BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7843
(255 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A8AAV7|PIMT_IGNH4 Protein-L-isoaspartate O-methyltransferase OS=Ignicoccus hospitalis
(strain KIN4/I / DSM 18386 / JCM 14125) GN=pcm PE=3 SV=1
Length = 211
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
Query: 119 KTHFMVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQ 178
K ++ +LI +GY+K V EAM +V +E F P + + D P+ +G G + P+
Sbjct: 4 KKRELIRNLIAEGYIKRKEVAEAMMKVPRELFVPEELRHMAYEDTPLPIGAGQTISAPHM 63
Query: 179 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
++E + L+ GDKVLE+GTGSGY + +VG G VYTIE IPEL E AR+R+K
Sbjct: 64 VAYMVE--AAELRRGDKVLEVGTGSGYHAAVMAELVGPEGHVYTIERIPELAERARERLK 121
Query: 239 A 239
A
Sbjct: 122 A 122
>sp|Q42539|PIMT_ARATH Protein-L-isoaspartate O-methyltransferase OS=Arabidopsis thaliana
GN=PCM PE=2 SV=3
Length = 230
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
Query: 119 KTHFMVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQ 178
K MV +L G V S V +AM VD+ F + + D P+ +GY + P+
Sbjct: 12 KNKAMVENLQNHGIVTSDEVAKAMEAVDRGVF--VTDRSSAYVDSPMSIGYNVTISAPHM 69
Query: 179 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
H + L+LL HLK G +VL++G+G+GYLT F MVG G+ +EHIPEL+ ++ K ++
Sbjct: 70 HAMCLQLLEKHLKPGMRVLDVGSGTGYLTACFAVMVGTEGRAIGVEHIPELVASSVKNIE 129
Query: 239 AKAET 243
A A +
Sbjct: 130 ASAAS 134
>sp|Q27873|PIMT_CAEEL Protein-L-isoaspartate O-methyltransferase OS=Caenorhabditis
elegans GN=pcm-1 PE=2 SV=1
Length = 225
Score = 90.5 bits (223), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
++++L S R +AM+ VD+ +FAP P + D P +GY + P+ H
Sbjct: 13 LIDNLRNNRVFASQRAYDAMKSVDRGDFAPRAPYE----DAPQRIGYNATVSAPHMHAAA 68
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAE 242
L+ L HL G K L++G+GSGYLT MVG +G V IEH+P+L+E + K ++
Sbjct: 69 LDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSEKNIRKHHS 128
Query: 243 TYIKRIN 249
++R N
Sbjct: 129 EQLERGN 135
>sp|O26915|PIMT_METTH Protein-L-isoaspartate O-methyltransferase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pcm PE=3 SV=1
Length = 217
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
MV DL+ +GY+KS V AM V +EEF P D + + + D P+ +G G + P+ ++
Sbjct: 8 MVQDLMERGYIKSEAVRRAMERVPREEFVPEDEMHRAYMDMPLPIGEGQTISAPHMVAMI 67
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 239
E+L L+ G KVLEIGTG GY + ++G G +YT+E I L E ARK++++
Sbjct: 68 AEILD--LEPGMKVLEIGTGCGYNAAVIAEIIGPEGHLYTVERIGILYERARKKLRS 122
>sp|A7HL14|PIMT_FERNB Protein-L-isoaspartate O-methyltransferase OS=Fervidobacterium
nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=pcm
PE=3 SV=1
Length = 199
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 132 YVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGHLK 191
Y S +++EAM +VD++ F P + + + D P+ +GYG + P+ ++ E L LK
Sbjct: 9 YGVSRKIIEAMNKVDRKLFVPSELQESAYLDIPLPIGYGQTISAPHMVGMMCEYL--ELK 66
Query: 192 YGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRV 237
GD+VLEIGTGSGY + +VG SG +YTIE IPEL++ A+KR+
Sbjct: 67 DGDRVLEIGTGSGYNAAVMSLLVGESGWIYTIERIPELVQEAQKRI 112
>sp|Q92047|PIMT_DANRE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Danio
rerio GN=pcmt PE=2 SV=3
Length = 228
Score = 87.4 bits (215), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 4/123 (3%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
+VN+L G +KS RV E M D+ F+ +P + D P +GY + P+ H
Sbjct: 13 LVNNLRKNGIIKSDRVYEVMLATDRSHFSRCNP----YMDSPQSIGYQATISAPHMHAYA 68
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAE 242
LELL HL G K L++G+GSG L+ F MVG +GKV I+HI EL+E + VK
Sbjct: 69 LELLHDHLYEGAKALDVGSGSGILSVCFSRMVGPTGKVIGIDHIKELVEDSIANVKKDDP 128
Query: 243 TYI 245
+ I
Sbjct: 129 SLI 131
>sp|A6UWM1|PIMT_META3 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=pcm PE=3
SV=1
Length = 216
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Query: 119 KTHFMVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQ 178
K +V LI GY+K+ V +A+ V + EF P + D + D P+++G+G + +
Sbjct: 5 KMEAIVKGLINAGYLKNKMVSKALLTVPRHEFIPAELHDYAYVDTPLNIGHGQTISAIHM 64
Query: 179 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
++ + L LK GDKVLEIGTGSGY + +VG +G+V TIE IPEL E A +K
Sbjct: 65 VAIICDALD--LKEGDKVLEIGTGSGYHAAVVAEIVGKNGQVITIERIPELAEKAESTLK 122
Query: 239 AKAETYIKRI 248
T +K I
Sbjct: 123 KLGYTNVKVI 132
>sp|Q9GPS6|PIMT_DICDI Probable protein-L-isoaspartate O-methyltransferase
OS=Dictyostelium discoideum GN=pcmA PE=3 SV=1
Length = 316
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Query: 130 KGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGH 189
K V + +VE ++ VD++ F ++ +YD P +GY + P+ H L+L+LL+
Sbjct: 62 KRMVLNKTIVETLKFVDRKLFLENKNVENPYYDEPKPIGYNATISAPHMHALMLDLLADR 121
Query: 190 LKYGDKV-LEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRI 248
+ + V L+IG+GSGY+T G ++G +G+V +EHIPEL+E + + +K T + RI
Sbjct: 122 IPMSNGVALDIGSGSGYVTACLGHLMGCTGRVIGVEHIPELIERSIESIKRLDSTLLDRI 181
Query: 249 NF 250
F
Sbjct: 182 QF 183
>sp|Q8TYL4|PIMT_METKA Protein-L-isoaspartate O-methyltransferase OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pcm
PE=3 SV=1
Length = 226
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
+V L GY++S RV EAM +V + EF P D D+ + D P+ +G G + P+ ++
Sbjct: 15 LVERLKSLGYIRSNRVAEAMLKVPRHEFVPEDLRDRAYVDSPLPIGRGQTISAPHMVAIM 74
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
ELL + G KVLE+G GSGY + +V G+V T+E IPEL + AR +K
Sbjct: 75 TELLDP--RPGHKVLEVGAGSGYHAAVVAELVKPDGRVITVERIPELADFARNNLK 128
>sp|Q43209|PIMT_WHEAT Protein-L-isoaspartate O-methyltransferase OS=Triticum aestivum
GN=PCM PE=1 SV=1
Length = 230
Score = 84.3 bits (207), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 74/138 (53%), Gaps = 6/138 (4%)
Query: 112 YVEPAAYKTHFMVNDLIGKGYVKSVRVVEAMREVDKEEFAP--MDPLDKGHYDYPIDLGY 169
+ E + K + +V L G V++ +V E M +D+ F P P + D P+ +GY
Sbjct: 5 WAEGSLEKNNALVEYLKQYGVVRTDKVAEVMETIDRALFVPEGFTP----YTDSPMPIGY 60
Query: 170 GTWMEPPYQHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPEL 229
+ P+ H LELL +L+ G L++G+GSGYLT F MVG G+ IEHIPEL
Sbjct: 61 NATISAPHMHATCLELLKDYLQPGMHALDVGSGSGYLTACFAMMVGPEGRAVGIEHIPEL 120
Query: 230 LEAARKRVKAKAETYIKR 247
+ A+ + V+ A + +
Sbjct: 121 VVASTENVERSAAAALMK 138
>sp|O27962|PIMT2_ARCFU Protein-L-isoaspartate O-methyltransferase 2 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=pcm2 PE=3 SV=1
Length = 219
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 135 SVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGHLKYGD 194
S +V EA+R+V + F P ++ + D P+ +GYG + P+ ++ ELL L+ GD
Sbjct: 21 SRKVYEAIRKVPRHLFVPESYKNEAYVDTPLPIGYGQTISAPHMVAIMCELLD--LREGD 78
Query: 195 KVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 239
KVLE+GTG GY + +VG SGKV +IE+IPEL E AR +KA
Sbjct: 79 KVLEVGTGCGYHAAVTAEIVGKSGKVISIEYIPELAERARAILKA 123
>sp|Q57636|PIMT_METJA Protein-L-isoaspartate O-methyltransferase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=pcm PE=1 SV=1
Length = 215
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 78/133 (58%), Gaps = 10/133 (7%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
++ LI +GY+KS RV++A+ +V +EEF P + + D P+++GYG + + ++
Sbjct: 10 VIEKLIREGYIKSKRVIDALLKVPREEFLPEHLKEYAYVDTPLEIGYGQTISAIHMVGMM 69
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAE 242
ELL LK G KVLEIGTG GY + +VG G V +IE IPEL E KAE
Sbjct: 70 CELLD--LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAE--------KAE 119
Query: 243 TYIKRINFYEIIV 255
++++ + +IV
Sbjct: 120 RTLRKLGYDNVIV 132
>sp|Q9URZ1|PIMT_SCHPO Probable protein-L-isoaspartate O-methyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pcm2 PE=3 SV=1
Length = 230
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
+V L+ ++ + R ++AM + + P+ P + D P +GYG + P+ H
Sbjct: 13 LVQHLVESKFLTNQRAIKAMNATSRSFYCPLSP----YMDSPQSIGYGVTISAPHMHATA 68
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAE 242
L+ L L+ G L+IG+GSGYL MV +G V IEHIP+L+E ++K +
Sbjct: 69 LQELEPVLQPGCSALDIGSGSGYLVAAMARMVAPNGTVKGIEHIPQLVETSKKNL----- 123
Query: 243 TYIKRINFYEIIV 255
+K IN E+++
Sbjct: 124 --LKDINHDEVLM 134
>sp|P22061|PIMT_HUMAN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Homo
sapiens GN=PCMT1 PE=1 SV=4
Length = 227
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
++++L G +K+ +V E M D+ +A +P + D P +G+ + P+ H
Sbjct: 13 LIHNLRKNGIIKTDKVFEVMLATDRSHYAKCNP----YMDSPQSIGFQATISAPHMHAYA 68
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAE 242
LELL L G K L++G+GSG LT F MVG +GKV I+HI EL++ + V+
Sbjct: 69 LELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDP 128
Query: 243 TYI 245
T +
Sbjct: 129 TLL 131
>sp|P15246|PIMT_BOVIN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Bos
taurus GN=PCMT1 PE=1 SV=2
Length = 227
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 4/116 (3%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
++++L G +K+ +V E M D+ +A +P + D P +G+ + P+ H
Sbjct: 13 LIHNLRKNGIIKTDKVFEVMLATDRSHYAKCNP----YMDSPQSIGFQATISAPHMHAYA 68
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
LELL L G K L++G+GSG LT F MVG SGKV I+HI EL++ + V+
Sbjct: 69 LELLFDQLNEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKELVDDSINNVR 124
>sp|A0B9U1|PIMT_METTP Protein-L-isoaspartate O-methyltransferase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=pcm PE=3 SV=1
Length = 210
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 130 KGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGH 189
+ YV S RVVEAM V +E F P + + D P+ +G+G + P+ ++ +LL
Sbjct: 11 RNYV-SERVVEAMSRVPRELFVPEELRPMAYEDRPLPIGHGQTISAPHMVAMMCDLLD-- 67
Query: 190 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
L+ G KVLE+G G GY + +VG SG VY++E IPEL+E AR+ ++
Sbjct: 68 LREGMKVLEVGGGCGYHAAVMAELVGPSGHVYSVERIPELVEMARRNLE 116
>sp|P23506|PIMT_MOUSE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus
musculus GN=Pcmt1 PE=1 SV=3
Length = 227
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 4/116 (3%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
++++L G +K+ +V E M D+ +A +P + D P +G+ + P+ H
Sbjct: 13 LIHNLRKNGIIKTDKVFEVMLATDRSHYAKSNP----YMDSPQSIGFQATISAPHMHAYA 68
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
LELL L G K L++G+GSG LT F MVG SGKV I+HI EL++ + VK
Sbjct: 69 LELLFDQLHEGAKALDVGSGSGILTACFARMVGNSGKVIGIDHIKELVDDSITNVK 124
>sp|Q5RA89|PIMT_PONAB Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Pongo
abelii GN=PCMT1 PE=2 SV=3
Length = 227
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
++++L G +K+ +V E M D+ +A +P + D P +G+ + P+ H
Sbjct: 13 LIHNLRKNGIIKTDKVFEVMLATDRSHYAKCNP----YMDSPQSIGFQATISAPHMHAYA 68
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAE 242
LELL L G K L++G+GSG LT F MVG +GKV I+HI EL++ + V+
Sbjct: 69 LELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDP 128
Query: 243 TYI 245
T +
Sbjct: 129 TLL 131
>sp|Q5F3N1|PIMT_CHICK Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Gallus
gallus GN=PCMT1 PE=2 SV=3
Length = 228
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
++++L G +KS +V E M D+ +A +P + D P +G+ + P+ H
Sbjct: 13 LIHNLRKNGIIKSDKVFEVMLATDRCHYAKYNP----YMDSPQSIGFQATISAPHMHAYA 68
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAE 242
LELLS L G K L++G+GSG LT F MVG G+V I+HI EL++ + VK
Sbjct: 69 LELLSDQLHEGAKALDVGSGSGILTACFSRMVGPKGQVVGIDHIKELVDDSINNVKKDDP 128
Query: 243 TYI 245
T +
Sbjct: 129 TLL 131
>sp|Q4R5H0|PIMT_MACFA Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Macaca
fascicularis GN=PCMT1 PE=2 SV=3
Length = 227
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
++++L G +K+ +V E M D+ +A +P + D P +G+ + P+ H
Sbjct: 13 LIHNLRKNGIIKTDKVFEVMLATDRSHYAECNP----YMDSPQSIGFQATISAPHMHAYA 68
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAE 242
LELL L G K L++G+GSG LT F MVG +GKV I+HI EL++ + V+
Sbjct: 69 LELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDP 128
Query: 243 TYI 245
T +
Sbjct: 129 TLL 131
>sp|A6LNM3|PIMT_THEM4 Protein-L-isoaspartate O-methyltransferase OS=Thermosipho
melanesiensis (strain BI429 / DSM 12029) GN=pcm PE=3
SV=1
Length = 198
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
Query: 130 KGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGH 189
K Y S ++EAM ++D++ F P + D + D P+ +G+G + P+ ++ + L
Sbjct: 6 KRYGVSKNIIEAMNKIDRKYFVPENVKDLAYDDIPLPIGFGQTISAPHMVGIMCKELD-- 63
Query: 190 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRI 248
LK DKVLEIGTGSGY + +VG SG +YTIE I +L + A KR K T I I
Sbjct: 64 LKEKDKVLEIGTGSGYNAAVMSLLVGKSGHIYTIERIKQLYKIATKRFKQFGLTNITCI 122
>sp|P22062|PIMT_RAT Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus
norvegicus GN=Pcmt1 PE=1 SV=2
Length = 227
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 4/116 (3%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
++++L G +K+ +V E M D+ +A +P + D P +G+ + P+ H
Sbjct: 13 LIHNLRKNGIIKTDKVFEVMLATDRSHYAKSNP----YMDSPQSIGFQATISAPHMHAYA 68
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
LELL L G K L++G+GSG LT F MVG SGKV I+HI EL++ + VK
Sbjct: 69 LELLFDQLHEGAKALDVGSGSGILTACFARMVGHSGKVIGIDHIKELVDDSITNVK 124
>sp|P80895|PIMT_PIG Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Sus
scrofa GN=PCMT1 PE=1 SV=3
Length = 227
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 4/116 (3%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
++++L G +K+ +V E M D+ +A +P + D P +G+ + P+ H
Sbjct: 13 LIHNLRKNGIIKTDKVFEVMLATDRSHYAKCNP----YMDSPQSIGFQATISAPHMHAYA 68
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
LELL L G K L++G+GSG LT F MVG SGKV I+HI EL++ + V+
Sbjct: 69 LELLFDQLHEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKELVDDSINNVR 124
>sp|A9A8I9|PIMT_METM6 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=pcm PE=3 SV=1
Length = 212
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
+V +LI KGY+K V++A+ V + +F P + + + D P+ +G G + + ++
Sbjct: 9 VVGNLISKGYIKKQSVIDALMSVPRHKFLPKNMEEYAYIDSPLGIGCGQTISAIHMVGIM 68
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARK 235
E L L G VLE+GTGSGY + +VG SGKV T+E IPEL E +++
Sbjct: 69 CEELD--LNMGQNVLEVGTGSGYQAAVVSKIVGESGKVTTVERIPELFEKSKQ 119
>sp|Q6M116|PIMT_METMP Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain S2 / LL) GN=pcm PE=3 SV=1
Length = 212
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
++ +LI +GY+K V++A+ V + +F + D P+++GYG + + ++
Sbjct: 9 VIENLISRGYIKKQSVIDAILSVPRHKFISKSMESYAYVDSPLEIGYGQTISAIHMVGIM 68
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARK 235
E L L G VLE+GTGSGY + +VG SGKV TIE IPEL E ++K
Sbjct: 69 CEELD--LDEGQNVLEVGTGSGYHAAVVSKIVGESGKVTTIERIPELFENSKK 119
>sp|A6VI91|PIMT_METM7 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=pcm PE=3 SV=1
Length = 212
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
++ +LI GY+K V++A+ V + +F P + + D P+ +GYG + + ++
Sbjct: 9 VIGNLISNGYIKKQSVIDALMTVPRHKFIPKSMEEYAYIDSPLGIGYGQTISAIHMVGIM 68
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARK 235
E L L G VLE+GTGSGY + +VG SG V TIE IPEL E +++
Sbjct: 69 CEELD--LDVGQNVLEVGTGSGYHAAVVSEIVGESGNVTTIERIPELFEKSKQ 119
>sp|A4G087|PIMT_METM5 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=pcm PE=3 SV=1
Length = 212
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
++ +LI KGY++ V++A+ V + +F P + + D P+ +G G + + ++
Sbjct: 9 VIGNLISKGYIQKQSVIDALMSVPRHKFIPKAMEEYAYIDSPLGIGCGQTISAIHMVGIM 68
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARK 235
E L L G VLE+GTGSGY + +VG SGKV TIE IPEL E +++
Sbjct: 69 CEELD--LDVGQNVLEVGTGSGYHAAVVSEIVGESGKVTTIERIPELFEKSKQ 119
>sp|Q9YDA1|PIMT_AERPE Protein-L-isoaspartate O-methyltransferase OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=pcm PE=3 SV=2
Length = 260
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
MV L G V S RV+EAM V + F P + + D P+ +G+G + P +
Sbjct: 41 MVEQLRRSGLVTSRRVLEAMARVPRHLFVPPEYRGMAYEDRPLPIGHGQTISAPGVVGRM 100
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARK 235
L+LL + G+KVL++G GSGY + L +V G+VY +E IPEL E AR+
Sbjct: 101 LQLLDP--QPGEKVLDVGAGSGYQSALLAELVTPGGRVYAVERIPELAEYARE 151
>sp|B8E0T1|PIMT_DICTD Protein-L-isoaspartate O-methyltransferase OS=Dictyoglomus turgidum
(strain Z-1310 / DSM 6724) GN=pcm PE=3 SV=1
Length = 220
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 76/133 (57%), Gaps = 7/133 (5%)
Query: 107 MAITDYVEPA-AYKTHFMVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPI 165
M+ D+ P YK +V L +G +KS +V++A+ +V + F P + LD + + +
Sbjct: 1 MSFKDFDAPKYKYKRKSLVEILKNEG-IKSQKVLDAILKVPRHIFVPSEYLDLAYENEAL 59
Query: 166 DLGYGTWMEPPYQHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEH 225
+GY + PY L+ E L LK +KVLEIGTGSGY T + + + +VYTIE
Sbjct: 60 PIGYEQTISQPYIVALMTEALD--LKGDEKVLEIGTGSGYQTAILAEL---AKEVYTIER 114
Query: 226 IPELLEAARKRVK 238
I EL E A+KR+K
Sbjct: 115 IRELSEEAKKRIK 127
>sp|Q27869|PIMT_DROME Protein-L-isoaspartate(D-aspartate) O-methyltransferase
OS=Drosophila melanogaster GN=Pcmt PE=1 SV=2
Length = 226
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
++ L G + S V +AM+E D++ ++P +P + D P +G G + P+ H
Sbjct: 13 LIRQLKDHGVIASDAVAQAMKETDRKHYSPRNP----YMDAPQPIGGGVTISAPHMHAFA 68
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISG-----KVYTIEHIPELLEAARKRV 237
LE L HLK G ++L++G+GSGYLT F + G ++ IEH EL+ +R
Sbjct: 69 LEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELV----RRS 124
Query: 238 KAKAET 243
KA T
Sbjct: 125 KANLNT 130
>sp|Q1D6W9|PIMT_MYXXD Protein-L-isoaspartate O-methyltransferase OS=Myxococcus xanthus
(strain DK 1622) GN=pcm PE=3 SV=1
Length = 212
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
Query: 126 DLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLEL 185
D + + +K RV+EA+ +++ +F P D ++ D P+ +G+G + PY L+ E
Sbjct: 8 DYLSRHGIKDARVLEAIARLNRADFVPEDLREEASADSPLPIGHGQTISQPYVVALMTEA 67
Query: 186 LSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARK 235
L L+ ++VLEIGTGSGY T L + +VY++E +PEL ++AR+
Sbjct: 68 L--QLQGDERVLEIGTGSGYQTALLSLLC---REVYSVEIVPELAQSARE 112
>sp|Q12UV0|PIMT_METBU Protein-L-isoaspartate O-methyltransferase OS=Methanococcoides
burtonii (strain DSM 6242) GN=pcm PE=3 SV=1
Length = 203
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 137 RVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGHLKYGDKV 196
RV+ AM++V + F P D + D P+ +GY + P+ ++ +LL + G +
Sbjct: 13 RVLNAMKKVPRHLFLPEDMQSFAYADTPLPIGYDQTISAPHMVAIMCDLLK--ITEGMTI 70
Query: 197 LEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
LEIG+GSGY + + G +GKVYT+E IPEL++ AR ++
Sbjct: 71 LEIGSGSGYNAAVMAELAGENGKVYTVERIPELVDLARNNLE 112
>sp|Q0W2W0|PIMT_UNCMA Protein-L-isoaspartate O-methyltransferase OS=Uncultured
methanogenic archaeon RC-I GN=pcm PE=3 SV=1
Length = 188
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 142 MREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGHLKYGDKVLEIGT 201
M V +EEF P D +YD P+ +G+ + P ++ + L ++ G+KVLEIGT
Sbjct: 1 MDRVPREEFVPEDVRPDAYYDTPLPIGHNQTISAPSMVAIMCQALD--IREGNKVLEIGT 58
Query: 202 GSGYLTTLFGAMVGISGKVYTIEHIPELLEAARK 235
G GY + + G SG VYT+E IPEL + AR
Sbjct: 59 GLGYHAAVMAVLAGASGVVYTVERIPELADMARS 92
>sp|Q8TT94|PIMT2_METAC Protein-L-isoaspartate O-methyltransferase 2 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pcm2 PE=3 SV=1
Length = 238
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query: 133 VKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGHLKY 192
V+ +V++AM V + F P + D P+++G+G + P+ L+ E+L L
Sbjct: 41 VRDKKVLKAMFRVPRHRFVPEYEQRAAYTDRPLEIGHGQTISTPHTVALMCEILE--LSE 98
Query: 193 GDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
G KVLEIGTGSGY + +VG +G +Y++E I L+ ARK ++
Sbjct: 99 GHKVLEIGTGSGYNAAVMAELVGKTGHIYSVERIEPLVNFARKNLE 144
>sp|Q8PW90|PIMT_METMA Protein-L-isoaspartate O-methyltransferase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=pcm PE=3 SV=1
Length = 243
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 130 KGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQ---HCLVLELL 186
+G+V +V++AM V + F P + D P+++G+G + P+ C +LEL
Sbjct: 43 EGFVIDEKVLQAMLRVPRHRFVPEYEQRAAYVDMPLEIGHGQTISAPHMVAMMCEILELA 102
Query: 187 SGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
GH KVLEIG GSGY + +VG +G +YT+E + L A+K +K
Sbjct: 103 EGH-----KVLEIGAGSGYNAAVMSELVGKTGHIYTVERVEPLANFAKKNLK 149
>sp|A6UR90|PIMT_METVS Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pcm
PE=3 SV=1
Length = 209
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
+V +L+ +GY++ VV A+ V + +F P + D P+++GYG + + ++
Sbjct: 9 VVTNLVERGYIRKKSVVSALLSVPRHKFVPKYLESSAYQDNPLEIGYGQTISAIHMVGIM 68
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRV 237
E L L G VLEIGTGSGY + ++G SGK+ TIE + EL +A++ +
Sbjct: 69 CEELD--LDKGQNVLEIGTGSGYHAAVVLEIIGKSGKLTTIERVFELFNSAKENL 121
>sp|O30199|PIMT1_ARCFU Protein-L-isoaspartate O-methyltransferase 1 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=pcm1 PE=3 SV=1
Length = 216
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 135 SVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGHLKYGD 194
S +V A+++V + F P + D P+ +GYG + P+ ++ ELL L+ G+
Sbjct: 21 SEKVYNAIKKVPRHLFVPERYRTMAYVDTPLPIGYGQTISAPHMVAIMCELLD--LREGE 78
Query: 195 KVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 239
+VLEIGTG GY + +VG G V ++E IPEL E A++ + A
Sbjct: 79 RVLEIGTGCGYHAAVTAEIVGKRGLVVSVERIPELAEIAKRNLSA 123
>sp|Q8TT93|PIMT1_METAC Protein-L-isoaspartate O-methyltransferase 1 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pcm1 PE=3 SV=1
Length = 251
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 137 RVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGHLKYGDKV 196
+V++AM V + F P + D P+++G+G + P+ ++ +LL L G KV
Sbjct: 61 KVLKAMLRVPRHLFVPEYAKKGAYIDTPLEIGFGQTISAPHMVAIMCDLLE--LSEGLKV 118
Query: 197 LEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
LEIG GSGY + G +VG SG VYT+E I L++ AR+ +K
Sbjct: 119 LEIGAGSGYNAAVMGELVGKSGHVYTVERIEPLVDFARENLK 160
>sp|A5G6S0|PIMT3_GEOUR Protein-L-isoaspartate O-methyltransferase 3 OS=Geobacter
uraniireducens (strain Rf4) GN=pcm3 PE=3 SV=1
Length = 236
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 109 ITDYVEPAAYKTHFMVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLG 168
++ +P K MV D I +K RV++AM ++ + F + + D P+ +G
Sbjct: 18 LSSATDPYLQKRQEMVRDDIRGRGIKDGRVLDAMAKIPRHLFVGERLRRQAYADTPLPIG 77
Query: 169 YGTWMEPPYQHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPE 228
G + PY L+ E L LK GD+VLEIGTGSGY + MV VY+IE +
Sbjct: 78 EGQTISQPYVVALMTEAL--RLKPGDRVLEIGTGSGYQAAVLAEMV---KDVYSIEIRKD 132
Query: 229 LLEAARKRVK 238
L E A KR+K
Sbjct: 133 LAETADKRLK 142
>sp|B5YF00|PIMT_DICT6 Protein-L-isoaspartate O-methyltransferase OS=Dictyoglomus
thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)
GN=pcm PE=3 SV=1
Length = 220
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 72/121 (59%), Gaps = 6/121 (4%)
Query: 118 YKTHFMVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPY 177
+K +V L +G +KS +V+ A+ ++ + F P + L + + + +GYG + PY
Sbjct: 13 HKRRKLVEILKDEG-IKSQKVLNAILKIPRHMFVPQEYLSLSYENEALPIGYGQTISQPY 71
Query: 178 QHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRV 237
L+ E L +L+ +KVLEIGTGSGY T + + + ++YT+E I ELLE A+KR+
Sbjct: 72 IVALMTEAL--NLQGNEKVLEIGTGSGYQTAILAEL---ALEIYTVERIKELLEEAKKRL 126
Query: 238 K 238
+
Sbjct: 127 R 127
>sp|B1XQE1|PIMT_SYNP2 Protein-L-isoaspartate O-methyltransferase OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=pcm PE=3 SV=1
Length = 222
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 117 AYKTHFMVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPP 176
A + + +I +G V V+ A+++V + F P + + D P+ +GYG + P
Sbjct: 16 ALRQRMVKQQIIARG-VNDPAVLAALQQVPRHRFVPDSLQNLAYADQPLTIGYGQTISQP 74
Query: 177 YQHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKR 236
Y + E + HL KVLEIGTG GY + I+ +V+T+E +PEL AR R
Sbjct: 75 YIVAYMTE--AAHLTPSSKVLEIGTGCGYQAAILAE---IAQEVFTVEVVPELARQARDR 129
Query: 237 VKA 239
++A
Sbjct: 130 LEA 132
>sp|A2BKH8|PIMT_HYPBU Protein-L-isoaspartate O-methyltransferase OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=pcm PE=3 SV=1
Length = 241
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 131 GYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGHL 190
GY++S V AM V +E F P + + D P+ +G+G + P+ ++ E L
Sbjct: 26 GYIRSEHVKRAMLRVPRELFVPDELRHLAYEDTPLPIGHGQTISAPHMVAMMTEYAD--L 83
Query: 191 KYGDKVLEIGTGSGYLTTLFGAMVGIS-------GKVYTIEHIPELLEAARKRVK 238
K G KVLE+G GSGY + +V S G VYTIE IPEL E AR+ ++
Sbjct: 84 KPGMKVLEVGAGSGYHAAVMAEVVAPSDEPREHWGHVYTIERIPELAEFARRNLE 138
>sp|B2A578|PIMT_NATTJ Protein-L-isoaspartate O-methyltransferase OS=Natranaerobius
thermophilus (strain ATCC BAA-1301 / DSM 18059 /
JW/NM-WN-LF) GN=pcm PE=3 SV=1
Length = 210
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 9/113 (7%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
MV + K ++ +V++A R+V +EEF + + D+P+ +G+G + PY ++
Sbjct: 12 MVQKQLAKRDIEDPKVLDAFRKVPREEFITESKQHQAYGDHPLPIGHGQTISQPYIVAMM 71
Query: 183 LELL--SGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAA 233
+ L S H D VLE+GTGSGY T + + + KV+++E IPEL E A
Sbjct: 72 TQALEPSSH----DIVLEVGTGSGYQTAILAEL---TKKVFSLERIPELSEQA 117
>sp|Q2J302|PIMT1_RHOP2 Protein-L-isoaspartate O-methyltransferase 1 OS=Rhodopseudomonas
palustris (strain HaA2) GN=pcm1 PE=3 SV=1
Length = 245
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 105 KYMAITDYVEPAAYKTHFMVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYP 164
++ I+D A + MV I V+ V+ AMR+V +E F P D + D P
Sbjct: 7 RHPPISDDATSFAAQRERMVAQQISARGVRDPLVLAAMRQVPREAFLPERMRDLAYDDSP 66
Query: 165 IDLGYGTWMEPPYQHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIE 224
+ +G+G + PY ++E L L G++VLEIG GSGY + I+G+V TIE
Sbjct: 67 LPIGHGQTISQPYIVAAMIEAL--QLNGGERVLEIGAGSGYAAAVLAQ---IAGEVTTIE 121
Query: 225 HI 226
I
Sbjct: 122 RI 123
>sp|A1ASW6|PIMT2_PELPD Protein-L-isoaspartate O-methyltransferase 2 OS=Pelobacter
propionicus (strain DSM 2379) GN=pcm2 PE=3 SV=1
Length = 225
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 118 YKTHFMVND-LIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPP 176
Y+ M+++ L+G+G ++ V+ AMR+V +E F + + D+P+ + G + P
Sbjct: 17 YRREIMISEQLMGRG-IRDPAVLAAMRQVPREAFVDQGMRELAYEDHPLPIDGGQTISQP 75
Query: 177 YQHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKR 236
Y + E L L D+VLEIGTGSGY + +V VY++E + EL AR+R
Sbjct: 76 YIVAYMTEAL--ELSSSDRVLEIGTGSGYAAAVLSRIV---HTVYSVERLEELARGARQR 130
Query: 237 VKA 239
+++
Sbjct: 131 LES 133
>sp|Q123X2|PIMT2_POLSJ Protein-L-isoaspartate O-methyltransferase 2 OS=Polaromonas sp.
(strain JS666 / ATCC BAA-500) GN=pcm2 PE=3 SV=1
Length = 211
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Query: 137 RVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGHLKYGDKV 196
RV+ M +V + EF P D L + + + P+ +G+G + PY L+ +L ++ G KV
Sbjct: 24 RVMAVMGKVPRHEFVPADQLPRAYQNRPLPIGHGQTISQPYIVALMTDL--ARVEPGHKV 81
Query: 197 LEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
LE+GTGSGY + M ++ VYTIE I L AR+R++
Sbjct: 82 LEVGTGSGYQAAV---MAHLARAVYTIEIIEPLGLQARQRLQ 120
>sp|Q2FRW3|PIMT_METHJ Protein-L-isoaspartate O-methyltransferase OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=pcm PE=3 SV=1
Length = 216
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 133 VKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGHLKY 192
VK+ RV++AMR V + F P + + DYP+ +G + PY ++ ELLS +
Sbjct: 21 VKNPRVLQAMRSVPRHLFVPEPYAREAYQDYPLPIGNDQTISQPYIVAVMTELLSP--EK 78
Query: 193 GDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARK 235
GD +LEIGTGSGY + +V V +IE IP + + A++
Sbjct: 79 GDLILEIGTGSGYQAAI---LVACGASVISIERIPAVADLAKR 118
>sp|A3MY16|PIMT_PYRCJ Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum
calidifontis (strain JCM 11548 / VA1) GN=pcm PE=3 SV=1
Length = 207
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
+V +L+ +G +KS RV AM +V +EEF + + D P+ L G + P+ ++
Sbjct: 5 LVAELVKEGVIKSERVKNAMLKVPREEFVTPEYRMMAYEDRPLPLFAGATISAPHMVAMM 64
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPEL 229
EL+ + G K+LE+GTGSGY + + GKVYT+E + EL
Sbjct: 65 CELIEP--RPGMKILEVGTGSGYHAAVCAEAIERQGKVYTVEIVREL 109
>sp|A7HHV3|PIMT2_ANADF Protein-L-isoaspartate O-methyltransferase 2 OS=Anaeromyxobacter
sp. (strain Fw109-5) GN=pcm2 PE=3 SV=2
Length = 243
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 11/128 (8%)
Query: 108 AITDYVEPAAYKT------HFMVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHY 161
A D P+A ++ MV + + ++ RV+EAM +V +E F P +
Sbjct: 22 ACADRGHPSAERSTPETERRRMVEEQLAARGIRDRRVLEAMGKVPRERFVPEQWRSLAYL 81
Query: 162 DYPIDLGYGTWMEPPYQHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVY 221
D P+ +G G + PY + + L+ L+ G++VLE+G+GSGY + + ++G VY
Sbjct: 82 DEPLPIGRGQTISQPYVVAFMAQALA--LRGGERVLEVGSGSGYAAAV---LAHLAGAVY 136
Query: 222 TIEHIPEL 229
IE PEL
Sbjct: 137 GIELEPEL 144
>sp|A1U4P7|PIMT2_MARAV Protein-L-isoaspartate O-methyltransferase 2 OS=Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=pcm2
PE=3 SV=1
Length = 219
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 6/119 (5%)
Query: 127 LIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELL 186
L+ +G + RV+EAM V +E+F P + + D+P+ +G G + PY L+ E L
Sbjct: 20 LVPRG-ISDGRVLEAMERVPREQFVPEHLRFEAYEDHPVPIGQGQTISQPYIVALMAEAL 78
Query: 187 SGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYI 245
LK ++VL+IGTGSGY + ++ +V++IE IPEL ARK + T +
Sbjct: 79 C--LKGRERVLDIGTGSGYAAA---VLASLALEVFSIERIPELAAQARKNLDRTGFTQV 132
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,281,565
Number of Sequences: 539616
Number of extensions: 4609766
Number of successful extensions: 13129
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 323
Number of HSP's that attempted gapping in prelim test: 12493
Number of HSP's gapped (non-prelim): 665
length of query: 255
length of database: 191,569,459
effective HSP length: 115
effective length of query: 140
effective length of database: 129,513,619
effective search space: 18131906660
effective search space used: 18131906660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)