Query psy7837
Match_columns 299
No_of_seqs 322 out of 3613
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 20:08:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7837.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7837hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1r18_A Protein-L-isoaspartate( 99.9 1.2E-23 4.3E-28 177.5 13.5 189 11-267 34-227 (227)
2 1i1n_A Protein-L-isoaspartate 99.9 3E-22 1E-26 168.8 16.2 198 12-277 28-225 (226)
3 3lbf_A Protein-L-isoaspartate 99.9 1.9E-22 6.4E-27 168.0 14.6 182 12-270 26-207 (210)
4 2pbf_A Protein-L-isoaspartate 99.9 1.8E-22 6.1E-27 170.2 13.8 186 10-269 29-226 (227)
5 1jg1_A PIMT;, protein-L-isoasp 99.9 3.3E-22 1.1E-26 169.7 15.3 189 11-273 39-227 (235)
6 2yxe_A Protein-L-isoaspartate 99.9 1.9E-21 6.5E-26 162.5 15.0 187 10-270 24-210 (215)
7 1dl5_A Protein-L-isoaspartate 99.8 9.5E-20 3.3E-24 161.4 14.5 189 10-270 17-211 (317)
8 1vbf_A 231AA long hypothetical 99.8 1.9E-19 6.6E-24 151.9 12.1 182 11-270 16-199 (231)
9 3njr_A Precorrin-6Y methylase; 99.6 5.7E-15 1.9E-19 122.3 15.6 105 128-237 52-158 (204)
10 4gek_A TRNA (CMO5U34)-methyltr 99.6 1.6E-15 5.5E-20 130.4 12.2 115 54-235 57-180 (261)
11 3e05_A Precorrin-6Y C5,15-meth 99.6 1.4E-14 4.7E-19 119.7 15.9 104 128-236 37-145 (204)
12 4df3_A Fibrillarin-like rRNA/T 99.6 4.6E-15 1.6E-19 124.5 12.4 115 52-234 61-183 (233)
13 1pjz_A Thiopurine S-methyltran 99.6 1.4E-15 4.8E-20 125.9 9.0 105 129-233 20-140 (203)
14 1nkv_A Hypothetical protein YJ 99.6 9.2E-15 3.1E-19 124.9 13.8 104 126-234 31-141 (256)
15 1vl5_A Unknown conserved prote 99.6 7.3E-15 2.5E-19 125.9 12.8 102 128-234 34-141 (260)
16 3mti_A RRNA methylase; SAM-dep 99.6 1.1E-14 3.9E-19 118.2 13.0 103 128-235 19-137 (185)
17 2b25_A Hypothetical protein; s 99.6 8.1E-15 2.8E-19 130.6 12.9 146 34-236 74-222 (336)
18 3fpf_A Mtnas, putative unchara 99.6 2.1E-14 7.2E-19 124.2 14.6 104 125-235 116-224 (298)
19 2gb4_A Thiopurine S-methyltran 99.6 6.4E-15 2.2E-19 125.9 10.3 104 130-233 67-191 (252)
20 3kkz_A Uncharacterized protein 99.6 2.8E-14 9.5E-19 122.8 14.4 108 124-235 39-152 (267)
21 3hm2_A Precorrin-6Y C5,15-meth 99.6 2.6E-14 8.9E-19 115.1 13.2 106 127-237 21-131 (178)
22 3f4k_A Putative methyltransfer 99.6 2.6E-14 8.9E-19 122.1 13.8 109 123-235 38-152 (257)
23 1xxl_A YCGJ protein; structura 99.6 2.4E-14 8.2E-19 121.3 13.2 108 123-235 13-126 (239)
24 2pwy_A TRNA (adenine-N(1)-)-me 99.6 2.4E-14 8.4E-19 122.3 13.2 125 44-236 75-201 (258)
25 4hg2_A Methyltransferase type 99.6 1.3E-14 4.4E-19 124.4 10.9 95 131-236 39-138 (257)
26 3ofk_A Nodulation protein S; N 99.6 1.5E-14 5.2E-19 120.4 11.0 104 124-235 44-156 (216)
27 3hem_A Cyclopropane-fatty-acyl 99.6 5.1E-14 1.7E-18 123.5 14.7 106 124-236 65-186 (302)
28 3ujc_A Phosphoethanolamine N-m 99.6 2.6E-14 8.9E-19 122.5 12.6 103 126-235 50-161 (266)
29 3dh0_A SAM dependent methyltra 99.6 5.6E-14 1.9E-18 117.1 14.0 113 55-235 27-145 (219)
30 1i9g_A Hypothetical protein RV 99.6 4.1E-14 1.4E-18 122.6 13.4 129 40-236 74-206 (280)
31 3vc1_A Geranyl diphosphate 2-C 99.5 4.8E-14 1.6E-18 124.3 13.6 105 127-235 113-223 (312)
32 3p9n_A Possible methyltransfer 99.5 4.4E-14 1.5E-18 115.3 12.3 103 130-237 43-157 (189)
33 3eey_A Putative rRNA methylase 99.5 6.3E-14 2.1E-18 115.0 13.2 107 64-235 19-141 (197)
34 3bus_A REBM, methyltransferase 99.5 6.6E-14 2.3E-18 120.7 13.7 106 126-235 56-168 (273)
35 3mb5_A SAM-dependent methyltra 99.5 1E-13 3.5E-18 118.4 14.6 125 44-236 72-197 (255)
36 3mgg_A Methyltransferase; NYSG 99.5 4.3E-14 1.5E-18 122.1 12.3 112 119-235 25-144 (276)
37 2o57_A Putative sarcosine dime 99.5 9.4E-14 3.2E-18 121.3 14.6 104 128-235 79-189 (297)
38 2ift_A Putative methylase HI07 99.5 5.7E-14 2E-18 115.9 12.5 102 131-237 53-167 (201)
39 2yqz_A Hypothetical protein TT 99.5 6E-14 2E-18 120.1 12.9 102 127-234 35-142 (263)
40 3dtn_A Putative methyltransfer 99.5 7.2E-14 2.5E-18 117.7 13.0 103 126-236 39-151 (234)
41 2xvm_A Tellurite resistance pr 99.5 9E-14 3.1E-18 113.9 13.2 101 128-234 29-137 (199)
42 3jwh_A HEN1; methyltransferase 99.5 7.1E-14 2.4E-18 116.5 12.6 106 129-234 27-142 (217)
43 3id6_C Fibrillarin-like rRNA/T 99.5 1.1E-13 3.9E-18 116.3 13.9 118 50-235 58-183 (232)
44 3evz_A Methyltransferase; NYSG 99.5 1.4E-13 4.9E-18 115.6 14.5 103 128-236 52-182 (230)
45 2p7i_A Hypothetical protein; p 99.5 4.9E-14 1.7E-18 119.4 11.6 100 128-237 39-145 (250)
46 3dlc_A Putative S-adenosyl-L-m 99.5 5.8E-14 2E-18 116.6 11.8 103 128-235 41-150 (219)
47 3g5l_A Putative S-adenosylmeth 99.5 7.4E-14 2.5E-18 119.1 12.6 101 127-235 40-147 (253)
48 1dus_A MJ0882; hypothetical pr 99.5 2.5E-13 8.5E-18 110.5 14.9 104 128-237 49-161 (194)
49 1yzh_A TRNA (guanine-N(7)-)-me 99.5 1.5E-13 5.2E-18 114.4 13.6 101 131-236 41-159 (214)
50 3hnr_A Probable methyltransfer 99.5 1.3E-13 4.5E-18 114.9 13.2 97 130-236 44-148 (220)
51 3ou2_A SAM-dependent methyltra 99.5 1.4E-13 4.7E-18 114.4 13.2 103 124-236 39-149 (218)
52 2p8j_A S-adenosylmethionine-de 99.5 1E-13 3.5E-18 114.6 12.1 106 125-236 17-131 (209)
53 1nt2_A Fibrillarin-like PRE-rR 99.5 1.5E-13 5.1E-18 114.3 13.1 101 65-234 55-162 (210)
54 3jwg_A HEN1, methyltransferase 99.5 1.1E-13 3.8E-18 115.4 12.4 101 130-234 28-142 (219)
55 1kpg_A CFA synthase;, cyclopro 99.5 2.5E-13 8.5E-18 118.0 14.8 104 126-236 59-171 (287)
56 3m70_A Tellurite resistance pr 99.5 1.8E-13 6.3E-18 118.9 13.6 98 130-234 119-224 (286)
57 3lpm_A Putative methyltransfer 99.5 1.1E-13 3.9E-18 118.7 12.0 106 128-237 45-180 (259)
58 3l8d_A Methyltransferase; stru 99.5 1.5E-13 5.1E-18 116.2 12.6 101 129-237 51-157 (242)
59 3dmg_A Probable ribosomal RNA 99.5 2.1E-13 7.2E-18 123.2 14.2 102 130-237 232-344 (381)
60 1ve3_A Hypothetical protein PH 99.5 3.6E-13 1.2E-17 112.7 14.7 100 130-235 37-144 (227)
61 4htf_A S-adenosylmethionine-de 99.5 1E-13 3.6E-18 120.4 11.8 101 131-235 68-175 (285)
62 3g07_A 7SK snRNA methylphospha 99.5 1E-13 3.5E-18 121.1 11.7 106 130-235 45-222 (292)
63 3thr_A Glycine N-methyltransfe 99.5 3.3E-14 1.1E-18 123.9 8.1 105 130-235 56-177 (293)
64 2kw5_A SLR1183 protein; struct 99.5 1.9E-13 6.6E-18 112.5 12.3 102 129-237 28-135 (202)
65 2fpo_A Methylase YHHF; structu 99.5 2.2E-13 7.5E-18 112.5 12.6 102 131-237 54-164 (202)
66 1o54_A SAM-dependent O-methylt 99.5 1.3E-13 4.5E-18 119.4 11.8 122 47-236 94-216 (277)
67 3bkw_A MLL3908 protein, S-aden 99.5 1.8E-13 6.1E-18 115.7 12.3 101 127-235 39-146 (243)
68 3sm3_A SAM-dependent methyltra 99.5 3.2E-13 1.1E-17 113.5 13.6 108 129-236 28-144 (235)
69 2fca_A TRNA (guanine-N(7)-)-me 99.5 1.6E-13 5.4E-18 114.3 11.5 101 131-236 38-156 (213)
70 3iv6_A Putative Zn-dependent a 99.5 2.1E-13 7.3E-18 116.6 12.3 103 126-237 40-152 (261)
71 3e23_A Uncharacterized protein 99.5 1.2E-13 4.2E-18 114.5 10.5 98 128-237 40-145 (211)
72 2pxx_A Uncharacterized protein 99.5 3E-13 1E-17 112.0 12.6 101 129-236 40-162 (215)
73 1l3i_A Precorrin-6Y methyltran 99.5 2.4E-13 8.3E-18 110.4 11.9 105 128-236 30-137 (192)
74 2frn_A Hypothetical protein PH 99.5 1.5E-13 5.1E-18 119.2 11.1 102 129-235 123-227 (278)
75 3lcc_A Putative methyl chlorid 99.5 1.1E-13 3.8E-18 116.7 10.1 101 131-236 66-174 (235)
76 2fk8_A Methoxy mycolic acid sy 99.5 5.5E-13 1.9E-17 117.7 14.8 107 124-237 83-198 (318)
77 1xdz_A Methyltransferase GIDB; 99.5 1.5E-13 5.2E-18 116.5 10.8 102 130-236 69-177 (240)
78 3ntv_A MW1564 protein; rossman 99.5 1.2E-13 4.2E-18 116.5 10.1 100 130-233 70-176 (232)
79 3g89_A Ribosomal RNA small sub 99.5 1.6E-13 5.3E-18 117.1 10.8 102 130-236 79-187 (249)
80 3gu3_A Methyltransferase; alph 99.5 3.1E-13 1.1E-17 117.5 12.9 103 126-235 17-128 (284)
81 3dxy_A TRNA (guanine-N(7)-)-me 99.5 9.4E-14 3.2E-18 116.2 9.1 102 131-237 34-154 (218)
82 1y8c_A S-adenosylmethionine-de 99.5 2.7E-13 9.1E-18 114.7 12.0 100 130-236 36-145 (246)
83 1zx0_A Guanidinoacetate N-meth 99.5 1.3E-13 4.3E-18 116.6 9.9 99 130-234 59-171 (236)
84 2bm8_A Cephalosporin hydroxyla 99.5 1E-13 3.5E-18 117.4 9.2 127 34-233 49-187 (236)
85 1ri5_A MRNA capping enzyme; me 99.5 4.9E-13 1.7E-17 116.5 13.8 104 129-236 62-177 (298)
86 3g5t_A Trans-aconitate 3-methy 99.5 5.4E-13 1.8E-17 116.7 13.9 100 130-232 35-148 (299)
87 3tma_A Methyltransferase; thum 99.5 3.8E-13 1.3E-17 120.6 13.1 113 119-236 191-320 (354)
88 3h2b_A SAM-dependent methyltra 99.5 1.4E-13 4.7E-18 113.4 9.4 97 132-238 42-146 (203)
89 3dr5_A Putative O-methyltransf 99.5 1.5E-13 5.3E-18 115.1 9.8 118 50-233 38-163 (221)
90 3tfw_A Putative O-methyltransf 99.5 5.3E-13 1.8E-17 113.8 13.3 103 128-234 60-171 (248)
91 2ex4_A Adrenal gland protein A 99.5 2.3E-13 8E-18 115.2 10.9 103 129-236 77-188 (241)
92 2fhp_A Methylase, putative; al 99.5 4E-13 1.4E-17 108.9 11.9 106 129-238 42-159 (187)
93 3a27_A TYW2, uncharacterized p 99.5 3.8E-13 1.3E-17 116.2 12.4 104 127-236 115-222 (272)
94 3grz_A L11 mtase, ribosomal pr 99.5 4.2E-13 1.4E-17 110.8 12.0 101 129-236 58-162 (205)
95 1wzn_A SAM-dependent methyltra 99.5 8.9E-13 3E-17 112.2 14.4 100 129-235 39-147 (252)
96 3g2m_A PCZA361.24; SAM-depende 99.5 4.7E-13 1.6E-17 117.1 13.0 100 132-237 83-194 (299)
97 2esr_A Methyltransferase; stru 99.5 3.4E-13 1.2E-17 108.6 11.2 106 129-238 29-143 (177)
98 2fyt_A Protein arginine N-meth 99.5 7.5E-13 2.5E-17 118.0 14.3 107 119-230 52-168 (340)
99 1yb2_A Hypothetical protein TA 99.5 4.8E-13 1.6E-17 115.8 12.6 118 50-236 95-214 (275)
100 3kr9_A SAM-dependent methyltra 99.5 6.4E-13 2.2E-17 110.9 12.4 111 58-234 6-120 (225)
101 2p35_A Trans-aconitate 2-methy 99.5 5.2E-13 1.8E-17 114.0 12.0 98 128-236 30-135 (259)
102 3ege_A Putative methyltransfer 99.5 1.8E-13 6.1E-18 117.5 9.2 97 128-236 31-133 (261)
103 3lec_A NADB-rossmann superfami 99.5 6.5E-13 2.2E-17 111.1 12.2 112 58-235 12-127 (230)
104 1ixk_A Methyltransferase; open 99.4 7.2E-13 2.5E-17 116.9 13.2 106 65-236 116-249 (315)
105 3duw_A OMT, O-methyltransferas 99.4 3.2E-13 1.1E-17 113.0 10.4 104 128-235 55-169 (223)
106 3ccf_A Cyclopropane-fatty-acyl 99.4 7.3E-13 2.5E-17 114.7 12.9 99 128-237 54-158 (279)
107 1xtp_A LMAJ004091AAA; SGPP, st 99.4 5.6E-13 1.9E-17 113.5 12.0 101 128-235 90-199 (254)
108 4dcm_A Ribosomal RNA large sub 99.4 7.2E-13 2.5E-17 119.5 13.3 106 129-237 220-338 (375)
109 1ws6_A Methyltransferase; stru 99.4 1.9E-13 6.4E-18 109.2 8.4 102 131-238 41-152 (171)
110 3m33_A Uncharacterized protein 99.4 3.6E-13 1.2E-17 113.1 10.3 93 130-232 47-141 (226)
111 2yvl_A TRMI protein, hypotheti 99.4 2.2E-12 7.4E-17 109.5 15.2 110 123-236 83-193 (248)
112 3orh_A Guanidinoacetate N-meth 99.4 1.7E-13 5.9E-18 115.9 8.2 98 130-233 59-170 (236)
113 3q7e_A Protein arginine N-meth 99.4 7.4E-13 2.5E-17 118.5 12.6 106 121-231 56-171 (349)
114 1jsx_A Glucose-inhibited divis 99.4 1.8E-12 6E-17 107.1 14.1 100 131-236 65-168 (207)
115 3pfg_A N-methyltransferase; N, 99.4 1.3E-12 4.5E-17 112.0 13.7 93 130-233 49-151 (263)
116 2ozv_A Hypothetical protein AT 99.4 5.4E-13 1.9E-17 114.5 10.9 105 128-236 33-173 (260)
117 4hc4_A Protein arginine N-meth 99.4 6.1E-13 2.1E-17 119.4 11.6 108 118-231 70-187 (376)
118 3tr6_A O-methyltransferase; ce 99.4 1.9E-13 6.6E-18 114.5 7.8 104 128-235 61-176 (225)
119 2hnk_A SAM-dependent O-methylt 99.4 3.4E-13 1.2E-17 114.2 9.4 121 46-233 41-181 (239)
120 3gnl_A Uncharacterized protein 99.4 1.1E-12 3.6E-17 110.7 12.2 112 58-235 12-127 (244)
121 3ocj_A Putative exported prote 99.4 4.2E-13 1.4E-17 117.8 10.0 105 127-236 114-230 (305)
122 3dli_A Methyltransferase; PSI- 99.4 2.7E-13 9.2E-18 114.8 8.5 101 125-238 35-145 (240)
123 1nv8_A HEMK protein; class I a 99.4 1.3E-12 4.4E-17 113.6 12.9 101 131-237 123-253 (284)
124 3r0q_C Probable protein argini 99.4 9.6E-13 3.3E-17 118.9 12.4 110 118-233 50-169 (376)
125 3u81_A Catechol O-methyltransf 99.4 7.7E-13 2.6E-17 110.6 11.0 116 55-237 47-174 (221)
126 2gpy_A O-methyltransferase; st 99.4 6.8E-13 2.3E-17 111.8 10.7 120 46-233 35-160 (233)
127 1fbn_A MJ fibrillarin homologu 99.4 1.8E-12 6E-17 109.2 13.0 98 128-233 71-178 (230)
128 3r3h_A O-methyltransferase, SA 99.4 1.2E-13 4E-18 117.4 5.4 114 55-234 49-171 (242)
129 3ckk_A TRNA (guanine-N(7)-)-me 99.4 1E-12 3.6E-17 111.0 11.2 107 130-236 45-171 (235)
130 3d2l_A SAM-dependent methyltra 99.4 1.4E-12 4.6E-17 110.3 12.0 100 129-236 31-140 (243)
131 2avn_A Ubiquinone/menaquinone 99.4 1.6E-12 5.4E-17 111.5 12.5 95 131-236 54-155 (260)
132 2gs9_A Hypothetical protein TT 99.4 1.1E-12 3.8E-17 108.6 11.1 94 131-237 36-136 (211)
133 2yxd_A Probable cobalt-precorr 99.4 2.3E-12 8E-17 103.8 12.8 102 128-237 32-135 (183)
134 2b3t_A Protein methyltransfera 99.4 2E-12 6.9E-17 111.9 13.1 101 130-236 108-241 (276)
135 2a14_A Indolethylamine N-methy 99.4 4E-13 1.4E-17 115.5 8.5 108 128-235 52-199 (263)
136 2nxc_A L11 mtase, ribosomal pr 99.4 1E-12 3.4E-17 112.5 10.8 100 129-235 118-220 (254)
137 3fzg_A 16S rRNA methylase; met 99.4 9E-13 3.1E-17 106.1 9.6 107 116-232 36-151 (200)
138 1g6q_1 HnRNP arginine N-methyl 99.4 2E-12 6.9E-17 114.7 12.9 104 122-230 29-142 (328)
139 2vdw_A Vaccinia virus capping 99.4 1.4E-12 4.7E-17 114.4 11.7 102 130-236 47-172 (302)
140 1u2z_A Histone-lysine N-methyl 99.4 2.6E-12 9E-17 117.2 13.9 128 42-233 221-359 (433)
141 3ajd_A Putative methyltransfer 99.4 1.1E-12 3.8E-17 113.4 11.0 106 65-236 81-214 (274)
142 2igt_A SAM dependent methyltra 99.4 9.1E-13 3.1E-17 117.0 10.4 102 130-236 152-275 (332)
143 1sui_A Caffeoyl-COA O-methyltr 99.4 7.8E-13 2.7E-17 112.7 9.5 114 54-233 67-190 (247)
144 4fsd_A Arsenic methyltransfera 99.4 1.6E-12 5.6E-17 117.7 12.1 106 129-234 81-204 (383)
145 3cgg_A SAM-dependent methyltra 99.4 4.3E-12 1.5E-16 103.2 13.3 99 129-237 44-151 (195)
146 1o9g_A RRNA methyltransferase; 99.4 1.1E-12 3.7E-17 111.9 10.0 102 131-234 51-215 (250)
147 3gdh_A Trimethylguanosine synt 99.4 5.8E-14 2E-18 118.9 2.1 98 130-233 77-181 (241)
148 3ggd_A SAM-dependent methyltra 99.4 8E-13 2.8E-17 112.1 9.1 101 128-236 53-166 (245)
149 4dzr_A Protein-(glutamine-N5) 99.4 8.6E-14 2.9E-18 115.3 2.7 100 130-235 29-167 (215)
150 3uwp_A Histone-lysine N-methyl 99.4 2.4E-12 8.2E-17 115.6 11.8 123 51-234 159-289 (438)
151 3i9f_A Putative type 11 methyl 99.4 7E-13 2.4E-17 106.0 7.6 96 128-236 14-115 (170)
152 3k6r_A Putative transferase PH 99.4 2.2E-12 7.6E-17 111.2 11.2 100 129-233 123-225 (278)
153 2jjq_A Uncharacterized RNA met 99.4 1.2E-12 4E-17 119.9 10.0 125 129-269 288-416 (425)
154 3e8s_A Putative SAM dependent 99.4 1.5E-12 5.3E-17 108.5 9.9 98 129-237 50-156 (227)
155 3htx_A HEN1; HEN1, small RNA m 99.4 3E-12 1E-16 123.2 12.9 106 130-236 720-837 (950)
156 2vdv_E TRNA (guanine-N(7)-)-me 99.4 3.3E-12 1.1E-16 108.6 11.9 107 130-236 48-176 (246)
157 1g8a_A Fibrillarin-like PRE-rR 99.4 4.4E-12 1.5E-16 106.3 12.5 99 129-234 71-179 (227)
158 2ipx_A RRNA 2'-O-methyltransfe 99.4 4.8E-12 1.6E-16 106.6 12.2 103 65-235 75-184 (233)
159 3c3y_A Pfomt, O-methyltransfer 99.4 2.5E-12 8.6E-17 108.8 10.4 115 54-234 58-182 (237)
160 3c3p_A Methyltransferase; NP_9 99.4 1.2E-12 4.2E-17 108.5 8.1 100 130-234 55-161 (210)
161 3bkx_A SAM-dependent methyltra 99.4 5.5E-12 1.9E-16 108.7 12.5 106 127-236 39-162 (275)
162 2y1w_A Histone-arginine methyl 99.4 5.4E-12 1.8E-16 112.9 12.6 108 120-233 39-155 (348)
163 2frx_A Hypothetical protein YE 99.4 4.9E-12 1.7E-16 117.4 12.7 112 59-236 109-249 (479)
164 2i62_A Nicotinamide N-methyltr 99.4 2.5E-12 8.5E-17 110.1 10.0 109 128-236 53-201 (265)
165 2avd_A Catechol-O-methyltransf 99.4 2E-12 6.7E-17 108.5 9.2 119 48-233 52-179 (229)
166 3p2e_A 16S rRNA methylase; met 99.4 1.5E-12 5.1E-17 109.4 8.1 99 130-233 23-139 (225)
167 1p91_A Ribosomal RNA large sub 99.3 4.6E-12 1.6E-16 109.0 11.3 98 130-238 84-183 (269)
168 3m6w_A RRNA methylase; rRNA me 99.3 1.9E-12 6.4E-17 119.3 9.3 112 56-236 92-232 (464)
169 3bxo_A N,N-dimethyltransferase 99.3 9.3E-12 3.2E-16 104.8 12.8 95 130-235 39-143 (239)
170 3cbg_A O-methyltransferase; cy 99.3 2.1E-12 7.3E-17 108.9 8.5 115 55-235 61-184 (232)
171 3q87_B N6 adenine specific DNA 99.3 1.5E-12 5.3E-17 104.4 7.3 91 130-237 22-127 (170)
172 2plw_A Ribosomal RNA methyltra 99.3 5.8E-12 2E-16 103.4 10.7 103 118-236 9-157 (201)
173 3mq2_A 16S rRNA methyltransfer 99.3 3.6E-12 1.2E-16 106.1 9.6 105 129-235 25-142 (218)
174 3bzb_A Uncharacterized protein 99.3 2.1E-11 7.3E-16 105.7 14.7 110 127-236 75-208 (281)
175 1uwv_A 23S rRNA (uracil-5-)-me 99.3 4.1E-12 1.4E-16 116.9 10.7 133 127-269 282-421 (433)
176 3adn_A Spermidine synthase; am 99.3 4.5E-12 1.5E-16 110.6 10.3 106 131-236 83-201 (294)
177 2yxl_A PH0851 protein, 450AA l 99.3 1.9E-11 6.5E-16 113.0 14.8 107 65-237 257-393 (450)
178 3bgv_A MRNA CAP guanine-N7 met 99.3 1.3E-11 4.5E-16 108.6 12.8 107 130-236 33-158 (313)
179 3tm4_A TRNA (guanine N2-)-meth 99.3 1.4E-11 4.8E-16 111.2 13.0 101 129-235 215-331 (373)
180 3dou_A Ribosomal RNA large sub 99.3 8.3E-12 2.8E-16 102.1 10.3 104 118-237 12-143 (191)
181 3m4x_A NOL1/NOP2/SUN family pr 99.3 5E-12 1.7E-16 116.3 9.9 112 57-236 97-237 (456)
182 2b78_A Hypothetical protein SM 99.3 3.3E-12 1.1E-16 115.7 8.4 104 130-238 211-336 (385)
183 3cc8_A Putative methyltransfer 99.3 1E-11 3.6E-16 103.7 10.8 96 130-237 31-134 (230)
184 1wxx_A TT1595, hypothetical pr 99.3 3.5E-12 1.2E-16 115.5 8.4 102 131-237 209-329 (382)
185 2aot_A HMT, histamine N-methyl 99.3 3.3E-12 1.1E-16 111.4 7.8 103 130-236 51-175 (292)
186 3i53_A O-methyltransferase; CO 99.3 5E-11 1.7E-15 105.8 15.6 101 129-236 167-277 (332)
187 4dmg_A Putative uncharacterize 99.3 5.9E-12 2E-16 114.1 9.7 102 130-237 213-330 (393)
188 3opn_A Putative hemolysin; str 99.3 1.1E-12 3.7E-17 110.7 4.5 112 118-233 24-137 (232)
189 3bt7_A TRNA (uracil-5-)-methyl 99.3 1.5E-12 5.1E-17 117.4 5.8 129 132-270 214-359 (369)
190 3gwz_A MMCR; methyltransferase 99.3 7.5E-11 2.6E-15 106.3 16.6 103 126-235 197-309 (369)
191 3b3j_A Histone-arginine methyl 99.3 1.2E-11 4.2E-16 114.9 11.7 109 119-233 146-263 (480)
192 1vlm_A SAM-dependent methyltra 99.3 1E-11 3.5E-16 103.6 10.0 98 124-237 40-143 (219)
193 2pjd_A Ribosomal RNA small sub 99.3 1.1E-11 3.8E-16 110.6 10.7 100 130-237 195-307 (343)
194 2g72_A Phenylethanolamine N-me 99.3 7.2E-12 2.5E-16 109.0 9.1 104 130-233 70-215 (289)
195 2yx1_A Hypothetical protein MJ 99.3 1.8E-11 6E-16 109.0 11.7 99 130-236 194-294 (336)
196 3hp7_A Hemolysin, putative; st 99.3 6.5E-12 2.2E-16 108.8 8.5 108 118-235 72-187 (291)
197 1xj5_A Spermidine synthase 1; 99.3 1.3E-11 4.4E-16 109.5 10.4 105 130-235 119-237 (334)
198 3c0k_A UPF0064 protein YCCW; P 99.3 7E-12 2.4E-16 114.1 8.6 103 130-237 219-343 (396)
199 1zq9_A Probable dimethyladenos 99.3 2.3E-11 8E-16 105.7 11.4 83 126-214 23-105 (285)
200 2as0_A Hypothetical protein PH 99.3 8.6E-12 2.9E-16 113.5 8.8 103 130-237 216-339 (396)
201 4azs_A Methyltransferase WBDD; 99.3 7.7E-12 2.6E-16 118.9 8.3 98 130-232 65-172 (569)
202 2qe6_A Uncharacterized protein 99.3 4.2E-11 1.4E-15 103.5 12.3 99 131-236 77-199 (274)
203 1ej0_A FTSJ; methyltransferase 99.3 3.1E-11 1.1E-15 96.4 10.6 100 123-238 14-141 (180)
204 3bwc_A Spermidine synthase; SA 99.3 6.2E-11 2.1E-15 104.0 13.3 106 130-236 94-213 (304)
205 1iy9_A Spermidine synthase; ro 99.2 2.4E-11 8.2E-16 105.1 10.2 105 131-236 75-192 (275)
206 3dp7_A SAM-dependent methyltra 99.2 8.2E-11 2.8E-15 105.7 14.1 100 130-235 178-289 (363)
207 2qm3_A Predicted methyltransfe 99.2 6.4E-11 2.2E-15 106.9 13.2 100 130-235 171-280 (373)
208 2ip2_A Probable phenazine-spec 99.2 1.1E-10 3.9E-15 103.5 14.7 100 128-235 165-274 (334)
209 1qzz_A RDMB, aclacinomycin-10- 99.2 8.6E-11 3E-15 105.9 14.1 100 128-234 179-288 (374)
210 2o07_A Spermidine synthase; st 99.2 7.3E-11 2.5E-15 103.4 13.0 105 130-235 94-211 (304)
211 1mjf_A Spermidine synthase; sp 99.2 1.2E-11 4E-16 107.4 7.6 104 130-235 74-195 (281)
212 4e2x_A TCAB9; kijanose, tetron 99.2 1.8E-12 6.1E-17 118.7 2.5 105 123-235 99-210 (416)
213 2r3s_A Uncharacterized protein 99.2 5.8E-11 2E-15 105.3 12.1 101 130-236 164-274 (335)
214 3gjy_A Spermidine synthase; AP 99.2 2.3E-11 7.9E-16 106.5 9.2 99 133-236 91-203 (317)
215 3gru_A Dimethyladenosine trans 99.2 6.2E-11 2.1E-15 103.1 11.9 95 123-224 42-136 (295)
216 1af7_A Chemotaxis receptor met 99.2 3.4E-11 1.2E-15 103.8 10.1 105 131-235 105-254 (274)
217 1inl_A Spermidine synthase; be 99.2 3.1E-11 1E-15 105.5 9.8 105 131-236 90-208 (296)
218 3v97_A Ribosomal RNA large sub 99.2 2.5E-11 8.6E-16 117.7 10.0 105 130-238 538-662 (703)
219 2h00_A Methyltransferase 10 do 99.2 3.8E-11 1.3E-15 102.3 9.5 79 131-213 65-151 (254)
220 2b9e_A NOL1/NOP2/SUN domain fa 99.2 2.9E-10 1E-14 99.7 15.3 50 65-114 100-149 (309)
221 1x19_A CRTF-related protein; m 99.2 1.8E-10 6.1E-15 103.3 14.0 101 128-235 187-297 (359)
222 2nyu_A Putative ribosomal RNA 99.2 5.9E-11 2E-15 96.9 9.5 103 119-237 10-149 (196)
223 3k0b_A Predicted N6-adenine-sp 99.2 1.6E-10 5.5E-15 104.7 13.2 115 119-238 189-355 (393)
224 2h1r_A Dimethyladenosine trans 99.2 9.9E-11 3.4E-15 102.4 11.5 83 128-217 39-121 (299)
225 1sqg_A SUN protein, FMU protei 99.2 1.1E-10 3.7E-15 107.3 12.1 117 50-236 231-377 (429)
226 1tw3_A COMT, carminomycin 4-O- 99.2 2.3E-10 7.9E-15 102.5 13.6 101 128-235 180-290 (360)
227 2b2c_A Spermidine synthase; be 99.2 3.7E-11 1.3E-15 105.7 8.0 106 130-236 107-225 (314)
228 2i7c_A Spermidine synthase; tr 99.2 4.3E-11 1.5E-15 103.9 8.1 106 130-236 77-195 (283)
229 3mcz_A O-methyltransferase; ad 99.2 1.2E-10 4.2E-15 104.0 11.3 102 129-235 176-289 (352)
230 2cmg_A Spermidine synthase; tr 99.2 4.1E-11 1.4E-15 102.8 7.6 102 131-236 72-174 (262)
231 3ldg_A Putative uncharacterize 99.2 3.2E-10 1.1E-14 102.3 13.8 116 118-238 181-348 (384)
232 2pt6_A Spermidine synthase; tr 99.2 5.8E-11 2E-15 104.8 8.6 106 130-236 115-233 (321)
233 1uir_A Polyamine aminopropyltr 99.2 4.9E-11 1.7E-15 105.1 7.9 106 130-235 76-197 (314)
234 3cvo_A Methyltransferase-like 99.2 3.4E-10 1.2E-14 92.6 12.1 100 65-233 28-154 (202)
235 3frh_A 16S rRNA methylase; met 99.2 5.4E-10 1.8E-14 93.2 13.4 96 130-234 104-206 (253)
236 3ldu_A Putative methylase; str 99.1 2.9E-10 9.8E-15 102.8 12.2 115 119-238 183-349 (385)
237 1wy7_A Hypothetical protein PH 99.1 1.5E-09 5E-14 89.4 15.0 93 129-233 47-148 (207)
238 1ne2_A Hypothetical protein TA 99.1 7.8E-10 2.7E-14 90.6 13.2 91 129-235 49-148 (200)
239 2oxt_A Nucleoside-2'-O-methylt 99.1 5E-11 1.7E-15 102.3 5.7 104 127-237 70-189 (265)
240 2wa2_A Non-structural protein 99.1 5.6E-11 1.9E-15 102.6 5.9 104 127-237 78-197 (276)
241 3lcv_B Sisomicin-gentamicin re 99.1 5.2E-10 1.8E-14 94.2 11.5 95 130-231 131-234 (281)
242 3lst_A CALO1 methyltransferase 99.1 7.4E-10 2.5E-14 98.9 12.6 97 128-234 181-287 (348)
243 3tqs_A Ribosomal RNA small sub 99.1 4.9E-10 1.7E-14 95.6 10.8 94 123-224 21-118 (255)
244 2f8l_A Hypothetical protein LM 99.1 3.6E-10 1.2E-14 100.8 10.4 99 130-235 129-258 (344)
245 2p41_A Type II methyltransfera 99.1 1.6E-10 5.4E-15 101.3 7.4 100 127-236 78-194 (305)
246 3giw_A Protein of unknown func 99.1 2.2E-10 7.7E-15 97.9 7.9 102 131-237 78-204 (277)
247 4a6d_A Hydroxyindole O-methylt 99.0 3.6E-09 1.2E-13 94.7 15.0 99 128-234 176-284 (353)
248 2zfu_A Nucleomethylin, cerebra 99.0 8.6E-10 3E-14 91.3 9.4 88 126-236 62-154 (215)
249 3axs_A Probable N(2),N(2)-dime 99.0 4.7E-10 1.6E-14 101.2 8.3 99 130-233 51-158 (392)
250 2dul_A N(2),N(2)-dimethylguano 99.0 3.9E-10 1.3E-14 101.6 7.6 103 131-233 47-164 (378)
251 2okc_A Type I restriction enzy 99.0 1.3E-09 4.4E-14 100.6 11.2 135 44-235 150-309 (445)
252 1qam_A ERMC' methyltransferase 99.0 5.3E-09 1.8E-13 88.7 14.0 83 122-212 21-104 (244)
253 3reo_A (ISO)eugenol O-methyltr 99.0 7.9E-09 2.7E-13 92.9 15.7 92 129-235 201-302 (368)
254 3fut_A Dimethyladenosine trans 99.0 1.2E-09 4.2E-14 93.8 9.7 78 128-214 44-122 (271)
255 1fp1_D Isoliquiritigenin 2'-O- 99.0 5.9E-09 2E-13 93.9 14.4 90 129-233 207-306 (372)
256 3p9c_A Caffeic acid O-methyltr 99.0 1.3E-08 4.3E-13 91.5 15.8 92 129-235 199-300 (364)
257 3sso_A Methyltransferase; macr 99.0 8.8E-10 3E-14 98.8 8.0 96 65-235 214-326 (419)
258 2ih2_A Modification methylase 99.0 1.2E-09 4.2E-14 99.8 8.4 115 44-236 18-167 (421)
259 2qfm_A Spermine synthase; sper 99.0 8.5E-10 2.9E-14 97.7 6.9 108 131-238 188-319 (364)
260 1yub_A Ermam, rRNA methyltrans 99.0 3.9E-11 1.3E-15 101.9 -1.7 103 126-236 24-148 (245)
261 1fp2_A Isoflavone O-methyltran 98.9 1.4E-08 4.9E-13 90.6 14.1 91 129-234 186-289 (352)
262 3ll7_A Putative methyltransfer 98.9 2.5E-09 8.5E-14 96.8 8.9 102 131-235 93-211 (410)
263 2ld4_A Anamorsin; methyltransf 98.9 6.6E-10 2.3E-14 89.2 3.2 84 128-234 9-102 (176)
264 2r6z_A UPF0341 protein in RSP 98.9 6.6E-10 2.3E-14 95.0 3.4 82 128-213 80-172 (258)
265 3v97_A Ribosomal RNA large sub 98.9 1.9E-08 6.5E-13 97.6 13.2 114 120-237 179-351 (703)
266 2ar0_A M.ecoki, type I restric 98.8 9.9E-09 3.4E-13 96.7 10.4 141 44-235 148-314 (541)
267 1m6y_A S-adenosyl-methyltransf 98.8 8E-09 2.7E-13 90.1 8.3 62 50-114 11-72 (301)
268 3uzu_A Ribosomal RNA small sub 98.8 2.3E-08 7.9E-13 86.3 10.8 89 127-224 38-136 (279)
269 2xyq_A Putative 2'-O-methyl tr 98.8 1.7E-08 5.9E-13 87.4 9.3 89 127-236 59-174 (290)
270 3o4f_A Spermidine synthase; am 98.8 2.1E-07 7.3E-12 80.2 15.7 134 92-237 56-202 (294)
271 3ftd_A Dimethyladenosine trans 98.8 2.8E-08 9.5E-13 84.4 9.7 92 123-224 23-117 (249)
272 1zg3_A Isoflavanone 4'-O-methy 98.7 4.1E-08 1.4E-12 87.9 10.4 90 130-234 192-294 (358)
273 2oyr_A UPF0341 protein YHIQ; a 98.7 1.2E-08 4.2E-13 86.9 5.3 116 94-213 53-175 (258)
274 1qyr_A KSGA, high level kasuga 98.7 2.6E-08 9E-13 84.7 6.6 82 123-213 13-101 (252)
275 3lkd_A Type I restriction-modi 98.6 4.6E-07 1.6E-11 85.2 14.8 127 44-236 196-361 (542)
276 3khk_A Type I restriction-modi 98.6 9.2E-08 3.2E-12 90.0 9.7 138 44-235 224-397 (544)
277 3mti_A RRNA methylase; SAM-dep 98.6 1.3E-07 4.5E-12 76.1 8.5 58 54-114 9-66 (185)
278 4gqb_A Protein arginine N-meth 98.5 3.3E-07 1.1E-11 87.1 10.8 95 130-230 356-464 (637)
279 4fzv_A Putative methyltransfer 98.5 3.5E-07 1.2E-11 81.4 10.4 114 65-239 146-290 (359)
280 4gek_A TRNA (CMO5U34)-methyltr 98.5 3.4E-07 1.2E-11 78.2 9.2 45 129-173 68-116 (261)
281 3uzu_A Ribosomal RNA small sub 98.5 3.5E-07 1.2E-11 78.8 7.9 66 44-111 20-87 (279)
282 3gru_A Dimethyladenosine trans 98.5 3.3E-07 1.1E-11 79.5 7.8 66 44-114 28-94 (295)
283 3s1s_A Restriction endonucleas 98.5 7.1E-07 2.4E-11 86.2 10.7 65 44-108 294-364 (878)
284 3njr_A Precorrin-6Y methylase; 98.5 5.8E-07 2E-11 73.8 8.9 62 48-114 38-99 (204)
285 3e05_A Precorrin-6Y C5,15-meth 98.4 8.9E-07 3E-11 72.4 9.4 62 50-114 25-86 (204)
286 3duw_A OMT, O-methyltransferas 98.4 4.5E-06 1.5E-10 69.1 13.8 60 54-114 46-105 (223)
287 3tfw_A Putative O-methyltransf 98.4 2.3E-06 8E-11 72.4 12.1 60 54-114 51-110 (248)
288 2qy6_A UPF0209 protein YFCK; s 98.4 3E-07 1E-11 78.2 6.5 118 66-233 59-213 (257)
289 3tr6_A O-methyltransferase; ce 98.4 3.2E-06 1.1E-10 70.0 12.2 59 55-114 53-111 (225)
290 2wk1_A NOVP; transferase, O-me 98.4 1.5E-06 5E-11 74.8 10.0 102 129-234 104-245 (282)
291 3tqs_A Ribosomal RNA small sub 98.4 5E-07 1.7E-11 76.8 7.0 66 44-114 7-73 (255)
292 3ntv_A MW1564 protein; rossman 98.4 2.3E-06 7.8E-11 71.6 10.8 63 49-114 55-117 (232)
293 3evf_A RNA-directed RNA polyme 98.4 4.2E-06 1.5E-10 70.9 12.1 113 116-236 60-187 (277)
294 3hm2_A Precorrin-6Y C5,15-meth 98.4 6.8E-07 2.3E-11 71.2 6.7 61 51-114 11-71 (178)
295 3ua3_A Protein arginine N-meth 98.4 8.6E-07 3E-11 84.3 8.3 94 132-230 410-531 (745)
296 2yxd_A Probable cobalt-precorr 98.3 2.6E-06 9E-11 67.8 10.0 61 49-114 19-79 (183)
297 3lbf_A Protein-L-isoaspartate 98.3 1.4E-06 4.8E-11 71.5 8.2 45 128-172 74-118 (210)
298 3grz_A L11 mtase, ribosomal pr 98.3 3.1E-06 1.1E-10 69.1 10.3 59 54-114 47-105 (205)
299 1nkv_A Hypothetical protein YJ 98.3 2.3E-06 7.7E-11 72.4 9.3 62 49-114 20-81 (256)
300 3iv6_A Putative Zn-dependent a 98.3 8.6E-07 2.9E-11 75.6 6.3 59 51-114 31-89 (261)
301 4auk_A Ribosomal RNA large sub 98.3 5.6E-06 1.9E-10 73.3 11.3 74 128-213 208-281 (375)
302 1qyr_A KSGA, high level kasuga 98.3 1.1E-06 3.7E-11 74.7 6.5 61 48-113 4-64 (252)
303 3hem_A Cyclopropane-fatty-acyl 98.2 2.6E-06 8.8E-11 74.1 8.5 48 65-114 70-117 (302)
304 2k4m_A TR8_protein, UPF0146 pr 98.2 1.6E-05 5.6E-10 60.7 11.5 86 130-235 34-123 (153)
305 1qam_A ERMC' methyltransferase 98.2 1.6E-06 5.4E-11 73.3 6.7 60 49-113 14-73 (244)
306 1vbf_A 231AA long hypothetical 98.2 2.9E-06 1E-10 70.6 8.2 45 128-172 67-111 (231)
307 1zq9_A Probable dimethyladenos 98.2 2E-06 6.7E-11 74.4 7.3 66 44-114 6-72 (285)
308 3fut_A Dimethyladenosine trans 98.2 1.4E-06 5E-11 74.6 6.3 64 44-113 25-89 (271)
309 3fzg_A 16S rRNA methylase; met 98.2 2.7E-06 9.4E-11 68.4 7.4 59 55-114 37-95 (200)
310 1g8a_A Fibrillarin-like PRE-rR 98.2 1.5E-06 5.2E-11 72.2 6.1 50 65-114 71-120 (227)
311 1pjz_A Thiopurine S-methyltran 98.2 2.3E-06 7.9E-11 70.1 7.0 52 56-112 13-64 (203)
312 2h1r_A Dimethyladenosine trans 98.2 2.3E-06 7.9E-11 74.5 7.3 69 41-114 17-86 (299)
313 3gnl_A Uncharacterized protein 98.2 2E-06 6.9E-11 72.3 6.6 45 129-173 19-65 (244)
314 3kr9_A SAM-dependent methyltra 98.2 2.1E-06 7.3E-11 71.3 6.7 45 129-173 13-59 (225)
315 1ws6_A Methyltransferase; stru 98.2 5.8E-06 2E-10 65.1 9.0 59 53-114 27-85 (171)
316 4df3_A Fibrillarin-like rRNA/T 98.2 2.6E-06 8.8E-11 71.2 6.9 45 128-172 74-121 (233)
317 3bkx_A SAM-dependent methyltra 98.2 2.6E-06 9E-11 72.8 7.2 58 55-114 33-96 (275)
318 3ftd_A Dimethyladenosine trans 98.2 1.2E-06 4.1E-11 74.2 4.8 64 44-111 9-73 (249)
319 3c3p_A Methyltransferase; NP_9 98.2 3.8E-06 1.3E-10 69.0 7.6 59 55-114 45-103 (210)
320 3c6k_A Spermine synthase; sper 98.2 2.9E-06 1E-10 75.5 7.1 107 131-237 205-335 (381)
321 3lec_A NADB-rossmann superfami 98.2 2.9E-06 1E-10 70.7 6.7 45 129-173 19-65 (230)
322 2esr_A Methyltransferase; stru 98.2 5.8E-06 2E-10 65.8 8.3 59 53-114 18-76 (177)
323 1nt2_A Fibrillarin-like PRE-rR 98.2 2.8E-06 9.5E-11 70.1 6.6 44 128-171 54-99 (210)
324 3gcz_A Polyprotein; flavivirus 98.2 2.5E-06 8.5E-11 72.4 6.2 113 116-236 76-204 (282)
325 3ufb_A Type I restriction-modi 98.2 1.9E-05 6.6E-10 74.1 12.9 136 44-235 196-364 (530)
326 3u81_A Catechol O-methyltransf 98.2 3.7E-06 1.3E-10 69.7 7.1 46 128-173 55-103 (221)
327 3tma_A Methyltransferase; thum 98.2 7.9E-06 2.7E-10 72.8 9.8 64 49-114 187-250 (354)
328 3p9n_A Possible methyltransfer 98.1 8.2E-06 2.8E-10 65.8 8.8 61 52-114 28-89 (189)
329 1fbn_A MJ fibrillarin homologu 98.1 4.4E-06 1.5E-10 69.7 7.4 49 65-114 72-120 (230)
330 3evz_A Methyltransferase; NYSG 98.1 8.5E-06 2.9E-10 67.7 9.0 50 63-114 51-101 (230)
331 3fpf_A Mtnas, putative unchara 98.1 7E-06 2.4E-10 70.9 8.7 50 63-114 118-168 (298)
332 2yxe_A Protein-L-isoaspartate 98.1 5E-06 1.7E-10 68.4 7.5 45 128-172 74-121 (215)
333 1nv8_A HEMK protein; class I a 98.1 6.5E-06 2.2E-10 71.1 8.4 69 43-114 98-168 (284)
334 2px2_A Genome polyprotein [con 98.1 2.8E-06 9.7E-11 71.0 5.8 36 64-99 70-108 (269)
335 3kkz_A Uncharacterized protein 98.1 4.6E-06 1.6E-10 71.1 7.4 58 54-114 34-91 (267)
336 2zig_A TTHA0409, putative modi 98.1 1E-05 3.5E-10 70.3 9.6 46 130-175 234-279 (297)
337 2yvl_A TRMI protein, hypotheti 98.1 1.1E-05 3.8E-10 67.7 9.5 65 45-114 71-135 (248)
338 3g5t_A Trans-aconitate 3-methy 98.1 9.7E-06 3.3E-10 70.3 9.4 50 65-114 34-83 (299)
339 1l3i_A Precorrin-6Y methyltran 98.1 1.2E-05 4.2E-10 64.3 9.4 60 50-114 18-77 (192)
340 3m33_A Uncharacterized protein 98.1 5.7E-06 1.9E-10 68.8 7.5 45 64-111 45-89 (226)
341 1xxl_A YCGJ protein; structura 98.1 6.5E-06 2.2E-10 69.0 7.9 60 50-114 6-65 (239)
342 1kpg_A CFA synthase;, cyclopro 98.1 1.3E-05 4.5E-10 68.9 9.9 48 65-114 62-109 (287)
343 2nxc_A L11 mtase, ribosomal pr 98.1 2.5E-05 8.6E-10 66.2 11.4 58 54-114 107-164 (254)
344 4dzr_A Protein-(glutamine-N5) 98.1 3.9E-06 1.3E-10 68.7 6.1 48 66-114 29-76 (215)
345 1jg1_A PIMT;, protein-L-isoasp 98.1 5.1E-06 1.8E-10 69.5 6.8 45 128-172 88-133 (235)
346 3jwh_A HEN1; methyltransferase 98.1 8.6E-06 2.9E-10 67.1 8.0 58 54-114 18-75 (217)
347 3gu3_A Methyltransferase; alph 98.1 7E-06 2.4E-10 70.7 7.7 63 51-114 7-69 (284)
348 2fhp_A Methylase, putative; al 98.1 1.5E-05 5.2E-10 63.7 9.3 59 53-114 31-89 (187)
349 1wg8_A Predicted S-adenosylmet 98.1 1E-05 3.5E-10 68.9 8.5 55 51-110 8-62 (285)
350 3dr5_A Putative O-methyltransf 98.1 7E-06 2.4E-10 68.2 7.3 43 131-173 56-101 (221)
351 1vl5_A Unknown conserved prote 98.1 9.9E-06 3.4E-10 68.7 8.3 57 53-114 25-81 (260)
352 3f4k_A Putative methyltransfer 98.1 7.7E-06 2.6E-10 69.1 7.6 60 52-114 32-91 (257)
353 2h00_A Methyltransferase 10 do 98.1 1.5E-05 5.1E-10 67.4 9.4 59 55-114 49-111 (254)
354 1dus_A MJ0882; hypothetical pr 98.1 1.1E-05 3.7E-10 64.8 8.2 57 53-114 40-96 (194)
355 3eey_A Putative rRNA methylase 98.1 6.2E-06 2.1E-10 66.8 6.7 46 128-173 19-67 (197)
356 1wy7_A Hypothetical protein PH 98.1 1.2E-05 4E-10 65.7 8.3 66 47-114 28-94 (207)
357 3uwp_A Histone-lysine N-methyl 98.1 8.7E-06 3E-10 73.3 8.0 52 124-175 166-219 (438)
358 1dl5_A Protein-L-isoaspartate 98.1 6.8E-06 2.3E-10 72.1 7.2 45 128-172 72-119 (317)
359 3mb5_A SAM-dependent methyltra 98.1 1E-05 3.4E-10 68.4 7.9 49 124-172 86-137 (255)
360 3ggd_A SAM-dependent methyltra 98.1 1.1E-05 3.6E-10 67.8 8.0 55 55-112 44-98 (245)
361 2gb4_A Thiopurine S-methyltran 98.1 9.4E-06 3.2E-10 68.9 7.7 45 65-112 66-110 (252)
362 3htx_A HEN1; HEN1, small RNA m 98.0 1.1E-05 3.6E-10 78.4 8.7 79 34-114 687-768 (950)
363 3g07_A 7SK snRNA methylphospha 98.0 3.3E-06 1.1E-10 73.3 4.8 57 57-114 36-92 (292)
364 3jwg_A HEN1, methyltransferase 98.0 1.1E-05 3.8E-10 66.4 7.8 58 54-114 18-75 (219)
365 1ve3_A Hypothetical protein PH 98.0 1.7E-05 5.7E-10 65.6 8.8 58 54-114 25-82 (227)
366 3e23_A Uncharacterized protein 98.0 1.2E-05 4.2E-10 65.8 7.9 54 56-112 32-85 (211)
367 3orh_A Guanidinoacetate N-meth 98.0 3.9E-06 1.3E-10 70.5 4.9 48 65-114 58-105 (236)
368 2b3t_A Protein methyltransfera 98.0 1.9E-05 6.5E-10 67.7 9.4 69 44-114 86-155 (276)
369 2ift_A Putative methylase HI07 98.0 9.8E-06 3.4E-10 66.2 7.2 59 53-114 40-98 (201)
370 3dlc_A Putative S-adenosyl-L-m 98.0 9.8E-06 3.4E-10 66.4 7.2 57 53-114 32-88 (219)
371 1ne2_A Hypothetical protein TA 98.0 1.4E-05 4.9E-10 64.9 8.1 62 50-113 33-95 (200)
372 2fk8_A Methoxy mycolic acid sy 98.0 1.2E-05 4E-10 70.4 8.0 48 65-114 88-135 (318)
373 2fca_A TRNA (guanine-N(7)-)-me 98.0 1.2E-05 3.9E-10 66.4 7.4 48 66-114 37-84 (213)
374 2gpy_A O-methyltransferase; st 98.0 8.8E-06 3E-10 67.9 6.8 43 130-172 53-97 (233)
375 2frn_A Hypothetical protein PH 98.0 8.5E-06 2.9E-10 70.1 6.8 52 61-114 119-170 (278)
376 3bus_A REBM, methyltransferase 98.0 1.6E-05 5.4E-10 67.8 8.5 48 65-114 59-106 (273)
377 3dh0_A SAM dependent methyltra 98.0 6.8E-06 2.3E-10 67.7 6.0 45 128-172 34-81 (219)
378 1sui_A Caffeoyl-COA O-methyltr 98.0 7E-06 2.4E-10 69.4 6.2 45 129-173 77-124 (247)
379 2hnk_A SAM-dependent O-methylt 98.0 9.2E-06 3.1E-10 68.1 6.9 44 129-172 58-104 (239)
380 3q87_B N6 adenine specific DNA 98.0 1E-05 3.5E-10 64.2 6.8 50 54-107 10-59 (170)
381 2pbf_A Protein-L-isoaspartate 98.0 1.5E-05 5E-10 66.2 8.0 45 128-172 77-128 (227)
382 3lpm_A Putative methyltransfer 98.0 1.8E-05 6.2E-10 67.2 8.6 60 52-114 34-94 (259)
383 3mq2_A 16S rRNA methyltransfer 98.0 8.2E-06 2.8E-10 67.3 6.1 54 55-111 17-70 (218)
384 2avd_A Catechol-O-methyltransf 98.0 1.3E-05 4.5E-10 66.5 7.4 45 128-172 66-113 (229)
385 3gdh_A Trimethylguanosine synt 98.0 1.5E-05 5E-10 66.8 7.7 57 54-114 66-122 (241)
386 2pwy_A TRNA (adenine-N(1)-)-me 98.0 1.8E-05 6E-10 66.9 8.2 50 123-172 88-140 (258)
387 1o9g_A RRNA methyltransferase; 98.0 1.6E-05 5.4E-10 67.1 7.8 60 55-114 37-99 (250)
388 2fpo_A Methylase YHHF; structu 98.0 1.4E-05 4.7E-10 65.4 7.1 58 54-114 42-99 (202)
389 3c3y_A Pfomt, O-methyltransfer 98.0 1.3E-05 4.6E-10 67.2 7.0 45 129-173 68-115 (237)
390 1xdz_A Methyltransferase GIDB; 98.0 1.2E-05 4.2E-10 67.4 6.8 48 66-114 69-116 (240)
391 4hg2_A Methyltransferase type 98.0 4.1E-06 1.4E-10 71.3 3.8 53 55-110 27-79 (257)
392 4fsd_A Arsenic methyltransfera 98.0 1.2E-05 4.1E-10 72.4 7.1 50 65-114 81-130 (383)
393 3cbg_A O-methyltransferase; cy 98.0 1.2E-05 4.2E-10 67.1 6.7 43 130-172 71-116 (232)
394 1zx0_A Guanidinoacetate N-meth 98.0 9.7E-06 3.3E-10 67.8 6.0 48 65-114 58-105 (236)
395 2vdv_E TRNA (guanine-N(7)-)-me 98.0 1.5E-05 5.2E-10 67.1 7.3 50 64-114 46-95 (246)
396 3a27_A TYW2, uncharacterized p 98.0 2.9E-05 1E-09 66.5 9.1 52 62-114 114-165 (272)
397 1i9g_A Hypothetical protein RV 98.0 2E-05 6.7E-10 67.6 7.9 47 126-172 94-143 (280)
398 2o57_A Putative sarcosine dime 97.9 2.8E-05 9.6E-10 67.2 9.0 59 54-114 67-127 (297)
399 3g89_A Ribosomal RNA small sub 97.9 1.6E-05 5.6E-10 67.2 7.3 48 66-114 79-126 (249)
400 3d2l_A SAM-dependent methyltra 97.9 2E-05 6.9E-10 65.8 7.8 56 55-114 21-76 (243)
401 2yqz_A Hypothetical protein TT 97.9 1.9E-05 6.6E-10 66.7 7.6 59 51-112 20-81 (263)
402 1yzh_A TRNA (guanine-N(7)-)-me 97.9 2.1E-05 7.2E-10 64.7 7.6 48 66-114 40-87 (214)
403 3dxy_A TRNA (guanine-N(7)-)-me 97.9 2.1E-05 7.1E-10 65.2 7.6 48 66-114 33-80 (218)
404 3ege_A Putative methyltransfer 97.9 1.2E-05 4E-10 68.4 6.1 57 50-111 19-75 (261)
405 3tm4_A TRNA (guanine N2-)-meth 97.9 3.1E-05 1.1E-09 69.5 9.2 61 50-114 203-263 (373)
406 3ccf_A Cyclopropane-fatty-acyl 97.9 1.6E-05 5.3E-10 68.3 7.0 53 55-112 47-99 (279)
407 1yub_A Ermam, rRNA methyltrans 97.9 7.9E-07 2.7E-11 75.2 -1.2 64 44-112 7-71 (245)
408 3ujc_A Phosphoethanolamine N-m 97.9 1.1E-05 3.6E-10 68.4 5.8 48 65-114 53-100 (266)
409 3p8z_A Mtase, non-structural p 97.9 0.00012 4.2E-09 60.2 11.7 111 118-238 66-191 (267)
410 3b5i_A S-adenosyl-L-methionine 97.9 4.6E-05 1.6E-09 68.1 10.0 106 132-237 53-229 (374)
411 1u2z_A Histone-lysine N-methyl 97.9 1.8E-05 6E-10 72.2 7.5 49 126-174 237-287 (433)
412 1jsx_A Glucose-inhibited divis 97.9 2.4E-05 8.3E-10 63.7 7.6 60 54-114 51-111 (207)
413 2xvm_A Tellurite resistance pr 97.9 3.3E-05 1.1E-09 62.3 8.4 55 55-114 22-76 (199)
414 3hnr_A Probable methyltransfer 97.9 2.6E-05 9E-10 64.1 7.8 54 55-113 35-88 (220)
415 3eld_A Methyltransferase; flav 97.9 0.00014 4.7E-09 62.2 12.2 112 116-235 67-193 (300)
416 2pxx_A Uncharacterized protein 97.9 2.7E-05 9.1E-10 63.6 7.8 57 55-113 30-86 (215)
417 1i1n_A Protein-L-isoaspartate 97.9 2.4E-05 8.2E-10 64.8 7.5 47 129-175 75-124 (226)
418 1yb2_A Hypothetical protein TA 97.9 1.6E-05 5.6E-10 68.1 6.7 50 123-172 102-154 (275)
419 1m6y_A S-adenosyl-methyltransf 97.9 1.7E-05 5.7E-10 69.0 6.7 80 128-213 23-109 (301)
420 2b25_A Hypothetical protein; s 97.9 2.5E-05 8.7E-10 68.9 8.0 48 128-175 102-152 (336)
421 3dtn_A Putative methyltransfer 97.9 2.7E-05 9.2E-10 64.7 7.6 49 65-114 42-90 (234)
422 3l8d_A Methyltransferase; stru 97.9 1.8E-05 6.2E-10 66.1 6.5 54 56-112 42-95 (242)
423 1o54_A SAM-dependent O-methylt 97.9 3E-05 1E-09 66.5 8.0 49 124-172 105-156 (277)
424 3ckk_A TRNA (guanine-N(7)-)-me 97.9 2E-05 6.8E-10 66.1 6.5 49 65-114 44-92 (235)
425 3ocj_A Putative exported prote 97.9 1.2E-05 4.2E-10 69.9 5.4 56 59-114 110-165 (305)
426 3id6_C Fibrillarin-like rRNA/T 97.9 3.8E-05 1.3E-09 64.2 8.0 43 128-170 73-118 (232)
427 3vc1_A Geranyl diphosphate 2-C 97.9 5.2E-05 1.8E-09 66.1 9.3 48 65-114 115-162 (312)
428 3r3h_A O-methyltransferase, SA 97.9 4.5E-06 1.5E-10 70.4 2.3 44 129-172 58-104 (242)
429 1wzn_A SAM-dependent methyltra 97.9 4.5E-05 1.5E-09 64.2 8.5 47 65-114 39-85 (252)
430 3pfg_A N-methyltransferase; N, 97.9 2.4E-05 8.2E-10 66.4 6.7 58 53-113 36-93 (263)
431 3ou2_A SAM-dependent methyltra 97.9 3.6E-05 1.2E-09 63.0 7.6 53 54-110 34-86 (218)
432 2p35_A Trans-aconitate 2-methy 97.9 2E-05 6.9E-10 66.5 6.2 46 65-111 31-76 (259)
433 3bxo_A N,N-dimethyltransferase 97.9 4.4E-05 1.5E-09 63.5 8.2 55 55-112 28-82 (239)
434 3i9f_A Putative type 11 methyl 97.8 2E-05 6.7E-10 62.1 5.7 51 56-111 8-58 (170)
435 1r18_A Protein-L-isoaspartate( 97.8 2.7E-05 9.4E-10 64.6 6.8 48 128-175 81-136 (227)
436 3bgv_A MRNA CAP guanine-N7 met 97.8 4.7E-05 1.6E-09 66.4 8.6 60 53-114 20-79 (313)
437 3lkz_A Non-structural protein 97.8 0.00019 6.4E-09 61.1 11.7 102 127-236 90-207 (321)
438 2kw5_A SLR1183 protein; struct 97.8 3.4E-05 1.2E-09 62.6 7.1 47 64-114 27-73 (202)
439 2ipx_A RRNA 2'-O-methyltransfe 97.8 2.8E-05 9.7E-10 64.8 6.7 45 128-172 74-121 (233)
440 3e8s_A Putative SAM dependent 97.8 3.5E-05 1.2E-09 63.4 7.2 52 55-111 42-93 (227)
441 2efj_A 3,7-dimethylxanthine me 97.8 0.00012 4E-09 65.6 10.9 100 132-238 53-230 (384)
442 2avn_A Ubiquinone/menaquinone 97.8 4.4E-05 1.5E-09 64.7 7.9 53 57-112 44-96 (260)
443 1p91_A Ribosomal RNA large sub 97.8 4.3E-05 1.5E-09 65.0 7.8 57 55-112 72-129 (269)
444 2p7i_A Hypothetical protein; p 97.8 3.5E-05 1.2E-09 64.3 7.1 56 54-113 30-85 (250)
445 2plw_A Ribosomal RNA methyltra 97.8 2.7E-05 9.2E-10 63.2 6.1 38 65-102 20-58 (201)
446 3m70_A Tellurite resistance pr 97.8 5.3E-05 1.8E-09 65.1 8.3 55 55-114 110-164 (286)
447 4htf_A S-adenosylmethionine-de 97.8 6.6E-05 2.3E-09 64.5 8.7 46 66-114 67-112 (285)
448 4dcm_A Ribosomal RNA large sub 97.8 4.7E-05 1.6E-09 68.3 8.0 57 55-114 212-268 (375)
449 3thr_A Glycine N-methyltransfe 97.8 5E-05 1.7E-09 65.4 7.9 56 54-114 46-101 (293)
450 2nyu_A Putative ribosomal RNA 97.8 3.3E-05 1.1E-09 62.3 6.3 40 64-103 19-66 (196)
451 3g2m_A PCZA361.24; SAM-depende 97.8 3.6E-05 1.2E-09 66.7 6.9 56 53-114 71-126 (299)
452 3p2e_A 16S rRNA methylase; met 97.8 2.1E-05 7.1E-10 65.5 5.1 43 65-108 22-65 (225)
453 3dou_A Ribosomal RNA large sub 97.8 2.6E-05 8.8E-10 63.2 5.5 36 65-103 23-58 (191)
454 3mgg_A Methyltransferase; NYSG 97.8 4.5E-05 1.5E-09 65.1 7.4 49 65-114 35-83 (276)
455 2a14_A Indolethylamine N-methy 97.8 1.3E-05 4.6E-10 68.2 4.0 49 64-114 52-100 (263)
456 2p8j_A S-adenosylmethionine-de 97.8 8E-05 2.7E-09 60.6 8.5 58 54-114 11-68 (209)
457 3dli_A Methyltransferase; PSI- 97.8 3.5E-05 1.2E-09 64.4 6.4 46 63-111 37-82 (240)
458 2g72_A Phenylethanolamine N-me 97.8 3.3E-05 1.1E-09 66.6 6.3 57 55-113 59-115 (289)
459 1uwv_A 23S rRNA (uracil-5-)-me 97.8 6E-05 2.1E-09 69.0 8.3 58 54-114 271-330 (433)
460 3sm3_A SAM-dependent methyltra 97.8 3.9E-05 1.3E-09 63.5 6.5 47 65-114 28-74 (235)
461 1xtp_A LMAJ004091AAA; SGPP, st 97.8 4.4E-05 1.5E-09 64.2 6.8 48 65-114 91-138 (254)
462 3k6r_A Putative transferase PH 97.8 4E-05 1.4E-09 65.8 6.5 66 46-114 105-170 (278)
463 3opn_A Putative hemolysin; str 97.8 1.9E-05 6.6E-10 66.0 4.4 54 55-111 26-79 (232)
464 1y8c_A S-adenosylmethionine-de 97.8 7.8E-05 2.7E-09 62.1 8.2 58 54-114 24-81 (246)
465 2ozv_A Hypothetical protein AT 97.8 4.6E-05 1.6E-09 64.8 6.8 49 65-114 34-82 (260)
466 2vdw_A Vaccinia virus capping 97.7 7E-05 2.4E-09 65.2 7.8 46 67-114 48-93 (302)
467 3dmg_A Probable ribosomal RNA 97.7 6.1E-05 2.1E-09 67.7 7.6 57 55-114 217-277 (381)
468 3bzb_A Uncharacterized protein 97.7 7.4E-05 2.5E-09 64.3 7.8 57 55-113 65-124 (281)
469 4azs_A Methyltransferase WBDD; 97.7 5E-05 1.7E-09 72.0 7.3 88 58-164 57-146 (569)
470 3ofk_A Nodulation protein S; N 97.7 3.2E-05 1.1E-09 63.5 5.2 47 65-114 49-95 (216)
471 2bm8_A Cephalosporin hydroxyla 97.7 2E-05 7E-10 66.0 4.0 35 131-165 81-121 (236)
472 2ex4_A Adrenal gland protein A 97.7 4E-05 1.4E-09 64.1 5.8 58 55-114 64-124 (241)
473 3lcc_A Putative methyl chlorid 97.7 6E-05 2E-09 62.7 6.8 46 66-114 65-110 (235)
474 2oo3_A Protein involved in cat 97.7 1.9E-05 6.6E-10 67.3 3.7 97 131-234 91-199 (283)
475 3h2b_A SAM-dependent methyltra 97.7 6.4E-05 2.2E-09 61.0 6.7 42 68-112 42-83 (203)
476 3g5l_A Putative S-adenosylmeth 97.7 6.7E-05 2.3E-09 63.1 6.9 46 66-113 43-88 (253)
477 3cgg_A SAM-dependent methyltra 97.7 8.5E-05 2.9E-09 59.4 7.2 46 65-113 44-89 (195)
478 2fyt_A Protein arginine N-meth 97.7 8.1E-05 2.8E-09 65.9 7.6 47 65-114 62-108 (340)
479 2jjq_A Uncharacterized RNA met 97.7 9.7E-05 3.3E-09 67.4 8.2 59 52-114 276-334 (425)
480 1m6e_X S-adenosyl-L-methionnin 97.7 6.3E-05 2.2E-09 66.8 6.7 102 132-237 52-213 (359)
481 3hp7_A Hemolysin, putative; st 97.7 3.2E-05 1.1E-09 66.7 4.6 42 66-109 84-125 (291)
482 4dmg_A Putative uncharacterize 97.7 0.00016 5.3E-09 65.3 9.2 51 61-114 208-258 (393)
483 4hc4_A Protein arginine N-meth 97.7 6.2E-05 2.1E-09 67.4 6.3 47 65-114 81-127 (376)
484 1af7_A Chemotaxis receptor met 97.6 0.00016 5.5E-09 61.9 8.5 66 46-112 85-157 (274)
485 3frh_A 16S rRNA methylase; met 97.6 0.00017 5.9E-09 60.1 8.3 45 66-114 104-148 (253)
486 3bkw_A MLL3908 protein, S-aden 97.6 0.00012 4E-09 61.0 7.4 47 65-113 41-87 (243)
487 2y1w_A Histone-arginine methyl 97.6 0.00012 4.1E-09 65.0 7.8 47 65-114 48-94 (348)
488 3ajd_A Putative methyltransfer 97.6 9.2E-05 3.1E-09 63.4 6.8 44 129-172 81-127 (274)
489 1ri5_A MRNA capping enzyme; me 97.6 0.00017 5.8E-09 62.0 8.5 48 65-114 62-109 (298)
490 1ej0_A FTSJ; methyltransferase 97.6 0.00012 4.2E-09 57.4 6.4 41 64-105 19-59 (180)
491 1g6q_1 HnRNP arginine N-methyl 97.6 0.00013 4.5E-09 64.2 7.2 47 65-114 36-82 (328)
492 3tka_A Ribosomal RNA small sub 97.6 0.00012 4E-09 63.9 6.5 57 51-109 43-99 (347)
493 2igt_A SAM dependent methyltra 97.6 0.00023 8E-09 62.7 8.7 47 65-114 151-197 (332)
494 2aot_A HMT, histamine N-methyl 97.6 9.4E-05 3.2E-09 63.9 6.0 49 66-114 51-104 (292)
495 2gs9_A Hypothetical protein TT 97.6 0.00019 6.4E-09 58.5 7.5 49 59-112 28-76 (211)
496 2pjd_A Ribosomal RNA small sub 97.6 7.6E-05 2.6E-09 66.1 5.4 58 54-114 185-242 (343)
497 1g60_A Adenine-specific methyl 97.5 0.00024 8.1E-09 60.4 8.2 46 130-175 211-256 (260)
498 2r6z_A UPF0341 protein in RSP 97.5 9.7E-05 3.3E-09 62.8 5.8 47 65-114 81-134 (258)
499 3q7e_A Protein arginine N-meth 97.5 0.00013 4.5E-09 64.8 6.8 47 65-114 64-110 (349)
500 2i62_A Nicotinamide N-methyltr 97.5 7E-05 2.4E-09 63.3 4.8 48 65-114 54-101 (265)
No 1
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.90 E-value=1.2e-23 Score=177.51 Aligned_cols=189 Identities=29% Similarity=0.525 Sum_probs=158.1
Q ss_pred eeccCCCcCcCccccCCCCCCcccccccccccccccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhC
Q psy7837 11 LLDIPHNIGHNAFMESPSDYPVLTLLDIPHNIGHNAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVG 90 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~ 90 (299)
..++...++|+.|++. . +|.|.++++++++.++.|.+.+.+++.+...++++.+|||+|||+|+++..+++..+
T Consensus 34 ~~~a~~~~~r~~f~~~--~----~y~d~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~ 107 (227)
T 1r18_A 34 VAQAMKETDRKHYSPR--N----PYMDAPQPIGGGVTISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIK 107 (227)
T ss_dssp HHHHHHTSCGGGTCSS--C----TTBSSCEEEETTEEECCHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHcCCc--c----cccCCCcccCCCCccCChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcc
Confidence 4556667899999843 2 899999999999999999999999999976689999999999999999999998775
Q ss_pred C-----CceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHH
Q psy7837 91 I-----SGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNL 165 (299)
Q Consensus 91 ~-----~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~ 165 (299)
. .++++++|+++.+++.+++++....
T Consensus 108 ~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~------------------------------------------------- 138 (227)
T 1r18_A 108 AKGVDADTRIVGIEHQAELVRRSKANLNTDD------------------------------------------------- 138 (227)
T ss_dssp HSCCCTTCEEEEEESCHHHHHHHHHHHHHHH-------------------------------------------------
T ss_pred cccCCccCEEEEEEcCHHHHHHHHHHHHhcC-------------------------------------------------
Confidence 3 3689999999999998888776510
Q ss_pred HHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecchhhhHHHHHHHhccCCcEEEEEecCCCCcceeeeE
Q psy7837 166 CKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQAIRDIPWHIVDQLKLGGRMLFIKGHEDDIMTLELL 245 (299)
Q Consensus 166 ~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~ 245 (299)
... ....+++++.+|....+...++||+|+++..++++++++.++|||||++++.+......+.+..+
T Consensus 139 ----~~~--------~~~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~~~~l~~~ 206 (227)
T 1r18_A 139 ----RSM--------LDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGPDGGSQYMQQY 206 (227)
T ss_dssp ----HHH--------HHHTSEEEEESCGGGCCGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEESCSSSCEEEEEE
T ss_pred ----ccc--------cCCCceEEEECCcccCCCcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEEecCCCceEEEEE
Confidence 000 00357999999988755444789999999999999999999999999999999876666888888
Q ss_pred EeecCCceEEEEecceeccccc
Q psy7837 246 DKFVNGSVKTTVIHPHVYIHEL 267 (299)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~ 267 (299)
.+..++.+..+.+.++.|+ |+
T Consensus 207 ~~~~~~~~~~~~l~~~~~~-p~ 227 (227)
T 1r18_A 207 DKDANGKVEMTRLMGVMYV-PL 227 (227)
T ss_dssp EECTTSCEEEEEEEEECCC-CC
T ss_pred EEcCCCcEEEEEeccEEEe-eC
Confidence 8887888999999999998 75
No 2
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.89 E-value=3e-22 Score=168.77 Aligned_cols=198 Identities=33% Similarity=0.563 Sum_probs=161.6
Q ss_pred eccCCCcCcCccccCCCCCCcccccccccccccccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCC
Q psy7837 12 LDIPHNIGHNAFMESPSDYPVLTLLDIPHNIGHNAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGI 91 (299)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~ 91 (299)
.++...++|+.|.... .|.+.+.++..++.++.|.....+++.+...++++.+|||+|||+|+.+..+++..++
T Consensus 28 ~~a~~~~~r~~f~~~~------~y~~~~~~~~~~~~~~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~ 101 (226)
T 1i1n_A 28 FEVMLATDRSHYAKCN------PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGC 101 (226)
T ss_dssp HHHHHTSCGGGTCSSC------TTSSSCEEEETTEEECCHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCT
T ss_pred HHHHHhCCHHHcCCCc------cCCCCccccCCCceecCHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCC
Confidence 3444557888887422 7888888888899999999999999988766889999999999999999999999877
Q ss_pred CceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHH
Q psy7837 92 SGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMK 171 (299)
Q Consensus 92 ~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~ 171 (299)
.++++++|+++.+++.+++++....
T Consensus 102 ~~~v~~vD~s~~~~~~a~~~~~~~~------------------------------------------------------- 126 (226)
T 1i1n_A 102 TGKVIGIDHIKELVDDSVNNVRKDD------------------------------------------------------- 126 (226)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHHC-------------------------------------------------------
T ss_pred CcEEEEEeCCHHHHHHHHHHHHhhc-------------------------------------------------------
Confidence 7899999999999999988876510
Q ss_pred HHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecchhhhHHHHHHHhccCCcEEEEEecCCCCcceeeeEEeecCC
Q psy7837 172 NIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQAIRDIPWHIVDQLKLGGRMLFIKGHEDDIMTLELLDKFVNG 251 (299)
Q Consensus 172 ~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~ 251 (299)
... ....++.++.+|+.......++||+|+++.+++++++++.++|||||++++++.+....+.+..+.+..++
T Consensus 127 -~~~-----~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~ 200 (226)
T 1i1n_A 127 -PTL-----LSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDG 200 (226)
T ss_dssp -THH-----HHTSSEEEEESCGGGCCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEESCTTSCEEEEEEEECTTS
T ss_pred -ccc-----cCCCcEEEEECCcccCcccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEecCCCceEEEEEEEcCCC
Confidence 000 01458999999988655445789999999999999999999999999999999877666777778887788
Q ss_pred ceEEEEecceeccccccccccccccc
Q psy7837 252 SVKTTVIHPHVYIHELKSLEDQKRMF 277 (299)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (299)
.+....+.++.|+ |+......+..|
T Consensus 201 ~~~~~~~~~~~f~-p~~~~~~~~~~~ 225 (226)
T 1i1n_A 201 SIKMKPLMGVIYV-PLTDKEKQWSRW 225 (226)
T ss_dssp CEEEEEEEEECCC-BCCCHHHHCCCC
T ss_pred cEEEEEcCceEEE-eccCCccccccc
Confidence 8999999999999 998875444444
No 3
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.89 E-value=1.9e-22 Score=168.01 Aligned_cols=182 Identities=26% Similarity=0.401 Sum_probs=155.3
Q ss_pred eccCCCcCcCccccCCCCCCcccccccccccccccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCC
Q psy7837 12 LDIPHNIGHNAFMESPSDYPVLTLLDIPHNIGHNAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGI 91 (299)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~ 91 (299)
+++...++|+.|+ |..+...+|.+.+.+++.++.++.|.....+++.+. ++++.+|||+|||+|+++..+++.
T Consensus 26 ~~~~~~~~r~~f~--~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~vLdiG~G~G~~~~~la~~--- 98 (210)
T 3lbf_A 26 LNALAAVPREKFV--DEAFEQKAWDNIALPIGQGQTISQPYMVARMTELLE--LTPQSRVLEIGTGSGYQTAILAHL--- 98 (210)
T ss_dssp HHHHHHSCGGGGS--CGGGGGGTTSSSCEECTTSCEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH---
T ss_pred HHHHHhCCHHHcC--CcchhhhccCCCccccCCCCEeCCHHHHHHHHHhcC--CCCCCEEEEEcCCCCHHHHHHHHh---
Confidence 3455678899998 556778899999999999999999999999999886 889999999999999999999887
Q ss_pred CceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHH
Q psy7837 92 SGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMK 171 (299)
Q Consensus 92 ~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~ 171 (299)
.++++++|+++.+++.+++++..
T Consensus 99 ~~~v~~vD~~~~~~~~a~~~~~~--------------------------------------------------------- 121 (210)
T 3lbf_A 99 VQHVCSVERIKGLQWQARRRLKN--------------------------------------------------------- 121 (210)
T ss_dssp SSEEEEEESCHHHHHHHHHHHHH---------------------------------------------------------
T ss_pred CCEEEEEecCHHHHHHHHHHHHH---------------------------------------------------------
Confidence 35788888888888888887766
Q ss_pred HHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecchhhhHHHHHHHhccCCcEEEEEecCCCCcceeeeEEeecCC
Q psy7837 172 NIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQAIRDIPWHIVDQLKLGGRMLFIKGHEDDIMTLELLDKFVNG 251 (299)
Q Consensus 172 ~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~ 251 (299)
....+++++.+|........++||+|+++.+++++++.+.++|+|||++++++++ ..+.+..+.+ ..+
T Consensus 122 ---------~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~~--~~~~~~~~~~-~~~ 189 (210)
T 3lbf_A 122 ---------LDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPVGE--EHQYLKRVRR-RGG 189 (210)
T ss_dssp ---------TTCCSEEEEESCGGGCCGGGCCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEECS--SSCEEEEEEE-ETT
T ss_pred ---------cCCCceEEEECCcccCCccCCCccEEEEccchhhhhHHHHHhcccCcEEEEEEcC--CceEEEEEEE-cCC
Confidence 3455899999999876655678999999999999999999999999999999988 3466777777 456
Q ss_pred ceEEEEecceecccccccc
Q psy7837 252 SVKTTVIHPHVYIHELKSL 270 (299)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~ 270 (299)
.+..+.+.++.|+ |+.++
T Consensus 190 ~~~~~~~~~~~f~-pl~~~ 207 (210)
T 3lbf_A 190 EFIIDTVEAVRFV-PLVKG 207 (210)
T ss_dssp EEEEEEEEECCCC-BCCCS
T ss_pred eEEEEEeccEEEE-EccCc
Confidence 7999999999999 98875
No 4
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.88 E-value=1.8e-22 Score=170.24 Aligned_cols=186 Identities=20% Similarity=0.373 Sum_probs=156.6
Q ss_pred eeeccCCCcCcCccccCCCCCCcccccccccccccccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHh
Q psy7837 10 TLLDIPHNIGHNAFMESPSDYPVLTLLDIPHNIGHNAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMV 89 (299)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~ 89 (299)
..+++...++|+.|++. . +|.+.+.++..++.++.|...+.+++.+...++++.+|||+|||+|+++..+++..
T Consensus 29 ~v~~~~~~~~r~~f~p~--~----~y~d~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~ 102 (227)
T 2pbf_A 29 DVYNTMLQVDRGKYIKE--I----PYIDTPVYISHGVTISAPHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKM 102 (227)
T ss_dssp HHHHHHHTSCGGGTCSS--S----TTSSSCEEEETTEEECCHHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHT
T ss_pred HHHHHHHhCCHHHcCCc--c----cCCCCccccCCCCccCChHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHh
Confidence 34556678899999843 2 78899999999999999999999999987668999999999999999999999988
Q ss_pred C----CCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHH
Q psy7837 90 G----ISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNL 165 (299)
Q Consensus 90 ~----~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~ 165 (299)
+ +.++++++|+++.+++.+++++...
T Consensus 103 ~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-------------------------------------------------- 132 (227)
T 2pbf_A 103 NVLENKNSYVIGLERVKDLVNFSLENIKRD-------------------------------------------------- 132 (227)
T ss_dssp TTTTCTTCEEEEEESCHHHHHHHHHHHHHH--------------------------------------------------
T ss_pred cccCCCCCEEEEEeCCHHHHHHHHHHHHHc--------------------------------------------------
Confidence 6 6678999999999999888887761
Q ss_pred HHHHHHHHHhcCCccc----CCCCeEEEEcCCCCCC----CCCCCeeEEEecchhhhHHHHHHHhccCCcEEEEEecCCC
Q psy7837 166 CKRAMKNIRRGAPAIA----LAENFEFVCADGRRGY----PDAAPYDVIYISQAIRDIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 166 ~~~a~~~~~~~~~~~~----~~~~v~~~~~d~~~~~----~~~~~fD~v~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
. ...+++++.+|+.... ...++||+|+++..++++++++.++|+|||++++.+++.
T Consensus 133 ---------------~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~~~- 196 (227)
T 2pbf_A 133 ---------------KPELLKIDNFKIIHKNIYQVNEEEKKELGLFDAIHVGASASELPEILVDLLAENGKLIIPIEED- 196 (227)
T ss_dssp ---------------CGGGGSSTTEEEEECCGGGCCHHHHHHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEEET-
T ss_pred ---------------CccccccCCEEEEECChHhcccccCccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEccC-
Confidence 1 1468999999988754 444789999999999999999999999999999999863
Q ss_pred CcceeeeEEeecCCceEEEEecceeccccccc
Q psy7837 238 DIMTLELLDKFVNGSVKTTVIHPHVYIHELKS 269 (299)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (299)
..+.+..+.+ .++.+..+.+..+.|+ |+++
T Consensus 197 ~~~~~~~~~~-~~~~~~~~~~~~~~~~-pl~~ 226 (227)
T 2pbf_A 197 YTQVLYEITK-KNGKIIKDRLFDVCFV-SLKK 226 (227)
T ss_dssp TEEEEEEEEC-SCC-CEEEEEEEECCC-BCCC
T ss_pred CceEEEEEEE-eCCeEEEEEeccEEEE-eccC
Confidence 3467777777 6778999999999999 8865
No 5
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.88 E-value=3.3e-22 Score=169.67 Aligned_cols=189 Identities=29% Similarity=0.445 Sum_probs=159.5
Q ss_pred eeccCCCcCcCccccCCCCCCcccccccccccccccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhC
Q psy7837 11 LLDIPHNIGHNAFMESPSDYPVLTLLDIPHNIGHNAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVG 90 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~ 90 (299)
..++...++|+.|+ |+.+...+|.+.+.++..++.++.|.+...+++.+. ++++.+|||+|||+|+++..+++..+
T Consensus 39 ~~~a~~~v~r~~f~--~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~vLdiG~G~G~~~~~la~~~~ 114 (235)
T 1jg1_A 39 VERAFLKYPRYLSV--EDKYKKYAHIDEPLPIPAGQTVSAPHMVAIMLEIAN--LKPGMNILEVGTGSGWNAALISEIVK 114 (235)
T ss_dssp HHHHHHHSCGGGGS--CGGGGGGTTSSSCEECSTTCEECCHHHHHHHHHHHT--CCTTCCEEEECCTTSHHHHHHHHHHC
T ss_pred HHHHHHhCCHhhhC--CchhhhcCccCCCcccCCCceeccHHHHHHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHhC
Confidence 34455678899998 556888899999999999999999999999999886 88999999999999999999999875
Q ss_pred CCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHH
Q psy7837 91 ISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAM 170 (299)
Q Consensus 91 ~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~ 170 (299)
++++++|+++.+++.+++++..
T Consensus 115 --~~v~~vD~~~~~~~~a~~~~~~-------------------------------------------------------- 136 (235)
T 1jg1_A 115 --TDVYTIERIPELVEFAKRNLER-------------------------------------------------------- 136 (235)
T ss_dssp --SCEEEEESCHHHHHHHHHHHHH--------------------------------------------------------
T ss_pred --CEEEEEeCCHHHHHHHHHHHHH--------------------------------------------------------
Confidence 5799999999988888888776
Q ss_pred HHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecchhhhHHHHHHHhccCCcEEEEEecCCCCcceeeeEEeecC
Q psy7837 171 KNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQAIRDIPWHIVDQLKLGGRMLFIKGHEDDIMTLELLDKFVN 250 (299)
Q Consensus 171 ~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~ 250 (299)
....+++++.+|....+....+||+|+++.+++++++++.++|+|||++++++++....+.+..+.+ .+
T Consensus 137 ----------~~~~~v~~~~~d~~~~~~~~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~~~~~~~~l~~~~~-~~ 205 (235)
T 1jg1_A 137 ----------AGVKNVHVILGDGSKGFPPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVGSYHLWQELLEVRK-TK 205 (235)
T ss_dssp ----------TTCCSEEEEESCGGGCCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEECSSSSCEEEEEEEE-ET
T ss_pred ----------cCCCCcEEEECCcccCCCCCCCccEEEECCcHHHHHHHHHHhcCCCcEEEEEEecCCCccEEEEEEE-eC
Confidence 3455799999998554444456999999999999999999999999999999988765567777777 56
Q ss_pred CceEEEEecceeccccccccccc
Q psy7837 251 GSVKTTVIHPHVYIHELKSLEDQ 273 (299)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~ 273 (299)
+.+..+.+.++.|+ |++.....
T Consensus 206 ~~~~~~~~~~~~f~-p~~~~~~~ 227 (235)
T 1jg1_A 206 DGIKIKNHGGVAFV-PLIGEYGW 227 (235)
T ss_dssp TEEEEEEEEEECCC-BCBSTTSB
T ss_pred CeEEEEEeccEEEE-EccCCCcc
Confidence 78999999999999 99877433
No 6
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.87 E-value=1.9e-21 Score=162.51 Aligned_cols=187 Identities=33% Similarity=0.483 Sum_probs=157.8
Q ss_pred eeeccCCCcCcCccccCCCCCCcccccccccccccccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHh
Q psy7837 10 TLLDIPHNIGHNAFMESPSDYPVLTLLDIPHNIGHNAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMV 89 (299)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~ 89 (299)
..+++...++|+.|+ |..+...+|.+.+.++..++.++.|.....+++.+. +.++.+|||+|||+|.++..+++..
T Consensus 24 ~v~~a~~~~~r~~~~--~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~ 99 (215)
T 2yxe_A 24 RVIDALLKVPREEFL--PEHLKEYAYVDTPLEIGYGQTISAIHMVGMMCELLD--LKPGMKVLEIGTGCGYHAAVTAEIV 99 (215)
T ss_dssp HHHHHHHHSCGGGGS--CGGGGGGTTSCSCEEEETTEEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHcC--CchhhhhcccCCCccCCCCcEeCcHHHHHHHHHhhC--CCCCCEEEEECCCccHHHHHHHHHh
Confidence 345566678899998 556778889999999999999999999988888875 8899999999999999999999988
Q ss_pred CCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHH
Q psy7837 90 GISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRA 169 (299)
Q Consensus 90 ~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a 169 (299)
++.++++++|+++.+++.+++++..
T Consensus 100 ~~~~~v~~vD~~~~~~~~a~~~~~~------------------------------------------------------- 124 (215)
T 2yxe_A 100 GEDGLVVSIERIPELAEKAERTLRK------------------------------------------------------- 124 (215)
T ss_dssp CTTSEEEEEESCHHHHHHHHHHHHH-------------------------------------------------------
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHH-------------------------------------------------------
Confidence 7667899999999999888887766
Q ss_pred HHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecchhhhHHHHHHHhccCCcEEEEEecCCCCcceeeeEEeec
Q psy7837 170 MKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQAIRDIPWHIVDQLKLGGRMLFIKGHEDDIMTLELLDKFV 249 (299)
Q Consensus 170 ~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~ 249 (299)
....+++++.+|........++||+|+++.+++++++++.++|+|||++++.+++.. +.+..+.+.
T Consensus 125 -----------~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~~~~--~~~~~~~~~- 190 (215)
T 2yxe_A 125 -----------LGYDNVIVIVGDGTLGYEPLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVGRYL--QRLVLAEKR- 190 (215)
T ss_dssp -----------HTCTTEEEEESCGGGCCGGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEESSSS--EEEEEEEEE-
T ss_pred -----------cCCCCeEEEECCcccCCCCCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEECCCC--cEEEEEEEe-
Confidence 244579999999876554457899999999999999999999999999999998764 677777775
Q ss_pred CCceEEEEecceecccccccc
Q psy7837 250 NGSVKTTVIHPHVYIHELKSL 270 (299)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~ 270 (299)
.+.+....+.++.|+ |+...
T Consensus 191 ~~~~~~~~~~~~~~~-p~~~~ 210 (215)
T 2yxe_A 191 GDEIIIKDCGPVAFV-PLVGK 210 (215)
T ss_dssp TTEEEEEEEEEECCC-BCBST
T ss_pred CCEEEEEEeccEEEE-ecccc
Confidence 457999999999999 77654
No 7
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.82 E-value=9.5e-20 Score=161.36 Aligned_cols=189 Identities=28% Similarity=0.406 Sum_probs=153.4
Q ss_pred eeeccCCCcCcCccccCCCCCC-ccccccccc-ccccc---cccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHH
Q psy7837 10 TLLDIPHNIGHNAFMESPSDYP-VLTLLDIPH-NIGHN---AFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTL 84 (299)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~-~~~y~~~~~-~~~~~---~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~ 84 (299)
..+++...++|+.|++. ... ..+|.+.+. ++..+ +..+.|.+...+++.+. +++|++|||+|||+|.++..
T Consensus 17 ~v~~a~~~vpr~~fl~~--~~~y~~~y~~~~~~~l~~~~f~q~~~~~~~~~~l~~~l~--~~~~~~VLDiGcG~G~~~~~ 92 (317)
T 1dl5_A 17 HIAKAFLEIPREEFLTK--SYPLSYVYEDIVLVSYDDGEEYSTSSQPSLMALFMEWVG--LDKGMRVLEIGGGTGYNAAV 92 (317)
T ss_dssp HHHHHHHHSCGGGGCSS--CCCHHHHTSSSCEEEEECSSCEEEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHH
T ss_pred HHHHHHHhCCHHHhCCc--hhccccCccCCCcccccCCCcceeccCHHHHHHHHHhcC--CCCcCEEEEecCCchHHHHH
Confidence 45567778999999844 344 557888888 88888 88889999988888886 88999999999999999999
Q ss_pred HHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChH
Q psy7837 85 FGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKN 164 (299)
Q Consensus 85 la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~ 164 (299)
+++..+..++++++|+++.+++.+++++..
T Consensus 93 la~~~~~~~~v~gvD~s~~~~~~a~~~~~~-------------------------------------------------- 122 (317)
T 1dl5_A 93 MSRVVGEKGLVVSVEYSRKICEIAKRNVER-------------------------------------------------- 122 (317)
T ss_dssp HHHHHCTTCEEEEEESCHHHHHHHHHHHHH--------------------------------------------------
T ss_pred HHHhcCCCCEEEEEECCHHHHHHHHHHHHH--------------------------------------------------
Confidence 999876567899999999999888888766
Q ss_pred HHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecchhhhHHHHHHHhccCCcEEEEEecCCC-Ccceee
Q psy7837 165 LCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQAIRDIPWHIVDQLKLGGRMLFIKGHED-DIMTLE 243 (299)
Q Consensus 165 ~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~-~~~~~~ 243 (299)
.+..+++++.+|+....+..++||+|+++.+++++.+.+.++|||||++++.+.+.. ..+.+.
T Consensus 123 ----------------~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~~~~~~~ 186 (317)
T 1dl5_A 123 ----------------LGIENVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPINLKLSRRQPAF 186 (317)
T ss_dssp ----------------TTCCSEEEEESCGGGCCGGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEBCBGGGTBCEEE
T ss_pred ----------------cCCCCeEEEECChhhccccCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEECCCCcccceEE
Confidence 345679999999987555457899999999999999999999999999999986653 124455
Q ss_pred eEEeecCCceEEEEecceecccccccc
Q psy7837 244 LLDKFVNGSVKTTVIHPHVYIHELKSL 270 (299)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (299)
.+.+.. ..+..+.+++..|. |....
T Consensus 187 ~~~~~~-~~~~~~~i~~~~~~-p~~~~ 211 (317)
T 1dl5_A 187 LFKKKD-PYLVGNYKLETRFI-TAGGN 211 (317)
T ss_dssp EEEEET-TEEEEEEEEECCCC-BCCGG
T ss_pred EEEEeC-CcEEEEEeccEEEE-EccCc
Confidence 555543 46888888888888 77653
No 8
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.80 E-value=1.9e-19 Score=151.90 Aligned_cols=182 Identities=25% Similarity=0.334 Sum_probs=146.3
Q ss_pred eeccCCCcCcCccccCCCCCCccccc--ccccccccccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHH
Q psy7837 11 LLDIPHNIGHNAFMESPSDYPVLTLL--DIPHNIGHNAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAM 88 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~y~--~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~ 88 (299)
.+++...++|+.|+ ++.+...+|. +...++..++.+..|.+...+++.+. +.++.+|||+|||+|.++..+++.
T Consensus 16 v~~a~~~v~r~~f~--~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~ 91 (231)
T 1vbf_A 16 LAEAFNKVDRSLFL--PENLKDYAYAHTHEALPILPGINTTALNLGIFMLDELD--LHKGQKVLEIGTGIGYYTALIAEI 91 (231)
T ss_dssp HHHHHHHSCHHHHS--CGGGGGGSSSSTTCCEEEETTEEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH
T ss_pred HHHHHHhCCHHHcC--CcchhhhccccCCCceeeCCCCccCCHHHHHHHHHhcC--CCCCCEEEEEcCCCCHHHHHHHHH
Confidence 34566678999997 5567888899 99999999999999999988888886 889999999999999999999876
Q ss_pred hCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHH
Q psy7837 89 VGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKR 168 (299)
Q Consensus 89 ~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~ 168 (299)
. .+++++|+++.+++.+++++..
T Consensus 92 ~---~~v~~vD~~~~~~~~a~~~~~~------------------------------------------------------ 114 (231)
T 1vbf_A 92 V---DKVVSVEINEKMYNYASKLLSY------------------------------------------------------ 114 (231)
T ss_dssp S---SEEEEEESCHHHHHHHHHHHTT------------------------------------------------------
T ss_pred c---CEEEEEeCCHHHHHHHHHHHhh------------------------------------------------------
Confidence 4 4688888888777777766654
Q ss_pred HHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecchhhhHHHHHHHhccCCcEEEEEecCCCCcceeeeEEee
Q psy7837 169 AMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQAIRDIPWHIVDQLKLGGRMLFIKGHEDDIMTLELLDKF 248 (299)
Q Consensus 169 a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~ 248 (299)
.. +++++.+|+....+..++||+|+++.+++++.+++.++|+|||++++..++.. ...+..+.+
T Consensus 115 ------------~~--~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~~~~-~~~~~~~~~- 178 (231)
T 1vbf_A 115 ------------YN--NIKLILGDGTLGYEEEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPIGVGR-VQKLYKVIK- 178 (231)
T ss_dssp ------------CS--SEEEEESCGGGCCGGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEECSSS-SEEEEEEEC-
T ss_pred ------------cC--CeEEEECCcccccccCCCccEEEECCcHHHHHHHHHHHcCCCcEEEEEEcCCC-ccEEEEEEE-
Confidence 22 89999999887444457899999999999999999999999999999987664 344555555
Q ss_pred cCCceEEEEecceecccccccc
Q psy7837 249 VNGSVKTTVIHPHVYIHELKSL 270 (299)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~ 270 (299)
..+.+....+.+..|. |+...
T Consensus 179 ~~~~~~~~~~~~~~~~-~~~~~ 199 (231)
T 1vbf_A 179 KGNSPSLENLGEVMFG-RIGGL 199 (231)
T ss_dssp CTTSCEEEEEEEECCC-BCCST
T ss_pred cCCeeEEEEeccEEEE-EcCCc
Confidence 3455777777787787 66544
No 9
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.64 E-value=5.7e-15 Score=122.34 Aligned_cols=105 Identities=19% Similarity=0.195 Sum_probs=90.0
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCC-CeEEEEcCCCCCCCCCCCeeEE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAE-NFEFVCADGRRGYPDAAPYDVI 206 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v 206 (299)
...++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++++. .+.. +++++.+|+........+||+|
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~-----~g~~~~v~~~~~d~~~~~~~~~~~D~v 126 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDT-----YGLSPRMRAVQGTAPAALADLPLPEAV 126 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----TTCTTTEEEEESCTTGGGTTSCCCSEE
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH-----cCCCCCEEEEeCchhhhcccCCCCCEE
Confidence 456789999999999999999999999999999999999999999987 3444 8999999998744444679999
Q ss_pred Eecchhhh-HHHHHHHhccCCcEEEEEecCCC
Q psy7837 207 YISQAIRD-IPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 207 ~~~~~~~~-~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
+++..... +.+++.++|+|||++++......
T Consensus 127 ~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 158 (204)
T 3njr_A 127 FIGGGGSQALYDRLWEWLAPGTRIVANAVTLE 158 (204)
T ss_dssp EECSCCCHHHHHHHHHHSCTTCEEEEEECSHH
T ss_pred EECCcccHHHHHHHHHhcCCCcEEEEEecCcc
Confidence 99876533 78899999999999999887643
No 10
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.63 E-value=1.6e-15 Score=130.38 Aligned_cols=115 Identities=16% Similarity=0.222 Sum_probs=89.7
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCC
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGIS-GKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYG 132 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~-g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 132 (299)
+..+...+...+++|.+|||+|||+|..+..+++.+... .+++|+|+++.|++.|++++...
T Consensus 57 ~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~----------------- 119 (261)
T 4gek_A 57 ISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAY----------------- 119 (261)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTS-----------------
T ss_pred HHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhh-----------------
Confidence 344444445568999999999999999999999887653 37888888888888877777652
Q ss_pred CeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecchh
Q psy7837 133 SKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQAI 212 (299)
Q Consensus 133 ~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~ 212 (299)
....+++++++|+..... +.||+|+++.++
T Consensus 120 ------------------------------------------------~~~~~v~~~~~D~~~~~~--~~~d~v~~~~~l 149 (261)
T 4gek_A 120 ------------------------------------------------KAPTPVDVIEGDIRDIAI--ENASMVVLNFTL 149 (261)
T ss_dssp ------------------------------------------------CCSSCEEEEESCTTTCCC--CSEEEEEEESCG
T ss_pred ------------------------------------------------ccCceEEEeecccccccc--cccccceeeeee
Confidence 345689999999987544 459999999887
Q ss_pred hhH--------HHHHHHhccCCcEEEEEecC
Q psy7837 213 RDI--------PWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 213 ~~~--------~~~~~~~L~~gG~lv~~~~~ 235 (299)
+++ .++++++|||||.+++....
T Consensus 150 ~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 150 QFLEPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred eecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 643 46899999999999997654
No 11
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.62 E-value=1.4e-14 Score=119.72 Aligned_cols=104 Identities=21% Similarity=0.226 Sum_probs=89.8
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcC--CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMG--AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDV 205 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 205 (299)
...++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.++++++. ....+++++.+|+........+||+
T Consensus 37 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~~D~ 111 (204)
T 3e05_A 37 RLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKK-----FVARNVTLVEAFAPEGLDDLPDPDR 111 (204)
T ss_dssp TCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHH-----HTCTTEEEEECCTTTTCTTSCCCSE
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH-----hCCCcEEEEeCChhhhhhcCCCCCE
Confidence 55778999999999999999999886 7899999999999999999987 3457899999999765554467999
Q ss_pred EEecchh---hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 206 IYISQAI---RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 206 v~~~~~~---~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
|+++.+. ..+.+++.++|+|||++++.....
T Consensus 112 i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 145 (204)
T 3e05_A 112 VFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTL 145 (204)
T ss_dssp EEESCCTTCHHHHHHHHHHHCCTTCEEEEEECBH
T ss_pred EEECCCCcCHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 9999874 556689999999999999987653
No 12
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.61 E-value=4.6e-15 Score=124.55 Aligned_cols=115 Identities=23% Similarity=0.293 Sum_probs=90.8
Q ss_pred chHHHHHHHHhc-cCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccC
Q psy7837 52 SDHCLVLELLSG-HLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLV 130 (299)
Q Consensus 52 ~~~~~~~~~l~~-~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 130 (299)
.+.+.++..|.. .++||++|||+|||+|+++..+++.+|++|+|+++|+++.+++.+++....
T Consensus 61 klaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~---------------- 124 (233)
T 4df3_A 61 KLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD---------------- 124 (233)
T ss_dssp HHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT----------------
T ss_pred HHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh----------------
Confidence 344555544432 379999999999999999999999999999999999999999887765543
Q ss_pred CCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC---CCCCCCeeEEE
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG---YPDAAPYDVIY 207 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~fD~v~ 207 (299)
..|+..+.+|.... .....++|+|+
T Consensus 125 ----------------------------------------------------~~ni~~V~~d~~~p~~~~~~~~~vDvVf 152 (233)
T 4df3_A 125 ----------------------------------------------------RRNIFPILGDARFPEKYRHLVEGVDGLY 152 (233)
T ss_dssp ----------------------------------------------------CTTEEEEESCTTCGGGGTTTCCCEEEEE
T ss_pred ----------------------------------------------------hcCeeEEEEeccCccccccccceEEEEE
Confidence 35888898887642 23347899999
Q ss_pred ecchhhh----HHHHHHHhccCCcEEEEEec
Q psy7837 208 ISQAIRD----IPWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 208 ~~~~~~~----~~~~~~~~L~~gG~lv~~~~ 234 (299)
++...++ +..++.+.|||||++++++.
T Consensus 153 ~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ik 183 (233)
T 4df3_A 153 ADVAQPEQAAIVVRNARFFLRDGGYMLMAIK 183 (233)
T ss_dssp ECCCCTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EeccCChhHHHHHHHHHHhccCCCEEEEEEe
Confidence 8877654 45688899999999999753
No 13
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.61 E-value=1.4e-15 Score=125.86 Aligned_cols=105 Identities=17% Similarity=0.121 Sum_probs=81.9
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCC-------cccCCCCeEEEEcCCCCCCCCC-
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAP-------AIALAENFEFVCADGRRGYPDA- 200 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~-------~~~~~~~v~~~~~d~~~~~~~~- 200 (299)
+.++.+|||+|||+|..+..+++.|.+|+|+|+|+.|++.|+++...... ......+++++++|+.......
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 45788999999999999999999999999999999999999987642000 0001358999999998765443
Q ss_pred CCeeEEEecchhhhH--------HHHHHHhccCCcEEEEEe
Q psy7837 201 APYDVIYISQAIRDI--------PWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 201 ~~fD~v~~~~~~~~~--------~~~~~~~L~~gG~lv~~~ 233 (299)
++||+|++..+++++ .+++.++|||||++++.+
T Consensus 100 ~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 689999987776543 357899999999855443
No 14
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.60 E-value=9.2e-15 Score=124.87 Aligned_cols=104 Identities=23% Similarity=0.241 Sum_probs=88.6
Q ss_pred hcccCCCCeEEEEcCCCcHHHHHHHHc-CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCee
Q psy7837 126 YGHLVYGSKVLDIGSGSGYLSALFAYM-GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYD 204 (299)
Q Consensus 126 ~~~~~~~~~vLDiG~G~G~~~~~la~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 204 (299)
...+.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.++++++.. +...+++++++|+..... .++||
T Consensus 31 ~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~----~~~~~v~~~~~d~~~~~~-~~~fD 105 (256)
T 1nkv_A 31 VLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEEL----GVSERVHFIHNDAAGYVA-NEKCD 105 (256)
T ss_dssp HTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHT----TCTTTEEEEESCCTTCCC-SSCEE
T ss_pred hcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhc----CCCcceEEEECChHhCCc-CCCCC
Confidence 345678899999999999999999876 789999999999999999998763 233589999999987655 57899
Q ss_pred EEEecchhhhH------HHHHHHhccCCcEEEEEec
Q psy7837 205 VIYISQAIRDI------PWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 205 ~v~~~~~~~~~------~~~~~~~L~~gG~lv~~~~ 234 (299)
+|++..+++++ .+++.++|||||++++..+
T Consensus 106 ~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 106 VAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp EEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred EEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence 99998877654 5789999999999999764
No 15
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.60 E-value=7.3e-15 Score=125.95 Aligned_cols=102 Identities=23% Similarity=0.285 Sum_probs=87.8
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
...++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.++++++. ....++.++.+|+.....+.++||+|+
T Consensus 34 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~-----~~~~~v~~~~~d~~~l~~~~~~fD~V~ 108 (260)
T 1vl5_A 34 ALKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEG-----NGHQQVEYVQGDAEQMPFTDERFHIVT 108 (260)
T ss_dssp TCCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHH-----TTCCSEEEEECCC-CCCSCTTCEEEEE
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHh-----cCCCceEEEEecHHhCCCCCCCEEEEE
Confidence 446789999999999999999999988999999999999999999877 345689999999987655567899999
Q ss_pred ecchhhh------HHHHHHHhccCCcEEEEEec
Q psy7837 208 ISQAIRD------IPWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 208 ~~~~~~~------~~~~~~~~L~~gG~lv~~~~ 234 (299)
+..++++ +.+++.++|||||.+++...
T Consensus 109 ~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 109 CRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 9988865 44689999999999999743
No 16
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.60 E-value=1.1e-14 Score=118.24 Aligned_cols=103 Identities=21% Similarity=0.216 Sum_probs=82.8
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC-CCCCCeeEE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY-PDAAPYDVI 206 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v 206 (299)
.+.++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.++++++. ....++++++.|..... ...++||+|
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~-----~~~~~v~~~~~~~~~l~~~~~~~fD~v 93 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSD-----LGIENTELILDGHENLDHYVREPIRAA 93 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHH-----HTCCCEEEEESCGGGGGGTCCSCEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHH-----cCCCcEEEEeCcHHHHHhhccCCcCEE
Confidence 456789999999999999999999999999999999999999999987 34478999997765421 124689999
Q ss_pred Eecchh-h--------------hHHHHHHHhccCCcEEEEEecC
Q psy7837 207 YISQAI-R--------------DIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 207 ~~~~~~-~--------------~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
+++... + ...+++.++|||||++++....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 94 IFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred EEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 987321 1 2336889999999999998754
No 17
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.59 E-value=8.1e-15 Score=130.61 Aligned_cols=146 Identities=21% Similarity=0.267 Sum_probs=111.4
Q ss_pred cccccccccccccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH
Q psy7837 34 TLLDIPHNIGHNAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 113 (299)
Q Consensus 34 ~y~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~ 113 (299)
.|.+....+..++.+..|.....+++.+. +.+|.+|||+|||+|+++..+++.+++.++++++|+++.+++.+++++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~--~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~ 151 (336)
T 2b25_A 74 ALEDYVVLMKRGTAITFPKDINMILSMMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYK 151 (336)
T ss_dssp CHHHHHHHSCCSSCCCCHHHHHHHHHHHT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHH
T ss_pred CHHHHhhhhcCCCcccCHHHHHHHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH
Confidence 45556667888899999998889998886 8999999999999999999999998888899999999999999998887
Q ss_pred HhHHHHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCC
Q psy7837 114 AKAETYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADG 193 (299)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 193 (299)
.... ....+.- .....+++++.+|+
T Consensus 152 ~~~~------------------------------------------------------~~~ln~~-~~~~~~v~~~~~d~ 176 (336)
T 2b25_A 152 HWRD------------------------------------------------------SWKLSHV-EEWPDNVDFIHKDI 176 (336)
T ss_dssp HHHH------------------------------------------------------HHTTTCS-SCCCCCEEEEESCT
T ss_pred Hhhc------------------------------------------------------ccccccc-cccCCceEEEECCh
Confidence 5200 0000000 00236899999999
Q ss_pred CCCC--CCCCCeeEEEecchhhh-HHHHHHHhccCCcEEEEEecCC
Q psy7837 194 RRGY--PDAAPYDVIYISQAIRD-IPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 194 ~~~~--~~~~~fD~v~~~~~~~~-~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
.... ...++||+|+++....+ +.+++.++|+|||.+++..+..
T Consensus 177 ~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 222 (336)
T 2b25_A 177 SGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVVNI 222 (336)
T ss_dssp TCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEESSH
T ss_pred HHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 8753 23467999999876544 5789999999999999987653
No 18
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.59 E-value=2.1e-14 Score=124.24 Aligned_cols=104 Identities=16% Similarity=0.217 Sum_probs=87.4
Q ss_pred hhcccCCCCeEEEEcCCCcHHH-HHHHH-cCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCC
Q psy7837 125 FYGHLVYGSKVLDIGSGSGYLS-ALFAY-MGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAP 202 (299)
Q Consensus 125 ~~~~~~~~~~vLDiG~G~G~~~-~~la~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 202 (299)
.++.+.++.+|||||||+|.++ ..+++ .+++|+++|+++.+++.|+++++.. +..+++++++|+.... .++
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~-----gl~~v~~v~gDa~~l~--d~~ 188 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGL-----GVDGVNVITGDETVID--GLE 188 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHH-----TCCSEEEEESCGGGGG--GCC
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhc-----CCCCeEEEECchhhCC--CCC
Confidence 3567899999999999998766 45565 4899999999999999999999873 3489999999998743 478
Q ss_pred eeEEEecchhh---hHHHHHHHhccCCcEEEEEecC
Q psy7837 203 YDVIYISQAIR---DIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 203 fD~v~~~~~~~---~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
||+|++..... .+.+++.++|||||++++....
T Consensus 189 FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 189 FDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp CSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred cCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 99999877654 5778999999999999998754
No 19
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.58 E-value=6.4e-15 Score=125.93 Aligned_cols=104 Identities=14% Similarity=0.061 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhc-------C-Ccc----cCCCCeEEEEcCCCCCC
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRG-------A-PAI----ALAENFEFVCADGRRGY 197 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~-------~-~~~----~~~~~v~~~~~d~~~~~ 197 (299)
.++.+|||+|||+|..+..+++.|.+|+|+|+|+.+++.|+++.... . ... ....+++++++|+....
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 46889999999999999999999999999999999999998765310 0 000 01358999999998754
Q ss_pred CCC-CCeeEEEecchhhh--------HHHHHHHhccCCcEEEEEe
Q psy7837 198 PDA-APYDVIYISQAIRD--------IPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 198 ~~~-~~fD~v~~~~~~~~--------~~~~~~~~L~~gG~lv~~~ 233 (299)
... ++||+|++..++.+ +.+++.++|||||++++.+
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 432 78999998777643 3457899999999997543
No 20
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.58 E-value=2.8e-14 Score=122.85 Aligned_cols=108 Identities=20% Similarity=0.211 Sum_probs=90.9
Q ss_pred hhhcccCCCCeEEEEcCCCcHHHHHHHHcC-CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCC
Q psy7837 124 NFYGHLVYGSKVLDIGSGSGYLSALFAYMG-AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAP 202 (299)
Q Consensus 124 ~~~~~~~~~~~vLDiG~G~G~~~~~la~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 202 (299)
..+..+.++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.++++++.. +...+++++++|+.......++
T Consensus 39 ~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~~~~~ 114 (267)
T 3kkz_A 39 SFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQS----GLQNRVTGIVGSMDDLPFRNEE 114 (267)
T ss_dssp TTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHT----TCTTTEEEEECCTTSCCCCTTC
T ss_pred HhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHc----CCCcCcEEEEcChhhCCCCCCC
Confidence 334456789999999999999999999885 48999999999999999998873 3446799999999876555688
Q ss_pred eeEEEecchhhhH-----HHHHHHhccCCcEEEEEecC
Q psy7837 203 YDVIYISQAIRDI-----PWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 203 fD~v~~~~~~~~~-----~~~~~~~L~~gG~lv~~~~~ 235 (299)
||+|++..+++++ .+++.++|||||.+++....
T Consensus 115 fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 115 LDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp EEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred EEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEee
Confidence 9999999987654 46899999999999998653
No 21
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.58 E-value=2.6e-14 Score=115.09 Aligned_cols=106 Identities=19% Similarity=0.226 Sum_probs=87.5
Q ss_pred cccCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCC-CCe
Q psy7837 127 GHLVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDA-APY 203 (299)
Q Consensus 127 ~~~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~f 203 (299)
....++.+|||+|||+|.++..+++. +.+|+++|+++.+++.++++++.+ +...++ ++.+|.....+.. ++|
T Consensus 21 ~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~~~-~~~~d~~~~~~~~~~~~ 95 (178)
T 3hm2_A 21 LAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINL----GVSDRI-AVQQGAPRAFDDVPDNP 95 (178)
T ss_dssp HCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTT----TCTTSE-EEECCTTGGGGGCCSCC
T ss_pred hcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHh----CCCCCE-EEecchHhhhhccCCCC
Confidence 35677889999999999999999987 678999999999999999999873 223378 8888886544332 689
Q ss_pred eEEEecchhhh--HHHHHHHhccCCcEEEEEecCCC
Q psy7837 204 DVIYISQAIRD--IPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 204 D~v~~~~~~~~--~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
|+|+++.++++ +.+++.++|+|||++++......
T Consensus 96 D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 131 (178)
T 3hm2_A 96 DVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAVTVE 131 (178)
T ss_dssp SEEEECC-TTCTTHHHHHHHTCCTTCEEEEEECSHH
T ss_pred CEEEECCcccHHHHHHHHHHhcCCCCEEEEEeeccc
Confidence 99999998876 78899999999999999876543
No 22
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.57 E-value=2.6e-14 Score=122.10 Aligned_cols=109 Identities=18% Similarity=0.194 Sum_probs=91.2
Q ss_pred HhhhcccCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCC
Q psy7837 123 INFYGHLVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAA 201 (299)
Q Consensus 123 ~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 201 (299)
+..+..+.++.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++++.. +...+++++++|+.......+
T Consensus 38 l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~~d~~~~~~~~~ 113 (257)
T 3f4k_A 38 VSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKA----NCADRVKGITGSMDNLPFQNE 113 (257)
T ss_dssp HTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHT----TCTTTEEEEECCTTSCSSCTT
T ss_pred HHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHc----CCCCceEEEECChhhCCCCCC
Confidence 33445667889999999999999999998854 9999999999999999998873 334569999999987655568
Q ss_pred CeeEEEecchhhh-----HHHHHHHhccCCcEEEEEecC
Q psy7837 202 PYDVIYISQAIRD-----IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 202 ~fD~v~~~~~~~~-----~~~~~~~~L~~gG~lv~~~~~ 235 (299)
+||+|++..++++ +.+++.++|+|||++++....
T Consensus 114 ~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 114 ELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp CEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred CEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEee
Confidence 8999999888765 457899999999999998743
No 23
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.57 E-value=2.4e-14 Score=121.32 Aligned_cols=108 Identities=19% Similarity=0.216 Sum_probs=91.9
Q ss_pred HhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCC
Q psy7837 123 INFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAP 202 (299)
Q Consensus 123 ~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 202 (299)
+.....+.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++++. ....++.++.+|+.......++
T Consensus 13 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~ 87 (239)
T 1xxl_A 13 MIKTAECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQE-----KGVENVRFQQGTAESLPFPDDS 87 (239)
T ss_dssp HHHHHTCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHH-----HTCCSEEEEECBTTBCCSCTTC
T ss_pred HHHHhCcCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHH-----cCCCCeEEEecccccCCCCCCc
Confidence 33445667899999999999999999999999999999999999999999877 3556899999999876555678
Q ss_pred eeEEEecchhhh------HHHHHHHhccCCcEEEEEecC
Q psy7837 203 YDVIYISQAIRD------IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 203 fD~v~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~ 235 (299)
||+|++..++++ +.+++.++|+|||.+++....
T Consensus 88 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 88 FDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 999999988754 346899999999999997543
No 24
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.57 E-value=2.4e-14 Score=122.35 Aligned_cols=125 Identities=28% Similarity=0.286 Sum_probs=102.2
Q ss_pred cccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHH
Q psy7837 44 HNAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRI 123 (299)
Q Consensus 44 ~~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~ 123 (299)
.......|.....+++.+. +.++.+|||+|||+|.++..+++.+++.++++++|+++.+++.+++++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~--------- 143 (258)
T 2pwy_A 75 RSATPTYPKDASAMVTLLD--LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRA--------- 143 (258)
T ss_dssp CSSCCCCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH---------
T ss_pred cccccccchHHHHHHHHcC--CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH---------
Confidence 3445566666677777765 88999999999999999999999987778899999999999888887766
Q ss_pred hhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCccc-CCCCeEEEEcCCCCCCCCCCC
Q psy7837 124 NFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIA-LAENFEFVCADGRRGYPDAAP 202 (299)
Q Consensus 124 ~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~ 202 (299)
. +..+++++.+|+.....+.++
T Consensus 144 ---------------------------------------------------------~~g~~~v~~~~~d~~~~~~~~~~ 166 (258)
T 2pwy_A 144 ---------------------------------------------------------FWQVENVRFHLGKLEEAELEEAA 166 (258)
T ss_dssp ---------------------------------------------------------HCCCCCEEEEESCGGGCCCCTTC
T ss_pred ---------------------------------------------------------hcCCCCEEEEECchhhcCCCCCC
Confidence 3 346899999998876344468
Q ss_pred eeEEEecchhh-hHHHHHHHhccCCcEEEEEecCC
Q psy7837 203 YDVIYISQAIR-DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 203 fD~v~~~~~~~-~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
||+|+++..-. .+.+++.++|+|||++++..+..
T Consensus 167 ~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 167 YDGVALDLMEPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp EEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred cCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 99999976543 67789999999999999998765
No 25
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.56 E-value=1.3e-14 Score=124.36 Aligned_cols=95 Identities=19% Similarity=0.131 Sum_probs=82.1
Q ss_pred CCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQ 210 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 210 (299)
.+.+|||||||+|.++..+++.+.+|+++|+|+.|++.|++ ..++.++++|+.....+.++||+|++..
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~-----------~~~v~~~~~~~e~~~~~~~sfD~v~~~~ 107 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALR-----------HPRVTYAVAPAEDTGLPPASVDVAIAAQ 107 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCC-----------CTTEEEEECCTTCCCCCSSCEEEEEECS
T ss_pred CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhh-----------cCCceeehhhhhhhcccCCcccEEEEee
Confidence 45799999999999999999999999999999999987642 3589999999998777778999999999
Q ss_pred hhhh-----HHHHHHHhccCCcEEEEEecCC
Q psy7837 211 AIRD-----IPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 211 ~~~~-----~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
++++ ...++.++|||||+|++.....
T Consensus 108 ~~h~~~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 108 AMHWFDLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp CCTTCCHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ehhHhhHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 8865 3468999999999999876543
No 26
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.56 E-value=1.5e-14 Score=120.39 Aligned_cols=104 Identities=18% Similarity=0.217 Sum_probs=87.8
Q ss_pred hhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCe
Q psy7837 124 NFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPY 203 (299)
Q Consensus 124 ~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 203 (299)
.......++.+|||+|||+|.++..+++.+.+|+++|+++.+++.+++++.. ..+++++++|+.... ..++|
T Consensus 44 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~~d~~~~~-~~~~f 115 (216)
T 3ofk_A 44 RLSLSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKR-------WSHISWAATDILQFS-TAELF 115 (216)
T ss_dssp HHHTTTSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTT-------CSSEEEEECCTTTCC-CSCCE
T ss_pred HHHcccCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhccc-------CCCeEEEEcchhhCC-CCCCc
Confidence 3344556788999999999999999999998999999999999999998755 238999999998765 45789
Q ss_pred eEEEecchhhhH---------HHHHHHhccCCcEEEEEecC
Q psy7837 204 DVIYISQAIRDI---------PWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 204 D~v~~~~~~~~~---------~~~~~~~L~~gG~lv~~~~~ 235 (299)
|+|++..+++++ .+++.++|+|||.+++..+.
T Consensus 116 D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 116 DLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp EEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 999999877543 45788999999999997654
No 27
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.56 E-value=5.1e-14 Score=123.47 Aligned_cols=106 Identities=18% Similarity=0.031 Sum_probs=90.4
Q ss_pred hhhcccCCCCeEEEEcCCCcHHHHHHHHc-CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCC
Q psy7837 124 NFYGHLVYGSKVLDIGSGSGYLSALFAYM-GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAP 202 (299)
Q Consensus 124 ~~~~~~~~~~~vLDiG~G~G~~~~~la~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 202 (299)
.....+.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++... +...+++++.+|+... .++
T Consensus 65 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~---~~~ 137 (302)
T 3hem_A 65 LDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEV----DSPRRKEVRIQGWEEF---DEP 137 (302)
T ss_dssp HHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHS----CCSSCEEEEECCGGGC---CCC
T ss_pred HHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc----CCCCceEEEECCHHHc---CCC
Confidence 33445678999999999999999999988 899999999999999999998873 3445899999999775 478
Q ss_pred eeEEEecchhhhH---------------HHHHHHhccCCcEEEEEecCC
Q psy7837 203 YDVIYISQAIRDI---------------PWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 203 fD~v~~~~~~~~~---------------~~~~~~~L~~gG~lv~~~~~~ 236 (299)
||+|++..+++++ .+++.++|||||++++.....
T Consensus 138 fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 138 VDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp CSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred ccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 9999999888666 468999999999999987644
No 28
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.56 E-value=2.6e-14 Score=122.53 Aligned_cols=103 Identities=26% Similarity=0.222 Sum_probs=89.1
Q ss_pred hcccCCCCeEEEEcCCCcHHHHHHHHc-CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCee
Q psy7837 126 YGHLVYGSKVLDIGSGSGYLSALFAYM-GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYD 204 (299)
Q Consensus 126 ~~~~~~~~~vLDiG~G~G~~~~~la~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 204 (299)
...+.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++.. . .+++++++|+.....+.++||
T Consensus 50 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~--~~~~~~~~d~~~~~~~~~~fD 122 (266)
T 3ujc_A 50 DIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSG-----N--NKIIFEANDILTKEFPENNFD 122 (266)
T ss_dssp TCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCS-----C--TTEEEEECCTTTCCCCTTCEE
T ss_pred hcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhc-----C--CCeEEEECccccCCCCCCcEE
Confidence 345678899999999999999999987 89999999999999999988654 2 789999999987655568899
Q ss_pred EEEecchhhhH--------HHHHHHhccCCcEEEEEecC
Q psy7837 205 VIYISQAIRDI--------PWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 205 ~v~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~~ 235 (299)
+|++..+++++ .+++.++|+|||.+++....
T Consensus 123 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 123 LIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 99999888776 35899999999999998753
No 29
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.56 E-value=5.6e-14 Score=117.13 Aligned_cols=113 Identities=25% Similarity=0.327 Sum_probs=94.7
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCe
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSK 134 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 134 (299)
..+++.+. +.++.+|||+|||+|.++..+++..++..+++++|+++.+++.+++.+..
T Consensus 27 ~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~-------------------- 84 (219)
T 3dh0_A 27 EKVLKEFG--LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNK-------------------- 84 (219)
T ss_dssp HHHHHHHT--CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH--------------------
T ss_pred HHHHHHhC--CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHH--------------------
Confidence 56677765 78899999999999999999999887777899999999998888888766
Q ss_pred EEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecchhhh
Q psy7837 135 VLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQAIRD 214 (299)
Q Consensus 135 vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 214 (299)
....+++++.+|+.......++||+|++..++++
T Consensus 85 ----------------------------------------------~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 118 (219)
T 3dh0_A 85 ----------------------------------------------LGLKNVEVLKSEENKIPLPDNTVDFIFMAFTFHE 118 (219)
T ss_dssp ----------------------------------------------HTCTTEEEEECBTTBCSSCSSCEEEEEEESCGGG
T ss_pred ----------------------------------------------cCCCcEEEEecccccCCCCCCCeeEEEeehhhhh
Confidence 2445899999999876555678999999988764
Q ss_pred ------HHHHHHHhccCCcEEEEEecC
Q psy7837 215 ------IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 215 ------~~~~~~~~L~~gG~lv~~~~~ 235 (299)
+.+++.++|+|||.+++....
T Consensus 119 ~~~~~~~l~~~~~~LkpgG~l~i~~~~ 145 (219)
T 3dh0_A 119 LSEPLKFLEELKRVAKPFAYLAIIDWK 145 (219)
T ss_dssp CSSHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHhCCCeEEEEEEec
Confidence 446899999999999998654
No 30
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.55 E-value=4.1e-14 Score=122.61 Aligned_cols=129 Identities=22% Similarity=0.257 Sum_probs=106.9
Q ss_pred cccccccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHH
Q psy7837 40 HNIGHNAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETY 119 (299)
Q Consensus 40 ~~~~~~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~ 119 (299)
..+..+.....|.....+++.+. +.++.+|||+|||+|.++..+++.+++.++++++|+++.+++.+++++..
T Consensus 74 ~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~----- 146 (280)
T 1i9g_A 74 MSMPRGPQVIYPKDAAQIVHEGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSG----- 146 (280)
T ss_dssp TTSCSCSCCCCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH-----
T ss_pred hhccccceeecHHHHHHHHHHcC--CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-----
Confidence 34556666778888888888776 89999999999999999999999887778999999999999998888765
Q ss_pred HHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCccc-C--CCCeEEEEcCCCCC
Q psy7837 120 IKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIA-L--AENFEFVCADGRRG 196 (299)
Q Consensus 120 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~-~--~~~v~~~~~d~~~~ 196 (299)
. + ..+++++.+|+...
T Consensus 147 -------------------------------------------------------------~~g~~~~~v~~~~~d~~~~ 165 (280)
T 1i9g_A 147 -------------------------------------------------------------CYGQPPDNWRLVVSDLADS 165 (280)
T ss_dssp -------------------------------------------------------------HHTSCCTTEEEECSCGGGC
T ss_pred -------------------------------------------------------------hcCCCCCcEEEEECchHhc
Confidence 2 2 46899999998876
Q ss_pred CCCCCCeeEEEecchhh-hHHHHHHHhccCCcEEEEEecCC
Q psy7837 197 YPDAAPYDVIYISQAIR-DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 197 ~~~~~~fD~v~~~~~~~-~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
..+.++||+|+++..-. .+.+++.++|+|||++++.++..
T Consensus 166 ~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 166 ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred CCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 54457899999976543 57789999999999999998764
No 31
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.55 E-value=4.8e-14 Score=124.29 Aligned_cols=105 Identities=15% Similarity=0.140 Sum_probs=90.1
Q ss_pred cccCCCCeEEEEcCCCcHHHHHHHHc-CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeE
Q psy7837 127 GHLVYGSKVLDIGSGSGYLSALFAYM-GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDV 205 (299)
Q Consensus 127 ~~~~~~~~vLDiG~G~G~~~~~la~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 205 (299)
..+.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.++++++.+ +...+++++.+|+.......++||+
T Consensus 113 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~~~~~fD~ 188 (312)
T 3vc1_A 113 GQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRAREL----RIDDHVRSRVCNMLDTPFDKGAVTA 188 (312)
T ss_dssp CCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT----TCTTTEEEEECCTTSCCCCTTCEEE
T ss_pred ccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc----CCCCceEEEECChhcCCCCCCCEeE
Confidence 33778999999999999999999988 899999999999999999999873 3445899999999876555688999
Q ss_pred EEecchhhh-----HHHHHHHhccCCcEEEEEecC
Q psy7837 206 IYISQAIRD-----IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 206 v~~~~~~~~-----~~~~~~~~L~~gG~lv~~~~~ 235 (299)
|++..++++ +.+++.++|||||++++....
T Consensus 189 V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 223 (312)
T 3vc1_A 189 SWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGC 223 (312)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 999887654 456899999999999998754
No 32
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.55 E-value=4.4e-14 Score=115.29 Aligned_cols=103 Identities=17% Similarity=0.090 Sum_probs=85.1
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC--CCCCCeeEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY--PDAAPYDVI 206 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~v 206 (299)
.++.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++++.+ ...+++++++|+.... ...++||+|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEAL-----GLSGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHH-----TCSCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHc-----CCCceEEEEccHHHHHhhccCCCccEE
Confidence 4688999999999999998888765 6999999999999999999883 4478999999987532 224789999
Q ss_pred Eecchhhh-------HHHHHHH--hccCCcEEEEEecCCC
Q psy7837 207 YISQAIRD-------IPWHIVD--QLKLGGRMLFIKGHED 237 (299)
Q Consensus 207 ~~~~~~~~-------~~~~~~~--~L~~gG~lv~~~~~~~ 237 (299)
+++.++.+ +.+.+.+ +|+|||.+++......
T Consensus 118 ~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 118 LADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp EECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred EECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 99987654 3356777 9999999999886543
No 33
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.55 E-value=6.3e-14 Score=114.99 Aligned_cols=107 Identities=16% Similarity=0.249 Sum_probs=88.2
Q ss_pred cCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCc
Q psy7837 64 HLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSG 143 (299)
Q Consensus 64 ~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G 143 (299)
.++++.+|||+|||+|.++..+++.+++.++++++|+++.+++.+++++...
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~---------------------------- 70 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDL---------------------------- 70 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHT----------------------------
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc----------------------------
Confidence 4789999999999999999999999877778999999999999988888761
Q ss_pred HHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC-CCCCCeeEEEecchh----------
Q psy7837 144 YLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY-PDAAPYDVIYISQAI---------- 212 (299)
Q Consensus 144 ~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~~---------- 212 (299)
+...+++++++|+.... ...++||+|+++.++
T Consensus 71 -------------------------------------~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~ 113 (197)
T 3eey_A 71 -------------------------------------NLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGYLPSGDHSIST 113 (197)
T ss_dssp -------------------------------------TCGGGEEEECSCGGGGGGTCCSCEEEEEEEESBCTTSCTTCBC
T ss_pred -------------------------------------CCCCCeEEEECCHHHHhhhccCCceEEEEcCCcccCccccccc
Confidence 22368999999987542 233789999998754
Q ss_pred -----hhHHHHHHHhccCCcEEEEEecC
Q psy7837 213 -----RDIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 213 -----~~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
..+.+++.++|+|||++++....
T Consensus 114 ~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 114 RPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 24668899999999999998643
No 34
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.54 E-value=6.6e-14 Score=120.71 Aligned_cols=106 Identities=20% Similarity=0.271 Sum_probs=89.5
Q ss_pred hcccCCCCeEEEEcCCCcHHHHHHHHc-CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCee
Q psy7837 126 YGHLVYGSKVLDIGSGSGYLSALFAYM-GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYD 204 (299)
Q Consensus 126 ~~~~~~~~~vLDiG~G~G~~~~~la~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 204 (299)
...+.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.++++++.. +...++.++.+|+.....+.++||
T Consensus 56 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~fD 131 (273)
T 3bus_A 56 LLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAA----GLANRVTFSYADAMDLPFEDASFD 131 (273)
T ss_dssp HSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHT----TCTTTEEEEECCTTSCCSCTTCEE
T ss_pred hcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhc----CCCcceEEEECccccCCCCCCCcc
Confidence 345678899999999999999999875 889999999999999999998763 334589999999987655567899
Q ss_pred EEEecchhhhH------HHHHHHhccCCcEEEEEecC
Q psy7837 205 VIYISQAIRDI------PWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 205 ~v~~~~~~~~~------~~~~~~~L~~gG~lv~~~~~ 235 (299)
+|++..+++++ .+++.++|||||++++....
T Consensus 132 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 132 AVWALESLHHMPDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp EEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred EEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 99999887654 46899999999999998643
No 35
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.54 E-value=1e-13 Score=118.40 Aligned_cols=125 Identities=22% Similarity=0.314 Sum_probs=102.5
Q ss_pred cccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHH
Q psy7837 44 HNAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRI 123 (299)
Q Consensus 44 ~~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~ 123 (299)
.+.....|.....+++.+. +.++.+|||+|||+|.++..+++.+++.++++++|+++.+++.+++++...
T Consensus 72 ~~~~~~~~~~~~~i~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~-------- 141 (255)
T 3mb5_A 72 RGPQIVHPKDAALIVAYAG--ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWA-------- 141 (255)
T ss_dssp CCSCCCCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH--------
T ss_pred cccccccHhHHHHHHHhhC--CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHc--------
Confidence 4445556777777777765 889999999999999999999999887889999999999999998888762
Q ss_pred hhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCe
Q psy7837 124 NFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPY 203 (299)
Q Consensus 124 ~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 203 (299)
+...+++++.+|+..... .++|
T Consensus 142 ---------------------------------------------------------~~~~~v~~~~~d~~~~~~-~~~~ 163 (255)
T 3mb5_A 142 ---------------------------------------------------------GFDDRVTIKLKDIYEGIE-EENV 163 (255)
T ss_dssp ---------------------------------------------------------TCTTTEEEECSCGGGCCC-CCSE
T ss_pred ---------------------------------------------------------CCCCceEEEECchhhccC-CCCc
Confidence 233459999999987543 4679
Q ss_pred eEEEecchhh-hHHHHHHHhccCCcEEEEEecCC
Q psy7837 204 DVIYISQAIR-DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 204 D~v~~~~~~~-~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
|+|+++..-. .+.+++.++|+|||++++..+..
T Consensus 164 D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 164 DHVILDLPQPERVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp EEEEECSSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred CEEEECCCCHHHHHHHHHHHcCCCCEEEEEECCH
Confidence 9999987654 37789999999999999987654
No 36
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.54 E-value=4.3e-14 Score=122.13 Aligned_cols=112 Identities=21% Similarity=0.273 Sum_probs=94.3
Q ss_pred HHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC
Q psy7837 119 YIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG 196 (299)
Q Consensus 119 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 196 (299)
+...+.....+.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.+++++.. ....+++++.+|+...
T Consensus 25 l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~~~d~~~~ 99 (276)
T 3mgg_A 25 LEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEK-----NGIKNVKFLQANIFSL 99 (276)
T ss_dssp HHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH-----TTCCSEEEEECCGGGC
T ss_pred HHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH-----cCCCCcEEEEcccccC
Confidence 3344555556678999999999999999999988 67899999999999999999887 4556899999999876
Q ss_pred CCCCCCeeEEEecchhhh------HHHHHHHhccCCcEEEEEecC
Q psy7837 197 YPDAAPYDVIYISQAIRD------IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 197 ~~~~~~fD~v~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~ 235 (299)
....++||+|++..++++ +.+++.++|+|||.+++..+.
T Consensus 100 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 100 PFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 656688999999988754 446899999999999997643
No 37
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.54 E-value=9.4e-14 Score=121.34 Aligned_cols=104 Identities=20% Similarity=0.184 Sum_probs=89.8
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc-CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM-GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVI 206 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 206 (299)
.+.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.++++++.. +...+++++.+|+.....+.++||+|
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~fD~v 154 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQA----GLADNITVKYGSFLEIPCEDNSYDFI 154 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHH----TCTTTEEEEECCTTSCSSCTTCEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhc----CCCcceEEEEcCcccCCCCCCCEeEE
Confidence 5678899999999999999999887 889999999999999999988763 34468999999998765556789999
Q ss_pred Eecchhhh------HHHHHHHhccCCcEEEEEecC
Q psy7837 207 YISQAIRD------IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 207 ~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~ 235 (299)
++..++++ +.+++.++|||||++++..+.
T Consensus 155 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 155 WSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 99988755 457899999999999998653
No 38
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.54 E-value=5.7e-14 Score=115.94 Aligned_cols=102 Identities=21% Similarity=0.182 Sum_probs=83.1
Q ss_pred CCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCC--CCeEEEEcCCCCCCC--CCCC-ee
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALA--ENFEFVCADGRRGYP--DAAP-YD 204 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~--~~~~-fD 204 (299)
++.+|||+|||+|.++..++..+. +|+++|+|+.+++.++++++.+ .. .+++++.+|+..... ..++ ||
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~-----~~~~~~v~~~~~d~~~~~~~~~~~~~fD 127 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTL-----KCSSEQAEVINQSSLDFLKQPQNQPHFD 127 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT-----TCCTTTEEEECSCHHHHTTSCCSSCCEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHh-----CCCccceEEEECCHHHHHHhhccCCCCC
Confidence 578999999999999998877764 7999999999999999999873 44 689999999875332 2468 99
Q ss_pred EEEecchhh-----hHHHHH--HHhccCCcEEEEEecCCC
Q psy7837 205 VIYISQAIR-----DIPWHI--VDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 205 ~v~~~~~~~-----~~~~~~--~~~L~~gG~lv~~~~~~~ 237 (299)
+|+++.++. .+.+.+ .++|+|||.+++...+..
T Consensus 128 ~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 128 VVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp EEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred EEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 999998842 344555 557999999999887654
No 39
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.54 E-value=6e-14 Score=120.12 Aligned_cols=102 Identities=16% Similarity=0.124 Sum_probs=87.8
Q ss_pred cccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEE
Q psy7837 127 GHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVI 206 (299)
Q Consensus 127 ~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 206 (299)
..+.++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.+++++ . ....++.++.+|+.......++||+|
T Consensus 35 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~-----~~~~~~~~~~~d~~~~~~~~~~fD~v 108 (263)
T 2yqz_A 35 HPKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI-A-----GVDRKVQVVQADARAIPLPDESVHGV 108 (263)
T ss_dssp CCSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT-T-----TSCTTEEEEESCTTSCCSCTTCEEEE
T ss_pred cCCCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-h-----ccCCceEEEEcccccCCCCCCCeeEE
Confidence 35677899999999999999999999999999999999999999987 3 35678999999998755556789999
Q ss_pred EecchhhhH------HHHHHHhccCCcEEEEEec
Q psy7837 207 YISQAIRDI------PWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 207 ~~~~~~~~~------~~~~~~~L~~gG~lv~~~~ 234 (299)
++..+++++ .+++.++|+|||.+++...
T Consensus 109 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (263)
T 2yqz_A 109 IVVHLWHLVPDWPKVLAEAIRVLKPGGALLEGWD 142 (263)
T ss_dssp EEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECCchhhcCCHHHHHHHHHHHCCCCcEEEEEec
Confidence 999887654 4688999999999999844
No 40
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.53 E-value=7.2e-14 Score=117.71 Aligned_cols=103 Identities=18% Similarity=0.210 Sum_probs=87.4
Q ss_pred hcccCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCe
Q psy7837 126 YGHLVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPY 203 (299)
Q Consensus 126 ~~~~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 203 (299)
+....++.+|||+|||+|.++..+++. +.+++++|+++.+++.+++++.. ..+++++++|+...... ++|
T Consensus 39 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~~d~~~~~~~-~~f 110 (234)
T 3dtn_A 39 ASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG-------NLKVKYIEADYSKYDFE-EKY 110 (234)
T ss_dssp CCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS-------CTTEEEEESCTTTCCCC-SCE
T ss_pred hhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc-------CCCEEEEeCchhccCCC-CCc
Confidence 334667899999999999999999988 78999999999999999998765 22899999999876555 789
Q ss_pred eEEEecchhhh--------HHHHHHHhccCCcEEEEEecCC
Q psy7837 204 DVIYISQAIRD--------IPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 204 D~v~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
|+|++..++++ +.+++.++|+|||.+++.....
T Consensus 111 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 111 DMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred eEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 99999988754 3468899999999999987543
No 41
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.53 E-value=9e-14 Score=113.88 Aligned_cols=101 Identities=21% Similarity=0.146 Sum_probs=85.7
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
...++.+|||+|||+|.++..+++.+.+++++|+++.+++.+++++.. ....+++++.+|+..... .++||+|+
T Consensus 29 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~~~d~~~~~~-~~~~D~v~ 102 (199)
T 2xvm_A 29 KVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSI-----ENLDNLHTRVVDLNNLTF-DRQYDFIL 102 (199)
T ss_dssp TTSCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----HTCTTEEEEECCGGGCCC-CCCEEEEE
T ss_pred hccCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHh-----CCCCCcEEEEcchhhCCC-CCCceEEE
Confidence 345678999999999999999999999999999999999999999876 344579999999887554 57899999
Q ss_pred ecchhhhH--------HHHHHHhccCCcEEEEEec
Q psy7837 208 ISQAIRDI--------PWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 208 ~~~~~~~~--------~~~~~~~L~~gG~lv~~~~ 234 (299)
+..+++++ .+++.++|+|||.+++...
T Consensus 103 ~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 103 STVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp EESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 99877543 4688999999999887653
No 42
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.53 E-value=7.1e-14 Score=116.48 Aligned_cols=106 Identities=11% Similarity=0.104 Sum_probs=82.7
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcC--CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMG--AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVI 206 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 206 (299)
..++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.++++++.++-......+++++++|+.......++||+|
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 106 (217)
T 3jwh_A 27 QSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAA 106 (217)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEE
T ss_pred hcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEE
Confidence 3568899999999999999999985 58999999999999999998762100000128999999987544444789999
Q ss_pred EecchhhhH--------HHHHHHhccCCcEEEEEec
Q psy7837 207 YISQAIRDI--------PWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 207 ~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~ 234 (299)
++..+++++ .+++.++|||||.+++...
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 107 TVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred eeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 999887643 3578899999997766543
No 43
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.53 E-value=1.1e-13 Score=116.27 Aligned_cols=118 Identities=24% Similarity=0.311 Sum_probs=88.2
Q ss_pred CcchHHHHHHHHh-ccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcc
Q psy7837 50 SPSDHCLVLELLS-GHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGH 128 (299)
Q Consensus 50 ~p~~~~~~~~~l~-~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 128 (299)
...+.+.+++.+. -.+++|++|||+|||+|+++..+++.++++|+|+++|+++.+++...+....
T Consensus 58 ~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-------------- 123 (232)
T 3id6_C 58 RSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-------------- 123 (232)
T ss_dssp TCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH--------------
T ss_pred HHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh--------------
Confidence 3344555555553 2478999999999999999999999999999999999999987654433322
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC---CCCCCeeE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY---PDAAPYDV 205 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~ 205 (299)
..|+.++.+|+.... ...++||+
T Consensus 124 ------------------------------------------------------r~nv~~i~~Da~~~~~~~~~~~~~D~ 149 (232)
T 3id6_C 124 ------------------------------------------------------RPNIFPLLADARFPQSYKSVVENVDV 149 (232)
T ss_dssp ------------------------------------------------------CTTEEEEECCTTCGGGTTTTCCCEEE
T ss_pred ------------------------------------------------------cCCeEEEEcccccchhhhccccceEE
Confidence 248999999987532 11367999
Q ss_pred EEecchhhhHH----HHHHHhccCCcEEEEEecC
Q psy7837 206 IYISQAIRDIP----WHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 206 v~~~~~~~~~~----~~~~~~L~~gG~lv~~~~~ 235 (299)
|+++.+..... ..+.+.|||||+|++++..
T Consensus 150 I~~d~a~~~~~~il~~~~~~~LkpGG~lvisik~ 183 (232)
T 3id6_C 150 LYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVIKA 183 (232)
T ss_dssp EEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred EEecCCChhHHHHHHHHHHHhCCCCeEEEEEEcc
Confidence 99998765433 3455699999999998643
No 44
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.53 E-value=1.4e-13 Score=115.62 Aligned_cols=103 Identities=23% Similarity=0.314 Sum_probs=85.9
Q ss_pred ccCCCCeEEEEcCC-CcHHHHHHHHc-CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC-CCCCCCee
Q psy7837 128 HLVYGSKVLDIGSG-SGYLSALFAYM-GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG-YPDAAPYD 204 (299)
Q Consensus 128 ~~~~~~~vLDiG~G-~G~~~~~la~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD 204 (299)
.+.++.+|||+||| +|.++..+++. +.+|+++|+++.+++.++++++.+ .. +++++++|+... ....++||
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~-~v~~~~~d~~~~~~~~~~~fD 125 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERN-----NS-NVRLVKSNGGIIKGVVEGTFD 125 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHT-----TC-CCEEEECSSCSSTTTCCSCEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHh-----CC-CcEEEeCCchhhhhcccCcee
Confidence 35678999999999 99999999998 899999999999999999999883 33 899999997422 12237899
Q ss_pred EEEecchh-------------------------hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 205 VIYISQAI-------------------------RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 205 ~v~~~~~~-------------------------~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+|+++.++ ..+.+++.++|+|||++++..+..
T Consensus 126 ~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 182 (230)
T 3evz_A 126 VIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK 182 (230)
T ss_dssp EEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC
T ss_pred EEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc
Confidence 99998764 345678899999999999987653
No 45
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.53 E-value=4.9e-14 Score=119.43 Aligned_cols=100 Identities=16% Similarity=0.259 Sum_probs=85.8
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
...++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.++++.. . +++++++|+... ...++||+|+
T Consensus 39 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~--------~-~v~~~~~d~~~~-~~~~~fD~v~ 108 (250)
T 2p7i_A 39 PFFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLK--------D-GITYIHSRFEDA-QLPRRYDNIV 108 (250)
T ss_dssp GGCCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSC--------S-CEEEEESCGGGC-CCSSCEEEEE
T ss_pred hhcCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhh--------C-CeEEEEccHHHc-CcCCcccEEE
Confidence 34578899999999999999999999999999999999999998742 2 899999998876 3457899999
Q ss_pred ecchhhhH------HHHHH-HhccCCcEEEEEecCCC
Q psy7837 208 ISQAIRDI------PWHIV-DQLKLGGRMLFIKGHED 237 (299)
Q Consensus 208 ~~~~~~~~------~~~~~-~~L~~gG~lv~~~~~~~ 237 (299)
+..+++++ .+++. ++|||||.+++..++..
T Consensus 109 ~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 109 LTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp EESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTT
T ss_pred EhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChH
Confidence 99988654 46889 99999999999987654
No 46
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.53 E-value=5.8e-14 Score=116.61 Aligned_cols=103 Identities=26% Similarity=0.292 Sum_probs=86.9
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc-CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM-GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVI 206 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 206 (299)
...++ +|||+|||+|.++..+++. +.+++++|+++.+++.++++++.. ....+++++++|+.......++||+|
T Consensus 41 ~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~D~v 115 (219)
T 3dlc_A 41 GITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADA----NLNDRIQIVQGDVHNIPIEDNYADLI 115 (219)
T ss_dssp CCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHT----TCTTTEEEEECBTTBCSSCTTCEEEE
T ss_pred CCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhc----cccCceEEEEcCHHHCCCCcccccEE
Confidence 33444 9999999999999999987 778999999999999999998873 33458999999998765556889999
Q ss_pred Eecchhhh------HHHHHHHhccCCcEEEEEecC
Q psy7837 207 YISQAIRD------IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 207 ~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~ 235 (299)
++..++++ +.+++.++|+|||.+++....
T Consensus 116 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 116 VSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EECchHhhccCHHHHHHHHHHhCCCCCEEEEEecc
Confidence 99988764 456899999999999998644
No 47
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.53 E-value=7.4e-14 Score=119.12 Aligned_cols=101 Identities=23% Similarity=0.233 Sum_probs=86.6
Q ss_pred cccCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeE
Q psy7837 127 GHLVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDV 205 (299)
Q Consensus 127 ~~~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 205 (299)
....++.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++. ..++.++.+|+.......++||+
T Consensus 40 ~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~~~~~~~fD~ 111 (253)
T 3g5l_A 40 LPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--------SPVVCYEQKAIEDIAIEPDAYNV 111 (253)
T ss_dssp CCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC--------CTTEEEEECCGGGCCCCTTCEEE
T ss_pred hhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc--------cCCeEEEEcchhhCCCCCCCeEE
Confidence 3445789999999999999999999987 89999999999999998843 46899999999876555688999
Q ss_pred EEecchhhh------HHHHHHHhccCCcEEEEEecC
Q psy7837 206 IYISQAIRD------IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 206 v~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~ 235 (299)
|++..++++ +.+++.++|+|||.+++.+.+
T Consensus 112 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 112 VLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 999998764 346899999999999998654
No 48
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.52 E-value=2.5e-13 Score=110.50 Aligned_cols=104 Identities=20% Similarity=0.199 Sum_probs=88.1
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCC--eEEEEcCCCCCCCCCCCeeE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAEN--FEFVCADGRRGYPDAAPYDV 205 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~--v~~~~~d~~~~~~~~~~fD~ 205 (299)
...++.+|||+|||+|.++..+++.+.+++++|+++.+++.+++++.. ....+ ++++.+|+..... .++||+
T Consensus 49 ~~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~d~~~~~~-~~~~D~ 122 (194)
T 1dus_A 49 VVDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKL-----NNLDNYDIRVVHSDLYENVK-DRKYNK 122 (194)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHH-----TTCTTSCEEEEECSTTTTCT-TSCEEE
T ss_pred ccCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHH-----cCCCccceEEEECchhcccc-cCCceE
Confidence 345788999999999999999998888999999999999999999887 34455 9999999887443 468999
Q ss_pred EEecchhh-------hHHHHHHHhccCCcEEEEEecCCC
Q psy7837 206 IYISQAIR-------DIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 206 v~~~~~~~-------~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
|+++.+++ .+.+++.++|+|||.+++..+...
T Consensus 123 v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 161 (194)
T 1dus_A 123 IITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQ 161 (194)
T ss_dssp EEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTH
T ss_pred EEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 99988754 344688999999999999988753
No 49
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.52 E-value=1.5e-13 Score=114.39 Aligned_cols=101 Identities=16% Similarity=0.184 Sum_probs=85.8
Q ss_pred CCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC--CCCCCeeEE
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY--PDAAPYDVI 206 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~v 206 (299)
++.+|||+|||+|.++..+++. +.+++++|+++.+++.+++++.. ....++.++.+|+.... ...++||+|
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~~~~D~i 115 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLE-----VGVPNIKLLWVDGSDLTDYFEDGEIDRL 115 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH-----HCCSSEEEEECCSSCGGGTSCTTCCSEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHH-----cCCCCEEEEeCCHHHHHhhcCCCCCCEE
Confidence 4789999999999999999887 57899999999999999999987 34579999999998633 344789999
Q ss_pred Eecchhh--------------hHHHHHHHhccCCcEEEEEecCC
Q psy7837 207 YISQAIR--------------DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 207 ~~~~~~~--------------~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+++.+.. .+.+++.++|+|||.+++.+...
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (214)
T 1yzh_A 116 YLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR 159 (214)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH
T ss_pred EEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH
Confidence 9987652 47788999999999999987543
No 50
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.52 E-value=1.3e-13 Score=114.95 Aligned_cols=97 Identities=22% Similarity=0.251 Sum_probs=84.6
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEec
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYIS 209 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 209 (299)
.++.+|||+|||+|.++..+++.+.+++++|+++.+++.+++++. .+++++.+|+...... ++||+|++.
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~d~~~~~~~-~~fD~v~~~ 113 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP---------KEFSITEGDFLSFEVP-TSIDTIVST 113 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC---------TTCCEESCCSSSCCCC-SCCSEEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC---------CceEEEeCChhhcCCC-CCeEEEEEC
Confidence 468899999999999999999999999999999999999998742 4788999999876555 889999999
Q ss_pred chhhh--------HHHHHHHhccCCcEEEEEecCC
Q psy7837 210 QAIRD--------IPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 210 ~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
.++++ +.+++.++|||||.+++..+..
T Consensus 114 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 114 YAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred cchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 98864 4568899999999999997543
No 51
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.52 E-value=1.4e-13 Score=114.43 Aligned_cols=103 Identities=17% Similarity=0.238 Sum_probs=87.4
Q ss_pred hhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCe
Q psy7837 124 NFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPY 203 (299)
Q Consensus 124 ~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 203 (299)
..+....++.+|||+|||+|.++..+++.+.+|+++|+++.+++.+++. ...+++++.+|+... ...++|
T Consensus 39 ~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~---------~~~~~~~~~~d~~~~-~~~~~~ 108 (218)
T 3ou2_A 39 ERLRAGNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGRH---------GLDNVEFRQQDLFDW-TPDRQW 108 (218)
T ss_dssp HHHTTTTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGGG---------CCTTEEEEECCTTSC-CCSSCE
T ss_pred HHHhcCCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHhc---------CCCCeEEEecccccC-CCCCce
Confidence 3444567788999999999999999999999999999999999999872 346899999999876 455889
Q ss_pred eEEEecchhhhH--------HHHHHHhccCCcEEEEEecCC
Q psy7837 204 DVIYISQAIRDI--------PWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 204 D~v~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~~~ 236 (299)
|+|++..+++++ .+++.++|+|||.+++.....
T Consensus 109 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 109 DAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred eEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 999999887543 457889999999999998765
No 52
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.52 E-value=1e-13 Score=114.57 Aligned_cols=106 Identities=22% Similarity=0.175 Sum_probs=86.3
Q ss_pred hhcccCCCCeEEEEcCCCcHHH-HHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCe
Q psy7837 125 FYGHLVYGSKVLDIGSGSGYLS-ALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPY 203 (299)
Q Consensus 125 ~~~~~~~~~~vLDiG~G~G~~~-~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 203 (299)
.+....++.+|||+|||+|..+ ..++..+.+|+++|+|+.+++.++++++.. ..++.++++|+.....+.++|
T Consensus 17 ~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~d~~~~~~~~~~f 90 (209)
T 2p8j_A 17 YCNESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSREN------NFKLNISKGDIRKLPFKDESM 90 (209)
T ss_dssp HHHHSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHH------TCCCCEEECCTTSCCSCTTCE
T ss_pred HHhccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc------CCceEEEECchhhCCCCCCce
Confidence 3445567899999999999984 455677889999999999999999998762 257889999998755555789
Q ss_pred eEEEecchhhhH--------HHHHHHhccCCcEEEEEecCC
Q psy7837 204 DVIYISQAIRDI--------PWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 204 D~v~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~~~ 236 (299)
|+|++..+++++ .+++.++|+|||.+++.....
T Consensus 91 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 91 SFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred eEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 999998876654 257899999999999987654
No 53
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.52 E-value=1.5e-13 Score=114.25 Aligned_cols=101 Identities=21% Similarity=0.267 Sum_probs=79.4
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCcH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSGY 144 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~ 144 (299)
+++|++|||+|||+|.++..+++.++ .++|+++|+++.+++...+....
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~------------------------------ 103 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRE------------------------------ 103 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHH------------------------------
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhc------------------------------
Confidence 67899999999999999999999887 68999999999987665554333
Q ss_pred HHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC---CCCCCCeeEEEecchhhh----HHH
Q psy7837 145 LSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG---YPDAAPYDVIYISQAIRD----IPW 217 (299)
Q Consensus 145 ~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~fD~v~~~~~~~~----~~~ 217 (299)
..++.++.+|+... .+..++||+|+++...+. +.+
T Consensus 104 --------------------------------------~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~l~ 145 (210)
T 1nt2_A 104 --------------------------------------RNNIIPLLFDASKPWKYSGIVEKVDLIYQDIAQKNQIEILKA 145 (210)
T ss_dssp --------------------------------------CSSEEEECSCTTCGGGTTTTCCCEEEEEECCCSTTHHHHHHH
T ss_pred --------------------------------------CCCeEEEEcCCCCchhhcccccceeEEEEeccChhHHHHHHH
Confidence 13788888888753 122378999999854332 357
Q ss_pred HHHHhccCCcEEEEEec
Q psy7837 218 HIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 218 ~~~~~L~~gG~lv~~~~ 234 (299)
++.++|||||++++...
T Consensus 146 ~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 146 NAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp HHHHHEEEEEEEEEEEE
T ss_pred HHHHHhCCCCEEEEEEe
Confidence 89999999999999863
No 54
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.51 E-value=1.1e-13 Score=115.40 Aligned_cols=101 Identities=15% Similarity=0.203 Sum_probs=82.0
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcC--CeEEEEeCChHHHHHHHHHHHhcCCcccCC----CCeEEEEcCCCCCCCCCCCe
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMG--AKVYAIEHVKNLCKRAMKNIRRGAPAIALA----ENFEFVCADGRRGYPDAAPY 203 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~f 203 (299)
.++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.+++++..+ ... .+++++.+|+.......++|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~~~~~~~v~~~~~d~~~~~~~~~~f 103 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKID----RLPEMQRKRISLFQSSLVYRDKRFSGY 103 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGG----GSCHHHHTTEEEEECCSSSCCGGGTTC
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhh----ccccccCcceEEEeCcccccccccCCC
Confidence 568899999999999999999886 68999999999999999998662 122 28999999987654445789
Q ss_pred eEEEecchhhhHH--------HHHHHhccCCcEEEEEec
Q psy7837 204 DVIYISQAIRDIP--------WHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 204 D~v~~~~~~~~~~--------~~~~~~L~~gG~lv~~~~ 234 (299)
|+|++..+++++. +++.++|||||.++....
T Consensus 104 D~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 104 DAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp SEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred CEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 9999998876543 468899999996655443
No 55
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.51 E-value=2.5e-13 Score=118.04 Aligned_cols=104 Identities=18% Similarity=0.072 Sum_probs=87.1
Q ss_pred hcccCCCCeEEEEcCCCcHHHHHHH-HcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCee
Q psy7837 126 YGHLVYGSKVLDIGSGSGYLSALFA-YMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYD 204 (299)
Q Consensus 126 ~~~~~~~~~vLDiG~G~G~~~~~la-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 204 (299)
...+.++.+|||+|||+|.++..++ ..+.+|+++|+|+.+++.+++++... +...+++++.+|+.... ++||
T Consensus 59 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~----~~~~~~~~~~~d~~~~~---~~fD 131 (287)
T 1kpg_A 59 KLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANS----ENLRSKRVLLAGWEQFD---EPVD 131 (287)
T ss_dssp TTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTC----CCCSCEEEEESCGGGCC---CCCS
T ss_pred HcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc----CCCCCeEEEECChhhCC---CCee
Confidence 3456788999999999999999998 55889999999999999999998763 33468999999987543 6799
Q ss_pred EEEecchhhhH--------HHHHHHhccCCcEEEEEecCC
Q psy7837 205 VIYISQAIRDI--------PWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 205 ~v~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+|++..+++++ .+++.++|||||.+++.....
T Consensus 132 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 132 RIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp EEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred EEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 99999887655 358899999999999987543
No 56
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.51 E-value=1.8e-13 Score=118.89 Aligned_cols=98 Identities=21% Similarity=0.241 Sum_probs=85.0
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEec
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYIS 209 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 209 (299)
.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.+++++..+ .. +++++.+|+..... .++||+|+++
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~-----~~-~~~~~~~d~~~~~~-~~~fD~i~~~ 191 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKE-----NL-NISTALYDINAANI-QENYDFIVST 191 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TC-CEEEEECCGGGCCC-CSCEEEEEEC
T ss_pred cCCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHc-----CC-ceEEEEeccccccc-cCCccEEEEc
Confidence 36899999999999999999999999999999999999999998873 33 89999999987554 5789999999
Q ss_pred chhhh--------HHHHHHHhccCCcEEEEEec
Q psy7837 210 QAIRD--------IPWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 210 ~~~~~--------~~~~~~~~L~~gG~lv~~~~ 234 (299)
.++++ +.+++.++|+|||.+++...
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 192 VVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp SSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 87753 44688999999999887654
No 57
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.51 E-value=1.1e-13 Score=118.67 Aligned_cols=106 Identities=21% Similarity=0.269 Sum_probs=87.6
Q ss_pred ccC-CCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC--CCCCCe
Q psy7837 128 HLV-YGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY--PDAAPY 203 (299)
Q Consensus 128 ~~~-~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~f 203 (299)
... ++.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++++.+ ....+++++++|+.... ...++|
T Consensus 45 ~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~----~~~~~v~~~~~D~~~~~~~~~~~~f 120 (259)
T 3lpm_A 45 YLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYN----QLEDQIEIIEYDLKKITDLIPKERA 120 (259)
T ss_dssp CCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHT----TCTTTEEEECSCGGGGGGTSCTTCE
T ss_pred cCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHC----CCcccEEEEECcHHHhhhhhccCCc
Confidence 445 789999999999999999998865 8999999999999999999874 34457999999998643 234789
Q ss_pred eEEEecchhh--------------------------hHHHHHHHhccCCcEEEEEecCCC
Q psy7837 204 DVIYISQAIR--------------------------DIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 204 D~v~~~~~~~--------------------------~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
|+|++++++. .+.+.+.++|+|||++++..+...
T Consensus 121 D~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 180 (259)
T 3lpm_A 121 DIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPER 180 (259)
T ss_dssp EEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTT
T ss_pred cEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHH
Confidence 9999986642 345688999999999999876554
No 58
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.51 E-value=1.5e-13 Score=116.25 Aligned_cols=101 Identities=16% Similarity=0.167 Sum_probs=87.3
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEe
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYI 208 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 208 (299)
+.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++. ...+++++.+|+.......++||+|++
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~~~d~~~~~~~~~~fD~v~~ 122 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERG--------EGPDLSFIKGDLSSLPFENEQFEAIMA 122 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTT--------CBTTEEEEECBTTBCSSCTTCEEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhc--------ccCCceEEEcchhcCCCCCCCccEEEE
Confidence 357889999999999999999999999999999999999998873 346899999999876555688999999
Q ss_pred cchhhh------HHHHHHHhccCCcEEEEEecCCC
Q psy7837 209 SQAIRD------IPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 209 ~~~~~~------~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
..++++ +.+++.++|+|||.+++......
T Consensus 123 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 157 (242)
T 3l8d_A 123 INSLEWTEEPLRALNEIKRVLKSDGYACIAILGPT 157 (242)
T ss_dssp ESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred cChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCc
Confidence 988764 45689999999999999886544
No 59
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.50 E-value=2.1e-13 Score=123.20 Aligned_cols=102 Identities=23% Similarity=0.301 Sum_probs=88.2
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEec
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYIS 209 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 209 (299)
.++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.++++++.+ . .+++++.+|+.......++||+|+++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~-----~-~~v~~~~~D~~~~~~~~~~fD~Ii~n 305 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEAN-----A-LKAQALHSDVDEALTEEARFDIIVTN 305 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHT-----T-CCCEEEECSTTTTSCTTCCEEEEEEC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHc-----C-CCeEEEEcchhhccccCCCeEEEEEC
Confidence 46889999999999999999999999999999999999999999873 2 24899999998766555789999999
Q ss_pred chhhh-----------HHHHHHHhccCCcEEEEEecCCC
Q psy7837 210 QAIRD-----------IPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 210 ~~~~~-----------~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
.++++ +.+++.++|+|||.++++.....
T Consensus 306 pp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l 344 (381)
T 3dmg_A 306 PPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFL 344 (381)
T ss_dssp CCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTS
T ss_pred CchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCC
Confidence 77653 45688999999999999987653
No 60
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.50 E-value=3.6e-13 Score=112.66 Aligned_cols=100 Identities=20% Similarity=0.305 Sum_probs=85.6
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEec
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYIS 209 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 209 (299)
.++.+|||+|||+|.++..+++.+.+++++|+++.+++.++++++.+ . .+++++.+|+.......++||+|+++
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~-~~~~~~~~d~~~~~~~~~~~D~v~~~ 110 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSR-----E-SNVEFIVGDARKLSFEDKTFDYVIFI 110 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----T-CCCEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-----C-CCceEEECchhcCCCCCCcEEEEEEc
Confidence 45889999999999999999999889999999999999999998762 2 68999999988754445789999998
Q ss_pred ch--hhh------HHHHHHHhccCCcEEEEEecC
Q psy7837 210 QA--IRD------IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 210 ~~--~~~------~~~~~~~~L~~gG~lv~~~~~ 235 (299)
.+ +.+ +.+++.++|+|||.+++..+.
T Consensus 111 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 111 DSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 88 433 346889999999999998765
No 61
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.50 E-value=1e-13 Score=120.37 Aligned_cols=101 Identities=19% Similarity=0.267 Sum_probs=86.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC-CCCCCeeEEEec
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY-PDAAPYDVIYIS 209 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~ 209 (299)
++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++++.. +...+++++++|+.... ...++||+|++.
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 143 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAK----GVSDNMQFIHCAAQDVASHLETPVDLILFH 143 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-----CCGGGEEEEESCGGGTGGGCSSCEEEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----CCCcceEEEEcCHHHhhhhcCCCceEEEEC
Confidence 3679999999999999999999999999999999999999998773 23368999999998754 345789999999
Q ss_pred chhhh------HHHHHHHhccCCcEEEEEecC
Q psy7837 210 QAIRD------IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 210 ~~~~~------~~~~~~~~L~~gG~lv~~~~~ 235 (299)
.++++ +.+++.++|+|||.+++...+
T Consensus 144 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 144 AVLEWVADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp SCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred chhhcccCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 98864 446899999999999998754
No 62
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.50 E-value=1e-13 Score=121.08 Aligned_cols=106 Identities=22% Similarity=0.285 Sum_probs=82.9
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCc----------------------------
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPA---------------------------- 179 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~---------------------------- 179 (299)
.++.+|||||||+|.++..+++. +.+|+++|+++.+++.|+++++.....
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 46899999999999999999987 678999999999999999987652100
Q ss_pred -------------------------ccCCCCeEEEEcCCCCCC-----CCCCCeeEEEecchhhhH------------HH
Q psy7837 180 -------------------------IALAENFEFVCADGRRGY-----PDAAPYDVIYISQAIRDI------------PW 217 (299)
Q Consensus 180 -------------------------~~~~~~v~~~~~d~~~~~-----~~~~~fD~v~~~~~~~~~------------~~ 217 (299)
.....+++|+++|+.... ...++||+|++..++.++ .+
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 001158999999987543 245789999999987554 35
Q ss_pred HHHHhccCCcEEEEEecC
Q psy7837 218 HIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 218 ~~~~~L~~gG~lv~~~~~ 235 (299)
++.++|+|||+|++...+
T Consensus 205 ~~~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQP 222 (292)
T ss_dssp HHHHHEEEEEEEEEECCC
T ss_pred HHHHHhCCCcEEEEecCC
Confidence 889999999999997654
No 63
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.50 E-value=3.3e-14 Score=123.91 Aligned_cols=105 Identities=16% Similarity=0.194 Sum_probs=83.8
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC---CCCCCeeEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY---PDAAPYDVI 206 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~v 206 (299)
.++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.++++....... ....++.+..+|+.... ...++||+|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKE-PAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTS-HHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccc-cccceeeEeecChhhCccccccCCCeEEE
Confidence 46789999999999999999999999999999999999999887431100 12347888999987643 445789999
Q ss_pred Eec-chhhh-------------HHHHHHHhccCCcEEEEEecC
Q psy7837 207 YIS-QAIRD-------------IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 207 ~~~-~~~~~-------------~~~~~~~~L~~gG~lv~~~~~ 235 (299)
++. .++++ +.+++.++|||||++++..++
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 997 55533 446899999999999998754
No 64
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.50 E-value=1.9e-13 Score=112.46 Aligned_cols=102 Identities=17% Similarity=0.131 Sum_probs=84.5
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEe
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYI 208 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 208 (299)
+.++ +|||+|||+|.++..+++.+.+|+++|+++.+++.+++++... .. ++.++.+|+.......++||+|++
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~-~~~~~~~d~~~~~~~~~~fD~v~~ 100 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEK-----GV-KITTVQSNLADFDIVADAWEGIVS 100 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHH-----TC-CEEEECCBTTTBSCCTTTCSEEEE
T ss_pred CCCC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhc-----CC-ceEEEEcChhhcCCCcCCccEEEE
Confidence 3456 9999999999999999999999999999999999999998762 22 899999998875545578999998
Q ss_pred cchh------hhHHHHHHHhccCCcEEEEEecCCC
Q psy7837 209 SQAI------RDIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 209 ~~~~------~~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
.... ..+.+++.++|+|||.+++......
T Consensus 101 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 101 IFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp ECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred EhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 6432 2345688999999999999986554
No 65
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.50 E-value=2.2e-13 Score=112.49 Aligned_cols=102 Identities=19% Similarity=0.155 Sum_probs=82.5
Q ss_pred CCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC-CCCCCCeeEEEe
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG-YPDAAPYDVIYI 208 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~v~~ 208 (299)
++.+|||+|||+|.+++.+++.+. +|+++|+++.+++.++++++.+ ...+++++++|+... ....++||+|++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~-----~~~~v~~~~~D~~~~~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATL-----KAGNARVVNSNAMSFLAQKGTPHNIVFV 128 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT-----TCCSEEEECSCHHHHHSSCCCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHc-----CCCcEEEEECCHHHHHhhcCCCCCEEEE
Confidence 578999999999999999887774 8999999999999999999873 447899999998752 223468999999
Q ss_pred cchhh-----hHHHHHHH--hccCCcEEEEEecCCC
Q psy7837 209 SQAIR-----DIPWHIVD--QLKLGGRMLFIKGHED 237 (299)
Q Consensus 209 ~~~~~-----~~~~~~~~--~L~~gG~lv~~~~~~~ 237 (299)
+.+++ .+.+.+.+ +|+|||++++.+....
T Consensus 129 ~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 129 DPPFRRGLLEETINLLEDNGWLADEALIYVESEVEN 164 (202)
T ss_dssp CCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEEGGG
T ss_pred CCCCCCCcHHHHHHHHHhcCccCCCcEEEEEECCCc
Confidence 98743 34455644 5999999999886543
No 66
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.50 E-value=1.3e-13 Score=119.40 Aligned_cols=122 Identities=25% Similarity=0.396 Sum_probs=98.9
Q ss_pred ccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhh
Q psy7837 47 FMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFY 126 (299)
Q Consensus 47 ~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~ 126 (299)
....|.....+++.+. +.++.+|||+|||+|.++..+++.+++.++++++|+++.+++.+++++...
T Consensus 94 ~~~~~~~~~~i~~~~~--~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------- 160 (277)
T 1o54_A 94 QIVYPKDSSFIAMMLD--VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW----------- 160 (277)
T ss_dssp CCCCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHT-----------
T ss_pred CccCHHHHHHHHHHhC--CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc-----------
Confidence 3455666666676665 889999999999999999999998877788999999999999888887661
Q ss_pred cccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEE
Q psy7837 127 GHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVI 206 (299)
Q Consensus 127 ~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 206 (299)
....+++++.+|+.... ..++||+|
T Consensus 161 ------------------------------------------------------~~~~~v~~~~~d~~~~~-~~~~~D~V 185 (277)
T 1o54_A 161 ------------------------------------------------------GLIERVTIKVRDISEGF-DEKDVDAL 185 (277)
T ss_dssp ------------------------------------------------------TCGGGEEEECCCGGGCC-SCCSEEEE
T ss_pred ------------------------------------------------------CCCCCEEEEECCHHHcc-cCCccCEE
Confidence 22257999999988763 33679999
Q ss_pred Eecchhh-hHHHHHHHhccCCcEEEEEecCC
Q psy7837 207 YISQAIR-DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 207 ~~~~~~~-~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+++..-. .+.+++.++|+|||.+++..+..
T Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 216 (277)
T 1o54_A 186 FLDVPDPWNYIDKCWEALKGGGRFATVCPTT 216 (277)
T ss_dssp EECCSCGGGTHHHHHHHEEEEEEEEEEESSH
T ss_pred EECCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 9987654 67789999999999999998754
No 67
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.49 E-value=1.8e-13 Score=115.73 Aligned_cols=101 Identities=22% Similarity=0.290 Sum_probs=85.9
Q ss_pred cccCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeE
Q psy7837 127 GHLVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDV 205 (299)
Q Consensus 127 ~~~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 205 (299)
....++.+|||+|||+|.++..+++.+. +++++|+++.+++.++++... .++.++.+|+.......++||+
T Consensus 39 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~~~~~~~fD~ 110 (243)
T 3bkw_A 39 LPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD--------TGITYERADLDKLHLPQDSFDL 110 (243)
T ss_dssp SCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS--------SSEEEEECCGGGCCCCTTCEEE
T ss_pred ccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc--------CCceEEEcChhhccCCCCCceE
Confidence 3445789999999999999999999988 899999999999999987532 4799999999875555578999
Q ss_pred EEecchhhh------HHHHHHHhccCCcEEEEEecC
Q psy7837 206 IYISQAIRD------IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 206 v~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~ 235 (299)
|++..++++ +.+++.++|+|||.+++..++
T Consensus 111 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 111 AYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 999988754 346899999999999998754
No 68
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.49 E-value=3.2e-13 Score=113.45 Aligned_cols=108 Identities=20% Similarity=0.219 Sum_probs=88.0
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEe
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYI 208 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 208 (299)
+.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.+++++...+-......++.++.+|+.......++||+|++
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 45789999999999999999999999999999999999999998876311101124789999999876555688999999
Q ss_pred cchhhh---------HHHHHHHhccCCcEEEEEecCC
Q psy7837 209 SQAIRD---------IPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 209 ~~~~~~---------~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
..++++ +.+++.++|+|||.+++.....
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 887653 4468899999999999986543
No 69
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.49 E-value=1.6e-13 Score=114.32 Aligned_cols=101 Identities=15% Similarity=0.222 Sum_probs=84.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC--CCCCCeeEE
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY--PDAAPYDVI 206 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~v 206 (299)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++++. ....++.++.+|+.... ...++||.|
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~-----~~~~nv~~~~~d~~~l~~~~~~~~~d~v 112 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKD-----SEAQNVKLLNIDADTLTDVFEPGEVKRV 112 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH-----SCCSSEEEECCCGGGHHHHCCTTSCCEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHH-----cCCCCEEEEeCCHHHHHhhcCcCCcCEE
Confidence 5789999999999999999987 67899999999999999999987 45578999999987632 334679999
Q ss_pred Eecchh--------------hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 207 YISQAI--------------RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 207 ~~~~~~--------------~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+++.+. ..+.+++.++|+|||.+++.+...
T Consensus 113 ~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~ 156 (213)
T 2fca_A 113 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR 156 (213)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH
T ss_pred EEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 886532 346788999999999999987553
No 70
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.49 E-value=2.1e-13 Score=116.63 Aligned_cols=103 Identities=16% Similarity=0.137 Sum_probs=78.7
Q ss_pred hcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCC--CCCCCCCe
Q psy7837 126 YGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRR--GYPDAAPY 203 (299)
Q Consensus 126 ~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~f 203 (299)
...+.++.+|||+|||+|.++..+++.+.+|+++|+|+.|++.+++++.. . .+.....+... .....++|
T Consensus 40 ~l~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~-----~---~v~~~~~~~~~~~~~~~~~~f 111 (261)
T 3iv6_A 40 LENIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALAD-----R---CVTIDLLDITAEIPKELAGHF 111 (261)
T ss_dssp TTTCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSS-----S---CCEEEECCTTSCCCGGGTTCC
T ss_pred hcCCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHh-----c---cceeeeeecccccccccCCCc
Confidence 44567889999999999999999999999999999999999999998755 1 22222222222 11113689
Q ss_pred eEEEecchhhhH--------HHHHHHhccCCcEEEEEecCCC
Q psy7837 204 DVIYISQAIRDI--------PWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 204 D~v~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
|+|+++.+++++ ..++.++| |||++++++....
T Consensus 112 D~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~ 152 (261)
T 3iv6_A 112 DFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLGF 152 (261)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBSC
T ss_pred cEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccCc
Confidence 999999887643 35778899 9999999987643
No 71
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.49 E-value=1.2e-13 Score=114.48 Aligned_cols=98 Identities=20% Similarity=0.254 Sum_probs=83.6
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
.+.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.+++++ ++.++.+|+.... ..++||+|+
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~d~~~~~-~~~~fD~v~ 107 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL-----------GRPVRTMLFHQLD-AIDAYDAVW 107 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----------TSCCEECCGGGCC-CCSCEEEEE
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc-----------CCceEEeeeccCC-CCCcEEEEE
Confidence 4567899999999999999999999999999999999999999874 4567788887655 558899999
Q ss_pred ecchhhhH--------HHHHHHhccCCcEEEEEecCCC
Q psy7837 208 ISQAIRDI--------PWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 208 ~~~~~~~~--------~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
+..+++++ .+++.++|+|||.+++......
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 145 (211)
T 3e23_A 108 AHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGE 145 (211)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCS
T ss_pred ecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCC
Confidence 99987654 3588999999999999976654
No 72
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.48 E-value=3e-13 Score=112.05 Aligned_cols=101 Identities=17% Similarity=0.207 Sum_probs=85.4
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
+.++.+|||+|||+|.++..+++.+. +++++|+++.+++.+++++.. ..++.++.+|+.......++||+|+
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~-------~~~i~~~~~d~~~~~~~~~~fD~v~ 112 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH-------VPQLRWETMDVRKLDFPSASFDVVL 112 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT-------CTTCEEEECCTTSCCSCSSCEEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc-------CCCcEEEEcchhcCCCCCCcccEEE
Confidence 36788999999999999999999986 799999999999999998643 3589999999987554557899999
Q ss_pred ecchhhh---------------------HHHHHHHhccCCcEEEEEecCC
Q psy7837 208 ISQAIRD---------------------IPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 208 ~~~~~~~---------------------~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+..+++. +.+++.++|+|||.+++.....
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 113 EKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp EESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred ECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 9877633 3457899999999999988765
No 73
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.48 E-value=2.4e-13 Score=110.39 Aligned_cols=105 Identities=22% Similarity=0.273 Sum_probs=87.5
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
...++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++++.+ ....++.+..+|........++||+|+
T Consensus 30 ~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~D~v~ 105 (192)
T 1l3i_A 30 EPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRH----GLGDNVTLMEGDAPEALCKIPDIDIAV 105 (192)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHT----TCCTTEEEEESCHHHHHTTSCCEEEEE
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHc----CCCcceEEEecCHHHhcccCCCCCEEE
Confidence 5677899999999999999999998889999999999999999998873 223689999999876333325799999
Q ss_pred ecchhh---hHHHHHHHhccCCcEEEEEecCC
Q psy7837 208 ISQAIR---DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 208 ~~~~~~---~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
++.+++ .+.+.+.++|+|||.+++.....
T Consensus 106 ~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~~~ 137 (192)
T 1l3i_A 106 VGGSGGELQEILRIIKDKLKPGGRIIVTAILL 137 (192)
T ss_dssp ESCCTTCHHHHHHHHHHTEEEEEEEEEEECBH
T ss_pred ECCchHHHHHHHHHHHHhcCCCcEEEEEecCc
Confidence 998754 45578899999999999987654
No 74
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.48 E-value=1.5e-13 Score=119.20 Aligned_cols=102 Identities=22% Similarity=0.151 Sum_probs=87.6
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCCe-EEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGAK-VYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~~-v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
..++.+|||+|||+|.++..+++.+.. |+++|+|+.+++.+++|++.+ +...+++++++|+..... .++||+|+
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n----~~~~~v~~~~~D~~~~~~-~~~fD~Vi 197 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLN----KVEDRMSAYNMDNRDFPG-ENIADRIL 197 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHT----TCTTTEEEECSCTTTCCC-CSCEEEEE
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHc----CCCceEEEEECCHHHhcc-cCCccEEE
Confidence 456899999999999999999999874 999999999999999999884 333459999999987655 57899999
Q ss_pred ecchhh--hHHHHHHHhccCCcEEEEEecC
Q psy7837 208 ISQAIR--DIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 208 ~~~~~~--~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
++.+.. .+.+++.++|+|||.+++....
T Consensus 198 ~~~p~~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 198 MGYVVRTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp ECCCSSGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ECCchhHHHHHHHHHHHCCCCeEEEEEEee
Confidence 987753 5678899999999999997654
No 75
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.48 E-value=1.1e-13 Score=116.71 Aligned_cols=101 Identities=20% Similarity=0.153 Sum_probs=84.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQ 210 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 210 (299)
++.+|||+|||+|.++..+++.+.+|+++|+++.+++.+++++... ....+++++++|+....+ ..+||+|++..
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~ 140 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSS----PKAEYFSFVKEDVFTWRP-TELFDLIFDYV 140 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTS----GGGGGEEEECCCTTTCCC-SSCEEEEEEES
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhcc----CCCcceEEEECchhcCCC-CCCeeEEEECh
Confidence 3469999999999999999999999999999999999999998652 244689999999987554 36899999988
Q ss_pred hhhhH--------HHHHHHhccCCcEEEEEecCC
Q psy7837 211 AIRDI--------PWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 211 ~~~~~--------~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+++++ .+++.++|+|||.+++.....
T Consensus 141 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 141 FFCAIEPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp STTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred hhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 77543 468899999999999876543
No 76
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.48 E-value=5.5e-13 Score=117.67 Aligned_cols=107 Identities=18% Similarity=0.065 Sum_probs=88.9
Q ss_pred hhhcccCCCCeEEEEcCCCcHHHHHHHHc-CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCC
Q psy7837 124 NFYGHLVYGSKVLDIGSGSGYLSALFAYM-GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAP 202 (299)
Q Consensus 124 ~~~~~~~~~~~vLDiG~G~G~~~~~la~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 202 (299)
.....+.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++... +...+++++.+|+.... ++
T Consensus 83 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~---~~ 155 (318)
T 2fk8_A 83 LDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASI----DTNRSRQVLLQGWEDFA---EP 155 (318)
T ss_dssp HTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTS----CCSSCEEEEESCGGGCC---CC
T ss_pred HHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----CCCCceEEEECChHHCC---CC
Confidence 33445678899999999999999999987 899999999999999999998763 23457999999987642 67
Q ss_pred eeEEEecchhhhH--------HHHHHHhccCCcEEEEEecCCC
Q psy7837 203 YDVIYISQAIRDI--------PWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 203 fD~v~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
||+|++..+++++ .+++.++|+|||++++......
T Consensus 156 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 156 VDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp CSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred cCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 9999999877654 3588999999999999876543
No 77
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.48 E-value=1.5e-13 Score=116.49 Aligned_cols=102 Identities=15% Similarity=0.131 Sum_probs=83.7
Q ss_pred CCCCeEEEEcCCCcHHHHHHHH--cCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCC---CCCee
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAY--MGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPD---AAPYD 204 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~--~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD 204 (299)
.++.+|||+|||+|..+..++. .+.+|+++|+++.+++.++++++. ....+++++++|+...... .++||
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~~~~fD 143 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEA-----LQLENTTFCHDRAETFGQRKDVRESYD 143 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH-----HTCSSEEEEESCHHHHTTCTTTTTCEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-----cCCCCEEEEeccHHHhcccccccCCcc
Confidence 5788999999999999999985 477899999999999999999987 3455799999998753321 46899
Q ss_pred EEEecchh--hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 205 VIYISQAI--RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 205 ~v~~~~~~--~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+|++.... ..+.+.+.++|+|||.+++.....
T Consensus 144 ~V~~~~~~~~~~~l~~~~~~LkpgG~l~~~~g~~ 177 (240)
T 1xdz_A 144 IVTARAVARLSVLSELCLPLVKKNGLFVALKAAS 177 (240)
T ss_dssp EEEEECCSCHHHHHHHHGGGEEEEEEEEEEECC-
T ss_pred EEEEeccCCHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 99987743 346678899999999999976543
No 78
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.48 E-value=1.2e-13 Score=116.50 Aligned_cols=100 Identities=21% Similarity=0.267 Sum_probs=83.8
Q ss_pred CCCCeEEEEcCCCcHHHHHHHH--cCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC--CCCCeeE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAY--MGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP--DAAPYDV 205 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~--~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~fD~ 205 (299)
.++.+|||+|||+|..+..+++ .+.+|+++|+++.+++.++++++.. +...+++++.+|+....+ ..++||+
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~~~~~~~fD~ 145 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATY----HFENQVRIIEGNALEQFENVNDKVYDM 145 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHT----TCTTTEEEEESCGGGCHHHHTTSCEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc----CCCCcEEEEECCHHHHHHhhccCCccE
Confidence 4688999999999999999998 4688999999999999999999873 233589999999986533 1478999
Q ss_pred EEecchhhh---HHHHHHHhccCCcEEEEEe
Q psy7837 206 IYISQAIRD---IPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 206 v~~~~~~~~---~~~~~~~~L~~gG~lv~~~ 233 (299)
|+++..... +.+.+.++|+|||++++..
T Consensus 146 V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 146 IFIDAAKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp EEEETTSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEEcCcHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 999886644 4578899999999998843
No 79
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.48 E-value=1.6e-13 Score=117.14 Aligned_cols=102 Identities=13% Similarity=0.158 Sum_probs=85.6
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCC---CCCee
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPD---AAPYD 204 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD 204 (299)
.++.+|||+|||+|..++.++.. +.+|+++|+++.+++.++++++. .+..+++++++|+...... .++||
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~l~~v~~~~~d~~~~~~~~~~~~~fD 153 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEV-----LGLKGARALWGRAEVLAREAGHREAYA 153 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH-----HTCSSEEEEECCHHHHTTSTTTTTCEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH-----hCCCceEEEECcHHHhhcccccCCCce
Confidence 56889999999999999999876 67899999999999999999988 4556799999998764332 36899
Q ss_pred EEEecchh--hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 205 VIYISQAI--RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 205 ~v~~~~~~--~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+|++.... ..+.+.+.++|+|||++++..+..
T Consensus 154 ~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~g~~ 187 (249)
T 3g89_A 154 RAVARAVAPLCVLSELLLPFLEVGGAAVAMKGPR 187 (249)
T ss_dssp EEEEESSCCHHHHHHHHGGGEEEEEEEEEEECSC
T ss_pred EEEECCcCCHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 99997653 456788999999999999877543
No 80
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.48 E-value=3.1e-13 Score=117.47 Aligned_cols=103 Identities=21% Similarity=0.339 Sum_probs=87.9
Q ss_pred hcccCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCC
Q psy7837 126 YGHLVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAP 202 (299)
Q Consensus 126 ~~~~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 202 (299)
+..+.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.+++++.. ...+++++++|+..... .++
T Consensus 17 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~------~~~~v~~~~~d~~~~~~-~~~ 89 (284)
T 3gu3_A 17 VWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRL------LPYDSEFLEGDATEIEL-NDK 89 (284)
T ss_dssp TSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHS------SSSEEEEEESCTTTCCC-SSC
T ss_pred HhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHh------cCCceEEEEcchhhcCc-CCC
Confidence 345678899999999999999999987 57999999999999999999876 22389999999987544 468
Q ss_pred eeEEEecchhhh------HHHHHHHhccCCcEEEEEecC
Q psy7837 203 YDVIYISQAIRD------IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 203 fD~v~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~ 235 (299)
||+|++..++++ +.+++.++|+|||.+++..+.
T Consensus 90 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 90 YDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred eeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 999999988754 346899999999999998776
No 81
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.48 E-value=9.4e-14 Score=116.16 Aligned_cols=102 Identities=16% Similarity=0.139 Sum_probs=85.3
Q ss_pred CCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC---CCCCCCeeE
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG---YPDAAPYDV 205 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~fD~ 205 (299)
++.+|||||||+|.++..+++. +..|+|+|+++.+++.++++++. .+..|+.++.+|+... ..+.++||.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~-----~~l~nv~~~~~Da~~~l~~~~~~~~~d~ 108 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHE-----EGLSNLRVMCHDAVEVLHKMIPDNSLRM 108 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH-----TTCSSEEEECSCHHHHHHHHSCTTCEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHH-----hCCCcEEEEECCHHHHHHHHcCCCChhe
Confidence 5789999999999999999987 46799999999999999999987 4667899999998753 134578999
Q ss_pred EEecchhh--------------hHHHHHHHhccCCcEEEEEecCCC
Q psy7837 206 IYISQAIR--------------DIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 206 v~~~~~~~--------------~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
|+++.+.. .+.+++.++|||||.+++.+....
T Consensus 109 v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~ 154 (218)
T 3dxy_A 109 VQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEP 154 (218)
T ss_dssp EEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHH
T ss_pred EEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHH
Confidence 99974321 377899999999999999987553
No 82
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.48 E-value=2.7e-13 Score=114.72 Aligned_cols=100 Identities=18% Similarity=0.214 Sum_probs=85.3
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEec
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYIS 209 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 209 (299)
.++.+|||+|||+|.++..+++.+.+++++|+++.+++.+++++... .. ++.++++|+...... ++||+|++.
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~-----~~-~~~~~~~d~~~~~~~-~~fD~v~~~ 108 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ-----GL-KPRLACQDISNLNIN-RKFDLITCC 108 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHT-----TC-CCEEECCCGGGCCCS-CCEEEEEEC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhc-----CC-CeEEEecccccCCcc-CCceEEEEc
Confidence 36789999999999999999999999999999999999999998762 22 799999998875444 789999999
Q ss_pred c-hhhhH---------HHHHHHhccCCcEEEEEecCC
Q psy7837 210 Q-AIRDI---------PWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 210 ~-~~~~~---------~~~~~~~L~~gG~lv~~~~~~ 236 (299)
. +++++ .+++.++|+|||.+++.+++.
T Consensus 109 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 109 LDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 8 77655 257889999999999977653
No 83
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.48 E-value=1.3e-13 Score=116.63 Aligned_cols=99 Identities=17% Similarity=0.122 Sum_probs=80.3
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC--CCCCCCeeEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG--YPDAAPYDVI 206 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~v 206 (299)
.++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++.+.. ..++.++++|+... ....++||+|
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~------~~~v~~~~~d~~~~~~~~~~~~fD~V 132 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQ------THKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGC------SSEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhc------CCCeEEEecCHHHhhcccCCCceEEE
Confidence 4578999999999999999988765 7999999999999999988762 26899999998764 3445789999
Q ss_pred Ee-cch-----hh-----hHHHHHHHhccCCcEEEEEec
Q psy7837 207 YI-SQA-----IR-----DIPWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 207 ~~-~~~-----~~-----~~~~~~~~~L~~gG~lv~~~~ 234 (299)
++ ... .+ .+.+++.++|||||++++...
T Consensus 133 ~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred EECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 99 222 11 235789999999999998653
No 84
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.47 E-value=1e-13 Score=117.37 Aligned_cols=127 Identities=18% Similarity=0.146 Sum_probs=89.7
Q ss_pred cccccccccccccccCC-cchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHH---hCCCceEEEEeCCHHHHHHHH
Q psy7837 34 TLLDIPHNIGHNAFMES-PSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAM---VGISGKVYTIEHIPELLEAAR 109 (299)
Q Consensus 34 ~y~~~~~~~~~~~~~~~-p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~---~~~~g~v~~~d~~~~~~~~a~ 109 (299)
.|.+.......+..+.. |.....+.+.+. ..++.+|||+|||+|+.+..+++. +++.++|+++|+++.+++.++
T Consensus 49 g~~~~~~~~~~~~~~~~~p~~~~~l~~~l~--~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~ 126 (236)
T 2bm8_A 49 GYSDFSPYQWRGLRMLKDPDTQAVYHDMLW--ELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA 126 (236)
T ss_dssp SSCCSSCCEETTEECCSCHHHHHHHHHHHH--HHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG
T ss_pred CCCcccccccccccccCCHHHHHHHHHHHH--hcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh
Confidence 34444333334555555 666666656555 346789999999999999999987 466678888888887766554
Q ss_pred HHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEE
Q psy7837 110 KRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFV 189 (299)
Q Consensus 110 ~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 189 (299)
. ...+++++
T Consensus 127 ----~-------------------------------------------------------------------~~~~v~~~ 135 (236)
T 2bm8_A 127 ----S-------------------------------------------------------------------DMENITLH 135 (236)
T ss_dssp ----G-------------------------------------------------------------------GCTTEEEE
T ss_pred ----c-------------------------------------------------------------------cCCceEEE
Confidence 1 12589999
Q ss_pred EcCCCCC----CCCCCCeeEEEecchh---hhHHHHHHH-hccCCcEEEEEe
Q psy7837 190 CADGRRG----YPDAAPYDVIYISQAI---RDIPWHIVD-QLKLGGRMLFIK 233 (299)
Q Consensus 190 ~~d~~~~----~~~~~~fD~v~~~~~~---~~~~~~~~~-~L~~gG~lv~~~ 233 (299)
++|+... .....+||+|+++... ..+..++.+ +|||||+|++..
T Consensus 136 ~gD~~~~~~l~~~~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 136 QGDCSDLTTFEHLREMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp ECCSSCSGGGGGGSSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred ECcchhHHHHHhhccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 9998864 1233479999987763 334567776 999999999964
No 85
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.47 E-value=4.9e-13 Score=116.51 Aligned_cols=104 Identities=19% Similarity=0.197 Sum_probs=86.9
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC-CCCCeeEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP-DAAPYDVI 206 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v 206 (299)
+.++.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++... ....++.++++|+..... ..++||+|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~~~~~~fD~v 137 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNM----KRRFKVFFRAQDSYGRHMDLGKEFDVI 137 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTS----CCSSEEEEEESCTTTSCCCCSSCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc----CCCccEEEEECCccccccCCCCCcCEE
Confidence 46789999999999999999988876 8999999999999999998763 233579999999986543 45789999
Q ss_pred Eecchhhh----------HHHHHHHhccCCcEEEEEecCC
Q psy7837 207 YISQAIRD----------IPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 207 ~~~~~~~~----------~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
++..++++ +.+++.++|+|||.+++..+..
T Consensus 138 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 138 SSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp EEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred EECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 99887743 3357899999999999998764
No 86
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.47 E-value=5.4e-13 Score=116.74 Aligned_cols=100 Identities=13% Similarity=0.060 Sum_probs=84.2
Q ss_pred CCCCeEEEEcCCCcHHHHHHH---HcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCC------
Q psy7837 130 VYGSKVLDIGSGSGYLSALFA---YMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDA------ 200 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la---~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~------ 200 (299)
.++.+|||+|||+|.++..++ ..+.+|+++|+|+.+++.++++++... ....+++++++|+.......
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~~v~~~~~d~~~~~~~~~~~~~~ 111 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSP---DTYKNVSFKISSSDDFKFLGADSVDK 111 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC----CCTTEEEEECCTTCCGGGCTTTTTS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcc---CCCCceEEEEcCHHhCCccccccccC
Confidence 478999999999999999999 457889999999999999999987620 13579999999998754444
Q ss_pred CCeeEEEecchhhh-----HHHHHHHhccCCcEEEEE
Q psy7837 201 APYDVIYISQAIRD-----IPWHIVDQLKLGGRMLFI 232 (299)
Q Consensus 201 ~~fD~v~~~~~~~~-----~~~~~~~~L~~gG~lv~~ 232 (299)
++||+|++..++++ +.+++.++|+|||.+++.
T Consensus 112 ~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 112 QKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEE
Confidence 78999999988764 456899999999999983
No 87
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.47 E-value=3.8e-13 Score=120.64 Aligned_cols=113 Identities=20% Similarity=0.092 Sum_probs=93.0
Q ss_pred HHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcC---CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCC
Q psy7837 119 YIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMG---AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRR 195 (299)
Q Consensus 119 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 195 (299)
+...+..+....++.+|||+|||+|.++..++..+ .+++++|+++.+++.|++|++.+ +..++++.++|+..
T Consensus 191 la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~-----g~~~i~~~~~D~~~ 265 (354)
T 3tma_A 191 LAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALAS-----GLSWIRFLRADARH 265 (354)
T ss_dssp HHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHT-----TCTTCEEEECCGGG
T ss_pred HHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHc-----CCCceEEEeCChhh
Confidence 33445555667788999999999999999999875 78999999999999999999883 44489999999987
Q ss_pred CCCCCCCeeEEEecchh--------------hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 196 GYPDAAPYDVIYISQAI--------------RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 196 ~~~~~~~fD~v~~~~~~--------------~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
.......||+|++++++ ..+.+++.++|+|||.+++.++..
T Consensus 266 ~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 266 LPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp GGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred CccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 55444669999998774 234468899999999999998765
No 88
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.47 E-value=1.4e-13 Score=113.41 Aligned_cols=97 Identities=15% Similarity=0.179 Sum_probs=83.7
Q ss_pred CCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecch
Q psy7837 132 GSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQA 211 (299)
Q Consensus 132 ~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 211 (299)
+.+|||+|||+|.++..+++.+.+++++|+++.+++.++++. .++.++++|+.......++||+|++..+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTH----------PSVTFHHGTITDLSDSPKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHC----------TTSEEECCCGGGGGGSCCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC----------CCCeEEeCcccccccCCCCeEEEEehhh
Confidence 889999999999999999999999999999999999998762 3789999998875545578999999887
Q ss_pred hhhH--------HHHHHHhccCCcEEEEEecCCCC
Q psy7837 212 IRDI--------PWHIVDQLKLGGRMLFIKGHEDD 238 (299)
Q Consensus 212 ~~~~--------~~~~~~~L~~gG~lv~~~~~~~~ 238 (299)
++++ .+++.++|+|||.+++.......
T Consensus 112 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 146 (203)
T 3h2b_A 112 LIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPS 146 (203)
T ss_dssp STTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSS
T ss_pred HhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCc
Confidence 6544 46899999999999999876543
No 89
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.47 E-value=1.5e-13 Score=115.08 Aligned_cols=118 Identities=11% Similarity=0.121 Sum_probs=91.2
Q ss_pred CcchHHHHHHHHhccC--CCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhc
Q psy7837 50 SPSDHCLVLELLSGHL--KYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYG 127 (299)
Q Consensus 50 ~p~~~~~~~~~l~~~~--~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 127 (299)
.|.. ..++..+.... +++.+|||+|||+|+.+..+++.+++.++++++|+++.+++.+++++...
T Consensus 38 ~~~~-~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------ 104 (221)
T 3dr5_A 38 DEMT-GQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREA------------ 104 (221)
T ss_dssp CHHH-HHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHT------------
T ss_pred CHHH-HHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------------
Confidence 3443 45555554322 34459999999999999999999877789999999999999999888772
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCC-CCeEEEEcCCCCCCC--CCCCee
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALA-ENFEFVCADGRRGYP--DAAPYD 204 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~--~~~~fD 204 (299)
+.. .+++++.+|+.+... ..++||
T Consensus 105 -----------------------------------------------------g~~~~~i~~~~gda~~~l~~~~~~~fD 131 (221)
T 3dr5_A 105 -----------------------------------------------------GYSPSRVRFLLSRPLDVMSRLANDSYQ 131 (221)
T ss_dssp -----------------------------------------------------TCCGGGEEEECSCHHHHGGGSCTTCEE
T ss_pred -----------------------------------------------------CCCcCcEEEEEcCHHHHHHHhcCCCcC
Confidence 233 589999999875322 247899
Q ss_pred EEEecchhhh---HHHHHHHhccCCcEEEEEe
Q psy7837 205 VIYISQAIRD---IPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 205 ~v~~~~~~~~---~~~~~~~~L~~gG~lv~~~ 233 (299)
+|+++..... ..+++.++|+|||.+++..
T Consensus 132 ~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 132 LVFGQVSPMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp EEEECCCTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred eEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 9999887654 4578899999999999854
No 90
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.47 E-value=5.3e-13 Score=113.78 Aligned_cols=103 Identities=14% Similarity=0.219 Sum_probs=84.8
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC---CCCCC
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG---YPDAA 201 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~ 201 (299)
...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++++.. +...+++++.+|+... ....+
T Consensus 60 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----g~~~~v~~~~~d~~~~l~~~~~~~ 135 (248)
T 3tfw_A 60 RLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLA----GVDQRVTLREGPALQSLESLGECP 135 (248)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHT----TCTTTEEEEESCHHHHHHTCCSCC
T ss_pred hhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc----CCCCcEEEEEcCHHHHHHhcCCCC
Confidence 3456899999999999999999987 679999999999999999999873 3345899999998642 22235
Q ss_pred CeeEEEecchhhh---HHHHHHHhccCCcEEEEEec
Q psy7837 202 PYDVIYISQAIRD---IPWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 202 ~fD~v~~~~~~~~---~~~~~~~~L~~gG~lv~~~~ 234 (299)
+||+|+++..... ..+++.++|+|||++++...
T Consensus 136 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 136 AFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 8999999887654 45688999999999998754
No 91
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.47 E-value=2.3e-13 Score=115.24 Aligned_cols=103 Identities=17% Similarity=0.220 Sum_probs=85.5
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcC-CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMG-AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
..++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.+++++.. ....++.++.+|+.......++||+|+
T Consensus 77 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~~~d~~~~~~~~~~fD~v~ 151 (241)
T 2ex4_A 77 KTGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGE-----EGKRVRNYFCCGLQDFTPEPDSYDVIW 151 (241)
T ss_dssp CCCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGG-----GGGGEEEEEECCGGGCCCCSSCEEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhh-----cCCceEEEEEcChhhcCCCCCCEEEEE
Confidence 3468899999999999999988874 5899999999999999999866 224578999999877655556899999
Q ss_pred ecchhhh--------HHHHHHHhccCCcEEEEEecCC
Q psy7837 208 ISQAIRD--------IPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 208 ~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+..++++ +.+++.++|+|||++++..+..
T Consensus 152 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 152 IQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMA 188 (241)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccC
Confidence 9987654 3467899999999999976543
No 92
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.47 E-value=4e-13 Score=108.95 Aligned_cols=106 Identities=21% Similarity=0.180 Sum_probs=84.6
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcC-CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC----CCCCe
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMG-AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP----DAAPY 203 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~f 203 (299)
..++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.++++++.+ ....+++++++|+..... ..++|
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~f 117 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAIT----KEPEKFEVRKMDANRALEQFYEEKLQF 117 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHH----TCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHh----CCCcceEEEECcHHHHHHHHHhcCCCC
Confidence 3568899999999999999888876 58999999999999999999873 223579999999875321 14679
Q ss_pred eEEEecchhh-----hHHHHH--HHhccCCcEEEEEecCCCC
Q psy7837 204 DVIYISQAIR-----DIPWHI--VDQLKLGGRMLFIKGHEDD 238 (299)
Q Consensus 204 D~v~~~~~~~-----~~~~~~--~~~L~~gG~lv~~~~~~~~ 238 (299)
|+|+++.++. .....+ .++|+|||.+++..+....
T Consensus 118 D~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 118 DLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp EEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred CEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 9999998743 233455 7789999999999877653
No 93
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.47 E-value=3.8e-13 Score=116.22 Aligned_cols=104 Identities=20% Similarity=0.129 Sum_probs=89.4
Q ss_pred cccCCCCeEEEEcCCCcHHHHHHHHcC--CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCee
Q psy7837 127 GHLVYGSKVLDIGSGSGYLSALFAYMG--AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYD 204 (299)
Q Consensus 127 ~~~~~~~~vLDiG~G~G~~~~~la~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 204 (299)
..+.++.+|||+|||+|.+++.+++.+ .+|+++|+++.+++.+++|++. ....++.++.+|+... +..++||
T Consensus 115 ~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~-----n~l~~~~~~~~d~~~~-~~~~~~D 188 (272)
T 3a27_A 115 FISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKL-----NKLNNVIPILADNRDV-ELKDVAD 188 (272)
T ss_dssp TSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHH-----TTCSSEEEEESCGGGC-CCTTCEE
T ss_pred HhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-----cCCCCEEEEECChHHc-CccCCce
Confidence 346788999999999999999999884 4899999999999999999988 4556899999999876 3356899
Q ss_pred EEEecchh--hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 205 VIYISQAI--RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 205 ~v~~~~~~--~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+|+++.+. ..+...+.+.|+|||++++++...
T Consensus 189 ~Vi~d~p~~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 189 RVIMGYVHKTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp EEEECCCSSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEEECCcccHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 99999874 556788999999999999988654
No 94
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.46 E-value=4.2e-13 Score=110.78 Aligned_cols=101 Identities=19% Similarity=0.168 Sum_probs=85.1
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
+.++.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++++. ....+++++.+|+.... .++||+|+
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~v~~~~~d~~~~~--~~~fD~i~ 130 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAAL-----NGIYDIALQKTSLLADV--DGKFDLIV 130 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH-----TTCCCCEEEESSTTTTC--CSCEEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH-----cCCCceEEEeccccccC--CCCceEEE
Confidence 35688999999999999999999865 899999999999999999987 34455999999987643 36899999
Q ss_pred ecchhhhHH---HHHHHhccCCcEEEEEecCC
Q psy7837 208 ISQAIRDIP---WHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 208 ~~~~~~~~~---~~~~~~L~~gG~lv~~~~~~ 236 (299)
++.+++++. +++.++|+|||++++.....
T Consensus 131 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 131 ANILAEILLDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp EESCHHHHHHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred ECCcHHHHHHHHHHHHHhcCCCCEEEEEecCc
Confidence 998887653 57888999999999975443
No 95
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.46 E-value=8.9e-13 Score=112.24 Aligned_cols=100 Identities=19% Similarity=0.213 Sum_probs=83.0
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEe
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYI 208 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 208 (299)
..++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.+++++... ..++.++++|+...... ++||+|++
T Consensus 39 ~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~------~~~v~~~~~d~~~~~~~-~~fD~v~~ 111 (252)
T 1wzn_A 39 KREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKER------NLKIEFLQGDVLEIAFK-NEFDAVTM 111 (252)
T ss_dssp SSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCCEEEESCGGGCCCC-SCEEEEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhc------CCceEEEECChhhcccC-CCccEEEE
Confidence 356789999999999999999999999999999999999999998762 23799999999875443 67999997
Q ss_pred cch-h--------hhHHHHHHHhccCCcEEEEEecC
Q psy7837 209 SQA-I--------RDIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 209 ~~~-~--------~~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
... . ..+.+++.++|+|||.+++..++
T Consensus 112 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 112 FFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp CSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 532 2 23446889999999999998765
No 96
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.46 E-value=4.7e-13 Score=117.11 Aligned_cols=100 Identities=21% Similarity=0.286 Sum_probs=83.7
Q ss_pred CCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCC---CCeEEEEcCCCCCCCCCCCeeEEEe
Q psy7837 132 GSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALA---ENFEFVCADGRRGYPDAAPYDVIYI 208 (299)
Q Consensus 132 ~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~fD~v~~ 208 (299)
+.+|||+|||+|.++..+++.+.+|+++|+++.+++.+++++... .. .+++++++|+..... .++||+|++
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~ 156 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEA-----PADVRDRCTLVQGDMSAFAL-DKRFGTVVI 156 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTS-----CHHHHTTEEEEECBTTBCCC-SCCEEEEEE
T ss_pred CCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhc-----ccccccceEEEeCchhcCCc-CCCcCEEEE
Confidence 459999999999999999999999999999999999999998762 21 689999999987544 578999986
Q ss_pred cc-hhh--------hHHHHHHHhccCCcEEEEEecCCC
Q psy7837 209 SQ-AIR--------DIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 209 ~~-~~~--------~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
.. .++ .+.+++.++|+|||.|++.+....
T Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 157 SSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred CCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 53 332 344689999999999999987654
No 97
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.46 E-value=3.4e-13 Score=108.61 Aligned_cols=106 Identities=15% Similarity=0.155 Sum_probs=84.6
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcC-CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC-CCCCCeeEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMG-AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY-PDAAPYDVI 206 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v 206 (299)
..++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.++++++.+ ....+++++.+|+.... ...++||+|
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~fD~i 104 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMT----KAENRFTLLKMEAERAIDCLTGRFDLV 104 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTT----TCGGGEEEECSCHHHHHHHBCSCEEEE
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHc----CCCCceEEEECcHHHhHHhhcCCCCEE
Confidence 5678899999999999999999886 58999999999999999999873 22347999999987521 122569999
Q ss_pred Eecchhh-----hHHHHHH--HhccCCcEEEEEecCCCC
Q psy7837 207 YISQAIR-----DIPWHIV--DQLKLGGRMLFIKGHEDD 238 (299)
Q Consensus 207 ~~~~~~~-----~~~~~~~--~~L~~gG~lv~~~~~~~~ 238 (299)
+++.++. ...+.+. ++|+|||.+++.......
T Consensus 105 ~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 105 FLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp EECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred EECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 9997753 2334555 889999999999877653
No 98
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.46 E-value=7.5e-13 Score=118.05 Aligned_cols=107 Identities=25% Similarity=0.320 Sum_probs=86.1
Q ss_pred HHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC
Q psy7837 119 YIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY 197 (299)
Q Consensus 119 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 197 (299)
+.+.+.......++.+|||+|||+|.++..+++.+. +|+++|+++ +++.++++++.+ +...+++++.+|+....
T Consensus 52 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~----~~~~~i~~~~~d~~~~~ 126 (340)
T 2fyt_A 52 YRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLN----KLEDTITLIKGKIEEVH 126 (340)
T ss_dssp HHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHT----TCTTTEEEEESCTTTSC
T ss_pred HHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHc----CCCCcEEEEEeeHHHhc
Confidence 334455555667899999999999999999999976 799999997 999999998874 33478999999998755
Q ss_pred CCCCCeeEEEecch---h------hhHHHHHHHhccCCcEEE
Q psy7837 198 PDAAPYDVIYISQA---I------RDIPWHIVDQLKLGGRML 230 (299)
Q Consensus 198 ~~~~~fD~v~~~~~---~------~~~~~~~~~~L~~gG~lv 230 (299)
.+.++||+|+++.. + ..+..++.++|||||.++
T Consensus 127 ~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 127 LPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 55578999998762 2 235567789999999987
No 99
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.46 E-value=4.8e-13 Score=115.77 Aligned_cols=118 Identities=19% Similarity=0.167 Sum_probs=88.1
Q ss_pred CcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhccc
Q psy7837 50 SPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHL 129 (299)
Q Consensus 50 ~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 129 (299)
.|.....+++.+. +.++.+|||+|||+|.++..+++.+.+.++++++|+++.+++.+++++..
T Consensus 95 ~~~~~~~~~~~~~--~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~--------------- 157 (275)
T 1yb2_A 95 SEIDASYIIMRCG--LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSE--------------- 157 (275)
T ss_dssp -----------CC--CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHT---------------
T ss_pred ChhhHHHHHHHcC--CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHh---------------
Confidence 3333344555544 78999999999999999999998876667888888888888888877765
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCccc-CCCCeEEEEcCCCCCCCCCCCeeEEEe
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIA-LAENFEFVCADGRRGYPDAAPYDVIYI 208 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~v~~ 208 (299)
. +..+++++.+|+.... ..++||+|++
T Consensus 158 ---------------------------------------------------~~g~~~v~~~~~d~~~~~-~~~~fD~Vi~ 185 (275)
T 1yb2_A 158 ---------------------------------------------------FYDIGNVRTSRSDIADFI-SDQMYDAVIA 185 (275)
T ss_dssp ---------------------------------------------------TSCCTTEEEECSCTTTCC-CSCCEEEEEE
T ss_pred ---------------------------------------------------cCCCCcEEEEECchhccC-cCCCccEEEE
Confidence 3 4568999999998743 3468999999
Q ss_pred cchh-hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 209 SQAI-RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 209 ~~~~-~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+..- ..+.+++.++|+|||++++..+..
T Consensus 186 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 186 DIPDPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp CCSCGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred cCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 7653 357789999999999999998765
No 100
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.45 E-value=6.4e-13 Score=110.89 Aligned_cols=111 Identities=23% Similarity=0.291 Sum_probs=87.0
Q ss_pred HHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEE
Q psy7837 58 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLD 137 (299)
Q Consensus 58 ~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLD 137 (299)
++.+.+.+.+|++|+|+|||+|+++..++.. ++.++++++|+++..++.|++++...
T Consensus 6 L~~l~~~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~---------------------- 62 (225)
T 3kr9_A 6 LELVASFVSQGAILLDVGSDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAH---------------------- 62 (225)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHc----------------------
Confidence 4455666889999999999999999999875 45567888888888888888887762
Q ss_pred EcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecch----hh
Q psy7837 138 IGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQA----IR 213 (299)
Q Consensus 138 iG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~----~~ 213 (299)
+...+++++.+|.........+||+|++.+. +.
T Consensus 63 -------------------------------------------gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~Gg~~i~ 99 (225)
T 3kr9_A 63 -------------------------------------------GLKEKIQVRLANGLAAFEETDQVSVITIAGMGGRLIA 99 (225)
T ss_dssp -------------------------------------------TCTTTEEEEECSGGGGCCGGGCCCEEEEEEECHHHHH
T ss_pred -------------------------------------------CCCceEEEEECchhhhcccCcCCCEEEEcCCChHHHH
Confidence 3445799999999765554336998876543 45
Q ss_pred hHHHHHHHhccCCcEEEEEec
Q psy7837 214 DIPWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 214 ~~~~~~~~~L~~gG~lv~~~~ 234 (299)
.+.+.....|+++|+++++-.
T Consensus 100 ~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 100 RILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp HHHHHTGGGCTTCCEEEEEES
T ss_pred HHHHHHHHHhCCCCEEEEECC
Confidence 677888999999999999765
No 101
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.45 E-value=5.2e-13 Score=114.05 Aligned_cols=98 Identities=20% Similarity=0.216 Sum_probs=84.1
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDV 205 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 205 (299)
...++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++ ..++.++.+|+.... ..++||+
T Consensus 30 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~----------~~~~~~~~~d~~~~~-~~~~fD~ 98 (259)
T 2p35_A 30 PLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR----------LPNTNFGKADLATWK-PAQKADL 98 (259)
T ss_dssp CCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH----------STTSEEEECCTTTCC-CSSCEEE
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----------CCCcEEEECChhhcC-ccCCcCE
Confidence 4567889999999999999999988 88999999999999999876 247899999998755 5578999
Q ss_pred EEecchhhhH------HHHHHHhccCCcEEEEEecCC
Q psy7837 206 IYISQAIRDI------PWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 206 v~~~~~~~~~------~~~~~~~L~~gG~lv~~~~~~ 236 (299)
|++..+++++ .+++.++|+|||.+++..+..
T Consensus 99 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 99 LYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp EEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred EEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 9999987654 357899999999999988643
No 102
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.45 E-value=1.8e-13 Score=117.47 Aligned_cols=97 Identities=22% Similarity=0.240 Sum_probs=81.8
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
...++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.++++ .+++++++|+.....+.++||+|+
T Consensus 31 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-----------~~~~~~~~d~~~~~~~~~~fD~v~ 99 (261)
T 3ege_A 31 NLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVH-----------PQVEWFTGYAENLALPDKSVDGVI 99 (261)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCC-----------TTEEEECCCTTSCCSCTTCBSEEE
T ss_pred CCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhc-----------cCCEEEECchhhCCCCCCCEeEEE
Confidence 346789999999999999999999999999999999998876543 289999999987655568899999
Q ss_pred ecchhhh------HHHHHHHhccCCcEEEEEecCC
Q psy7837 208 ISQAIRD------IPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 208 ~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+..++++ +.+++.++|| ||.+++.....
T Consensus 100 ~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 100 SILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp EESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECG
T ss_pred EcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCC
Confidence 9998765 3468999999 99888876553
No 103
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.45 E-value=6.5e-13 Score=111.05 Aligned_cols=112 Identities=21% Similarity=0.322 Sum_probs=87.9
Q ss_pred HHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEE
Q psy7837 58 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLD 137 (299)
Q Consensus 58 ~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLD 137 (299)
++.+...+.+|++|+|+|||+|+++..+++. ++..+++++|+++..++.|++++...
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~---------------------- 68 (230)
T 3lec_A 12 LQKVANYVPKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEH---------------------- 68 (230)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHhCCCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHc----------------------
Confidence 3455666889999999999999999999876 44567888888888888888887762
Q ss_pred EcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecch----hh
Q psy7837 138 IGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQA----IR 213 (299)
Q Consensus 138 iG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~----~~ 213 (299)
+...+++++.+|......+..+||+|++.+. +.
T Consensus 69 -------------------------------------------gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmGg~lI~ 105 (230)
T 3lec_A 69 -------------------------------------------GLTSKIDVRLANGLSAFEEADNIDTITICGMGGRLIA 105 (230)
T ss_dssp -------------------------------------------TCTTTEEEEECSGGGGCCGGGCCCEEEEEEECHHHHH
T ss_pred -------------------------------------------CCCCcEEEEECchhhccccccccCEEEEeCCchHHHH
Confidence 3456799999999876655447999875543 45
Q ss_pred hHHHHHHHhccCCcEEEEEecC
Q psy7837 214 DIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 214 ~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
.+.+.....|+++|+|+++-..
T Consensus 106 ~IL~~~~~~l~~~~~lIlqp~~ 127 (230)
T 3lec_A 106 DILNNDIDKLQHVKTLVLQPNN 127 (230)
T ss_dssp HHHHHTGGGGTTCCEEEEEESS
T ss_pred HHHHHHHHHhCcCCEEEEECCC
Confidence 6667888899999999988754
No 104
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.45 E-value=7.2e-13 Score=116.90 Aligned_cols=106 Identities=15% Similarity=0.162 Sum_probs=87.1
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCcH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSGY 144 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~ 144 (299)
+++|++|||+|||+|..+..+++.++..++++++|+++.+++.+++++..
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~------------------------------ 165 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSR------------------------------ 165 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH------------------------------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHH------------------------------
Confidence 88999999999999999999999887778899999999999988888876
Q ss_pred HHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecchh------------
Q psy7837 145 LSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQAI------------ 212 (299)
Q Consensus 145 ~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~------------ 212 (299)
.+..++.++++|+.......++||+|+++.+.
T Consensus 166 ------------------------------------~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~ 209 (315)
T 1ixk_A 166 ------------------------------------LGVLNVILFHSSSLHIGELNVEFDKILLDAPCTGSGTIHKNPER 209 (315)
T ss_dssp ------------------------------------HTCCSEEEESSCGGGGGGGCCCEEEEEEECCTTSTTTCC-----
T ss_pred ------------------------------------hCCCeEEEEECChhhcccccccCCEEEEeCCCCCcccccCChhH
Confidence 34558999999987643334679999997652
Q ss_pred ----------------hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 213 ----------------RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 213 ----------------~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
..+.+++.++|||||++++++...
T Consensus 210 ~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 210 KWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 244568899999999999976543
No 105
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.45 E-value=3.2e-13 Score=112.96 Aligned_cols=104 Identities=19% Similarity=0.246 Sum_probs=84.4
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCC-----
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPD----- 199 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~----- 199 (299)
...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++++.. +...+++++.+|+......
T Consensus 55 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~~~~~~~ 130 (223)
T 3duw_A 55 QIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERA----NLNDRVEVRTGLALDSLQQIENEK 130 (223)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHT----TCTTTEEEEESCHHHHHHHHHHTT
T ss_pred HhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc----CCCCcEEEEEcCHHHHHHHHHhcC
Confidence 3456899999999999999999987 789999999999999999999873 3345699999998643211
Q ss_pred CCCeeEEEecchhhh---HHHHHHHhccCCcEEEEEecC
Q psy7837 200 AAPYDVIYISQAIRD---IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 200 ~~~fD~v~~~~~~~~---~~~~~~~~L~~gG~lv~~~~~ 235 (299)
.++||+|+++..... +.+.+.++|+|||.+++....
T Consensus 131 ~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 131 YEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred CCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 156999999987654 456889999999998886543
No 106
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.45 E-value=7.3e-13 Score=114.70 Aligned_cols=99 Identities=26% Similarity=0.377 Sum_probs=84.8
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
...++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.++++. .++.++.+|+..... .++||+|+
T Consensus 54 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~-~~~fD~v~ 122 (279)
T 3ccf_A 54 NPQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY----------PHLHFDVADARNFRV-DKPLDAVF 122 (279)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----------TTSCEEECCTTTCCC-SSCEEEEE
T ss_pred CCCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC----------CCCEEEECChhhCCc-CCCcCEEE
Confidence 3467889999999999999999999999999999999999998763 478899999987544 47899999
Q ss_pred ecchhhh------HHHHHHHhccCCcEEEEEecCCC
Q psy7837 208 ISQAIRD------IPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 208 ~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
+..++++ +.+++.++|+|||++++..+...
T Consensus 123 ~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 123 SNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred EcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 9998865 44689999999999999887643
No 107
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.45 E-value=5.6e-13 Score=113.50 Aligned_cols=101 Identities=21% Similarity=0.192 Sum_probs=85.4
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcC-CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMG-AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVI 206 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 206 (299)
...++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.+++++.. . .++.++++|+.......++||+|
T Consensus 90 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~--~~~~~~~~d~~~~~~~~~~fD~v 162 (254)
T 1xtp_A 90 PGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG-----M--PVGKFILASMETATLPPNTYDLI 162 (254)
T ss_dssp TTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT-----S--SEEEEEESCGGGCCCCSSCEEEE
T ss_pred cccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhcc-----C--CceEEEEccHHHCCCCCCCeEEE
Confidence 34578899999999999999998874 5699999999999999998754 2 68999999988755555789999
Q ss_pred EecchhhhH--------HHHHHHhccCCcEEEEEecC
Q psy7837 207 YISQAIRDI--------PWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 207 ~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~~ 235 (299)
++..+++++ .+++.++|+|||.+++..+.
T Consensus 163 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 199 (254)
T 1xtp_A 163 VIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENC 199 (254)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 999887665 35789999999999998753
No 108
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.45 E-value=7.2e-13 Score=119.53 Aligned_cols=106 Identities=15% Similarity=0.283 Sum_probs=86.2
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVI 206 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 206 (299)
..++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.++++++.++- ....+++++.+|+..... .++||+|
T Consensus 220 ~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl--~~~~~v~~~~~D~~~~~~-~~~fD~I 296 (375)
T 4dcm_A 220 ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP--EALDRCEFMINNALSGVE-PFRFNAV 296 (375)
T ss_dssp CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCG--GGGGGEEEEECSTTTTCC-TTCEEEE
T ss_pred ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCC--CcCceEEEEechhhccCC-CCCeeEE
Confidence 345689999999999999999988 67899999999999999999987410 012368899999987543 4689999
Q ss_pred Eecchhh-----------hHHHHHHHhccCCcEEEEEecCCC
Q psy7837 207 YISQAIR-----------DIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 207 ~~~~~~~-----------~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
+++.+++ .+.+++.++|+|||+++++.+...
T Consensus 297 i~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 297 LCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp EECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred EECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCc
Confidence 9998865 245789999999999999876554
No 109
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.45 E-value=1.9e-13 Score=109.21 Aligned_cols=102 Identities=16% Similarity=0.153 Sum_probs=84.6
Q ss_pred CCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC----CCCCeeEE
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP----DAAPYDVI 206 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD~v 206 (299)
++.+|||+|||+|.++..+++.+..|+++|+++.+++.++++++.+ .. +++++++|+..... ..++||+|
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~-~~~~~~~d~~~~~~~~~~~~~~~D~i 114 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRT-----GL-GARVVALPVEVFLPEAKAQGERFTVA 114 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHH-----TC-CCEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHc-----CC-ceEEEeccHHHHHHhhhccCCceEEE
Confidence 6889999999999999999999988999999999999999999873 33 89999999875221 12479999
Q ss_pred Eecchh----hhHHHHHH--HhccCCcEEEEEecCCCC
Q psy7837 207 YISQAI----RDIPWHIV--DQLKLGGRMLFIKGHEDD 238 (299)
Q Consensus 207 ~~~~~~----~~~~~~~~--~~L~~gG~lv~~~~~~~~ 238 (299)
+++.++ ..+.+.+. ++|+|||.+++.+.....
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 115 FMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp EECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred EECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 999765 34556666 899999999999887653
No 110
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.44 E-value=3.6e-13 Score=113.09 Aligned_cols=93 Identities=20% Similarity=0.251 Sum_probs=81.0
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCC-CCCC-CCCeeEEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRR-GYPD-AAPYDVIY 207 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~~fD~v~ 207 (299)
.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++ ..+++++++|+.. .... .++||+|+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~d~~~~~~~~~~~~fD~v~ 116 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN----------APHADVYEWNGKGELPAGLGAPFGLIV 116 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH----------CTTSEEEECCSCSSCCTTCCCCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh----------CCCceEEEcchhhccCCcCCCCEEEEE
Confidence 5689999999999999999999999999999999999999887 2378999999953 3333 57899999
Q ss_pred ecchhhhHHHHHHHhccCCcEEEEE
Q psy7837 208 ISQAIRDIPWHIVDQLKLGGRMLFI 232 (299)
Q Consensus 208 ~~~~~~~~~~~~~~~L~~gG~lv~~ 232 (299)
++.....+.+++.++|||||.++..
T Consensus 117 ~~~~~~~~l~~~~~~LkpgG~l~~~ 141 (226)
T 3m33_A 117 SRRGPTSVILRLPELAAPDAHFLYV 141 (226)
T ss_dssp EESCCSGGGGGHHHHEEEEEEEEEE
T ss_pred eCCCHHHHHHHHHHHcCCCcEEEEe
Confidence 9977778888999999999999933
No 111
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.44 E-value=2.2e-12 Score=109.50 Aligned_cols=110 Identities=22% Similarity=0.309 Sum_probs=91.9
Q ss_pred HhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCC
Q psy7837 123 INFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAP 202 (299)
Q Consensus 123 ~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 202 (299)
+.....+.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++++.. ....++++..+|+.......++
T Consensus 83 ~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~ 158 (248)
T 2yvl_A 83 IALKLNLNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKF----NLGKNVKFFNVDFKDAEVPEGI 158 (248)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHT----TCCTTEEEECSCTTTSCCCTTC
T ss_pred HHHhcCCCCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHc----CCCCcEEEEEcChhhcccCCCc
Confidence 333445678999999999999999999988889999999999999999998773 2336899999999875524468
Q ss_pred eeEEEecchhh-hHHHHHHHhccCCcEEEEEecCC
Q psy7837 203 YDVIYISQAIR-DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 203 fD~v~~~~~~~-~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
||+|+++..-. .+.+++.++|+|||++++..+..
T Consensus 159 ~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 159 FHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp BSEEEECSSCGGGGHHHHHHHBCTTCEEEEEESSH
T ss_pred ccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 99999987644 67789999999999999998864
No 112
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.44 E-value=1.7e-13 Score=115.94 Aligned_cols=98 Identities=17% Similarity=0.122 Sum_probs=78.8
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcC-CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC--CCCCCCeeEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMG-AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG--YPDAAPYDVI 206 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~v 206 (299)
.+|.+|||||||+|..+..+++.. .+++++|+|+.+++.|+++.+. ...++.++.+|+... ..+.++||.|
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~------~~~~~~~~~~~a~~~~~~~~~~~FD~i 132 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPR------QTHKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGG------CSSEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhh------CCCceEEEeehHHhhcccccccCCceE
Confidence 458999999999999999998874 6799999999999999998876 345788888887632 2345789999
Q ss_pred Eecchh-----h------hHHHHHHHhccCCcEEEEEe
Q psy7837 207 YISQAI-----R------DIPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 207 ~~~~~~-----~------~~~~~~~~~L~~gG~lv~~~ 233 (299)
+.+... . .+.+++.++|||||+|++..
T Consensus 133 ~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred EEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 876542 1 24468999999999998753
No 113
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.44 E-value=7.4e-13 Score=118.52 Aligned_cols=106 Identities=23% Similarity=0.238 Sum_probs=85.4
Q ss_pred HHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCC
Q psy7837 121 KRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPD 199 (299)
Q Consensus 121 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 199 (299)
+.+.....+.++.+|||+|||+|.++..+++.+. +|+++|+|+ +++.|+++++.+ +...+++++.+|+.....+
T Consensus 56 ~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~----~~~~~v~~~~~d~~~~~~~ 130 (349)
T 3q7e_A 56 NSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKAN----KLDHVVTIIKGKVEEVELP 130 (349)
T ss_dssp HHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHT----TCTTTEEEEESCTTTCCCS
T ss_pred HHHHhccccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHc----CCCCcEEEEECcHHHccCC
Confidence 3444444567899999999999999999999976 899999995 999999999874 3445699999999876555
Q ss_pred CCCeeEEEecch---------hhhHHHHHHHhccCCcEEEE
Q psy7837 200 AAPYDVIYISQA---------IRDIPWHIVDQLKLGGRMLF 231 (299)
Q Consensus 200 ~~~fD~v~~~~~---------~~~~~~~~~~~L~~gG~lv~ 231 (299)
.++||+|++... +..+..++.++|||||+++.
T Consensus 131 ~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 131 VEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp SSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred CCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 578999998653 23455678899999999874
No 114
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.44 E-value=1.8e-12 Score=107.06 Aligned_cols=100 Identities=17% Similarity=0.204 Sum_probs=84.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEe
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYI 208 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 208 (299)
++.+|||+|||+|.++..++.. +.+++++|+++.+++.+++++.. ....+++++.+|+.... ..++||+|++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~v~~~~~d~~~~~-~~~~~D~i~~ 138 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHE-----LKLENIEPVQSRVEEFP-SEPPFDGVIS 138 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH-----TTCSSEEEEECCTTTSC-CCSCEEEEEC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH-----cCCCCeEEEecchhhCC-ccCCcCEEEE
Confidence 5789999999999999999876 67899999999999999999887 34556999999998754 3368999998
Q ss_pred cch--hhhHHHHHHHhccCCcEEEEEecCC
Q psy7837 209 SQA--IRDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 209 ~~~--~~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+.. ...+.+.+.++|+|||.+++..+..
T Consensus 139 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 168 (207)
T 1jsx_A 139 RAFASLNDMVSWCHHLPGEQGRFYALKGQM 168 (207)
T ss_dssp SCSSSHHHHHHHHTTSEEEEEEEEEEESSC
T ss_pred eccCCHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 753 2446678999999999999987654
No 115
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.44 E-value=1.3e-12 Score=112.03 Aligned_cols=93 Identities=13% Similarity=0.077 Sum_probs=80.6
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEec
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYIS 209 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 209 (299)
.++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.+++++ .++.++++|+..... .++||+|++.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~-~~~fD~v~~~ 117 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRN----------PDAVLHHGDMRDFSL-GRRFSAVTCM 117 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHC----------TTSEEEECCTTTCCC-SCCEEEEEEC
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhC----------CCCEEEECChHHCCc-cCCcCEEEEc
Confidence 45789999999999999999999999999999999999998873 278999999987544 5789999998
Q ss_pred c-hhhhH---------HHHHHHhccCCcEEEEEe
Q psy7837 210 Q-AIRDI---------PWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 210 ~-~~~~~---------~~~~~~~L~~gG~lv~~~ 233 (299)
. +++++ .+++.++|+|||.+++..
T Consensus 118 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 118 FSSIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp TTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 7 76554 357899999999999974
No 116
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.43 E-value=5.4e-13 Score=114.52 Aligned_cols=105 Identities=16% Similarity=0.183 Sum_probs=85.2
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcC--CeEEEEeCChHHHHHHHHHHHh---cCCcccCCCCeEEEEcCCCCCC-----
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMG--AKVYAIEHVKNLCKRAMKNIRR---GAPAIALAENFEFVCADGRRGY----- 197 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~--~~v~~~D~~~~~~~~a~~~~~~---~~~~~~~~~~v~~~~~d~~~~~----- 197 (299)
...++.+|||+|||+|.+++.+++.. .+|+++|+++.+++.++++++. + ....+++++++|+....
T Consensus 33 ~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~----~l~~~v~~~~~D~~~~~~~~~~ 108 (260)
T 2ozv_A 33 ADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNA----AFSARIEVLEADVTLRAKARVE 108 (260)
T ss_dssp CCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGT----TTGGGEEEEECCTTCCHHHHHH
T ss_pred cccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhC----CCcceEEEEeCCHHHHhhhhhh
Confidence 45568899999999999999999874 6899999999999999999865 4 33457999999998651
Q ss_pred --CCCCCeeEEEecchhh------------------------hHHHHHHHhccCCcEEEEEecCC
Q psy7837 198 --PDAAPYDVIYISQAIR------------------------DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 198 --~~~~~fD~v~~~~~~~------------------------~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
...++||+|++++++. .+.+.+.++|+|||++++..+..
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 173 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ 173 (260)
T ss_dssp TTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred hccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH
Confidence 2347899999985542 34567889999999999987654
No 117
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.43 E-value=6.1e-13 Score=119.44 Aligned_cols=108 Identities=26% Similarity=0.294 Sum_probs=85.7
Q ss_pred HHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC
Q psy7837 118 TYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG 196 (299)
Q Consensus 118 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 196 (299)
+|.+.|.......++++|||||||+|.+++.+++.|+ +|+++|.|+ +++.|+++++.| +...+++++.+|+...
T Consensus 70 aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n----~~~~~i~~i~~~~~~~ 144 (376)
T 4hc4_A 70 AYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFN----GLEDRVHVLPGPVETV 144 (376)
T ss_dssp HHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHT----TCTTTEEEEESCTTTC
T ss_pred HHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHc----CCCceEEEEeeeeeee
Confidence 4455565555667899999999999999999999987 599999996 789999999885 5667899999999875
Q ss_pred CCCCCCeeEEEecch---------hhhHHHHHHHhccCCcEEEE
Q psy7837 197 YPDAAPYDVIYISQA---------IRDIPWHIVDQLKLGGRMLF 231 (299)
Q Consensus 197 ~~~~~~fD~v~~~~~---------~~~~~~~~~~~L~~gG~lv~ 231 (299)
..+ .++|+|++... +..+.....++|+|||.++-
T Consensus 145 ~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 145 ELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cCC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 444 67999997332 23445567799999998764
No 118
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.43 E-value=1.9e-13 Score=114.45 Aligned_cols=104 Identities=18% Similarity=0.229 Sum_probs=84.3
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC---C--
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP---D-- 199 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---~-- 199 (299)
...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++++.. +...+++++++|+..... .
T Consensus 61 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~~~~~~~ 136 (225)
T 3tr6_A 61 KLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKA----GLSDKIGLRLSPAKDTLAELIHAG 136 (225)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHT----TCTTTEEEEESCHHHHHHHHHTTT
T ss_pred HhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHC----CCCCceEEEeCCHHHHHHHhhhcc
Confidence 3456889999999999999999987 788999999999999999999873 234569999999864221 1
Q ss_pred -CCCeeEEEecchhh---hHHHHHHHhccCCcEEEEEecC
Q psy7837 200 -AAPYDVIYISQAIR---DIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 200 -~~~fD~v~~~~~~~---~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
.++||+|+++.... .+.+.+.++|+|||++++....
T Consensus 137 ~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 137 QAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred CCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 16799999988754 3457889999999999986543
No 119
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.43 E-value=3.4e-13 Score=114.21 Aligned_cols=121 Identities=20% Similarity=0.265 Sum_probs=92.2
Q ss_pred cccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhh
Q psy7837 46 AFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINF 125 (299)
Q Consensus 46 ~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~ 125 (299)
+....|.....+...+. +.++.+|||+|||+|+.+..+++.+++.++++++|+++.+++.+++++...
T Consensus 41 ~~~~~~~~~~~l~~l~~--~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~---------- 108 (239)
T 2hnk_A 41 NMQISPEEGQFLNILTK--ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKEN---------- 108 (239)
T ss_dssp CCSCCHHHHHHHHHHHH--HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT----------
T ss_pred ccccCHHHHHHHHHHHH--hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc----------
Confidence 34566666555555444 678899999999999999999998876678999999999999988888762
Q ss_pred hcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC-------
Q psy7837 126 YGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP------- 198 (299)
Q Consensus 126 ~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------- 198 (299)
+...++.++.+|+....+
T Consensus 109 -------------------------------------------------------g~~~~v~~~~~d~~~~~~~~~~~~~ 133 (239)
T 2hnk_A 109 -------------------------------------------------------GLENKIFLKLGSALETLQVLIDSKS 133 (239)
T ss_dssp -------------------------------------------------------TCGGGEEEEESCHHHHHHHHHHCSS
T ss_pred -------------------------------------------------------CCCCCEEEEECCHHHHHHHHHhhcc
Confidence 122347788887653211
Q ss_pred --------C-C-CCeeEEEecchhhhH---HHHHHHhccCCcEEEEEe
Q psy7837 199 --------D-A-APYDVIYISQAIRDI---PWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 199 --------~-~-~~fD~v~~~~~~~~~---~~~~~~~L~~gG~lv~~~ 233 (299)
+ . ++||+|+++...... .+.+.++|+|||++++..
T Consensus 134 ~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 134 APSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp CCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 2 679999999877644 478999999999999975
No 120
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.43 E-value=1.1e-12 Score=110.68 Aligned_cols=112 Identities=18% Similarity=0.222 Sum_probs=87.5
Q ss_pred HHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEE
Q psy7837 58 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLD 137 (299)
Q Consensus 58 ~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLD 137 (299)
++.+.+.+.+|++|||+|||+|+++..+++. ++..+++++|+++..++.|++++...
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~---------------------- 68 (244)
T 3gnl_A 12 LEKVASYITKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSS---------------------- 68 (244)
T ss_dssp HHHHHTTCCSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHhCCCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHc----------------------
Confidence 4455666889999999999999999999876 44567888888888888888887762
Q ss_pred EcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecch----hh
Q psy7837 138 IGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQA----IR 213 (299)
Q Consensus 138 iG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~----~~ 213 (299)
+...++++..+|......+..+||+|++.+. +.
T Consensus 69 -------------------------------------------gl~~~I~v~~gD~l~~~~~~~~~D~IviagmGg~lI~ 105 (244)
T 3gnl_A 69 -------------------------------------------GLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGGTLIR 105 (244)
T ss_dssp -------------------------------------------TCTTTEEEEECSGGGGCCGGGCCCEEEEEEECHHHHH
T ss_pred -------------------------------------------CCCceEEEEecchhhccCccccccEEEEeCCchHHHH
Confidence 3445799999999876654346999876543 55
Q ss_pred hHHHHHHHhccCCcEEEEEecC
Q psy7837 214 DIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 214 ~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
.+.+.....|+++++|+++-..
T Consensus 106 ~IL~~~~~~L~~~~~lIlq~~~ 127 (244)
T 3gnl_A 106 TILEEGAAKLAGVTKLILQPNI 127 (244)
T ss_dssp HHHHHTGGGGTTCCEEEEEESS
T ss_pred HHHHHHHHHhCCCCEEEEEcCC
Confidence 6777888999999999998654
No 121
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.43 E-value=4.2e-13 Score=117.83 Aligned_cols=105 Identities=17% Similarity=0.079 Sum_probs=87.3
Q ss_pred cccCCCCeEEEEcCCCcHHHHHHH--Hc-CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCe
Q psy7837 127 GHLVYGSKVLDIGSGSGYLSALFA--YM-GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPY 203 (299)
Q Consensus 127 ~~~~~~~~vLDiG~G~G~~~~~la--~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 203 (299)
..+.++.+|||+|||+|.++..++ .. +.+|+++|+++.+++.+++++... +...+++++++|+.....+ ++|
T Consensus 114 ~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~~-~~f 188 (305)
T 3ocj_A 114 RHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGH----ALAGQITLHRQDAWKLDTR-EGY 188 (305)
T ss_dssp HHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTS----TTGGGEEEEECCGGGCCCC-SCE
T ss_pred hhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhc----CCCCceEEEECchhcCCcc-CCe
Confidence 346788999999999999999985 22 678999999999999999998763 2344699999999876555 889
Q ss_pred eEEEecchhhh---------HHHHHHHhccCCcEEEEEecCC
Q psy7837 204 DVIYISQAIRD---------IPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 204 D~v~~~~~~~~---------~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
|+|+++.++++ +.+++.++|+|||++++.....
T Consensus 189 D~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 189 DLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp EEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred EEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 99999887754 3578899999999999987554
No 122
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.43 E-value=2.7e-13 Score=114.79 Aligned_cols=101 Identities=17% Similarity=0.183 Sum_probs=82.9
Q ss_pred hhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC--CCCCCC
Q psy7837 125 FYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG--YPDAAP 202 (299)
Q Consensus 125 ~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~ 202 (299)
.+..+.++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.++++ +.++.+|.... ....++
T Consensus 35 ~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-------------~~~~~~d~~~~~~~~~~~~ 101 (240)
T 3dli_A 35 YIPYFKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK-------------FNVVKSDAIEYLKSLPDKY 101 (240)
T ss_dssp GGGGTTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT-------------SEEECSCHHHHHHTSCTTC
T ss_pred HHhhhcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh-------------cceeeccHHHHhhhcCCCC
Confidence 344467789999999999999999999999999999999999988652 67888887652 334478
Q ss_pred eeEEEecchhhhH--------HHHHHHhccCCcEEEEEecCCCC
Q psy7837 203 YDVIYISQAIRDI--------PWHIVDQLKLGGRMLFIKGHEDD 238 (299)
Q Consensus 203 fD~v~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~~~~~ 238 (299)
||+|++..+++++ .+++.++|||||.+++..+....
T Consensus 102 fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 145 (240)
T 3dli_A 102 LDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTS 145 (240)
T ss_dssp BSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTS
T ss_pred eeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcch
Confidence 9999999887654 35889999999999999877543
No 123
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.43 E-value=1.3e-12 Score=113.61 Aligned_cols=101 Identities=21% Similarity=0.234 Sum_probs=83.8
Q ss_pred CCCeEEEEcCCCcHHHHHHHHc-CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCe---eEE
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYM-GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPY---DVI 206 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f---D~v 206 (299)
++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++|++.+ +...+++++++|+..... ++| |+|
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~----~l~~~v~~~~~D~~~~~~--~~f~~~D~I 196 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERH----GVSDRFFVRKGEFLEPFK--EKFASIEMI 196 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHT----TCTTSEEEEESSTTGGGG--GGTTTCCEE
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc----CCCCceEEEECcchhhcc--cccCCCCEE
Confidence 4679999999999999999988 789999999999999999999883 233459999999987433 468 999
Q ss_pred Eecchhh-------------------------hHHHHHH-HhccCCcEEEEEecCCC
Q psy7837 207 YISQAIR-------------------------DIPWHIV-DQLKLGGRMLFIKGHED 237 (299)
Q Consensus 207 ~~~~~~~-------------------------~~~~~~~-~~L~~gG~lv~~~~~~~ 237 (299)
+++++.. .+.+++. +.|+|||.+++..+...
T Consensus 197 vsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q 253 (284)
T 1nv8_A 197 LSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQ 253 (284)
T ss_dssp EECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTC
T ss_pred EEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchH
Confidence 9985432 3557888 99999999999877654
No 124
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.42 E-value=9.6e-13 Score=118.94 Aligned_cols=110 Identities=26% Similarity=0.247 Sum_probs=89.3
Q ss_pred HHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC
Q psy7837 118 TYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG 196 (299)
Q Consensus 118 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 196 (299)
.+.+.+.......++.+|||+|||+|.++..+++.|. +|+++|.+ .+++.++++++.+ +...+++++.+|+...
T Consensus 50 ~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~ 124 (376)
T 3r0q_C 50 AYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKAN----NLDHIVEVIEGSVEDI 124 (376)
T ss_dssp HHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHT----TCTTTEEEEESCGGGC
T ss_pred HHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHc----CCCCeEEEEECchhhc
Confidence 3445555556678899999999999999999999987 89999999 9999999999874 3456799999999875
Q ss_pred CCCCCCeeEEEecchh---------hhHHHHHHHhccCCcEEEEEe
Q psy7837 197 YPDAAPYDVIYISQAI---------RDIPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 197 ~~~~~~fD~v~~~~~~---------~~~~~~~~~~L~~gG~lv~~~ 233 (299)
..+ ++||+|+++... ..+..++.++|+|||.+++..
T Consensus 125 ~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 125 SLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp CCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred CcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 544 789999996532 235567889999999997753
No 125
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.42 E-value=7.7e-13 Score=110.65 Aligned_cols=116 Identities=13% Similarity=0.158 Sum_probs=87.9
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCe
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSK 134 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 134 (299)
..++..+.. ..++.+|||+|||+|+.+..+++.+++.++++++|+++.+++.+++++...
T Consensus 47 ~~~l~~l~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------- 106 (221)
T 3u81_A 47 GQIMDAVIR-EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFA------------------- 106 (221)
T ss_dssp HHHHHHHHH-HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH-------------------
T ss_pred HHHHHHHHH-hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHc-------------------
Confidence 444444442 567899999999999999999998776788999999999999888888762
Q ss_pred EEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC---C---CCCCeeEEEe
Q psy7837 135 VLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY---P---DAAPYDVIYI 208 (299)
Q Consensus 135 vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~---~~~~fD~v~~ 208 (299)
+...+++++.+|+.... . ..++||+|++
T Consensus 107 ----------------------------------------------~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~ 140 (221)
T 3u81_A 107 ----------------------------------------------GLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFL 140 (221)
T ss_dssp ----------------------------------------------TCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEEE
T ss_pred ----------------------------------------------CCCCceEEEECCHHHHHHHHHHhcCCCceEEEEE
Confidence 23457999999975321 1 1157999999
Q ss_pred cchhhhHHH------HHHHhccCCcEEEEEecCCC
Q psy7837 209 SQAIRDIPW------HIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 209 ~~~~~~~~~------~~~~~L~~gG~lv~~~~~~~ 237 (299)
+....+... .+ ++|+|||++++......
T Consensus 141 d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~ 174 (221)
T 3u81_A 141 DHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVP 174 (221)
T ss_dssp CSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCC
T ss_pred cCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCc
Confidence 987765542 23 89999999999765543
No 126
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.42 E-value=6.8e-13 Score=111.81 Aligned_cols=120 Identities=23% Similarity=0.252 Sum_probs=93.5
Q ss_pred cccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhh
Q psy7837 46 AFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINF 125 (299)
Q Consensus 46 ~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~ 125 (299)
..+..|.....+...+. ..++.+|||+|||+|+.+..+++..+ .++++++|+++.+++.+++++...
T Consensus 35 ~~~~~~~~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~---------- 101 (233)
T 2gpy_A 35 VPIMDLLGMESLLHLLK--MAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKAL---------- 101 (233)
T ss_dssp CCCCCHHHHHHHHHHHH--HHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHT----------
T ss_pred CCCcCHHHHHHHHHHHh--ccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc----------
Confidence 34556666655655554 67889999999999999999998864 578999999998888888887762
Q ss_pred hcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCC---CCC
Q psy7837 126 YGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPD---AAP 202 (299)
Q Consensus 126 ~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~ 202 (299)
+...++.++.+|+....+. .++
T Consensus 102 -------------------------------------------------------~~~~~v~~~~~d~~~~~~~~~~~~~ 126 (233)
T 2gpy_A 102 -------------------------------------------------------GLESRIELLFGDALQLGEKLELYPL 126 (233)
T ss_dssp -------------------------------------------------------TCTTTEEEECSCGGGSHHHHTTSCC
T ss_pred -------------------------------------------------------CCCCcEEEEECCHHHHHHhcccCCC
Confidence 2335799999998763221 367
Q ss_pred eeEEEecchhh---hHHHHHHHhccCCcEEEEEe
Q psy7837 203 YDVIYISQAIR---DIPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 203 fD~v~~~~~~~---~~~~~~~~~L~~gG~lv~~~ 233 (299)
||+|+++.+.. .+.+.+.++|+|||++++..
T Consensus 127 fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 127 FDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred ccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 99999998874 45578999999999999974
No 127
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.42 E-value=1.8e-12 Score=109.16 Aligned_cols=98 Identities=23% Similarity=0.227 Sum_probs=81.6
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc-C-CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCC----CCCCCC
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM-G-AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRR----GYPDAA 201 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~-~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~----~~~~~~ 201 (299)
.+.++.+|||+|||+|.++..+++. + .+|+++|+++.+++.++++++. . .++.++.+|+.. .... +
T Consensus 71 ~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~-----~--~~v~~~~~d~~~~~~~~~~~-~ 142 (230)
T 1fbn_A 71 PIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE-----R--ENIIPILGDANKPQEYANIV-E 142 (230)
T ss_dssp CCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT-----C--TTEEEEECCTTCGGGGTTTS-C
T ss_pred CCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc-----C--CCeEEEECCCCCcccccccC-c
Confidence 4567899999999999999999987 4 7899999999999999998765 2 689999999876 3333 6
Q ss_pred CeeEEEecchh----hhHHHHHHHhccCCcEEEEEe
Q psy7837 202 PYDVIYISQAI----RDIPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 202 ~fD~v~~~~~~----~~~~~~~~~~L~~gG~lv~~~ 233 (299)
+||+|+.+..- ..+.+++.++|+|||++++..
T Consensus 143 ~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 178 (230)
T 1fbn_A 143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI 178 (230)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEEE
Confidence 89999976433 345789999999999999974
No 128
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.42 E-value=1.2e-13 Score=117.44 Aligned_cols=114 Identities=16% Similarity=0.158 Sum_probs=90.0
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCe
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSK 134 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 134 (299)
..++..+.. ..++.+|||+|||+|+.+..+++.+++.++++++|+++.+++.+++++...
T Consensus 49 ~~~l~~l~~-~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~------------------- 108 (242)
T 3r3h_A 49 AQFMQMLIR-LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREA------------------- 108 (242)
T ss_dssp HHHHHHHHH-HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHT-------------------
T ss_pred HHHHHHHHh-hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------
Confidence 455555543 567789999999999999999998877789999999998888888887762
Q ss_pred EEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCC------CCCeeEEEe
Q psy7837 135 VLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPD------AAPYDVIYI 208 (299)
Q Consensus 135 vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~fD~v~~ 208 (299)
+...+++++.+|+...... .++||+|++
T Consensus 109 ----------------------------------------------g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~ 142 (242)
T 3r3h_A 109 ----------------------------------------------KQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFI 142 (242)
T ss_dssp ----------------------------------------------TCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEEE
T ss_pred ----------------------------------------------CCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEEE
Confidence 3446899999998653221 368999999
Q ss_pred cchhhh---HHHHHHHhccCCcEEEEEec
Q psy7837 209 SQAIRD---IPWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 209 ~~~~~~---~~~~~~~~L~~gG~lv~~~~ 234 (299)
+..... ..+++.++|+|||+|++...
T Consensus 143 d~~~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 143 DADKTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp ESCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred cCChHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 887654 45688999999999999643
No 129
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.41 E-value=1e-12 Score=111.02 Aligned_cols=107 Identities=13% Similarity=0.097 Sum_probs=82.6
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCC-cccCCCCeEEEEcCCCCCC---CCCCCe
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAP-AIALAENFEFVCADGRRGY---PDAAPY 203 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~v~~~~~d~~~~~---~~~~~f 203 (299)
.++.+|||||||+|.++..+++. +..|+|+|+++.+++.|+++++.... ......|+.++.+|+...+ ...++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 34678999999999999999987 56899999999999999987653000 0023568999999988632 345789
Q ss_pred eEEEecchhh--------------hHHHHHHHhccCCcEEEEEecCC
Q psy7837 204 DVIYISQAIR--------------DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 204 D~v~~~~~~~--------------~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
|.|++..+.. .+.+++.++|+|||.|++.+...
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~ 171 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVL 171 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCH
Confidence 9998875432 36678999999999999987653
No 130
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.41 E-value=1.4e-12 Score=110.28 Aligned_cols=100 Identities=22% Similarity=0.262 Sum_probs=83.2
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEe
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYI 208 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 208 (299)
+.++.+|||+|||+|.++..+++. .+++++|+++.+++.+++++... ..+++++.+|+...... ++||+|++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~d~~~~~~~-~~fD~v~~ 102 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMET------NRHVDFWVQDMRELELP-EPVDAITI 102 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHT------TCCCEEEECCGGGCCCS-SCEEEEEE
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhc------CCceEEEEcChhhcCCC-CCcCEEEE
Confidence 345789999999999999999988 89999999999999999998762 25799999998875444 78999998
Q ss_pred cc-hhhhH---------HHHHHHhccCCcEEEEEecCC
Q psy7837 209 SQ-AIRDI---------PWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 209 ~~-~~~~~---------~~~~~~~L~~gG~lv~~~~~~ 236 (299)
.. +++++ .+++.++|+|||.+++.+++.
T Consensus 103 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 140 (243)
T 3d2l_A 103 LCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSP 140 (243)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred eCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCH
Confidence 75 55433 357889999999999977543
No 131
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.41 E-value=1.6e-12 Score=111.45 Aligned_cols=95 Identities=18% Similarity=0.170 Sum_probs=79.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQ 210 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 210 (299)
++.+|||+|||+|.++..+++.+.+++++|+|+.+++.++++.. .+ ++.+|+.......++||+|++..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~---------~~--~~~~d~~~~~~~~~~fD~v~~~~ 122 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGV---------KN--VVEAKAEDLPFPSGAFEAVLALG 122 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTC---------SC--EEECCTTSCCSCTTCEEEEEECS
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcC---------CC--EEECcHHHCCCCCCCEEEEEEcc
Confidence 78899999999999999999999999999999999999988732 12 78899887555567899999987
Q ss_pred hhhh-------HHHHHHHhccCCcEEEEEecCC
Q psy7837 211 AIRD-------IPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 211 ~~~~-------~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
++.+ +.+++.++|+|||.+++..++.
T Consensus 123 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 123 DVLSYVENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp SHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred hhhhccccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 5543 3368899999999999987653
No 132
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.41 E-value=1.1e-12 Score=108.60 Aligned_cols=94 Identities=16% Similarity=0.204 Sum_probs=80.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEec
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYIS 209 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 209 (299)
++.+|||+|||+|.++..+ +. +++++|+++.+++.++++. .++.++.+|+.......++||+|++.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~fD~v~~~ 102 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA----------PEATWVRAWGEALPFPGESFDVVLLF 102 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC----------TTSEEECCCTTSCCSCSSCEEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC----------CCcEEEEcccccCCCCCCcEEEEEEc
Confidence 7889999999999999887 77 8999999999999998873 47889999988765555789999999
Q ss_pred chhhh------HHHHHHHhccCCcEEEEEecCCC
Q psy7837 210 QAIRD------IPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 210 ~~~~~------~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
.++++ +.+++.++|||||.+++..++..
T Consensus 103 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 103 TTLEFVEDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp SCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred ChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 88765 34689999999999999987664
No 133
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.41 E-value=2.3e-12 Score=103.77 Aligned_cols=102 Identities=18% Similarity=0.190 Sum_probs=83.7
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
...++.+|||+|||+|.++..+++.+.+++++|+++.+++.++++++. ....+++++.+|+.... +.++||+|+
T Consensus 32 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~-----~~~~~~~~~~~d~~~~~-~~~~~D~i~ 105 (183)
T 2yxd_A 32 NLNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAK-----FNIKNCQIIKGRAEDVL-DKLEFNKAF 105 (183)
T ss_dssp CCCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHH-----TTCCSEEEEESCHHHHG-GGCCCSEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHH-----cCCCcEEEEECCccccc-cCCCCcEEE
Confidence 456788999999999999999999888999999999999999999987 34468999999987633 336899999
Q ss_pred ecch--hhhHHHHHHHhccCCcEEEEEecCCC
Q psy7837 208 ISQA--IRDIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 208 ~~~~--~~~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
++.+ ...+.+++.++ |||.+++......
T Consensus 106 ~~~~~~~~~~l~~~~~~--~gG~l~~~~~~~~ 135 (183)
T 2yxd_A 106 IGGTKNIEKIIEILDKK--KINHIVANTIVLE 135 (183)
T ss_dssp ECSCSCHHHHHHHHHHT--TCCEEEEEESCHH
T ss_pred ECCcccHHHHHHHHhhC--CCCEEEEEecccc
Confidence 9977 22344566666 9999999986543
No 134
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.41 E-value=2e-12 Score=111.86 Aligned_cols=101 Identities=18% Similarity=0.288 Sum_probs=83.6
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
.++.+|||+|||+|.++..++.. +.+|+++|+|+.+++.++++++. ....+++++++|+..... .++||+|+
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~-----~~~~~v~~~~~d~~~~~~-~~~fD~Iv 181 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQH-----LAIKNIHILQSDWFSALA-GQQFAMIV 181 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHH-----HTCCSEEEECCSTTGGGT-TCCEEEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH-----cCCCceEEEEcchhhhcc-cCCccEEE
Confidence 45789999999999999999865 67899999999999999999987 344589999999886443 36799999
Q ss_pred ecchh-------------------------------hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 208 ISQAI-------------------------------RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 208 ~~~~~-------------------------------~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+++++ ..+.+.+.++|+|||.+++..+..
T Consensus 182 ~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 241 (276)
T 2b3t_A 182 SNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ 241 (276)
T ss_dssp ECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS
T ss_pred ECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch
Confidence 98543 234467889999999999987544
No 135
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.41 E-value=4e-13 Score=115.48 Aligned_cols=108 Identities=19% Similarity=0.183 Sum_probs=81.3
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCccc------------------------C
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIA------------------------L 182 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~------------------------~ 182 (299)
...++.+|||||||+|.++..++..+. +|+++|+|+.+++.++++++....... .
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 456788999999999999888888886 599999999999999988754210000 0
Q ss_pred CCCeE-EEEcCCCCCCC----CCCCeeEEEecchhhhH----------HHHHHHhccCCcEEEEEecC
Q psy7837 183 AENFE-FVCADGRRGYP----DAAPYDVIYISQAIRDI----------PWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 183 ~~~v~-~~~~d~~~~~~----~~~~fD~v~~~~~~~~~----------~~~~~~~L~~gG~lv~~~~~ 235 (299)
..++. ++++|+....+ ..++||+|++..+++++ .+++.++|||||.|++....
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 11243 88999886321 24689999999888764 25788999999999998643
No 136
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.41 E-value=1e-12 Score=112.48 Aligned_cols=100 Identities=24% Similarity=0.307 Sum_probs=83.7
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEe
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYI 208 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 208 (299)
+.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++++.+ ... +++..+|..... +.++||+|++
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~-----~~~-v~~~~~d~~~~~-~~~~fD~Vv~ 190 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRN-----GVR-PRFLEGSLEAAL-PFGPFDLLVA 190 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT-----TCC-CEEEESCHHHHG-GGCCEEEEEE
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHc-----CCc-EEEEECChhhcC-cCCCCCEEEE
Confidence 356899999999999999999999999999999999999999999873 333 899999877533 2367999999
Q ss_pred cchhh---hHHHHHHHhccCCcEEEEEecC
Q psy7837 209 SQAIR---DIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 209 ~~~~~---~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
+...+ .+.+.+.++|+|||+++++...
T Consensus 191 n~~~~~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 191 NLYAELHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp ECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence 87554 3557889999999999997543
No 137
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.41 E-value=9e-13 Score=106.12 Aligned_cols=107 Identities=11% Similarity=0.084 Sum_probs=82.6
Q ss_pred HHHHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCC-CeEEEEcC
Q psy7837 116 AETYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAE-NFEFVCAD 192 (299)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~-~v~~~~~d 192 (299)
.+.++..+... +.+..+|||+|||+|.+++.++.. +.+|+++|+|+.+++.++++++.+ +.. ++++ .|
T Consensus 36 ld~fY~~~~~~--l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~-----g~~~~v~~--~d 106 (200)
T 3fzg_A 36 LNDFYTYVFGN--IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKL-----KTTIKYRF--LN 106 (200)
T ss_dssp HHHHHHHHHHH--SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHS-----CCSSEEEE--EC
T ss_pred HHHHHHHHHhh--cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhc-----CCCccEEE--ec
Confidence 44444443322 266889999999999999999877 679999999999999999999883 333 5655 66
Q ss_pred CCCCCCCCCCeeEEEecchhhhHHH------HHHHhccCCcEEEEE
Q psy7837 193 GRRGYPDAAPYDVIYISQAIRDIPW------HIVDQLKLGGRMLFI 232 (299)
Q Consensus 193 ~~~~~~~~~~fD~v~~~~~~~~~~~------~~~~~L~~gG~lv~~ 232 (299)
..... ..++||+|++...++.+.+ ++.+.|+|||.++-.
T Consensus 107 ~~~~~-~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 107 KESDV-YKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp CHHHH-TTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEE
T ss_pred ccccC-CCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEe
Confidence 65443 3377999999999998853 789999999876654
No 138
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.40 E-value=2e-12 Score=114.72 Aligned_cols=104 Identities=19% Similarity=0.205 Sum_probs=82.9
Q ss_pred HHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCC
Q psy7837 122 RINFYGHLVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDA 200 (299)
Q Consensus 122 ~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 200 (299)
.+.......++.+|||+|||+|.++..+++.+. +|+++|.+ .+++.++++++.+ +...+++++.+|+.....+.
T Consensus 29 ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~----~~~~~i~~~~~d~~~~~~~~ 103 (328)
T 1g6q_1 29 AIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELN----GFSDKITLLRGKLEDVHLPF 103 (328)
T ss_dssp HHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHT----TCTTTEEEEESCTTTSCCSS
T ss_pred HHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHc----CCCCCEEEEECchhhccCCC
Confidence 333334456789999999999999999999876 79999999 5999999998874 34567999999998755444
Q ss_pred CCeeEEEecchh---------hhHHHHHHHhccCCcEEE
Q psy7837 201 APYDVIYISQAI---------RDIPWHIVDQLKLGGRML 230 (299)
Q Consensus 201 ~~fD~v~~~~~~---------~~~~~~~~~~L~~gG~lv 230 (299)
++||+|++.... ..+..++.++|+|||.++
T Consensus 104 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred CcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 789999987431 234567789999999997
No 139
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.40 E-value=1.4e-12 Score=114.36 Aligned_cols=102 Identities=18% Similarity=0.168 Sum_probs=78.0
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc-CCeEEEEeCChHHHHHHHHHHHhcCCcccCCC------CeEEEEcCCCCC------
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM-GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAE------NFEFVCADGRRG------ 196 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~------~v~~~~~d~~~~------ 196 (299)
.++.+|||+|||+|..+..++.. +.+|+|+|+|+.+++.|+++.... ... ++++.+.|+...
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~-----~~~~~~~~~~~~f~~~d~~~d~~~~~l 121 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKL-----NSGIKTKYYKFDYIQETIRSDTFVSSV 121 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHH-----CC----CCCEEEEEECCTTSSSHHHHH
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhc-----cccccccccccchhhhhcccchhhhhh
Confidence 35789999999999877666655 578999999999999999987652 211 367888887311
Q ss_pred --CCCCCCeeEEEecchhh---------hHHHHHHHhccCCcEEEEEecCC
Q psy7837 197 --YPDAAPYDVIYISQAIR---------DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 197 --~~~~~~fD~v~~~~~~~---------~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
....++||+|++..+++ .+.+++.++|||||++++.+++.
T Consensus 122 ~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 122 REVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp HTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred hccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 12346899999887664 24568999999999999988764
No 140
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.40 E-value=2.6e-12 Score=117.19 Aligned_cols=128 Identities=17% Similarity=0.191 Sum_probs=93.6
Q ss_pred cccccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHH
Q psy7837 42 IGHNAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIK 121 (299)
Q Consensus 42 ~~~~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~ 121 (299)
..+|+.. |.....+++.+. +++|++|||+|||+|+++..+++..+. .+++|+|+++.+++.|...+..
T Consensus 221 ~~yGet~--p~~v~~ml~~l~--l~~g~~VLDLGCGsG~la~~LA~~~g~-~~V~GVDis~~~l~~A~~Ml~~------- 288 (433)
T 1u2z_A 221 YVYGELL--PNFLSDVYQQCQ--LKKGDTFMDLGSGVGNCVVQAALECGC-ALSFGCEIMDDASDLTILQYEE------- 288 (433)
T ss_dssp GCCCCBC--HHHHHHHHHHTT--CCTTCEEEEESCTTSHHHHHHHHHHCC-SEEEEEECCHHHHHHHHHHHHH-------
T ss_pred ccccccc--HHHHHHHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHhHHH-------
Confidence 3445443 777888888776 889999999999999999999998753 5799999999999888444332
Q ss_pred HHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccC--CCCeEEEEcCCCCC-CC
Q psy7837 122 RINFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIAL--AENFEFVCADGRRG-YP 198 (299)
Q Consensus 122 ~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~--~~~v~~~~~d~~~~-~~ 198 (299)
++++++. .+ ..+++++++|.... ..
T Consensus 289 -----------------------------------------------ar~~~~~-----~Gl~~~nV~~i~gD~~~~~~~ 316 (433)
T 1u2z_A 289 -----------------------------------------------LKKRCKL-----YGMRLNNVEFSLKKSFVDNNR 316 (433)
T ss_dssp -----------------------------------------------HHHHHHH-----TTBCCCCEEEEESSCSTTCHH
T ss_pred -----------------------------------------------HHHHHHH-----cCCCCCceEEEEcCccccccc
Confidence 3334333 23 46899999865532 11
Q ss_pred ---CCCCeeEEEecchh-----hhHHHHHHHhccCCcEEEEEe
Q psy7837 199 ---DAAPYDVIYISQAI-----RDIPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 199 ---~~~~fD~v~~~~~~-----~~~~~~~~~~L~~gG~lv~~~ 233 (299)
..++||+|+++..+ .....++.++|||||++++..
T Consensus 317 ~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 317 VAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp HHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred cccccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEee
Confidence 13679999997544 223368999999999999974
No 141
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.40 E-value=1.1e-12 Score=113.43 Aligned_cols=106 Identities=17% Similarity=0.189 Sum_probs=85.4
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCcH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSGY 144 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~ 144 (299)
+++|++|||+|||+|..+..+++.+...++++++|+++.+++.+++++..
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~------------------------------ 130 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINR------------------------------ 130 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHH------------------------------
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHH------------------------------
Confidence 78999999999999999999999876567899999988888888888776
Q ss_pred HHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC----CCCCeeEEEecchh--------
Q psy7837 145 LSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP----DAAPYDVIYISQAI-------- 212 (299)
Q Consensus 145 ~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD~v~~~~~~-------- 212 (299)
.+..+++++.+|+..... ..++||+|+++.+.
T Consensus 131 ------------------------------------~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~ 174 (274)
T 3ajd_A 131 ------------------------------------MGVLNTIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDK 174 (274)
T ss_dssp ------------------------------------TTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEEECCC-------
T ss_pred ------------------------------------hCCCcEEEEeCChHhcchhhhhccccCCEEEEcCCCCCCccccc
Confidence 345589999999875322 13679999998543
Q ss_pred ----------------hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 213 ----------------RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 213 ----------------~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
..+.+++.++|||||++++++...
T Consensus 175 ~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 175 NRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp -----HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 235567889999999999987554
No 142
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.40 E-value=9.1e-13 Score=116.96 Aligned_cols=102 Identities=20% Similarity=0.135 Sum_probs=83.2
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCC--CeEEEEcCCCCCCCC----CCCe
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAE--NFEFVCADGRRGYPD----AAPY 203 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~--~v~~~~~d~~~~~~~----~~~f 203 (299)
.++.+|||+|||+|.+++.+++.+++|+++|+|+.+++.+++|++.+ ... +++++++|+...... .++|
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~-----gl~~~~v~~i~~D~~~~l~~~~~~~~~f 226 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLA-----GLEQAPIRWICEDAMKFIQREERRGSTY 226 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHH-----TCTTSCEEEECSCHHHHHHHHHHHTCCB
T ss_pred CCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHc-----CCCccceEEEECcHHHHHHHHHhcCCCc
Confidence 35789999999999999999999999999999999999999999874 333 499999998753321 3579
Q ss_pred eEEEecchh----------------hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 204 DVIYISQAI----------------RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 204 D~v~~~~~~----------------~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
|+|+++++. ..+.+.+.++|+|||.+++.....
T Consensus 227 D~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 227 DIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp SEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred eEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 999998762 234567889999999988776544
No 143
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.40 E-value=7.8e-13 Score=112.66 Aligned_cols=114 Identities=18% Similarity=0.278 Sum_probs=89.3
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCC
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGS 133 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 133 (299)
...++..+.. ..++.+|||+|||+|+.+..+++.+++.++++++|+++.+++.+++++...
T Consensus 67 ~~~ll~~l~~-~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~------------------ 127 (247)
T 1sui_A 67 EGQFLSMLLK-LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKA------------------ 127 (247)
T ss_dssp HHHHHHHHHH-HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHT------------------
T ss_pred HHHHHHHHHH-hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------------------
Confidence 3555555543 567789999999999999999998876789999999999999988888762
Q ss_pred eEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC-------CCCCeeEE
Q psy7837 134 KVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP-------DAAPYDVI 206 (299)
Q Consensus 134 ~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~~fD~v 206 (299)
+...+++++.+|+....+ ..++||+|
T Consensus 128 -----------------------------------------------g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V 160 (247)
T 1sui_A 128 -----------------------------------------------GVDHKIDFREGPALPVLDEMIKDEKNHGSYDFI 160 (247)
T ss_dssp -----------------------------------------------TCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEE
T ss_pred -----------------------------------------------CCCCCeEEEECCHHHHHHHHHhccCCCCCEEEE
Confidence 233579999999864321 13679999
Q ss_pred Eecchhh---hHHHHHHHhccCCcEEEEEe
Q psy7837 207 YISQAIR---DIPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 207 ~~~~~~~---~~~~~~~~~L~~gG~lv~~~ 233 (299)
+++.... ...+.+.++|+|||.+++..
T Consensus 161 ~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 161 FVDADKDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence 9987643 45578999999999999864
No 144
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.40 E-value=1.6e-12 Score=117.73 Aligned_cols=106 Identities=21% Similarity=0.198 Sum_probs=85.7
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHHHHhcCCcc---cCCCCeEEEEcCCCCC------
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKNIRRGAPAI---ALAENFEFVCADGRRG------ 196 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~---~~~~~v~~~~~d~~~~------ 196 (299)
..++.+|||+|||+|.++..+++. +.+|+++|+++.+++.++++++...... ....+++++++|+...
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 567899999999999999999875 5689999999999999999876520000 1126899999999864
Q ss_pred CCCCCCeeEEEecchhhh------HHHHHHHhccCCcEEEEEec
Q psy7837 197 YPDAAPYDVIYISQAIRD------IPWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 197 ~~~~~~fD~v~~~~~~~~------~~~~~~~~L~~gG~lv~~~~ 234 (299)
..+.++||+|+++.++++ +.+++.++|||||++++...
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 445578999999998865 44789999999999999754
No 145
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.39 E-value=4.3e-12 Score=103.17 Aligned_cols=99 Identities=20% Similarity=0.252 Sum_probs=82.8
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEe
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYI 208 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 208 (299)
+.++.+|||+|||+|.++..+++.+.+++++|+++.+++.+++++ .++.++.+|+.......++||+|++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~~D~i~~ 113 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDF----------PEARWVVGDLSVDQISETDFDLIVS 113 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----------TTSEEEECCTTTSCCCCCCEEEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhC----------CCCcEEEcccccCCCCCCceeEEEE
Confidence 357889999999999999999999999999999999999998863 3588999998875444578999999
Q ss_pred c-chhh--------hHHHHHHHhccCCcEEEEEecCCC
Q psy7837 209 S-QAIR--------DIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 209 ~-~~~~--------~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
+ ..++ .+.+++.++|+|||.+++..+...
T Consensus 114 ~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~ 151 (195)
T 3cgg_A 114 AGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR 151 (195)
T ss_dssp CCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred CCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC
Confidence 8 4443 344688999999999999887653
No 146
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.39 E-value=1.1e-12 Score=111.87 Aligned_cols=102 Identities=18% Similarity=0.119 Sum_probs=78.5
Q ss_pred CCCeEEEEcCCCcHHHHHHHHc----CCeEEEEeCChHHHHHHHHHHHhcCCcccCCC-C--------------------
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYM----GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAE-N-------------------- 185 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~----~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~-~-------------------- 185 (299)
++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++++..+... ... +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPA--GLTARELERREQSERFGKPSYLEAA 128 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHH--HHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhc--cccccchhhhhhhhhcccccchhhh
Confidence 5679999999999999999876 568999999999999999987652000 111 1
Q ss_pred -----eE-------------EEEcCCCCCCC-----CCCCeeEEEecchhh---------------hHHHHHHHhccCCc
Q psy7837 186 -----FE-------------FVCADGRRGYP-----DAAPYDVIYISQAIR---------------DIPWHIVDQLKLGG 227 (299)
Q Consensus 186 -----v~-------------~~~~d~~~~~~-----~~~~fD~v~~~~~~~---------------~~~~~~~~~L~~gG 227 (299)
++ ++++|+..... ...+||+|+++.++. .+.+++.++|+|||
T Consensus 129 ~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 208 (250)
T 1o9g_A 129 QAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHA 208 (250)
T ss_dssp HHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTC
T ss_pred hhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCc
Confidence 56 99999876442 334799999987542 45578899999999
Q ss_pred EEEEEec
Q psy7837 228 RMLFIKG 234 (299)
Q Consensus 228 ~lv~~~~ 234 (299)
++++...
T Consensus 209 ~l~~~~~ 215 (250)
T 1o9g_A 209 VIAVTDR 215 (250)
T ss_dssp EEEEEES
T ss_pred EEEEeCc
Confidence 9999443
No 147
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.39 E-value=5.8e-14 Score=118.95 Aligned_cols=98 Identities=22% Similarity=0.182 Sum_probs=83.3
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCC-CCeEEEEcCCCCCCCCCCCeeEEEe
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALA-ENFEFVCADGRRGYPDAAPYDVIYI 208 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~v~~ 208 (299)
.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++++.+ .. .+++++++|+.... ..++||+|++
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~~~d~~~~~-~~~~~D~v~~ 150 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVY-----GIADKIEFICGDFLLLA-SFLKADVVFL 150 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCGGGEEEEESCHHHHG-GGCCCSEEEE
T ss_pred cCCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHc-----CCCcCeEEEECChHHhc-ccCCCCEEEE
Confidence 47899999999999999999999999999999999999999999873 33 58999999988644 3468999999
Q ss_pred cchhhhHH------HHHHHhccCCcEEEEEe
Q psy7837 209 SQAIRDIP------WHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 209 ~~~~~~~~------~~~~~~L~~gG~lv~~~ 233 (299)
+.++++.. .++.++|+|||.+++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 151 SPPWGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp CCCCSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CCCcCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 99876544 25788999999877654
No 148
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.39 E-value=8e-13 Score=112.08 Aligned_cols=101 Identities=17% Similarity=0.165 Sum_probs=82.7
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCC-----CCC
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPD-----AAP 202 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-----~~~ 202 (299)
.+.++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.+++++. ..+++++++|+...... ..+
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~ 124 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENT--------AANISYRLLDGLVPEQAAQIHSEIG 124 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSC--------CTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCc--------ccCceEEECcccccccccccccccC
Confidence 45778999999999999999999998899999999999999999852 34899999998763221 134
Q ss_pred eeEEEecchhhh--------HHHHHHHhccCCcEEEEEecCC
Q psy7837 203 YDVIYISQAIRD--------IPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 203 fD~v~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
||+|++..++++ +.+++.++|||||++++.....
T Consensus 125 ~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 125 DANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp SCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred ccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 899999887654 3458999999999988876543
No 149
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.39 E-value=8.6e-14 Score=115.26 Aligned_cols=100 Identities=25% Similarity=0.340 Sum_probs=64.1
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCC----CCCe
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPD----AAPY 203 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~----~~~f 203 (299)
.++.+|||+|||+|.++..+++. +.+++++|+++.+++.+++++..+ .. +++++++|+...... .++|
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~-~~~~~~~d~~~~~~~~~~~~~~f 102 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERF-----GA-VVDWAAADGIEWLIERAERGRPW 102 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------------CCHHHHHHHHHHHHHTTCCB
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh-----CC-ceEEEEcchHhhhhhhhhccCcc
Confidence 67889999999999999999988 568999999999999999998762 33 788899988763221 2789
Q ss_pred eEEEecchh--------------------------------hhHHHHHHHhccCCcE-EEEEecC
Q psy7837 204 DVIYISQAI--------------------------------RDIPWHIVDQLKLGGR-MLFIKGH 235 (299)
Q Consensus 204 D~v~~~~~~--------------------------------~~~~~~~~~~L~~gG~-lv~~~~~ 235 (299)
|+|+++.++ ..+.+++.++|+|||+ +++..+.
T Consensus 103 D~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 167 (215)
T 4dzr_A 103 HAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH 167 (215)
T ss_dssp SEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT
T ss_pred cEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC
Confidence 999997654 2333467789999999 6665553
No 150
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.38 E-value=2.4e-12 Score=115.62 Aligned_cols=123 Identities=15% Similarity=0.110 Sum_probs=90.7
Q ss_pred cchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccC
Q psy7837 51 PSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLV 130 (299)
Q Consensus 51 p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 130 (299)
+.....+++.+. +++|++|||+|||+|.++..++...+. .+++|+|+++.+++.|+++...
T Consensus 159 ~~~i~~il~~l~--l~~gd~VLDLGCGtG~l~l~lA~~~g~-~kVvGIDiS~~~lelAr~n~e~---------------- 219 (438)
T 3uwp_A 159 FDLVAQMIDEIK--MTDDDLFVDLGSGVGQVVLQVAAATNC-KHHYGVEKADIPAKYAETMDRE---------------- 219 (438)
T ss_dssp HHHHHHHHHHHC--CCTTCEEEEESCTTSHHHHHHHHHCCC-SEEEEEECCHHHHHHHHHHHHH----------------
T ss_pred HHHHHHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHH----------------
Confidence 445567777765 899999999999999999999987643 4799999999999998887654
Q ss_pred CCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccC-CCCeEEEEcCCCCCCCCC--CCeeEEE
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIAL-AENFEFVCADGRRGYPDA--APYDVIY 207 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~--~~fD~v~ 207 (299)
++++++.+ +. ..+++|+++|+....... ..||+|+
T Consensus 220 --------------------------------------frkr~~~~----Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf 257 (438)
T 3uwp_A 220 --------------------------------------FRKWMKWY----GKKHAEYTLERGDFLSEEWRERIANTSVIF 257 (438)
T ss_dssp --------------------------------------HHHHHHHH----TBCCCEEEEEECCTTSHHHHHHHHTCSEEE
T ss_pred --------------------------------------HHHHHHHh----CCCCCCeEEEECcccCCccccccCCccEEE
Confidence 11112211 12 368999999998643321 3699999
Q ss_pred ecchhh-----hHHHHHHHhccCCcEEEEEec
Q psy7837 208 ISQAIR-----DIPWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 208 ~~~~~~-----~~~~~~~~~L~~gG~lv~~~~ 234 (299)
+++.+. ....++.+.|||||+|++...
T Consensus 258 ~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 258 VNNFAFGPEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp ECCTTCCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred EcccccCchHHHHHHHHHHcCCCCcEEEEeec
Confidence 987642 233578899999999998743
No 151
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.38 E-value=7e-13 Score=106.01 Aligned_cols=96 Identities=17% Similarity=0.236 Sum_probs=81.1
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
...++.+|||+|||+|.++..+++.+.+++++|+++.+++.++++ ..++++..+| . ....++||+|+
T Consensus 14 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----------~~~v~~~~~d--~-~~~~~~~D~v~ 80 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK----------FDSVITLSDP--K-EIPDNSVDFIL 80 (170)
T ss_dssp HSSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH----------CTTSEEESSG--G-GSCTTCEEEEE
T ss_pred CcCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh----------CCCcEEEeCC--C-CCCCCceEEEE
Confidence 356788999999999999999999877999999999999999887 2478899998 2 23347899999
Q ss_pred ecchhhhH------HHHHHHhccCCcEEEEEecCC
Q psy7837 208 ISQAIRDI------PWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 208 ~~~~~~~~------~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+..+++++ .+++.++|+|||++++.....
T Consensus 81 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 81 FANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp EESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred EccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 99988654 578999999999999986544
No 152
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.38 E-value=2.2e-12 Score=111.17 Aligned_cols=100 Identities=23% Similarity=0.172 Sum_probs=85.6
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcC-CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMG-AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
..+|.+|||+|||+|.+++.+++.| .+|+++|+|+.+++.+++|++.| ....+++++++|+..... .+.||.|+
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N----~v~~~v~~~~~D~~~~~~-~~~~D~Vi 197 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLN----KVEDRMSAYNMDNRDFPG-ENIADRIL 197 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHT----TCTTTEEEECSCTTTCCC-CSCEEEEE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHc----CCCCcEEEEeCcHHHhcc-ccCCCEEE
Confidence 5789999999999999999999987 57999999999999999999986 456779999999987544 47899999
Q ss_pred ecchh--hhHHHHHHHhccCCcEEEEEe
Q psy7837 208 ISQAI--RDIPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 208 ~~~~~--~~~~~~~~~~L~~gG~lv~~~ 233 (299)
++.+. ....+.+.++|++||+|.+..
T Consensus 198 ~~~p~~~~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 198 MGYVVRTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp ECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCcHHHHHHHHHHHcCCCCEEEEEe
Confidence 98764 345678889999999987653
No 153
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.38 E-value=1.2e-12 Score=119.94 Aligned_cols=125 Identities=20% Similarity=0.209 Sum_probs=95.7
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEe
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYI 208 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 208 (299)
..++.+|||+|||+|.+++.+++.+.+|+++|+++.+++.|++|++.+ ... ++++.+|+...... +||+|++
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~n-----gl~-v~~~~~d~~~~~~~--~fD~Vv~ 359 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEIN-----NVD-AEFEVASDREVSVK--GFDTVIV 359 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----TCC-EEEEECCTTTCCCT--TCSEEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHc-----CCc-EEEEECChHHcCcc--CCCEEEE
Confidence 456889999999999999999999999999999999999999999873 444 99999999875443 7999999
Q ss_pred cchhhh----HHHHHHHhccCCcEEEEEecCCCCcceeeeEEeecCCceEEEEecceeccccccc
Q psy7837 209 SQAIRD----IPWHIVDQLKLGGRMLFIKGHEDDIMTLELLDKFVNGSVKTTVIHPHVYIHELKS 269 (299)
Q Consensus 209 ~~~~~~----~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (299)
+++... +.+.+ +.|+|+|++++++.+......+..+. +....+.++.++ |.+.
T Consensus 360 dPPr~g~~~~~~~~l-~~l~p~givyvsc~p~tlarDl~~l~------y~l~~~~~~DmF-P~T~ 416 (425)
T 2jjq_A 360 DPPRAGLHPRLVKRL-NREKPGVIVYVSCNPETFARDVKMLD------YRIDEIVALDMF-PHTP 416 (425)
T ss_dssp CCCTTCSCHHHHHHH-HHHCCSEEEEEESCHHHHHHHHHHSS------CCEEEEEEECCS-TTSS
T ss_pred cCCccchHHHHHHHH-HhcCCCcEEEEECChHHHHhHHhhCe------EEEEEEEEECcC-CCCc
Confidence 988532 33444 45899999999986644332222221 555666677777 6554
No 154
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.38 E-value=1.5e-12 Score=108.53 Aligned_cols=98 Identities=22% Similarity=0.234 Sum_probs=81.1
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC----CCCCCCee
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG----YPDAAPYD 204 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~----~~~~~~fD 204 (299)
..++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++ .++.+..+|.... .....+||
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 50 GRQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA-----------GAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp HTCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT-----------CSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred cCCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh-----------cccccchhhHHhhcccccccCCCcc
Confidence 34679999999999999999999999999999999999999876 2566777776642 23335699
Q ss_pred EEEecchhh-----hHHHHHHHhccCCcEEEEEecCCC
Q psy7837 205 VIYISQAIR-----DIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 205 ~v~~~~~~~-----~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
+|++..+++ .+.+++.++|+|||.+++...+..
T Consensus 119 ~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 156 (227)
T 3e8s_A 119 LICANFALLHQDIIELLSAMRTLLVPGGALVIQTLHPW 156 (227)
T ss_dssp EEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred EEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEecCcc
Confidence 999988775 566799999999999999987654
No 155
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.38 E-value=3e-12 Score=123.21 Aligned_cols=106 Identities=11% Similarity=0.041 Sum_probs=87.1
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcC---CeEEEEeCChHHHHHHHHHHHhcC-CcccCCCCeEEEEcCCCCCCCCCCCeeE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMG---AKVYAIEHVKNLCKRAMKNIRRGA-PAIALAENFEFVCADGRRGYPDAAPYDV 205 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~---~~v~~~D~~~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 205 (299)
.++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.|++++.... .......+++++++|+.......++||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 478999999999999999999997 789999999999999998765310 0002446899999999987666688999
Q ss_pred EEecchhhhHH--------HHHHHhccCCcEEEEEecCC
Q psy7837 206 IYISQAIRDIP--------WHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 206 v~~~~~~~~~~--------~~~~~~L~~gG~lv~~~~~~ 236 (299)
|++..+++++. +++.++|||| .+++.+++.
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 99999987644 4679999999 888887654
No 156
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.38 E-value=3.3e-12 Score=108.63 Aligned_cols=107 Identities=13% Similarity=0.058 Sum_probs=83.4
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcC--CeEEEEeCChHHHHHHHHHHHhcCCcc-c--CCCCeEEEEcCCCCCC---CCCC
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMG--AKVYAIEHVKNLCKRAMKNIRRGAPAI-A--LAENFEFVCADGRRGY---PDAA 201 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~-~--~~~~v~~~~~d~~~~~---~~~~ 201 (299)
.++.+|||+|||+|.++..+++.+ ..|+++|+|+.+++.++++++.+.... . ...++.++.+|+.... ...+
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 457899999999999999999885 579999999999999999887520000 0 3468999999987632 3457
Q ss_pred CeeEEEecchhh--------------hHHHHHHHhccCCcEEEEEecCC
Q psy7837 202 PYDVIYISQAIR--------------DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 202 ~fD~v~~~~~~~--------------~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
.+|.|++..+-. .+..++.++|+|||.|++.+...
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~ 176 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVK 176 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccH
Confidence 899998764432 57788999999999999976543
No 157
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.38 E-value=4.4e-12 Score=106.32 Aligned_cols=99 Identities=20% Similarity=0.219 Sum_probs=81.8
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHc-C--CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC---CCCCC
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYM-G--AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY---PDAAP 202 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~-~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~ 202 (299)
+.++.+|||+|||+|.++..+++. + .+|+++|+++.+++.++++++. . .+++++.+|+.... ...++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~-----~--~~v~~~~~d~~~~~~~~~~~~~ 143 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE-----R--RNIVPILGDATKPEEYRALVPK 143 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS-----C--TTEEEEECCTTCGGGGTTTCCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc-----c--CCCEEEEccCCCcchhhcccCC
Confidence 567889999999999999999976 3 6899999999999999998865 2 68999999987621 12357
Q ss_pred eeEEEecchhh----hHHHHHHHhccCCcEEEEEec
Q psy7837 203 YDVIYISQAIR----DIPWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 203 fD~v~~~~~~~----~~~~~~~~~L~~gG~lv~~~~ 234 (299)
||+|+++.+.. .+..++.++|+|||.+++.+.
T Consensus 144 ~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 179 (227)
T 1g8a_A 144 VDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAVK 179 (227)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 99999987654 236789999999999999854
No 158
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.37 E-value=4.8e-12 Score=106.61 Aligned_cols=103 Identities=27% Similarity=0.286 Sum_probs=82.9
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCcH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSGY 144 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~ 144 (299)
++++.+|||+|||+|.++..+++..++.++++++|+++.+++.+.+....
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~------------------------------ 124 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK------------------------------ 124 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH------------------------------
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc------------------------------
Confidence 67899999999999999999999987778899999998887776665544
Q ss_pred HHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC---CCCCCeeEEEecchhhh----HHH
Q psy7837 145 LSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY---PDAAPYDVIYISQAIRD----IPW 217 (299)
Q Consensus 145 ~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~v~~~~~~~~----~~~ 217 (299)
. .+++++.+|+.... ...++||+|+++.+..+ +..
T Consensus 125 ------------------------------------~--~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~~~~~~~~~~~ 166 (233)
T 2ipx_A 125 ------------------------------------R--TNIIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVAL 166 (233)
T ss_dssp ------------------------------------C--TTEEEECSCTTCGGGGGGGCCCEEEEEECCCCTTHHHHHHH
T ss_pred ------------------------------------c--CCeEEEEcccCChhhhcccCCcEEEEEEcCCCccHHHHHHH
Confidence 2 57899999987631 13468999999876432 356
Q ss_pred HHHHhccCCcEEEEEecC
Q psy7837 218 HIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 218 ~~~~~L~~gG~lv~~~~~ 235 (299)
++.++|+|||++++.+..
T Consensus 167 ~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 167 NAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp HHHHHEEEEEEEEEEEEH
T ss_pred HHHHHcCCCeEEEEEEcc
Confidence 789999999999998754
No 159
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.36 E-value=2.5e-12 Score=108.82 Aligned_cols=115 Identities=17% Similarity=0.265 Sum_probs=90.1
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCC
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGS 133 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 133 (299)
...++..+.. ..++.+|||+|||+|+.+..+++.+++.++++++|+++.+++.+++++...
T Consensus 58 ~~~~l~~l~~-~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~------------------ 118 (237)
T 3c3y_A 58 AGQLMSFVLK-LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKA------------------ 118 (237)
T ss_dssp HHHHHHHHHH-HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHHHHH-hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------------------
Confidence 3556665543 567789999999999999999999876789999999999999999888762
Q ss_pred eEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC-------CCCCeeEE
Q psy7837 134 KVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP-------DAAPYDVI 206 (299)
Q Consensus 134 ~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~~fD~v 206 (299)
+...+++++.+|+..... ..++||+|
T Consensus 119 -----------------------------------------------g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I 151 (237)
T 3c3y_A 119 -----------------------------------------------GVEHKINFIESDAMLALDNLLQGQESEGSYDFG 151 (237)
T ss_dssp -----------------------------------------------TCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEE
T ss_pred -----------------------------------------------CCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEE
Confidence 233479999998764211 13679999
Q ss_pred Eecchhh---hHHHHHHHhccCCcEEEEEec
Q psy7837 207 YISQAIR---DIPWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 207 ~~~~~~~---~~~~~~~~~L~~gG~lv~~~~ 234 (299)
+++.... ...+.+.++|+|||.+++...
T Consensus 152 ~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 152 FVDADKPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EECSCGGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred EECCchHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 9987654 455788999999999998653
No 160
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.36 E-value=1.2e-12 Score=108.46 Aligned_cols=100 Identities=16% Similarity=0.190 Sum_probs=81.3
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC-CCCCCeeE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY-PDAAPYDV 205 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~ 205 (299)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++++.. +...+++++.+|+.... ...+ ||+
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~~~~~-fD~ 129 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDN----GLIDRVELQVGDPLGIAAGQRD-IDI 129 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH----SGGGGEEEEESCHHHHHTTCCS-EEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC----CCCceEEEEEecHHHHhccCCC-CCE
Confidence 45789999999999999999887 678999999999999999998763 23457999999986431 1235 999
Q ss_pred EEecchhh---hHHHHHHHhccCCcEEEEEec
Q psy7837 206 IYISQAIR---DIPWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 206 v~~~~~~~---~~~~~~~~~L~~gG~lv~~~~ 234 (299)
|+++.... .+.+++.++|+|||.+++...
T Consensus 130 v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 130 LFMDCDVFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp EEEETTTSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred EEEcCChhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 99986543 456789999999999998643
No 161
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.36 E-value=5.5e-12 Score=108.70 Aligned_cols=106 Identities=18% Similarity=0.224 Sum_probs=82.7
Q ss_pred cccCCCCeEEEEcCCCcHHHHHHHHc-C--CeEEEEeCChH------HHHHHHHHHHhcCCcccCCCCeEEEEcC-CC--
Q psy7837 127 GHLVYGSKVLDIGSGSGYLSALFAYM-G--AKVYAIEHVKN------LCKRAMKNIRRGAPAIALAENFEFVCAD-GR-- 194 (299)
Q Consensus 127 ~~~~~~~~vLDiG~G~G~~~~~la~~-~--~~v~~~D~~~~------~~~~a~~~~~~~~~~~~~~~~v~~~~~d-~~-- 194 (299)
..+.++.+|||||||+|.++..+++. + .+|+++|+|+. +++.+++++... ....+++++.+| ..
T Consensus 39 ~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~ 114 (275)
T 3bkx_A 39 WQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG----PLGDRLTVHFNTNLSDD 114 (275)
T ss_dssp HTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS----TTGGGEEEECSCCTTTC
T ss_pred cCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc----CCCCceEEEECChhhhc
Confidence 35678899999999999999999987 4 78999999997 999999998763 233689999998 32
Q ss_pred CCCCCCCCeeEEEecchhhhHH------HHHHHhccCCcEEEEEecCC
Q psy7837 195 RGYPDAAPYDVIYISQAIRDIP------WHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 195 ~~~~~~~~fD~v~~~~~~~~~~------~~~~~~L~~gG~lv~~~~~~ 236 (299)
......++||+|++..+++++. +.+..+++|||.+++.....
T Consensus 115 ~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 115 LGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp CGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred cCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 2222447899999998886543 45566667799999976543
No 162
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.36 E-value=5.4e-12 Score=112.86 Aligned_cols=108 Identities=24% Similarity=0.232 Sum_probs=84.7
Q ss_pred HHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC
Q psy7837 120 IKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP 198 (299)
Q Consensus 120 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 198 (299)
.+.+.......++.+|||+|||+|.++..+++.+. +|+++|.++ +++.++++++.+ +...+++++.+|+.....
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~----~l~~~v~~~~~d~~~~~~ 113 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSN----NLTDRIVVIPGKVEEVSL 113 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHT----TCTTTEEEEESCTTTCCC
T ss_pred HHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHc----CCCCcEEEEEcchhhCCC
Confidence 34444444566889999999999999999999875 899999996 889999988873 344789999999987543
Q ss_pred CCCCeeEEEecchhh--------hHHHHHHHhccCCcEEEEEe
Q psy7837 199 DAAPYDVIYISQAIR--------DIPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 199 ~~~~fD~v~~~~~~~--------~~~~~~~~~L~~gG~lv~~~ 233 (299)
+ ++||+|++..+.. ....++.++|+|||.+++..
T Consensus 114 ~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 114 P-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp S-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred C-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 3 6799999986543 22346689999999998654
No 163
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.36 E-value=4.9e-12 Score=117.40 Aligned_cols=112 Identities=15% Similarity=0.186 Sum_probs=87.9
Q ss_pred HHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEE
Q psy7837 59 ELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDI 138 (299)
Q Consensus 59 ~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDi 138 (299)
..|...+++|++|||+|||+|..|..+++.++..++|+++|+++.+++.+++++.+
T Consensus 109 ~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r------------------------ 164 (479)
T 2frx_A 109 AALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISR------------------------ 164 (479)
T ss_dssp HHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHH------------------------
T ss_pred HHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH------------------------
Confidence 44442223999999999999999999999988778999999999999999888876
Q ss_pred cCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC-CCCCeeEEEecchhh----
Q psy7837 139 GSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP-DAAPYDVIYISQAIR---- 213 (299)
Q Consensus 139 G~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~---- 213 (299)
.+..++.++++|+..... ..++||+|+++++..
T Consensus 165 ------------------------------------------~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~ 202 (479)
T 2frx_A 165 ------------------------------------------CGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGV 202 (479)
T ss_dssp ------------------------------------------HTCCSEEEECCCSTTHHHHSTTCEEEEEEECCCCCGGG
T ss_pred ------------------------------------------cCCCcEEEEeCCHHHhhhhccccCCEEEECCCcCCccc
Confidence 345689999999876322 236799999975431
Q ss_pred ------------------------hHHHHHHHhccCCcEEEEEecCC
Q psy7837 214 ------------------------DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 214 ------------------------~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
.+.+++.++|||||+|++++.+.
T Consensus 203 ~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 203 VRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp GGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred ccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 23457889999999999986543
No 164
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.36 E-value=2.5e-12 Score=110.07 Aligned_cols=109 Identities=19% Similarity=0.263 Sum_probs=83.8
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcc------------c------------C
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAI------------A------------L 182 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~------------~------------~ 182 (299)
...++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.+++++...+... . .
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 345678999999999999999998887 89999999999999999875520000 0 0
Q ss_pred CCCe-EEEEcCCCCCCC-CC---CCeeEEEecchhh----h------HHHHHHHhccCCcEEEEEecCC
Q psy7837 183 AENF-EFVCADGRRGYP-DA---APYDVIYISQAIR----D------IPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 183 ~~~v-~~~~~d~~~~~~-~~---~~fD~v~~~~~~~----~------~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
..++ .++.+|+....+ .. ++||+|++..+++ + +.+++.++|+|||.+++.....
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 201 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALK 201 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCC
Confidence 0127 899999886433 33 6899999998887 3 2357899999999999987543
No 165
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.36 E-value=2e-12 Score=108.54 Aligned_cols=119 Identities=18% Similarity=0.221 Sum_probs=89.7
Q ss_pred cCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhc
Q psy7837 48 MESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYG 127 (299)
Q Consensus 48 ~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 127 (299)
...|.. ..++..+.. ..++.+|||+|||+|+++..+++.+++.++++++|+++.+++.+++++...
T Consensus 52 ~~~~~~-~~~l~~l~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------ 117 (229)
T 2avd_A 52 MMTCEQ-AQLLANLAR-LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQA------------ 117 (229)
T ss_dssp SCCHHH-HHHHHHHHH-HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHT------------
T ss_pred ccCHHH-HHHHHHHHH-hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC------------
Confidence 344444 344444432 678899999999999999999998766678999999999988888887762
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC----C--CC
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP----D--AA 201 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~--~~ 201 (299)
+...+++++.+|+..... . .+
T Consensus 118 -----------------------------------------------------g~~~~i~~~~~d~~~~~~~~~~~~~~~ 144 (229)
T 2avd_A 118 -----------------------------------------------------EAEHKIDLRLKPALETLDELLAAGEAG 144 (229)
T ss_dssp -----------------------------------------------------TCTTTEEEEESCHHHHHHHHHHTTCTT
T ss_pred -----------------------------------------------------CCCCeEEEEEcCHHHHHHHHHhcCCCC
Confidence 234689999998754211 1 15
Q ss_pred CeeEEEecchhh---hHHHHHHHhccCCcEEEEEe
Q psy7837 202 PYDVIYISQAIR---DIPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 202 ~fD~v~~~~~~~---~~~~~~~~~L~~gG~lv~~~ 233 (299)
+||+|+++.... ...+.+.++|+|||.+++..
T Consensus 145 ~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 145 TFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp CEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 799999987654 45678999999999999864
No 166
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.35 E-value=1.5e-12 Score=109.37 Aligned_cols=99 Identities=22% Similarity=0.205 Sum_probs=76.7
Q ss_pred CCCCeEEEEcCCCcHHHHHHHH--cCCeEEEEeCC-hHHHHHH---HHHHHhcCCcccCCCCeEEEEcCCCCCCCC-CCC
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAY--MGAKVYAIEHV-KNLCKRA---MKNIRRGAPAIALAENFEFVCADGRRGYPD-AAP 202 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~--~~~~v~~~D~~-~~~~~~a---~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~ 202 (299)
.++.+|||||||+|.++..+++ .+.+|+|+|+| +.+++.| ++++.. ....++.++++|+...... ...
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~-----~~~~~v~~~~~d~~~l~~~~~d~ 97 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSK-----GGLSNVVFVIAAAESLPFELKNI 97 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGG-----TCCSSEEEECCBTTBCCGGGTTC
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHH-----cCCCCeEEEEcCHHHhhhhccCe
Confidence 4678999999999999999985 46789999999 7777766 766655 3556899999998875321 256
Q ss_pred eeEEEecchhh-----------hHHHHHHHhccCCcEEEEEe
Q psy7837 203 YDVIYISQAIR-----------DIPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 203 fD~v~~~~~~~-----------~~~~~~~~~L~~gG~lv~~~ 233 (299)
+|.++++.++. .+..++.++|||||++++..
T Consensus 98 v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 98 ADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 78787765432 24578999999999999944
No 167
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.35 E-value=4.6e-12 Score=108.98 Aligned_cols=98 Identities=23% Similarity=0.242 Sum_probs=82.8
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.++++. .++.+..+|........++||+|+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~fD~v~ 153 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----------PQVTFCVASSHRLPFSDTSMDAII 153 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----------TTSEEEECCTTSCSBCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----------CCcEEEEcchhhCCCCCCceeEEE
Confidence 46889999999999999999987 789999999999999998762 467899999876555557899999
Q ss_pred ecchhhhHHHHHHHhccCCcEEEEEecCCCC
Q psy7837 208 ISQAIRDIPWHIVDQLKLGGRMLFIKGHEDD 238 (299)
Q Consensus 208 ~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~ 238 (299)
+..+. ...+++.++|+|||.+++..+....
T Consensus 154 ~~~~~-~~l~~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 154 RIYAP-CKAEELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp EESCC-CCHHHHHHHEEEEEEEEEEEECTTT
T ss_pred EeCCh-hhHHHHHHhcCCCcEEEEEEcCHHH
Confidence 87663 4568999999999999999876543
No 168
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.35 E-value=1.9e-12 Score=119.26 Aligned_cols=112 Identities=19% Similarity=0.143 Sum_probs=88.4
Q ss_pred HHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeE
Q psy7837 56 LVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKV 135 (299)
Q Consensus 56 ~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~v 135 (299)
.+...+. +++|++|||+|||+|..+..+++.++..|+|+++|+++.+++.+++++.+
T Consensus 92 l~a~~L~--~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r--------------------- 148 (464)
T 3m6w_A 92 AVGVLLD--PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVER--------------------- 148 (464)
T ss_dssp HHHHHHC--CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH---------------------
T ss_pred HHHHhcC--cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH---------------------
Confidence 3334444 78999999999999999999999988778999999999999999888877
Q ss_pred EEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC-CCCCeeEEEecchh--
Q psy7837 136 LDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP-DAAPYDVIYISQAI-- 212 (299)
Q Consensus 136 LDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~-- 212 (299)
.+.. +.++++|+..... ..++||+|+++++.
T Consensus 149 ---------------------------------------------~G~~-v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg 182 (464)
T 3m6w_A 149 ---------------------------------------------WGAP-LAVTQAPPRALAEAFGTYFHRVLLDAPCSG 182 (464)
T ss_dssp ---------------------------------------------HCCC-CEEECSCHHHHHHHHCSCEEEEEEECCCCC
T ss_pred ---------------------------------------------cCCe-EEEEECCHHHhhhhccccCCEEEECCCcCC
Confidence 2444 8888888765321 23679999987653
Q ss_pred --------------------------hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 213 --------------------------RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 213 --------------------------~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
..+.+++.++|||||+|++++-+.
T Consensus 183 ~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 183 EGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp GGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred ccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 234567889999999999976544
No 169
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.35 E-value=9.3e-12 Score=104.83 Aligned_cols=95 Identities=15% Similarity=0.134 Sum_probs=79.1
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEe-
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYI- 208 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~- 208 (299)
.++.+|||+|||+|.++..+++.+.+++++|+++.+++.++++. .++.++.+|+..... .++||+|++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~-~~~~D~v~~~ 107 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL----------PDATLHQGDMRDFRL-GRKFSAVVSM 107 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC----------TTCEEEECCTTTCCC-SSCEEEEEEC
T ss_pred CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC----------CCCEEEECCHHHccc-CCCCcEEEEc
Confidence 56789999999999999999998889999999999999998763 368899999887544 578999995
Q ss_pred cchhhh---------HHHHHHHhccCCcEEEEEecC
Q psy7837 209 SQAIRD---------IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 209 ~~~~~~---------~~~~~~~~L~~gG~lv~~~~~ 235 (299)
..++++ +.+++.++|+|||.+++....
T Consensus 108 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 108 FSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred CchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 435443 336789999999999998643
No 170
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.34 E-value=2.1e-12 Score=108.87 Aligned_cols=115 Identities=22% Similarity=0.261 Sum_probs=88.1
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCe
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSK 134 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 134 (299)
..++..+.. ..++.+|||+|||+|+.+..+++.+++.++++++|+++.+++.+++++...
T Consensus 61 ~~~l~~l~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~------------------- 120 (232)
T 3cbg_A 61 AQFLGLLIS-LTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKA------------------- 120 (232)
T ss_dssp HHHHHHHHH-HHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH-------------------
T ss_pred HHHHHHHHH-hcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------
Confidence 445554442 567889999999999999999998876789999999999999998887662
Q ss_pred EEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC----CCC--CCeeEEEe
Q psy7837 135 VLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY----PDA--APYDVIYI 208 (299)
Q Consensus 135 vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~----~~~--~~fD~v~~ 208 (299)
+...+++++.+|+.... ... ++||+|++
T Consensus 121 ----------------------------------------------g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~ 154 (232)
T 3cbg_A 121 ----------------------------------------------GVAEKISLRLGPALATLEQLTQGKPLPEFDLIFI 154 (232)
T ss_dssp ----------------------------------------------TCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEEE
T ss_pred ----------------------------------------------CCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEE
Confidence 23357899999875321 112 67999999
Q ss_pred cchhh---hHHHHHHHhccCCcEEEEEecC
Q psy7837 209 SQAIR---DIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 209 ~~~~~---~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
+.... ...+++.++|+|||.+++....
T Consensus 155 d~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 155 DADKRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp CSCGGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred CCCHHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 87643 4557889999999999997543
No 171
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.34 E-value=1.5e-12 Score=104.39 Aligned_cols=91 Identities=15% Similarity=0.151 Sum_probs=76.1
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEec
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYIS 209 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 209 (299)
.++.+|||+|||+|.++..+++.+ +|+++|+|+.+++. ..+++++++|+..... .++||+|+++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~--------------~~~~~~~~~d~~~~~~-~~~fD~i~~n 85 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES--------------HRGGNLVRADLLCSIN-QESVDVVVFN 85 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT--------------CSSSCEEECSTTTTBC-GGGCSEEEEC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc--------------ccCCeEEECChhhhcc-cCCCCEEEEC
Confidence 457799999999999999999999 99999999999976 2368899999987443 3789999999
Q ss_pred chhh---------------hHHHHHHHhccCCcEEEEEecCCC
Q psy7837 210 QAIR---------------DIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 210 ~~~~---------------~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
.++. .+.+++.+.| |||.+++......
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~ 127 (170)
T 3q87_B 86 PPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN 127 (170)
T ss_dssp CCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG
T ss_pred CCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCC
Confidence 8765 3456788888 9999999876543
No 172
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.34 E-value=5.8e-12 Score=103.41 Aligned_cols=103 Identities=18% Similarity=0.168 Sum_probs=76.9
Q ss_pred HHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHc----CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCC
Q psy7837 118 TYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYM----GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADG 193 (299)
Q Consensus 118 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~----~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 193 (299)
++.+.+.....+.++.+|||+|||+|.++..+++. +.+|+++|+++.. ...++.++++|+
T Consensus 9 kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------------~~~~v~~~~~d~ 72 (201)
T 2plw_A 9 KLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------------PIPNVYFIQGEI 72 (201)
T ss_dssp HHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------------CCTTCEEEECCT
T ss_pred HHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------------CCCCceEEEccc
Confidence 33443444444677899999999999999999876 3679999999831 235789999998
Q ss_pred CCCC-------------------------CCCCCeeEEEecchhhh-----------------HHHHHHHhccCCcEEEE
Q psy7837 194 RRGY-------------------------PDAAPYDVIYISQAIRD-----------------IPWHIVDQLKLGGRMLF 231 (299)
Q Consensus 194 ~~~~-------------------------~~~~~fD~v~~~~~~~~-----------------~~~~~~~~L~~gG~lv~ 231 (299)
.... ...++||+|+++..++. +.+++.++|+|||.+++
T Consensus 73 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~ 152 (201)
T 2plw_A 73 GKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIV 152 (201)
T ss_dssp TTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 7643 23468999999865432 34568899999999999
Q ss_pred EecCC
Q psy7837 232 IKGHE 236 (299)
Q Consensus 232 ~~~~~ 236 (299)
.....
T Consensus 153 ~~~~~ 157 (201)
T 2plw_A 153 KMYLG 157 (201)
T ss_dssp EEECS
T ss_pred EEeCC
Confidence 76554
No 173
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.34 E-value=3.6e-12 Score=106.11 Aligned_cols=105 Identities=16% Similarity=0.168 Sum_probs=77.5
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVI 206 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 206 (299)
..++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+.++++..... ....+++++++|+.......+. |.+
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~-~~~~~v~~~~~d~~~l~~~~~~-d~v 102 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAK-GGLPNLLYLWATAERLPPLSGV-GEL 102 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGG-TCCTTEEEEECCSTTCCSCCCE-EEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhh-cCCCceEEEecchhhCCCCCCC-CEE
Confidence 356889999999999999999988 678999999999888644333221000 3456899999999875544444 766
Q ss_pred Eecch---h--------hhHHHHHHHhccCCcEEEEEecC
Q psy7837 207 YISQA---I--------RDIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 207 ~~~~~---~--------~~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
++... . ..+.+++.++|||||.+++....
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (218)
T 3mq2_A 103 HVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNL 142 (218)
T ss_dssp EEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEG
T ss_pred EEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEecc
Confidence 64432 2 34557899999999999997643
No 174
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.34 E-value=2.1e-11 Score=105.74 Aligned_cols=110 Identities=17% Similarity=0.203 Sum_probs=80.7
Q ss_pred cccCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeC-ChHHHHHHHHHHHhcCCcccCC-----CCeEEEEcCCCCC---
Q psy7837 127 GHLVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEH-VKNLCKRAMKNIRRGAPAIALA-----ENFEFVCADGRRG--- 196 (299)
Q Consensus 127 ~~~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~-~~~~~~~a~~~~~~~~~~~~~~-----~~v~~~~~d~~~~--- 196 (299)
....++.+|||+|||+|.+++.+++.+. +|+++|+ ++.+++.++++++.|....... .++.+...|....
T Consensus 75 ~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 154 (281)
T 3bzb_A 75 PELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDS 154 (281)
T ss_dssp GGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHH
T ss_pred chhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHH
Confidence 3446788999999999999999999887 8999999 8999999999984321000122 3788886665432
Q ss_pred CC---CCCCeeEEEecchhh------hHHHHHHHhcc---C--CcEEEEEecCC
Q psy7837 197 YP---DAAPYDVIYISQAIR------DIPWHIVDQLK---L--GGRMLFIKGHE 236 (299)
Q Consensus 197 ~~---~~~~fD~v~~~~~~~------~~~~~~~~~L~---~--gG~lv~~~~~~ 236 (299)
.. ..++||+|++..++. .+.+.+.++|+ | ||++++...+.
T Consensus 155 ~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~ 208 (281)
T 3bzb_A 155 LQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHH 208 (281)
T ss_dssp HHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-
T ss_pred HHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEee
Confidence 11 236799999866543 45678999999 9 99988876654
No 175
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.33 E-value=4.1e-12 Score=116.91 Aligned_cols=133 Identities=16% Similarity=0.126 Sum_probs=99.1
Q ss_pred cccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC----CCCC
Q psy7837 127 GHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP----DAAP 202 (299)
Q Consensus 127 ~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~ 202 (299)
....++.+|||+|||+|.+++.+++.+.+|+++|+|+.+++.|++|++. .+..+++|+.+|+..... ..++
T Consensus 282 l~~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~-----~~~~~v~f~~~d~~~~l~~~~~~~~~ 356 (433)
T 1uwv_A 282 LDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARL-----NGLQNVTFYHENLEEDVTKQPWAKNG 356 (433)
T ss_dssp HTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHH-----TTCCSEEEEECCTTSCCSSSGGGTTC
T ss_pred hcCCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHH-----cCCCceEEEECCHHHHhhhhhhhcCC
Confidence 3456788999999999999999999999999999999999999999988 355699999999987432 2357
Q ss_pred eeEEEecchhhh---HHHHHHHhccCCcEEEEEecCCCCcceeeeEEeecCCceEEEEecceeccccccc
Q psy7837 203 YDVIYISQAIRD---IPWHIVDQLKLGGRMLFIKGHEDDIMTLELLDKFVNGSVKTTVIHPHVYIHELKS 269 (299)
Q Consensus 203 fD~v~~~~~~~~---~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (299)
||+|+++++... +.+.+. .++|++++++++.+......+..+ .+.++....+.++.++ |.+.
T Consensus 357 fD~Vv~dPPr~g~~~~~~~l~-~~~p~~ivyvsc~p~tlard~~~l---~~~Gy~~~~~~~~d~F-p~t~ 421 (433)
T 1uwv_A 357 FDKVLLDPARAGAAGVMQQII-KLEPIRIVYVSCNPATLARDSEAL---LKAGYTIARLAMLDMF-PHTG 421 (433)
T ss_dssp CSEEEECCCTTCCHHHHHHHH-HHCCSEEEEEESCHHHHHHHHHHH---HHTTCEEEEEEEECCS-TTSS
T ss_pred CCEEEECCCCccHHHHHHHHH-hcCCCeEEEEECChHHHHhhHHHH---HHCCcEEEEEEEeccC-CCCC
Confidence 999999987643 333333 368999999988655333222222 2345777777777776 5443
No 176
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.33 E-value=4.5e-12 Score=110.57 Aligned_cols=106 Identities=17% Similarity=0.114 Sum_probs=81.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC-CCCCeeEEE
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP-DAAPYDVIY 207 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~ 207 (299)
++.+|||||||+|.++..+++. ..+|+++|+++.+++.+++++...+.......+++++.+|+..... ..++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 4689999999999999999987 4679999999999999999886521000124589999999886543 247899999
Q ss_pred ecchh----------hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 208 ISQAI----------RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 208 ~~~~~----------~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
++... ..+.+.+.++|+|||++++....+
T Consensus 163 ~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~ 201 (294)
T 3adn_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp ECC----------CCHHHHHHHHHTEEEEEEEEEEEEEC
T ss_pred ECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCc
Confidence 97653 235568999999999999987543
No 177
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.33 E-value=1.9e-11 Score=112.97 Aligned_cols=107 Identities=19% Similarity=0.238 Sum_probs=86.9
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCcH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSGY 144 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~ 144 (299)
+++|++|||+|||+|..+..+++.++..++++++|+++.+++.+++++..
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~------------------------------ 306 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKR------------------------------ 306 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH------------------------------
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHH------------------------------
Confidence 88999999999999999999999886668899999999988888888776
Q ss_pred HHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC--CCCCCeeEEEecchh----------
Q psy7837 145 LSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY--PDAAPYDVIYISQAI---------- 212 (299)
Q Consensus 145 ~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~v~~~~~~---------- 212 (299)
.+..++.++++|+.... ...++||+|+++++.
T Consensus 307 ------------------------------------~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p 350 (450)
T 2yxl_A 307 ------------------------------------MGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNP 350 (450)
T ss_dssp ------------------------------------TTCCSEEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTST
T ss_pred ------------------------------------cCCCcEEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccCh
Confidence 34568999999987643 223679999986543
Q ss_pred ------------------hhHHHHHHHhccCCcEEEEEecCCC
Q psy7837 213 ------------------RDIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 213 ------------------~~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
..+.+++.++|||||++++++.+..
T Consensus 351 d~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 351 ELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp THHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred hhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 2345688999999999999876544
No 178
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.32 E-value=1.3e-11 Score=108.62 Aligned_cols=107 Identities=15% Similarity=0.094 Sum_probs=83.2
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc-CCeEEEEeCChHHHHHHHHHHHhcCCc--ccCCCCeEEEEcCCCCCC----C--CC
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM-GAKVYAIEHVKNLCKRAMKNIRRGAPA--IALAENFEFVCADGRRGY----P--DA 200 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~--~~~~~~v~~~~~d~~~~~----~--~~ 200 (299)
.++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++....... .....++.++++|+.... . ..
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 46789999999999999999876 568999999999999999987652000 003357999999998643 2 23
Q ss_pred CCeeEEEecchhhhH----------HHHHHHhccCCcEEEEEecCC
Q psy7837 201 APYDVIYISQAIRDI----------PWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 201 ~~fD~v~~~~~~~~~----------~~~~~~~L~~gG~lv~~~~~~ 236 (299)
++||+|++..+++++ .+++.++|+|||.+++.++..
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 589999999888554 357889999999999998754
No 179
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.32 E-value=1.4e-11 Score=111.15 Aligned_cols=101 Identities=19% Similarity=0.165 Sum_probs=81.7
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCC--eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGA--KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVI 206 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~--~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 206 (299)
..++.+|||+|||+|.+++.++..+. +|+++|+++.+++.|++|++.+ +...+++++++|+.......++||+|
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~----gl~~~i~~~~~D~~~~~~~~~~fD~I 290 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAA----GVLDKIKFIQGDATQLSQYVDSVDFA 290 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHT----TCGGGCEEEECCGGGGGGTCSCEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHc----CCCCceEEEECChhhCCcccCCcCEE
Confidence 56789999999999999999999987 8999999999999999999873 23368999999998765555789999
Q ss_pred Eecchh--------------hhHHHHHHHhccCCcEEEEEecC
Q psy7837 207 YISQAI--------------RDIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 207 ~~~~~~--------------~~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
++++++ ..+.+++.++| +|.+++....
T Consensus 291 i~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~ 331 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE 331 (373)
T ss_dssp EEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESC
T ss_pred EECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC
Confidence 998773 22345677777 6666666554
No 180
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.31 E-value=8.3e-12 Score=102.10 Aligned_cols=104 Identities=17% Similarity=0.194 Sum_probs=78.2
Q ss_pred HHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC
Q psy7837 118 TYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY 197 (299)
Q Consensus 118 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 197 (299)
++.+.+.....+.++.+|||+|||+|.++..+++.+.+|+++|+++. ....+++++++|+....
T Consensus 12 KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~----------------~~~~~v~~~~~D~~~~~ 75 (191)
T 3dou_A 12 KLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEM----------------EEIAGVRFIRCDIFKET 75 (191)
T ss_dssp HHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCC----------------CCCTTCEEEECCTTSSS
T ss_pred HHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHcCCcEEEEecccc----------------ccCCCeEEEEccccCHH
Confidence 34444444445678999999999999999999999999999999874 12358999999987642
Q ss_pred C--------C---CCCeeEEEecchh-----------------hhHHHHHHHhccCCcEEEEEecCCC
Q psy7837 198 P--------D---AAPYDVIYISQAI-----------------RDIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 198 ~--------~---~~~fD~v~~~~~~-----------------~~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
. . .++||+|++++.. ..+.+.+.++|||||.|++.+....
T Consensus 76 ~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~ 143 (191)
T 3dou_A 76 IFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD 143 (191)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred HHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCC
Confidence 1 0 0379999997642 1233567899999999999876543
No 181
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.31 E-value=5e-12 Score=116.29 Aligned_cols=112 Identities=19% Similarity=0.164 Sum_probs=89.2
Q ss_pred HHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEE
Q psy7837 57 VLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVL 136 (299)
Q Consensus 57 ~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vL 136 (299)
+...+. +++|++|||+|||+|..|..+++.++..|+|+++|+++..++.+++++.+
T Consensus 97 ~~~~L~--~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r---------------------- 152 (456)
T 3m4x_A 97 VGTAAA--AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIER---------------------- 152 (456)
T ss_dssp HHHHHC--CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHH----------------------
T ss_pred HHHHcC--CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH----------------------
Confidence 334444 78999999999999999999999988778999999999999999888877
Q ss_pred EEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC-CCCCeeEEEecchh---
Q psy7837 137 DIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP-DAAPYDVIYISQAI--- 212 (299)
Q Consensus 137 DiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~--- 212 (299)
.+..++.++++|+..... ..++||+|+++++.
T Consensus 153 --------------------------------------------~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~ 188 (456)
T 3m4x_A 153 --------------------------------------------WGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPCSGE 188 (456)
T ss_dssp --------------------------------------------HTCSSEEEECCCHHHHHHHHTTCEEEEEEECCCCCG
T ss_pred --------------------------------------------cCCCceEEEeCCHHHhhhhccccCCEEEECCCCCCc
Confidence 345688999998765321 23679999998762
Q ss_pred -------------------------hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 213 -------------------------RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 213 -------------------------~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
..+.+++.++|||||+|++++-+.
T Consensus 189 G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 189 GMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp GGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred cccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 034567889999999999876544
No 182
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.31 E-value=3.3e-12 Score=115.72 Aligned_cols=104 Identities=17% Similarity=0.173 Sum_probs=84.8
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCC--CeEEEEcCCCCCCC----CCCC
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAE--NFEFVCADGRRGYP----DAAP 202 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~--~v~~~~~d~~~~~~----~~~~ 202 (299)
.++.+|||+|||+|.+++.+++.++ +|+++|+|+.+++.|++|++.+ +.. +++++++|+..... ...+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n-----~~~~~~v~~~~~D~~~~l~~~~~~~~~ 285 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEAN-----HLDMANHQLVVMDVFDYFKYARRHHLT 285 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHT-----TCCCTTEEEEESCHHHHHHHHHHTTCC
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCccceEEEECCHHHHHHHHHHhCCC
Confidence 5688999999999999999999876 7999999999999999999884 333 89999999875321 1357
Q ss_pred eeEEEecchhh---------------hHHHHHHHhccCCcEEEEEecCCCC
Q psy7837 203 YDVIYISQAIR---------------DIPWHIVDQLKLGGRMLFIKGHEDD 238 (299)
Q Consensus 203 fD~v~~~~~~~---------------~~~~~~~~~L~~gG~lv~~~~~~~~ 238 (299)
||+|+++++.. .+...+.++|+|||.+++++.+...
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~ 336 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM 336 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC
Confidence 99999987652 1334568999999999999876653
No 183
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.31 E-value=1e-11 Score=103.65 Aligned_cols=96 Identities=21% Similarity=0.224 Sum_probs=79.7
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCC--CCCCCCCeeEEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRR--GYPDAAPYDVIY 207 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~fD~v~ 207 (299)
.++.+|||+|||+|.++..+++.+.+++++|+++.+++.++++. .+++.+|+.. .....++||+|+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~------------~~~~~~d~~~~~~~~~~~~fD~v~ 98 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL------------DHVVLGDIETMDMPYEEEQFDCVI 98 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS------------SEEEESCTTTCCCCSCTTCEEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC------------CcEEEcchhhcCCCCCCCccCEEE
Confidence 57889999999999999999988889999999999999887652 2678888875 233447899999
Q ss_pred ecchhhhH------HHHHHHhccCCcEEEEEecCCC
Q psy7837 208 ISQAIRDI------PWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 208 ~~~~~~~~------~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
+..+++++ .+++.++|+|||.+++..+...
T Consensus 99 ~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 99 FGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVS 134 (230)
T ss_dssp EESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTT
T ss_pred ECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 99887654 4688899999999999987643
No 184
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.31 E-value=3.5e-12 Score=115.48 Aligned_cols=102 Identities=19% Similarity=0.222 Sum_probs=85.5
Q ss_pred CCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC----CCCCeeEE
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP----DAAPYDVI 206 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD~v 206 (299)
++.+|||+|||+|.++..+++.+.+|+++|+++.+++.+++|++.+ +..+++++.+|+..... ...+||+|
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n-----~~~~~~~~~~d~~~~~~~~~~~~~~fD~I 283 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLN-----GLGNVRVLEANAFDLLRRLEKEGERFDLV 283 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHT-----TCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHc-----CCCCceEEECCHHHHHHHHHhcCCCeeEE
Confidence 7889999999999999999988778999999999999999999983 55569999999875322 13679999
Q ss_pred Eecchh---------------hhHHHHHHHhccCCcEEEEEecCCC
Q psy7837 207 YISQAI---------------RDIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 207 ~~~~~~---------------~~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
+++++. ..+...+.++|+|||.+++++.+..
T Consensus 284 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 284 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 998754 2345678999999999999987654
No 185
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.30 E-value=3.3e-12 Score=111.38 Aligned_cols=103 Identities=17% Similarity=0.175 Sum_probs=75.0
Q ss_pred CCCCeEEEEcCCCcHHHHHH----HHc--CCe--EEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEE--EcCCCCCC--
Q psy7837 130 VYGSKVLDIGSGSGYLSALF----AYM--GAK--VYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFV--CADGRRGY-- 197 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~l----a~~--~~~--v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~--~~d~~~~~-- 197 (299)
.++.+|||||||+|.++..+ +.. +.. ++++|+|++|++.+++++... ....++.+. .++.....
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~----~~~~~v~~~~~~~~~~~~~~~ 126 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKT----SNLENVKFAWHKETSSEYQSR 126 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTC----SSCTTEEEEEECSCHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhc----cCCCcceEEEEecchhhhhhh
Confidence 56779999999999876533 222 444 499999999999999988651 134555554 44443211
Q ss_pred ----CCCCCeeEEEecchhhhHH------HHHHHhccCCcEEEEEecCC
Q psy7837 198 ----PDAAPYDVIYISQAIRDIP------WHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 198 ----~~~~~fD~v~~~~~~~~~~------~~~~~~L~~gG~lv~~~~~~ 236 (299)
...++||+|++..+++++. +++.++|||||++++.....
T Consensus 127 ~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 127 MLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp HHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred hccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 2347899999999987653 58999999999999986554
No 186
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.30 E-value=5e-11 Score=105.80 Aligned_cols=101 Identities=17% Similarity=0.156 Sum_probs=83.2
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVI 206 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 206 (299)
..+..+|||+|||+|.++..+++. +.+++++|+ +.+++.+++++... ....+++++.+|+....+. +||+|
T Consensus 167 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~p~--~~D~v 239 (332)
T 3i53_A 167 WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDT----GLSGRAQVVVGSFFDPLPA--GAGGY 239 (332)
T ss_dssp CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT----TCTTTEEEEECCTTSCCCC--SCSEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhc----CcCcCeEEecCCCCCCCCC--CCcEE
Confidence 355789999999999999999875 568999999 99999999998763 3457899999999854332 79999
Q ss_pred EecchhhhH--------HHHHHHhccCCcEEEEEecCC
Q psy7837 207 YISQAIRDI--------PWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 207 ~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~~~ 236 (299)
++..+++++ .+++.+.|+|||++++.....
T Consensus 240 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 240 VLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred EEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 999988643 457899999999999976543
No 187
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.30 E-value=5.9e-12 Score=114.08 Aligned_cols=102 Identities=15% Similarity=0.089 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCC-CCCeeEEEe
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPD-AAPYDVIYI 208 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~v~~ 208 (299)
.++.+|||+|||+|.+++.+++.|+.|+++|+|+.+++.+++|++.+ +.. ..+.++|+...... .+.||+|++
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~n-----g~~-~~~~~~D~~~~l~~~~~~fD~Ii~ 286 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRL-----GLR-VDIRHGEALPTLRGLEGPFHHVLL 286 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----TCC-CEEEESCHHHHHHTCCCCEEEEEE
T ss_pred cCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHh-----CCC-CcEEEccHHHHHHHhcCCCCEEEE
Confidence 35899999999999999999999999999999999999999999884 332 35668888753211 234999999
Q ss_pred cchh---------------hhHHHHHHHhccCCcEEEEEecCCC
Q psy7837 209 SQAI---------------RDIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 209 ~~~~---------------~~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
+++. ..+.+.+.++|+|||.|++......
T Consensus 287 dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 287 DPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp CCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 9875 2455678999999999996655443
No 188
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.30 E-value=1.1e-12 Score=110.66 Aligned_cols=112 Identities=25% Similarity=0.299 Sum_probs=73.5
Q ss_pred HHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEE-cCCCC
Q psy7837 118 TYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVC-ADGRR 195 (299)
Q Consensus 118 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~-~d~~~ 195 (299)
++.+.+..+....++.+|||+|||+|.++..+++.++ +|+++|+|+.|++.++++..+.. .....++.+.. .|...
T Consensus 24 kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~--~~~~~~~~~~~~~~~~~ 101 (232)
T 3opn_A 24 KLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVV--VMEQFNFRNAVLADFEQ 101 (232)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEE--EECSCCGGGCCGGGCCS
T ss_pred HHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcccc--ccccceEEEeCHhHcCc
Confidence 4444455554455678999999999999999999985 89999999999998777533200 00111222222 22222
Q ss_pred CCCCCCCeeEEEecchhhhHHHHHHHhccCCcEEEEEe
Q psy7837 196 GYPDAAPYDVIYISQAIRDIPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 196 ~~~~~~~fD~v~~~~~~~~~~~~~~~~L~~gG~lv~~~ 233 (299)
..+....||+++++ +..+.+++.++|||||.+++.+
T Consensus 102 ~~~d~~~~D~v~~~--l~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 102 GRPSFTSIDVSFIS--LDLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp CCCSEEEECCSSSC--GGGTHHHHHHHSCTTCEEEEEE
T ss_pred CCCCEEEEEEEhhh--HHHHHHHHHHhccCCCEEEEEE
Confidence 11222345555443 3667889999999999999975
No 189
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.30 E-value=1.5e-12 Score=117.37 Aligned_cols=129 Identities=16% Similarity=0.146 Sum_probs=97.4
Q ss_pred CCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC---CCC--------
Q psy7837 132 GSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY---PDA-------- 200 (299)
Q Consensus 132 ~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~~~-------- 200 (299)
+.+|||+|||+|.+++.+++.+.+|+++|+++.+++.|++|++.+ +..+++++.+|+.... ...
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~n-----g~~~v~~~~~d~~~~~~~~~~~~~~~~l~~ 288 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAAN-----HIDNVQIIRMAAEEFTQAMNGVREFNRLQG 288 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHT-----TCCSEEEECCCSHHHHHHHSSCCCCTTGGG
T ss_pred CCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHc-----CCCceEEEECCHHHHHHHHhhccccccccc
Confidence 578999999999999999998889999999999999999999883 5578999999986421 111
Q ss_pred -----CCeeEEEecchhhhHHHHHHHhccCCcEEEEEecCCC-CcceeeeEEeecCCceEEEEecceecccccccc
Q psy7837 201 -----APYDVIYISQAIRDIPWHIVDQLKLGGRMLFIKGHED-DIMTLELLDKFVNGSVKTTVIHPHVYIHELKSL 270 (299)
Q Consensus 201 -----~~fD~v~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (299)
.+||+|+++++...+.+++.+.|+++|.+++..-++. ....+..+. . .+....+.++.++ |.+.-
T Consensus 289 ~~~~~~~fD~Vv~dPPr~g~~~~~~~~l~~~g~ivyvsc~p~t~ard~~~l~---~-~y~~~~~~~~D~F-P~T~H 359 (369)
T 3bt7_A 289 IDLKSYQCETIFVDPPRSGLDSETEKMVQAYPRILYISCNPETLCKNLETLS---Q-THKVERLALFDQF-PYTHH 359 (369)
T ss_dssp SCGGGCCEEEEEECCCTTCCCHHHHHHHTTSSEEEEEESCHHHHHHHHHHHH---H-HEEEEEEEEECCS-TTSSC
T ss_pred cccccCCCCEEEECcCccccHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHh---h-CcEEEEEEeeccC-CCCCc
Confidence 2799999999887677778888888888877654432 112222221 1 3777777777777 65543
No 190
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.30 E-value=7.5e-11 Score=106.25 Aligned_cols=103 Identities=25% Similarity=0.299 Sum_probs=85.0
Q ss_pred hcccCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCe
Q psy7837 126 YGHLVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPY 203 (299)
Q Consensus 126 ~~~~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 203 (299)
.....++.+|||+|||+|.++..+++. +.+++++|+ +.+++.+++++... ....+++++.+|+....+. +|
T Consensus 197 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~----~l~~~v~~~~~d~~~~~p~--~~ 269 (369)
T 3gwz_A 197 AYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGR----GLADRCEILPGDFFETIPD--GA 269 (369)
T ss_dssp HSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT----TCTTTEEEEECCTTTCCCS--SC
T ss_pred hCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhc----CcCCceEEeccCCCCCCCC--Cc
Confidence 334567789999999999999999887 568999999 99999999998763 3457899999999854332 79
Q ss_pred eEEEecchhhh--------HHHHHHHhccCCcEEEEEecC
Q psy7837 204 DVIYISQAIRD--------IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 204 D~v~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~ 235 (299)
|+|++..++++ +.+++.+.|+|||++++....
T Consensus 270 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 309 (369)
T 3gwz_A 270 DVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNL 309 (369)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEB
T ss_pred eEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 99999998854 446789999999999997643
No 191
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.30 E-value=1.2e-11 Score=114.87 Aligned_cols=109 Identities=25% Similarity=0.250 Sum_probs=84.2
Q ss_pred HHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC
Q psy7837 119 YIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY 197 (299)
Q Consensus 119 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 197 (299)
+.+.+.......++.+|||+|||+|.++..+++.+. +|+++|+++ +++.|+++++.+ +...+++++.+|+....
T Consensus 146 ~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~----gl~~~v~~~~~d~~~~~ 220 (480)
T 3b3j_A 146 YQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSN----NLTDRIVVIPGKVEEVS 220 (480)
T ss_dssp HHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHT----TCTTTEEEEESCTTTCC
T ss_pred HHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHc----CCCCcEEEEECchhhCc
Confidence 333343333456789999999999999999998864 899999998 999999998874 34478999999998743
Q ss_pred CCCCCeeEEEecchhhhH--------HHHHHHhccCCcEEEEEe
Q psy7837 198 PDAAPYDVIYISQAIRDI--------PWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 198 ~~~~~fD~v~~~~~~~~~--------~~~~~~~L~~gG~lv~~~ 233 (299)
.+ ++||+|+++.+..++ ...+.++|+|||.+++..
T Consensus 221 ~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 221 LP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp CS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred cC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 33 579999998764322 235678999999998643
No 192
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.29 E-value=1e-11 Score=103.55 Aligned_cols=98 Identities=14% Similarity=0.133 Sum_probs=80.1
Q ss_pred hhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCe
Q psy7837 124 NFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPY 203 (299)
Q Consensus 124 ~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 203 (299)
..+....++.+|||+|||+|.++..+++. +++|+++.+++.++++ ++.++.+|+.......++|
T Consensus 40 ~~l~~~~~~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~------------~~~~~~~d~~~~~~~~~~f 103 (219)
T 1vlm_A 40 QAVKCLLPEGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR------------GVFVLKGTAENLPLKDESF 103 (219)
T ss_dssp HHHHHHCCSSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT------------TCEEEECBTTBCCSCTTCE
T ss_pred HHHHHhCCCCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc------------CCEEEEcccccCCCCCCCe
Confidence 33444455899999999999999988776 9999999999998764 5788999987755555789
Q ss_pred eEEEecchhhh------HHHHHHHhccCCcEEEEEecCCC
Q psy7837 204 DVIYISQAIRD------IPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 204 D~v~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
|+|++..++++ +.+++.++|+|||.+++......
T Consensus 104 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 143 (219)
T 1vlm_A 104 DFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVDRE 143 (219)
T ss_dssp EEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred eEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCCc
Confidence 99999988754 44688999999999999876543
No 193
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.29 E-value=1.1e-11 Score=110.62 Aligned_cols=100 Identities=19% Similarity=0.219 Sum_probs=82.4
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcC--CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMG--AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
.++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.++++++.+ . .+..++.+|..... .++||+|+
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~-----~-~~~~~~~~d~~~~~--~~~fD~Iv 266 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN-----G-VEGEVFASNVFSEV--KGRFDMII 266 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT-----T-CCCEEEECSTTTTC--CSCEEEEE
T ss_pred CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh-----C-CCCEEEEccccccc--cCCeeEEE
Confidence 356799999999999999999886 58999999999999999998873 2 23677889987643 46899999
Q ss_pred ecchhhh-----------HHHHHHHhccCCcEEEEEecCCC
Q psy7837 208 ISQAIRD-----------IPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 208 ~~~~~~~-----------~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
++.+++. +.+++.++|+|||.+++..+...
T Consensus 267 ~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 307 (343)
T 2pjd_A 267 SNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFL 307 (343)
T ss_dssp ECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTS
T ss_pred ECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCC
Confidence 9887652 34688999999999999876543
No 194
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.29 E-value=7.2e-12 Score=108.99 Aligned_cols=104 Identities=20% Similarity=0.241 Sum_probs=75.4
Q ss_pred CCCCeEEEEcCCCcHHHHHHHH-cCCeEEEEeCChHHHHHHHHHHHhcCCcc------------cC-C------------
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAY-MGAKVYAIEHVKNLCKRAMKNIRRGAPAI------------AL-A------------ 183 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~------------~~-~------------ 183 (299)
.++.+|||+|||+|.+...++. .+.+|+++|+|+.+++.++++++...... .. .
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 4678999999999996655554 37799999999999999998664310000 00 0
Q ss_pred CCeEEEEcCCCC-CC-----CCCCCeeEEEecchhhh----HH------HHHHHhccCCcEEEEEe
Q psy7837 184 ENFEFVCADGRR-GY-----PDAAPYDVIYISQAIRD----IP------WHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 184 ~~v~~~~~d~~~-~~-----~~~~~fD~v~~~~~~~~----~~------~~~~~~L~~gG~lv~~~ 233 (299)
..+.++.+|+.. .+ .+.++||+|+++.++++ +. +++.++|||||+|++..
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 025677788876 22 12356999999999877 42 47899999999999974
No 195
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.29 E-value=1.8e-11 Score=108.97 Aligned_cols=99 Identities=18% Similarity=0.172 Sum_probs=84.5
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEec
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYIS 209 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 209 (299)
.++.+|||+|||+|.+++. ++.+.+|+++|+|+.+++.+++|++.+ +...+++++++|+.... ++||+|+++
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n----~l~~~v~~~~~D~~~~~---~~fD~Vi~d 265 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLN----KLEHKIIPILSDVREVD---VKGNRVIMN 265 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHT----TCTTTEEEEESCGGGCC---CCEEEEEEC
T ss_pred CCCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHc----CCCCcEEEEECChHHhc---CCCcEEEEC
Confidence 5789999999999999999 886678999999999999999999884 23368999999998765 679999998
Q ss_pred chh--hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 210 QAI--RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 210 ~~~--~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
.+. ..+.+.+.++|+|||.+++.....
T Consensus 266 pP~~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 266 LPKFAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp CTTTGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred CcHhHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 653 456788999999999998875544
No 196
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.29 E-value=6.5e-12 Score=108.75 Aligned_cols=108 Identities=17% Similarity=0.117 Sum_probs=75.7
Q ss_pred HHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEE-EEcCCCC
Q psy7837 118 TYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEF-VCADGRR 195 (299)
Q Consensus 118 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~-~~~d~~~ 195 (299)
++.+.+..+....++.+|||+|||+|.++..+++.++ +|+++|++++|++.+.++- .++.. ...|+..
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~----------~rv~~~~~~ni~~ 141 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD----------DRVRSMEQYNFRY 141 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC----------TTEEEECSCCGGG
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC----------cccceecccCcee
Confidence 3344444444445788999999999999999999975 7999999999998754421 12222 1223322
Q ss_pred CC---CCCCCeeEEEecchhh---hHHHHHHHhccCCcEEEEEecC
Q psy7837 196 GY---PDAAPYDVIYISQAIR---DIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 196 ~~---~~~~~fD~v~~~~~~~---~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
.. .+..+||+|+++..+. .+.+++.++|+|||.+++.+.+
T Consensus 142 l~~~~l~~~~fD~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~lvkP 187 (291)
T 3hp7_A 142 AEPVDFTEGLPSFASIDVSFISLNLILPALAKILVDGGQVVALVKP 187 (291)
T ss_dssp CCGGGCTTCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEEECG
T ss_pred cchhhCCCCCCCEEEEEeeHhhHHHHHHHHHHHcCcCCEEEEEECc
Confidence 11 1224599999988764 4668999999999999998543
No 197
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.28 E-value=1.3e-11 Score=109.50 Aligned_cols=105 Identities=18% Similarity=0.131 Sum_probs=82.5
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC--CCCCCeeE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY--PDAAPYDV 205 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~ 205 (299)
..+.+|||||||+|.++..+++. +.+|+++|+++.+++.+++++...+.. ....+++++.+|+.... ...++||+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~g-l~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIG-YEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGG-GGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccc-cCCCcEEEEECCHHHHHHhccCCCccE
Confidence 45689999999999999999987 468999999999999999987641000 12468999999987532 12368999
Q ss_pred EEecch----------hhhHHHHHHHhccCCcEEEEEecC
Q psy7837 206 IYISQA----------IRDIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 206 v~~~~~----------~~~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
|+++.. ...+.+.+.++|+|||++++....
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 237 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAES 237 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 999764 134667899999999999997544
No 198
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.27 E-value=7e-12 Score=114.07 Aligned_cols=103 Identities=21% Similarity=0.203 Sum_probs=85.7
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCC-C-CeEEEEcCCCCCCC----CCCC
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALA-E-NFEFVCADGRRGYP----DAAP 202 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~-~-~v~~~~~d~~~~~~----~~~~ 202 (299)
.++.+|||+|||+|.+++.+++.|+ +|+++|+++.+++.+++|++.+ +. . +++++.+|+..... ...+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~n-----gl~~~~v~~~~~D~~~~~~~~~~~~~~ 293 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELN-----KLDLSKAEFVRDDVFKLLRTYRDRGEK 293 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT-----TCCGGGEEEEESCHHHHHHHHHHTTCC
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCccceEEEECCHHHHHHHHHhcCCC
Confidence 5688999999999999999999964 7999999999999999999884 33 3 89999999875322 1357
Q ss_pred eeEEEecchh---------------hhHHHHHHHhccCCcEEEEEecCCC
Q psy7837 203 YDVIYISQAI---------------RDIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 203 fD~v~~~~~~---------------~~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
||+|+++++. ..+...+.+.|+|||++++++.+..
T Consensus 294 fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 294 FDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp EEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 9999999754 3455678999999999999887654
No 199
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.27 E-value=2.3e-11 Score=105.67 Aligned_cols=83 Identities=18% Similarity=0.190 Sum_probs=68.8
Q ss_pred hcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeE
Q psy7837 126 YGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDV 205 (299)
Q Consensus 126 ~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 205 (299)
.....++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++++.. ....+++++++|+..... ..||+
T Consensus 23 ~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~~v~~~~~D~~~~~~--~~fD~ 96 (285)
T 1zq9_A 23 KAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGT----PVASKLQVLVGDVLKTDL--PFFDT 96 (285)
T ss_dssp HTCCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTS----TTGGGEEEEESCTTTSCC--CCCSE
T ss_pred hcCCCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhc----CCCCceEEEEcceecccc--hhhcE
Confidence 345567899999999999999999999999999999999999999988652 122589999999986433 36999
Q ss_pred EEecchhhh
Q psy7837 206 IYISQAIRD 214 (299)
Q Consensus 206 v~~~~~~~~ 214 (299)
|+++.++..
T Consensus 97 vv~nlpy~~ 105 (285)
T 1zq9_A 97 CVANLPYQI 105 (285)
T ss_dssp EEEECCGGG
T ss_pred EEEecCccc
Confidence 999877654
No 200
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.27 E-value=8.6e-12 Score=113.50 Aligned_cols=103 Identities=17% Similarity=0.269 Sum_probs=84.8
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCC-CeEEEEcCCCCCCC----CCCCe
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAE-NFEFVCADGRRGYP----DAAPY 203 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~-~v~~~~~d~~~~~~----~~~~f 203 (299)
.++.+|||+|||+|.++..+++.|+ +|+++|+++.+++.+++|++.+ ... +++++.+|+..... ...+|
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n-----~~~~~v~~~~~d~~~~~~~~~~~~~~f 290 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLN-----GVEDRMKFIVGSAFEEMEKLQKKGEKF 290 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT-----TCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc-----CCCccceEEECCHHHHHHHHHhhCCCC
Confidence 3789999999999999999999865 7999999999999999999884 343 89999999875322 23679
Q ss_pred eEEEecchh---------------hhHHHHHHHhccCCcEEEEEecCCC
Q psy7837 204 DVIYISQAI---------------RDIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 204 D~v~~~~~~---------------~~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
|+|+++++. ..+...+.++|+|||.++++..+..
T Consensus 291 D~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 291 DIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp EEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 999998764 2344678999999999988876654
No 201
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.26 E-value=7.7e-12 Score=118.92 Aligned_cols=98 Identities=15% Similarity=0.151 Sum_probs=81.7
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC--CCCCCCeeEEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG--YPDAAPYDVIY 207 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~v~ 207 (299)
.++.+|||||||.|.++..++++|++|+|+|.++.+++.|+..+.. .+..++++.++++.+. ....++||+|+
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~-----~~~~~~~~~~~~~~~~~~~~~~~~fD~v~ 139 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEE-----NPDFAAEFRVGRIEEVIAALEEGEFDLAI 139 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-----STTSEEEEEECCHHHHHHHCCTTSCSEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHh-----cCCCceEEEECCHHHHhhhccCCCccEEE
Confidence 3467999999999999999999999999999999999999998876 3445899999998753 23347899999
Q ss_pred ecchhhhHHH--------HHHHhccCCcEEEEE
Q psy7837 208 ISQAIRDIPW--------HIVDQLKLGGRMLFI 232 (299)
Q Consensus 208 ~~~~~~~~~~--------~~~~~L~~gG~lv~~ 232 (299)
+..+++|+++ .+.+.|+++|..++.
T Consensus 140 ~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~ 172 (569)
T 4azs_A 140 GLSVFHHIVHLHGIDEVKRLLSRLADVTQAVIL 172 (569)
T ss_dssp EESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEE
T ss_pred ECcchhcCCCHHHHHHHHHHHHHhccccceeeE
Confidence 9999999874 466678887765554
No 202
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.26 E-value=4.2e-11 Score=103.45 Aligned_cols=99 Identities=17% Similarity=0.118 Sum_probs=80.1
Q ss_pred CCCeEEEEcCCC---cHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC---------
Q psy7837 131 YGSKVLDIGSGS---GYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG--------- 196 (299)
Q Consensus 131 ~~~~vLDiG~G~---G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--------- 196 (299)
+..+|||||||+ |.++..+.+. +.+|+++|+|+.+++.+++++.. ..+++++.+|+...
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-------~~~v~~~~~D~~~~~~~~~~~~~ 149 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-------DPNTAVFTADVRDPEYILNHPDV 149 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-------CTTEEEEECCTTCHHHHHHSHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-------CCCeEEEEeeCCCchhhhccchh
Confidence 457999999999 9887766654 68999999999999999998743 35799999998742
Q ss_pred --CCCCCCeeEEEecchhhhH--------HHHHHHhccCCcEEEEEecCC
Q psy7837 197 --YPDAAPYDVIYISQAIRDI--------PWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 197 --~~~~~~fD~v~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~~~ 236 (299)
..+..+||+|++..+++++ .+++.++|+|||+|++.....
T Consensus 150 ~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 150 RRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred hccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 1222479999999888654 358999999999999988665
No 203
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.26 E-value=3.1e-11 Score=96.37 Aligned_cols=100 Identities=16% Similarity=0.117 Sum_probs=78.2
Q ss_pred HhhhcccCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC--
Q psy7837 123 INFYGHLVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY-- 197 (299)
Q Consensus 123 ~~~~~~~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-- 197 (299)
+.......++.+|||+|||+|.++..+++. +.+++++|+++ +++ ..+++++.+|+....
T Consensus 14 ~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~---------------~~~~~~~~~d~~~~~~~ 77 (180)
T 1ej0_A 14 QQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP---------------IVGVDFLQGDFRDELVM 77 (180)
T ss_dssp HHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC---------------CTTEEEEESCTTSHHHH
T ss_pred HHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc---------------cCcEEEEEcccccchhh
Confidence 334445678899999999999999999887 47899999998 532 257899999987643
Q ss_pred ------CCCCCeeEEEecchhh-----------------hHHHHHHHhccCCcEEEEEecCCCC
Q psy7837 198 ------PDAAPYDVIYISQAIR-----------------DIPWHIVDQLKLGGRMLFIKGHEDD 238 (299)
Q Consensus 198 ------~~~~~fD~v~~~~~~~-----------------~~~~~~~~~L~~gG~lv~~~~~~~~ 238 (299)
...++||+|+++.+++ .+.+++.++|+|||.+++.......
T Consensus 78 ~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 78 KALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG 141 (180)
T ss_dssp HHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTT
T ss_pred hhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCc
Confidence 3346899999977642 4557889999999999998766543
No 204
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.26 E-value=6.2e-11 Score=103.96 Aligned_cols=106 Identities=14% Similarity=0.060 Sum_probs=82.7
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC--CCCCeeE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP--DAAPYDV 205 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~fD~ 205 (299)
.++.+|||+|||+|.++..+++. ..+|+++|+++.+++.+++++...... ....+++++.+|+..... ..++||+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRS-LADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGG-GGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcc-cCCCcEEEEECcHHHHHHhccCCceeE
Confidence 45789999999999999999987 468999999999999999987421000 235689999999875332 2478999
Q ss_pred EEecchhh----------hHHHHHHHhccCCcEEEEEecCC
Q psy7837 206 IYISQAIR----------DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 206 v~~~~~~~----------~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
|+++.... .+.+++.++|+|||++++.....
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 213 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESI 213 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 99987532 44578999999999999987654
No 205
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.25 E-value=2.4e-11 Score=105.06 Aligned_cols=105 Identities=17% Similarity=0.137 Sum_probs=83.6
Q ss_pred CCCeEEEEcCCCcHHHHHHHHc-C-CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC-CCCCCeeEEE
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYM-G-AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY-PDAAPYDVIY 207 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~-~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~ 207 (299)
.+.+|||+|||+|.++..+++. + .+|+++|+++.+++.+++++...... ....+++++.+|+.... ...++||+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~-~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGK-LDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTT-TTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccc-cCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 5789999999999999999987 4 68999999999999999987541000 12468999999987532 1236799999
Q ss_pred ecchh----------hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 208 ISQAI----------RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 208 ~~~~~----------~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
++... ..+.+.+.++|+|||++++...++
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~ 192 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNP 192 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCT
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 98754 356789999999999999987553
No 206
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.25 E-value=8.2e-11 Score=105.75 Aligned_cols=100 Identities=13% Similarity=0.106 Sum_probs=82.4
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC--CCCCCeeE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY--PDAAPYDV 205 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~ 205 (299)
.+..+|||||||+|.++..+++. +.+++++|+ +.+++.++++++.. +...+++++.+|+.... .+ ++||+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~~~p-~~~D~ 251 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGL----SGSERIHGHGANLLDRDVPFP-TGFDA 251 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTC----TTGGGEEEEECCCCSSSCCCC-CCCSE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhc----CcccceEEEEccccccCCCCC-CCcCE
Confidence 45789999999999999999885 678999999 99999999998763 23468999999998742 23 67999
Q ss_pred EEecchhhh--------HHHHHHHhccCCcEEEEEecC
Q psy7837 206 IYISQAIRD--------IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 206 v~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~ 235 (299)
|++..++++ +.+++.+.|+|||++++....
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (363)
T 3dp7_A 252 VWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETL 289 (363)
T ss_dssp EEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred EEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeec
Confidence 999888763 346789999999999997643
No 207
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.25 E-value=6.4e-11 Score=106.87 Aligned_cols=100 Identities=16% Similarity=0.125 Sum_probs=82.0
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcC--CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCC--CCCeeE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMG--AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPD--AAPYDV 205 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~fD~ 205 (299)
.++.+|||+| |+|.++..+++.+ .+|+++|+++.+++.++++++.+ +..+++++.+|+....+. .++||+
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~-----g~~~v~~~~~D~~~~l~~~~~~~fD~ 244 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI-----GYEDIEIFTFDLRKPLPDYALHKFDT 244 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH-----TCCCEEEECCCTTSCCCTTTSSCBSE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCEEEEEChhhhhchhhccCCccE
Confidence 4688999999 9999999999886 48999999999999999999873 344899999999874332 358999
Q ss_pred EEecchhh-----hHHHHHHHhccCCc-EEEEEecC
Q psy7837 206 IYISQAIR-----DIPWHIVDQLKLGG-RMLFIKGH 235 (299)
Q Consensus 206 v~~~~~~~-----~~~~~~~~~L~~gG-~lv~~~~~ 235 (299)
|+++.++. .+.+++.++|+||| .+++.+..
T Consensus 245 Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 245 FITDPPETLEAIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp EEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred EEECCCCchHHHHHHHHHHHHHcccCCeEEEEEEec
Confidence 99997753 35578999999999 44666654
No 208
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.25 E-value=1.1e-10 Score=103.49 Aligned_cols=100 Identities=19% Similarity=0.233 Sum_probs=82.5
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDV 205 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 205 (299)
...+ .+|||+|||+|.++..+++. +.+++++|+ +.+++.+++++... ....+++++.+|+....+ .+||+
T Consensus 165 ~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~--~~~D~ 236 (334)
T 2ip2_A 165 DFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSL----LAGERVSLVGGDMLQEVP--SNGDI 236 (334)
T ss_dssp CCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHH----HHTTSEEEEESCTTTCCC--SSCSE
T ss_pred CCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhc----CCCCcEEEecCCCCCCCC--CCCCE
Confidence 3445 89999999999999999876 678999999 99999999987652 334689999999987433 57999
Q ss_pred EEecchhh--------hHHHHHHHhccCCcEEEEEecC
Q psy7837 206 IYISQAIR--------DIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 206 v~~~~~~~--------~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
|++..+++ .+.+++.+.|+|||++++....
T Consensus 237 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 237 YLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 99999886 3446889999999999998643
No 209
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.25 E-value=8.6e-11 Score=105.86 Aligned_cols=100 Identities=25% Similarity=0.305 Sum_probs=82.9
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDV 205 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 205 (299)
...++.+|||+|||+|.++..+++. +.+++++|+ +.+++.+++++... +...+++++.+|+....+. .||+
T Consensus 179 ~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~~--~~D~ 251 (374)
T 1qzz_A 179 DWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADA----GLADRVTVAEGDFFKPLPV--TADV 251 (374)
T ss_dssp CCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT----TCTTTEEEEECCTTSCCSC--CEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhc----CCCCceEEEeCCCCCcCCC--CCCE
Confidence 3467889999999999999999887 568999999 99999999998763 2345899999998764432 4999
Q ss_pred EEecchhhh--------HHHHHHHhccCCcEEEEEec
Q psy7837 206 IYISQAIRD--------IPWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 206 v~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~ 234 (299)
|++..++++ +.+++.++|+|||++++...
T Consensus 252 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 252 VLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999988753 44678999999999998765
No 210
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.24 E-value=7.3e-11 Score=103.42 Aligned_cols=105 Identities=18% Similarity=0.102 Sum_probs=82.0
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcC--CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC-CCCCCeeEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMG--AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY-PDAAPYDVI 206 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v 206 (299)
..+.+|||||||+|.++..+++.. .+|+++|+++.+++.+++++...... ....+++++.+|+.... ...++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~-~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIG-YSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGG-GGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcc-cCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 456899999999999999999874 68999999999999999987541000 12568999999986421 124679999
Q ss_pred Eecchh----------hhHHHHHHHhccCCcEEEEEecC
Q psy7837 207 YISQAI----------RDIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 207 ~~~~~~----------~~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
+++... ..+.+++.++|+|||++++....
T Consensus 173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 997754 23567899999999999998744
No 211
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.24 E-value=1.2e-11 Score=107.41 Aligned_cols=104 Identities=18% Similarity=0.142 Sum_probs=81.5
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcC-CeEEEEeCChHHHHHHHHHHHhcCCccc-------CCCCeEEEEcCCCCCCCCCC
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMG-AKVYAIEHVKNLCKRAMKNIRRGAPAIA-------LAENFEFVCADGRRGYPDAA 201 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~-------~~~~v~~~~~d~~~~~~~~~ 201 (299)
..+.+|||+|||+|.++..+++.+ .+|+++|+++.+++.+++++ ..+.. . ...+++++.+|+.......+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~-l~~~~~~~~~~~v~~~~~D~~~~l~~~~ 151 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNG-LLEAMLNGKHEKAKLTIGDGFEFIKNNR 151 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTT-HHHHHHTTCCSSEEEEESCHHHHHHHCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccc-cccccccCCCCcEEEEECchHHHhcccC
Confidence 456899999999999999999884 57999999999999999987 31000 1 24689999999764221146
Q ss_pred CeeEEEecchh----------hhHHHHHHHhccCCcEEEEEecC
Q psy7837 202 PYDVIYISQAI----------RDIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 202 ~fD~v~~~~~~----------~~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
+||+|+++... ..+.+.+.++|+|||++++....
T Consensus 152 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 152 GFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp CEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 79999998763 34567899999999999998654
No 212
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.24 E-value=1.8e-12 Score=118.73 Aligned_cols=105 Identities=15% Similarity=0.127 Sum_probs=77.5
Q ss_pred HhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCe-EEEEcCCCCCCCCCC
Q psy7837 123 INFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENF-EFVCADGRRGYPDAA 201 (299)
Q Consensus 123 ~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v-~~~~~d~~~~~~~~~ 201 (299)
+.....+.++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.++++- ..... .+...+........+
T Consensus 99 l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~~--------~~~~~~~~~~~~~~~l~~~~~ 170 (416)
T 4e2x_A 99 FLATELTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREKG--------IRVRTDFFEKATADDVRRTEG 170 (416)
T ss_dssp HHHTTTCSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTTT--------CCEECSCCSHHHHHHHHHHHC
T ss_pred HHHHhCCCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHcC--------CCcceeeechhhHhhcccCCC
Confidence 333445568899999999999999999999999999999999999988651 11011 111112111112237
Q ss_pred CeeEEEecchhhhH------HHHHHHhccCCcEEEEEecC
Q psy7837 202 PYDVIYISQAIRDI------PWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 202 ~fD~v~~~~~~~~~------~~~~~~~L~~gG~lv~~~~~ 235 (299)
+||+|++..+++++ .+++.++|||||++++..+.
T Consensus 171 ~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 171 PANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp CEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 89999999998765 36899999999999998764
No 213
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.23 E-value=5.8e-11 Score=105.32 Aligned_cols=101 Identities=17% Similarity=0.279 Sum_probs=83.0
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
.++.+|||+|||+|.++..+++. +.+++++|++ .+++.+++++... +...+++++.+|+.....+ ..||+|+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~~-~~~D~v~ 237 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQ----GVASRYHTIAGSAFEVDYG-NDYDLVL 237 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHH----TCGGGEEEEESCTTTSCCC-SCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhc----CCCcceEEEecccccCCCC-CCCcEEE
Confidence 67789999999999999999887 6789999999 9999999998763 2345799999999864333 3499999
Q ss_pred ecchhhhH--------HHHHHHhccCCcEEEEEecCC
Q psy7837 208 ISQAIRDI--------PWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 208 ~~~~~~~~--------~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+..+++++ .+++.++|+|||++++.....
T Consensus 238 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 238 LPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred EcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 98887644 357899999999999876543
No 214
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.23 E-value=2.3e-11 Score=106.48 Aligned_cols=99 Identities=18% Similarity=0.142 Sum_probs=81.4
Q ss_pred CeEEEEcCCCcHHHHHHHH-c-CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC--CCCCCeeEEEe
Q psy7837 133 SKVLDIGSGSGYLSALFAY-M-GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY--PDAAPYDVIYI 208 (299)
Q Consensus 133 ~~vLDiG~G~G~~~~~la~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~v~~ 208 (299)
.+|||||||+|.++..+++ . +.+++++|+++.+++.+++++.. ....+++++++|+.... ...++||+|++
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~-----~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 165 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDI-----PRAPRVKIRVDDARMVAESFTPASRDVIIR 165 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCC-----CCTTTEEEEESCHHHHHHTCCTTCEEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccc-----cCCCceEEEECcHHHHHhhccCCCCCEEEE
Confidence 4999999999999999998 3 67899999999999999999755 34568999999987532 22468999999
Q ss_pred cchh----------hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 209 SQAI----------RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 209 ~~~~----------~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+... ..+.+.+.++|+|||++++.....
T Consensus 166 D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 166 DVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp CCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 7532 245678999999999999988643
No 215
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.23 E-value=6.2e-11 Score=103.13 Aligned_cols=95 Identities=23% Similarity=0.181 Sum_probs=76.3
Q ss_pred HhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCC
Q psy7837 123 INFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAP 202 (299)
Q Consensus 123 ~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 202 (299)
+.......++.+|||||||+|.++..+++.+.+|+++|+++.+++.+++++.. ..+++++++|+.....+..+
T Consensus 42 Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~-------~~~v~vi~gD~l~~~~~~~~ 114 (295)
T 3gru_A 42 AVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKEL-------YNNIEIIWGDALKVDLNKLD 114 (295)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHH-------CSSEEEEESCTTTSCGGGSC
T ss_pred HHHhcCCCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhcc-------CCCeEEEECchhhCCcccCC
Confidence 33344567789999999999999999999999999999999999999998764 35899999999875444467
Q ss_pred eeEEEecchhhhHHHHHHHhcc
Q psy7837 203 YDVIYISQAIRDIPWHIVDQLK 224 (299)
Q Consensus 203 fD~v~~~~~~~~~~~~~~~~L~ 224 (299)
||.|+++.++....+-+.++|+
T Consensus 115 fD~Iv~NlPy~is~pil~~lL~ 136 (295)
T 3gru_A 115 FNKVVANLPYQISSPITFKLIK 136 (295)
T ss_dssp CSEEEEECCGGGHHHHHHHHHH
T ss_pred ccEEEEeCcccccHHHHHHHHh
Confidence 9999999887655444444443
No 216
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.23 E-value=3.4e-11 Score=103.76 Aligned_cols=105 Identities=22% Similarity=0.271 Sum_probs=76.5
Q ss_pred CCCeEEEEcCCCcH----HHHHHHHc------CCeEEEEeCChHHHHHHHHHHHhcC-----------------C---c-
Q psy7837 131 YGSKVLDIGSGSGY----LSALFAYM------GAKVYAIEHVKNLCKRAMKNIRRGA-----------------P---A- 179 (299)
Q Consensus 131 ~~~~vLDiG~G~G~----~~~~la~~------~~~v~~~D~~~~~~~~a~~~~~~~~-----------------~---~- 179 (299)
++.+|||+|||+|. +++.++.. +.+|+|+|+|+.+++.|++++-... . .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 55555554 3589999999999999998751100 0 0
Q ss_pred -c----cCCCCeEEEEcCCCCC-CCCCCCeeEEEecchhh--------hHHHHHHHhccCCcEEEEEecC
Q psy7837 180 -I----ALAENFEFVCADGRRG-YPDAAPYDVIYISQAIR--------DIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 180 -~----~~~~~v~~~~~d~~~~-~~~~~~fD~v~~~~~~~--------~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
. ....++.|.++|.... ++..++||+|+|.+++. .+.+++.+.|+|||.|++....
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE 254 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSE 254 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTTC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEecc
Confidence 0 0013799999999874 23246899999999874 3446889999999999985543
No 217
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.23 E-value=3.1e-11 Score=105.50 Aligned_cols=105 Identities=22% Similarity=0.097 Sum_probs=80.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC-CCCCCeeEEE
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY-PDAAPYDVIY 207 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~ 207 (299)
.+.+|||+|||+|.++..+++. ..+|+++|+++.+++.+++++...+.. ....+++++.+|+.... ...++||+|+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~-~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCG-FDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGG-GGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccc-cCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 4689999999999999999987 468999999999999999987531000 12468999999976422 1236799999
Q ss_pred ecchhh-----------hHHHHHHHhccCCcEEEEEecCC
Q psy7837 208 ISQAIR-----------DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 208 ~~~~~~-----------~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
++.... .+.+.+.++|+|||++++...++
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 208 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDP 208 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCc
Confidence 876432 45578999999999999986553
No 218
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.22 E-value=2.5e-11 Score=117.73 Aligned_cols=105 Identities=18% Similarity=0.267 Sum_probs=86.1
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCe-EEEEeCChHHHHHHHHHHHhcCCcccCC-CCeEEEEcCCCCCCC-CCCCeeEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAK-VYAIEHVKNLCKRAMKNIRRGAPAIALA-ENFEFVCADGRRGYP-DAAPYDVI 206 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~-v~~~D~~~~~~~~a~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~-~~~~fD~v 206 (299)
.++.+|||+|||+|.+++.+++.|+. |+++|+|+.+++.+++|++.+ +.. .+++++++|+..... ..++||+|
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~n----gl~~~~v~~i~~D~~~~l~~~~~~fD~I 613 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLN----GLTGRAHRLIQADCLAWLREANEQFDLI 613 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT----TCCSTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc----CCCccceEEEecCHHHHHHhcCCCccEE
Confidence 46899999999999999999998875 999999999999999999984 222 489999999875321 23679999
Q ss_pred Eecchh-----------------hhHHHHHHHhccCCcEEEEEecCCCC
Q psy7837 207 YISQAI-----------------RDIPWHIVDQLKLGGRMLFIKGHEDD 238 (299)
Q Consensus 207 ~~~~~~-----------------~~~~~~~~~~L~~gG~lv~~~~~~~~ 238 (299)
+++++. ..+...+.++|+|||+|++++.....
T Consensus 614 i~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~ 662 (703)
T 3v97_A 614 FIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGF 662 (703)
T ss_dssp EECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTC
T ss_pred EECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccc
Confidence 998863 12356788999999999999887543
No 219
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.21 E-value=3.8e-11 Score=102.35 Aligned_cols=79 Identities=19% Similarity=0.198 Sum_probs=64.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC----CCC--CCC
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG----YPD--AAP 202 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~----~~~--~~~ 202 (299)
++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|+++++.+ ....+++++++|+... ... .++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN----NLSDLIKVVKVPQKTLLMDALKEESEII 140 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT----TCTTTEEEEECCTTCSSTTTSTTCCSCC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHc----CCCccEEEEEcchhhhhhhhhhcccCCc
Confidence 5789999999999999988876 689999999999999999999873 2334699999997642 221 257
Q ss_pred eeEEEecchhh
Q psy7837 203 YDVIYISQAIR 213 (299)
Q Consensus 203 fD~v~~~~~~~ 213 (299)
||+|++++++.
T Consensus 141 fD~i~~npp~~ 151 (254)
T 2h00_A 141 YDFCMCNPPFF 151 (254)
T ss_dssp BSEEEECCCCC
T ss_pred ccEEEECCCCc
Confidence 99999996653
No 220
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.21 E-value=2.9e-10 Score=99.68 Aligned_cols=50 Identities=16% Similarity=0.260 Sum_probs=46.4
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+++|++|||+|||+|..|..+++.++..++|+++|+++.+++.+++++.+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r 149 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLAR 149 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 88999999999999999999999987778999999999999998888877
No 221
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.21 E-value=1.8e-10 Score=103.35 Aligned_cols=101 Identities=17% Similarity=0.190 Sum_probs=82.7
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDV 205 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 205 (299)
...++.+|||+|||+|.++..+++. +.+++++|+ +.+++.++++++.. ....+++++.+|+.....+ .+|+
T Consensus 187 ~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~~--~~D~ 259 (359)
T 1x19_A 187 KLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEK----GVADRMRGIAVDIYKESYP--EADA 259 (359)
T ss_dssp CCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT----TCTTTEEEEECCTTTSCCC--CCSE
T ss_pred CCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhc----CCCCCEEEEeCccccCCCC--CCCE
Confidence 4567889999999999999999887 568999999 99999999998773 2345699999999875433 2499
Q ss_pred EEecchhhhH--------HHHHHHhccCCcEEEEEecC
Q psy7837 206 IYISQAIRDI--------PWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 206 v~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~~ 235 (299)
|++..+++++ .+++.++|+|||++++....
T Consensus 260 v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 260 VLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred EEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 9999887643 35789999999999887643
No 222
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.20 E-value=5.9e-11 Score=96.86 Aligned_cols=103 Identities=21% Similarity=0.142 Sum_probs=75.4
Q ss_pred HHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHc-C----------CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeE
Q psy7837 119 YIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYM-G----------AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFE 187 (299)
Q Consensus 119 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~-~----------~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~ 187 (299)
+.+.......+.++.+|||+|||+|.++..+++. + .+|+++|+++.. ...+++
T Consensus 10 l~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----------------~~~~~~ 73 (196)
T 2nyu_A 10 LLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----------------PLEGAT 73 (196)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----------------CCTTCE
T ss_pred HHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----------------cCCCCe
Confidence 3333344445678999999999999999999887 4 689999999831 234688
Q ss_pred EE-EcCCCCCC--------CCCCCeeEEEecchhh-----------------hHHHHHHHhccCCcEEEEEecCCC
Q psy7837 188 FV-CADGRRGY--------PDAAPYDVIYISQAIR-----------------DIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 188 ~~-~~d~~~~~--------~~~~~fD~v~~~~~~~-----------------~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
++ .+|+.... .+.++||+|+++...+ .+.+++.++|+|||.+++......
T Consensus 74 ~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 149 (196)
T 2nyu_A 74 FLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS 149 (196)
T ss_dssp EECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG
T ss_pred EEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Confidence 88 88876421 1235799999865321 345678999999999999876543
No 223
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.20 E-value=1.6e-10 Score=104.68 Aligned_cols=115 Identities=13% Similarity=0.041 Sum_probs=88.6
Q ss_pred HHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcC----------------------------------------CeEEE
Q psy7837 119 YIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMG----------------------------------------AKVYA 158 (299)
Q Consensus 119 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~----------------------------------------~~v~~ 158 (299)
+...+..+....++..|||++||+|.+++.++..+ ..|++
T Consensus 189 lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 268 (393)
T 3k0b_A 189 MAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIG 268 (393)
T ss_dssp HHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEE
Confidence 34445556667788999999999999999888763 34999
Q ss_pred EeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecchhh----------hHHHHHHHhccC--C
Q psy7837 159 IEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQAIR----------DIPWHIVDQLKL--G 226 (299)
Q Consensus 159 ~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~----------~~~~~~~~~L~~--g 226 (299)
+|+++.+++.|++|++.+ +...+++++++|+...... .+||+|++++++. .+...+.+.|++ |
T Consensus 269 vDid~~al~~Ar~Na~~~----gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g 343 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEA----GLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPT 343 (393)
T ss_dssp EESCHHHHHHHHHHHHHT----TCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred EECCHHHHHHHHHHHHHc----CCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCC
Confidence 999999999999999884 3345799999999875544 5899999998852 233445555555 9
Q ss_pred cEEEEEecCCCC
Q psy7837 227 GRMLFIKGHEDD 238 (299)
Q Consensus 227 G~lv~~~~~~~~ 238 (299)
|.+++.++....
T Consensus 344 ~~~~iit~~~~l 355 (393)
T 3k0b_A 344 WSVYVLTSYELF 355 (393)
T ss_dssp CEEEEEECCTTH
T ss_pred CEEEEEECCHHH
Confidence 999998886553
No 224
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.20 E-value=9.9e-11 Score=102.38 Aligned_cols=83 Identities=19% Similarity=0.181 Sum_probs=66.5
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
...++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++++. ....+++++.+|+..... .+||+|+
T Consensus 39 ~~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~-----~~~~~v~~~~~D~~~~~~--~~~D~Vv 111 (299)
T 2h1r_A 39 KIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLY-----EGYNNLEVYEGDAIKTVF--PKFDVCT 111 (299)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHH-----TTCCCEEC----CCSSCC--CCCSEEE
T ss_pred CCCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHH-----cCCCceEEEECchhhCCc--ccCCEEE
Confidence 456789999999999999999999999999999999999999999876 344689999999886543 4799999
Q ss_pred ecchhhhHHH
Q psy7837 208 ISQAIRDIPW 217 (299)
Q Consensus 208 ~~~~~~~~~~ 217 (299)
++.+.....+
T Consensus 112 ~n~py~~~~~ 121 (299)
T 2h1r_A 112 ANIPYKISSP 121 (299)
T ss_dssp EECCGGGHHH
T ss_pred EcCCcccccH
Confidence 9988765443
No 225
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.19 E-value=1.1e-10 Score=107.30 Aligned_cols=117 Identities=17% Similarity=0.181 Sum_probs=87.3
Q ss_pred CcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhccc
Q psy7837 50 SPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHL 129 (299)
Q Consensus 50 ~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 129 (299)
+......+...+. .++|++|||+|||+|..+..+++..+. ++++++|+++..++.+++++..
T Consensus 231 qd~~s~~~~~~l~--~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~--------------- 292 (429)
T 1sqg_A 231 QDASAQGCMTWLA--PQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKR--------------- 292 (429)
T ss_dssp CCHHHHTHHHHHC--CCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHH---------------
T ss_pred eCHHHHHHHHHcC--CCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHH---------------
Confidence 3333334444444 789999999999999999999988753 7888888888888888877766
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC--CCCCCeeEEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY--PDAAPYDVIY 207 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~v~ 207 (299)
.+. ++.++++|+.... ...++||+|+
T Consensus 293 ---------------------------------------------------~g~-~~~~~~~D~~~~~~~~~~~~fD~Vl 320 (429)
T 1sqg_A 293 ---------------------------------------------------LGM-KATVKQGDGRYPSQWCGEQQFDRIL 320 (429)
T ss_dssp ---------------------------------------------------TTC-CCEEEECCTTCTHHHHTTCCEEEEE
T ss_pred ---------------------------------------------------cCC-CeEEEeCchhhchhhcccCCCCEEE
Confidence 222 4788999987643 2336799999
Q ss_pred ecchh----------------------------hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 208 ISQAI----------------------------RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 208 ~~~~~----------------------------~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
++++. ..+.+++.++|||||++++++.+.
T Consensus 321 ~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 321 LDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp EECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred EeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 87643 134567889999999999987544
No 226
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.18 E-value=2.3e-10 Score=102.55 Aligned_cols=101 Identities=23% Similarity=0.294 Sum_probs=83.0
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDV 205 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 205 (299)
...++.+|||+|||+|.++..+++. +.+++++|+ +.+++.+++++... ....+++++.+|+....+. .||+
T Consensus 180 ~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~~--~~D~ 252 (360)
T 1tw3_A 180 DWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDE----GLSDRVDVVEGDFFEPLPR--KADA 252 (360)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHT----TCTTTEEEEECCTTSCCSS--CEEE
T ss_pred CCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhc----CCCCceEEEeCCCCCCCCC--CccE
Confidence 4567889999999999999999877 467999999 99999999998773 2345899999998764433 4999
Q ss_pred EEecchhhh--------HHHHHHHhccCCcEEEEEecC
Q psy7837 206 IYISQAIRD--------IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 206 v~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~ 235 (299)
|++..++++ +.+++.++|+|||++++....
T Consensus 253 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 253 IILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 999888753 446789999999999988654
No 227
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.18 E-value=3.7e-11 Score=105.70 Aligned_cols=106 Identities=20% Similarity=0.110 Sum_probs=81.7
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC-CCCCCeeEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY-PDAAPYDVI 206 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v 206 (299)
..+.+|||||||+|..+..+++. ..+|+++|+++.+++.+++++...... ....+++++.+|+.... ...++||+|
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~-~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCG-FSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGG-GGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccc-cCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 34689999999999999999987 468999999999999999987641000 12468999999987532 134679999
Q ss_pred Eecchh----------hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 207 YISQAI----------RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 207 ~~~~~~----------~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+++... ..+.+.+.++|+|||++++.....
T Consensus 186 i~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~ 225 (314)
T 2b2c_A 186 ITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESV 225 (314)
T ss_dssp EECCC-------------HHHHHHHHEEEEEEEEEECCCT
T ss_pred EEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCc
Confidence 988742 345578999999999999987543
No 228
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.18 E-value=4.3e-11 Score=103.91 Aligned_cols=106 Identities=14% Similarity=0.085 Sum_probs=82.9
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC-CCCCeeEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP-DAAPYDVI 206 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v 206 (299)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++...+.. ....+++++.+|+..... ..++||+|
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~-~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCG-YEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGG-GGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccc-cCCCcEEEEECChHHHHHhCCCCceEE
Confidence 35689999999999999999987 468999999999999999987642100 124689999999875321 14679999
Q ss_pred Eecchh----------hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 207 YISQAI----------RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 207 ~~~~~~----------~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+++... ..+.+.+.++|+|||++++...+.
T Consensus 156 i~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~ 195 (283)
T 2i7c_A 156 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESL 195 (283)
T ss_dssp EEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred EEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCc
Confidence 996532 355678999999999999987643
No 229
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.17 E-value=1.2e-10 Score=104.00 Aligned_cols=102 Identities=18% Similarity=0.189 Sum_probs=82.8
Q ss_pred cCC-CCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC-CCCCee
Q psy7837 129 LVY-GSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP-DAAPYD 204 (299)
Q Consensus 129 ~~~-~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD 204 (299)
..+ +.+|||+|||+|.++..+++. +.+++++|+ +.+++.+++++... ....+++++.+|+..... ..++||
T Consensus 176 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~----~~~~~v~~~~~d~~~~~~~~~~~~D 250 (352)
T 3mcz_A 176 VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAH----DLGGRVEFFEKNLLDARNFEGGAAD 250 (352)
T ss_dssp GGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT----TCGGGEEEEECCTTCGGGGTTCCEE
T ss_pred CcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhc----CCCCceEEEeCCcccCcccCCCCcc
Confidence 445 889999999999999999887 578999999 88999999988763 234579999999886531 225699
Q ss_pred EEEecchhhhH--------HHHHHHhccCCcEEEEEecC
Q psy7837 205 VIYISQAIRDI--------PWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 205 ~v~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~~ 235 (299)
+|++..+++++ .+++.++|+|||++++....
T Consensus 251 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 251 VVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 99999888643 35789999999999997643
No 230
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.17 E-value=4.1e-11 Score=102.76 Aligned_cols=102 Identities=13% Similarity=0.017 Sum_probs=81.3
Q ss_pred CCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQ 210 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 210 (299)
.+.+|||||||+|.++..+++.+.+|+++|+++.+++.+++++...... ....+++++.+|+.... ++||+|+++.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~-~~~~rv~~~~~D~~~~~---~~fD~Ii~d~ 147 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEV-KNNKNFTHAKQLLDLDI---KKYDLIFCLQ 147 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHH-HTCTTEEEESSGGGSCC---CCEEEEEESS
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccc-cCCCeEEEEechHHHHH---hhCCEEEECC
Confidence 4689999999999999988877767999999999999999876431000 12468999999988754 6799999986
Q ss_pred hhh-hHHHHHHHhccCCcEEEEEecCC
Q psy7837 211 AIR-DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 211 ~~~-~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
.-. ...+.+.++|+|||++++.....
T Consensus 148 ~dp~~~~~~~~~~L~pgG~lv~~~~~~ 174 (262)
T 2cmg_A 148 EPDIHRIDGLKRMLKEDGVFISVAKHP 174 (262)
T ss_dssp CCCHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred CChHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 432 35789999999999999986554
No 231
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.17 E-value=3.2e-10 Score=102.34 Aligned_cols=116 Identities=12% Similarity=0.067 Sum_probs=89.8
Q ss_pred HHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcC----------------------------------------CeEE
Q psy7837 118 TYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMG----------------------------------------AKVY 157 (299)
Q Consensus 118 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~----------------------------------------~~v~ 157 (299)
.+...+..+....++..++|.+||+|.+.+.++..+ .+++
T Consensus 181 ~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~ 260 (384)
T 3ldg_A 181 NMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDIS 260 (384)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEE
Confidence 344445556667788999999999999999888653 3499
Q ss_pred EEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecchhh----------hHHHHHHHhccC--
Q psy7837 158 AIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQAIR----------DIPWHIVDQLKL-- 225 (299)
Q Consensus 158 ~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~----------~~~~~~~~~L~~-- 225 (299)
++|+++.+++.|++|++.+ +...+++++++|+.+.... .+||+|++|+++. .+...+.+.||+
T Consensus 261 GvDid~~al~~Ar~Na~~~----gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~ 335 (384)
T 3ldg_A 261 GFDFDGRMVEIARKNAREV----GLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLK 335 (384)
T ss_dssp EEESCHHHHHHHHHHHHHT----TCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCT
T ss_pred EEECCHHHHHHHHHHHHHc----CCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCC
Confidence 9999999999999999884 3445799999999875544 5899999998852 233455566665
Q ss_pred CcEEEEEecCCCC
Q psy7837 226 GGRMLFIKGHEDD 238 (299)
Q Consensus 226 gG~lv~~~~~~~~ 238 (299)
||.+++.++....
T Consensus 336 g~~~~iit~~~~l 348 (384)
T 3ldg_A 336 TWSQFILTNDTDF 348 (384)
T ss_dssp TSEEEEEESCTTH
T ss_pred CcEEEEEECCHHH
Confidence 9999999886653
No 232
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.17 E-value=5.8e-11 Score=104.85 Aligned_cols=106 Identities=14% Similarity=0.084 Sum_probs=82.7
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC-CCCCCeeEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY-PDAAPYDVI 206 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v 206 (299)
.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.+++++...... ....+++++.+|+.... ...++||+|
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~-~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCG-YEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGG-GGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccc-cCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 35689999999999999999987 478999999999999999987641000 12468999999986532 123679999
Q ss_pred Eecchh----------hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 207 YISQAI----------RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 207 ~~~~~~----------~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+++... ..+.+.+.+.|+|||++++...+.
T Consensus 194 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 233 (321)
T 2pt6_A 194 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESL 233 (321)
T ss_dssp EEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred EECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 987631 355678999999999999987544
No 233
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.16 E-value=4.9e-11 Score=105.09 Aligned_cols=106 Identities=19% Similarity=0.145 Sum_probs=81.9
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC-CCCCCeeEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY-PDAAPYDVI 206 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v 206 (299)
..+.+|||||||+|.++..+++. +.+|+++|+++.+++.+++++...+.......+++++.+|+.... ...++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 35689999999999999999987 568999999999999999987531000001468999999987532 124679999
Q ss_pred Eecchhh-------------hHHHHHHHhccCCcEEEEEecC
Q psy7837 207 YISQAIR-------------DIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 207 ~~~~~~~-------------~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
+++...+ .+.+.+.++|+|||++++....
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 9986542 3457899999999999998643
No 234
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.16 E-value=3.4e-10 Score=92.63 Aligned_cols=100 Identities=15% Similarity=0.133 Sum_probs=78.5
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCcH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSGY 144 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~ 144 (299)
+++..+|||+|| ||.|.++++.. +|+++++|.++...+.+++++.+.
T Consensus 28 l~~a~~VLEiGt--GySTl~lA~~~--~g~VvtvE~d~~~~~~ar~~l~~~----------------------------- 74 (202)
T 3cvo_A 28 YEEAEVILEYGS--GGSTVVAAELP--GKHVTSVESDRAWARMMKAWLAAN----------------------------- 74 (202)
T ss_dssp HHHCSEEEEESC--SHHHHHHHTST--TCEEEEEESCHHHHHHHHHHHHHS-----------------------------
T ss_pred hhCCCEEEEECc--hHHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHHHHc-----------------------------
Confidence 567889999998 68999999843 689999999999999999999872
Q ss_pred HHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccC--CCCeEEEEcCCCCC------------------------CC
Q psy7837 145 LSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIAL--AENFEFVCADGRRG------------------------YP 198 (299)
Q Consensus 145 ~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~--~~~v~~~~~d~~~~------------------------~~ 198 (299)
+. ..+++++.+|+... ..
T Consensus 75 ------------------------------------g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~ 118 (202)
T 3cvo_A 75 ------------------------------------PPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTE 118 (202)
T ss_dssp ------------------------------------CCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCT
T ss_pred ------------------------------------CCCCCCceEEEEeCchhhhcccccccchhhhhHHHHhhhhhccc
Confidence 33 56899999986532 11
Q ss_pred CCCCeeEEEecchhh-hHHHHHHHhccCCcEEEEEe
Q psy7837 199 DAAPYDVIYISQAIR-DIPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 199 ~~~~fD~v~~~~~~~-~~~~~~~~~L~~gG~lv~~~ 233 (299)
..++||+|++++... .....+.++|++||++++..
T Consensus 119 ~~~~fDlIfIDg~k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 119 GFRHPDVVLVDGRFRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp TCCCCSEEEECSSSHHHHHHHHHHHCSSCEEEEETT
T ss_pred cCCCCCEEEEeCCCchhHHHHHHHhcCCCeEEEEeC
Confidence 236899999999743 33445779999999997754
No 235
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.16 E-value=5.4e-10 Score=93.24 Aligned_cols=96 Identities=18% Similarity=0.089 Sum_probs=79.8
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEec
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYIS 209 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 209 (299)
.+..+|||+|||+|.++..+. .+..|+++|+++.+++.+++++.. ...+..+.++|.....++ ++||+|++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~------~g~~~~~~v~D~~~~~~~-~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFARE------KDWDFTFALQDVLCAPPA-EAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHH------TTCEEEEEECCTTTSCCC-CBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHh------cCCCceEEEeecccCCCC-CCcchHHHH
Confidence 568899999999999999988 677899999999999999999877 237889999999876655 589999999
Q ss_pred chhhhHHH-------HHHHhccCCcEEEEEec
Q psy7837 210 QAIRDIPW-------HIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 210 ~~~~~~~~-------~~~~~L~~gG~lv~~~~ 234 (299)
-.++.+.+ ++...|+++|.+ ++++
T Consensus 176 k~lh~LE~q~~~~~~~ll~aL~~~~vv-VsfP 206 (253)
T 3frh_A 176 KLLPLLEREQAGSAMALLQSLNTPRMA-VSFP 206 (253)
T ss_dssp SCHHHHHHHSTTHHHHHHHHCBCSEEE-EEEE
T ss_pred HHHHHhhhhchhhHHHHHHHhcCCCEE-EEcC
Confidence 88776653 678888888654 4444
No 236
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.14 E-value=2.9e-10 Score=102.83 Aligned_cols=115 Identities=17% Similarity=0.164 Sum_probs=88.8
Q ss_pred HHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcC----------------------------------------CeEEE
Q psy7837 119 YIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMG----------------------------------------AKVYA 158 (299)
Q Consensus 119 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~----------------------------------------~~v~~ 158 (299)
+...+..+....++..|||++||+|.+++.++..+ ..|+|
T Consensus 183 lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 262 (385)
T 3ldu_A 183 LAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYG 262 (385)
T ss_dssp HHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEE
T ss_pred HHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEE
Confidence 33445556667788999999999999999987763 46999
Q ss_pred EeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEEecchhh----------hHHHHHHHhccC--C
Q psy7837 159 IEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIYISQAIR----------DIPWHIVDQLKL--G 226 (299)
Q Consensus 159 ~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~----------~~~~~~~~~L~~--g 226 (299)
+|+++.+++.|++|++.+ +...++++.++|+.+...+ .+||+|++++++. .+...+.+.|++ |
T Consensus 263 vDid~~ai~~Ar~Na~~~----gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g 337 (385)
T 3ldu_A 263 YDIDEESIDIARENAEIA----GVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKN 337 (385)
T ss_dssp EESCHHHHHHHHHHHHHH----TCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBS
T ss_pred EECCHHHHHHHHHHHHHc----CCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCC
Confidence 999999999999999884 2335899999999875543 5799999999862 222345556665 8
Q ss_pred cEEEEEecCCCC
Q psy7837 227 GRMLFIKGHEDD 238 (299)
Q Consensus 227 G~lv~~~~~~~~ 238 (299)
+.+++.++....
T Consensus 338 ~~~~iit~~~~l 349 (385)
T 3ldu_A 338 WSYYLITSYEDF 349 (385)
T ss_dssp CEEEEEESCTTH
T ss_pred CEEEEEECCHHH
Confidence 999998876543
No 237
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.13 E-value=1.5e-09 Score=89.39 Aligned_cols=93 Identities=19% Similarity=0.224 Sum_probs=74.6
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
..++.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++++.+ .. +++++++|+.... .+||+|+
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~-~~~~~~~d~~~~~---~~~D~v~ 117 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEF-----KG-KFKVFIGDVSEFN---SRVDIVI 117 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG-----TT-SEEEEESCGGGCC---CCCSEEE
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHc-----CC-CEEEEECchHHcC---CCCCEEE
Confidence 45688999999999999999999875 6999999999999999998773 33 8999999988742 4799999
Q ss_pred ecchhh--------hHHHHHHHhccCCcEEEEEe
Q psy7837 208 ISQAIR--------DIPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 208 ~~~~~~--------~~~~~~~~~L~~gG~lv~~~ 233 (299)
++.++. .+.+.+.+.+ |+ +++..
T Consensus 118 ~~~p~~~~~~~~~~~~l~~~~~~l--~~-~~~~~ 148 (207)
T 1wy7_A 118 MNPPFGSQRKHADRPFLLKAFEIS--DV-VYSIH 148 (207)
T ss_dssp ECCCCSSSSTTTTHHHHHHHHHHC--SE-EEEEE
T ss_pred EcCCCccccCCchHHHHHHHHHhc--Cc-EEEEE
Confidence 998753 3445677777 44 44444
No 238
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.13 E-value=7.8e-10 Score=90.64 Aligned_cols=91 Identities=21% Similarity=0.230 Sum_probs=70.5
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
..++.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++ . +++++++|+.... ++||+|+
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~--------~--~~~~~~~d~~~~~---~~~D~v~ 115 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNC--------G--GVNFMVADVSEIS---GKYDTWI 115 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHC--------T--TSEEEECCGGGCC---CCEEEEE
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhc--------C--CCEEEECcHHHCC---CCeeEEE
Confidence 45688999999999999999998876 6999999999999999874 1 7899999988742 6799999
Q ss_pred ecchhhhHH--------HHHHHhccCCcEEEEEecC
Q psy7837 208 ISQAIRDIP--------WHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 208 ~~~~~~~~~--------~~~~~~L~~gG~lv~~~~~ 235 (299)
++.++++.. +++.+.+ |.+++...+
T Consensus 116 ~~~p~~~~~~~~~~~~l~~~~~~~---g~~~~~~~~ 148 (200)
T 1ne2_A 116 MNPPFGSVVKHSDRAFIDKAFETS---MWIYSIGNA 148 (200)
T ss_dssp ECCCC-------CHHHHHHHHHHE---EEEEEEEEG
T ss_pred ECCCchhccCchhHHHHHHHHHhc---CcEEEEEcC
Confidence 999865443 4556665 555555543
No 239
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.12 E-value=5e-11 Score=102.34 Aligned_cols=104 Identities=16% Similarity=0.012 Sum_probs=74.0
Q ss_pred cccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEE--EcCCCCCCCCCCCee
Q psy7837 127 GHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFV--CADGRRGYPDAAPYD 204 (299)
Q Consensus 127 ~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~fD 204 (299)
..+.++.+|||+|||+|.++..+++. .+|+++|+++ ++..++++.... . ....++.++ ++|+.... .++||
T Consensus 70 ~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~~~~~~-~--~~~~~v~~~~~~~D~~~l~--~~~fD 142 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHEVPRIT-E--SYGWNIVKFKSRVDIHTLP--VERTD 142 (265)
T ss_dssp TSCCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCCCCCCC-C--BTTGGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhhhhhhh-h--ccCCCeEEEecccCHhHCC--CCCCc
Confidence 45578899999999999999999988 7899999998 432221110000 0 011278999 89988743 46899
Q ss_pred EEEecchh-------h-----hHHHHHHHhccCCc--EEEEEecCCC
Q psy7837 205 VIYISQAI-------R-----DIPWHIVDQLKLGG--RMLFIKGHED 237 (299)
Q Consensus 205 ~v~~~~~~-------~-----~~~~~~~~~L~~gG--~lv~~~~~~~ 237 (299)
+|+++... . .+.+.+.++|+||| .+++.+..+.
T Consensus 143 ~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~ 189 (265)
T 2oxt_A 143 VIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPY 189 (265)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTT
T ss_pred EEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCC
Confidence 99998651 0 14467889999999 9999776533
No 240
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.11 E-value=5.6e-11 Score=102.64 Aligned_cols=104 Identities=15% Similarity=0.063 Sum_probs=74.2
Q ss_pred cccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEE--EcCCCCCCCCCCCee
Q psy7837 127 GHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFV--CADGRRGYPDAAPYD 204 (299)
Q Consensus 127 ~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~fD 204 (299)
..+.++.+|||+|||+|.++..+++. .+|+++|+++ ++..++++..... ....++.++ ++|+.... .++||
T Consensus 78 ~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~~~~~~~~---~~~~~v~~~~~~~D~~~l~--~~~fD 150 (276)
T 2wa2_A 78 GGVELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGHEKPRLVE---TFGWNLITFKSKVDVTKME--PFQAD 150 (276)
T ss_dssp TSCCCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTSCCCCCCC---CTTGGGEEEECSCCGGGCC--CCCCS
T ss_pred CCCCCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhhhchhhhh---hcCCCeEEEeccCcHhhCC--CCCcC
Confidence 44568899999999999999999998 7899999998 5332221100000 011278999 89987743 46899
Q ss_pred EEEecchh-------h-----hHHHHHHHhccCCc--EEEEEecCCC
Q psy7837 205 VIYISQAI-------R-----DIPWHIVDQLKLGG--RMLFIKGHED 237 (299)
Q Consensus 205 ~v~~~~~~-------~-----~~~~~~~~~L~~gG--~lv~~~~~~~ 237 (299)
+|+++.+. . .+.+.+.++|+||| .+++.+..+.
T Consensus 151 ~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~ 197 (276)
T 2wa2_A 151 TVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPY 197 (276)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCC
T ss_pred EEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCC
Confidence 99998651 0 13567889999999 9998766543
No 241
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.11 E-value=5.2e-10 Score=94.23 Aligned_cols=95 Identities=15% Similarity=0.071 Sum_probs=80.0
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
.+..+|||||||+|.++..++.. ..+|+++|+++.+++.+++++..+ + .+..+.+.|.....++ ++||+++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~-----g-~~~~~~v~D~~~~~p~-~~~DvaL 203 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL-----N-VPHRTNVADLLEDRLD-EPADVTL 203 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT-----T-CCEEEEECCTTTSCCC-SCCSEEE
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc-----C-CCceEEEeeecccCCC-CCcchHH
Confidence 55789999999999999998876 568999999999999999999872 3 4488999998876554 6799999
Q ss_pred ecchhhhHHH-------HHHHhccCCcEEEE
Q psy7837 208 ISQAIRDIPW-------HIVDQLKLGGRMLF 231 (299)
Q Consensus 208 ~~~~~~~~~~-------~~~~~L~~gG~lv~ 231 (299)
++-.++.+.+ ++...|+++|.++-
T Consensus 204 ~lkti~~Le~q~kg~g~~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 204 LLKTLPCLETQQRGSGWEVIDIVNSPNIVVT 234 (281)
T ss_dssp ETTCHHHHHHHSTTHHHHHHHHSSCSEEEEE
T ss_pred HHHHHHHhhhhhhHHHHHHHHHhCCCCEEEe
Confidence 9999987764 68888999887654
No 242
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.10 E-value=7.4e-10 Score=98.91 Aligned_cols=97 Identities=19% Similarity=0.240 Sum_probs=74.1
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDV 205 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 205 (299)
...++.+|||+|||+|.++..+++. +.+++++|++ .++. +++++.. ....+++++.+|+....+ +||+
T Consensus 181 ~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~----~~~~~v~~~~~d~~~~~p---~~D~ 250 (348)
T 3lst_A 181 DFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAP----DVAGRWKVVEGDFLREVP---HADV 250 (348)
T ss_dssp CCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCG----GGTTSEEEEECCTTTCCC---CCSE
T ss_pred CccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--ccccccc----CCCCCeEEEecCCCCCCC---CCcE
Confidence 4567889999999999999999886 4579999994 4443 3322221 345689999999974333 7999
Q ss_pred EEecchhhh--------HHHHHHHhccCCcEEEEEec
Q psy7837 206 IYISQAIRD--------IPWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 206 v~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~ 234 (299)
|++..++++ +.+++.++|||||++++...
T Consensus 251 v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 251 HVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred EEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 999998864 34578999999999999764
No 243
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.09 E-value=4.9e-10 Score=95.56 Aligned_cols=94 Identities=14% Similarity=0.072 Sum_probs=72.5
Q ss_pred HhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCC---
Q psy7837 123 INFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPD--- 199 (299)
Q Consensus 123 ~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--- 199 (299)
+.......++.+|||||||+|.++..+++.+.+|+++|+++.+++.+++++.. ..+++++++|+.....+
T Consensus 21 iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~-------~~~v~~i~~D~~~~~~~~~~ 93 (255)
T 3tqs_A 21 IVSAIHPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ-------QKNITIYQNDALQFDFSSVK 93 (255)
T ss_dssp HHHHHCCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT-------CTTEEEEESCTTTCCGGGSC
T ss_pred HHHhcCCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh-------CCCcEEEEcchHhCCHHHhc
Confidence 33344567789999999999999999999999999999999999999998753 35899999999864332
Q ss_pred -CCCeeEEEecchhhhHHHHHHHhcc
Q psy7837 200 -AAPYDVIYISQAIRDIPWHIVDQLK 224 (299)
Q Consensus 200 -~~~fD~v~~~~~~~~~~~~~~~~L~ 224 (299)
..+|| |+.|.+.....+-+.++|.
T Consensus 94 ~~~~~~-vv~NlPY~is~~il~~ll~ 118 (255)
T 3tqs_A 94 TDKPLR-VVGNLPYNISTPLLFHLFS 118 (255)
T ss_dssp CSSCEE-EEEECCHHHHHHHHHHHHH
T ss_pred cCCCeE-EEecCCcccCHHHHHHHHh
Confidence 25688 7788776544344444443
No 244
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.09 E-value=3.6e-10 Score=100.77 Aligned_cols=99 Identities=15% Similarity=0.133 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcC-------CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCC
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMG-------AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAP 202 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~-------~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 202 (299)
.++.+|||+|||+|.++..+++.. .+++|+|+++.+++.|+.++... +. ++.++++|...... ..+
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~-----g~-~~~i~~~D~l~~~~-~~~ 201 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ-----RQ-KMTLLHQDGLANLL-VDP 201 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH-----TC-CCEEEESCTTSCCC-CCC
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC-----CC-CceEEECCCCCccc-cCC
Confidence 457899999999999999887663 67999999999999999998762 33 68999999876443 367
Q ss_pred eeEEEecchhh------------------------hHHHHHHHhccCCcEEEEEecC
Q psy7837 203 YDVIYISQAIR------------------------DIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 203 fD~v~~~~~~~------------------------~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
||+|++++++. .+...+.+.|+|||++++..+.
T Consensus 202 fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 202 VDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp EEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred ccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 99999998842 2457888999999999998853
No 245
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.08 E-value=1.6e-10 Score=101.27 Aligned_cols=100 Identities=11% Similarity=-0.029 Sum_probs=72.3
Q ss_pred cccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeC----ChHHHHHHHHHHHhcCCcccCCCCeEEEEc-CCCCCCCCCC
Q psy7837 127 GHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEH----VKNLCKRAMKNIRRGAPAIALAENFEFVCA-DGRRGYPDAA 201 (299)
Q Consensus 127 ~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~----~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-d~~~~~~~~~ 201 (299)
..+.++.+|||+|||+|.++..+++. .+|+++|+ ++.+++..+ .+. ....++.++++ |+.... ..
T Consensus 78 ~~~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~--~~~-----~~~~~v~~~~~~D~~~l~--~~ 147 (305)
T 2p41_A 78 NLVTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIP--MST-----YGWNLVRLQSGVDVFFIP--PE 147 (305)
T ss_dssp TSSCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCC--CCS-----TTGGGEEEECSCCTTTSC--CC
T ss_pred CCCCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHH--hhh-----cCCCCeEEEeccccccCC--cC
Confidence 34567899999999999999999998 68999999 554332110 011 12257899998 877643 35
Q ss_pred CeeEEEecchhh------------hHHHHHHHhccCCcEEEEEecCC
Q psy7837 202 PYDVIYISQAIR------------DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 202 ~fD~v~~~~~~~------------~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
+||+|+++.+.. .+...+.++|||||.+++.+...
T Consensus 148 ~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 148 RCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 799999986531 23456779999999999977654
No 246
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.08 E-value=2.2e-10 Score=97.93 Aligned_cols=102 Identities=14% Similarity=0.100 Sum_probs=75.4
Q ss_pred CCCeEEEEcCCC--cHHHHHHHH---cCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC---CC---
Q psy7837 131 YGSKVLDIGSGS--GYLSALFAY---MGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY---PD--- 199 (299)
Q Consensus 131 ~~~~vLDiG~G~--G~~~~~la~---~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~~--- 199 (299)
.-.++||||||+ +.++..+++ .+++|+++|.|+.|++.+++++.. ....+++++++|+.+.. ..
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~-----~~~~~~~~v~aD~~~~~~~l~~~~~ 152 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAS-----TPEGRTAYVEADMLDPASILDAPEL 152 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCC-----CSSSEEEEEECCTTCHHHHHTCHHH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhcc-----CCCCcEEEEEecccChhhhhccccc
Confidence 447899999997 334454443 278999999999999999998865 23457999999998631 00
Q ss_pred CCCee-----EEEecchhhhHH---------HHHHHhccCCcEEEEEecCCC
Q psy7837 200 AAPYD-----VIYISQAIRDIP---------WHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 200 ~~~fD-----~v~~~~~~~~~~---------~~~~~~L~~gG~lv~~~~~~~ 237 (299)
.+.|| .|+++.++++++ .++.+.|+|||+|+++.....
T Consensus 153 ~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 153 RDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp HTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred ccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 13354 577888887553 467888999999999976653
No 247
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.05 E-value=3.6e-09 Score=94.65 Aligned_cols=99 Identities=20% Similarity=0.249 Sum_probs=80.4
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDV 205 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 205 (299)
...+..+|+|||||+|.++..+++. +.+++..|. +.+++.++++++. ....+++++.+|+..... ..+|+
T Consensus 176 ~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~-----~~~~rv~~~~gD~~~~~~--~~~D~ 247 (353)
T 4a6d_A 176 DLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSF-----QEEEQIDFQEGDFFKDPL--PEADL 247 (353)
T ss_dssp CGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC-------CCSEEEEESCTTTSCC--CCCSE
T ss_pred CcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhh-----cccCceeeecCccccCCC--CCceE
Confidence 4566789999999999999999887 567888886 8899999988765 457899999999886543 34899
Q ss_pred EEecchhhhH--------HHHHHHhccCCcEEEEEec
Q psy7837 206 IYISQAIRDI--------PWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 206 v~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~ 234 (299)
+++..+++.+ .+++.+.|+|||++++...
T Consensus 248 ~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 248 YILARVLHDWADGKCSHLLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEe
Confidence 9999988643 4578899999999999764
No 248
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.03 E-value=8.6e-10 Score=91.33 Aligned_cols=88 Identities=16% Similarity=0.091 Sum_probs=70.3
Q ss_pred hcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeE
Q psy7837 126 YGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDV 205 (299)
Q Consensus 126 ~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 205 (299)
+....++.+|||+|||+|.++..+ +.+++++|+++. ++.++.+|+.......++||+
T Consensus 62 l~~~~~~~~vLDiG~G~G~~~~~l---~~~v~~~D~s~~--------------------~~~~~~~d~~~~~~~~~~fD~ 118 (215)
T 2zfu_A 62 LRQRPASLVVADFGCGDCRLASSI---RNPVHCFDLASL--------------------DPRVTVCDMAQVPLEDESVDV 118 (215)
T ss_dssp HHTSCTTSCEEEETCTTCHHHHHC---CSCEEEEESSCS--------------------STTEEESCTTSCSCCTTCEEE
T ss_pred HhccCCCCeEEEECCcCCHHHHHh---hccEEEEeCCCC--------------------CceEEEeccccCCCCCCCEeE
Confidence 334467889999999999998877 478999999874 456788898875555578999
Q ss_pred EEecchhh-----hHHHHHHHhccCCcEEEEEecCC
Q psy7837 206 IYISQAIR-----DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 206 v~~~~~~~-----~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
|++..+++ .+.+++.++|+|||.+++.....
T Consensus 119 v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 119 AVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp EEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred EEEehhccccCHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 99988764 34578999999999999986543
No 249
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.03 E-value=4.7e-10 Score=101.19 Aligned_cols=99 Identities=16% Similarity=0.066 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--C-CeEEEEeCChHHHHHHHHHHHhcCCcccCCC-C-eEEEEcCCCCCCC--CCCC
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--G-AKVYAIEHVKNLCKRAMKNIRRGAPAIALAE-N-FEFVCADGRRGYP--DAAP 202 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~-~-v~~~~~d~~~~~~--~~~~ 202 (299)
.++.+|||++||+|.+++.+++. | ..|+++|+++.+++.+++|++.| ... + ++++.+|+..... ....
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~N-----gl~~~~v~v~~~Da~~~l~~~~~~~ 125 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLN-----NIPEDRYEIHGMEANFFLRKEWGFG 125 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHT-----TCCGGGEEEECSCHHHHHHSCCSSC
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHh-----CCCCceEEEEeCCHHHHHHHhhCCC
Confidence 45789999999999999999884 5 46999999999999999999984 444 4 9999999864321 1357
Q ss_pred eeEEEecch--hhhHHHHHHHhccCCcEEEEEe
Q psy7837 203 YDVIYISQA--IRDIPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 203 fD~v~~~~~--~~~~~~~~~~~L~~gG~lv~~~ 233 (299)
||+|++++. ...+.+.+.+.|++||.+++++
T Consensus 126 fD~V~lDP~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 126 FDYVDLDPFGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcEEEECCCcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 999999983 2357788899999999998876
No 250
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.02 E-value=3.9e-10 Score=101.63 Aligned_cols=103 Identities=14% Similarity=0.043 Sum_probs=81.1
Q ss_pred CCCeEEEEcCCCcHHHHHHHHc-C-CeEEEEeCChHHHHHHHHHHHhcCCcc----------cCCCCeEEEEcCCCCCCC
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYM-G-AKVYAIEHVKNLCKRAMKNIRRGAPAI----------ALAENFEFVCADGRRGYP 198 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~-~-~~v~~~D~~~~~~~~a~~~~~~~~~~~----------~~~~~v~~~~~d~~~~~~ 198 (299)
++.+|||+|||+|..++.+++. + .+|+++|+++.+++.+++|++.+.... ....+++++++|+.....
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 5889999999999999999886 4 579999999999999999998841000 034459999999865321
Q ss_pred C-CCCeeEEEecchh--hhHHHHHHHhccCCcEEEEEe
Q psy7837 199 D-AAPYDVIYISQAI--RDIPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 199 ~-~~~fD~v~~~~~~--~~~~~~~~~~L~~gG~lv~~~ 233 (299)
. ..+||+|++++.. ..+.+.+.+.|++||.+++.+
T Consensus 127 ~~~~~fD~I~lDP~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCCCCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 1 2579999998754 357788899999999988875
No 251
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.02 E-value=1.3e-09 Score=100.55 Aligned_cols=135 Identities=16% Similarity=0.175 Sum_probs=93.9
Q ss_pred cccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHH
Q psy7837 44 HNAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRI 123 (299)
Q Consensus 44 ~~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~ 123 (299)
.|+......+...+++.+. ..++.+|+|.|||+|.+...+++.+.... .+ .. ..+.+
T Consensus 150 ~G~fyTP~~v~~~mv~~l~--~~~~~~VlDpacGsG~fl~~~~~~l~~~~----~~--~~----~~~~~----------- 206 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCIN--PQMGETVCDPACGTGGFLLTAYDYMKGQS----AS--KE----KRDFL----------- 206 (445)
T ss_dssp CGGGCCCHHHHHHHHHHHC--CCTTCCEEETTCTTCHHHHHHHHHHHTCC-----C--CH----HHHHH-----------
T ss_pred CCcccCcHHHHHHHHHHhC--CCCCCEEeccCCCcchHHHHHHHHHHHhc----CC--HH----HHHhh-----------
Confidence 4555555666667777665 67889999999999999988887654311 00 00 00001
Q ss_pred hhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCC--CeEEEEcCCCCCCCCCC
Q psy7837 124 NFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAE--NFEFVCADGRRGYPDAA 201 (299)
Q Consensus 124 ~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~--~v~~~~~d~~~~~~~~~ 201 (299)
.+..++|+|+++.+++.|+.++... +.. +..+.++|....... .
T Consensus 207 ----------------------------~~~~i~G~Ei~~~~~~lA~~nl~l~-----g~~~~~~~i~~gD~l~~~~~-~ 252 (445)
T 2okc_A 207 ----------------------------RDKALHGVDNTPLVVTLASMNLYLH-----GIGTDRSPIVCEDSLEKEPS-T 252 (445)
T ss_dssp ----------------------------HHTTEEEEESCHHHHHHHHHHHHHT-----TCCSSCCSEEECCTTTSCCS-S
T ss_pred ----------------------------cCeEEEEEeCCHHHHHHHHHHHHHh-----CCCcCCCCEeeCCCCCCccc-C
Confidence 1245888888888888888877652 232 677899998764433 4
Q ss_pred CeeEEEecchhh-----------------------hHHHHHHHhccCCcEEEEEecC
Q psy7837 202 PYDVIYISQAIR-----------------------DIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 202 ~fD~v~~~~~~~-----------------------~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
+||+|++++++. .+..++.+.|+|||++++..+.
T Consensus 253 ~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 253 LVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp CEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 799999998753 3457889999999999988754
No 252
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.02 E-value=5.3e-09 Score=88.68 Aligned_cols=83 Identities=23% Similarity=0.236 Sum_probs=66.0
Q ss_pred HHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCC-C
Q psy7837 122 RINFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPD-A 200 (299)
Q Consensus 122 ~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 200 (299)
.+.......++.+|||+|||+|.++..+++.+.+|+++|+++.+++.+++++.. ..+++++++|+...... .
T Consensus 21 ~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~-------~~~v~~~~~D~~~~~~~~~ 93 (244)
T 1qam_A 21 KIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVD-------HDNFQVLNKDILQFKFPKN 93 (244)
T ss_dssp HHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTT-------CCSEEEECCCGGGCCCCSS
T ss_pred HHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhcc-------CCCeEEEEChHHhCCcccC
Confidence 344444567789999999999999999999999999999999999999998743 25899999999875433 2
Q ss_pred CCeeEEEecchh
Q psy7837 201 APYDVIYISQAI 212 (299)
Q Consensus 201 ~~fD~v~~~~~~ 212 (299)
..| .|+++.+.
T Consensus 94 ~~~-~vv~nlPy 104 (244)
T 1qam_A 94 QSY-KIFGNIPY 104 (244)
T ss_dssp CCC-EEEEECCG
T ss_pred CCe-EEEEeCCc
Confidence 345 56666654
No 253
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.01 E-value=7.9e-09 Score=92.93 Aligned_cols=92 Identities=16% Similarity=0.243 Sum_probs=74.1
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVI 206 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 206 (299)
..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+....+ .+ |+|
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~~p-~~--D~v 265 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA-----------FSGVEHLGGDMFDGVP-KG--DAI 265 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTTCCC-CC--SEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh-----------cCCCEEEecCCCCCCC-CC--CEE
Confidence 556789999999999999999885 578999999 887765532 2589999999987443 23 999
Q ss_pred Eecchhhh--------HHHHHHHhccCCcEEEEEecC
Q psy7837 207 YISQAIRD--------IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 207 ~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~ 235 (299)
++..++++ +.+++.++|+|||++++....
T Consensus 266 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 266 FIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp EEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 99998863 346789999999999997643
No 254
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.01 E-value=1.2e-09 Score=93.81 Aligned_cols=78 Identities=19% Similarity=0.152 Sum_probs=65.5
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCC-CCeeEE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDA-APYDVI 206 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~fD~v 206 (299)
...++ +|||||||+|.++..+++.+.+|+++|+++.+++.+++++.. .+++++++|+.....+. ..+|.|
T Consensus 44 ~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~--------~~v~vi~~D~l~~~~~~~~~~~~i 114 (271)
T 3fut_A 44 RPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSG--------LPVRLVFQDALLYPWEEVPQGSLL 114 (271)
T ss_dssp CCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTT--------SSEEEEESCGGGSCGGGSCTTEEE
T ss_pred CCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCC--------CCEEEEECChhhCChhhccCccEE
Confidence 45678 999999999999999999999999999999999999998632 58999999998643332 368999
Q ss_pred Eecchhhh
Q psy7837 207 YISQAIRD 214 (299)
Q Consensus 207 ~~~~~~~~ 214 (299)
+.|.+...
T Consensus 115 v~NlPy~i 122 (271)
T 3fut_A 115 VANLPYHI 122 (271)
T ss_dssp EEEECSSC
T ss_pred EecCcccc
Confidence 99887643
No 255
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.00 E-value=5.9e-09 Score=93.85 Aligned_cols=90 Identities=17% Similarity=0.160 Sum_probs=73.3
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVI 206 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 206 (299)
+.++.+|||+|||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.... + . ||+|
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~~-~-~-~D~v 271 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP-----------LSGIEHVGGDMFASV-P-Q-GDAM 271 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTTCC-C-C-EEEE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh-----------cCCCEEEeCCcccCC-C-C-CCEE
Confidence 566789999999999999999887 457899999 888876542 246999999998733 2 2 9999
Q ss_pred Eecchhhh--------HHHHHHHhccCCcEEEEEe
Q psy7837 207 YISQAIRD--------IPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 207 ~~~~~~~~--------~~~~~~~~L~~gG~lv~~~ 233 (299)
++..++++ +.+++.++|+|||++++..
T Consensus 272 ~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 272 ILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp EEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99998864 3467899999999999874
No 256
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.98 E-value=1.3e-08 Score=91.47 Aligned_cols=92 Identities=18% Similarity=0.205 Sum_probs=74.1
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVI 206 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 206 (299)
..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+....+ .+ |+|
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~D~~~~~p-~~--D~v 263 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ-----------FPGVTHVGGDMFKEVP-SG--DTI 263 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTTCCC-CC--SEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh-----------cCCeEEEeCCcCCCCC-CC--CEE
Confidence 567789999999999999999875 578999999 777765532 3589999999987433 23 999
Q ss_pred EecchhhhH--------HHHHHHhccCCcEEEEEecC
Q psy7837 207 YISQAIRDI--------PWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 207 ~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~~ 235 (299)
++..+++++ .+++.+.|+|||++++....
T Consensus 264 ~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 264 LMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 999988643 45789999999999997543
No 257
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.98 E-value=8.8e-10 Score=98.76 Aligned_cols=96 Identities=15% Similarity=0.102 Sum_probs=71.0
Q ss_pred CCCCCEEEEEccC------CCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEE
Q psy7837 65 LKYGDKVLEIGTG------SGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDI 138 (299)
Q Consensus 65 ~~~g~~vldiG~G------~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDi 138 (299)
..++.+||||||| +|..+..+++...+.++++++|+++.+. .
T Consensus 214 ~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~------------------------ 261 (419)
T 3sso_A 214 RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V------------------------ 261 (419)
T ss_dssp TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G------------------------
T ss_pred cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h------------------------
Confidence 3567899999999 6777777776655567788888877651 1
Q ss_pred cCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCC------CCCeeEEEecchh
Q psy7837 139 GSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPD------AAPYDVIYISQAI 212 (299)
Q Consensus 139 G~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~fD~v~~~~~~ 212 (299)
...+++++++|+.+.... .++||+|+++...
T Consensus 262 -------------------------------------------~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgsH 298 (419)
T 3sso_A 262 -------------------------------------------DELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGSH 298 (419)
T ss_dssp -------------------------------------------CBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSCC
T ss_pred -------------------------------------------cCCCcEEEEecccccchhhhhhcccCCccEEEECCcc
Confidence 235899999998864322 3789999997653
Q ss_pred h-----hHHHHHHHhccCCcEEEEEecC
Q psy7837 213 R-----DIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 213 ~-----~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
. ...+++.++|||||++++....
T Consensus 299 ~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 299 INAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred cchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 1 2346899999999999997544
No 258
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.96 E-value=1.2e-09 Score=99.79 Aligned_cols=115 Identities=21% Similarity=0.200 Sum_probs=81.5
Q ss_pred cccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHH
Q psy7837 44 HNAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRI 123 (299)
Q Consensus 44 ~~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~ 123 (299)
.|+....+.+...+++.+. ..++.+|||+|||+|.++..+++..+...+++|+|+++.+++.+
T Consensus 18 ~g~~~TP~~l~~~~~~~~~--~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------------- 80 (421)
T 2ih2_A 18 LGRVETPPEVVDFMVSLAE--APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------------- 80 (421)
T ss_dssp ---CCCCHHHHHHHHHHCC--CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------------
T ss_pred CceEeCCHHHHHHHHHhhc--cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------------
Confidence 4566666666677777665 35677999999999999999888765445677777666554322
Q ss_pred hhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCe
Q psy7837 124 NFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPY 203 (299)
Q Consensus 124 ~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 203 (299)
.+++++++|...... .++|
T Consensus 81 ------------------------------------------------------------~~~~~~~~D~~~~~~-~~~f 99 (421)
T 2ih2_A 81 ------------------------------------------------------------PWAEGILADFLLWEP-GEAF 99 (421)
T ss_dssp ------------------------------------------------------------TTEEEEESCGGGCCC-SSCE
T ss_pred ------------------------------------------------------------CCCcEEeCChhhcCc-cCCC
Confidence 367889999876433 3689
Q ss_pred eEEEecchhh-----------------------------------hHHHHHHHhccCCcEEEEEecCC
Q psy7837 204 DVIYISQAIR-----------------------------------DIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 204 D~v~~~~~~~-----------------------------------~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
|+|++++++. .+.+.+.++|++||++++..+..
T Consensus 100 D~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 100 DLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT 167 (421)
T ss_dssp EEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred CEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH
Confidence 9999975531 23457889999999999988763
No 259
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.96 E-value=8.5e-10 Score=97.75 Aligned_cols=108 Identities=15% Similarity=0.173 Sum_probs=80.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHcC-CeEEEEeCChHHHHHHHHHHHhcCCcccC---CCCeEEEEcCCCCCCC----CCCC
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYMG-AKVYAIEHVKNLCKRAMKNIRRGAPAIAL---AENFEFVCADGRRGYP----DAAP 202 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~---~~~v~~~~~d~~~~~~----~~~~ 202 (299)
.+++||+||||+|.++..+++.+ .+|+.+|+++.+++.+++++...+..... ..+++++.+|+..... ..++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 57899999999999999998875 46999999999999999997541100001 1379999999886432 2467
Q ss_pred eeEEEecchh------------hhHHHHH----HHhccCCcEEEEEecCCCC
Q psy7837 203 YDVIYISQAI------------RDIPWHI----VDQLKLGGRMLFIKGHEDD 238 (299)
Q Consensus 203 fD~v~~~~~~------------~~~~~~~----~~~L~~gG~lv~~~~~~~~ 238 (299)
||+|+++..- ....+.+ .++|+|||++++.......
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~ 319 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL 319 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcch
Confidence 9999998642 1222344 8999999999998766543
No 260
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.95 E-value=3.9e-11 Score=101.95 Aligned_cols=103 Identities=16% Similarity=0.138 Sum_probs=79.5
Q ss_pred hcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCC-CCCee
Q psy7837 126 YGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPD-AAPYD 204 (299)
Q Consensus 126 ~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD 204 (299)
.....++.+|||+|||+|.++..+++.+.+|+++|+++.+++.+++++.. ..+++++++|+...... .++|
T Consensus 24 ~~~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~-------~~~v~~~~~D~~~~~~~~~~~f- 95 (245)
T 1yub_A 24 QLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKL-------NTRVTLIHQDILQFQFPNKQRY- 95 (245)
T ss_dssp HCCCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTT-------CSEEEECCSCCTTTTCCCSSEE-
T ss_pred hcCCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhcc-------CCceEEEECChhhcCcccCCCc-
Confidence 34556788999999999999999999999999999999999888776532 35899999999875433 2578
Q ss_pred EEEecchhh-------hHH--------------HHHHHhccCCcEEEEEecCC
Q psy7837 205 VIYISQAIR-------DIP--------------WHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 205 ~v~~~~~~~-------~~~--------------~~~~~~L~~gG~lv~~~~~~ 236 (299)
.|+++.+.. ++. +.+.++|+|||.+++.....
T Consensus 96 ~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~~~ 148 (245)
T 1yub_A 96 KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLHTQ 148 (245)
T ss_dssp EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTTTT
T ss_pred EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhheeh
Confidence 677765421 111 45889999999988876554
No 261
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.93 E-value=1.4e-08 Score=90.60 Aligned_cols=91 Identities=14% Similarity=0.246 Sum_probs=74.0
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEE
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVI 206 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 206 (299)
..++.+|||+|||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+....+ .||+|
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~~p---~~D~v 250 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG-----------SNNLTYVGGDMFTSIP---NADAV 250 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----------BTTEEEEECCTTTCCC---CCSEE
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc-----------CCCcEEEeccccCCCC---CccEE
Confidence 456789999999999999999876 578999999 988876643 1359999999876332 39999
Q ss_pred Eecchhhh--------HHHHHHHhccC---CcEEEEEec
Q psy7837 207 YISQAIRD--------IPWHIVDQLKL---GGRMLFIKG 234 (299)
Q Consensus 207 ~~~~~~~~--------~~~~~~~~L~~---gG~lv~~~~ 234 (299)
++..++++ +.+++.++|+| ||++++...
T Consensus 251 ~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 251 LLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred EeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 99998864 34578999999 999998754
No 262
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.92 E-value=2.5e-09 Score=96.77 Aligned_cols=102 Identities=20% Similarity=0.156 Sum_probs=77.2
Q ss_pred CCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCC--CCCeeEEEe
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPD--AAPYDVIYI 208 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~fD~v~~ 208 (299)
++.+|||+|||+|..++.+++.+.+|+++|+++.+++.+++|++.+. .+..+++++++|+...... ..+||+|++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~---~gl~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLL---NEGKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHS---CTTCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhc---cCCCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 48999999999999999999999999999999999999999998720 0347899999998864321 247999999
Q ss_pred cchhhhHH--------------HHHHHhc-cCCcEEEEEecC
Q psy7837 209 SQAIRDIP--------------WHIVDQL-KLGGRMLFIKGH 235 (299)
Q Consensus 209 ~~~~~~~~--------------~~~~~~L-~~gG~lv~~~~~ 235 (299)
+++...-. ..+.+.| .....+++...+
T Consensus 170 DPPrr~~~~grv~~led~~P~l~~~~~~l~~~~~~~~vK~sP 211 (410)
T 3ll7_A 170 DPARRSGADKRVYAIADCEPDLIPLATELLPFCSSILAKLSP 211 (410)
T ss_dssp CCEEC-----CCCCGGGEESCHHHHHHHHGGGSSEEEEEECT
T ss_pred CCCCcCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEEEcCC
Confidence 98753211 2455543 445566666544
No 263
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.88 E-value=6.6e-10 Score=89.18 Aligned_cols=84 Identities=14% Similarity=0.131 Sum_probs=68.5
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC---CCCCee
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP---DAAPYD 204 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~fD 204 (299)
.+.+|.+|||+|||. +.+|+|+.|++.++++... +++++++|+..... +.++||
T Consensus 9 g~~~g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~~---------~~~~~~~d~~~~~~~~~~~~~fD 65 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS--------------SPVEALKGLVDKLQALTGN---------EGRVSVENIKQLLQSAHKESSFD 65 (176)
T ss_dssp TCCTTSEEEEEECTT--------------SCHHHHHHHHHHHHHHTTT---------TSEEEEEEGGGGGGGCCCSSCEE
T ss_pred CCCCCCEEEEecCCc--------------eeeeCCHHHHHHHHHhccc---------CcEEEEechhcCccccCCCCCEe
Confidence 457899999999996 2389999999999987532 58999999886544 457899
Q ss_pred EEEecchhhhH-------HHHHHHhccCCcEEEEEec
Q psy7837 205 VIYISQAIRDI-------PWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 205 ~v~~~~~~~~~-------~~~~~~~L~~gG~lv~~~~ 234 (299)
+|++..+++++ .+++.++|||||++++..+
T Consensus 66 ~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 66 IILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp EEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 99998877654 4689999999999999644
No 264
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.88 E-value=6.6e-10 Score=94.97 Aligned_cols=82 Identities=21% Similarity=0.245 Sum_probs=65.9
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCCh-------HHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCC--
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVK-------NLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYP-- 198 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~-------~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-- 198 (299)
...++.+|||+|||+|..++.+++.+.+|+++|+++ .+++.++++++.+ ....+++++++|+.....
T Consensus 80 ~~~~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~----~~~~ri~~~~~d~~~~l~~~ 155 (258)
T 2r6z_A 80 NHTAHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQ----DTAARINLHFGNAAEQMPAL 155 (258)
T ss_dssp TGGGCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHH----HHHTTEEEEESCHHHHHHHH
T ss_pred CcCCcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhh----CCccCeEEEECCHHHHHHhh
Confidence 445678999999999999999999999999999999 9999999888763 223459999999875322
Q ss_pred CC--CCeeEEEecchhh
Q psy7837 199 DA--APYDVIYISQAIR 213 (299)
Q Consensus 199 ~~--~~fD~v~~~~~~~ 213 (299)
.. ++||+|++++++.
T Consensus 156 ~~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 156 VKTQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHHHCCCSEEEECCCC-
T ss_pred hccCCCccEEEECCCCC
Confidence 11 5799999987543
No 265
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.86 E-value=1.9e-08 Score=97.61 Aligned_cols=114 Identities=19% Similarity=0.206 Sum_probs=85.7
Q ss_pred HHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcC--------------------------------------------Ce
Q psy7837 120 IKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMG--------------------------------------------AK 155 (299)
Q Consensus 120 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~--------------------------------------------~~ 155 (299)
...+..+....++..++|.+||+|.+++.++..+ ..
T Consensus 179 Aa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~ 258 (703)
T 3v97_A 179 AAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSH 258 (703)
T ss_dssp HHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCcc
Confidence 3344445566778899999999999999887642 47
Q ss_pred EEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCC--CCCeeEEEecchhh----------hHHH---HHH
Q psy7837 156 VYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPD--AAPYDVIYISQAIR----------DIPW---HIV 220 (299)
Q Consensus 156 v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~fD~v~~~~~~~----------~~~~---~~~ 220 (299)
++|+|+++.+++.|+.|++.+ +....+++.++|+.....+ .++||+|++|+++- .+.. +..
T Consensus 259 i~G~Did~~av~~A~~N~~~a----gv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~l 334 (703)
T 3v97_A 259 FYGSDSDARVIQRARTNARLA----GIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIM 334 (703)
T ss_dssp EEEEESCHHHHHHHHHHHHHT----TCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHc----CCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHH
Confidence 999999999999999999884 3344699999999864322 23799999998852 1222 344
Q ss_pred HhccCCcEEEEEecCCC
Q psy7837 221 DQLKLGGRMLFIKGHED 237 (299)
Q Consensus 221 ~~L~~gG~lv~~~~~~~ 237 (299)
+.+.+||.+++.++...
T Consensus 335 k~~~~g~~~~ilt~~~~ 351 (703)
T 3v97_A 335 KNQFGGWNLSLFSASPD 351 (703)
T ss_dssp HHHCTTCEEEEEESCHH
T ss_pred HhhCCCCeEEEEeCCHH
Confidence 55568999999987654
No 266
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.85 E-value=9.9e-09 Score=96.71 Aligned_cols=141 Identities=11% Similarity=0.051 Sum_probs=93.1
Q ss_pred cccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHH
Q psy7837 44 HNAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRI 123 (299)
Q Consensus 44 ~~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~ 123 (299)
.|+......+...+++.+. ..++.+|+|.+||+|.+...+++.+...+.-. .+++.. ..+.+
T Consensus 148 ~G~fyTP~~iv~~mv~~l~--p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~-~~~~~~----~~~~~----------- 209 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLLK--PQPREVVQDPAAGTAGFLIEADRYVKSQTNDL-DDLDGD----TQDFQ----------- 209 (541)
T ss_dssp --CCCCCHHHHHHHHHHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTT-TTSCHH----HHHHH-----------
T ss_pred CCeeeCCHHHHHHHHHHhc--cCCCCeEecCCcccchHHHHHHHHHHHhhccc-ccCCHH----HHhhh-----------
Confidence 4666666666667777765 67889999999999999888877653211000 011111 00001
Q ss_pred hhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCC-----eEEEEcCCCCCC-
Q psy7837 124 NFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAEN-----FEFVCADGRRGY- 197 (299)
Q Consensus 124 ~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~-----v~~~~~d~~~~~- 197 (299)
....++|+|+++.+++.|+.++... +..+ ..+.++|.....
T Consensus 210 ----------------------------~~~~i~GiEid~~~~~lA~~nl~l~-----gi~~~~~~~~~I~~gDtL~~~~ 256 (541)
T 2ar0_A 210 ----------------------------IHRAFIGLELVPGTRRLALMNCLLH-----DIEGNLDHGGAIRLGNTLGSDG 256 (541)
T ss_dssp ----------------------------HHTSEEEEESCHHHHHHHHHHHHTT-----TCCCBGGGTBSEEESCTTSHHH
T ss_pred ----------------------------hcceEEEEcCCHHHHHHHHHHHHHh-----CCCccccccCCeEeCCCccccc
Confidence 1245888888888888888887652 3333 778899876422
Q ss_pred CCCCCeeEEEecchhh--------------------hHHHHHHHhccCCcEEEEEecC
Q psy7837 198 PDAAPYDVIYISQAIR--------------------DIPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 198 ~~~~~fD~v~~~~~~~--------------------~~~~~~~~~L~~gG~lv~~~~~ 235 (299)
....+||+|++++++. .+...+.+.|++||++++.+++
T Consensus 257 ~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 257 ENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp HTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred ccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 2236799999998753 2557889999999999998764
No 267
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.83 E-value=8e-09 Score=90.09 Aligned_cols=62 Identities=19% Similarity=0.205 Sum_probs=51.9
Q ss_pred CcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 50 SPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 50 ~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.|-+...+++.|. +++|.+|||+|||+|..+..+++.++ .++++++|+++.+++.+++++..
T Consensus 11 ~pvLl~e~l~~L~--~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~ 72 (301)
T 1m6y_A 11 IPVMVREVIEFLK--PEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKE 72 (301)
T ss_dssp CCTTHHHHHHHHC--CCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGG
T ss_pred cHHHHHHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHh
Confidence 4556778888886 78999999999999999999998875 57888888888888888877655
No 268
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.81 E-value=2.3e-08 Score=86.27 Aligned_cols=89 Identities=18% Similarity=0.103 Sum_probs=68.1
Q ss_pred cccCCCCeEEEEcCCCcHHHHHHHHcCCe----EEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCC--
Q psy7837 127 GHLVYGSKVLDIGSGSGYLSALFAYMGAK----VYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDA-- 200 (299)
Q Consensus 127 ~~~~~~~~vLDiG~G~G~~~~~la~~~~~----v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-- 200 (299)
....++.+|||||||+|.++..+++.+.. |+++|+++.+++.++++. . .+++++++|+.....+.
T Consensus 38 ~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~--------~~v~~i~~D~~~~~~~~~~ 108 (279)
T 3uzu_A 38 IRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-G--------ELLELHAGDALTFDFGSIA 108 (279)
T ss_dssp HCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-G--------GGEEEEESCGGGCCGGGGS
T ss_pred cCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-C--------CCcEEEECChhcCChhHhc
Confidence 34567899999999999999999998777 999999999999999884 2 37999999988643221
Q ss_pred --C--CeeEEEecchhhhHHHHHHHhcc
Q psy7837 201 --A--PYDVIYISQAIRDIPWHIVDQLK 224 (299)
Q Consensus 201 --~--~fD~v~~~~~~~~~~~~~~~~L~ 224 (299)
. ..+.|+.|.+.....+-+.++|.
T Consensus 109 ~~~~~~~~~vv~NlPY~iss~il~~ll~ 136 (279)
T 3uzu_A 109 RPGDEPSLRIIGNLPYNISSPLLFHLMS 136 (279)
T ss_dssp CSSSSCCEEEEEECCHHHHHHHHHHHGG
T ss_pred ccccCCceEEEEccCccccHHHHHHHHh
Confidence 1 24577888776554444555554
No 269
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.79 E-value=1.7e-08 Score=87.36 Aligned_cols=89 Identities=18% Similarity=0.199 Sum_probs=66.5
Q ss_pred cccCCCCeEEEEcCCC------cHHHHHHHHc---CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEE-EEcCCCCC
Q psy7837 127 GHLVYGSKVLDIGSGS------GYLSALFAYM---GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEF-VCADGRRG 196 (299)
Q Consensus 127 ~~~~~~~~vLDiG~G~------G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~-~~~d~~~~ 196 (299)
..+.++.+|||+|||+ |. ..+++. +.+|+++|+++. ..++++ +++|+...
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~------------------v~~v~~~i~gD~~~~ 118 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF------------------VSDADSTLIGDCATV 118 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC------------------BCSSSEEEESCGGGC
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC------------------CCCCEEEEECccccC
Confidence 3567889999999955 55 333433 478999999986 126778 99999875
Q ss_pred CCCCCCeeEEEecchh-----------------hhHHHHHHHhccCCcEEEEEecCC
Q psy7837 197 YPDAAPYDVIYISQAI-----------------RDIPWHIVDQLKLGGRMLFIKGHE 236 (299)
Q Consensus 197 ~~~~~~fD~v~~~~~~-----------------~~~~~~~~~~L~~gG~lv~~~~~~ 236 (299)
... ++||+|+++... ..+.+++.++|||||.+++.....
T Consensus 119 ~~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 119 HTA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp CCS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred Ccc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 433 679999997532 145678999999999999977544
No 270
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.78 E-value=2.1e-07 Score=80.23 Aligned_cols=134 Identities=17% Similarity=0.074 Sum_probs=97.1
Q ss_pred CceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHH
Q psy7837 92 SGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRA 169 (299)
Q Consensus 92 ~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a 169 (299)
+|.+-..+.++.........+.- ......++||-||.|.|..+..+.+. ..+|+.+|+++..++.+
T Consensus 56 Dg~~q~te~De~~YhE~l~h~~l------------~~~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a 123 (294)
T 3o4f_A 56 DGVVQTTERDEFIYHEMMTHVPL------------LAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFC 123 (294)
T ss_dssp TTEEEEETTTHHHHHHHHHHHHH------------HHSSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHH
T ss_pred CCchhhccccHHHHHHHHHHHHH------------hhCCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHH
Confidence 35566666666555544333221 11244689999999999999999987 35799999999999999
Q ss_pred HHHHHhcCCcccCCCCeEEEEcCCCCCCC-CCCCeeEEEecchh----------hhHHHHHHHhccCCcEEEEEecCCC
Q psy7837 170 MKNIRRGAPAIALAENFEFVCADGRRGYP-DAAPYDVIYISQAI----------RDIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 170 ~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~----------~~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
++-+...........+++++.+|+..... ..++||+|+++..- ....+.+.+.|+|||+++.....+.
T Consensus 124 ~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~ 202 (294)
T 3o4f_A 124 RQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCF 202 (294)
T ss_dssp HHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESS
T ss_pred HhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcc
Confidence 99875311111345799999999987543 24689999998642 3456789999999999999865543
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.77 E-value=2.8e-08 Score=84.42 Aligned_cols=92 Identities=16% Similarity=0.172 Sum_probs=68.0
Q ss_pred HhhhcccCCCCeEEEEcCCCcHHHHHHHHcC-CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCC-
Q psy7837 123 INFYGHLVYGSKVLDIGSGSGYLSALFAYMG-AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDA- 200 (299)
Q Consensus 123 ~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~- 200 (299)
+.......++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.++++ . ..+++++++|+.....+.
T Consensus 23 iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~--~-------~~~v~~i~~D~~~~~~~~~ 93 (249)
T 3ftd_A 23 IAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI--G-------DERLEVINEDASKFPFCSL 93 (249)
T ss_dssp HHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS--C-------CTTEEEECSCTTTCCGGGS
T ss_pred HHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc--c-------CCCeEEEEcchhhCChhHc
Confidence 3334455678999999999999999999995 7899999999999999876 2 247999999998643321
Q ss_pred -CCeeEEEecchhhhHHHHHHHhcc
Q psy7837 201 -APYDVIYISQAIRDIPWHIVDQLK 224 (299)
Q Consensus 201 -~~fD~v~~~~~~~~~~~~~~~~L~ 224 (299)
..+ .|+.+.+.....+-+.++|.
T Consensus 94 ~~~~-~vv~NlPy~i~~~il~~ll~ 117 (249)
T 3ftd_A 94 GKEL-KVVGNLPYNVASLIIENTVY 117 (249)
T ss_dssp CSSE-EEEEECCTTTHHHHHHHHHH
T ss_pred cCCc-EEEEECchhccHHHHHHHHh
Confidence 233 77777776544444444443
No 272
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.74 E-value=4.1e-08 Score=87.86 Aligned_cols=90 Identities=18% Similarity=0.280 Sum_probs=71.9
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
.+..+|||+|||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.... + .||+|+
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~~-~--~~D~v~ 256 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG-----------NENLNFVGGDMFKSI-P--SADAVL 256 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC-----------CSSEEEEECCTTTCC-C--CCSEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc-----------CCCcEEEeCccCCCC-C--CceEEE
Confidence 46789999999999999999887 467999999 777765432 246999999988732 2 499999
Q ss_pred ecchhhh--------HHHHHHHhccC---CcEEEEEec
Q psy7837 208 ISQAIRD--------IPWHIVDQLKL---GGRMLFIKG 234 (299)
Q Consensus 208 ~~~~~~~--------~~~~~~~~L~~---gG~lv~~~~ 234 (299)
+..++++ +.+++.++|+| ||++++...
T Consensus 257 ~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 257 LKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred EcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 9998864 34578999999 999998753
No 273
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.70 E-value=1.2e-08 Score=86.85 Aligned_cols=116 Identities=16% Similarity=0.203 Sum_probs=78.2
Q ss_pred eEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCC--CeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHH
Q psy7837 94 KVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYG--SKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMK 171 (299)
Q Consensus 94 ~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~--~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~ 171 (299)
..+.+|+.+......++.....-+. +.....+.++ .+|||++||+|..++.+++.|++|+++|.++.+...+++
T Consensus 53 ~~~~~df~~g~~~~r~~~~~~~~e~----l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~ 128 (258)
T 2oyr_A 53 GGIFVDFVGGAMAHRRKFGGGRGEA----VAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDD 128 (258)
T ss_dssp CEECCCSSSHHHHHHHHHSCGGGSH----HHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHH
T ss_pred CCEEeeccCCHHHHHHhhcCchHHH----HHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHH
Confidence 3567778776654422222111122 2233345567 899999999999999999999999999999998777777
Q ss_pred HHHhcC--Cccc--CCCCeEEEEcCCCCCCC-CCCCeeEEEecchhh
Q psy7837 172 NIRRGA--PAIA--LAENFEFVCADGRRGYP-DAAPYDVIYISQAIR 213 (299)
Q Consensus 172 ~~~~~~--~~~~--~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~ 213 (299)
+++... ...+ ...+++++++|...... ...+||+|++++++.
T Consensus 129 ~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV~lDP~y~ 175 (258)
T 2oyr_A 129 GLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMFP 175 (258)
T ss_dssp HHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEEEECCCCC
T ss_pred HHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEEEEcCCCC
Confidence 765310 0001 11579999999875322 123699999998775
No 274
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.67 E-value=2.6e-08 Score=84.69 Aligned_cols=82 Identities=13% Similarity=0.014 Sum_probs=62.1
Q ss_pred HhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCe--EEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCC
Q psy7837 123 INFYGHLVYGSKVLDIGSGSGYLSALFAYMGAK--VYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDA 200 (299)
Q Consensus 123 ~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~--v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 200 (299)
+.......++.+|||||||+|.++. +++ +.+ |+++|+++.+++.+++++.. ..+++++++|+.......
T Consensus 13 iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~-------~~~v~~i~~D~~~~~~~~ 83 (252)
T 1qyr_A 13 IVSAINPQKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFL-------GPKLTIYQQDAMTFNFGE 83 (252)
T ss_dssp HHHHHCCCTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTT-------GGGEEEECSCGGGCCHHH
T ss_pred HHHhcCCCCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhcc-------CCceEEEECchhhCCHHH
Confidence 3333456778999999999999999 654 667 99999999999999987643 248999999988643211
Q ss_pred -----CCeeEEEecchhh
Q psy7837 201 -----APYDVIYISQAIR 213 (299)
Q Consensus 201 -----~~fD~v~~~~~~~ 213 (299)
+..|.|+.+.+..
T Consensus 84 ~~~~~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 84 LAEKMGQPLRVFGNLPYN 101 (252)
T ss_dssp HHHHHTSCEEEEEECCTT
T ss_pred hhcccCCceEEEECCCCC
Confidence 2347888887753
No 275
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.65 E-value=4.6e-07 Score=85.17 Aligned_cols=127 Identities=17% Similarity=0.071 Sum_probs=88.0
Q ss_pred cccccCCcchHHHHHHHHhcc--CCCCCEEEEEccCCCHHHHHHHHHhCC--CceEEEEeCCHHHHHHHHHHHHHhHHHH
Q psy7837 44 HNAFMESPSDHCLVLELLSGH--LKYGDKVLEIGTGSGYLTTLFGAMVGI--SGKVYTIEHIPELLEAARKRVKAKAETY 119 (299)
Q Consensus 44 ~~~~~~~p~~~~~~~~~l~~~--~~~g~~vldiG~G~G~~~~~la~~~~~--~g~v~~~d~~~~~~~~a~~~l~~~~~~~ 119 (299)
.|++...+.+...|++.+... ..++.+|+|.+||+|.+...+.+.+.. ...++|+|+++..+..|+.++..
T Consensus 196 ~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l----- 270 (542)
T 3lkd_A 196 AGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMIL----- 270 (542)
T ss_dssp CSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHH-----
T ss_pred CCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHH-----
Confidence 466777777777777777633 247889999999999988877776532 23566666666666555554433
Q ss_pred HHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCC--CCeEEEEcCCCCC-
Q psy7837 120 IKRINFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALA--ENFEFVCADGRRG- 196 (299)
Q Consensus 120 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~--~~v~~~~~d~~~~- 196 (299)
.+. .+..+.++|....
T Consensus 271 -------------------------------------------------------------~gi~~~~~~I~~gDtL~~d 289 (542)
T 3lkd_A 271 -------------------------------------------------------------HGVPIENQFLHNADTLDED 289 (542)
T ss_dssp -------------------------------------------------------------TTCCGGGEEEEESCTTTSC
T ss_pred -------------------------------------------------------------cCCCcCccceEecceeccc
Confidence 122 4678899997753
Q ss_pred -C-CCCCCeeEEEecchhh-----------------------------hHHHHHHHhcc-CCcEEEEEecCC
Q psy7837 197 -Y-PDAAPYDVIYISQAIR-----------------------------DIPWHIVDQLK-LGGRMLFIKGHE 236 (299)
Q Consensus 197 -~-~~~~~fD~v~~~~~~~-----------------------------~~~~~~~~~L~-~gG~lv~~~~~~ 236 (299)
+ ....+||+|++|+++. .+...+.+.|+ +||++.+..++.
T Consensus 290 ~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 290 WPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp SCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred ccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 1 2346899999998751 03457889999 999999887753
No 276
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.63 E-value=9.2e-08 Score=90.02 Aligned_cols=138 Identities=19% Similarity=0.143 Sum_probs=88.8
Q ss_pred cccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHH
Q psy7837 44 HNAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRI 123 (299)
Q Consensus 44 ~~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~ 123 (299)
.|++...+.+...|++.+. ..++ +|+|.+||+|.+...+.+.+.. .....
T Consensus 224 ~G~fyTP~~Vv~lmv~ll~--p~~~-~VlDPaCGSG~fLi~a~~~l~~-------------------~~~~~-------- 273 (544)
T 3khk_A 224 GGQYYTPKSIVTLIVEMLE--PYKG-RVYDPAMGSGGFFVSSDKFIEK-------------------HANVK-------- 273 (544)
T ss_dssp STTTCCCHHHHHHHHHHHC--CCSE-EEEESSCTTCHHHHHHHHHHHH-------------------HHHHH--------
T ss_pred CCeEeCCHHHHHHHHHHHh--cCCC-eEeCcccCcCcHHHHHHHHHHH-------------------hcccc--------
Confidence 4677777777777777775 4555 9999999999887776654311 00000
Q ss_pred hhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC-CCCCC
Q psy7837 124 NFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY-PDAAP 202 (299)
Q Consensus 124 ~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~ 202 (299)
+ ....-......++|+|+++.++..|+.|+... +...++.+.++|..... ....+
T Consensus 274 -------------------~-~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~----gi~~~i~i~~gDtL~~~~~~~~~ 329 (544)
T 3khk_A 274 -------------------H-YNASEQKKQISVYGQESNPTTWKLAAMNMVIR----GIDFNFGKKNADSFLDDQHPDLR 329 (544)
T ss_dssp -------------------T-SCHHHHGGGEEEEECCCCHHHHHHHHHHHHHT----TCCCBCCSSSCCTTTSCSCTTCC
T ss_pred -------------------c-cchHHHhhhceEEEEeCCHHHHHHHHHHHHHh----CCCcccceeccchhcCccccccc
Confidence 0 00000111346888888888888888877652 22234444677765432 23468
Q ss_pred eeEEEecchhhh-----------------------------------HHHHHHHhccCCcEEEEEecC
Q psy7837 203 YDVIYISQAIRD-----------------------------------IPWHIVDQLKLGGRMLFIKGH 235 (299)
Q Consensus 203 fD~v~~~~~~~~-----------------------------------~~~~~~~~L~~gG~lv~~~~~ 235 (299)
||+|++|+++.. +...+.+.|++||++++.+++
T Consensus 330 fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 330 ADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLAN 397 (544)
T ss_dssp EEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEET
T ss_pred ccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecc
Confidence 999999987631 345788999999999998765
No 277
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.60 E-value=1.3e-07 Score=76.08 Aligned_cols=58 Identities=21% Similarity=0.315 Sum_probs=50.0
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+.+.+...+++|++|||+|||+|.++..+++. .++|+++|+++.+++.+++++..
T Consensus 9 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~ 66 (185)
T 3mti_A 9 IHMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSD 66 (185)
T ss_dssp HHHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHH
Confidence 34455556666889999999999999999999987 46899999999999999998876
No 278
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.55 E-value=3.3e-07 Score=87.08 Aligned_cols=95 Identities=19% Similarity=0.139 Sum_probs=68.4
Q ss_pred CCCCeEEEEcCCCcHHHHHHH---Hc-CC--eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCe
Q psy7837 130 VYGSKVLDIGSGSGYLSALFA---YM-GA--KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPY 203 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la---~~-~~--~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 203 (299)
..+..|||+|||+|.+....+ .. +. +|+++|-|+. ...+++....| +..++|+++++|+.+...+ ++.
T Consensus 356 ~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N----~~~dkVtVI~gd~eev~LP-EKV 429 (637)
T 4gqb_A 356 TNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFE----EWGSQVTVVSSDMREWVAP-EKA 429 (637)
T ss_dssp TCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHH----TTGGGEEEEESCTTTCCCS-SCE
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhc----cCCCeEEEEeCcceeccCC-ccc
Confidence 445689999999999955443 33 33 5899999974 55666666664 5678999999999975444 679
Q ss_pred eEEEecch-----hh---hHHHHHHHhccCCcEEE
Q psy7837 204 DVIYISQA-----IR---DIPWHIVDQLKLGGRML 230 (299)
Q Consensus 204 D~v~~~~~-----~~---~~~~~~~~~L~~gG~lv 230 (299)
|+|++--. .+ .+.....+.|||||+++
T Consensus 430 DIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 430 DIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred CEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 99997421 12 34456678999999763
No 279
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.55 E-value=3.5e-07 Score=81.42 Aligned_cols=114 Identities=16% Similarity=0.164 Sum_probs=82.5
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEEEcCCCcH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLDIGSGSGY 144 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~ 144 (299)
++||++|||+++|+|.-|..+++.. ..+.+++.|+++.-+...++++.+..
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~-~~~~l~A~D~~~~R~~~l~~~l~r~~---------------------------- 196 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILHSYV---------------------------- 196 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTT-CEEEEEEECSCHHHHHHHHHHHHHHS----------------------------
T ss_pred CCCCCEEEEecCCccHHHHHHHHhc-CCCcEEEEcCCHHHHHHHHHHHHHhh----------------------------
Confidence 8999999999999999999998854 45789999999988888887776620
Q ss_pred HHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC-CCCCCeeEEEecchhh----------
Q psy7837 145 LSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY-PDAAPYDVIYISQAIR---------- 213 (299)
Q Consensus 145 ~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~~~---------- 213 (299)
... .....++.+...|..... ...+.||.|+++++..
T Consensus 197 ----------------------------~~~----~~~~~~v~v~~~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~ 244 (359)
T 4fzv_A 197 ----------------------------PEE----IRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEE 244 (359)
T ss_dssp ----------------------------CTT----TTTSSSEEEECCCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCT
T ss_pred ----------------------------hhh----hccCCceEEEeCchhhcchhccccCCEEEECCccCCCCCcccccC
Confidence 000 012357888888876522 1236799999987632
Q ss_pred --------------------hHHHHHHHhccCCcEEEEEecCCCCc
Q psy7837 214 --------------------DIPWHIVDQLKLGGRMLFIKGHEDDI 239 (299)
Q Consensus 214 --------------------~~~~~~~~~L~~gG~lv~~~~~~~~~ 239 (299)
.+.+...++|||||+||.++-+-...
T Consensus 245 ~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ 290 (359)
T 4fzv_A 245 NNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHL 290 (359)
T ss_dssp TCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTT
T ss_pred hhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchh
Confidence 12246778999999999987554433
No 280
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.52 E-value=3.4e-07 Score=78.22 Aligned_cols=45 Identities=22% Similarity=0.363 Sum_probs=40.9
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHc----CCeEEEEeCChHHHHHHHHHH
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYM----GAKVYAIEHVKNLCKRAMKNI 173 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~----~~~v~~~D~~~~~~~~a~~~~ 173 (299)
+.++.+|||+|||+|.++..+++. +++|+|+|+|+.|++.|++++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~ 116 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHI 116 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHH
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHH
Confidence 578999999999999999999875 678999999999999999873
No 281
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.46 E-value=3.5e-07 Score=78.82 Aligned_cols=66 Identities=20% Similarity=0.281 Sum_probs=56.8
Q ss_pred ccc-ccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHH
Q psy7837 44 HNA-FMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGI-SGKVYTIEHIPELLEAARKR 111 (299)
Q Consensus 44 ~~~-~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~-~g~v~~~d~~~~~~~~a~~~ 111 (299)
.|| +..++.+...+++.+. +.++++|||+|||+|.+|..+++.... +++++++|+++.+++.++++
T Consensus 20 ~GQ~fL~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~ 87 (279)
T 3uzu_A 20 FGQNFLVDHGVIDAIVAAIR--PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQR 87 (279)
T ss_dssp CSCCEECCHHHHHHHHHHHC--CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHH
T ss_pred CCccccCCHHHHHHHHHhcC--CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHh
Confidence 455 4457778888888886 889999999999999999999998765 47799999999999999887
No 282
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.46 E-value=3.3e-07 Score=79.53 Aligned_cols=66 Identities=32% Similarity=0.282 Sum_probs=56.5
Q ss_pred ccc-ccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 44 HNA-FMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 44 ~~~-~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.|| ++..+.+...+++.+. +.++++|||||||+|++|..+++.. .+|+++|+++.+++.+++.+..
T Consensus 28 ~GQnfL~d~~i~~~Iv~~l~--~~~~~~VLEIG~G~G~lT~~La~~~---~~V~aVEid~~li~~a~~~~~~ 94 (295)
T 3gru_A 28 LGQCFLIDKNFVNKAVESAN--LTKDDVVLEIGLGKGILTEELAKNA---KKVYVIEIDKSLEPYANKLKEL 94 (295)
T ss_dssp --CCEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCGGGHHHHHHHHHH
T ss_pred cCccccCCHHHHHHHHHhcC--CCCcCEEEEECCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHhcc
Confidence 466 5678888889988887 8899999999999999999999873 5799999999999999988753
No 283
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.46 E-value=7.1e-07 Score=86.16 Aligned_cols=65 Identities=14% Similarity=0.096 Sum_probs=47.0
Q ss_pred cccccCCcchHHHHHHH----HhccCCCCCEEEEEccCCCHHHHHHHHHhCC--CceEEEEeCCHHHHHHH
Q psy7837 44 HNAFMESPSDHCLVLEL----LSGHLKYGDKVLEIGTGSGYLTTLFGAMVGI--SGKVYTIEHIPELLEAA 108 (299)
Q Consensus 44 ~~~~~~~p~~~~~~~~~----l~~~~~~g~~vldiG~G~G~~~~~la~~~~~--~g~v~~~d~~~~~~~~a 108 (299)
.|+....+.+...|++. +.....++.+|||.|||+|.+...+++.++. ..+++|+|+++.+++.|
T Consensus 294 ~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LA 364 (878)
T 3s1s_A 294 EGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELL 364 (878)
T ss_dssp CBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHH
T ss_pred CceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHH
Confidence 46666667777777666 2223457899999999999999988877642 34577777777766666
No 284
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.46 E-value=5.8e-07 Score=73.80 Aligned_cols=62 Identities=24% Similarity=0.416 Sum_probs=52.4
Q ss_pred cCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 48 MESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 48 ~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+..+.+...+++.+. +.++++|||+|||+|.++..+++. .++++++|+++.+++.+++++..
T Consensus 38 ~~~~~~~~~~l~~l~--~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~ 99 (204)
T 3njr_A 38 ITKSPMRALTLAALA--PRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDT 99 (204)
T ss_dssp CCCHHHHHHHHHHHC--CCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhcC--CCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHH
Confidence 344455566677776 789999999999999999999987 46899999999999999998865
No 285
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.43 E-value=8.9e-07 Score=72.42 Aligned_cols=62 Identities=21% Similarity=0.364 Sum_probs=52.4
Q ss_pred CcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 50 SPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 50 ~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+...+++.+. ++++.+|||+|||+|.++..+++.. +.++++++|+++.+++.+++++..
T Consensus 25 ~~~i~~~~l~~l~--~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~ 86 (204)
T 3e05_A 25 KQEVRAVTLSKLR--LQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKK 86 (204)
T ss_dssp CHHHHHHHHHHTT--CCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcC--CCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHH
Confidence 3344466667765 8899999999999999999999884 467999999999999999998875
No 286
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.43 E-value=4.5e-06 Score=69.13 Aligned_cols=60 Identities=28% Similarity=0.397 Sum_probs=51.3
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...++..+.. ..++.+|||+|||+|+.+..+++.+++.++++++|+++.+++.+++++..
T Consensus 46 ~~~~l~~l~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~ 105 (223)
T 3duw_A 46 QGKFLQLLVQ-IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIER 105 (223)
T ss_dssp HHHHHHHHHH-HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 3555555542 56789999999999999999999987678999999999999999999876
No 287
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.43 E-value=2.3e-06 Score=72.36 Aligned_cols=60 Identities=28% Similarity=0.395 Sum_probs=51.5
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...++..+.. +.++.+|||+|||+|+.+..+++.+++.++++++|+++.+++.+++++..
T Consensus 51 ~~~~l~~l~~-~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 110 (248)
T 3tfw_A 51 QGQFLALLVR-LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQL 110 (248)
T ss_dssp HHHHHHHHHH-HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 3555555542 66789999999999999999999987678999999999999999999876
No 288
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.42 E-value=3e-07 Score=78.24 Aligned_cols=118 Identities=13% Similarity=0.031 Sum_probs=74.3
Q ss_pred CCCCEEEEEccCCCHHHHHHHHHh------CCC-----ceEEEEeCCH---HHHHHHHHHHHHhHHHHHHHHhhhcccCC
Q psy7837 66 KYGDKVLEIGTGSGYLTTLFGAMV------GIS-----GKVYTIEHIP---ELLEAARKRVKAKAETYIKRINFYGHLVY 131 (299)
Q Consensus 66 ~~g~~vldiG~G~G~~~~~la~~~------~~~-----g~v~~~d~~~---~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 131 (299)
+++.+|||+|+|+|+.+..+++.+ .++ .+++++|..+ ..+..+.....
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p------------------ 120 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWP------------------ 120 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCG------------------
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcCh------------------
Confidence 456799999999999999887765 553 4899999877 44444432211
Q ss_pred CCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCc---------ccCCCCeEEEEcCCCCCCCC--C
Q psy7837 132 GSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPA---------IALAENFEFVCADGRRGYPD--A 200 (299)
Q Consensus 132 ~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~---------~~~~~~v~~~~~d~~~~~~~--~ 200 (299)
.+...++++++.+... .....+++++.+|+.+.++. .
T Consensus 121 --------------------------------~l~~~a~~l~~~w~~~~~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~ 168 (257)
T 2qy6_A 121 --------------------------------ELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELISQLDD 168 (257)
T ss_dssp --------------------------------GGHHHHHHHHHTCCCSCSEEEEEEEC--CEEEEEEESCHHHHGGGSCG
T ss_pred --------------------------------hHHHHHHHHHHhccccccchhheeccCCceEEEEEECcHHHHHhhccc
Confidence 1112222222210000 01235788999998753221 1
Q ss_pred ---CCeeEEEecchh---------hhHHHHHHHhccCCcEEEEEe
Q psy7837 201 ---APYDVIYISQAI---------RDIPWHIVDQLKLGGRMLFIK 233 (299)
Q Consensus 201 ---~~fD~v~~~~~~---------~~~~~~~~~~L~~gG~lv~~~ 233 (299)
..||+|+.++.. ..+.+.+.++|+|||+|+..+
T Consensus 169 ~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tys 213 (257)
T 2qy6_A 169 SLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT 213 (257)
T ss_dssp GGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESC
T ss_pred ccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEe
Confidence 279999998632 346679999999999998644
No 289
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.40 E-value=3.2e-06 Score=70.04 Aligned_cols=59 Identities=25% Similarity=0.312 Sum_probs=50.5
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..++..+.. ..++.+|||+|||+|+.+..+++.+++.++++++|+++.+++.+++++..
T Consensus 53 ~~~l~~l~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~ 111 (225)
T 3tr6_A 53 AQLLALLVK-LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEK 111 (225)
T ss_dssp HHHHHHHHH-HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 455555543 56788999999999999999999887678999999999999999999876
No 290
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.39 E-value=1.5e-06 Score=74.81 Aligned_cols=102 Identities=14% Similarity=0.168 Sum_probs=77.9
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHc-------CCeEEEEeCChH--------------------------HHHHHHHHHHh
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYM-------GAKVYAIEHVKN--------------------------LCKRAMKNIRR 175 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~-------~~~v~~~D~~~~--------------------------~~~~a~~~~~~ 175 (299)
....+.|||+|+..|+.++.++.. +.+++++|..+. ..+.++++++.
T Consensus 104 ~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~ 183 (282)
T 2wk1_A 104 NNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRN 183 (282)
T ss_dssp TTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHH
T ss_pred cCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHH
Confidence 345779999999999999887643 567999997521 36678889887
Q ss_pred cCCcccC-CCCeEEEEcCCCCCCC--CCCCeeEEEecchhh----hHHHHHHHhccCCcEEEEEec
Q psy7837 176 GAPAIAL-AENFEFVCADGRRGYP--DAAPYDVIYISQAIR----DIPWHIVDQLKLGGRMLFIKG 234 (299)
Q Consensus 176 ~~~~~~~-~~~v~~~~~d~~~~~~--~~~~fD~v~~~~~~~----~~~~~~~~~L~~gG~lv~~~~ 234 (299)
. +. ..+++++.||+.+..+ ..++||+|++++... ...+.+...|+|||++++...
T Consensus 184 ~----gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 184 Y----DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp T----TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred c----CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 3 23 3799999999875332 236899999998762 235688999999999998765
No 291
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.39 E-value=5e-07 Score=76.83 Aligned_cols=66 Identities=17% Similarity=0.212 Sum_probs=55.2
Q ss_pred cccc-cCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 44 HNAF-MESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 44 ~~~~-~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.||+ ...+.+...+++.+. +.++++|||+|||+|.+|..+++.. ++++++|+++.+++.+++++..
T Consensus 7 ~GQnFL~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~ 73 (255)
T 3tqs_A 7 FGQHFLHDSFVLQKIVSAIH--PQKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQ 73 (255)
T ss_dssp --CCEECCHHHHHHHHHHHC--CCTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTT
T ss_pred CCcccccCHHHHHHHHHhcC--CCCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhh
Confidence 4553 357788888888887 8899999999999999999999864 5799999999999999887753
No 292
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.38 E-value=2.3e-06 Score=71.63 Aligned_cols=63 Identities=24% Similarity=0.339 Sum_probs=50.8
Q ss_pred CCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 49 ESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 49 ~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..|.....+...+. +.++.+|||+|||+|+.+..+++.. +.++++++|+++.+++.+++++..
T Consensus 55 ~~~~~~~~l~~~~~--~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~ 117 (232)
T 3ntv_A 55 VDRLTLDLIKQLIR--MNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLAT 117 (232)
T ss_dssp CCHHHHHHHHHHHH--HHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHh--hcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHH
Confidence 34555444444444 5688999999999999999999843 468999999999999999999876
No 293
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.37 E-value=4.2e-06 Score=70.88 Aligned_cols=113 Identities=12% Similarity=0.021 Sum_probs=73.7
Q ss_pred HHHHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHc-CC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCC
Q psy7837 116 AETYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYM-GA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADG 193 (299)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 193 (299)
+.|+.+.... ..+.++.+|||+|||+|.++..++.. +. .+.++|+...+....... . ....++..+..++
T Consensus 60 A~KL~ei~ek-~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~--~-----~~g~~ii~~~~~~ 131 (277)
T 3evf_A 60 TAKLRWFHER-GYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV--Q-----SLGWNIITFKDKT 131 (277)
T ss_dssp HHHHHHHHHT-TSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC--C-----BTTGGGEEEECSC
T ss_pred HHHHHHHHHh-CCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc--C-----cCCCCeEEEeccc
Confidence 3455555555 56678889999999999999988765 44 588888874331000000 0 0011555566665
Q ss_pred CCCCCCCCCeeEEEecchhh----h--------HHHHHHHhccCC-cEEEEEecCC
Q psy7837 194 RRGYPDAAPYDVIYISQAIR----D--------IPWHIVDQLKLG-GRMLFIKGHE 236 (299)
Q Consensus 194 ~~~~~~~~~fD~v~~~~~~~----~--------~~~~~~~~L~~g-G~lv~~~~~~ 236 (299)
.......++||+|+++.... + +.+.+.++|+|| |.+++.+..+
T Consensus 132 dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~p 187 (277)
T 3evf_A 132 DIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAP 187 (277)
T ss_dssp CTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred eehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 43333457899999988543 2 224567899999 9999988773
No 294
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.35 E-value=6.8e-07 Score=71.16 Aligned_cols=61 Identities=18% Similarity=0.136 Sum_probs=51.6
Q ss_pred cchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 51 PSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 51 p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..+...+++.+. +.++.+|||+|||+|.++..+++.. +..+++++|+++.+++.+++++..
T Consensus 11 ~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~ 71 (178)
T 3hm2_A 11 QHVRALAISALA--PKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAIN 71 (178)
T ss_dssp HHHHHHHHHHHC--CCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc--ccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHH
Confidence 344566666665 7899999999999999999999876 357899999999999999998876
No 295
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.35 E-value=8.6e-07 Score=84.33 Aligned_cols=94 Identities=15% Similarity=0.050 Sum_probs=68.0
Q ss_pred CCeEEEEcCCCcHHHHHH---HH-cC-----------CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC
Q psy7837 132 GSKVLDIGSGSGYLSALF---AY-MG-----------AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG 196 (299)
Q Consensus 132 ~~~vLDiG~G~G~~~~~l---a~-~~-----------~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 196 (299)
+..|||+|||+|.++... ++ .+ .+|+++|.++.+...++..... +...+++++.+|+.+.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~N-----g~~d~VtVI~gd~eev 484 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVR-----TWKRRVTIIESDMRSL 484 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHH-----TTTTCSEEEESCGGGH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhc-----CCCCeEEEEeCchhhc
Confidence 468999999999997432 22 12 3799999999887776666554 5677899999999864
Q ss_pred CCC-----CCCeeEEEecch--------hhhHHHHHHHhccCCcEEE
Q psy7837 197 YPD-----AAPYDVIYISQA--------IRDIPWHIVDQLKLGGRML 230 (299)
Q Consensus 197 ~~~-----~~~fD~v~~~~~--------~~~~~~~~~~~L~~gG~lv 230 (299)
..+ .++.|+|++--. ...+.+.+.+.|||||+++
T Consensus 485 ~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 485 PGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 321 367999997443 1234556678999999754
No 296
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.34 E-value=2.6e-06 Score=67.80 Aligned_cols=61 Identities=21% Similarity=0.345 Sum_probs=51.2
Q ss_pred CCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 49 ESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 49 ~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..+.+...+++.+. +.++.+|||+|||+|.++..+++ ...+++++|+++.+++.+++++..
T Consensus 19 ~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~ 79 (183)
T 2yxd_A 19 TKEEIRAVSIGKLN--LNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAK 79 (183)
T ss_dssp CCHHHHHHHHHHHC--CCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcC--CCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHH
Confidence 34455566666664 78899999999999999999998 456899999999999999998876
No 297
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.33 E-value=1.4e-06 Score=71.48 Aligned_cols=45 Identities=38% Similarity=0.586 Sum_probs=41.7
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHH
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~ 172 (299)
...++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~ 118 (210)
T 3lbf_A 74 ELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRR 118 (210)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHH
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHH
Confidence 457789999999999999999999999999999999999999876
No 298
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.33 E-value=3.1e-06 Score=69.11 Aligned_cols=59 Identities=20% Similarity=0.179 Sum_probs=50.2
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+++.+...+.++.+|||+|||+|.++..+++. ...+++++|+++.+++.+++++..
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~ 105 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAAL 105 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHH
Confidence 45666777666789999999999999999998874 235899999999999999998876
No 299
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.31 E-value=2.3e-06 Score=72.38 Aligned_cols=62 Identities=19% Similarity=0.289 Sum_probs=52.1
Q ss_pred CCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 49 ESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 49 ~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..+.....+++.+. +.++.+|||+|||+|.++..+++..+ .+++++|+++.+++.++++...
T Consensus 20 ~~~~~~~~l~~~~~--~~~~~~VLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~l~~a~~~~~~ 81 (256)
T 1nkv_A 20 FTEEKYATLGRVLR--MKPGTRILDLGSGSGEMLCTWARDHG--ITGTGIDMSSLFTAQAKRRAEE 81 (256)
T ss_dssp CCHHHHHHHHHHTC--CCTTCEEEEETCTTCHHHHHHHHHTC--CEEEEEESCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHh
Confidence 34555566666665 78999999999999999999998874 4899999999999999988865
No 300
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.29 E-value=8.6e-07 Score=75.55 Aligned_cols=59 Identities=17% Similarity=0.155 Sum_probs=50.1
Q ss_pred cchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 51 PSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 51 p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
|.....+++.+. +.++.+|||+|||+|.++..+++.. .+|+++|+++.|++.+++++..
T Consensus 31 ~~~~~~il~~l~--l~~g~~VLDlGcGtG~~a~~La~~g---~~V~gvD~S~~ml~~Ar~~~~~ 89 (261)
T 3iv6_A 31 PSDRENDIFLEN--IVPGSTVAVIGASTRFLIEKALERG---ASVTVFDFSQRMCDDLAEALAD 89 (261)
T ss_dssp CCHHHHHHHTTT--CCTTCEEEEECTTCHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTSS
T ss_pred HHHHHHHHHhcC--CCCcCEEEEEeCcchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHh
Confidence 455567777665 7899999999999999999999864 4799999999999999988754
No 301
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.28 E-value=5.6e-06 Score=73.34 Aligned_cols=74 Identities=14% Similarity=0.154 Sum_probs=60.3
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCCCCeeEEE
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDAAPYDVIY 207 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 207 (299)
.+.+|.+|||+||++|.++..++++|.+|+++|..+-. ... ....+++++++|+....+..+++|+|+
T Consensus 208 ~l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~-~~l-----------~~~~~V~~~~~d~~~~~~~~~~~D~vv 275 (375)
T 4auk_A 208 RLANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMA-QSL-----------MDTGQVTWLREDGFKFRPTRSNISWMV 275 (375)
T ss_dssp HSCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCC-HHH-----------HTTTCEEEECSCTTTCCCCSSCEEEEE
T ss_pred cCCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcC-hhh-----------ccCCCeEEEeCccccccCCCCCcCEEE
Confidence 46789999999999999999999999999999986411 111 134689999999987666667899999
Q ss_pred ecchhh
Q psy7837 208 ISQAIR 213 (299)
Q Consensus 208 ~~~~~~ 213 (299)
++....
T Consensus 276 sDm~~~ 281 (375)
T 4auk_A 276 CDMVEK 281 (375)
T ss_dssp ECCSSC
T ss_pred EcCCCC
Confidence 999764
No 302
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.28 E-value=1.1e-06 Score=74.66 Aligned_cols=61 Identities=16% Similarity=0.116 Sum_probs=50.4
Q ss_pred cCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH
Q psy7837 48 MESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 113 (299)
Q Consensus 48 ~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~ 113 (299)
..+|.+...+++.+. +.++++|||+|||+|.+|. +++ +...+++++|+++.+++.+++++.
T Consensus 4 L~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~-l~~--~~~~~v~avEid~~~~~~a~~~~~ 64 (252)
T 1qyr_A 4 LNDQFVIDSIVSAIN--PQKGQAMVEIGPGLAALTE-PVG--ERLDQLTVIELDRDLAARLQTHPF 64 (252)
T ss_dssp ECCHHHHHHHHHHHC--CCTTCCEEEECCTTTTTHH-HHH--TTCSCEEEECCCHHHHHHHHTCTT
T ss_pred cCCHHHHHHHHHhcC--CCCcCEEEEECCCCcHHHH-hhh--CCCCeEEEEECCHHHHHHHHHHhc
Confidence 456778888888886 8899999999999999999 654 332349999999999998887664
No 303
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.25 E-value=2.6e-06 Score=74.11 Aligned_cols=48 Identities=19% Similarity=0.135 Sum_probs=44.5
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+++|.+|||+|||+|.++..+++..+ .+++++|+++.+++.+++++..
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~ 117 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDE 117 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHH
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHh
Confidence 68999999999999999999999876 5899999999999999998876
No 304
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.24 E-value=1.6e-05 Score=60.68 Aligned_cols=86 Identities=15% Similarity=0.172 Sum_probs=62.8
Q ss_pred CCCCeEEEEcCCCc-HHHHHHHH-cCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCCCCC-CCeeEE
Q psy7837 130 VYGSKVLDIGSGSG-YLSALFAY-MGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGYPDA-APYDVI 206 (299)
Q Consensus 130 ~~~~~vLDiG~G~G-~~~~~la~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~fD~v 206 (299)
.++.+|||+|||+| ..+..+++ .|.+|+++|+++..+ .++..|+..+..+. ..||+|
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av--------------------~~v~dDiF~P~~~~Y~~~DLI 93 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHG--------------------GIVRDDITSPRMEIYRGAALI 93 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSST--------------------TEECCCSSSCCHHHHTTEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCcccc--------------------ceEEccCCCCcccccCCcCEE
Confidence 45789999999999 59999997 899999999987432 17888887644321 479999
Q ss_pred EecchhhhHHHHHHHhcc-CCcEEEEEecC
Q psy7837 207 YISQAIRDIPWHIVDQLK-LGGRMLFIKGH 235 (299)
Q Consensus 207 ~~~~~~~~~~~~~~~~L~-~gG~lv~~~~~ 235 (299)
+...+...+...+.++-+ -|.-+++....
T Consensus 94 YsirPP~El~~~i~~lA~~v~adliI~pL~ 123 (153)
T 2k4m_A 94 YSIRPPAEIHSSLMRVADAVGARLIIKPLT 123 (153)
T ss_dssp EEESCCTTTHHHHHHHHHHHTCEEEEECBT
T ss_pred EEcCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 887777666655555443 36666666443
No 305
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.24 E-value=1.6e-06 Score=73.31 Aligned_cols=60 Identities=22% Similarity=0.260 Sum_probs=49.8
Q ss_pred CCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH
Q psy7837 49 ESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 113 (299)
Q Consensus 49 ~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~ 113 (299)
.++.+...+++.+. +.++++|||+|||+|.++..+++.. ++++++|+++.+++.+++++.
T Consensus 14 ~d~~~~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~ 73 (244)
T 1qam_A 14 TSKHNIDKIMTNIR--LNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLV 73 (244)
T ss_dssp CCHHHHHHHHTTCC--CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhCC--CCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhc
Confidence 45566666666554 6789999999999999999999875 579999999999999887764
No 306
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.23 E-value=2.9e-06 Score=70.60 Aligned_cols=45 Identities=40% Similarity=0.538 Sum_probs=41.2
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHH
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~ 172 (299)
...++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++
T Consensus 67 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~ 111 (231)
T 1vbf_A 67 DLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKL 111 (231)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHH
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHH
Confidence 456788999999999999999999999999999999999998865
No 307
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.23 E-value=2e-06 Score=74.44 Aligned_cols=66 Identities=27% Similarity=0.364 Sum_probs=54.6
Q ss_pred ccccc-CCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 44 HNAFM-ESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 44 ~~~~~-~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.||+. ..+.+...+++.+. +.++++|||+|||+|.++..+++.. .+++++|+++.+++.+++++..
T Consensus 6 ~gq~fl~d~~i~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~ 72 (285)
T 1zq9_A 6 IGQHILKNPLIINSIIDKAA--LRPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQG 72 (285)
T ss_dssp --CCEECCHHHHHHHHHHTC--CCTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTT
T ss_pred CCcCccCCHHHHHHHHHhcC--CCCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHh
Confidence 34544 47778888888876 7899999999999999999999874 4799999999999999987753
No 308
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.23 E-value=1.4e-06 Score=74.60 Aligned_cols=64 Identities=22% Similarity=0.186 Sum_probs=54.7
Q ss_pred cccc-cCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH
Q psy7837 44 HNAF-MESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 113 (299)
Q Consensus 44 ~~~~-~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~ 113 (299)
.||+ ..++.+...+++.+. +.++ +|||+|||+|.+|..+++.. .+|+++|+++.+++.+++++.
T Consensus 25 ~GQnfL~d~~i~~~Iv~~~~--~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~ 89 (271)
T 3fut_A 25 FGQNFLVSEAHLRRIVEAAR--PFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLS 89 (271)
T ss_dssp SSCCEECCHHHHHHHHHHHC--CCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTT
T ss_pred CCccccCCHHHHHHHHHhcC--CCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcC
Confidence 4564 457888888988887 8889 99999999999999999875 479999999999999887664
No 309
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.23 E-value=2.7e-06 Score=68.43 Aligned_cols=59 Identities=10% Similarity=-0.049 Sum_probs=48.7
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..+.....+.+.+.++|||+|||+|-++..++...+. .+++++|+++.+++.+++++..
T Consensus 37 d~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p~-a~~~A~Di~~~~leiar~~~~~ 95 (200)
T 3fzg_A 37 NDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENEK-IIYHAYDIDRAEIAFLSSIIGK 95 (200)
T ss_dssp HHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSCC-CEEEEECSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCCC-CEEEEEeCCHHHHHHHHHHHHh
Confidence 3444444555788999999999999999998776544 4999999999999999999876
No 310
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.22 E-value=1.5e-06 Score=72.24 Aligned_cols=50 Identities=32% Similarity=0.509 Sum_probs=45.4
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
++++++|||+|||+|.++..+++.+++.++++++|+++.+++.++++...
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~ 120 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE 120 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc
Confidence 67899999999999999999999988778999999999999988877654
No 311
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.22 E-value=2.3e-06 Score=70.09 Aligned_cols=52 Identities=17% Similarity=0.046 Sum_probs=43.4
Q ss_pred HHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Q psy7837 56 LVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRV 112 (299)
Q Consensus 56 ~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l 112 (299)
..++.+. +.++.+|||+|||+|..+..+++. + .+|+|+|+++.+++.+++..
T Consensus 13 ~~~~~l~--~~~~~~vLD~GCG~G~~~~~la~~-g--~~V~gvD~S~~~l~~a~~~~ 64 (203)
T 1pjz_A 13 QYWSSLN--VVPGARVLVPLCGKSQDMSWLSGQ-G--YHVVGAELSEAAVERYFTER 64 (203)
T ss_dssp HHHHHHC--CCTTCEEEETTTCCSHHHHHHHHH-C--CEEEEEEECHHHHHHHHHHH
T ss_pred HHHHhcc--cCCCCEEEEeCCCCcHhHHHHHHC-C--CeEEEEeCCHHHHHHHHHHc
Confidence 3444443 678999999999999999999986 3 37999999999999998765
No 312
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.21 E-value=2.3e-06 Score=74.54 Aligned_cols=69 Identities=26% Similarity=0.310 Sum_probs=54.4
Q ss_pred cccccccc-CCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 41 NIGHNAFM-ESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 41 ~~~~~~~~-~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
....||.. .++.+...+++.+. +.++++|||+|||+|.++..+++. .++++++|+++.+++.+++++..
T Consensus 17 ~k~~Gq~fl~~~~i~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~ 86 (299)
T 2h1r_A 17 LYFQGQHLLKNPGILDKIIYAAK--IKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLY 86 (299)
T ss_dssp ------CEECCHHHHHHHHHHHC--CCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHH
T ss_pred hhccccceecCHHHHHHHHHhcC--CCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHH
Confidence 33456655 47778888888876 789999999999999999999876 35899999999999999988764
No 313
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.21 E-value=2e-06 Score=72.28 Aligned_cols=45 Identities=24% Similarity=0.284 Sum_probs=40.7
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCC--eEEEEeCChHHHHHHHHHH
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGA--KVYAIEHVKNLCKRAMKNI 173 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~--~v~~~D~~~~~~~~a~~~~ 173 (299)
+.++.+|||+|||+|++++.+++.+. +|+++|+++.+++.|++|+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~ 65 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQV 65 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 46788999999999999999999863 6999999999999999984
No 314
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.21 E-value=2.1e-06 Score=71.33 Aligned_cols=45 Identities=31% Similarity=0.420 Sum_probs=40.6
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcC--CeEEEEeCChHHHHHHHHHH
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMG--AKVYAIEHVKNLCKRAMKNI 173 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~--~~v~~~D~~~~~~~~a~~~~ 173 (299)
+.++.+|||+|||+|++++.+++.+ .+|+++|+++.+++.|++|+
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~ 59 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNV 59 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 4567899999999999999999986 36999999999999999984
No 315
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.21 E-value=5.8e-06 Score=65.10 Aligned_cols=59 Identities=15% Similarity=0.114 Sum_probs=47.6
Q ss_pred hHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 53 DHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 53 ~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+...+++.+...+.++.+|||+|||+|.++..+++... .++++|+++.+++.+++++..
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~ 85 (171)
T 1ws6_A 27 LRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRR 85 (171)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHH
Confidence 44555666553344889999999999999999998743 399999999999999998876
No 316
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.19 E-value=2.6e-06 Score=71.23 Aligned_cols=45 Identities=16% Similarity=0.369 Sum_probs=40.5
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHH
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~ 172 (299)
.+.||.+|||+|||+|+++..+++. ..+|+++|+++.+++.++++
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~ 121 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTV 121 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHH
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHh
Confidence 5789999999999999999999987 35799999999999988764
No 317
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.19 E-value=2.6e-06 Score=72.80 Aligned_cols=58 Identities=34% Similarity=0.481 Sum_probs=49.5
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHH------HHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPE------LLEAARKRVKA 114 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~------~~~~a~~~l~~ 114 (299)
..+++.+. ++++.+|||+|||+|.++..+++..++.++++++|+++. +++.+++++..
T Consensus 33 ~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~ 96 (275)
T 3bkx_A 33 LAIAEAWQ--VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLA 96 (275)
T ss_dssp HHHHHHHT--CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHT
T ss_pred HHHHHHcC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHh
Confidence 44555554 789999999999999999999999877789999999997 88988888765
No 318
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.19 E-value=1.2e-06 Score=74.23 Aligned_cols=64 Identities=27% Similarity=0.356 Sum_probs=53.5
Q ss_pred ccc-ccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHH
Q psy7837 44 HNA-FMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKR 111 (299)
Q Consensus 44 ~~~-~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~ 111 (299)
.|| +..++.+...+++.+. +.++++|||+|||+|.+|..+++. + ..+++++|+++.+++.++++
T Consensus 9 ~GQnfl~d~~i~~~iv~~~~--~~~~~~VLDiG~G~G~lt~~L~~~-~-~~~v~avEid~~~~~~~~~~ 73 (249)
T 3ftd_A 9 FGQHLLVSEGVLKKIAEELN--IEEGNTVVEVGGGTGNLTKVLLQH-P-LKKLYVIELDREMVENLKSI 73 (249)
T ss_dssp CCSSCEECHHHHHHHHHHTT--CCTTCEEEEEESCHHHHHHHHTTS-C-CSEEEEECCCHHHHHHHTTS
T ss_pred ccccccCCHHHHHHHHHhcC--CCCcCEEEEEcCchHHHHHHHHHc-C-CCeEEEEECCHHHHHHHHhc
Confidence 455 4456778888888876 788999999999999999999876 2 36899999999999988765
No 319
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.18 E-value=3.8e-06 Score=68.98 Aligned_cols=59 Identities=27% Similarity=0.333 Sum_probs=49.4
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..++..+.. ..++.+|||+|||+|+.+..+++.+++.++++++|+++.+++.+++++..
T Consensus 45 ~~~l~~l~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~ 103 (210)
T 3c3p_A 45 GRLLYLLAR-IKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHD 103 (210)
T ss_dssp HHHHHHHHH-HHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 445555442 45678999999999999999999886678999999999999999998875
No 320
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.17 E-value=2.9e-06 Score=75.47 Aligned_cols=107 Identities=16% Similarity=0.171 Sum_probs=78.2
Q ss_pred CCCeEEEEcCCCcHHHHHHHHcC-CeEEEEeCChHHHHHHHHHHHhcCCcc---cCCCCeEEEEcCCCCCC----CCCCC
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYMG-AKVYAIEHVKNLCKRAMKNIRRGAPAI---ALAENFEFVCADGRRGY----PDAAP 202 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~---~~~~~v~~~~~d~~~~~----~~~~~ 202 (299)
+.++||-||.|.|.....+.+.. .+|+.+|+++..++.+++.+....... ....+++++.+|+.... ...++
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 56899999999999999998874 569999999999999998764311000 11246899999987532 12367
Q ss_pred eeEEEecchh----------------hhHHHHHHHhccCCcEEEEEecCCC
Q psy7837 203 YDVIYISQAI----------------RDIPWHIVDQLKLGGRMLFIKGHED 237 (299)
Q Consensus 203 fD~v~~~~~~----------------~~~~~~~~~~L~~gG~lv~~~~~~~ 237 (299)
||+|+.+..- ..+.+.+.+.|+|||+++.......
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~ 335 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVN 335 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETT
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCc
Confidence 9999988421 1233578899999999998765443
No 321
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.17 E-value=2.9e-06 Score=70.67 Aligned_cols=45 Identities=33% Similarity=0.492 Sum_probs=40.7
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHcCC--eEEEEeCChHHHHHHHHHH
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYMGA--KVYAIEHVKNLCKRAMKNI 173 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~~~--~v~~~D~~~~~~~~a~~~~ 173 (299)
+.++.+|+|+|||+|++++.+++.+. +|+++|+++.+++.|++|+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~ 65 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNV 65 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 45788999999999999999999863 6999999999999999984
No 322
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.17 E-value=5.8e-06 Score=65.77 Aligned_cols=59 Identities=14% Similarity=0.110 Sum_probs=48.2
Q ss_pred hHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 53 DHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 53 ~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+...+++.+.. ..++.+|||+|||+|.++..+++. ...+++++|+++.+++.+++++..
T Consensus 18 ~~~~~~~~l~~-~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~ 76 (177)
T 2esr_A 18 VRGAIFNMIGP-YFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIM 76 (177)
T ss_dssp CHHHHHHHHCS-CCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHh-hcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHH
Confidence 34555555542 567899999999999999998876 236899999999999999998875
No 323
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.17 E-value=2.8e-06 Score=70.08 Aligned_cols=44 Identities=23% Similarity=0.312 Sum_probs=37.8
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcC--CeEEEEeCChHHHHHHHH
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMG--AKVYAIEHVKNLCKRAMK 171 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~--~~v~~~D~~~~~~~~a~~ 171 (299)
.+.++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.+.+
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~ 99 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLE 99 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHH
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHH
Confidence 45678999999999999999998774 689999999999876653
No 324
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.16 E-value=2.5e-06 Score=72.42 Aligned_cols=113 Identities=14% Similarity=-0.015 Sum_probs=71.5
Q ss_pred HHHHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHc-CC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCC
Q psy7837 116 AETYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYM-GA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADG 193 (299)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 193 (299)
+-|+.+..... .+.++.+|||+|||.|.++..++.. +. .|+++|+...+...+... + ....++.....+.
T Consensus 76 AfKL~ei~eK~-~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~------~~g~~ii~~~~~~ 147 (282)
T 3gcz_A 76 SAKLRWMEERG-YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-T------TLGWNLIRFKDKT 147 (282)
T ss_dssp HHHHHHHHHTT-SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-C------BTTGGGEEEECSC
T ss_pred HHHHHHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-c------cCCCceEEeeCCc
Confidence 44555555444 6778899999999999999988854 54 489999975432111100 0 0112333344332
Q ss_pred CCCCCCCCCeeEEEecchhh----h--------HHHHHHHhccCC--cEEEEEecCC
Q psy7837 194 RRGYPDAAPYDVIYISQAIR----D--------IPWHIVDQLKLG--GRMLFIKGHE 236 (299)
Q Consensus 194 ~~~~~~~~~fD~v~~~~~~~----~--------~~~~~~~~L~~g--G~lv~~~~~~ 236 (299)
........++|+|+++.... . +.+-+..+|+|| |.+++.+..+
T Consensus 148 dv~~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~p 204 (282)
T 3gcz_A 148 DVFNMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCP 204 (282)
T ss_dssp CGGGSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCC
T ss_pred chhhcCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecC
Confidence 22122346899999998753 1 223456899999 9999998773
No 325
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.16 E-value=1.9e-05 Score=74.07 Aligned_cols=136 Identities=17% Similarity=0.102 Sum_probs=87.3
Q ss_pred cccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHH
Q psy7837 44 HNAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRI 123 (299)
Q Consensus 44 ~~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~ 123 (299)
.|++...+.+...|++.+. ..+|++|+|-+||+|.+-..+.+.+..... .. ..++.
T Consensus 196 ~GqfyTP~~Vv~lmv~l~~--p~~~~~I~DPacGsGgfL~~a~~~l~~~~~------~~----~~~~~------------ 251 (530)
T 3ufb_A 196 SGEFYTPRPVVRFMVEVMD--PQLGESVLDPACGTGGFLVEAFEHLERQCK------TV----EDREV------------ 251 (530)
T ss_dssp CCCCCCCHHHHHHHHHHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTCC------SH----HHHHH------------
T ss_pred CceECCcHHHHHHHHHhhc--cCCCCEEEeCCCCcchHHHHHHHHHHHhcc------ch----hHHHH------------
Confidence 4677777777777777776 788999999999999987766654432110 00 00000
Q ss_pred hhhcccCCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC----CC
Q psy7837 124 NFYGHLVYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY----PD 199 (299)
Q Consensus 124 ~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~----~~ 199 (299)
.....++|+|+++.+...|+-|+-- .+.....+..+|..... ..
T Consensus 252 ---------------------------~~~~~i~G~E~~~~~~~la~mNl~l-----hg~~~~~I~~~dtL~~~~~~~~~ 299 (530)
T 3ufb_A 252 ---------------------------LQESSIFGGEAKSLPYLLVQMNLLL-----HGLEYPRIDPENSLRFPLREMGD 299 (530)
T ss_dssp ---------------------------HHTCCEEEECCSHHHHHHHHHHHHH-----HTCSCCEEECSCTTCSCGGGCCG
T ss_pred ---------------------------HhhhhhhhhhccHHHHHHHHHHHHh-----cCCccccccccccccCchhhhcc
Confidence 0123577777777777777776654 23445567777765322 12
Q ss_pred CCCeeEEEecchhh----------------------hHHHHHHHhcc-------CCcEEEEEecC
Q psy7837 200 AAPYDVIYISQAIR----------------------DIPWHIVDQLK-------LGGRMLFIKGH 235 (299)
Q Consensus 200 ~~~fD~v~~~~~~~----------------------~~~~~~~~~L~-------~gG~lv~~~~~ 235 (299)
..+||+|++|+++. .+...+.+.|| +||++.+..++
T Consensus 300 ~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~ 364 (530)
T 3ufb_A 300 KDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPN 364 (530)
T ss_dssp GGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEH
T ss_pred cccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecc
Confidence 25799999999862 11235566665 79999998764
No 326
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.16 E-value=3.7e-06 Score=69.70 Aligned_cols=46 Identities=22% Similarity=0.303 Sum_probs=40.9
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHHH
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKNI 173 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~~ 173 (299)
...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++
T Consensus 55 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~ 103 (221)
T 3u81_A 55 REYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQML 103 (221)
T ss_dssp HHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHH
T ss_pred HhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHH
Confidence 3456899999999999999999984 679999999999999999873
No 327
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.16 E-value=7.9e-06 Score=72.79 Aligned_cols=64 Identities=27% Similarity=0.249 Sum_probs=54.4
Q ss_pred CCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 49 ESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 49 ~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..+.+.+.++..+. +.++.+|||+|||+|.++..++...++..+++++|+++.+++.+++++..
T Consensus 187 l~~~la~~l~~~~~--~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~ 250 (354)
T 3tma_A 187 LTPVLAQALLRLAD--ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALA 250 (354)
T ss_dssp CCHHHHHHHHHHTT--CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhC--CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHH
Confidence 44555556665554 78999999999999999999999886678899999999999999999876
No 328
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.14 E-value=8.2e-06 Score=65.75 Aligned_cols=61 Identities=16% Similarity=0.107 Sum_probs=48.0
Q ss_pred chHHHHHHHHhcc-CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 52 SDHCLVLELLSGH-LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 52 ~~~~~~~~~l~~~-~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.+...+++.+... ..++.+|||+|||+|.++..+++. ...+++++|+++.+++.+++++..
T Consensus 28 ~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~ 89 (189)
T 3p9n_A 28 RVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEA 89 (189)
T ss_dssp HHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHH
Confidence 3445566666532 168899999999999999977764 235899999999999999999876
No 329
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.14 E-value=4.4e-06 Score=69.70 Aligned_cols=49 Identities=22% Similarity=0.417 Sum_probs=44.2
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+.++.+|||+|||+|.++..+++..+ .++++++|+++.+++.++++...
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~ 120 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAE 120 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTT
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhc
Confidence 57899999999999999999999987 68999999999999998887654
No 330
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.14 E-value=8.5e-06 Score=67.72 Aligned_cols=50 Identities=30% Similarity=0.435 Sum_probs=45.2
Q ss_pred ccCCCCCEEEEEccC-CCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 63 GHLKYGDKVLEIGTG-SGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 63 ~~~~~g~~vldiG~G-~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..++++.+|||+||| +|.++..+++.. ..+++++|+++.+++.+++++..
T Consensus 51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~ 101 (230)
T 3evz_A 51 TFLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIER 101 (230)
T ss_dssp TTCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHH
T ss_pred hhcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHH
Confidence 347899999999999 999999999886 46899999999999999999876
No 331
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.14 E-value=7e-06 Score=70.89 Aligned_cols=50 Identities=26% Similarity=0.460 Sum_probs=42.0
Q ss_pred ccCCCCCEEEEEccCCCHHHHH-HHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 63 GHLKYGDKVLEIGTGSGYLTTL-FGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 63 ~~~~~g~~vldiG~G~G~~~~~-la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..+++|++|||||||+|.++.. +++.. .++|+++|+++.+++.|++++..
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~--ga~V~gIDis~~~l~~Ar~~~~~ 168 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVY--GMRVNVVEIEPDIAELSRKVIEG 168 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTT--CCEEEEEESSHHHHHHHHHHHHH
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHh
Confidence 3589999999999999877654 45433 46999999999999999999876
No 332
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.14 E-value=5e-06 Score=68.38 Aligned_cols=45 Identities=38% Similarity=0.569 Sum_probs=40.4
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcC---CeEEEEeCChHHHHHHHHH
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMG---AKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~---~~v~~~D~~~~~~~~a~~~ 172 (299)
...++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.++++
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~ 121 (215)
T 2yxe_A 74 DLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERT 121 (215)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Confidence 45678999999999999999999875 7899999999999998875
No 333
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.13 E-value=6.5e-06 Score=71.11 Aligned_cols=69 Identities=23% Similarity=0.298 Sum_probs=51.6
Q ss_pred ccccccCCcchHHHHHHHHhccC--CCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 43 GHNAFMESPSDHCLVLELLSGHL--KYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 43 ~~~~~~~~p~~~~~~~~~l~~~~--~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..+..+..|.. ..+++.+...+ .++.+|||+|||+|..+..++.. +..+++++|+++.+++.+++++..
T Consensus 98 ~~~~lipr~~t-e~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~ 168 (284)
T 1nv8_A 98 EEGVFVPRPET-EELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAER 168 (284)
T ss_dssp CTTSCCCCTTH-HHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCceecChhH-HHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHH
Confidence 33444444433 33444433322 37789999999999999999988 567999999999999999999876
No 334
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.13 E-value=2.8e-06 Score=70.96 Aligned_cols=36 Identities=22% Similarity=0.210 Sum_probs=29.4
Q ss_pred cCCCCCEEEEEccCCCHHHHHHHHH--hCC-CceEEEEe
Q psy7837 64 HLKYGDKVLEIGTGSGYLTTLFGAM--VGI-SGKVYTIE 99 (299)
Q Consensus 64 ~~~~g~~vldiG~G~G~~~~~la~~--~~~-~g~v~~~d 99 (299)
.++||++|+|+||++|.|+++.++. ++. .|.++++|
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D 108 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGP 108 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCST
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccc
Confidence 4799999999999999999999997 543 45555555
No 335
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.13 E-value=4.6e-06 Score=71.08 Aligned_cols=58 Identities=16% Similarity=0.381 Sum_probs=47.9
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+++.+. .+.++.+|||+|||+|.++..+++. ..++++++|+++.+++.+++++..
T Consensus 34 ~~~~l~~l~-~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~ 91 (267)
T 3kkz_A 34 TLKALSFID-NLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQ 91 (267)
T ss_dssp HHHHHTTCC-CCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHhcc-cCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHH
Confidence 344444443 4678999999999999999999987 346899999999999999998876
No 336
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.12 E-value=1e-05 Score=70.30 Aligned_cols=46 Identities=26% Similarity=0.285 Sum_probs=44.1
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHh
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRR 175 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~ 175 (299)
.++..|||++||+|.++..+++.|.+++++|+++.+++.++++++.
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999999999999999876
No 337
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.12 E-value=1.1e-05 Score=67.73 Aligned_cols=65 Identities=32% Similarity=0.530 Sum_probs=53.9
Q ss_pred ccccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 45 NAFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 45 ~~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+..|.....+++.+. +.++++|||+|||+|.++..+++. .++++++|+++.+++.+++++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~ 135 (248)
T 2yvl_A 71 KTQIIYPKDSFYIALKLN--LNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKK 135 (248)
T ss_dssp SSCCCCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHH
T ss_pred CCCcccchhHHHHHHhcC--CCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHH
Confidence 334455666666666665 789999999999999999999988 46899999999999999988865
No 338
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.12 E-value=9.7e-06 Score=70.32 Aligned_cols=50 Identities=10% Similarity=0.108 Sum_probs=45.0
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..++.+|||+|||+|.++..+++.+.+..+++++|+++.+++.+++++..
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~ 83 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEG 83 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 35899999999999999999998765668999999999999999998866
No 339
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.12 E-value=1.2e-05 Score=64.29 Aligned_cols=60 Identities=23% Similarity=0.443 Sum_probs=50.1
Q ss_pred CcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 50 SPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 50 ~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+...+++.+. +.++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++++..
T Consensus 18 ~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~ 77 (192)
T 1l3i_A 18 AMEVRCLIMCLAE--PGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQR 77 (192)
T ss_dssp CHHHHHHHHHHHC--CCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHH
Confidence 3444555666664 7899999999999999999998876 5899999999999999988865
No 340
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.12 E-value=5.7e-06 Score=68.80 Aligned_cols=45 Identities=33% Similarity=0.455 Sum_probs=40.5
Q ss_pred cCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHH
Q psy7837 64 HLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKR 111 (299)
Q Consensus 64 ~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~ 111 (299)
.+.++.+|||+|||+|.++..+++. ..+++++|+++.+++.++++
T Consensus 45 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~ 89 (226)
T 3m33_A 45 LLTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN 89 (226)
T ss_dssp HCCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh
Confidence 3678999999999999999999987 35899999999999998877
No 341
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.11 E-value=6.5e-06 Score=69.00 Aligned_cols=60 Identities=20% Similarity=0.333 Sum_probs=50.9
Q ss_pred CcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 50 SPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 50 ~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
++.....+++.+. ++++.+|||+|||+|.++..+++..+ +++++|+++.+++.+++.+..
T Consensus 6 ~~~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~ 65 (239)
T 1xxl_A 6 HHHSLGLMIKTAE--CRAEHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQE 65 (239)
T ss_dssp CHHHHHHHHHHHT--CCTTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHH
T ss_pred cCCCcchHHHHhC--cCCCCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHH
Confidence 3444567777777 89999999999999999999988753 799999999999999988765
No 342
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.11 E-value=1.3e-05 Score=68.93 Aligned_cols=48 Identities=17% Similarity=0.169 Sum_probs=43.2
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+.++.+|||+|||+|.++..+++..+. +++++|+++.+++.+++.+..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvd~s~~~~~~a~~~~~~ 109 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDV--NVVGLTLSKNQANHVQQLVAN 109 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHT
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHh
Confidence 578999999999999999999977653 899999999999999988765
No 343
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.10 E-value=2.5e-05 Score=66.22 Aligned_cols=58 Identities=38% Similarity=0.532 Sum_probs=48.9
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+++.+...++++.+|||+|||+|.++..+++. +. +++++|+++.+++.++++...
T Consensus 107 t~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~-g~--~v~gvDi~~~~v~~a~~n~~~ 164 (254)
T 2nxc_A 107 TRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKL-GG--KALGVDIDPMVLPQAEANAKR 164 (254)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHT-TC--EEEEEESCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHh-CC--eEEEEECCHHHHHHHHHHHHH
Confidence 34556666656789999999999999999998875 33 899999999999999998876
No 344
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.10 E-value=3.9e-06 Score=68.66 Aligned_cols=48 Identities=23% Similarity=0.394 Sum_probs=31.8
Q ss_pred CCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 66 KYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 66 ~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.++.+|||+|||+|.++..+++.. +..+++++|+++.+++.+++++..
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~ 76 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAER 76 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC-------------
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHH
Confidence 788999999999999999999875 456899999999999999988765
No 345
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.09 E-value=5.1e-06 Score=69.50 Aligned_cols=45 Identities=36% Similarity=0.623 Sum_probs=40.7
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcC-CeEEEEeCChHHHHHHHHH
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMG-AKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~-~~v~~~D~~~~~~~~a~~~ 172 (299)
...++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.++++
T Consensus 88 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~ 133 (235)
T 1jg1_A 88 NLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRN 133 (235)
T ss_dssp TCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHH
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHH
Confidence 45678899999999999999999886 8899999999999999875
No 346
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.09 E-value=8.6e-06 Score=67.08 Aligned_cols=58 Identities=19% Similarity=0.217 Sum_probs=47.2
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+++.+. ..++.+|||+|||+|.++..+++..+ ..+++++|+++.+++.+++++..
T Consensus 18 ~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~ 75 (217)
T 3jwh_A 18 MNGVVAALK--QSNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDR 75 (217)
T ss_dssp HHHHHHHHH--HTTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTT
T ss_pred HHHHHHHHH--hcCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHH
Confidence 345555554 46889999999999999999998643 36899999999999999988753
No 347
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.09 E-value=7e-06 Score=70.74 Aligned_cols=63 Identities=17% Similarity=0.255 Sum_probs=51.5
Q ss_pred cchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 51 PSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 51 p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+.....+++.+. .+.++.+|||+|||+|.++..+++..+...+++++|+++.+++.+++.+..
T Consensus 7 ~~~~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~ 69 (284)
T 3gu3_A 7 DDYVSFLVNTVW-KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRL 69 (284)
T ss_dssp HHHHHHHHHTTS-CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHh-ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHh
Confidence 344455555553 367899999999999999999998876557999999999999999988765
No 348
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.09 E-value=1.5e-05 Score=63.69 Aligned_cols=59 Identities=17% Similarity=0.129 Sum_probs=46.9
Q ss_pred hHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 53 DHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 53 ~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+...+++.+. ...++.+|||+|||+|.++..+++. ...+++++|+++.+++.+++++..
T Consensus 31 ~~~~~~~~l~-~~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~ 89 (187)
T 2fhp_A 31 VKESIFNMIG-PYFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAI 89 (187)
T ss_dssp HHHHHHHHHC-SCCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hhcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHH
Confidence 3444555553 2468899999999999999988773 236899999999999999998876
No 349
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.09 E-value=1e-05 Score=68.94 Aligned_cols=55 Identities=20% Similarity=0.242 Sum_probs=48.4
Q ss_pred cchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHH
Q psy7837 51 PSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARK 110 (299)
Q Consensus 51 p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~ 110 (299)
|-+...+++.|. +++|..++|++||.|..|..+++. .|+|+|+|.++.+++.+++
T Consensus 8 pVLl~e~le~L~--~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~ 62 (285)
T 1wg8_A 8 PVLYQEALDLLA--VRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG 62 (285)
T ss_dssp CTTHHHHHHHHT--CCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH
T ss_pred hHHHHHHHHhhC--CCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh
Confidence 445678888887 899999999999999999999987 5789999999999998887
No 350
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.08 E-value=7e-06 Score=68.20 Aligned_cols=43 Identities=9% Similarity=0.091 Sum_probs=38.1
Q ss_pred CCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHHH
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKNI 173 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~~ 173 (299)
++.+|||+|||+|+.+..+++. +.+|+++|+++.+++.+++++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~ 101 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALF 101 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHH
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence 3459999999999999999874 678999999999999999873
No 351
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.08 E-value=9.9e-06 Score=68.66 Aligned_cols=57 Identities=26% Similarity=0.496 Sum_probs=49.1
Q ss_pred hHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 53 DHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 53 ~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
....+++.+. +.++.+|||+|||+|.++..+++..+ +++++|+++.+++.+++.+..
T Consensus 25 ~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~ 81 (260)
T 1vl5_A 25 DLAKLMQIAA--LKGNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEG 81 (260)
T ss_dssp CHHHHHHHHT--CCSCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC--CCCCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHh
Confidence 3467777776 77999999999999999999998753 799999999999999988765
No 352
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.08 E-value=7.7e-06 Score=69.06 Aligned_cols=60 Identities=20% Similarity=0.382 Sum_probs=49.0
Q ss_pred chHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 52 SDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 52 ~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.....+++.+. .+.++.+|||+|||+|.++..+++..+ ++++++|+++.+++.+++++..
T Consensus 32 ~~~~~~l~~l~-~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~ 91 (257)
T 3f4k_A 32 EATRKAVSFIN-ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVK 91 (257)
T ss_dssp HHHHHHHTTSC-CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHH
Confidence 33444444443 367899999999999999999999874 3899999999999999998876
No 353
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.08 E-value=1.5e-05 Score=67.39 Aligned_cols=59 Identities=25% Similarity=0.272 Sum_probs=46.9
Q ss_pred HHHHHHHhccCC----CCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLK----YGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 55 ~~~~~~l~~~~~----~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..+++.+...+. ++.+|||+|||+|.++..+++... ..+++++|+++.+++.+++++..
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~ 111 (254)
T 2h00_A 49 IHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQ 111 (254)
T ss_dssp HHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHH
Confidence 344444444333 578999999999999999888752 36899999999999999998876
No 354
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.08 E-value=1.1e-05 Score=64.76 Aligned_cols=57 Identities=14% Similarity=0.262 Sum_probs=48.6
Q ss_pred hHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 53 DHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 53 ~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
....+++.+. .+++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++++..
T Consensus 40 ~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~ 96 (194)
T 1dus_A 40 GTKILVENVV--VDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKL 96 (194)
T ss_dssp HHHHHHHHCC--CCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcc--cCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHH
Confidence 4456666664 678999999999999999999887 45899999999999999988865
No 355
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.07 E-value=6.2e-06 Score=66.82 Aligned_cols=46 Identities=20% Similarity=0.369 Sum_probs=40.7
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHHH
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKNI 173 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~~ 173 (299)
.+.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.+++++
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 67 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKL 67 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHH
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 4567899999999999999999886 358999999999999998873
No 356
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.07 E-value=1.2e-05 Score=65.70 Aligned_cols=66 Identities=18% Similarity=0.182 Sum_probs=50.6
Q ss_pred ccCCcchHHHHHHHHhc-cCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 47 FMESPSDHCLVLELLSG-HLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 47 ~~~~p~~~~~~~~~l~~-~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
....+.....++..+.. ...++.+|||+|||+|.++..+++. + .++++++|+++.+++.+++++..
T Consensus 28 ~~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~ 94 (207)
T 1wy7_A 28 YRTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLL-G-AKEVICVEVDKEAVDVLIENLGE 94 (207)
T ss_dssp CCCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHTGG
T ss_pred ecCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHH
Confidence 33445555666655432 2457899999999999999999886 2 24799999999999999988765
No 357
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.06 E-value=8.7e-06 Score=73.29 Aligned_cols=52 Identities=23% Similarity=0.166 Sum_probs=44.2
Q ss_pred hhhcccCCCCeEEEEcCCCcHHHHHHHHc-CCe-EEEEeCChHHHHHHHHHHHh
Q psy7837 124 NFYGHLVYGSKVLDIGSGSGYLSALFAYM-GAK-VYAIEHVKNLCKRAMKNIRR 175 (299)
Q Consensus 124 ~~~~~~~~~~~vLDiG~G~G~~~~~la~~-~~~-v~~~D~~~~~~~~a~~~~~~ 175 (299)
.....+.++.+|||||||+|.+++.++.. ++. ++|+|+++.+++.|+++.+.
T Consensus 166 l~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~ 219 (438)
T 3uwp_A 166 IDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDRE 219 (438)
T ss_dssp HHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 33446788999999999999999998864 664 99999999999999988654
No 358
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.06 E-value=6.8e-06 Score=72.08 Aligned_cols=45 Identities=33% Similarity=0.593 Sum_probs=39.8
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCC---eEEEEeCChHHHHHHHHH
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGA---KVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~---~v~~~D~~~~~~~~a~~~ 172 (299)
.+.++.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++
T Consensus 72 ~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~ 119 (317)
T 1dl5_A 72 GLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRN 119 (317)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHH
Confidence 456789999999999999999998754 499999999999998875
No 359
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.05 E-value=1e-05 Score=68.42 Aligned_cols=49 Identities=27% Similarity=0.410 Sum_probs=43.5
Q ss_pred hhhcccCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHH
Q psy7837 124 NFYGHLVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 124 ~~~~~~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~ 172 (299)
.......++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++
T Consensus 86 ~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~ 137 (255)
T 3mb5_A 86 VAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWEN 137 (255)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHH
T ss_pred HHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHH
Confidence 33456678999999999999999999988 67899999999999999887
No 360
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.05 E-value=1.1e-05 Score=67.80 Aligned_cols=55 Identities=16% Similarity=0.187 Sum_probs=46.8
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRV 112 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l 112 (299)
...+..+...+.++.+|||+|||+|.++..+++... +++++|+++.+++.++++.
T Consensus 44 ~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~ 98 (245)
T 3ggd_A 44 VVDLPRFELLFNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKEN 98 (245)
T ss_dssp HHHHHHHTTTSCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHS
T ss_pred HHHHHHHhhccCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhC
Confidence 445555655678999999999999999999998765 6999999999999998865
No 361
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.05 E-value=9.4e-06 Score=68.86 Aligned_cols=45 Identities=13% Similarity=-0.068 Sum_probs=39.2
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRV 112 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l 112 (299)
..++.+|||+|||+|..+.+|++.. ..|+|+|+++.+++.+++..
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~~G---~~V~gvD~S~~~i~~a~~~~ 110 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFADRG---HTVVGVEISEIGIREFFAEQ 110 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHTT---CEEEEECSCHHHHHHHHHHT
T ss_pred CCCCCeEEEeCCCCcHHHHHHHHCC---CeEEEEECCHHHHHHHHHhc
Confidence 4688999999999999999999862 27999999999999987654
No 362
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.05 E-value=1.1e-05 Score=78.38 Aligned_cols=79 Identities=16% Similarity=0.178 Sum_probs=56.6
Q ss_pred cccccccccccccccCCcch---HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHH
Q psy7837 34 TLLDIPHNIGHNAFMESPSD---HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARK 110 (299)
Q Consensus 34 ~y~~~~~~~~~~~~~~~p~~---~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~ 110 (299)
.|.+...+.........|.. ...+++.+. ..++.+|||+|||+|.++..+++..++..+++|+|+++.+++.|++
T Consensus 687 ay~dea~p~me~gtFsPPL~eqRle~LLelL~--~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~ARe 764 (950)
T 3htx_A 687 GVKGPSEERMEAAFFKPPLSKQRVEYALKHIR--ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAK 764 (950)
T ss_dssp EEECSCCCCCCCCCSSSCHHHHHHHHHHHHHH--HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHH
T ss_pred ccccchhhHHhhCcCCchHHHHHHHHHHHHhc--ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHH
Confidence 44444444444443343332 233444444 4589999999999999999999877555789999999999999998
Q ss_pred HHHH
Q psy7837 111 RVKA 114 (299)
Q Consensus 111 ~l~~ 114 (299)
++..
T Consensus 765 RLa~ 768 (950)
T 3htx_A 765 MLHV 768 (950)
T ss_dssp HHHH
T ss_pred Hhhh
Confidence 7764
No 363
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.05 E-value=3.3e-06 Score=73.26 Aligned_cols=57 Identities=23% Similarity=0.358 Sum_probs=45.9
Q ss_pred HHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 57 VLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 57 ~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+++.+...+.++.+|||+|||+|.++..+++.++. .+++++|+++.+++.|++++..
T Consensus 36 ~l~~l~~~~~~~~~VLDiGCG~G~~~~~la~~~~~-~~v~gvDis~~~i~~A~~~~~~ 92 (292)
T 3g07_A 36 RLRVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGP-SRMVGLDIDSRLIHSARQNIRH 92 (292)
T ss_dssp GGGTSCGGGTTTSEEEEESCTTCHHHHHHHHHTCC-SEEEEEESCHHHHHHHHHTC--
T ss_pred HHHhhhhhhcCCCcEEEeCCCCCHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHh
Confidence 33444444567899999999999999999998753 5899999999999999988765
No 364
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.04 E-value=1.1e-05 Score=66.43 Aligned_cols=58 Identities=24% Similarity=0.324 Sum_probs=47.1
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+.+.+. ..++.+|||+|||+|.++..+++..+ ..+++++|+++.+++.+++++..
T Consensus 18 ~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~ 75 (219)
T 3jwg_A 18 LGTVVAVLK--SVNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKI 75 (219)
T ss_dssp HHHHHHHHH--HTTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTG
T ss_pred HHHHHHHHh--hcCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHh
Confidence 344555554 46789999999999999999988653 36899999999999999998754
No 365
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.04 E-value=1.7e-05 Score=65.56 Aligned_cols=58 Identities=22% Similarity=0.249 Sum_probs=48.9
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+.+.+...+.++.+|||+|||+|.++..+++... +++++|+++.+++.++++...
T Consensus 25 ~~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~ 82 (227)
T 1ve3_A 25 IETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKS 82 (227)
T ss_dssp HHHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHh
Confidence 3555666666677899999999999999999988743 899999999999999988765
No 366
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.04 E-value=1.2e-05 Score=65.81 Aligned_cols=54 Identities=33% Similarity=0.481 Sum_probs=45.3
Q ss_pred HHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Q psy7837 56 LVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRV 112 (299)
Q Consensus 56 ~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l 112 (299)
..+..+...+.++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++++
T Consensus 32 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~ 85 (211)
T 3e23_A 32 ATLTKFLGELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL 85 (211)
T ss_dssp HHHHHHHTTSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc
Confidence 344555556788999999999999999999986 347999999999999998875
No 367
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.03 E-value=3.9e-06 Score=70.45 Aligned_cols=48 Identities=19% Similarity=0.215 Sum_probs=41.8
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..+|.+|||||||+|..+..+++..+ ..++++|+++.+++.+++....
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~ 105 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPR 105 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGG
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhh
Confidence 47899999999999999999987543 4799999999999999987765
No 368
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.03 E-value=1.9e-05 Score=67.70 Aligned_cols=69 Identities=14% Similarity=0.351 Sum_probs=52.7
Q ss_pred cccccCCcchHHHHHHHHhccC-CCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 44 HNAFMESPSDHCLVLELLSGHL-KYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 44 ~~~~~~~p~~~~~~~~~l~~~~-~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.+..+..|. ...+++.+.+.+ .++.+|||+|||+|..+..+++.. +..+++++|+++.+++.++++...
T Consensus 86 ~~~~ipr~~-te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~ 155 (276)
T 2b3t_A 86 PATLIPRPD-TECLVEQALARLPEQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQH 155 (276)
T ss_dssp TTSCCCCTT-HHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHH
T ss_pred CCCcccCch-HHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHH
Confidence 334444444 345555554444 678899999999999999999876 357899999999999999998876
No 369
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.03 E-value=9.8e-06 Score=66.18 Aligned_cols=59 Identities=17% Similarity=0.046 Sum_probs=46.2
Q ss_pred hHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 53 DHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 53 ~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+...+++.+.. ..++.+|||+|||+|.++..++... ..+|+++|+++.+++.+++++..
T Consensus 40 ~~~~l~~~l~~-~~~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~ 98 (201)
T 2ift_A 40 VKETLFNWLMP-YIHQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQT 98 (201)
T ss_dssp HHHHHHHHHHH-HHTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hcCCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHH
Confidence 44455555542 2378999999999999999866553 25899999999999999999876
No 370
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.03 E-value=9.8e-06 Score=66.39 Aligned_cols=57 Identities=16% Similarity=0.266 Sum_probs=46.3
Q ss_pred hHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 53 DHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 53 ~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+...+++.+. .+++ +|||+|||+|.++..+++. +..+++++|+++.+++.+++++..
T Consensus 32 ~~~~~~~~~~--~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~ 88 (219)
T 3dlc_A 32 IAENIINRFG--ITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIAD 88 (219)
T ss_dssp HHHHHHHHHC--CCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC--CCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHh
Confidence 3444444443 4556 9999999999999999987 346899999999999999998876
No 371
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.03 E-value=1.4e-05 Score=64.88 Aligned_cols=62 Identities=23% Similarity=0.289 Sum_probs=47.6
Q ss_pred CcchHHHHHHHHhc-cCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH
Q psy7837 50 SPSDHCLVLELLSG-HLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 113 (299)
Q Consensus 50 ~p~~~~~~~~~l~~-~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~ 113 (299)
.+.....++..+.. ...++.+|||+|||+|.++..+++. + ..+++++|+++.+++.+++++.
T Consensus 33 ~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~ 95 (200)
T 1ne2_A 33 DASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLL-G-AESVTAFDIDPDAIETAKRNCG 95 (200)
T ss_dssp CHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHT-T-BSEEEEEESCHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHhcC
Confidence 34444555554432 2457899999999999999999886 2 3579999999999999988753
No 372
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.02 E-value=1.2e-05 Score=70.41 Aligned_cols=48 Identities=19% Similarity=0.142 Sum_probs=43.3
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+.++.+|||+|||+|.++..+++..+ .+++++|+++.+++.+++.+..
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~ 135 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFD--VNVIGLTLSKNQHARCEQVLAS 135 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHh
Confidence 57899999999999999999998874 4899999999999999988765
No 373
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.02 E-value=1.2e-05 Score=66.40 Aligned_cols=48 Identities=21% Similarity=0.228 Sum_probs=42.8
Q ss_pred CCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 66 KYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 66 ~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.++.+|||+|||+|.++..+++.. +...++|+|+++.+++.+++++..
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~ 84 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKD 84 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHH
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHH
Confidence 467899999999999999999875 457899999999999999998876
No 374
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.02 E-value=8.8e-06 Score=67.89 Aligned_cols=43 Identities=26% Similarity=0.379 Sum_probs=39.7
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHH
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~ 172 (299)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~ 97 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKH 97 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHH
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
Confidence 56889999999999999999987 68999999999999999887
No 375
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.02 E-value=8.5e-06 Score=70.14 Aligned_cols=52 Identities=19% Similarity=0.192 Sum_probs=45.2
Q ss_pred HhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 61 LSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 61 l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+...+++|.+|||+|||+|.++..+++.... +|+++|+++.+++.+++++..
T Consensus 119 l~~~~~~~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~ 170 (278)
T 2frn_A 119 MAKVAKPDELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHL 170 (278)
T ss_dssp HHHHCCTTCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHH
T ss_pred HHHhCCCCCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHH
Confidence 3334788999999999999999999987643 899999999999999998875
No 376
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.02 E-value=1.6e-05 Score=67.83 Aligned_cols=48 Identities=25% Similarity=0.355 Sum_probs=43.2
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+.++.+|||+|||+|.++..+++..+ .+++++|+++.+++.+++.+..
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~ 106 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARD--VRVTGISISRPQVNQANARATA 106 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSC--CEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHh
Confidence 57899999999999999999998763 6899999999999999988765
No 377
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.01 E-value=6.8e-06 Score=67.66 Aligned_cols=45 Identities=33% Similarity=0.550 Sum_probs=40.5
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcC---CeEEEEeCChHHHHHHHHH
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMG---AKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~---~~v~~~D~~~~~~~~a~~~ 172 (299)
...++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.++++
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 81 (219)
T 3dh0_A 34 GLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEK 81 (219)
T ss_dssp TCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHH
Confidence 45678899999999999999999875 7899999999999999875
No 378
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.01 E-value=7e-06 Score=69.40 Aligned_cols=45 Identities=22% Similarity=0.307 Sum_probs=40.3
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHHH
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKNI 173 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~~ 173 (299)
..++.+|||+|||+|+.+..+++. +.+|+++|+++.+++.+++++
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~ 124 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVI 124 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHH
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence 356789999999999999999876 689999999999999999873
No 379
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.01 E-value=9.2e-06 Score=68.12 Aligned_cols=44 Identities=23% Similarity=0.342 Sum_probs=39.8
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHH
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~ 172 (299)
..++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~ 104 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKY 104 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHH
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH
Confidence 356889999999999999999987 57899999999999999886
No 380
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.01 E-value=1e-05 Score=64.19 Aligned_cols=50 Identities=20% Similarity=0.199 Sum_probs=40.9
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEA 107 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~ 107 (299)
...+++.+.....++.+|||+|||+|.++..+++.. +++++|+++.+++.
T Consensus 10 ~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~ 59 (170)
T 3q87_B 10 TYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES 59 (170)
T ss_dssp HHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT
T ss_pred HHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc
Confidence 356666665223678899999999999999998765 79999999999987
No 381
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.01 E-value=1.5e-05 Score=66.15 Aligned_cols=45 Identities=40% Similarity=0.600 Sum_probs=40.4
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHcCC-------eEEEEeCChHHHHHHHHH
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYMGA-------KVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~~~-------~v~~~D~~~~~~~~a~~~ 172 (299)
.+.++.+|||+|||+|.++..+++... +|+++|+++.+++.++++
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~ 128 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLEN 128 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHH
Confidence 456789999999999999999998753 899999999999999887
No 382
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.00 E-value=1.8e-05 Score=67.17 Aligned_cols=60 Identities=22% Similarity=0.340 Sum_probs=49.0
Q ss_pred chHHHHHHHHhccCC-CCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 52 SDHCLVLELLSGHLK-YGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 52 ~~~~~~~~~l~~~~~-~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..-..++..+. .++ ++.+|||+|||+|.++..+++... ++++++|+++.+++.+++++..
T Consensus 34 ~~d~~ll~~~~-~~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~ 94 (259)
T 3lpm_A 34 SIDAVLLAKFS-YLPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAY 94 (259)
T ss_dssp CHHHHHHHHHC-CCCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHh-cCCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHH
Confidence 33345555554 367 899999999999999999998743 3899999999999999999876
No 383
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.99 E-value=8.2e-06 Score=67.27 Aligned_cols=54 Identities=24% Similarity=0.259 Sum_probs=44.5
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKR 111 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~ 111 (299)
...++.+. ++++.+|||+|||+|.++..+++.. +..+++++|+++.+++.+.+.
T Consensus 17 ~~~~~~l~--~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~ 70 (218)
T 3mq2_A 17 DAEFEQLR--SQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAK 70 (218)
T ss_dssp HHHHHHHH--TTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHH
T ss_pred HHHHHHhh--ccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHH
Confidence 45666666 7899999999999999999999864 457999999999988864433
No 384
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.99 E-value=1.3e-05 Score=66.50 Aligned_cols=45 Identities=22% Similarity=0.249 Sum_probs=40.3
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHH
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~ 172 (299)
...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++
T Consensus 66 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~ 113 (229)
T 2avd_A 66 RLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPL 113 (229)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHH
T ss_pred HhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH
Confidence 3456889999999999999999986 67899999999999999887
No 385
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.99 E-value=1.5e-05 Score=66.78 Aligned_cols=57 Identities=21% Similarity=0.102 Sum_probs=47.0
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+...+.. ..++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++++..
T Consensus 66 ~~~l~~~~~~-~~~~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~ 122 (241)
T 3gdh_A 66 AEHIAGRVSQ-SFKCDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEV 122 (241)
T ss_dssp HHHHHHHHHH-HSCCSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhh-ccCCCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHH
Confidence 3444444442 4589999999999999999999863 6899999999999999998876
No 386
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.99 E-value=1.8e-05 Score=66.87 Aligned_cols=50 Identities=28% Similarity=0.297 Sum_probs=43.2
Q ss_pred HhhhcccCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHH
Q psy7837 123 INFYGHLVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 123 ~~~~~~~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~ 172 (299)
+.....+.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.++++
T Consensus 88 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~ 140 (258)
T 2pwy_A 88 MVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERN 140 (258)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Confidence 333445678999999999999999999987 67899999999999999875
No 387
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.98 E-value=1.6e-05 Score=67.14 Aligned_cols=60 Identities=23% Similarity=0.243 Sum_probs=47.1
Q ss_pred HHHHHHHhccC--CCCCEEEEEccCCCHHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHL--KYGDKVLEIGTGSGYLTTLFGAMV-GISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 55 ~~~~~~l~~~~--~~g~~vldiG~G~G~~~~~la~~~-~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..+++.+...+ .++.+|||+|||+|.++..+++.+ .+..+++++|+++.+++.+++++..
T Consensus 37 ~~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~ 99 (250)
T 1o9g_A 37 TEIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLAL 99 (250)
T ss_dssp HHHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHH
Confidence 35555554433 367899999999999999999873 2346899999999999999988764
No 388
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.98 E-value=1.4e-05 Score=65.36 Aligned_cols=58 Identities=16% Similarity=0.059 Sum_probs=45.2
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+++.+.. ..++.+|||+|||+|.++..++.... .+|+++|+++.+++.+++++..
T Consensus 42 ~~~l~~~l~~-~~~~~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~ 99 (202)
T 2fpo_A 42 RETLFNWLAP-VIVDAQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLAT 99 (202)
T ss_dssp HHHHHHHHHH-HHTTCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-hcCCCeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHH
Confidence 3444555442 12689999999999999998766532 4899999999999999998876
No 389
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.97 E-value=1.3e-05 Score=67.16 Aligned_cols=45 Identities=27% Similarity=0.353 Sum_probs=40.2
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHHH
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKNI 173 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~~ 173 (299)
..++.+|||+|||+|+.+..+++. +.+++++|+++.+++.+++++
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~ 115 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFI 115 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHH
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence 356789999999999999999876 678999999999999998873
No 390
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.97 E-value=1.2e-05 Score=67.41 Aligned_cols=48 Identities=13% Similarity=0.210 Sum_probs=42.6
Q ss_pred CCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 66 KYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 66 ~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.++.+|||+|||+|..+..++... +.++++++|+++.+++.++++...
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~ 116 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEA 116 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHH
Confidence 578999999999999999999753 457899999999999999998876
No 391
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=97.97 E-value=4.1e-06 Score=71.31 Aligned_cols=53 Identities=15% Similarity=0.186 Sum_probs=42.5
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARK 110 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~ 110 (299)
..+++.|......+.+|||+|||+|.++..|++.. .+|+++|+++.|++.+++
T Consensus 27 ~~l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~ 79 (257)
T 4hg2_A 27 RALFRWLGEVAPARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALR 79 (257)
T ss_dssp HHHHHHHHHHSSCSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCC
T ss_pred HHHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhh
Confidence 34455665555667899999999999999999765 479999999999987654
No 392
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=97.96 E-value=1.2e-05 Score=72.44 Aligned_cols=50 Identities=36% Similarity=0.488 Sum_probs=46.3
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+.++.+|||+|||+|.++..+++..++.++++++|+++.+++.+++++..
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~ 130 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEY 130 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHH
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 56889999999999999999999998888999999999999999988765
No 393
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.96 E-value=1.2e-05 Score=67.11 Aligned_cols=43 Identities=26% Similarity=0.271 Sum_probs=39.1
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHH
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~ 172 (299)
.++.+|||+|||+|+.+..+++. +.+|+++|+++.+++.++++
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~ 116 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKY 116 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHH
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH
Confidence 45789999999999999999986 56899999999999999886
No 394
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.96 E-value=9.7e-06 Score=67.80 Aligned_cols=48 Identities=19% Similarity=0.234 Sum_probs=41.0
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..++.+|||+|||+|.++..+++.. ..+++++|+++.+++.++++...
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~ 105 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPR 105 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGG
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHh
Confidence 5788999999999999999997642 23899999999999999987654
No 395
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.96 E-value=1.5e-05 Score=67.10 Aligned_cols=50 Identities=16% Similarity=0.185 Sum_probs=43.9
Q ss_pred cCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 64 HLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 64 ~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.+.++.+|||+|||+|.++..+++.. +...++++|+++.+++.+++++..
T Consensus 46 ~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~ 95 (246)
T 2vdv_E 46 QMTKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIA 95 (246)
T ss_dssp CBSCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHH
Confidence 35688999999999999999999876 356899999999999999988765
No 396
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.96 E-value=2.9e-05 Score=66.53 Aligned_cols=52 Identities=21% Similarity=0.255 Sum_probs=46.4
Q ss_pred hccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 62 SGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 62 ~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+.++++|||+|||+|.++..+++..+ .++++++|+++.+++.+++++..
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~ 165 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKL 165 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHH
Confidence 34478999999999999999999999865 56899999999999999998876
No 397
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.95 E-value=2e-05 Score=67.57 Aligned_cols=47 Identities=28% Similarity=0.448 Sum_probs=41.6
Q ss_pred hcccCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHH
Q psy7837 126 YGHLVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 126 ~~~~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~ 172 (299)
...+.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.++++
T Consensus 94 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~ 143 (280)
T 1i9g_A 94 EGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRN 143 (280)
T ss_dssp HTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHH
T ss_pred HcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Confidence 345678899999999999999999985 67899999999999999875
No 398
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=97.95 E-value=2.8e-05 Score=67.20 Aligned_cols=59 Identities=17% Similarity=0.184 Sum_probs=48.1
Q ss_pred HHHHHHHHh--ccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLS--GHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~--~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+++.+. ..+.++.+|||+|||+|.++..+++..+ .+++++|+++.+++.+++.+..
T Consensus 67 ~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~ 127 (297)
T 2o57_A 67 DEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQ 127 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHh
Confidence 344555551 1368999999999999999999998874 4899999999999999988765
No 399
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.95 E-value=1.6e-05 Score=67.20 Aligned_cols=48 Identities=13% Similarity=0.221 Sum_probs=43.4
Q ss_pred CCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 66 KYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 66 ~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.++.+|||+|||+|..+..++... +..+|+++|+++.+++.+++++..
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~ 126 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEV 126 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHH
Confidence 578899999999999999999875 457999999999999999999876
No 400
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.95 E-value=2e-05 Score=65.76 Aligned_cols=56 Identities=21% Similarity=0.321 Sum_probs=47.2
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
....+.+...+.++.+|||+|||+|.++..+++. .+++++|+++.+++.+++....
T Consensus 21 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~ 76 (243)
T 3d2l_A 21 PEWVAWVLEQVEPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAME 76 (243)
T ss_dssp HHHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhh
Confidence 4455556556788899999999999999988876 5799999999999999988765
No 401
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.94 E-value=1.9e-05 Score=66.70 Aligned_cols=59 Identities=17% Similarity=0.220 Sum_probs=48.6
Q ss_pred cchHHHHHHHH---hccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Q psy7837 51 PSDHCLVLELL---SGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRV 112 (299)
Q Consensus 51 p~~~~~~~~~l---~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l 112 (299)
+.....+++.+ ...+.++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++.+
T Consensus 20 ~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~ 81 (263)
T 2yqz_A 20 PEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI 81 (263)
T ss_dssp HHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh
Confidence 34456666666 335788999999999999999999876 358999999999999998876
No 402
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.94 E-value=2.1e-05 Score=64.68 Aligned_cols=48 Identities=17% Similarity=0.154 Sum_probs=43.0
Q ss_pred CCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 66 KYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 66 ~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.++.+|||+|||+|.++..+++..+ ..+++++|+++.+++.+++++..
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~ 87 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLE 87 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHH
Confidence 4688999999999999999998863 57899999999999999998865
No 403
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.94 E-value=2.1e-05 Score=65.18 Aligned_cols=48 Identities=19% Similarity=0.090 Sum_probs=42.8
Q ss_pred CCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 66 KYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 66 ~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.++.+|||+|||+|.++..+++.. ++..++|+|+++.+++.+++++..
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~ 80 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHE 80 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHH
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHH
Confidence 467899999999999999999875 457899999999999999988876
No 404
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=97.93 E-value=1.2e-05 Score=68.42 Aligned_cols=57 Identities=21% Similarity=0.257 Sum_probs=45.5
Q ss_pred CcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHH
Q psy7837 50 SPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKR 111 (299)
Q Consensus 50 ~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~ 111 (299)
.+.+...+++.+. ..++.+|||+|||+|.++..+++ +..+++++|+++.+++.+++.
T Consensus 19 ~~~~~~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~ 75 (261)
T 3ege_A 19 DIRIVNAIINLLN--LPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVH 75 (261)
T ss_dssp CHHHHHHHHHHHC--CCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCC
T ss_pred cHHHHHHHHHHhC--CCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhc
Confidence 3455566666665 68899999999999999999997 346899999999988866543
No 405
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=97.93 E-value=3.1e-05 Score=69.52 Aligned_cols=61 Identities=26% Similarity=0.192 Sum_probs=50.3
Q ss_pred CcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 50 SPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 50 ~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.+.+.+.++... +.++.+|||+|||+|.++..++.... .++++|+|+++.+++.+++++..
T Consensus 203 ~~~la~~l~~~~---~~~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~ 263 (373)
T 3tm4_A 203 KASIANAMIELA---ELDGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALA 263 (373)
T ss_dssp CHHHHHHHHHHH---TCCSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhh---cCCCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHH
Confidence 444555555444 78899999999999999999998753 46899999999999999999876
No 406
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=97.93 E-value=1.6e-05 Score=68.26 Aligned_cols=53 Identities=26% Similarity=0.446 Sum_probs=45.0
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRV 112 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l 112 (299)
..+++.+. +.++.+|||+|||+|.++..+++ +..+++++|+++.+++.+++..
T Consensus 47 ~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~ 99 (279)
T 3ccf_A 47 EDLLQLLN--PQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY 99 (279)
T ss_dssp CHHHHHHC--CCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHhC--CCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC
Confidence 45566665 67899999999999999999998 3468999999999999888764
No 407
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.93 E-value=7.9e-07 Score=75.15 Aligned_cols=64 Identities=31% Similarity=0.420 Sum_probs=53.5
Q ss_pred ccc-ccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Q psy7837 44 HNA-FMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRV 112 (299)
Q Consensus 44 ~~~-~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l 112 (299)
.|| +...+.....+++.+. +.++++|||+|||+|.++..+++.. ++++++|+++.+++.+++++
T Consensus 7 ~gq~fl~~~~~~~~i~~~~~--~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~ 71 (245)
T 1yub_A 7 YSQNFLTSEKVLNQIIKQLN--LKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKL 71 (245)
T ss_dssp SCCCBCCCTTTHHHHHHHCC--CCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTT
T ss_pred cCCCCCCCHHHHHHHHHhcC--CCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHh
Confidence 455 4567777888888876 7899999999999999999999874 57999999999988777654
No 408
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.93 E-value=1.1e-05 Score=68.40 Aligned_cols=48 Identities=25% Similarity=0.343 Sum_probs=42.6
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+.++.+|||+|||+|.++..+++.. ..+++++|+++.+++.+++....
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~ 100 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSG 100 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCS
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhc
Confidence 5789999999999999999999987 35899999999999999887644
No 409
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.93 E-value=0.00012 Score=60.25 Aligned_cols=111 Identities=12% Similarity=-0.009 Sum_probs=73.8
Q ss_pred HHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHc-CCe-EEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEc-CCC
Q psy7837 118 TYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYM-GAK-VYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCA-DGR 194 (299)
Q Consensus 118 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~-~~~-v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-d~~ 194 (299)
|+....... .+.++.+|+|+||++|.++..++.. +.. |+++|+-..--+..+ .++. .+...++|..+ |+.
T Consensus 66 KL~ei~ek~-~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~-~~~s-----~gwn~v~fk~gvDv~ 138 (267)
T 3p8z_A 66 KLQWFVERN-MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV-PMST-----YGWNIVKLMSGKDVF 138 (267)
T ss_dssp HHHHHHHTT-SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC-CCCC-----TTTTSEEEECSCCGG
T ss_pred HHHHHHHhc-CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc-hhhh-----cCcCceEEEecccee
Confidence 444433334 6688999999999999999977765 554 999999643110000 0011 34578999999 876
Q ss_pred CCCCCCCCeeEEEecchhh------------hHHHHHHHhccCCcEEEEEecCCCC
Q psy7837 195 RGYPDAAPYDVIYISQAIR------------DIPWHIVDQLKLGGRMLFIKGHEDD 238 (299)
Q Consensus 195 ~~~~~~~~fD~v~~~~~~~------------~~~~~~~~~L~~gG~lv~~~~~~~~ 238 (299)
...+ .++|.|+|+..-. .+.+-+.++|++ |.+++-+..+..
T Consensus 139 ~~~~--~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 139 YLPP--EKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp GCCC--CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred ecCC--ccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 5433 5699999987531 123345678888 888888776654
No 410
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.93 E-value=4.6e-05 Score=68.13 Aligned_cols=106 Identities=14% Similarity=0.066 Sum_probs=68.0
Q ss_pred CCeEEEEcCCCcHHHHHHHH-----------------cCCeEEEEeCChHHHHHHHHHHHhcCCcc-------cCCCCeE
Q psy7837 132 GSKVLDIGSGSGYLSALFAY-----------------MGAKVYAIEHVKNLCKRAMKNIRRGAPAI-------ALAENFE 187 (299)
Q Consensus 132 ~~~vLDiG~G~G~~~~~la~-----------------~~~~v~~~D~~~~~~~~a~~~~~~~~~~~-------~~~~~v~ 187 (299)
..+|+|+|||+|.+++.+.. ...+|+.-|+-.+.-...-+.+......+ ....+.-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 57899999999999987621 13468888987666555544443310000 0000112
Q ss_pred EEE---cCCCCCCCCCCCeeEEEecchhhhHH--------------------------------------------HHHH
Q psy7837 188 FVC---ADGRRGYPDAAPYDVIYISQAIRDIP--------------------------------------------WHIV 220 (299)
Q Consensus 188 ~~~---~d~~~~~~~~~~fD~v~~~~~~~~~~--------------------------------------------~~~~ 220 (299)
|+. +.......+.++||+|+++.+++|+. +...
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333 33333445568999999999988753 2348
Q ss_pred HhccCCcEEEEEecCCC
Q psy7837 221 DQLKLGGRMLFIKGHED 237 (299)
Q Consensus 221 ~~L~~gG~lv~~~~~~~ 237 (299)
+.|+|||++++.+....
T Consensus 213 ~eL~pGG~mvl~~~gr~ 229 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRT 229 (374)
T ss_dssp HHEEEEEEEEEEEEECC
T ss_pred HHhCCCCEEEEEEecCC
Confidence 89999999999987654
No 411
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.93 E-value=1.8e-05 Score=72.21 Aligned_cols=49 Identities=22% Similarity=0.299 Sum_probs=41.8
Q ss_pred hcccCCCCeEEEEcCCCcHHHHHHHHc-C-CeEEEEeCChHHHHHHHHHHH
Q psy7837 126 YGHLVYGSKVLDIGSGSGYLSALFAYM-G-AKVYAIEHVKNLCKRAMKNIR 174 (299)
Q Consensus 126 ~~~~~~~~~vLDiG~G~G~~~~~la~~-~-~~v~~~D~~~~~~~~a~~~~~ 174 (299)
...+.++.+|||+|||+|.++..+++. + .+|+|+|+++.+++.|+..++
T Consensus 237 ~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~ 287 (433)
T 1u2z_A 237 QCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYE 287 (433)
T ss_dssp HTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHH
T ss_pred hcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHH
Confidence 345678899999999999999999986 5 479999999999999966554
No 412
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.92 E-value=2.4e-05 Score=63.73 Aligned_cols=60 Identities=12% Similarity=0.207 Sum_probs=47.7
Q ss_pred HHHHHHHHhcc-CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGH-LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~~~-~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+++.+... ..++.+|||+|||+|..+..++... +..+++++|+++.+++.+++++..
T Consensus 51 ~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~ 111 (207)
T 1jsx_A 51 VRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHE 111 (207)
T ss_dssp HHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHH
Confidence 44555555411 1258899999999999999999876 357899999999999999998876
No 413
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=97.92 E-value=3.3e-05 Score=62.31 Aligned_cols=55 Identities=18% Similarity=0.186 Sum_probs=45.7
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..+++.+. ..++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++++..
T Consensus 22 ~~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~ 76 (199)
T 2xvm_A 22 SEVLEAVK--VVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSI 76 (199)
T ss_dssp HHHHHHTT--TSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHhh--ccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHh
Confidence 34555554 567889999999999999999987 34899999999999999988765
No 414
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.91 E-value=2.6e-05 Score=64.11 Aligned_cols=54 Identities=31% Similarity=0.322 Sum_probs=45.8
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 113 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~ 113 (299)
..+++.+. ..++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++.+.
T Consensus 35 ~~~l~~~~--~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~ 88 (220)
T 3hnr_A 35 EDILEDVV--NKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP 88 (220)
T ss_dssp HHHHHHHH--HTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC
T ss_pred HHHHHHhh--ccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC
Confidence 56666666 568999999999999999999986 3589999999999998887654
No 415
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.91 E-value=0.00014 Score=62.18 Aligned_cols=112 Identities=14% Similarity=0.015 Sum_probs=70.4
Q ss_pred HHHHHHHHhhhcccCCCCeEEEEcCCCcHHHHHHHHc-CC-eEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCC
Q psy7837 116 AETYIKRINFYGHLVYGSKVLDIGSGSGYLSALFAYM-GA-KVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADG 193 (299)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 193 (299)
+.|+.+.... ..+.++.+|||+||++|.++..+++. +. .|.++|+...+...... .+ ....++.....+.
T Consensus 67 a~KL~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~------~~~~~iv~~~~~~ 138 (300)
T 3eld_A 67 AAKIRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQ------TLGWNIVKFKDKS 138 (300)
T ss_dssp HHHHHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CC------BTTGGGEEEECSC
T ss_pred HHHHHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-cc------ccCCceEEeecCc
Confidence 4455555555 55678999999999999999999975 54 48899986432100000 00 0011233333222
Q ss_pred CCCCCCCCCeeEEEecchhh------------hHHHHHHHhccCC-cEEEEEecC
Q psy7837 194 RRGYPDAAPYDVIYISQAIR------------DIPWHIVDQLKLG-GRMLFIKGH 235 (299)
Q Consensus 194 ~~~~~~~~~fD~v~~~~~~~------------~~~~~~~~~L~~g-G~lv~~~~~ 235 (299)
........++|+|+++.... .+.+-+..+|+|| |.+++.+..
T Consensus 139 di~~l~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 139 NVFTMPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CTTTSCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred eeeecCCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 22122346799999987643 1233457899999 999998876
No 416
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.91 E-value=2.7e-05 Score=63.60 Aligned_cols=57 Identities=18% Similarity=0.134 Sum_probs=47.4
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 113 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~ 113 (299)
..+.+.+...+.++.+|||+|||+|.++..+++... .+++++|+++.+++.++++..
T Consensus 30 ~~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~ 86 (215)
T 2pxx_A 30 SSFRALLEPELRPEDRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYA 86 (215)
T ss_dssp HHHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhcc
Confidence 345666666678999999999999999999988632 279999999999999988764
No 417
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.91 E-value=2.4e-05 Score=64.78 Aligned_cols=47 Identities=51% Similarity=0.846 Sum_probs=42.6
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHc-C--CeEEEEeCChHHHHHHHHHHHh
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYM-G--AKVYAIEHVKNLCKRAMKNIRR 175 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~-~--~~v~~~D~~~~~~~~a~~~~~~ 175 (299)
+.++.+|||+|||+|..+..+++. + .+|+++|+++.+++.+++++..
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 124 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRK 124 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 567899999999999999999876 4 6899999999999999999866
No 418
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.91 E-value=1.6e-05 Score=68.14 Aligned_cols=50 Identities=30% Similarity=0.450 Sum_probs=41.8
Q ss_pred HhhhcccCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHH
Q psy7837 123 INFYGHLVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 123 ~~~~~~~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~ 172 (299)
+.....+.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.++++
T Consensus 102 ~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~ 154 (275)
T 1yb2_A 102 IIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDN 154 (275)
T ss_dssp ----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHH
T ss_pred HHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHH
Confidence 334456778899999999999999999887 68999999999999999875
No 419
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.91 E-value=1.7e-05 Score=69.01 Aligned_cols=80 Identities=14% Similarity=0.125 Sum_probs=65.9
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc--CCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCCC---C--CC
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM--GAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRGY---P--DA 200 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~--~~ 200 (299)
...++.+|||+|||+|..+..+++. +.+|+++|.|+.+++.++++++.+ + .+++++++|+.... . ..
T Consensus 23 ~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~-----g-~~v~~v~~d~~~l~~~l~~~g~ 96 (301)
T 1m6y_A 23 KPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF-----S-DRVSLFKVSYREADFLLKTLGI 96 (301)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG-----T-TTEEEEECCGGGHHHHHHHTTC
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc-----C-CcEEEEECCHHHHHHHHHhcCC
Confidence 3467899999999999999999887 578999999999999999998773 3 68999999987531 1 11
Q ss_pred CCeeEEEecchhh
Q psy7837 201 APYDVIYISQAIR 213 (299)
Q Consensus 201 ~~fD~v~~~~~~~ 213 (299)
.+||.|+++.+..
T Consensus 97 ~~~D~Vl~D~gvS 109 (301)
T 1m6y_A 97 EKVDGILMDLGVS 109 (301)
T ss_dssp SCEEEEEEECSCC
T ss_pred CCCCEEEEcCccc
Confidence 4799999987654
No 420
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.91 E-value=2.5e-05 Score=68.94 Aligned_cols=48 Identities=33% Similarity=0.459 Sum_probs=43.9
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc-C--CeEEEEeCChHHHHHHHHHHHh
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM-G--AKVYAIEHVKNLCKRAMKNIRR 175 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~-~--~~v~~~D~~~~~~~~a~~~~~~ 175 (299)
.+.++.+|||+|||+|.++..+++. | .+|+++|+++.+++.++++++.
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~ 152 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKH 152 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Confidence 5678999999999999999999987 5 7899999999999999999876
No 421
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.90 E-value=2.7e-05 Score=64.74 Aligned_cols=49 Identities=18% Similarity=0.370 Sum_probs=43.4
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..++.+|||+|||+|.++..+++.. +..+++++|+++.+++.+++.+..
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~ 90 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRG 90 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCS
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhcc
Confidence 5688999999999999999999886 356899999999999999988754
No 422
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.89 E-value=1.8e-05 Score=66.08 Aligned_cols=54 Identities=19% Similarity=0.334 Sum_probs=45.1
Q ss_pred HHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Q psy7837 56 LVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRV 112 (299)
Q Consensus 56 ~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l 112 (299)
.+++.+...+.++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++..
T Consensus 42 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~ 95 (242)
T 3l8d_A 42 TIIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG 95 (242)
T ss_dssp THHHHHHHHSCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT
T ss_pred HHHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc
Confidence 445556556789999999999999999999987 347999999999999887763
No 423
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.89 E-value=3e-05 Score=66.45 Aligned_cols=49 Identities=31% Similarity=0.467 Sum_probs=42.9
Q ss_pred hhhcccCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHH
Q psy7837 124 NFYGHLVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 124 ~~~~~~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~ 172 (299)
.....+.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.++++
T Consensus 105 ~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~ 156 (277)
T 1o54_A 105 AMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESN 156 (277)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHH
T ss_pred HHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHH
Confidence 33446678999999999999999999887 57899999999999999887
No 424
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.88 E-value=2e-05 Score=66.09 Aligned_cols=49 Identities=16% Similarity=0.226 Sum_probs=41.4
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..++.+|||||||+|.++..+++.. +...++|+|+++.+++.+++++..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~ 92 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRA 92 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHH
Confidence 4567899999999999999999875 356899999999999999887754
No 425
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=97.88 E-value=1.2e-05 Score=69.91 Aligned_cols=56 Identities=20% Similarity=0.129 Sum_probs=47.2
Q ss_pred HHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 59 ELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 59 ~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+.+...++++.+|||+|||+|.++..++....+..+++++|+++.+++.+++++..
T Consensus 110 ~~l~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~ 165 (305)
T 3ocj_A 110 RALQRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAG 165 (305)
T ss_dssp HHHHHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTT
T ss_pred HHHHhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHh
Confidence 33444578999999999999999999875555667999999999999999998865
No 426
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.87 E-value=3.8e-05 Score=64.16 Aligned_cols=43 Identities=23% Similarity=0.410 Sum_probs=37.2
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHH
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAM 170 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~ 170 (299)
.+.++.+|||+|||+|.++..+++. ...|+++|+++.+++.+.
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~ 118 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELL 118 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHH
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHH
Confidence 4678999999999999999999876 458999999999876553
No 427
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=97.87 E-value=5.2e-05 Score=66.14 Aligned_cols=48 Identities=15% Similarity=0.223 Sum_probs=43.6
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+.++.+|||+|||+|.++..+++..+ .+++++|+++.+++.+++++..
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~ 162 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFG--SRVEGVTLSAAQADFGNRRARE 162 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHH
Confidence 57899999999999999999999864 5899999999999999998876
No 428
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.87 E-value=4.5e-06 Score=70.39 Aligned_cols=44 Identities=23% Similarity=0.321 Sum_probs=38.5
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHH
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~ 172 (299)
..++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~ 104 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPY 104 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHH
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH
Confidence 345789999999999999999984 67899999999988888776
No 429
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.87 E-value=4.5e-05 Score=64.15 Aligned_cols=47 Identities=23% Similarity=0.336 Sum_probs=41.4
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..++.+|||+|||+|.++..+++. ..+++++|+++.+++.++++...
T Consensus 39 ~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~ 85 (252)
T 1wzn_A 39 KREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKE 85 (252)
T ss_dssp SSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHh
Confidence 367889999999999999999886 24799999999999999988765
No 430
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=97.85 E-value=2.4e-05 Score=66.37 Aligned_cols=58 Identities=21% Similarity=0.326 Sum_probs=47.2
Q ss_pred hHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH
Q psy7837 53 DHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 113 (299)
Q Consensus 53 ~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~ 113 (299)
....+.+.+...+.++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++...
T Consensus 36 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~ 93 (263)
T 3pfg_A 36 EAADLAALVRRHSPKAASLLDVACGTGMHLRHLADSF---GTVEGLELSADMLAIARRRNP 93 (263)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTS---SEEEEEESCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCC
Confidence 3455666666666778999999999999999998763 379999999999999887653
No 431
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.85 E-value=3.6e-05 Score=63.04 Aligned_cols=53 Identities=25% Similarity=0.406 Sum_probs=44.3
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARK 110 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~ 110 (299)
...+++.+. .+.++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++
T Consensus 34 ~~~~~~~l~-~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~ 86 (218)
T 3ou2_A 34 APAALERLR-AGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR 86 (218)
T ss_dssp HHHHHHHHT-TTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG
T ss_pred HHHHHHHHh-cCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh
Confidence 345555554 3778899999999999999999988 3489999999999998887
No 432
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=97.85 E-value=2e-05 Score=66.49 Aligned_cols=46 Identities=24% Similarity=0.252 Sum_probs=41.1
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKR 111 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~ 111 (299)
+.++.+|||+|||+|.++..+++.. +..+++++|+++.+++.+++.
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~ 76 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADR 76 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh
Confidence 5788999999999999999999886 346899999999999998876
No 433
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=97.85 E-value=4.4e-05 Score=63.49 Aligned_cols=55 Identities=22% Similarity=0.353 Sum_probs=45.6
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRV 112 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l 112 (299)
..+.+.+...+.++.+|||+|||+|.++..+++... +++++|+++.+++.+++.+
T Consensus 28 ~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~ 82 (239)
T 3bxo_A 28 SDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRL 82 (239)
T ss_dssp HHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhC
Confidence 445555555457889999999999999999998864 7999999999999888764
No 434
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=97.85 E-value=2e-05 Score=62.15 Aligned_cols=51 Identities=16% Similarity=0.251 Sum_probs=43.7
Q ss_pred HHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHH
Q psy7837 56 LVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKR 111 (299)
Q Consensus 56 ~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~ 111 (299)
.+++.+. +.++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++.
T Consensus 8 ~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~ 58 (170)
T 3i9f_A 8 EYLPNIF--EGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK 58 (170)
T ss_dssp TTHHHHH--SSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH
T ss_pred HHHHhcC--cCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh
Confidence 3455555 7889999999999999999999876 3899999999999988877
No 435
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.85 E-value=2.7e-05 Score=64.60 Aligned_cols=48 Identities=42% Similarity=0.739 Sum_probs=42.5
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc-C-------CeEEEEeCChHHHHHHHHHHHh
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM-G-------AKVYAIEHVKNLCKRAMKNIRR 175 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~-~-------~~v~~~D~~~~~~~~a~~~~~~ 175 (299)
.+.++.+|||+|||+|.++..+++. + .+|+++|+++.+++.+++++..
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~ 136 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNT 136 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHh
Confidence 3567899999999999999999875 4 4899999999999999998766
No 436
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=97.84 E-value=4.7e-05 Score=66.43 Aligned_cols=60 Identities=17% Similarity=0.083 Sum_probs=46.6
Q ss_pred hHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 53 DHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 53 ~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+...+++.+...+.++.+|||+|||+|.++..+++. ...+++++|+++.+++.+++....
T Consensus 20 l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~ 79 (313)
T 3bgv_A 20 LIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYED 79 (313)
T ss_dssp HHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHH
Confidence 345555666544568899999999999999988873 246899999999999999987754
No 437
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.84 E-value=0.00019 Score=61.12 Aligned_cols=102 Identities=14% Similarity=-0.007 Sum_probs=67.7
Q ss_pred cccCCCCeEEEEcCCCcHHHHHHHHc-CCe-EEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEc-CCCCCCCCCCCe
Q psy7837 127 GHLVYGSKVLDIGSGSGYLSALFAYM-GAK-VYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCA-DGRRGYPDAAPY 203 (299)
Q Consensus 127 ~~~~~~~~vLDiG~G~G~~~~~la~~-~~~-v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~f 203 (299)
..+.++..|||+||++|.++..++.. |.. |+++|+-..--+..+ .+++ .....+.+..+ |+....+ .++
T Consensus 90 ~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~q-----l~w~lV~~~~~~Dv~~l~~--~~~ 161 (321)
T 3lkz_A 90 RFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQS-----YGWNIVTMKSGVDVFYRPS--ECC 161 (321)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCB-----TTGGGEEEECSCCTTSSCC--CCC
T ss_pred cCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhh-----cCCcceEEEeccCHhhCCC--CCC
Confidence 45678889999999999999977665 655 999999643110000 0001 22345778877 7655433 569
Q ss_pred eEEEecchh-------h-----hHHHHHHHhccCC-cEEEEEecCC
Q psy7837 204 DVIYISQAI-------R-----DIPWHIVDQLKLG-GRMLFIKGHE 236 (299)
Q Consensus 204 D~v~~~~~~-------~-----~~~~~~~~~L~~g-G~lv~~~~~~ 236 (299)
|.|+|+..- + .+.+-+..+|+++ |.+++-+..+
T Consensus 162 D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 162 DTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 999998751 0 1233456788888 8999988766
No 438
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.83 E-value=3.4e-05 Score=62.56 Aligned_cols=47 Identities=17% Similarity=0.317 Sum_probs=41.1
Q ss_pred cCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 64 HLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 64 ~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.+.++ +|||+|||+|.++..+++. ..+++++|+++.+++.+++....
T Consensus 27 ~~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~ 73 (202)
T 2kw5_A 27 QIPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQE 73 (202)
T ss_dssp HSCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHH
T ss_pred hCCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHh
Confidence 36677 9999999999999999876 24899999999999999988765
No 439
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.83 E-value=2.8e-05 Score=64.78 Aligned_cols=45 Identities=27% Similarity=0.381 Sum_probs=38.7
Q ss_pred ccCCCCeEEEEcCCCcHHHHHHHHc---CCeEEEEeCChHHHHHHHHH
Q psy7837 128 HLVYGSKVLDIGSGSGYLSALFAYM---GAKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 128 ~~~~~~~vLDiG~G~G~~~~~la~~---~~~v~~~D~~~~~~~~a~~~ 172 (299)
.+.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.+.++
T Consensus 74 ~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~ 121 (233)
T 2ipx_A 74 HIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINL 121 (233)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHH
T ss_pred cCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHH
Confidence 4567899999999999999999887 36899999999988877643
No 440
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=97.83 E-value=3.5e-05 Score=63.41 Aligned_cols=52 Identities=21% Similarity=0.325 Sum_probs=43.4
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKR 111 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~ 111 (299)
..+++.+. ..++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++.
T Consensus 42 ~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~ 93 (227)
T 3e8s_A 42 QAILLAIL--GRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA 93 (227)
T ss_dssp HHHHHHHH--HTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT
T ss_pred HHHHHHhh--cCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh
Confidence 44556655 567799999999999999999887 34799999999999988876
No 441
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.83 E-value=0.00012 Score=65.63 Aligned_cols=100 Identities=14% Similarity=0.053 Sum_probs=66.3
Q ss_pred CCeEEEEcCCCcHHHHHHHHc-------------------CCeEEEEeCC-----------hHHHHHHHHHHHhcCCccc
Q psy7837 132 GSKVLDIGSGSGYLSALFAYM-------------------GAKVYAIEHV-----------KNLCKRAMKNIRRGAPAIA 181 (299)
Q Consensus 132 ~~~vLDiG~G~G~~~~~la~~-------------------~~~v~~~D~~-----------~~~~~~a~~~~~~~~~~~~ 181 (299)
..+|+|+||++|.+++.+... ..+|+..|+- +...+.+++. . +
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~--~-----g 125 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE--N-----G 125 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH--T-----C
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh--c-----c
Confidence 478999999999999876543 1357888875 2222222111 1 1
Q ss_pred CCCCeEEEEcCCCC---CCCCCCCeeEEEecchhhhHHH-----------------------------------------
Q psy7837 182 LAENFEFVCADGRR---GYPDAAPYDVIYISQAIRDIPW----------------------------------------- 217 (299)
Q Consensus 182 ~~~~v~~~~~d~~~---~~~~~~~fD~v~~~~~~~~~~~----------------------------------------- 217 (299)
...+.-|+.+.... .+.+.+++|+|+++.+++|+.+
T Consensus 126 ~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~ 205 (384)
T 2efj_A 126 RKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFT 205 (384)
T ss_dssp CCTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHH
Confidence 11234566665443 3455689999999999887421
Q ss_pred ----HHHHhccCCcEEEEEecCCCC
Q psy7837 218 ----HIVDQLKLGGRMLFIKGHEDD 238 (299)
Q Consensus 218 ----~~~~~L~~gG~lv~~~~~~~~ 238 (299)
.-.+.|+|||++++.+.....
T Consensus 206 ~FL~~Ra~eL~pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 206 TFLRIHSEELISRGRMLLTFICKED 230 (384)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHhccCCeEEEEEecCCC
Confidence 116899999999999877654
No 442
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.83 E-value=4.4e-05 Score=64.72 Aligned_cols=53 Identities=26% Similarity=0.373 Sum_probs=42.8
Q ss_pred HHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Q psy7837 57 VLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRV 112 (299)
Q Consensus 57 ~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l 112 (299)
+.+.+...+.++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++..
T Consensus 44 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~ 96 (260)
T 2avn_A 44 IGSFLEEYLKNPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKG 96 (260)
T ss_dssp HHHHHHHHCCSCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhc
Confidence 34444444458899999999999999999876 247999999999999888764
No 443
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=97.82 E-value=4.3e-05 Score=65.04 Aligned_cols=57 Identities=26% Similarity=0.387 Sum_probs=45.6
Q ss_pred HHHHHHHhccC-CCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHL-KYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRV 112 (299)
Q Consensus 55 ~~~~~~l~~~~-~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l 112 (299)
..+.+.+...+ .++.+|||+|||+|.++..+++.+ +..+++++|+++.+++.+++..
T Consensus 72 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~ 129 (269)
T 1p91_A 72 DAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY 129 (269)
T ss_dssp HHHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC
Confidence 34444544433 688999999999999999999876 2458999999999999888764
No 444
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=97.82 E-value=3.5e-05 Score=64.31 Aligned_cols=56 Identities=20% Similarity=0.302 Sum_probs=45.2
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 113 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~ 113 (299)
...+++.+.. ..++.+|||+|||+|.++..+++... +++++|+++.+++.+++...
T Consensus 30 ~~~~~~~l~~-~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~ 85 (250)
T 2p7i_A 30 HPFMVRAFTP-FFRPGNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLK 85 (250)
T ss_dssp HHHHHHHHGG-GCCSSCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSC
T ss_pred HHHHHHHHHh-hcCCCcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhh
Confidence 3556666653 45788999999999999999987643 69999999999999887653
No 445
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.82 E-value=2.7e-05 Score=63.15 Aligned_cols=38 Identities=21% Similarity=0.213 Sum_probs=34.8
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCC-CceEEEEeCCH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGI-SGKVYTIEHIP 102 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~-~g~v~~~d~~~ 102 (299)
++++.+|||+|||+|.++..+++..++ .++++++|+++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~ 58 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKI 58 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCc
Confidence 688999999999999999999998864 68999999998
No 446
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=97.81 E-value=5.3e-05 Score=65.07 Aligned_cols=55 Identities=18% Similarity=0.225 Sum_probs=46.6
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..+++.+. ..++.+|||+|||+|.++..+++. + .+++++|+++.+++.+++.+..
T Consensus 110 ~~~~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~-g--~~v~~vD~s~~~~~~a~~~~~~ 164 (286)
T 3m70_A 110 GDVVDAAK--IISPCKVLDLGCGQGRNSLYLSLL-G--YDVTSWDHNENSIAFLNETKEK 164 (286)
T ss_dssp HHHHHHHH--HSCSCEEEEESCTTCHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHhh--ccCCCcEEEECCCCCHHHHHHHHC-C--CeEEEEECCHHHHHHHHHHHHH
Confidence 45556665 448899999999999999999987 2 3799999999999999998876
No 447
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=97.80 E-value=6.6e-05 Score=64.45 Aligned_cols=46 Identities=17% Similarity=0.277 Sum_probs=40.7
Q ss_pred CCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 66 KYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 66 ~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++.+..
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~ 112 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEA 112 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHh
Confidence 44789999999999999999987 34799999999999999988765
No 448
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.80 E-value=4.7e-05 Score=68.32 Aligned_cols=57 Identities=16% Similarity=0.294 Sum_probs=47.6
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+.+++.+. ..++.+|||+|||+|.++..+++.. +..+++++|+++.+++.+++++..
T Consensus 212 ~~ll~~l~--~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ 268 (375)
T 4dcm_A 212 RFFMQHLP--ENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVET 268 (375)
T ss_dssp HHHHHTCC--CSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHhCc--ccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHH
Confidence 34555554 4567899999999999999999875 346899999999999999999876
No 449
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.80 E-value=5e-05 Score=65.42 Aligned_cols=56 Identities=20% Similarity=0.208 Sum_probs=45.0
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+.+.+. ..++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++...
T Consensus 46 ~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~ 101 (293)
T 3thr_A 46 KAWLLGLLR--QHGCHRVLDVACGTGVDSIMLVEEG---FSVTSVDASDKMLKYALKERWN 101 (293)
T ss_dssp HHHHHHHHH--HTTCCEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHhc--ccCCCEEEEecCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHhhhh
Confidence 344444444 4688999999999999999998873 3899999999999999887643
No 450
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.79 E-value=3.3e-05 Score=62.30 Aligned_cols=40 Identities=23% Similarity=0.303 Sum_probs=35.7
Q ss_pred cCCCCCEEEEEccCCCHHHHHHHHHhCCC--------ceEEEEeCCHH
Q psy7837 64 HLKYGDKVLEIGTGSGYLTTLFGAMVGIS--------GKVYTIEHIPE 103 (299)
Q Consensus 64 ~~~~g~~vldiG~G~G~~~~~la~~~~~~--------g~v~~~d~~~~ 103 (299)
.++++.+|||+|||+|.++..+++..+.. ++++++|+++.
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~ 66 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI 66 (196)
T ss_dssp CCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc
Confidence 36889999999999999999999998754 79999999983
No 451
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=97.79 E-value=3.6e-05 Score=66.65 Aligned_cols=56 Identities=27% Similarity=0.240 Sum_probs=44.5
Q ss_pred hHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 53 DHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 53 ~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
....+++.+. . ++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++++..
T Consensus 71 ~~~~~~~~~~--~-~~~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~ 126 (299)
T 3g2m_A 71 EAREFATRTG--P-VSGPVLELAAGMGRLTFPFLDLG---WEVTALELSTSVLAAFRKRLAE 126 (299)
T ss_dssp HHHHHHHHHC--C-CCSCEEEETCTTTTTHHHHHTTT---CCEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHHHhhC--C-CCCcEEEEeccCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHhh
Confidence 3445555543 2 34499999999999999999872 4799999999999999998875
No 452
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.79 E-value=2.1e-05 Score=65.51 Aligned_cols=43 Identities=14% Similarity=0.206 Sum_probs=36.7
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCC-HHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHI-PELLEAA 108 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~-~~~~~~a 108 (299)
.+++++|||+|||+|.++..+++.. +..+++|+|++ +.|++.|
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A 65 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDIS 65 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHH
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHH
Confidence 5789999999999999999998653 45789999999 7777766
No 453
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.79 E-value=2.6e-05 Score=63.23 Aligned_cols=36 Identities=28% Similarity=0.520 Sum_probs=32.7
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPE 103 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~ 103 (299)
+++|.+|||+|||+|.++..+++. .++|+++|+++.
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~ 58 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEM 58 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEecccc
Confidence 689999999999999999999987 578999999864
No 454
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=97.79 E-value=4.5e-05 Score=65.10 Aligned_cols=49 Identities=33% Similarity=0.432 Sum_probs=44.1
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+.++.+|||+|||+|.++..+++.. +..+++++|+++.+++.+++++..
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~ 83 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEK 83 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHH
Confidence 5789999999999999999999884 457999999999999999998865
No 455
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.78 E-value=1.3e-05 Score=68.21 Aligned_cols=49 Identities=18% Similarity=0.158 Sum_probs=39.3
Q ss_pred cCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 64 HLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 64 ~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+|.+|||+|||+|.++..++.... .+|+++|+++.+++.+++.+..
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~--~~v~g~D~s~~~l~~a~~~~~~ 100 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSF--QDITLSDFTDRNREELEKWLKK 100 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhh--cceeeccccHHHHHHHHHHHhc
Confidence 356889999999999988776554321 3799999999999999987654
No 456
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.78 E-value=8e-05 Score=60.58 Aligned_cols=58 Identities=19% Similarity=0.119 Sum_probs=44.0
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+++.+. ...++.+|||+|||+|..+..+.... ..+++++|+++.+++.+++.+..
T Consensus 11 ~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~ 68 (209)
T 2p8j_A 11 LYRFLKYCN-ESNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRE 68 (209)
T ss_dssp HHHHHHHHH-HSSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-ccCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHh
Confidence 345555554 36788999999999999855443333 34899999999999999988765
No 457
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=97.78 E-value=3.5e-05 Score=64.41 Aligned_cols=46 Identities=17% Similarity=0.216 Sum_probs=39.7
Q ss_pred ccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHH
Q psy7837 63 GHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKR 111 (299)
Q Consensus 63 ~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~ 111 (299)
..++++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++.
T Consensus 37 ~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~ 82 (240)
T 3dli_A 37 PYFKGCRRVLDIGCGRGEFLELCKEEG---IESIGVDINEDMIKFCEGK 82 (240)
T ss_dssp GGTTTCSCEEEETCTTTHHHHHHHHHT---CCEEEECSCHHHHHHHHTT
T ss_pred hhhcCCCeEEEEeCCCCHHHHHHHhCC---CcEEEEECCHHHHHHHHhh
Confidence 346789999999999999999998872 3699999999999988765
No 458
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.77 E-value=3.3e-05 Score=66.58 Aligned_cols=57 Identities=9% Similarity=0.109 Sum_probs=41.3
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 113 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~ 113 (299)
..+.+.+.....++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++.+.
T Consensus 59 ~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~--~~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 59 RCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSH--FEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp HHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGG--CSEEEEECSCHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccC--CCeEEEeCCCHHHHHHHHHHHh
Confidence 34445554333478999999999999554444432 2489999999999999988654
No 459
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=97.77 E-value=6e-05 Score=68.98 Aligned_cols=58 Identities=19% Similarity=0.310 Sum_probs=46.9
Q ss_pred HHHHHHHHhcc--CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGH--LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~~~--~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+++.+.+. +.++++|||+|||+|.++..+++. ..+++++|+++.+++.|++++..
T Consensus 271 ~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~ 330 (433)
T 1uwv_A 271 NQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARL 330 (433)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHH
Confidence 34444444322 567899999999999999999987 35899999999999999998865
No 460
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=97.77 E-value=3.9e-05 Score=63.50 Aligned_cols=47 Identities=26% Similarity=0.384 Sum_probs=42.0
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
++++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++.+..
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~ 74 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARS 74 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHh
Confidence 678999999999999999999987 34899999999999999987754
No 461
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.76 E-value=4.4e-05 Score=64.18 Aligned_cols=48 Identities=19% Similarity=0.287 Sum_probs=41.8
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..++.+|||+|||+|.++..+++.. ..+++++|+++.+++.+++.+..
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~ 138 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAG 138 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTT
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhcc
Confidence 4578999999999999999998876 35799999999999999887654
No 462
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=97.76 E-value=4e-05 Score=65.75 Aligned_cols=66 Identities=20% Similarity=0.161 Sum_probs=51.0
Q ss_pred cccCCcchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 46 AFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 46 ~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..+-+|.....- .++...+++|++|||+|||+|.++..++.... .+|+++|+++..++.+++++..
T Consensus 105 k~~f~~~~~~er-~ri~~~~~~g~~VlD~~aG~G~~~i~~a~~g~--~~V~avD~np~a~~~~~~N~~~ 170 (278)
T 3k6r_A 105 KIMFSPANVKER-VRMAKVAKPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHL 170 (278)
T ss_dssp TSCCCGGGHHHH-HHHHHHCCTTCEEEETTCTTTTTTHHHHHHTC--CEEEEECCCHHHHHHHHHHHHH
T ss_pred ceEEcCCcHHHH-HHHHHhcCCCCEEEEecCcCcHHHHHHHHhcC--CeEEEEECCHHHHHHHHHHHHH
Confidence 344455543222 33444588999999999999999999987642 4899999999999999999876
No 463
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.76 E-value=1.9e-05 Score=66.03 Aligned_cols=54 Identities=20% Similarity=0.217 Sum_probs=41.8
Q ss_pred HHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHH
Q psy7837 55 CLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKR 111 (299)
Q Consensus 55 ~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~ 111 (299)
..+++.+.. -.+|.+|||+|||+|.++..+++. + ..+|+++|+++.+++.++++
T Consensus 26 ~~~L~~~~~-~~~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvDis~~ml~~a~~~ 79 (232)
T 3opn_A 26 EKALKEFHL-EINGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALDVGTNQLAWKIRS 79 (232)
T ss_dssp HHHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSCCCCCHHHHT
T ss_pred HHHHHHcCC-CCCCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEcCCHHHHHHHHHh
Confidence 455555541 235779999999999999999887 3 24899999999999887664
No 464
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=97.75 E-value=7.8e-05 Score=62.12 Aligned_cols=58 Identities=17% Similarity=0.283 Sum_probs=46.5
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+.+.+.....++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++.+..
T Consensus 24 ~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~s~~~~~~a~~~~~~ 81 (246)
T 1y8c_A 24 SDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKF---KNTWAVDLSQEMLSEAENKFRS 81 (246)
T ss_dssp HHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGS---SEEEEECSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCC---CcEEEEECCHHHHHHHHHHHhh
Confidence 344555555333478999999999999999998862 4799999999999999988765
No 465
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.75 E-value=4.6e-05 Score=64.80 Aligned_cols=49 Identities=20% Similarity=0.281 Sum_probs=43.6
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+.++.+|||+|||+|.++..+++... ..+++++|+++.+++.+++++..
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~ 82 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLEL 82 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTS
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHh
Confidence 67889999999999999999998863 46899999999999999988754
No 466
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=97.74 E-value=7e-05 Score=65.19 Aligned_cols=46 Identities=15% Similarity=0.086 Sum_probs=36.9
Q ss_pred CCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 67 YGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 67 ~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
++.+|||+|||+|..+..++..- ..+|+|+|+++.+++.|++....
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~~~ 93 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERYNK 93 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHHHh
Confidence 58899999999997665444322 35799999999999999987754
No 467
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=97.73 E-value=6.1e-05 Score=67.73 Aligned_cols=57 Identities=32% Similarity=0.419 Sum_probs=47.4
Q ss_pred HHHHHHHhccC----CCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHL----KYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 55 ~~~~~~l~~~~----~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+.+++.+...+ .++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++++..
T Consensus 217 ~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~ 277 (381)
T 3dmg_A 217 LLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEA 277 (381)
T ss_dssp HHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHH
Confidence 45556664433 47899999999999999999987 24899999999999999999876
No 468
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.73 E-value=7.4e-05 Score=64.27 Aligned_cols=57 Identities=23% Similarity=0.384 Sum_probs=45.2
Q ss_pred HHHHHHHhcc--CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeC-CHHHHHHHHHHHH
Q psy7837 55 CLVLELLSGH--LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEH-IPELLEAARKRVK 113 (299)
Q Consensus 55 ~~~~~~l~~~--~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~-~~~~~~~a~~~l~ 113 (299)
..+.+.+... ..++.+|||+|||+|.++..+++. + .++|+++|+ ++.+++.++++..
T Consensus 65 ~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n~~ 124 (281)
T 3bzb_A 65 RALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILNSLESNIR 124 (281)
T ss_dssp HHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHHH
Confidence 3444555433 368899999999999999988875 2 358999999 8999999999883
No 469
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.73 E-value=5e-05 Score=72.02 Aligned_cols=88 Identities=14% Similarity=0.134 Sum_probs=60.0
Q ss_pred HHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCeEEE
Q psy7837 58 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFYGHLVYGSKVLD 137 (299)
Q Consensus 58 ~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~vLD 137 (299)
...+...+..+-+|||||||.|.++..+++.. ..|+|+|.++.+++.|+....+. +..-++
T Consensus 57 ~~~~~~~~~~~~~vLDvGCG~G~~~~~la~~g---a~V~giD~~~~~i~~a~~~a~~~----------------~~~~~~ 117 (569)
T 4azs_A 57 YDNLSRALGRPLNVLDLGCAQGFFSLSLASKG---ATIVGIDFQQENINVCRALAEEN----------------PDFAAE 117 (569)
T ss_dssp HHHHHHHHTSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTS----------------TTSEEE
T ss_pred HHHHHhhcCCCCeEEEECCCCcHHHHHHHhCC---CEEEEECCCHHHHHHHHHHHHhc----------------CCCceE
Confidence 34444445677899999999999999999864 36999999999999999877652 323356
Q ss_pred EcCCCcHHHHHHHHcC-Ce-EEEEeCChH
Q psy7837 138 IGSGSGYLSALFAYMG-AK-VYAIEHVKN 164 (299)
Q Consensus 138 iG~G~G~~~~~la~~~-~~-v~~~D~~~~ 164 (299)
.=|++-.-.......+ .+ |++.+.-+.
T Consensus 118 ~~~~~~~~~~~~~~~~~fD~v~~~e~~eh 146 (569)
T 4azs_A 118 FRVGRIEEVIAALEEGEFDLAIGLSVFHH 146 (569)
T ss_dssp EEECCHHHHHHHCCTTSCSEEEEESCHHH
T ss_pred EEECCHHHHhhhccCCCccEEEECcchhc
Confidence 6666543222211112 33 778877544
No 470
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.72 E-value=3.2e-05 Score=63.45 Aligned_cols=47 Identities=23% Similarity=0.304 Sum_probs=41.3
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++.+..
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~ 95 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKR 95 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTT
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhccc
Confidence 5678899999999999999998874 4799999999999999987754
No 471
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.72 E-value=2e-05 Score=66.04 Aligned_cols=35 Identities=17% Similarity=0.213 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCCcHHHHHHHHc------CCeEEEEeCChHH
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYM------GAKVYAIEHVKNL 165 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~------~~~v~~~D~~~~~ 165 (299)
++.+|||||||+|..+..+++. +.+|+++|+++.+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~ 121 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSR 121 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTT
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHH
Confidence 4689999999999999999886 6889999999865
No 472
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.72 E-value=4e-05 Score=64.11 Aligned_cols=58 Identities=16% Similarity=0.111 Sum_probs=45.0
Q ss_pred HHHHHHHhccC---CCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 55 CLVLELLSGHL---KYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 55 ~~~~~~l~~~~---~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..+++.+...+ .++.+|||+|||+|.++..+++.. ..+++++|+++.+++.+++++..
T Consensus 64 ~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~ 124 (241)
T 2ex4_A 64 RKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGE 124 (241)
T ss_dssp HHHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGG
T ss_pred HHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhh
Confidence 34444444332 368999999999999999988765 35899999999999999988765
No 473
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.71 E-value=6e-05 Score=62.75 Aligned_cols=46 Identities=15% Similarity=0.069 Sum_probs=39.0
Q ss_pred CCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 66 KYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 66 ~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++.+..
T Consensus 65 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~ 110 (235)
T 3lcc_A 65 LPLGRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGS 110 (235)
T ss_dssp SCCEEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTT
T ss_pred CCCCCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhc
Confidence 34459999999999999988763 45799999999999999988754
No 474
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.71 E-value=1.9e-05 Score=67.34 Aligned_cols=97 Identities=14% Similarity=0.037 Sum_probs=74.5
Q ss_pred CCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCCCCC----CCCCCCeeEE
Q psy7837 131 YGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADGRRG----YPDAAPYDVI 206 (299)
Q Consensus 131 ~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~----~~~~~~fD~v 206 (299)
.+..+||+.+|||.+++.+.+.+.+++.+|.++..++..++|++. ..+++++..|+... .++..+||+|
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~-------~~~~~V~~~D~~~~L~~l~~~~~~fdLV 163 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHF-------NKKVYVNHTDGVSKLNALLPPPEKRGLI 163 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCT-------TSCEEEECSCHHHHHHHHCSCTTSCEEE
T ss_pred cCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCc-------CCcEEEEeCcHHHHHHHhcCCCCCccEE
Confidence 466799999999999999999888899999999999999998754 36799999997631 2333569999
Q ss_pred Eecchhhh--HHH----HHHH--hccCCcEEEEEec
Q psy7837 207 YISQAIRD--IPW----HIVD--QLKLGGRMLFIKG 234 (299)
Q Consensus 207 ~~~~~~~~--~~~----~~~~--~L~~gG~lv~~~~ 234 (299)
+++++... ..+ .+.+ .+.++|++++=.+
T Consensus 164 fiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYP 199 (283)
T 2oo3_A 164 FIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYP 199 (283)
T ss_dssp EECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred EECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEe
Confidence 99999862 222 2322 4567888887443
No 475
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.70 E-value=6.4e-05 Score=60.97 Aligned_cols=42 Identities=24% Similarity=0.424 Sum_probs=37.5
Q ss_pred CCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Q psy7837 68 GDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRV 112 (299)
Q Consensus 68 g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l 112 (299)
+.+|||+|||+|.++..+++.. .+++++|+++.+++.++++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~ 83 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG---HQIEGLEPATRLVELARQTH 83 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT---CCEEEECCCHHHHHHHHHHC
T ss_pred CCeEEEecCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhC
Confidence 8899999999999999999872 37999999999999888763
No 476
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.69 E-value=6.7e-05 Score=63.13 Aligned_cols=46 Identities=22% Similarity=0.321 Sum_probs=40.0
Q ss_pred CCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH
Q psy7837 66 KYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 113 (299)
Q Consensus 66 ~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~ 113 (299)
.++.+|||+|||+|.++..+++... .+++++|+++.+++.+++...
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~ 88 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTT 88 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhc
Confidence 4789999999999999999988743 289999999999999887653
No 477
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.69 E-value=8.5e-05 Score=59.43 Aligned_cols=46 Identities=22% Similarity=0.366 Sum_probs=40.6
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 113 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~ 113 (299)
+.++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++++.
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~ 89 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDFP 89 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCT
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhCC
Confidence 678999999999999999999987 3489999999999999887653
No 478
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.69 E-value=8.1e-05 Score=65.88 Aligned_cols=47 Identities=23% Similarity=0.410 Sum_probs=40.7
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+.++.+|||+|||+|.++..+++. + ..+++++|+++ +++.+++++..
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s~-~~~~a~~~~~~ 108 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQSE-ILYQAMDIIRL 108 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESST-HHHHHHHHHHH
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChHH-HHHHHHHHHHH
Confidence 678999999999999999999986 3 35899999997 88988887765
No 479
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=97.68 E-value=9.7e-05 Score=67.39 Aligned_cols=59 Identities=20% Similarity=0.230 Sum_probs=49.3
Q ss_pred chHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 52 SDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 52 ~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.....+.+.+.. +.++.+|||+|||+|.++..+++.. .+|+++|+++.+++.+++++..
T Consensus 276 ~~~e~l~~~~~~-~~~~~~VLDlgcG~G~~sl~la~~~---~~V~gvD~s~~ai~~A~~n~~~ 334 (425)
T 2jjq_A 276 YQAVNLVRKVSE-LVEGEKILDMYSGVGTFGIYLAKRG---FNVKGFDSNEFAIEMARRNVEI 334 (425)
T ss_dssp HHHHHHHHHHHH-HCCSSEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhc-cCCCCEEEEeeccchHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHH
Confidence 344566666655 7889999999999999999999863 4799999999999999998865
No 480
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.68 E-value=6.3e-05 Score=66.75 Aligned_cols=102 Identities=13% Similarity=0.093 Sum_probs=71.4
Q ss_pred CCeEEEEcCCCcHHHHHHHHc------------C------CeEEEEeCChHHHHHHHHHHHhcCCcccCCCCeEEEEcCC
Q psy7837 132 GSKVLDIGSGSGYLSALFAYM------------G------AKVYAIEHVKNLCKRAMKNIRRGAPAIALAENFEFVCADG 193 (299)
Q Consensus 132 ~~~vLDiG~G~G~~~~~la~~------------~------~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 193 (299)
.-+|+|+||++|.+++.+... + .+|+..|+-.+....+.+.+... ....+.-|+.+..
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~----~~~~~~~f~~gvp 127 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIE----NDVDGVCFINGVP 127 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTS----CSCTTCEEEEEEE
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchh----cccCCCEEEEecc
Confidence 468999999999988765332 2 45999999888887777765431 0001334555443
Q ss_pred C---CCCCCCCCeeEEEecchhhhHH---------------------------------------HHHHHhccCCcEEEE
Q psy7837 194 R---RGYPDAAPYDVIYISQAIRDIP---------------------------------------WHIVDQLKLGGRMLF 231 (299)
Q Consensus 194 ~---~~~~~~~~fD~v~~~~~~~~~~---------------------------------------~~~~~~L~~gG~lv~ 231 (299)
. ..+.+.+++|+|+++.+++|+. +.-.+.|+|||++++
T Consensus 128 gSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl 207 (359)
T 1m6e_X 128 GSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVL 207 (359)
T ss_dssp SCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEE
T ss_pred hhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 3 3455668999999999988743 223889999999999
Q ss_pred EecCCC
Q psy7837 232 IKGHED 237 (299)
Q Consensus 232 ~~~~~~ 237 (299)
......
T Consensus 208 ~~~gr~ 213 (359)
T 1m6e_X 208 TILGRR 213 (359)
T ss_dssp EEEECS
T ss_pred EEecCC
Confidence 987554
No 481
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.67 E-value=3.2e-05 Score=66.71 Aligned_cols=42 Identities=17% Similarity=0.113 Sum_probs=35.8
Q ss_pred CCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Q psy7837 66 KYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAAR 109 (299)
Q Consensus 66 ~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~ 109 (299)
.+|.+|||+|||+|.+|..+++.. .++|+++|+++.|++.+.
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~g--a~~V~aVDvs~~mL~~a~ 125 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNG--AKLVYAVDVGTNQLVWKL 125 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT--CSEEEEECSSSSCSCHHH
T ss_pred ccccEEEecCCCccHHHHHHHhCC--CCEEEEEECCHHHHHHHH
Confidence 367899999999999999988862 358999999999988754
No 482
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.67 E-value=0.00016 Score=65.31 Aligned_cols=51 Identities=14% Similarity=0.169 Sum_probs=43.5
Q ss_pred HhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 61 LSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 61 l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+...+++|.+|||+|||+|.++..++.. +. .|+++|+++.+++.+++++..
T Consensus 208 l~~~~~~g~~VLDlg~GtG~~sl~~a~~-ga--~V~avDis~~al~~a~~n~~~ 258 (393)
T 4dmg_A 208 FEAMVRPGERVLDVYSYVGGFALRAARK-GA--YALAVDKDLEALGVLDQAALR 258 (393)
T ss_dssp HHTTCCTTCEEEEESCTTTHHHHHHHHT-TC--EEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCeEEEcccchhHHHHHHHHc-CC--eEEEEECCHHHHHHHHHHHHH
Confidence 3334567999999999999999999986 32 399999999999999999876
No 483
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.65 E-value=6.2e-05 Score=67.37 Aligned_cols=47 Identities=28% Similarity=0.504 Sum_probs=38.9
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..+|..|||||||+|.++.++++... .+|+++|.++ +++.|++.+..
T Consensus 81 ~~~~k~VLDvG~GtGiLs~~Aa~aGA--~~V~ave~s~-~~~~a~~~~~~ 127 (376)
T 4hc4_A 81 ALRGKTVLDVGAGTGILSIFCAQAGA--RRVYAVEASA-IWQQAREVVRF 127 (376)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTTC--SEEEEEECST-THHHHHHHHHH
T ss_pred hcCCCEEEEeCCCccHHHHHHHHhCC--CEEEEEeChH-HHHHHHHHHHH
Confidence 45799999999999999988887543 4899999996 77888887765
No 484
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.64 E-value=0.00016 Score=61.94 Aligned_cols=66 Identities=20% Similarity=0.283 Sum_probs=47.3
Q ss_pred cccCCcchHHHHHHHHhccCCCCCEEEEEccCCCH----HHHHHHHHhCC---CceEEEEeCCHHHHHHHHHHH
Q psy7837 46 AFMESPSDHCLVLELLSGHLKYGDKVLEIGTGSGY----LTTLFGAMVGI---SGKVYTIEHIPELLEAARKRV 112 (299)
Q Consensus 46 ~~~~~p~~~~~~~~~l~~~~~~g~~vldiG~G~G~----~~~~la~~~~~---~g~v~~~d~~~~~~~~a~~~l 112 (299)
.+...|.....+-+.+... .++.+|||+|||+|. ++..+++..+. ..+++|+|+++.+++.|++..
T Consensus 85 ~FfRd~~~f~~l~~~llp~-~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 85 AFFREAHHFPILAEHARRR-HGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGI 157 (274)
T ss_dssp CTTTTTTHHHHHHHHHHHS-CSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTE
T ss_pred cccCChHHHHHHHHHccCC-CCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcC
Confidence 3445555555555444432 345799999999998 56667776653 248999999999999999875
No 485
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.64 E-value=0.00017 Score=60.10 Aligned_cols=45 Identities=16% Similarity=0.089 Sum_probs=40.4
Q ss_pred CCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 66 KYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 66 ~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
.+..+|||+|||.|-++..+. +..+++++|+++.+++.+++++..
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~ 148 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFARE 148 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHH
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHh
Confidence 678899999999999988776 567999999999999999999766
No 486
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=97.63 E-value=0.00012 Score=61.03 Aligned_cols=47 Identities=17% Similarity=0.234 Sum_probs=40.2
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 113 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~ 113 (299)
..++.+|||+|||+|.++..+++.. ..+++++|+++.+++.+++...
T Consensus 41 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~ 87 (243)
T 3bkw_A 41 EVGGLRIVDLGCGFGWFCRWAHEHG--ASYVLGLDLSEKMLARARAAGP 87 (243)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHTSC
T ss_pred ccCCCEEEEEcCcCCHHHHHHHHCC--CCeEEEEcCCHHHHHHHHHhcc
Confidence 5688999999999999999998862 2389999999999999887653
No 487
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.63 E-value=0.00012 Score=65.01 Aligned_cols=47 Identities=28% Similarity=0.359 Sum_probs=39.6
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..++.+|||+|||+|.++..+++.. ..+|+++|+++ +++.+++.+..
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g--~~~V~~vD~s~-~~~~a~~~~~~ 94 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKS 94 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-HHHHHHHHHHH
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCC--CCEEEEECCHH-HHHHHHHHHHH
Confidence 5789999999999999999998852 35899999996 77888877654
No 488
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.63 E-value=9.2e-05 Score=63.43 Aligned_cols=44 Identities=20% Similarity=0.188 Sum_probs=39.1
Q ss_pred cCCCCeEEEEcCCCcHHHHHHHHc--C-CeEEEEeCChHHHHHHHHH
Q psy7837 129 LVYGSKVLDIGSGSGYLSALFAYM--G-AKVYAIEHVKNLCKRAMKN 172 (299)
Q Consensus 129 ~~~~~~vLDiG~G~G~~~~~la~~--~-~~v~~~D~~~~~~~~a~~~ 172 (299)
..++.+|||+|||+|..+..++.. + .+|+++|+++.+++.++++
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~ 127 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSN 127 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHH
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHH
Confidence 467899999999999999999874 4 7899999999999988875
No 489
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.62 E-value=0.00017 Score=62.01 Aligned_cols=48 Identities=27% Similarity=0.395 Sum_probs=42.1
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+.++.+|||+|||+|.++..+++.. .++++++|+++.+++.+++.+..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~ 109 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAG--IGEYYGVDIAEVSINDARVRARN 109 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHT--CSEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHh
Confidence 6889999999999999999888752 35899999999999999988764
No 490
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.57 E-value=0.00012 Score=57.41 Aligned_cols=41 Identities=20% Similarity=0.400 Sum_probs=36.8
Q ss_pred cCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHH
Q psy7837 64 HLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELL 105 (299)
Q Consensus 64 ~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~ 105 (299)
.++++.+|||+|||+|.++..+++.+++..+++++|+++ +.
T Consensus 19 ~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~ 59 (180)
T 1ej0_A 19 LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MD 59 (180)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CC
T ss_pred CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cc
Confidence 367899999999999999999999987778999999998 64
No 491
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.57 E-value=0.00013 Score=64.20 Aligned_cols=47 Identities=26% Similarity=0.437 Sum_probs=40.1
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+.++.+|||+|||+|.++..+++. + ..+++++|++ .+++.+++.+..
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~~vD~s-~~~~~a~~~~~~ 82 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH-G-AKHVIGVDMS-SIIEMAKELVEL 82 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-C-CSEEEEEESS-THHHHHHHHHHH
T ss_pred hcCCCEEEEecCccHHHHHHHHHC-C-CCEEEEEChH-HHHHHHHHHHHH
Confidence 568899999999999999999886 2 3589999999 588888888765
No 492
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.56 E-value=0.00012 Score=63.93 Aligned_cols=57 Identities=16% Similarity=0.200 Sum_probs=51.3
Q ss_pred cchHHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Q psy7837 51 PSDHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAAR 109 (299)
Q Consensus 51 p~~~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~ 109 (299)
|-+...+++.|. ++||+.++|.+||.|..|..+++.++++|+|+++|.++..++.++
T Consensus 43 pVLl~Evl~~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 43 TVLLDEAVNGLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp CTTTHHHHHHTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred cccHHHHHHhhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 445577788886 899999999999999999999999999999999999999999884
No 493
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.56 E-value=0.00023 Score=62.69 Aligned_cols=47 Identities=17% Similarity=0.109 Sum_probs=41.5
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..++.+|||+|||+|.++..++.. +. +|+++|+++.+++.+++++..
T Consensus 151 ~~~~~~VLDlgcGtG~~sl~la~~-ga--~V~~VD~s~~al~~a~~n~~~ 197 (332)
T 2igt_A 151 ADRPLKVLNLFGYTGVASLVAAAA-GA--EVTHVDASKKAIGWAKENQVL 197 (332)
T ss_dssp SSSCCEEEEETCTTCHHHHHHHHT-TC--EEEEECSCHHHHHHHHHHHHH
T ss_pred cCCCCcEEEcccccCHHHHHHHHc-CC--EEEEEECCHHHHHHHHHHHHH
Confidence 357889999999999999999985 22 899999999999999999875
No 494
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.56 E-value=9.4e-05 Score=63.85 Aligned_cols=49 Identities=22% Similarity=0.203 Sum_probs=37.7
Q ss_pred CCCCEEEEEccCCCHHHHHHHHHhC---CCceE--EEEeCCHHHHHHHHHHHHH
Q psy7837 66 KYGDKVLEIGTGSGYLTTLFGAMVG---ISGKV--YTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 66 ~~g~~vldiG~G~G~~~~~la~~~~---~~g~v--~~~d~~~~~~~~a~~~l~~ 114 (299)
.++.+|||||||+|.++..+...+. +...+ +++|.++.|++.+++.+..
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~ 104 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAK 104 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHh
Confidence 5678999999999988765443321 34444 9999999999999988764
No 495
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=97.56 E-value=0.00019 Score=58.53 Aligned_cols=49 Identities=29% Similarity=0.497 Sum_probs=39.0
Q ss_pred HHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Q psy7837 59 ELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRV 112 (299)
Q Consensus 59 ~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l 112 (299)
+.+...+.++.+|||+|||+|.++..+ + ..+++++|+++.+++.+++..
T Consensus 28 ~~l~~~~~~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s~~~~~~a~~~~ 76 (211)
T 2gs9_A 28 RALKGLLPPGESLLEVGAGTGYWLRRL----P-YPQKVGVEPSEAMLAVGRRRA 76 (211)
T ss_dssp HHHHTTCCCCSEEEEETCTTCHHHHHC----C-CSEEEEECCCHHHHHHHHHHC
T ss_pred HHHHHhcCCCCeEEEECCCCCHhHHhC----C-CCeEEEEeCCHHHHHHHHHhC
Confidence 334444458899999999999998877 1 127999999999999888765
No 496
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.55 E-value=7.6e-05 Score=66.11 Aligned_cols=58 Identities=26% Similarity=0.341 Sum_probs=47.7
Q ss_pred HHHHHHHHhccCCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 54 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 54 ~~~~~~~l~~~~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
...+++.+. ..++.+|||+|||+|.++..+++.. +..+++++|+++.+++.+++++..
T Consensus 185 ~~~ll~~l~--~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~ 242 (343)
T 2pjd_A 185 SQLLLSTLT--PHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAA 242 (343)
T ss_dssp HHHHHHHSC--TTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHH
T ss_pred HHHHHHhcC--cCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHH
Confidence 455555553 3467899999999999999998874 446899999999999999998876
No 497
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.54 E-value=0.00024 Score=60.38 Aligned_cols=46 Identities=17% Similarity=0.126 Sum_probs=43.8
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHcCCeEEEEeCChHHHHHHHHHHHh
Q psy7837 130 VYGSKVLDIGSGSGYLSALFAYMGAKVYAIEHVKNLCKRAMKNIRR 175 (299)
Q Consensus 130 ~~~~~vLDiG~G~G~~~~~la~~~~~v~~~D~~~~~~~~a~~~~~~ 175 (299)
.++..|||..||+|..+.++.++|.+++++|+++..++.++++++.
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh
Confidence 6789999999999999999999999999999999999999999876
No 498
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.54 E-value=9.7e-05 Score=62.76 Aligned_cols=47 Identities=15% Similarity=0.115 Sum_probs=39.1
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCH-------HHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIP-------ELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~-------~~~~~a~~~l~~ 114 (299)
..++.+|||+|||+|..+..+++.. ++|+++|+++ .+++.++++...
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~g---~~V~~vD~s~~~~~ll~~~l~~a~~n~~~ 134 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASLG---LTVTAFEQHPAVACLLSDGIRRALLNPET 134 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHTT---CCEEEEECCHHHHHHHHHHHHHHHHSHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHhC---CEEEEEECChhhhHHHHHHHHHHHhHHHh
Confidence 5678999999999999999999863 5799999999 777777665543
No 499
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.54 E-value=0.00013 Score=64.76 Aligned_cols=47 Identities=34% Similarity=0.367 Sum_probs=41.0
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
+.++.+|||+|||+|.++..+++. ...+++++|+++ +++.+++++..
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s~-~l~~a~~~~~~ 110 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECSS-ISDYAVKIVKA 110 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHH
T ss_pred cCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcHH-HHHHHHHHHHH
Confidence 568899999999999999999987 245899999995 99999888765
No 500
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=97.53 E-value=7e-05 Score=63.29 Aligned_cols=48 Identities=17% Similarity=0.171 Sum_probs=40.6
Q ss_pred CCCCCEEEEEccCCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Q psy7837 65 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 114 (299)
Q Consensus 65 ~~~g~~vldiG~G~G~~~~~la~~~~~~g~v~~~d~~~~~~~~a~~~l~~ 114 (299)
..++.+|||+|||+|.++..++.... .+++++|+++.+++.+++.+..
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~ 101 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKK 101 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTT
T ss_pred ccCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhc
Confidence 46788999999999999988876532 4799999999999999887754
Done!