fD~Ii~npP 295 (373)
T 3tm4_A 272 FIQGDATQLSQYVDSVDFAISNLP 295 (373)
T ss_dssp EEECCGGGGGGTCSCEEEEEEECC
T ss_pred EEECChhhCCcccCCcCEEEECCC
Confidence 999999998877789999998544
No 372
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.09 E-value=2.4e-10 Score=115.81 Aligned_cols=95 Identities=28% Similarity=0.294 Sum_probs=79.7
Q ss_pred cccCCccccccchhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCC
Q psy7834 26 AHMQAPFQDNTKFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGN 105 (492)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~ 105 (492)
..+..++|+|...+..+.+.+++ +.++.+|||+|||+|.++..+|+.. .+|+|+|+|++|++.|+++++.++
T Consensus 265 ~~~~~F~q~n~~~~e~l~~~~~~-----~~~~~~VLDlgcG~G~~sl~la~~~---~~V~gvD~s~~ai~~A~~n~~~ng 336 (425)
T 2jjq_A 265 IHPNSFFQTNSYQAVNLVRKVSE-----LVEGEKILDMYSGVGTFGIYLAKRG---FNVKGFDSNEFAIEMARRNVEINN 336 (425)
T ss_dssp ECTTSCCCSBHHHHHHHHHHHHH-----HCCSSEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHT
T ss_pred EccccccccCHHHHHHHHHHhhc-----cCCCCEEEEeeccchHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcC
Confidence 44567888777777777666655 4577899999999999999999975 799999999999999999998877
Q ss_pred CCccccCceEEEecCCCCCCCCCCcccceec
Q psy7834 106 PEFVKDGRIKFVLGDGRKGYLDEAPYDIIHV 136 (492)
Q Consensus 106 ~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~ 136 (492)
+ . ++|+++|+++.... +||+|++
T Consensus 337 l-----~-v~~~~~d~~~~~~~--~fD~Vv~ 359 (425)
T 2jjq_A 337 V-----D-AEFEVASDREVSVK--GFDTVIV 359 (425)
T ss_dssp C-----C-EEEEECCTTTCCCT--TCSEEEE
T ss_pred C-----c-EEEEECChHHcCcc--CCCEEEE
Confidence 6 5 99999999887532 8999977
No 373
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.09 E-value=2.7e-10 Score=109.27 Aligned_cols=85 Identities=22% Similarity=0.413 Sum_probs=72.8
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
..+++.+ .+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++. .+++++++|+.+
T Consensus 47 ~~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~ 111 (279)
T 3ccf_A 47 EDLLQLL--NPQPGEFILDLGCGTGQLTEKIAQSG---AEVLGTDNAATMIEKARQNY----------PHLHFDVADARN 111 (279)
T ss_dssp CHHHHHH--CCCTTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHC----------TTSCEEECCTTT
T ss_pred HHHHHHh--CCCCCCEEEEecCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHhhC----------CCCEEEECChhh
Confidence 4566666 67788999999999999999999943 79999999999999999875 468899999999
Q ss_pred CCCCCCcccceeccCcccccc
Q psy7834 124 GYLDEAPYDIIHVGGSIEDIP 144 (492)
Q Consensus 124 ~~~~~~~~D~i~~~~~~~~l~ 144 (492)
+++ +++||+|++..+++.+.
T Consensus 112 ~~~-~~~fD~v~~~~~l~~~~ 131 (279)
T 3ccf_A 112 FRV-DKPLDAVFSNAMLHWVK 131 (279)
T ss_dssp CCC-SSCEEEEEEESCGGGCS
T ss_pred CCc-CCCcCEEEEcchhhhCc
Confidence 876 57999999988876654
No 374
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.08 E-value=1.2e-10 Score=109.22 Aligned_cols=83 Identities=16% Similarity=0.121 Sum_probs=71.6
Q ss_pred CCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccccee
Q psy7834 56 EGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDIIH 135 (492)
Q Consensus 56 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~ 135 (492)
++.+|||+|||+|.++..+++... .+|+++|+|+.|++.|+++....+. .+++++++|+.++++++++||+|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~ 151 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLF--REVDMVDITEDFLVQAKTYLGEEGK-----RVRNYFCCGLQDFTPEPDSYDVIW 151 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTC--SEEEEEESCHHHHHHHHHHTGGGGG-----GEEEEEECCGGGCCCCSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHhhhcCC-----ceEEEEEcChhhcCCCCCCEEEEE
Confidence 578999999999999999988752 6999999999999999999876532 579999999998888778999999
Q ss_pred ccCccccccc
Q psy7834 136 VGGSIEDIPE 145 (492)
Q Consensus 136 ~~~~~~~l~~ 145 (492)
+..+++++.+
T Consensus 152 ~~~~l~~~~~ 161 (241)
T 2ex4_A 152 IQWVIGHLTD 161 (241)
T ss_dssp EESCGGGSCH
T ss_pred EcchhhhCCH
Confidence 9887766544
No 375
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.08 E-value=1.8e-10 Score=107.44 Aligned_cols=78 Identities=23% Similarity=0.228 Sum_probs=66.0
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC---CCCCCC
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK---GYLDEA 129 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~---~~~~~~ 129 (492)
.+.++.+|||+|||+|.++..+++..++.++|+|+|+|+.|++.+.++++++ .+++++++|+.+ ++...+
T Consensus 74 ~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-------~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 74 HIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-------TNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-------TTEEEECSCTTCGGGGGGGCC
T ss_pred cCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-------CCeEEEEcccCChhhhcccCC
Confidence 4678899999999999999999999766689999999999888888777653 479999999987 334567
Q ss_pred cccceecc
Q psy7834 130 PYDIIHVG 137 (492)
Q Consensus 130 ~~D~i~~~ 137 (492)
+||+|+++
T Consensus 147 ~~D~V~~~ 154 (233)
T 2ipx_A 147 MVDVIFAD 154 (233)
T ss_dssp CEEEEEEC
T ss_pred cEEEEEEc
Confidence 89999984
No 376
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.08 E-value=1.8e-10 Score=107.45 Aligned_cols=92 Identities=20% Similarity=0.305 Sum_probs=74.9
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
.+.+...+ ...++.+|||+|||+|.++..+++.. +.++|+++|+++.+++.|++++...++. ++++++++|+.
T Consensus 43 ~~~l~~~~--~~~~~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~ 115 (233)
T 2gpy_A 43 MESLLHLL--KMAAPARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALGLE----SRIELLFGDAL 115 (233)
T ss_dssp HHHHHHHH--HHHCCSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTTCT----TTEEEECSCGG
T ss_pred HHHHHHHH--hccCCCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEECCHH
Confidence 44455555 55678899999999999999999986 3489999999999999999999888773 57999999987
Q ss_pred CC-CCC--CCcccceeccCccc
Q psy7834 123 KG-YLD--EAPYDIIHVGGSIE 141 (492)
Q Consensus 123 ~~-~~~--~~~~D~i~~~~~~~ 141 (492)
+. +.. +++||+|++....+
T Consensus 116 ~~~~~~~~~~~fD~I~~~~~~~ 137 (233)
T 2gpy_A 116 QLGEKLELYPLFDVLFIDAAKG 137 (233)
T ss_dssp GSHHHHTTSCCEEEEEEEGGGS
T ss_pred HHHHhcccCCCccEEEECCCHH
Confidence 74 322 47899999876543
No 377
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.08 E-value=4.6e-10 Score=104.25 Aligned_cols=81 Identities=21% Similarity=0.283 Sum_probs=68.5
Q ss_pred hcCCCCeEEEEcCc-CcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC-CCCCCc
Q psy7834 53 ELTEGKKVLDIGSG-NGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG-YLDEAP 130 (492)
Q Consensus 53 ~~~~~~~vLDiG~G-~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~ 130 (492)
.+.++.+|||+||| +|.++..+++..+ .+|+|+|+|+.|++.|++++..+++ +++++++|+... ++++++
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~------~v~~~~~d~~~~~~~~~~~ 123 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFFN--CKVTATEVDEEFFEYARRNIERNNS------NVRLVKSNGGIIKGVVEGT 123 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHTTC------CCEEEECSSCSSTTTCCSC
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHhCC------CcEEEeCCchhhhhcccCc
Confidence 46788999999999 9999999999852 7999999999999999999988763 789999997543 344689
Q ss_pred ccceeccCccc
Q psy7834 131 YDIIHVGGSIE 141 (492)
Q Consensus 131 ~D~i~~~~~~~ 141 (492)
||+|+++....
T Consensus 124 fD~I~~npp~~ 134 (230)
T 3evz_A 124 FDVIFSAPPYY 134 (230)
T ss_dssp EEEEEECCCCC
T ss_pred eeEEEECCCCc
Confidence 99999875543
No 378
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.08 E-value=4.3e-10 Score=110.47 Aligned_cols=80 Identities=25% Similarity=0.273 Sum_probs=69.8
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
...++++|||+|||+|.++..+++.. . .+|+|+|++ +|++.|+++++.+++. ++++++++|+.+++++.++||
T Consensus 35 ~~~~~~~VLDiGcGtG~ls~~la~~g-~-~~v~~vD~s-~~~~~a~~~~~~~~~~----~~i~~~~~d~~~~~~~~~~~D 107 (328)
T 1g6q_1 35 DLFKDKIVLDVGCGTGILSMFAAKHG-A-KHVIGVDMS-SIIEMAKELVELNGFS----DKITLLRGKLEDVHLPFPKVD 107 (328)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTC-C-SEEEEEESS-THHHHHHHHHHHTTCT----TTEEEEESCTTTSCCSSSCEE
T ss_pred hhcCCCEEEEecCccHHHHHHHHHCC-C-CEEEEEChH-HHHHHHHHHHHHcCCC----CCEEEEECchhhccCCCCccc
Confidence 45678999999999999999999873 2 599999999 6999999999888874 679999999999887778999
Q ss_pred ceeccCc
Q psy7834 133 IIHVGGS 139 (492)
Q Consensus 133 ~i~~~~~ 139 (492)
+|++...
T Consensus 108 ~Ivs~~~ 114 (328)
T 1g6q_1 108 IIISEWM 114 (328)
T ss_dssp EEEECCC
T ss_pred EEEEeCc
Confidence 9998643
No 379
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.08 E-value=4.7e-10 Score=106.46 Aligned_cols=102 Identities=20% Similarity=0.119 Sum_probs=81.2
Q ss_pred cChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE
Q psy7834 193 SSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV 272 (492)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~ 272 (492)
..+.+.+.+++.+. +.++ +|||||||+|.+|..++++. ++|+|+|+|++|++.+++++.. .+++++
T Consensus 31 ~d~~i~~~Iv~~~~--~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~--------~~v~vi 96 (271)
T 3fut_A 31 VSEAHLRRIVEAAR--PFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSG--------LPVRLV 96 (271)
T ss_dssp CCHHHHHHHHHHHC--CCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTT--------SSEEEE
T ss_pred CCHHHHHHHHHhcC--CCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCC--------CCEEEE
Confidence 45677788888875 6778 99999999999999999875 4799999999999999988752 479999
Q ss_pred EccCCCCCcCC-CCccEEEecCcchhhHHHHHHHhcc
Q psy7834 273 DGDGREGHAAE-GPYDVIYVGGAVHHYPFKLMDQLKP 308 (492)
Q Consensus 273 ~~d~~~~~~~~-~~fD~i~s~~~~~~~~~~~~~~L~p 308 (492)
++|+.....++ ..+|.|++|...+--..-+.++|..
T Consensus 97 ~~D~l~~~~~~~~~~~~iv~NlPy~iss~il~~ll~~ 133 (271)
T 3fut_A 97 FQDALLYPWEEVPQGSLLVANLPYHIATPLVTRLLKT 133 (271)
T ss_dssp ESCGGGSCGGGSCTTEEEEEEECSSCCHHHHHHHHHH
T ss_pred ECChhhCChhhccCccEEEecCcccccHHHHHHHhcC
Confidence 99997765443 3699999998765544555555543
No 380
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.08 E-value=2e-10 Score=113.88 Aligned_cols=77 Identities=26% Similarity=0.305 Sum_probs=67.5
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
...+|++|||||||||.++...|+.+. .+|+|||.|+ |++.|+++++.++++ ++|+++++|++++.++ ++||
T Consensus 80 ~~~~~k~VLDvG~GtGiLs~~Aa~aGA--~~V~ave~s~-~~~~a~~~~~~n~~~----~~i~~i~~~~~~~~lp-e~~D 151 (376)
T 4hc4_A 80 AALRGKTVLDVGAGTGILSIFCAQAGA--RRVYAVEASA-IWQQAREVVRFNGLE----DRVHVLPGPVETVELP-EQVD 151 (376)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTTC--SEEEEEECST-THHHHHHHHHHTTCT----TTEEEEESCTTTCCCS-SCEE
T ss_pred HhcCCCEEEEeCCCccHHHHHHHHhCC--CEEEEEeChH-HHHHHHHHHHHcCCC----ceEEEEeeeeeeecCC-cccc
Confidence 345799999999999999998888753 6899999985 899999999999985 7899999999998765 7899
Q ss_pred ceecc
Q psy7834 133 IIHVG 137 (492)
Q Consensus 133 ~i~~~ 137 (492)
+|++.
T Consensus 152 vivsE 156 (376)
T 4hc4_A 152 AIVSE 156 (376)
T ss_dssp EEECC
T ss_pred EEEee
Confidence 99984
No 381
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.08 E-value=1e-10 Score=104.79 Aligned_cols=94 Identities=14% Similarity=0.155 Sum_probs=73.7
Q ss_pred hhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEec
Q psy7834 40 KFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLG 119 (492)
Q Consensus 40 ~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 119 (492)
..+...+++++. ...++.+|||+|||+|.++..+++.. ..+|+|+|+++.|++.|++++..+++. ++++++++
T Consensus 29 ~~~~~~~~~~l~-~~~~~~~vLD~GcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~~~~~~~ 101 (187)
T 2fhp_A 29 DKVKESIFNMIG-PYFDGGMALDLYSGSGGLAIEAVSRG--MDKSICIEKNFAALKVIKENIAITKEP----EKFEVRKM 101 (187)
T ss_dssp HHHHHHHHHHHC-SCCSSCEEEETTCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHTCG----GGEEEEES
T ss_pred HHHHHHHHHHHH-hhcCCCCEEEeCCccCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHhCCC----cceEEEEC
Confidence 334555666552 23478899999999999999988853 269999999999999999999887763 58999999
Q ss_pred CCCCCCC----CCCcccceeccCcc
Q psy7834 120 DGRKGYL----DEAPYDIIHVGGSI 140 (492)
Q Consensus 120 d~~~~~~----~~~~~D~i~~~~~~ 140 (492)
|+.+... ..++||+|+++...
T Consensus 102 d~~~~~~~~~~~~~~fD~i~~~~~~ 126 (187)
T 2fhp_A 102 DANRALEQFYEEKLQFDLVLLDPPY 126 (187)
T ss_dssp CHHHHHHHHHHTTCCEEEEEECCCG
T ss_pred cHHHHHHHHHhcCCCCCEEEECCCC
Confidence 9877421 26789999987653
No 382
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.08 E-value=2.9e-10 Score=104.77 Aligned_cols=84 Identities=14% Similarity=0.188 Sum_probs=67.4
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHH----HHhhhcCCCCccccCceEEEec
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRA----THNVISGNPEFVKDGRIKFVLG 119 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a----~~~~~~~~~~~~~~~~v~~~~~ 119 (492)
...++.+ .+.++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.+ +++....++ ++++++++
T Consensus 17 ~~~~~~l--~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-----~~v~~~~~ 88 (218)
T 3mq2_A 17 DAEFEQL--RSQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGL-----PNLLYLWA 88 (218)
T ss_dssp HHHHHHH--HTTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-----TTEEEEEC
T ss_pred HHHHHHh--hccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-----CceEEEec
Confidence 4455666 67788999999999999999999985 458999999999988863 334444555 68999999
Q ss_pred CCCCCCCCCCcccceec
Q psy7834 120 DGRKGYLDEAPYDIIHV 136 (492)
Q Consensus 120 d~~~~~~~~~~~D~i~~ 136 (492)
|+.++++.+++ |.|+.
T Consensus 89 d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 89 TAERLPPLSGV-GELHV 104 (218)
T ss_dssp CSTTCCSCCCE-EEEEE
T ss_pred chhhCCCCCCC-CEEEE
Confidence 99998887666 77764
No 383
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.08 E-value=3.9e-10 Score=107.75 Aligned_cols=78 Identities=27% Similarity=0.264 Sum_probs=69.2
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
.+.++++|||+|||+|.++..+++.. +.++|+|+|+++.+++.|+++++.+++ .++.++++|+.+.+ ..++||
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~-~~~~V~~vD~s~~av~~a~~n~~~n~l-----~~~~~~~~d~~~~~-~~~~~D 188 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYS-KPKLVYAIEKNPTAYHYLCENIKLNKL-----NNVIPILADNRDVE-LKDVAD 188 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHT-CCSEEEEEECCHHHHHHHHHHHHHTTC-----SSEEEEESCGGGCC-CTTCEE
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCC-----CCEEEEECChHHcC-ccCCce
Confidence 56788999999999999999999986 236999999999999999999999887 68999999998873 357899
Q ss_pred ceecc
Q psy7834 133 IIHVG 137 (492)
Q Consensus 133 ~i~~~ 137 (492)
+|+++
T Consensus 189 ~Vi~d 193 (272)
T 3a27_A 189 RVIMG 193 (272)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99874
No 384
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.08 E-value=1.8e-10 Score=107.39 Aligned_cols=81 Identities=19% Similarity=0.073 Sum_probs=68.2
Q ss_pred CCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccccee
Q psy7834 56 EGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDIIH 135 (492)
Q Consensus 56 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~ 135 (492)
++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++....+.. .+++++++|+.+.+ +.++||+|+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~-~~~~fD~v~ 137 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPE---RFVVGLDISESALAKANETYGSSPKA----EYFSFVKEDVFTWR-PTELFDLIF 137 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTT---EEEEEECSCHHHHHHHHHHHTTSGGG----GGEEEECCCTTTCC-CSSCEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHhhccCCC----cceEEEECchhcCC-CCCCeeEEE
Confidence 44599999999999999998754 79999999999999999998765432 57999999999876 456999999
Q ss_pred ccCcccccc
Q psy7834 136 VGGSIEDIP 144 (492)
Q Consensus 136 ~~~~~~~l~ 144 (492)
+..+++.+.
T Consensus 138 ~~~~l~~~~ 146 (235)
T 3lcc_A 138 DYVFFCAIE 146 (235)
T ss_dssp EESSTTTSC
T ss_pred EChhhhcCC
Confidence 987776543
No 385
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.08 E-value=3e-10 Score=108.78 Aligned_cols=84 Identities=17% Similarity=0.370 Sum_probs=69.9
Q ss_pred HHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcC-CCCccccCceEEEecCCCC
Q psy7834 45 MVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISG-NPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 45 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~-~~~~~~~~~v~~~~~d~~~ 123 (492)
.+++.+ .+.++.+|||+|||+|.++..+++..++..+|+++|+++.+++.|+++.+.+ +. .+++++++|+.+
T Consensus 101 ~~~~~~--~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-----~~v~~~~~d~~~ 173 (275)
T 1yb2_A 101 YIIMRC--GLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-----GNVRTSRSDIAD 173 (275)
T ss_dssp -----C--CCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-----TTEEEECSCTTT
T ss_pred HHHHHc--CCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-----CcEEEEECchhc
Confidence 445555 6778899999999999999999998545589999999999999999999887 75 689999999987
Q ss_pred CCCCCCcccceec
Q psy7834 124 GYLDEAPYDIIHV 136 (492)
Q Consensus 124 ~~~~~~~~D~i~~ 136 (492)
++++++||+|++
T Consensus 174 -~~~~~~fD~Vi~ 185 (275)
T 1yb2_A 174 -FISDQMYDAVIA 185 (275)
T ss_dssp -CCCSCCEEEEEE
T ss_pred -cCcCCCccEEEE
Confidence 556678999987
No 386
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.07 E-value=2.9e-10 Score=104.12 Aligned_cols=86 Identities=19% Similarity=0.199 Sum_probs=71.5
Q ss_pred HHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC
Q psy7834 46 VLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY 125 (492)
Q Consensus 46 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 125 (492)
+.+.+...+.++.+|||+|||+|.++..+++.. . .+|+++|+|+.+++.|+++... . .+++++++|+.+++
T Consensus 32 ~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~-~-~~v~~~D~s~~~~~~a~~~~~~--~-----~~i~~~~~d~~~~~ 102 (215)
T 2pxx_A 32 FRALLEPELRPEDRILVLGCGNSALSYELFLGG-F-PNVTSVDYSSVVVAAMQACYAH--V-----PQLRWETMDVRKLD 102 (215)
T ss_dssp HHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTT-C-CCEEEEESCHHHHHHHHHHTTT--C-----TTCEEEECCTTSCC
T ss_pred HHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcC-C-CcEEEEeCCHHHHHHHHHhccc--C-----CCcEEEEcchhcCC
Confidence 444443345788999999999999999999984 3 3899999999999999998754 2 57999999999988
Q ss_pred CCCCcccceeccCcc
Q psy7834 126 LDEAPYDIIHVGGSI 140 (492)
Q Consensus 126 ~~~~~~D~i~~~~~~ 140 (492)
+++++||+|+++.++
T Consensus 103 ~~~~~fD~v~~~~~~ 117 (215)
T 2pxx_A 103 FPSASFDVVLEKGTL 117 (215)
T ss_dssp SCSSCEEEEEEESHH
T ss_pred CCCCcccEEEECcch
Confidence 878899999986554
No 387
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.07 E-value=2.9e-10 Score=106.13 Aligned_cols=79 Identities=14% Similarity=0.096 Sum_probs=65.1
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhc------CCCCccccCceEEEecCCCC-CC-
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVIS------GNPEFVKDGRIKFVLGDGRK-GY- 125 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~------~~~~~~~~~~v~~~~~d~~~-~~- 125 (492)
..++.+|||||||+|.++..||+.. +..+|+|||+|+.|++.|++++.. .++ .|++++++|+.+ ++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-----~nv~~~~~d~~~~l~~ 117 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-----QNIACLRSNAMKHLPN 117 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-----TTEEEEECCTTTCHHH
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-----CeEEEEECcHHHhhhh
Confidence 4466799999999999999999985 558999999999999999987643 344 689999999987 54
Q ss_pred -CCCCcccceeccC
Q psy7834 126 -LDEAPYDIIHVGG 138 (492)
Q Consensus 126 -~~~~~~D~i~~~~ 138 (492)
+++++||.|++..
T Consensus 118 ~~~~~~~D~v~~~~ 131 (235)
T 3ckk_A 118 FFYKGQLTKMFFLF 131 (235)
T ss_dssp HCCTTCEEEEEEES
T ss_pred hCCCcCeeEEEEeC
Confidence 5678999998743
No 388
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.07 E-value=2.8e-10 Score=113.57 Aligned_cols=92 Identities=18% Similarity=0.282 Sum_probs=74.2
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
+.+++.+ ...++.+|||+|||+|.++..+++.. +..+|+++|+|+.|++.|+++.+.+++. ...+++|+++|+.+
T Consensus 212 ~~ll~~l--~~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~--~~~~v~~~~~D~~~ 286 (375)
T 4dcm_A 212 RFFMQHL--PENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPE--ALDRCEFMINNALS 286 (375)
T ss_dssp HHHHHTC--CCSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGG--GGGGEEEEECSTTT
T ss_pred HHHHHhC--cccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCC--cCceEEEEechhhc
Confidence 3556666 55566899999999999999999985 5589999999999999999999887752 00258999999987
Q ss_pred CCCCCCcccceeccCccc
Q psy7834 124 GYLDEAPYDIIHVGGSIE 141 (492)
Q Consensus 124 ~~~~~~~~D~i~~~~~~~ 141 (492)
++++++||+|+++..++
T Consensus 287 -~~~~~~fD~Ii~nppfh 303 (375)
T 4dcm_A 287 -GVEPFRFNAVLCNPPFH 303 (375)
T ss_dssp -TCCTTCEEEEEECCCC-
T ss_pred -cCCCCCeeEEEECCCcc
Confidence 45668999999976553
No 389
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.07 E-value=2.1e-10 Score=110.84 Aligned_cols=88 Identities=24% Similarity=0.330 Sum_probs=67.1
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCc------------------------
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEF------------------------ 108 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~------------------------ 108 (492)
...++++|||||||+|.++..+++..+ ..+|+|+|+|+.|++.|++++...+..-
T Consensus 43 ~~~~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (292)
T 3g07_A 43 EWFRGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVR 121 (292)
T ss_dssp GGTTTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC-------------------------------
T ss_pred hhcCCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccc
Confidence 344789999999999999999999963 3799999999999999999876543200
Q ss_pred -----------------------------cccCceEEEecCCCCCC-----CCCCcccceeccCccc
Q psy7834 109 -----------------------------VKDGRIKFVLGDGRKGY-----LDEAPYDIIHVGGSIE 141 (492)
Q Consensus 109 -----------------------------~~~~~v~~~~~d~~~~~-----~~~~~~D~i~~~~~~~ 141 (492)
-...+++|+++|+.... +..++||+|++..+++
T Consensus 122 ~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~ 188 (292)
T 3g07_A 122 KRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTK 188 (292)
T ss_dssp --------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHH
T ss_pred ccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHH
Confidence 00047999999987654 4578999999977663
No 390
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.07 E-value=1.1e-10 Score=108.06 Aligned_cols=84 Identities=21% Similarity=0.279 Sum_probs=69.8
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCC--CC--
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYL--DE-- 128 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~-- 128 (492)
...++.+|||+|||+|..+..+++..++.++|+++|+++.+++.|++++++.++. ++++++++|+.+... ..
T Consensus 61 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~ 136 (225)
T 3tr6_A 61 KLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLS----DKIGLRLSPAKDTLAELIHAG 136 (225)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCHHHHHHHHHTTT
T ss_pred HhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCC----CceEEEeCCHHHHHHHhhhcc
Confidence 4457889999999999999999998644589999999999999999999988873 579999999865421 11
Q ss_pred --CcccceeccCcc
Q psy7834 129 --APYDIIHVGGSI 140 (492)
Q Consensus 129 --~~~D~i~~~~~~ 140 (492)
++||+|++....
T Consensus 137 ~~~~fD~v~~~~~~ 150 (225)
T 3tr6_A 137 QAWQYDLIYIDADK 150 (225)
T ss_dssp CTTCEEEEEECSCG
T ss_pred CCCCccEEEECCCH
Confidence 789999976553
No 391
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.07 E-value=3e-10 Score=105.72 Aligned_cols=74 Identities=23% Similarity=0.324 Sum_probs=64.6
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC----CCCCC
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK----GYLDE 128 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~----~~~~~ 128 (492)
.+.++.+|||+|||+|.++..+++..+ .++|+|+|+|+.|++.|+++++.. .++.++++|+.. .++.
T Consensus 71 ~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~-------~~v~~~~~d~~~~~~~~~~~- 141 (230)
T 1fbn_A 71 PIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER-------ENIIPILGDANKPQEYANIV- 141 (230)
T ss_dssp CCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC-------TTEEEEECCTTCGGGGTTTS-
T ss_pred CCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC-------CCeEEEECCCCCcccccccC-
Confidence 456789999999999999999999974 579999999999999999987653 589999999987 6555
Q ss_pred Cccccee
Q psy7834 129 APYDIIH 135 (492)
Q Consensus 129 ~~~D~i~ 135 (492)
++||+|+
T Consensus 142 ~~~D~v~ 148 (230)
T 1fbn_A 142 EKVDVIY 148 (230)
T ss_dssp CCEEEEE
T ss_pred ccEEEEE
Confidence 7899997
No 392
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.07 E-value=1.3e-10 Score=106.73 Aligned_cols=91 Identities=16% Similarity=0.099 Sum_probs=71.6
Q ss_pred HHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC
Q psy7834 200 QALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG 279 (492)
Q Consensus 200 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 279 (492)
.+++.+.. ..++.+|||+|||+|.++..++ .+|+|+|+|+. +++++++|+.+.
T Consensus 57 ~~~~~l~~-~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~--------------------~~~~~~~d~~~~ 109 (215)
T 2zfu_A 57 RIARDLRQ-RPASLVVADFGCGDCRLASSIR------NPVHCFDLASL--------------------DPRVTVCDMAQV 109 (215)
T ss_dssp HHHHHHHT-SCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS--------------------STTEEESCTTSC
T ss_pred HHHHHHhc-cCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC--------------------CceEEEeccccC
Confidence 45555542 4677899999999999988773 46999999987 146788998876
Q ss_pred CcCCCCccEEEecCcchhh-----HHHHHHHhccCCeEEEEeC
Q psy7834 280 HAAEGPYDVIYVGGAVHHY-----PFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 280 ~~~~~~fD~i~s~~~~~~~-----~~~~~~~L~pgG~l~~~~~ 317 (492)
+.++++||+|++..++|+- ..++.++|+|||++++...
T Consensus 110 ~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 110 PLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp SCCTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEc
Confidence 6667889999999888642 2488999999999999753
No 393
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.06 E-value=1.2e-10 Score=109.09 Aligned_cols=93 Identities=16% Similarity=0.241 Sum_probs=73.8
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
.+.+...+ ...++.+|||+|||+|..+..+++..++.++|+++|+++.+++.|++++.+.++. ++++++++|+.
T Consensus 49 ~~~l~~l~--~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~----~~v~~~~~d~~ 122 (239)
T 2hnk_A 49 GQFLNILT--KISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLE----NKIFLKLGSAL 122 (239)
T ss_dssp HHHHHHHH--HHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG----GGEEEEESCHH
T ss_pred HHHHHHHH--HhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CCEEEEECCHH
Confidence 34444444 4567889999999999999999999744589999999999999999999888773 46999999986
Q ss_pred CC-C--------------CC-C-CcccceeccCccc
Q psy7834 123 KG-Y--------------LD-E-APYDIIHVGGSIE 141 (492)
Q Consensus 123 ~~-~--------------~~-~-~~~D~i~~~~~~~ 141 (492)
+. + ++ . ++||+|++.....
T Consensus 123 ~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~ 158 (239)
T 2hnk_A 123 ETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKE 158 (239)
T ss_dssp HHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGG
T ss_pred HHHHHHHhhcccccccccccCCCCCcCEEEEeCCHH
Confidence 53 1 11 2 7899999876544
No 394
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.06 E-value=2.5e-10 Score=102.45 Aligned_cols=89 Identities=25% Similarity=0.320 Sum_probs=74.6
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
...+++.+ .+.++.+|||+|||+|.++..+++.. .+|+++|+++.+++.|+++...+++. .+++++++|+.
T Consensus 22 ~~~~~~~~--~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~----~~~~~~~~d~~ 92 (192)
T 1l3i_A 22 RCLIMCLA--EPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLG----DNVTLMEGDAP 92 (192)
T ss_dssp HHHHHHHH--CCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCC----TTEEEEESCHH
T ss_pred HHHHHHhc--CCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCC----cceEEEecCHH
Confidence 55666666 67888999999999999999999986 79999999999999999999887763 58999999987
Q ss_pred CCCCCC-CcccceeccCccc
Q psy7834 123 KGYLDE-APYDIIHVGGSIE 141 (492)
Q Consensus 123 ~~~~~~-~~~D~i~~~~~~~ 141 (492)
+ +++. ++||+|++....+
T Consensus 93 ~-~~~~~~~~D~v~~~~~~~ 111 (192)
T 1l3i_A 93 E-ALCKIPDIDIAVVGGSGG 111 (192)
T ss_dssp H-HHTTSCCEEEEEESCCTT
T ss_pred H-hcccCCCCCEEEECCchH
Confidence 6 2332 5899999876653
No 395
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.06 E-value=1.5e-10 Score=111.75 Aligned_cols=99 Identities=15% Similarity=0.093 Sum_probs=76.5
Q ss_pred hHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecC
Q psy7834 41 FQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGD 120 (492)
Q Consensus 41 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 120 (492)
.+...+.+.+ ...++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++....+.. ....++.+.++|
T Consensus 44 ~~~~~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~~~~~~~~~d 117 (293)
T 3thr_A 44 EYKAWLLGLL--RQHGCHRVLDVACGTGVDSIMLVEEG---FSVTSVDASDKMLKYALKERWNRRKE-PAFDKWVIEEAN 117 (293)
T ss_dssp HHHHHHHHHH--HHTTCCEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTTS-HHHHTCEEEECC
T ss_pred HHHHHHHHHh--cccCCCEEEEecCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHhhhhcccc-cccceeeEeecC
Confidence 3445566666 55678899999999999999999984 69999999999999999876443221 001468899999
Q ss_pred CCCCC---CCCCcccceecc-Cccccccc
Q psy7834 121 GRKGY---LDEAPYDIIHVG-GSIEDIPE 145 (492)
Q Consensus 121 ~~~~~---~~~~~~D~i~~~-~~~~~l~~ 145 (492)
+.+++ +++++||+|++. .+++++.+
T Consensus 118 ~~~~~~~~~~~~~fD~V~~~g~~l~~~~~ 146 (293)
T 3thr_A 118 WLTLDKDVPAGDGFDAVICLGNSFAHLPD 146 (293)
T ss_dssp GGGHHHHSCCTTCEEEEEECTTCGGGSCC
T ss_pred hhhCccccccCCCeEEEEEcChHHhhcCc
Confidence 98877 678899999997 66655443
No 396
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.06 E-value=2.9e-09 Score=106.30 Aligned_cols=117 Identities=11% Similarity=0.029 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCC-------------------------------------CCe
Q psy7834 196 KVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGP-------------------------------------TGK 238 (492)
Q Consensus 196 ~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-------------------------------------~~~ 238 (492)
.+.+.++.+.. ..++..+||.+||+|.+++.+|..... ..+
T Consensus 181 ~LAaall~l~~--~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 258 (384)
T 3ldg_A 181 NMAAAIILLSN--WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLD 258 (384)
T ss_dssp HHHHHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred HHHHHHHHHhC--CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCce
Confidence 34444444332 567889999999999999998876521 146
Q ss_pred EEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEEEecCcch----------hhHHHHHHHhcc
Q psy7834 239 VYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIYVGGAVH----------HYPFKLMDQLKP 308 (492)
Q Consensus 239 v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~s~~~~~----------~~~~~~~~~L~p 308 (492)
|+|+|+|+.|++.|++|+..++ ...+++++++|+.+...+ .+||+|++|..+. .+-.++.+.||+
T Consensus 259 v~GvDid~~al~~Ar~Na~~~g----l~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~ 333 (384)
T 3ldg_A 259 ISGFDFDGRMVEIARKNAREVG----LEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAP 333 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTT
T ss_pred EEEEECCHHHHHHHHHHHHHcC----CCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999875 234699999999875543 5899999996642 112255667766
Q ss_pred --CCeEEEEeCCC
Q psy7834 309 --GGVMWFTIGNA 319 (492)
Q Consensus 309 --gG~l~~~~~~~ 319 (492)
||.+++.++..
T Consensus 334 ~~g~~~~iit~~~ 346 (384)
T 3ldg_A 334 LKTWSQFILTNDT 346 (384)
T ss_dssp CTTSEEEEEESCT
T ss_pred CCCcEEEEEECCH
Confidence 99999877644
No 397
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.06 E-value=1.4e-10 Score=102.45 Aligned_cols=83 Identities=16% Similarity=0.231 Sum_probs=70.9
Q ss_pred HHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC
Q psy7834 45 MVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG 124 (492)
Q Consensus 45 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 124 (492)
.+++.+ .+.++.+|||+|||+|.++..+++.. .+|+++|+++.+++.|+++. ++++++++| .
T Consensus 8 ~~~~~~--~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~----------~~v~~~~~d---~ 69 (170)
T 3i9f_A 8 EYLPNI--FEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKF----------DSVITLSDP---K 69 (170)
T ss_dssp TTHHHH--HSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHC----------TTSEEESSG---G
T ss_pred HHHHhc--CcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhC----------CCcEEEeCC---C
Confidence 445555 67788999999999999999999986 59999999999999999882 689999999 5
Q ss_pred CCCCCcccceeccCccccccc
Q psy7834 125 YLDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 125 ~~~~~~~D~i~~~~~~~~l~~ 145 (492)
++++++||+|++...++++.+
T Consensus 70 ~~~~~~~D~v~~~~~l~~~~~ 90 (170)
T 3i9f_A 70 EIPDNSVDFILFANSFHDMDD 90 (170)
T ss_dssp GSCTTCEEEEEEESCSTTCSC
T ss_pred CCCCCceEEEEEccchhcccC
Confidence 567789999999988876643
No 398
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.06 E-value=7.4e-10 Score=101.07 Aligned_cols=87 Identities=22% Similarity=0.166 Sum_probs=69.1
Q ss_pred HHHHHHHHHH-hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCC
Q psy7834 43 QAMVLDDLSE-ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDG 121 (492)
Q Consensus 43 ~~~~~~~l~~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 121 (492)
...+++.+.. ...++.+|||+|||+|.++..+++.. . .+|+|+|+|+.+++.|+++...+++ +++++++|+
T Consensus 35 ~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~-~-~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~d~ 106 (207)
T 1wy7_A 35 ASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLG-A-KEVICVEVDKEAVDVLIENLGEFKG------KFKVFIGDV 106 (207)
T ss_dssp HHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTT-C-SEEEEEESCHHHHHHHHHHTGGGTT------SEEEEESCG
T ss_pred HHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcC-C-CEEEEEECCHHHHHHHHHHHHHcCC------CEEEEECch
Confidence 4444444421 35578899999999999999999873 2 5899999999999999999877653 799999999
Q ss_pred CCCCCCCCcccceeccCcc
Q psy7834 122 RKGYLDEAPYDIIHVGGSI 140 (492)
Q Consensus 122 ~~~~~~~~~~D~i~~~~~~ 140 (492)
.+++ ++||+|+++...
T Consensus 107 ~~~~---~~~D~v~~~~p~ 122 (207)
T 1wy7_A 107 SEFN---SRVDIVIMNPPF 122 (207)
T ss_dssp GGCC---CCCSEEEECCCC
T ss_pred HHcC---CCCCEEEEcCCC
Confidence 8864 489999986543
No 399
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.05 E-value=3.8e-10 Score=105.67 Aligned_cols=91 Identities=15% Similarity=0.167 Sum_probs=73.9
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
.+.+.+.+.....++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++....+ .+++++++|+.
T Consensus 24 ~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~s~~~~~~a~~~~~~~~------~~~~~~~~d~~ 94 (246)
T 1y8c_A 24 SDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKF---KNTWAVDLSQEMLSEAENKFRSQG------LKPRLACQDIS 94 (246)
T ss_dssp HHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGS---SEEEEECSCHHHHHHHHHHHHHTT------CCCEEECCCGG
T ss_pred HHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCC---CcEEEEECCHHHHHHHHHHHhhcC------CCeEEEecccc
Confidence 345555553222377899999999999999999984 799999999999999999987654 27899999999
Q ss_pred CCCCCCCcccceeccC-ccccc
Q psy7834 123 KGYLDEAPYDIIHVGG-SIEDI 143 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~~-~~~~l 143 (492)
+++++ ++||+|++.. +++++
T Consensus 95 ~~~~~-~~fD~v~~~~~~l~~~ 115 (246)
T 1y8c_A 95 NLNIN-RKFDLITCCLDSTNYI 115 (246)
T ss_dssp GCCCS-CCEEEEEECTTGGGGC
T ss_pred cCCcc-CCceEEEEcCcccccc
Confidence 88766 8899999976 66554
No 400
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.05 E-value=1.5e-10 Score=102.13 Aligned_cols=82 Identities=9% Similarity=0.023 Sum_probs=69.7
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccc
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDI 133 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 133 (492)
+.+..+|||+|||+|-++..++... +..+|+|+|+|+.|++.+++++..+|+. .++.+ +|.... .+..+||+
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~-p~a~~~A~Di~~~~leiar~~~~~~g~~----~~v~~--~d~~~~-~~~~~~Dv 118 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNEN-EKIIYHAYDIDRAEIAFLSSIIGKLKTT----IKYRF--LNKESD-VYKGTYDV 118 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSS-CCCEEEEECSCHHHHHHHHHHHHHSCCS----SEEEE--ECCHHH-HTTSEEEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcC-CCCEEEEEeCCHHHHHHHHHHHHhcCCC----ccEEE--eccccc-CCCCCcCh
Confidence 4567899999999999999999885 5579999999999999999999998873 36776 665544 35688999
Q ss_pred eeccCccccc
Q psy7834 134 IHVGGSIEDI 143 (492)
Q Consensus 134 i~~~~~~~~l 143 (492)
|+....+|.+
T Consensus 119 VLa~k~LHlL 128 (200)
T 3fzg_A 119 VFLLKMLPVL 128 (200)
T ss_dssp EEEETCHHHH
T ss_pred hhHhhHHHhh
Confidence 9999999877
No 401
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.05 E-value=2.3e-10 Score=107.10 Aligned_cols=92 Identities=22% Similarity=0.312 Sum_probs=73.9
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
..++..+. ...++++|||+|||+|+.+..+++..++.++|+++|+++++++.|++++++.++. ++++++++|+.+
T Consensus 59 ~~~l~~l~-~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~----~~i~~~~gda~~ 133 (237)
T 3c3y_A 59 GQLMSFVL-KLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVE----HKINFIESDAML 133 (237)
T ss_dssp HHHHHHHH-HHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG----GGEEEEESCHHH
T ss_pred HHHHHHHH-HhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHH
Confidence 34444432 4457789999999999999999998754689999999999999999999988873 579999999876
Q ss_pred CC--C-----CCCcccceeccCcc
Q psy7834 124 GY--L-----DEAPYDIIHVGGSI 140 (492)
Q Consensus 124 ~~--~-----~~~~~D~i~~~~~~ 140 (492)
.. + ..++||+|++....
T Consensus 134 ~l~~l~~~~~~~~~fD~I~~d~~~ 157 (237)
T 3c3y_A 134 ALDNLLQGQESEGSYDFGFVDADK 157 (237)
T ss_dssp HHHHHHHSTTCTTCEEEEEECSCG
T ss_pred HHHHHHhccCCCCCcCEEEECCch
Confidence 42 1 14789999987543
No 402
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.05 E-value=5.6e-10 Score=106.93 Aligned_cols=86 Identities=28% Similarity=0.461 Sum_probs=74.3
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
..+++.+ .+.++.+|||+|||+|.++..+++..++.++|+++|+++.+++.|+++.+..++. ++++++++|+.+
T Consensus 102 ~~i~~~~--~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~ 175 (277)
T 1o54_A 102 SFIAMML--DVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLI----ERVTIKVRDISE 175 (277)
T ss_dssp HHHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCG----GGEEEECCCGGG
T ss_pred HHHHHHh--CCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC----CCEEEEECCHHH
Confidence 4556666 7788999999999999999999998656689999999999999999999887763 589999999987
Q ss_pred CCCCCCcccceec
Q psy7834 124 GYLDEAPYDIIHV 136 (492)
Q Consensus 124 ~~~~~~~~D~i~~ 136 (492)
. +++++||+|++
T Consensus 176 ~-~~~~~~D~V~~ 187 (277)
T 1o54_A 176 G-FDEKDVDALFL 187 (277)
T ss_dssp C-CSCCSEEEEEE
T ss_pred c-ccCCccCEEEE
Confidence 6 55678999987
No 403
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.04 E-value=5.6e-10 Score=111.57 Aligned_cols=78 Identities=26% Similarity=0.365 Sum_probs=69.2
Q ss_pred CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccce
Q psy7834 55 TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDII 134 (492)
Q Consensus 55 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i 134 (492)
.++.+|||+|||+|.++..+++.. .+|+++|+|+.|++.|++++..+++ +++++++|+.+.+.++++||+|
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g---~~V~gvDis~~al~~A~~n~~~~~~------~v~~~~~D~~~~~~~~~~fD~I 302 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMG---AEVVGVEDDLASVLSLQKGLEANAL------KAQALHSDVDEALTEEARFDII 302 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTT---CEEEEEESBHHHHHHHHHHHHHTTC------CCEEEECSTTTTSCTTCCEEEE
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCC------CeEEEEcchhhccccCCCeEEE
Confidence 367899999999999999999984 7999999999999999999988775 4899999999887767899999
Q ss_pred eccCccc
Q psy7834 135 HVGGSIE 141 (492)
Q Consensus 135 ~~~~~~~ 141 (492)
+++..++
T Consensus 303 i~npp~~ 309 (381)
T 3dmg_A 303 VTNPPFH 309 (381)
T ss_dssp EECCCCC
T ss_pred EECCchh
Confidence 9976654
No 404
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.04 E-value=2.4e-10 Score=106.01 Aligned_cols=86 Identities=17% Similarity=0.181 Sum_probs=65.7
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCC-HHHHHHH---HHhhhcCCCCccccCceEEEec
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHI-PQLVQRA---THNVISGNPEFVKDGRIKFVLG 119 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~-~~~~~~a---~~~~~~~~~~~~~~~~v~~~~~ 119 (492)
..+.+.. ..++.+|||||||+|.++..+++.. +..+|+|||+| +.|++.| +++..+.++ .++.++++
T Consensus 15 ~~~~~~~---~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~-----~~v~~~~~ 85 (225)
T 3p2e_A 15 DELTEII---GQFDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGL-----SNVVFVIA 85 (225)
T ss_dssp HHHHHHH---TTCSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCC-----SSEEEECC
T ss_pred HHHHHHh---CCCCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC-----CCeEEEEc
Confidence 4444443 4678899999999999999999764 55899999999 7777776 888878777 68999999
Q ss_pred CCCCCCCC-CCcccceeccC
Q psy7834 120 DGRKGYLD-EAPYDIIHVGG 138 (492)
Q Consensus 120 d~~~~~~~-~~~~D~i~~~~ 138 (492)
|+++++.. .+.+|.|+++.
T Consensus 86 d~~~l~~~~~d~v~~i~~~~ 105 (225)
T 3p2e_A 86 AAESLPFELKNIADSISILF 105 (225)
T ss_dssp BTTBCCGGGTTCEEEEEEES
T ss_pred CHHHhhhhccCeEEEEEEeC
Confidence 99988532 24455555443
No 405
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.04 E-value=1.9e-09 Score=107.88 Aligned_cols=106 Identities=16% Similarity=0.130 Sum_probs=82.2
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhC-------------------------------------CCCeEEEEeCCHHHHHH
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVG-------------------------------------PTGKVYAVEHIEDLVAQ 251 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~-------------------------------------~~~~v~giD~s~~~l~~ 251 (492)
..++.+|||.+||+|.+++.+|.... +..+|+|+|+|+.|++.
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 46788999999999999999988752 11579999999999999
Q ss_pred HHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccEEEecCcch-hh---------HHHHHHHhcc--CCeEEEEeCCC
Q psy7834 252 ANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIYVGGAVH-HY---------PFKLMDQLKP--GGVMWFTIGNA 319 (492)
Q Consensus 252 a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~s~~~~~-~~---------~~~~~~~L~p--gG~l~~~~~~~ 319 (492)
|++|+..++ ...+++|.++|+.+... .++||+|++|..+. .+ -.++.+.||+ ||.+++.++..
T Consensus 273 Ar~Na~~~g----l~~~i~~~~~D~~~l~~-~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 347 (385)
T 3ldu_A 273 ARENAEIAG----VDEYIEFNVGDATQFKS-EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSYE 347 (385)
T ss_dssp HHHHHHHHT----CGGGEEEEECCGGGCCC-SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESCT
T ss_pred HHHHHHHcC----CCCceEEEECChhhcCc-CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECCH
Confidence 999998875 22479999999987544 45899999997652 11 1245566766 99988876643
No 406
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.04 E-value=4.5e-10 Score=112.42 Aligned_cols=79 Identities=25% Similarity=0.285 Sum_probs=69.7
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
...++++|||||||+|.++..+++.. . .+|+|+|+| +|++.|+++++.+++. ++++++++|+++++++ ++||
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~g-~-~~V~gvD~s-~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~-~~~D 131 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQAG-A-RKVYAVEAT-KMADHARALVKANNLD----HIVEVIEGSVEDISLP-EKVD 131 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHTT-C-SEEEEEESS-TTHHHHHHHHHHTTCT----TTEEEEESCGGGCCCS-SCEE
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhcC-C-CEEEEEccH-HHHHHHHHHHHHcCCC----CeEEEEECchhhcCcC-Ccce
Confidence 45688999999999999999999984 2 599999999 9999999999998874 6799999999998776 8999
Q ss_pred ceeccCc
Q psy7834 133 IIHVGGS 139 (492)
Q Consensus 133 ~i~~~~~ 139 (492)
+|++...
T Consensus 132 ~Iv~~~~ 138 (376)
T 3r0q_C 132 VIISEWM 138 (376)
T ss_dssp EEEECCC
T ss_pred EEEEcCh
Confidence 9999543
No 407
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.04 E-value=8.5e-10 Score=109.25 Aligned_cols=88 Identities=26% Similarity=0.246 Sum_probs=72.9
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
+.+++.+ ...++++|||||||+|.++..+++... .+|+|+|+|+ |++.|+++++.+++. ++++++++|+++
T Consensus 40 ~~i~~~l--~~~~~~~VLDiGcGtG~ls~~la~~g~--~~V~~vD~s~-~~~~a~~~~~~~~l~----~~v~~~~~d~~~ 110 (348)
T 2y1w_A 40 RAILQNH--TDFKDKIVLDVGCGSGILSFFAAQAGA--RKIYAVEAST-MAQHAEVLVKSNNLT----DRIVVIPGKVEE 110 (348)
T ss_dssp HHHHHTG--GGTTTCEEEEETCTTSHHHHHHHHTTC--SEEEEEECST-HHHHHHHHHHHTTCT----TTEEEEESCTTT
T ss_pred HHHHhcc--ccCCcCEEEEcCCCccHHHHHHHhCCC--CEEEEECCHH-HHHHHHHHHHHcCCC----CcEEEEEcchhh
Confidence 3444544 566889999999999999999998732 6999999996 999999999888874 689999999998
Q ss_pred CCCCCCcccceeccCccc
Q psy7834 124 GYLDEAPYDIIHVGGSIE 141 (492)
Q Consensus 124 ~~~~~~~~D~i~~~~~~~ 141 (492)
.+++ ++||+|++.....
T Consensus 111 ~~~~-~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 111 VSLP-EQVDIIISEPMGY 127 (348)
T ss_dssp CCCS-SCEEEEEECCCBT
T ss_pred CCCC-CceeEEEEeCchh
Confidence 7654 6899999976544
No 408
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.04 E-value=1.2e-09 Score=101.89 Aligned_cols=85 Identities=18% Similarity=0.230 Sum_probs=68.7
Q ss_pred HHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC
Q psy7834 45 MVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG 124 (492)
Q Consensus 45 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 124 (492)
.+.+.+.....++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++. .+++++++|+.+.
T Consensus 29 ~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~~~ 95 (239)
T 3bxo_A 29 DIADLVRSRTPEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL----------PDATLHQGDMRDF 95 (239)
T ss_dssp HHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC----------TTCEEEECCTTTC
T ss_pred HHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC----------CCCEEEECCHHHc
Confidence 3444443334678899999999999999999997 59999999999999999875 4689999999988
Q ss_pred CCCCCcccceec-cCccccc
Q psy7834 125 YLDEAPYDIIHV-GGSIEDI 143 (492)
Q Consensus 125 ~~~~~~~D~i~~-~~~~~~l 143 (492)
+. +++||+|++ ..+++++
T Consensus 96 ~~-~~~~D~v~~~~~~~~~~ 114 (239)
T 3bxo_A 96 RL-GRKFSAVVSMFSSVGYL 114 (239)
T ss_dssp CC-SSCEEEEEECTTGGGGC
T ss_pred cc-CCCCcEEEEcCchHhhc
Confidence 76 678999995 3355544
No 409
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.04 E-value=5.2e-10 Score=106.59 Aligned_cols=87 Identities=21% Similarity=0.319 Sum_probs=70.8
Q ss_pred HHHHHHHHHhc-CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 44 AMVLDDLSEEL-TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 44 ~~~~~~l~~~~-~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
..+.+.+...+ .++.+|||+|||+|.++..+++.. +..+|+++|+|+.|++.|+++. .++.++++|+.
T Consensus 72 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~ 140 (269)
T 1p91_A 72 DAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY----------PQVTFCVASSH 140 (269)
T ss_dssp HHHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC----------TTSEEEECCTT
T ss_pred HHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC----------CCcEEEEcchh
Confidence 34444443322 578899999999999999999985 3379999999999999998875 46899999999
Q ss_pred CCCCCCCcccceeccCccc
Q psy7834 123 KGYLDEAPYDIIHVGGSIE 141 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~~~~~ 141 (492)
++++++++||+|++..+..
T Consensus 141 ~~~~~~~~fD~v~~~~~~~ 159 (269)
T 1p91_A 141 RLPFSDTSMDAIIRIYAPC 159 (269)
T ss_dssp SCSBCTTCEEEEEEESCCC
T ss_pred hCCCCCCceeEEEEeCChh
Confidence 9888888999999876543
No 410
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.02 E-value=2.1e-10 Score=105.07 Aligned_cols=89 Identities=18% Similarity=0.184 Sum_probs=70.7
Q ss_pred HHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC
Q psy7834 45 MVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG 124 (492)
Q Consensus 45 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 124 (492)
.++..+. ...++.+|||+|||+|..+..+++..++.++|+++|+++.+++.|++++++.++. ++++++++|+.+.
T Consensus 46 ~~l~~l~-~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~ 120 (210)
T 3c3p_A 46 RLLYLLA-RIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLI----DRVELQVGDPLGI 120 (210)
T ss_dssp HHHHHHH-HHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGG----GGEEEEESCHHHH
T ss_pred HHHHHHH-HhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC----ceEEEEEecHHHH
Confidence 3444432 3346789999999999999999998643589999999999999999998877763 5799999998764
Q ss_pred -CCCCCcccceeccCc
Q psy7834 125 -YLDEAPYDIIHVGGS 139 (492)
Q Consensus 125 -~~~~~~~D~i~~~~~ 139 (492)
+..++ ||+|++...
T Consensus 121 ~~~~~~-fD~v~~~~~ 135 (210)
T 3c3p_A 121 AAGQRD-IDILFMDCD 135 (210)
T ss_dssp HTTCCS-EEEEEEETT
T ss_pred hccCCC-CCEEEEcCC
Confidence 33345 999998744
No 411
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.02 E-value=7.6e-10 Score=103.91 Aligned_cols=87 Identities=20% Similarity=0.251 Sum_probs=70.1
Q ss_pred hHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecC
Q psy7834 41 FQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGD 120 (492)
Q Consensus 41 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 120 (492)
.+.+.+++.+ .+.++.+|||+|||+|.++..+++.. .+|+|+|+|++|++.++++.... ++++++++|
T Consensus 17 ~~~~~i~~~~--~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~-------~~v~~~~~D 84 (244)
T 1qam_A 17 HNIDKIMTNI--RLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVDH-------DNFQVLNKD 84 (244)
T ss_dssp HHHHHHHTTC--CCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTTC-------CSEEEECCC
T ss_pred HHHHHHHHhC--CCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhccC-------CCeEEEECh
Confidence 3466677666 66788999999999999999999986 79999999999999999987542 589999999
Q ss_pred CCCCCCCC-CcccceeccCcc
Q psy7834 121 GRKGYLDE-APYDIIHVGGSI 140 (492)
Q Consensus 121 ~~~~~~~~-~~~D~i~~~~~~ 140 (492)
+.++++++ ..| .|+++...
T Consensus 85 ~~~~~~~~~~~~-~vv~nlPy 104 (244)
T 1qam_A 85 ILQFKFPKNQSY-KIFGNIPY 104 (244)
T ss_dssp GGGCCCCSSCCC-EEEEECCG
T ss_pred HHhCCcccCCCe-EEEEeCCc
Confidence 99987763 345 45554433
No 412
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.02 E-value=8.9e-10 Score=104.74 Aligned_cols=79 Identities=25% Similarity=0.172 Sum_probs=70.2
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
.+++|++|||+|||+|.+++.+|+... ++|+++|+|+.+++.+++|++.++++ ++++++++|+.+.+ ..+.||
T Consensus 122 ~~~~g~~VlD~~aG~G~~~i~~a~~g~--~~V~avD~np~a~~~~~~N~~~N~v~----~~v~~~~~D~~~~~-~~~~~D 194 (278)
T 3k6r_A 122 VAKPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVE----DRMSAYNMDNRDFP-GENIAD 194 (278)
T ss_dssp HCCTTCEEEETTCTTTTTTHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCT----TTEEEECSCTTTCC-CCSCEE
T ss_pred hcCCCCEEEEecCcCcHHHHHHHHhcC--CeEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEeCcHHHhc-cccCCC
Confidence 467899999999999999999998853 69999999999999999999999985 78999999998875 357899
Q ss_pred ceeccC
Q psy7834 133 IIHVGG 138 (492)
Q Consensus 133 ~i~~~~ 138 (492)
.|+++.
T Consensus 195 ~Vi~~~ 200 (278)
T 3k6r_A 195 RILMGY 200 (278)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 998753
No 413
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.02 E-value=9e-10 Score=100.01 Aligned_cols=85 Identities=21% Similarity=0.314 Sum_probs=66.5
Q ss_pred HHHHHHHHHH-hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCC
Q psy7834 43 QAMVLDDLSE-ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDG 121 (492)
Q Consensus 43 ~~~~~~~l~~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 121 (492)
.+.++..+.. ...++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|+++. .+++++++|+
T Consensus 37 ~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~----------~~~~~~~~d~ 104 (200)
T 1ne2_A 37 AAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLG--AESVTAFDIDPDAIETAKRNC----------GGVNFMVADV 104 (200)
T ss_dssp HHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHTT--BSEEEEEESCHHHHHHHHHHC----------TTSEEEECCG
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhc----------CCCEEEECcH
Confidence 3444444421 34577899999999999999999873 158999999999999999986 3579999999
Q ss_pred CCCCCCCCcccceeccCcccc
Q psy7834 122 RKGYLDEAPYDIIHVGGSIED 142 (492)
Q Consensus 122 ~~~~~~~~~~D~i~~~~~~~~ 142 (492)
.+++ ++||+|+++..++.
T Consensus 105 ~~~~---~~~D~v~~~~p~~~ 122 (200)
T 1ne2_A 105 SEIS---GKYDTWIMNPPFGS 122 (200)
T ss_dssp GGCC---CCEEEEEECCCC--
T ss_pred HHCC---CCeeEEEECCCchh
Confidence 8864 68999999766643
No 414
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.02 E-value=1.1e-09 Score=102.88 Aligned_cols=79 Identities=18% Similarity=0.223 Sum_probs=66.6
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcC--------CCCccccCceEEEecCCCC-
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISG--------NPEFVKDGRIKFVLGDGRK- 123 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~--------~~~~~~~~~v~~~~~d~~~- 123 (492)
.+.++.+|||+|||+|.++..+++.. +..+|+|||+|+.|++.|++++..+ ++ .+++++++|+.+
T Consensus 46 ~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-----~nv~~~~~D~~~~ 119 (246)
T 2vdv_E 46 QMTKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-----QNINVLRGNAMKF 119 (246)
T ss_dssp CBSCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-----TTEEEEECCTTSC
T ss_pred cCCCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-----CcEEEEeccHHHH
Confidence 34577899999999999999999986 5579999999999999999987654 55 689999999987
Q ss_pred CC--CCCCcccceecc
Q psy7834 124 GY--LDEAPYDIIHVG 137 (492)
Q Consensus 124 ~~--~~~~~~D~i~~~ 137 (492)
++ ++..++|.|+..
T Consensus 120 l~~~~~~~~~d~v~~~ 135 (246)
T 2vdv_E 120 LPNFFEKGQLSKMFFC 135 (246)
T ss_dssp GGGTSCTTCEEEEEEE
T ss_pred HHHhccccccCEEEEE
Confidence 44 556789988764
No 415
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.02 E-value=1e-09 Score=103.44 Aligned_cols=74 Identities=24% Similarity=0.307 Sum_probs=64.8
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccc
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDI 133 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 133 (492)
..++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++....++ +++++++|+.+++.+ ++||+
T Consensus 39 ~~~~~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~------~v~~~~~d~~~~~~~-~~fD~ 108 (252)
T 1wzn_A 39 KREVRRVLDLACGTGIPTLELAERG---YEVVGLDLHEEMLRVARRKAKERNL------KIEFLQGDVLEIAFK-NEFDA 108 (252)
T ss_dssp SSCCCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTC------CCEEEESCGGGCCCC-SCEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHhcCC------ceEEEECChhhcccC-CCccE
Confidence 3567899999999999999999974 7999999999999999999877653 699999999987754 78999
Q ss_pred eecc
Q psy7834 134 IHVG 137 (492)
Q Consensus 134 i~~~ 137 (492)
|++.
T Consensus 109 v~~~ 112 (252)
T 1wzn_A 109 VTMF 112 (252)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9874
No 416
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.02 E-value=4.1e-10 Score=112.25 Aligned_cols=105 Identities=15% Similarity=0.100 Sum_probs=82.0
Q ss_pred CCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCC----------CCCCcEEEEEccCCCCC
Q psy7834 211 PGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNL----------MEGGRVQFVDGDGREGH 280 (492)
Q Consensus 211 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~----------~~~~~v~~~~~d~~~~~ 280 (492)
++.+|||+|||+|..+..++++. +..+|+++|+++.+++.+++|++.+.... .+..+++++++|+....
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~-~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALET-PAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHS-SCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH
Confidence 67899999999999999999986 34679999999999999999998861000 01235999999986532
Q ss_pred c-CCCCccEEEecCcc--hhhHHHHHHHhccCCeEEEEe
Q psy7834 281 A-AEGPYDVIYVGGAV--HHYPFKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 281 ~-~~~~fD~i~s~~~~--~~~~~~~~~~L~pgG~l~~~~ 316 (492)
. ..++||+|+.+... ..+.+.+.+.|||||.+++++
T Consensus 126 ~~~~~~fD~I~lDP~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 AERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHSTTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhccCCCCEEEeCCCCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 2 13579999987532 345578889999999999876
No 417
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.02 E-value=1e-09 Score=100.40 Aligned_cols=75 Identities=19% Similarity=0.358 Sum_probs=65.4
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCc-EEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTG-KVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~-~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
..++.+|||+|||+|.++..+ + . +|+++|+|+.|++.|+++. .+++++++|+.++++++++||
T Consensus 34 ~~~~~~vLdiG~G~G~~~~~l----~--~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~fD 97 (211)
T 2gs9_A 34 LPPGESLLEVGAGTGYWLRRL----P--YPQKVGVEPSEAMLAVGRRRA----------PEATWVRAWGEALPFPGESFD 97 (211)
T ss_dssp CCCCSEEEEETCTTCHHHHHC----C--CSEEEEECCCHHHHHHHHHHC----------TTSEEECCCTTSCCSCSSCEE
T ss_pred cCCCCeEEEECCCCCHhHHhC----C--CCeEEEEeCCHHHHHHHHHhC----------CCcEEEEcccccCCCCCCcEE
Confidence 347889999999999999888 2 4 9999999999999999876 368999999999888888999
Q ss_pred ceeccCcccccc
Q psy7834 133 IIHVGGSIEDIP 144 (492)
Q Consensus 133 ~i~~~~~~~~l~ 144 (492)
+|++..+++++.
T Consensus 98 ~v~~~~~l~~~~ 109 (211)
T 2gs9_A 98 VVLLFTTLEFVE 109 (211)
T ss_dssp EEEEESCTTTCS
T ss_pred EEEEcChhhhcC
Confidence 999988876654
No 418
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.01 E-value=5.6e-10 Score=108.92 Aligned_cols=85 Identities=14% Similarity=0.078 Sum_probs=73.8
Q ss_pred HHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCC
Q psy7834 47 LDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYL 126 (492)
Q Consensus 47 ~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 126 (492)
...+ .+.++.+|||+|||+|..+..+++..+..++|+|+|+++.+++.++++++++++ .+++++++|+.+++.
T Consensus 111 ~~~l--~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~-----~~v~~~~~D~~~~~~ 183 (315)
T 1ixk_A 111 PVAL--DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV-----LNVILFHSSSLHIGE 183 (315)
T ss_dssp HHHH--CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC-----CSEEEESSCGGGGGG
T ss_pred HHHh--CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC-----CeEEEEECChhhccc
Confidence 3444 678899999999999999999999875558999999999999999999988887 689999999988765
Q ss_pred CCCcccceeccC
Q psy7834 127 DEAPYDIIHVGG 138 (492)
Q Consensus 127 ~~~~~D~i~~~~ 138 (492)
..++||+|++..
T Consensus 184 ~~~~fD~Il~d~ 195 (315)
T 1ixk_A 184 LNVEFDKILLDA 195 (315)
T ss_dssp GCCCEEEEEEEC
T ss_pred ccccCCEEEEeC
Confidence 567899999853
No 419
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.01 E-value=6e-10 Score=102.00 Aligned_cols=77 Identities=21% Similarity=0.261 Sum_probs=67.0
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
.+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++. +++++++|+..++ .+++||
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~d~~~~~-~~~~fD 104 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAAG---FDVDATDGSPELAAEASRRL-----------GRPVRTMLFHQLD-AIDAYD 104 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHH-----------TSCCEECCGGGCC-CCSCEE
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHcC---CeEEEECCCHHHHHHHHHhc-----------CCceEEeeeccCC-CCCcEE
Confidence 45678899999999999999999984 79999999999999999875 3568899998887 678999
Q ss_pred ceeccCcccccc
Q psy7834 133 IIHVGGSIEDIP 144 (492)
Q Consensus 133 ~i~~~~~~~~l~ 144 (492)
+|++..+++++.
T Consensus 105 ~v~~~~~l~~~~ 116 (211)
T 3e23_A 105 AVWAHACLLHVP 116 (211)
T ss_dssp EEEECSCGGGSC
T ss_pred EEEecCchhhcC
Confidence 999988877654
No 420
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.01 E-value=1.5e-09 Score=103.65 Aligned_cols=105 Identities=17% Similarity=0.155 Sum_probs=79.6
Q ss_pred cChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEE
Q psy7834 193 SSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGP-TGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQF 271 (492)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~ 271 (492)
..+.+.+.+++.+. +.++.+|||||||+|.+|..|+++... .++|+|+|+|++|++.++++. . .++++
T Consensus 26 ~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~--------~~v~~ 94 (279)
T 3uzu_A 26 VDHGVIDAIVAAIR--PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-G--------ELLEL 94 (279)
T ss_dssp CCHHHHHHHHHHHC--CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-G--------GGEEE
T ss_pred CCHHHHHHHHHhcC--CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-C--------CCcEE
Confidence 45677778888775 678899999999999999999998743 356999999999999999884 2 37999
Q ss_pred EEccCCCCCcCCC------CccEEEecCcchhhHHHHHHHhcc
Q psy7834 272 VDGDGREGHAAEG------PYDVIYVGGAVHHYPFKLMDQLKP 308 (492)
Q Consensus 272 ~~~d~~~~~~~~~------~fD~i~s~~~~~~~~~~~~~~L~p 308 (492)
+++|+...+.++- ..+.|++|...+--..-+.++|..
T Consensus 95 i~~D~~~~~~~~~~~~~~~~~~~vv~NlPY~iss~il~~ll~~ 137 (279)
T 3uzu_A 95 HAGDALTFDFGSIARPGDEPSLRIIGNLPYNISSPLLFHLMSF 137 (279)
T ss_dssp EESCGGGCCGGGGSCSSSSCCEEEEEECCHHHHHHHHHHHGGG
T ss_pred EECChhcCChhHhcccccCCceEEEEccCccccHHHHHHHHhc
Confidence 9999977554321 234678876654434456677754
No 421
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.01 E-value=1.3e-09 Score=98.12 Aligned_cols=100 Identities=21% Similarity=0.191 Sum_probs=77.1
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCC---------
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREG--------- 279 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--------- 279 (492)
+.+..+|||+|| |+.|..+|+. +.++|+++|.+++..+.|++++++++.. ...+++++.+|+.+.
T Consensus 28 l~~a~~VLEiGt--GySTl~lA~~--~~g~VvtvE~d~~~~~~ar~~l~~~g~~--~~~~I~~~~gda~~~~~wg~p~~~ 101 (202)
T 3cvo_A 28 YEEAEVILEYGS--GGSTVVAAEL--PGKHVTSVESDRAWARMMKAWLAANPPA--EGTEVNIVWTDIGPTGDWGHPVSD 101 (202)
T ss_dssp HHHCSEEEEESC--SHHHHHHHTS--TTCEEEEEESCHHHHHHHHHHHHHSCCC--TTCEEEEEECCCSSBCGGGCBSSS
T ss_pred hhCCCEEEEECc--hHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHcCCC--CCCceEEEEeCchhhhcccccccc
Confidence 345789999998 5889899874 3689999999999999999999986510 045899999997543
Q ss_pred -----Cc----------CCCCccEEEecCcch-hhHHHHHHHhccCCeEEE
Q psy7834 280 -----HA----------AEGPYDVIYVGGAVH-HYPFKLMDQLKPGGVMWF 314 (492)
Q Consensus 280 -----~~----------~~~~fD~i~s~~~~~-~~~~~~~~~L~pgG~l~~ 314 (492)
+. ..++||+||..+... .....+.+.|+|||++++
T Consensus 102 ~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 102 AKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFRVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp TTGGGTTHHHHGGGGCTTCCCCSEEEECSSSHHHHHHHHHHHCSSCEEEEE
T ss_pred hhhhhHHHHhhhhhccccCCCCCEEEEeCCCchhHHHHHHHhcCCCeEEEE
Confidence 11 237899999998643 222356799999999977
No 422
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.01 E-value=3.1e-10 Score=112.98 Aligned_cols=92 Identities=16% Similarity=0.283 Sum_probs=76.3
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCcCCCCccE
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHAAEGPYDV 288 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 288 (492)
+.++.+|||||||+|.++..++++. +..+++++|+ +.|++.|++ ..+++++.+|+.+ +.+ +||+
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~-~~~--~~D~ 254 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTG-----------NENLNFVGGDMFK-SIP--SADA 254 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCC-----------CSSEEEEECCTTT-CCC--CCSE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhccc-----------CCCcEEEeCccCC-CCC--CceE
Confidence 3466899999999999999999987 7789999999 788876653 1359999999876 333 4999
Q ss_pred EEecCcchhhHH--------HHHHHhcc---CCeEEEEe
Q psy7834 289 IYVGGAVHHYPF--------KLMDQLKP---GGVMWFTI 316 (492)
Q Consensus 289 i~s~~~~~~~~~--------~~~~~L~p---gG~l~~~~ 316 (492)
|++..++|++++ ++.++|+| ||++++..
T Consensus 255 v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 255 VLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred EEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 999999997764 67899999 99999854
No 423
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.01 E-value=2e-09 Score=101.06 Aligned_cols=91 Identities=18% Similarity=0.218 Sum_probs=69.5
Q ss_pred cChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE
Q psy7834 193 SSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV 272 (492)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~ 272 (492)
..+.+...+++.+. +.++.+|||+|||+|.++..++++. ++|+|+|+|+.|++.+++++.. .++++++
T Consensus 14 ~d~~~~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~-------~~~v~~~ 81 (244)
T 1qam_A 14 TSKHNIDKIMTNIR--LNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD-------HDNFQVL 81 (244)
T ss_dssp CCHHHHHHHHTTCC--CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT-------CCSEEEE
T ss_pred CCHHHHHHHHHhCC--CCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc-------CCCeEEE
Confidence 34555555555543 5678899999999999999999885 4799999999999999998753 2479999
Q ss_pred EccCCCCCcCC-CCccEEEecCcch
Q psy7834 273 DGDGREGHAAE-GPYDVIYVGGAVH 296 (492)
Q Consensus 273 ~~d~~~~~~~~-~~fD~i~s~~~~~ 296 (492)
++|+.+.+.++ ..| .|+++...+
T Consensus 82 ~~D~~~~~~~~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 82 NKDILQFKFPKNQSY-KIFGNIPYN 105 (244)
T ss_dssp CCCGGGCCCCSSCCC-EEEEECCGG
T ss_pred EChHHhCCcccCCCe-EEEEeCCcc
Confidence 99997765443 455 577775543
No 424
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.01 E-value=9.3e-10 Score=112.68 Aligned_cols=123 Identities=17% Similarity=0.160 Sum_probs=91.3
Q ss_pred CCcccChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhC------------CCCeEEEEeCCHHHHHHHHHHH
Q psy7834 189 GSVMSSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVG------------PTGKVYAVEHIEDLVAQANKSM 256 (492)
Q Consensus 189 ~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~------------~~~~v~giD~s~~~l~~a~~~~ 256 (492)
|...+.+.+...+++.+. ..++.+|||.|||+|.++..+++... ...+++|+|+++.+++.|+.|+
T Consensus 151 G~fyTP~~v~~~mv~~l~--~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl 228 (445)
T 2okc_A 151 GQYFTPRPLIQAMVDCIN--PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNL 228 (445)
T ss_dssp GGGCCCHHHHHHHHHHHC--CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred CcccCcHHHHHHHHHHhC--CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHH
Confidence 444455566677777664 46678999999999999998887641 1346999999999999999998
Q ss_pred HhhCCCCCCCCcEEEEEccCCCCCcCCCCccEEEecCcchh-----------------------hHHHHHHHhccCCeEE
Q psy7834 257 HTYYPNLMEGGRVQFVDGDGREGHAAEGPYDVIYVGGAVHH-----------------------YPFKLMDQLKPGGVMW 313 (492)
Q Consensus 257 ~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~s~~~~~~-----------------------~~~~~~~~L~pgG~l~ 313 (492)
...+. ...++.+.++|...... .++||+|++|..+.. +...+.+.|||||+++
T Consensus 229 ~l~g~---~~~~~~i~~gD~l~~~~-~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a 304 (445)
T 2okc_A 229 YLHGI---GTDRSPIVCEDSLEKEP-STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAA 304 (445)
T ss_dssp HHTTC---CSSCCSEEECCTTTSCC-SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEE
T ss_pred HHhCC---CcCCCCEeeCCCCCCcc-cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEE
Confidence 76541 11156789999865433 348999999865421 2347889999999999
Q ss_pred EEeC
Q psy7834 314 FTIG 317 (492)
Q Consensus 314 ~~~~ 317 (492)
+.++
T Consensus 305 ~V~p 308 (445)
T 2okc_A 305 VVLP 308 (445)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 8764
No 425
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.01 E-value=7e-10 Score=100.78 Aligned_cols=74 Identities=16% Similarity=0.125 Sum_probs=65.2
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccc
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDI 133 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 133 (492)
+.++ +|||+|||+|.++..+++.. .+|+++|+|+.|++.|+++....+ .+++++++|+.+.++++++||+
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~~~~~~fD~ 97 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASLG---YEVTAVDQSSVGLAKAKQLAQEKG------VKITTVQSNLADFDIVADAWEG 97 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTTT---CEEEEECSSHHHHHHHHHHHHHHT------CCEEEECCBTTTBSCCTTTCSE
T ss_pred CCCC-CEEEECCCCCHhHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhcC------CceEEEEcChhhcCCCcCCccE
Confidence 4466 99999999999999999874 799999999999999999987654 3799999999998877889999
Q ss_pred eecc
Q psy7834 134 IHVG 137 (492)
Q Consensus 134 i~~~ 137 (492)
|++.
T Consensus 98 v~~~ 101 (202)
T 2kw5_A 98 IVSI 101 (202)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9884
No 426
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.01 E-value=2.7e-10 Score=100.40 Aligned_cols=91 Identities=14% Similarity=0.031 Sum_probs=70.9
Q ss_pred hHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecC
Q psy7834 41 FQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGD 120 (492)
Q Consensus 41 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 120 (492)
.+...+++.+...+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++...+++ +++++++|
T Consensus 26 ~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~d 96 (171)
T 1ws6_A 26 RLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEG---WEAVLVEKDPEAVRLLKENVRRTGL------GARVVALP 96 (171)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTT---CEEEEECCCHHHHHHHHHHHHHHTC------CCEEECSC
T ss_pred HHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHHcCC------ceEEEecc
Confidence 34556666663223378899999999999999999985 4599999999999999999877542 78999999
Q ss_pred CCCCCC--C--CCcccceeccCcc
Q psy7834 121 GRKGYL--D--EAPYDIIHVGGSI 140 (492)
Q Consensus 121 ~~~~~~--~--~~~~D~i~~~~~~ 140 (492)
+.+... . .++||+|+++...
T Consensus 97 ~~~~~~~~~~~~~~~D~i~~~~~~ 120 (171)
T 1ws6_A 97 VEVFLPEAKAQGERFTVAFMAPPY 120 (171)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCT
T ss_pred HHHHHHhhhccCCceEEEEECCCC
Confidence 876321 1 2479999997655
No 427
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.00 E-value=3.5e-10 Score=106.91 Aligned_cols=87 Identities=25% Similarity=0.416 Sum_probs=71.0
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
+.+++.+...+.++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.|+++...+++ . ++++++|+.+
T Consensus 108 ~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g---~~v~gvDi~~~~v~~a~~n~~~~~~-----~-v~~~~~d~~~ 178 (254)
T 2nxc_A 108 RLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLG---GKALGVDIDPMVLPQAEANAKRNGV-----R-PRFLEGSLEA 178 (254)
T ss_dssp HHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCGGGHHHHHHHHHHTTC-----C-CEEEESCHHH
T ss_pred HHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhC---CeEEEEECCHHHHHHHHHHHHHcCC-----c-EEEEECChhh
Confidence 34445553346788999999999999999999874 4999999999999999999988776 4 8999999876
Q ss_pred CCCCCCcccceeccCcc
Q psy7834 124 GYLDEAPYDIIHVGGSI 140 (492)
Q Consensus 124 ~~~~~~~~D~i~~~~~~ 140 (492)
. ++.++||+|+++...
T Consensus 179 ~-~~~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 179 A-LPFGPFDLLVANLYA 194 (254)
T ss_dssp H-GGGCCEEEEEEECCH
T ss_pred c-CcCCCCCEEEECCcH
Confidence 3 345789999987544
No 428
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.00 E-value=1.7e-09 Score=97.14 Aligned_cols=71 Identities=27% Similarity=0.446 Sum_probs=64.0
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccc
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDI 133 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 133 (492)
+.++.+|||+|||+|.++..+++.. .+|+++|+++.+++.|+++. .+++++++|+.+.++++++||+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~~D~ 110 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQG---HDVLGTDLDPILIDYAKQDF----------PEARWVVGDLSVDQISETDFDL 110 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHC----------TTSEEEECCTTTSCCCCCCEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCC---CcEEEEcCCHHHHHHHHHhC----------CCCcEEEcccccCCCCCCceeE
Confidence 5678899999999999999999984 79999999999999999876 4689999999988777789999
Q ss_pred eecc
Q psy7834 134 IHVG 137 (492)
Q Consensus 134 i~~~ 137 (492)
|+++
T Consensus 111 i~~~ 114 (195)
T 3cgg_A 111 IVSA 114 (195)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9986
No 429
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.99 E-value=8.1e-10 Score=102.46 Aligned_cols=78 Identities=28% Similarity=0.345 Sum_probs=65.8
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC---CCCCc
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY---LDEAP 130 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~ 130 (492)
+.++.+|||+|||+|.++..+++..++.++|+|+|+|+.|++.+++++++. .+++++++|+.+.. ...++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-------~~v~~~~~d~~~~~~~~~~~~~ 143 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-------RNIVPILGDATKPEEYRALVPK 143 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-------TTEEEEECCTTCGGGGTTTCCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-------CCCEEEEccCCCcchhhcccCC
Confidence 668899999999999999999998766689999999999999999988653 47999999998732 12358
Q ss_pred ccceeccC
Q psy7834 131 YDIIHVGG 138 (492)
Q Consensus 131 ~D~i~~~~ 138 (492)
||+|++..
T Consensus 144 ~D~v~~~~ 151 (227)
T 1g8a_A 144 VDVIFEDV 151 (227)
T ss_dssp EEEEEECC
T ss_pred ceEEEECC
Confidence 99999743
No 430
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.99 E-value=4.9e-10 Score=114.00 Aligned_cols=113 Identities=19% Similarity=0.227 Sum_probs=84.5
Q ss_pred CCcccChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCc
Q psy7834 189 GSVMSSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGR 268 (492)
Q Consensus 189 ~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~ 268 (492)
|...+.+.+...+++.+. ..++.+|||+|||+|.++..++++.++..+++|+|+++.+++.| .+
T Consensus 19 g~~~TP~~l~~~~~~~~~--~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------------~~ 82 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAE--APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------------PW 82 (421)
T ss_dssp --CCCCHHHHHHHHHHCC--CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------------TT
T ss_pred ceEeCCHHHHHHHHHhhc--cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------------CC
Confidence 444555666666666654 34567999999999999999998865567999999999998776 15
Q ss_pred EEEEEccCCCCCcCCCCccEEEecCcch-----------------------------------hhHHHHHHHhccCCeEE
Q psy7834 269 VQFVDGDGREGHAAEGPYDVIYVGGAVH-----------------------------------HYPFKLMDQLKPGGVMW 313 (492)
Q Consensus 269 v~~~~~d~~~~~~~~~~fD~i~s~~~~~-----------------------------------~~~~~~~~~L~pgG~l~ 313 (492)
++++++|+.... ..++||+|++|.... .+...+.++|+|||+++
T Consensus 83 ~~~~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~ 161 (421)
T 2ih2_A 83 AEGILADFLLWE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLV 161 (421)
T ss_dssp EEEEESCGGGCC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEE
T ss_pred CcEEeCChhhcC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEE
Confidence 899999987643 456899999974321 11236778999999999
Q ss_pred EEeCC
Q psy7834 314 FTIGN 318 (492)
Q Consensus 314 ~~~~~ 318 (492)
+.++.
T Consensus 162 ~i~p~ 166 (421)
T 2ih2_A 162 FVVPA 166 (421)
T ss_dssp EEEEG
T ss_pred EEECh
Confidence 97764
No 431
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.99 E-value=1.2e-09 Score=106.45 Aligned_cols=92 Identities=15% Similarity=0.110 Sum_probs=69.7
Q ss_pred HHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcC-------CCCccccCceEEE
Q psy7834 45 MVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISG-------NPEFVKDGRIKFV 117 (492)
Q Consensus 45 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~-------~~~~~~~~~v~~~ 117 (492)
.+++.+.....++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|+++.... +. .+++++
T Consensus 23 ~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~-----~~~~~~ 95 (313)
T 3bgv_A 23 EFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGR--INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYI-----FSAEFI 95 (313)
T ss_dssp HHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CC-----CEEEEE
T ss_pred HHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcC--CCEEEEEeCCHHHHHHHHHHHHHhhhccccccc-----ceEEEE
Confidence 3444442233477899999999999999999853 379999999999999999987542 22 479999
Q ss_pred ecCCCCCC----CC--CCcccceeccCccccc
Q psy7834 118 LGDGRKGY----LD--EAPYDIIHVGGSIEDI 143 (492)
Q Consensus 118 ~~d~~~~~----~~--~~~~D~i~~~~~~~~l 143 (492)
++|+++.+ ++ +++||+|+++.+++.+
T Consensus 96 ~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~ 127 (313)
T 3bgv_A 96 TADSSKELLIDKFRDPQMCFDICSCQFVCHYS 127 (313)
T ss_dssp ECCTTTSCSTTTCSSTTCCEEEEEEETCGGGG
T ss_pred EecccccchhhhcccCCCCEEEEEEecchhhc
Confidence 99999875 43 4589999998776543
No 432
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.99 E-value=4.9e-10 Score=111.70 Aligned_cols=103 Identities=14% Similarity=0.016 Sum_probs=82.7
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCc-EEEEEccCCCCCc--CCCCc
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGR-VQFVDGDGREGHA--AEGPY 286 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~-v~~~~~d~~~~~~--~~~~f 286 (492)
.+|.+|||++||+|.+++.++.+.+..++|+++|+++.+++.+++|++.++. ..+ ++++++|+.+... ..++|
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl----~~~~v~v~~~Da~~~l~~~~~~~f 126 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI----PEDRYEIHGMEANFFLRKEWGFGF 126 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC----CGGGEEEECSCHHHHHHSCCSSCE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC----CCceEEEEeCCHHHHHHHhhCCCC
Confidence 4688999999999999999998752236899999999999999999998751 234 9999999865322 24579
Q ss_pred cEEEecCc--chhhHHHHHHHhccCCeEEEEe
Q psy7834 287 DVIYVGGA--VHHYPFKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 287 D~i~s~~~--~~~~~~~~~~~L~pgG~l~~~~ 316 (492)
|+|+.+.. ...+.+.+.+.|+|||.|++++
T Consensus 127 D~V~lDP~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 127 DYVDLDPFGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEECCCcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 99999872 2345667888999999999987
No 433
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.98 E-value=1.3e-09 Score=101.93 Aligned_cols=75 Identities=29% Similarity=0.414 Sum_probs=65.2
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
.+.++.+|||+|||+|.++..+++. .+|+|+|+|+.|++.|+++....+ .+++++++|+.+.+++ ++||
T Consensus 30 ~~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~~~-~~fD 98 (243)
T 3d2l_A 30 QVEPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN------RHVDFWVQDMRELELP-EPVD 98 (243)
T ss_dssp HSCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT------CCCEEEECCGGGCCCS-SCEE
T ss_pred HcCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC------CceEEEEcChhhcCCC-CCcC
Confidence 4567789999999999999999876 589999999999999999987654 4789999999888765 8899
Q ss_pred ceeccC
Q psy7834 133 IIHVGG 138 (492)
Q Consensus 133 ~i~~~~ 138 (492)
+|++..
T Consensus 99 ~v~~~~ 104 (243)
T 3d2l_A 99 AITILC 104 (243)
T ss_dssp EEEECT
T ss_pred EEEEeC
Confidence 999854
No 434
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.98 E-value=3.9e-10 Score=104.70 Aligned_cols=83 Identities=24% Similarity=0.288 Sum_probs=69.5
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC--CCC--
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY--LDE-- 128 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~-- 128 (492)
...++++|||+|||+|.++..+++..++.++|+++|+++.+++.|++++++.++. .+++++++|+.+.. +..
T Consensus 66 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~----~~i~~~~~d~~~~~~~~~~~~ 141 (229)
T 2avd_A 66 RLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAE----HKIDLRLKPALETLDELLAAG 141 (229)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCT----TTEEEEESCHHHHHHHHHHTT
T ss_pred HhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC----CeEEEEEcCHHHHHHHHHhcC
Confidence 4567889999999999999999998644589999999999999999999888874 68999999986542 111
Q ss_pred --CcccceeccCc
Q psy7834 129 --APYDIIHVGGS 139 (492)
Q Consensus 129 --~~~D~i~~~~~ 139 (492)
++||+|++...
T Consensus 142 ~~~~~D~v~~d~~ 154 (229)
T 2avd_A 142 EAGTFDVAVVDAD 154 (229)
T ss_dssp CTTCEEEEEECSC
T ss_pred CCCCccEEEECCC
Confidence 68999999755
No 435
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.98 E-value=5.6e-10 Score=107.62 Aligned_cols=88 Identities=17% Similarity=0.148 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCC
Q psy7834 42 QQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDG 121 (492)
Q Consensus 42 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 121 (492)
+.+.+++.+ .+.++.+|||+|||+|.++..+++..+ .++|+|+|+|+.|++.|+++++.++ .+++++++|.
T Consensus 14 Ll~e~l~~L--~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g------~~v~~v~~d~ 84 (301)
T 1m6y_A 14 MVREVIEFL--KPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS------DRVSLFKVSY 84 (301)
T ss_dssp THHHHHHHH--CCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT------TTEEEEECCG
T ss_pred HHHHHHHhc--CCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEECCH
Confidence 367788888 788899999999999999999999863 4899999999999999999987754 4899999998
Q ss_pred CCCCC--C---CCcccceeccC
Q psy7834 122 RKGYL--D---EAPYDIIHVGG 138 (492)
Q Consensus 122 ~~~~~--~---~~~~D~i~~~~ 138 (492)
.+++. . ..+||.|++..
T Consensus 85 ~~l~~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 85 READFLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp GGHHHHHHHTTCSCEEEEEEEC
T ss_pred HHHHHHHHhcCCCCCCEEEEcC
Confidence 77642 1 15799998754
No 436
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.98 E-value=7.6e-10 Score=103.85 Aligned_cols=80 Identities=20% Similarity=0.218 Sum_probs=66.5
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCC----
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDE---- 128 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~---- 128 (492)
.+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++... .+++++++|+.+.+...
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~---~~v~gvD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~~~~~~~~~ 121 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFF---PRVIGLDVSKSALEIAAKENTA--------ANISYRLLDGLVPEQAAQIHS 121 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHS---SCEEEEESCHHHHHHHHHHSCC--------TTEEEEECCTTCHHHHHHHHH
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhC---CCEEEEECCHHHHHHHHHhCcc--------cCceEEECccccccccccccc
Confidence 45678899999999999999999986 5899999999999999998732 58999999998865432
Q ss_pred -CcccceeccCccccc
Q psy7834 129 -APYDIIHVGGSIEDI 143 (492)
Q Consensus 129 -~~~D~i~~~~~~~~l 143 (492)
.+||+|++...++.+
T Consensus 122 ~~~~d~v~~~~~~~~~ 137 (245)
T 3ggd_A 122 EIGDANIYMRTGFHHI 137 (245)
T ss_dssp HHCSCEEEEESSSTTS
T ss_pred ccCccEEEEcchhhcC
Confidence 248999997776543
No 437
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.98 E-value=5.5e-10 Score=107.66 Aligned_cols=92 Identities=18% Similarity=0.260 Sum_probs=74.9
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEEEc
Q psy7834 195 PKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFVDG 274 (492)
Q Consensus 195 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~ 274 (492)
|.+...+++.+. +.++.+|||+|||+|..+..+++++ +.++|+|+|+|+.|++.|++++..++ .+++++++
T Consensus 12 pvLl~e~l~~L~--~~~g~~vLD~g~G~G~~s~~la~~~-~~~~VigvD~d~~al~~A~~~~~~~g------~~v~~v~~ 82 (301)
T 1m6y_A 12 PVMVREVIEFLK--PEDEKIILDCTVGEGGHSRAILEHC-PGCRIIGIDVDSEVLRIAEEKLKEFS------DRVSLFKV 82 (301)
T ss_dssp CTTHHHHHHHHC--CCTTCEEEETTCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTGGGT------TTEEEEEC
T ss_pred HHHHHHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEEC
Confidence 345567777775 6788999999999999999999987 46799999999999999999987753 47999999
Q ss_pred cCCCCCc--C---CCCccEEEecCcc
Q psy7834 275 DGREGHA--A---EGPYDVIYVGGAV 295 (492)
Q Consensus 275 d~~~~~~--~---~~~fD~i~s~~~~ 295 (492)
|+.+... . .++||.|+++...
T Consensus 83 d~~~l~~~l~~~g~~~~D~Vl~D~gv 108 (301)
T 1m6y_A 83 SYREADFLLKTLGIEKVDGILMDLGV 108 (301)
T ss_dssp CGGGHHHHHHHTTCSCEEEEEEECSC
T ss_pred CHHHHHHHHHhcCCCCCCEEEEcCcc
Confidence 9866431 1 1579999987654
No 438
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.98 E-value=5.7e-10 Score=108.93 Aligned_cols=106 Identities=18% Similarity=0.190 Sum_probs=78.2
Q ss_pred CCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCC---CcEEEEEccCCCCCc----C
Q psy7834 210 KPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEG---GRVQFVDGDGREGHA----A 282 (492)
Q Consensus 210 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~----~ 282 (492)
+.+.+||+||||+|.++..+++.. + .+|+++|+++.+++.|++++...+...... ++++++.+|+..... .
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~-~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~ 264 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLK-P-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 264 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC-C-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc
Confidence 356899999999999999998874 4 789999999999999999976422100111 279999999876432 3
Q ss_pred CCCccEEEecCcc-h-----------hhHHHH----HHHhccCCeEEEEeC
Q psy7834 283 EGPYDVIYVGGAV-H-----------HYPFKL----MDQLKPGGVMWFTIG 317 (492)
Q Consensus 283 ~~~fD~i~s~~~~-~-----------~~~~~~----~~~L~pgG~l~~~~~ 317 (492)
.++||+|+++..- + .+-..+ .++|+|||.+++...
T Consensus 265 ~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 265 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 5789999987532 1 111244 799999999998653
No 439
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.98 E-value=1.1e-09 Score=105.99 Aligned_cols=86 Identities=14% Similarity=0.123 Sum_probs=68.5
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
...+++.+ .. ++.+|||||||+|.++..+++.. .+|+|+|+|+.|++.|+++....++. ...+++++++|+.
T Consensus 72 ~~~~~~~~--~~-~~~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 72 AREFATRT--GP-VSGPVLELAAGMGRLTFPFLDLG---WEVTALELSTSVLAAFRKRLAEAPAD--VRDRCTLVQGDMS 143 (299)
T ss_dssp HHHHHHHH--CC-CCSCEEEETCTTTTTHHHHHTTT---CCEEEEESCHHHHHHHHHHHHTSCHH--HHTTEEEEECBTT
T ss_pred HHHHHHhh--CC-CCCcEEEEeccCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHhhcccc--cccceEEEeCchh
Confidence 34555555 33 44599999999999999999984 78999999999999999998775420 0037999999999
Q ss_pred CCCCCCCcccceecc
Q psy7834 123 KGYLDEAPYDIIHVG 137 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~ 137 (492)
++++ +++||+|++.
T Consensus 144 ~~~~-~~~fD~v~~~ 157 (299)
T 3g2m_A 144 AFAL-DKRFGTVVIS 157 (299)
T ss_dssp BCCC-SCCEEEEEEC
T ss_pred cCCc-CCCcCEEEEC
Confidence 9876 6899999863
No 440
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.98 E-value=6.7e-10 Score=103.94 Aligned_cols=76 Identities=21% Similarity=0.260 Sum_probs=64.8
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC--CCCCCc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG--YLDEAP 130 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~ 130 (492)
.+.++.+|||||||+|.++..+++.. .+|+|+|+|+.|++.|+++ ++++++|+.+. ++++++
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~-------------~~~~~~d~~~~~~~~~~~~ 101 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEEG---IESIGVDINEDMIKFCEGK-------------FNVVKSDAIEYLKSLPDKY 101 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHHT---CCEEEECSCHHHHHHHHTT-------------SEEECSCHHHHHHTSCTTC
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhCC---CcEEEEECCHHHHHHHHhh-------------cceeeccHHHHhhhcCCCC
Confidence 35677999999999999999999984 6899999999999998864 57889998775 667899
Q ss_pred ccceeccCcccccc
Q psy7834 131 YDIIHVGGSIEDIP 144 (492)
Q Consensus 131 ~D~i~~~~~~~~l~ 144 (492)
||+|++..+++++.
T Consensus 102 fD~i~~~~~l~~~~ 115 (240)
T 3dli_A 102 LDGVMISHFVEHLD 115 (240)
T ss_dssp BSEEEEESCGGGSC
T ss_pred eeEEEECCchhhCC
Confidence 99999987776554
No 441
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.97 E-value=1.1e-11 Score=116.81 Aligned_cols=111 Identities=23% Similarity=0.234 Sum_probs=83.9
Q ss_pred cChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE
Q psy7834 193 SSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV 272 (492)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~ 272 (492)
..+...+.+++.+. +.++.+|||+|||+|.++..+++.. ++|+|+|+|+.|++.|++++.. ..+++++
T Consensus 13 ~~~~~~~~i~~~~~--~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~~-------~~~v~~~ 80 (245)
T 1yub_A 13 TSEKVLNQIIKQLN--LKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLKL-------NTRVTLI 80 (245)
T ss_dssp CCTTTHHHHHHHCC--CCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTTT-------CSEEEEC
T ss_pred CCHHHHHHHHHhcC--CCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhcc-------CCceEEE
Confidence 34455666776664 5678899999999999999999884 5799999999999998877642 2479999
Q ss_pred EccCCCCCcC-CCCccEEEecCcch-------hh--------------HHHHHHHhccCCeEEEEe
Q psy7834 273 DGDGREGHAA-EGPYDVIYVGGAVH-------HY--------------PFKLMDQLKPGGVMWFTI 316 (492)
Q Consensus 273 ~~d~~~~~~~-~~~fD~i~s~~~~~-------~~--------------~~~~~~~L~pgG~l~~~~ 316 (492)
++|+.+.+.+ +++| .|+++...+ ++ .+.+.++|+|||++++.+
T Consensus 81 ~~D~~~~~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 81 HQDILQFQFPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp CSCCTTTTCCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred ECChhhcCcccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 9999876544 3678 777764321 11 135889999999988754
No 442
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.97 E-value=5.7e-10 Score=103.99 Aligned_cols=84 Identities=23% Similarity=0.326 Sum_probs=69.2
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC----CCCC
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG----YLDE 128 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~----~~~~ 128 (492)
...++.+|||+|||+|+.+..+++..++.++|+++|+++++++.|++++++.++. ++++++++|+.+. +..+
T Consensus 69 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~----~~i~~~~~d~~~~l~~l~~~~ 144 (232)
T 3cbg_A 69 SLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVA----EKISLRLGPALATLEQLTQGK 144 (232)
T ss_dssp HHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG----GGEEEEESCHHHHHHHHHTSS
T ss_pred HhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHHHHHhcC
Confidence 3457789999999999999999998754589999999999999999999887763 5799999997542 2223
Q ss_pred --CcccceeccCcc
Q psy7834 129 --APYDIIHVGGSI 140 (492)
Q Consensus 129 --~~~D~i~~~~~~ 140 (492)
++||+|++....
T Consensus 145 ~~~~fD~V~~d~~~ 158 (232)
T 3cbg_A 145 PLPEFDLIFIDADK 158 (232)
T ss_dssp SCCCEEEEEECSCG
T ss_pred CCCCcCEEEECCCH
Confidence 789999987653
No 443
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.96 E-value=7.4e-10 Score=105.93 Aligned_cols=88 Identities=18% Similarity=0.176 Sum_probs=67.4
Q ss_pred cCCCCceEEEeccc------cHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEE-EEccCCCCCc
Q psy7834 209 LKPGAKVLDIGSGS------GYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQF-VDGDGREGHA 281 (492)
Q Consensus 209 ~~~~~~vLDiGcG~------G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~-~~~d~~~~~~ 281 (492)
++++.+|||+|||+ |. ..++++.++.++|+|+|+|+. + .++++ +++|+.+...
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-----------------~~v~~~i~gD~~~~~~ 120 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-----------------SDADSTLIGDCATVHT 120 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-----------------CSSSEEEESCGGGCCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-----------------CCCEEEEECccccCCc
Confidence 67889999999944 66 556777655789999999998 1 14678 9999976543
Q ss_pred CCCCccEEEecCcch-----------------hhHHHHHHHhccCCeEEEEeC
Q psy7834 282 AEGPYDVIYVGGAVH-----------------HYPFKLMDQLKPGGVMWFTIG 317 (492)
Q Consensus 282 ~~~~fD~i~s~~~~~-----------------~~~~~~~~~L~pgG~l~~~~~ 317 (492)
.++||+|+|+...+ .+..++.++|||||++++.+.
T Consensus 121 -~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 121 -ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp -SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 36899999975422 233578999999999999764
No 444
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.96 E-value=2.9e-09 Score=99.98 Aligned_cols=84 Identities=25% Similarity=0.343 Sum_probs=71.8
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
..+++.+ .+.++++|||+|||+|.++..+++. + .+|+++|+++++++.|+++....++. .+++++++|+.+
T Consensus 81 ~~~~~~~--~~~~~~~vldiG~G~G~~~~~l~~~-~--~~v~~vD~~~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~ 151 (248)
T 2yvl_A 81 FYIALKL--NLNKEKRVLEFGTGSGALLAVLSEV-A--GEVWTFEAVEEFYKTAQKNLKKFNLG----KNVKFFNVDFKD 151 (248)
T ss_dssp HHHHHHT--TCCTTCEEEEECCTTSHHHHHHHHH-S--SEEEEECSCHHHHHHHHHHHHHTTCC----TTEEEECSCTTT
T ss_pred HHHHHhc--CCCCCCEEEEeCCCccHHHHHHHHh-C--CEEEEEecCHHHHHHHHHHHHHcCCC----CcEEEEEcChhh
Confidence 3555555 6778999999999999999999998 3 89999999999999999999887763 689999999988
Q ss_pred CCCCCCcccceec
Q psy7834 124 GYLDEAPYDIIHV 136 (492)
Q Consensus 124 ~~~~~~~~D~i~~ 136 (492)
...+.++||+|++
T Consensus 152 ~~~~~~~~D~v~~ 164 (248)
T 2yvl_A 152 AEVPEGIFHAAFV 164 (248)
T ss_dssp SCCCTTCBSEEEE
T ss_pred cccCCCcccEEEE
Confidence 6535678999987
No 445
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.95 E-value=1.1e-09 Score=106.14 Aligned_cols=102 Identities=14% Similarity=0.138 Sum_probs=67.0
Q ss_pred hhhhHHHHHHHHHHHhc----CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCcc-ccC
Q psy7834 38 FSKFQQAMVLDDLSEEL----TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFV-KDG 112 (492)
Q Consensus 38 ~~~~~~~~~~~~l~~~~----~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~-~~~ 112 (492)
+..++.+.++....... .++.+|||||||+|..+..++...+ .+|+|+|+|+.|++.|+++....+.... ..-
T Consensus 26 ~nn~vks~li~~~~~~~~~~~~~~~~VLDlGCG~G~~l~~~~~~~~--~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~ 103 (302)
T 2vdw_A 26 LSNYVKTLLISMYCSKTFLDDSNKRKVLAIDFGNGADLEKYFYGEI--ALLVATDPDADAIARGNERYNKLNSGIKTKYY 103 (302)
T ss_dssp HHHHHHHHHHHHHTCTTTSSCCSCCEEEETTCTTTTTHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHCC----CCC
T ss_pred HHHHHHHHHHHHHHhhhhhccCCCCeEEEEecCCcHhHHHHHhcCC--CeEEEEECCHHHHHHHHHHHHhcccccccccc
Confidence 44444555554432111 2478999999999987766665432 6999999999999999998765432000 000
Q ss_pred ceEEEecCC------CCC--CCCCCcccceeccCccc
Q psy7834 113 RIKFVLGDG------RKG--YLDEAPYDIIHVGGSIE 141 (492)
Q Consensus 113 ~v~~~~~d~------~~~--~~~~~~~D~i~~~~~~~ 141 (492)
+++|.++|+ .++ ++++++||+|++..+++
T Consensus 104 ~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lh 140 (302)
T 2vdw_A 104 KFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIH 140 (302)
T ss_dssp EEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGG
T ss_pred ccchhhhhcccchhhhhhhccccCCCeeEEEECchHH
Confidence 367888887 322 24567999999866553
No 446
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.95 E-value=2e-09 Score=110.77 Aligned_cols=80 Identities=28% Similarity=0.253 Sum_probs=68.6
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
...++++|||||||+|.++..+++.. ..+|+|+|+|+ |++.|+++++.+++. ++++++++|+++.+++ ++||
T Consensus 155 ~~~~~~~VLDiGcGtG~la~~la~~~--~~~V~gvD~s~-~l~~A~~~~~~~gl~----~~v~~~~~d~~~~~~~-~~fD 226 (480)
T 3b3j_A 155 TDFKDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNNLT----DRIVVIPGKVEEVSLP-EQVD 226 (480)
T ss_dssp GGTTTCEEEEESCSTTHHHHHHHHTT--CSEEEEEECHH-HHHHHHHHHHHTTCT----TTEEEEESCTTTCCCS-SCEE
T ss_pred hhcCCCEEEEecCcccHHHHHHHHcC--CCEEEEEEcHH-HHHHHHHHHHHcCCC----CcEEEEECchhhCccC-CCeE
Confidence 45578899999999999999999853 26999999998 999999999988874 6899999999987654 6899
Q ss_pred ceeccCcc
Q psy7834 133 IIHVGGSI 140 (492)
Q Consensus 133 ~i~~~~~~ 140 (492)
+|+++...
T Consensus 227 ~Ivs~~~~ 234 (480)
T 3b3j_A 227 IIISEPMG 234 (480)
T ss_dssp EEECCCCH
T ss_pred EEEEeCch
Confidence 99997553
No 447
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.95 E-value=1.8e-09 Score=103.05 Aligned_cols=77 Identities=14% Similarity=0.207 Sum_probs=65.0
Q ss_pred hhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCC-CcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEe
Q psy7834 40 KFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGK-TGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVL 118 (492)
Q Consensus 40 ~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~-~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 118 (492)
..+.+++++.+ .+.++.+|||||||+|.++..|++..+. +++|+|+|+|++|++.++++. . .++++++
T Consensus 28 ~~i~~~iv~~~--~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~--------~~v~~i~ 96 (279)
T 3uzu_A 28 HGVIDAIVAAI--RPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-G--------ELLELHA 96 (279)
T ss_dssp HHHHHHHHHHH--CCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-G--------GGEEEEE
T ss_pred HHHHHHHHHhc--CCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-C--------CCcEEEE
Confidence 34477888887 7888999999999999999999998732 234999999999999999883 1 6899999
Q ss_pred cCCCCCCCC
Q psy7834 119 GDGRKGYLD 127 (492)
Q Consensus 119 ~d~~~~~~~ 127 (492)
+|+.+++++
T Consensus 97 ~D~~~~~~~ 105 (279)
T 3uzu_A 97 GDALTFDFG 105 (279)
T ss_dssp SCGGGCCGG
T ss_pred CChhcCChh
Confidence 999988764
No 448
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.94 E-value=2.3e-09 Score=101.66 Aligned_cols=73 Identities=16% Similarity=0.267 Sum_probs=62.7
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccc
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDI 133 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 133 (492)
+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++.. . .++++|+.++++++++||+
T Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~---------~--~~~~~d~~~~~~~~~~fD~ 117 (260)
T 2avn_A 52 LKNPCRVLDLGGGTGKWSLFLQERG---FEVVLVDPSKEMLEVAREKGV---------K--NVVEAKAEDLPFPSGAFEA 117 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHHTC---------S--CEEECCTTSCCSCTTCEEE
T ss_pred cCCCCeEEEeCCCcCHHHHHHHHcC---CeEEEEeCCHHHHHHHHhhcC---------C--CEEECcHHHCCCCCCCEEE
Confidence 3478899999999999999999874 799999999999999998752 1 2899999998888889999
Q ss_pred eeccCcc
Q psy7834 134 IHVGGSI 140 (492)
Q Consensus 134 i~~~~~~ 140 (492)
|++...+
T Consensus 118 v~~~~~~ 124 (260)
T 2avn_A 118 VLALGDV 124 (260)
T ss_dssp EEECSSH
T ss_pred EEEcchh
Confidence 9985543
No 449
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.94 E-value=1.1e-09 Score=104.73 Aligned_cols=85 Identities=20% Similarity=0.122 Sum_probs=72.7
Q ss_pred HHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCC
Q psy7834 47 LDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYL 126 (492)
Q Consensus 47 ~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 126 (492)
...+ .+.++.+|||+|||+|..+..+++..+..++|+|+|+++.+++.++++++..++ .+++++++|+.+.+.
T Consensus 76 ~~~l--~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~-----~~v~~~~~D~~~~~~ 148 (274)
T 3ajd_A 76 PIVL--NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV-----LNTIIINADMRKYKD 148 (274)
T ss_dssp HHHH--CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEESCHHHHHH
T ss_pred HHHh--CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC-----CcEEEEeCChHhcch
Confidence 3445 678899999999999999999999864347999999999999999999999887 689999999987654
Q ss_pred ----CCCcccceeccC
Q psy7834 127 ----DEAPYDIIHVGG 138 (492)
Q Consensus 127 ----~~~~~D~i~~~~ 138 (492)
..++||+|++..
T Consensus 149 ~~~~~~~~fD~Vl~d~ 164 (274)
T 3ajd_A 149 YLLKNEIFFDKILLDA 164 (274)
T ss_dssp HHHHTTCCEEEEEEEE
T ss_pred hhhhccccCCEEEEcC
Confidence 257899999853
No 450
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.93 E-value=3.5e-09 Score=104.23 Aligned_cols=91 Identities=18% Similarity=0.275 Sum_probs=75.3
Q ss_pred HHHHHHHHhc--CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 45 MVLDDLSEEL--TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 45 ~~~~~l~~~~--~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
.+++.+ .. .++.+|||+|||+|.++..+++.. +..+++++|++ .+++.|+++..+.++. ++++++++|+.
T Consensus 154 ~~~~~~--~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~----~~v~~~~~d~~ 225 (335)
T 2r3s_A 154 LIAQLV--NENKIEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVA----SRYHTIAGSAF 225 (335)
T ss_dssp HHHHHH--TC--CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCG----GGEEEEESCTT
T ss_pred HHHHhc--ccccCCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCC----cceEEEecccc
Confidence 444444 44 677899999999999999999986 45799999999 9999999998877763 57999999998
Q ss_pred CCCCCCCcccceeccCcccccc
Q psy7834 123 KGYLDEAPYDIIHVGGSIEDIP 144 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~~~~~~l~ 144 (492)
+.+++. .||+|++...++++.
T Consensus 226 ~~~~~~-~~D~v~~~~~l~~~~ 246 (335)
T 2r3s_A 226 EVDYGN-DYDLVLLPNFLHHFD 246 (335)
T ss_dssp TSCCCS-CEEEEEEESCGGGSC
T ss_pred cCCCCC-CCcEEEEcchhccCC
Confidence 876553 499999988887763
No 451
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.92 E-value=4.4e-09 Score=100.45 Aligned_cols=82 Identities=15% Similarity=0.133 Sum_probs=65.3
Q ss_pred CCCeEEEEcCcC---cHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC-------
Q psy7834 56 EGKKVLDIGSGN---GYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY------- 125 (492)
Q Consensus 56 ~~~~vLDiG~G~---G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~------- 125 (492)
...+|||||||+ |.++..+++.. +..+|+++|+|+.|++.|++++... .+++++++|+.+..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~-p~~~v~~vD~sp~~l~~Ar~~~~~~-------~~v~~~~~D~~~~~~~~~~~~ 148 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVN-PDARVVYVDIDPMVLTHGRALLAKD-------PNTAVFTADVRDPEYILNHPD 148 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHC-TTCEEEEEESSHHHHHHHHHHHTTC-------TTEEEEECCTTCHHHHHHSHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhC-CCCEEEEEECChHHHHHHHHhcCCC-------CCeEEEEeeCCCchhhhccch
Confidence 347999999999 99887777764 5589999999999999999988432 58999999997631
Q ss_pred ----CCCCcccceeccCccccccc
Q psy7834 126 ----LDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 126 ----~~~~~~D~i~~~~~~~~l~~ 145 (492)
++.++||+|++...++++.+
T Consensus 149 ~~~~~d~~~~d~v~~~~vlh~~~d 172 (274)
T 2qe6_A 149 VRRMIDFSRPAAIMLVGMLHYLSP 172 (274)
T ss_dssp HHHHCCTTSCCEEEETTTGGGSCT
T ss_pred hhccCCCCCCEEEEEechhhhCCc
Confidence 23358999999887766543
No 452
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.92 E-value=1.1e-09 Score=107.59 Aligned_cols=77 Identities=21% Similarity=0.197 Sum_probs=65.3
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccC-ceEEEecCCCCCCCC----C
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDG-RIKFVLGDGRKGYLD----E 128 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~-~v~~~~~d~~~~~~~----~ 128 (492)
..++.+|||+|||+|.++..+++.. .+|++||+|+.|++.|+++++.+++. + +++++++|+.+.... .
T Consensus 151 ~~~~~~VLDlgcGtG~~sl~la~~g---a~V~~VD~s~~al~~a~~n~~~~gl~----~~~v~~i~~D~~~~l~~~~~~~ 223 (332)
T 2igt_A 151 ADRPLKVLNLFGYTGVASLVAAAAG---AEVTHVDASKKAIGWAKENQVLAGLE----QAPIRWICEDAMKFIQREERRG 223 (332)
T ss_dssp SSSCCEEEEETCTTCHHHHHHHHTT---CEEEEECSCHHHHHHHHHHHHHHTCT----TSCEEEECSCHHHHHHHHHHHT
T ss_pred cCCCCcEEEcccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCC----ccceEEEECcHHHHHHHHHhcC
Confidence 3467899999999999999999974 59999999999999999999888772 3 499999998775421 4
Q ss_pred Ccccceecc
Q psy7834 129 APYDIIHVG 137 (492)
Q Consensus 129 ~~~D~i~~~ 137 (492)
++||+|+++
T Consensus 224 ~~fD~Ii~d 232 (332)
T 2igt_A 224 STYDIILTD 232 (332)
T ss_dssp CCBSEEEEC
T ss_pred CCceEEEEC
Confidence 689999884
No 453
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.91 E-value=3.9e-09 Score=102.29 Aligned_cols=85 Identities=14% Similarity=0.070 Sum_probs=73.1
Q ss_pred HHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCC
Q psy7834 47 LDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYL 126 (492)
Q Consensus 47 ~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 126 (492)
...+ .+.++.+|||+|||+|..+..+++..+..++|+++|+++.+++.++++++++++ .+++++++|+.++..
T Consensus 95 ~~~l--~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~-----~~v~~~~~D~~~~~~ 167 (309)
T 2b9e_A 95 AMLL--DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV-----SCCELAEEDFLAVSP 167 (309)
T ss_dssp HHHH--CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEECCGGGSCT
T ss_pred HHHh--CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CeEEEEeCChHhcCc
Confidence 3445 678899999999999999999999875568999999999999999999999887 689999999988754
Q ss_pred CC---CcccceeccC
Q psy7834 127 DE---APYDIIHVGG 138 (492)
Q Consensus 127 ~~---~~~D~i~~~~ 138 (492)
.. .+||.|++..
T Consensus 168 ~~~~~~~fD~Vl~D~ 182 (309)
T 2b9e_A 168 SDPRYHEVHYILLDP 182 (309)
T ss_dssp TCGGGTTEEEEEECC
T ss_pred cccccCCCCEEEEcC
Confidence 32 5799998853
No 454
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.90 E-value=6.2e-09 Score=103.70 Aligned_cols=84 Identities=17% Similarity=0.173 Sum_probs=72.6
Q ss_pred CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC--CCCCCccc
Q psy7834 55 TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG--YLDEAPYD 132 (492)
Q Consensus 55 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~D 132 (492)
..+.+|||||||+|.++..+++.. +..+++++|+ +.+++.|++++.+.++. ++++++.+|+.+. +++ ++||
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~p-~~~D 250 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGS----ERIHGHGANLLDRDVPFP-TGFD 250 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTG----GGEEEEECCCCSSSCCCC-CCCS
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcc----cceEEEEccccccCCCCC-CCcC
Confidence 466899999999999999999986 5689999999 99999999999887763 6899999999885 344 7899
Q ss_pred ceeccCccccccc
Q psy7834 133 IIHVGGSIEDIPE 145 (492)
Q Consensus 133 ~i~~~~~~~~l~~ 145 (492)
+|++...++++.+
T Consensus 251 ~v~~~~vlh~~~~ 263 (363)
T 3dp7_A 251 AVWMSQFLDCFSE 263 (363)
T ss_dssp EEEEESCSTTSCH
T ss_pred EEEEechhhhCCH
Confidence 9999888876544
No 455
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.90 E-value=1e-09 Score=103.41 Aligned_cols=80 Identities=16% Similarity=0.151 Sum_probs=63.2
Q ss_pred CCCeEEEEcCcCcHHHHHHHHH--hCCCcEEEEEeCCHHHHHHHHHhhhcC---CCCccccCc-----------------
Q psy7834 56 EGKKVLDIGSGNGYFTALLAWC--VGKTGKVIGIEHIPQLVQRATHNVISG---NPEFVKDGR----------------- 113 (492)
Q Consensus 56 ~~~~vLDiG~G~G~~~~~la~~--~~~~~~v~~vd~~~~~~~~a~~~~~~~---~~~~~~~~~----------------- 113 (492)
++.+|||+|||+|.++..+++. . +..+|+|+|+|+.|++.|++++... ++. .+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~-~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 125 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRR-SLRQVIASDVDPAPLELAAKNLALLSPAGLT----ARELERREQSERFGKPSYL 125 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGG-GEEEEEEEESCHHHHHHHHHHHHTTSHHHHH----HHHHHHHHHHHHHCCHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhcc-CCCeEEEEECCHHHHHHHHHHHHHhhhcccc----ccchhhhhhhhhcccccch
Confidence 5679999999999999999987 3 2379999999999999999988765 431 12
Q ss_pred --------eE-------------EEecCCCCCCC-----CCCcccceeccCcc
Q psy7834 114 --------IK-------------FVLGDGRKGYL-----DEAPYDIIHVGGSI 140 (492)
Q Consensus 114 --------v~-------------~~~~d~~~~~~-----~~~~~D~i~~~~~~ 140 (492)
++ ++++|+.+... ..++||+|+++...
T Consensus 126 ~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~ 178 (250)
T 1o9g_A 126 EAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPY 178 (250)
T ss_dssp HHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCG
T ss_pred hhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCe
Confidence 66 99999887432 34589999986443
No 456
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.90 E-value=1.3e-09 Score=102.44 Aligned_cols=89 Identities=15% Similarity=0.149 Sum_probs=68.4
Q ss_pred hhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEec
Q psy7834 40 KFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLG 119 (492)
Q Consensus 40 ~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 119 (492)
..+.+++++.+ .+.++++|||||||+|.+|. +++ . ...+|+++|++++|++.++++.... ++++++++
T Consensus 7 ~~i~~~iv~~~--~~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~-------~~v~~i~~ 74 (252)
T 1qyr_A 7 QFVIDSIVSAI--NPQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLG-------PKLTIYQQ 74 (252)
T ss_dssp HHHHHHHHHHH--CCCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTG-------GGEEEECS
T ss_pred HHHHHHHHHhc--CCCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccC-------CceEEEEC
Confidence 34478888888 78888999999999999999 754 3 2223999999999999999887441 58999999
Q ss_pred CCCCCCCCC-----CcccceeccCcc
Q psy7834 120 DGRKGYLDE-----APYDIIHVGGSI 140 (492)
Q Consensus 120 d~~~~~~~~-----~~~D~i~~~~~~ 140 (492)
|+.++++++ +..|.|+++...
T Consensus 75 D~~~~~~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 75 DAMTFNFGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp CGGGCCHHHHHHHHTSCEEEEEECCT
T ss_pred chhhCCHHHhhcccCCceEEEECCCC
Confidence 998876542 134567766544
No 457
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.89 E-value=4.7e-09 Score=104.97 Aligned_cols=85 Identities=21% Similarity=0.228 Sum_probs=71.6
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
...++.+|||||||+|.++..+++.. +..+++++|+ +.+++.|+++..+.++. .+++++++|+.+ +++. .||
T Consensus 179 ~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~-~~~~-~~D 250 (374)
T 1qzz_A 179 DWSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLA----DRVTVAEGDFFK-PLPV-TAD 250 (374)
T ss_dssp CCTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCT----TTEEEEECCTTS-CCSC-CEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCC----CceEEEeCCCCC-cCCC-CCC
Confidence 45678899999999999999999986 5579999999 99999999999887773 589999999876 3333 499
Q ss_pred ceeccCccccccc
Q psy7834 133 IIHVGGSIEDIPE 145 (492)
Q Consensus 133 ~i~~~~~~~~l~~ 145 (492)
+|++...++++.+
T Consensus 251 ~v~~~~vl~~~~~ 263 (374)
T 1qzz_A 251 VVLLSFVLLNWSD 263 (374)
T ss_dssp EEEEESCGGGSCH
T ss_pred EEEEeccccCCCH
Confidence 9999888876543
No 458
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.89 E-value=7.6e-09 Score=103.32 Aligned_cols=85 Identities=16% Similarity=0.229 Sum_probs=72.8
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
...++.+|||+|||+|.++..+++.. +..+++++|+ +.+++.|++++.+.++. ++++++.+|+. .+.+. .||
T Consensus 199 ~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~----~~v~~~~~d~~-~~~p~-~~D 270 (369)
T 3gwz_A 199 DFSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLA----DRCEILPGDFF-ETIPD-GAD 270 (369)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCT----TTEEEEECCTT-TCCCS-SCS
T ss_pred CCccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcC----CceEEeccCCC-CCCCC-Cce
Confidence 45667899999999999999999986 5679999999 99999999999887764 78999999998 44544 899
Q ss_pred ceeccCccccccc
Q psy7834 133 IIHVGGSIEDIPE 145 (492)
Q Consensus 133 ~i~~~~~~~~l~~ 145 (492)
+|++...++++.+
T Consensus 271 ~v~~~~vlh~~~d 283 (369)
T 3gwz_A 271 VYLIKHVLHDWDD 283 (369)
T ss_dssp EEEEESCGGGSCH
T ss_pred EEEhhhhhccCCH
Confidence 9999888876554
No 459
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.89 E-value=6.7e-09 Score=103.31 Aligned_cols=91 Identities=19% Similarity=0.199 Sum_probs=75.6
Q ss_pred HHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC
Q psy7834 45 MVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG 124 (492)
Q Consensus 45 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 124 (492)
.+++.+ ...++.+|||||||+|.++..+++.. +..+++++|+ +.+++.|++++.+.++. ++++++.+|+.+.
T Consensus 181 ~l~~~~--~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~ 252 (359)
T 1x19_A 181 LLLEEA--KLDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVA----DRMRGIAVDIYKE 252 (359)
T ss_dssp HHHHHC--CCTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCT----TTEEEEECCTTTS
T ss_pred HHHHhc--CCCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCC----CCEEEEeCccccC
Confidence 444444 45678899999999999999999986 5579999999 99999999999887763 5699999999887
Q ss_pred CCCCCcccceeccCccccccc
Q psy7834 125 YLDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 125 ~~~~~~~D~i~~~~~~~~l~~ 145 (492)
+++. +|+|++...++++.+
T Consensus 253 ~~~~--~D~v~~~~vlh~~~d 271 (359)
T 1x19_A 253 SYPE--ADAVLFCRILYSANE 271 (359)
T ss_dssp CCCC--CSEEEEESCGGGSCH
T ss_pred CCCC--CCEEEEechhccCCH
Confidence 6543 399999988876654
No 460
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.88 E-value=2.6e-09 Score=100.51 Aligned_cols=91 Identities=15% Similarity=0.122 Sum_probs=69.6
Q ss_pred cChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE
Q psy7834 193 SSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV 272 (492)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~ 272 (492)
..+.+.+.+++.+. +.++.+|||||||+|.+|. ++ .. ...+|+|+|+|+.|++.+++++... ++++++
T Consensus 5 ~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~-l~-~~-~~~~v~avEid~~~~~~a~~~~~~~-------~~v~~i 72 (252)
T 1qyr_A 5 NDQFVIDSIVSAIN--PQKGQAMVEIGPGLAALTE-PV-GE-RLDQLTVIELDRDLAARLQTHPFLG-------PKLTIY 72 (252)
T ss_dssp CCHHHHHHHHHHHC--CCTTCCEEEECCTTTTTHH-HH-HT-TCSCEEEECCCHHHHHHHHTCTTTG-------GGEEEE
T ss_pred CCHHHHHHHHHhcC--CCCcCEEEEECCCCcHHHH-hh-hC-CCCeEEEEECCHHHHHHHHHHhccC-------CceEEE
Confidence 45667788888775 6788999999999999999 65 33 4334999999999999999876532 479999
Q ss_pred EccCCCCCcCC-----CCccEEEecCcc
Q psy7834 273 DGDGREGHAAE-----GPYDVIYVGGAV 295 (492)
Q Consensus 273 ~~d~~~~~~~~-----~~fD~i~s~~~~ 295 (492)
++|+.....++ +..|.|++|...
T Consensus 73 ~~D~~~~~~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 73 QQDAMTFNFGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp CSCGGGCCHHHHHHHHTSCEEEEEECCT
T ss_pred ECchhhCCHHHhhcccCCceEEEECCCC
Confidence 99997654321 235788888764
No 461
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.88 E-value=5.4e-09 Score=104.79 Aligned_cols=96 Identities=14% Similarity=0.081 Sum_probs=78.8
Q ss_pred chhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCC------------------------------------
Q psy7834 37 KFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGK------------------------------------ 80 (492)
Q Consensus 37 ~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~------------------------------------ 80 (492)
.....+.+.++.++ ...++..|||.+||+|.+++..|.....
T Consensus 184 pl~e~lAa~ll~l~--~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~ 261 (393)
T 3k0b_A 184 PIKETMAAALVLLT--SWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYD 261 (393)
T ss_dssp SCCHHHHHHHHHHS--CCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTT
T ss_pred CCcHHHHHHHHHHh--CCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhccc
Confidence 34456677777766 6778899999999999999999987521
Q ss_pred -CcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccceeccCc
Q psy7834 81 -TGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDIIHVGGS 139 (492)
Q Consensus 81 -~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~ 139 (492)
..+|+|+|+|+.|++.|++|++.+|+. ++++++++|+.+++.+ ++||+|+++-.
T Consensus 262 ~~~~V~GvDid~~al~~Ar~Na~~~gl~----~~I~~~~~D~~~~~~~-~~fD~Iv~NPP 316 (393)
T 3k0b_A 262 QPLNIIGGDIDARLIEIAKQNAVEAGLG----DLITFRQLQVADFQTE-DEYGVVVANPP 316 (393)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTTCT----TCSEEEECCGGGCCCC-CCSCEEEECCC
T ss_pred CCceEEEEECCHHHHHHHHHHHHHcCCC----CceEEEECChHhCCCC-CCCCEEEECCC
Confidence 146999999999999999999999884 5799999999988754 58999998543
No 462
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.88 E-value=8.7e-10 Score=104.77 Aligned_cols=98 Identities=14% Similarity=0.072 Sum_probs=67.6
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCc--------c-----
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEF--------V----- 109 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~--------~----- 109 (492)
.+.+-+.+.....++++|||||||+|.++..++.... .+|+|+|+|+.|++.|++++++....+ +
T Consensus 42 ~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~--~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~ 119 (263)
T 2a14_A 42 LECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSF--QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEG 119 (263)
T ss_dssp HHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhh--cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCC
Confidence 3344344322345778999999999998887776531 479999999999999998775532100 0
Q ss_pred -----------ccCceE-EEecCCCCC-CC---CCCcccceeccCcccc
Q psy7834 110 -----------KDGRIK-FVLGDGRKG-YL---DEAPYDIIHVGGSIED 142 (492)
Q Consensus 110 -----------~~~~v~-~~~~d~~~~-~~---~~~~~D~i~~~~~~~~ 142 (492)
...+++ ++++|+.+. ++ ..++||+|+++.++++
T Consensus 120 ~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~ 168 (263)
T 2a14_A 120 NSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMEC 168 (263)
T ss_dssp CGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHH
T ss_pred CCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHH
Confidence 001344 999999874 33 2568999999887754
No 463
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.87 E-value=8e-09 Score=103.25 Aligned_cols=78 Identities=13% Similarity=0.009 Sum_probs=67.2
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC-CCC-CCCcc
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK-GYL-DEAPY 131 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~~~ 131 (492)
..++++|||+| |+|.++..+++.. +..+|+++|+++.|++.|+++++++++ .+++++++|+.+ ++. .+++|
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~-~~~~v~~vDi~~~~l~~a~~~~~~~g~-----~~v~~~~~D~~~~l~~~~~~~f 242 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSG-LPKRIAVLDIDERLTKFIEKAANEIGY-----EDIEIFTFDLRKPLPDYALHKF 242 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHT-CCSEEEEECSCHHHHHHHHHHHHHHTC-----CCEEEECCCTTSCCCTTTSSCB
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC-----CCEEEEEChhhhhchhhccCCc
Confidence 34688999999 9999999999874 557999999999999999999988876 589999999988 553 35689
Q ss_pred cceeccC
Q psy7834 132 DIIHVGG 138 (492)
Q Consensus 132 D~i~~~~ 138 (492)
|+|+++.
T Consensus 243 D~Vi~~~ 249 (373)
T 2qm3_A 243 DTFITDP 249 (373)
T ss_dssp SEEEECC
T ss_pred cEEEECC
Confidence 9999854
No 464
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.87 E-value=4.6e-10 Score=105.51 Aligned_cols=84 Identities=23% Similarity=0.255 Sum_probs=70.6
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
.+.+++.+ .+.++.+|||+|||+|.++..+++.. .+|+|+|+|++|++.|+++... . .+++++++|+.
T Consensus 18 ~~~i~~~~--~~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~~--~-----~~v~~~~~D~~ 85 (245)
T 1yub_A 18 LNQIIKQL--NLKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLKL--N-----TRVTLIHQDIL 85 (245)
T ss_dssp HHHHHHHC--CCCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTTT--C-----SEEEECCSCCT
T ss_pred HHHHHHhc--CCCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhcc--C-----CceEEEECChh
Confidence 67788877 67788999999999999999999985 7999999999999999887752 2 68999999999
Q ss_pred CCCCCC-CcccceeccCc
Q psy7834 123 KGYLDE-APYDIIHVGGS 139 (492)
Q Consensus 123 ~~~~~~-~~~D~i~~~~~ 139 (492)
+.+++. ++| .|+++..
T Consensus 86 ~~~~~~~~~f-~vv~n~P 102 (245)
T 1yub_A 86 QFQFPNKQRY-KIVGNIP 102 (245)
T ss_dssp TTTCCCSSEE-EEEEECC
T ss_pred hcCcccCCCc-EEEEeCC
Confidence 987663 678 6666543
No 465
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.87 E-value=3e-09 Score=98.08 Aligned_cols=82 Identities=22% Similarity=0.248 Sum_probs=66.0
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
..+++.+ ...++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++ .++.+.++|+.+
T Consensus 42 ~~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~~~ 105 (227)
T 3e8s_A 42 QAILLAI--LGRQPERVLDLGCGEGWLLRALADRG---IEAVGVDGDRTLVDAARAA-----------GAGEVHLASYAQ 105 (227)
T ss_dssp HHHHHHH--HHTCCSEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHT-----------CSSCEEECCHHH
T ss_pred HHHHHHh--hcCCCCEEEEeCCCCCHHHHHHHHCC---CEEEEEcCCHHHHHHHHHh-----------cccccchhhHHh
Confidence 3456666 55677999999999999999999984 7999999999999999986 246788888777
Q ss_pred C---CCC-CCcccceeccCccc
Q psy7834 124 G---YLD-EAPYDIIHVGGSIE 141 (492)
Q Consensus 124 ~---~~~-~~~~D~i~~~~~~~ 141 (492)
+ +.. ..+||+|+++.+++
T Consensus 106 ~~~~~~~~~~~fD~v~~~~~l~ 127 (227)
T 3e8s_A 106 LAEAKVPVGKDYDLICANFALL 127 (227)
T ss_dssp HHTTCSCCCCCEEEEEEESCCC
T ss_pred hcccccccCCCccEEEECchhh
Confidence 6 443 34599999977765
No 466
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.87 E-value=5.2e-10 Score=105.72 Aligned_cols=81 Identities=23% Similarity=0.225 Sum_probs=66.4
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCH-------HHHHHHHHhhhcCCCCccccCceEEEecCCCCCC
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIP-------QLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY 125 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~-------~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 125 (492)
...++.+|||+|||+|.+++.+|+.. ++|+++|+|+ ++++.|+++.+.+++. ++++++++|+.+..
T Consensus 80 ~~~~~~~VLDlgcG~G~~a~~lA~~g---~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~----~ri~~~~~d~~~~l 152 (258)
T 2r6z_A 80 NHTAHPTVWDATAGLGRDSFVLASLG---LTVTAFEQHPAVACLLSDGIRRALLNPETQDTA----ARINLHFGNAAEQM 152 (258)
T ss_dssp TGGGCCCEEETTCTTCHHHHHHHHTT---CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH----TTEEEEESCHHHHH
T ss_pred CcCCcCeEEEeeCccCHHHHHHHHhC---CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCc----cCeEEEECCHHHHH
Confidence 45567899999999999999999974 7999999999 9999999988776652 45999999988752
Q ss_pred --CCC--CcccceeccCcc
Q psy7834 126 --LDE--APYDIIHVGGSI 140 (492)
Q Consensus 126 --~~~--~~~D~i~~~~~~ 140 (492)
+++ ++||+|+++-..
T Consensus 153 ~~~~~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 153 PALVKTQGKPDIVYLDPMY 171 (258)
T ss_dssp HHHHHHHCCCSEEEECCCC
T ss_pred HhhhccCCCccEEEECCCC
Confidence 233 689999885433
No 467
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.87 E-value=6.2e-09 Score=99.85 Aligned_cols=88 Identities=20% Similarity=0.270 Sum_probs=61.5
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeC-CHHHHHHHHHhh-----hcCCCCccccCceEEEecCCCCCC-
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEH-IPQLVQRATHNV-----ISGNPEFVKDGRIKFVLGDGRKGY- 125 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~-~~~~~~~a~~~~-----~~~~~~~~~~~~v~~~~~d~~~~~- 125 (492)
...++++|||+|||+|.++..+++.. . .+|+++|+ |+.|++.|+++. +.+++......+++++..|..+..
T Consensus 76 ~~~~~~~vLDlG~G~G~~~~~~a~~~-~-~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~ 153 (281)
T 3bzb_A 76 ELIAGKTVCELGAGAGLVSIVAFLAG-A-DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPD 153 (281)
T ss_dssp GGTTTCEEEETTCTTSHHHHHHHHTT-C-SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTH
T ss_pred hhcCCCeEEEecccccHHHHHHHHcC-C-CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccH
Confidence 34678899999999999999999874 1 59999999 899999999998 444430000026888866644321
Q ss_pred -C----CCCcccceeccCcccc
Q psy7834 126 -L----DEAPYDIIHVGGSIED 142 (492)
Q Consensus 126 -~----~~~~~D~i~~~~~~~~ 142 (492)
+ ..++||+|++...+.+
T Consensus 154 ~~~~~~~~~~fD~Ii~~dvl~~ 175 (281)
T 3bzb_A 154 SLQRCTGLQRFQVVLLADLLSF 175 (281)
T ss_dssp HHHHHHSCSSBSEEEEESCCSC
T ss_pred HHHhhccCCCCCEEEEeCcccC
Confidence 1 3578999998666544
No 468
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.87 E-value=4.7e-09 Score=105.07 Aligned_cols=98 Identities=15% Similarity=0.107 Sum_probs=79.3
Q ss_pred cchhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhC------------------------------------
Q psy7834 36 TKFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVG------------------------------------ 79 (492)
Q Consensus 36 ~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~------------------------------------ 79 (492)
..+...+.+.++.++ ...++.+|||.|||+|.+++.+|....
T Consensus 177 Apl~e~lAa~ll~~~--~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~ 254 (385)
T 3ldu_A 177 APIRETLAAGLIYLT--PWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDN 254 (385)
T ss_dssp CCCCHHHHHHHHHTS--CCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCC
T ss_pred CCCcHHHHHHHHHhh--CCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhc
Confidence 334455677777666 677889999999999999999998751
Q ss_pred -CCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccceeccCcc
Q psy7834 80 -KTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDIIHVGGSI 140 (492)
Q Consensus 80 -~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~ 140 (492)
...+|+|+|+++.|++.|++|+..+++. ++++|.++|+.+++.+ ++||+|+++-..
T Consensus 255 ~~~~~V~GvDid~~ai~~Ar~Na~~~gl~----~~i~~~~~D~~~l~~~-~~~D~Iv~NPPy 311 (385)
T 3ldu_A 255 ESKFKIYGYDIDEESIDIARENAEIAGVD----EYIEFNVGDATQFKSE-DEFGFIITNPPY 311 (385)
T ss_dssp SCCCCEEEEESCHHHHHHHHHHHHHHTCG----GGEEEEECCGGGCCCS-CBSCEEEECCCC
T ss_pred cCCceEEEEECCHHHHHHHHHHHHHcCCC----CceEEEECChhhcCcC-CCCcEEEECCCC
Confidence 1157999999999999999999998873 5899999999987654 589999985443
No 469
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.87 E-value=2.7e-09 Score=105.52 Aligned_cols=88 Identities=15% Similarity=0.192 Sum_probs=72.4
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCC
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGR 122 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 122 (492)
.+.+++.+ ...++.+|||+|||+|.++..+++.. +..+|+++|+|+.|++.|+++...+++ +++++++|+.
T Consensus 185 ~~~ll~~l--~~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~------~~~~~~~d~~ 255 (343)
T 2pjd_A 185 SQLLLSTL--TPHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGV------EGEVFASNVF 255 (343)
T ss_dssp HHHHHHHS--CTTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTC------CCEEEECSTT
T ss_pred HHHHHHhc--CcCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCC------CCEEEEcccc
Confidence 34556655 44567799999999999999999985 557999999999999999999988775 3678999987
Q ss_pred CCCCCCCcccceeccCccc
Q psy7834 123 KGYLDEAPYDIIHVGGSIE 141 (492)
Q Consensus 123 ~~~~~~~~~D~i~~~~~~~ 141 (492)
+.+ +++||+|+++..++
T Consensus 256 ~~~--~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 256 SEV--KGRFDMIISNPPFH 272 (343)
T ss_dssp TTC--CSCEEEEEECCCCC
T ss_pred ccc--cCCeeEEEECCCcc
Confidence 653 67899999987665
No 470
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.86 E-value=7.6e-09 Score=103.25 Aligned_cols=96 Identities=14% Similarity=0.025 Sum_probs=79.0
Q ss_pred chhhhHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCC------------------------------------
Q psy7834 37 KFSKFQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGK------------------------------------ 80 (492)
Q Consensus 37 ~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~------------------------------------ 80 (492)
.....+.+.++.+. ...++..+||.+||+|.+++..|.....
T Consensus 177 pl~e~LAaall~l~--~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~ 254 (384)
T 3ldg_A 177 PIKENMAAAIILLS--NWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYD 254 (384)
T ss_dssp CCCHHHHHHHHHHT--TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTT
T ss_pred CCcHHHHHHHHHHh--CCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhcc
Confidence 34456677777766 7778899999999999999999987521
Q ss_pred -CcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccceeccCc
Q psy7834 81 -TGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDIIHVGGS 139 (492)
Q Consensus 81 -~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~ 139 (492)
..+|+|+|+++.|++.|++|++.+|+. ++++++++|+.+++.+ ++||+|+++-.
T Consensus 255 ~~~~v~GvDid~~al~~Ar~Na~~~gl~----~~I~~~~~D~~~l~~~-~~fD~Iv~NPP 309 (384)
T 3ldg_A 255 IQLDISGFDFDGRMVEIARKNAREVGLE----DVVKLKQMRLQDFKTN-KINGVLISNPP 309 (384)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCGGGCCCC-CCSCEEEECCC
T ss_pred CCceEEEEECCHHHHHHHHHHHHHcCCC----CceEEEECChHHCCcc-CCcCEEEECCc
Confidence 146999999999999999999999984 5799999999988754 58999988543
No 471
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.86 E-value=3.4e-09 Score=99.57 Aligned_cols=75 Identities=21% Similarity=0.254 Sum_probs=64.0
Q ss_pred hHHHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecC
Q psy7834 41 FQQAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGD 120 (492)
Q Consensus 41 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 120 (492)
.+.+++++.+ .+.++.+|||+|||+|.++..|++.. ..+|+|+|+|+.|++.++++ .. .+++++++|
T Consensus 18 ~i~~~iv~~~--~~~~~~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~-~~--------~~v~~i~~D 84 (249)
T 3ftd_A 18 GVLKKIAEEL--NIEEGNTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSI-GD--------ERLEVINED 84 (249)
T ss_dssp HHHHHHHHHT--TCCTTCEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTS-CC--------TTEEEECSC
T ss_pred HHHHHHHHhc--CCCCcCEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhc-cC--------CCeEEEEcc
Confidence 3477888877 77789999999999999999999872 27999999999999999987 21 689999999
Q ss_pred CCCCCCCC
Q psy7834 121 GRKGYLDE 128 (492)
Q Consensus 121 ~~~~~~~~ 128 (492)
+.++++++
T Consensus 85 ~~~~~~~~ 92 (249)
T 3ftd_A 85 ASKFPFCS 92 (249)
T ss_dssp TTTCCGGG
T ss_pred hhhCChhH
Confidence 99887653
No 472
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.85 E-value=7.5e-10 Score=116.12 Aligned_cols=78 Identities=26% Similarity=0.327 Sum_probs=63.9
Q ss_pred CeEEEEecCccHHH---HHHHHHhCCCceEEEEeCCHHHHHHHHHhhhhhcCCCCCCceeeeehhhhHHHHHHHhhcccc
Q psy7834 397 AKVLDIGSGSGYLT---ACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFTEMAEKVMQLRVHMMSFT 473 (492)
Q Consensus 397 ~~vld~g~g~G~~~---~~~a~~~g~~~~v~a~d~~~~~~~~a~~~l~~~~~~~~~~~~v~~~~~~~~v~~~~~~~~~~~ 473 (492)
..|+|+|||+|.|. ...+...+...+|+|+|.++ +...+++. +..|+..++|++++|+|+++.
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~-------------v~~N~~~dkVtVI~gd~eev~ 424 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLEN-------------WQFEEWGSQVTVVSSDMREWV 424 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHH-------------HHHHTTGGGEEEEESCTTTCC
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHH-------------HHhccCCCeEEEEeCcceecc
Confidence 46799999999763 33444433344799999997 77777777 556778899999999999999
Q ss_pred cCCCeEEEEeccccc
Q psy7834 474 LEEQSIIILSSFMGR 488 (492)
Q Consensus 474 ~~~~~~~i~~~~~~~ 488 (492)
+|+++|+||||||||
T Consensus 425 LPEKVDIIVSEwMG~ 439 (637)
T 4gqb_A 425 APEKADIIVSELLGS 439 (637)
T ss_dssp CSSCEEEEECCCCBT
T ss_pred CCcccCEEEEEcCcc
Confidence 999999999999997
No 473
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.85 E-value=8.1e-09 Score=102.70 Aligned_cols=90 Identities=23% Similarity=0.240 Sum_probs=73.8
Q ss_pred HHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC
Q psy7834 46 VLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY 125 (492)
Q Consensus 46 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 125 (492)
+++.+ ...++.+|||+|||+|.++..+++.. +..+++++|+ +.+++.|+++..+.++. .+++++++|+.+ +
T Consensus 175 l~~~~--~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~-~ 245 (360)
T 1tw3_A 175 PAAAY--DWTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLS----DRVDVVEGDFFE-P 245 (360)
T ss_dssp HHHHS--CCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCT----TTEEEEECCTTS-C
T ss_pred HHHhC--CCccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCC----CceEEEeCCCCC-C
Confidence 34444 45678899999999999999999986 5579999999 99999999999887773 589999999876 3
Q ss_pred CCCCcccceeccCccccccc
Q psy7834 126 LDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 126 ~~~~~~D~i~~~~~~~~l~~ 145 (492)
++ ..||+|++...++++.+
T Consensus 246 ~~-~~~D~v~~~~vl~~~~~ 264 (360)
T 1tw3_A 246 LP-RKADAIILSFVLLNWPD 264 (360)
T ss_dssp CS-SCEEEEEEESCGGGSCH
T ss_pred CC-CCccEEEEcccccCCCH
Confidence 33 34999999888876543
No 474
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.85 E-value=3.7e-09 Score=101.83 Aligned_cols=98 Identities=14% Similarity=0.112 Sum_probs=65.7
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCC-----------Ccccc
Q psy7834 43 QAMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNP-----------EFVKD 111 (492)
Q Consensus 43 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~-----------~~~~~ 111 (492)
...+.+.+.....++.+|||||||+|.++..++...+ .+|+|+|+|+.|++.|++++.+..- .++.+
T Consensus 58 ~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~ 135 (289)
T 2g72_A 58 LRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHF--EDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEG 135 (289)
T ss_dssp HHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGC--SEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCC--CeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcC
Confidence 4455555522223678999999999996655555333 6999999999999999987643210 00000
Q ss_pred --------------CceEEEecCCCC-CCC-----CCCcccceeccCcccc
Q psy7834 112 --------------GRIKFVLGDGRK-GYL-----DEAPYDIIHVGGSIED 142 (492)
Q Consensus 112 --------------~~v~~~~~d~~~-~~~-----~~~~~D~i~~~~~~~~ 142 (492)
..++++++|+.+ +++ ++++||+|+++.+++.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~ 186 (289)
T 2g72_A 136 KGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEA 186 (289)
T ss_dssp SCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHH
T ss_pred cccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhh
Confidence 025688889987 553 3456999999776643
No 475
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.84 E-value=2.6e-09 Score=103.12 Aligned_cols=87 Identities=15% Similarity=0.102 Sum_probs=63.4
Q ss_pred CCCCeEEEEcCcCcHHHHHHHHHh---CCCcEE--EEEeCCHHHHHHHHHhhhcC-CCCccccCce--EEEecCCCCCC-
Q psy7834 55 TEGKKVLDIGSGNGYFTALLAWCV---GKTGKV--IGIEHIPQLVQRATHNVISG-NPEFVKDGRI--KFVLGDGRKGY- 125 (492)
Q Consensus 55 ~~~~~vLDiG~G~G~~~~~la~~~---~~~~~v--~~vd~~~~~~~~a~~~~~~~-~~~~~~~~~v--~~~~~d~~~~~- 125 (492)
.++.+|||||||+|.++..+++.. .+..+| +++|+|++|++.|++++.+. ++ .++ .+.++++++++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-----~~v~~~~~~~~~~~~~~ 125 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL-----ENVKFAWHKETSSEYQS 125 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC-----TTEEEEEECSCHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC-----CcceEEEEecchhhhhh
Confidence 456799999999998776443321 133544 99999999999999987653 44 444 45566665543
Q ss_pred -----CCCCcccceeccCcccccccc
Q psy7834 126 -----LDEAPYDIIHVGGSIEDIPEG 146 (492)
Q Consensus 126 -----~~~~~~D~i~~~~~~~~l~~~ 146 (492)
+++++||+|++..+++++.+.
T Consensus 126 ~~~~~~~~~~fD~V~~~~~l~~~~d~ 151 (292)
T 2aot_A 126 RMLEKKELQKWDFIHMIQMLYYVKDI 151 (292)
T ss_dssp HHHTTTCCCCEEEEEEESCGGGCSCH
T ss_pred hhccccCCCceeEEEEeeeeeecCCH
Confidence 457899999999999877653
No 476
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.84 E-value=6.6e-09 Score=97.59 Aligned_cols=102 Identities=17% Similarity=0.234 Sum_probs=76.5
Q ss_pred cChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhCCCCCCCCcEEEE
Q psy7834 193 SSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTYYPNLMEGGRVQFV 272 (492)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~ 272 (492)
..+.+...+++.+. +.++.+|||||||+|.+|..++++. ..+|+|+|+|+.|++.++++ . ..+++++
T Consensus 15 ~d~~i~~~iv~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~-~--------~~~v~~i 81 (249)
T 3ftd_A 15 VSEGVLKKIAEELN--IEEGNTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSI-G--------DERLEVI 81 (249)
T ss_dssp ECHHHHHHHHHHTT--CCTTCEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTS-C--------CTTEEEE
T ss_pred CCHHHHHHHHHhcC--CCCcCEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhc-c--------CCCeEEE
Confidence 45667777777765 6678999999999999999999862 46899999999999999876 2 1479999
Q ss_pred EccCCCCCcCC--CCccEEEecCcchhhHHHHHHHhcc
Q psy7834 273 DGDGREGHAAE--GPYDVIYVGGAVHHYPFKLMDQLKP 308 (492)
Q Consensus 273 ~~d~~~~~~~~--~~fD~i~s~~~~~~~~~~~~~~L~p 308 (492)
++|+.....++ +.| .|++|...+--..-+.++|..
T Consensus 82 ~~D~~~~~~~~~~~~~-~vv~NlPy~i~~~il~~ll~~ 118 (249)
T 3ftd_A 82 NEDASKFPFCSLGKEL-KVVGNLPYNVASLIIENTVYN 118 (249)
T ss_dssp CSCTTTCCGGGSCSSE-EEEEECCTTTHHHHHHHHHHT
T ss_pred EcchhhCChhHccCCc-EEEEECchhccHHHHHHHHhc
Confidence 99998765442 233 777777665444455555543
No 477
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.83 E-value=9.6e-09 Score=107.30 Aligned_cols=123 Identities=12% Similarity=0.102 Sum_probs=90.7
Q ss_pred CCcccChHHHHHHHHHHHhccCCCCceEEEeccccHHHHHHHHHhCC-----------------CCeEEEEeCCHHHHHH
Q psy7834 189 GSVMSSPKVHAQALEILKDYLKPGAKVLDIGSGSGYLTACMAHMVGP-----------------TGKVYAVEHIEDLVAQ 251 (492)
Q Consensus 189 ~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-----------------~~~v~giD~s~~~l~~ 251 (492)
|...+.+.+...+++.+. ..++.+|||.+||||.+...+++.... ..+++|+|+++.+++.
T Consensus 149 G~fyTP~~iv~~mv~~l~--p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~l 226 (541)
T 2ar0_A 149 GQYFTPRPLIKTIIHLLK--PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRL 226 (541)
T ss_dssp -CCCCCHHHHHHHHHHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHH
T ss_pred CeeeCCHHHHHHHHHHhc--cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHH
Confidence 455556666667777664 466889999999999999888876422 1369999999999999
Q ss_pred HHHHHHhhCCCCCCCCc-----EEEEEccCCCCC-cCCCCccEEEecCcch--------------------hhHHHHHHH
Q psy7834 252 ANKSMHTYYPNLMEGGR-----VQFVDGDGREGH-AAEGPYDVIYVGGAVH--------------------HYPFKLMDQ 305 (492)
Q Consensus 252 a~~~~~~~~~~~~~~~~-----v~~~~~d~~~~~-~~~~~fD~i~s~~~~~--------------------~~~~~~~~~ 305 (492)
|+.++...+ ..+ +.+.++|..... ...++||+|++|..+. .+...+.+.
T Consensus 227 A~~nl~l~g-----i~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~ 301 (541)
T 2ar0_A 227 ALMNCLLHD-----IEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIET 301 (541)
T ss_dssp HHHHHHTTT-----CCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHhC-----CCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHH
Confidence 999987643 222 678899975432 2346899999986542 123478899
Q ss_pred hccCCeEEEEeCC
Q psy7834 306 LKPGGVMWFTIGN 318 (492)
Q Consensus 306 L~pgG~l~~~~~~ 318 (492)
|+|||++++.++.
T Consensus 302 Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 302 LHPGGRAAVVVPD 314 (541)
T ss_dssp EEEEEEEEEEEEH
T ss_pred hCCCCEEEEEecC
Confidence 9999999987653
No 478
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.83 E-value=5.2e-09 Score=107.53 Aligned_cols=81 Identities=16% Similarity=0.156 Sum_probs=71.3
Q ss_pred hcC--CCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCC-CCC
Q psy7834 53 ELT--EGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYL-DEA 129 (492)
Q Consensus 53 ~~~--~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 129 (492)
.+. ++.+|||+|||+|..|..+|+..+..++|+|+|+++.+++.+++++++.++ .+++++++|+..++. ..+
T Consensus 112 ~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~-----~nv~~~~~D~~~~~~~~~~ 186 (479)
T 2frx_A 112 FADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI-----SNVALTHFDGRVFGAAVPE 186 (479)
T ss_dssp TTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC-----CSEEEECCCSTTHHHHSTT
T ss_pred CcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEeCCHHHhhhhccc
Confidence 556 899999999999999999999875558999999999999999999998887 689999999988654 457
Q ss_pred cccceeccC
Q psy7834 130 PYDIIHVGG 138 (492)
Q Consensus 130 ~~D~i~~~~ 138 (492)
+||.|++..
T Consensus 187 ~fD~Il~D~ 195 (479)
T 2frx_A 187 MFDAILLDA 195 (479)
T ss_dssp CEEEEEEEC
T ss_pred cCCEEEECC
Confidence 899999853
No 479
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.82 E-value=5.3e-09 Score=102.87 Aligned_cols=84 Identities=15% Similarity=0.114 Sum_probs=71.7
Q ss_pred CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccce
Q psy7834 55 TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDII 134 (492)
Q Consensus 55 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i 134 (492)
.++.+|||+|||+|.++..+++.. +..+++++|+ +.+++.|++++.+.++. ++++|+.+|+. .+.+. +||+|
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~----~~v~~~~~d~~-~~~p~-~~D~v 239 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGLS----GRAQVVVGSFF-DPLPA-GAGGY 239 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCT----TTEEEEECCTT-SCCCC-SCSEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCcC----cCeEEecCCCC-CCCCC-CCcEE
Confidence 446799999999999999999986 5579999999 99999999999887763 68999999997 34444 89999
Q ss_pred eccCcccccccc
Q psy7834 135 HVGGSIEDIPEG 146 (492)
Q Consensus 135 ~~~~~~~~l~~~ 146 (492)
++...++++.+.
T Consensus 240 ~~~~vlh~~~~~ 251 (332)
T 3i53_A 240 VLSAVLHDWDDL 251 (332)
T ss_dssp EEESCGGGSCHH
T ss_pred EEehhhccCCHH
Confidence 999888876553
No 480
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.82 E-value=3.6e-09 Score=100.19 Aligned_cols=85 Identities=18% Similarity=0.146 Sum_probs=65.2
Q ss_pred CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCcc------------------------c
Q psy7834 55 TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFV------------------------K 110 (492)
Q Consensus 55 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~------------------------~ 110 (492)
.++.+|||+|||+|.++..+++.. . .+|+|+|+|+.|++.|+++....+..+- .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACES-F-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGT-E-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcc-c-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 567899999999999999999875 2 4999999999999999998765320000 0
Q ss_pred cCce-EEEecCCCCCCC-CC---CcccceeccCccc
Q psy7834 111 DGRI-KFVLGDGRKGYL-DE---APYDIIHVGGSIE 141 (492)
Q Consensus 111 ~~~v-~~~~~d~~~~~~-~~---~~~D~i~~~~~~~ 141 (492)
..++ +++++|+.+... ++ ++||+|++..+++
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~ 168 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLD 168 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHH
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhh
Confidence 0127 999999988643 45 7899999976664
No 481
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.82 E-value=1e-08 Score=101.59 Aligned_cols=87 Identities=13% Similarity=0.172 Sum_probs=73.6
Q ss_pred hcCC-CCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCC-CCCc
Q psy7834 53 ELTE-GKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYL-DEAP 130 (492)
Q Consensus 53 ~~~~-~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~ 130 (492)
+..+ +.+|||||||+|.++..+++.. +..+++++|+ +.+++.|+++..+.++. ++++++.+|+.+.+. ..+.
T Consensus 175 ~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~ 248 (352)
T 3mcz_A 175 GVFARARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHDLG----GRVEFFEKNLLDARNFEGGA 248 (352)
T ss_dssp GGGTTCCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCG----GGEEEEECCTTCGGGGTTCC
T ss_pred CCcCCCCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcCCC----CceEEEeCCcccCcccCCCC
Confidence 4455 7899999999999999999986 5589999999 88999999998887763 679999999988651 3466
Q ss_pred ccceeccCccccccc
Q psy7834 131 YDIIHVGGSIEDIPE 145 (492)
Q Consensus 131 ~D~i~~~~~~~~l~~ 145 (492)
||+|++...++++.+
T Consensus 249 ~D~v~~~~vlh~~~~ 263 (352)
T 3mcz_A 249 ADVVMLNDCLHYFDA 263 (352)
T ss_dssp EEEEEEESCGGGSCH
T ss_pred ccEEEEecccccCCH
Confidence 999999988887654
No 482
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.81 E-value=8.7e-09 Score=101.42 Aligned_cols=74 Identities=19% Similarity=0.213 Sum_probs=65.3
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
.+.++.+|||+|||+|.++.. ++.. .+|+|+|+|+.+++.|+++++.+++. ++++++++|+.+.. ++||
T Consensus 192 ~~~~~~~VLDlg~G~G~~~l~-a~~~---~~V~~vD~s~~ai~~a~~n~~~n~l~----~~v~~~~~D~~~~~---~~fD 260 (336)
T 2yx1_A 192 KVSLNDVVVDMFAGVGPFSIA-CKNA---KKIYAIDINPHAIELLKKNIKLNKLE----HKIIPILSDVREVD---VKGN 260 (336)
T ss_dssp HCCTTCEEEETTCTTSHHHHH-TTTS---SEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCGGGCC---CCEE
T ss_pred hcCCCCEEEEccCccCHHHHh-ccCC---CEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEECChHHhc---CCCc
Confidence 445889999999999999999 8732 79999999999999999999998874 58999999998875 7899
Q ss_pred ceecc
Q psy7834 133 IIHVG 137 (492)
Q Consensus 133 ~i~~~ 137 (492)
+|+++
T Consensus 261 ~Vi~d 265 (336)
T 2yx1_A 261 RVIMN 265 (336)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99874
No 483
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.81 E-value=7.5e-09 Score=101.86 Aligned_cols=84 Identities=20% Similarity=0.265 Sum_probs=70.3
Q ss_pred hcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCccc
Q psy7834 53 ELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYD 132 (492)
Q Consensus 53 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 132 (492)
...+ .+|||+|||+|.++..+++.. +..+++++|+ +.+++.|+++..+.++. ++++++.+|..+ +++ ++||
T Consensus 165 ~~~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~-~~~-~~~D 235 (334)
T 2ip2_A 165 DFRG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLAG----ERVSLVGGDMLQ-EVP-SNGD 235 (334)
T ss_dssp CCTT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHHT----TSEEEEESCTTT-CCC-SSCS
T ss_pred CCCC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCCC----CcEEEecCCCCC-CCC-CCCC
Confidence 3445 899999999999999999986 5579999999 99999999988765542 589999999987 454 6799
Q ss_pred ceeccCccccccc
Q psy7834 133 IIHVGGSIEDIPE 145 (492)
Q Consensus 133 ~i~~~~~~~~l~~ 145 (492)
+|++...++++.+
T Consensus 236 ~v~~~~vl~~~~~ 248 (334)
T 2ip2_A 236 IYLLSRIIGDLDE 248 (334)
T ss_dssp EEEEESCGGGCCH
T ss_pred EEEEchhccCCCH
Confidence 9999888876544
No 484
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.80 E-value=4.6e-09 Score=105.32 Aligned_cols=77 Identities=17% Similarity=0.133 Sum_probs=65.0
Q ss_pred CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccC-ceEEEecCCCCCCC----CCC
Q psy7834 55 TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDG-RIKFVLGDGRKGYL----DEA 129 (492)
Q Consensus 55 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~-~v~~~~~d~~~~~~----~~~ 129 (492)
.++++|||+|||||.++..+|+... .+|+++|+|+.|++.|++|++.+++. . +++++++|+.+... ...
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga--~~V~~vD~s~~al~~A~~N~~~n~~~----~~~v~~~~~D~~~~l~~~~~~~~ 284 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGA--MATTSVDLAKRSRALSLAHFEANHLD----MANHQLVVMDVFDYFKYARRHHL 284 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTB--SEEEEEESCTTHHHHHHHHHHHTTCC----CTTEEEEESCHHHHHHHHHHTTC
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCC----ccceEEEECCHHHHHHHHHHhCC
Confidence 5788999999999999999998631 58999999999999999999998872 3 89999999876321 235
Q ss_pred cccceecc
Q psy7834 130 PYDIIHVG 137 (492)
Q Consensus 130 ~~D~i~~~ 137 (492)
+||+|++.
T Consensus 285 ~fD~Ii~D 292 (385)
T 2b78_A 285 TYDIIIID 292 (385)
T ss_dssp CEEEEEEC
T ss_pred CccEEEEC
Confidence 89999873
No 485
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.80 E-value=6.4e-09 Score=96.07 Aligned_cols=84 Identities=30% Similarity=0.461 Sum_probs=67.9
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCC
Q psy7834 44 AMVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRK 123 (492)
Q Consensus 44 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 123 (492)
..+++.+ . .++.+|||+|||+|.++..+++. + .+++++|+++.+++.++++. .+++++|+.+
T Consensus 23 ~~l~~~~--~-~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~~~~~~~~~~~------------~~~~~~d~~~ 84 (230)
T 3cc8_A 23 PNLLKHI--K-KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFPEAAEQAKEKL------------DHVVLGDIET 84 (230)
T ss_dssp HHHHTTC--C-TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSHHHHHHHHTTS------------SEEEESCTTT
T ss_pred HHHHHHh--c-cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhC------------CcEEEcchhh
Confidence 4455544 2 57889999999999999999998 4 89999999999999998754 2688999876
Q ss_pred --CCCCCCcccceeccCccccccc
Q psy7834 124 --GYLDEAPYDIIHVGGSIEDIPE 145 (492)
Q Consensus 124 --~~~~~~~~D~i~~~~~~~~l~~ 145 (492)
.++++++||+|++..+++++.+
T Consensus 85 ~~~~~~~~~fD~v~~~~~l~~~~~ 108 (230)
T 3cc8_A 85 MDMPYEEEQFDCVIFGDVLEHLFD 108 (230)
T ss_dssp CCCCSCTTCEEEEEEESCGGGSSC
T ss_pred cCCCCCCCccCEEEECChhhhcCC
Confidence 4556789999999888776543
No 486
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.80 E-value=7.8e-09 Score=94.67 Aligned_cols=81 Identities=16% Similarity=0.054 Sum_probs=70.1
Q ss_pred CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccce
Q psy7834 55 TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDII 134 (492)
Q Consensus 55 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i 134 (492)
.++.+|||||||+|.++..+. +..+++|+||++.|++.+++++..++ .+..+.++|....+++ ++||+|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g------~~~~~~v~D~~~~~~~-~~~Dvv 172 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKD------WDFTFALQDVLCAPPA-EAGDLA 172 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTT------CEEEEEECCTTTSCCC-CBCSEE
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcC------CCceEEEeecccCCCC-CCcchH
Confidence 467899999999999999888 23899999999999999999987776 4789999999887765 589999
Q ss_pred eccCcccccccc
Q psy7834 135 HVGGSIEDIPEG 146 (492)
Q Consensus 135 ~~~~~~~~l~~~ 146 (492)
++.-.++.+.++
T Consensus 173 Lllk~lh~LE~q 184 (253)
T 3frh_A 173 LIFKLLPLLERE 184 (253)
T ss_dssp EEESCHHHHHHH
T ss_pred HHHHHHHHhhhh
Confidence 999888877665
No 487
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.80 E-value=1.7e-08 Score=103.45 Aligned_cols=84 Identities=21% Similarity=0.184 Sum_probs=72.7
Q ss_pred HHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC-
Q psy7834 47 LDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY- 125 (492)
Q Consensus 47 ~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~- 125 (492)
...+ .+.++.+|||+|||+|..+..+++..+..++|+++|+++.+++.++++++..++ .+++++++|+.+.+
T Consensus 252 ~~~l--~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~-----~~v~~~~~D~~~~~~ 324 (450)
T 2yxl_A 252 SIVL--DPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI-----KIVKPLVKDARKAPE 324 (450)
T ss_dssp HHHH--CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC-----CSEEEECSCTTCCSS
T ss_pred HHhc--CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC-----CcEEEEEcChhhcch
Confidence 4444 678899999999999999999999874447999999999999999999998887 68999999998876
Q ss_pred -CCCCcccceecc
Q psy7834 126 -LDEAPYDIIHVG 137 (492)
Q Consensus 126 -~~~~~~D~i~~~ 137 (492)
+++++||+|++.
T Consensus 325 ~~~~~~fD~Vl~D 337 (450)
T 2yxl_A 325 IIGEEVADKVLLD 337 (450)
T ss_dssp SSCSSCEEEEEEE
T ss_pred hhccCCCCEEEEc
Confidence 344789999974
No 488
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.79 E-value=3.8e-09 Score=107.52 Aligned_cols=86 Identities=20% Similarity=0.106 Sum_probs=73.4
Q ss_pred HHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC
Q psy7834 45 MVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG 124 (492)
Q Consensus 45 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 124 (492)
.+...+ .+.++.+|||+|||+|..+..+|+..+..++|+|+|+|+.+++.+++++++.|+ . +.++++|+.++
T Consensus 92 l~a~~L--~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~-----~-v~~~~~Da~~l 163 (464)
T 3m6w_A 92 AVGVLL--DPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA-----P-LAVTQAPPRAL 163 (464)
T ss_dssp HHHHHH--CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC-----C-CEEECSCHHHH
T ss_pred HHHHhc--CcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----e-EEEEECCHHHh
Confidence 334455 678899999999999999999999875558999999999999999999999887 6 99999998876
Q ss_pred CC-CCCcccceeccC
Q psy7834 125 YL-DEAPYDIIHVGG 138 (492)
Q Consensus 125 ~~-~~~~~D~i~~~~ 138 (492)
+. ..++||+|+++.
T Consensus 164 ~~~~~~~FD~Il~D~ 178 (464)
T 3m6w_A 164 AEAFGTYFHRVLLDA 178 (464)
T ss_dssp HHHHCSCEEEEEEEC
T ss_pred hhhccccCCEEEECC
Confidence 52 357899999753
No 489
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.79 E-value=2.7e-09 Score=106.60 Aligned_cols=74 Identities=27% Similarity=0.203 Sum_probs=64.6
Q ss_pred CCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcC--CCCccccCceEEEecCCCCC-CC-CCCcc
Q psy7834 56 EGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISG--NPEFVKDGRIKFVLGDGRKG-YL-DEAPY 131 (492)
Q Consensus 56 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~--~~~~~~~~~v~~~~~d~~~~-~~-~~~~~ 131 (492)
+|.+|||+|||+|..+..+++.. .+|+++|+|+.|++.|++|++.+ ++ .+++++++|+.+. +. ..++|
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g---~~V~~VD~s~~~l~~Ar~N~~~~~~gl-----~~i~~i~~Da~~~L~~~~~~~f 164 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKA---SQGIYIERNDETAVAARHNIPLLLNEG-----KDVNILTGDFKEYLPLIKTFHP 164 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTC---SEEEEEESCHHHHHHHHHHHHHHSCTT-----CEEEEEESCGGGSHHHHHHHCC
T ss_pred CCCEEEEeCCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHhHHHhccCC-----CcEEEEECcHHHhhhhccCCCc
Confidence 48999999999999999999885 79999999999999999999876 76 6899999999875 21 23589
Q ss_pred cceecc
Q psy7834 132 DIIHVG 137 (492)
Q Consensus 132 D~i~~~ 137 (492)
|+|+++
T Consensus 165 DvV~lD 170 (410)
T 3ll7_A 165 DYIYVD 170 (410)
T ss_dssp SEEEEC
T ss_pred eEEEEC
Confidence 999885
No 490
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.78 E-value=1.4e-08 Score=101.34 Aligned_cols=104 Identities=20% Similarity=0.230 Sum_probs=77.8
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhh--CCCCCCCCcEEEEEccCCCCCc--CCC
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIEDLVAQANKSMHTY--YPNLMEGGRVQFVDGDGREGHA--AEG 284 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~--~~~~~~~~~v~~~~~d~~~~~~--~~~ 284 (492)
+.+|.+|||+|||+|..+..+++.. ++|+++|+|+.|++.|++|++.+ + ..+++++++|+.+... ..+
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~g---~~V~~VD~s~~~l~~Ar~N~~~~~~g-----l~~i~~i~~Da~~~L~~~~~~ 162 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSKA---SQGIYIERNDETAVAARHNIPLLLNE-----GKDVNILTGDFKEYLPLIKTF 162 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTTC---SEEEEEESCHHHHHHHHHHHHHHSCT-----TCEEEEEESCGGGSHHHHHHH
T ss_pred cCCCCEEEEeCCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHhHHHhccC-----CCcEEEEECcHHHhhhhccCC
Confidence 4558999999999999999998763 48999999999999999999875 4 2579999999876422 235
Q ss_pred CccEEEecCcchh--------h----H--HHHHHHhc-cCCeEEEEeCCCc
Q psy7834 285 PYDVIYVGGAVHH--------Y----P--FKLMDQLK-PGGVMWFTIGNAE 320 (492)
Q Consensus 285 ~fD~i~s~~~~~~--------~----~--~~~~~~L~-pgG~l~~~~~~~~ 320 (492)
+||+|+++..... + | .++.+.|. .+..+++.+.|.-
T Consensus 163 ~fDvV~lDPPrr~~~~grv~~led~~P~l~~~~~~l~~~~~~~~vK~sP~l 213 (410)
T 3ll7_A 163 HPDYIYVDPARRSGADKRVYAIADCEPDLIPLATELLPFCSSILAKLSPMI 213 (410)
T ss_dssp CCSEEEECCEEC-----CCCCGGGEESCHHHHHHHHGGGSSEEEEEECTTS
T ss_pred CceEEEECCCCcCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEEEcCCCC
Confidence 8999999754321 1 1 25666554 4556777776643
No 491
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.78 E-value=4.7e-09 Score=106.72 Aligned_cols=88 Identities=18% Similarity=0.103 Sum_probs=74.6
Q ss_pred HHHHHHHHhcCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCC
Q psy7834 45 MVLDDLSEELTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKG 124 (492)
Q Consensus 45 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 124 (492)
.+...+ .+.++.+|||+|||+|..|..+|+..+..++|+++|+++.+++.+++++++.|+ .++.++++|+.++
T Consensus 96 l~~~~L--~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~-----~nv~v~~~Da~~l 168 (456)
T 3m4x_A 96 IVGTAA--AAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV-----SNAIVTNHAPAEL 168 (456)
T ss_dssp HHHHHH--CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC-----SSEEEECCCHHHH
T ss_pred HHHHHc--CCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CceEEEeCCHHHh
Confidence 334455 678899999999999999999999875557999999999999999999999888 6899999998876
Q ss_pred CC-CCCcccceeccCc
Q psy7834 125 YL-DEAPYDIIHVGGS 139 (492)
Q Consensus 125 ~~-~~~~~D~i~~~~~ 139 (492)
.. ..++||+|+++..
T Consensus 169 ~~~~~~~FD~Il~DaP 184 (456)
T 3m4x_A 169 VPHFSGFFDRIVVDAP 184 (456)
T ss_dssp HHHHTTCEEEEEEECC
T ss_pred hhhccccCCEEEECCC
Confidence 42 3578999998543
No 492
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.78 E-value=1.8e-08 Score=97.22 Aligned_cols=74 Identities=16% Similarity=0.147 Sum_probs=62.3
Q ss_pred CeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC--CCCCccccee
Q psy7834 58 KKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY--LDEAPYDIIH 135 (492)
Q Consensus 58 ~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~D~i~ 135 (492)
.+|||||||+|.++..+++.. +..+|++||+++.|++.|++++....- ++++++++|+.+.. .++++||+|+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~~~-----~rv~v~~~Da~~~l~~~~~~~fDvIi 164 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIPRA-----PRVKIRVDDARMVAESFTPASRDVII 164 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCCCT-----TTEEEEESCHHHHHHTCCTTCEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhccccCC-----CceEEEECcHHHHHhhccCCCCCEEE
Confidence 399999999999999999975 447999999999999999999865322 68999999987753 2457899998
Q ss_pred cc
Q psy7834 136 VG 137 (492)
Q Consensus 136 ~~ 137 (492)
+.
T Consensus 165 ~D 166 (317)
T 3gjy_A 165 RD 166 (317)
T ss_dssp EC
T ss_pred EC
Confidence 84
No 493
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.76 E-value=1.2e-08 Score=95.99 Aligned_cols=99 Identities=17% Similarity=0.152 Sum_probs=69.0
Q ss_pred hhHHHHHHHHHHHhcC-CCCeEEEEcCcC--cHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEE
Q psy7834 40 KFQQAMVLDDLSEELT-EGKKVLDIGSGN--GYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKF 116 (492)
Q Consensus 40 ~~~~~~~~~~l~~~~~-~~~~vLDiG~G~--G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 116 (492)
+....+++.+| ... ...+|||||||+ +.++..+++...+.++|++||.|+.|++.|++++...+. .+++|
T Consensus 63 r~fl~rav~~l--~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~-----~~~~~ 135 (277)
T 3giw_A 63 RDWMNRAVAHL--AKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPE-----GRTAY 135 (277)
T ss_dssp HHHHHHHHHHH--HHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSS-----SEEEE
T ss_pred HHHHHHHHHHh--ccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCC-----CcEEE
Confidence 33344555555 222 336899999997 445566666555679999999999999999998866432 57999
Q ss_pred EecCCCCCCC----C--CCccc-----ceeccCccccccc
Q psy7834 117 VLGDGRKGYL----D--EAPYD-----IIHVGGSIEDIPE 145 (492)
Q Consensus 117 ~~~d~~~~~~----~--~~~~D-----~i~~~~~~~~l~~ 145 (492)
+++|+.+... + .+.|| .|+++..+|.+.+
T Consensus 136 v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d 175 (277)
T 3giw_A 136 VEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLD 175 (277)
T ss_dssp EECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCG
T ss_pred EEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCc
Confidence 9999987521 1 24455 4777777766544
No 494
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.76 E-value=9.8e-09 Score=90.54 Aligned_cols=72 Identities=18% Similarity=0.396 Sum_probs=60.6
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC--------
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY-------- 125 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-------- 125 (492)
+.++.+|||+|||+|.++..+++..++..+++++|+++ |++. .+++++++|+.+.+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------------~~~~~~~~d~~~~~~~~~~~~~ 83 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------------VGVDFLQGDFRDELVMKALLER 83 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------------TTEEEEESCTTSHHHHHHHHHH
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------------CcEEEEEcccccchhhhhhhcc
Confidence 56788999999999999999999865558999999999 7521 47899999998876
Q ss_pred CCCCcccceeccCccc
Q psy7834 126 LDEAPYDIIHVGGSIE 141 (492)
Q Consensus 126 ~~~~~~D~i~~~~~~~ 141 (492)
+++++||+|+++..++
T Consensus 84 ~~~~~~D~i~~~~~~~ 99 (180)
T 1ej0_A 84 VGDSKVQVVMSDMAPN 99 (180)
T ss_dssp HTTCCEEEEEECCCCC
T ss_pred CCCCceeEEEECCCcc
Confidence 6678999999976654
No 495
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.75 E-value=1.4e-08 Score=97.72 Aligned_cols=82 Identities=22% Similarity=0.256 Sum_probs=63.6
Q ss_pred CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC-CCCCcccc
Q psy7834 55 TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY-LDEAPYDI 133 (492)
Q Consensus 55 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~ 133 (492)
.++++|||||||+|..+..+++.. +..+|++||+|+.+++.|++++...+..-+..++++++++|+.+.. ...++||+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 456899999999999999999874 4479999999999999999987643100011258999999987753 24678999
Q ss_pred eecc
Q psy7834 134 IHVG 137 (492)
Q Consensus 134 i~~~ 137 (492)
|++.
T Consensus 161 Ii~D 164 (294)
T 3adn_A 161 IISD 164 (294)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9884
No 496
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.74 E-value=2.7e-09 Score=100.80 Aligned_cols=82 Identities=21% Similarity=0.202 Sum_probs=63.9
Q ss_pred cCCCCceEEEeccccHHHHHHHHHhCCCCeEEEEeCCH-------HHHHHHHHHHHhhCCCCCCCCcEEEEEccCCCCCc
Q psy7834 209 LKPGAKVLDIGSGSGYLTACMAHMVGPTGKVYAVEHIE-------DLVAQANKSMHTYYPNLMEGGRVQFVDGDGREGHA 281 (492)
Q Consensus 209 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~giD~s~-------~~l~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 281 (492)
+.++.+|||+|||+|.++..+|+.. ++|+|+|+|+ ++++.|++|+..++ ...+++++++|+.+...
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~g---~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~----~~~ri~~~~~d~~~~l~ 153 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASLG---LTVTAFEQHPAVACLLSDGIRRALLNPETQD----TAARINLHFGNAAEQMP 153 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHTT---CCEEEEECCHHHHHHHHHHHHHHHHSHHHHH----HHTTEEEEESCHHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHhC---CEEEEEECChhhhHHHHHHHHHHHhHHHhhC----CccCeEEEECCHHHHHH
Confidence 4567899999999999999999863 4799999999 99999998876543 11359999999865322
Q ss_pred --CC--CCccEEEecCcchh
Q psy7834 282 --AE--GPYDVIYVGGAVHH 297 (492)
Q Consensus 282 --~~--~~fD~i~s~~~~~~ 297 (492)
++ ++||+|+++..+++
T Consensus 154 ~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 154 ALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHCCCSEEEECCCC--
T ss_pred hhhccCCCccEEEECCCCCC
Confidence 22 68999999876644
No 497
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.73 E-value=9.4e-09 Score=103.61 Aligned_cols=77 Identities=22% Similarity=0.208 Sum_probs=65.7
Q ss_pred CCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCC-CccccCceEEEecCCCCCCCC----CC
Q psy7834 55 TEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNP-EFVKDGRIKFVLGDGRKGYLD----EA 129 (492)
Q Consensus 55 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~-~~~~~~~v~~~~~d~~~~~~~----~~ 129 (492)
.++++|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|+++++.+++ . ++++++++|+.+.... ..
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~----~~v~~~~~D~~~~~~~~~~~~~ 292 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDL----SKAEFVRDDVFKLLRTYRDRGE 292 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCG----GGEEEEESCHHHHHHHHHHTTC
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCc----cceEEEECCHHHHHHHHHhcCC
Confidence 578899999999999999999973 16999999999999999999998876 3 4899999998775321 46
Q ss_pred cccceecc
Q psy7834 130 PYDIIHVG 137 (492)
Q Consensus 130 ~~D~i~~~ 137 (492)
+||+|+++
T Consensus 293 ~fD~Ii~d 300 (396)
T 3c0k_A 293 KFDVIVMD 300 (396)
T ss_dssp CEEEEEEC
T ss_pred CCCEEEEC
Confidence 89999873
No 498
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.73 E-value=1.4e-08 Score=96.95 Aligned_cols=88 Identities=16% Similarity=0.111 Sum_probs=59.6
Q ss_pred HHHHHHHHhcC-CCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceE-EEecCCC
Q psy7834 45 MVLDDLSEELT-EGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIK-FVLGDGR 122 (492)
Q Consensus 45 ~~~~~l~~~~~-~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~-~~~~d~~ 122 (492)
.+++.+ .+. ++.+|||+|||||.++..+++... ++|+|||++++|++.+.++. +++. +...|+.
T Consensus 75 ~~l~~~--~~~~~g~~vLDiGcGTG~~t~~L~~~ga--~~V~aVDvs~~mL~~a~r~~----------~rv~~~~~~ni~ 140 (291)
T 3hp7_A 75 KALAVF--NLSVEDMITIDIGASTGGFTDVMLQNGA--KLVYAVDVGTNQLVWKLRQD----------DRVRSMEQYNFR 140 (291)
T ss_dssp HHHHHT--TCCCTTCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSSSCSCHHHHTC----------TTEEEECSCCGG
T ss_pred HHHHhc--CCCccccEEEecCCCccHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhC----------cccceecccCce
Confidence 444544 333 578999999999999999998742 69999999999998855432 2332 2233443
Q ss_pred CCC---CCCCcccceeccCcccccccc
Q psy7834 123 KGY---LDEAPYDIIHVGGSIEDIPEG 146 (492)
Q Consensus 123 ~~~---~~~~~~D~i~~~~~~~~l~~~ 146 (492)
.+. ++..+||+|++..++..+...
T Consensus 141 ~l~~~~l~~~~fD~v~~d~sf~sl~~v 167 (291)
T 3hp7_A 141 YAEPVDFTEGLPSFASIDVSFISLNLI 167 (291)
T ss_dssp GCCGGGCTTCCCSEEEECCSSSCGGGT
T ss_pred ecchhhCCCCCCCEEEEEeeHhhHHHH
Confidence 332 233459999998877655433
No 499
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.72 E-value=3.2e-08 Score=89.62 Aligned_cols=71 Identities=25% Similarity=0.351 Sum_probs=56.9
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCC-CcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCC-------
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGK-TGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGY------- 125 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~-~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~------- 125 (492)
+.++.+|||+|||+|.++..+++..++ .++|+|+|+|+.+ .. .+++++++|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-----~~v~~~~~d~~~~~~~~~~~~ 83 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-----PNVYFIQGEIGKDNMNNIKNI 83 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-----TTCEEEECCTTTTSSCCC---
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-----CCceEEEccccchhhhhhccc
Confidence 567889999999999999999998742 5899999999831 12 57899999998875
Q ss_pred ------------------CCCCcccceeccCcc
Q psy7834 126 ------------------LDEAPYDIIHVGGSI 140 (492)
Q Consensus 126 ------------------~~~~~~D~i~~~~~~ 140 (492)
+++++||+|+++...
T Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~ 116 (201)
T 2plw_A 84 NYIDNMNNNSVDYKLKEILQDKKIDIILSDAAV 116 (201)
T ss_dssp --------CHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred cccccccchhhHHHHHhhcCCCcccEEEeCCCc
Confidence 455688998886544
No 500
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.72 E-value=6.5e-09 Score=96.06 Aligned_cols=85 Identities=13% Similarity=0.033 Sum_probs=73.9
Q ss_pred cCCCCeEEEEcCcCcHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhhhcCCCCccccCceEEEecCCCCCCCCCCcccc
Q psy7834 54 LTEGKKVLDIGSGNGYFTALLAWCVGKTGKVIGIEHIPQLVQRATHNVISGNPEFVKDGRIKFVLGDGRKGYLDEAPYDI 133 (492)
Q Consensus 54 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 133 (492)
+.+..+|||||||+|-++..++... +..+++++|+++.|++.+++++..+|+ +.++.++|....+ +..+||+
T Consensus 130 i~~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~------~~~~~v~D~~~~~-p~~~~Dv 201 (281)
T 3lcv_B 130 LPRPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNV------PHRTNVADLLEDR-LDEPADV 201 (281)
T ss_dssp SCCCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTC------CEEEEECCTTTSC-CCSCCSE
T ss_pred cCCCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCC------CceEEEeeecccC-CCCCcch
Confidence 3457799999999999999999874 668999999999999999999998886 4899999977655 4578999
Q ss_pred eeccCcccccccc
Q psy7834 134 IHVGGSIEDIPEG 146 (492)
Q Consensus 134 i~~~~~~~~l~~~ 146 (492)
+++.-.++.+.++
T Consensus 202 aL~lkti~~Le~q 214 (281)
T 3lcv_B 202 TLLLKTLPCLETQ 214 (281)
T ss_dssp EEETTCHHHHHHH
T ss_pred HHHHHHHHHhhhh
Confidence 9999999887776
Done!