Query psy7848
Match_columns 754
No_of_seqs 439 out of 2209
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 20:23:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7848.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7848hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 3.7E-46 1.3E-50 394.6 30.8 269 469-750 3-273 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 9.4E-46 3.2E-50 395.2 20.9 269 469-751 4-277 (296)
3 1zbd_B Rabphilin-3A; G protein 100.0 1.8E-37 6E-42 292.2 10.6 129 81-251 3-131 (134)
4 2zet_C Melanophilin; complex, 100.0 2.6E-37 9.1E-42 297.0 7.2 132 83-228 12-147 (153)
5 3n5a_A Synaptotagmin-7; calciu 99.9 6.5E-28 2.2E-32 227.2 13.0 136 614-749 2-138 (138)
6 1w15_A Synaptotagmin IV; metal 99.9 4.2E-27 1.5E-31 226.5 13.3 139 611-749 13-152 (153)
7 1tjx_A Similar to synaptotagmi 99.9 6.3E-27 2.1E-31 226.9 14.4 140 611-750 8-148 (159)
8 2cm5_A Rabphilin-3A; protein t 99.9 1.4E-26 4.7E-31 226.2 14.6 141 611-751 20-161 (166)
9 2z0u_A WW domain-containing pr 99.9 1.8E-23 6.3E-28 202.7 7.0 128 611-749 26-155 (155)
10 3fdw_A Synaptotagmin-like prot 99.9 1.9E-22 6.5E-27 193.0 9.5 130 611-752 6-137 (148)
11 3fbk_A RGS3, RGP3, regulator o 99.9 4.5E-22 1.6E-26 191.7 12.1 128 611-751 10-139 (153)
12 1rsy_A Synaptotagmin I; calciu 99.9 1.1E-21 3.6E-26 188.8 12.7 127 611-750 25-151 (152)
13 1wfm_A Synaptotagmin XIII; C2 99.9 1.4E-21 4.9E-26 185.1 13.4 125 611-750 9-133 (138)
14 3f04_A Synaptotagmin-1; C2A, c 99.9 9.3E-22 3.2E-26 186.8 11.9 127 611-750 17-143 (143)
15 2dmg_A KIAA1228 protein; beta- 99.9 5.4E-22 1.8E-26 188.3 9.8 125 611-736 7-136 (142)
16 1ugk_A Synaptotagmin IV, KIAA1 99.9 3.3E-21 1.1E-25 182.1 14.9 131 611-753 5-137 (138)
17 2bwq_A Regulating synaptic mem 99.9 1.9E-21 6.5E-26 181.1 12.2 123 613-748 3-129 (129)
18 1v27_A Regulating synaptic mem 99.9 2.2E-21 7.5E-26 183.3 12.2 129 611-752 4-136 (141)
19 2d8k_A Synaptotagmin VII; exoc 99.9 3.6E-21 1.2E-25 182.5 13.6 129 611-752 9-138 (141)
20 2chd_A Rabphilin-3A, exophilin 99.8 7.1E-21 2.4E-25 180.5 14.0 128 468-595 12-140 (142)
21 2z0u_A WW domain-containing pr 99.8 3.2E-21 1.1E-25 186.9 11.6 124 469-593 27-153 (155)
22 2enp_A B/K protein; C2 type 1, 99.8 4.4E-21 1.5E-25 183.2 12.1 129 611-752 9-144 (147)
23 2bwq_A Regulating synaptic mem 99.8 1.6E-20 5.4E-25 174.9 15.0 123 470-593 3-128 (129)
24 2b3r_A Phosphatidylinositol-4- 99.8 8.2E-21 2.8E-25 179.1 12.3 126 614-752 6-133 (134)
25 2d8k_A Synaptotagmin VII; exoc 99.8 2.1E-20 7.3E-25 177.1 14.8 124 469-594 10-134 (141)
26 1rh8_A Piccolo protein; beta-s 99.8 2.1E-21 7.2E-26 184.0 7.3 127 612-752 4-141 (142)
27 2chd_A Rabphilin-3A, exophilin 99.8 1.1E-20 3.8E-25 179.2 12.2 113 611-723 12-126 (142)
28 1ugk_A Synaptotagmin IV, KIAA1 99.8 4.5E-20 1.5E-24 174.3 16.0 124 469-594 6-132 (138)
29 3rdl_A Protein kinase C alpha 99.8 2E-20 6.7E-25 175.9 13.3 123 612-750 2-125 (137)
30 2dmg_A KIAA1228 protein; beta- 99.8 3.6E-20 1.2E-24 175.7 14.5 125 469-601 8-135 (142)
31 3fdw_A Synaptotagmin-like prot 99.8 1.5E-20 5.3E-25 179.7 11.9 125 469-594 7-133 (148)
32 1v27_A Regulating synaptic mem 99.8 2.7E-20 9.4E-25 175.7 12.7 126 468-594 4-132 (141)
33 1rsy_A Synaptotagmin I; calciu 99.8 6.3E-20 2.1E-24 176.4 15.2 123 469-594 26-149 (152)
34 3f04_A Synaptotagmin-1; C2A, c 99.8 4.6E-20 1.6E-24 175.1 14.1 123 469-594 18-141 (143)
35 1wfm_A Synaptotagmin XIII; C2 99.8 1.9E-19 6.4E-24 170.5 16.2 121 469-594 10-131 (138)
36 1a25_A CALB, protein kinase C 99.8 8E-20 2.7E-24 174.9 13.6 124 611-750 16-140 (149)
37 2enp_A B/K protein; C2 type 1, 99.8 1.2E-19 4E-24 173.2 14.3 123 469-594 10-140 (147)
38 3n5a_A Synaptotagmin-7; calciu 99.8 3.5E-20 1.2E-24 174.2 9.2 111 471-582 2-113 (138)
39 2q3x_A Regulating synaptic mem 99.8 6.1E-20 2.1E-24 180.4 10.8 108 611-723 15-125 (171)
40 1rh8_A Piccolo protein; beta-s 99.8 5.1E-20 1.8E-24 174.4 9.1 124 469-594 4-137 (142)
41 2b3r_A Phosphatidylinositol-4- 99.8 2.8E-19 9.7E-24 168.5 13.6 123 471-594 6-129 (134)
42 1tjx_A Similar to synaptotagmi 99.8 7.8E-19 2.7E-23 169.9 16.4 112 469-581 9-121 (159)
43 2cm5_A Rabphilin-3A; protein t 99.8 1.6E-18 5.4E-23 169.0 17.4 114 468-582 20-134 (166)
44 3fbk_A RGS3, RGP3, regulator o 99.8 3.7E-19 1.3E-23 171.3 12.4 125 467-594 9-136 (153)
45 1w15_A Synaptotagmin IV; metal 99.8 2.2E-19 7.6E-24 172.5 10.8 111 469-580 14-125 (153)
46 3rdl_A Protein kinase C alpha 99.8 8.5E-19 2.9E-23 164.7 13.4 121 469-594 2-123 (137)
47 2r83_A Synaptotagmin-1; C2A-C2 99.8 8.5E-19 2.9E-23 184.9 14.4 123 612-735 3-127 (284)
48 1a25_A CALB, protein kinase C 99.8 2E-18 6.8E-23 165.2 14.7 120 469-593 17-137 (149)
49 2q3x_A Regulating synaptic mem 99.8 2.2E-18 7.4E-23 169.3 13.9 120 469-594 16-138 (171)
50 1dqv_A Synaptotagmin III; beta 99.7 1.8E-18 6.2E-23 184.2 10.6 124 611-735 3-130 (296)
51 2dmh_A Myoferlin; beta-sandwic 99.7 1.4E-17 4.8E-22 157.2 14.5 128 483-626 5-134 (140)
52 2ep6_A MCTP2 protein; beta san 99.7 1.8E-18 6.3E-23 162.1 6.9 109 620-735 5-113 (133)
53 3b7y_A E3 ubiquitin-protein li 99.7 2.8E-17 9.7E-22 157.6 14.3 134 482-625 17-153 (153)
54 2dmh_A Myoferlin; beta-sandwic 99.7 9.2E-18 3.1E-22 158.5 10.7 112 627-743 6-123 (140)
55 2ep6_A MCTP2 protein; beta san 99.7 1.1E-17 3.9E-22 156.8 10.7 126 478-625 6-132 (133)
56 2fk9_A Protein kinase C, ETA t 99.7 1.1E-17 3.8E-22 162.4 10.1 108 625-749 26-145 (157)
57 3m7f_B E3 ubiquitin-protein li 99.7 2.3E-17 7.7E-22 162.5 12.3 136 482-626 5-142 (176)
58 1rlw_A Phospholipase A2, CALB 99.7 2.1E-17 7.2E-22 153.0 11.3 121 484-625 2-125 (126)
59 1gmi_A Protein kinase C, epsil 99.7 1.5E-17 5.3E-22 156.7 9.0 106 627-749 5-121 (136)
60 3kwu_A MUNC13-1; calcium bindi 99.7 2.4E-17 8.4E-22 157.2 9.6 101 627-734 16-127 (148)
61 3kwu_A MUNC13-1; calcium bindi 99.7 1.7E-16 5.8E-21 151.3 15.0 119 484-624 16-146 (148)
62 1rlw_A Phospholipase A2, CALB 99.7 4.5E-17 1.5E-21 150.8 10.4 102 628-733 3-109 (126)
63 1wfj_A Putative elicitor-respo 99.7 4.2E-17 1.4E-21 153.2 10.1 121 484-627 9-132 (136)
64 2fk9_A Protein kinase C, ETA t 99.7 4.3E-17 1.5E-21 158.3 10.5 114 484-624 28-156 (157)
65 1gmi_A Protein kinase C, epsil 99.7 5.2E-17 1.8E-21 153.0 10.5 117 484-627 5-135 (136)
66 3b7y_A E3 ubiquitin-protein li 99.7 7.8E-17 2.7E-21 154.5 11.8 95 626-723 18-114 (153)
67 3pyc_A E3 ubiquitin-protein li 99.7 2.1E-16 7.3E-21 147.8 12.9 123 484-623 4-131 (132)
68 3m7f_B E3 ubiquitin-protein li 99.7 2E-16 6.8E-21 155.7 12.4 97 625-724 5-103 (176)
69 1wfj_A Putative elicitor-respo 99.7 5.9E-17 2E-21 152.2 7.3 102 626-734 8-113 (136)
70 2csz_A Synaptotagmin-like prot 99.7 3E-18 1E-22 143.2 -1.9 69 117-197 4-75 (76)
71 3pyc_A E3 ubiquitin-protein li 99.7 3E-16 1E-20 146.8 10.7 89 628-722 5-96 (132)
72 2nq3_A Itchy homolog E3 ubiqui 99.6 1.7E-15 5.8E-20 149.3 10.8 122 484-626 35-162 (173)
73 2nq3_A Itchy homolog E3 ubiqui 99.6 1.8E-15 6.2E-20 149.1 10.4 89 626-722 34-122 (173)
74 2cjt_A UNC-13 homolog A, MUNC1 99.5 3.9E-14 1.3E-18 133.1 9.3 83 628-723 5-88 (131)
75 3jzy_A Intersectin 2; C2 domai 99.5 5.5E-14 1.9E-18 160.0 10.3 92 626-723 385-476 (510)
76 2cjt_A UNC-13 homolog A, MUNC1 99.5 1.6E-13 5.5E-18 128.9 11.2 86 484-584 4-91 (131)
77 3l9b_A Otoferlin; C2-domain, b 99.5 1E-13 3.4E-18 131.0 9.5 122 484-628 20-143 (144)
78 3pfq_A PKC-B, PKC-beta, protei 99.5 4.4E-14 1.5E-18 166.8 7.7 125 609-736 155-281 (674)
79 3jzy_A Intersectin 2; C2 domai 99.4 1.6E-13 5.4E-18 156.3 10.8 121 483-623 385-506 (510)
80 3nsj_A Perforin-1; pore formin 99.4 1.9E-13 6.5E-18 156.6 10.5 96 628-731 394-489 (540)
81 1cjy_A CPLA2, protein (cytosol 99.4 1.2E-13 4E-18 163.1 8.9 105 626-734 16-125 (749)
82 2cjs_A UNC-13 homolog A, MUNC1 99.4 2.6E-13 8.8E-18 133.0 9.8 83 628-723 14-97 (167)
83 1djx_A PLC-D1, phosphoinositid 99.4 2E-13 6.8E-18 159.4 9.8 113 627-742 496-612 (624)
84 3nsj_A Perforin-1; pore formin 99.4 1.1E-12 3.8E-17 150.3 13.8 87 485-579 394-481 (540)
85 3l9b_A Otoferlin; C2-domain, b 99.4 7.2E-13 2.5E-17 125.2 7.1 108 628-744 21-131 (144)
86 2cjs_A UNC-13 homolog A, MUNC1 99.3 1.2E-12 4.1E-17 128.2 8.3 86 484-584 13-100 (167)
87 3pfq_A PKC-B, PKC-beta, protei 99.3 3.7E-12 1.3E-16 150.4 13.9 120 469-593 158-278 (674)
88 1djx_A PLC-D1, phosphoinositid 99.3 6.2E-12 2.1E-16 146.9 14.3 124 483-623 495-622 (624)
89 1cjy_A CPLA2, protein (cytosol 99.3 2.1E-12 7.3E-17 152.5 9.7 107 483-594 16-125 (749)
90 3bc1_B Synaptotagmin-like prot 99.2 1.6E-12 5.3E-17 103.6 1.7 40 87-126 2-41 (59)
91 3bxj_A RAS GTPase-activating p 99.2 1.5E-12 5.1E-17 148.0 -1.2 97 628-735 11-116 (483)
92 3bxj_A RAS GTPase-activating p 99.1 4.6E-12 1.6E-16 143.9 -0.3 96 485-593 11-114 (483)
93 2zkm_X 1-phosphatidylinositol- 99.0 4.3E-10 1.5E-14 134.6 9.0 104 627-741 677-786 (799)
94 3ohm_B 1-phosphatidylinositol- 99.0 5.4E-10 1.8E-14 134.1 9.1 102 628-740 725-831 (885)
95 3qr0_A Phospholipase C-beta (P 99.0 6.7E-10 2.3E-14 132.5 9.4 104 628-742 650-759 (816)
96 3ohm_B 1-phosphatidylinositol- 98.9 3.8E-09 1.3E-13 126.7 12.7 117 485-624 725-844 (885)
97 3qr0_A Phospholipase C-beta (P 98.9 5.1E-09 1.7E-13 125.0 13.3 91 485-584 650-744 (816)
98 2zkm_X 1-phosphatidylinositol- 98.9 6.6E-09 2.3E-13 124.3 13.2 91 485-584 678-772 (799)
99 2a20_A Regulating synaptic mem 98.8 1.9E-09 6.7E-14 84.6 2.5 55 134-197 8-62 (62)
100 2enj_A NPKC-theta, protein kin 98.5 6.2E-07 2.1E-11 83.6 11.3 113 485-624 10-129 (138)
101 1yrk_A NPKC-delta, protein kin 98.5 7E-07 2.4E-11 82.1 11.1 113 485-624 6-124 (126)
102 1yrk_A NPKC-delta, protein kin 98.2 3.2E-06 1.1E-10 77.8 9.0 104 629-750 7-114 (126)
103 2enj_A NPKC-theta, protein kin 98.2 3.6E-06 1.2E-10 78.4 7.7 104 629-750 11-119 (138)
104 1joc_A EEA1, early endosomal a 96.6 0.006 2.1E-07 56.4 8.6 54 134-195 68-122 (125)
105 1vfy_A Phosphatidylinositol-3- 94.0 0.019 6.4E-07 48.0 1.9 55 135-197 11-68 (73)
106 2yw8_A RUN and FYVE domain-con 93.9 0.031 1E-06 47.7 3.0 54 135-196 19-73 (82)
107 1z2q_A LM5-1; membrane protein 93.3 0.028 9.7E-07 48.2 1.7 55 134-196 20-77 (84)
108 1y02_A CARP2, FYVE-ring finger 93.3 0.027 9.2E-07 51.6 1.6 49 135-196 19-67 (120)
109 3t7l_A Zinc finger FYVE domain 93.1 0.036 1.2E-06 48.2 2.2 54 135-196 20-74 (90)
110 1wfk_A Zinc finger, FYVE domai 92.6 0.053 1.8E-06 46.9 2.4 55 134-196 8-64 (88)
111 3zyq_A Hepatocyte growth facto 92.0 0.042 1.4E-06 55.8 1.3 54 134-195 163-219 (226)
112 1x4u_A Zinc finger, FYVE domai 91.8 0.092 3.1E-06 44.9 3.0 54 135-196 14-76 (84)
113 1dvp_A HRS, hepatocyte growth 91.8 0.054 1.8E-06 54.7 1.7 54 134-195 160-216 (220)
114 2wxf_A Phosphatidylinositol-4, 91.0 0.41 1.4E-05 58.1 8.5 93 627-722 216-323 (940)
115 3l4c_A Dedicator of cytokinesi 90.4 1.7 5.7E-05 43.8 11.0 58 664-721 77-138 (220)
116 3l4c_A Dedicator of cytokinesi 90.4 1.8 6.1E-05 43.6 11.2 59 521-580 76-139 (220)
117 3hhm_A Phosphatidylinositol-4, 89.1 0.9 3.1E-05 55.7 9.4 94 627-722 354-454 (1091)
118 1e7u_A Phosphatidylinositol 3- 88.1 0.82 2.8E-05 55.6 8.1 94 628-722 218-329 (961)
119 3mpx_A FYVE, rhogef and PH dom 87.3 0.11 3.9E-06 57.2 0.0 53 135-195 375-429 (434)
120 2vrw_B P95VAV, VAV1, proto-onc 86.8 0.38 1.3E-05 52.6 3.9 38 134-178 356-393 (406)
121 3hhm_A Phosphatidylinositol-4, 86.6 3.8 0.00013 50.3 12.6 97 483-582 353-456 (1091)
122 2y3a_A Phosphatidylinositol-4, 85.4 0.63 2.2E-05 57.2 5.1 93 627-722 352-469 (1092)
123 4ayc_A E3 ubiquitin-protein li 83.4 0.87 3E-05 42.1 4.0 44 135-195 53-96 (138)
124 2wxf_A Phosphatidylinositol-4, 83.3 3.3 0.00011 50.3 10.1 95 483-581 215-324 (940)
125 4ayb_P DNA-directed RNA polyme 81.6 0.68 2.3E-05 34.9 2.0 33 136-172 4-36 (48)
126 1e4u_A Transcriptional repress 80.1 0.59 2E-05 39.2 1.4 50 134-195 10-59 (78)
127 1e7u_A Phosphatidylinositol 3- 79.7 15 0.00051 44.7 13.9 97 483-581 216-330 (961)
128 3ky9_A Proto-oncogene VAV; cal 76.9 1.9 6.6E-05 49.5 4.9 38 134-178 528-565 (587)
129 2yho_A E3 ubiquitin-protein li 72.0 1.1 3.7E-05 37.5 0.9 52 116-196 7-59 (79)
130 3fl2_A E3 ubiquitin-protein li 71.6 1.8 6.1E-05 39.1 2.3 46 135-196 52-97 (124)
131 3h0g_L DNA-directed RNA polyme 69.0 2.4 8.3E-05 34.2 2.3 28 135-169 21-48 (63)
132 1weo_A Cellulose synthase, cat 68.9 1.6 5.4E-05 37.5 1.2 50 134-192 15-64 (93)
133 1jm7_A BRCA1, breast cancer ty 68.7 2.6 8.8E-05 37.0 2.7 46 136-195 22-67 (112)
134 2yrb_A Protein fantom; beta sa 68.4 14 0.00049 35.1 7.9 98 483-586 16-121 (156)
135 1z6u_A NP95-like ring finger p 67.1 2.1 7.2E-05 40.3 1.9 45 135-195 78-122 (150)
136 2y3a_A Phosphatidylinositol-4, 66.8 5.2 0.00018 49.3 5.6 78 483-564 351-430 (1092)
137 1iym_A EL5; ring-H2 finger, ub 61.8 2.9 0.0001 31.6 1.5 48 135-195 5-52 (55)
138 2jrp_A Putative cytoplasmic pr 61.6 1.5 5.1E-05 37.1 -0.3 39 136-194 19-59 (81)
139 1twf_L ABC10-alpha, DNA-direct 61.3 2.9 9.8E-05 34.5 1.4 28 135-169 28-55 (70)
140 2ecm_A Ring finger and CHY zin 60.9 1.9 6.6E-05 32.6 0.3 48 134-194 4-51 (55)
141 2gmg_A Hypothetical protein PF 59.0 2.3 7.7E-05 37.8 0.4 70 89-166 9-91 (105)
142 2c2l_A CHIP, carboxy terminus 58.1 6.2 0.00021 40.1 3.6 46 134-195 207-252 (281)
143 3l11_A E3 ubiquitin-protein li 57.6 3 0.0001 36.9 1.0 48 134-197 14-61 (115)
144 4ic3_A E3 ubiquitin-protein li 56.2 4.6 0.00016 33.0 1.8 39 136-195 25-64 (74)
145 3t6p_A Baculoviral IAP repeat- 55.5 5.7 0.0002 42.7 2.9 41 134-195 294-335 (345)
146 2vje_A E3 ubiquitin-protein li 52.5 2.1 7.2E-05 34.2 -0.9 45 134-195 7-54 (64)
147 3j21_g 50S ribosomal protein L 52.4 4.3 0.00015 31.3 0.9 28 165-198 12-39 (51)
148 2ckl_B Ubiquitin ligase protei 50.9 2.5 8.7E-05 40.1 -0.8 46 135-195 54-99 (165)
149 2d8t_A Dactylidin, ring finger 50.0 4 0.00014 32.8 0.4 45 134-195 14-58 (71)
150 2ysl_A Tripartite motif-contai 49.8 4.6 0.00016 32.4 0.8 48 134-195 19-66 (73)
151 1tjl_A DNAK suppressor protein 49.0 22 0.00077 33.5 5.5 53 106-167 88-140 (151)
152 2yql_A PHD finger protein 21A; 48.7 9.3 0.00032 29.6 2.4 50 133-195 7-56 (56)
153 2ku3_A Bromodomain-containing 47.8 8.2 0.00028 31.7 2.0 54 133-196 14-67 (71)
154 2ect_A Ring finger protein 126 47.5 6.4 0.00022 32.0 1.3 48 134-195 14-61 (78)
155 2vje_B MDM4 protein; proto-onc 46.5 3 0.0001 33.1 -0.9 46 134-196 6-54 (63)
156 3lrq_A E3 ubiquitin-protein li 45.7 2.8 9.6E-05 36.4 -1.3 46 136-196 23-68 (100)
157 2ecn_A Ring finger protein 141 44.4 5 0.00017 32.0 0.2 44 134-195 14-57 (70)
158 2l0b_A E3 ubiquitin-protein li 44.2 4.9 0.00017 34.2 0.1 47 134-194 39-85 (91)
159 1fp0_A KAP-1 corepressor; PHD 43.5 9.3 0.00032 32.8 1.7 55 134-201 24-78 (88)
160 2ecv_A Tripartite motif-contai 43.1 5.4 0.00018 32.7 0.2 51 134-196 18-69 (85)
161 2ecy_A TNF receptor-associated 43.1 5 0.00017 31.7 -0.0 46 134-195 14-59 (66)
162 1yuz_A Nigerythrin; rubrythrin 43.0 17 0.00056 36.0 3.7 25 167-195 171-195 (202)
163 1t1h_A Gspef-atpub14, armadill 41.8 5.6 0.00019 32.4 0.1 46 134-195 7-52 (78)
164 2egp_A Tripartite motif-contai 41.7 7.7 0.00026 31.4 0.9 51 134-196 11-63 (79)
165 2yt5_A Metal-response element- 41.7 11 0.00037 30.1 1.8 56 133-196 4-62 (66)
166 2yur_A Retinoblastoma-binding 41.6 5.2 0.00018 32.5 -0.1 47 134-194 14-60 (74)
167 2ecw_A Tripartite motif-contai 41.2 4.6 0.00016 33.2 -0.6 50 134-195 18-68 (85)
168 3j21_i 50S ribosomal protein L 41.0 6.1 0.00021 33.6 0.2 21 184-208 51-71 (83)
169 1we9_A PHD finger family prote 41.0 14 0.00047 29.3 2.3 55 134-196 5-59 (64)
170 1x4j_A Ring finger protein 38; 40.4 3.8 0.00013 33.2 -1.2 47 134-194 22-68 (75)
171 2kiz_A E3 ubiquitin-protein li 40.1 4.9 0.00017 31.9 -0.5 48 134-195 13-60 (69)
172 3htk_C E3 SUMO-protein ligase 39.8 9.1 0.00031 39.5 1.3 48 134-195 180-229 (267)
173 2ecj_A Tripartite motif-contai 39.8 10 0.00034 28.7 1.3 45 134-192 14-58 (58)
174 2ct2_A Tripartite motif protei 39.7 6.2 0.00021 32.7 0.0 52 134-195 14-65 (88)
175 1jm7_B BARD1, BRCA1-associated 39.6 13 0.00044 33.0 2.2 41 136-195 23-64 (117)
176 2csy_A Zinc finger protein 183 39.6 4.4 0.00015 33.4 -1.0 46 134-196 14-59 (81)
177 2y43_A E3 ubiquitin-protein li 39.3 5.9 0.0002 34.0 -0.2 44 136-195 23-66 (99)
178 1chc_A Equine herpes virus-1 r 38.4 4.9 0.00017 31.7 -0.8 45 135-195 5-49 (68)
179 2puy_A PHD finger protein 21A; 38.3 18 0.00062 28.3 2.6 51 134-197 4-54 (60)
180 1mm2_A MI2-beta; PHD, zinc fin 38.0 27 0.00093 27.5 3.6 50 133-195 7-56 (61)
181 3iz5_m 60S ribosomal protein L 37.6 7.5 0.00026 33.6 0.2 21 184-208 52-72 (92)
182 1bor_A Transcription factor PM 37.1 12 0.00042 28.6 1.4 43 134-196 5-47 (56)
183 2ckl_A Polycomb group ring fin 36.1 7.3 0.00025 34.0 -0.1 45 135-195 15-59 (108)
184 2ea5_A Cell growth regulator w 35.9 11 0.00036 30.4 0.9 41 134-195 14-55 (68)
185 3izc_m 60S ribosomal protein R 35.7 8.1 0.00028 33.4 0.1 21 184-208 52-72 (92)
186 2djb_A Polycomb group ring fin 35.0 5.5 0.00019 32.1 -1.1 46 134-195 14-59 (72)
187 2l43_A N-teminal domain from h 34.4 10 0.00035 32.4 0.6 53 134-196 24-76 (88)
188 2ro1_A Transcription intermedi 34.0 18 0.00062 35.2 2.4 50 135-197 2-51 (189)
189 2ysj_A Tripartite motif-contai 33.9 9.2 0.00031 29.7 0.2 45 134-192 19-63 (63)
190 2f42_A STIP1 homology and U-bo 33.1 28 0.00096 33.7 3.5 46 133-194 104-149 (179)
191 1xwh_A Autoimmune regulator; P 33.1 21 0.00071 28.6 2.2 50 134-196 7-56 (66)
192 2yrc_A Protein transport prote 32.3 27 0.00091 27.6 2.6 33 159-196 9-43 (59)
193 3v2d_5 50S ribosomal protein L 31.9 13 0.00045 29.6 0.7 24 135-177 30-53 (60)
194 3knv_A TNF receptor-associated 30.9 11 0.00037 35.0 0.1 46 134-195 30-75 (141)
195 2zjr_Z 50S ribosomal protein L 30.3 16 0.00054 29.1 1.0 24 135-177 30-53 (60)
196 2ep4_A Ring finger protein 24; 30.2 8.7 0.0003 30.9 -0.6 47 134-194 14-60 (74)
197 2e6r_A Jumonji/ARID domain-con 30.0 42 0.0014 28.8 3.7 64 134-208 15-78 (92)
198 3jyw_9 60S ribosomal protein L 29.9 20 0.00067 29.6 1.5 21 184-208 42-62 (72)
199 1wev_A Riken cDNA 1110020M19; 29.8 20 0.00069 30.5 1.7 56 135-197 16-74 (88)
200 2ecg_A Baculoviral IAP repeat- 29.5 26 0.00088 28.4 2.2 39 136-195 26-65 (75)
201 2ct7_A Ring finger protein 31; 29.4 19 0.00064 30.4 1.4 36 136-177 26-61 (86)
202 2lri_C Autoimmune regulator; Z 29.3 19 0.00066 29.0 1.3 49 134-195 11-59 (66)
203 2qzq_A Axin interactor, dorsal 29.3 73 0.0025 30.0 5.5 92 628-722 14-112 (152)
204 3gox_A Restriction endonucleas 28.9 13 0.00044 36.4 0.3 40 124-167 66-112 (200)
205 3ztg_A E3 ubiquitin-protein li 28.6 9 0.00031 32.2 -0.8 48 134-195 12-59 (92)
206 3o36_A Transcription intermedi 28.4 29 0.001 33.4 2.8 50 134-196 3-52 (184)
207 2l5u_A Chromodomain-helicase-D 28.3 25 0.00087 27.7 1.9 49 134-195 10-58 (61)
208 1v87_A Deltex protein 2; ring- 28.0 11 0.00038 33.0 -0.3 61 135-195 25-91 (114)
209 2ea6_A Ring finger protein 4; 27.6 4.3 0.00015 32.0 -2.9 49 134-194 14-64 (69)
210 3ng2_A RNF4, snurf, ring finge 27.5 4.7 0.00016 32.1 -2.7 52 134-195 9-60 (71)
211 2kgo_A Uncharacterized protein 27.4 23 0.00078 31.6 1.6 16 186-201 77-92 (108)
212 2y1n_A E3 ubiquitin-protein li 27.3 11 0.00037 41.1 -0.6 44 136-195 333-376 (389)
213 2xeu_A Ring finger protein 4; 26.9 4.7 0.00016 31.2 -2.7 49 135-195 3-53 (64)
214 1lko_A Rubrerythrin all-iron(I 26.8 36 0.0012 33.1 3.1 49 96-145 117-165 (191)
215 1wim_A KIAA0161 protein; ring 26.8 19 0.00065 30.5 1.0 49 135-195 5-61 (94)
216 2enn_A NPKC-theta, protein kin 26.5 22 0.00074 29.4 1.2 38 134-178 33-70 (77)
217 3u5n_A E3 ubiquitin-protein li 25.7 24 0.00083 34.7 1.6 50 134-196 6-55 (207)
218 3hct_A TNF receptor-associated 25.4 8.9 0.0003 34.1 -1.5 46 134-195 17-62 (118)
219 2yrb_A Protein fantom; beta sa 25.3 1.1E+02 0.0037 28.9 6.0 71 649-722 40-115 (156)
220 1914_A Signal recognition part 24.9 20 0.00068 36.2 0.8 34 35-74 152-185 (232)
221 4b6d_A RAC GTPase-activating p 24.3 22 0.00077 28.2 0.9 36 135-178 19-54 (61)
222 3twe_A Alpha4H; unknown functi 24.0 88 0.003 20.1 3.3 11 111-121 14-24 (27)
223 1l8d_A DNA double-strand break 23.8 78 0.0027 27.6 4.5 35 112-146 24-58 (112)
224 2olm_A Nucleoporin-like protei 23.5 46 0.0016 30.9 3.0 10 135-144 25-34 (140)
225 3jyw_9 60S ribosomal protein L 22.8 47 0.0016 27.4 2.5 26 114-146 12-37 (72)
226 1m2v_B SEC24, protein transpor 22.7 29 0.001 42.1 1.8 35 159-198 228-262 (926)
227 1z60_A TFIIH basal transcripti 22.7 22 0.00077 28.1 0.5 43 136-192 16-58 (59)
228 2kq9_A DNAK suppressor protein 22.5 28 0.00096 31.0 1.2 50 109-167 61-110 (112)
229 1wff_A Riken cDNA 2810002D23 p 22.4 34 0.0012 29.1 1.6 33 135-177 25-57 (85)
230 3efo_B SEC24 related gene fami 22.3 29 0.00099 41.2 1.7 35 159-198 98-132 (770)
231 3cc2_Z 50S ribosomal protein L 22.0 21 0.00072 32.1 0.3 21 184-208 76-96 (116)
232 1pcx_A Protein transport prote 22.0 31 0.001 41.2 1.8 35 159-198 112-146 (810)
233 2ri7_A Nucleosome-remodeling f 21.7 17 0.00057 34.7 -0.5 55 135-198 8-62 (174)
234 1ffk_W Ribosomal protein L37AE 21.6 22 0.00075 29.4 0.3 21 184-208 43-63 (73)
235 3eh2_A Protein transport prote 21.3 31 0.0011 40.9 1.7 35 159-198 94-128 (766)
236 1vq8_Z 50S ribosomal protein L 21.2 26 0.00087 29.7 0.6 21 184-208 43-63 (83)
237 2yuu_A NPKC-delta, protein kin 21.1 39 0.0013 28.2 1.8 38 134-178 27-64 (83)
238 3eh1_A Protein transport prote 20.9 34 0.0012 40.5 1.9 34 159-198 85-118 (751)
239 2xb1_A Pygopus homolog 2, B-ce 20.7 26 0.00089 30.8 0.6 54 136-197 4-63 (105)
240 1g25_A CDK-activating kinase a 20.5 12 0.00042 29.2 -1.4 49 135-195 3-52 (65)
241 2enz_A NPKC-theta, protein kin 20.4 52 0.0018 26.0 2.3 38 134-178 22-59 (65)
242 2db6_A SH3 and cysteine rich d 20.4 17 0.00058 29.8 -0.6 38 134-178 27-64 (74)
243 2kre_A Ubiquitin conjugation f 20.3 23 0.00079 30.7 0.2 44 134-194 28-71 (100)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=3.7e-46 Score=394.64 Aligned_cols=269 Identities=34% Similarity=0.542 Sum_probs=241.2
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeec
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSE 548 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~ 548 (754)
..+|+|.|++.|+...+.|.|+|++|+||+.+|..+.+||||+|++.++.. ..++|+++.+++||+|||+|.|. +..
T Consensus 3 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~--~~~~T~~~~~~~nP~wne~f~f~-v~~ 79 (284)
T 2r83_A 3 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK--KKFETKVHRKTLNPVFNEQFTFK-VPY 79 (284)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTT--SCEECCCCCSCSSCEEEEEEEEC-CCG
T ss_pred cceeEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCC--ceEeCCcccCCCCCeeCceEEEE-ech
Confidence 569999999999999999999999999999999999999999999987543 57899999999999999999995 676
Q ss_pred cccCcceEEEEEeeCCCCCC-ccceeeeecCcccCCCCccceEeecccCCCCCccccccccccccccceeEEeeeccccc
Q psy7848 549 TDLSLQSLHILVLDDDKYGH-DFLGEARFPLNRLRPHISRDLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCFSTKK 627 (754)
Q Consensus 549 ~el~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y~p~~ 627 (754)
.++....|.|.|||+|.++. +|||++.|+|.++..+.....|+.|.. .. .......|+|.+.+.|.+..
T Consensus 80 ~~~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~------~~----~~~~~~~G~i~l~l~~~p~~ 149 (284)
T 2r83_A 80 SELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS------AE----KEEQEKLGDICFSLRYVPTA 149 (284)
T ss_dssp GGCTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBC------CS----SCCCCCCCEEEEEEEEETTT
T ss_pred HHhCcCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeec------cc----cccccccccEEEEEEecCcC
Confidence 67777899999999999987 999999999999987766666666642 11 01134679999999999999
Q ss_pred cceeeccccccccccCCCCCCCCceEEEEecCCCCc-ceeeeeeecCCCCCccceeEEEEeecCccCCCeEEEEEEEccC
Q psy7848 628 RALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK-RKYKTGVKWKTLNPIFNEEFAIETKITELSKQTLVITVWDKDY 706 (754)
Q Consensus 628 g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k-~k~KT~v~kkTlNP~wNEtF~F~V~~~dL~~~~L~ItV~D~d~ 706 (754)
+.|.|.|++|+||+.+|.+|.+||||+|++.+++.. .++||.++++|+||+|||+|.|.+...++....|.|+|||++.
T Consensus 150 ~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~ 229 (284)
T 2r83_A 150 GKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK 229 (284)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCS
T ss_pred CceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCC
Confidence 999999999999999999999999999999865433 3889999999999999999999998888888899999999999
Q ss_pred CCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecCC
Q psy7848 707 GKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSIK 750 (754)
Q Consensus 707 ~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~~ 750 (754)
+++|++||.+.|++.+.+.++.||++|+.+|+.++++||.|++.
T Consensus 230 ~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 230 IGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp SSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred CCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 99999999999999999999999999999999999999999874
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=100.00 E-value=9.4e-46 Score=395.23 Aligned_cols=269 Identities=30% Similarity=0.469 Sum_probs=235.2
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeec
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSE 548 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~ 548 (754)
..+|+|+|++.|+...+.|.|+|++|++|+.+|..|.+||||+|++.+++. ..++|+++++|+||+|||+|.|. +..
T Consensus 4 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~--~~~kT~v~~~t~nP~wne~f~f~-v~~ 80 (296)
T 1dqv_A 4 APCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRK--KKFQTKVHRKTLNPIFNETFQFS-VPL 80 (296)
T ss_dssp CSSCEEEEEEECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTT--SCEECCCCCSCSSCEEEEEEEEE-CCG
T ss_pred CeeeEEEEEEEEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCC--eeEeCCccCCCCCCcEeeEEEEE-ecH
Confidence 579999999999999999999999999999999999999999999986543 67899999999999999999995 777
Q ss_pred cccCcceEEEEEeeCCCCCC-ccceeeeec-CcccCC-CCccceEeecccCCCCCccccccccccccccceeEEeeeccc
Q psy7848 549 TDLSLQSLHILVLDDDKYGH-DFLGEARFP-LNRLRP-HISRDLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCFST 625 (754)
Q Consensus 549 ~el~~~~L~~sV~D~d~~g~-dfLGev~I~-L~~L~~-~~~~~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y~p 625 (754)
.++....|+|.|||+|.+++ +|||++.|+ +.++.. ......|..|. ... ......|+|.+++.|.+
T Consensus 81 ~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~------~~~-----~~~~~~G~i~vsl~y~~ 149 (296)
T 1dqv_A 81 AELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDIL------EGG-----SEKADLGELNFSLCYLP 149 (296)
T ss_dssp GGGSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECB------CCS-----SCCSCCCEEEEEEEEET
T ss_pred HHhcCCEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeeccc------ccc-----ccccccceEEEEEEecc
Confidence 77777899999999999987 999999996 444432 22223344432 211 11356799999999999
Q ss_pred cccceeeccccccccccCCCCCCCCceEEEEecCCCCc-ceeeeeeecCCCCCccceeEEEEeecCccCCCeEEEEEEEc
Q psy7848 626 KKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK-RKYKTGVKWKTLNPIFNEEFAIETKITELSKQTLVITVWDK 704 (754)
Q Consensus 626 ~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k-~k~KT~v~kkTlNP~wNEtF~F~V~~~dL~~~~L~ItV~D~ 704 (754)
..+.|.|.|++|+||+++|.+|.+||||++++.+++.. .++||.++++|+||+|||+|.|.|...++....|.|+|||+
T Consensus 150 ~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 229 (296)
T 1dqv_A 150 TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDY 229 (296)
T ss_dssp TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEEC
T ss_pred ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeC
Confidence 99999999999999999999999999999999865433 48999999999999999999999988788778999999999
Q ss_pred cCCCCCceeEEEEEecCCCCc-hhhhHHhhhcCCCcceeeEEeecCCC
Q psy7848 705 DYGKSNDYLGCLELCCNSKGD-RLRHWVDMMKYPDHKHEGIHNLSIKP 751 (754)
Q Consensus 705 d~~~~ddfLG~v~L~l~s~ge-~~~hW~~ll~~P~~~ie~Wh~L~~~~ 751 (754)
+.+++|++||.+.|++.+.+. +..||++|+.+|++++++||.|++..
T Consensus 230 d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~~ 277 (296)
T 1dqv_A 230 DCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEEK 277 (296)
T ss_dssp CSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBCC
T ss_pred CCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCcc
Confidence 999999999999999999887 89999999999999999999999865
No 3
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=100.00 E-value=1.8e-37 Score=292.21 Aligned_cols=129 Identities=47% Similarity=1.039 Sum_probs=117.3
Q ss_pred ccCCCCCCCHHHHHHHHHHHHhhHHHhHHHHHHHHHHHHHHHHhhhhccCCCccccccccccccCCCccccccccCCCCc
Q psy7848 81 RWKKPEPLDPTEQEKIEEVIKRAEALDYIEQERVGRLVERVDNMKRNVTGGAAAAHACALCGDKFSPIFDRLGLFGAKCL 160 (754)
Q Consensus 81 ~~~~~~~Lt~~E~e~I~~Vl~R~~~l~~~E~~Ri~~L~~~l~~~k~~~~~~~~~~~~C~~C~~~~g~~~~~~~~~~~~~~ 160 (754)
++++.+|||+||+++|++||+||++++++|++||++|+++|+++|+++.++ ++++|++|+++|| |++++++
T Consensus 3 ~~~dls~LteeE~~~Il~Vl~Rd~~l~~~E~~ri~kL~~~l~~~k~~~~~~--~~~~C~~C~~~~g-------~l~~~g~ 73 (134)
T 1zbd_B 3 HMRKQEELTDEEKEIINRVIARAEKMETMEQERIGRLVDRLETMRKNVAGD--GVNRCILCGEQLG-------MLGSASV 73 (134)
T ss_dssp -----CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSC--SSSBCSSSCCBCS-------TTSCCEE
T ss_pred CCCCcccCCHHHHHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHHHHHhccC--CCccccccCCCcc-------cccCCCC
Confidence 467889999999999999999999999999999999999999999997764 5699999999999 8999999
Q ss_pred cccccccccccccccccccCCCCCCceeeccchhhhhhhhhcccccccccCCCcccccccccccccCCCcccCCcccccC
Q psy7848 161 VCHDCRGGVCQKCGIESVSASKKENIWLCKICAETREMWKKSNAWFFKVSGLPYECLDHYTTEAVSGLPYECLDHYTTEA 240 (754)
Q Consensus 161 ~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~rel~~~sG~Wf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (754)
+|.+|+++||++||++++ +++++.+|+|++|+++|++|++||+|||+
T Consensus 74 ~C~~C~~~VC~~C~~~~~-~~~~~~~W~C~vC~k~rel~~kSG~Wf~~-------------------------------- 120 (134)
T 1zbd_B 74 VCEDCKKNVCTKCGVETS-NNRPHPVWLCKICLEQREVWKRSGAWFFK-------------------------------- 120 (134)
T ss_dssp ECTTTCCEEETTSEEECC-CSSSSCCEEEHHHHHHHHHHHHTSHHHHT--------------------------------
T ss_pred CCCCCCcccccccCCccC-CCCCccceechhhHHHHHHHHhhhHHHHh--------------------------------
Confidence 999999999999999996 45678899999999999999999999999
Q ss_pred CCCcccCCCCC
Q psy7848 241 GLPKYTIPKKT 251 (754)
Q Consensus 241 ~l~k~~~p~~~ 251 (754)
++|++++|.++
T Consensus 121 ~~~k~~~p~~~ 131 (134)
T 1zbd_B 121 GFPKQVLPQPM 131 (134)
T ss_dssp SCCCCCCCCCC
T ss_pred cCcccccCCCC
Confidence 78999999887
No 4
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=100.00 E-value=2.6e-37 Score=297.01 Aligned_cols=132 Identities=21% Similarity=0.392 Sum_probs=118.1
Q ss_pred CCCCCCCHHHHHHHHHHHHhhHHHhHHHHHHHHHHHHHHHHhhhh--ccC--CCccccccccccccCCCccccccccCCC
Q psy7848 83 KKPEPLDPTEQEKIEEVIKRAEALDYIEQERVGRLVERVDNMKRN--VTG--GAAAAHACALCGDKFSPIFDRLGLFGAK 158 (754)
Q Consensus 83 ~~~~~Lt~~E~e~I~~Vl~R~~~l~~~E~~Ri~~L~~~l~~~k~~--~~~--~~~~~~~C~~C~~~~g~~~~~~~~~~~~ 158 (754)
.+..+|||||+++||+||+||++|+++||+||++|+++|++++.+ ..+ +..++++|++|+++|| |++|+
T Consensus 12 ~dLs~LteeEr~~Il~VL~Rd~~l~~~EeeRi~kLk~~l~~~~~k~~~~~~~~~~~~~~C~~C~~~fg-------~l~~~ 84 (153)
T 2zet_C 12 LDLSTLTDEEAEHVWAVVQRDFDLRRREEERLQGLKGKIQKESSKRELLSDTAHLNETHCARCLQPYR-------LLLNS 84 (153)
T ss_dssp CCCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTGGGTBCTTTCCBGG-------GCSSC
T ss_pred CCcccCCHHHHHHHHHHHHhHHHHHHhHHHHHHHHHHHHHHHHHHhhhhcccccCCCccchhhcCccc-------cccCC
Confidence 567899999999999999999999999999999999999999543 333 3457899999999999 89999
Q ss_pred CccccccccccccccccccccCCCCCCceeeccchhhhhhhhhcccccccccCCCcccccccccccccCC
Q psy7848 159 CLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETREMWKKSNAWFFKVSGLPYECLDHYTTEAVSGL 228 (754)
Q Consensus 159 ~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~rel~~~sG~Wf~~~~~~~~~~~~~~~~~~~~~~ 228 (754)
+++|.||+++||++|+++++ ++.+|+|++|++++++|++||+|||++++++|+ +||+|+|+..
T Consensus 85 g~~C~~C~~~VC~~C~~~~~----~~~~W~C~vC~k~rel~~kSGeWf~~~~~~rfk---~~gs~~v~~s 147 (153)
T 2zet_C 85 RRQCLECSLFVCKSCSHAHP----EEQGWLCDPCHLARVVKIGSLEWYYQHVRARFK---RFGSAKVIRS 147 (153)
T ss_dssp CEECTTTCCEECGGGEECCS----SSSSCEEHHHHHHHHHHHHHCHHHHHHHHTTSS---SCHHHHHHHH
T ss_pred CCcCCCCCchhhcccccccC----CCCcEeeHHHHHHHHHHHhccHHHHHHHHhhhc---cCcchHHhhh
Confidence 99999999999999999887 588999999999999999999999997666665 7999977443
No 5
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.95 E-value=6.5e-28 Score=227.20 Aligned_cols=136 Identities=38% Similarity=0.637 Sum_probs=128.3
Q ss_pred cceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCc-ceeeeeeecCCCCCccceeEEEEeecCcc
Q psy7848 614 HGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK-RKYKTGVKWKTLNPIFNEEFAIETKITEL 692 (754)
Q Consensus 614 ~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k-~k~KT~v~kkTlNP~wNEtF~F~V~~~dL 692 (754)
+|+|.+++.|.+..+.|.|.|++|+||+.++.+|.+||||++++.++... .+++|+++++|+||+|||+|.|.+...++
T Consensus 2 ~G~l~~sl~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l 81 (138)
T 3n5a_A 2 RGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKL 81 (138)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGG
T ss_pred CcEEEEEEEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhc
Confidence 69999999999999999999999999999999999999999999865444 38899999999999999999999988888
Q ss_pred CCCeEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecC
Q psy7848 693 SKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSI 749 (754)
Q Consensus 693 ~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~ 749 (754)
....|.|+|||++.+++|++||.+.|++.+.+.+..||++|+.+|++++++||.|.|
T Consensus 82 ~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~p 138 (138)
T 3n5a_A 82 RETTIIITVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQPVAQWHQLKA 138 (138)
T ss_dssp GGEEEEEEEEECCSSSCCEEEEEEEESSSSCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred CceEEEEEEEECCCCCCCcEEEEEEEccccCChHHHHHHHHHhCCCCeEEEEeecCC
Confidence 788999999999999999999999999999999999999999999999999999986
No 6
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.94 E-value=4.2e-27 Score=226.51 Aligned_cols=139 Identities=28% Similarity=0.474 Sum_probs=122.2
Q ss_pred ccccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCc-ceeeeeeecCCCCCccceeEEEEeec
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK-RKYKTGVKWKTLNPIFNEEFAIETKI 689 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k-~k~KT~v~kkTlNP~wNEtF~F~V~~ 689 (754)
....|+|.+++.|.+..+.|.|.|++|+||+.++.+|.+||||+|++.++... .++||+++++|+||+|||+|.|.+..
T Consensus 13 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 92 (153)
T 1w15_A 13 PSGRGELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPC 92 (153)
T ss_dssp ---CCEEEEEEEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCS
T ss_pred CccccEEEEEEEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCH
Confidence 56789999999999999999999999999999999999999999999875433 28899999999999999999999988
Q ss_pred CccCCCeEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecC
Q psy7848 690 TELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSI 749 (754)
Q Consensus 690 ~dL~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~ 749 (754)
.++....|.|+|||++.+++|++||.+.|++...+.+..||++|+.+|+.++++||.|.+
T Consensus 93 ~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~p~~~~~~Wh~L~~ 152 (153)
T 1w15_A 93 ESLEEISVEFLVLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQIAKWHMLCD 152 (153)
T ss_dssp SSSTTEEEEEEEEECCTTSCCEEEEEEEESTTCCSHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred HHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCchHHHHHHHHHhCCCCeeeecccccc
Confidence 888778999999999999999999999999999889999999999999999999999975
No 7
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.94 E-value=6.3e-27 Score=226.92 Aligned_cols=140 Identities=34% Similarity=0.545 Sum_probs=130.8
Q ss_pred ccccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCc-ceeeeeeecCCCCCccceeEEEEeec
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK-RKYKTGVKWKTLNPIFNEEFAIETKI 689 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k-~k~KT~v~kkTlNP~wNEtF~F~V~~ 689 (754)
....|+|.++|.|.+..+.|.|.|++|+||+.++.+|.+||||+|++.+++.. .++||+++++|+||+|||+|.|.|..
T Consensus 8 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 87 (159)
T 1tjx_A 8 LEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPF 87 (159)
T ss_dssp GGCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCG
T ss_pred cCcCCeEEEEEEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCH
Confidence 46789999999999999999999999999999999999999999999765433 38899999999999999999999988
Q ss_pred CccCCCeEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecCC
Q psy7848 690 TELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSIK 750 (754)
Q Consensus 690 ~dL~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~~ 750 (754)
.++....|.|+|||++.++.|++||.+.|++.+.+.+++||++|+.+|+..+++||.|.+.
T Consensus 88 ~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 88 EQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 148 (159)
T ss_dssp GGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCH
T ss_pred HHhCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCc
Confidence 8887889999999999999999999999999999999999999999999999999999874
No 8
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.94 E-value=1.4e-26 Score=226.23 Aligned_cols=141 Identities=50% Similarity=0.840 Sum_probs=129.5
Q ss_pred ccccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCc-ceeeeeeecCCCCCccceeEEEEeec
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK-RKYKTGVKWKTLNPIFNEEFAIETKI 689 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k-~k~KT~v~kkTlNP~wNEtF~F~V~~ 689 (754)
....|+|.+++.|.+..+.|.|.|++|+||++++.+|.+||||+|++.++.++ .++||+++++|+||+|||+|.|.+..
T Consensus 20 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 99 (166)
T 2cm5_A 20 IEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKH 99 (166)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCG
T ss_pred cCccceEEEEEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcch
Confidence 46789999999999999999999999999999999999999999999875443 48999999999999999999999987
Q ss_pred CccCCCeEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecCCC
Q psy7848 690 TELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSIKP 751 (754)
Q Consensus 690 ~dL~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~~~ 751 (754)
.++....|.|+|||++.+++|++||.+.|++...+++..||++|+..|+..+++||.|.++.
T Consensus 100 ~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~~~~ 161 (166)
T 2cm5_A 100 SDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNEN 161 (166)
T ss_dssp GGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCEEEEEECBC--
T ss_pred HhcCCCEEEEEEEECCCCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCcceEeeECCCcc
Confidence 78878899999999999999999999999999999999999999999999999999998753
No 9
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.88 E-value=1.8e-23 Score=202.72 Aligned_cols=128 Identities=17% Similarity=0.189 Sum_probs=111.0
Q ss_pred ccccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCc--ceeeeeeecCCCCCccceeEEEEee
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK--RKYKTGVKWKTLNPIFNEEFAIETK 688 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k--~k~KT~v~kkTlNP~wNEtF~F~V~ 688 (754)
....|+|+++|.|.+..+.|.|.|++|+||+++|.+|.+||||++++.+..+. .++||+++++|+||+|||+|.|.|.
T Consensus 26 ~~~~G~l~~sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~ 105 (155)
T 2z0u_A 26 AVGATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMS 105 (155)
T ss_dssp --CCEEEEEEEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECC
T ss_pred cCCcEEEEEEEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcC
Confidence 46789999999999999999999999999999999999999999999874333 3899999999999999999999998
Q ss_pred cCccCCCeEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecC
Q psy7848 689 ITELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSI 749 (754)
Q Consensus 689 ~~dL~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~ 749 (754)
..++....|.|+|||+|.+++|++||.+.|++.... ..+....+||.|++
T Consensus 106 ~~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~-----------~~~~~~~~W~~L~~ 155 (155)
T 2z0u_A 106 YPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVC-----------RSGERSTRWYNLLS 155 (155)
T ss_dssp HHHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSC-----------TTCCCEEEEEEEBC
T ss_pred HHHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHcc-----------CCCCccccceEccC
Confidence 777778899999999999999999999999998641 12345667777764
No 10
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.87 E-value=1.9e-22 Score=193.01 Aligned_cols=130 Identities=29% Similarity=0.463 Sum_probs=113.4
Q ss_pred ccccceeEEeeeccccccceeeccccccccccCC-CCCCCCceEEEEecCCCCc-ceeeeeeecCCCCCccceeEEEEee
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMD-SNGFSDPFIKLYLKPDLHK-RKYKTGVKWKTLNPIFNEEFAIETK 688 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d-~~G~sDPYVKV~L~~~~~k-~k~KT~v~kkTlNP~wNEtF~F~V~ 688 (754)
...+|+|.+++.|.+..+.|.|.|++|+||++++ .+|.+||||+|++.++... .++||+++++|+||+|||+|.|.|.
T Consensus 6 ~~~~G~l~~sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 85 (148)
T 3fdw_A 6 IFVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIP 85 (148)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECC
T ss_pred CccceEEEEEEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeC
Confidence 4678999999999999999999999999999998 5899999999999876543 4899999999999999999999998
Q ss_pred cCccCCCeEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecCCCC
Q psy7848 689 ITELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSIKPL 752 (754)
Q Consensus 689 ~~dL~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~~~~ 752 (754)
..++....|.|+|||++.+++|++||.+.|++... . .+..+++|+.|+++..
T Consensus 86 ~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l----------~--~~~~~~~W~~L~~~~~ 137 (148)
T 3fdw_A 86 ESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSW----------K--LDKKLDHCLPLHGKIS 137 (148)
T ss_dssp STTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHH----------H--HHCCSEEEEECBCC--
T ss_pred hhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccc----------c--ccCCccceEECcCccc
Confidence 88888889999999999999999999999998742 1 1235678888888764
No 11
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.87 E-value=4.5e-22 Score=191.72 Aligned_cols=128 Identities=25% Similarity=0.435 Sum_probs=110.1
Q ss_pred ccccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCc-ceeeeeeecCCCCCccceeEEEEeec
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK-RKYKTGVKWKTLNPIFNEEFAIETKI 689 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k-~k~KT~v~kkTlNP~wNEtF~F~V~~ 689 (754)
....|+|.|+|.|.+..+.|.|.|++|+||++++ +|.+||||+|++.++... .++||+++++|+||+|||+|.|.+..
T Consensus 10 ~~~~G~~~lsL~y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 88 (153)
T 3fbk_A 10 HKVQGAGQLRLSIDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQE 88 (153)
T ss_dssp ---CCCCEEEEEEEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCG
T ss_pred cCCCCEEEEEEEEECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEeccc
Confidence 5789999999999999999999999999999998 689999999999876533 48999999999999999999999977
Q ss_pred CccCCCeEEEEEEEccCCCC-CceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecCCC
Q psy7848 690 TELSKQTLVITVWDKDYGKS-NDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSIKP 751 (754)
Q Consensus 690 ~dL~~~~L~ItV~D~d~~~~-ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~~~ 751 (754)
.++. ..|.|+|||++.++. |+|||.+.|++.. +.+|+..+++||.|+++.
T Consensus 89 ~~~~-~~L~i~V~d~d~~~~~d~~lG~~~i~l~~-----------l~~~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 89 EDDQ-KRLLVTVWNRASQSRQSGLIGCMSFGVKS-----------LLTPDKEISGWYYLLGEH 139 (153)
T ss_dssp GGTT-SEEEEEEEECCSSGGGCEEEEEEEEEHHH-----------HTC--CCEEEEEECBCTT
T ss_pred HHhC-CEEEEEEEeCCCCCCCCcEEEEEEEEHHH-----------hcCCCCccccEEECCChh
Confidence 6765 459999999999876 9999999999873 345678899999998864
No 12
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.86 E-value=1.1e-21 Score=188.83 Aligned_cols=127 Identities=34% Similarity=0.541 Sum_probs=112.3
Q ss_pred ccccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEeecC
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKIT 690 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V~~~ 690 (754)
....|+|.++|.|.+..+.|.|.|++|+||+.++.+|.+||||+|++.++. ..++||+++++|+||+|||+|.|.+...
T Consensus 25 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~-~~~~kT~v~~~t~nP~wne~f~f~v~~~ 103 (152)
T 1rsy_A 25 EEKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDK-KKKFETKVHRKTLNPVFNEQFTFKVPYS 103 (152)
T ss_dssp -CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTC-CSCEECCCCTTCSSCEEEEEEEECCCHH
T ss_pred CCCceEEEEEEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCC-CceEeccccCCCCCCcCcccEEEeecHH
Confidence 456899999999999999999999999999999999999999999998653 4588999999999999999999999877
Q ss_pred ccCCCeEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecCC
Q psy7848 691 ELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSIK 750 (754)
Q Consensus 691 dL~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~~ 750 (754)
++....|.|+|||++.+++|++||.+.|++... ..+..++.||.|++.
T Consensus 104 ~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l------------~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 104 ELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTV------------DFGHVTEEWRDLQSA 151 (152)
T ss_dssp HHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGC------------CCSSCEEEEEECBCC
T ss_pred HcCCCEEEEEEEECCCCCCCcEEEEEEEEchhc------------cCCCCcceEEECCCC
Confidence 777899999999999999999999999999854 235567788888764
No 13
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.86 E-value=1.4e-21 Score=185.14 Aligned_cols=125 Identities=18% Similarity=0.180 Sum_probs=108.4
Q ss_pred ccccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEeecC
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKIT 690 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V~~~ 690 (754)
....|+|+++|.|.+..+.|.|.|++|+ ++|.+|.+||||+|++.++.+..++||+++++|+||+|||+|.|.+...
T Consensus 9 ~~~~G~l~~sl~y~~~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~ 85 (138)
T 1wfm_A 9 WNQAPKLHYCLDYDCQKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEE 85 (138)
T ss_dssp CSSCCEEEEEEEEETTTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTT
T ss_pred CCcceEEEEEEEEeCCCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHH
Confidence 3568999999999999999999999999 4688999999999999875445588999999999999999999999888
Q ss_pred ccCCCeEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecCC
Q psy7848 691 ELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSIK 750 (754)
Q Consensus 691 dL~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~~ 750 (754)
++....|.|+|||+|.+++|++||.+.|++.... .+...+.|+.|.+.
T Consensus 86 ~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~------------~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 86 ELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTS------------VPLGAAQWGELKTS 133 (138)
T ss_dssp SSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSS------------SCTTCCEEEECCCC
T ss_pred HcCCCEEEEEEEECCCCCCCcEEEEEEEEccccc------------CcccccceeeCcCC
Confidence 8888999999999999999999999999998752 13345566666653
No 14
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.86 E-value=9.3e-22 Score=186.85 Aligned_cols=127 Identities=34% Similarity=0.549 Sum_probs=113.9
Q ss_pred ccccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEeecC
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKIT 690 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V~~~ 690 (754)
....|+|.+++.|.+..+.|.|.|++|+||+.++.+|.+||||+|++.++. ..+++|+++++|+||+|||+|.|.+...
T Consensus 17 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~-~~~~kT~v~~~t~nP~wne~f~f~v~~~ 95 (143)
T 3f04_A 17 VEKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDK-KKKFETKVHRKTLNPVFNEQFTFKVPYS 95 (143)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCC-SCCEECCCCCSCSSCEEEEEEEECCCHH
T ss_pred ccCeEEEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCC-CccEECccCcCCCCCcCcCeEEEeecHh
Confidence 567899999999999999999999999999999999999999999997653 4589999999999999999999999877
Q ss_pred ccCCCeEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecCC
Q psy7848 691 ELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSIK 750 (754)
Q Consensus 691 dL~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~~ 750 (754)
++....|.|+|||++.+++|++||.+.|++... .++..++.|+.|++.
T Consensus 96 ~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l------------~~~~~~~~W~~L~~~ 143 (143)
T 3f04_A 96 ELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTV------------DFGHVTEEWRDLQSA 143 (143)
T ss_dssp HHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGC------------CTTSCEEEEEECBCC
T ss_pred hcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHc------------cCCCCcceEEECcCC
Confidence 777899999999999999999999999999854 345677788888763
No 15
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=5.4e-22 Score=188.25 Aligned_cols=125 Identities=32% Similarity=0.540 Sum_probs=108.1
Q ss_pred ccccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCc-ceeeeeeecCCCCCccceeEEEEeec
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK-RKYKTGVKWKTLNPIFNEEFAIETKI 689 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k-~k~KT~v~kkTlNP~wNEtF~F~V~~ 689 (754)
....|+|.+++.|.+..+.|.|.|++|+||++++.+| +||||+|++.++... .+++|+++++|+||+|||+|.|.+..
T Consensus 7 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 85 (142)
T 2dmg_A 7 GSPLGQIQLTIRHSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSL 85 (142)
T ss_dssp SCSSCEEEEEEEEETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCH
T ss_pred CCCcceEEEEEEEeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecH
Confidence 4678999999999999999999999999999999999 999999999876543 48999999999999999999999987
Q ss_pred CccCCCeEEEEEEEccCCCC--CceeEEEEEecCCC--CchhhhHHhhhcC
Q psy7848 690 TELSKQTLVITVWDKDYGKS--NDYLGCLELCCNSK--GDRLRHWVDMMKY 736 (754)
Q Consensus 690 ~dL~~~~L~ItV~D~d~~~~--ddfLG~v~L~l~s~--ge~~~hW~~ll~~ 736 (754)
.++....|.|+|||++.+++ +++||.+.|++... +....+||+|...
T Consensus 86 ~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 86 PEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp HHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred HHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCC
Confidence 77777899999999998764 57999999999863 3355666666543
No 16
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.86 E-value=3.3e-21 Score=182.06 Aligned_cols=131 Identities=27% Similarity=0.381 Sum_probs=113.1
Q ss_pred ccccceeEEeeeccccccceeeccccccccccCCCC-CCCCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEE-ee
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSN-GFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIE-TK 688 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~-G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~-V~ 688 (754)
....|+|.+++.|.+..+.|.|.|++|+||++++.+ |.+||||+|++.++ +..++||+++++|+||+|||+|.|. +.
T Consensus 5 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~-~~~~~kT~v~~~t~nP~wne~f~f~~v~ 83 (138)
T 1ugk_A 5 SSGLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPE-KKHKVKTRVLRKTLDPAFDETFTFYGIP 83 (138)
T ss_dssp CCCCCEEEEEEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETT-TCSEEECCCCSSCSSCEEEEEEEEECCC
T ss_pred CCccEEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecC-CCceEecCcCcCCCCCcEeeEEEEcCcC
Confidence 467899999999999999999999999999999985 89999999999864 3469999999999999999999996 87
Q ss_pred cCccCCCeEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecCCCCC
Q psy7848 689 ITELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSIKPLS 753 (754)
Q Consensus 689 ~~dL~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~~~~~ 753 (754)
..++....|.|+|||++.+++|++||.+.|++.... .. ......|+.|++++.+
T Consensus 84 ~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~----------~~-~~~~~~~~~l~~~~~s 137 (138)
T 1ugk_A 84 YTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIE----------LS-EGKMLMNREIISGPSS 137 (138)
T ss_dssp STTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCC----------CT-TCCEEEEEECBSSSSC
T ss_pred HHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHcc----------CC-CCcchhhhhhhcCCCC
Confidence 777778899999999999999999999999998632 11 2344567888877654
No 17
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.85 E-value=1.9e-21 Score=181.14 Aligned_cols=123 Identities=24% Similarity=0.434 Sum_probs=103.8
Q ss_pred ccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCC-cceeeeeeecCCCCCccceeEEEE-eecC
Q psy7848 613 QHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLH-KRKYKTGVKWKTLNPIFNEEFAIE-TKIT 690 (754)
Q Consensus 613 ~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~-k~k~KT~v~kkTlNP~wNEtF~F~-V~~~ 690 (754)
..|+|.+++.|.+..+.|.|.|++|+||++++.+|.+||||++++.++.. ..++||+++++|+||+|||+|.|. +...
T Consensus 3 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~ 82 (129)
T 2bwq_A 3 LSGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRR 82 (129)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGG
T ss_pred eeEEEEEEEEEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHH
Confidence 57999999999999999999999999999999999999999999987653 359999999999999999999999 4556
Q ss_pred ccCCCeEEEEEEEccCCCC--CceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeec
Q psy7848 691 ELSKQTLVITVWDKDYGKS--NDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLS 748 (754)
Q Consensus 691 dL~~~~L~ItV~D~d~~~~--ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~ 748 (754)
++....|.|+|||++.++. +++||.+.|++... ... ...+||+|+
T Consensus 83 ~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l----------~~~---~~~~W~~Lq 129 (129)
T 2bwq_A 83 EFRERMLEITLWDQARVREEESEFLGEILIELETA----------LLD---DEPHWYKLQ 129 (129)
T ss_dssp GGGGCEEEEEEEEC-------CEEEEEEEEEGGGC----------CCS---SCEEEEECC
T ss_pred HhcCCeEEEEEEECCcCcCcCCceeEEEEEEcccc----------CCC---cCCccEECc
Confidence 7777899999999999887 99999999999853 111 167888875
No 18
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.85 E-value=2.2e-21 Score=183.29 Aligned_cols=129 Identities=23% Similarity=0.395 Sum_probs=112.3
Q ss_pred ccccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCC-cceeeeeeecCCCCCccceeEEEE-ee
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLH-KRKYKTGVKWKTLNPIFNEEFAIE-TK 688 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~-k~k~KT~v~kkTlNP~wNEtF~F~-V~ 688 (754)
....|+|.+++.|.+..+.|.|.|++|+||+.++.+|.+||||+|++.++.. ..++||+++++|+||+|||+|.|. +.
T Consensus 4 ~~~~G~i~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~ 83 (141)
T 1v27_A 4 GSSGGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVH 83 (141)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCC
T ss_pred CCcccEEEEEEEEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCC
Confidence 4578999999999999999999999999999999999999999999987653 359999999999999999999999 56
Q ss_pred cCccCCCeEEEEEEEccCCCC--CceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecCCCC
Q psy7848 689 ITELSKQTLVITVWDKDYGKS--NDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSIKPL 752 (754)
Q Consensus 689 ~~dL~~~~L~ItV~D~d~~~~--ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~~~~ 752 (754)
..++....|.|+|||++.++. +++||.+.|++... ... ...+||.|++...
T Consensus 84 ~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l----------~~~---~~~~W~~L~~~~~ 136 (141)
T 1v27_A 84 RREFRERMLEITLWDQARVREEESEFLGEILIELETA----------LLD---DEPHWYKLQTHDS 136 (141)
T ss_dssp TTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGC----------CCS---SEEEEEECBCCSS
T ss_pred HHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEcccc----------CCC---CCCceEECccccc
Confidence 667778999999999999887 99999999999853 111 2678888887653
No 19
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=3.6e-21 Score=182.47 Aligned_cols=129 Identities=30% Similarity=0.410 Sum_probs=111.5
Q ss_pred ccccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEe-ec
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIET-KI 689 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V-~~ 689 (754)
....|+|.+++.|.+..+.|.|.|++|+||+.++.+|.+||||+|++.++. ..++||+++++|+||+|||+|.|.+ +.
T Consensus 9 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~-~~~~kT~v~~~t~nP~wne~f~f~~~~~ 87 (141)
T 2d8k_A 9 RENLGRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDK-KHKLETKVKRKNLNPHWNETFLFEGFPY 87 (141)
T ss_dssp CCCCCEEEEEEEECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCC-SSEEECCCCTTCSSCCCCEEEEECSCCH
T ss_pred CceeeEEEEEEEEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCC-CccEeCceEcCCCCCccccEEEECccCH
Confidence 356899999999999999999999999999999999999999999997643 3589999999999999999999994 44
Q ss_pred CccCCCeEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecCCCC
Q psy7848 690 TELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSIKPL 752 (754)
Q Consensus 690 ~dL~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~~~~ 752 (754)
.++....|.|+|||++.+++|++||.+.|++.... .+...+.|+.|++..-
T Consensus 88 ~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~------------~~~~~~~W~~L~~~~~ 138 (141)
T 2d8k_A 88 EKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVD------------LTQMQTFWKDLKPSGP 138 (141)
T ss_dssp HHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSC------------TTSCEEEEECCEECCC
T ss_pred HHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhc------------CCCCccEEEECcCCCC
Confidence 55667899999999999999999999999998642 1335678888877643
No 20
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.85 E-value=7.1e-21 Score=180.53 Aligned_cols=128 Identities=40% Similarity=0.738 Sum_probs=114.3
Q ss_pred CCceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeee
Q psy7848 468 DTNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVS 547 (754)
Q Consensus 468 ~~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~ 547 (754)
...+|+|.|++.|+...+.|.|+|++|++|+.++..|.+||||+|++.++......++|+++++|+||+|||+|.|..+.
T Consensus 12 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~ 91 (142)
T 2chd_A 12 ATTLGALEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGIT 91 (142)
T ss_dssp --CCCEEEEEEEEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCC
T ss_pred CCccceEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccC
Confidence 36799999999999999999999999999999999999999999999876555679999999999999999999995466
Q ss_pred ccccCcceEEEEEeeCCCCCC-ccceeeeecCcccCCCCccceEeeccc
Q psy7848 548 ETDLSLQSLHILVLDDDKYGH-DFLGEARFPLNRLRPHISRDLCLNLCK 595 (754)
Q Consensus 548 ~~el~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~~ 595 (754)
..++....|.|.|||+|.+++ +|||++.|+|.++..+....+|+.|+.
T Consensus 92 ~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 92 EEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp HHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred HHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 666656899999999999988 999999999999998888888888763
No 21
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.84 E-value=3.2e-21 Score=186.94 Aligned_cols=124 Identities=18% Similarity=0.213 Sum_probs=107.8
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCC-CCceEEEeeeecCCCCCeeceeEEEeeee
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLT-KTSHRLRTKTCLRTINPEFHEKLTFYSVS 547 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~-~~~~~~rTkvi~~TlNP~WnE~f~F~~I~ 547 (754)
..+|+|+|++.|+...+.|.|+|++|+||+++|.+|.+||||++++.+.. ....++||+++++|+||+|||+|.|. |+
T Consensus 27 ~~~G~l~~sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~-v~ 105 (155)
T 2z0u_A 27 VGATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVS-MS 105 (155)
T ss_dssp -CCEEEEEEEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEE-CC
T ss_pred CCcEEEEEEEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEE-cC
Confidence 57899999999999999999999999999999999999999999998732 22358999999999999999999995 77
Q ss_pred ccccCcceEEEEEeeCCCCCC-ccceeeeecCcccCC-CCccceEeec
Q psy7848 548 ETDLSLQSLHILVLDDDKYGH-DFLGEARFPLNRLRP-HISRDLCLNL 593 (754)
Q Consensus 548 ~~el~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~~-~~~~~~~~~L 593 (754)
..++....|+|+|||+|.+++ +|||++.|+|.++.. ......|+.|
T Consensus 106 ~~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L 153 (155)
T 2z0u_A 106 YPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNL 153 (155)
T ss_dssp HHHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEE
T ss_pred HHHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEc
Confidence 777777899999999999998 999999999999953 4455556555
No 22
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=4.4e-21 Score=183.16 Aligned_cols=129 Identities=26% Similarity=0.357 Sum_probs=110.2
Q ss_pred ccccceeEEeeeccccccceeecccccccccc-CCCC------CCCCceEEEEecCCCCcceeeeeeecCCCCCccceeE
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIP-MDSN------GFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEF 683 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~-~d~~------G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF 683 (754)
....|+|.+++.|.+..+.|.|.|++|+||+. ++.+ |.+||||+|++.++. ..+++|+++++|+||+|||+|
T Consensus 9 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~-~~~~kT~v~~~t~nP~wne~f 87 (147)
T 2enp_A 9 KYQLGMLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQ-KNSKQTGVKRKTQKPVFEERY 87 (147)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCC-SSCEECCCCCSCSSCCCCBCC
T ss_pred CCcceEEEEEEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCC-CcceEeecccCCCCCeEeeeE
Confidence 56799999999999999999999999999998 4554 589999999998653 358899999999999999999
Q ss_pred EEEeecCccCCCeEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecCCCC
Q psy7848 684 AIETKITELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSIKPL 752 (754)
Q Consensus 684 ~F~V~~~dL~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~~~~ 752 (754)
.|.+...++....|.|+|||++.+++|++||.+.|++.... .......|+.|+++..
T Consensus 88 ~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~------------~~~~~~~w~~L~~~~~ 144 (147)
T 2enp_A 88 TFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVD------------LVKGGHWWKALIPSGP 144 (147)
T ss_dssp EECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSC------------TTTCCCEEECCBCCCC
T ss_pred EEEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcC------------CCCCccEEEEeecCCC
Confidence 99998767777899999999999999999999999998642 1223467888887643
No 23
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.84 E-value=1.6e-20 Score=174.90 Aligned_cols=123 Identities=22% Similarity=0.360 Sum_probs=105.2
Q ss_pred ceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeecc
Q psy7848 470 NLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSET 549 (754)
Q Consensus 470 ~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~ 549 (754)
.+|+|.|++.|+...+.|.|+|++|+||+.++..+.+||||++++.++.....+++|+++++|+||+|||+|.|..+...
T Consensus 3 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~ 82 (129)
T 2bwq_A 3 LSGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRR 82 (129)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGG
T ss_pred eeEEEEEEEEEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHH
Confidence 68999999999999999999999999999999999999999999988665668999999999999999999999645556
Q ss_pred ccCcceEEEEEeeCCCCC---CccceeeeecCcccCCCCccceEeec
Q psy7848 550 DLSLQSLHILVLDDDKYG---HDFLGEARFPLNRLRPHISRDLCLNL 593 (754)
Q Consensus 550 el~~~~L~~sV~D~d~~g---~dfLGev~I~L~~L~~~~~~~~~~~L 593 (754)
++....|.|+|||+|.++ +++||++.|+|.++.... ...|++|
T Consensus 83 ~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 83 EFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp GGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred HhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 667789999999999987 599999999999987653 4455544
No 24
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.84 E-value=8.2e-21 Score=179.10 Aligned_cols=126 Identities=25% Similarity=0.375 Sum_probs=105.8
Q ss_pred cceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCc-ceeeeeeecCCCCCccceeEEEE-eecCc
Q psy7848 614 HGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK-RKYKTGVKWKTLNPIFNEEFAIE-TKITE 691 (754)
Q Consensus 614 ~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k-~k~KT~v~kkTlNP~wNEtF~F~-V~~~d 691 (754)
.|.+-+.+.|....+.|.|.|++|+||+. +.+|.+||||+|++.++... .++||+++++|+||+|||+|.|. +...+
T Consensus 6 ~~~~~~~~~~~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~ 84 (134)
T 2b3r_A 6 HGSGAVKLSVSYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKET 84 (134)
T ss_dssp -CCCEEEEEEEEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHH
T ss_pred cccEEEEEEEeecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHH
Confidence 34555666666678999999999999997 78899999999999876533 48999999999999999999999 88777
Q ss_pred cCCCeEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecCCCC
Q psy7848 692 LSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSIKPL 752 (754)
Q Consensus 692 L~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~~~~ 752 (754)
+....|.|+|||++.+++|++||.+.|++... .++..+++||.|.++++
T Consensus 85 l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l------------~~~~~~~~W~~L~~~~~ 133 (134)
T 2b3r_A 85 LRQRELQLSVLSAESLRENFFLGGITLPLKDF------------NLSKETVKWYQLTAATY 133 (134)
T ss_dssp HTTCEEEEEEEECCSSSCCEEEEEEEEEGGGS------------CTTSCEEEEEECBC---
T ss_pred hCcCEEEEEEEECCCCCCCcEEEEEEEEhhhc------------cCCCCcceeEECCCccC
Confidence 77899999999999999999999999999864 23557789999988754
No 25
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=2.1e-20 Score=177.13 Aligned_cols=124 Identities=34% Similarity=0.557 Sum_probs=109.5
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeec
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSE 548 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~ 548 (754)
..+|+|.|++.|.+..+.|.|+|++|++|+.++..+.+||||+|++.++.. ..++|+++++|+||+|||+|.|..++.
T Consensus 10 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~v~~~t~nP~wne~f~f~~~~~ 87 (141)
T 2d8k_A 10 ENLGRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKK--HKLETKVKRKNLNPHWNETFLFEGFPY 87 (141)
T ss_dssp CCCCEEEEEEEECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCS--SEEECCCCTTCSSCCCCEEEEECSCCH
T ss_pred ceeeEEEEEEEEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCC--ccEeCceEcCCCCCccccEEEECccCH
Confidence 469999999999999999999999999999999999999999999987543 688999999999999999999964555
Q ss_pred cccCcceEEEEEeeCCCCCC-ccceeeeecCcccCCCCccceEeecc
Q psy7848 549 TDLSLQSLHILVLDDDKYGH-DFLGEARFPLNRLRPHISRDLCLNLC 594 (754)
Q Consensus 549 ~el~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~ 594 (754)
+++....|.|+|||+|.++. +|||++.|+|.++..+.....|++|.
T Consensus 88 ~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 134 (141)
T 2d8k_A 88 EKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLK 134 (141)
T ss_dssp HHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCE
T ss_pred HHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECc
Confidence 56667899999999999987 99999999999998776566666654
No 26
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.83 E-value=2.1e-21 Score=183.99 Aligned_cols=127 Identities=33% Similarity=0.501 Sum_probs=110.0
Q ss_pred cccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCc----------ceeeeeeecCCCCCccce
Q psy7848 612 WQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK----------RKYKTGVKWKTLNPIFNE 681 (754)
Q Consensus 612 ~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k----------~k~KT~v~kkTlNP~wNE 681 (754)
...|+|.+++.|. .+.|.|.|++|+||+++|.+|.+||||+|++.+..+. .++||+++++|+||+|||
T Consensus 4 ~~~G~i~~~l~y~--~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne 81 (142)
T 1rh8_A 4 PITGEIQLQINYD--LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQ 81 (142)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEE
T ss_pred CcceEEEEEEEEc--CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCC
Confidence 5689999999998 6899999999999999999999999999999865432 368999999999999999
Q ss_pred eEEEE-eecCccCCCeEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecCCCC
Q psy7848 682 EFAIE-TKITELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSIKPL 752 (754)
Q Consensus 682 tF~F~-V~~~dL~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~~~~ 752 (754)
+|.|. +...++....|.|+|||++.+++|++||.+.|++..... +....+||+|.+...
T Consensus 82 ~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~------------~~~~~~W~~L~~~~~ 141 (142)
T 1rh8_A 82 TVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSH------------LDNTPRWYPLKEQTE 141 (142)
T ss_dssp EEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGG------------GTTCCEEEECBCCCC
T ss_pred EEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEecccccc------------CCCCCeEEECCccCC
Confidence 99998 776677788999999999999999999999999986422 234668999987653
No 27
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.83 E-value=1.1e-20 Score=179.15 Aligned_cols=113 Identities=29% Similarity=0.491 Sum_probs=101.9
Q ss_pred ccccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCc-ceeeeeeecCCCCCccceeEEEE-ee
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK-RKYKTGVKWKTLNPIFNEEFAIE-TK 688 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k-~k~KT~v~kkTlNP~wNEtF~F~-V~ 688 (754)
....|+|.+++.|.+..+.|.|.|++|+||++++.+|.+||||+|++.++..+ .++||+++++|+||+|||+|.|. +.
T Consensus 12 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~ 91 (142)
T 2chd_A 12 ATTLGALEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGIT 91 (142)
T ss_dssp --CCCEEEEEEEEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCC
T ss_pred CCccceEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccC
Confidence 56789999999999999999999999999999999999999999999875543 49999999999999999999999 76
Q ss_pred cCccCCCeEEEEEEEccCCCCCceeEEEEEecCCC
Q psy7848 689 ITELSKQTLVITVWDKDYGKSNDYLGCLELCCNSK 723 (754)
Q Consensus 689 ~~dL~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ 723 (754)
..++....|.|+|||++.+++|++||.+.|++...
T Consensus 92 ~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l 126 (142)
T 2chd_A 92 EEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKL 126 (142)
T ss_dssp HHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGC
T ss_pred HHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHc
Confidence 66666689999999999999999999999999864
No 28
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.83 E-value=4.5e-20 Score=174.26 Aligned_cols=124 Identities=29% Similarity=0.574 Sum_probs=109.2
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCC-CCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeee
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIH-GTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVS 547 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~-g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~ 547 (754)
..+|+|.|++.|+...+.|.|+|++|+||+.+|.. +.+||||++++.++.. ..++|+++++|+||+|||+|.|..++
T Consensus 6 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~--~~~kT~v~~~t~nP~wne~f~f~~v~ 83 (138)
T 1ugk_A 6 SGLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKK--HKVKTRVLRKTLDPAFDETFTFYGIP 83 (138)
T ss_dssp CCCCEEEEEEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTC--SEEECCCCSSCSSCEEEEEEEEECCC
T ss_pred CccEEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCC--ceEecCcCcCCCCCcEeeEEEEcCcC
Confidence 57899999999999999999999999999999985 8999999999987543 78999999999999999999996577
Q ss_pred ccccCcceEEEEEeeCCCCCC-ccceeeeecCcccCCCCcc-ceEeecc
Q psy7848 548 ETDLSLQSLHILVLDDDKYGH-DFLGEARFPLNRLRPHISR-DLCLNLC 594 (754)
Q Consensus 548 ~~el~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~~~~~~-~~~~~L~ 594 (754)
..++....|.|+|||+|.++. +|||++.|+|.++...... ..|..|.
T Consensus 84 ~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~ 132 (138)
T 1ugk_A 84 YTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREII 132 (138)
T ss_dssp STTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECB
T ss_pred HHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhh
Confidence 777777899999999999987 9999999999999876444 3455554
No 29
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.83 E-value=2e-20 Score=175.89 Aligned_cols=123 Identities=37% Similarity=0.606 Sum_probs=105.7
Q ss_pred cccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCc-ceeeeeeecCCCCCccceeEEEEeecC
Q psy7848 612 WQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK-RKYKTGVKWKTLNPIFNEEFAIETKIT 690 (754)
Q Consensus 612 ~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k-~k~KT~v~kkTlNP~wNEtF~F~V~~~ 690 (754)
+.+|+|.+++.| ..+.|.|.|++|+||+.++.+|.+||||+|++.++... .+++|+++++++||+|||+|.|.+...
T Consensus 2 ~~~G~l~~~l~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~ 79 (137)
T 3rdl_A 2 EKRGRIYLKAEV--TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPS 79 (137)
T ss_dssp CCCCEEEEEEEE--ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred CcceEEEEEEEE--cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCch
Confidence 468999999999 66999999999999999999999999999999766533 489999999999999999999998765
Q ss_pred ccCCCeEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecCC
Q psy7848 691 ELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSIK 750 (754)
Q Consensus 691 dL~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~~ 750 (754)
++ ...|.|+|||++.+++|++||.+.|++.. +...+ ..+|+.|.+.
T Consensus 80 ~~-~~~l~i~v~d~d~~~~~~~iG~~~i~l~~----------l~~~~---~~~W~~L~~~ 125 (137)
T 3rdl_A 80 DK-DRRLSVEIWDWDRTTRNDFMGSLSFGVSE----------LMKMP---ASGWYKLLNQ 125 (137)
T ss_dssp GG-GCEEEEEEEECCSSSCCEEEEEEEEEHHH----------HHHSC---EEEEEECBCH
T ss_pred hc-CCEEEEEEEECCCCCCCceEEEEEEeHHH----------hccCc---cCceEECcCc
Confidence 55 46899999999999999999999999873 33332 6778877653
No 30
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=3.6e-20 Score=175.67 Aligned_cols=125 Identities=26% Similarity=0.437 Sum_probs=108.0
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeec
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSE 548 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~ 548 (754)
..+|+|+|++.|++..+.|.|+|++|+||+.+|..+ +||||+|++.++.....+++|+++++|+||+|||+|.|. +..
T Consensus 8 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~~ 85 (142)
T 2dmg_A 8 SPLGQIQLTIRHSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFS-VSL 85 (142)
T ss_dssp CSSCEEEEEEEEETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEEC-CCH
T ss_pred CCcceEEEEEEEeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEE-ecH
Confidence 578999999999999999999999999999999889 999999999876555578999999999999999999995 666
Q ss_pred cccCcceEEEEEeeCCCCC--C-ccceeeeecCcccCCCCccceEeecccCCCCCc
Q psy7848 549 TDLSLQSLHILVLDDDKYG--H-DFLGEARFPLNRLRPHISRDLCLNLCKHYPVPR 601 (754)
Q Consensus 549 ~el~~~~L~~sV~D~d~~g--~-dfLGev~I~L~~L~~~~~~~~~~~L~~~~~l~~ 601 (754)
.++....|.|+|||+|.++ + +|||++.|+|.++...... ..|++|.+
T Consensus 86 ~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~------~~W~~L~~ 135 (142)
T 2dmg_A 86 PEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGW------TQWYDLTE 135 (142)
T ss_dssp HHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCB------CCBCCCBC
T ss_pred HHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccc------cceeeccC
Confidence 6666679999999999876 4 6999999999998765433 44555543
No 31
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.83 E-value=1.5e-20 Score=179.71 Aligned_cols=125 Identities=27% Similarity=0.453 Sum_probs=111.0
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCCC-CCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeee
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMD-IHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVS 547 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d-~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~ 547 (754)
+.+|+|.|++.|++..+.|.|+|++|+||+.++ ..+.+||||++++.++.....+++|+++++|+||+|||+|.|. +.
T Consensus 7 ~~~G~l~~sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~ 85 (148)
T 3fdw_A 7 FVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYE-IP 85 (148)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEE-CC
T ss_pred ccceEEEEEEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEE-eC
Confidence 679999999999999999999999999999998 6799999999999987655678999999999999999999995 77
Q ss_pred ccccCcceEEEEEeeCCCCCC-ccceeeeecCcccCCCCccceEeecc
Q psy7848 548 ETDLSLQSLHILVLDDDKYGH-DFLGEARFPLNRLRPHISRDLCLNLC 594 (754)
Q Consensus 548 ~~el~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~ 594 (754)
..++....|.|.|||+|.+++ +|||++.|+|.++..+.....|++|.
T Consensus 86 ~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 133 (148)
T 3fdw_A 86 ESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLH 133 (148)
T ss_dssp STTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECB
T ss_pred hhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECc
Confidence 777777899999999999988 99999999999987665555555554
No 32
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.83 E-value=2.7e-20 Score=175.75 Aligned_cols=126 Identities=21% Similarity=0.353 Sum_probs=109.7
Q ss_pred CCceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeee
Q psy7848 468 DTNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVS 547 (754)
Q Consensus 468 ~~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~ 547 (754)
...+|+|.|++.|++..+.|.|+|++|++|+.++..+.+||||+|++.++.....+++|+++++|+||+|||+|.|..+.
T Consensus 4 ~~~~G~i~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~ 83 (141)
T 1v27_A 4 GSSGGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVH 83 (141)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCC
T ss_pred CCcccEEEEEEEEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCC
Confidence 35789999999999999999999999999999999999999999999876655678999999999999999999996456
Q ss_pred ccccCcceEEEEEeeCCCCC---CccceeeeecCcccCCCCccceEeecc
Q psy7848 548 ETDLSLQSLHILVLDDDKYG---HDFLGEARFPLNRLRPHISRDLCLNLC 594 (754)
Q Consensus 548 ~~el~~~~L~~sV~D~d~~g---~dfLGev~I~L~~L~~~~~~~~~~~L~ 594 (754)
..++....|.|+|||+|.++ ++|||++.|+|.++.... ...|++|.
T Consensus 84 ~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~ 132 (141)
T 1v27_A 84 RREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQ 132 (141)
T ss_dssp TTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECB
T ss_pred HHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECc
Confidence 66777789999999999987 599999999999987643 44555553
No 33
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.83 E-value=6.3e-20 Score=176.41 Aligned_cols=123 Identities=33% Similarity=0.533 Sum_probs=109.9
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeec
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSE 548 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~ 548 (754)
..+|+|.|++.|+...+.|.|+|++|+||+.+|..+.+||||+|++.++.. ..++|+++++|+||+|||+|.|. +..
T Consensus 26 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~v~~~t~nP~wne~f~f~-v~~ 102 (152)
T 1rsy_A 26 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK--KKFETKVHRKTLNPVFNEQFTFK-VPY 102 (152)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCC--SCEECCCCTTCSSCEEEEEEEEC-CCH
T ss_pred CCceEEEEEEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCC--ceEeccccCCCCCCcCcccEEEe-ecH
Confidence 579999999999999999999999999999999999999999999987543 67899999999999999999994 666
Q ss_pred cccCcceEEEEEeeCCCCCC-ccceeeeecCcccCCCCccceEeecc
Q psy7848 549 TDLSLQSLHILVLDDDKYGH-DFLGEARFPLNRLRPHISRDLCLNLC 594 (754)
Q Consensus 549 ~el~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~ 594 (754)
.++....|.|+|||+|.+++ +|||++.|+|.++..+.....|+.|.
T Consensus 103 ~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 149 (152)
T 1rsy_A 103 SELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 149 (152)
T ss_dssp HHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECB
T ss_pred HHcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECC
Confidence 66667899999999999987 99999999999998776666676664
No 34
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.82 E-value=4.6e-20 Score=175.13 Aligned_cols=123 Identities=33% Similarity=0.533 Sum_probs=110.7
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeec
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSE 548 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~ 548 (754)
..+|+|.|++.|+...+.|.|+|++|++|+.++..+.+||||+|++.++.. .+++|+++++|+||+|||+|.|. +..
T Consensus 18 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~--~~~kT~v~~~t~nP~wne~f~f~-v~~ 94 (143)
T 3f04_A 18 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK--KKFETKVHRKTLNPVFNEQFTFK-VPY 94 (143)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCS--CCEECCCCCSCSSCEEEEEEEEC-CCH
T ss_pred cCeEEEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCC--ccEECccCcCCCCCcCcCeEEEe-ecH
Confidence 579999999999999999999999999999999889999999999987554 58899999999999999999994 666
Q ss_pred cccCcceEEEEEeeCCCCCC-ccceeeeecCcccCCCCccceEeecc
Q psy7848 549 TDLSLQSLHILVLDDDKYGH-DFLGEARFPLNRLRPHISRDLCLNLC 594 (754)
Q Consensus 549 ~el~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~ 594 (754)
.++....|.|+|||+|.++. +|||++.|+|.++..+.....|++|.
T Consensus 95 ~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 95 SELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp HHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred hhcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 66777899999999999987 99999999999998877777777664
No 35
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.82 E-value=1.9e-19 Score=170.53 Aligned_cols=121 Identities=19% Similarity=0.245 Sum_probs=106.3
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeec
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSE 548 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~ 548 (754)
..+|+|+|++.|+...+.|.|+|++|+ .+|..|.+||||+|++.++.. ...++|+++++|+||+|||+|.|. +..
T Consensus 10 ~~~G~l~~sl~y~~~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~-~~~~kT~v~~~tlnP~wnE~f~f~-v~~ 84 (138)
T 1wfm_A 10 NQAPKLHYCLDYDCQKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTG-SVEAQTALKKRQLHTTWEEGLVLP-LAE 84 (138)
T ss_dssp SSCCEEEEEEEEETTTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTE-EEEEECCCCCCCSSEECSSCEEEE-CCT
T ss_pred CcceEEEEEEEEeCCCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCC-cccEecccCcCCCCCcCCceEEEE-ecH
Confidence 468999999999999999999999999 367889999999999986422 357899999999999999999995 777
Q ss_pred cccCcceEEEEEeeCCCCCC-ccceeeeecCcccCCCCccceEeecc
Q psy7848 549 TDLSLQSLHILVLDDDKYGH-DFLGEARFPLNRLRPHISRDLCLNLC 594 (754)
Q Consensus 549 ~el~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~ 594 (754)
.++....|+|.|||+|.+++ +|||++.|+|.++........|..|.
T Consensus 85 ~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~ 131 (138)
T 1wfm_A 85 EELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELK 131 (138)
T ss_dssp TSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECC
T ss_pred HHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCc
Confidence 77777899999999999988 99999999999997666666777665
No 36
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.82 E-value=8e-20 Score=174.94 Aligned_cols=124 Identities=33% Similarity=0.566 Sum_probs=105.8
Q ss_pred ccccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCc-ceeeeeeecCCCCCccceeEEEEeec
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK-RKYKTGVKWKTLNPIFNEEFAIETKI 689 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k-~k~KT~v~kkTlNP~wNEtF~F~V~~ 689 (754)
....|+|.+++.|. .+.|.|.|++|+||++++.+|.+||||+|++.++... .++||+++++|+||+|||+|.|.+..
T Consensus 16 ~~~~G~l~~~l~~~--~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 93 (149)
T 1a25_A 16 MERRGRIYIQAHID--REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKE 93 (149)
T ss_dssp -CTTCEEEEEEEES--SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCS
T ss_pred CCcceEEEEEEEec--CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEecc
Confidence 45689999999994 5789999999999999999999999999999875443 48999999999999999999999976
Q ss_pred CccCCCeEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecCC
Q psy7848 690 TELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSIK 750 (754)
Q Consensus 690 ~dL~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~~ 750 (754)
.++ ...|.|+|||++.+++|++||.+.|++.. +... ..++||.|.+.
T Consensus 94 ~~~-~~~L~i~V~d~d~~~~~~~iG~~~i~l~~----------l~~~---~~~~W~~L~~~ 140 (149)
T 1a25_A 94 SDK-DRRLSVEIWDWDLTSRNDFMGSLSFGISE----------LQKA---GVDGWFKLLSQ 140 (149)
T ss_dssp GGG-GCEEEEEEEECCSSSCCEEEEEEEEEHHH----------HTTC---CEEEEEECBCH
T ss_pred ccC-CCEEEEEEEECCCCCCCCEEEEEEEEHHH----------hCcC---ccCCeEEccCC
Confidence 554 36899999999999999999999999873 2322 37788888764
No 37
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.81 E-value=1.2e-19 Score=173.24 Aligned_cols=123 Identities=24% Similarity=0.353 Sum_probs=105.5
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCC-CCC------CCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeE
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAM-DIH------GTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKL 541 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~-d~~------g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f 541 (754)
..+|+|.|++.|++..+.|.|+|++|+||+.. |.+ +.+||||+|++.++.. .+++|+++++++||+|||+|
T Consensus 10 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~--~~~kT~v~~~t~nP~wne~f 87 (147)
T 2enp_A 10 YQLGMLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQK--NSKQTGVKRKTQKPVFEERY 87 (147)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCS--SCEECCCCCSCSSCCCCBCC
T ss_pred CcceEEEEEEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCC--cceEeecccCCCCCeEeeeE
Confidence 57999999999999999999999999999984 544 5899999999987543 57899999999999999999
Q ss_pred EEeeeeccccCcceEEEEEeeCCCCCC-ccceeeeecCcccCCCCccceEeecc
Q psy7848 542 TFYSVSETDLSLQSLHILVLDDDKYGH-DFLGEARFPLNRLRPHISRDLCLNLC 594 (754)
Q Consensus 542 ~F~~I~~~el~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~ 594 (754)
.|. +...++....|.|.|||+|.+++ +|||++.|+|.++........|..|.
T Consensus 88 ~f~-v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~ 140 (147)
T 2enp_A 88 TFE-IPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALI 140 (147)
T ss_dssp EEC-CCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCB
T ss_pred EEE-eChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEee
Confidence 995 66666666799999999999987 99999999999997765554555543
No 38
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.81 E-value=3.5e-20 Score=174.21 Aligned_cols=111 Identities=32% Similarity=0.505 Sum_probs=101.1
Q ss_pred eeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeeccc
Q psy7848 471 LGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSETD 550 (754)
Q Consensus 471 ~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~e 550 (754)
+|+|.|++.|++..+.|.|+|++|+||+.+|..|.+||||++++.++.....+++|+++.+|+||+|||+|.|. +...+
T Consensus 2 ~G~l~~sl~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~-v~~~~ 80 (138)
T 3n5a_A 2 RGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFD-IPTEK 80 (138)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEE-CCGGG
T ss_pred CcEEEEEEEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEE-CChhh
Confidence 79999999999999999999999999999999999999999999875544568999999999999999999995 77777
Q ss_pred cCcceEEEEEeeCCCCCC-ccceeeeecCcccC
Q psy7848 551 LSLQSLHILVLDDDKYGH-DFLGEARFPLNRLR 582 (754)
Q Consensus 551 l~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~ 582 (754)
+....|.|+|||+|.++. +|||++.|+|.++.
T Consensus 81 l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 81 LRETTIIITVMDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp GGGEEEEEEEEECCSSSCCEEEEEEEESSSSCH
T ss_pred cCceEEEEEEEECCCCCCCcEEEEEEEccccCC
Confidence 777899999999999987 99999999999753
No 39
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.81 E-value=6.1e-20 Score=180.35 Aligned_cols=108 Identities=22% Similarity=0.358 Sum_probs=93.8
Q ss_pred ccccceeEEeeeccccccceeeccccccccccCCC-CCCCCceEEEEecCCCCc-ceeeeeeecCCCCCccceeEEEEee
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDS-NGFSDPFIKLYLKPDLHK-RKYKTGVKWKTLNPIFNEEFAIETK 688 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~-~G~sDPYVKV~L~~~~~k-~k~KT~v~kkTlNP~wNEtF~F~V~ 688 (754)
....|+|.+++.| ..+.|.|.|++|+||+++|. +|.+||||+|++.++... .++||+++++|+||+|||+|.|.+.
T Consensus 15 ~~~~G~l~~~l~y--~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 92 (171)
T 2q3x_A 15 TPAMGDIQIGMED--KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDES 92 (171)
T ss_dssp --CCCEEEEEEEE--ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSC
T ss_pred CCCccEEEEEEEE--CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEec
Confidence 3567999999999 67899999999999999995 799999999999875433 3889999999999999999999985
Q ss_pred cCccCCCeEEEEEE-EccCCCCCceeEEEEEecCCC
Q psy7848 689 ITELSKQTLVITVW-DKDYGKSNDYLGCLELCCNSK 723 (754)
Q Consensus 689 ~~dL~~~~L~ItV~-D~d~~~~ddfLG~v~L~l~s~ 723 (754)
. ....|.|+|| |+|.+++|++||.+.|++...
T Consensus 93 ~---~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l 125 (171)
T 2q3x_A 93 P---QGKVLQVIVWGDYGRMDHKCFMGVAQILLEEL 125 (171)
T ss_dssp C---TTEEEEEEEEEECSTTCSSEEEEEEEECGGGS
T ss_pred C---CCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHc
Confidence 3 3589999999 999999999999999999864
No 40
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.80 E-value=5.1e-20 Score=174.41 Aligned_cols=124 Identities=30% Similarity=0.455 Sum_probs=106.1
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCC---------ceEEEeeeecCCCCCeece
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKT---------SHRLRTKTCLRTINPEFHE 539 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~---------~~~~rTkvi~~TlNP~WnE 539 (754)
..+|+|.|++.|+ .+.|.|+|++|+||+.+|..|.+||||+|++.+.... ..+++|+++++|+||+|||
T Consensus 4 ~~~G~i~~~l~y~--~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne 81 (142)
T 1rh8_A 4 PITGEIQLQINYD--LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQ 81 (142)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEE
T ss_pred CcceEEEEEEEEc--CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCC
Confidence 5799999999998 7899999999999999999999999999999864321 2357899999999999999
Q ss_pred eEEEeeeeccccCcceEEEEEeeCCCCCC-ccceeeeecCcccCCCCccceEeecc
Q psy7848 540 KLTFYSVSETDLSLQSLHILVLDDDKYGH-DFLGEARFPLNRLRPHISRDLCLNLC 594 (754)
Q Consensus 540 ~f~F~~I~~~el~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~ 594 (754)
+|.|..+..+++....|.|+|||+|.++. +|||++.|+|.++........|++|.
T Consensus 82 ~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~ 137 (142)
T 1rh8_A 82 TVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLK 137 (142)
T ss_dssp EEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECB
T ss_pred EEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECC
Confidence 99995466666677899999999999988 99999999999987654555565554
No 41
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.80 E-value=2.8e-19 Score=168.52 Aligned_cols=123 Identities=24% Similarity=0.344 Sum_probs=105.4
Q ss_pred eeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeeccc
Q psy7848 471 LGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSETD 550 (754)
Q Consensus 471 ~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~e 550 (754)
.|.+-+.+.|+...+.|.|+|++|+||+. +..+.+||||+|++.++.....+++|+++++|+||+|||+|.|..+...+
T Consensus 6 ~~~~~~~~~~~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~ 84 (134)
T 2b3r_A 6 HGSGAVKLSVSYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKET 84 (134)
T ss_dssp -CCCEEEEEEEEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHH
T ss_pred cccEEEEEEEeecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHH
Confidence 45566777777789999999999999997 77899999999999886555678999999999999999999994366667
Q ss_pred cCcceEEEEEeeCCCCCC-ccceeeeecCcccCCCCccceEeecc
Q psy7848 551 LSLQSLHILVLDDDKYGH-DFLGEARFPLNRLRPHISRDLCLNLC 594 (754)
Q Consensus 551 l~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~ 594 (754)
+....|.|+|||+|.+++ +|||++.|+|.++..+.....|++|.
T Consensus 85 l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~ 129 (134)
T 2b3r_A 85 LRQRELQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLT 129 (134)
T ss_dssp HTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECB
T ss_pred hCcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECC
Confidence 777899999999999987 99999999999998776666666664
No 42
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.80 E-value=7.8e-19 Score=169.85 Aligned_cols=112 Identities=31% Similarity=0.476 Sum_probs=101.3
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeec
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSE 548 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~ 548 (754)
..+|+|.|+|.|++..+.|.|+|++|+||+.+|..|.+||||+|++.++.....+++|+++.+|+||+|||+|.|. +..
T Consensus 9 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~~ 87 (159)
T 1tjx_A 9 EKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFE-VPF 87 (159)
T ss_dssp GCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEE-CCG
T ss_pred CcCCeEEEEEEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEE-cCH
Confidence 4699999999999999999999999999999999999999999999865433468899999999999999999995 776
Q ss_pred cccCcceEEEEEeeCCCCCC-ccceeeeecCccc
Q psy7848 549 TDLSLQSLHILVLDDDKYGH-DFLGEARFPLNRL 581 (754)
Q Consensus 549 ~el~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L 581 (754)
.++....|.|.|||+|.++. +|||++.|+|..+
T Consensus 88 ~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~ 121 (159)
T 1tjx_A 88 EQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNST 121 (159)
T ss_dssp GGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCC
T ss_pred HHhCCcEEEEEEEECCCCCCCceEEEEEECCCCC
Confidence 77777899999999999987 9999999999865
No 43
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.79 E-value=1.6e-18 Score=169.04 Aligned_cols=114 Identities=32% Similarity=0.458 Sum_probs=102.0
Q ss_pred CCceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeee
Q psy7848 468 DTNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVS 547 (754)
Q Consensus 468 ~~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~ 547 (754)
...+|+|.|++.|....+.|.|+|++|+||+.+|.+|.+||||+|++.++.....+++|+++++|+||+|||+|.|. +.
T Consensus 20 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~ 98 (166)
T 2cm5_A 20 IEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYD-IK 98 (166)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEE-CC
T ss_pred cCccceEEEEEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEE-cc
Confidence 36799999999999999999999999999999999999999999999875544578999999999999999999995 66
Q ss_pred ccccCcceEEEEEeeCCCCCC-ccceeeeecCcccC
Q psy7848 548 ETDLSLQSLHILVLDDDKYGH-DFLGEARFPLNRLR 582 (754)
Q Consensus 548 ~~el~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~ 582 (754)
..++....|.|.|||+|.++. +|||++.|+|.++.
T Consensus 99 ~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 99 HSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp GGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCH
T ss_pred hHhcCCCEEEEEEEECCCCCCCcEEEeEEEecccCC
Confidence 666777899999999999987 99999999999763
No 44
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.79 E-value=3.7e-19 Score=171.27 Aligned_cols=125 Identities=24% Similarity=0.350 Sum_probs=104.0
Q ss_pred CCCceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeee
Q psy7848 467 ADTNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSV 546 (754)
Q Consensus 467 ~~~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I 546 (754)
.....|+|.|+|.|+...+.|.|+|++|+||+.+| .+.+||||+|++.++.....+++|+++.+|+||+|||+|.|. +
T Consensus 9 ~~~~~G~~~lsL~y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v 86 (153)
T 3fbk_A 9 SHKVQGAGQLRLSIDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFP-V 86 (153)
T ss_dssp ----CCCCEEEEEEEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEE-C
T ss_pred ccCCCCEEEEEEEEECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEe-c
Confidence 33679999999999999999999999999999999 699999999999886655678999999999999999999995 5
Q ss_pred eccccCcceEEEEEeeCCCCC--CccceeeeecCcccCC-CCccceEeecc
Q psy7848 547 SETDLSLQSLHILVLDDDKYG--HDFLGEARFPLNRLRP-HISRDLCLNLC 594 (754)
Q Consensus 547 ~~~el~~~~L~~sV~D~d~~g--~dfLGev~I~L~~L~~-~~~~~~~~~L~ 594 (754)
...++. ..|.|+|||+|.++ ++|||++.|+|.+|.. +.....|+.|.
T Consensus 87 ~~~~~~-~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~ 136 (153)
T 3fbk_A 87 QEEDDQ-KRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLL 136 (153)
T ss_dssp CGGGTT-SEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECB
T ss_pred ccHHhC-CEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECC
Confidence 555565 45999999999975 4899999999999974 44555555553
No 45
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.79 E-value=2.2e-19 Score=172.49 Aligned_cols=111 Identities=28% Similarity=0.407 Sum_probs=94.1
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeec
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSE 548 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~ 548 (754)
..+|+|.|++.|++..+.|.|+|++|+||+.+|..+.+||||+|++.++.....+++|+++++|+||+|||+|.|. +..
T Consensus 14 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~~ 92 (153)
T 1w15_A 14 SGRGELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFD-IPC 92 (153)
T ss_dssp --CCEEEEEEEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEE-CCS
T ss_pred ccccEEEEEEEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEE-CCH
Confidence 5799999999999999999999999999999999999999999999875443347899999999999999999995 777
Q ss_pred cccCcceEEEEEeeCCCCCC-ccceeeeecCcc
Q psy7848 549 TDLSLQSLHILVLDDDKYGH-DFLGEARFPLNR 580 (754)
Q Consensus 549 ~el~~~~L~~sV~D~d~~g~-dfLGev~I~L~~ 580 (754)
.++....|.|.|||+|.++. +|||++.|+|.+
T Consensus 93 ~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 93 ESLEEISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp SSSTTEEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred HHhCceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 77777899999999999987 999999999987
No 46
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.78 E-value=8.5e-19 Score=164.66 Aligned_cols=121 Identities=34% Similarity=0.476 Sum_probs=103.6
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeec
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSE 548 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~ 548 (754)
+.+|+|.+++.| ..+.|.|+|++|++|+.++..+.+||||++++.++......++|+++.+++||+|||+|.|. +..
T Consensus 2 ~~~G~l~~~l~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~-~~~ 78 (137)
T 3rdl_A 2 EKRGRIYLKAEV--TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFK-LKP 78 (137)
T ss_dssp CCCCEEEEEEEE--ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEE-CCG
T ss_pred CcceEEEEEEEE--cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEE-cCc
Confidence 468999999999 67999999999999999999999999999999876655678999999999999999999995 444
Q ss_pred cccCcceEEEEEeeCCCCCC-ccceeeeecCcccCCCCccceEeecc
Q psy7848 549 TDLSLQSLHILVLDDDKYGH-DFLGEARFPLNRLRPHISRDLCLNLC 594 (754)
Q Consensus 549 ~el~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~ 594 (754)
.++ ...|.|.|||+|.+++ ++||++.|+|.+|.... ...|+.|.
T Consensus 79 ~~~-~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~ 123 (137)
T 3rdl_A 79 SDK-DRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP-ASGWYKLL 123 (137)
T ss_dssp GGG-GCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC-EEEEEECB
T ss_pred hhc-CCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc-cCceEECc
Confidence 434 3689999999999987 99999999999986543 44455553
No 47
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.78 E-value=8.5e-19 Score=184.89 Aligned_cols=123 Identities=35% Similarity=0.623 Sum_probs=108.8
Q ss_pred cccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEeecCc
Q psy7848 612 WQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKITE 691 (754)
Q Consensus 612 ~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V~~~d 691 (754)
...|+|.+++.|.+..+.|.|.|++|+||+++|.+|.+||||+|++.++. ..+++|+++++|+||+|||+|.|.+...+
T Consensus 3 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~-~~~~~T~~~~~~~nP~wne~f~f~v~~~~ 81 (284)
T 2r83_A 3 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDK-KKKFETKVHRKTLNPVFNEQFTFKVPYSE 81 (284)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCT-TSCEECCCCCSCSSCEEEEEEEECCCGGG
T ss_pred cceeEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCC-CceEeCCcccCCCCCeeCceEEEEechHH
Confidence 46899999999999999999999999999999999999999999997653 34789999999999999999999998878
Q ss_pred cCCCeEEEEEEEccCCCCCceeEEEEEecCCC--CchhhhHHhhhc
Q psy7848 692 LSKQTLVITVWDKDYGKSNDYLGCLELCCNSK--GDRLRHWVDMMK 735 (754)
Q Consensus 692 L~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s~--ge~~~hW~~ll~ 735 (754)
+....|.|+|||++.++.|++||.+.|++... +....+|++|..
T Consensus 82 ~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~ 127 (284)
T 2r83_A 82 LAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 127 (284)
T ss_dssp CTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred hCcCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeec
Confidence 88899999999999999999999999999873 334455665543
No 48
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.78 E-value=2e-18 Score=165.20 Aligned_cols=120 Identities=32% Similarity=0.471 Sum_probs=102.9
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeec
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSE 548 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~ 548 (754)
..+|+|.+++.| ..+.|.|+|++|++|+.+|..+.+||||+|++.++.....+++|+++++|+||+|||+|.|. +..
T Consensus 17 ~~~G~l~~~l~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~~ 93 (149)
T 1a25_A 17 ERRGRIYIQAHI--DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQ-LKE 93 (149)
T ss_dssp CTTCEEEEEEEE--SSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEE-CCS
T ss_pred CcceEEEEEEEe--cCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEE-ecc
Confidence 568999999999 46899999999999999999999999999999876555678999999999999999999995 544
Q ss_pred cccCcceEEEEEeeCCCCCC-ccceeeeecCcccCCCCccceEeec
Q psy7848 549 TDLSLQSLHILVLDDDKYGH-DFLGEARFPLNRLRPHISRDLCLNL 593 (754)
Q Consensus 549 ~el~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L 593 (754)
.++ ...|.|+|||+|.++. +|||++.|+|.+|... ....|+.|
T Consensus 94 ~~~-~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L 137 (149)
T 1a25_A 94 SDK-DRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKL 137 (149)
T ss_dssp GGG-GCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEEC
T ss_pred ccC-CCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEc
Confidence 444 3689999999999987 9999999999999765 34445544
No 49
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.77 E-value=2.2e-18 Score=169.29 Aligned_cols=120 Identities=23% Similarity=0.319 Sum_probs=101.9
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCCCC-CCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeee
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDI-HGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVS 547 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~-~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~ 547 (754)
..+|+|.|++.| ..+.|.|+|++|+||+.+|. .+.+||||+|++.++.....+++|+++++|+||+|||+|.|. +.
T Consensus 16 ~~~G~l~~~l~y--~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~ 92 (171)
T 2q3x_A 16 PAMGDIQIGMED--KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFD-ES 92 (171)
T ss_dssp -CCCEEEEEEEE--ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECS-SC
T ss_pred CCccEEEEEEEE--CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEE-ec
Confidence 578999999999 68999999999999999995 799999999999875433458899999999999999999995 43
Q ss_pred ccccCcceEEEEEe-eCCCCCC-ccceeeeecCcccCCCCccceEeecc
Q psy7848 548 ETDLSLQSLHILVL-DDDKYGH-DFLGEARFPLNRLRPHISRDLCLNLC 594 (754)
Q Consensus 548 ~~el~~~~L~~sV~-D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~ 594 (754)
. ....|.|.|| |+|.++. +|||++.|+|.++..+.....|+.|.
T Consensus 93 ~---~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~ 138 (171)
T 2q3x_A 93 P---QGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLF 138 (171)
T ss_dssp C---TTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECB
T ss_pred C---CCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECC
Confidence 2 3589999999 9999987 99999999999998766666666664
No 50
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.75 E-value=1.8e-18 Score=184.16 Aligned_cols=124 Identities=35% Similarity=0.604 Sum_probs=108.6
Q ss_pred ccccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEeecC
Q psy7848 611 CWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKIT 690 (754)
Q Consensus 611 ~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V~~~ 690 (754)
....|+|.++|.|.+..+.|.|.|++|+||+++|.+|.+||||+|++.++ +..+++|+++++|+||+|||+|.|.+...
T Consensus 3 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~-~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 81 (296)
T 1dqv_A 3 GAPCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPD-RKKKFQTKVHRKTLNPIFNETFQFSVPLA 81 (296)
T ss_dssp CCSSCEEEEEEECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTS-TTSCEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred CCeeeEEEEEEEEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcC-CCeeEeCCccCCCCCCcEeeEEEEEecHH
Confidence 35789999999999999999999999999999999999999999999765 34688999999999999999999999888
Q ss_pred ccCCCeEEEEEEEccCCCCCceeEEEEEe-c---CCCCchhhhHHhhhc
Q psy7848 691 ELSKQTLVITVWDKDYGKSNDYLGCLELC-C---NSKGDRLRHWVDMMK 735 (754)
Q Consensus 691 dL~~~~L~ItV~D~d~~~~ddfLG~v~L~-l---~s~ge~~~hW~~ll~ 735 (754)
++....|.|+|||+|.+++|++||.+.|+ + ...+....+|++|..
T Consensus 82 ~l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~ 130 (296)
T 1dqv_A 82 ELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILE 130 (296)
T ss_dssp GGSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBC
T ss_pred HhcCCEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeecccc
Confidence 88888999999999999999999999995 2 223445566776653
No 51
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=1.4e-17 Score=157.20 Aligned_cols=128 Identities=24% Similarity=0.325 Sum_probs=103.5
Q ss_pred cCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeecccc-CcceEEEEEe
Q psy7848 483 TTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSETDL-SLQSLHILVL 561 (754)
Q Consensus 483 ~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el-~~~~L~~sV~ 561 (754)
..+.|.|+|++|++|+.++. +.+||||++++.+ .+++|+++++++||+|||+|.|. +...++ ....|.|.||
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~-v~~~~~~~~~~l~i~V~ 77 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKD-----EKKKTKKVDNELNPVWNEILEFD-LRGIPLDFSSSLGIIVK 77 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSS-----CEEECCCCCSCSSCEEEEEEEEE-CSSCCCCTTCEEEEEEE
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECC-----EeEEeeeecCCCCCccCcEEEEE-ecccccCCCCEEEEEEE
Confidence 45789999999999999998 9999999999964 57999999999999999999995 443322 3589999999
Q ss_pred eCCCCCC-ccceeeeecCcccCCCCccceEeecccCCCCCccccccccccccccceeEEeeecccc
Q psy7848 562 DDDKYGH-DFLGEARFPLNRLRPHISRDLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCFSTK 626 (754)
Q Consensus 562 D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y~p~ 626 (754)
|+|.++. +|||++.|+|.+|..+.....|+.+.. +... ......|+|+|++.|.|.
T Consensus 78 d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~---l~~~------~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 78 DFETIGQNKLIGTATVALKDLTGDQSRSLPYKLIS---LLNE------KGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp ETTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEE---EECT------TCCEEEEEEEEEEEECCC
T ss_pred ECCCCCCCceEEEEEEEHHHhccCCCceeEEeeee---ccCC------CCCCCCCEEEEEEEEECC
Confidence 9999987 999999999999987766667766321 1111 012356999999999875
No 52
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.73 E-value=1.8e-18 Score=162.14 Aligned_cols=109 Identities=28% Similarity=0.372 Sum_probs=95.7
Q ss_pred eeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEeecCccCCCeEEE
Q psy7848 620 TLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKITELSKQTLVI 699 (754)
Q Consensus 620 sL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V~~~dL~~~~L~I 699 (754)
++.|.+..+.|.|.|++|+||++++.+|.+||||++++. ..+++|+++++|+||+|||+|.|.+.. . ...|.|
T Consensus 5 s~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~----~~~~kT~~~~~t~nP~wne~f~f~~~~--~-~~~l~i 77 (133)
T 2ep6_A 5 SSGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELG----NDRLQTHTVYKNLNPEWNKVFTFPIKD--I-HDVLEV 77 (133)
T ss_dssp CCCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEET----TEEEECCCCSSCSSCCCCEEEEEEESC--T-TCEEEE
T ss_pred cccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEEC----CEEEEeeeecCCCCCccccEEEEEecC--C-CCEEEE
Confidence 467888889999999999999999999999999999994 347899999999999999999999963 2 478999
Q ss_pred EEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhc
Q psy7848 700 TVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMK 735 (754)
Q Consensus 700 tV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~ 735 (754)
+|||++.+++|++||.+.|++.....+..+|+.|..
T Consensus 78 ~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~ 113 (133)
T 2ep6_A 78 TVFDEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKN 113 (133)
T ss_dssp EEEEEETTEEEEECCBCEEEGGGCCSSCCEECCCBC
T ss_pred EEEECCCCCCCCeeEEEEEEHHHccCCCceEEEeec
Confidence 999999999999999999999986655567777664
No 53
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.73 E-value=2.8e-17 Score=157.60 Aligned_cols=134 Identities=24% Similarity=0.394 Sum_probs=96.2
Q ss_pred CcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCC-CceEEEeeeecCCCCCeeceeEEEeeeeccccCcceEEEEE
Q psy7848 482 STTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTK-TSHRLRTKTCLRTINPEFHEKLTFYSVSETDLSLQSLHILV 560 (754)
Q Consensus 482 ~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~-~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el~~~~L~~sV 560 (754)
...+.|.|+|++|++|+.+|..+.+||||++++.+... ....++|+++.+|+||+|||+|.|. +... ...|.|+|
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~~~---~~~l~~~V 92 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFR-VHPQ---QHRLLFEV 92 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEE-ECTT---TCEEEEEE
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEE-ecCC---CCEEEEEE
Confidence 34578999999999999999889999999999985321 1368899999999999999999995 4432 47899999
Q ss_pred eeCCCCCC-ccceeeeecCcccCCCCccceEeec-ccCCCCCccccccccccccccceeEEeeeccc
Q psy7848 561 LDDDKYGH-DFLGEARFPLNRLRPHISRDLCLNL-CKHYPVPREEEVWGEEECWQHGKIFLTLCFST 625 (754)
Q Consensus 561 ~D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L-~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y~p 625 (754)
||+|.+++ +|||++.|+|.++........ ..+ ..|++|.... ......|+|+|++.|.|
T Consensus 93 ~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~-~~~~~~w~~L~~~~-----~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 93 FDENRLTRDDFLGQVDVPLYPLPTENPRLE-RPYTFKDFVLHPRS-----HKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp EECCSSSCCEEEEEEEEECCSCCBCCTTSC-CCCCCEEEECBCSS-----TTCCCCSEEEEEEEECC
T ss_pred EECCCCcCCCeeEEEEEEHHHcccCCCccc-cccccccccccccc-----CCCCcceEEEEEEEEeC
Confidence 99999987 999999999999976644210 011 1344443221 11356899999999976
No 54
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=9.2e-18 Score=158.48 Aligned_cols=112 Identities=20% Similarity=0.200 Sum_probs=93.7
Q ss_pred ccceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEeecCcc-CCCeEEEEEEEcc
Q psy7848 627 KRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKITEL-SKQTLVITVWDKD 705 (754)
Q Consensus 627 ~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V~~~dL-~~~~L~ItV~D~d 705 (754)
.+.|.|.|++|+||+.++. |.+||||++++. ..++||+++++++||+|||+|.|.+...++ ....|.|+|||++
T Consensus 6 ~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~----~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d 80 (140)
T 2dmh_A 6 SGMLRVIVESASNIPKTKF-GKPDPIVSVIFK----DEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFE 80 (140)
T ss_dssp CCEEEEEEEEEESCCCCSS-SCCCEEEEEECS----SCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETT
T ss_pred CcEEEEEEEEeeCCCCCCC-CCCCeEEEEEEC----CEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECC
Confidence 4789999999999999998 999999999994 347999999999999999999999875444 3589999999999
Q ss_pred CCCCCceeEEEEEecCCC--CchhhhHHh---hhcCCCcceee
Q psy7848 706 YGKSNDYLGCLELCCNSK--GDRLRHWVD---MMKYPDHKHEG 743 (754)
Q Consensus 706 ~~~~ddfLG~v~L~l~s~--ge~~~hW~~---ll~~P~~~ie~ 743 (754)
.++.|++||.+.|++... +....+|++ |+...+....+
T Consensus 81 ~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G 123 (140)
T 2dmh_A 81 TIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGA 123 (140)
T ss_dssp CSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEE
T ss_pred CCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCC
Confidence 999999999999999873 445577877 66554443333
No 55
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.72 E-value=1.1e-17 Score=156.75 Aligned_cols=126 Identities=31% Similarity=0.483 Sum_probs=102.2
Q ss_pred EEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeeccccCcceEE
Q psy7848 478 VTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSETDLSLQSLH 557 (754)
Q Consensus 478 l~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el~~~~L~ 557 (754)
+.|....+.|.|+|++|++|+.+|..|.+||||++++.+ ..++|+++++++||+|||+|.|. +.. . ...|.
T Consensus 6 ~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~-~~~--~-~~~l~ 76 (133)
T 2ep6_A 6 SGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGN-----DRLQTHTVYKNLNPEWNKVFTFP-IKD--I-HDVLE 76 (133)
T ss_dssp CCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT-----EEEECCCCSSCSSCCCCEEEEEE-ESC--T-TCEEE
T ss_pred ccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC-----EEEEeeeecCCCCCccccEEEEE-ecC--C-CCEEE
Confidence 456677899999999999999999999999999999964 57899999999999999999995 332 2 37899
Q ss_pred EEEeeCCCCCC-ccceeeeecCcccCCCCccceEeecccCCCCCccccccccccccccceeEEeeeccc
Q psy7848 558 ILVLDDDKYGH-DFLGEARFPLNRLRPHISRDLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCFST 625 (754)
Q Consensus 558 ~sV~D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y~p 625 (754)
|+|||+|.++. +|||++.|+|.++..+. . .|++|..... .....|+|+|.+.|..
T Consensus 77 i~V~d~d~~~~~~~lG~~~i~l~~l~~~~--~------~w~~L~~~~~-----~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 77 VTVFDEDGDKPPDFLGKVAIPLLSIRDGQ--P------NCYVLKNKDL-----EQAFKGVIYLEMDLIY 132 (133)
T ss_dssp EEEEEEETTEEEEECCBCEEEGGGCCSSC--C------EECCCBCSCT-----TSCCSSEEEEEEEEEE
T ss_pred EEEEECCCCCCCCeeEEEEEEHHHccCCC--c------eEEEeecCCC-----CCccceEEEEEEEEEe
Confidence 99999999987 99999999999996542 2 3444433211 1357899999998753
No 56
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.72 E-value=1.1e-17 Score=162.42 Aligned_cols=108 Identities=20% Similarity=0.277 Sum_probs=90.0
Q ss_pred ccccceeeccccccccccCCC----------CCCCCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEeecCccCC
Q psy7848 625 TKKRALIVNLIKCTNLIPMDS----------NGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKITELSK 694 (754)
Q Consensus 625 p~~g~L~V~V~~A~nL~~~d~----------~G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V~~~dL~~ 694 (754)
...|.|.|.|++|+||+++|. .|.+||||+|++. +....||+++++|+||+|||+|.|.+.. .
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~---~~~~~kT~v~~ktlnP~WNE~F~f~v~~----~ 98 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVD---QVRVGQTSTKQKTNKPTYNEEFCANVTD----G 98 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEET---TEEEEECCCCSSCSSCEEEEEEEEEEEE----E
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEEC---CEeeEEeeecCCCCCCccCcEEEEEcCC----C
Confidence 445899999999999999883 3779999999993 2235799999999999999999999863 3
Q ss_pred CeEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcC--CCcceeeEEeecC
Q psy7848 695 QTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKY--PDHKHEGIHNLSI 749 (754)
Q Consensus 695 ~~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~--P~~~ie~Wh~L~~ 749 (754)
..|.|+|||+|.++.|+|||.+.|++.. +... ++..++.|+.|.+
T Consensus 99 ~~L~~~V~D~d~~~~dd~iG~~~i~l~~----------l~~~~~~~~~~~~W~~L~~ 145 (157)
T 2fk9_A 99 GHLELAVFHETPLGYDHFVANCTLQFQE----------LLRTTGASDTFEGWVDLEP 145 (157)
T ss_dssp CEEEEEEEECCSSSSCEEEEEEEEEHHH----------HHHHHTTCSEEEEEEECBS
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEEHHH----------hhcccCCCCcccEEEECCC
Confidence 6899999999999999999999999863 3433 5567788888864
No 57
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.72 E-value=2.3e-17 Score=162.46 Aligned_cols=136 Identities=24% Similarity=0.381 Sum_probs=95.9
Q ss_pred CcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCC-CceEEEeeeecCCCCCeeceeEEEeeeeccccCcceEEEEE
Q psy7848 482 STTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTK-TSHRLRTKTCLRTINPEFHEKLTFYSVSETDLSLQSLHILV 560 (754)
Q Consensus 482 ~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~-~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el~~~~L~~sV 560 (754)
...+.|.|+|++|++|+.++..+.+||||+|++.+... ...+++|+++++++||+|||.|.|. +... ...|.|.|
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~-v~~~---~~~L~~~V 80 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFR-VLPQ---RHRILFEV 80 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEE-ECTT---TCEEEEEE
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEE-EcCC---CCEEEEEE
Confidence 45689999999999999999999999999999985322 1257899999999999999999985 4322 37899999
Q ss_pred eeCCCCCC-ccceeeeecCcccCCCCccceEeecccCCCCCccccccccccccccceeEEeeecccc
Q psy7848 561 LDDDKYGH-DFLGEARFPLNRLRPHISRDLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCFSTK 626 (754)
Q Consensus 561 ~D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y~p~ 626 (754)
||+|.++. +|||++.|+|.+|..............||+|..... .....|+|+|++.|.|.
T Consensus 81 ~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~-----~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 81 FDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSH-----KSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp EECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSST-----TCCCCSEEEEEEEECC-
T ss_pred EECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCC-----CCccCEEEEEEEEEEeC
Confidence 99999987 999999999999976533310000113444433211 13468999999999987
No 58
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.72 E-value=2.1e-17 Score=153.03 Aligned_cols=121 Identities=20% Similarity=0.319 Sum_probs=99.6
Q ss_pred CCEEEEEEEEecCCCCC---CCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeeccccCcceEEEEE
Q psy7848 484 TCSLHVTLHRAKGLRAM---DIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSETDLSLQSLHILV 560 (754)
Q Consensus 484 ~~~L~VtIi~ArnL~~~---d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el~~~~L~~sV 560 (754)
.+.|.|+|++|++|+.+ |..|.+||||++++.+.. ..+++|+++++|+||+|||+|.|. +... ....|.|.|
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~--~~~~kT~v~~~t~nP~wne~f~f~-v~~~--~~~~l~i~V 76 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEFI-LDPN--QENVLEITL 76 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEEE-ECTT--SCCEEEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCC--CceEEccccCCCCCCcccceEEEE-ecCC--CCCEEEEEE
Confidence 47899999999999985 566899999999997643 268899999999999999999995 4322 357899999
Q ss_pred eeCCCCCCccceeeeecCcccCCCCccceEeecccCCCCCccccccccccccccceeEEeeeccc
Q psy7848 561 LDDDKYGHDFLGEARFPLNRLRPHISRDLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCFST 625 (754)
Q Consensus 561 ~D~d~~g~dfLGev~I~L~~L~~~~~~~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y~p 625 (754)
||+|.+++++||++.|+|.+|..+.....|++|.. ...|.|+|.+...|
T Consensus 77 ~d~d~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~----------------~~~g~i~~~le~~~ 125 (126)
T 1rlw_A 77 MDANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQ----------------VTEMVLEMSLEVAS 125 (126)
T ss_dssp EECCSSCCEEEEEEEEEGGGSCTTCEEEEEEEETT----------------TEEEEEEEEEECCC
T ss_pred EECCCCCCceeEEEEEEHHHccCCCcEEEEEEcCC----------------CceEEEEEEEEeCC
Confidence 99999877999999999999988777777777742 35678888776554
No 59
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.71 E-value=1.5e-17 Score=156.68 Aligned_cols=106 Identities=18% Similarity=0.270 Sum_probs=88.0
Q ss_pred ccceeeccccccccccCCCCCC-----------CCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEeecCccCCC
Q psy7848 627 KRALIVNLIKCTNLIPMDSNGF-----------SDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKITELSKQ 695 (754)
Q Consensus 627 ~g~L~V~V~~A~nL~~~d~~G~-----------sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V~~~dL~~~ 695 (754)
.+.|.|.|++|+||+++|.+|. +||||+|++. +....+|.++++|+||+|||+|.|.+... .
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~---~~~~~~T~~~~~t~nP~WnE~f~f~v~~~----~ 77 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVD---DSRIGQTATKQKTNSPAWHDEFVTDVCNG----R 77 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEET---TEEEEECCCCSSCSSCEEEEEEEEEEEEE----C
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEEC---CeEeeeeeEECCCcCCccCCEEEEEecCC----C
Confidence 4789999999999999885443 9999999993 23367999999999999999999998632 7
Q ss_pred eEEEEEEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcceeeEEeecC
Q psy7848 696 TLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIHNLSI 749 (754)
Q Consensus 696 ~L~ItV~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie~Wh~L~~ 749 (754)
.|.|+|||+|.+++|++||.+.|++. ++...++..++.|+.|.+
T Consensus 78 ~L~~~V~d~d~~~~dd~iG~~~i~l~----------~l~~~~~~~~~~w~~L~~ 121 (136)
T 1gmi_A 78 KIELAVFHDAPIGYDDFVANCTIQFE----------ELLQNGSRHFEDWIDLEP 121 (136)
T ss_dssp EEEEEEEECCSSSSCEEEEEEEEEHH----------HHTSTTCSEEEEEEECBS
T ss_pred EEEEEEEeCCCCCCCCEEEEEEEEHH----------HhcccCCCCccEEEEcCC
Confidence 89999999999999999999999986 344445555677887765
No 60
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.70 E-value=2.4e-17 Score=157.17 Aligned_cols=101 Identities=23% Similarity=0.456 Sum_probs=88.7
Q ss_pred ccceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEeecCccCCCeEEEEEEEccC
Q psy7848 627 KRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKITELSKQTLVITVWDKDY 706 (754)
Q Consensus 627 ~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V~~~dL~~~~L~ItV~D~d~ 706 (754)
.+.|.|.|++|+||+++|.+|.+||||++++ +..+++|+++++|+||.|||+|.|.+... ...|.|+|||++.
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~----~~~~~kT~~~~~t~nP~Wne~f~f~v~~~---~~~l~~~v~d~d~ 88 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGSSDPYVTVQV----GKTKKRTKTIYGNLNPVWEENFHFECHNS---SDRIKVRVLDEDD 88 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEE----TTEEEECCCCCSCSSCEEEEEEEEEECST---TCEEEEEEEECCC
T ss_pred ccEEEEEEEeeeCCCCCCCCCCcCeEEEEEE----CCEEEECCccCCCCCCCcccEEEEEecCC---CCEEEEEEEECCC
Confidence 4899999999999999999999999999999 44688999999999999999999998643 3789999999998
Q ss_pred C-----------CCCceeEEEEEecCCCCchhhhHHhhh
Q psy7848 707 G-----------KSNDYLGCLELCCNSKGDRLRHWVDMM 734 (754)
Q Consensus 707 ~-----------~~ddfLG~v~L~l~s~ge~~~hW~~ll 734 (754)
+ +.|+|||.+.|++........+|+.|.
T Consensus 89 ~~~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~w~~L~ 127 (148)
T 3kwu_A 89 DIKSRVKQRFKRESDDFLGQTIIEVRTLSGEMDVWYNLD 127 (148)
T ss_dssp SHHHHHHTTTSSCSSEEEEEEEEEGGGCCSEEEEEEECB
T ss_pred CccccccccccCCCCccEEEEEEEHHHCcCCCCEEEEcc
Confidence 6 789999999999997755556666655
No 61
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.70 E-value=1.7e-16 Score=151.31 Aligned_cols=119 Identities=29% Similarity=0.469 Sum_probs=96.7
Q ss_pred CCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeeccccCcceEEEEEeeC
Q psy7848 484 TCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSETDLSLQSLHILVLDD 563 (754)
Q Consensus 484 ~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el~~~~L~~sV~D~ 563 (754)
.+.|.|+|++|++|+.+|..|.+||||++++. ...++|+++.+|+||+|||+|.|. +... ...|.|.|||+
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~-----~~~~kT~~~~~t~nP~Wne~f~f~-v~~~---~~~l~~~v~d~ 86 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGSSDPYVTVQVG-----KTKKRTKTIYGNLNPVWEENFHFE-CHNS---SDRIKVRVLDE 86 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEET-----TEEEECCCCCSCSSCEEEEEEEEE-ECST---TCEEEEEEEEC
T ss_pred ccEEEEEEEeeeCCCCCCCCCCcCeEEEEEEC-----CEEEECCccCCCCCCCcccEEEEE-ecCC---CCEEEEEEEEC
Confidence 58899999999999999999999999999993 378899999999999999999995 4322 36899999999
Q ss_pred CCC-----------CC-ccceeeeecCcccCCCCccceEeecccCCCCCccccccccccccccceeEEeeecc
Q psy7848 564 DKY-----------GH-DFLGEARFPLNRLRPHISRDLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCFS 624 (754)
Q Consensus 564 d~~-----------g~-dfLGev~I~L~~L~~~~~~~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y~ 624 (754)
|.+ +. +|||++.|+|.++.. ....|++|.. .. ......|+|+|++.|.
T Consensus 87 d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~~--~~~~w~~L~~------~~-----~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 87 DDDIKSRVKQRFKRESDDFLGQTIIEVRTLSG--EMDVWYNLDK------RT-----DKSAVSGAIRLHISVE 146 (148)
T ss_dssp CCSHHHHHHTTTSSCSSEEEEEEEEEGGGCCS--EEEEEEECBC------SS-----TTCCCCCEEEEEEEEE
T ss_pred CCCccccccccccCCCCccEEEEEEEHHHCcC--CCCEEEEccc------CC-----CCCCCceEEEEEEEEE
Confidence 985 55 999999999999832 3445555542 11 1134679999999885
No 62
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.69 E-value=4.5e-17 Score=150.78 Aligned_cols=102 Identities=21% Similarity=0.348 Sum_probs=84.0
Q ss_pred cceeeccccccccccC---CCCCCCCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEeecCccCCCeEEEEEEEc
Q psy7848 628 RALIVNLIKCTNLIPM---DSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKITELSKQTLVITVWDK 704 (754)
Q Consensus 628 g~L~V~V~~A~nL~~~---d~~G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V~~~dL~~~~L~ItV~D~ 704 (754)
+.|.|.|++|+||+.+ +.+|.+||||++++.+.. ..++||+++++|+||+|||+|.|.+... ....|.|+|||+
T Consensus 3 ~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~-~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~~l~i~V~d~ 79 (126)
T 1rlw_A 3 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTP-DSRKRTRHFNNDINPVWNETFEFILDPN--QENVLEITLMDA 79 (126)
T ss_dssp EEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTST-TCCEECCCCTTCSSCEEEEEEEEEECTT--SCCEEEEEEEEC
T ss_pred cEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCC-CceEEccccCCCCCCcccceEEEEecCC--CCCEEEEEEEEC
Confidence 6899999999999985 567899999999996532 3589999999999999999999998533 357899999999
Q ss_pred cCCCCCceeEEEEEecCCC--CchhhhHHhh
Q psy7848 705 DYGKSNDYLGCLELCCNSK--GDRLRHWVDM 733 (754)
Q Consensus 705 d~~~~ddfLG~v~L~l~s~--ge~~~hW~~l 733 (754)
+.++ |++||.+.|++... +....+|++|
T Consensus 80 d~~~-~~~iG~~~i~l~~l~~~~~~~~~~~L 109 (126)
T 1rlw_A 80 NYVM-DETLGTATFTVSSMKVGEKKEVPFIF 109 (126)
T ss_dssp CSSC-CEEEEEEEEEGGGSCTTCEEEEEEEE
T ss_pred CCCC-CceeEEEEEEHHHccCCCcEEEEEEc
Confidence 9885 99999999999853 2233344444
No 63
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.69 E-value=4.2e-17 Score=153.17 Aligned_cols=121 Identities=26% Similarity=0.394 Sum_probs=99.3
Q ss_pred CCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeec-CCCCCeeceeEEEeeeeccccCcceEEEEEee
Q psy7848 484 TCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCL-RTINPEFHEKLTFYSVSETDLSLQSLHILVLD 562 (754)
Q Consensus 484 ~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~-~TlNP~WnE~f~F~~I~~~el~~~~L~~sV~D 562 (754)
.+.|.|+|++|++|+.++..+.+||||+|++.+ ..++|++++ +++||+|||+|.|. +.. ....|.|.|||
T Consensus 9 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~-v~~---~~~~l~~~V~d 79 (136)
T 1wfj_A 9 HGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT-----QDQKSNVAEGMGTTPEWNETFIFT-VSE---GTTELKAKIFD 79 (136)
T ss_dssp EEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS-----CEEECCCCTTCCSSCEEEEEEEEE-EES---SCCEEEEEECC
T ss_pred cEEEEEEEEeccCCCCcccCCCcCceEEEEECC-----ccceeEeccCCCCCCccCcEEEEE-ECC---CCCEEEEEEEE
Confidence 478999999999999999999999999999965 467999998 89999999999995 443 35799999999
Q ss_pred CCCCCC-ccceeeeecCcccC-CCCccceEeecccCCCCCccccccccccccccceeEEeeeccccc
Q psy7848 563 DDKYGH-DFLGEARFPLNRLR-PHISRDLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCFSTKK 627 (754)
Q Consensus 563 ~d~~g~-dfLGev~I~L~~L~-~~~~~~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y~p~~ 627 (754)
+|.+++ +|||++.|+|.++. .......|+.|. . .....|+|+|++.|.|..
T Consensus 80 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~------~--------~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 80 KDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV------K--------DEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp SSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE------E--------TTEEEEEEEEEEEEEECC
T ss_pred CCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee------c--------CCccCEEEEEEEEEEeCC
Confidence 999987 99999999999983 332233455443 1 135789999999998864
No 64
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.69 E-value=4.3e-17 Score=158.26 Aligned_cols=114 Identities=20% Similarity=0.328 Sum_probs=93.2
Q ss_pred CCEEEEEEEEecCCCCCCC----------CCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeeccccCc
Q psy7848 484 TCSLHVTLHRAKGLRAMDI----------HGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSETDLSL 553 (754)
Q Consensus 484 ~~~L~VtIi~ArnL~~~d~----------~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el~~ 553 (754)
.+.|.|+|++|+||+++|. .+.+||||+|.+.+ ....+|+++.+|+||+|||+|.|. +.. .
T Consensus 28 ~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~----~~~~kT~v~~ktlnP~WNE~F~f~-v~~----~ 98 (157)
T 2fk9_A 28 NGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ----VRVGQTSTKQKTNKPTYNEEFCAN-VTD----G 98 (157)
T ss_dssp EEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT----EEEEECCCCSSCSSCEEEEEEEEE-EEE----E
T ss_pred ccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC----EeeEEeeecCCCCCCccCcEEEEE-cCC----C
Confidence 4789999999999999883 36799999999953 345799999999999999999995 432 3
Q ss_pred ceEEEEEeeCCCCCC-ccceeeeecCcccCCC----CccceEeecccCCCCCccccccccccccccceeEEeeecc
Q psy7848 554 QSLHILVLDDDKYGH-DFLGEARFPLNRLRPH----ISRDLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCFS 624 (754)
Q Consensus 554 ~~L~~sV~D~d~~g~-dfLGev~I~L~~L~~~----~~~~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y~ 624 (754)
..|.|.|||+|.++. +|||++.|+|.+|..+ ...+.|++|+ ..|+|+|.+.|.
T Consensus 99 ~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~------------------~~G~i~l~l~~~ 156 (157)
T 2fk9_A 99 GHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE------------------PEGKVFVVITLT 156 (157)
T ss_dssp CEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB------------------SSCEEEEEEEEC
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC------------------CCcEEEEEEEEE
Confidence 689999999999987 9999999999998643 3445555552 279999998874
No 65
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.69 E-value=5.2e-17 Score=153.05 Aligned_cols=117 Identities=21% Similarity=0.315 Sum_probs=94.7
Q ss_pred CCEEEEEEEEecCCCCCCCCCC-----------CCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeeccccC
Q psy7848 484 TCSLHVTLHRAKGLRAMDIHGT-----------SDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSETDLS 552 (754)
Q Consensus 484 ~~~L~VtIi~ArnL~~~d~~g~-----------sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el~ 552 (754)
.+.|.|+|++|+||+++|..+. +||||+|.+.+ ....+|+++.+|+||+|||+|.|. +...
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~----~~~~~T~~~~~t~nP~WnE~f~f~-v~~~--- 76 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD----SRIGQTATKQKTNSPAWHDEFVTD-VCNG--- 76 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT----EEEEECCCCSSCSSCEEEEEEEEE-EEEE---
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECC----eEeeeeeEECCCcCCccCCEEEEE-ecCC---
Confidence 4789999999999999885443 99999999842 355799999999999999999995 4332
Q ss_pred cceEEEEEeeCCCCCC-ccceeeeecCcccCCCCc--cceEeecccCCCCCccccccccccccccceeEEeeeccccc
Q psy7848 553 LQSLHILVLDDDKYGH-DFLGEARFPLNRLRPHIS--RDLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCFSTKK 627 (754)
Q Consensus 553 ~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~~~~~--~~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y~p~~ 627 (754)
..|.|.|||+|.++. +|||++.|+|.++..... .+.|+.| ...|+|+|.+.|.+..
T Consensus 77 -~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L------------------~~~G~i~l~l~~~~~~ 135 (136)
T 1gmi_A 77 -RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDL------------------EPEGKVYVIIDLSGSS 135 (136)
T ss_dssp -CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEEC------------------BSSCEEEEEEEEEEEE
T ss_pred -CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEc------------------CCCeEEEEEEEEEecC
Confidence 789999999999887 999999999999876432 2344433 2379999999997653
No 66
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.69 E-value=7.8e-17 Score=154.51 Aligned_cols=95 Identities=25% Similarity=0.383 Sum_probs=77.8
Q ss_pred cccceeeccccccccccCCCCCCCCceEEEEecCCCC--cceeeeeeecCCCCCccceeEEEEeecCccCCCeEEEEEEE
Q psy7848 626 KKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLH--KRKYKTGVKWKTLNPIFNEEFAIETKITELSKQTLVITVWD 703 (754)
Q Consensus 626 ~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~--k~k~KT~v~kkTlNP~wNEtF~F~V~~~dL~~~~L~ItV~D 703 (754)
..+.|.|.|++|+||+.++.+|.+||||+|++.+... ..+++|+++++|+||+|||+|.|.+... ...|.|+|||
T Consensus 18 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~---~~~l~~~V~d 94 (153)
T 3b7y_A 18 NSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ---QHRLLFEVFD 94 (153)
T ss_dssp TCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT---TCEEEEEEEE
T ss_pred CccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC---CCEEEEEEEE
Confidence 4478999999999999999999999999999975433 2488999999999999999999998642 5789999999
Q ss_pred ccCCCCCceeEEEEEecCCC
Q psy7848 704 KDYGKSNDYLGCLELCCNSK 723 (754)
Q Consensus 704 ~d~~~~ddfLG~v~L~l~s~ 723 (754)
++.+++|++||.+.|++...
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l 114 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPL 114 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSC
T ss_pred CCCCcCCCeeEEEEEEHHHc
Confidence 99999999999999999864
No 67
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.68 E-value=2.1e-16 Score=147.82 Aligned_cols=123 Identities=27% Similarity=0.364 Sum_probs=95.5
Q ss_pred CCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeeccccCcceEEEEEeeC
Q psy7848 484 TCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSETDLSLQSLHILVLDD 563 (754)
Q Consensus 484 ~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el~~~~L~~sV~D~ 563 (754)
...|.|+|++|++|+.+|..|.+||||++++.+. ...++|+++.+|+||+|||+|.|. +... ..|.|+|||+
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~---~~~~kT~v~~~t~nP~wne~f~f~-v~~~----~~l~~~v~d~ 75 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS---GQCHSTDTVKNTLDPKWNQHYDLY-VGKT----DSITISVWNH 75 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT---CCEEECCCCSSCSSCEEEEEEEEE-EETT----CCEEEEEEEG
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC---CceEECCccCCCCCCCccCEEEEE-eCCC----CEEEEEEEEC
Confidence 3579999999999999999999999999999653 368899999999999999999984 4332 3599999999
Q ss_pred CCCC----CccceeeeecCccc-CCCCccceEeecccCCCCCccccccccccccccceeEEeeec
Q psy7848 564 DKYG----HDFLGEARFPLNRL-RPHISRDLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCF 623 (754)
Q Consensus 564 d~~g----~dfLGev~I~L~~L-~~~~~~~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y 623 (754)
|.++ ++|||++.|++.+| ........+++|.... +.......|+|.|++.+
T Consensus 76 d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~---------~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 76 KKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLN---------PSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp GGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSS---------TTCCCCCCSEEEEEEEE
T ss_pred CCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecC---------CCCCCceeEEEEEEEEc
Confidence 9986 49999999999987 2222334555554311 01113568999999865
No 68
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.67 E-value=2e-16 Score=155.72 Aligned_cols=97 Identities=24% Similarity=0.363 Sum_probs=78.8
Q ss_pred ccccceeeccccccccccCCCCCCCCceEEEEecCCCCc--ceeeeeeecCCCCCccceeEEEEeecCccCCCeEEEEEE
Q psy7848 625 TKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK--RKYKTGVKWKTLNPIFNEEFAIETKITELSKQTLVITVW 702 (754)
Q Consensus 625 p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k--~k~KT~v~kkTlNP~wNEtF~F~V~~~dL~~~~L~ItV~ 702 (754)
...+.|.|.|++|+||+.++.+|.+||||+|++.+...+ .+++|+++++++||+|||+|.|.+... ...|.|+||
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~---~~~L~~~V~ 81 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ---RHRILFEVF 81 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT---TCEEEEEEE
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC---CCEEEEEEE
Confidence 345889999999999999999999999999999754333 478999999999999999999999643 478999999
Q ss_pred EccCCCCCceeEEEEEecCCCC
Q psy7848 703 DKDYGKSNDYLGCLELCCNSKG 724 (754)
Q Consensus 703 D~d~~~~ddfLG~v~L~l~s~g 724 (754)
|++.++.|+|||.+.|+|....
T Consensus 82 d~d~~~~d~~lG~~~i~l~~l~ 103 (176)
T 3m7f_B 82 DENRLTRDDFLGQVDVPLYPLP 103 (176)
T ss_dssp ECC----CEEEEEEEEESCSCC
T ss_pred ECCCCCCCcEEEEEEEEHHHcc
Confidence 9999999999999999998743
No 69
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.66 E-value=5.9e-17 Score=152.16 Aligned_cols=102 Identities=22% Similarity=0.286 Sum_probs=86.5
Q ss_pred cccceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeeec-CCCCCccceeEEEEeecCccCCCeEEEEEEEc
Q psy7848 626 KKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKW-KTLNPIFNEEFAIETKITELSKQTLVITVWDK 704 (754)
Q Consensus 626 ~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~k-kTlNP~wNEtF~F~V~~~dL~~~~L~ItV~D~ 704 (754)
..+.|.|.|++|+||+.++.+|.+||||+|++.+ .+++|++++ +++||+|||+|.|.+.. ....|.|+|||+
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~----~~~kT~~~~~~~~nP~Wne~f~f~v~~---~~~~l~~~V~d~ 80 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT----QDQKSNVAEGMGTTPEWNETFIFTVSE---GTTELKAKIFDK 80 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS----CEEECCCCTTCCSSCEEEEEEEEEEES---SCCEEEEEECCS
T ss_pred CcEEEEEEEEeccCCCCcccCCCcCceEEEEECC----ccceeEeccCCCCCCccCcEEEEEECC---CCCEEEEEEEEC
Confidence 3478999999999999999999999999999943 378999998 89999999999999973 467999999999
Q ss_pred cCCCCCceeEEEEEecCCC---CchhhhHHhhh
Q psy7848 705 DYGKSNDYLGCLELCCNSK---GDRLRHWVDMM 734 (754)
Q Consensus 705 d~~~~ddfLG~v~L~l~s~---ge~~~hW~~ll 734 (754)
+.+++|++||.+.|++... ++....||+|.
T Consensus 81 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~ 113 (136)
T 1wfj_A 81 DVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV 113 (136)
T ss_dssp SSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE
T ss_pred CCCCCCceEEEEEEEHHHhccCCCCCcEEEEee
Confidence 9999999999999998753 22234455554
No 70
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=3e-18 Score=143.23 Aligned_cols=69 Identities=23% Similarity=0.580 Sum_probs=61.4
Q ss_pred HHHHHHHhhhhcc---CCCccccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccch
Q psy7848 117 LVERVDNMKRNVT---GGAAAAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICA 193 (754)
Q Consensus 117 L~~~l~~~k~~~~---~~~~~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~ 193 (754)
+++||+++||++. .++++++.|+||+++|| ++++++++|.+|+|+||++|+++.+ ++.|+|+||+
T Consensus 4 ~~~eL~elrrkgak~~s~~~~~r~CarC~~~LG-------~l~~~g~~C~~Ck~rVC~~Crv~~~-----~~~W~C~VC~ 71 (76)
T 2csz_A 4 GSSGLLEIKRKGAKRGSQHYSDRTCARCQESLG-------RLSPKTNTCRGCNHLVCRDCRIQES-----NGTWRCKVCS 71 (76)
T ss_dssp CCCCCCCCCCCCSCSCCTTCCCCBCSSSCCBCS-------SSCTTTSEETTTTEECCTTSEEECS-----TTCEEEHHHH
T ss_pred hHHHHHHHHHccccCcCcCCCccchhhhCcccc-------ccccCCCcCcccChhhcccccccCC-----CCCEEEeeCc
Confidence 4678999999984 33568899999999999 7888899999999999999999996 4899999999
Q ss_pred hhhh
Q psy7848 194 ETRE 197 (754)
Q Consensus 194 ~~re 197 (754)
|++|
T Consensus 72 k~~e 75 (76)
T 2csz_A 72 GPSS 75 (76)
T ss_dssp SSCC
T ss_pred hhhc
Confidence 9986
No 71
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.65 E-value=3e-16 Score=146.79 Aligned_cols=89 Identities=24% Similarity=0.436 Sum_probs=79.0
Q ss_pred cceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEeecCccCCCeEEEEEEEccCC
Q psy7848 628 RALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKITELSKQTLVITVWDKDYG 707 (754)
Q Consensus 628 g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V~~~dL~~~~L~ItV~D~d~~ 707 (754)
..|.|.|++|++|+++|.+|.+||||+|++.+. ..+++|+++++|+||+|||+|.|.+... ..|.|+|||++.+
T Consensus 5 ~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~--~~~~kT~v~~~t~nP~wne~f~f~v~~~----~~l~~~v~d~d~~ 78 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS--GQCHSTDTVKNTLDPKWNQHYDLYVGKT----DSITISVWNHKKI 78 (132)
T ss_dssp EEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT--CCEEECCCCSSCSSCEEEEEEEEEEETT----CCEEEEEEEGGGT
T ss_pred EEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC--CceEECCccCCCCCCCccCEEEEEeCCC----CEEEEEEEECCCC
Confidence 578999999999999999999999999999543 3589999999999999999999998643 3599999999988
Q ss_pred CC---CceeEEEEEecCC
Q psy7848 708 KS---NDYLGCLELCCNS 722 (754)
Q Consensus 708 ~~---ddfLG~v~L~l~s 722 (754)
++ |+|||.+.|++..
T Consensus 79 ~~~~~d~~lG~~~i~l~~ 96 (132)
T 3pyc_A 79 HKKQGAGFLGCVRLLSNA 96 (132)
T ss_dssp TSSTTTTEEEEEEECHHH
T ss_pred CCCCCCCceEEEEEeHHH
Confidence 76 7999999999764
No 72
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.61 E-value=1.7e-15 Score=149.31 Aligned_cols=122 Identities=19% Similarity=0.215 Sum_probs=93.9
Q ss_pred CCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeeccccCcceEEEEEeeC
Q psy7848 484 TCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSETDLSLQSLHILVLDD 563 (754)
Q Consensus 484 ~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el~~~~L~~sV~D~ 563 (754)
.+.|.|+|++|++|+..+..+.+||||+|++.+ .+++|+++.+|+||+|||+|.|. +.. ...|.|.|||+
T Consensus 35 ~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~-----~~~kT~v~~~tlnP~Wne~f~f~-v~~----~~~L~~~V~D~ 104 (173)
T 2nq3_A 35 KSQLQITVISAKLKENKKNWFGPSPYVEVTVDG-----QSKKTEKCNNTNSPKWKQPLTVI-VTP----VSKLHFRVWSH 104 (173)
T ss_dssp CEEEEEEEEEEEECCCC--CCCCCEEEEEEETT-----EEEECCCCSSCSSCEEEEEEEEE-ECT----TCEEEEEEEEC
T ss_pred ceEEEEEEEEeECCCCcccCCCCCeEEEEEECC-----EEeEccccCCCCCCeECCEEEEE-eCC----CCEEEEEEEEC
Confidence 467999999999999444344599999999953 78999999999999999999994 432 58999999999
Q ss_pred CCCCC-ccceeeeecCcccCCCCcc-----ceEeecccCCCCCccccccccccccccceeEEeeecccc
Q psy7848 564 DKYGH-DFLGEARFPLNRLRPHISR-----DLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCFSTK 626 (754)
Q Consensus 564 d~~g~-dfLGev~I~L~~L~~~~~~-----~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y~p~ 626 (754)
|.++. +|||++.|+|.++...... ..|+.|.. .. ......|+|.|.+.|.+.
T Consensus 105 d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~------~~-----~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 105 QTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGG------DK-----EPTETIGDLSICLDGLQL 162 (173)
T ss_dssp CSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEE------SS-----CTTSEEEEEEEEEESEEC
T ss_pred CCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECcc------CC-----CCCcccEEEEEEEeeeec
Confidence 99987 9999999999998643211 33555532 10 113568999999988643
No 73
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.60 E-value=1.8e-15 Score=149.10 Aligned_cols=89 Identities=18% Similarity=0.183 Sum_probs=76.7
Q ss_pred cccceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEeecCccCCCeEEEEEEEcc
Q psy7848 626 KKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKITELSKQTLVITVWDKD 705 (754)
Q Consensus 626 ~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V~~~dL~~~~L~ItV~D~d 705 (754)
..+.|.|.|++|++|+..+..+.+||||+|++.+ .++||+++++|+||+|||+|.|.+. ....|.|+|||+|
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~----~~~kT~v~~~tlnP~Wne~f~f~v~----~~~~L~~~V~D~d 105 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDG----QSKKTEKCNNTNSPKWKQPLTVIVT----PVSKLHFRVWSHQ 105 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETT----EEEECCCCSSCSSCEEEEEEEEEEC----TTCEEEEEEEECC
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECC----EEeEccccCCCCCCeECCEEEEEeC----CCCEEEEEEEECC
Confidence 3478999999999999444444499999999942 6899999999999999999999984 2689999999999
Q ss_pred CCCCCceeEEEEEecCC
Q psy7848 706 YGKSNDYLGCLELCCNS 722 (754)
Q Consensus 706 ~~~~ddfLG~v~L~l~s 722 (754)
.+++|+|||.+.|++..
T Consensus 106 ~~~~dd~lG~~~i~l~~ 122 (173)
T 2nq3_A 106 TLKSDVLLGTAALDIYE 122 (173)
T ss_dssp SSSCCEEEEEEEEEHHH
T ss_pred CCCCCceEEEEEEEHHH
Confidence 99999999999999874
No 74
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.50 E-value=3.9e-14 Score=133.15 Aligned_cols=83 Identities=16% Similarity=0.208 Sum_probs=69.0
Q ss_pred cceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeee-cCCCCCccceeEEEEeecCccCCCeEEEEEEEccC
Q psy7848 628 RALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVK-WKTLNPIFNEEFAIETKITELSKQTLVITVWDKDY 706 (754)
Q Consensus 628 g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~-kkTlNP~wNEtF~F~V~~~dL~~~~L~ItV~D~d~ 706 (754)
+.|.|+|++|++|. .+|.+||||+|.. ...||.++ .+|+||+|||+|.|.+.. ....|.|+|||+|
T Consensus 5 ~~L~V~V~~A~~l~---~~g~~DPYv~v~~------~~~kt~~~~~~t~nP~WnE~f~f~v~~---~~~~L~~~V~D~d- 71 (131)
T 2cjt_A 5 SLLCVGVKKAKFDG---AQEKFNTYVTLKV------QNVKSTTIAVRGSQPSWEQDFMFEINR---LDLGLTVEVWNKG- 71 (131)
T ss_dssp EEEEEEEEEEECSS---CGGGCEEEEEEEE------TTEEEECCCEESSSCEEEEEEEEEECC---CSSEEEEEEEECC-
T ss_pred eEEEEEEEEeECCC---CCCCcCeEEEEEe------cCEEEeEecCCCCCceECCEEEEEEeC---CCCeEEEEEEECC-
Confidence 68999999999885 2678999999992 13455544 479999999999999963 2467999999999
Q ss_pred CCCCceeEEEEEecCCC
Q psy7848 707 GKSNDYLGCLELCCNSK 723 (754)
Q Consensus 707 ~~~ddfLG~v~L~l~s~ 723 (754)
++.|++||.+.|++...
T Consensus 72 ~~~dd~iG~~~i~l~~l 88 (131)
T 2cjt_A 72 LIWDTMVGTVWIPLRTI 88 (131)
T ss_dssp SSCEEEEEEEEEEGGGS
T ss_pred CCCCCeEEEEEEEHHHh
Confidence 88999999999999864
No 75
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.48 E-value=5.5e-14 Score=160.05 Aligned_cols=92 Identities=28% Similarity=0.434 Sum_probs=82.9
Q ss_pred cccceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEeecCccCCCeEEEEEEEcc
Q psy7848 626 KKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKITELSKQTLVITVWDKD 705 (754)
Q Consensus 626 ~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V~~~dL~~~~L~ItV~D~d 705 (754)
..+.|.|.|++|+||+++|.+|.+||||+|++ +..+++|+++++|+||+|||+|.|.+. .+....|.|+|||+|
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~----~~~~~~T~~~~~t~nP~w~e~f~f~~~--~~~~~~l~~~v~d~d 458 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISM----GSQSYTTRTIQDTLNPKWNFNCQFFIK--DLYQDVLCLTLFDRD 458 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEE----TTEEEECCCCSSCSSCEEEEEEEEEES--CTTTCEEEEEEEECC
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEE----CCeeccCCccCCCCCCccCceEEEEec--CCCCCEEEEEEEeCC
Confidence 34789999999999999999999999999999 345899999999999999999999985 445678999999999
Q ss_pred CCCCCceeEEEEEecCCC
Q psy7848 706 YGKSNDYLGCLELCCNSK 723 (754)
Q Consensus 706 ~~~~ddfLG~v~L~l~s~ 723 (754)
.+++|+|||.+.|++...
T Consensus 459 ~~~~~d~lG~~~~~l~~l 476 (510)
T 3jzy_A 459 QFSPDDFLGRTEIPVAKI 476 (510)
T ss_dssp SSSSCCEEEEEEEEHHHH
T ss_pred CCCCCCceEEEEEEHHHh
Confidence 999999999999999863
No 76
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.47 E-value=1.6e-13 Score=128.93 Aligned_cols=86 Identities=20% Similarity=0.319 Sum_probs=68.9
Q ss_pred CCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeee-cCCCCCeeceeEEEeeeeccccCcceEEEEEee
Q psy7848 484 TCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTC-LRTINPEFHEKLTFYSVSETDLSLQSLHILVLD 562 (754)
Q Consensus 484 ~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi-~~TlNP~WnE~f~F~~I~~~el~~~~L~~sV~D 562 (754)
.+.|.|+|++|++|+. .|.+||||+|. . ...+|+++ .+++||+|||+|.|. +... ...|.|.|||
T Consensus 4 ~~~L~V~V~~A~~l~~---~g~~DPYv~v~-~------~~~kt~~~~~~t~nP~WnE~f~f~-v~~~---~~~L~~~V~D 69 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA---QEKFNTYVTLK-V------QNVKSTTIAVRGSQPSWEQDFMFE-INRL---DLGLTVEVWN 69 (131)
T ss_dssp CEEEEEEEEEEECSSC---GGGCEEEEEEE-E------TTEEEECCCEESSSCEEEEEEEEE-ECCC---SSEEEEEEEE
T ss_pred ceEEEEEEEEeECCCC---CCCcCeEEEEE-e------cCEEEeEecCCCCCceECCEEEEE-EeCC---CCeEEEEEEE
Confidence 3679999999998852 67899999999 2 23355555 479999999999995 4422 3579999999
Q ss_pred CCCCCC-ccceeeeecCcccCCC
Q psy7848 563 DDKYGH-DFLGEARFPLNRLRPH 584 (754)
Q Consensus 563 ~d~~g~-dfLGev~I~L~~L~~~ 584 (754)
+| ++. +|||++.|+|.++...
T Consensus 70 ~d-~~~dd~iG~~~i~l~~l~~~ 91 (131)
T 2cjt_A 70 KG-LIWDTMVGTVWIPLRTIRQS 91 (131)
T ss_dssp CC-SSCEEEEEEEEEEGGGSCBC
T ss_pred CC-CCCCCeEEEEEEEHHHhhhc
Confidence 99 777 9999999999998644
No 77
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.47 E-value=1e-13 Score=131.03 Aligned_cols=122 Identities=15% Similarity=0.221 Sum_probs=99.9
Q ss_pred CCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeec-CCCCCeeceeEEEeeeeccccCcceEEEEEee
Q psy7848 484 TCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCL-RTINPEFHEKLTFYSVSETDLSLQSLHILVLD 562 (754)
Q Consensus 484 ~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~-~TlNP~WnE~f~F~~I~~~el~~~~L~~sV~D 562 (754)
.-.|.|+|..|.+|+ |.+|||+++.+ +..+++|++++ ++.||+|||.|.|. +.........|.|.|+|
T Consensus 20 ~msL~V~l~~a~~Lp-----g~~Dp~akv~F-----Rg~k~kTkvi~~~~~npvfnE~F~wp-l~~~ld~~e~L~v~V~d 88 (144)
T 3l9b_A 20 HMALIVHLKTVSELR-----GRADRIAKVTF-----RGQSFYSRVLENCEDVADFDETFRWP-VASSIDRNEVLEIQIFN 88 (144)
T ss_dssp CEEEEEEEEEEESCC-----SCEEEEEEEEE-----TTEEEECCCEEEECSCEEEEEEEEEE-ESSCCCTTCEEEEEEEE
T ss_pred cEEEEEEEEEecCCC-----CCCCCeEEEEE-----eccceeeEEeccCCCCceEcceEEec-CCCCCCCCCEEEEEEEE
Confidence 356999999999998 47899999999 44899999998 69999999999995 55566677999999999
Q ss_pred CCCCCC-ccceeeeecCcccCCCCccceEeecccCCCCCccccccccccccccceeEEeeecccccc
Q psy7848 563 DDKYGH-DFLGEARFPLNRLRPHISRDLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCFSTKKR 628 (754)
Q Consensus 563 ~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y~p~~g 628 (754)
++++++ .+||++.|+|.+|.......++..|.+ .......+.|.+.+.|.|..|
T Consensus 89 ~~~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD------------~n~~~~~a~I~l~l~Y~pp~g 143 (144)
T 3l9b_A 89 YSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLID------------DNNAIIKTSLSMEVRYQAADG 143 (144)
T ss_dssp ECTTSCCEEEEEEEEESHHHHHHSEEEEEEEEEC------------TTSCEEEEEEEEEEEEEETTC
T ss_pred CccccCCCEEEEEEEEhHHhccCCeEEEeecccC------------CCCCccccEEEEEEEecCCCC
Confidence 999998 999999999999987655555544432 111234489999999998765
No 78
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.46 E-value=4.4e-14 Score=166.82 Aligned_cols=125 Identities=31% Similarity=0.601 Sum_probs=105.9
Q ss_pred ccccccceeEEeeeccccccceeeccccccccccCCCCCCCCceEEEEecCCCCc-ceeeeeeecCCCCCccceeEEEEe
Q psy7848 609 EECWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK-RKYKTGVKWKTLNPIFNEEFAIET 687 (754)
Q Consensus 609 ~~~~~~GeL~VsL~y~p~~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k-~k~KT~v~kkTlNP~wNEtF~F~V 687 (754)
+....+|.|.+++.|. .+.|.|.|++|+||.++|.+|.+||||++++.++... .++||+++++|+||+|||+|.|.+
T Consensus 155 d~~~~~g~i~~~~~~~--~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~ 232 (674)
T 3pfq_A 155 DHTERRGRIYIQAHID--REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQL 232 (674)
T ss_dssp CSSCCSCEEEEEEEEC--SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEEC
T ss_pred ccccccccccccceec--cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeec
Confidence 4456789998888875 5789999999999999999999999999999887544 489999999999999999999998
Q ss_pred ecCccCCCeEEEEEEEccCCCCCceeEEEEEecCC-CCchhhhHHhhhcC
Q psy7848 688 KITELSKQTLVITVWDKDYGKSNDYLGCLELCCNS-KGDRLRHWVDMMKY 736 (754)
Q Consensus 688 ~~~dL~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s-~ge~~~hW~~ll~~ 736 (754)
...+. ...|.|+|||+|.++.|++||.+.+++.. ...+..+|+.|+..
T Consensus 233 ~~~~~-~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~~~~w~~Lls~ 281 (674)
T 3pfq_A 233 KESDK-DRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQ 281 (674)
T ss_dssp CSTTT-TCEEEEEEEECCSSSCCEECCBCCCBTTHHHHCCEEEEEECBCT
T ss_pred ccCCc-cceeeeEEeecccccccccccccccchhhhccCCcccceeeccc
Confidence 76553 46799999999999999999999999885 22345677777643
No 79
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.44 E-value=1.6e-13 Score=156.29 Aligned_cols=121 Identities=22% Similarity=0.471 Sum_probs=95.1
Q ss_pred cCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeeccccCcceEEEEEee
Q psy7848 483 TTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSETDLSLQSLHILVLD 562 (754)
Q Consensus 483 ~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el~~~~L~~sV~D 562 (754)
..+.|.|+|++|++|+.+|..|.+||||+|++.+ ..++|+++.+|+||+|||+|.|. + .......|+|.|||
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~-----~~~~T~~~~~t~nP~w~e~f~f~-~--~~~~~~~l~~~v~d 456 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGS-----QSYTTRTIQDTLNPKWNFNCQFF-I--KDLYQDVLCLTLFD 456 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT-----EEEECCCCSSCSSCEEEEEEEEE-E--SCTTTCEEEEEEEE
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECC-----eeccCCccCCCCCCccCceEEEE-e--cCCCCCEEEEEEEe
Confidence 4578999999999999999999999999999943 78899999999999999999984 3 23345789999999
Q ss_pred CCCCCC-ccceeeeecCcccCCCCccceEeecccCCCCCccccccccccccccceeEEeeec
Q psy7848 563 DDKYGH-DFLGEARFPLNRLRPHISRDLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCF 623 (754)
Q Consensus 563 ~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y 623 (754)
+|.++. +|||++.++|.++..+.... .++..|+++. ....|+|.|.+.+
T Consensus 457 ~d~~~~~d~lG~~~~~l~~l~~~~~~~--~~~~~~~~l~----------~~~~G~i~l~~~l 506 (510)
T 3jzy_A 457 RDQFSPDDFLGRTEIPVAKIRTEQESK--GPMTRRLLLH----------EVPTGEVWVRFDL 506 (510)
T ss_dssp CCSSSSCCEEEEEEEEHHHHHHHHHHH--CSCCEEEECB----------SSSSCEEEEEEEE
T ss_pred CCCCCCCCceEEEEEEHHHhccccCCC--CceeeeecCC----------CCCCceEEEEEEE
Confidence 999987 99999999999986543211 1122333332 2356888888765
No 80
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.43 E-value=1.9e-13 Score=156.64 Aligned_cols=96 Identities=26% Similarity=0.518 Sum_probs=82.3
Q ss_pred cceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEeecCccCCCeEEEEEEEccCC
Q psy7848 628 RALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKITELSKQTLVITVWDKDYG 707 (754)
Q Consensus 628 g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V~~~dL~~~~L~ItV~D~d~~ 707 (754)
+.|.|.|++|+||+. |.+|.+||||+|++. ..++||+++++|+||+|||+|.|.+.... ....|.|+|||+|.+
T Consensus 394 ~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~----~~~~kTkvik~tlNP~Wne~f~f~~~~~~-~~~~L~~~V~D~D~~ 467 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWG-DYTTATDAYLKVFFG----GQEFRTGVVWNNNNPRWTDKMDFENVLLS-TGGPLRVQVWDADYG 467 (540)
T ss_dssp EEEEEEEEEEESCCC-SSCSCCCEEEEEEET----TEEEECCCBCSCSSCBCCCCEEEEEEETT-TCCCEEEEEEECCSS
T ss_pred cEEEEEEEEccCCCc-ccCCCcCeEEEEEEC----CEeeeeeeecCCCCCCCCeEEEEEEecCC-CCCEEEEEEEECCCC
Confidence 689999999999998 999999999999994 34799999999999999999999864211 357899999999999
Q ss_pred CCCceeEEEEEecCCCCchhhhHH
Q psy7848 708 KSNDYLGCLELCCNSKGDRLRHWV 731 (754)
Q Consensus 708 ~~ddfLG~v~L~l~s~ge~~~hW~ 731 (754)
++|||||.+.++|.. |. ..+|.
T Consensus 468 ~~dD~LG~~~~~L~~-g~-~~~~~ 489 (540)
T 3nsj_A 468 WDDDLLGSCDRSPHS-GF-HEVTC 489 (540)
T ss_dssp SCCEEEEEEEECCCS-EE-EEEEE
T ss_pred CCCCEEEEEEEEeeC-Cc-EEEEE
Confidence 999999999999984 32 34554
No 81
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.43 E-value=1.2e-13 Score=163.11 Aligned_cols=105 Identities=20% Similarity=0.325 Sum_probs=88.6
Q ss_pred cccceeecccccccccc---CCCCCCCCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEeecCccCCCeEEEEEE
Q psy7848 626 KKRALIVNLIKCTNLIP---MDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKITELSKQTLVITVW 702 (754)
Q Consensus 626 ~~g~L~V~V~~A~nL~~---~d~~G~sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V~~~dL~~~~L~ItV~ 702 (754)
..+.|.|.|++|++|+. +|.+|.+||||+|++.+.. ..++||+++++|+||+|||+|.|.+... ....|.|+||
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~-~~k~kTkvik~tlNPvWNEtF~F~v~~~--~~~~L~~~V~ 92 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTP-DSRKRTRHFNNDINPVWNETFEFILDPN--QENVLEITLM 92 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTST-TCCEECCCCTTCSSCEEEEEEEEEECTT--SCCBCEEEEE
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCC-CCeEecceEcCCCCCeeeeEEEEEecCC--CCCEEEEEEE
Confidence 34789999999999999 8888999999999997542 3589999999999999999999999642 4578999999
Q ss_pred EccCCCCCceeEEEEEecCCC--CchhhhHHhhh
Q psy7848 703 DKDYGKSNDYLGCLELCCNSK--GDRLRHWVDMM 734 (754)
Q Consensus 703 D~d~~~~ddfLG~v~L~l~s~--ge~~~hW~~ll 734 (754)
|+|.++ |++||.+.|++... +....+|++|.
T Consensus 93 D~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~ 125 (749)
T 1cjy_A 93 DANYVM-DETLGTATFTVSSMKVGEKKEVPFIFN 125 (749)
T ss_dssp ECCSSS-CEEEEEECCBSTTSCTTCCCCEEEEET
T ss_pred ECCCCC-CceeEEEEEEHHHcCCCCceEEEEecC
Confidence 999998 99999999999863 33445566554
No 82
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.43 E-value=2.6e-13 Score=132.99 Aligned_cols=83 Identities=14% Similarity=0.196 Sum_probs=69.6
Q ss_pred cceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeeec-CCCCCccceeEEEEeecCccCCCeEEEEEEEccC
Q psy7848 628 RALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKW-KTLNPIFNEEFAIETKITELSKQTLVITVWDKDY 706 (754)
Q Consensus 628 g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~k-kTlNP~wNEtF~F~V~~~dL~~~~L~ItV~D~d~ 706 (754)
+.|.|.|++|++|. .+|.+||||+|.. ..+||.+++ +++||+|||+|.|.+.. ....|.|+|||+|
T Consensus 14 ~~L~V~V~~A~~l~---~~g~~DPYV~v~~------~~~kt~~~~~~t~nP~WnE~f~f~v~~---~~~~L~~~V~D~d- 80 (167)
T 2cjs_A 14 SLLCVGVKKAKFDG---AQEKFNTYVTLKV------QNVESTTIAVRGSQPSWEQDFMFEINR---LDLGLTVEVWNKG- 80 (167)
T ss_dssp CEEEEEEEEEECSS---CGGGCEEEEEEEE------TTEEEECCCEESSSCEEEEEEEEECCC---TTSEEEEEEEECC-
T ss_pred EEEEEEEEEEECCC---CCCCCCeEEEEEe------cceEEEEecCCCCCCCCCCEEEEEeeC---CCCEEEEEEEECC-
Confidence 68999999999884 3688999999992 235666654 79999999999999963 2467999999999
Q ss_pred CCCCceeEEEEEecCCC
Q psy7848 707 GKSNDYLGCLELCCNSK 723 (754)
Q Consensus 707 ~~~ddfLG~v~L~l~s~ 723 (754)
++.|++||.+.|++...
T Consensus 81 ~~~dd~iG~~~i~L~~l 97 (167)
T 2cjs_A 81 LIWDTMVGTVWIPLRTI 97 (167)
T ss_dssp SSCCEEEEEEEEEGGGS
T ss_pred CCCCceEEEEEEEHHHh
Confidence 88899999999999864
No 83
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.42 E-value=2e-13 Score=159.41 Aligned_cols=113 Identities=23% Similarity=0.314 Sum_probs=94.0
Q ss_pred ccceeeccccccccccCCC--CCCCCceEEEEecCCCCc-ceeeeeeecCC-CCCccceeEEEEeecCccCCCeEEEEEE
Q psy7848 627 KRALIVNLIKCTNLIPMDS--NGFSDPFIKLYLKPDLHK-RKYKTGVKWKT-LNPIFNEEFAIETKITELSKQTLVITVW 702 (754)
Q Consensus 627 ~g~L~V~V~~A~nL~~~d~--~G~sDPYVKV~L~~~~~k-~k~KT~v~kkT-lNP~wNEtF~F~V~~~dL~~~~L~ItV~ 702 (754)
.+.|.|.|++|++|+.++. +|.+||||+|.+.+.... .++||++++++ +||+|||+|.|.|...++ ..|.|+||
T Consensus 496 ~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el--~~L~~~V~ 573 (624)
T 1djx_A 496 PERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDL--ALVRFMVE 573 (624)
T ss_dssp CEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGG--CEEEEEEE
T ss_pred ceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCC--CEEEEEEE
Confidence 4789999999999999884 789999999999654322 48899999998 999999999999975554 68999999
Q ss_pred EccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCccee
Q psy7848 703 DKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHE 742 (754)
Q Consensus 703 D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie 742 (754)
|+|.+++|+|||.+.|++.....++. |+.|...-+.++.
T Consensus 574 D~D~~~~dd~iG~~~ipl~~L~~G~r-~v~L~d~~g~~~~ 612 (624)
T 1djx_A 574 DYDSSSKNDFIGQSTIPWNSLKQGYR-HVHLLSKNGDQHP 612 (624)
T ss_dssp ECCSSSCCEEEEEEEEEGGGBCCEEE-EEEEECTTSCEEE
T ss_pred EcCCCCCCceeEEEEEEHHHcCCCcE-EEeCCCCCcCCCC
Confidence 99999999999999999998665553 6677666565543
No 84
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.40 E-value=1.1e-12 Score=150.26 Aligned_cols=87 Identities=25% Similarity=0.311 Sum_probs=76.6
Q ss_pred CEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeeccccCcceEEEEEeeCC
Q psy7848 485 CSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSETDLSLQSLHILVLDDD 564 (754)
Q Consensus 485 ~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el~~~~L~~sV~D~d 564 (754)
+.|.|+|++|++|+. |..|.+||||+|.+.+ ..++|+++++++||+|||+|.|..+... ....|+|.|||+|
T Consensus 394 ~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~-----~~~kTkvik~tlNP~Wne~f~f~~~~~~--~~~~L~~~V~D~D 465 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWG-DYTTATDAYLKVFFGG-----QEFRTGVVWNNNNPRWTDKMDFENVLLS--TGGPLRVQVWDAD 465 (540)
T ss_dssp EEEEEEEEEEESCCC-SSCSCCCEEEEEEETT-----EEEECCCBCSCSSCBCCCCEEEEEEETT--TCCCEEEEEEECC
T ss_pred cEEEEEEEEccCCCc-ccCCCcCeEEEEEECC-----EeeeeeeecCCCCCCCCeEEEEEEecCC--CCCEEEEEEEECC
Confidence 578899999999999 9999999999999953 5699999999999999999998533222 3578999999999
Q ss_pred CCCC-ccceeeeecCc
Q psy7848 565 KYGH-DFLGEARFPLN 579 (754)
Q Consensus 565 ~~g~-dfLGev~I~L~ 579 (754)
.+++ ||||++.++|.
T Consensus 466 ~~~~dD~LG~~~~~L~ 481 (540)
T 3nsj_A 466 YGWDDDLLGSCDRSPH 481 (540)
T ss_dssp SSSCCEEEEEEEECCC
T ss_pred CCCCCCEEEEEEEEee
Confidence 9988 99999999998
No 85
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.35 E-value=7.2e-13 Score=125.16 Aligned_cols=108 Identities=18% Similarity=0.178 Sum_probs=87.9
Q ss_pred cceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeeec-CCCCCccceeEEEEeecCccCCCeEEEEEEEccC
Q psy7848 628 RALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKW-KTLNPIFNEEFAIETKITELSKQTLVITVWDKDY 706 (754)
Q Consensus 628 g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~k-kTlNP~wNEtF~F~V~~~dL~~~~L~ItV~D~d~ 706 (754)
-.|+|.|.+|.+|+ |.+|||+++.+ ...++||++++ .++||+|||.|.|++........+|.|.|+|++.
T Consensus 21 msL~V~l~~a~~Lp-----g~~Dp~akv~F----Rg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~ 91 (144)
T 3l9b_A 21 MALIVHLKTVSELR-----GRADRIAKVTF----RGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK 91 (144)
T ss_dssp EEEEEEEEEEESCC-----SCEEEEEEEEE----TTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT
T ss_pred EEEEEEEEEecCCC-----CCCCCeEEEEE----eccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc
Confidence 35889999999998 57999999999 45699999998 6999999999999998766678899999999999
Q ss_pred CCCCceeEEEEEecCC--CCchhhhHHhhhcCCCcceeeE
Q psy7848 707 GKSNDYLGCLELCCNS--KGDRLRHWVDMMKYPDHKHEGI 744 (754)
Q Consensus 707 ~~~ddfLG~v~L~l~s--~ge~~~hW~~ll~~P~~~ie~W 744 (754)
+++|.+||.+.|+|.. .+.....+..|+.....++...
T Consensus 92 v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~ 131 (144)
T 3l9b_A 92 VFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTS 131 (144)
T ss_dssp TSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEE
T ss_pred ccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccE
Confidence 9999999999999875 2223333455555555555443
No 86
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.34 E-value=1.2e-12 Score=128.20 Aligned_cols=86 Identities=20% Similarity=0.304 Sum_probs=69.1
Q ss_pred CCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeec-CCCCCeeceeEEEeeeeccccCcceEEEEEee
Q psy7848 484 TCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCL-RTINPEFHEKLTFYSVSETDLSLQSLHILVLD 562 (754)
Q Consensus 484 ~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~-~TlNP~WnE~f~F~~I~~~el~~~~L~~sV~D 562 (754)
.+.|.|+|++|++|+ ..+.+||||+|. . ...+|+++. +++||+|||+|.|. +.. . ...|.|.|||
T Consensus 13 ~~~L~V~V~~A~~l~---~~g~~DPYV~v~-~------~~~kt~~~~~~t~nP~WnE~f~f~-v~~--~-~~~L~~~V~D 78 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---AQEKFNTYVTLK-V------QNVESTTIAVRGSQPSWEQDFMFE-INR--L-DLGLTVEVWN 78 (167)
T ss_dssp CCEEEEEEEEEECSS---CGGGCEEEEEEE-E------TTEEEECCCEESSSCEEEEEEEEE-CCC--T-TSEEEEEEEE
T ss_pred eEEEEEEEEEEECCC---CCCCCCeEEEEE-e------cceEEEEecCCCCCCCCCCEEEEE-eeC--C-CCEEEEEEEE
Confidence 358999999999884 367899999999 2 234666665 69999999999994 432 2 3579999999
Q ss_pred CCCCCC-ccceeeeecCcccCCC
Q psy7848 563 DDKYGH-DFLGEARFPLNRLRPH 584 (754)
Q Consensus 563 ~d~~g~-dfLGev~I~L~~L~~~ 584 (754)
+| ++. +|||++.|+|.++...
T Consensus 79 ~d-~~~dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 79 KG-LIWDTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp CC-SSCCEEEEEEEEEGGGSCBC
T ss_pred CC-CCCCceEEEEEEEHHHhccc
Confidence 99 666 9999999999998654
No 87
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.34 E-value=3.7e-12 Score=150.40 Aligned_cols=120 Identities=33% Similarity=0.476 Sum_probs=102.2
Q ss_pred CceeEEEEEEEEECcCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeec
Q psy7848 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSE 548 (754)
Q Consensus 469 ~~~G~I~~sl~Yd~~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~ 548 (754)
...|.|.+++.|+ .+.|.|+|++|++|.++|.+|.+||||++.+.++.....+.+|+++.+|+||+|||+|.|. +..
T Consensus 158 ~~~g~i~~~~~~~--~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~-~~~ 234 (674)
T 3pfq_A 158 ERRGRIYIQAHID--REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQ-LKE 234 (674)
T ss_dssp CCSCEEEEEEEEC--SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEE-CCS
T ss_pred cccccccccceec--cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeee-ccc
Confidence 4688999998885 7899999999999999999999999999999887666678999999999999999999995 444
Q ss_pred cccCcceEEEEEeeCCCCCC-ccceeeeecCcccCCCCccceEeec
Q psy7848 549 TDLSLQSLHILVLDDDKYGH-DFLGEARFPLNRLRPHISRDLCLNL 593 (754)
Q Consensus 549 ~el~~~~L~~sV~D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L 593 (754)
.+. ...|.|+|||+|.++. +|||++.|+|.++.... ...|..+
T Consensus 235 ~~~-~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~-~~~w~~L 278 (674)
T 3pfq_A 235 SDK-DRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG-VDGWFKL 278 (674)
T ss_dssp TTT-TCEEEEEEEECCSSSCCEECCBCCCBTTHHHHCC-EEEEEEC
T ss_pred CCc-cceeeeEEeecccccccccccccccchhhhccCC-cccceee
Confidence 443 3579999999999988 99999999999987552 3445544
No 88
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.33 E-value=6.2e-12 Score=146.87 Aligned_cols=124 Identities=19% Similarity=0.343 Sum_probs=95.6
Q ss_pred cCCEEEEEEEEecCCCCCCC--CCCCCcEEEEEEeCCCCCceEEEeeeecCC-CCCeeceeEEEeeeeccccCcceEEEE
Q psy7848 483 TTCSLHVTLHRAKGLRAMDI--HGTSDPFCKLNLVPLTKTSHRLRTKTCLRT-INPEFHEKLTFYSVSETDLSLQSLHIL 559 (754)
Q Consensus 483 ~~~~L~VtIi~ArnL~~~d~--~g~sDPYVkv~Llp~~~~~~~~rTkvi~~T-lNP~WnE~f~F~~I~~~el~~~~L~~s 559 (754)
..+.|.|+|++|++|+..+. .+.+||||+|.+.+......+.||+++.++ +||+|||+|.|. +...++ ..|+|.
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~-v~~~el--~~L~~~ 571 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFE-VTVPDL--ALVRFM 571 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEE-ESCGGG--CEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEE-EecCCC--CEEEEE
Confidence 34679999999999999884 689999999999753333468899999997 999999999994 554444 689999
Q ss_pred EeeCCCCCC-ccceeeeecCcccCCCCccceEeecccCCCCCccccccccccccccceeEEeeec
Q psy7848 560 VLDDDKYGH-DFLGEARFPLNRLRPHISRDLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCF 623 (754)
Q Consensus 560 V~D~d~~g~-dfLGev~I~L~~L~~~~~~~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y 623 (754)
|||+|.++. +|||++.|||..|..+ ..+++|.... +. .-..|.|+|.+.|
T Consensus 572 V~D~D~~~~dd~iG~~~ipl~~L~~G---~r~v~L~d~~---------g~--~~~~~~L~v~i~~ 622 (624)
T 1djx_A 572 VEDYDSSSKNDFIGQSTIPWNSLKQG---YRHVHLLSKN---------GD--QHPSATLFVKISI 622 (624)
T ss_dssp EEECCSSSCCEEEEEEEEEGGGBCCE---EEEEEEECTT---------SC--EEEEEEEEEEEEE
T ss_pred EEEcCCCCCCceeEEEEEEHHHcCCC---cEEEeCCCCC---------cC--CCCceEEEEEEEE
Confidence 999999987 9999999999999764 2345553210 01 1235777777766
No 89
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.32 E-value=2.1e-12 Score=152.45 Aligned_cols=107 Identities=21% Similarity=0.340 Sum_probs=91.8
Q ss_pred cCCEEEEEEEEecCCCC---CCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeeccccCcceEEEE
Q psy7848 483 TTCSLHVTLHRAKGLRA---MDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSETDLSLQSLHIL 559 (754)
Q Consensus 483 ~~~~L~VtIi~ArnL~~---~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el~~~~L~~s 559 (754)
..+.|.|+|++|++|+. +|..|.+||||+|++.+... .+++|+++++|+||+|||+|.|. +.. .....|+|+
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~--~k~kTkvik~tlNPvWNEtF~F~-v~~--~~~~~L~~~ 90 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPD--SRKRTRHFNNDINPVWNETFEFI-LDP--NQENVLEIT 90 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTT--CCEECCCCTTCSSCEEEEEEEEE-ECT--TSCCBCEEE
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCC--CeEecceEcCCCCCeeeeEEEEE-ecC--CCCCEEEEE
Confidence 35789999999999999 88889999999999976432 67899999999999999999994 433 235789999
Q ss_pred EeeCCCCCCccceeeeecCcccCCCCccceEeecc
Q psy7848 560 VLDDDKYGHDFLGEARFPLNRLRPHISRDLCLNLC 594 (754)
Q Consensus 560 V~D~d~~g~dfLGev~I~L~~L~~~~~~~~~~~L~ 594 (754)
|||+|.+++++||++.|+|.+|..+.....|+.|.
T Consensus 91 V~D~D~~~ddfIG~v~I~L~~L~~g~~~~~w~~L~ 125 (749)
T 1cjy_A 91 LMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFN 125 (749)
T ss_dssp EEECCSSSCEEEEEECCBSTTSCTTCCCCEEEEET
T ss_pred EEECCCCCCceeEEEEEEHHHcCCCCceEEEEecC
Confidence 99999988899999999999998877677777775
No 90
>3bc1_B Synaptotagmin-like protein 2; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Homo sapiens}
Probab=99.23 E-value=1.6e-12 Score=103.59 Aligned_cols=40 Identities=35% Similarity=0.475 Sum_probs=35.5
Q ss_pred CCCHHHHHHHHHHHHhhHHHhHHHHHHHHHHHHHHHHhhh
Q psy7848 87 PLDPTEQEKIEEVIKRAEALDYIEQERVGRLVERVDNMKR 126 (754)
Q Consensus 87 ~Lt~~E~e~I~~Vl~R~~~l~~~E~~Ri~~L~~~l~~~k~ 126 (754)
.|+++|+++||+||+||++|+++|++||++|+++|.+.++
T Consensus 2 ~l~e~E~~~IL~VL~RD~~lr~~ee~RIrkLk~~l~~~~~ 41 (59)
T 3bc1_B 2 SPEFEEQEAIMKVLQRDAALKRAEEERVRHLPEKIKDDQQ 41 (59)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCCHHH
T ss_pred CCCHHHHHHHHHHHhhHHHHhhChHHHHHHHHHHhccHHH
Confidence 6899999999999999999999999999999887644443
No 91
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.18 E-value=1.5e-12 Score=148.00 Aligned_cols=97 Identities=15% Similarity=0.241 Sum_probs=12.8
Q ss_pred cceeeccccccccccCCCCCCCCceEEEEecCCCCcceeeeeeecCC---CCCccceeEEEEeecCccCCCeEEEEEEEc
Q psy7848 628 RALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKT---LNPIFNEEFAIETKITELSKQTLVITVWDK 704 (754)
Q Consensus 628 g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT~v~kkT---lNP~wNEtF~F~V~~~dL~~~~L~ItV~D~ 704 (754)
+.|.|+|++|+||+++| ||||++++. +....||+++++| +||+|||+|.|.+.+. ...|.|+|||.
T Consensus 11 ~~L~V~VieAk~L~~~d-----dpYv~v~l~---~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~---~~~L~v~V~d~ 79 (483)
T 3bxj_A 11 NVLKLWIIEARELPPKK-----RYYCELCLD---DMLYARTTSKPRSASGDTVFWGEHFEFNNLPA---VRALRLHLYRD 79 (483)
T ss_dssp ECC-----------------------------------------------------CCEECC------------------
T ss_pred cEEEEEEEEcCCcCCCC-----CCeEEEEEC---CeEEeeeeEEeCCCCCCCCccccEEEEecCCC---ccEEEEEEEec
Confidence 78999999999999886 999999993 2236799999999 9999999999986432 37899999994
Q ss_pred -c---CCCCCceeEEEEEecCCC--CchhhhHHhhhc
Q psy7848 705 -D---YGKSNDYLGCLELCCNSK--GDRLRHWVDMMK 735 (754)
Q Consensus 705 -d---~~~~ddfLG~v~L~l~s~--ge~~~hW~~ll~ 735 (754)
| .+++|+|||.+.|++... +...++||+|..
T Consensus 80 ~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~ 116 (483)
T 3bxj_A 80 SDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTL 116 (483)
T ss_dssp ---------------------------CCEECC----
T ss_pred CCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCC
Confidence 4 367899999999999873 345677888753
No 92
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.13 E-value=4.6e-12 Score=143.92 Aligned_cols=96 Identities=19% Similarity=0.269 Sum_probs=10.6
Q ss_pred CEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCC---CCCeeceeEEEeeeeccccCcceEEEEEe
Q psy7848 485 CSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRT---INPEFHEKLTFYSVSETDLSLQSLHILVL 561 (754)
Q Consensus 485 ~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~T---lNP~WnE~f~F~~I~~~el~~~~L~~sV~ 561 (754)
+.|.|+|++|++|+++| ||||++++.+ ....||+++.+| +||+|||+|.|..++. ...|.|.||
T Consensus 11 ~~L~V~VieAk~L~~~d-----dpYv~v~l~~----~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~----~~~L~v~V~ 77 (483)
T 3bxj_A 11 NVLKLWIIEARELPPKK-----RYYCELCLDD----MLYARTTSKPRSASGDTVFWGEHFEFNNLPA----VRALRLHLY 77 (483)
T ss_dssp ECC------------------------------------------------------CCEECC-----------------
T ss_pred cEEEEEEEEcCCcCCCC-----CCeEEEEECC----eEEeeeeEEeCCCCCCCCccccEEEEecCCC----ccEEEEEEE
Confidence 67999999999999987 9999999953 235689999999 9999999999964322 378999999
Q ss_pred eC-C---CCCC-ccceeeeecCcccCCCCccceEeec
Q psy7848 562 DD-D---KYGH-DFLGEARFPLNRLRPHISRDLCLNL 593 (754)
Q Consensus 562 D~-d---~~g~-dfLGev~I~L~~L~~~~~~~~~~~L 593 (754)
|. | +.++ +|||++.|++.++..+...+.|++|
T Consensus 78 d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L 114 (483)
T 3bxj_A 78 RDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPV 114 (483)
T ss_dssp -----------------------------CCEECC--
T ss_pred ecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEEC
Confidence 94 5 2455 9999999999999866554444444
No 93
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.00 E-value=4.3e-10 Score=134.57 Aligned_cols=104 Identities=19% Similarity=0.291 Sum_probs=80.4
Q ss_pred ccceeeccccccccccCCCCCCCCceEEEEecCCC--Ccceeeee-eecC-CCCCccce-eEEE-EeecCccCCCeEEEE
Q psy7848 627 KRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDL--HKRKYKTG-VKWK-TLNPIFNE-EFAI-ETKITELSKQTLVIT 700 (754)
Q Consensus 627 ~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~--~k~k~KT~-v~kk-TlNP~wNE-tF~F-~V~~~dL~~~~L~It 700 (754)
.+.|.|.|+.|++|+. +.+||||+|.+.+.. ...++||+ ++++ ++||+||| +|.| .|...++. .|.|.
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~--~Lr~~ 750 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELA--SLRVA 750 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGC--EEEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCcc--EEEEE
Confidence 3679999999999985 468999999997532 22378999 7764 69999999 6999 88766654 89999
Q ss_pred EEEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcce
Q psy7848 701 VWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKH 741 (754)
Q Consensus 701 V~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~i 741 (754)
|||++ |+|||.+.|++.....++. |..|...-+.++
T Consensus 751 V~D~d----~d~iG~~~ipl~~L~~G~r-~v~L~~~~g~~~ 786 (799)
T 2zkm_X 751 VMEEG----NKFLGHRIIPINALNSGYH-HLCLHSESNMPL 786 (799)
T ss_dssp EEETT----TEEEEEEEEEGGGBCCEEE-EEEEECTTCCEE
T ss_pred EEEeC----CCccceEeeehhhcCCCcE-EEeccCCCCCCC
Confidence 99987 7999999999998665554 445554444433
No 94
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.98 E-value=5.4e-10 Score=134.05 Aligned_cols=102 Identities=19% Similarity=0.276 Sum_probs=80.9
Q ss_pred cceeeccccccccccCCCCCCCCceEEEEecCCC--CcceeeeeeecC-CCCCccce-eEEEE-eecCccCCCeEEEEEE
Q psy7848 628 RALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDL--HKRKYKTGVKWK-TLNPIFNE-EFAIE-TKITELSKQTLVITVW 702 (754)
Q Consensus 628 g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~--~k~k~KT~v~kk-TlNP~wNE-tF~F~-V~~~dL~~~~L~ItV~ 702 (754)
..|.|.|+.|++|+.. .+||||+|.+.+.. ...++||+++++ ++||+||| +|.|. |...++ ..|.|.||
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pel--a~Lrf~V~ 798 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTL--ASLRIAAF 798 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGG--CEEEEEEE
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCc--CEEEEEEE
Confidence 3689999999999753 58999999997532 223689999876 59999999 69998 755554 48999999
Q ss_pred EccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCcc
Q psy7848 703 DKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHK 740 (754)
Q Consensus 703 D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ 740 (754)
|+| |+|||.+.|++.....++.| ..|+..-+.+
T Consensus 799 D~d----ddfiG~~~lpL~~L~~GyR~-vpL~~~~g~~ 831 (885)
T 3ohm_B 799 EEG----GKFVGHRILPVSAIRSGYHY-VCLRNEANQP 831 (885)
T ss_dssp ETT----TEEEEEEEEETTTCCCEEEE-EEEECTTSCE
T ss_pred cCC----ccEEeeEEEEHHHcCCCceE-EEecCCCCCc
Confidence 987 89999999999987777665 4565555554
No 95
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.97 E-value=6.7e-10 Score=132.51 Aligned_cols=104 Identities=14% Similarity=0.280 Sum_probs=83.0
Q ss_pred cceeeccccccccccCCCCCCCCceEEEEecCCCCc---ceeeeeeecC-CCCCcccee-EEEE-eecCccCCCeEEEEE
Q psy7848 628 RALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK---RKYKTGVKWK-TLNPIFNEE-FAIE-TKITELSKQTLVITV 701 (754)
Q Consensus 628 g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k---~k~KT~v~kk-TlNP~wNEt-F~F~-V~~~dL~~~~L~ItV 701 (754)
+.|.|.|+.|++|+.. .+||||+|.+.+.... .++||+++++ ++||+|||+ |.|. |...++ ..|.|.|
T Consensus 650 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pel--a~Lrf~V 723 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDL--AVVRIIV 723 (816)
T ss_dssp EEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGG--CEEEEEE
T ss_pred eEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCc--cEEEEEE
Confidence 5799999999999753 5899999999753221 4789999886 599999998 9998 765555 5899999
Q ss_pred EEccCCCCCceeEEEEEecCCCCchhhhHHhhhcCCCccee
Q psy7848 702 WDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHE 742 (754)
Q Consensus 702 ~D~d~~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~P~~~ie 742 (754)
||++ |+|||.+.|+++....++.| ..|+..-|.+..
T Consensus 724 ~D~d----ddfiG~~~ipL~~L~~GyR~-vpL~~~~g~~~~ 759 (816)
T 3qr0_A 724 SEEN----GKFIGHRVMPLDGIKPGYRH-VPLRNESNRPLG 759 (816)
T ss_dssp EETT----SCEEEEEEEESTTCCCEEEE-EEEECTTSCEEE
T ss_pred EecC----CCeeeEEEEEHHHcCCcceE-EEEeCCCCCCCC
Confidence 9985 79999999999987777765 456655555543
No 96
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.91 E-value=3.8e-09 Score=126.74 Aligned_cols=117 Identities=20% Similarity=0.283 Sum_probs=85.3
Q ss_pred CEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCC-CCceEEEeeeecC-CCCCeece-eEEEeeeeccccCcceEEEEEe
Q psy7848 485 CSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLT-KTSHRLRTKTCLR-TINPEFHE-KLTFYSVSETDLSLQSLHILVL 561 (754)
Q Consensus 485 ~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~-~~~~~~rTkvi~~-TlNP~WnE-~f~F~~I~~~el~~~~L~~sV~ 561 (754)
..|.|+|+.|++|+.. .+||||+|.+.+.. ....+++|+++.+ ++||+||| +|.|..|...++ ..|+|.||
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pel--a~Lrf~V~ 798 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTL--ASLRIAAF 798 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGG--CEEEEEEE
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCc--CEEEEEEE
Confidence 3699999999999853 58999999997522 1123579999876 59999999 699954554544 47999999
Q ss_pred eCCCCCCccceeeeecCcccCCCCccceEeecccCCCCCccccccccccccccceeEEeeecc
Q psy7848 562 DDDKYGHDFLGEARFPLNRLRPHISRDLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCFS 624 (754)
Q Consensus 562 D~d~~g~dfLGev~I~L~~L~~~~~~~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y~ 624 (754)
|+| ++|||++.|||..|..+ ...++|.... ...-..|.|.|.+.+.
T Consensus 799 D~d---ddfiG~~~lpL~~L~~G---yR~vpL~~~~-----------g~~l~~atLfv~i~~~ 844 (885)
T 3ohm_B 799 EEG---GKFVGHRILPVSAIRSG---YHYVCLRNEA-----------NQPLCLPALLIYTEAS 844 (885)
T ss_dssp ETT---TEEEEEEEEETTTCCCE---EEEEEEECTT-----------SCEEEEEEEEEEEEEE
T ss_pred cCC---ccEEeeEEEEHHHcCCC---ceEEEecCCC-----------CCccCceEEEEEEEEE
Confidence 987 69999999999999764 2234453210 0123467888777664
No 97
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.91 E-value=5.1e-09 Score=124.97 Aligned_cols=91 Identities=21% Similarity=0.452 Sum_probs=74.0
Q ss_pred CEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCc--eEEEeeeecC-CCCCeecee-EEEeeeeccccCcceEEEEE
Q psy7848 485 CSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTS--HRLRTKTCLR-TINPEFHEK-LTFYSVSETDLSLQSLHILV 560 (754)
Q Consensus 485 ~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~--~~~rTkvi~~-TlNP~WnE~-f~F~~I~~~el~~~~L~~sV 560 (754)
..|.|+|+.|++|+.. .+||||+|.+.+..... .+++|+++.+ ++||+|||+ |.|..|...++ ..|+|.|
T Consensus 650 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pel--a~Lrf~V 723 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDL--AVVRIIV 723 (816)
T ss_dssp EEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGG--CEEEEEE
T ss_pred eEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCc--cEEEEEE
Confidence 5799999999999853 58999999997532222 5789999886 699999998 99953555555 5899999
Q ss_pred eeCCCCCCccceeeeecCcccCCC
Q psy7848 561 LDDDKYGHDFLGEARFPLNRLRPH 584 (754)
Q Consensus 561 ~D~d~~g~dfLGev~I~L~~L~~~ 584 (754)
||++ ++|||++.|||..|..+
T Consensus 724 ~D~d---ddfiG~~~ipL~~L~~G 744 (816)
T 3qr0_A 724 SEEN---GKFIGHRVMPLDGIKPG 744 (816)
T ss_dssp EETT---SCEEEEEEEESTTCCCE
T ss_pred EecC---CCeeeEEEEEHHHcCCc
Confidence 9985 58999999999999764
No 98
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.88 E-value=6.6e-09 Score=124.33 Aligned_cols=91 Identities=26% Similarity=0.468 Sum_probs=72.7
Q ss_pred CEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCC-CCceEEEee-eec-CCCCCeece-eEEEeeeeccccCcceEEEEE
Q psy7848 485 CSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLT-KTSHRLRTK-TCL-RTINPEFHE-KLTFYSVSETDLSLQSLHILV 560 (754)
Q Consensus 485 ~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~-~~~~~~rTk-vi~-~TlNP~WnE-~f~F~~I~~~el~~~~L~~sV 560 (754)
+.|.|+|+.|++|+. +.+||||+|.+.+.. ....++||+ ++. +++||+||| +|.|..|...++ ..|+|.|
T Consensus 678 ~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el--~~Lr~~V 751 (799)
T 2zkm_X 678 TTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPEL--ASLRVAV 751 (799)
T ss_dssp EEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGG--CEEEEEE
T ss_pred eeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCc--cEEEEEE
Confidence 579999999999985 468999999996522 112468999 776 469999999 699943555555 4899999
Q ss_pred eeCCCCCCccceeeeecCcccCCC
Q psy7848 561 LDDDKYGHDFLGEARFPLNRLRPH 584 (754)
Q Consensus 561 ~D~d~~g~dfLGev~I~L~~L~~~ 584 (754)
||+| ++|||++.|||..|..+
T Consensus 752 ~D~d---~d~iG~~~ipl~~L~~G 772 (799)
T 2zkm_X 752 MEEG---NKFLGHRIIPINALNSG 772 (799)
T ss_dssp EETT---TEEEEEEEEEGGGBCCE
T ss_pred EEeC---CCccceEeeehhhcCCC
Confidence 9997 59999999999999754
No 99
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=98.78 E-value=1.9e-09 Score=84.56 Aligned_cols=55 Identities=22% Similarity=0.637 Sum_probs=49.4
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETRE 197 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~re 197 (754)
....|.+|.++.+ .++.|+.|.+|+.++|.+||.+.+ ...+..+|.|++|++++|
T Consensus 8 d~~~C~iC~KTKF--------ADG~Gh~C~yCk~r~CaRCGg~v~-lr~~k~~WvC~lC~k~qe 62 (62)
T 2a20_A 8 DAPTCGICHKTKF--------ADGCGHNCSYCQTKFCARCGGRVS-LRSNKVMWVCNLCRKQQE 62 (62)
T ss_dssp CCCCCSSSSCSCC--------CSSCCEEBTTTCCEECTTSEEEEE-SSTTCEEEEEHHHHHHTC
T ss_pred Ccchhhhhcccee--------ccCCCccccccCCeeecccCCEee-ecCCeEEEEehhhhhccC
Confidence 4589999999998 999999999999999999999997 344677999999999875
No 100
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.50 E-value=6.2e-07 Score=83.56 Aligned_cols=113 Identities=14% Similarity=0.224 Sum_probs=79.4
Q ss_pred CEEEEEEEEecCCCCCC-CCCCCCcEEEEEEeCCCCCceEEEe-eeecCCCCCeeceeEEEeeeeccccCcceEEEEEee
Q psy7848 485 CSLHVTLHRAKGLRAMD-IHGTSDPFCKLNLVPLTKTSHRLRT-KTCLRTINPEFHEKLTFYSVSETDLSLQSLHILVLD 562 (754)
Q Consensus 485 ~~L~VtIi~ArnL~~~d-~~g~sDPYVkv~Llp~~~~~~~~rT-kvi~~TlNP~WnE~f~F~~I~~~el~~~~L~~sV~D 562 (754)
.-|+|.+.++.-.+.+. .....||||.|.+.... .....+| .++.+|..|+|||.|.-+ |. ..+.|+|.|+|
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~-~te~gqtl~~KkkT~~P~Wne~Fd~~-V~----~Gr~l~i~Vfh 83 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYV-ESENGQMYIQKKPTMYPPWDSTFDAH-IN----KGRVMQIIVKG 83 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEE-EETTEEEEEEEEEEECCCSSSEEEEC-CC----SSCEEEEEEEC
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeeee-eccCceeecccCCCCCccccceEeee-EE----CCeEEEEEEEc
Confidence 34666666655433332 23468999999985310 0122667 667789999999999863 32 24899999997
Q ss_pred CCCCCCccceeeeecCcccC-----CCCccceEeecccCCCCCccccccccccccccceeEEeeecc
Q psy7848 563 DDKYGHDFLGEARFPLNRLR-----PHISRDLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCFS 624 (754)
Q Consensus 563 ~d~~g~dfLGev~I~L~~L~-----~~~~~~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y~ 624 (754)
... +||..+.|++.+|. .+...++|+.| +..|+|++.+.|.
T Consensus 84 ~a~---~fVAn~tV~~edL~~~ck~~~g~~e~WvdL------------------eP~Gkl~v~i~~~ 129 (138)
T 2enj_A 84 KNV---DLISETTVELYSLAERCRKNNGKTEIWLEL------------------KPQGRMLMNARYF 129 (138)
T ss_dssp SSC---SCCEEEEEESHHHHHHHHHTTTCEEEEEEC------------------BSSCEEEEEEEEC
T ss_pred CCC---CeeeEEEEEHHHHHhhhccCCCceEEEEec------------------ccCcEEEEEEEEE
Confidence 555 89999999999997 33344677666 3589999999885
No 101
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.49 E-value=7e-07 Score=82.15 Aligned_cols=113 Identities=13% Similarity=0.230 Sum_probs=79.2
Q ss_pred CEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEe-eeecCCCCCeeceeEEEeeeeccccCcceEEEEEeeC
Q psy7848 485 CSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRT-KTCLRTINPEFHEKLTFYSVSETDLSLQSLHILVLDD 563 (754)
Q Consensus 485 ~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rT-kvi~~TlNP~WnE~f~F~~I~~~el~~~~L~~sV~D~ 563 (754)
.-|+|.+.++.--+.+......||||.|.+..... ....+| .+..+|..|+|||.|.-+ |. ..+.|+|.|+|.
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~-~e~g~t~~~K~kT~~P~Wne~Fd~~-V~----~Gr~l~i~Vfh~ 79 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALS-TERGKTLVQKKPTMYPEWKSTFDAH-IY----EGRVIQIVLMRA 79 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEE-ETTEEEEECCSCCBCCCTTCEEEEE-CC----TTCEEEEEEEEE
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEE-cccceeecccCCCCCcCccceEEee-ee----CCEEEEEEEEcC
Confidence 45777776654322222334689999999853110 112355 667889999999999863 33 248999999976
Q ss_pred CCCCCccceeeeecCcccCC-----CCccceEeecccCCCCCccccccccccccccceeEEeeecc
Q psy7848 564 DKYGHDFLGEARFPLNRLRP-----HISRDLCLNLCKHYPVPREEEVWGEEECWQHGKIFLTLCFS 624 (754)
Q Consensus 564 d~~g~dfLGev~I~L~~L~~-----~~~~~~~~~L~~~~~l~~~~~~~~~~~~~~~GeL~VsL~y~ 624 (754)
.. +||+.+.|++.+|.. +...++|+.| +..|+|++.+.|.
T Consensus 80 a~---~fvAn~tV~~edL~~~c~~~~g~~e~WvdL------------------eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 80 AE---EPVSEVTVGVSVLAERCKKNNGKAEFWLDL------------------QPQAKVLMSVQYF 124 (126)
T ss_dssp TT---EEEEEEEEEHHHHHHHHHTTTTEEEEEEEC------------------BSSCEEEEEEEEE
T ss_pred CC---CeeeEEEEEHHHHHhhhccCCCceEEEEec------------------ccCcEEEEEEEEe
Confidence 65 999999999999973 3344567666 4589999998875
No 102
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.23 E-value=3.2e-06 Score=77.81 Aligned_cols=104 Identities=14% Similarity=0.105 Sum_probs=70.8
Q ss_pred ceeeccccccccccCCCCCCCCceEEEEecCCCCcceeee-eeecCCCCCccceeEEEEeecCccCCCeEEEEEEEccCC
Q psy7848 629 ALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKT-GVKWKTLNPIFNEEFAIETKITELSKQTLVITVWDKDYG 707 (754)
Q Consensus 629 ~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~k~KT-~v~kkTlNP~wNEtF~F~V~~~dL~~~~L~ItV~D~d~~ 707 (754)
.|+|.+.++.--.-+......||||.|.+.........+| ..+++|..|+||+.|.-.|. ....|.|.|++...
T Consensus 7 flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~----~Gr~l~i~Vfh~a~- 81 (126)
T 1yrk_A 7 FLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIY----EGRVIQIVLMRAAE- 81 (126)
T ss_dssp EEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECC----TTCEEEEEEEEETT-
T ss_pred cEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeee----CCEEEEEEEEcCCC-
Confidence 3455554433211122334689999999842110013365 77889999999999999986 35899999996544
Q ss_pred CCCceeEEEEEecCCCCchhhhHHhhhcC---CCcceeeEEeecCC
Q psy7848 708 KSNDYLGCLELCCNSKGDRLRHWVDMMKY---PDHKHEGIHNLSIK 750 (754)
Q Consensus 708 ~~ddfLG~v~L~l~s~ge~~~hW~~ll~~---P~~~ie~Wh~L~~~ 750 (754)
+|+..|.|++. +|+++ .+...+.|..|+|.
T Consensus 82 ---~fvAn~tV~~e----------dL~~~c~~~~g~~e~WvdLeP~ 114 (126)
T 1yrk_A 82 ---EPVSEVTVGVS----------VLAERCKKNNGKAEFWLDLQPQ 114 (126)
T ss_dssp ---EEEEEEEEEHH----------HHHHHHHTTTTEEEEEEECBSS
T ss_pred ---CeeeEEEEEHH----------HHHhhhccCCCceEEEEecccC
Confidence 99999999986 34433 45677899888874
No 103
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.15 E-value=3.6e-06 Score=78.42 Aligned_cols=104 Identities=14% Similarity=0.113 Sum_probs=70.7
Q ss_pred ceeeccccccccccCC-CCCCCCceEEEEecCCCCcceeee-eeecCCCCCccceeEEEEeecCccCCCeEEEEEEEccC
Q psy7848 629 ALIVNLIKCTNLIPMD-SNGFSDPFIKLYLKPDLHKRKYKT-GVKWKTLNPIFNEEFAIETKITELSKQTLVITVWDKDY 706 (754)
Q Consensus 629 ~L~V~V~~A~nL~~~d-~~G~sDPYVKV~L~~~~~k~k~KT-~v~kkTlNP~wNEtF~F~V~~~dL~~~~L~ItV~D~d~ 706 (754)
.|+|.+.+..-.+-+. .....||||.|.+...-.....+| ..+++|..|+||+.|.-.|. ....|.|.|++...
T Consensus 11 flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~----~Gr~l~i~Vfh~a~ 86 (138)
T 2enj_A 11 FLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHIN----KGRVMQIIVKGKNV 86 (138)
T ss_dssp CEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCC----SSCEEEEEEECSSC
T ss_pred ceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEE----CCeEEEEEEEcCCC
Confidence 4455554443322222 233689999999842110013677 77888999999999988886 35889999995433
Q ss_pred CCCCceeEEEEEecCCCCchhhhHHhhhcC---CCcceeeEEeecCC
Q psy7848 707 GKSNDYLGCLELCCNSKGDRLRHWVDMMKY---PDHKHEGIHNLSIK 750 (754)
Q Consensus 707 ~~~ddfLG~v~L~l~s~ge~~~hW~~ll~~---P~~~ie~Wh~L~~~ 750 (754)
+||..|.|.+. +|+++ .+...+-|..|+|.
T Consensus 87 ----~fVAn~tV~~e----------dL~~~ck~~~g~~e~WvdLeP~ 119 (138)
T 2enj_A 87 ----DLISETTVELY----------SLAERCRKNNGKTEIWLELKPQ 119 (138)
T ss_dssp ----SCCEEEEEESH----------HHHHHHHHTTTCEEEEEECBSS
T ss_pred ----CeeeEEEEEHH----------HHHhhhccCCCceEEEEecccC
Confidence 89999999987 34433 35677888888773
No 104
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=96.61 E-value=0.006 Score=56.43 Aligned_cols=54 Identities=24% Similarity=0.660 Sum_probs=43.0
Q ss_pred cccccccccccCCCccccccccCCCCcccccccccccccccccccc-CCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVS-ASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~-~~~~~~~WlC~vC~~~ 195 (754)
....|..|+..|+ +..+.+-|..|++-||..|...... .....+.-+|..|...
T Consensus 68 ~~~~C~~C~~~Fs--------~~~RrHHCR~CG~vfC~~Cs~~~~~~p~~~~p~RVC~~C~~~ 122 (125)
T 1joc_A 68 EVQNCMACGKGFS--------VTVRRHHCRQCGNIFCAECSAKNALTPSSKKPVRVCDACFND 122 (125)
T ss_dssp GCCBCTTTCCBCC--------SSSCCEECTTTCCEECGGGSCEEECCTTCSSCEEECHHHHHH
T ss_pred CCCCCcCcCCccc--------cccccccCCCCCeEEChHHhCCccccCCCCCCCEeCHHHHHH
Confidence 3478999999999 5567999999999999999876521 1224678999999864
No 105
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=94.05 E-value=0.019 Score=47.96 Aligned_cols=55 Identities=31% Similarity=0.621 Sum_probs=42.5
Q ss_pred ccccccccccCCCccccccccCCCCcccccccccccccccccc---ccCCCCCCceeeccchhhhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIES---VSASKKENIWLCKICAETRE 197 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~---~~~~~~~~~WlC~vC~~~re 197 (754)
...|..|++.|+ +..+.+-|..|++-+|.+|.... +..+..++.-+|..|...-+
T Consensus 11 ~~~C~~C~~~F~--------~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 68 (73)
T 1vfy_A 11 SDACMICSKKFS--------LLNRKHHCRSCGGVFCQEHSSNSIPLPDLGIYEPVRVCDSCFEDYE 68 (73)
T ss_dssp CSBCTTTCCBCB--------TTBCCEECTTTCCEECGGGSCEEEEEGGGTEEEEEEECHHHHHHHH
T ss_pred CCcccCCCCccC--------CccccccCCCCCEEEcccccCCeEEcccCCCCCCCEECHHHHHHHH
Confidence 368999999999 55779999999999999998643 21111356799999987654
No 106
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=93.90 E-value=0.031 Score=47.73 Aligned_cols=54 Identities=22% Similarity=0.568 Sum_probs=43.0
Q ss_pred ccccccccccCCCccccccccCCCCccccccccccccccccccc-cCCCCCCceeeccchhhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESV-SASKKENIWLCKICAETR 196 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~-~~~~~~~~WlC~vC~~~r 196 (754)
...|..|++.|+ +..+.+-|..|++-+|..|..... ......+.-+|..|...-
T Consensus 19 ~~~C~~C~~~Fs--------~~~RrHHCR~CG~v~C~~Cs~~~~~l~~~~~~~RVC~~C~~~l 73 (82)
T 2yw8_A 19 ATHCRQCEKEFS--------ISRRKHHCRNCGHIFCNTCSSNELALPSYPKPVRVCDSCHTLL 73 (82)
T ss_dssp CCBCTTTCCBCB--------TTBCCEECTTTCCEECSGGGCEEECCTTCSSCEEECHHHHHHT
T ss_pred CCcccCcCCccc--------CccccccCCCCCCEEChHHhCCeeecCCCCCcCEECHHHHHHH
Confidence 478999999999 566799999999999999987542 112246789999998753
No 107
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=93.29 E-value=0.028 Score=48.16 Aligned_cols=55 Identities=24% Similarity=0.463 Sum_probs=42.5
Q ss_pred cccccccccccCCCccccccccCCCCcccccccccccccccccc---ccCCCCCCceeeccchhhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIES---VSASKKENIWLCKICAETR 196 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~---~~~~~~~~~WlC~vC~~~r 196 (754)
....|..|++.|+ +..+.+-|..|.+-||.+|.... +......+.-+|..|...-
T Consensus 20 ~~~~C~~C~~~Fs--------~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 77 (84)
T 1z2q_A 20 DAPACNGCGCVFT--------TTVRRHHCRNCGYVLCGDCSRHRAAIPMRGITEPERVCDACYLAL 77 (84)
T ss_dssp TCCBCTTTCCBCC--------TTSCCEECTTTCCEECTGGGCCEEEETTTTEEEEEECCHHHHHHH
T ss_pred CCCCCcCcCCccc--------cchhcccccCCCcEEChHHhCCeEeccCCCCCCCCEECHHHHHHH
Confidence 3578999999999 55779999999999999998764 2111135578999998754
No 108
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=93.26 E-value=0.027 Score=51.63 Aligned_cols=49 Identities=29% Similarity=0.718 Sum_probs=39.3
Q ss_pred ccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETR 196 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~r 196 (754)
...|..|+..|+ +..+.+.|..|++-+|.+|..... ...-+|..|....
T Consensus 19 ~~~C~~C~~~Fs--------~~~RkHHCR~CG~ifC~~Cs~~~~-----~~vRVC~~C~~~~ 67 (120)
T 1y02_A 19 EPSCKSCGAHFA--------NTARKQTCLDCKKNFCMTCSSQVG-----NGPRLCLLCQRFR 67 (120)
T ss_dssp -CCCTTTCCCCS--------SGGGCEECTTTCCEECGGGEEC---------CCEEHHHHHHH
T ss_pred cCcccCcCCccc--------cccccccCCCCCCeeCHHHhCCCC-----CCceECHHHHHHH
Confidence 478999999999 456799999999999999988764 3588999998763
No 109
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=93.14 E-value=0.036 Score=48.18 Aligned_cols=54 Identities=26% Similarity=0.548 Sum_probs=42.4
Q ss_pred ccccccccccCCCccccccccCCCCcccccccccccccccccccc-CCCCCCceeeccchhhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVS-ASKKENIWLCKICAETR 196 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~-~~~~~~~WlC~vC~~~r 196 (754)
...|..|++.|+ +..+.+.|..|+.-||..|...... .....+.-+|..|...-
T Consensus 20 ~~~C~~C~~~F~--------~~~RrhhCr~CG~v~C~~Cs~~~~~l~~~~~~~RVC~~C~~~l 74 (90)
T 3t7l_A 20 APNCMNCQVKFT--------FTKRRHHCRACGKVFCGVCCNRKCKLQYLEKEARVCVVCYETI 74 (90)
T ss_dssp CCBCTTTCCBCC--------SSSCCEECTTTCCEECGGGSCEEEEETTTTEEEEECHHHHHHH
T ss_pred CCcCcCCCCccc--------chhhCccccCCCCEECCcccCCeeecCCCCCCCeECHHHHHHH
Confidence 478999999999 5567999999999999999887531 11124578999998754
No 110
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=92.55 E-value=0.053 Score=46.93 Aligned_cols=55 Identities=24% Similarity=0.440 Sum_probs=42.5
Q ss_pred cccccccccccCCCccccccccCCCCcccccccccccccccccccc--CCCCCCceeeccchhhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVS--ASKKENIWLCKICAETR 196 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~--~~~~~~~WlC~vC~~~r 196 (754)
....|..|++.|+ +..+.+-|..|.+-+|..|...... .....+.-+|..|....
T Consensus 8 ~~~~C~~C~~~F~--------~~~RrHHCR~CG~vfC~~Cs~~~~~lp~~g~~~~RVC~~C~~~l 64 (88)
T 1wfk_A 8 MESRCYGCAVKFT--------LFKKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQCHTIL 64 (88)
T ss_dssp CCSBCTTTCCBCC--------SSSCEEECSSSCCEEETTTSCEEEEETTTTSEEEEECHHHHHHH
T ss_pred cCCCCcCcCCccc--------CccccccCCCCCCEEChhHcCCceeccccCCCcCEECHHHHHHH
Confidence 4578999999999 5577999999999999999876321 01124678999998754
No 111
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=92.00 E-value=0.042 Score=55.83 Aligned_cols=54 Identities=22% Similarity=0.537 Sum_probs=42.1
Q ss_pred cccccccccccCCCccccccccCCCCcccccccccccccccccccc---CCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVS---ASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~---~~~~~~~WlC~vC~~~ 195 (754)
....|..|++.|+ +..+.+-|..|++-+|.+|...... .....+.-+|..|...
T Consensus 163 ~~~~C~~C~~~F~--------~~~RrhHCR~CG~v~C~~Cs~~~~~~p~~~~~~~~RVC~~C~~~ 219 (226)
T 3zyq_A 163 DAEECHRCRVQFG--------VMTRKHHCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEQ 219 (226)
T ss_dssp CCSBCTTTCCBCB--------TTBCCEECTTTCCEECTTTCCEEEEEGGGTEEEEEEECHHHHHH
T ss_pred cCCCCcCcCCCCC--------ccccccccCCCcCEeChhhcCCcccCCCCCCCCCCEeCHHHHHH
Confidence 4469999999999 5567999999999999999875421 1113467899999874
No 112
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.80 E-value=0.092 Score=44.92 Aligned_cols=54 Identities=26% Similarity=0.640 Sum_probs=41.4
Q ss_pred ccccccccccCCCccccccccCCCCcccccccccccccccccccc---CC------CCCCceeeccchhhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVS---AS------KKENIWLCKICAETR 196 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~---~~------~~~~~WlC~vC~~~r 196 (754)
...|..|++.|+ +..+.+-|..|.+-+|.+|...... .. ...+.=+|..|...-
T Consensus 14 ~~~C~~C~~~F~--------~~~RrHHCR~CG~vfC~~Cs~~~~~l~~~g~~~p~~~~~~~RVC~~C~~~l 76 (84)
T 1x4u_A 14 FGNCTGCSATFS--------VLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVCASCNQTL 76 (84)
T ss_dssp CSSCSSSCCCCC--------SSSCCEECSSSCCEECTTTSCEEECSTTTSCCCSSCSSCCEEECHHHHHHH
T ss_pred CCcCcCcCCccc--------cchhhhhhcCCCcEEChhhcCCceecccccccCccccCCccEECHHHHHHH
Confidence 478999999999 5577999999999999999865321 00 014577999998753
No 113
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=91.77 E-value=0.054 Score=54.73 Aligned_cols=54 Identities=19% Similarity=0.570 Sum_probs=42.2
Q ss_pred cccccccccccCCCccccccccCCCCcccccccccccccccccccc---CCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVS---ASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~---~~~~~~~WlC~vC~~~ 195 (754)
....|..|++.|+ +..+.+-|..|++-||..|...... .+...+.-+|..|...
T Consensus 160 ~~~~C~~C~~~F~--------~~~rrhhCr~CG~v~C~~Cs~~~~~~~~~~~~~~~RvC~~C~~~ 216 (220)
T 1dvp_A 160 DGRVCHRCRVEFT--------FTNRKHHCRNCGQVFCGQCTAKQCPLPKYGIEKEVRVCDGCFAA 216 (220)
T ss_dssp CCSBCTTTCCBCC--------SSSCCEECTTTCCEECSTTSCEEEEEGGGTEEEEEEECHHHHHH
T ss_pred CCCccCCCCCccC--------CcccccccCCcCCEEChHHhCCeeecCcCCCCCCCEeCHHHHHH
Confidence 3589999999999 5667999999999999999876421 1113457899999864
No 114
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=90.96 E-value=0.41 Score=58.06 Aligned_cols=93 Identities=9% Similarity=0.098 Sum_probs=67.0
Q ss_pred ccceeeccccccccccCCCCCCCCceEEEEecCCCCc--ceeeeeeecCCCCCccceeEEEEeecCccC-CCeEEEEEEE
Q psy7848 627 KRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK--RKYKTGVKWKTLNPIFNEEFAIETKITELS-KQTLVITVWD 703 (754)
Q Consensus 627 ~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k--~k~KT~v~kkTlNP~wNEtF~F~V~~~dL~-~~~L~ItV~D 703 (754)
...+.|.|..+.++... ..++-||.+.+..++.. ....|..+....+|.|||.+.|++...+|. +..|.|+||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 46888999999988643 45788999988755422 144565555577899999999999888886 4679999999
Q ss_pred ccCC--C----------CCceeEEEEEecCC
Q psy7848 704 KDYG--K----------SNDYLGCLELCCNS 722 (754)
Q Consensus 704 ~d~~--~----------~ddfLG~v~L~l~s 722 (754)
...- + ....||.+.+.+-.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd 323 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFD 323 (940)
T ss_dssp EC----------------CEEEEEEEEESBC
T ss_pred ecCCccCccccccccccccceEEEEeeeEEC
Confidence 6431 1 24589999999764
No 115
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=90.43 E-value=1.7 Score=43.80 Aligned_cols=58 Identities=16% Similarity=0.232 Sum_probs=47.1
Q ss_pred ceeeeeeecCCCCCccceeEEEEeecCccCCCeEEEEEEEccCC----CCCceeEEEEEecC
Q psy7848 664 RKYKTGVKWKTLNPIFNEEFAIETKITELSKQTLVITVWDKDYG----KSNDYLGCLELCCN 721 (754)
Q Consensus 664 ~k~KT~v~kkTlNP~wNEtF~F~V~~~dL~~~~L~ItV~D~d~~----~~ddfLG~v~L~l~ 721 (754)
..++|.|..++.+|.|+|+|-+.|+.+...+..|.|+++....- ..+..+|-..|+|-
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 38899999999999999999999998888889999999865421 22346788888864
No 116
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=90.42 E-value=1.8 Score=43.59 Aligned_cols=59 Identities=12% Similarity=0.174 Sum_probs=46.6
Q ss_pred ceEEEeeeecCCCCCeeceeEEEeeeeccccCcceEEEEEeeCCCC----CC-ccceeeeecCcc
Q psy7848 521 SHRLRTKTCLRTINPEFHEKLTFYSVSETDLSLQSLHILVLDDDKY----GH-DFLGEARFPLNR 580 (754)
Q Consensus 521 ~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el~~~~L~~sV~D~d~~----g~-dfLGev~I~L~~ 580 (754)
...++|-|...+.+|.|+|++.+ .++.+.....-|.|++++.... .. ..+|-+.+||-+
T Consensus 76 ~se~~S~V~YHnk~P~w~EtIKi-~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 76 ISEYKSVIYYQVKQPRWFETVKV-AIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp BSCEECCCCTTCSSCCCCEEEEE-EECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred ceeEEEEEEEcCCCCCceEeEEE-eeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 35678889999999999999998 5888888889999999986432 11 467777777753
No 117
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=89.12 E-value=0.9 Score=55.65 Aligned_cols=94 Identities=13% Similarity=0.085 Sum_probs=66.7
Q ss_pred ccceeeccccccccccCCCCCCCCceEEEEecCCCCcc--eeeeeeecCCCCCccceeEEEEeecCccCC-CeEEEEEEE
Q psy7848 627 KRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKR--KYKTGVKWKTLNPIFNEEFAIETKITELSK-QTLVITVWD 703 (754)
Q Consensus 627 ~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~--k~KT~v~kkTlNP~wNEtF~F~V~~~dL~~-~~L~ItV~D 703 (754)
...+.|.|..+.++... .....+.||.+.+..++..- ...|..+. ..+|.|||.++|+|...+|.. ..|-|+||+
T Consensus 354 ~~~f~v~i~~~~~~n~~-~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVN-IRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCC-CSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCC-ccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 36788999888887543 33357899999998654332 44555443 457889999999998888864 679999998
Q ss_pred ccCC----CCCceeEEEEEecCC
Q psy7848 704 KDYG----KSNDYLGCLELCCNS 722 (754)
Q Consensus 704 ~d~~----~~ddfLG~v~L~l~s 722 (754)
.... ..+..||.+.+.+-+
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd 454 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFD 454 (1091)
T ss_dssp CCCCC-------CCEEEEEESBC
T ss_pred ecCccCcccccceeEEeeeeeEc
Confidence 6542 134579999999764
No 118
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=88.09 E-value=0.82 Score=55.57 Aligned_cols=94 Identities=14% Similarity=0.090 Sum_probs=62.8
Q ss_pred cceeeccccccccccCCCCCCCCceEEEEecCCCCcc-eeeeeeecCCCCCccceeEEEEeecCccC-CCeEEEEEEEcc
Q psy7848 628 RALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKR-KYKTGVKWKTLNPIFNEEFAIETKITELS-KQTLVITVWDKD 705 (754)
Q Consensus 628 g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~-k~KT~v~kkTlNP~wNEtF~F~V~~~dL~-~~~L~ItV~D~d 705 (754)
..+.|.|..+.... ...+..++.||.+.+..++... ...|..+.-+.+|.|||.++|++...+|. +..|.|+||+..
T Consensus 218 ~~f~i~i~~~~~~~-~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPV-LPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSS-CCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeeccccc-ccCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 45667777665421 1123457889999887543222 44566555566899999999999888886 467999999864
Q ss_pred CCC----------------CCceeEEEEEecCC
Q psy7848 706 YGK----------------SNDYLGCLELCCNS 722 (754)
Q Consensus 706 ~~~----------------~ddfLG~v~L~l~s 722 (754)
..+ ....||.+.+.+-+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd 329 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLID 329 (961)
T ss_dssp C--------------------CEEEEEEEESBC
T ss_pred cCccccccccccccccccccceeEEEEeeeeec
Confidence 321 34589999998654
No 119
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=87.27 E-value=0.11 Score=57.24 Aligned_cols=53 Identities=26% Similarity=0.547 Sum_probs=0.0
Q ss_pred ccccccccccCCCccccccccCCCCcccccccccccccccccccc--CCCCCCceeeccchhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVS--ASKKENIWLCKICAET 195 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~--~~~~~~~WlC~vC~~~ 195 (754)
...|..|+.+|+ +..+.+.|..|++-+|.+|...... .....+.=+|..|...
T Consensus 375 ~~~c~~c~~~f~--------~~~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~~~~~rvC~~C~~~ 429 (434)
T 3mpx_A 375 VMMCMNCGCDFS--------LTLRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFGE 429 (434)
T ss_dssp ---------------------------------------------------------------
T ss_pred CCcCCCcCCCCC--------CcchhhhcccCcCEeehhhCCCeeeCCCCCCCcCEecHHHHHH
Confidence 478999999999 4556999999999999999864321 0112456789999864
No 120
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=86.77 E-value=0.38 Score=52.60 Aligned_cols=38 Identities=16% Similarity=0.245 Sum_probs=32.9
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccc
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESV 178 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~ 178 (754)
....|..|+..|. -+...|..|..|+..||.+|....+
T Consensus 356 ~~t~C~~C~~~~~-------g~~~qg~~C~~C~~~~h~~C~~~~~ 393 (406)
T 2vrw_B 356 ETTSCKACQMLLR-------GTFYQGYRCYRCRAPAHKECLGRVP 393 (406)
T ss_dssp SCCBCTTTCCBCC-------SSSSCEEEETTTCCEECGGGGGGSC
T ss_pred CCCCCccccchhc-------eeCCCCCCCCCCcCccchhhhhhCC
Confidence 4589999999994 2677899999999999999998774
No 121
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=86.60 E-value=3.8 Score=50.28 Aligned_cols=97 Identities=13% Similarity=0.144 Sum_probs=67.8
Q ss_pred cCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCC-ceEEEeeeecCCCCCeeceeEEEeeeeccccC-cceEEEEE
Q psy7848 483 TTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKT-SHRLRTKTCLRTINPEFHEKLTFYSVSETDLS-LQSLHILV 560 (754)
Q Consensus 483 ~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~-~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el~-~~~L~~sV 560 (754)
-+..|.|+|..+.++... .....+-||.+.|-.+... .....|..+. ..+|.|||.+.| .|...++. ...|.|+|
T Consensus 353 ~~~~f~v~i~~~~~~n~~-~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f-~i~i~dLPr~arL~~tl 429 (1091)
T 3hhm_A 353 INSALRIKILCATYVNVN-IRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNY-DIYIPDLPRAARLCLSI 429 (1091)
T ss_dssp CCSEEEEEEEEESCCCCC-CSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEE-EEEGGGCCTTCEEEEEE
T ss_pred CCCCEEEEEEEecCCCCC-ccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEe-cCccccCChhcEEEEEE
Confidence 457899999999988643 2345678999998654332 2344455443 467889999999 47776664 48899999
Q ss_pred eeCCCC----CC-ccceeeeecCcccC
Q psy7848 561 LDDDKY----GH-DFLGEARFPLNRLR 582 (754)
Q Consensus 561 ~D~d~~----g~-dfLGev~I~L~~L~ 582 (754)
|+.... .. ..||-+.++|-+..
T Consensus 430 ~~~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 430 CSVKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCCCC-------CCEEEEEESBCTT
T ss_pred EEecCccCcccccceeEEeeeeeEccC
Confidence 987653 12 57999999887643
No 122
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=85.42 E-value=0.63 Score=57.20 Aligned_cols=93 Identities=13% Similarity=0.106 Sum_probs=65.3
Q ss_pred ccceeeccccccccccCCCCCCCCceEEEEecCCCCcc--eeeeeeecCCCCCccceeEEEEeecCccCC-CeEEEEEEE
Q psy7848 627 KRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKR--KYKTGVKWKTLNPIFNEEFAIETKITELSK-QTLVITVWD 703 (754)
Q Consensus 627 ~g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~--k~KT~v~kkTlNP~wNEtF~F~V~~~dL~~-~~L~ItV~D 703 (754)
...+.|.|..+.++... ..++-||.+.+..++... ...|..+.-..+|.|||.+.|++...+|.. ..|.|+||+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 46889999999998653 457899998876553221 344655555678999999999998888864 679999998
Q ss_pred cc----CC------------------CCCceeEEEEEecCC
Q psy7848 704 KD----YG------------------KSNDYLGCLELCCNS 722 (754)
Q Consensus 704 ~d----~~------------------~~ddfLG~v~L~l~s 722 (754)
.. .. +.+..||.+.+.+-.
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd 469 (1092)
T 2y3a_A 429 VLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFD 469 (1092)
T ss_dssp C------------------------------CCEEEEESBC
T ss_pred ecCccccccccccccccccccccccccccceeEEEeeeeEC
Confidence 63 10 113489999998654
No 123
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=83.36 E-value=0.87 Score=42.14 Aligned_cols=44 Identities=25% Similarity=0.573 Sum_probs=31.4
Q ss_pred ccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
+-.|.+|...|. ..+-..|+|..|..|-.... ...-.|.+|.+.
T Consensus 53 ~~~C~iC~~~~~------------~~~~~~CgH~fc~~Ci~~~~-----~~~~~CP~Cr~~ 96 (138)
T 4ayc_A 53 ELQCIICSEYFI------------EAVTLNCAHSFCSYCINEWM-----KRKIECPICRKD 96 (138)
T ss_dssp HSBCTTTCSBCS------------SEEEETTSCEEEHHHHHHHT-----TTCSBCTTTCCB
T ss_pred cCCCcccCcccC------------CceECCCCCCccHHHHHHHH-----HcCCcCCCCCCc
Confidence 367999998887 22334699999999976543 223459999754
No 124
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=83.35 E-value=3.3 Score=50.27 Aligned_cols=95 Identities=13% Similarity=0.097 Sum_probs=65.1
Q ss_pred cCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCC-CceEEEeeeecCCCCCeeceeEEEeeeeccccC-cceEEEEE
Q psy7848 483 TTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTK-TSHRLRTKTCLRTINPEFHEKLTFYSVSETDLS-LQSLHILV 560 (754)
Q Consensus 483 ~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~-~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el~-~~~L~~sV 560 (754)
-+..|.|+|..+.++... ...+-||.+.+-.++. -.....|..+.-..+|.|||.+.|. |...++. ...|.|+|
T Consensus 215 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~-i~i~dLPr~a~L~~ti 290 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFD-ISVCDLPRMARLCFAL 290 (940)
T ss_dssp CCSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEE-EEGGGCCTTCEEEEEE
T ss_pred cCCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcc-cccccCCcccEEEEEE
Confidence 457899999999998754 3467888888753321 1234456555557789999999994 7776664 48899999
Q ss_pred eeCCCC--C----------C-ccceeeeecCccc
Q psy7848 561 LDDDKY--G----------H-DFLGEARFPLNRL 581 (754)
Q Consensus 561 ~D~d~~--g----------~-dfLGev~I~L~~L 581 (754)
|+.... + . ..||.+.++|-+-
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 291 YAVVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EEEC----------------CEEEEEEEEESBCT
T ss_pred EEecCCccCccccccccccccceEEEEeeeEECC
Confidence 996332 1 2 5788888887754
No 125
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=81.56 E-value=0.68 Score=34.91 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=23.9
Q ss_pred cccccccccCCCccccccccCCCCccccccccccccc
Q psy7848 136 HACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQK 172 (754)
Q Consensus 136 ~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~ 172 (754)
..|++||++|.. +. +-.-++..|..|..+|=.+
T Consensus 4 Y~C~rCg~~fs~--~e--l~~lP~IrCpyCGyrii~K 36 (48)
T 4ayb_P 4 YRCGKCWKTFTD--EQ--LKVLPGVRCPYCGYKIIFM 36 (48)
T ss_dssp -CCCCTTTTCCC--CC--SCCCSSSCCTTTCCSCEEC
T ss_pred EEeeccCCCccH--HH--HhhCCCcccCccCcEEEEE
Confidence 679999999992 33 2234699999999887444
No 126
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=80.07 E-value=0.59 Score=39.24 Aligned_cols=50 Identities=20% Similarity=0.526 Sum_probs=35.8
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
.+..|.+|.+++. .-...-..| .|+|.+|..|-.... ......|.+|.+.
T Consensus 10 ~~~~CpICle~~~-------~~d~~~~p~-~CGH~fC~~Cl~~~~----~~~~~~CP~CR~~ 59 (78)
T 1e4u_A 10 DPVECPLCMEPLE-------IDDINFFPC-TCGYQICRFCWHRIR----TDENGLCPACRKP 59 (78)
T ss_dssp CCCBCTTTCCBCC-------TTTTTCCSS-TTSCCCCHHHHHHHT----TSSCSBCTTTCCB
T ss_pred cCCcCCccCccCc-------ccccccccc-CCCCCcCHHHHHHHH----hcCCCCCCCCCCc
Confidence 4579999999886 222222334 799999999987764 1346789999865
No 127
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=79.70 E-value=15 Score=44.69 Aligned_cols=97 Identities=15% Similarity=0.024 Sum_probs=61.5
Q ss_pred cCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeeccccC-cceEEEEEe
Q psy7848 483 TTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSETDLS-LQSLHILVL 561 (754)
Q Consensus 483 ~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el~-~~~L~~sV~ 561 (754)
-+..+.|.|+.+..+... .+...+-||.+.+-.+...-...+|..+.-+.+|.|||.+.| .|...++. ...|.|+||
T Consensus 216 ~~~~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f-~i~i~dLPr~a~L~~ti~ 293 (961)
T 1e7u_A 216 CDRKFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEF-SIKIKDLPKGALLNLQIY 293 (961)
T ss_dssp CCSEEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEE-EEEGGGCCTTCEEEEEEE
T ss_pred ccCceEEEEeeccccccc-CCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEe-ccccccCCcccEEEEEEE
Confidence 446788999988652211 123457788887754332222344555555667999999999 47776664 488999999
Q ss_pred eCCCCC----------------C-ccceeeeecCccc
Q psy7848 562 DDDKYG----------------H-DFLGEARFPLNRL 581 (754)
Q Consensus 562 D~d~~g----------------~-dfLGev~I~L~~L 581 (754)
+....+ . ..||-+.++|-+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 294 CGAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp EEEC--------------------CEEEEEEEESBCT
T ss_pred ecccCccccccccccccccccccceeEEEEeeeeecC
Confidence 853221 2 4677777777653
No 128
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=76.90 E-value=1.9 Score=49.53 Aligned_cols=38 Identities=18% Similarity=0.335 Sum_probs=32.3
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccc
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESV 178 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~ 178 (754)
....|.+|+..|. -+...|..|..|+..||++|....+
T Consensus 528 ~~t~C~~C~~~l~-------gl~~qg~~C~~C~~~vHk~C~~~v~ 565 (587)
T 3ky9_A 528 ETTSCKACQMLLR-------GTFYQGYRCHRCRASAHKECLGRVP 565 (587)
T ss_dssp SCCBCTTTCSBCC-------SSSCCEEEETTTCCEECSGGGGGSC
T ss_pred CCccccccccccc-------ccccCCcCCCCCCCccchhhhhcCC
Confidence 4589999999983 2567799999999999999998763
No 129
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=71.97 E-value=1.1 Score=37.53 Aligned_cols=52 Identities=19% Similarity=0.491 Sum_probs=36.4
Q ss_pred HHHHHHHHhhhhccCCCccccccccccccCCCccccccccCCCCccccccccc-cccccccccccCCCCCCceeeccchh
Q psy7848 116 RLVERVDNMKRNVTGGAAAAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGG-VCQKCGIESVSASKKENIWLCKICAE 194 (754)
Q Consensus 116 ~L~~~l~~~k~~~~~~~~~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~-vC~~C~~~~~~~~~~~~~WlC~vC~~ 194 (754)
.|.+++++++.. ..|.+|...+. ..+-..|+|. +|..|.... |.|.+|..
T Consensus 7 ~l~~~~~~l~~~--------~~C~IC~~~~~------------~~v~~pCgH~~~C~~C~~~~---------~~CP~Cr~ 57 (79)
T 2yho_A 7 VLQEKLRKLKEA--------MLCMVCCEEEI------------NSTFCPCGHTVCCESCAAQL---------QSCPVCRS 57 (79)
T ss_dssp THHHHHHHHHHH--------TBCTTTSSSBC------------CEEEETTCBCCBCHHHHTTC---------SBCTTTCC
T ss_pred HHHHHHHcCCCC--------CEeEEeCcccC------------cEEEECCCCHHHHHHHHHhc---------CcCCCCCc
Confidence 355555555543 68999988777 4455678888 888887533 58999986
Q ss_pred hh
Q psy7848 195 TR 196 (754)
Q Consensus 195 ~r 196 (754)
.-
T Consensus 58 ~i 59 (79)
T 2yho_A 58 RV 59 (79)
T ss_dssp BC
T ss_pred hh
Confidence 53
No 130
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=71.56 E-value=1.8 Score=39.05 Aligned_cols=46 Identities=20% Similarity=0.521 Sum_probs=33.1
Q ss_pred ccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETR 196 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~r 196 (754)
+-.|.+|...|. .-+-..|+|..|..|-...- ......|.+|...-
T Consensus 52 ~~~C~IC~~~~~------------~p~~~~CgH~fC~~Ci~~~~----~~~~~~CP~Cr~~~ 97 (124)
T 3fl2_A 52 TFQCICCQELVF------------RPITTVCQHNVCKDCLDRSF----RAQVFSCPACRYDL 97 (124)
T ss_dssp HTBCTTTSSBCS------------SEEECTTSCEEEHHHHHHHH----HTTCCBCTTTCCBC
T ss_pred CCCCCcCChHHc------------CcEEeeCCCcccHHHHHHHH----hHCcCCCCCCCccC
Confidence 378999999887 22334899999999976553 13456899998643
No 131
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=68.98 E-value=2.4 Score=34.18 Aligned_cols=28 Identities=25% Similarity=0.634 Sum_probs=22.4
Q ss_pred ccccccccccCCCccccccccCCCCcccccccccc
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGV 169 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~v 169 (754)
...|+.|+..+. +-......|..|.++|
T Consensus 21 ~Y~C~~Cg~~~~-------l~~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 21 IYLCADCGARNT-------IQAKEVIRCRECGHRV 48 (63)
T ss_dssp CCBCSSSCCBCC-------CCSSSCCCCSSSCCCC
T ss_pred EEECCCCCCeee-------cCCCCceECCCCCcEE
Confidence 488999999998 5556678888888765
No 132
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=68.88 E-value=1.6 Score=37.48 Aligned_cols=50 Identities=24% Similarity=0.612 Sum_probs=38.3
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccc
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKIC 192 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC 192 (754)
+...|.+|+...|+ ..-+..-+-|..|...||+.|-.|-. ++..-.|--|
T Consensus 15 ~~qiCqiCGD~VG~-----~~~Ge~FVAC~eC~FPvCrpCyEYEr----keG~q~CpqC 64 (93)
T 1weo_A 15 DGQFCEICGDQIGL-----TVEGDLFVACNECGFPACRPCYEYER----REGTQNCPQC 64 (93)
T ss_dssp SSCBCSSSCCBCCB-----CSSSSBCCSCSSSCCCCCHHHHHHHH----HTSCSSCTTT
T ss_pred CCCccccccCcccc-----CCCCCEEEeeeccCChhhHHHHHHHH----hccCcccccc
Confidence 34799999999991 12233468899999999999999886 4666667666
No 133
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=68.74 E-value=2.6 Score=36.97 Aligned_cols=46 Identities=20% Similarity=0.523 Sum_probs=32.5
Q ss_pred cccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 136 HACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 136 ~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
-.|.+|...+. ..+-..|+|.+|..|-..... .......|.+|...
T Consensus 22 ~~C~IC~~~~~------------~p~~~~CgH~fC~~Ci~~~~~--~~~~~~~CP~Cr~~ 67 (112)
T 1jm7_A 22 LECPICLELIK------------EPVSTKCDHIFCKFCMLKLLN--QKKGPSQCPLCKND 67 (112)
T ss_dssp TSCSSSCCCCS------------SCCBCTTSCCCCSHHHHHHHH--SSSSSCCCTTTSCC
T ss_pred CCCcccChhhc------------CeEECCCCCHHHHHHHHHHHH--hCCCCCCCcCCCCc
Confidence 68999998776 222247999999999876641 12334789999754
No 134
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=68.44 E-value=14 Score=35.05 Aligned_cols=98 Identities=9% Similarity=0.157 Sum_probs=66.1
Q ss_pred cCCEEEEEEEEecCCCCCC--CCCCCCcEEEEEEeCCCCCceEEEeeeecCCCCCeeceeEEEeeeecccc-----Ccce
Q psy7848 483 TTCSLHVTLHRAKGLRAMD--IHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSVSETDL-----SLQS 555 (754)
Q Consensus 483 ~~~~L~VtIi~ArnL~~~d--~~g~sDPYVkv~Llp~~~~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el-----~~~~ 555 (754)
..+.|.|+|.++. |.+.- ..+..+|+.-+.+.-- .-..+-|.++. ..+|.||.+-.| .|..+++ ....
T Consensus 16 gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~--dfEtq~Tpv~~-G~~p~y~fts~Y-~V~~d~~fl~yL~~~~ 90 (156)
T 2yrb_A 16 GENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFY--DFELQTTPVVR-GLHPEYNFTSQY-LVHVNDLFLQYIQKNT 90 (156)
T ss_dssp SCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECST--TCCCEECCCEE-SSSCCCCEEEEE-EECCSHHHHHHHHHCC
T ss_pred CCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEe--ceEeeeccccc-CCCCCcceEEEE-EEEeCHHHHHHHhcCC
Confidence 3567778888875 32211 1234577766666431 12456676666 799999999987 4555543 3468
Q ss_pred EEEEEeeCCCCCC-ccceeeeecCcccCCCCc
Q psy7848 556 LHILVLDDDKYGH-DFLGEARFPLNRLRPHIS 586 (754)
Q Consensus 556 L~~sV~D~d~~g~-dfLGev~I~L~~L~~~~~ 586 (754)
|.|+|+.... .+ ..||.+.|+|.++...+.
T Consensus 91 l~lELhqa~g-~~~~tla~~~I~l~~lLe~~~ 121 (156)
T 2yrb_A 91 ITLEVHQAYS-TEYETIAACQLKFHEILEKSG 121 (156)
T ss_dssp EEEEEEEECS-SCEEEEEEEEECCSHHHHCCS
T ss_pred EEEEEEEeeC-CCceEEEEEEEEhHHhhCcCC
Confidence 9999988753 35 899999999999876544
No 135
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=67.14 E-value=2.1 Score=40.29 Aligned_cols=45 Identities=24% Similarity=0.610 Sum_probs=32.6
Q ss_pred ccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
.-.|.+|...|. ..+-..|.|.+|..|-.... ......|.+|...
T Consensus 78 ~~~C~IC~~~~~------------~pv~~~CgH~fC~~Ci~~~~----~~~~~~CP~Cr~~ 122 (150)
T 1z6u_A 78 SFMCVCCQELVY------------QPVTTECFHNVCKDCLQRSF----KAQVFSCPACRHD 122 (150)
T ss_dssp HTBCTTTSSBCS------------SEEECTTSCEEEHHHHHHHH----HTTCCBCTTTCCB
T ss_pred CCEeecCChhhc------------CCEEcCCCCchhHHHHHHHH----HhCCCcCCCCCcc
Confidence 378999998877 22235899999999987664 1334579999754
No 136
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=66.79 E-value=5.2 Score=49.27 Aligned_cols=78 Identities=17% Similarity=0.176 Sum_probs=54.8
Q ss_pred cCCEEEEEEEEecCCCCCCCCCCCCcEEEEEEeCCCC-CceEEEeeeecCCCCCeeceeEEEeeeeccccC-cceEEEEE
Q psy7848 483 TTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTK-TSHRLRTKTCLRTINPEFHEKLTFYSVSETDLS-LQSLHILV 560 (754)
Q Consensus 483 ~~~~L~VtIi~ArnL~~~d~~g~sDPYVkv~Llp~~~-~~~~~rTkvi~~TlNP~WnE~f~F~~I~~~el~-~~~L~~sV 560 (754)
-+..|.|+|..+.++... ...+-||.+.+-.+.. -.....|..+.-..+|.|||.+.|. |...++. ...|.|+|
T Consensus 351 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~-i~~~dLPr~a~L~~ti 426 (1092)
T 2y3a_A 351 NNNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFD-INICDLPRMARLCFAV 426 (1092)
T ss_dssp CCSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEE-EESSSCCTTCEEEEEC
T ss_pred cCCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeC-CccccCChhcEEEEEE
Confidence 457899999999998754 3467888877643221 1123345555546789999999994 7776664 48899999
Q ss_pred eeCC
Q psy7848 561 LDDD 564 (754)
Q Consensus 561 ~D~d 564 (754)
|+..
T Consensus 427 ~~~~ 430 (1092)
T 2y3a_A 427 YAVL 430 (1092)
T ss_dssp CCC-
T ss_pred EEec
Confidence 9963
No 137
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=61.80 E-value=2.9 Score=31.56 Aligned_cols=48 Identities=21% Similarity=0.398 Sum_probs=33.6
Q ss_pred ccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
+..|.+|.+.|. .+........|+|..|..|-.... .....|.+|...
T Consensus 5 ~~~C~IC~~~~~--------~~~~~~~~~~C~H~f~~~Ci~~w~-----~~~~~CP~Cr~~ 52 (55)
T 1iym_A 5 GVECAVCLAELE--------DGEEARFLPRCGHGFHAECVDMWL-----GSHSTCPLCRLT 52 (55)
T ss_dssp SCCCTTTCCCCC--------TTSCCEECSSSCCEECTTHHHHTT-----TTCCSCSSSCCC
T ss_pred CCcCccCCcccc--------CCCceEECCCCCCcccHHHHHHHH-----HcCCcCcCCCCE
Confidence 478999999987 223334444699999999987653 223569888753
No 138
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=61.58 E-value=1.5 Score=37.15 Aligned_cols=39 Identities=28% Similarity=0.693 Sum_probs=25.7
Q ss_pred cccccccccCCCccccccccCCCCcccccccccc--ccccccccccCCCCCCceeeccchh
Q psy7848 136 HACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGV--CQKCGIESVSASKKENIWLCKICAE 194 (754)
Q Consensus 136 ~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~v--C~~C~~~~~~~~~~~~~WlC~vC~~ 194 (754)
.+|..|++.|-. ...|.+|...+ |+.||.. .+.|+-|.+
T Consensus 19 ~~C~~C~~~~~~-----------~afCPeCgq~Le~lkACGA~---------~yFC~~C~~ 59 (81)
T 2jrp_A 19 AHCETCAKDFSL-----------QALCPDCRQPLQVLKACGAV---------DYFCQNGHG 59 (81)
T ss_dssp EECTTTCCEEEE-----------EEECSSSCSCCCEEEETTEE---------EECCTTTTC
T ss_pred eECccccccCCC-----------cccCcchhhHHHHHHhcCCc---------CeeeccCCC
Confidence 457777776662 33788887766 8888764 356666654
No 139
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=61.34 E-value=2.9 Score=34.47 Aligned_cols=28 Identities=32% Similarity=0.680 Sum_probs=20.0
Q ss_pred ccccccccccCCCccccccccCCCCcccccccccc
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGV 169 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~v 169 (754)
+..|..|+..|- +.......|..|.++|
T Consensus 28 ~Y~C~~CG~~~e-------~~~~d~irCp~CG~RI 55 (70)
T 1twf_L 28 KYICAECSSKLS-------LSRTDAVRCKDCGHRI 55 (70)
T ss_dssp CEECSSSCCEEC-------CCTTSTTCCSSSCCCC
T ss_pred EEECCCCCCcce-------eCCCCCccCCCCCceE
Confidence 478999999988 4555566777776543
No 140
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=60.92 E-value=1.9 Score=32.57 Aligned_cols=48 Identities=15% Similarity=0.406 Sum_probs=34.5
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAE 194 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~ 194 (754)
++..|.+|.+.|. -.....+...|.|.+|..|-.... .....|.+|..
T Consensus 4 ~~~~C~IC~~~~~--------~~~~~~~~~~CgH~fc~~Ci~~~~-----~~~~~CP~Cr~ 51 (55)
T 2ecm_A 4 GSSGCPICLEDIH--------TSRVVAHVLPCGHLLHRTCYEEML-----KEGYRCPLCSG 51 (55)
T ss_dssp CCCSCTTTCCCCC--------TTTSCEEECTTSCEEETTHHHHHH-----HHTCCCTTSCC
T ss_pred CCCcCcccChhhc--------CCCcCeEecCCCCcccHHHHHHHH-----HcCCcCCCCCC
Confidence 3578999999986 222345667799999999987664 12267888864
No 141
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=59.03 E-value=2.3 Score=37.78 Aligned_cols=70 Identities=20% Similarity=0.319 Sum_probs=43.0
Q ss_pred CHHHHHHHHHHHHhhHHHhHHHHHHH--------HH-HHHHHHHhhhhccCCCc----cccccccccccCCCcccccccc
Q psy7848 89 DPTEQEKIEEVIKRAEALDYIEQERV--------GR-LVERVDNMKRNVTGGAA----AAHACALCGDKFSPIFDRLGLF 155 (754)
Q Consensus 89 t~~E~e~I~~Vl~R~~~l~~~E~~Ri--------~~-L~~~l~~~k~~~~~~~~----~~~~C~~C~~~~g~~~~~~~~~ 155 (754)
+..-||.|..+|+ ++.+...|-..+ +. .-+.|+.+.+.+...+. -...|.-||-.|. --
T Consensus 9 ~~T~Re~Ii~lL~-~~plta~ei~~~l~i~~~~~ke~Vy~hLeHIaksl~r~g~~L~v~p~~C~~CG~~F~-------~~ 80 (105)
T 2gmg_A 9 SATRREKIIELLL-EGDYSPSELARILDMRGKGSKKVILEDLKVISKIAKREGMVLLIKPAQCRKCGFVFK-------AE 80 (105)
T ss_dssp HHHHHHHHHHHTT-TSCBCTTHHHHSSCCCSSCCHHHHHHHHHHHHHHHTTTTEEEEECCCBBTTTCCBCC-------CC
T ss_pred cccHHHHHHHHHH-cCCCCHHHHHHHhCCCCCChHHHHHHHHHHHHHHHhcCCcEEEEECcChhhCcCeec-------cc
Confidence 4556777777775 455544443332 22 44567777776654442 5689999999983 23
Q ss_pred CCCCccccccc
Q psy7848 156 GAKCLVCHDCR 166 (754)
Q Consensus 156 ~~~~~~C~~C~ 166 (754)
.+....|..|+
T Consensus 81 ~~kPsrCP~Ck 91 (105)
T 2gmg_A 81 INIPSRCPKCK 91 (105)
T ss_dssp SSCCSSCSSSC
T ss_pred CCCCCCCcCCC
Confidence 44456677776
No 142
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=58.06 E-value=6.2 Score=40.08 Aligned_cols=46 Identities=4% Similarity=-0.216 Sum_probs=32.5
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
..-.|.+|+..|. --++..|+|..|+.|-...-. .....|.+|...
T Consensus 207 ~~~~c~i~~~~~~------------dPv~~~~gh~f~~~~i~~~~~----~~~~~cP~~~~~ 252 (281)
T 2c2l_A 207 DYLCGKISFELMR------------EPCITPSGITYDRKDIEEHLQ----RVGHFNPVTRSP 252 (281)
T ss_dssp STTBCTTTCSBCS------------SEEECSSCCEEETTHHHHHHH----HTCSSCTTTCCC
T ss_pred cccCCcCcCCHhc------------CCeECCCCCEECHHHHHHHHH----HCCCCCcCCCCC
Confidence 5689999999998 455566999999999665531 111228888743
No 143
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=57.63 E-value=3 Score=36.94 Aligned_cols=48 Identities=19% Similarity=0.496 Sum_probs=35.4
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETRE 197 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~re 197 (754)
.+-.|.+|...|. .-+-..|+|..|..|-.... ......|.+|...-.
T Consensus 14 ~~~~C~iC~~~~~------------~p~~~~CgH~fC~~Ci~~~~----~~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 14 SECQCGICMEILV------------EPVTLPCNHTLCKPCFQSTV----EKASLCCPFCRRRVS 61 (115)
T ss_dssp HHHBCTTTCSBCS------------SCEECTTSCEECHHHHCCCC----CTTTSBCTTTCCBCH
T ss_pred CCCCCccCCcccC------------ceeEcCCCCHHhHHHHHHHH----hHCcCCCCCCCcccC
Confidence 3478999998877 23334799999999987664 233578999987644
No 144
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=56.25 E-value=4.6 Score=32.99 Aligned_cols=39 Identities=23% Similarity=0.597 Sum_probs=28.5
Q ss_pred cccccccccCCCccccccccCCCCccccccccc-cccccccccccCCCCCCceeeccchhh
Q psy7848 136 HACALCGDKFSPIFDRLGLFGAKCLVCHDCRGG-VCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 136 ~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~-vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
..|.+|...+. ..+-..|+|. .|..|.... ..|.+|...
T Consensus 25 ~~C~iC~~~~~------------~~~~~pCgH~~~C~~C~~~~---------~~CP~Cr~~ 64 (74)
T 4ic3_A 25 KLCKICMDRNI------------AIVFVPCGHLVTCKQCAEAV---------DKCPMCYTV 64 (74)
T ss_dssp TBCTTTSSSBC------------CEEEETTCCBCCCHHHHTTC---------SBCTTTCCB
T ss_pred CCCCCCCCCCC------------CEEEcCCCChhHHHHhhhcC---------ccCCCcCcC
Confidence 68999998877 3445578888 888885422 678888754
No 145
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=55.46 E-value=5.7 Score=42.66 Aligned_cols=41 Identities=32% Similarity=0.638 Sum_probs=32.2
Q ss_pred cccccccccccCCCccccccccCCCCccccccccc-cccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGG-VCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~-vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
.+..|.+|...+. ..+-..|+|. +|..|.... ..|.+|...
T Consensus 294 ~~~~C~IC~~~~~------------~~v~lpCgH~~fC~~C~~~~---------~~CP~CR~~ 335 (345)
T 3t6p_A 294 EERTCKVCMDKEV------------SVVFIPCGHLVVCQECAPSL---------RKCPICRGI 335 (345)
T ss_dssp TTCBCTTTSSSBC------------CEEEETTCCEEECTTTGGGC---------SBCTTTCCB
T ss_pred CCCCCCccCCcCC------------ceEEcCCCChhHhHHHHhcC---------CcCCCCCCC
Confidence 3478999999887 5566689999 999997633 679999764
No 146
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=52.46 E-value=2.1 Score=34.16 Aligned_cols=45 Identities=16% Similarity=0.344 Sum_probs=33.4
Q ss_pred cccccccccccCCCccccccccCCCCcccc--ccccc-cccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCH--DCRGG-VCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~--~C~~~-vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
.+..|.+|...+. ..+-. .|+|. +|..|..... ...+.|-+|...
T Consensus 7 ~~~~C~IC~~~~~------------~~~~~~~pCgH~~~C~~C~~~~~-----~~~~~CPiCR~~ 54 (64)
T 2vje_A 7 AIEPCVICQGRPK------------NGCIVHGKTGHLMACFTCAKKLK-----KRNKPCPVCRQP 54 (64)
T ss_dssp GGSCCTTTSSSCS------------CEEEEETTEEEEEECHHHHHHHH-----HTTCCCTTTCCC
T ss_pred CcCCCCcCCCCCC------------CEEEECCCCCChhhHHHHHHHHH-----HcCCcCCCcCcc
Confidence 3578999998877 23333 69999 7999988774 345789999864
No 147
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=52.44 E-value=4.3 Score=31.32 Aligned_cols=28 Identities=21% Similarity=0.519 Sum_probs=22.2
Q ss_pred cccccccccccccccCCCCCCceeeccchhhhhh
Q psy7848 165 CRGGVCQKCGIESVSASKKENIWLCKICAETREM 198 (754)
Q Consensus 165 C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~rel 198 (754)
+.++||.+|+...+ ..+|.|.-|... .|
T Consensus 12 ~~k~iCpkC~a~~~-----~gaw~CrKCG~~-~l 39 (51)
T 3j21_g 12 FKKYVCLRCGATNP-----WGAKKCRKCGYK-RL 39 (51)
T ss_dssp SSEEECTTTCCEEC-----TTCSSCSSSSSC-CC
T ss_pred hCCccCCCCCCcCC-----CCceecCCCCCc-cc
Confidence 46789999998864 789999999765 44
No 148
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=50.90 E-value=2.5 Score=40.06 Aligned_cols=46 Identities=20% Similarity=0.566 Sum_probs=34.6
Q ss_pred ccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
+-.|.+|...|.- .+.+..|.|.+|..|-.... ......|.+|...
T Consensus 54 ~~~C~IC~~~~~~-----------p~~~~~CgH~fC~~Ci~~~~----~~~~~~CP~Cr~~ 99 (165)
T 2ckl_B 54 ELMCPICLDMLKN-----------TMTTKECLHRFCADCIITAL----RSGNKECPTCRKK 99 (165)
T ss_dssp HHBCTTTSSBCSS-----------EEEETTTCCEEEHHHHHHHH----HTTCCBCTTTCCB
T ss_pred CCCCcccChHhhC-----------cCEeCCCCChhHHHHHHHHH----HhCcCCCCCCCCc
Confidence 3689999888871 34556999999999987764 1235679999854
No 149
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.97 E-value=4 Score=32.81 Aligned_cols=45 Identities=20% Similarity=0.383 Sum_probs=32.7
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
.+..|.+|...+. ..+-..|.|..|..|-.... .....|.+|...
T Consensus 14 ~~~~C~IC~~~~~------------~~~~~~CgH~fC~~Ci~~~~-----~~~~~CP~Cr~~ 58 (71)
T 2d8t_A 14 TVPECAICLQTCV------------HPVSLPCKHVFCYLCVKGAS-----WLGKRCALCRQE 58 (71)
T ss_dssp SCCBCSSSSSBCS------------SEEEETTTEEEEHHHHHHCT-----TCSSBCSSSCCB
T ss_pred CCCCCccCCcccC------------CCEEccCCCHHHHHHHHHHH-----HCCCcCcCcCch
Confidence 4578999998887 22333699999999987653 223689999764
No 150
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.83 E-value=4.6 Score=32.36 Aligned_cols=48 Identities=23% Similarity=0.530 Sum_probs=34.3
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
.+..|.+|...|. ..+-..|.|.+|..|-.... ........|.+|...
T Consensus 19 ~~~~C~IC~~~~~------------~~~~~~CgH~fC~~Ci~~~~--~~~~~~~~CP~Cr~~ 66 (73)
T 2ysl_A 19 EEVICPICLDILQ------------KPVTIDCGHNFCLKCITQIG--ETSCGFFKCPLCKTS 66 (73)
T ss_dssp CCCBCTTTCSBCS------------SEEECTTCCEEEHHHHHHHC--SSSCSCCCCSSSCCC
T ss_pred cCCEeccCCcccC------------CeEEcCCCChhhHHHHHHHH--HcCCCCCCCCCCCCc
Confidence 4579999999887 22223899999999988764 111345689999764
No 151
>1tjl_A DNAK suppressor protein; DKSA, transcription factor, RNA polymerase, stringent response, PPGPP, riken structural genomics/proteomics initiative; 2.00A {Escherichia coli} SCOP: a.2.14.1 g.39.1.13 PDB: 3h3p_S
Probab=49.00 E-value=22 Score=33.46 Aligned_cols=53 Identities=15% Similarity=0.310 Sum_probs=30.9
Q ss_pred HhHHHHHHHHHHHHHHHHhhhhccCCCccccccccccccCCCccccccccCCCCcccccccc
Q psy7848 106 LDYIEQERVGRLVERVDNMKRNVTGGAAAAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRG 167 (754)
Q Consensus 106 l~~~E~~Ri~~L~~~l~~~k~~~~~~~~~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~ 167 (754)
++..++++|.++..-|..|. .+.+ ..|..||++.+ +.| ..+......|.+|+.
T Consensus 88 ~~~re~~~L~~i~~Al~ri~----~g~y--g~C~~Cg~~Ip--~~R-l~a~P~a~~Ci~Cq~ 140 (151)
T 1tjl_A 88 NRDRERKLIKKIEKTLKKVE----DEDF--GYCESCGVEIG--IRR-LEARPTADLCIDCKT 140 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----TTCC--SBCSSSSCBCC--HHH-HHHCTTCCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh----CCCC--ceeCCCCCcch--HHH-HhcCCCcchhHHHHH
Confidence 34455555666665555553 2334 68999999988 333 123334667777763
No 152
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.73 E-value=9.3 Score=29.60 Aligned_cols=50 Identities=18% Similarity=0.566 Sum_probs=34.6
Q ss_pred ccccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 133 AAAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 133 ~~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
.++..|..|+..-. -..|..|....=..|-.... ...+...|.|..|.++
T Consensus 7 ~~~~~C~vC~~~g~------------ll~Cd~C~~~~H~~Cl~ppl-~~~p~g~W~C~~C~~q 56 (56)
T 2yql_A 7 GHEDFCSVCRKSGQ------------LLMCDTCSRVYHLDCLDPPL-KTIPKGMWICPRCQDQ 56 (56)
T ss_dssp SSCCSCSSSCCSSC------------CEECSSSSCEECSSSSSSCC-CSCCCSSCCCHHHHCC
T ss_pred CCCCCCccCCCCCe------------EEEcCCCCcceECccCCCCc-CCCCCCceEChhhhCc
Confidence 35688999997522 45688888777777776432 2335678999999753
No 153
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=47.80 E-value=8.2 Score=31.72 Aligned_cols=54 Identities=30% Similarity=0.562 Sum_probs=38.1
Q ss_pred ccccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhh
Q psy7848 133 AAAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETR 196 (754)
Q Consensus 133 ~~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~r 196 (754)
.+...|.+|++.-. -..+.-..|-.|..-+=..|-... ..+++.|+|..|...+
T Consensus 14 ~~~~~C~vC~~~~s-------~~~~~ll~CD~C~~~~H~~Cl~~~---~vP~g~W~C~~C~~~~ 67 (71)
T 2ku3_A 14 DEDAVCSICMDGES-------QNSNVILFCDMCNLAVHQECYGVP---YIPEGQWLCRHCLQSR 67 (71)
T ss_dssp CSSCSCSSSCCCCC-------CSSSCEEECSSSCCEEEHHHHTCS---SCCSSCCCCHHHHHHH
T ss_pred CCCCCCCCCCCCCC-------CCCCCEEECCCCCCccccccCCCC---cCCCCCcCCccCcCcC
Confidence 35688999988753 234456778888877777776533 1357789999998754
No 154
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=47.55 E-value=6.4 Score=32.04 Aligned_cols=48 Identities=15% Similarity=0.396 Sum_probs=32.8
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
....|.+|...|.. - . ...-..|.|.+|..|-.... .....|-+|...
T Consensus 14 ~~~~C~IC~~~~~~-------~-~-~~~~~~C~H~fc~~Ci~~~~-----~~~~~CP~Cr~~ 61 (78)
T 2ect_A 14 SGLECPVCKEDYAL-------G-E-SVRQLPCNHLFHDSCIVPWL-----EQHDSCPVCRKS 61 (78)
T ss_dssp SSCCCTTTTSCCCT-------T-S-CEEECTTSCEEETTTTHHHH-----TTTCSCTTTCCC
T ss_pred CCCCCeeCCccccC-------C-C-CEEEeCCCCeecHHHHHHHH-----HcCCcCcCcCCc
Confidence 45899999999871 1 1 11223599999999987664 223579999753
No 155
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=46.48 E-value=3 Score=33.11 Aligned_cols=46 Identities=17% Similarity=0.264 Sum_probs=32.7
Q ss_pred cccccccccccCCCccccccccCCCCccc--cccccc-cccccccccccCCCCCCceeeccchhhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVC--HDCRGG-VCQKCGIESVSASKKENIWLCKICAETR 196 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C--~~C~~~-vC~~C~~~~~~~~~~~~~WlC~vC~~~r 196 (754)
....|.+|...+. ...- ..|+|. +|..|..... ...+.|.+|...-
T Consensus 6 ~~~~C~IC~~~~~------------~~~~~~~pCgH~~~C~~C~~~~~-----~~~~~CPiCR~~i 54 (63)
T 2vje_B 6 LLKPCSLCEKRPR------------DGNIIHGRTGHLVTCFHCARRLK-----KAGASCPICKKEI 54 (63)
T ss_dssp GGSBCTTTSSSBS------------CEEEEETTEEEEEECHHHHHHHH-----HTTCBCTTTCCBC
T ss_pred cCCCCcccCCcCC------------CeEEEecCCCCHhHHHHHHHHHH-----HhCCcCCCcCchh
Confidence 3578999998765 2222 278888 7999988774 2347999998643
No 156
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=45.71 E-value=2.8 Score=36.39 Aligned_cols=46 Identities=22% Similarity=0.517 Sum_probs=35.1
Q ss_pred cccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhh
Q psy7848 136 HACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETR 196 (754)
Q Consensus 136 ~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~r 196 (754)
-.|.+|...|.. .+.|..|+|..|..|-...-. .....|.+|...-
T Consensus 23 ~~C~IC~~~~~~-----------p~~~~~CgH~FC~~Ci~~~~~----~~~~~CP~Cr~~~ 68 (100)
T 3lrq_A 23 FRCFICMEKLRD-----------ARLCPHCSKLCCFSCIRRWLT----EQRAQCPHCRAPL 68 (100)
T ss_dssp TBCTTTCSBCSS-----------EEECTTTCCEEEHHHHHHHHH----HTCSBCTTTCCBC
T ss_pred CCCccCCccccC-----------ccccCCCCChhhHHHHHHHHH----HCcCCCCCCCCcC
Confidence 789999998872 566789999999999876541 1126899998654
No 157
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.45 E-value=5 Score=31.95 Aligned_cols=44 Identities=25% Similarity=0.501 Sum_probs=33.8
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
....|.+|...+. . +-..|.|.+|..|-.... .....|.+|...
T Consensus 14 ~~~~C~IC~~~~~------------~-~~~~CgH~fc~~Ci~~~~-----~~~~~CP~Cr~~ 57 (70)
T 2ecn_A 14 DEEECCICMDGRA------------D-LILPCAHSFCQKCIDKWS-----DRHRNCPICRLQ 57 (70)
T ss_dssp CCCCCSSSCCSCC------------S-EEETTTEEECHHHHHHSS-----CCCSSCHHHHHC
T ss_pred CCCCCeeCCcCcc------------C-cccCCCCcccHHHHHHHH-----HCcCcCCCcCCc
Confidence 4588999999887 2 456799999999987664 345679999754
No 158
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=44.21 E-value=4.9 Score=34.18 Aligned_cols=47 Identities=15% Similarity=0.363 Sum_probs=32.5
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAE 194 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~ 194 (754)
.+..|.+|...|. .+. ......|+|..|..|-..-. ...-.|.+|..
T Consensus 39 ~~~~C~IC~~~~~--------~~~-~~~~l~C~H~Fh~~Ci~~wl-----~~~~~CP~Cr~ 85 (91)
T 2l0b_A 39 QEMCCPICCSEYV--------KGD-VATELPCHHYFHKPCVSIWL-----QKSGTCPVCRC 85 (91)
T ss_dssp SCSEETTTTEECC--------TTC-EEEEETTTEEEEHHHHHHHH-----TTTCBCTTTCC
T ss_pred CCCCCcccChhhc--------CCC-cEEecCCCChHHHHHHHHHH-----HcCCcCcCcCc
Confidence 4588999999987 222 23334599999999976553 12237999974
No 159
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=43.48 E-value=9.3 Score=32.84 Aligned_cols=55 Identities=16% Similarity=0.527 Sum_probs=37.1
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhhhhhhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETREMWKK 201 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~rel~~~ 201 (754)
++..|..|++.=. -..|-.|-.-.=..|-.... ...+++.|.|..|.....++..
T Consensus 24 n~~~C~vC~~~g~------------LL~CD~C~~~fH~~Cl~PpL-~~~P~g~W~C~~C~~~~~~ke~ 78 (88)
T 1fp0_A 24 SATICRVCQKPGD------------LVMCNQCEFCFHLDCHLPAL-QDVPGEEWSCSLCHVLPDLKEE 78 (88)
T ss_dssp SSSCCSSSCSSSC------------CEECTTSSCEECTTSSSTTC-CCCCSSSCCCCSCCCCCSSCCS
T ss_pred CCCcCcCcCCCCC------------EEECCCCCCceecccCCCCC-CCCcCCCcCCccccCCCccchh
Confidence 5678999997532 34577777666666664332 2446789999999877665543
No 160
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.15 E-value=5.4 Score=32.70 Aligned_cols=51 Identities=18% Similarity=0.442 Sum_probs=34.0
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccC-CCCCCceeeccchhhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSA-SKKENIWLCKICAETR 196 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~-~~~~~~WlC~vC~~~r 196 (754)
....|.+|...+.. .+-..|.|.+|..|-...... ........|.+|...-
T Consensus 18 ~~~~C~IC~~~~~~------------p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecv_A 18 EEVTCPICLELLTQ------------PLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISY 69 (85)
T ss_dssp CCCCCTTTCSCCSS------------CBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSS
T ss_pred CCCCCCCCCcccCC------------ceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCcc
Confidence 45789999998871 122369999999998765310 0012367899998653
No 161
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.10 E-value=5 Score=31.65 Aligned_cols=46 Identities=17% Similarity=0.411 Sum_probs=33.2
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
.+..|.+|...+. ..+-..|.|..|..|-.... ......|.+|...
T Consensus 14 ~~~~C~IC~~~~~------------~p~~~~CgH~fC~~Ci~~~~----~~~~~~CP~Cr~~ 59 (66)
T 2ecy_A 14 DKYKCEKCHLVLC------------SPKQTECGHRFCESCMAALL----SSSSPKCTACQES 59 (66)
T ss_dssp CCEECTTTCCEES------------SCCCCSSSCCCCHHHHHHHH----TTSSCCCTTTCCC
T ss_pred cCCCCCCCChHhc------------CeeECCCCCHHHHHHHHHHH----HhCcCCCCCCCcC
Confidence 4588999998877 12225899999999987664 1345679998754
No 162
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=43.05 E-value=17 Score=35.98 Aligned_cols=25 Identities=28% Similarity=0.569 Sum_probs=15.2
Q ss_pred cccccccccccccCCCCCCceeeccchhh
Q psy7848 167 GGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 167 ~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
..+|..||.... + ..-|.|.+|.-.
T Consensus 171 ~~~C~~CG~i~~--g--~~p~~CP~C~~~ 195 (202)
T 1yuz_A 171 FHLCPICGYIHK--G--EDFEKCPICFRP 195 (202)
T ss_dssp EEECSSSCCEEE--S--SCCSBCTTTCCB
T ss_pred EEEECCCCCEEc--C--cCCCCCCCCCCC
Confidence 466777775543 1 334888888643
No 163
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=41.75 E-value=5.6 Score=32.38 Aligned_cols=46 Identities=11% Similarity=0.010 Sum_probs=33.6
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
.+-.|.+|+..|. .-+...|+|..|..|-...- ......|.+|...
T Consensus 7 ~~~~C~IC~~~~~------------~Pv~~~CgH~fc~~Ci~~~~----~~~~~~CP~C~~~ 52 (78)
T 1t1h_A 7 EYFRCPISLELMK------------DPVIVSTGQTYERSSIQKWL----DAGHKTCPKSQET 52 (78)
T ss_dssp SSSSCTTTSCCCS------------SEEEETTTEEEEHHHHHHHH----TTTCCBCTTTCCB
T ss_pred ccCCCCCcccccc------------CCEEcCCCCeecHHHHHHHH----HHCcCCCCCCcCC
Confidence 4578999999887 22334799999999987664 1235679998754
No 164
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=41.74 E-value=7.7 Score=31.45 Aligned_cols=51 Identities=20% Similarity=0.458 Sum_probs=34.4
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCC--CCCCceeeccchhhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSAS--KKENIWLCKICAETR 196 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~--~~~~~WlC~vC~~~r 196 (754)
.+..|.+|...|.. ..+ ..|+|..|..|-....... .......|.+|...-
T Consensus 11 ~~~~C~IC~~~~~~-----------p~~-l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~ 63 (79)
T 2egp_A 11 EEVTCPICLELLTE-----------PLS-LDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISY 63 (79)
T ss_dssp CCCEETTTTEECSS-----------CCC-CSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCC
T ss_pred cCCCCcCCCcccCC-----------eeE-CCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcC
Confidence 45789999998871 122 3699999999988654110 012367899998653
No 165
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=41.67 E-value=11 Score=30.07 Aligned_cols=56 Identities=23% Similarity=0.699 Sum_probs=38.0
Q ss_pred ccccccccccccCCCccccccccCCCCccccccccccccccccccccCC---CCCCceeeccchhhh
Q psy7848 133 AAAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSAS---KKENIWLCKICAETR 196 (754)
Q Consensus 133 ~~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~---~~~~~WlC~vC~~~r 196 (754)
.++..|..|+.... --.+.-..|..|...+=..|-.... .. .++..|.|..|....
T Consensus 4 ~~~~~C~vC~~~~~-------~~~~~ll~Cd~C~~~~H~~C~~p~l-~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 4 GSSGVCTICQEEYS-------EAPNEMVICDKCGQGYHQLCHTPHI-DSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCCCBSSSCCCCC-------BTTBCEEECSSSCCEEETTTSSSCC-CHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCC-------CCCCCEEECCCCChHHHhhhCCCcc-cccccCCCCCEECCCCcCcc
Confidence 35688999998754 2345567888888777777765421 11 146789999997643
No 166
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=41.57 E-value=5.2 Score=32.47 Aligned_cols=47 Identities=19% Similarity=0.540 Sum_probs=33.4
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAE 194 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~ 194 (754)
.+..|.+|...|.. .++-..|.|..|..|-..... ......|.+|.+
T Consensus 14 ~~~~C~IC~~~~~~-----------p~~~~~CgH~fC~~Ci~~~~~---~~~~~~CP~Cr~ 60 (74)
T 2yur_A 14 DELLCLICKDIMTD-----------AVVIPCCGNSYCDECIRTALL---ESDEHTCPTCHQ 60 (74)
T ss_dssp GGGSCSSSCCCCTT-----------CEECSSSCCEECTTHHHHHHH---HSSSSCCSSSCC
T ss_pred CCCCCcCCChHHhC-----------CeEcCCCCCHHHHHHHHHHHH---hcCCCcCCCCCC
Confidence 45889999888771 333344999999999876641 122468999987
No 167
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=41.21 E-value=4.6 Score=33.16 Aligned_cols=50 Identities=16% Similarity=0.475 Sum_probs=33.9
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCC-CCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSAS-KKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~-~~~~~WlC~vC~~~ 195 (754)
.+..|.+|...|.. ..+ ..|.|.+|..|-....... .......|.+|...
T Consensus 18 ~~~~C~IC~~~~~~-----------p~~-~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~ 68 (85)
T 2ecw_A 18 EEVTCPICLELLKE-----------PVS-ADCNHSFCRACITLNYESNRNTDGKGNCPVCRVP 68 (85)
T ss_dssp TTTSCTTTCSCCSS-----------CEE-CTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCC
T ss_pred cCCCCcCCChhhCc-----------cee-CCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCc
Confidence 45789999988871 123 3599999999987653100 01236889999765
No 168
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=41.00 E-value=6.1 Score=33.56 Aligned_cols=21 Identities=29% Similarity=0.673 Sum_probs=16.7
Q ss_pred CCceeeccchhhhhhhhhccccccc
Q psy7848 184 ENIWLCKICAETREMWKKSNAWFFK 208 (754)
Q Consensus 184 ~~~WlC~vC~~~rel~~~sG~Wf~~ 208 (754)
.++|.|+-|.+. ...|+|-++
T Consensus 51 ~GIW~C~kCg~~----~AGGAy~~~ 71 (83)
T 3j21_i 51 TGIWQCQKCGAT----FAGGAYLPV 71 (83)
T ss_dssp TTEEEETTTCCE----EECCSSSSS
T ss_pred cCeEEcCCCCCE----EeCCccccC
Confidence 568999999875 678888876
No 169
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=40.98 E-value=14 Score=29.30 Aligned_cols=55 Identities=16% Similarity=0.457 Sum_probs=35.8
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETR 196 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~r 196 (754)
....|.+|+++.. -+..-++|..|....=..|-.........-..|.|..|...+
T Consensus 5 e~~~C~~C~~~~~--------~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~ 59 (64)
T 1we9_A 5 SSGQCGACGESYA--------ADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKS 59 (64)
T ss_dssp SCCCCSSSCCCCC--------SSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTT
T ss_pred CCCCCCCCCCccC--------CCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcC
Confidence 3478999999874 223467888887666666665543111112579999998754
No 170
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.40 E-value=3.8 Score=33.24 Aligned_cols=47 Identities=21% Similarity=0.403 Sum_probs=33.1
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAE 194 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~ 194 (754)
.+..|.+|...|. . ........|+|..|..|-.... .....|.+|..
T Consensus 22 ~~~~C~IC~~~~~--------~-~~~~~~l~C~H~fh~~Ci~~w~-----~~~~~CP~Cr~ 68 (75)
T 1x4j_A 22 EQTLCVVCMCDFE--------S-RQLLRVLPCNHEFHAKCVDKWL-----KANRTCPICRA 68 (75)
T ss_dssp SCCEETTTTEECC--------B-TCEEEEETTTEEEETTHHHHHH-----HHCSSCTTTCC
T ss_pred CCCCCeECCcccC--------C-CCeEEEECCCCHhHHHHHHHHH-----HcCCcCcCcCC
Confidence 4588999999987 1 1134556699999999976553 12247999964
No 171
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=40.08 E-value=4.9 Score=31.91 Aligned_cols=48 Identities=17% Similarity=0.241 Sum_probs=32.6
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
.+..|.+|...|. . ........|+|..|..|-.... .....|.+|...
T Consensus 13 ~~~~C~IC~~~~~--------~-~~~~~~~~C~H~fc~~Ci~~~~-----~~~~~CP~Cr~~ 60 (69)
T 2kiz_A 13 TEEKCTICLSILE--------E-GEDVRRLPCMHLFHQVCVDQWL-----ITNKKCPICRVD 60 (69)
T ss_dssp CCCSBTTTTBCCC--------S-SSCEEECTTSCEEEHHHHHHHH-----HHCSBCTTTCSB
T ss_pred CCCCCeeCCcccc--------C-CCcEEEeCCCCHHHHHHHHHHH-----HcCCCCcCcCcc
Confidence 4588999999876 1 1234455699999999987553 112359999653
No 172
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=39.77 E-value=9.1 Score=39.49 Aligned_cols=48 Identities=10% Similarity=0.232 Sum_probs=37.0
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeecc--chhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKI--CAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~v--C~~~ 195 (754)
.+-.|.+|+..|.- .+....|+|..|+.|=...-. ..+.|.|.+ |.+.
T Consensus 180 ~el~CPIcl~~f~D-----------PVts~~CGHsFcR~cI~~~~~---~~~~~~CPvtGCr~~ 229 (267)
T 3htk_C 180 IELTCPITCKPYEA-----------PLISRKCNHVFDRDGIQNYLQ---GYTTRDCPQAACSQV 229 (267)
T ss_dssp CCSBCTTTSSBCSS-----------EEEESSSCCEEEHHHHHHHST---TCSCEECSGGGCSCE
T ss_pred eeeECcCccCcccC-----------CeeeCCCCCcccHHHHHHHHH---hCCCCCCCcccccCc
Confidence 56899999999882 444568999999999876641 235699999 9874
No 173
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.77 E-value=10 Score=28.71 Aligned_cols=45 Identities=20% Similarity=0.524 Sum_probs=30.8
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccc
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKIC 192 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC 192 (754)
.+..|.+|...+. ..+-..|.|..|..|-..... .......|.+|
T Consensus 14 ~~~~C~IC~~~~~------------~p~~~~CgH~fC~~Ci~~~~~--~~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLK------------EPVIIECGHNFCKACITRWWE--DLERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCS------------SCCCCSSCCCCCHHHHHHHTT--SSCCSCCCSCC
T ss_pred cCCCCccCCcccC------------ccEeCCCCCccCHHHHHHHHH--hcCCCCCCCCC
Confidence 4578999999887 112257999999999876631 11234567766
No 174
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.72 E-value=6.2 Score=32.75 Aligned_cols=52 Identities=17% Similarity=0.418 Sum_probs=35.5
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
....|.+|...|. -.....+-..|.|.+|..|-..... .......|.+|...
T Consensus 14 ~~~~C~IC~~~~~--------~~~~~~~~~~CgH~fC~~Ci~~~~~--~~~~~~~CP~Cr~~ 65 (88)
T 2ct2_A 14 EVLECPICMESFT--------EEQLRPKLLHCGHTICRQCLEKLLA--SSINGVRCPFCSKI 65 (88)
T ss_dssp SCCBCTTTCCBCC--------TTSSCEEECSSSCEEEHHHHHHHHH--HCSSCBCCTTTCCC
T ss_pred CCCCCccCCcccc--------ccCCCeEECCCCChhhHHHHHHHHH--cCCCCcCCCCCCCc
Confidence 4578999999988 1121133347999999999876641 11235789999865
No 175
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=39.64 E-value=13 Score=32.97 Aligned_cols=41 Identities=22% Similarity=0.598 Sum_probs=31.4
Q ss_pred cccccccccCCCccccccccCCCCcccc-ccccccccccccccccCCCCCCceeeccchhh
Q psy7848 136 HACALCGDKFSPIFDRLGLFGAKCLVCH-DCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 136 ~~C~~C~~~~g~~~~~~~~~~~~~~~C~-~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
-.|.+|...|. .-+-. .|+|..|..|-.... . ..|.+|...
T Consensus 23 ~~C~IC~~~~~------------~pv~~~~CgH~fC~~Ci~~~~-----~--~~CP~Cr~~ 64 (117)
T 1jm7_B 23 LRCSRCTNILR------------EPVCLGGCEHIFCSNCVSDCI-----G--TGCPVCYTP 64 (117)
T ss_dssp TSCSSSCSCCS------------SCBCCCSSSCCBCTTTGGGGT-----T--TBCSSSCCB
T ss_pred CCCCCCChHhh------------CccEeCCCCCHHHHHHHHHHh-----c--CCCcCCCCc
Confidence 78999998877 22333 799999999987764 1 579999765
No 176
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.57 E-value=4.4 Score=33.44 Aligned_cols=46 Identities=26% Similarity=0.649 Sum_probs=33.3
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETR 196 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~r 196 (754)
....|.+|...|. ..+-..|.|..|..|-.... .....|.+|...-
T Consensus 14 ~~~~C~IC~~~~~------------~p~~~~CgH~fC~~Ci~~~~-----~~~~~CP~Cr~~~ 59 (81)
T 2csy_A 14 IPFRCFICRQAFQ------------NPVVTKCRHYFCESCALEHF-----RATPRCYICDQPT 59 (81)
T ss_dssp CCSBCSSSCSBCC------------SEEECTTSCEEEHHHHHHHH-----HHCSBCSSSCCBC
T ss_pred CCCCCcCCCchhc------------CeeEccCCCHhHHHHHHHHH-----HCCCcCCCcCccc
Confidence 3478999998887 12225799999999987664 2345799997653
No 177
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=39.32 E-value=5.9 Score=33.98 Aligned_cols=44 Identities=20% Similarity=0.514 Sum_probs=32.6
Q ss_pred cccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 136 HACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 136 ~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
-.|.+|...|.- .+....|+|..|..|-.... ...-.|.+|...
T Consensus 23 ~~C~IC~~~~~~-----------p~~~~~CgH~fC~~Ci~~~~-----~~~~~CP~Cr~~ 66 (99)
T 2y43_A 23 LRCGICFEYFNI-----------AMIIPQCSHNYCSLCIRKFL-----SYKTQCPTCCVT 66 (99)
T ss_dssp TBCTTTCSBCSS-----------EEECTTTCCEEEHHHHHHHH-----TTCCBCTTTCCB
T ss_pred CCcccCChhhCC-----------cCEECCCCCHhhHHHHHHHH-----HCCCCCCCCCCc
Confidence 789999988871 33445899999999987664 223579999864
No 178
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=38.44 E-value=4.9 Score=31.75 Aligned_cols=45 Identities=20% Similarity=0.443 Sum_probs=32.5
Q ss_pred ccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
+..|.+|...+.. ..+...|+|..|..|-.... .....|.+|...
T Consensus 5 ~~~C~IC~~~~~~-----------~~~~~~C~H~fc~~Ci~~~~-----~~~~~CP~Cr~~ 49 (68)
T 1chc_A 5 AERCPICLEDPSN-----------YSMALPCLHAFCYVCITRWI-----RQNPTCPLCKVP 49 (68)
T ss_dssp CCCCSSCCSCCCS-----------CEEETTTTEEESTTHHHHHH-----HHSCSTTTTCCC
T ss_pred CCCCeeCCccccC-----------CcEecCCCCeeHHHHHHHHH-----hCcCcCcCCChh
Confidence 4789999998871 23566799999999986653 123579999754
No 179
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=38.35 E-value=18 Score=28.30 Aligned_cols=51 Identities=18% Similarity=0.567 Sum_probs=34.9
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETRE 197 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~re 197 (754)
++..|..|+.. | .-..|-.|....=..|-.... ...+...|.|..|...+.
T Consensus 4 ~~~~C~vC~~~-g-----------~ll~Cd~C~~~fH~~Cl~ppl-~~~p~g~W~C~~C~~~~~ 54 (60)
T 2puy_A 4 HEDFCSVCRKS-G-----------QLLMCDTCSRVYHLDCLDPPL-KTIPKGMWICPRCQDQML 54 (60)
T ss_dssp CCSSCTTTCCC-S-----------SCEECSSSSCEECGGGSSSCC-SSCCCSCCCCHHHHHHHH
T ss_pred CCCCCcCCCCC-C-----------cEEEcCCCCcCEECCcCCCCc-CCCCCCceEChhccChhh
Confidence 45789999975 3 145677888776677766422 233567899999987653
No 180
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=38.02 E-value=27 Score=27.48 Aligned_cols=50 Identities=22% Similarity=0.520 Sum_probs=34.0
Q ss_pred ccccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 133 AAAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 133 ~~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
.++..|.+|+..-. -..|-.|....=..|-.... ...+...|.|..|...
T Consensus 7 ~~~~~C~vC~~~g~------------ll~Cd~C~~~fH~~Cl~ppl-~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 7 HHMEFCRVCKDGGE------------LLCCDTCPSSYHIHCLNPPL-PEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SSCSSCTTTCCCSS------------CBCCSSSCCCBCSSSSSSCC-SSCCSSCCCCTTTTTT
T ss_pred CCCCcCCCCCCCCC------------EEEcCCCCHHHcccccCCCc-CcCCCCccCChhhcCc
Confidence 35678999986322 45677888777777766422 2335678999999754
No 181
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=37.61 E-value=7.5 Score=33.63 Aligned_cols=21 Identities=33% Similarity=0.700 Sum_probs=16.6
Q ss_pred CCceeeccchhhhhhhhhccccccc
Q psy7848 184 ENIWLCKICAETREMWKKSNAWFFK 208 (754)
Q Consensus 184 ~~~WlC~vC~~~rel~~~sG~Wf~~ 208 (754)
.++|.|+-|.+ ....|+|-++
T Consensus 52 ~GIW~C~~Cg~----~~AGGAy~~~ 72 (92)
T 3iz5_m 52 VGIWGCKDCGK----VKAGGAYTMN 72 (92)
T ss_dssp TTEEECSSSCC----EEECCSSSSC
T ss_pred cceEEcCCCCC----EEeCCcccCC
Confidence 56899999987 4678888877
No 182
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=37.10 E-value=12 Score=28.58 Aligned_cols=43 Identities=23% Similarity=0.471 Sum_probs=30.0
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETR 196 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~r 196 (754)
.+-.|.+|...|. .-+-..|+|..|..|-... ...|.+|...-
T Consensus 5 ~~~~C~IC~~~~~------------~p~~l~CgH~fC~~Ci~~~--------~~~CP~Cr~~~ 47 (56)
T 1bor_A 5 QFLRCQQCQAEAK------------CPKLLPCLHTLCSGCLEAS--------GMQCPICQAPW 47 (56)
T ss_dssp CCSSCSSSCSSCB------------CCSCSTTSCCSBTTTCSSS--------SSSCSSCCSSS
T ss_pred cCCCceEeCCccC------------CeEEcCCCCcccHHHHccC--------CCCCCcCCcEe
Confidence 3478999998877 2234568999999986542 34688887543
No 183
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=36.14 E-value=7.3 Score=34.01 Aligned_cols=45 Identities=27% Similarity=0.640 Sum_probs=32.9
Q ss_pred ccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
+-.|.+|...|.. .+....|+|..|..|-.... ...-.|.+|...
T Consensus 15 ~~~C~IC~~~~~~-----------p~~~~~CgH~fC~~Ci~~~~-----~~~~~CP~Cr~~ 59 (108)
T 2ckl_A 15 HLMCVLCGGYFID-----------ATTIIECLHSFCKTCIVRYL-----ETSKYCPICDVQ 59 (108)
T ss_dssp GTBCTTTSSBCSS-----------EEEETTTCCEEEHHHHHHHH-----TSCSBCTTTCCB
T ss_pred cCCCccCChHHhC-----------cCEeCCCCChhhHHHHHHHH-----HhCCcCcCCCcc
Confidence 4789999988771 33445899999999987664 223679999754
No 184
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.88 E-value=11 Score=30.42 Aligned_cols=41 Identities=22% Similarity=0.573 Sum_probs=29.9
Q ss_pred cccccccccccCCCccccccccCCCCccccccccc-cccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGG-VCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~-vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
....|.+|...+. ..+-.-|+|. +|..|... .+.|.+|...
T Consensus 14 ~~~~C~IC~~~~~------------~~v~~pCgH~~~C~~C~~~---------~~~CP~CR~~ 55 (68)
T 2ea5_A 14 NSKDCVVCQNGTV------------NWVLLPCRHTCLCDGCVKY---------FQQCPMCRQF 55 (68)
T ss_dssp CSSCCSSSSSSCC------------CCEETTTTBCCSCTTHHHH---------CSSCTTTCCC
T ss_pred CCCCCCCcCcCCC------------CEEEECCCChhhhHHHHhc---------CCCCCCCCcc
Confidence 4589999998877 4555678887 88888762 3578888754
No 185
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=35.69 E-value=8.1 Score=33.42 Aligned_cols=21 Identities=24% Similarity=0.632 Sum_probs=16.5
Q ss_pred CCceeeccchhhhhhhhhccccccc
Q psy7848 184 ENIWLCKICAETREMWKKSNAWFFK 208 (754)
Q Consensus 184 ~~~WlC~vC~~~rel~~~sG~Wf~~ 208 (754)
-++|.|.-|.+ ....|+|-++
T Consensus 52 ~GIW~C~~C~~----~~AGGAy~~~ 72 (92)
T 3izc_m 52 AGIWTCSCCKK----TVAGGAYTVS 72 (92)
T ss_dssp TTEEECTTTCC----EEECCSSSSC
T ss_pred cceEEcCCCCC----EEeCCcccCC
Confidence 46899999987 4668888877
No 186
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.97 E-value=5.5 Score=32.07 Aligned_cols=46 Identities=15% Similarity=0.396 Sum_probs=32.1
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
....|.+|...|.- .+.-..|.|..|..|-.... ...-.|.+|.+.
T Consensus 14 ~~~~C~IC~~~~~~-----------p~~~~~CgH~fC~~Ci~~~~-----~~~~~CP~Cr~~ 59 (72)
T 2djb_A 14 PYILCSICKGYLID-----------ATTITECLHTFCKSCIVRHF-----YYSNRCPKCNIV 59 (72)
T ss_dssp GGGSCTTTSSCCSS-----------CEECSSSCCEECHHHHHHHH-----HHCSSCTTTCCC
T ss_pred CCCCCCCCChHHHC-----------cCEECCCCCHHHHHHHHHHH-----HcCCcCCCcCcc
Confidence 45789999988871 23334799999999986653 123568888654
No 187
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=34.43 E-value=10 Score=32.40 Aligned_cols=53 Identities=30% Similarity=0.579 Sum_probs=36.6
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETR 196 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~r 196 (754)
++..|..|+..-. --.+.-..|-.|..-+=..|-.... .+++.|+|..|....
T Consensus 24 ~~~~C~vC~~~~s-------~~~~~ll~CD~C~~~fH~~Cl~p~~---vP~g~W~C~~C~~~~ 76 (88)
T 2l43_A 24 EDAVCSICMDGES-------QNSNVILFCDMCNLAVHQECYGVPY---IPEGQWLCRHCLQSR 76 (88)
T ss_dssp CCCCCSSCCSSSS-------CSEEEEEECSSSCCCCCHHHHTCSS---CCSSCCCCHHHHHHT
T ss_pred CCCcCCcCCCCCC-------CCCCCEEECCCCCchhhcccCCCCc---cCCCceECccccCcc
Confidence 4588999997653 1334456788888777677765431 357899999998654
No 188
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=34.02 E-value=18 Score=35.25 Aligned_cols=50 Identities=18% Similarity=0.561 Sum_probs=35.2
Q ss_pred ccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETRE 197 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~re 197 (754)
+..|..|+..=. -..|..|-...-..|-.... ...+.+.|.|..|.....
T Consensus 2 ~~~C~~C~~~g~------------ll~Cd~C~~~~H~~Cl~p~l-~~~p~g~W~C~~C~~~~~ 51 (189)
T 2ro1_A 2 ATICRVCQKPGD------------LVMCNQCEFCFHLDCHLPAL-QDVPGEEWSCSLCHVLPD 51 (189)
T ss_dssp CCCBTTTCCCSS------------CCCCTTTCCBCCSTTSTTCC-SSCCCTTCCTTTTSCSCC
T ss_pred CCcCccCCCCCc------------eeECCCCCchhccccCCCCc-ccCCCCCCCCcCccCCCC
Confidence 467999986533 34588888888888875432 233578899999987643
No 189
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.87 E-value=9.2 Score=29.70 Aligned_cols=45 Identities=24% Similarity=0.558 Sum_probs=30.3
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccc
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKIC 192 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC 192 (754)
.+..|.+|...|. ..+-..|.|..|..|-..... .......|.+|
T Consensus 19 ~~~~C~IC~~~~~------------~p~~~~CgH~fC~~Ci~~~~~--~~~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDILQ------------KPVTIDCGHNFCLKCITQIGE--TSCGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBCS------------SCEECTTSSEECHHHHHHHHH--HCSSCCCCSCC
T ss_pred cCCCCCcCCchhC------------CeEEeCCCCcchHHHHHHHHH--cCCCCCcCcCC
Confidence 4589999998877 122237999999999876641 11234567766
No 190
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=33.10 E-value=28 Score=33.74 Aligned_cols=46 Identities=4% Similarity=-0.181 Sum_probs=30.9
Q ss_pred ccccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchh
Q psy7848 133 AAAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAE 194 (754)
Q Consensus 133 ~~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~ 194 (754)
..+-.|.+|+..|. --++..|+|..|+.|=...-. ..+. .|.+|..
T Consensus 104 p~~f~CPI~~elm~------------DPV~~~~Ghtfer~~I~~~l~---~~~~-tcP~t~~ 149 (179)
T 2f42_A 104 PDYLCGKISFELMR------------EPCITPSGITYDRKDIEEHLQ---RVGH-FDPVTRS 149 (179)
T ss_dssp CGGGBCTTTCSBCS------------SEEECTTSCEEEHHHHHHHHH---HTCS-BCTTTCC
T ss_pred cHhhcccCccccCC------------CCeECCCCCEECHHHHHHHHH---hCCC-CCCCCcC
Confidence 46689999999988 445556888888888655531 0111 4777764
No 191
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=33.09 E-value=21 Score=28.59 Aligned_cols=50 Identities=20% Similarity=0.555 Sum_probs=33.3
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETR 196 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~r 196 (754)
++..|..|+..-. -..|-.|....=..|-.... ...+...|.|..|...+
T Consensus 7 ~~~~C~vC~~~g~------------ll~CD~C~~~fH~~Cl~ppl-~~~P~g~W~C~~C~~~~ 56 (66)
T 1xwh_A 7 NEDECAVCRDGGE------------LICCDGCPRAFHLACLSPPL-REIPSGTWRCSSCLQAT 56 (66)
T ss_dssp CCCSBSSSSCCSS------------CEECSSCCCEECTTTSSSCC-SSCCSSCCCCHHHHHTC
T ss_pred CCCCCccCCCCCC------------EEEcCCCChhhcccccCCCc-CcCCCCCeECccccCcc
Confidence 5688999997422 45677777666666665321 23356789999997643
No 192
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=32.29 E-value=27 Score=27.63 Aligned_cols=33 Identities=21% Similarity=0.768 Sum_probs=25.4
Q ss_pred Cccccc--cccccccccccccccCCCCCCceeeccchhhh
Q psy7848 159 CLVCHD--CRGGVCQKCGIESVSASKKENIWLCKICAETR 196 (754)
Q Consensus 159 ~~~C~~--C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~r 196 (754)
-..|.. |+-++..-|.+... ...|.|.+|...-
T Consensus 9 pvRC~r~~CraylNP~~~~~~~-----~~~W~C~~C~~~N 43 (59)
T 2yrc_A 9 PVLCSRTTCRAVLNPLCQVDYR-----AKLWACNFCYQRN 43 (59)
T ss_dssp CCBCSCTTTCCBCCTTSEEEGG-----GTEEECSSSCCEE
T ss_pred CcccCCCCCCeEECCceEEECC-----CCEEEcccCCCcC
Confidence 567877 88888888888663 4689999997543
No 193
>3v2d_5 50S ribosomal protein L32; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_4 2hgj_4 2hgu_4 2j03_5 2jl6_5 2jl8_5 2v47_5 2v49_5 2wdi_5 2wdj_5 2wdl_5 2wdn_5 2wh2_5 2wh4_5 2wrj_5 2wrl_5 2wro_5 2wrr_5 2x9s_5 2x9u_5 ...
Probab=31.88 E-value=13 Score=29.58 Aligned_cols=24 Identities=29% Similarity=0.677 Sum_probs=18.1
Q ss_pred ccccccccccCCCccccccccCCCCcccccccccccccccccc
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIES 177 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~ 177 (754)
-..|..||+..-+ |+||..||.|-
T Consensus 30 l~~c~~cGe~~~~-------------------H~vc~~CG~Y~ 53 (60)
T 3v2d_5 30 LVPCPECKAMKPP-------------------HTVCPECGYYA 53 (60)
T ss_dssp CEECTTTCCEECT-------------------TSCCTTTCEET
T ss_pred eeECCCCCCeecc-------------------eEEcCCCCcCC
Confidence 4778888887663 78888888765
No 194
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=30.89 E-value=11 Score=35.00 Aligned_cols=46 Identities=17% Similarity=0.406 Sum_probs=34.5
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
.+-.|.+|...|.. .++ ..|+|..|..|-.... ......|.+|...
T Consensus 30 ~~~~C~IC~~~~~~-----------pv~-~~CgH~FC~~Ci~~~~----~~~~~~CP~Cr~~ 75 (141)
T 3knv_A 30 AKYLCSACRNVLRR-----------PFQ-AQCGHRYCSFCLASIL----SSGPQNCAACVHE 75 (141)
T ss_dssp GGGBCTTTCSBCSS-----------EEE-CTTSCEEEHHHHHHHG----GGSCEECHHHHHT
T ss_pred cCcCCCCCChhhcC-----------cEE-CCCCCccCHHHHHHHH----hcCCCCCCCCCCc
Confidence 45789999988871 233 4899999999987764 2345689999874
No 195
>2zjr_Z 50S ribosomal protein L32; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: g.41.8.5 PDB: 1j5a_M* 1jzy_M* 1jzz_M* 1k01_M* 1nkw_Z 1ond_Z* 1sm1_Z* 1yl3_5 2b66_5 2b9n_5 2b9p_5 2zjp_Y* 2zjq_Z 1jzx_M 3cf5_Y* 3dll_Y* 3pio_Z* 3pip_Z* 1nwy_Z* 1nwx_Z* ...
Probab=30.30 E-value=16 Score=29.11 Aligned_cols=24 Identities=25% Similarity=0.621 Sum_probs=17.8
Q ss_pred ccccccccccCCCccccccccCCCCcccccccccccccccccc
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIES 177 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~ 177 (754)
-..|..||+..-+ |+||..||.|-
T Consensus 30 l~~c~~cG~~~~p-------------------H~vc~~CG~Y~ 53 (60)
T 2zjr_Z 30 LTECPQCHGKKLS-------------------HHICPNCGYYD 53 (60)
T ss_dssp CEECTTTCCEECT-------------------TBCCTTTCBSS
T ss_pred ceECCCCCCEeCC-------------------ceEcCCCCcCC
Confidence 3677888877652 78888888765
No 196
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.16 E-value=8.7 Score=30.86 Aligned_cols=47 Identities=26% Similarity=0.510 Sum_probs=31.2
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAE 194 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~ 194 (754)
.+..|.+|...|. .... ..-..|.|..|..|-.... ...-.|.+|..
T Consensus 14 ~~~~C~IC~~~~~--------~~~~-~~~~~C~H~f~~~Ci~~~~-----~~~~~CP~Cr~ 60 (74)
T 2ep4_A 14 LHELCAVCLEDFK--------PRDE-LGICPCKHAFHRKCLIKWL-----EVRKVCPLCNM 60 (74)
T ss_dssp CSCBCSSSCCBCC--------SSSC-EEEETTTEEEEHHHHHHHH-----HHCSBCTTTCC
T ss_pred CCCCCcCCCcccC--------CCCc-EEEcCCCCEecHHHHHHHH-----HcCCcCCCcCc
Confidence 4588999999987 1111 1112599999999987653 11237999964
No 197
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.02 E-value=42 Score=28.77 Aligned_cols=64 Identities=20% Similarity=0.467 Sum_probs=39.5
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhhhhhhhccccccc
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETREMWKKSNAWFFK 208 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~rel~~~sG~Wf~~ 208 (754)
+...|.+|+..-. .+.-..|-.|....=..|-.... ...+...|.|..|.... .++..+..=|+
T Consensus 15 ~~~~C~vC~~~~~---------~~~ll~CD~C~~~~H~~Cl~Ppl-~~~P~g~W~C~~C~~~~-~~~~~~~~Gf~ 78 (92)
T 2e6r_A 15 DSYICQVCSRGDE---------DDKLLFCDGCDDNYHIFCLLPPL-PEIPRGIWRCPKCILAE-CKQPPEAFGFE 78 (92)
T ss_dssp CCCCCSSSCCSGG---------GGGCEECTTTCCEECSSSSSSCC-SSCCSSCCCCHHHHHHH-HSCCSSCCSCC
T ss_pred CCCCCccCCCcCC---------CCCEEEcCCCCchhccccCCCCc-ccCCCCCcCCccCcCcc-ccCCccccChh
Confidence 5578999987532 12356777777666566665221 23356789999998765 34444544444
No 198
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=29.88 E-value=20 Score=29.64 Aligned_cols=21 Identities=29% Similarity=0.727 Sum_probs=15.9
Q ss_pred CCceeeccchhhhhhhhhccccccc
Q psy7848 184 ENIWLCKICAETREMWKKSNAWFFK 208 (754)
Q Consensus 184 ~~~WlC~vC~~~rel~~~sG~Wf~~ 208 (754)
.++|.|+-|.+. ...|+|-++
T Consensus 42 ~GIW~C~~C~~~----~AGGAy~~~ 62 (72)
T 3jyw_9 42 AGIWTCSCCKKT----VAGGAYTVS 62 (72)
T ss_dssp SSCBCCSSSCCC----CCCSSSSSC
T ss_pred CCeEECCCCCCE----EeCCccccC
Confidence 568888888753 567888776
No 199
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=29.84 E-value=20 Score=30.50 Aligned_cols=56 Identities=21% Similarity=0.573 Sum_probs=38.2
Q ss_pred ccccccccccCCCccccccccCCCCccccccccccccccccccccC---CCCCCceeeccchhhhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSA---SKKENIWLCKICAETRE 197 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~---~~~~~~WlC~vC~~~re 197 (754)
...|.+|+..-. ...+.-.+|-.|..-+=..|-..-... ..++..|.|..|.....
T Consensus 16 ~~~C~vC~~~~~-------~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~ 74 (88)
T 1wev_A 16 GLACVVCRQMTV-------ASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp CCSCSSSCCCCC-------CTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CCcCCCCCCCCC-------CCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhh
Confidence 468999998643 233456778888888877887643200 13577899999987654
No 200
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.47 E-value=26 Score=28.35 Aligned_cols=39 Identities=23% Similarity=0.632 Sum_probs=27.6
Q ss_pred cccccccccCCCccccccccCCCCccccccccc-cccccccccccCCCCCCceeeccchhh
Q psy7848 136 HACALCGDKFSPIFDRLGLFGAKCLVCHDCRGG-VCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 136 ~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~-vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
..|.+|...+. ..+-..|.|. +|..|... ...|.+|...
T Consensus 26 ~~C~IC~~~~~------------~~~~~pCgH~~~C~~C~~~---------~~~CP~Cr~~ 65 (75)
T 2ecg_A 26 KLCKICMDRNI------------AIVFVPCGHLVTCKQCAEA---------VDKCPMCYTV 65 (75)
T ss_dssp HSCSSSCSSCC------------CBCCSSSCCCCBCHHHHHH---------CSBCTTTCCB
T ss_pred CCCCcCCCCCC------------CEEEecCCCHHHHHHHhhC---------CCCCccCCce
Confidence 67999998877 3344578888 88888632 2568888754
No 201
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=29.41 E-value=19 Score=30.41 Aligned_cols=36 Identities=22% Similarity=0.394 Sum_probs=26.5
Q ss_pred cccccccccCCCccccccccCCCCcccccccccccccccccc
Q psy7848 136 HACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIES 177 (754)
Q Consensus 136 ~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~ 177 (754)
+-|..|+..+.. --+...+.|..|++..|-.|++.-
T Consensus 26 ~wCP~C~~~~~~------~~~~~~v~C~~C~~~FC~~C~~~w 61 (86)
T 2ct7_A 26 LWCAQCSFGFIY------EREQLEATCPQCHQTFCVRCKRQW 61 (86)
T ss_dssp ECCSSSCCCEEC------CCSCSCEECTTTCCEECSSSCSBC
T ss_pred eECcCCCchhee------cCCCCceEeCCCCCccccccCCch
Confidence 348888876641 123456899999999999999744
No 202
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=29.29 E-value=19 Score=29.02 Aligned_cols=49 Identities=22% Similarity=0.594 Sum_probs=33.5
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
....|..|++.=- -..|-.|.+..=..|-.... ...++..|.|..|...
T Consensus 11 ~~~~C~vC~~~~~------------ll~Cd~C~~~~H~~Cl~P~l-~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 11 PGARCGVCGDGTD------------VLRCTHCAAAFHWRCHFPAG-TSRPGTGLRCRSCSGD 59 (66)
T ss_dssp TTCCCTTTSCCTT------------CEECSSSCCEECHHHHCTTT-CCCCSSSCCCTTTTTC
T ss_pred CCCCcCCCCCCCe------------EEECCCCCCceecccCCCcc-CcCCCCCEECccccCC
Confidence 3467999986422 46788888888778864222 2345778999999754
No 203
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=29.26 E-value=73 Score=29.99 Aligned_cols=92 Identities=17% Similarity=0.117 Sum_probs=50.6
Q ss_pred cceeeccccccccccCCCCCCCCceEEEEecCCCCcc---eeeeeee-cCCCC-CccceeEEEEeecCccCC-CeEEEEE
Q psy7848 628 RALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKR---KYKTGVK-WKTLN-PIFNEEFAIETKITELSK-QTLVITV 701 (754)
Q Consensus 628 g~L~V~V~~A~nL~~~d~~G~sDPYVKV~L~~~~~k~---k~KT~v~-kkTlN-P~wNEtF~F~V~~~dL~~-~~L~ItV 701 (754)
-.|.|.|..- +|. |.....|||+.|++.+..+.- .+.|.+- ....| =.||-++....+.+.+.. ..|.+++
T Consensus 14 t~l~v~Ie~i-glk--da~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~G~aivfEl 90 (152)
T 2qzq_A 14 TLLTLTIEKI-GLK--DAGQCIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLPKGAAIFFEF 90 (152)
T ss_dssp CEEEEEEEEE-ECT--TGGGCEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSCTTCEEEEEE
T ss_pred eEEEEEEEEE-EeC--CHHHccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCCCCcEEEEEE
Confidence 3444544443 442 344458999999998766553 6677764 22222 245554444445555543 5677888
Q ss_pred EEccCCCCCc-eeEEEEEecCC
Q psy7848 702 WDKDYGKSND-YLGCLELCCNS 722 (754)
Q Consensus 702 ~D~d~~~~dd-fLG~v~L~l~s 722 (754)
.++....+-. ....+-+.++.
T Consensus 91 kH~k~kkkk~S~kCw~f~~~d~ 112 (152)
T 2qzq_A 91 KHYKPKKRFTSTKCFAFMEMDE 112 (152)
T ss_dssp EEEETTTTEEEEEEEEEEEGGG
T ss_pred EEecccceeeeeeeEEEEEhhh
Confidence 8776543211 23334444443
No 204
>3gox_A Restriction endonuclease HPY99I; endonuclease-DNA complex, restriction enzyme, HPY99I, pseudopalindrome; HET: 1PE; 1.50A {Helicobacter pylori} PDB: 3fc3_A*
Probab=28.93 E-value=13 Score=36.39 Aligned_cols=40 Identities=20% Similarity=0.408 Sum_probs=22.9
Q ss_pred hhhhccCCCccccccccccccCCCccccccc----cCC---CCcccccccc
Q psy7848 124 MKRNVTGGAAAAHACALCGDKFSPIFDRLGL----FGA---KCLVCHDCRG 167 (754)
Q Consensus 124 ~k~~~~~~~~~~~~C~~C~~~~g~~~~~~~~----~~~---~~~~C~~C~~ 167 (754)
|-+.+++ .+.+.|..|++... ...+.. .++ ..-.|.+|++
T Consensus 66 ~~~~~~~--~G~K~C~~Cg~~Kp--~seF~rnkt~~DG~~~l~s~CkeC~~ 112 (200)
T 3gox_A 66 IYRTGKG--YDKKICNICHILKN--TDGFEINQTDAKGRKTTRPSCRECRK 112 (200)
T ss_dssp GGGSSTT--SSEEECTTTCBEEE--GGGSCEEEECTTSCEEECSSCHHHHH
T ss_pred eeecccc--CCCeECCCCCCCcc--hhhhcccccCCCCCcccCccChhhhh
Confidence 3444444 44599999999765 111000 122 3468999964
No 205
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=28.55 E-value=9 Score=32.21 Aligned_cols=48 Identities=19% Similarity=0.532 Sum_probs=33.4
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
.+-.|.+|...|.. .++-..|.|..|..|-..... ......|.+|...
T Consensus 12 ~~~~C~IC~~~~~~-----------p~~~~~CgH~fC~~Ci~~~~~---~~~~~~CP~Cr~~ 59 (92)
T 3ztg_A 12 DELLCLICKDIMTD-----------AVVIPCCGNSYCDECIRTALL---ESDEHTCPTCHQN 59 (92)
T ss_dssp TTTEETTTTEECSS-----------CEECTTTCCEECHHHHHHHHH---HCTTCCCTTTCCS
T ss_pred cCCCCCCCChhhcC-----------ceECCCCCCHHHHHHHHHHHH---hcCCCcCcCCCCc
Confidence 45789999988771 233344999999999765531 1234689999865
No 206
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=28.45 E-value=29 Score=33.36 Aligned_cols=50 Identities=20% Similarity=0.647 Sum_probs=34.5
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETR 196 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~r 196 (754)
++..|..|+.. | .-..|-.|..-.-..|-.... ...+.+.|.|..|....
T Consensus 3 ~~~~C~~C~~~-g-----------~ll~Cd~C~~~~H~~C~~p~l-~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 3 NEDWCAVCQNG-G-----------ELLCCEKCPKVFHLSCHVPTL-TNFPSGEWICTFCRDLS 52 (184)
T ss_dssp SCSSCTTTCCC-S-----------SCEECSSSSCEECTTTSSSCC-SSCCSSCCCCTTTSCSS
T ss_pred CCCccccCCCC-C-----------eeeecCCCCcccCccccCCCC-CCCCCCCEECccccCcc
Confidence 34679999865 3 146788888888888854432 23356789999998653
No 207
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=28.27 E-value=25 Score=27.67 Aligned_cols=49 Identities=18% Similarity=0.514 Sum_probs=32.2
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
++..|..|++.-. -..|-.|....=..|-.... ...++..|.|..|.+.
T Consensus 10 ~~~~C~vC~~~g~------------ll~CD~C~~~fH~~Cl~p~l-~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 10 HQDYCEVCQQGGE------------IILCDTCPRAYHMVCLDPDM-EKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CCSSCTTTSCCSS------------EEECSSSSCEEEHHHHCTTC-CSCCCSSCCCTTGGGG
T ss_pred CCCCCccCCCCCc------------EEECCCCChhhhhhccCCCC-CCCCCCceECcccccc
Confidence 4578999987422 34577777666666655422 2335778999999764
No 208
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=27.97 E-value=11 Score=33.01 Aligned_cols=61 Identities=13% Similarity=0.244 Sum_probs=34.2
Q ss_pred ccccccccccCCCcccccccc----CC--CCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLF----GA--KCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~----~~--~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
+..|.+|...|..--...... .. .......|.|..|..|-..-.........-.|-+|...
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~ 91 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTI 91 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCB
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCc
Confidence 468999999986100000000 00 01125679999999997654211111345689999753
No 209
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.64 E-value=4.3 Score=31.96 Aligned_cols=49 Identities=24% Similarity=0.646 Sum_probs=33.0
Q ss_pred cccccccccccCCCcccccccc--CCCCccccccccccccccccccccCCCCCCceeeccchh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLF--GAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAE 194 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~--~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~ 194 (754)
....|.+|...|. -. .....+-..|.|.+|..|-.... ...-.|.+|..
T Consensus 14 ~~~~C~IC~~~~~-------~~~~~~~~~~~~~CgH~fc~~Ci~~~~-----~~~~~CP~Cr~ 64 (69)
T 2ea6_A 14 GTVSCPICMDGYS-------EIVQNGRLIVSTECGHVFCSQCLRDSL-----KNANTCPTCRK 64 (69)
T ss_dssp CCCCCTTTCCCHH-------HHTTTTCCEEECSSSCEEEHHHHHHHH-----HHCSSCTTTCC
T ss_pred CCCCCcccCcccc-------ccccccCCeEeCCCCChhcHHHHHHHH-----HcCCCCCCCCC
Confidence 4588999999876 11 11223567899999999986653 11346888864
No 210
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=27.50 E-value=4.7 Score=32.07 Aligned_cols=52 Identities=23% Similarity=0.590 Sum_probs=34.0
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
.+..|.+|.+.+.. . .-.....+...|+|..|..|-..... ..-.|.+|...
T Consensus 9 ~~~~C~IC~~~~~~---~--~~~~~~~~~~~CgH~fc~~Ci~~~~~-----~~~~CP~Cr~~ 60 (71)
T 3ng2_A 9 GTVSCPICMDGYSE---I--VQNGRLIVSTECGHVFCSQCLRDSLK-----NANTCPTCRKK 60 (71)
T ss_dssp TCCBCTTTCCBHHH---H--HTTTCCEEECTTSCEEEHHHHHHHHH-----HCSBCTTTCCB
T ss_pred CCCCCcccChhhhc---c--ccccCCeEeCCCCChHhHHHHHHHHH-----cCCCCCCCCCc
Confidence 45889999998871 0 00122336778999999999866531 12378888653
No 211
>2kgo_A Uncharacterized protein YBII; Zn finger, partially disordered, structural proteomics, META binding, zinc-finger, structural genomics; NMR {Escherichia coli}
Probab=27.38 E-value=23 Score=31.57 Aligned_cols=16 Identities=25% Similarity=0.702 Sum_probs=10.7
Q ss_pred ceeeccchhhhhhhhh
Q psy7848 186 IWLCKICAETREMWKK 201 (754)
Q Consensus 186 ~WlC~vC~~~rel~~~ 201 (754)
..+|.-|+...|...+
T Consensus 77 a~~Cv~Cq~~~E~~~k 92 (108)
T 2kgo_A 77 VRLCIHCQQEKDLQKP 92 (108)
T ss_dssp CCSCHHHHHHHHHHCC
T ss_pred ccccHHHHHHHHHHHH
Confidence 5677777777776544
No 212
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=27.31 E-value=11 Score=41.08 Aligned_cols=44 Identities=16% Similarity=0.385 Sum_probs=33.0
Q ss_pred cccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 136 HACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 136 ~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
..|.+|...+. ..+...|+|..|..|-.... ....-.|.+|...
T Consensus 333 ~~C~ICle~~~------------~pv~lpCGH~FC~~Ci~~wl----~~~~~~CP~CR~~ 376 (389)
T 2y1n_A 333 QLCKICAENDK------------DVKIEPCGHLMCTSCLTSWQ----ESEGQGCPFCRCE 376 (389)
T ss_dssp SBCTTTSSSBC------------CEEEETTCCEECHHHHHHHH----HHTCSBCTTTCCB
T ss_pred CCCCccCcCCC------------CeEEeCCCChhhHHHHHHHH----hcCCCCCCCCCCc
Confidence 78999988887 55778899999999986553 1123479999753
No 213
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=26.90 E-value=4.7 Score=31.22 Aligned_cols=49 Identities=24% Similarity=0.634 Sum_probs=33.5
Q ss_pred ccccccccccCCCcccccccc--CCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLF--GAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~--~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
+..|.+|...+. -. .....+...|+|..|..|-.... .....|.+|...
T Consensus 3 ~~~C~IC~~~~~-------~~~~~~~~~~~~~CgH~fc~~Ci~~~~-----~~~~~CP~Cr~~ 53 (64)
T 2xeu_A 3 MVSCPICMDGYS-------EIVQNGRLIVSTECGHVFCSQCLRDSL-----KNANTCPTCRKK 53 (64)
T ss_dssp CCBCTTTCCBHH-------HHHHTTCCEEEETTSCEEEHHHHHHHH-----HHCSBCTTTCCB
T ss_pred CCCCCccChhhh-------CccccCCCEEeCCCCCchhHHHHHHHH-----HcCCCCCCCCcc
Confidence 468999999886 11 12233667899999999987653 123478888754
No 214
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=26.79 E-value=36 Score=33.08 Aligned_cols=49 Identities=14% Similarity=0.215 Sum_probs=26.8
Q ss_pred HHHHHHhhHHHhHHHHHHHHHHHHHHHHhhhhccCCCccccccccccccC
Q psy7848 96 IEEVIKRAEALDYIEQERVGRLVERVDNMKRNVTGGAAAAHACALCGDKF 145 (754)
Q Consensus 96 I~~Vl~R~~~l~~~E~~Ri~~L~~~l~~~k~~~~~~~~~~~~C~~C~~~~ 145 (754)
+...|+-.-+.++.+++|.++|.++|+.-+-- .......-.|..||-.+
T Consensus 117 ~~~~f~~~~~~E~ehe~~~~~~l~~l~~~~~~-~~~~~~~~~C~~CG~~~ 165 (191)
T 1lko_A 117 IARVFASIAVAEEFHEKRFLDFARNIKEGRVF-LREQATKWRCRNCGYVH 165 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-EEEEEEEEEETTTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccc-ccCCCceEEECCCCCEe
Confidence 44555555556677777788877776642210 00111136677776554
No 215
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=26.76 E-value=19 Score=30.47 Aligned_cols=49 Identities=22% Similarity=0.457 Sum_probs=31.9
Q ss_pred ccccccccccCCCccccccccCCCCccc---cccccccccccccccccCCCCC---Cceeecc--chhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVC---HDCRGGVCQKCGIESVSASKKE---NIWLCKI--CAET 195 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C---~~C~~~vC~~C~~~~~~~~~~~---~~WlC~v--C~~~ 195 (754)
...|.+|...+. .... ..|.|..|..|-...-...-.+ ....|.. |...
T Consensus 5 ~~~C~IC~~~~~------------~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 5 SSGCKLCLGEYP------------VEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp BCCCSSSCCCCB------------GGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CcCCcccCcccc------------cccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 478999998877 2233 3699999999965443100011 2468988 8765
No 216
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=26.51 E-value=22 Score=29.42 Aligned_cols=38 Identities=16% Similarity=0.462 Sum_probs=30.9
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccc
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESV 178 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~ 178 (754)
....|..|++.+- -++..|..|.+|+..|=++|....+
T Consensus 33 ~pt~C~~C~~~lw-------Gl~kqG~~C~~C~~~~Hk~C~~~v~ 70 (77)
T 2enn_A 33 QPTFCSVCHEFVW-------GLNKQGYQCRQCNAAIHKKCIDKVI 70 (77)
T ss_dssp SCEECSSSCCEEC-------CTTCCEEECSSSCCEEESGGGSSCC
T ss_pred CCcCccccChhhc-------cccccccCcCCCCCcCCHhHHhhCc
Confidence 4589999999875 3566799999999888888987764
No 217
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=25.73 E-value=24 Score=34.68 Aligned_cols=50 Identities=22% Similarity=0.594 Sum_probs=34.7
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETR 196 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~r 196 (754)
++..|..|+..=. -..|-.|....-..|-.... ...+.+.|.|..|....
T Consensus 6 ~~~~C~~C~~~g~------------ll~Cd~C~~~~H~~Cl~p~l-~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 6 NEDWCAVCQNGGD------------LLCCEKCPKVFHLTCHVPTL-LSFPSGDWICTFCRDIG 55 (207)
T ss_dssp SCSSBTTTCCCEE------------EEECSSSSCEECTTTSSSCC-SSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCCCc------------eEEcCCCCCccCCccCCCCC-CCCCCCCEEeCceeCcc
Confidence 4577999985422 45688888888888865432 23356789999998654
No 218
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=25.40 E-value=8.9 Score=34.10 Aligned_cols=46 Identities=20% Similarity=0.468 Sum_probs=32.4
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
.+-.|.+|...|.. .++ ..|+|..|..|-..... .....|.+|...
T Consensus 17 ~~~~C~IC~~~~~~-----------p~~-~~CgH~fC~~Ci~~~~~----~~~~~CP~Cr~~ 62 (118)
T 3hct_A 17 SKYECPICLMALRE-----------AVQ-TPCGHRFCKACIIKSIR----DAGHKCPVDNEI 62 (118)
T ss_dssp GGGBCTTTCSBCSS-----------EEE-CTTSCEEEHHHHHHHHH----HHCSBCTTTCCB
T ss_pred CCCCCCcCChhhcC-----------eEE-CCcCChhhHHHHHHHHh----hCCCCCCCCCCC
Confidence 45799999988871 223 36999999999876531 222489999654
No 219
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=25.31 E-value=1.1e+02 Score=28.94 Aligned_cols=71 Identities=15% Similarity=0.132 Sum_probs=48.8
Q ss_pred CCceEEEEecCCCCcceeeeeeecCCCCCccceeEEEEeecCcc-----CCCeEEEEEEEccCCCCCceeEEEEEecCC
Q psy7848 649 SDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKITEL-----SKQTLVITVWDKDYGKSNDYLGCLELCCNS 722 (754)
Q Consensus 649 sDPYVKV~L~~~~~k~k~KT~v~kkTlNP~wNEtF~F~V~~~dL-----~~~~L~ItV~D~d~~~~ddfLG~v~L~l~s 722 (754)
.+|..-+.+.-- .-..+-|.+.. ..+|.||-+-.|.|...++ ....|.|+|+... ...-..||.++|.+..
T Consensus 40 ~~p~tF~t~dF~-dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELhqa~-g~~~~tla~~~I~l~~ 115 (156)
T 2yrb_A 40 KEPVTFCTYAFY-DFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAY-STEYETIAACQLKFHE 115 (156)
T ss_dssp SCCEEEEEECST-TCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEEEEC-SSCEEEEEEEEECCSH
T ss_pred cCCcEEEEEEEe-ceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEEEee-CCCceEEEEEEEEhHH
Confidence 355554444211 12366777766 7899999999999865543 3468999998764 3345689999999873
No 220
>1914_A Signal recognition particle 9/14 fusion protein; ALU domain, RNA binding, signal recognition particle (SRP), translation regulation; 2.53A {Mus musculus} SCOP: d.49.1.1 d.49.1.1 PDB: 1e8o_A* 1e8s_A 1ry1_C*
Probab=24.88 E-value=20 Score=36.20 Aligned_cols=34 Identities=15% Similarity=0.022 Sum_probs=18.0
Q ss_pred hhHHHHHHHHhhhhhhhcccCCCcccchhhccccccCcee
Q psy7848 35 PIQESLTASVLRNRLVSFITSLSDVSLFGFVHRLQTGWSV 74 (754)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~ 74 (754)
-.|||+.|+.. =|-.+|+.-- +...-+...|.-+
T Consensus 152 sw~eF~~~s~~-----Ly~a~P~~tR-y~~KY~~~~g~Lv 185 (232)
T 1914_A 152 TWEEFSRAAEK-----LYLADPMKVR-VVLKYRHVDGNLC 185 (232)
T ss_dssp SHHHHHHHHHH-----HHHHCTTTCE-EEEEEETTTTEEE
T ss_pred CHHHHHHHHHH-----HHHhCCCceE-EEEEEEcCCceEE
Confidence 46888877643 2445565544 3444444445433
No 221
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=24.29 E-value=22 Score=28.17 Aligned_cols=36 Identities=31% Similarity=0.718 Sum_probs=28.6
Q ss_pred ccccccccccCCCccccccccCCCCccccccccccccccccccc
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESV 178 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~ 178 (754)
...|..|++..+ ++..+-.|.||+..+=.+|....+
T Consensus 19 ~~~C~~Cg~~i~--------~gkq~~kC~dC~~~cH~~C~~~~~ 54 (61)
T 4b6d_A 19 PESCVPCGKRIK--------FGKLSLKCRDCRVVSHPECRDRCP 54 (61)
T ss_dssp CEECTTTCCEEC--------TTCEEEEESSSSCEECGGGGGGSC
T ss_pred CcccccccCEEE--------EeeEeeECCCCCCeEchhHhhcCC
Confidence 378999988776 667789999999777677877664
No 222
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=23.99 E-value=88 Score=20.08 Aligned_cols=11 Identities=36% Similarity=0.673 Sum_probs=7.5
Q ss_pred HHHHHHHHHHH
Q psy7848 111 QERVGRLVERV 121 (754)
Q Consensus 111 ~~Ri~~L~~~l 121 (754)
|+|+++|..+|
T Consensus 14 qerlrklrkkl 24 (27)
T 3twe_A 14 QERLRKLRKKL 24 (27)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 56777777665
No 223
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=23.79 E-value=78 Score=27.58 Aligned_cols=35 Identities=23% Similarity=0.635 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHhhhhccCCCccccccccccccCC
Q psy7848 112 ERVGRLVERVDNMKRNVTGGAAAAHACALCGDKFS 146 (754)
Q Consensus 112 ~Ri~~L~~~l~~~k~~~~~~~~~~~~C~~C~~~~g 146 (754)
.++..+..++..+++...--......|+.||.++.
T Consensus 24 ~~~~~l~~~i~~l~~~l~~l~~~g~~CPvCgs~l~ 58 (112)
T 1l8d_A 24 QRIGELKNKIGDLKTAIEELKKAKGKCPVCGRELT 58 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSEECTTTCCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcCC
Confidence 34555666665555544200001267999988876
No 224
>2olm_A Nucleoporin-like protein RIP; arfgap, GTPase-activating protein, REV-interacting protein, human immunodeficiency virus, AIDS, structural genomics; 1.48A {Homo sapiens} PDB: 2d9l_A
Probab=23.46 E-value=46 Score=30.93 Aligned_cols=10 Identities=20% Similarity=0.677 Sum_probs=7.8
Q ss_pred cccccccccc
Q psy7848 135 AHACALCGDK 144 (754)
Q Consensus 135 ~~~C~~C~~~ 144 (754)
+..|+-|+.+
T Consensus 25 N~~CaDCg~~ 34 (140)
T 2olm_A 25 NRKCFDCDQR 34 (140)
T ss_dssp GGSCTTTCSS
T ss_pred CCcCCCCCCC
Confidence 4789999875
No 225
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=22.83 E-value=47 Score=27.36 Aligned_cols=26 Identities=23% Similarity=0.562 Sum_probs=17.8
Q ss_pred HHHHHHHHHHhhhhccCCCccccccccccccCC
Q psy7848 114 VGRLVERVDNMKRNVTGGAAAAHACALCGDKFS 146 (754)
Q Consensus 114 i~~L~~~l~~~k~~~~~~~~~~~~C~~C~~~~g 146 (754)
+|+++.++|...+. ...|..|+++--
T Consensus 12 lRK~vkkie~~q~~-------ky~C~fCgk~~v 37 (72)
T 3jyw_9 12 LRRQVKKLEIQQHA-------RYDCSFCGKKTV 37 (72)
T ss_dssp HHTTTHHHHHHHHS-------CBCCSSCCSSCB
T ss_pred HHHHHHHHHHHhcc-------CccCCCCCCcee
Confidence 56666666655443 389999998754
No 226
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=22.69 E-value=29 Score=42.05 Aligned_cols=35 Identities=17% Similarity=0.487 Sum_probs=26.0
Q ss_pred CccccccccccccccccccccCCCCCCceeeccchhhhhh
Q psy7848 159 CLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETREM 198 (754)
Q Consensus 159 ~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~rel 198 (754)
-..|..|+-+++.-|..... ...|.|.+|...-++
T Consensus 228 pvRC~rCrAYiNPf~~~~~~-----g~~W~CnfC~~~N~~ 262 (926)
T 1m2v_B 228 IVRCRRCRSYMNPFVTFIEQ-----GRRWRCNFCRLANDV 262 (926)
T ss_dssp CCBCSSSCCBCCTTCEEETT-----TTEEECTTTCCEEEC
T ss_pred CCccCCccCEecCceEEeCC-----CCEEEccCCCCCCCC
Confidence 36777788777777777552 568999999976554
No 227
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=22.68 E-value=22 Score=28.14 Aligned_cols=43 Identities=21% Similarity=0.580 Sum_probs=33.3
Q ss_pred cccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccc
Q psy7848 136 HACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKIC 192 (754)
Q Consensus 136 ~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC 192 (754)
+.|.-|+..|. -. ..-.|..|+...|-.|-++. .+..--|.-|
T Consensus 16 ~~C~~C~~~~~-------~~--~~y~C~~C~~~FC~dCD~fi-----He~Lh~CPgC 58 (59)
T 1z60_A 16 RFCYGCQGELK-------DQ--HVYVCAVCQNVFCVDCDVFV-----HDSLHSCPGC 58 (59)
T ss_dssp CEETTTTEECT-------TS--EEECCTTTTCCBCHHHHHTT-----TTTSCSSSTT
T ss_pred CcccccCcccC-------CC--ccEECCccCcCcccchhHHH-----HhhccCCcCC
Confidence 57999999986 11 12579999999999999998 3666667665
No 228
>2kq9_A DNAK suppressor protein; zinc binding protein, structural genomics, PSI-2, protein ST initiative; NMR {Agrobacterium tumefaciens str}
Probab=22.52 E-value=28 Score=31.00 Aligned_cols=50 Identities=20% Similarity=0.439 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCccccccccccccCCCccccccccCCCCcccccccc
Q psy7848 109 IEQERVGRLVERVDNMKRNVTGGAAAAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRG 167 (754)
Q Consensus 109 ~E~~Ri~~L~~~l~~~k~~~~~~~~~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~ 167 (754)
.++++|.++..-|..|. .+.+ ..|..||++.+ +.| ..+......|.+|+.
T Consensus 61 r~r~~L~~i~~Al~ri~----~g~y--g~C~~Cg~~I~--~~R-l~a~P~a~~Ci~Cq~ 110 (112)
T 2kq9_A 61 VGQDELRAIDAALARIA----SGTF--GTCVKCGKRIS--EDR-LKAVPYTPFCQECAA 110 (112)
T ss_dssp HHHHHHHHHHHHHHHHH----HTCC--SEETTTTEECC--HHH-HHHCSCCSSCHHHHH
T ss_pred HHHHHHHHHHHHHHhhh----CCCc--CeeCCCCCccc--HHH-HhcCCCcchhHHHHh
Confidence 33455555555555554 2334 78999999998 333 123445788999974
No 229
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=22.41 E-value=34 Score=29.14 Aligned_cols=33 Identities=27% Similarity=0.671 Sum_probs=26.6
Q ss_pred ccccccccccCCCccccccccCCCCcccccccccccccccccc
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIES 177 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~ 177 (754)
.+.|..|.+.+| |+ .+..|. |....|.+-+...
T Consensus 25 ~~rC~~C~kkvg-------l~--~~f~Cr-Cg~~FC~~HRy~e 57 (85)
T 1wff_A 25 MKHCFLCGKKTG-------LA--TSFECR-CGNNFCASHRYAE 57 (85)
T ss_dssp CCBCSSSCCBCS-------SS--SCEECT-TCCEECTTTCSTG
T ss_pred CccchhhCCeec-------cc--CCeEcC-CCCEecccCCCcc
Confidence 478999999999 44 478896 9999998877654
No 230
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=22.32 E-value=29 Score=41.20 Aligned_cols=35 Identities=14% Similarity=0.444 Sum_probs=27.5
Q ss_pred CccccccccccccccccccccCCCCCCceeeccchhhhhh
Q psy7848 159 CLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETREM 198 (754)
Q Consensus 159 ~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~rel 198 (754)
-..|..|+-++|.-|..... ...|.|.+|...-++
T Consensus 98 pvRC~rCrayiNPf~~f~~~-----g~~w~Cn~C~~~N~~ 132 (770)
T 3efo_B 98 PVRCNRCKAYMCPFMQFIEG-----GRRYQCGFCNCVNDV 132 (770)
T ss_dssp SCBCTTTCCBSCTTCEEEGG-----GTEEECTTTCCEEEC
T ss_pred CCccCCCCCCcCCceEEecC-----CCEEEeccccccCCC
Confidence 36888888888888887663 468999999977654
No 231
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=22.04 E-value=21 Score=32.11 Aligned_cols=21 Identities=19% Similarity=0.529 Sum_probs=15.2
Q ss_pred CCceeeccchhhhhhhhhccccccc
Q psy7848 184 ENIWLCKICAETREMWKKSNAWFFK 208 (754)
Q Consensus 184 ~~~WlC~vC~~~rel~~~sG~Wf~~ 208 (754)
.++|.|.-|.+. ...|+|-++
T Consensus 76 vGIW~C~~Cgk~----fAGGAy~~~ 96 (116)
T 3cc2_Z 76 TGIWQCSYCDYK----FTGGSYKPE 96 (116)
T ss_dssp TTEEEETTTCCE----EECCSSSSS
T ss_pred ceeEECCCCCCE----EECCCcccc
Confidence 357888888764 357788877
No 232
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=21.99 E-value=31 Score=41.24 Aligned_cols=35 Identities=17% Similarity=0.487 Sum_probs=26.6
Q ss_pred CccccccccccccccccccccCCCCCCceeeccchhhhhh
Q psy7848 159 CLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETREM 198 (754)
Q Consensus 159 ~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~rel 198 (754)
-..|..|+-+++.-|..... ...|.|.+|...-++
T Consensus 112 pvRC~~CrayiNPf~~~~~~-----g~~W~C~~C~~~N~~ 146 (810)
T 1pcx_A 112 IVRCRRCRSYMNPFVTFIEQ-----GRRWRCNFCRLANDV 146 (810)
T ss_dssp CCBCTTTCCBCCTTCEEETT-----TTEEECTTTCCEEEC
T ss_pred CCccCCccCEecCceEEeCC-----CCEEEccCCCCcCCC
Confidence 46788888888888877653 568999999876554
No 233
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=21.69 E-value=17 Score=34.69 Aligned_cols=55 Identities=16% Similarity=0.342 Sum_probs=35.2
Q ss_pred ccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhhhhh
Q psy7848 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETREM 198 (754)
Q Consensus 135 ~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~rel 198 (754)
...| .|+++.. -+..-..|..|....-..|-............|.|..|....+.
T Consensus 8 ~~~C-~C~~~~~--------~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~~~ 62 (174)
T 2ri7_A 8 KLYC-ICKTPED--------ESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTEDA 62 (174)
T ss_dssp CEET-TTTEECC--------TTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHHHH
T ss_pred CcEe-eCCCCCC--------CCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchhcc
Confidence 4778 9998853 22335778888877667775433210112458999999987643
No 234
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=21.65 E-value=22 Score=29.44 Aligned_cols=21 Identities=24% Similarity=0.610 Sum_probs=15.4
Q ss_pred CCceeeccchhhhhhhhhccccccc
Q psy7848 184 ENIWLCKICAETREMWKKSNAWFFK 208 (754)
Q Consensus 184 ~~~WlC~vC~~~rel~~~sG~Wf~~ 208 (754)
.++|.|+-|.+. ...|+|-++
T Consensus 43 ~GIW~C~~C~~~----~AGGAy~~~ 63 (73)
T 1ffk_W 43 TSIWVCGHCGYK----IAGGAYTPE 63 (73)
T ss_pred eEEEECCCCCcE----EECCCcccc
Confidence 458888888764 357788877
No 235
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=21.32 E-value=31 Score=40.89 Aligned_cols=35 Identities=17% Similarity=0.451 Sum_probs=26.3
Q ss_pred CccccccccccccccccccccCCCCCCceeeccchhhhhh
Q psy7848 159 CLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETREM 198 (754)
Q Consensus 159 ~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~rel 198 (754)
-..|..|+-++|.-|..... ...|.|.+|...-++
T Consensus 94 pvRC~rCrayiNPf~~f~~~-----g~~w~Cn~C~~~N~~ 128 (766)
T 3eh2_A 94 PLRCNRCKAYMCPFMQFIEG-----GRRFQCCFCSCINDV 128 (766)
T ss_dssp CCBCTTTCCBCCTTCEEEGG-----GTEEECTTTCCEEEC
T ss_pred CCccCCCCCEeCCceEEecC-----CCEEEeccccccCCC
Confidence 36788888888888876552 468999999976553
No 236
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=21.19 E-value=26 Score=29.73 Aligned_cols=21 Identities=19% Similarity=0.529 Sum_probs=13.6
Q ss_pred CCceeeccchhhhhhhhhccccccc
Q psy7848 184 ENIWLCKICAETREMWKKSNAWFFK 208 (754)
Q Consensus 184 ~~~WlC~vC~~~rel~~~sG~Wf~~ 208 (754)
.++|.|.-|... ...|+|-++
T Consensus 43 tGiW~C~~Cg~~----~aggay~~~ 63 (83)
T 1vq8_Z 43 TGIWQCSYCDYK----FTGGSYKPE 63 (83)
T ss_dssp TTEEEETTTCCE----EECCSSSSS
T ss_pred CCeEECCCCCCE----ecCCEeccc
Confidence 456777777663 346777776
No 237
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.10 E-value=39 Score=28.17 Aligned_cols=38 Identities=18% Similarity=0.474 Sum_probs=29.1
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccc
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESV 178 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~ 178 (754)
....|..|++.+- -++..|..|.+|+..+=++|....+
T Consensus 27 ~pt~C~~C~~~lw-------Gl~kqg~~C~~C~~~~Hk~C~~~v~ 64 (83)
T 2yuu_A 27 QPTFCSVCKDFVW-------GLNKQGYKCRQCNAAIHKKCIDKII 64 (83)
T ss_dssp SCCCCSSSCCCCC-------SSSCCEEEETTTCCEECTTGGGTCC
T ss_pred CCcChhhcChhhc-------cccccccccCCcCCeeChhhhhhCC
Confidence 4588999998775 3556789999999776667877664
No 238
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=20.90 E-value=34 Score=40.49 Aligned_cols=34 Identities=18% Similarity=0.569 Sum_probs=26.7
Q ss_pred CccccccccccccccccccccCCCCCCceeeccchhhhhh
Q psy7848 159 CLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETREM 198 (754)
Q Consensus 159 ~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~rel 198 (754)
-..|..|+-++|.-|.. .. ...|.|.+|...-++
T Consensus 85 p~RC~rCrayiNPf~~f-~~-----~~~w~Cn~C~~~N~~ 118 (751)
T 3eh1_A 85 IVRCRSCRTYINPFVSF-ID-----QRRWKCNLCYRVNDV 118 (751)
T ss_dssp CCBCTTTCCBCCTTCEE-SS-----SSEEECTTTCCEEEC
T ss_pred CCcccCccCEeCCceEE-ec-----CCEEEcccccCCCCC
Confidence 37899999999999988 32 368999999866554
No 239
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=20.71 E-value=26 Score=30.84 Aligned_cols=54 Identities=22% Similarity=0.657 Sum_probs=37.5
Q ss_pred cccccccccCCCccccccccCCCCcccc-ccccccccccccccccC-----CCCCCceeeccchhhhh
Q psy7848 136 HACALCGDKFSPIFDRLGLFGAKCLVCH-DCRGGVCQKCGIESVSA-----SKKENIWLCKICAETRE 197 (754)
Q Consensus 136 ~~C~~C~~~~g~~~~~~~~~~~~~~~C~-~C~~~vC~~C~~~~~~~-----~~~~~~WlC~vC~~~re 197 (754)
..|.+|+++.. -...-.+|. .|....=..|-.-+... ..+...|.|..|...++
T Consensus 4 ~~C~iC~~p~~--------~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 4 YPCGACRSEVN--------DDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CBCTTTCSBCC--------TTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred CCCCCCCCccC--------CCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCC
Confidence 67999999976 234477898 88877777776655210 01236899999998654
No 240
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=20.46 E-value=12 Score=29.18 Aligned_cols=49 Identities=18% Similarity=0.423 Sum_probs=31.1
Q ss_pred ccccccccc-cCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchhh
Q psy7848 135 AHACALCGD-KFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAET 195 (754)
Q Consensus 135 ~~~C~~C~~-~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~~ 195 (754)
+..|.+|.. .|.- .....+=..|+|.+|..|-..... .....|.+|.+.
T Consensus 3 ~~~C~IC~~~~~~~--------~~~~~~~~~CgH~fC~~Ci~~~~~----~~~~~CP~Cr~~ 52 (65)
T 1g25_A 3 DQGCPRCKTTKYRN--------PSLKLMVNVCGHTLCESCVDLLFV----RGAGNCPECGTP 52 (65)
T ss_dssp TTCCSTTTTHHHHC--------SSCCEEECTTCCCEEHHHHHHHHH----TTSSSCTTTCCC
T ss_pred CCcCCcCCCCccCC--------CccCeecCCCCCHhHHHHHHHHHH----cCCCcCCCCCCc
Confidence 468999998 5540 000112247999999999876631 234578888754
No 241
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=20.45 E-value=52 Score=26.00 Aligned_cols=38 Identities=21% Similarity=0.506 Sum_probs=29.8
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccc
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESV 178 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~ 178 (754)
....|..|+..+- -++..|..|.+|+..+=++|....+
T Consensus 22 ~pt~C~~C~~~l~-------Gl~~qg~~C~~C~~~~Hk~C~~~v~ 59 (65)
T 2enz_A 22 SPTFCEHCGTLLW-------GLARQGLKCDACGMNVHHRCQTKVA 59 (65)
T ss_dssp SCCBCSSSCCBCC-------CSSSCSEEESSSCCEECTTTTTTSC
T ss_pred CCcCchhcChhhe-------ecCCcccccCCCCCccCHhHHhhCc
Confidence 3488999999875 3567799999999777677877664
No 242
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.42 E-value=17 Score=29.85 Aligned_cols=38 Identities=18% Similarity=0.475 Sum_probs=30.5
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccc
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESV 178 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~ 178 (754)
....|..|+..+- -+...|..|.+|+..+=++|....+
T Consensus 27 ~pt~C~~C~~~lw-------Gl~kqG~~C~~C~~~~Hk~C~~~v~ 64 (74)
T 2db6_A 27 KPKFCDVCARMIV-------LNNKFGLRCKNCKTNIHEHCQSYVE 64 (74)
T ss_dssp SCEECSSSCCEEC-------HHHHEEEEESSSCCEECTTTTGGGS
T ss_pred CCcCchhcChhhc-------cccCCccccCCCCCccChhHHhhCC
Confidence 3488999998776 3556799999999888888987764
No 243
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=20.30 E-value=23 Score=30.71 Aligned_cols=44 Identities=7% Similarity=-0.183 Sum_probs=32.3
Q ss_pred cccccccccccCCCccccccccCCCCccccccccccccccccccccCCCCCCceeeccchh
Q psy7848 134 AAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAE 194 (754)
Q Consensus 134 ~~~~C~~C~~~~g~~~~~~~~~~~~~~~C~~C~~~vC~~C~~~~~~~~~~~~~WlC~vC~~ 194 (754)
.+-.|.+|+..|. --+...|+|..|+.|=...- .....|.+|.+
T Consensus 28 ~~~~CpI~~~~m~------------dPV~~~cGhtf~r~~I~~~l-----~~~~~cP~~~~ 71 (100)
T 2kre_A 28 DEFRDPLMDTLMT------------DPVRLPSGTIMDRSIILRHL-----LNSPTDPFNRQ 71 (100)
T ss_dssp TTTBCTTTCSBCS------------SEEEETTTEEEEHHHHHHHT-----TSCSBCSSSCC
T ss_pred HhhCCcCccCccc------------CCeECCCCCEEchHHHHHHH-----HcCCCCCCCCC
Confidence 4689999999888 44556689999999876664 12356888864
Done!