RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7846
         (281 letters)



>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato
           (Lycopersicon esculentum), P14a [TaxId: 4081]}
          Length = 135

 Score = 25.2 bits (54), Expect = 5.5
 Identities = 8/39 (20%), Positives = 15/39 (38%)

Query: 42  HANGDYYEGCYSKNLRYGEWKKNTQHGCGIYYYINGDTY 80
           +A      G   ++     W+ + + GCG     NG  +
Sbjct: 80  YATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWF 118


>d1erna1 b.1.2.1 (A:10-116) Erythropoietin (EPO) receptor {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 107

 Score = 24.4 bits (53), Expect = 8.3
 Identities = 6/18 (33%), Positives = 7/18 (38%)

Query: 104 LTCAWDADEITGGGRLEY 121
           L C W+     G G   Y
Sbjct: 27  LVCFWEEAASAGVGPGNY 44


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.311    0.134    0.409 

Gapped
Lambda     K      H
   0.267   0.0572    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,148,523
Number of extensions: 55643
Number of successful extensions: 68
Number of sequences better than 10.0: 1
Number of HSP's gapped: 68
Number of HSP's successfully gapped: 5
Length of query: 281
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 197
Effective length of database: 1,254,276
Effective search space: 247092372
Effective search space used: 247092372
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 52 (24.2 bits)