Query psy7836
Match_columns 189
No_of_seqs 165 out of 1563
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 20:07:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7836.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7836hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fu0_A Cyclophilin, putative; 100.0 1.6E-51 5.5E-56 319.0 17.3 152 2-155 6-158 (160)
2 2x7k_A Peptidyl-prolyl CIS-tra 100.0 3.7E-51 1.3E-55 318.7 17.3 152 3-156 13-165 (166)
3 2ok3_A Peptidyl-prolyl CIS-tra 100.0 4.8E-51 1.6E-55 316.7 17.2 152 3-156 2-155 (161)
4 2a2n_A Peptidylprolyl isomeras 100.0 1.7E-50 5.8E-55 317.5 17.5 152 2-155 22-175 (176)
5 2b71_A Cyclophilin-like protei 100.0 3.2E-50 1.1E-54 320.4 17.1 152 3-156 40-192 (196)
6 2hq6_A Serologically defined c 100.0 4.4E-50 1.5E-54 317.3 17.7 154 2-155 25-178 (185)
7 2poe_A Cyclophilin-like protei 100.0 4.3E-50 1.5E-54 317.5 17.0 152 3-156 18-174 (185)
8 1zkc_A Peptidyl-prolyl CIS-tra 100.0 9.4E-50 3.2E-54 317.8 17.9 153 2-156 20-174 (197)
9 3bo7_A Peptidyl-prolyl CIS-tra 100.0 2.9E-49 9.8E-54 316.6 17.1 152 3-156 8-172 (201)
10 2k7n_A Peptidyl-prolyl CIS-tra 100.0 1.6E-49 5.6E-54 317.6 15.4 152 3-156 13-165 (203)
11 3bkp_A Cyclophilin; malaria, i 100.0 9.5E-49 3.2E-53 319.2 16.6 154 3-156 23-192 (232)
12 2wfi_A Peptidyl-prolyl CIS-tra 100.0 6.3E-49 2.2E-53 309.5 14.7 153 1-159 14-179 (179)
13 1a58_A Cyclophilin; isomerase, 100.0 1.6E-48 5.3E-53 306.8 14.7 149 5-159 15-176 (177)
14 1w74_A Peptidyl-prolyl CIS-tra 100.0 5E-48 1.7E-52 306.8 16.9 148 3-155 25-190 (191)
15 1mzw_A Cyclophilin H, U-snRNP- 100.0 1.3E-48 4.5E-53 307.1 13.2 151 3-159 12-177 (177)
16 2he9_A NK-tumor recognition pr 100.0 2.5E-48 8.6E-53 308.9 14.8 153 1-159 24-189 (192)
17 2haq_A Cyclophilin; rotamase, 100.0 1.3E-48 4.6E-53 305.6 12.9 149 1-153 16-169 (172)
18 2cmt_A Peptidyl-prolyl CIS-tra 100.0 1.3E-47 4.3E-52 300.2 17.0 150 3-159 12-171 (172)
19 3pmp_A Cyclophilin A; peptidyl 100.0 5.6E-48 1.9E-52 300.4 14.4 151 2-159 8-163 (164)
20 2z6w_A Peptidyl-prolyl CIS-tra 100.0 7.9E-48 2.7E-52 299.7 14.3 146 7-159 14-164 (165)
21 1qng_A Peptidyl-prolyl CIS-tra 100.0 1.6E-47 5.3E-52 299.3 15.4 150 3-159 5-170 (170)
22 3ich_A Peptidyl-prolyl CIS-tra 100.0 7.3E-48 2.5E-52 305.4 13.5 149 8-162 27-180 (188)
23 2igv_A Peptidyl-prolyl CIS-tra 100.0 3.2E-47 1.1E-51 298.3 16.2 150 3-159 5-171 (173)
24 2r99_A Peptidyl-prolyl CIS-tra 100.0 4.3E-47 1.5E-51 297.6 16.8 145 8-159 23-172 (173)
25 4fru_A Cyclophilin B, peptidyl 100.0 7.2E-47 2.5E-51 299.3 15.8 149 8-162 24-177 (185)
26 1lop_A Cyclophilin A; rotamase 100.0 2.9E-47 1E-51 296.3 13.0 148 3-155 1-162 (164)
27 3s6m_A Peptidyl-prolyl CIS-tra 100.0 6.4E-47 2.2E-51 295.2 15.0 148 3-155 5-166 (167)
28 1v9t_A Cyclophilin B; beta bar 100.0 1.7E-46 5.9E-51 292.5 15.0 149 2-155 5-164 (166)
29 2poy_A Peptidyl-prolyl CIS-tra 100.0 2.6E-46 9E-51 295.9 16.2 147 3-153 21-184 (186)
30 3rdd_A Peptidyl-prolyl CIS-tra 100.0 5.6E-46 1.9E-50 293.7 16.2 150 3-159 24-183 (184)
31 2c3b_A Ppiase, cyclophilin; is 100.0 1.4E-46 4.6E-51 294.5 10.7 147 7-159 18-172 (172)
32 1z81_A Cyclophilin; structural 100.0 7.7E-46 2.6E-50 301.1 15.3 151 3-159 61-229 (229)
33 3k2c_A Peptidyl-prolyl CIS-tra 100.0 9.1E-46 3.1E-50 294.5 14.6 146 8-160 39-191 (193)
34 2ose_A Probable peptidyl-proly 100.0 4.8E-45 1.6E-49 297.9 14.2 168 3-177 16-225 (234)
35 1ihg_A Cyclophilin 40; ppiase 100.0 3.8E-43 1.3E-47 302.9 16.6 150 3-156 17-184 (370)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 3E-39 1E-43 277.5 11.8 148 3-164 172-362 (369)
37 2nnz_A Hypothetical protein; b 69.7 3.9 0.00013 30.4 3.4 31 3-33 31-61 (153)
38 3kop_A Uncharacterized protein 61.1 8.4 0.00029 29.6 3.8 38 12-49 34-77 (188)
39 2khf_A PLNJ; anti-microbial, b 55.3 3.3 0.00011 20.8 0.5 15 27-41 4-18 (26)
40 1x7f_A Outer surface protein; 42.2 21 0.00073 30.4 3.8 51 83-134 326-376 (385)
41 2p0o_A Hypothetical protein DU 39.7 21 0.0007 30.4 3.3 51 83-134 300-350 (372)
42 1zx8_A Hypothetical protein TM 28.2 1.7E+02 0.0057 21.0 10.1 91 3-124 14-116 (136)
43 2k9u_B Filamin-binding LIM pro 27.9 28 0.00097 17.7 1.3 13 97-109 8-20 (26)
No 1
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=1.6e-51 Score=318.98 Aligned_cols=152 Identities=43% Similarity=0.752 Sum_probs=146.7
Q ss_pred cEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCccCCceEEEeecCcEEecCCCCCCCCCCCcccCCCCCCcccCCcc
Q psy7836 2 QAVLLKTSVGDIDIELWSREAPKACRNFVQLCMEGYYNNTIIHRVVKGFIAQGGDPTGTGTGGESIYGKPFKDEIHSRLR 81 (189)
Q Consensus 2 ~~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~rv~~~~~iqgGd~~~~~~~~~~~~g~~~~~E~~~~l~ 81 (189)
.+|+++|++|+|+||||++.||+||+||++||+.|||+|+.|||++|+||+||||+.+++.+++++|++.|++|..+.++
T Consensus 6 ~~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~ 85 (160)
T 2fu0_A 6 KSAIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTGGESIWGNEFEDEFFDHLN 85 (160)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCBTTBC
T ss_pred CEEEEEecCccEEEEEeCCCChHHHHHHHHHhccCccCCCEEEEEECCCEEEeCCcCCCCCCCCcccCCCccccccCCcc
Confidence 37999999999999999999999999999999999999999999999999999999988999999999999999988899
Q ss_pred cccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccCeEEEEEee
Q psy7836 82 FVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEYRKRINYEG 155 (189)
Q Consensus 82 ~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~i~I~~~~~ 155 (189)
|+++|+|||||.++++++|||||++.++||||++|+|||+|+ ||++ +++|++++++.+++|.++|+|.+|++
T Consensus 86 h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dv--v~~I~~~~t~~~~~P~~~v~I~~~~v 158 (160)
T 2fu0_A 86 HSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKI--VLDIEKVRTDKRDKPLEDIKILNIKI 158 (160)
T ss_dssp SSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTSCBCTTSCBSSCCBEEEEEE
T ss_pred cCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHH--HHHHHhCCcCCCCCcCCCeEEEEEEE
Confidence 999999999999999999999999999999999999999999 9988 99999999998999999999999875
No 2
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=3.7e-51 Score=318.68 Aligned_cols=152 Identities=49% Similarity=0.821 Sum_probs=146.9
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCccCCceEEEeecCcEEecCCCCCCCCCCCcccCCCCCCcccCCccc
Q psy7836 3 AVLLKTSVGDIDIELWSREAPKACRNFVQLCMEGYYNNTIIHRVVKGFIAQGGDPTGTGTGGESIYGKPFKDEIHSRLRF 82 (189)
Q Consensus 3 ~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~rv~~~~~iqgGd~~~~~~~~~~~~g~~~~~E~~~~l~~ 82 (189)
+|+|+|++|+|+||||++.||+||+||++||+.|||+|+.|||++|+|++||||+.+++.+++++|++.|++|..+.++|
T Consensus 13 ~v~l~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~h 92 (166)
T 2x7k_A 13 NVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKF 92 (166)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCCTTSCC
T ss_pred EEEEEeCCCcEEEEEccCCCCHHHHHHHHHHhcCCCCCCEEEEEECCCEEEcCCCCCCCCCCCccCCCccccccccccCC
Confidence 79999999999999999999999999999999999999999999999999999999899999999999999999778999
Q ss_pred ccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccCeEEEEEeec
Q psy7836 83 VRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEYRKRINYEGA 156 (189)
Q Consensus 83 ~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~i~I~~~~~~ 156 (189)
+++|+|||||.++++++|||||++.+++|||++|+|||+|+ ||++ +++|++++++.+++|.++|+|.+|++-
T Consensus 93 ~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dv--v~~I~~~~t~~~~~P~~~i~I~~~~i~ 165 (166)
T 2x7k_A 93 TGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGM--VNRVGMVETNSQDRPVDDVKIIKAYPS 165 (166)
T ss_dssp CSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHTTSCBCTTSCBSSCCEEEEEEEC
T ss_pred CCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHH--HHHHHcCCcCCCCCcCCCeEEEEEEEe
Confidence 88999999999999999999999999999999999999999 9988 999999999998999999999998764
No 3
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=4.8e-51 Score=316.73 Aligned_cols=152 Identities=45% Similarity=0.765 Sum_probs=146.3
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCccCCceEEEeecCcEEecCCCCCCCCCCCcccCCCCCCcccCCccc
Q psy7836 3 AVLLKTSVGDIDIELWSREAPKACRNFVQLCMEGYYNNTIIHRVVKGFIAQGGDPTGTGTGGESIYGKPFKDEIHSRLRF 82 (189)
Q Consensus 3 ~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~rv~~~~~iqgGd~~~~~~~~~~~~g~~~~~E~~~~l~~ 82 (189)
+|+|+|++|+|+||||++.||+||+||++||++|||+|+.|||++|+|++||||+.+++.+++++|+..+++|..+.++|
T Consensus 2 ~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~h 81 (161)
T 2ok3_A 2 SVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKKFEDEYSEYLKH 81 (161)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCCTTCCS
T ss_pred EEEEEeCCccEEEEEcCCCCcHHHHHHHHHhhhcccCCCEEEEEECCCEEecCCCCCCCCCCCcccCCccccccCcCcCc
Confidence 58999999999999999999999999999999999999999999999999999999889999999999999999878999
Q ss_pred ccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCC-CCcccCeEEEEEeec
Q psy7836 83 VRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHV-STYLEYRKRINYEGA 156 (189)
Q Consensus 83 ~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~-~~P~~~i~I~~~~~~ 156 (189)
+++|+|||||.++++++|||||++.+++|||++|+|||+|+ |+++ +++|++++++.. ++|.++|+|.+|++.
T Consensus 82 ~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dv--v~~I~~~~~~~~~~~P~~~v~I~~~~i~ 155 (161)
T 2ok3_A 82 NVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLET--LDELEKLPVNEKTYRPLNDVHIKDITIH 155 (161)
T ss_dssp CSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTCCBCTTTCCBSSCCBEEEEEEE
T ss_pred CCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHH--HHHHHhCCccCCCCCcCCCeEEEEEEEe
Confidence 99999999999999999999999999999999999999999 9988 999999999887 999999999998764
No 4
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.7e-50 Score=317.48 Aligned_cols=152 Identities=45% Similarity=0.763 Sum_probs=146.5
Q ss_pred cEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCccCCceEEEeecCcEEecCCCCCCCCCCCcccCCCCCCcccCCcc
Q psy7836 2 QAVLLKTSVGDIDIELWSREAPKACRNFVQLCMEGYYNNTIIHRVVKGFIAQGGDPTGTGTGGESIYGKPFKDEIHSRLR 81 (189)
Q Consensus 2 ~~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~rv~~~~~iqgGd~~~~~~~~~~~~g~~~~~E~~~~l~ 81 (189)
.+|+++|++|+|+||||++.||+||+||++||+.|||+|+.|||++|+||+||||+.+++.+++++||..|++|..+.++
T Consensus 22 ~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~ 101 (176)
T 2a2n_A 22 DSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLR 101 (176)
T ss_dssp SEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCCTTCC
T ss_pred CEEEEEecCccEEEEEeCCCChHHHHHHHHHhhcCccCCCEEEEEECCcEEEccCCCCCCCCCCcccCCccccccccccc
Confidence 47999999999999999999999999999999999999999999999999999999988999999999999999987899
Q ss_pred cccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccC-CCCCcccCeEEEEEee
Q psy7836 82 FVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVD-HVSTYLEYRKRINYEG 155 (189)
Q Consensus 82 ~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~-~~~~P~~~i~I~~~~~ 155 (189)
|+++|+|||||.++++++|||||++.+++|||++|+|||+|+ ||++ +++|++++++ .+++|.++|+|.+|++
T Consensus 102 h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdv--v~~I~~~~t~~~~~~P~~~v~I~~v~v 175 (176)
T 2a2n_A 102 HDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEV--VQRISNVKVNPKTDKPYEDVSIINITV 175 (176)
T ss_dssp SCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTSCBCTTTCCBSSCCBEEEEEE
T ss_pred cCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHH--HHHHHcCCccCCCCccCCCeEEEEEEE
Confidence 999999999999999999999999999999999999999999 9988 9999999998 6899999999999876
No 5
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=3.2e-50 Score=320.42 Aligned_cols=152 Identities=42% Similarity=0.756 Sum_probs=146.2
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCccCCceEEEeecCcEEecCCCCCCCCCCCcccCCCCCCcccCCccc
Q psy7836 3 AVLLKTSVGDIDIELWSREAPKACRNFVQLCMEGYYNNTIIHRVVKGFIAQGGDPTGTGTGGESIYGKPFKDEIHSRLRF 82 (189)
Q Consensus 3 ~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~rv~~~~~iqgGd~~~~~~~~~~~~g~~~~~E~~~~l~~ 82 (189)
+|+|+|++|+|+||||++.||+||+||++||+.|||+|+.|||++|+||+||||+.+++.+++++||.+|++|..+.++|
T Consensus 40 ~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRVi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~h 119 (196)
T 2b71_A 40 YITIYTNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTGKGGKSIYGEYFEDEINKELKH 119 (196)
T ss_dssp EEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEEEETTSSSSCCCBTTBSCBCCCCCTTCCC
T ss_pred EEEEEeCCCCEEEEEeCCCCcHHHHHHHHHhhcCCcCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCcccccccCCcCc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999998778999
Q ss_pred ccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccCeEEEEEeec
Q psy7836 83 VRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEYRKRINYEGA 156 (189)
Q Consensus 83 ~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~i~I~~~~~~ 156 (189)
+++|+||||+.++++++|||||++.+++|||++|+|||+|+ ||++ +++|++++++.+++|.++|+|.+|++.
T Consensus 120 ~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdv--v~~I~~~~t~~~~~P~~~i~I~~~~i~ 192 (196)
T 2b71_A 120 TGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTC--IENIASVQTTATNKPIFDLKILRTSTA 192 (196)
T ss_dssp CSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTSCBCTTCCBSSCCEEEEEEC-
T ss_pred CCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHH--HHHHHhCCcCCCCCCCCCeEEEEEEEe
Confidence 99999999999999999999999999999999999999999 9988 999999999999999999999997753
No 6
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=4.4e-50 Score=317.29 Aligned_cols=154 Identities=71% Similarity=1.148 Sum_probs=147.5
Q ss_pred cEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCccCCceEEEeecCcEEecCCCCCCCCCCCcccCCCCCCcccCCcc
Q psy7836 2 QAVLLKTSVGDIDIELWSREAPKACRNFVQLCMEGYYNNTIIHRVVKGFIAQGGDPTGTGTGGESIYGKPFKDEIHSRLR 81 (189)
Q Consensus 2 ~~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~rv~~~~~iqgGd~~~~~~~~~~~~g~~~~~E~~~~l~ 81 (189)
.+|+|+|++|+|+||||++.||+||+||++||+.|||+|+.||||+|+||+||||+.+++.+++++||.+|++|..+.++
T Consensus 25 ~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~ 104 (185)
T 2hq6_A 25 GKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLR 104 (185)
T ss_dssp CEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHTTTTTTEECCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCBTTBC
T ss_pred CEEEEEeCCccEEEEEeCCCCcHHHHHHHHHhhcCccCCCEEEEEECCCEEEcCCCCCCCCCCCcccCCccccccccCcc
Confidence 37999999999999999999999999999999999999999999999999999999988999999999999999987899
Q ss_pred cccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEEcCcchhhhhhhhcccCCCCCcccCeEEEEEee
Q psy7836 82 FVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVAGDTIYNMIKLDEIMVDHVSTYLEYRKRINYEG 155 (189)
Q Consensus 82 ~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~G~~v~~l~~i~~~~~~~~~~P~~~i~I~~~~~ 155 (189)
|+++|+|||||.++++++|||||++.++++||++|+|||+|+|++++.+++|++++++.+++|.++|+|.+|.+
T Consensus 105 h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~G~~v~~~~~i~~~~~~~~~~P~~~v~I~~~~v 178 (185)
T 2hq6_A 105 FNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVTGDTVYNMLRLSEVDIDDDERPHNPHKIKSCEV 178 (185)
T ss_dssp SCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEECGGGHHHHHHTTCSCBCTTSCBSSCCEEEEEEE
T ss_pred cCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEEeCeeehhhHHhhCCcCCCCCCCCCeEEEEEEE
Confidence 99999999999999999999999999999999999999999998888788999999999999999999999655
No 7
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=4.3e-50 Score=317.45 Aligned_cols=152 Identities=45% Similarity=0.777 Sum_probs=146.1
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCccCCceEEEeecCcEEecCCCCCCCCCCCcccCCCCCCcccCCccc
Q psy7836 3 AVLLKTSVGDIDIELWSREAPKACRNFVQLCMEGYYNNTIIHRVVKGFIAQGGDPTGTGTGGESIYGKPFKDEIHSRLRF 82 (189)
Q Consensus 3 ~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~rv~~~~~iqgGd~~~~~~~~~~~~g~~~~~E~~~~l~~ 82 (189)
.|+|+|++|+|+||||++.||+||+||++||++|||+|+.||||+|+||+||||+.+++.+++++||.+|++|..+.++|
T Consensus 18 ~v~i~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~h 97 (185)
T 2poe_A 18 GVRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKGGESIYGRYFDDEIYPELKY 97 (185)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTEEEEEECTTSEEEEEETTSSSSCCCBTTBSCBCCCCCTTSCC
T ss_pred EEEEEecCccEEEEEeCCCCcHHHHHHHHHhccCCCCCCEEEEEECCCEEEcCCCCCCCCCCCccCCCcccccccCCCcc
Confidence 68999999999999999999999999999999999999999999999999999999889999999999999998778999
Q ss_pred ccceEEEEeccC----CCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccCeEEEEEeec
Q psy7836 83 VRRGLVAMANAG----KDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEYRKRINYEGA 156 (189)
Q Consensus 83 ~~~G~vsm~~~~----~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~i~I~~~~~~ 156 (189)
+++|+|||||.+ +++++|||||++++++|||++|+|||+|+ ||++ |++|++++++.+++|.++|+|.+|.+.
T Consensus 98 ~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdv--v~~I~~~~t~~~~~P~~~v~I~~~~i~ 174 (185)
T 2poe_A 98 DRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFET--LNTLENCPSDKSHKPIDEIIIKDIVIH 174 (185)
T ss_dssp CSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHHSCBCTTSCBSSCCEEEEEEEE
T ss_pred CCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHH--HHHHHhCCcCCCCCcCCCeEEEEEEEE
Confidence 999999999998 99999999999999999999999999999 9988 999999999999999999999997654
No 8
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=9.4e-50 Score=317.81 Aligned_cols=153 Identities=43% Similarity=0.752 Sum_probs=146.3
Q ss_pred cEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCccCCceEEEeecCcEEecCCCCCCCCCCCcccCCCCCCcccCCcc
Q psy7836 2 QAVLLKTSVGDIDIELWSREAPKACRNFVQLCMEGYYNNTIIHRVVKGFIAQGGDPTGTGTGGESIYGKPFKDEIHSRLR 81 (189)
Q Consensus 2 ~~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~rv~~~~~iqgGd~~~~~~~~~~~~g~~~~~E~~~~l~ 81 (189)
.+|+|+|++|+|+||||++.||+||+||++||+.|||+|+.||||+|+|||||||+.+++.+++++||.+|++|..+.++
T Consensus 20 ~~v~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~f~iQgGd~~~~g~Gg~si~g~~f~dE~~~~l~ 99 (197)
T 1zkc_A 20 GYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNLS 99 (197)
T ss_dssp EEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEECCTTSSSSCCCBTTBSCBCCCCCTTCC
T ss_pred cEEEEEeCCccEEEEEcCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCCEEEcCCCCCCCCCCCccCCCccccccCcCcC
Confidence 36999999999999999999999999999999999999999999999999999999988999999999999999877899
Q ss_pred cccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCC-CCcccCeEEEEEeec
Q psy7836 82 FVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHV-STYLEYRKRINYEGA 156 (189)
Q Consensus 82 ~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~-~~P~~~i~I~~~~~~ 156 (189)
|+++|+|||||.++++++|||||++.++++||++|+|||+|+ ||++ |++|++++++.+ ++|.++|+|.+|.+.
T Consensus 100 h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdv--v~~I~~~~t~~~~~~P~~~i~I~~~~v~ 174 (197)
T 1zkc_A 100 HTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDV--LTAMENVESDPKTDRPKEEIRIDATTVF 174 (197)
T ss_dssp SCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHHSCBCTTTCCBSSCCEEEEEEEE
T ss_pred CCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHH--HHHHHcCCCCCCCCCcCCCeEEEEEEEE
Confidence 999999999999999999999999999999999999999999 9988 999999999887 999999999997654
No 9
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=2.9e-49 Score=316.63 Aligned_cols=152 Identities=36% Similarity=0.613 Sum_probs=139.6
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCccCCceEEEeecCcEEecC-----CCCCCCCCCCccc-------CC
Q psy7836 3 AVLLKTSVGDIDIELWSREAPKACRNFVQLCMEGYYNNTIIHRVVKGFIAQGG-----DPTGTGTGGESIY-------GK 70 (189)
Q Consensus 3 ~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~rv~~~~~iqgG-----d~~~~~~~~~~~~-------g~ 70 (189)
+|+|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||+|+||+||| |+.+++.+++++| +.
T Consensus 8 ~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~~~g~gg~si~~~~~~~~g~ 87 (201)
T 3bo7_A 8 YLRIVTTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPSKKKEVQQSPRSISGFPGGA 87 (201)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEECCGGGCCC-------CCSSCCCSSTTCC
T ss_pred EEEEEeCCCCEEEEEcCCCCcHHHHHHHHHHhcCccCCCEEEEeeCCCEEEcCcccccCCCCCCCCCccccccccccCCC
Confidence 68999999999999999999999999999999999999999999999999999 9998888999998 89
Q ss_pred CCCCcccCCcccccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccCeE
Q psy7836 71 PFKDEIHSRLRFVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEYRK 149 (189)
Q Consensus 71 ~~~~E~~~~l~~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~i~ 149 (189)
.|++|..+.++|+++|+|||||.++++++|||||++.+++|||++|+|||+|+ ||++ |++|++++++.+++|.++|+
T Consensus 88 ~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdv--v~~I~~~~t~~~~~P~~~i~ 165 (201)
T 3bo7_A 88 PFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDV--LRQWEKLETDKKDKPLKPPK 165 (201)
T ss_dssp CBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHTTCCBCTTSCBSSCCB
T ss_pred cccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHH--HHHHHhCCcCCCCCcCCCeE
Confidence 99999877899999999999999999999999999999999999999999999 9988 99999999999999999999
Q ss_pred EEEEeec
Q psy7836 150 RINYEGA 156 (189)
Q Consensus 150 I~~~~~~ 156 (189)
|.+|.+.
T Consensus 166 I~~~~v~ 172 (201)
T 3bo7_A 166 VEEIIVF 172 (201)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9997654
No 10
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=1.6e-49 Score=317.58 Aligned_cols=152 Identities=49% Similarity=0.821 Sum_probs=146.5
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCccCCceEEEeecCcEEecCCCCCCCCCCCcccCCCCCCcccCCccc
Q psy7836 3 AVLLKTSVGDIDIELWSREAPKACRNFVQLCMEGYYNNTIIHRVVKGFIAQGGDPTGTGTGGESIYGKPFKDEIHSRLRF 82 (189)
Q Consensus 3 ~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~rv~~~~~iqgGd~~~~~~~~~~~~g~~~~~E~~~~l~~ 82 (189)
+|+|+|++|+|+||||++.||+||+||++||+.|||+|+.||||+|+|||||||+.+++.+++++|++.|++|+.+.++|
T Consensus 13 ~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~F~iQgGd~~~~g~gg~si~g~~f~dE~~~~l~h 92 (203)
T 2k7n_A 13 NVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKF 92 (203)
T ss_dssp EEEEEESSCEEEEEECTTTCTTHHHHHHHHHHHTCGGGCEEEEEETTTEEEEECSSSSSSCCCTTSCSCBCCCCCCSSCC
T ss_pred EEEEEeCCCcEEEEEccCCCcHHHHHHHHHHhcCccCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCcccccccccccC
Confidence 79999999999999999999999999999999999999999999999999999999888999999999999999778999
Q ss_pred ccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccCeEEEEEeec
Q psy7836 83 VRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEYRKRINYEGA 156 (189)
Q Consensus 83 ~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~i~I~~~~~~ 156 (189)
+++|+|+|||.++++++|||||++.+++|||++|+|||+|+ ||++ |++|++++++.+++|.++|+|.+|.+.
T Consensus 93 ~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdv--v~kI~~~~t~~~~~P~~~V~I~~~~v~ 165 (203)
T 2k7n_A 93 TGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGM--VNRVGMVETNSQDRPVDDVKIIKAYPS 165 (203)
T ss_dssp CSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHH--HHHHHSCCEEETTEECCCCBEEEEEEC
T ss_pred CCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHH--HHHHHcCCcCCCCCcCCCeEEEEEEEE
Confidence 88999999999999999999999999999999999999999 9988 999999999988999999999997764
No 11
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=9.5e-49 Score=319.23 Aligned_cols=154 Identities=55% Similarity=0.930 Sum_probs=145.7
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCccCCceEEEeecCcEEecCCCCCCCCCCCccc--CCCCCCcccCCc
Q psy7836 3 AVLLKTSVGDIDIELWSREAPKACRNFVQLCMEGYYNNTIIHRVVKGFIAQGGDPTGTGTGGESIY--GKPFKDEIHSRL 80 (189)
Q Consensus 3 ~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~rv~~~~~iqgGd~~~~~~~~~~~~--g~~~~~E~~~~l 80 (189)
+|+|+|++|+|+||||++.||+||+||++||+.|||+|+.||||+|+|||||||+.+++.+++++| |+.|++|..+.+
T Consensus 23 ~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydgt~FhRVi~~FmiQgGdp~~~G~Gg~si~~~g~~f~dE~~~~l 102 (232)
T 3bkp_A 23 KVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGTGRGGADTTFDGKPFDVETHPRL 102 (232)
T ss_dssp EEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHHTTTTTCBEEEEETTTEEEECCTTSSSSCCCCCTTTTCCBCCCCCTTC
T ss_pred EEEEEECCCcEEEEEcCCCCcHHHHHHHHHhhcCccCCCEEEEEeCCCEEEcCCCCCCCCCCCccccCCCccCCccccCc
Confidence 799999999999999999999999999999999999999999999999999999999999999999 899999998889
Q ss_pred ccccceEEEEeccCC--------------CCCCceEEEEcCCCCCCCCCCeEEEEEEcCcchhhhhhhhcccCCCCCccc
Q psy7836 81 RFVRRGLVAMANAGK--------------DDNGSQFFFTLAATPELNSKHTIFGKVAGDTIYNMIKLDEIMVDHVSTYLE 146 (189)
Q Consensus 81 ~~~~~G~vsm~~~~~--------------~~~~sqFfI~l~~~~~ld~~~~vFG~V~G~~v~~l~~i~~~~~~~~~~P~~ 146 (189)
+|+++|+|||||.++ ++++|||||++.+++|||++|+|||+|+|++++++++|++++++.+++|.+
T Consensus 103 ~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vvg~~v~~v~kI~~~~t~~~~~P~~ 182 (232)
T 3bkp_A 103 KFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVTGHTLYNLMKFNDLEVGKEDRPMT 182 (232)
T ss_dssp CCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEECGGGHHHHHHHTTSCBCGGGCBSS
T ss_pred CcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEEeCchHHHHHHHcCCcCCCCCcCC
Confidence 999999999999987 599999999999999999999999999988888889999999999999999
Q ss_pred CeEEEEEeec
Q psy7836 147 YRKRINYEGA 156 (189)
Q Consensus 147 ~i~I~~~~~~ 156 (189)
+|+|.+|.+.
T Consensus 183 ~i~I~~~~vl 192 (232)
T 3bkp_A 183 PPFIKSVDVL 192 (232)
T ss_dssp CCBEEEEEEE
T ss_pred CeEEEEEEEE
Confidence 9999997764
No 12
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=6.3e-49 Score=309.48 Aligned_cols=153 Identities=39% Similarity=0.691 Sum_probs=142.2
Q ss_pred CcEEEEEecceeEEEEEcCCCChHHHHHHHHHHh-----------cCccCCceEEEeecCcEEecCCCC-CCCCCCCccc
Q psy7836 1 MQAVLLKTSVGDIDIELWSREAPKACRNFVQLCM-----------EGYYNNTIIHRVVKGFIAQGGDPT-GTGTGGESIY 68 (189)
Q Consensus 1 ~~~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~-----------~g~Y~g~~f~rv~~~~~iqgGd~~-~~~~~~~~~~ 68 (189)
||..+..|++|+|+||||++.||+||+||++||+ .++|+|+.||||+|+|||||||+. +++.+++++|
T Consensus 14 ~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~ 93 (179)
T 2wfi_A 14 FDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIY 93 (179)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCCTT
T ss_pred EEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCCCCCCCccc
Confidence 3455667899999999999999999999999997 568999999999999999999985 7888999999
Q ss_pred CCCCCCcccCCcccccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccC
Q psy7836 69 GKPFKDEIHSRLRFVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEY 147 (189)
Q Consensus 69 g~~~~~E~~~~l~~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~ 147 (189)
+..|++|.. .++|+++|+|||||.++++++|||||++.++||||++|+|||+|+ |+++ +++|++++++.+++|.++
T Consensus 94 g~~f~dE~~-~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dv--v~~I~~~~t~~~~~P~~~ 170 (179)
T 2wfi_A 94 GGFFEDESF-AVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEV--VREIENQKTDAASKPFAE 170 (179)
T ss_dssp SSCBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTCCBCTTSCBSSC
T ss_pred CCccccccc-CcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHH--HHHHHcCCCCCCCCCCCC
Confidence 999999987 689999999999999999999999999999999999999999999 9988 999999999999999999
Q ss_pred eEEEEEeecccc
Q psy7836 148 RKRINYEGAGKV 159 (189)
Q Consensus 148 i~I~~~~~~g~l 159 (189)
|+|.+ ||+|
T Consensus 171 v~I~~---~G~l 179 (179)
T 2wfi_A 171 VRILS---CGEL 179 (179)
T ss_dssp EEEEE---EEEC
T ss_pred eEEEe---CeeC
Confidence 99998 6643
No 13
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=1.6e-48 Score=306.82 Aligned_cols=149 Identities=41% Similarity=0.712 Sum_probs=139.2
Q ss_pred EEEecceeEEEEEcCCCChHHHHHHHHHHhc--------C---ccCCceEEEeecCcEEecCCCC-CCCCCCCcccCCCC
Q psy7836 5 LLKTSVGDIDIELWSREAPKACRNFVQLCME--------G---YYNNTIIHRVVKGFIAQGGDPT-GTGTGGESIYGKPF 72 (189)
Q Consensus 5 ~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~~--------g---~Y~g~~f~rv~~~~~iqgGd~~-~~~~~~~~~~g~~~ 72 (189)
+-.|++|+|+||||++.||+||+||++||++ | +|+|+.||||+|+|||||||+. +++++++++|+..|
T Consensus 15 i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f 94 (177)
T 1a58_A 15 IDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGMF 94 (177)
T ss_dssp ETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSSCCCCTTSSCB
T ss_pred ECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCCCCCcccCCcc
Confidence 3446899999999999999999999999985 4 8999999999999999999985 78889999999999
Q ss_pred CCcccCCcccccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccCeEEE
Q psy7836 73 KDEIHSRLRFVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEYRKRI 151 (189)
Q Consensus 73 ~~E~~~~l~~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~i~I~ 151 (189)
++|.. .++|+++|+|||||.++++++|||||++.++||||++|+|||+|+ |+++ +++|++++++.+++|.++|+|.
T Consensus 95 ~dE~~-~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dv--v~~I~~~~~~~~~~P~~~v~I~ 171 (177)
T 1a58_A 95 DDEEF-VMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEV--VTKIEYLKTNSKNRPLADVVIL 171 (177)
T ss_dssp CCCCC-CSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTSCBCTTSCBSSCEEEE
T ss_pred cCccc-CcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHH--HHHHHhCCCCCCCcCCCCeEEE
Confidence 99987 689999999999999999999999999999999999999999999 9988 9999999999999999999999
Q ss_pred EEeecccc
Q psy7836 152 NYEGAGKV 159 (189)
Q Consensus 152 ~~~~~g~l 159 (189)
+ ||+|
T Consensus 172 ~---~G~l 176 (177)
T 1a58_A 172 N---CGEL 176 (177)
T ss_dssp E---EEEE
T ss_pred E---eEEE
Confidence 8 6654
No 14
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=5e-48 Score=306.78 Aligned_cols=148 Identities=43% Similarity=0.693 Sum_probs=139.1
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHHH---------------hcCccCCceEEEeecCcEEecCCCCCCCCCCCcc
Q psy7836 3 AVLLKTSVGDIDIELWSREAPKACRNFVQLC---------------MEGYYNNTIIHRVVKGFIAQGGDPTGTGTGGESI 67 (189)
Q Consensus 3 ~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~---------------~~g~Y~g~~f~rv~~~~~iqgGd~~~~~~~~~~~ 67 (189)
+|+|+|+.|+|+||||++.||+||+||++|| +.+||+|+.||||+|+|||||||+.+++.++
T Consensus 25 ~v~l~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~g~G~gg--- 101 (191)
T 1w74_A 25 TATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGG--- 101 (191)
T ss_dssp EEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTTSSSSCC---
T ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCCCCCCCC---
Confidence 6899999999999999999999999999999 4589999999999999999999998877776
Q ss_pred cCCCCCCcccCCcccccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE---cCcchhhhhhhhcccCCCCCc
Q psy7836 68 YGKPFKDEIHSRLRFVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA---GDTIYNMIKLDEIMVDHVSTY 144 (189)
Q Consensus 68 ~g~~~~~E~~~~l~~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~---G~~v~~l~~i~~~~~~~~~~P 144 (189)
+|+.|++|..+.++|+++|+|||||.+|++++|||||++.++||||++|+|||+|+ ||++ |++|++++++.+++|
T Consensus 102 ~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdv--v~~I~~~~t~~~~~P 179 (191)
T 1w74_A 102 PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRV--VEAISKTATDGNDRP 179 (191)
T ss_dssp SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHH--HHHHHTSCBCTTSCB
T ss_pred CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHH--HHHHHcCCcCCCCCc
Confidence 48899999777899999999999999999999999999999999999999999998 6777 999999999999999
Q ss_pred ccCeEEEEEee
Q psy7836 145 LEYRKRINYEG 155 (189)
Q Consensus 145 ~~~i~I~~~~~ 155 (189)
.++|+|.+|.+
T Consensus 180 ~~~v~I~~~~i 190 (191)
T 1w74_A 180 TDPVVIESITI 190 (191)
T ss_dssp SSCCEEEEEEE
T ss_pred CCCeEEEEEEE
Confidence 99999999765
No 15
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=1.3e-48 Score=307.15 Aligned_cols=151 Identities=38% Similarity=0.644 Sum_probs=141.3
Q ss_pred EEEEE-----ecceeEEEEEcCCCChHHHHHHHHHHhcCc--------cCCceEEEeecCcEEecCCCC-CCCCCCCccc
Q psy7836 3 AVLLK-----TSVGDIDIELWSREAPKACRNFVQLCMEGY--------YNNTIIHRVVKGFIAQGGDPT-GTGTGGESIY 68 (189)
Q Consensus 3 ~v~~~-----T~~G~i~ieL~~~~aP~t~~nF~~L~~~g~--------Y~g~~f~rv~~~~~iqgGd~~-~~~~~~~~~~ 68 (189)
+|.|+ |+.|+|+||||++.||+||+||++||++++ |+|+.|||++|+||+||||+. +++.+++++|
T Consensus 12 ~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~ 91 (177)
T 1mzw_A 12 VVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIY 91 (177)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCCCCCTT
T ss_pred EEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCCCCccC
Confidence 46666 579999999999999999999999999998 999999999999999999985 7888999999
Q ss_pred CCCCCCcccCCcccccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccC
Q psy7836 69 GKPFKDEIHSRLRFVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEY 147 (189)
Q Consensus 69 g~~~~~E~~~~l~~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~ 147 (189)
++.|++|.. .++|+++|+|||||.++++++|||||++.+++|||++|+|||+|+ |+++ +++|++++++.+++|.++
T Consensus 92 g~~f~dE~~-~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dv--v~~I~~~~t~~~~~P~~~ 168 (177)
T 1mzw_A 92 RGPFADENF-KLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLV--MRKIENVPTGPNNKPKLP 168 (177)
T ss_dssp SSCBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTSCBCGGGCBSSC
T ss_pred CCcccCccc-ccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHH--HHHHHhCCcCCCCCCCCC
Confidence 999999976 789999999999999999999999999999999999999999999 9988 999999999999999999
Q ss_pred eEEEEEeecccc
Q psy7836 148 RKRINYEGAGKV 159 (189)
Q Consensus 148 i~I~~~~~~g~l 159 (189)
|+|.+ ||+|
T Consensus 169 v~I~~---cG~l 177 (177)
T 1mzw_A 169 VVISQ---CGEM 177 (177)
T ss_dssp EEEEE---EEEC
T ss_pred EEEEe---ceeC
Confidence 99998 6643
No 16
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-48 Score=308.86 Aligned_cols=153 Identities=41% Similarity=0.682 Sum_probs=142.3
Q ss_pred CcEEEEEecceeEEEEEcCCCChHHHHHHHHHHh-----------cCccCCceEEEeecCcEEecCCCC-CCCCCCCccc
Q psy7836 1 MQAVLLKTSVGDIDIELWSREAPKACRNFVQLCM-----------EGYYNNTIIHRVVKGFIAQGGDPT-GTGTGGESIY 68 (189)
Q Consensus 1 ~~~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~-----------~g~Y~g~~f~rv~~~~~iqgGd~~-~~~~~~~~~~ 68 (189)
||..+..|++|+|+||||++.||+||+||++||+ .++|+|+.||||+|+|||||||+. +++.+++++|
T Consensus 24 ~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~G~gg~siy 103 (192)
T 2he9_A 24 FDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIY 103 (192)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCCTT
T ss_pred EEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCCCCCCCccc
Confidence 3455667899999999999999999999999996 468999999999999999999985 7888999999
Q ss_pred CCCCCCcccCCcccccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccC
Q psy7836 69 GKPFKDEIHSRLRFVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEY 147 (189)
Q Consensus 69 g~~~~~E~~~~l~~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~ 147 (189)
|..|++|+. .++|+++|+|||||.++++++|||||++.++||||++|+|||+|+ |+++ |++|++++++.+++|.++
T Consensus 104 g~~f~dE~~-~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdv--v~~I~~~~t~~~~~P~~~ 180 (192)
T 2he9_A 104 GGYFKDENF-ILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEV--IEQIENLKTDAASRPYAD 180 (192)
T ss_dssp SSCBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTSCBCTTSCBSSC
T ss_pred CCcccCccc-cCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHH--HHHHHcCCcCCCCCCcCC
Confidence 999999987 689999999999999999999999999999999999999999999 9988 999999999999999999
Q ss_pred eEEEEEeecccc
Q psy7836 148 RKRINYEGAGKV 159 (189)
Q Consensus 148 i~I~~~~~~g~l 159 (189)
|+|.+ ||+|
T Consensus 181 v~I~~---~g~l 189 (192)
T 2he9_A 181 VRVID---CGVL 189 (192)
T ss_dssp EEEEE---EEEC
T ss_pred eEEEE---eEEE
Confidence 99998 6654
No 17
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=1.3e-48 Score=305.55 Aligned_cols=149 Identities=38% Similarity=0.713 Sum_probs=139.4
Q ss_pred CcEEEEEecceeEEEEEcCCCChHHHHHHHHHH--hcCc-cCCceEEEeecCcEEecCC-CCCCCCCCCcccCCCCCCcc
Q psy7836 1 MQAVLLKTSVGDIDIELWSREAPKACRNFVQLC--MEGY-YNNTIIHRVVKGFIAQGGD-PTGTGTGGESIYGKPFKDEI 76 (189)
Q Consensus 1 ~~~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~--~~g~-Y~g~~f~rv~~~~~iqgGd-~~~~~~~~~~~~g~~~~~E~ 76 (189)
||..+..|++|+|+||||++.||+||+||++|| +.|| |+|+.|||++|+||+|||| +.+++.+++++|+++|++|.
T Consensus 16 ~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~ 95 (172)
T 2haq_A 16 FDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGKSIYGEKFADEN 95 (172)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCCSSSSCBCCCC
T ss_pred EEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCCCccccCCcccCcC
Confidence 355667799999999999999999999999999 6799 9999999999999999999 56788899999999999996
Q ss_pred cCCcccccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccCeEEEEE
Q psy7836 77 HSRLRFVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEYRKRINY 153 (189)
Q Consensus 77 ~~~l~~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~i~I~~~ 153 (189)
. .++|. +|+|||||.++++++|||||++.++++||++|+|||+|+ ||++ +++|++++++..++|.++|+|.+|
T Consensus 96 ~-~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dv--v~~I~~~~t~~~~~P~~~v~I~~~ 169 (172)
T 2haq_A 96 L-NVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDV--VLRIEKTKTNSHDRPVKPVKIVAS 169 (172)
T ss_dssp C-CSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTSCBCGGGCBSSCEEEEEE
T ss_pred C-CcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHH--HHHHHhCCcCCCCcCCCCeEEEEe
Confidence 5 79997 999999999999999999999999999999999999999 9988 999999999988899999999983
No 18
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=1.3e-47 Score=300.22 Aligned_cols=150 Identities=38% Similarity=0.674 Sum_probs=139.2
Q ss_pred EEEEE-----ecceeEEEEEcCCCChHHHHHHHHHHhc--Cc-cCCceEEEeecCcEEecCCCC-CCCCCCCcccCCCCC
Q psy7836 3 AVLLK-----TSVGDIDIELWSREAPKACRNFVQLCME--GY-YNNTIIHRVVKGFIAQGGDPT-GTGTGGESIYGKPFK 73 (189)
Q Consensus 3 ~v~~~-----T~~G~i~ieL~~~~aP~t~~nF~~L~~~--g~-Y~g~~f~rv~~~~~iqgGd~~-~~~~~~~~~~g~~~~ 73 (189)
+|.|+ |++|+|+||||++.||+||+||++||++ || |+|+.||||+|+||+||||+. +++++++++|+..|+
T Consensus 12 ~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~g~~f~ 91 (172)
T 2cmt_A 12 RVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFD 91 (172)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBC
T ss_pred EEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCCCCccCCCccc
Confidence 46666 8999999999999999999999999984 88 999999999999999999986 678889999999999
Q ss_pred CcccCCcccccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccCeEEEE
Q psy7836 74 DEIHSRLRFVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEYRKRIN 152 (189)
Q Consensus 74 ~E~~~~l~~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~i~I~~ 152 (189)
+|.. .++|+++|+|||||.++++++|||||++.+++|||++|+|||+|+ |+++ +++|+++++ .+++|.++|+|.+
T Consensus 92 dE~~-~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dv--v~~I~~~~~-~~~~P~~~v~I~~ 167 (172)
T 2cmt_A 92 DENF-QLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNV--VKKMESVGS-KSGKVKEPVIISR 167 (172)
T ss_dssp CCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHGGGGCC-TTCCCSSCEEEEE
T ss_pred cccc-CcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHH--HHHHHhCCC-CCCCCCCCEEEEE
Confidence 9976 799999999999999999999999999999999999999999999 9988 999999988 5689999999998
Q ss_pred Eeecccc
Q psy7836 153 YEGAGKV 159 (189)
Q Consensus 153 ~~~~g~l 159 (189)
||+|
T Consensus 168 ---~g~l 171 (172)
T 2cmt_A 168 ---CGEL 171 (172)
T ss_dssp ---EEEE
T ss_pred ---eEeE
Confidence 6654
No 19
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=5.6e-48 Score=300.35 Aligned_cols=151 Identities=38% Similarity=0.648 Sum_probs=139.7
Q ss_pred cEEEEEecceeEEEEEcCCCChHHHHHHHHHHh--cCc-cCCceEEEeecCcEEecCC-CCCCCCCCCcccCCCCCCccc
Q psy7836 2 QAVLLKTSVGDIDIELWSREAPKACRNFVQLCM--EGY-YNNTIIHRVVKGFIAQGGD-PTGTGTGGESIYGKPFKDEIH 77 (189)
Q Consensus 2 ~~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~rv~~~~~iqgGd-~~~~~~~~~~~~g~~~~~E~~ 77 (189)
|..+-.|++|+|+||||++.||+||+||++||+ .|+ |+|+.|||++|+|++|||| +..++.+++++|+.++++|..
T Consensus 8 di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~~~dE~~ 87 (164)
T 3pmp_A 8 NISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYGEKFADENF 87 (164)
T ss_dssp EEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCC
T ss_pred EEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCCCcccCCcccccccc
Confidence 334445999999999999999999999999999 788 9999999999999999999 567888999999999999966
Q ss_pred CCcccccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccCeEEEEEeec
Q psy7836 78 SRLRFVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEYRKRINYEGA 156 (189)
Q Consensus 78 ~~l~~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~i~I~~~~~~ 156 (189)
.++|+++|+|||||.++++++|||||++.+++|||++|+|||+|+ ||++ +++|++++++ +++|.++|+|.+ |
T Consensus 88 -~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~v--v~~I~~~~~~-~~~P~~~v~I~~---c 160 (164)
T 3pmp_A 88 -QVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDI--VRKVEGKGSA-SGKTNATIKITD---C 160 (164)
T ss_dssp -CSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTTCCT-TCCCSSCEEEEE---E
T ss_pred -ccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHH--HHHHHhCCCC-CCCcccCEEEEe---C
Confidence 799999999999999999999999999999999999999999999 9988 9999999985 799999999998 6
Q ss_pred ccc
Q psy7836 157 GKV 159 (189)
Q Consensus 157 g~l 159 (189)
|+|
T Consensus 161 g~l 163 (164)
T 3pmp_A 161 GTV 163 (164)
T ss_dssp EEC
T ss_pred eEE
Confidence 655
No 20
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=7.9e-48 Score=299.68 Aligned_cols=146 Identities=37% Similarity=0.641 Sum_probs=136.2
Q ss_pred EecceeEEEEEcCCCChHHHHHHHHHHh--cCc-cCCceEEEeecCcEEecCCCC-CCCCCCCcccCCCCCCcccCCccc
Q psy7836 7 KTSVGDIDIELWSREAPKACRNFVQLCM--EGY-YNNTIIHRVVKGFIAQGGDPT-GTGTGGESIYGKPFKDEIHSRLRF 82 (189)
Q Consensus 7 ~T~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~rv~~~~~iqgGd~~-~~~~~~~~~~g~~~~~E~~~~l~~ 82 (189)
.|++|+|+||||++.||+||+||++||+ .|| |+|+.|||++|+|++||||+. +++++++++|+..|++|.. .++|
T Consensus 14 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~-~l~h 92 (165)
T 2z6w_A 14 GKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENF-TLKH 92 (165)
T ss_dssp TEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCC-CSCC
T ss_pred CEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCCCCcccCCcccCccc-cccc
Confidence 3589999999999999999999999999 899 999999999999999999985 6788889999999999965 7999
Q ss_pred ccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccCeEEEEEeecccc
Q psy7836 83 VRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEYRKRINYEGAGKV 159 (189)
Q Consensus 83 ~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~i~I~~~~~~g~l 159 (189)
.++|+|||||.++++++|||||++.+++|||++|+|||+|+ |+++ +++|+++++ .+++|.++|+|.+ ||+|
T Consensus 93 ~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dv--v~~I~~~~~-~~~~P~~~v~I~~---~g~l 164 (165)
T 2z6w_A 93 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDV--VKKIESFGS-KSGRTSKKIVITD---CGQL 164 (165)
T ss_dssp CSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHHTCC-TTSCCSSCEEEEE---EEEC
T ss_pred CCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHH--HHHHHhCCC-CCCCCCCcEEEEE---eEEE
Confidence 99999999999999999999999999999999999999999 9988 999999985 7899999999998 6654
No 21
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=1.6e-47 Score=299.35 Aligned_cols=150 Identities=41% Similarity=0.725 Sum_probs=139.1
Q ss_pred EEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHh-cCc--------cCCceEEEeecCcEEecCCCC-CCCCCCCcc
Q psy7836 3 AVLLKTS-----VGDIDIELWSREAPKACRNFVQLCM-EGY--------YNNTIIHRVVKGFIAQGGDPT-GTGTGGESI 67 (189)
Q Consensus 3 ~v~~~T~-----~G~i~ieL~~~~aP~t~~nF~~L~~-~g~--------Y~g~~f~rv~~~~~iqgGd~~-~~~~~~~~~ 67 (189)
+|.|+++ +|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+||+||||+. +++++++++
T Consensus 5 ~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si 84 (170)
T 1qng_A 5 KVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGGESI 84 (170)
T ss_dssp EEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSCCCBT
T ss_pred EEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECCCEEEcCCccCCCCCCCccc
Confidence 4666665 9999999999999999999999998 488 999999999999999999985 788889999
Q ss_pred cCCCCCCcccCCcccccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCccc
Q psy7836 68 YGKPFKDEIHSRLRFVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLE 146 (189)
Q Consensus 68 ~g~~~~~E~~~~l~~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~ 146 (189)
|+..|++|.. .++|+++|+|||||.++++++|||||++.+++|||++|+|||+|+ ||++ +++|+++++ .+++|.+
T Consensus 85 ~g~~f~dE~~-~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dv--v~~I~~~~t-~~~~P~~ 160 (170)
T 1qng_A 85 YGRSFTDENF-NMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNV--VREMEKEGA-KSGYVKR 160 (170)
T ss_dssp TBSCBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTTCC-TTCCCSS
T ss_pred cCCccccccc-ccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHH--HHHHHhCCC-CCCCCCC
Confidence 9999999976 789999999999999999999999999999999999999999999 9988 999999999 7899999
Q ss_pred CeEEEEEeecccc
Q psy7836 147 YRKRINYEGAGKV 159 (189)
Q Consensus 147 ~i~I~~~~~~g~l 159 (189)
+|+|.+ ||+|
T Consensus 161 ~v~I~~---cG~l 170 (170)
T 1qng_A 161 SVVITD---CGEL 170 (170)
T ss_dssp CEEEEE---EEEC
T ss_pred CeEEEe---ceeC
Confidence 999998 6643
No 22
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=7.3e-48 Score=305.40 Aligned_cols=149 Identities=44% Similarity=0.720 Sum_probs=139.0
Q ss_pred ecceeEEEEEcCCCChHHHHHHHHHHh--cCc-cCCceEEEeecCcEEecCC-CCCCCCCCCcccCCCCCCcccCCcccc
Q psy7836 8 TSVGDIDIELWSREAPKACRNFVQLCM--EGY-YNNTIIHRVVKGFIAQGGD-PTGTGTGGESIYGKPFKDEIHSRLRFV 83 (189)
Q Consensus 8 T~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~rv~~~~~iqgGd-~~~~~~~~~~~~g~~~~~E~~~~l~~~ 83 (189)
|++|+|+||||++.||+||+||++||+ .|| |+|+.||||+|+||+|||| +.+++.+++++||+.|++|.. .++|+
T Consensus 27 t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~-~l~h~ 105 (188)
T 3ich_A 27 EDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENF-KLKHY 105 (188)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCC-CSCCC
T ss_pred EeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCCCCCccccCCccccccc-CcccC
Confidence 789999999999999999999999996 689 9999999999999999999 567888999999999999965 78999
Q ss_pred cceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccCeEEEEEeeccccccc
Q psy7836 84 RRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEYRKRINYEGAGKVEWG 162 (189)
Q Consensus 84 ~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~i~I~~~~~~g~l~~~ 162 (189)
++|+|||||.++++++|||||++.+++|||++|+|||+|+ ||++ +++|++++++..++|.++|+|.+ |+.+..+
T Consensus 106 ~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dv--v~~I~~~~~~~~~~P~~~v~I~~---~~~l~~~ 180 (188)
T 3ich_A 106 GPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEV--VRKVESTKTDSRDKPLKDVIIAD---CGKIEVE 180 (188)
T ss_dssp STTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTSCBCTTSCBSSCEEEEE---EEEEEEE
T ss_pred CCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHH--HHHHHhCCcCCCCeECCCEEEEE---eEEEecC
Confidence 9999999999999999999999999999999999999999 9988 99999999998899999999998 5555433
No 23
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=3.2e-47 Score=298.34 Aligned_cols=150 Identities=36% Similarity=0.639 Sum_probs=138.4
Q ss_pred EEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHhc--C--------ccCCceEEEeecCcEEecCCCC-CCCCCCCc
Q psy7836 3 AVLLKTS-----VGDIDIELWSREAPKACRNFVQLCME--G--------YYNNTIIHRVVKGFIAQGGDPT-GTGTGGES 66 (189)
Q Consensus 3 ~v~~~T~-----~G~i~ieL~~~~aP~t~~nF~~L~~~--g--------~Y~g~~f~rv~~~~~iqgGd~~-~~~~~~~~ 66 (189)
+|.|+++ +|+|+||||++.||+||+||++||++ | ||+|+.||||+|+||+||||+. ++++++++
T Consensus 5 ~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~s 84 (173)
T 2igv_A 5 KVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGES 84 (173)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCB
T ss_pred EEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCCCCc
Confidence 4566655 99999999999999999999999987 5 7999999999999999999985 67889999
Q ss_pred ccCCCCCCcccCCcccccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcc
Q psy7836 67 IYGKPFKDEIHSRLRFVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYL 145 (189)
Q Consensus 67 ~~g~~~~~E~~~~l~~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~ 145 (189)
+|+.+|++|.. .++|+++|+|||||.+|++++|||||++.++||||++|+|||+|+ |+++ +++|+++++ .+++|.
T Consensus 85 iyg~~f~dE~~-~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dv--v~~I~~~~t-~~~~P~ 160 (173)
T 2igv_A 85 IYGEKFPDENF-KEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDV--VKAVESNGS-QSGKPV 160 (173)
T ss_dssp TTBSCBCCCCC-CSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTTCC-TTSCCS
T ss_pred cCCCcccCccc-ccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHH--HHHHHhCCC-CCCCCC
Confidence 99999999976 799999999999999999999999999999999999999999999 9988 999999988 568999
Q ss_pred cCeEEEEEeecccc
Q psy7836 146 EYRKRINYEGAGKV 159 (189)
Q Consensus 146 ~~i~I~~~~~~g~l 159 (189)
++|+|.+ ||+|
T Consensus 161 ~~v~I~~---~g~l 171 (173)
T 2igv_A 161 KDCMIAD---CGQL 171 (173)
T ss_dssp SCEEEEE---EEEE
T ss_pred CCEEEEE---eEEE
Confidence 9999998 6655
No 24
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=4.3e-47 Score=297.55 Aligned_cols=145 Identities=37% Similarity=0.621 Sum_probs=135.8
Q ss_pred ecceeEEEEEcCCCChHHHHHHHHHHh--cCc-cCCceEEEeecCcEEecCCCC-CCCCCCCcccCCCCCCcccCCcccc
Q psy7836 8 TSVGDIDIELWSREAPKACRNFVQLCM--EGY-YNNTIIHRVVKGFIAQGGDPT-GTGTGGESIYGKPFKDEIHSRLRFV 83 (189)
Q Consensus 8 T~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~rv~~~~~iqgGd~~-~~~~~~~~~~g~~~~~E~~~~l~~~ 83 (189)
|++|+|+||||++.||+||+||++||+ .|+ |+|+.|||++|+||+||||+. +++++++++|+..|++|.. .++|+
T Consensus 23 t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~-~l~h~ 101 (173)
T 2r99_A 23 KPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENF-ILKHT 101 (173)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCC-CSCCC
T ss_pred ccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCCCCccCCCcccCccc-CcccC
Confidence 899999999999999999999999995 687 999999999999999999986 6788899999999999976 78999
Q ss_pred cceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccCeEEEEEeecccc
Q psy7836 84 RRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEYRKRINYEGAGKV 159 (189)
Q Consensus 84 ~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~i~I~~~~~~g~l 159 (189)
++|+|||||.++++++|||||++.+++|||++|+|||+|+ ||++ +++|++++++ +++|.++|+|.+ ||+|
T Consensus 102 ~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dv--v~~I~~~~~~-~~~P~~~v~I~~---cG~l 172 (173)
T 2r99_A 102 GPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDV--LRQIEAQGSK-DGKPKQKVIIAD---CGEY 172 (173)
T ss_dssp SSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTTCCT-TCCCSSCEEEEE---EEEC
T ss_pred CCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHH--HHHHHhCCCC-CCCCCCCeEEEE---eeeE
Confidence 9999999999999999999999999999999999999999 9988 9999998874 589999999998 7754
No 25
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=7.2e-47 Score=299.27 Aligned_cols=149 Identities=44% Similarity=0.699 Sum_probs=139.7
Q ss_pred ecceeEEEEEcCCCChHHHHHHHHHHhc--C-ccCCceEEEeecCcEEecCCCC-CCCCCCCcccCCCCCCcccCCcccc
Q psy7836 8 TSVGDIDIELWSREAPKACRNFVQLCME--G-YYNNTIIHRVVKGFIAQGGDPT-GTGTGGESIYGKPFKDEIHSRLRFV 83 (189)
Q Consensus 8 T~~G~i~ieL~~~~aP~t~~nF~~L~~~--g-~Y~g~~f~rv~~~~~iqgGd~~-~~~~~~~~~~g~~~~~E~~~~l~~~ 83 (189)
|++|+|+||||++.||+||+||++||++ | +|+|+.|||++|+||+||||+. +++.++.++++..+++|.. .++|+
T Consensus 24 ~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~de~~-~~~h~ 102 (185)
T 4fru_A 24 EDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENF-KLKHY 102 (185)
T ss_dssp EEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCC-CSCCC
T ss_pred EecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCccccCCccCcccc-ccCcC
Confidence 4499999999999999999999999976 6 7999999999999999999986 7788999999999999977 78999
Q ss_pred cceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccCeEEEEEeeccccccc
Q psy7836 84 RRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEYRKRINYEGAGKVEWG 162 (189)
Q Consensus 84 ~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~i~I~~~~~~g~l~~~ 162 (189)
++|+|||||.++++++|||||++.+++|||++|+|||+|+ ||++ +++|++++++.+++|.++|+|.+ ||++..+
T Consensus 103 ~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dv--v~~I~~~~t~~~~~P~~~v~I~~---~g~l~~~ 177 (185)
T 4fru_A 103 GPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEV--VRKVETTKTDGRDKPLKDVTIAD---CGKIEVE 177 (185)
T ss_dssp STTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTSCBCTTSCBSSCEEEEE---EEEEEEE
T ss_pred CCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHH--HHHHHhCCCCCCCcCCCCEEEEE---ceEEecC
Confidence 9999999999999999999999999999999999999999 9988 99999999999999999999998 7776654
No 26
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=2.9e-47 Score=296.31 Aligned_cols=148 Identities=30% Similarity=0.464 Sum_probs=135.6
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCccCCceEEEeecCcEEecCCCCCCCCCCCcccCCCCCCcccCCccc
Q psy7836 3 AVLLKTSVGDIDIELWSREAPKACRNFVQLCMEGYYNNTIIHRVVKGFIAQGGDPTGTGTGGESIYGKPFKDEIHSRLRF 82 (189)
Q Consensus 3 ~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~rv~~~~~iqgGd~~~~~~~~~~~~g~~~~~E~~~~l~~ 82 (189)
+|+|+|++|+|+||||++.||+||+||++||+.|||+|+.||||+|+||+||||+... .+.+.++++|++|..+.++|
T Consensus 1 ~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~--~g~~~~g~~~~dE~~~~l~~ 78 (164)
T 1lop_A 1 MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPG--MKQKATKEPIKNEANNGLKN 78 (164)
T ss_dssp CEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEECCEEETTTEEEESSEETT--TEECCCCCCBCCCCCSSCCC
T ss_pred CEEEEeCCCCEEEEEeCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCceEecCCcccC--CCcCCCCCcccccccccccc
Confidence 4899999999999999999999999999999999999999999999999999998632 24567789999999877877
Q ss_pred ccceEEEEec-cCCCCCCceEEEEcCCCCCCCCC--------CeEEEEEE-cCcchhhhhhhhcccCC----CCCcccCe
Q psy7836 83 VRRGLVAMAN-AGKDDNGSQFFFTLAATPELNSK--------HTIFGKVA-GDTIYNMIKLDEIMVDH----VSTYLEYR 148 (189)
Q Consensus 83 ~~~G~vsm~~-~~~~~~~sqFfI~l~~~~~ld~~--------~~vFG~V~-G~~v~~l~~i~~~~~~~----~~~P~~~i 148 (189)
.+|+||||| .+|++++|||||++.+++|||++ |+|||+|+ ||++ +++|++++++. +++|.++|
T Consensus 79 -~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dv--v~~I~~~~t~~~~~~~~~P~~~v 155 (164)
T 1lop_A 79 -TRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDE--VDKIKGVATGRSGMHQDVPKEDV 155 (164)
T ss_dssp -CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHH--HHHHHTSCEEEETTEEEEESSCC
T ss_pred -CccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHH--HHHHHhCCcCCccccCCCcCCCe
Confidence 799999997 47999999999999999999998 99999999 9988 99999999875 58999999
Q ss_pred EEEEEee
Q psy7836 149 KRINYEG 155 (189)
Q Consensus 149 ~I~~~~~ 155 (189)
+|.+|++
T Consensus 156 ~I~~~~v 162 (164)
T 1lop_A 156 IIESVTV 162 (164)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999765
No 27
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=6.4e-47 Score=295.20 Aligned_cols=148 Identities=28% Similarity=0.380 Sum_probs=135.8
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCccCCceEEEeecCcEEecCCCCCCCCCCCcccCCCCCCcccCCccc
Q psy7836 3 AVLLKTSVGDIDIELWSREAPKACRNFVQLCMEGYYNNTIIHRVVKGFIAQGGDPTGTGTGGESIYGKPFKDEIHSRLRF 82 (189)
Q Consensus 3 ~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~rv~~~~~iqgGd~~~~~~~~~~~~g~~~~~E~~~~l~~ 82 (189)
+|+|+|++|+|+||||++.||+||+||++||++|||+|+.|||++|+|||||||++... +...++.++++|..+.++|
T Consensus 5 ~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~--~~~~~~~~~~~E~~~~l~~ 82 (167)
T 3s6m_A 5 MVELHTNHGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVINGFMIQGGGFEPGL--KQKPTDAPIANEANNGLKN 82 (167)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEESSEETTT--EECCCCCCBCCCGGGCCCC
T ss_pred EEEEEeCCceEEEEEeCCCCcHHHHHHHHHhhhcccCCCEeEEecCCcEEEeccccCCC--CCCCCCCccCCcccccccC
Confidence 69999999999999999999999999999999999999999999999999999986542 2234578899998777776
Q ss_pred ccceEEEEec-cCCCCCCceEEEEcCCCCCCCCC--------CeEEEEEE-cCcchhhhhhhhcccCC----CCCcccCe
Q psy7836 83 VRRGLVAMAN-AGKDDNGSQFFFTLAATPELNSK--------HTIFGKVA-GDTIYNMIKLDEIMVDH----VSTYLEYR 148 (189)
Q Consensus 83 ~~~G~vsm~~-~~~~~~~sqFfI~l~~~~~ld~~--------~~vFG~V~-G~~v~~l~~i~~~~~~~----~~~P~~~i 148 (189)
.+|+||||| .+|++++|||||++.+++|||++ |+|||+|+ ||++ +++|++++++. +++|.++|
T Consensus 83 -~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dv--v~~I~~~~t~~~~~~~~~P~~~v 159 (167)
T 3s6m_A 83 -DTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDI--VDKIKAVKTGSKGFHQDVPNDDV 159 (167)
T ss_dssp -CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHH--HHHHTTSCBBC---CBTCBSSCC
T ss_pred -CccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHH--HHHHHcCCcCCCcccCCCcCCCe
Confidence 899999999 68999999999999999999998 99999999 9988 99999999987 68999999
Q ss_pred EEEEEee
Q psy7836 149 KRINYEG 155 (189)
Q Consensus 149 ~I~~~~~ 155 (189)
+|.+|++
T Consensus 160 ~I~~~~i 166 (167)
T 3s6m_A 160 VIEKAVV 166 (167)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999875
No 28
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=1.7e-46 Score=292.49 Aligned_cols=149 Identities=35% Similarity=0.512 Sum_probs=135.0
Q ss_pred cEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCccCCceEEEeecCcEEecCCCCCCCCCCCcccCCCCCCcccCCcc
Q psy7836 2 QAVLLKTSVGDIDIELWSREAPKACRNFVQLCMEGYYNNTIIHRVVKGFIAQGGDPTGTGTGGESIYGKPFKDEIHSRLR 81 (189)
Q Consensus 2 ~~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~rv~~~~~iqgGd~~~~~~~~~~~~g~~~~~E~~~~l~ 81 (189)
.+|+|+|++|+|+||||++.||+||+||++||+.|||+|+.||||+|+|||||||+...+. ...++.+|++|..+.++
T Consensus 5 ~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~--~~~~g~~~~dE~~~~l~ 82 (166)
T 1v9t_A 5 PHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQ--QKKPNPPIKNEADNGLR 82 (166)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEESSBCTTCC--BCCCCCCBCCCGGGSCC
T ss_pred eEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhccCCCCCCEEEEEECCcEEEcCCcCcCCC--CCCCCCccccccccccc
Confidence 4799999999999999999999999999999999999999999999999999999975432 23457889999876665
Q ss_pred cccceEEEEecc-CCCCCCceEEEEcCCCCCCCCC-----CeEEEEEE-cCcchhhhhhhhcccCC----CCCcccCeEE
Q psy7836 82 FVRRGLVAMANA-GKDDNGSQFFFTLAATPELNSK-----HTIFGKVA-GDTIYNMIKLDEIMVDH----VSTYLEYRKR 150 (189)
Q Consensus 82 ~~~~G~vsm~~~-~~~~~~sqFfI~l~~~~~ld~~-----~~vFG~V~-G~~v~~l~~i~~~~~~~----~~~P~~~i~I 150 (189)
| .+|+|||||. +|++++|||||++.+++|||++ |+|||+|+ ||++ +++|++++++. .++|.++|+|
T Consensus 83 ~-~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dv--v~~I~~~~~~~~~~~~~~P~~~v~I 159 (166)
T 1v9t_A 83 N-TRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDV--ADKISQVPTHDVGPYQNVPSKPVVI 159 (166)
T ss_dssp C-CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHH--HHHHHTSCEEEETTEEEEESSCCBE
T ss_pred C-CceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHH--HHHHHhCCCCCCCccCCCcCCCeEE
Confidence 4 8999999996 6999999999999999999998 99999999 9988 99999999876 4799999999
Q ss_pred EEEee
Q psy7836 151 INYEG 155 (189)
Q Consensus 151 ~~~~~ 155 (189)
.+|++
T Consensus 160 ~~~~v 164 (166)
T 1v9t_A 160 LSATV 164 (166)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99875
No 29
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=2.6e-46 Score=295.90 Aligned_cols=147 Identities=38% Similarity=0.625 Sum_probs=135.8
Q ss_pred EEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHh--cCc--------cCCceEEEeecCcEEecCCCC-CCCCCCCc
Q psy7836 3 AVLLKTS-----VGDIDIELWSREAPKACRNFVQLCM--EGY--------YNNTIIHRVVKGFIAQGGDPT-GTGTGGES 66 (189)
Q Consensus 3 ~v~~~T~-----~G~i~ieL~~~~aP~t~~nF~~L~~--~g~--------Y~g~~f~rv~~~~~iqgGd~~-~~~~~~~~ 66 (189)
+|.|+++ .|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+|||||||+. ++++++++
T Consensus 21 ~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G~gg~s 100 (186)
T 2poy_A 21 VVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGTGGES 100 (186)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCC
T ss_pred EEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCCCCCCCc
Confidence 4666654 9999999999999999999999997 588 999999999999999999985 67889999
Q ss_pred ccCCCCCCcccCCcccccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcc
Q psy7836 67 IYGKPFKDEIHSRLRFVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYL 145 (189)
Q Consensus 67 ~~g~~~~~E~~~~l~~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~ 145 (189)
+|++.|++|.. .++|+++|+|||||.+|++++|||||++.++||||++|+|||+|+ ||++ |++|+++++ .+++|.
T Consensus 101 i~g~~f~dE~~-~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdv--v~~I~~~~t-~~~~P~ 176 (186)
T 2poy_A 101 IYGSKFRDENF-VYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEV--VKSIEKCGS-QNGKPT 176 (186)
T ss_dssp TTC-CBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHHTCC-TTSCCS
T ss_pred cCCCcccCccc-ccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHH--HHHHHhCCC-CCCCCC
Confidence 99999999986 799999999999999999999999999999999999999999999 9988 999999988 678999
Q ss_pred cCeEEEEE
Q psy7836 146 EYRKRINY 153 (189)
Q Consensus 146 ~~i~I~~~ 153 (189)
++|+|.+|
T Consensus 177 ~~v~I~~c 184 (186)
T 2poy_A 177 KSVCITAS 184 (186)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEeC
Confidence 99999984
No 30
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=5.6e-46 Score=293.75 Aligned_cols=150 Identities=36% Similarity=0.635 Sum_probs=139.2
Q ss_pred EEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHhcCc---cCCceEEEeecCcEEecCCC-CCCCCCCCcccCCCCC
Q psy7836 3 AVLLKTS-----VGDIDIELWSREAPKACRNFVQLCMEGY---YNNTIIHRVVKGFIAQGGDP-TGTGTGGESIYGKPFK 73 (189)
Q Consensus 3 ~v~~~T~-----~G~i~ieL~~~~aP~t~~nF~~L~~~g~---Y~g~~f~rv~~~~~iqgGd~-~~~~~~~~~~~g~~~~ 73 (189)
+|.|+++ +|+|+||||++.||+||+||++||++++ |+|+.|||++|+|++||||+ .+++.++.++|+..++
T Consensus 24 ~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~~~ 103 (184)
T 3rdd_A 24 TVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFE 103 (184)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBC
T ss_pred EEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCCCCcccCCCccc
Confidence 6788877 9999999999999999999999997655 99999999999999999995 5778889999999999
Q ss_pred CcccCCcccccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcccCeEEEE
Q psy7836 74 DEIHSRLRFVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYLEYRKRIN 152 (189)
Q Consensus 74 ~E~~~~l~~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~~~i~I~~ 152 (189)
+|.. .++|+++|+|||||.++++++|||||++.++++||++|+|||+|+ ||++ |++|+++++ .+++|.++|+|.+
T Consensus 104 de~~-~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dv--v~~I~~~~~-~~g~P~~~v~I~~ 179 (184)
T 3rdd_A 104 DENF-ILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNI--VEAMERFGS-RNGKTSKKITIAD 179 (184)
T ss_dssp CCCC-CSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTTCC-TTSCCSSCEEEEE
T ss_pred Cccc-ccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHH--HHHHHhcCC-CCCCCcCCeEEEe
Confidence 9987 689999999999999999999999999999999999999999999 9988 999999886 5799999999998
Q ss_pred Eeecccc
Q psy7836 153 YEGAGKV 159 (189)
Q Consensus 153 ~~~~g~l 159 (189)
||+|
T Consensus 180 ---cG~l 183 (184)
T 3rdd_A 180 ---CGQL 183 (184)
T ss_dssp ---EEEC
T ss_pred ---CeEE
Confidence 7755
No 31
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=1.4e-46 Score=294.46 Aligned_cols=147 Identities=39% Similarity=0.717 Sum_probs=108.6
Q ss_pred EecceeEEEEEcCCCChHHHHHHHHHHh--cCc-cCCceEEEeecCcEEecCC-CCCCCCCCCcccCCCCCCcccCCccc
Q psy7836 7 KTSVGDIDIELWSREAPKACRNFVQLCM--EGY-YNNTIIHRVVKGFIAQGGD-PTGTGTGGESIYGKPFKDEIHSRLRF 82 (189)
Q Consensus 7 ~T~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~rv~~~~~iqgGd-~~~~~~~~~~~~g~~~~~E~~~~l~~ 82 (189)
.|++|+|+||||++.||+||+||++||+ .|+ |+|+.|||++|+||+|||| +.+++.+++++|+++|++|.. .++|
T Consensus 18 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~-~~~h 96 (172)
T 2c3b_A 18 ETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTGGRSIYGDKFADENF-SRKH 96 (172)
T ss_dssp CCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC-----------------------CHHH
T ss_pred ecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCCCcccCCCcccCccc-cccc
Confidence 4888999999999999999999999999 678 9999999999999999999 678888999999999999965 7899
Q ss_pred ccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE---cCcchhhhhhhhcccCCCC-CcccCeEEEEEeeccc
Q psy7836 83 VRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA---GDTIYNMIKLDEIMVDHVS-TYLEYRKRINYEGAGK 158 (189)
Q Consensus 83 ~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~---G~~v~~l~~i~~~~~~~~~-~P~~~i~I~~~~~~g~ 158 (189)
+++|+|||||.++++++|||||++.++||||++|+|||+|+ ||++ +++|++++++..+ +|.++|+|.+ ||+
T Consensus 97 ~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dv--v~~I~~~~t~~~~~~P~~~v~I~~---cG~ 171 (172)
T 2c3b_A 97 DKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSV--VKEIEALGSSSGSVRSNTRPKIVN---CGE 171 (172)
T ss_dssp HHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHH--HHHHHTTCCTTSCCCSSSCCEEEE---EEE
T ss_pred CCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHH--HHHHHhCCCCCCCccCCCCeEEEe---Cee
Confidence 99999999999999999999999999999999999999997 5666 9999999997655 9999999998 664
Q ss_pred c
Q psy7836 159 V 159 (189)
Q Consensus 159 l 159 (189)
|
T Consensus 172 l 172 (172)
T 2c3b_A 172 L 172 (172)
T ss_dssp C
T ss_pred C
Confidence 3
No 32
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=7.7e-46 Score=301.07 Aligned_cols=151 Identities=34% Similarity=0.596 Sum_probs=139.7
Q ss_pred EEEEEe-----cceeEEEEEcCCCChHHHHHHHHHHhcC--------ccCCceEEEeecCcEEecCCCC-CCCCCCCccc
Q psy7836 3 AVLLKT-----SVGDIDIELWSREAPKACRNFVQLCMEG--------YYNNTIIHRVVKGFIAQGGDPT-GTGTGGESIY 68 (189)
Q Consensus 3 ~v~~~T-----~~G~i~ieL~~~~aP~t~~nF~~L~~~g--------~Y~g~~f~rv~~~~~iqgGd~~-~~~~~~~~~~ 68 (189)
+|.|++ ++|+|+||||++.||+||+||++||+++ +|+|+.||||+|+|||||||+. +++.+++++|
T Consensus 61 ~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~Gg~siy 140 (229)
T 1z81_A 61 VVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGSGSLSIY 140 (229)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSCCCCBTT
T ss_pred EEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCCCCCccC
Confidence 566765 4999999999999999999999999987 7999999999999999999985 7888999999
Q ss_pred CCCCCCcccCCcccccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE---cCcchhhhhhhhcccCCC-CCc
Q psy7836 69 GKPFKDEIHSRLRFVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA---GDTIYNMIKLDEIMVDHV-STY 144 (189)
Q Consensus 69 g~~~~~E~~~~l~~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~---G~~v~~l~~i~~~~~~~~-~~P 144 (189)
++.|++|+. .++|+++|+|||||.++++++|||||++.+++|||++|+|||+|+ |+++ |++|++++++.+ ++|
T Consensus 141 g~~f~dE~~-~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdV--v~~I~~~~t~~~~~~P 217 (229)
T 1z81_A 141 GEKFDDENF-DIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLL--LKKIENVSVTPYIYKP 217 (229)
T ss_dssp BSCCCCCCC-CSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHH--HHHHHHSCBCTTTCCB
T ss_pred CCccccccc-ccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHH--HHHHHhCCCCCCCCCC
Confidence 999999976 799999999999999999999999999999999999999999999 6776 999999999887 999
Q ss_pred ccCeEEEEEeecccc
Q psy7836 145 LEYRKRINYEGAGKV 159 (189)
Q Consensus 145 ~~~i~I~~~~~~g~l 159 (189)
.++|+|.+ ||+|
T Consensus 218 ~~~V~I~~---cG~l 229 (229)
T 1z81_A 218 KIPINVVE---CGEL 229 (229)
T ss_dssp SSCEEEEE---EEEC
T ss_pred CCCeEEEe---CeeC
Confidence 99999998 6643
No 33
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=9.1e-46 Score=294.47 Aligned_cols=146 Identities=38% Similarity=0.656 Sum_probs=136.2
Q ss_pred ecceeEEEEEcCCCChHHHHHHHHHHh--cCc-cCCceEEEeecCcEEecCCC-CCCCCCCCcccCCCCCCcccCCcccc
Q psy7836 8 TSVGDIDIELWSREAPKACRNFVQLCM--EGY-YNNTIIHRVVKGFIAQGGDP-TGTGTGGESIYGKPFKDEIHSRLRFV 83 (189)
Q Consensus 8 T~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~rv~~~~~iqgGd~-~~~~~~~~~~~g~~~~~E~~~~l~~~ 83 (189)
|++|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+|++||||+ ..++.++.++|+..+++|.. .++|+
T Consensus 39 t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~-~l~h~ 117 (193)
T 3k2c_A 39 ESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDENF-ELKHT 117 (193)
T ss_dssp EEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSSCBCCCCC-CSCCC
T ss_pred EEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCcccCCCccccccc-ccccC
Confidence 789999999999999999999999999 677 99999999999999999995 56788899999999999966 78999
Q ss_pred cceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCcc--cCeEEEEEeeccccc
Q psy7836 84 RRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTYL--EYRKRINYEGAGKVE 160 (189)
Q Consensus 84 ~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P~--~~i~I~~~~~~g~l~ 160 (189)
++|+|||||.++++++|||||++.++++||++|+|||+|+ |+++ |++|++++++ +++|. ++|+|.+ ||+|.
T Consensus 118 ~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdv--v~~I~~~~t~-~g~P~~~~~v~I~~---cG~l~ 191 (193)
T 3k2c_A 118 KEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDV--VHKIAKYGSE-SGQVKKGYRIEIRD---CGVLG 191 (193)
T ss_dssp STTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTTCCT-TCCCCTTCCEEEEE---EEECC
T ss_pred CCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHH--HHHHHhcCCC-CCcCccCccEEEEE---ceEeC
Confidence 9999999999999999999999999999999999999999 9988 9999999986 68999 9999998 66554
No 34
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=4.8e-45 Score=297.87 Aligned_cols=168 Identities=20% Similarity=0.299 Sum_probs=134.5
Q ss_pred EEEEE-----ecceeEEEEEcCCCChHHHHHHHHHHhc-----------------C--c-cCCceEEEeecCcEEecCC-
Q psy7836 3 AVLLK-----TSVGDIDIELWSREAPKACRNFVQLCME-----------------G--Y-YNNTIIHRVVKGFIAQGGD- 56 (189)
Q Consensus 3 ~v~~~-----T~~G~i~ieL~~~~aP~t~~nF~~L~~~-----------------g--~-Y~g~~f~rv~~~~~iqgGd- 56 (189)
+|.++ |++|+|+||||++.||+||+||++||++ | | |+|+.||||+|+|||||||
T Consensus 16 ~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQgGd~ 95 (234)
T 2ose_A 16 RVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVSGDI 95 (234)
T ss_dssp EEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEECCC
T ss_pred EEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEcCCc
Confidence 45555 9999999999999999999999999984 4 7 9999999999999999999
Q ss_pred CCCCCCCCCcccCCC-----CCCcccCCcccccceEEEEec----cCCCCCCceEEEEcCC------CCCCCCCCeEEEE
Q psy7836 57 PTGTGTGGESIYGKP-----FKDEIHSRLRFVRRGLVAMAN----AGKDDNGSQFFFTLAA------TPELNSKHTIFGK 121 (189)
Q Consensus 57 ~~~~~~~~~~~~g~~-----~~~E~~~~l~~~~~G~vsm~~----~~~~~~~sqFfI~l~~------~~~ld~~~~vFG~ 121 (189)
+.+++++++++||+. |+ + . .++|+++|+||||| .++++++|||||++.+ ++|||++|+|||+
T Consensus 96 ~~g~G~Gg~siyg~~~~p~~f~-~-~-~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tVFG~ 172 (234)
T 2ose_A 96 YNSNGSSAGTVYCDEPIPPVFG-D-Y-FYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVVIGQ 172 (234)
T ss_dssp C----CCCCCTTTTCCBCCCCC-S-C-CCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEEEEE
T ss_pred cCCCCCCCccccCCccCccccc-C-c-CccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeEEEE
Confidence 468889999999987 66 3 2 68999999999999 8999999999999999 9999999999999
Q ss_pred EE-cCcchhhhhhhhcccCCCCCcccCeEEEEEeeccccccccccccCCceeeccCC
Q psy7836 122 VA-GDTIYNMIKLDEIMVDHVSTYLEYRKRINYEGAGKVEWGERAANIGVTLYNTNT 177 (189)
Q Consensus 122 V~-G~~v~~l~~i~~~~~~~~~~P~~~i~I~~~~~~g~l~~~~~~~~~~~~~~~~~~ 177 (189)
|+ ||++ |++|++++++.+++|.++|+|.+|.+-.. ..+.+++.++++.-.++
T Consensus 173 Vv~GmdV--v~~I~~~~t~~~~~P~~~V~I~~~~~l~~--p~~~~~k~~~~~~~~~~ 225 (234)
T 2ose_A 173 VYGGLDV--LDKINSMIKPYAGRKYPTFSIGKCGAYLD--SSQAQRKRPVNVNGTKR 225 (234)
T ss_dssp EEECHHH--HHHHHHHTCCCTTCCCCCEEEEEEEECCC--HHHHCC-----------
T ss_pred EeCCHHH--HHHHHhCCcCCCCCccCCEEEEEEEEecC--Ccccccccccccccchh
Confidence 99 9988 99999999999999999999999654431 11222444555555444
No 35
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=3.8e-43 Score=302.89 Aligned_cols=150 Identities=39% Similarity=0.662 Sum_probs=140.8
Q ss_pred EEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHhc--------C---ccCCceEEEeecCcEEecCCCC-CCCCCCC
Q psy7836 3 AVLLKTS-----VGDIDIELWSREAPKACRNFVQLCME--------G---YYNNTIIHRVVKGFIAQGGDPT-GTGTGGE 65 (189)
Q Consensus 3 ~v~~~T~-----~G~i~ieL~~~~aP~t~~nF~~L~~~--------g---~Y~g~~f~rv~~~~~iqgGd~~-~~~~~~~ 65 (189)
+|.|+|+ .|+|+|+||++.||+||+||++||++ | +|+|+.||||+|+|||||||++ ++|+|++
T Consensus 17 ~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g~~ 96 (370)
T 1ihg_A 17 RVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGE 96 (370)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCC
T ss_pred eEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCCCC
Confidence 5888877 89999999999999999999999997 6 6999999999999999999997 7899999
Q ss_pred cccCCCCCCcccCCcccccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEE-cCcchhhhhhhhcccCCCCCc
Q psy7836 66 SIYGKPFKDEIHSRLRFVRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVA-GDTIYNMIKLDEIMVDHVSTY 144 (189)
Q Consensus 66 ~~~g~~~~~E~~~~l~~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~-G~~v~~l~~i~~~~~~~~~~P 144 (189)
++||..|++|.. .++|+++|+|||+|.+|++++|||||++.++||||++|+|||+|+ |+++ +++|++++++. ++|
T Consensus 97 ~~~~~~~~~e~~-~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v--~~~i~~~~~~~-~~P 172 (370)
T 1ihg_A 97 SIYGEKFEDENF-HYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGV--AKILENVEVKG-EKP 172 (370)
T ss_dssp BTTBSCBCCCCC-CBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH--HHHHHTSCEET-TEE
T ss_pred CCCCCCcCCCcC-CcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHH--HHHHHcCCCCC-Ccc
Confidence 999999999987 689999999999999999999999999999999999999999999 9988 89999999877 999
Q ss_pred ccCeEEEEEeec
Q psy7836 145 LEYRKRINYEGA 156 (189)
Q Consensus 145 ~~~i~I~~~~~~ 156 (189)
..+|+|.+|.+.
T Consensus 173 ~~~v~I~~~g~l 184 (370)
T 1ihg_A 173 AKLCVIAECGEL 184 (370)
T ss_dssp SSCEEEEEEEEE
T ss_pred ceeEEEEEEEEe
Confidence 999999996543
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=3e-39 Score=277.51 Aligned_cols=148 Identities=26% Similarity=0.379 Sum_probs=127.0
Q ss_pred EEEEEec--------ceeEEEEEcCCCChHHHHHHHHHHhcCccCCceEEEeecCcEEecCCCCCCCCC-----------
Q psy7836 3 AVLLKTS--------VGDIDIELWSREAPKACRNFVQLCMEGYYNNTIIHRVVKGFIAQGGDPTGTGTG----------- 63 (189)
Q Consensus 3 ~v~~~T~--------~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~rv~~~~~iqgGd~~~~~~~----------- 63 (189)
.|.++|+ .|+|+|+||++.||+||+||++||+.|||+|+.|||+ ++||+||||+++++.|
T Consensus 172 ~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~GfYdGt~FHRV-~gFmIQgGDp~g~G~G~~~~~~g~~~~ 250 (369)
T 3rfy_A 172 SVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRS-DGFVVQTGDPEGPAEGFIDPSTEKTRT 250 (369)
T ss_dssp EEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTTTTTTEECEEE-EEEEECCCCCCCCCSCCCSCCCCCCCS
T ss_pred EEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcCCcCCCeeeee-CCeeEecCCCCCCCCCccCcccCcCcc
Confidence 5788887 9999999999999999999999999999999999999 9999999999876655
Q ss_pred ----------CCcccCCCCCCcc----cCCcccccceEEEEecc--CCCCCCceEEEEc-------CCCCCCCCCCeEEE
Q psy7836 64 ----------GESIYGKPFKDEI----HSRLRFVRRGLVAMANA--GKDDNGSQFFFTL-------AATPELNSKHTIFG 120 (189)
Q Consensus 64 ----------~~~~~g~~~~~E~----~~~l~~~~~G~vsm~~~--~~~~~~sqFfI~l-------~~~~~ld~~~~vFG 120 (189)
+.++|+..+++|. .+.++|+.+|+|||||+ ++++++|||||++ .+.+|||++|+|||
T Consensus 251 iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~~LDgkytVFG 330 (369)
T 3rfy_A 251 VPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGRYAVFG 330 (369)
T ss_dssp SSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCSSSCSCEEEEE
T ss_pred cCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCCcccCCCeeEEE
Confidence 3456777777764 34688999999999998 8999999999999 46899999999999
Q ss_pred EEE-cCcchhhhhhhhcccCCCCCcccCeEEEEEeeccccccccc
Q psy7836 121 KVA-GDTIYNMIKLDEIMVDHVSTYLEYRKRINYEGAGKVEWGER 164 (189)
Q Consensus 121 ~V~-G~~v~~l~~i~~~~~~~~~~P~~~i~I~~~~~~g~l~~~~~ 164 (189)
+|+ ||++ +++|++.. +|.++++...++.-++
T Consensus 331 ~VveGmdV--VdkI~~GD-----------~I~sv~I~~g~~~l~~ 362 (369)
T 3rfy_A 331 YVTDNEDF--LADLKVGD-----------VIESIQVVSGLENLAN 362 (369)
T ss_dssp EEEESTTG--GGGCCTTC-----------EEEEEEEEECGGGEES
T ss_pred EEecCHHH--HHHHhCCC-----------ceEEEEEecCCccccC
Confidence 999 9998 88888741 4777777665555433
No 37
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=69.74 E-value=3.9 Score=30.43 Aligned_cols=31 Identities=16% Similarity=0.355 Sum_probs=26.5
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHHH
Q psy7836 3 AVLLKTSVGDIDIELWSREAPKACRNFVQLC 33 (189)
Q Consensus 3 ~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~ 33 (189)
++.|.-.-..++++|+.+.||+|++.|+++.
T Consensus 31 ~I~i~~~~~~~~a~L~D~~aP~Ta~~f~~~L 61 (153)
T 2nnz_A 31 RLRIRFESAECEVELYEEWAPETVRAIADAL 61 (153)
T ss_dssp CEEEEETTEEEEECCCTTSCHHHHHHHHHTC
T ss_pred EEEEEECCEEEEEEEcCCCCHHHHHHHHHhC
Confidence 3566667788999999999999999999975
No 38
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=61.08 E-value=8.4 Score=29.55 Aligned_cols=38 Identities=18% Similarity=0.214 Sum_probs=26.8
Q ss_pred eEEEEEcCCCChHHHHHHHHHHh------cCccCCceEEEeecC
Q psy7836 12 DIDIELWSREAPKACRNFVQLCM------EGYYNNTIIHRVVKG 49 (189)
Q Consensus 12 ~i~ieL~~~~aP~t~~nF~~L~~------~g~Y~g~~f~rv~~~ 49 (189)
.++.+|..+.||+||+.|.++.= ...|.|-.++-..|.
T Consensus 34 ~~~A~Lldd~APkTcaA~~~~LP~~~~viHarwSGeeVy~~lp~ 77 (188)
T 3kop_A 34 TCKALLLDDVAPRTSKAVWDALPQSSQVFHGKYARNEIYNLVPA 77 (188)
T ss_dssp EEEEEECTTTSHHHHHHHHHHCCEEEECEECSSSSSEEEEEEEC
T ss_pred EEEEEEccccChHHHHHHHHhCCCCcceEEEEEecceEEEECCc
Confidence 47899999999999999999751 123555555544443
No 39
>2khf_A PLNJ; anti-microbial, bacteriocin, peptide, two-peptide, antimicrobial protein; NMR {Lactobacillus plantarum} PDB: 2khg_A
Probab=55.34 E-value=3.3 Score=20.80 Aligned_cols=15 Identities=27% Similarity=0.645 Sum_probs=13.0
Q ss_pred HHHHHHHhcCccCCc
Q psy7836 27 RNFVQLCMEGYYNNT 41 (189)
Q Consensus 27 ~nF~~L~~~g~Y~g~ 41 (189)
.||..-.+.|||+|-
T Consensus 4 knfwsslrkgfydge 18 (26)
T 2khf_A 4 KNFWSSLRKGFYDGE 18 (26)
T ss_dssp HHHHHHHHHHHTTTH
T ss_pred HHHHHHHHhhcccch
Confidence 689999999999984
No 40
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=42.22 E-value=21 Score=30.43 Aligned_cols=51 Identities=18% Similarity=0.375 Sum_probs=39.1
Q ss_pred ccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEEcCcchhhhhhh
Q psy7836 83 VRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVAGDTIYNMIKLD 134 (189)
Q Consensus 83 ~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~G~~v~~l~~i~ 134 (189)
-++|.|.+.|.....-..+.-|++.+.| -|++.-|.|+|...++..|+-|.
T Consensus 326 r~rGdItIdN~~ygRY~GElQI~l~dlp-~d~r~NVVG~I~~edl~LLd~I~ 376 (385)
T 1x7f_A 326 QERGQVVIGNNSFGKYKGELQIILKEMP-IDERKNIVGTIAEEELFLLDYVG 376 (385)
T ss_dssp BCTTEEEEECGGGGGGTTCEEEECSCBC-CCTTEEEEEEECGGGGGGGGGCC
T ss_pred ccCCcEEEeCCCccccccEeeEEcccCC-CCCCeeEEEEECHHHHHHHHhcC
Confidence 3789999998765555678999999987 57888999999955554455544
No 41
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=39.72 E-value=21 Score=30.39 Aligned_cols=51 Identities=14% Similarity=0.113 Sum_probs=39.1
Q ss_pred ccceEEEEeccCCCCCCceEEEEcCCCCCCCCCCeEEEEEEcCcchhhhhhh
Q psy7836 83 VRRGLVAMANAGKDDNGSQFFFTLAATPELNSKHTIFGKVAGDTIYNMIKLD 134 (189)
Q Consensus 83 ~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~V~G~~v~~l~~i~ 134 (189)
-++|.|.+.|.....-..+.-|++.+.| -|++.-|.|+|...++..|+-|.
T Consensus 300 r~rGdItIdN~~ygrY~GElQI~l~dlp-~d~r~NVVG~I~~edl~LLd~I~ 350 (372)
T 2p0o_A 300 RPVGTVTIDNEKYGRYMGEIQVTLVDLP-KDEKVNTITRIIDKDQTILPLIK 350 (372)
T ss_dssp BCTTEEEEECGGGGGGTTCEEEESSCBC-CCTTEEEEEEBCGGGGGGGGGCC
T ss_pred ccCCeEEEeCCCccccccEeeEEcccCC-CCCCeEEEEEECHHHHHHHHhcC
Confidence 3789999998765555678999999988 58889999999955554455443
No 42
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=28.21 E-value=1.7e+02 Score=21.01 Aligned_cols=91 Identities=20% Similarity=0.152 Sum_probs=52.7
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHHHh----cCccCCceEEEeecCcEEecCCCCCCCCCCCcccCCCCCC-ccc
Q psy7836 3 AVLLKTSVGDIDIELWSREAPKACRNFVQLCM----EGYYNNTIIHRVVKGFIAQGGDPTGTGTGGESIYGKPFKD-EIH 77 (189)
Q Consensus 3 ~v~~~T~~G~i~ieL~~~~aP~t~~nF~~L~~----~g~Y~g~~f~rv~~~~~iqgGd~~~~~~~~~~~~g~~~~~-E~~ 77 (189)
+|.+-.....+..+|+. .|.|++.|++..= -..|. ..++-..|.. ++. |..
T Consensus 14 ~~~~~~~~~~v~a~L~D--np~Ta~~~~~~LPl~~~~~~~g-~E~y~~~p~~---------------------l~~~e~~ 69 (136)
T 1zx8_A 14 RVELLFESGKCVIDLNE--EYEVVKLLKEKIPFESVVNTWG-EEIYFSTPVN---------------------VQKMENP 69 (136)
T ss_dssp EEEEECSSCEEEEEEET--TSHHHHHHHHHCSEEEECEESS-SEEEEECSCC---------------------CCCCSSE
T ss_pred EEEEeeCCcEEEEEEcC--CHHHHHHHHHHCCcEEEHHHhC-CcEEEECCcc---------------------CCCCCCC
Confidence 45566677889999974 4889999998761 12242 3333333321 111 111
Q ss_pred CCcccccceEEEEeccCCCCCCceEEEEcCCCCCCCC------CCeEEEEEE-c
Q psy7836 78 SRLRFVRRGLVAMANAGKDDNGSQFFFTLAATPELNS------KHTIFGKVA-G 124 (189)
Q Consensus 78 ~~l~~~~~G~vsm~~~~~~~~~sqFfI~l~~~~~ld~------~~~vFG~V~-G 124 (189)
... ...|-|+.-..+. .|-|-.++.|...+ .-.+||||. |
T Consensus 70 -~~~-~~~GDIaYw~pgg-----~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~ 116 (136)
T 1zx8_A 70 -REV-VEIGDVGYWPPGK-----ALCLFFGKTPMSDDKIQPASAVNVIGKIVEG 116 (136)
T ss_dssp -ESS-BCTTEEEEEGGGT-----EEEEESSCCTTCSSSBCCSSCEEEEEEEEEC
T ss_pred -Ccc-CCCCcEEEeCCCC-----EEEEEeCCCccccCccccCcCcEEEEEEccC
Confidence 111 3667777655433 47777777654433 257999999 5
No 43
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=27.92 E-value=28 Score=17.72 Aligned_cols=13 Identities=38% Similarity=0.457 Sum_probs=9.4
Q ss_pred CCCceEEEEcCCC
Q psy7836 97 DNGSQFFFTLAAT 109 (189)
Q Consensus 97 ~~~sqFfI~l~~~ 109 (189)
.-.|..||+|.+-
T Consensus 8 R~aSSvFITLapp 20 (26)
T 2k9u_B 8 RVASSVFITLAPP 20 (26)
T ss_dssp SCEEEEEEEECCS
T ss_pred heeeeEEEEecCc
Confidence 3457789999863
Done!