RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7843
(255 letters)
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 224
Score = 96.5 bits (239), Expect = 6e-25
Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
++++L G +K+ +V E M D+ +A +P + D P +G+ + P+ H
Sbjct: 11 LIHNLRKNGIIKTDKVFEVMLATDRSHYAKCNP----YMDSPQSIGFQATISAPHMHAYA 66
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKR 236
LELL L G K L++G+GSG LT F MVG +GKV I+HI EL++ +
Sbjct: 67 LELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNN 120
>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 223
Score = 85.3 bits (210), Expect = 1e-20
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
++ L G + S V +AM+E D++ ++P +P + D P +G G + P+ H
Sbjct: 15 LIRQLKDHGVIASDAVAQAMKETDRKHYSPRNP----YMDAPQPIGGGVTISAPHMHAFA 70
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISG-----KVYTIEHIPELLEAARKRV 237
LE L HLK G ++L++G+GSGYLT F + G ++ IEH EL+ ++ +
Sbjct: 71 LEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANL 130
Query: 238 KAKAETYIK 246
+ +
Sbjct: 131 NTDDRSMLD 139
>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 215
Score = 67.9 bits (165), Expect = 2e-14
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLV 182
V L +G ++S V A + + H D P+ + G + P+ ++
Sbjct: 11 TVEMLKAEGIIRSKEVERAFLKYPRYLSVEDKYKKYAHIDEPLPIPAGQTVSAPHMVAIM 70
Query: 183 LELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAE 242
LE+ +LK G +LE+GTGSG+ L +V VYTIE IPEL+E A++ ++
Sbjct: 71 LEI--ANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGV 126
Query: 243 TYIKRIN 249
+ I
Sbjct: 127 KNVHVIL 133
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 68.7 bits (167), Expect = 3e-14
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 121 HFMVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHC 180
++GK + +R +++ P DY + + GT + P
Sbjct: 38 AVPFGKIVGKFPGQILRSS------FGKQYMLRRPA---LEDYVVLMKRGTAITFPKDIN 88
Query: 181 LVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 239
++L ++ + GD VLE G+GSG ++ VG G+V + E + + A+K K
Sbjct: 89 MILSMMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKH 145
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 264
Score = 56.9 bits (137), Expect = 3e-10
Identities = 29/130 (22%), Positives = 46/130 (35%), Gaps = 11/130 (8%)
Query: 121 HFMVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHC 180
+ +IG V+ + F + PL DY + + G + P
Sbjct: 36 SIAHDAVIGLEQGSVVKSS------NGALFLVLRPL---LVDYVMSMPRGPQVIYPKDAA 86
Query: 181 LVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAK 240
++ + G +VLE G GSG LT VG +G+V + E + E AR+ V
Sbjct: 87 QIVHEG--DIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGC 144
Query: 241 AETYIKRINF 250
Sbjct: 145 YGQPPDNWRL 154
>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Sulfolobus tokodaii [TaxId: 111955]}
Length = 224
Score = 55.6 bits (133), Expect = 5e-10
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 133 VKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGHLKY 192
+K+ + EA +VD+ F P + D + L + + + L L
Sbjct: 11 IKTQELAEAFNKVDRSLFLPENLKDYAYAHTHEALPILPGINTTALNLGIFMLDELDLHK 70
Query: 193 GDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
G KVLEIGTG GY T L +V KV ++E ++ A K +
Sbjct: 71 GQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLS 113
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga
maritima [TaxId: 2336]}
Length = 266
Score = 50.1 bits (119), Expect = 5e-08
Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 11/119 (9%)
Query: 121 HFMVNDLIGKGYVKSVRVVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHC 180
+N++ KG + +R ++ + P D +++ T + P
Sbjct: 43 IIDLNEVFEKGPGEIIRTS------AGKKGYILIPS---LIDEIMNMKRRTQIVYPKDSS 93
Query: 181 LVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 239
+ +L +K GD++++ G GSG + + VG SGKV+ E E + A +
Sbjct: 94 FIAMML--DVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTK 150
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 250
Score = 48.9 bits (116), Expect = 1e-07
Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 14/76 (18%)
Query: 163 YPIDLGYGTWMEPPYQHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYT 222
ID Y ++ L+ G +LE+G GSG +++ + G +
Sbjct: 70 SEIDASY------------IIMRC--GLRPGMDILEVGVGSGNMSSYILYALNGKGTLTV 115
Query: 223 IEHIPELLEAARKRVK 238
+E + L+ A +
Sbjct: 116 VERDEDNLKKAMDNLS 131
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus
fulgidus [TaxId: 2234]}
Length = 209
Score = 46.2 bits (109), Expect = 9e-07
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 159 GHYDYPIDLGYGTWMEPPYQHCLVLELLSG---HLKYGDKVLEIGTGSGYLTTLFGAMVG 215
HY + GY W P++ L +L G L+ ++VL +G SG T A +
Sbjct: 22 SHYGEKVFDGYREW--VPWRSKLAAMILKGHRLKLRGDERVLYLGAASGT-TVSHLADIV 78
Query: 216 ISGKVYTIEHIPELLEAARKRVK 238
G +Y +E+ + E + V+
Sbjct: 79 DEGIIYAVEYSAKPFEKLLELVR 101
>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl
O-methyltransferase {Thermotoga maritima [TaxId: 2336]}
Length = 213
Score = 40.0 bits (92), Expect = 9e-05
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 123 MVNDLIGKGYVKSVRVVEAMREVDKEEFAPMD-PLDKGHYDYPI----DLGYGTWMEPPY 177
+ L G S + +A E+ +EEF PL + D + D + P
Sbjct: 5 LFWILKKYGV--SDHIAKAFLEIPREEFLTKSYPLSYVYEDIVLVSYDDGEEYSTSSQPS 62
Query: 178 QHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRV 237
L +E + G +VLEIG G+GY + +VG G V ++E+ ++ E A++ V
Sbjct: 63 LMALFMEWVGLD--KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNV 120
Query: 238 KA 239
+
Sbjct: 121 ER 122
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus
horikoshii [TaxId: 53953]}
Length = 227
Score = 39.7 bits (92), Expect = 1e-04
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 189 HLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 239
+K G VL +G SG + +VG GK++ IE P +L V+
Sbjct: 70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE 120
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 406
Score = 39.3 bits (91), Expect = 3e-04
Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 5/85 (5%)
Query: 154 DPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAM 213
HY + YG + V + LK GD +++G+G G
Sbjct: 182 QANKLKHYKAFSNYVYGELLPNFLSD--VYQQC--QLKKGDTFMDLGSGVGNCVVQAALE 237
Query: 214 VGISGKVYTIEHIPELLEAARKRVK 238
G + E + + + + +
Sbjct: 238 CG-CALSFGCEIMDDASDLTILQYE 261
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT)
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 186
Score = 37.9 bits (87), Expect = 4e-04
Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 181 LVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKA 239
L++ L D +++G G+G +T + G +VY I+ PE + ++
Sbjct: 24 LIMCLAE--PGKNDVAVDVGCGTGGVTL---ELAGRVRRVYAIDRNPEAISTTEMNLQR 77
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus
jannaschii [TaxId: 2190]}
Length = 230
Score = 37.8 bits (87), Expect = 6e-04
Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 189 HLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
+K K+L +G +G + A + G VY IE+ P ++
Sbjct: 71 PIKRDSKILYLGASAGTTPSHV-ADIADKGIVYAIEYAPRIMRELLDACA 119
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase,
INMT {Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 36.6 bits (83), Expect = 0.002
Identities = 19/102 (18%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Query: 143 REVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGHLKYGDKVLEIGTG 202
+ ++ F P D L +Y + M CL + GD +++IG+G
Sbjct: 4 GDEYQKHFLPRDYLAT-YYSFDGSPSPEAEMLKFNLECL-HKTFGPGGLQGDTLIDIGSG 61
Query: 203 SGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETY 244
L A + + E K +K + Y
Sbjct: 62 PTIYQVL--AACDSFQDITLSDFTDRNREELEKWLKKEPGAY 101
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase
3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 35.6 bits (81), Expect = 0.003
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 189 HLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRI 248
H+ VL++G G+G L ++F A G + KV ++ L +A K E I I
Sbjct: 32 HIFKDKVVLDVGCGTGIL-SMFAAKAG-AKKVLGVDQSEILYQAMDIIRLNKLEDTITLI 89
Query: 249 N 249
Sbjct: 90 K 90
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 278
Score = 34.9 bits (79), Expect = 0.007
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 190 LKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRIN 249
L+ D VLE+G G+G +T ++ + KV E P L+ KRV+ ++
Sbjct: 19 LRPTDVVLEVGPGTGNMTV---KLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVL 75
Query: 250 FYEI 253
++
Sbjct: 76 VGDV 79
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase
{Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Length = 252
Score = 34.5 bits (78), Expect = 0.008
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 185 LLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKR 236
L+ + K GD VL++G G G + G+ Y ++ + AR R
Sbjct: 17 LIRLYTKRGDSVLDLGCGKGGDLLKYERAGI--GEYYGVDIAEVSINDARVR 66
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Human (Homo sapiens) [TaxId:
9606]}
Length = 328
Score = 34.4 bits (78), Expect = 0.010
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 7/86 (8%)
Query: 154 DPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLS-GHLKYGDKVLEIGTGSGYLTTLFGA 212
DP +Y+ YG LV +++ + D +++G+G G + L A
Sbjct: 117 DPEKLNNYEPFSPEVYG-----ETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQV-VLQVA 170
Query: 213 MVGISGKVYTIEHIPELLEAARKRVK 238
Y +E + A +
Sbjct: 171 AATNCKHHYGVEKADIPAKYAETMDR 196
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus
halodurans [TaxId: 86665]}
Length = 231
Score = 33.8 bits (76), Expect = 0.013
Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 182 VLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELL 230
++++ + LK ++VL++ TG G++ F V KV + ++L
Sbjct: 7 LMQIAA--LKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDIL 50
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli
[TaxId: 562]}
Length = 245
Score = 33.8 bits (76), Expect = 0.015
Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 181 LVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISG 218
+ +L +K G ++L++G+GSG + + GI+G
Sbjct: 24 TLGRVL--RMKPGTRILDLGSGSGEMLCTWARDHGITG 59
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis
[TaxId: 1423]}
Length = 234
Score = 33.4 bits (75), Expect = 0.019
Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 181 LVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPE 228
L+++ + +VL+IG G+G+ F V + ++ E
Sbjct: 7 LMIKTA--ECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKE 49
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus
cereus [TaxId: 1396]}
Length = 281
Score = 32.5 bits (73), Expect = 0.032
Identities = 7/37 (18%), Positives = 15/37 (40%)
Query: 189 HLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEH 225
+ +++ G G GYL + ++ K I+
Sbjct: 24 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDS 60
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis,
Ermc' [TaxId: 1423]}
Length = 235
Score = 32.1 bits (72), Expect = 0.047
Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Query: 189 HLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRI 248
L D + EIG+G G+ T +V V IE +L + ++ +
Sbjct: 18 RLNEHDNIFEIGSGKGHFTL---ELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNK 74
Query: 249 NFYEI 253
+ +
Sbjct: 75 DILQF 79
>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine
N-methyltransferase, PNMTase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 263
Score = 31.7 bits (71), Expect = 0.071
Identities = 5/61 (8%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Query: 184 ELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAET 243
+ + G +++IG+G L + + + + + + ++ +
Sbjct: 46 QTFATGEVSGRTLIDIGSGPTVYQLL--SACSHFEDITMTDFLEVNRQELGRWLQEEPGA 103
Query: 244 Y 244
+
Sbjct: 104 F 104
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus
pneumoniae, Ermam [TaxId: 1313]}
Length = 245
Score = 30.6 bits (68), Expect = 0.13
Identities = 12/18 (66%), Positives = 13/18 (72%)
Query: 190 LKYGDKVLEIGTGSGYLT 207
LK D V EIGTG G+LT
Sbjct: 27 LKETDTVYEIGTGKGHLT 44
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein
KsgA {Escherichia coli [TaxId: 562]}
Length = 252
Score = 30.6 bits (68), Expect = 0.14
Identities = 11/67 (16%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Query: 187 SGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYIK 246
+ + + G ++EIG G LT + ++ IE +L + + I
Sbjct: 16 AINPQKGQAMVEIGPGLAALTE---PVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIY 72
Query: 247 RINFYEI 253
+ +
Sbjct: 73 QQDAMTF 79
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 322
Score = 30.0 bits (67), Expect = 0.23
Identities = 8/53 (15%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Query: 193 GDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAETYI 245
KVL++ G G + +F + +E L + + + +
Sbjct: 44 ELKVLDLYPGVGIQSAIFYNKYCPR-QYSLLEKRSSLYKFLNAKFEGSPLQIL 95
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 246
Score = 29.6 bits (65), Expect = 0.27
Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 8/53 (15%)
Query: 160 HYD--YPIDLGYGTWMEPPYQHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLF 210
YD D+ Y W + ++E + D L++ G+G LT
Sbjct: 9 IYDKLIRADVDYKKWSD------FIIEKCVENNLVFDDYLDLACGTGNLTENL 55
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 280
Score = 29.6 bits (65), Expect = 0.33
Identities = 14/99 (14%), Positives = 32/99 (32%), Gaps = 15/99 (15%)
Query: 168 GYGTWMEPPYQHCLVLELLS----------GHLKYGDKVLEIGTGSGYLTTLF-----GA 212
+ ++ +H + E + G K K+L IG G+G +
Sbjct: 6 SFRRFLNHSTEHQCMQEFMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQ 65
Query: 213 MVGISGKVYTIEHIPELLEAARKRVKAKAETYIKRINFY 251
G+ +E E + ++ V + + ++
Sbjct: 66 YPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWH 104
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas
syringae [TaxId: 317]}
Length = 201
Score = 29.3 bits (64), Expect = 0.34
Identities = 7/50 (14%), Positives = 12/50 (24%), Gaps = 3/50 (6%)
Query: 189 HLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
++ G +VL G + V E +E
Sbjct: 17 NVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERG 63
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO)
{Haemophilus influenzae [TaxId: 727]}
Length = 225
Score = 29.3 bits (64), Expect = 0.41
Identities = 12/80 (15%), Positives = 24/80 (30%), Gaps = 3/80 (3%)
Query: 175 PPYQHC--LVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYT-IEHIPELLE 231
P Y + + L + V ++G G T + I++ ++E
Sbjct: 20 PGYSNIITAIGMLAERFVTADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVE 79
Query: 232 AARKRVKAKAETYIKRINFY 251
R+ + A I
Sbjct: 80 RCRQHIAAYHSEIPVEILCN 99
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 316
Score = 29.4 bits (65), Expect = 0.42
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 189 HLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIP 227
HL VL++G+G+G L +F A G + KV IE
Sbjct: 30 HLFKDKVVLDVGSGTGIL-CMFAAKAG-ARKVIGIECSS 66
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 229
Score = 28.9 bits (63), Expect = 0.55
Identities = 9/46 (19%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Query: 193 GDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
G +VLE+G G + + + IE + + R
Sbjct: 54 GGRVLEVGFGMAIAASKV--QEAPIDEHWIIECNDGVFQRLRDWAP 97
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 328
Score = 28.7 bits (63), Expect = 0.65
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 189 HLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAK 240
L VL++G G+G L ++F A G + V ++ + ++E A++ V+
Sbjct: 35 DLFKDKIVLDVGCGTGIL-SMFAAKHG-AKHVIGVD-MSSIIEMAKELVELN 83
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol
dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 171
Score = 27.5 bits (60), Expect = 1.0
Identities = 13/51 (25%), Positives = 20/51 (39%)
Query: 185 LLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARK 235
G + G KVL G G + TL A + +V + L A++
Sbjct: 19 CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE 69
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia
carotovora [TaxId: 554]}
Length = 225
Score = 27.6 bits (60), Expect = 1.3
Identities = 6/32 (18%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 179 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLF 210
H ++ + + +LE+G+ G T+
Sbjct: 8 HPFMVRAFTPFFR-PGNLLELGSFKGDFTSRL 38
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 208
Score = 27.1 bits (59), Expect = 1.6
Identities = 9/72 (12%), Positives = 18/72 (25%)
Query: 184 ELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAKAET 243
L+ L + + A I + + AR+ +
Sbjct: 66 FGLNKDLGFSEADRNENIRRIAEVAKLFADSNSIAITSFISPYRKDRDTARQLHEVATPG 125
Query: 244 YIKRINFYEIIV 255
+ F E+ V
Sbjct: 126 EETGLPFVEVYV 137
>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 214
Score = 27.1 bits (59), Expect = 1.6
Identities = 9/44 (20%), Positives = 19/44 (43%)
Query: 195 KVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
VLE+G GY ++ ++ T+E P+ ++ +
Sbjct: 59 LVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLN 102
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH)
{Escherichia coli [TaxId: 562]}
Length = 143
Score = 26.7 bits (58), Expect = 1.7
Identities = 8/28 (28%), Positives = 11/28 (39%)
Query: 178 QHCLVLELLSGHLKYGDKVLEIGTGSGY 205
L + G +K G VL G G+
Sbjct: 107 PCALDEAVRDGRIKPGQLVLLEAFGGGF 134
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia
coli [TaxId: 562]}
Length = 268
Score = 27.2 bits (59), Expect = 2.1
Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 14/70 (20%)
Query: 156 LDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVG 215
LD GHY P + +V +L VL+IG G GY T A
Sbjct: 61 LDAGHYQ-------------PLRDAIVAQLRERLDDKATAVLDIGCGEGY-YTHAFADAL 106
Query: 216 ISGKVYTIEH 225
+ ++
Sbjct: 107 PEITTFGLDV 116
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 197
Score = 26.6 bits (58), Expect = 2.3
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 193 GDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVK 238
G V++ GTG+G L G+ + + V + P+ +E A++
Sbjct: 49 GRSVIDAGTGNGILA--CGSYLLGAESVTAFDIDPDAIETAKRNCG 92
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 292
Score = 26.8 bits (58), Expect = 2.6
Identities = 8/48 (16%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Query: 193 GDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLEAARKRVKAK 240
+VL++ G+G + + V +++ ++L+ A K +
Sbjct: 57 CHRVLDVACGTGVDSIMLVEEG---FSVTSVDASDKMLKYALKERWNR 101
>d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA
synthase MvaS {Staphylococcus aureus [TaxId: 1280]}
Length = 221
Score = 26.8 bits (59), Expect = 2.6
Identities = 14/86 (16%), Positives = 27/86 (31%), Gaps = 6/86 (6%)
Query: 169 YGTWMEPPYQHCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMV--GISGKVYTIEHI 226
G L+ L + L+ G+ + GSG + + A + G + H
Sbjct: 106 VGNIYTGSLYLSLISLLENRDLQAGETIGLFSYGSGSVGEFYSATLVEGYKDHLDQAAHK 165
Query: 227 PELLEAARKRVKAKAETYIKRINFYE 252
L R + + Y ++
Sbjct: 166 ALL----NNRTEVSVDAYETFFKRFD 187
>d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa
(Medicago sativa) [TaxId: 3879]}
Length = 244
Score = 26.6 bits (58), Expect = 2.7
Identities = 13/107 (12%), Positives = 28/107 (26%), Gaps = 11/107 (10%)
Query: 138 VVEAMREVDKEEFAPMDPLDKGHYDYPIDLGYGTWMEPPYQHCLVLELLSGHLKYGDKVL 197
V+E + E D + L + L L KV+
Sbjct: 116 VIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVI 175
Query: 198 EI---------GTGSGYLTTLFGA--MVGISGKVYTIEHIPELLEAA 233
+ + L + + + G+ T + +L + +
Sbjct: 176 IVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLS 222
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the
r1128 polyketide biosynthetic pathway {Streptomyces sp.
r1128 [TaxId: 140437]}
Length = 153
Score = 26.2 bits (57), Expect = 2.9
Identities = 9/36 (25%), Positives = 13/36 (36%), Gaps = 3/36 (8%)
Query: 179 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMV 214
L + SG + G L IG G+G +
Sbjct: 113 LALDRLVRSGAVPGGGPALMIGFGAGL---SYAGQA 145
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH)
{Thermus thermophilus [TaxId: 274]}
Length = 149
Score = 26.3 bits (57), Expect = 2.9
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 178 QHCLVLELLSGHLKYGDKVLEIGTGSGY 205
L + +G ++ GD VL + G+G
Sbjct: 110 PLALKEAVDAGRIREGDHVLLVSFGAGL 137
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH)
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 148
Score = 25.8 bits (56), Expect = 3.5
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 179 HCLVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMV 214
+ L +G K GD L IG G+G + A V
Sbjct: 113 LAMAELLTTGAAKPGDLALLIGYGAGL---SYAAQV 145
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain
{Thermus aquaticus [TaxId: 271]}
Length = 223
Score = 25.8 bits (55), Expect = 4.8
Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Query: 181 LVLELLSGHLKYGDKVLEIGTGSGYLTTLFGAMVGISGKVYTIEHIPELLE 231
++ L G +VLE G F G + + +E P+ L+
Sbjct: 10 FMVSLA--EAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALD 58
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389
{Thermotoga maritima [TaxId: 2336]}
Length = 246
Score = 25.9 bits (55), Expect = 4.9
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 169 YGTWMEPP---YQHCLVLELLSGHLKYGDKVLEIGTGSGYL 206
Y + E P H L+ L +LK +VL++G G+G
Sbjct: 16 YDSMYETPKWKLYHRLIGSFLEEYLKNPCRVLDLGGGTGKW 56
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.138 0.417
Gapped
Lambda K H
0.267 0.0653 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,028,937
Number of extensions: 49387
Number of successful extensions: 189
Number of sequences better than 10.0: 1
Number of HSP's gapped: 186
Number of HSP's successfully gapped: 66
Length of query: 255
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 172
Effective length of database: 1,268,006
Effective search space: 218097032
Effective search space used: 218097032
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.0 bits)