Query psy7846
Match_columns 281
No_of_seqs 265 out of 1785
Neff 6.6
Searched_HMMs 13730
Date Fri Aug 16 20:19:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7846.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7846hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2f69a1 b.76.2.1 (A:116-193) H 36.9 37 0.0027 22.7 5.4 40 18-57 8-49 (78)
2 d2f69a1 b.76.2.1 (A:116-193) H 30.2 28 0.002 23.3 3.9 13 38-50 4-16 (78)
3 d2hj1a1 d.15.3.4 (A:11-87) Hyp 12.6 31 0.0022 23.1 0.9 19 252-270 58-76 (77)
4 d2qqra2 b.34.9.1 (A:956-1011) 9.5 2.1E+02 0.015 17.6 4.8 10 41-50 11-20 (56)
5 d1wxqa2 d.15.10.2 (A:320-395) 7.3 67 0.0049 21.1 1.0 17 252-268 59-75 (76)
6 d2vbua1 b.43.5.2 (A:2-132) CTP 6.0 75 0.0055 23.2 0.8 28 251-278 92-119 (131)
7 d1tygb_ d.15.3.2 (B:) Thiamin 5.9 79 0.0058 19.7 0.8 13 256-268 49-61 (65)
8 d3ctaa2 b.43.5.2 (A:90-220) CT 5.7 1.2E+02 0.0088 22.0 1.8 48 230-278 72-119 (131)
9 d1a9xb1 c.8.3.1 (B:1502-1652) 5.4 5E+02 0.036 18.7 5.4 29 71-99 5-33 (151)
10 d2ff4a3 b.26.1.2 (A:284-382) P 5.4 95 0.0069 20.8 0.9 25 234-266 64-88 (99)
No 1
>d2f69a1 b.76.2.1 (A:116-193) Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.93 E-value=37 Score=22.69 Aligned_cols=40 Identities=13% Similarity=0.024 Sum_probs=28.9
Q ss_pred cCCCcEEEEEeecCCeeeeeEE-EEecCCC-EEEEEEecCeE
Q psy7846 18 ENPLGQYEGGRNARQQRHGTGR-ALHANGD-YYEGCYSKNLR 57 (281)
Q Consensus 18 ~~~g~~Y~G~~~~~g~~~G~G~-~~~~dG~-~YeG~~~~gk~ 57 (281)
.|+|+.-.|+.|.++.+.|.=+ ++|||+. .+-|.|.++.+
T Consensus 8 ~pdGGslvG~vne~gEmtGd~IAYvYPD~~talyGsF~dgem 49 (78)
T d2f69a1 8 YPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEM 49 (78)
T ss_dssp CTTSCEEEECCCTTSCCCEEEEEEECTTSSEEEEEEEETTEE
T ss_pred eCCCCEEEeeecCCCccccceEEEEcCCCeEEEEEEeeccce
Confidence 4677888888888888888764 4578875 47777776654
No 2
>d2f69a1 b.76.2.1 (A:116-193) Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.19 E-value=28 Score=23.32 Aligned_cols=13 Identities=15% Similarity=0.141 Sum_probs=5.2
Q ss_pred EEEEecCCCEEEE
Q psy7846 38 GRALHANGDYYEG 50 (281)
Q Consensus 38 G~~~~~dG~~YeG 50 (281)
.-+.+|||-.-.|
T Consensus 4 Cw~y~pdGGslvG 16 (78)
T d2f69a1 4 CWIYYPDGGSLVG 16 (78)
T ss_dssp EEEECTTSCEEEE
T ss_pred eEEEeCCCCEEEe
Confidence 3334444443333
No 3
>d2hj1a1 d.15.3.4 (A:11-87) Hypothetical protein HI0395 {Haemophilus influenzae [TaxId: 727]}
Probab=12.60 E-value=31 Score=23.08 Aligned_cols=19 Identities=26% Similarity=0.405 Sum_probs=14.4
Q ss_pred eeccceEEecceEEEecCC
Q psy7846 252 VSSAGELHIGDQIEVMSSP 270 (281)
Q Consensus 252 ~~~~g~~~~~~~~~~~~~~ 270 (281)
+..+..|..||+|||-++.
T Consensus 58 v~~~~~L~~gDRVEIYRPL 76 (77)
T d2hj1a1 58 IKLTDVLKEGDRIEIYRPL 76 (77)
T ss_dssp CCTTCBCCTTCEEEECCCC
T ss_pred cCCCCcCCCCCEEEEeecC
Confidence 3445678999999997763
No 4
>d2qqra2 b.34.9.1 (A:956-1011) Jumonji domain-containing protein 2A {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.52 E-value=2.1e+02 Score=17.62 Aligned_cols=10 Identities=20% Similarity=0.458 Sum_probs=4.4
Q ss_pred EecCCCEEEE
Q psy7846 41 LHANGDYYEG 50 (281)
Q Consensus 41 ~~~dG~~YeG 50 (281)
.|+||.+|..
T Consensus 11 rW~DG~~y~A 20 (56)
T d2qqra2 11 RWTDGQVYGA 20 (56)
T ss_dssp ECTTSCEEEE
T ss_pred EcCCCCEEEE
Confidence 3444444444
No 5
>d1wxqa2 d.15.10.2 (A:320-395) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=7.34 E-value=67 Score=21.12 Aligned_cols=17 Identities=29% Similarity=0.470 Sum_probs=12.4
Q ss_pred eeccceEEecceEEEec
Q psy7846 252 VSSAGELHIGDQIEVMS 268 (281)
Q Consensus 252 ~~~~g~~~~~~~~~~~~ 268 (281)
+...-+|..||+|||++
T Consensus 59 v~l~~~L~dgDvVeIiT 75 (76)
T d1wxqa2 59 VGEDYELQFNDIVKIVS 75 (76)
T ss_dssp CCTTCCCCTTEEEEEEE
T ss_pred CCCCcCccCCCEEEEEE
Confidence 34455678889999975
No 6
>d2vbua1 b.43.5.2 (A:2-132) CTP-dependent riboflavin kinase, Rfk {Methanococcus jannaschii [TaxId: 2190]}
Probab=6.04 E-value=75 Score=23.19 Aligned_cols=28 Identities=21% Similarity=0.402 Sum_probs=21.4
Q ss_pred eeeccceEEecceEEEecCCCccccCCC
Q psy7846 251 LVSSAGELHIGDQIEVMSSPSMHENMNA 278 (281)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 278 (281)
.+...=.-|..++|||||+.-.|+..+.
T Consensus 92 ii~P~rT~h~~~vvEiIap~~LRe~L~L 119 (131)
T d2vbua1 92 IVVPKKTYHSSEIIEIIAPMKLREQFNL 119 (131)
T ss_dssp EEEESCCSSCEEEEEEECSSCHHHHTTC
T ss_pred EEEeCCCCCCCCEEEEECCcchhhhCCC
Confidence 4444556677899999999999987765
No 7
>d1tygb_ d.15.3.2 (B:) Thiamin biosynthesis sulfur carrier protein ThiS {Bacillus subtilis [TaxId: 1423]}
Probab=5.91 E-value=79 Score=19.71 Aligned_cols=13 Identities=38% Similarity=0.348 Sum_probs=10.4
Q ss_pred ceEEecceEEEec
Q psy7846 256 GELHIGDQIEVMS 268 (281)
Q Consensus 256 g~~~~~~~~~~~~ 268 (281)
-.|..+|+|||++
T Consensus 49 ~~L~~gD~IEIv~ 61 (65)
T d1tygb_ 49 VELCDRDVIEIVH 61 (65)
T ss_dssp SBCCSSSEEEEEE
T ss_pred ccCCCCCEEEEEE
Confidence 3577889999986
No 8
>d3ctaa2 b.43.5.2 (A:90-220) CTP-dependent riboflavin kinase, Rfk {Thermoplasma acidophilum [TaxId: 2303]}
Probab=5.75 E-value=1.2e+02 Score=22.01 Aligned_cols=48 Identities=13% Similarity=0.048 Sum_probs=21.7
Q ss_pred CCCeEEeeEcCCeEeeccccceeeccceEEecceEEEecCCCccccCCC
Q psy7846 230 NSEQEEGAWSEGREELGEEEDLVSSAGELHIGDQIEVMSSPSMHENMNA 278 (281)
Q Consensus 230 ~G~~~~G~W~~G~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 278 (281)
++..+=+.+---.+++..+...+...=.-| .|+|||||+.-.|+..+.
T Consensus 72 ~~rtfG~v~~~~~~i~~i~~aiv~P~rT~h-~dvvEiIap~~LRe~L~L 119 (131)
T d3ctaa2 72 EDRTFGSVKAFPAKIQNIPCFVIMPERTVY-TDVIEIISDKYLREEINL 119 (131)
T ss_dssp --CEECCEEEEEEEETTEEEEEEEESSCCC-CSEEEEECC---------
T ss_pred CCceEeeEEEEEEEECCEeEEEEEccCCCC-CCEEEEECChhhHhhcCC
Confidence 334443333333344444445555555667 489999999999987664
No 9
>d1a9xb1 c.8.3.1 (B:1502-1652) Carbamoyl phosphate synthetase, small subunit N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=5.36 E-value=5e+02 Score=18.69 Aligned_cols=29 Identities=14% Similarity=0.354 Sum_probs=13.8
Q ss_pred EEEEecCCEEEEEEeCCeEeeeEEEEEcC
Q psy7846 71 IYYYINGDTYSGAWFKGKRHGIGTYTYAT 99 (281)
Q Consensus 71 ~~~~~nG~~Y~G~w~~g~~~G~G~~~~~n 99 (281)
.+...||.+|+|...--...-.|..+|..
T Consensus 5 ~L~LedG~~f~G~~~g~~~~~~GE~vFnT 33 (151)
T d1a9xb1 5 LLVLEDGTQFHGRAIGATGSAVGEVVFNT 33 (151)
T ss_dssp EEEETTSCEEEEEECSCSEEEEEEEEEEC
T ss_pred EEEeCCCCEEEEEecCCCcceeEEEEEEe
Confidence 34445555555544444444444444443
No 10
>d2ff4a3 b.26.1.2 (A:284-382) Probable regulatory protein EmbR, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=5.35 E-value=95 Score=20.83 Aligned_cols=25 Identities=24% Similarity=0.308 Sum_probs=15.5
Q ss_pred EEeeEcCCeEeeccccceeeccceEEecceEEE
Q psy7846 234 EEGAWSEGREELGEEEDLVSSAGELHIGDQIEV 266 (281)
Q Consensus 234 ~~G~W~~G~~~~~~~~~~~~~~g~~~~~~~~~~ 266 (281)
.-|.|-||+++.. .-.|..||+|+|
T Consensus 64 ~nGt~vNg~~i~~--------~~~L~~Gd~i~i 88 (99)
T d2ff4a3 64 SNGVHVQHERIRS--------AVTLNDGDHIRI 88 (99)
T ss_dssp SSCCEETTEECSS--------EEEECTTCEEEE
T ss_pred cCCCeECCEEcCC--------ceECCCCCEEEE
Confidence 3478889988731 124566666654
Done!