Query psy7835
Match_columns 205
No_of_seqs 135 out of 303
Neff 5.1
Searched_HMMs 29240
Date Fri Aug 16 20:06:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7835.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7835hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ixz_B Potassium-transporting 100.0 4.9E-66 1.7E-70 458.4 16.8 170 29-202 13-289 (290)
2 2zxe_B Na+,K+-ATPase beta subu 100.0 4.7E-64 1.6E-68 448.4 14.6 170 28-202 8-304 (305)
3 3kdp_B Sodium/potassium-transp 100.0 3.2E-62 1.1E-66 433.3 9.5 159 39-202 1-285 (286)
4 3arc_H Photosystem II reaction 39.6 39 0.0013 23.4 4.1 48 26-83 2-49 (65)
5 1xl4_A Inward rectifier potass 31.0 43 0.0015 28.9 4.0 32 43-74 35-67 (301)
6 2qme_I CRIB domain of the seri 27.6 19 0.00063 21.8 0.7 20 37-57 15-34 (36)
7 3spc_A Inward-rectifier K+ cha 24.4 66 0.0023 28.6 4.0 28 51-78 42-69 (343)
8 3sya_A G protein-activated inw 19.7 94 0.0032 27.5 4.0 28 51-78 40-67 (340)
9 2wh6_A Early antigen protein R 18.8 83 0.0028 25.6 3.2 22 47-68 104-126 (173)
10 2ov2_I Serine/threonine-protei 17.2 51 0.0018 19.5 1.2 20 37-57 15-34 (35)
No 1
>3ixz_B Potassium-transporting ATPase subunit beta; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_B 2xzb_B
Probab=100.00 E-value=4.9e-66 Score=458.41 Aligned_cols=170 Identities=29% Similarity=0.551 Sum_probs=154.4
Q ss_pred ccccceeeeecCCCCceecCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccccccccCCCC------
Q psy7835 29 KWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPVT------ 102 (205)
Q Consensus 29 ~~~~~~~fl~N~~t~~~lGRT~~sW~~I~lFYlifY~~La~lFa~~m~v~l~tl~~~~P~~~~~~s~Ig~~PGl------ 102 (205)
++++|++||||||||||||||++||++|+|||+|||+|||||||+||||||+|||+++|+|| |+. ++|||
T Consensus 13 ~~~~~k~f~~N~~t~~~lGRT~~sW~~IllFYliFY~~LaglFa~~m~v~l~Tld~~~Pkyq-d~~---~~PGL~~~P~~ 88 (290)
T 3ixz_B 13 RMEEFQRYCWNPDTGQMLGRTLSRWVWISLYYVAFYVVMSGIFALCIYVLMRTIDPYTPDYQ-DQL---KSPGVTLRPDV 88 (290)
T ss_pred hhhhhHhhEEcCCCCceeCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcc-ccc---CCCcceecCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999 553 89998
Q ss_pred C---C----------------------------------------C----------------------------------
Q psy7835 103 R---K----------------------------------------G---------------------------------- 105 (205)
Q Consensus 103 d---~----------------------------------------g---------------------------------- 105 (205)
+ . +
T Consensus 89 ~~~~~~~I~f~~sd~~s~~~yv~~l~~FL~~Y~~~~q~~~~~C~~~~~~~q~~~~~~~~~~~~C~F~~~~lg~Csg~~d~ 168 (290)
T 3ixz_B 89 YGEKGLDISYNVSDSTTWAGLAHTLHRFLAGYSPAAQEGSINCTSEKYFFQESFLAPNHTKFSCKFTADMLQNCSGRPDP 168 (290)
T ss_pred CCCcceEEEEeCCCchHHHHHHHHHHHHHHHhCchhccCcccCCCccccccccccCCCCCCceeeccccccCcCCCCCCC
Confidence 1 0 0
Q ss_pred ---------------Cccccee-----eeeEeeeeCCCCCCCCCcceEEeCCC-CCCCcceecc---CCCCCCCceEEEE
Q psy7835 106 ---------------NLTGNWR-----TIWVSCSGADPHDTETMGDVDYFPQP-GYPGYFYPYT---NTIGYLSPIIAVR 161 (205)
Q Consensus 106 ---------------N~~~Gw~-----~iwVsC~g~~~~d~e~ig~i~Y~P~~-gfp~~YfPY~---nq~~Y~sPLVAVq 161 (205)
|+.+||. .|||+|++++++|.+++|+|+|||.+ |||++||||+ +|++|+|||||||
T Consensus 169 ~fGY~~g~PCI~iKlNrIig~~P~~~~~~~V~C~~~~~~~~~~~~~i~YyP~~ggf~~~YfPYygk~~q~~YlqPLVAVq 248 (290)
T 3ixz_B 169 TFGFAEGKPCFIIKMNRIVKFLPGNSTAPRVDCAFLDQPRDGPPLQVEYFPANGTYSLHYFPYYGKKAQPHYSNPLVAAK 248 (290)
T ss_pred CCCcCCCCceEEEEeceEEeeecCCCCCCcceecCCCcccccCcceEEECCCCCCcCceeCCccCCcCCcCCcCCeEEEE
Confidence 0015555 49999999987777788899999999 7999999999 7999999999999
Q ss_pred eeCCCCCcEEEEEEEeecCCCccCCCCCccceEEEEEEEEe
Q psy7835 162 FRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLE 202 (205)
Q Consensus 162 f~n~~~n~~I~VeCkawAkNI~~~~~~~~~~G~V~F~L~vd 202 (205)
|+|+++|++|+|||||||+||.+++++|+++|||+|+|+|+
T Consensus 249 f~n~~~n~~v~VeCk~~a~NI~~d~~~d~~~G~V~Fkl~i~ 289 (290)
T 3ixz_B 249 LLNVPRNRDVVIVCKILAEHVSFDNPHDPYEGKVEFKLKIQ 289 (290)
T ss_pred EecCCCCcEEEEEEEEeccCCccCCCCCCccceEEEEEEec
Confidence 99999999999999999999999878899999999999996
No 2
>2zxe_B Na+,K+-ATPase beta subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_B* 3b8e_B*
Probab=100.00 E-value=4.7e-64 Score=448.35 Aligned_cols=170 Identities=31% Similarity=0.581 Sum_probs=131.3
Q ss_pred cccccceeeeecCCCCceecCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccccccccCCCC-----
Q psy7835 28 TKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPVT----- 102 (205)
Q Consensus 28 ~~~~~~~~fl~N~~t~~~lGRT~~sW~~I~lFYlifY~~La~lFa~~m~v~l~tl~~~~P~~~~~~s~Ig~~PGl----- 102 (205)
.++++|++|||||+|||+||||++||++|+|||+|||+|||||||+||||||+|||+++|+|| ++ | ++|||
T Consensus 8 ~~~~~~k~f~~n~~~~~~lGRT~~sW~~IllFYliFY~~La~lF~~~m~v~l~tl~~~~Pk~q-~~--i-~~PGL~~~P~ 83 (305)
T 2zxe_B 8 ETDGGWKKFLWDSEKKEFLGRTGSSWFKIFLFYLIFYGCLAGIFIGTIQVLLLTLSDFEPKYQ-DR--V-APPGLSHAPY 83 (305)
T ss_dssp --------------------CCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSCSCC-TT--T-CSCCBCCSSC
T ss_pred cchhhhhhheeCcccCeEecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccc-cC--C-CCCeeeEecC
Confidence 557899999999999999999999999999999999999999999999999999999999999 44 3 79999
Q ss_pred -----------CC----------------------C-C----------------c-------------------------
Q psy7835 103 -----------RK----------------------G-N----------------L------------------------- 107 (205)
Q Consensus 103 -----------d~----------------------g-N----------------~------------------------- 107 (205)
|+ + | .
T Consensus 84 ~~~~~I~f~~~~~~s~~~yv~~l~~FL~~Y~~~~q~~~~~~~~C~~~~~~~~~~g~~~~~~~~~~~C~F~~~~Lg~Cs~~ 163 (305)
T 2zxe_B 84 AIKTEISFSISNPKSYESFVKSMHKLMDLYNESSQAGNSPFEDCSDTPADYIKRGDLDDSQGQKKACRFSRMWLKNCSGL 163 (305)
T ss_dssp CSSSEEEECTTCGGGTHHHHHHHHHHHGGGCGGGSCSTTTEECCCSSCCCCCCCSSSCSSSSSCCEECCCGGGSTTC---
T ss_pred CCCeEEEEeCCChhhHHHHHHHHHHHHHHhcchhhccccccccCCCcccccccccccccCCCCCceeEeechhccCCCCC
Confidence 00 0 1 0
Q ss_pred --------------------cccee---------------------eeeEeeeeCCCCCCCCCcceEEeCCC---CCCCc
Q psy7835 108 --------------------TGNWR---------------------TIWVSCSGADPHDTETMGDVDYFPQP---GYPGY 143 (205)
Q Consensus 108 --------------------~~Gw~---------------------~iwVsC~g~~~~d~e~ig~i~Y~P~~---gfp~~ 143 (205)
.+||. .|||+|++++++|.|++|+|+|||.+ |||++
T Consensus 164 ~d~~fGY~~g~PCI~lKlNrI~g~~P~~~~~~~lP~~~l~~~~~~~~I~v~C~~~~~~d~e~~g~i~Y~P~~g~~gfp~~ 243 (305)
T 2zxe_B 164 DDTTYGYAEGKPCVVAKLNRIIGFYPKPLKNTTDLPEELQANYNQYVLPLRCAAKREEDREKIGSIEYFGLGGYAGFPLQ 243 (305)
T ss_dssp -----CCCSSSCCCEEEBCCCBTCCCCCCCTTSCCTTTTTTCCTTTEEEEEEEC-----CCCCSCEEEECGGGCSEEEGG
T ss_pred CCCCCCcCCCCCeEEEEecceecccccCCccccccHHHHhhhhccCCCceEeeccccccccccCCeEEECCCCCCCcCcc
Confidence 14443 26999999999999999999999998 89999
Q ss_pred ceeccC---CCCCCCceEEEEeeCCCCCcEEEEEEEeecCCCccCCCCCccceEEEEEEEEe
Q psy7835 144 FYPYTN---TIGYLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLE 202 (205)
Q Consensus 144 YfPY~n---q~~Y~sPLVAVqf~n~~~n~~I~VeCkawAkNI~~~~~~~~~~G~V~F~L~vd 202 (205)
||||+| |++|+||||||||.|+++|++|+|||||||+||.++ +|++++|||+|+|+||
T Consensus 244 YfPY~gk~~~~~Yl~PLVAVqf~n~~~n~~v~VeCka~a~NI~~~-~~d~~~G~v~fkl~i~ 304 (305)
T 2zxe_B 244 YYPYYGKRLQKKYLQPLLAIQFTNLTQNMELRIECKVYGENIDYS-EKDRFRGRFEVKIEVK 304 (305)
T ss_dssp GCSBCCTTTCTTCCCCEEEEEECCSCCSSCEEEEEEECCSSCCCC-SSCTTSSBCCEEEEEC
T ss_pred ccCCCCccCCcCCcCCeEEEEeecCCCCCEEEEEEEEeccCCCcC-CCccccceEEEEEEec
Confidence 999998 999999999999999999999999999999999664 8999999999999997
No 3
>3kdp_B Sodium/potassium-transporting ATPase subunit beta; alpha helical, heterotrimeric membrane protein complex, ATP- hydrolase, ION transport, magnesium; HET: CLR; 3.50A {Sus scrofa} PDB: 3n2f_B* 3n23_B*
Probab=100.00 E-value=3.2e-62 Score=433.27 Aligned_cols=159 Identities=33% Similarity=0.614 Sum_probs=146.3
Q ss_pred cCCCCceecCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccccccccCCCC----------------
Q psy7835 39 NPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPVT---------------- 102 (205)
Q Consensus 39 N~~t~~~lGRT~~sW~~I~lFYlifY~~La~lFa~~m~v~l~tl~~~~P~~~~~~s~Ig~~PGl---------------- 102 (205)
|||||||||||++||++|+|||+|||+|||||||+||||||||||+++|+|| |++ ++|||
T Consensus 1 Np~t~~~lGRT~~sW~~IllFYliFY~~La~lFa~~m~v~l~TLd~~~Pkyq-d~~---~~PGL~~~P~~~~~eI~f~~s 76 (286)
T 3kdp_B 1 NSEKKEFLGRTGGSWFKILLFYVIFYGCLAGIFIGTIQVMLLTISEFKPTYQ-DRV---APPGLTQIPQSQKTEISFRPN 76 (286)
T ss_dssp CCCCCTTSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHGGGSCSCSSSCSCC-TTT---CSCCCCBSSCCSSSEEECCSS
T ss_pred CCCCCceeCccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCccc-CCC---CCCcceeccCCCceEEEEECC
Confidence 8999999999999999999999999999999999999999999999999999 877 89998
Q ss_pred CC-----------------------C-C--------------c-------------------------------------
Q psy7835 103 RK-----------------------G-N--------------L------------------------------------- 107 (205)
Q Consensus 103 d~-----------------------g-N--------------~------------------------------------- 107 (205)
|+ + + |
T Consensus 77 d~~s~~~yv~~L~~FL~~Y~~~~q~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~C~F~~~~lg~Csg~~d~~fGY~~g~ 156 (286)
T 3kdp_B 77 DPQSYESYVVSIVRFLEKYKDLAQKDDMIFEDCGNVPSELKERGEYNNERGERKVCRSRLEWLGNCSGLNDETYGYKDGK 156 (286)
T ss_dssp CTTTTHHHHHHHHHHHTTCCTTTSCSTTTEECCCSSCCCCCCCCCSSSSSSSCCEECCCGGGSTTSCCCCSSSCCCCSSS
T ss_pred ChhhHHHHHHHHHHHHHHhcchhhcccccccccccCcccceeccccccCCCCCceeEeccccccCCCCCCCCCCCcCCCC
Confidence 10 0 1 0
Q ss_pred ---------cccee--e------------------eeEeeeeCCCCCCCCCcceEEeCCC---CCCCcceeccCC---CC
Q psy7835 108 ---------TGNWR--T------------------IWVSCSGADPHDTETMGDVDYFPQP---GYPGYFYPYTNT---IG 152 (205)
Q Consensus 108 ---------~~Gw~--~------------------iwVsC~g~~~~d~e~ig~i~Y~P~~---gfp~~YfPY~nq---~~ 152 (205)
.+||+ . |||+|++++++|.|++|+|+|||.+ |||++||||+|+ ++
T Consensus 157 PCI~lKlNRIig~~P~~~~~~~~~~~p~~~l~~~~i~V~C~~~~~~d~e~ig~i~YyP~~g~~gfp~~YfPYygk~~~~~ 236 (286)
T 3kdp_B 157 PCVIIKLNRVLGFKPKPPKNESLETYPVMKYNPYVLPVHCTGKRDEDKEKVGTMEYFGLGGYPGFPLQYYPYYGKLLQPK 236 (286)
T ss_dssp CCBCBCCCCCBTCCCCCCCSSSCSSCSSSCCTTTBCCEEEESSSSSCCCCCCCBCCCCTTSCSSCBTTSCSBCTTTSCTT
T ss_pred CeEEEEeccccceeecccCCCCcccccchhccCCceeeeccCcCccccccccceEEcCCCCCCCCCcccCCCCCCcCCCC
Confidence 15554 1 6999999999999999999999997 599999999997 99
Q ss_pred CCCceEEEEeeCCCCCcEEEEEEEeecCCCccCCCCCccceEEEEEEEEe
Q psy7835 153 YLSPIIAVRFRNPGVGTLINVECRAWAKNIRYKKSGLNREGSVHFELLLE 202 (205)
Q Consensus 153 Y~sPLVAVqf~n~~~n~~I~VeCkawAkNI~~~~~~~~~~G~V~F~L~vd 202 (205)
|+||||||||.|+++|++|+|||||||+||.++ +|++++|||+|+|+|.
T Consensus 237 YlqPLVAVqf~n~~~n~~v~VeCk~~a~NI~~~-~~d~~~G~v~fkl~i~ 285 (286)
T 3kdp_B 237 YLQPLMAVQFTNLTMDTEIRIECKAYGENIGYS-EKDRFQGRFDVKIEVK 285 (286)
T ss_dssp CCCCCCCBCBCCSCCSCCCCBEEEECSTTCCCC-SSCTTTTSCCBEEECC
T ss_pred CcCCeEEEEeecCCCCcEEEEEEEEeccCCCcC-CCccccceEEEEEEec
Confidence 999999999999999999999999999999996 8999999999999985
No 4
>3arc_H Photosystem II reaction center protein H; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 3kzi_H* 3bz1_H* 1s5l_H* 2axt_H* 3bz2_H* 3prq_H* 3prr_H* 3a0b_H* 3a0h_H*
Probab=39.64 E-value=39 Score=23.40 Aligned_cols=48 Identities=17% Similarity=0.385 Sum_probs=30.1
Q ss_pred CCcccccceeeeecCCCCceecCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy7835 26 GNTKWQNFKLCIYNPQTGEVFGRTPKSWGGIFLFYVIFYSILACLFAICMYVLMSTLT 83 (205)
Q Consensus 26 ~~~~~~~~~~fl~N~~t~~~lGRT~~sW~~I~lFYlifY~~La~lFa~~m~v~l~tl~ 83 (205)
++|+..++-+-+ |+|-|+ .+-.|+-..+- ++..++|++.+.++++.-+
T Consensus 2 ~~T~lG~~LKpL-NSeyGK----vaPGWGTtplM-----gv~m~Lf~vFl~iiLeIYN 49 (65)
T 3arc_H 2 RRTWLGDILRPL-NSEYGK----VAPGWGTTPLM-----AVFMGLFLVFLLIILEIYN 49 (65)
T ss_dssp BCCHHHHHHGGG-GCCTTC----CBSTTTTHHHH-----HHHHHHHHHHHHHHHHHHT
T ss_pred cccchhhhcccc-ccccCc----ccCCccChhHH-----HHHHHHHHHHHHHHHHHhC
Confidence 455555555555 777665 58899876543 3344667777777776544
No 5
>1xl4_A Inward rectifier potassium channel; integral membrane protein, ION channel, inwardly rectifying channel, metal transport; 2.60A {Magnetospirillum magnetotacticum} SCOP: b.1.18.16 f.14.1.1 PDB: 1xl6_A* 2wlh_A 2wli_B 2wlj_A* 2wlk_A* 2wlm_A 2wlo_A 2wln_A 3zrs_A 2wli_A 2x6c_A* 2x6b_A* 2x6a_A*
Probab=30.99 E-value=43 Score=28.89 Aligned_cols=32 Identities=19% Similarity=0.383 Sum_probs=24.8
Q ss_pred CceecCC-CCchhhhhHHHHHHHHHHHHHHHHH
Q psy7835 43 GEVFGRT-PKSWGGIFLFYVIFYSILACLFAIC 74 (205)
Q Consensus 43 ~~~lGRT-~~sW~~I~lFYlifY~~La~lFa~~ 74 (205)
..+++++ ..+|..++++.++.|+++..+||+.
T Consensus 35 ~d~~~~~l~~~~~~ll~~~~~~~~~~~l~fa~l 67 (301)
T 1xl4_A 35 DDHYHDLLTVSWPVFITLITGLYLVTNALFALA 67 (301)
T ss_dssp CSSTTHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555 4689999999999999888888877
No 6
>2qme_I CRIB domain of the serine/threonine-protein kinas; GTPase RAC3, small GTP binding protein, P21 RAC, RAS-related botulinum toxin substrate 3; HET: GCP; 1.75A {Homo sapiens}
Probab=27.56 E-value=19 Score=21.76 Aligned_cols=20 Identities=30% Similarity=0.743 Sum_probs=8.4
Q ss_pred eecCCCCceecCCCCchhhhh
Q psy7835 37 IYNPQTGEVFGRTPKSWGGIF 57 (205)
Q Consensus 37 l~N~~t~~~lGRT~~sW~~I~ 57 (205)
=||+++|++-|- +..|..++
T Consensus 15 g~d~~tG~~~gl-p~~W~~ll 34 (36)
T 2qme_I 15 GFDAVTGEFTGM-PEQWARLL 34 (36)
T ss_dssp CCBTTTTBCC-----------
T ss_pred ccCCCCCcccCC-CHHHHHHH
Confidence 489999997664 67887664
No 7
>3spc_A Inward-rectifier K+ channel KIR2.2; PIP, membrane protein, lipid, receptor, metal transport; HET: P8P; 2.45A {Gallus gallus} PDB: 3jyc_A* 3spi_A* 3sph_A* 3spj_A 3spg_A*
Probab=24.43 E-value=66 Score=28.56 Aligned_cols=28 Identities=14% Similarity=0.529 Sum_probs=23.8
Q ss_pred CchhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy7835 51 KSWGGIFLFYVIFYSILACLFAICMYVL 78 (205)
Q Consensus 51 ~sW~~I~lFYlifY~~La~lFa~~m~v~ 78 (205)
.+|-.+++.+++.|+++-.+||+..|.+
T Consensus 42 l~Wr~~ll~f~~~y~~swl~Fally~~i 69 (343)
T 3spc_A 42 IRWRYMLLLFSLAFLVSWLLFGLIFWLI 69 (343)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788899999999999999999887764
No 8
>3sya_A G protein-activated inward rectifier potassium CH; ION channel, potassium channel, inward rectification, sodium PIP2 binding, G protein binding; HET: PIO; 2.98A {Mus musculus} PDB: 3syo_A 3syc_A 3syp_A 3syq_A*
Probab=19.69 E-value=94 Score=27.51 Aligned_cols=28 Identities=18% Similarity=0.547 Sum_probs=23.5
Q ss_pred CchhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy7835 51 KSWGGIFLFYVIFYSILACLFAICMYVL 78 (205)
Q Consensus 51 ~sW~~I~lFYlifY~~La~lFa~~m~v~ 78 (205)
.+|-.+++..++.|++.-.+||+..|+.
T Consensus 40 l~Wr~~llif~~~y~~swl~Fa~ly~~i 67 (340)
T 3sya_A 40 LKWRFNLLIFVMVYTVTWLFFGMIWWLI 67 (340)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788888999999998888999887765
No 9
>2wh6_A Early antigen protein R; mitochondrion, early protein, transmembrane, viral protein,; 1.50A {Human herpesvirus 4} PDB: 2v6q_A 2xpx_A 1q59_A
Probab=18.81 E-value=83 Score=25.61 Aligned_cols=22 Identities=9% Similarity=-0.032 Sum_probs=15.1
Q ss_pred cCCC-CchhhhhHHHHHHHHHHH
Q psy7835 47 GRTP-KSWGGIFLFYVIFYSILA 68 (205)
Q Consensus 47 GRT~-~sW~~I~lFYlifY~~La 68 (205)
=|+| -+|++|+.||.+-++.++
T Consensus 104 F~dG~INWGRIVALfaF~~~al~ 126 (173)
T 2wh6_A 104 FHRGDPSLGRALAWMAWCMHACR 126 (173)
T ss_dssp HSSSCCCHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCcceehhhhhhccccee
Confidence 3567 499999998864344444
No 10
>2ov2_I Serine/threonine-protein kinase PAK 4; GTPase RAC3, small GTP binding protein, P21 RAC, RAS-related botulinum toxin substrate 3, signalling protein; HET: GCP; 2.10A {Homo sapiens}
Probab=17.24 E-value=51 Score=19.55 Aligned_cols=20 Identities=15% Similarity=0.569 Sum_probs=15.2
Q ss_pred eecCCCCceecCCCCchhhhh
Q psy7835 37 IYNPQTGEVFGRTPKSWGGIF 57 (205)
Q Consensus 37 l~N~~t~~~lGRT~~sW~~I~ 57 (205)
=||++||++-|- +..|..++
T Consensus 15 g~d~~tg~~~Gl-p~eW~~ll 34 (35)
T 2ov2_I 15 GFDQHEQKFTGL-PRQWQSLI 34 (35)
T ss_dssp EEETTTTEEESC-CGGGTTTC
T ss_pred eeCCCCCcccCC-CHHHHHHh
Confidence 499999988774 57787654
Done!