RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy784
(128 letters)
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 108 bits (271), Expect = 7e-32
Identities = 38/122 (31%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTE 62
+K++++G GVGK+ + +F + F + TI ++ + +E+DG++ L+I DTAG E
Sbjct: 7 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 66
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLEE 122
+F + Y + G +LVY IT + +F+++ + I + DV +++GNKCD+ +
Sbjct: 67 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNI-EEHASADVEKMILGNKCDVND 125
Query: 123 ER 124
+R
Sbjct: 126 KR 127
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 106 bits (266), Expect = 3e-31
Identities = 78/119 (65%), Positives = 100/119 (84%)
Query: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 60
M EYK+VV+G+GGVGKSALT+Q +Q FV++YDPTIEDSYRKQV +DG+ C+L+ILDTAG
Sbjct: 1 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG 60
Query: 61 TEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCD 119
E+++AMRD YM+ G+GF+ V++I +F D+ REQI RVKD+DDVPMVLVGNKCD
Sbjct: 61 QEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCD 119
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 106 bits (266), Expect = 4e-31
Identities = 86/120 (71%), Positives = 102/120 (85%)
Query: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 60
MREYK+VVLGSGGVGKSALTVQFV G F+EKYDPTIED YRK++EVD +LEILDTAG
Sbjct: 1 MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAG 60
Query: 61 TEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDL 120
TEQF +MRDLY+KNGQGFILVYS+ Q +F D+ +R+QI+RVK + VP++LVGNK DL
Sbjct: 61 TEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDL 120
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 105 bits (263), Expect = 2e-30
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTE 62
+K++++G+ GVGKS L ++F + Y TI ++ K VE+DG+ L+I DTAG E
Sbjct: 7 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 66
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKC 118
+F + Y + G I+VY +T Q +FN + ++I R T V +LVGNKC
Sbjct: 67 RFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDR-YATSTVLKLLVGNKC 121
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 103 bits (256), Expect = 1e-29
Identities = 113/119 (94%), Positives = 116/119 (97%)
Query: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 60
MREYK+VVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVD QQCMLEILDTAG
Sbjct: 1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAG 60
Query: 61 TEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCD 119
TEQFTAMRDLYMKNGQGF LVYSITAQSTFNDL DLREQILRVKDT+DVPM+LVGNKCD
Sbjct: 61 TEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCD 119
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 101 bits (251), Expect = 9e-29
Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTE 62
+KIV++G+ GVGK+ L +F QG+F TI D K VE++G++ L+I DTAG E
Sbjct: 6 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 65
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDL 120
+F ++ Y ++ IL Y IT + +F L + +I + + V VLVGNK DL
Sbjct: 66 RFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYAS-NKVITVLVGNKIDL 122
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 100 bits (248), Expect = 4e-28
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 60
M+ K VV+G G VGK+ L + + F +Y PT+ D+Y V + G+ L + DTAG
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
Query: 61 TEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDL 120
E + +R L F++ +S+ + S+F ++ + + P +LVG + DL
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQIDL 119
Query: 121 EEERVV 126
++
Sbjct: 120 RDDPST 125
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 99.1 bits (246), Expect = 4e-28
Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTE 62
KI+++G GVGKS L V+FV+ F + TI ++ K V+++G++ L+I DTAG E
Sbjct: 3 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQE 62
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDL 120
+F + Y + G ILVY IT + TF ++ + + D+ ++LVGNK D+
Sbjct: 63 RFRTITTAYYRGAMGIILVYDITDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSDM 119
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 98.1 bits (243), Expect = 1e-27
Identities = 65/120 (54%), Positives = 93/120 (77%)
Query: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 60
+ +K++++GSGGVGKSALT+QF+ FVE Y+PT DSYRK+V +DG++ ++ILDTAG
Sbjct: 2 LALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAG 61
Query: 61 TEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDL 120
E + A+RD Y ++G+GF+ V+SIT +F +D REQILRVK+ ++VP +LVGNK DL
Sbjct: 62 QEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDL 121
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 97.3 bits (241), Expect = 3e-27
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDGQQCMLEILDTAGTE 62
+K+V++G GVGKS L +F + F + TI + + ++VDG+ +I DTAG E
Sbjct: 5 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLEE 122
++ + Y + G +LVY I T+ ++ +++ D ++ ++LVGNK DL
Sbjct: 65 RYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD-SNIVIMLVGNKSDLRH 123
Query: 123 ER 124
R
Sbjct: 124 LR 125
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 94.7 bits (234), Expect = 4e-26
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGT 61
+ K VV+G G VGK+ L + + F +Y PT+ D+Y V VDG+ L + DTAG
Sbjct: 4 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQ 63
Query: 62 EQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLE 121
E + +R L ++ +S+ + ++F ++ +R + P++LVG K DL
Sbjct: 64 EDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVR-HHCPNTPIILVGTKLDLR 122
Query: 122 EERVVS 127
+++
Sbjct: 123 DDKDTI 128
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 94.0 bits (232), Expect = 4e-26
Identities = 70/126 (55%), Positives = 92/126 (73%)
Query: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 60
+ YK+VV+G GGVGKSALT+QF Q IFV YDPTIEDSY K E+D Q +L++LDTAG
Sbjct: 2 LPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAG 61
Query: 61 TEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDL 120
E+F+AMR+ YM+ G GF++VYS+T +++F + + ILRVKD + PM+LV NK DL
Sbjct: 62 QEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDL 121
Query: 121 EEERVV 126
R V
Sbjct: 122 MHLRKV 127
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 93.2 bits (230), Expect = 9e-26
Identities = 75/126 (59%), Positives = 93/126 (73%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGT 61
+K+VV+G GGVGKSALT+QF+Q FV YDPTIEDSY K VDG L+ILDTAG
Sbjct: 5 ETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQ 64
Query: 62 EQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLE 121
E+F AMR+ YM+ G GF+LV++I + +FN++ L QILRVKD DD P+VLVGNK DLE
Sbjct: 65 EEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLE 124
Query: 122 EERVVS 127
+R V
Sbjct: 125 SQRQVP 130
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 91.4 bits (226), Expect = 6e-25
Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEVDGQQCMLEILDTA 59
+ KI+++G GVGKS+L ++F F + TI D K + VDG + L I DTA
Sbjct: 5 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTA 64
Query: 60 GTEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCD 119
G E+F + Y + QG ILVY +T + TF L + ++ +D+ +LVGNK D
Sbjct: 65 GQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID 124
Query: 120 LEEERV 125
E V
Sbjct: 125 KENREV 130
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 90.7 bits (224), Expect = 7e-25
Identities = 44/119 (36%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDGQQCMLEILDTAGTE 62
+K +++G GVGKS L QF + F+ TI + + +EV GQ+ L+I DTAG E
Sbjct: 5 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 64
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLE 121
+F A+ Y + G ++VY IT +ST+N LS + + + ++L+GNK DLE
Sbjct: 65 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNT-VIILIGNKADLE 122
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 90.8 bits (224), Expect = 7e-25
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTE 62
+K+V LG VGK++L +F+ F Y TI D K + ++ + L++ DTAG E
Sbjct: 1 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQE 60
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLEE 122
+F ++ Y+++ ++VY IT ++F + + + + DV ++LVGNK DL +
Sbjct: 61 RFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERG-SDVIIMLVGNKTDLAD 119
Query: 123 ERV 125
+R
Sbjct: 120 KRQ 122
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 89.9 bits (222), Expect = 2e-24
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQV-EVDGQQCMLEILDTAGTE 62
+K +++G GVGKS L +QF F +D TI + ++ +DG+Q L+I DTAG E
Sbjct: 4 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQE 63
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLEE 122
F ++ Y + G +LVY IT + TFN L+ E R + ++ ++L+GNK DLE
Sbjct: 64 SFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDA-RQHSSSNMVIMLIGNKSDLES 122
Query: 123 ER 124
R
Sbjct: 123 RR 124
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 89.2 bits (220), Expect = 5e-24
Identities = 34/132 (25%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEV-----------DGQQCM 52
K++ LG GVGK+ ++ F K+ T+ +R++ V +
Sbjct: 6 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 65
Query: 53 LEILDTAGTEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMV 112
L++ DTAG E+F ++ + ++ GF+L++ +T+Q +F ++ + Q+ ++ +V
Sbjct: 66 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 125
Query: 113 LVGNKCDLEEER 124
L+GNK DL ++R
Sbjct: 126 LIGNKADLPDQR 137
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 88.6 bits (218), Expect = 6e-24
Identities = 71/125 (56%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
Query: 1 MRE-YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTA 59
M+E Y++VV+G GGVGKSALT+QF+Q FV YDPTIEDSY KQ +D + L+ILDTA
Sbjct: 2 MQEKYRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTA 61
Query: 60 GTEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCD 119
G E+F AMR+ YM+ G+GF+LV+S+T + +F ++ + QILRVKD D+ PM+L+GNK D
Sbjct: 62 GQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKAD 121
Query: 120 LEEER 124
L+ +R
Sbjct: 122 LDHQR 126
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 88.1 bits (217), Expect = 1e-23
Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRK-QVEVDGQQCMLEILDTAGTE 62
+K +V+G+ G GKS L QF++ F + + TI + + V G+ L+I DTAG E
Sbjct: 6 FKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQE 65
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLEE 122
+F ++ Y + G +LVY IT++ T+N L++ + ++ ++L GNK DL+
Sbjct: 66 RFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLAS-QNIVIILCGNKKDLDA 124
Query: 123 ER 124
+R
Sbjct: 125 DR 126
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 87.6 bits (216), Expect = 1e-23
Identities = 38/119 (31%), Positives = 69/119 (57%), Gaps = 2/119 (1%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTE 62
+KI+++G+ VGK++ ++ F + T+ ++ K + + ++ L+I DTAG E
Sbjct: 6 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQE 65
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLE 121
++ + Y + GFIL+Y IT + +FN + D QI + D+ ++LVGNKCD+E
Sbjct: 66 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI-KTYSWDNAQVLLVGNKCDME 123
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 87.2 bits (215), Expect = 2e-23
Identities = 40/126 (31%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEK-YDPTIEDSYRKQ-VEVDGQQCMLEILDTAGT 61
+K++++G GVGK+ L V+F G F+ + T+ +R + ++VDG + L++ DTAG
Sbjct: 7 FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 66
Query: 62 EQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLE 121
E+F ++ Y ++ +L+Y +T +++F+++ +I DV ++L+GNK D
Sbjct: 67 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQ-HDVALMLLGNKVDSA 125
Query: 122 EERVVS 127
ERVV
Sbjct: 126 HERVVK 131
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 85.1 bits (209), Expect = 1e-22
Identities = 44/125 (35%), Positives = 74/125 (59%), Gaps = 2/125 (1%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRK-QVEVDGQQCMLEILDTAG 60
R +KI+V+G VGK+ LT +F G F ++ + TI +R+ V++DG++ +++ DTAG
Sbjct: 1 RIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAG 60
Query: 61 TEQF-TAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCD 119
E+F +M Y +N + VY +T ++F+ L E+ + +D+P +LVGNKCD
Sbjct: 61 QERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCD 120
Query: 120 LEEER 124
L
Sbjct: 121 LRSAI 125
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 83.9 bits (206), Expect = 6e-22
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQ 63
K VV+G G VGK+ L + + F E+Y PT+ D Y V V G+Q +L + DTAG E
Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69
Query: 64 FTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLEEE 123
+ +R L F++ +S+ ++F ++ + L+ + +VP +L+G + DL ++
Sbjct: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGTQIDLRDD 128
Query: 124 RV 125
Sbjct: 129 PK 130
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 82.7 bits (203), Expect = 1e-21
Identities = 39/123 (31%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVE-VDGQQCMLEILDTAGTE 62
+K+++LG GGVGKS+L ++V F + TI + + VDG ++I DTAG E
Sbjct: 7 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 66
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILR---VKDTDDVPMVLVGNKCD 119
+F ++R + + +L +S+ +F +LS+ +++ + VK+ + P V++GNK D
Sbjct: 67 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKID 126
Query: 120 LEE 122
+ E
Sbjct: 127 ISE 129
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 82.0 bits (201), Expect = 2e-21
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQ 63
K+V++G G GK+ L + + F E Y PT+ ++Y +EVDG+Q L + DTAG E
Sbjct: 3 KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLED 62
Query: 64 FTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLEEE 123
+ +R L + ++ +SI + + ++ + ++ +VP++LVGNK DL +
Sbjct: 63 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 121
Query: 124 RVV 126
Sbjct: 122 EHT 124
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 80.1 bits (196), Expect = 1e-20
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTA 59
+RE K+ +LG GVGKS++ +FV+ F +PTI K V+ + I DTA
Sbjct: 2 LRELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 61
Query: 60 GTEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCD 119
G E+F A+ +Y + I+VY IT + TF+ L + ++ R + + + GNKCD
Sbjct: 62 GLERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVREL-RQHGPPSIVVAIAGNKCD 120
Query: 120 L 120
L
Sbjct: 121 L 121
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 80.0 bits (196), Expect = 1e-20
Identities = 57/120 (47%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Query: 3 EYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTE 62
+Y++ V G+GGVGKS+L ++FV+G F E Y PT+ED+YR+ + D C L+I DT G+
Sbjct: 2 DYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSH 61
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVK-DTDDVPMVLVGNKCDLE 121
QF AM+ L + G FILVYSIT++ + +L + EQI +K D + +P++LVGNKCD
Sbjct: 62 QFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDES 121
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 79.3 bits (194), Expect = 3e-20
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 64
KIVV+G GK+AL F + F E Y PT+ ++Y E+D Q+ L + DT+G+ +
Sbjct: 4 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 63
Query: 65 TAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLEEER 124
+R L + ++ + I+ T + + + + + M+LVG K DL +
Sbjct: 64 DNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGE-IQEFCPNTKMLLVGCKSDLRTDV 122
Query: 125 VV 126
Sbjct: 123 ST 124
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 78.5 bits (192), Expect = 4e-20
Identities = 41/128 (32%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
Query: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEVDGQQCMLEILDTA 59
+ ++K+V+LG VGKS+L ++FV+G F E + TI + V +D EI DTA
Sbjct: 4 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 63
Query: 60 GTEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCD 119
G E++ ++ +Y + Q I+VY IT + +F + +++ + + + ++ + L GNK D
Sbjct: 64 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKEL-QRQASPNIVIALSGNKAD 122
Query: 120 LEEERVVS 127
L +R V
Sbjct: 123 LANKRAVD 130
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 78.4 bits (192), Expect = 5e-20
Identities = 39/119 (32%), Positives = 72/119 (60%), Gaps = 2/119 (1%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDP-TIEDSYRKQVEVDGQQCMLEILDTAGTE 62
+K+V+LG G VGK++L +++ + F +K+ K++ + G++ L I DTAG E
Sbjct: 4 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQE 63
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLE 121
+F A+ +Y ++ G ILVY IT + +F + + +++ R +++ + +VGNK DLE
Sbjct: 64 RFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKEL-RKMLGNEICLCIVGNKIDLE 121
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 76.3 bits (186), Expect = 3e-19
Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVE--VDGQQCMLEILDTAGT 61
K+++LG GVGK++L ++V + ++Y TI + + + +++ DTAG
Sbjct: 3 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQ 62
Query: 62 EQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILR---VKDTDDVPMVLVGNKC 118
E+F ++ + + +LVY +T S+F ++ R++ L V + P V++GNK
Sbjct: 63 ERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKI 122
Query: 119 DLEEER 124
D EE +
Sbjct: 123 DAEESK 128
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 74.3 bits (181), Expect = 2e-18
Identities = 49/125 (39%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
Query: 3 EYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTE 62
E K+ + G GVGKSAL V+F+ F+ +YDPT+E +YR Q +D + +EI +
Sbjct: 2 EVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEI-LDTAGQ 60
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLEE 122
+ T R+ +M+ G+GF+LVY IT + +F ++ L+ + +K +V ++LVGNK DL+
Sbjct: 61 EDTIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDH 120
Query: 123 ERVVS 127
R VS
Sbjct: 121 SRQVS 125
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 72.0 bits (175), Expect = 2e-17
Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIED-SYRKQVEVDGQQCMLEILDTAGTE 62
K+++LG GVGK++L Q+V F +Y TI K+V VD + ++I DTAG E
Sbjct: 3 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 62
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVK---DTDDVPMVLVGNKCD 119
+F ++ + + +LV+ +TA +TF L R++ L D ++ P V++GNK D
Sbjct: 63 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 122
Query: 120 L 120
L
Sbjct: 123 L 123
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 70.4 bits (171), Expect = 7e-17
Identities = 24/125 (19%), Positives = 47/125 (37%), Gaps = 4/125 (3%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGT 61
+E +I++LG GK+ + + G V TI V + + D G
Sbjct: 11 KEMRILMLGLDAAGKTTILYKLKLGQSVT----TIPTVGFNVETVTYKNVKFNVWDVGGQ 66
Query: 62 EQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLE 121
++ + Y QG I V + ++ +I+ ++ D +++ NK DL
Sbjct: 67 DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLP 126
Query: 122 EERVV 126
+
Sbjct: 127 DAMKP 131
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 70.1 bits (170), Expect = 7e-17
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDG-QQCMLEILDTAGTEQ 63
K+V+LG VGKS++ ++FV F E +PTI ++ Q EI DTAG E+
Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64
Query: 64 FTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCD 119
F ++ +Y +N Q ++VY +T +F +++ + + D+ + LVGNK D
Sbjct: 65 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKEL-HEQASKDIIIALVGNKID 119
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 69.8 bits (169), Expect = 9e-17
Identities = 49/119 (41%), Positives = 81/119 (68%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGT 61
+ KI +LG VGKS+LT+QFV+G FV+ YDPTIE+++ K + V+GQ+ L+++DTAG
Sbjct: 3 KSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQ 62
Query: 62 EQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDL 120
++++ Y + G+ILVYS+T+ +F + + ++L + +P++LVGNK DL
Sbjct: 63 DEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDL 121
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 67.0 bits (162), Expect = 1e-15
Identities = 35/123 (28%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRK-QVEVDGQQCMLEILDTAGTE 62
+K+V++G GG GK+ + + G F +KY T+ + + DTAG E
Sbjct: 4 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 63
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLEE 122
+F +RD Y Q I+++ +T++ T+ ++ + ++RV +++P+VL GNK D+++
Sbjct: 64 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRV--CENIPIVLCGNKVDIKD 121
Query: 123 ERV 125
+V
Sbjct: 122 RKV 124
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 66.1 bits (160), Expect = 4e-15
Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 16/136 (11%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGT 61
R KI++LG+G GKS Q + DPT + + + + +++D G
Sbjct: 1 RLVKILLLGAGESGKSTFLKQMR---IIHGQDPTKGI---HEYDFEIKNVPFKMVDVGGQ 54
Query: 62 EQFTAMRDLYMKNGQGFILVYSITAQSTFNDLS----------DLREQILRVKDTDDVPM 111
+ + + S + ++ E I+ + +V +
Sbjct: 55 RSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSI 114
Query: 112 VLVGNKCDLEEERVVS 127
+L NK DL EE+V
Sbjct: 115 ILFLNKTDLLEEKVQV 130
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 64.3 bits (155), Expect = 1e-14
Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTEQ 63
K+VV+G+G VGKS++ ++ +GIF + Y TI D +Q++V+ + L + DTAG E+
Sbjct: 4 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 63
Query: 64 FTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLEEE 123
F A+ Y + Q +LV+S T + +F +S RE+ V + D+P LV NK DL ++
Sbjct: 64 FDAITKAYYRGAQACVLVFSTTDRESFEAISSWREK--VVAEVGDIPTALVQNKIDLLDD 121
Query: 124 RVVS 127
+
Sbjct: 122 SCIK 125
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 63.5 bits (153), Expect = 3e-14
Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 4/126 (3%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGT 61
RE ++++LG GK+ + +F V+ PT+ ++ + L I D G
Sbjct: 1 RELRLLMLGLDNAGKTTILKKFNGE-DVDTISPTL---GFNIKTLEHRGFKLNIWDVGGQ 56
Query: 62 EQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLE 121
+ + Y ++ G I V + D + +L + +++ NK DL
Sbjct: 57 KSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLP 116
Query: 122 EERVVS 127
+
Sbjct: 117 GALSCN 122
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 63.6 bits (154), Expect = 4e-14
Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 17/136 (12%)
Query: 3 EYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTE 62
+++++LG+G GKS + Q V T + + + + D G
Sbjct: 6 THRLLLLGAGESGKSTIVKQMRILHVV----LTS---GIFETKFQVDKVNFHMFDVGGQR 58
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQST----------FNDLSDLREQILRVKDTDDVPMV 112
+ I V + ++ + + +L + I + + ++
Sbjct: 59 DERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVI 118
Query: 113 LVGNKCDLEEERVVSG 128
L NK DL E+V++G
Sbjct: 119 LFLNKQDLLAEKVLAG 134
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 62.7 bits (151), Expect = 4e-14
Identities = 23/123 (18%), Positives = 48/123 (39%), Gaps = 4/123 (3%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 64
+I+++G GK+ + + G + TI V+ + + D G ++
Sbjct: 2 RILMVGLDAAGKTTILYKLKLG----EIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 57
Query: 65 TAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLEEER 124
+ Y +N QG I V + N+ + ++L + D +++ NK DL
Sbjct: 58 RPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAM 117
Query: 125 VVS 127
+
Sbjct: 118 NAA 120
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 63.1 bits (152), Expect = 4e-14
Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 60
+ E ++ VLG GKS+L +F+ G + + + T + Y+K++ VDGQ ++ I
Sbjct: 3 IPELRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLI----- 56
Query: 61 TEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRV--KDTDDVPMVLVGNKC 118
E+ A + I V+S+ +++F +S L Q+ + + + + LVG +
Sbjct: 57 REEAGAPDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQD 116
Query: 119 DLEEE 123
+
Sbjct: 117 RISAS 121
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 63.1 bits (152), Expect = 5e-14
Identities = 24/136 (17%), Positives = 43/136 (31%), Gaps = 18/136 (13%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGT 61
RE K+++LG+G GKS + Q + ++ D G
Sbjct: 1 REVKLLLLGAGESGKSTIVKQMKIIHEAGTGIVET--------HFTFKDLHFKMFDVGGQ 52
Query: 62 EQFTAMRDLYMKNGQGFILVYSITAQST----------FNDLSDLREQILRVKDTDDVPM 111
+ I +++ ++ L + I K D +
Sbjct: 53 RSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSI 112
Query: 112 VLVGNKCDLEEERVVS 127
+L NK DL EE++
Sbjct: 113 ILFLNKKDLFEEKIKK 128
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 61.9 bits (149), Expect = 1e-13
Identities = 26/126 (20%), Positives = 43/126 (34%), Gaps = 4/126 (3%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGT 61
+E +I++LG GK+ L Q + Q Q L + D G
Sbjct: 15 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQS----QGFKLNVWDIGGQ 70
Query: 62 EQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLE 121
+ Y +N I V + F + ++L + VP+++ NK DL
Sbjct: 71 RKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLL 130
Query: 122 EERVVS 127
S
Sbjct: 131 TAAPAS 136
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 59.8 bits (143), Expect = 7e-13
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQG--IFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTA 59
Y++V++G GVGKS L F + ED+Y + + VDG+ + +LD
Sbjct: 2 TYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMW 61
Query: 60 -GTEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKC 118
+ + D M+ G +++VYSIT +++F S+LR Q+ R + T+D+P++LVGNK
Sbjct: 62 ENKGENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKS 121
Query: 119 D 119
D
Sbjct: 122 D 122
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 59.0 bits (141), Expect = 1e-12
Identities = 26/126 (20%), Positives = 43/126 (34%), Gaps = 4/126 (3%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGT 61
RE +I++LG G GK+ + + G V TI V + ++ D G
Sbjct: 4 REMRILILGLDGAGKTTILYRLQVGEVVT----TIPTIGFNVETVTYKNLKFQVWDLGGL 59
Query: 62 EQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLE 121
Y N I V + +L ++ +V+ NK D+E
Sbjct: 60 TSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDME 119
Query: 122 EERVVS 127
+ S
Sbjct: 120 QAMTSS 125
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 58.8 bits (141), Expect = 2e-12
Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 4/126 (3%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGT 61
+E +I++LG G GK+ + + G V + + + L + D G
Sbjct: 16 KELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVE----TLSYKNLKLNVWDLGGQ 71
Query: 62 EQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLE 121
Y + I V T + + S +L+ ++ D +++ NK D
Sbjct: 72 TSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQP 131
Query: 122 EERVVS 127
S
Sbjct: 132 GALSAS 137
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 58.9 bits (141), Expect = 2e-12
Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 4/126 (3%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGT 61
+E+K++++G GK+ + QF V E+ + D G
Sbjct: 14 QEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTI----GSNVEEIVINNTRFLMWDIGGQ 69
Query: 62 EQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLE 121
E + + Y N + I+V T + + + ++L +D +++ NK D++
Sbjct: 70 ESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVK 129
Query: 122 EERVVS 127
E V+
Sbjct: 130 ECMTVA 135
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 58.6 bits (140), Expect = 2e-12
Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Query: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQ 63
YK+++LG+ GVGKSAL F G+ +Y + + VDG++ L + D +
Sbjct: 2 YKVLLLGAPGVGKSALARIFG-GVEDGPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDG 60
Query: 64 FTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLEEE 123
+ M G +++VYS+T + +F S+LR Q+ R + TDDVP++LVGNK DL
Sbjct: 61 GRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRS 120
Query: 124 R 124
R
Sbjct: 121 R 121
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 57.8 bits (138), Expect = 4e-12
Identities = 22/122 (18%), Positives = 46/122 (37%), Gaps = 3/122 (2%)
Query: 3 EYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTE 62
E ++ ++G GK+ G F E PT+ ++ +++ D G
Sbjct: 2 EMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTV---GFNMRKITKGNVTIKLWDIGGQP 58
Query: 63 QFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLEE 122
+F +M + Y + + + Q + +L +P++++GNK DL
Sbjct: 59 RFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPG 118
Query: 123 ER 124
Sbjct: 119 AL 120
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 58.0 bits (139), Expect = 5e-12
Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 15/136 (11%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGT 61
RE K+++LG+G GKS Q PT D Q + ++D G
Sbjct: 1 RELKLLLLGTGESGKSTFIKQMRIIHG--SGVPTTGIIE---YPFDLQSVIFRMVDVGGQ 55
Query: 62 EQFTAMRDLYMKNGQGFILVYSITAQSTFNDLS----------DLREQILRVKDTDDVPM 111
+N + + +++ S L I+ + +
Sbjct: 56 RSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSV 115
Query: 112 VLVGNKCDLEEERVVS 127
+L NK DL EE+++
Sbjct: 116 ILFLNKKDLLEEKIMY 131
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 56.6 bits (135), Expect = 2e-11
Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 4/126 (3%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGT 61
+ K+V LG GK+ L + S E+ D G
Sbjct: 12 KTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSE----ELTIAGMTFTTFDLGGH 67
Query: 62 EQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLE 121
Q + Y+ G + + + + + ++ + +VP++++GNK D
Sbjct: 68 IQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRP 127
Query: 122 EERVVS 127
E
Sbjct: 128 EAISEE 133
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 55.8 bits (133), Expect = 4e-11
Identities = 19/123 (15%), Positives = 46/123 (37%), Gaps = 3/123 (2%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 64
++ +G GK+ L V+ + G + + + S +V + + I
Sbjct: 2 AVLFVGLCDSGKTLLFVRLLTGQYRDTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESLR 61
Query: 65 TAMRDLYMKNGQGFILVY-SITAQSTFNDLSDLREQILRVKDT--DDVPMVLVGNKCDLE 121
+ D + + + + V S Q D+++ Q+L + +++ NK D+
Sbjct: 62 FQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIA 121
Query: 122 EER 124
+
Sbjct: 122 MAK 124
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 52.8 bits (125), Expect = 3e-10
Identities = 23/123 (18%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 64
K++ LG GK+ L PT + E+ D G Q
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRLAT-LQPTW---HPTSEELAIGNIKFTTFDLGGHIQA 57
Query: 65 TAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCDLEEER 124
+ Y G + + F++ + + + + DVP V++GNK D
Sbjct: 58 RRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAV 117
Query: 125 VVS 127
+
Sbjct: 118 SEA 120
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 40.9 bits (95), Expect = 1e-05
Identities = 16/121 (13%), Positives = 28/121 (23%), Gaps = 11/121 (9%)
Query: 5 KIVVLGSGGVGKSAL------TVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDT 58
+ V G G GKS+ +G + + + + D
Sbjct: 58 NVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPN---VVFWDL 114
Query: 59 AGTEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKC 118
G D Y++ + Y + I + V K
Sbjct: 115 PGIGSTNFPPDTYLE--KMKFYEYDFFIIISATRFKKNDIDIAKAISMMKKEFYFVRTKV 172
Query: 119 D 119
D
Sbjct: 173 D 173
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 37.7 bits (86), Expect = 1e-04
Identities = 15/129 (11%), Positives = 34/129 (26%), Gaps = 9/129 (6%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGT 61
+ I++ G GK++L + + DG L
Sbjct: 2 YQPSIIIAGPQNSGKTSLLTLLTTDSVRPT---VVSQEPLSAADYDGSGVTLVDFPGHVK 58
Query: 62 EQ---FTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQI---LRVKDTDDVPMVLVG 115
+ ++ +V S ++ I + + +++
Sbjct: 59 LRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIAC 118
Query: 116 NKCDLEEER 124
NK +L R
Sbjct: 119 NKSELFTAR 127
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium
pasteurianum [TaxId: 1501]}
Length = 269
Score = 31.1 bits (69), Expect = 0.025
Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Query: 1 MREYKIVVLGSGGVGKSALTV 21
MR ++ + G GG+GKS T
Sbjct: 1 MR--QVAIYGKGGIGKSTTTQ 19
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 30.6 bits (68), Expect = 0.035
Identities = 15/137 (10%), Positives = 39/137 (28%), Gaps = 10/137 (7%)
Query: 1 MREYKIVVLGSGGVGKSALTVQFV-QGIF-VEKYDPTIEDSYRKQVEVDGQQ----CMLE 54
+ I+V+G GGVGKS+ + + + + + G
Sbjct: 30 VNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPG 89
Query: 55 ILDT-AGTEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLR--EQILRVKDTD-DVP 110
+++ + + ++ + +L+Y + D D + I
Sbjct: 90 LIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNK 149
Query: 111 MVLVGNKCDLEEERVVS 127
++ +
Sbjct: 150 AIVALTHAQFSPPDGLP 166
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter
vinelandii [TaxId: 354]}
Length = 289
Score = 30.6 bits (68), Expect = 0.044
Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Query: 1 MREYKIVVLGSGGVGKSALTV 21
MR + + G GG+GKS T
Sbjct: 2 MR--QCAIYGKGGIGKSTTTQ 20
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 204
Score = 29.5 bits (66), Expect = 0.069
Identities = 25/138 (18%), Positives = 42/138 (30%), Gaps = 28/138 (20%)
Query: 6 IVVLGSGGVGKSALT--------VQFVQGIFVEKYDPTIEDSYRKQ--------VEVDGQ 49
+ +G GK+ LT + + D R + VE +
Sbjct: 6 VGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETA 65
Query: 50 QCMLEILDTAGTEQFTAMRDLYMKNGQGFILVYS----ITAQSTFNDLSDLREQILRVKD 105
+ +D G + G ILV S Q+ RE IL +
Sbjct: 66 KRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQT--------REHILLARQ 117
Query: 106 TDDVPMVLVGNKCDLEEE 123
+V+ NK D+ ++
Sbjct: 118 VGVPYIVVFMNKVDMVDD 135
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 29.3 bits (64), Expect = 0.094
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 5 KIVVLGSGGVGKSALTVQFVQ--GIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTE 62
K+ ++G VGKS L + V T D +V +DG++ + +DTAG
Sbjct: 10 KVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYV--FVDTAGLR 67
Query: 63 QFTAMRDLYMKNGQGFILVYSI 84
+ + + ++ + +V SI
Sbjct: 68 RKSRVEPRTVEKYSNYRVVDSI 89
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 296
Score = 28.0 bits (61), Expect = 0.28
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 6 IVVLGSGGVGKSALTV 21
+ G GGVGK++++
Sbjct: 11 LFFTGKGGVGKTSISC 26
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE
{Escherichia coli [TaxId: 562]}
Length = 170
Score = 27.2 bits (59), Expect = 0.42
Identities = 7/34 (20%), Positives = 15/34 (44%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIED 38
+I+++G+GG + L V + T+
Sbjct: 20 RILLIGAGGASRGVLLPLLSLDCAVTITNRTVSR 53
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 27.5 bits (60), Expect = 0.43
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 1 MREYKIVVLGSGGVGKSA 18
+RE+ VV+G+GG G A
Sbjct: 5 VREFDAVVIGAGGAGMRA 22
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase
TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 27.0 bits (58), Expect = 0.55
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 5 KIVVLGSGGVGKSALTVQFVQ 25
K+V+ G GKS+L
Sbjct: 3 KVVIAGRPNAGKSSLLNALAG 23
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 26.9 bits (58), Expect = 0.64
Identities = 7/21 (33%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Query: 4 YKIVVL-GSGGVGKSALTVQF 23
+ +++L G GGVGK+ +
Sbjct: 20 HGLIMLMGKGGVGKTTMAAAI 40
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE
{Haemophilus influenzae [TaxId: 727]}
Length = 171
Score = 26.4 bits (57), Expect = 0.81
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE 37
+++LG+GG K L + + T
Sbjct: 20 HVLILGAGGATKGVLLPLLQAQQNIVLANRTFS 52
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB
{Methylobacterium extorquens [TaxId: 408]}
Length = 323
Score = 26.8 bits (58), Expect = 0.84
Identities = 7/35 (20%), Positives = 13/35 (37%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTI 36
R ++ + G GVGKS + + +
Sbjct: 50 RAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAV 84
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 341
Score = 26.6 bits (58), Expect = 0.88
Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 5/92 (5%)
Query: 31 KYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFILVYSITAQSTF 90
+ + ED + + DG ++ ++D+ G F++ ++ G ++V
Sbjct: 76 YSEMSDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCV 135
Query: 91 NDLSDLREQILRVKDTDDVPMVLVGNKCDLEE 122
E +LR + + V+V NK D
Sbjct: 136 QT-----ETVLRQALGERIKPVVVINKVDRAL 162
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like
protein HI0607 {Haemophilus influenzae [TaxId: 727]}
Length = 167
Score = 26.4 bits (57), Expect = 0.91
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGI 27
K++V GSGG+ K+ + G
Sbjct: 19 KVIVHGSGGMAKAVVAAFKNSGF 41
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 26.7 bits (58), Expect = 0.92
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 2 REYKIVVLGSGGVGKSALTVQFVQ 25
++ V G+ G GKS F
Sbjct: 53 NTLRLGVTGTPGAGKSTFLEAFGM 76
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium
longum, strain am101-2 [TaxId: 216816]}
Length = 143
Score = 26.1 bits (57), Expect = 0.98
Identities = 12/48 (25%), Positives = 19/48 (39%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCM 52
K+ V+G+G VG + +GI E I + +D Q
Sbjct: 3 KLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGS 50
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 26.5 bits (57), Expect = 0.98
Identities = 10/96 (10%), Positives = 25/96 (26%)
Query: 6 IVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFT 65
++ GG GKS L +Q I + + V + +
Sbjct: 32 GALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHRLHALGA 91
Query: 66 AMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQIL 101
+ + +L+ + + + +
Sbjct: 92 HLSAEERQAVADGLLIQPLIGSLPNIMAPEWFDGLK 127
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 26.5 bits (57), Expect = 1.0
Identities = 15/72 (20%), Positives = 25/72 (34%), Gaps = 3/72 (4%)
Query: 3 EYKIVVLGSGGVGKSA---LTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTA 59
+ ++VVLGSG +G S+ L + + + P S G + T
Sbjct: 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTD 65
Query: 60 GTEQFTAMRDLY 71
G Q +
Sbjct: 66 GPRQAKWEESTF 77
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase),
helicase domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 26.1 bits (56), Expect = 1.1
Identities = 9/47 (19%), Positives = 14/47 (29%)
Query: 6 IVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCM 52
I+V G+GKS Q + VE + +
Sbjct: 38 IMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLEESVEETAEDLI 84
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 232
Score = 26.3 bits (56), Expect = 1.3
Identities = 9/24 (37%), Positives = 12/24 (50%), Gaps = 3/24 (12%)
Query: 1 MREYKIVVL-GSGGVGKSALTVQF 23
+R I V G GG GK+ +T
Sbjct: 1 VR--TITVASGKGGTGKTTITANL 22
>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 177
Score = 25.8 bits (55), Expect = 1.5
Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 8/68 (11%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 64
IV+ G+GG ++ F D I + R + + + +
Sbjct: 20 NIVIYGAGGAARAV--------AFELAKDNNIIIANRTVEKAEALAKEIAEKLNKKFGEE 71
Query: 65 TAMRDLYM 72
L +
Sbjct: 72 VKFSGLDV 79
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 237
Score = 25.8 bits (55), Expect = 1.5
Identities = 7/21 (33%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Query: 5 KIVVLGS--GGVGKSALTVQF 23
+I+ + S GG GK+ +T
Sbjct: 3 RIISIVSGKGGTGKTTVTANL 23
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO
{Bacillus sp. [TaxId: 1409]}
Length = 276
Score = 25.9 bits (55), Expect = 1.6
Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 3/43 (6%)
Query: 2 REYKIVVLGSGGVGKSA---LTVQFVQGIFVEKYDPTIEDSYR 41
R Y+ VV+G G +G + L + E +
Sbjct: 3 RHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSA 45
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB
{Escherichia coli [TaxId: 562]}
Length = 182
Score = 25.7 bits (55), Expect = 1.7
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIF 28
+V+LG+GG + ++G+
Sbjct: 20 TMVLLGAGGASTAIGAQGAIEGLK 43
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 25.7 bits (55), Expect = 1.7
Identities = 14/123 (11%), Positives = 33/123 (26%), Gaps = 5/123 (4%)
Query: 6 IVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFT 65
IV++G GK+ ++ + + + + + + ++ E E
Sbjct: 5 IVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEEGLK 64
Query: 66 AMRDLYMKNGQGFILVYSITAQSTF-----NDLSDLREQILRVKDTDDVPMVLVGNKCDL 120
+ + S N + R I + + V + C
Sbjct: 65 IRKQCALAALNDVRKFLSEEGGHVAVFDATNTTRERRAMIFNFGEQNGYKTFFVESICVD 124
Query: 121 EEE 123
E
Sbjct: 125 PEV 127
>d1zcza1 c.24.1.3 (A:1-157) IMP cyclohydrolase domain of
bifunctional purine biosynthesis enzyme ATIC {Thermotoga
maritima [TaxId: 2336]}
Length = 157
Score = 25.4 bits (55), Expect = 1.9
Identities = 10/59 (16%), Positives = 20/59 (33%)
Query: 54 EILDTAGTEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMV 112
EI ++GT +F + + ++ ++ IL + DV V
Sbjct: 27 EIWASSGTAKFLKSNGIEANDVSTITGFENLLGGLVKTLHPEIFAGILGPEPRWDVVFV 85
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice
blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Length = 182
Score = 25.4 bits (54), Expect = 2.3
Identities = 18/123 (14%), Positives = 39/123 (31%), Gaps = 5/123 (4%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-----KQVEVDGQQCMLEILDTA 59
+++LGSG V + L V GI V T+E + + + + A
Sbjct: 4 SVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDA 63
Query: 60 GTEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDDVPMVLVGNKCD 119
+ + L ++ +I + S + ++ + + V N+
Sbjct: 64 EVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIG 123
Query: 120 LEE 122
Sbjct: 124 YSA 126
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 25.5 bits (54), Expect = 2.4
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 6 IVVLGSGGVGKSALTVQFVQGI 27
+VLG GKS++ + +
Sbjct: 32 TLVLGLRRTGKSSIIKIGINEL 53
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma
gondii [TaxId: 5811]}
Length = 154
Score = 25.0 bits (54), Expect = 2.5
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 1 MREYKIVVLGSGGVGKSA 18
R K+ ++GSG +G +
Sbjct: 5 QRRKKVAMIGSGMIGGTM 22
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 25.0 bits (53), Expect = 3.0
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 6 IVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDS 39
+V G+ G GK+ ++QF+ +E +P + +
Sbjct: 29 TLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVT 62
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal
(G) domain {Archaeon Sulfolobus solfataricus [TaxId:
2287]}
Length = 224
Score = 25.2 bits (54), Expect = 3.0
Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 3/82 (3%)
Query: 44 VEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFILVYSIT---AQSTFNDLSDLREQI 100
+ + ++ I+D G F ILV S ++ + RE I
Sbjct: 74 MRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSVEGQTREHI 133
Query: 101 LRVKDTDDVPMVLVGNKCDLEE 122
+ K +++ NK DL E
Sbjct: 134 ILAKTMGLDQLIVAVNKMDLTE 155
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 24.6 bits (53), Expect = 3.6
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVE 30
+ KI V+G G VG + + + E
Sbjct: 18 VPNNKITVVGVGQVGMACAISILGKSLADE 47
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 24.6 bits (53), Expect = 3.8
Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCM 52
KI ++G+G VG S + I + + +D +
Sbjct: 3 KISIIGAGFVG-STTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEAS 49
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 24.6 bits (53), Expect = 3.8
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCM 52
++VV+G+G VG S + QGI E +S +D
Sbjct: 8 RVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGK 55
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 24.3 bits (52), Expect = 4.0
Identities = 13/66 (19%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 64
KIV++GSG +G + VQ + I + +D +
Sbjct: 5 KIVLVGSGMIG-GVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS 63
Query: 65 TAMRDL 70
DL
Sbjct: 64 NTYDDL 69
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase,
L-HICDH {Lactobacillus confusus [TaxId: 1583]}
Length = 146
Score = 24.3 bits (52), Expect = 4.0
Identities = 12/48 (25%), Positives = 21/48 (43%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCM 52
KI ++G G VG + QG+ + ++ K ++D Q M
Sbjct: 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAM 50
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 24.3 bits (51), Expect = 4.6
Identities = 18/135 (13%), Positives = 36/135 (26%), Gaps = 18/135 (13%)
Query: 6 IVVLGSGGVGKSAL-----------------TVQFVQGIFVEKYDPTIEDSYRKQVEVDG 48
I+ G VGKS L T + ++ + +
Sbjct: 3 IIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKIIEIEWKNHKIIDMPGFGFMMGLPKE 62
Query: 49 QQCMLEILDTAGTEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQILRVKDTDD 108
Q ++ E D+ + G I + + + + D
Sbjct: 63 VQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIK-RWEKRGEIPIDVEFYQFLRELD 121
Query: 109 VPMVLVGNKCDLEEE 123
+P ++ NK D +
Sbjct: 122 IPTIVAVNKLDKIKN 136
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 24.2 bits (52), Expect = 4.9
Identities = 13/48 (27%), Positives = 19/48 (39%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCM 52
K+V++G G VG S QGI E + K +D +
Sbjct: 7 KVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ 54
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal
domain {Bacillus subtilis [TaxId: 1423]}
Length = 231
Score = 24.3 bits (52), Expect = 5.0
Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 5/102 (4%)
Query: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLE----IL 56
++ V G GVGKS + + + + E R + + + +
Sbjct: 95 FQDKTTVFAGQSGVGKS-SLLNAISPELGLRTNEISEHLGRGKHTTRHVELIHTSGGLVA 153
Query: 57 DTAGTEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLRE 98
DT G + G F + ++ F L+E
Sbjct: 154 DTPGFSSLEFTDIEEEELGYTFPDIREKSSSCKFRGCLHLKE 195
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 142
Score = 24.2 bits (52), Expect = 5.2
Identities = 9/48 (18%), Positives = 18/48 (37%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCM 52
K+ ++G+G VG SA ++ E + +D +
Sbjct: 3 KVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGL 50
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 24.3 bits (51), Expect = 5.2
Identities = 9/49 (18%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Query: 6 IVVLGSGGVGKSALTVQFVQG--IFVEKYDPTIEDSYRKQVEVDGQQCM 52
+ ++G VGKS L + + T R + +Q +
Sbjct: 8 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIV 56
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 24.2 bits (51), Expect = 5.3
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 60
++V++G VGKS L + + D E+ + + I+DTAG
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAG 57
>d2jfga1 c.5.1.1 (A:1-93)
UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
{Escherichia coli [TaxId: 562]}
Length = 93
Score = 23.5 bits (50), Expect = 5.3
Identities = 7/48 (14%), Positives = 18/48 (37%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCM 52
+V++G G G S + +G+ D + ++ ++
Sbjct: 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHT 54
>d1t94a1 d.240.1.1 (A:411-515) DNA polymerase kappa {Human (Homo
sapiens) [TaxId: 9606]}
Length = 105
Score = 23.8 bits (51), Expect = 5.6
Identities = 5/17 (29%), Positives = 12/17 (70%)
Query: 83 SITAQSTFNDLSDLREQ 99
S++ + TF++++ EQ
Sbjct: 5 SMSVERTFSEINKAEEQ 21
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 23.8 bits (51), Expect = 6.2
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 1 MREYKIVVLGSGGVGKSA 18
+ KI V+G G VG +
Sbjct: 17 LSRCKITVVGVGDVGMAC 34
>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter
jejuni [TaxId: 197]}
Length = 193
Score = 23.7 bits (50), Expect = 6.8
Identities = 9/46 (19%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Query: 5 KIVVLGSGGVGKS----ALTVQFVQGIFVEKYDPTIEDSYRKQVEV 46
KI + G+ G G A + + + IF++ + +S + +
Sbjct: 4 KIYIYGASGHGLVCEDVAKNMGYKECIFLDDFKGMKFESTLPKYDF 49
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase
{Trypanosome (Leishmania mexicana) [TaxId: 5665]}
Length = 189
Score = 23.6 bits (50), Expect = 7.2
Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
Query: 5 KIVVLGSGGVGKSALTVQF 23
K VV GSG G +AL +
Sbjct: 9 KAVVFGSGAFG-TALAMVL 26
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 276
Score = 23.9 bits (51), Expect = 7.4
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 13/75 (17%)
Query: 49 QQCMLEILDTAGTEQFTAMRDLYMKNGQGFILVYS----ITAQSTFNDLSDLREQILRVK 104
+ + I+D G FT + M+ G I+V+ + QS E + R
Sbjct: 69 KDHRINIIDAPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQS---------ETVWRQA 119
Query: 105 DTDDVPMVLVGNKCD 119
+ VP + NK D
Sbjct: 120 EKYKVPRIAFANKMD 134
>d1xfia_ e.50.1.1 (A:) Hypothetical protein At2g17340 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 360
Score = 24.0 bits (52), Expect = 7.9
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 91 NDLSDLREQILRVKDTDD 108
L LREQ+LR D
Sbjct: 96 ILLCRLREQVLRELGFRD 113
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 140
Score = 23.5 bits (50), Expect = 8.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 5 KIVVLGSGGVG 15
KI ++G G VG
Sbjct: 2 KIGIVGLGRVG 12
>d1zeta1 d.240.1.1 (A:300-414) DNA polymerase iota {Human (Homo
sapiens) [TaxId: 9606]}
Length = 115
Score = 23.1 bits (49), Expect = 8.7
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 83 SITAQSTFNDLSDLRE 98
S + + +F S E
Sbjct: 2 SFSEEDSFKKCSSEVE 17
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain
{Caenorhabditis elegans [TaxId: 6239]}
Length = 277
Score = 23.6 bits (50), Expect = 9.3
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 6 IVVLGSGGVGKSALTVQFVQ 25
+ + G G GKS + Q +
Sbjct: 47 LFLHGRAGSGKSVIASQALS 66
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 142
Score = 23.1 bits (49), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 5 KIVVLGSGGVGKSALTVQFVQGIFVE 30
KI V+G+G VG + + + E
Sbjct: 2 KITVIGAGNVGATTAFRLAEKQLARE 27
>d1pc6a_ d.262.1.1 (A:) NinB {Bacteriophage lambda [TaxId: 10710]}
Length = 141
Score = 23.3 bits (50), Expect = 9.9
Identities = 13/59 (22%), Positives = 24/59 (40%)
Query: 42 KQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFILVYSITAQSTFNDLSDLREQI 100
+QVE G+ E T + G GF+++ T++ + ++L E I
Sbjct: 58 RQVEWHGRWLDAESWKCVFTAALKQQDVVPNLAGNGFVVIGQSTSRMRVGEFAELLELI 116
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.137 0.380
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 474,081
Number of extensions: 20767
Number of successful extensions: 296
Number of sequences better than 10.0: 1
Number of HSP's gapped: 266
Number of HSP's successfully gapped: 129
Length of query: 128
Length of database: 2,407,596
Length adjustment: 75
Effective length of query: 53
Effective length of database: 1,377,846
Effective search space: 73025838
Effective search space used: 73025838
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (22.9 bits)