RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7848
(754 letters)
>d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 138
Score = 117 bits (295), Expect = 1e-31
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 615 GKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHK-RKYKTGVKWK 673
G++ ++LC+ + L V ++K +L D +G SDP++K+ L + K KT VK
Sbjct: 2 GELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKC 61
Query: 674 TLNPIFNEEFAIETKITELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDM 733
T N +FNE F + L + ++ V D + G N+ +G L L ++G HW ++
Sbjct: 62 TPNAVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATAEGSGGGHWKEI 121
Query: 734 MKYPDHKHEGIHNL 747
+P + H L
Sbjct: 122 CDFPRRQIAKWHML 135
Score = 90.9 bits (225), Expect = 3e-22
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 2/131 (1%)
Query: 472 GSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLR 531
G + +++ Y STT +L V + +A+ L D+ G SDP+ K+NL K + +T
Sbjct: 2 GELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKC 61
Query: 532 TINPEFHEKLTFYSVSETDLSLQSLHILVLDDDKYG-HDFLGEARFPLNRLRPHISRDLC 590
T N F+E F + L S+ LVLD ++ ++ +G
Sbjct: 62 TPNAVFNELFVF-DIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATAEGSGGGHWKE 120
Query: 591 LNLCKHYPVPR 601
+ + +
Sbjct: 121 ICDFPRRQIAK 131
>d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 137
Score = 113 bits (283), Expect = 5e-30
Identities = 70/134 (52%), Positives = 99/134 (73%), Gaps = 1/134 (0%)
Query: 615 GKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPD-LHKRKYKTGVKWK 673
GKI ++L +ST++ LIV +I+C +L MD+NG+SDPF+KL+LKPD K K+KT +K K
Sbjct: 2 GKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKK 61
Query: 674 TLNPIFNEEFAIETKITELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDM 733
TLNP FNEEF + K ++L+K++L I+VWD D GKSNDY+G +L ++KG+RL+HW +
Sbjct: 62 TLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYEC 121
Query: 734 MKYPDHKHEGIHNL 747
+K D K E H L
Sbjct: 122 LKNKDKKIERWHQL 135
Score = 82.6 bits (203), Expect = 3e-19
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 472 GSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLR 531
G I +++ Y + L V + R L AMD +G SDPF KL L P + +T+ +
Sbjct: 2 GKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKK 61
Query: 532 TINPEFHEKLTFYSVSETDLSLQSLHILVLDDDKYG-HDFLGEARFPLNRLRPHISRDLC 590
T+NPEF+E+ + + +DL+ +SL I V D D +D++G + ++ +
Sbjct: 62 TLNPEFNEEFFY-DIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYE 120
Query: 591 LNLCKHYPVPR 601
K + R
Sbjct: 121 CLKNKDKKIER 131
>d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 157
Score = 104 bits (261), Expect = 7e-27
Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 615 GKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKY-KTGVKWK 673
G I +L + L V +++ NL MD G SDP++K++L + + K KT +K
Sbjct: 12 GDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKN 71
Query: 674 TLNPIFNEEFAIETKITELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDM 733
TLNP +NE F+ E ++ K +V+TV D D ND +G + + NS G LRHW DM
Sbjct: 72 TLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDM 131
Query: 734 MKYPDHKHEGIHNL 747
+ P H L
Sbjct: 132 LANPRRPIAQWHTL 145
Score = 90.3 bits (223), Expect = 9e-22
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Query: 470 NLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTC 529
LG I ++ Y T L V + AK L+ MD+ G SDP+ K++L+ K + +T
Sbjct: 10 KLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIK 69
Query: 530 LRTINPEFHEKLTFYSVSETDLSLQSLHILVLDDDKYG-HDFLGEARFPLNRLRPHISRD 588
T+NP ++E +F V + + + VLD DK G +D +G+ N +
Sbjct: 70 KNTLNPYYNESFSFE-VPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHW 128
Query: 589 LCLNLCKHYPVPR 601
+ P+ +
Sbjct: 129 SDMLANPRRPIAQ 141
>d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis
protein, rim2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 125
Score = 102 bits (256), Expect = 1e-26
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Query: 472 GSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLR 531
G + + + +D L VT+ AK L + + +P+ K+ +P ++ RTKT +
Sbjct: 1 GQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKK 60
Query: 532 TINPEFHEKLTFYSVSETDLSLQSLHILVLDDDKYG---HDFLGEARFPLNRL 581
T+ P++++ + V + + L I + D + +FLGE L
Sbjct: 61 TLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETA 113
Score = 92.1 bits (228), Expect = 1e-22
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 615 GKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRK-YKTGVKWK 673
G++ + L F LIV ++ +L + +P++K+Y PD + +T K
Sbjct: 1 GQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKK 60
Query: 674 TLNPIFNEEFAIE-TKITELSKQTLVITVWDKDYGK--SNDYLGCLELCCNS-KGDRLRH 729
TL P +N+ F E ++ L IT+WD+ + +++LG + + + D H
Sbjct: 61 TLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDDEPH 120
Query: 730 WVD 732
W
Sbjct: 121 WYK 123
>d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 143
Score = 100 bits (249), Expect = 2e-25
Identities = 44/127 (34%), Positives = 74/127 (58%), Gaps = 3/127 (2%)
Query: 609 EECWQHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKT 668
+E + GK+ +L + + L+V +I+ L +D G SDP++K++L PD K+K++T
Sbjct: 15 KEEEKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPD-KKKKFET 73
Query: 669 GVKWKTLNPIFNEEFAIETKITELSKQTLVITVWDKDYGKSNDYLGCLELCCNS--KGDR 726
V KTLNP+FNE+F + +EL +TLV+ V+D D +D +G ++ N+ G
Sbjct: 74 KVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHV 133
Query: 727 LRHWVDM 733
W D+
Sbjct: 134 TEEWRDL 140
Score = 96.4 bits (239), Expect = 5e-24
Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 465 SQADTNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRL 524
+ + LG ++ ++ YD L V + +A L A+D+ GTSDP+ K+ L+P K
Sbjct: 14 PKEEEKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKF-- 71
Query: 525 RTKTCLRTINPEFHEKLTFYSVSETDLSLQSLHILVLDDDKYG-HDFLGEARFPLNRLRP 583
TK +T+NP F+E+ TF V ++L ++L + V D D++ HD +GE + P+N +
Sbjct: 72 ETKVHRKTLNPVFNEQFTF-KVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDF 130
Query: 584 HISRDLCLNL 593
+ +L
Sbjct: 131 GHVTEEWRDL 140
>d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 145
Score = 96.4 bits (239), Expect = 5e-24
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Query: 615 GKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKP-DLHKRKYKTGVKWK 673
G++ +LC+ L V +IK +NL MD GFSDP++K L +K KT +K
Sbjct: 7 GELNFSLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKN 66
Query: 674 TLNPIFNEEFAIETKITELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDR-LRHWVD 732
TLNP +NE + + L I V D D N+ +G + + HW +
Sbjct: 67 TLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAE 126
Query: 733 MMKYPDHKHEGIHNLS 748
M+ P E H L
Sbjct: 127 MLANPRKPVEHWHQLV 142
Score = 83.3 bits (205), Expect = 2e-19
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 469 TNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKT 528
+LG + ++ Y T L VT+ +A L+AMD+ G SDP+ K +L+ + + +T
Sbjct: 4 ADLGELNFSLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSI 63
Query: 529 CLRTINPEFHEKLTFYSVSETDLSLQSLHILVLDDDKYG-HDFLGEARFPLNRLRPH 584
T+NP ++E L F V+ + L I V+D D G ++ +G R PH
Sbjct: 64 KKNTLNPTYNEALVF-DVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPH 119
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 94.0 bits (233), Expect = 2e-23
Identities = 55/123 (44%), Positives = 78/123 (63%), Gaps = 10/123 (8%)
Query: 86 EPLDPTEQEKIEEVIKRAEALDYIEQERVGRLVERVDNMKRNVTGGAAAAHACALCGDKF 145
E L E+E I VI RAE ++ +EQER+GRLV+R++ M++NV G + C LCG++
Sbjct: 1 EELTDEEKEIINRVIARAEKMETMEQERIGRLVDRLETMRKNVAG--DGVNRCILCGEQL 58
Query: 146 SPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETREMWKKSNAW 205
+ +VC DC+ VC KCG+E+ S ++ +WLCKIC E RE+WK+S AW
Sbjct: 59 GMLGSA-------SVVCEDCKKNVCTKCGVET-SNNRPHPVWLCKICLEQREVWKRSGAW 110
Query: 206 FFK 208
FFK
Sbjct: 111 FFK 113
>d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 132
Score = 90.9 bits (225), Expect = 2e-22
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 615 GKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKP-DLHKRKYKTGVKWK 673
G+I++ + LIV + NL+PMD NG SDP++KL L P + K KT
Sbjct: 4 GRIYIQAHIDREV--LIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKC 61
Query: 674 TLNPIFNEEFAIETKITELSKQTLVITVWDKDYGKSNDYLGCLELCCNS-KGDRLRHWVD 732
+LNP +NE F + K ++ + L + +WD D ND++G L + + + W
Sbjct: 62 SLNPEWNETFRFQLKESDKD-RRLSVEIWDWDLTSRNDFMGSLSFGISELQKAGVDGWFK 120
Query: 733 MMKYPDHKH 741
++ + ++
Sbjct: 121 LLSQEEGEY 129
Score = 85.9 bits (212), Expect = 2e-20
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 472 GSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLR 531
G I + D L V + AK L MD +G SDP+ KL L+P K+ + +TKT
Sbjct: 4 GRIYIQAHIDREV--LIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKC 61
Query: 532 TINPEFHEKLTFYSVSETDLSLQSLHILVLDDDKYG-HDFLGEARFPLNRLRP 583
++NPE++E F + E+D + L + + D D +DF+G F ++ L+
Sbjct: 62 SLNPEWNETFRF-QLKESDKD-RRLSVEIWDWDLTSRNDFMGSLSFGISELQK 112
>d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId:
9606]}
Length = 138
Score = 88.6 bits (219), Expect = 2e-21
Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Query: 465 SQADTNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHG-TSDPFCKLNLVPLTKTSHR 523
S + LG++ ++ Y+ + V + A+GL AMD TSDP+ K+ ++P K H+
Sbjct: 2 SSGSSGLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKK--HK 59
Query: 524 LRTKTCLRTINPEFHEKLTFYSVSETDLSLQSLHILVLDDDKYG-HDFLGEARFPLNRLR 582
++T+ +T++P F E TFY + T + +LH +L D++ D +GE PL+ +
Sbjct: 60 VKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIE 119
Query: 583 P 583
Sbjct: 120 L 120
Score = 79.4 bits (195), Expect = 4e-18
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 613 QHGKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGF-SDPFIKLYLKPDLHKRKYKTGVK 671
G +F +L ++ +++A +VN+ + L MD SDP+IK+ + P+ K K KT V
Sbjct: 7 GLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPE-KKHKVKTRVL 65
Query: 672 WKTLNPIFNEEF-AIETKITELSKQTLVITVWDKDYGKSNDYLGCLELCCNS---KGDRL 727
KTL+P F+E F T++ + L T+ D +D +G + + + ++
Sbjct: 66 RKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKM 125
Query: 728 RHWVDMMKYP 737
+++ P
Sbjct: 126 LMNREIISGP 135
>d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 130
Score = 81.2 bits (199), Expect = 7e-19
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 615 GKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKT 674
G+I L + L+V +++ +L DSNGFSDP++K+YL PD K+K++T V KT
Sbjct: 5 GRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPD-RKKKFQTKVHRKT 63
Query: 675 LNPIFNEEFAIETKITELSKQTLVITVWDKDYGKSNDYLGCLELCCNSK----GDRLRHW 730
LNPIFNE F + EL+++ L +V+D D +D +G + L + W
Sbjct: 64 LNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLW 123
Query: 731 VDMMK 735
D+++
Sbjct: 124 RDILE 128
Score = 70.0 bits (170), Expect = 6e-15
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 471 LGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCL 530
G I + Y + L V + +A L A D +G SDP+ K+ L+P K +TK
Sbjct: 4 CGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKF--QTKVHR 61
Query: 531 RTINPEFHEKLTFYSVSETDLSLQSLHILVLDDDKYG-HDFLGEARFPLNRLRPHISRD 588
+T+NP F+E F SV +L+ + LH V D D++ HD +G+ D
Sbjct: 62 KTLNPIFNETFQF-SVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPD 119
>d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 142
Score = 81.1 bits (199), Expect = 1e-18
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 472 GSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVP---------LTKTSH 522
G I+L + YD L + + +A+ L D +G SDPF K+ L+P +
Sbjct: 7 GEIQLQINYDLGN--LIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEY 64
Query: 523 RLRTKTCLRTINPEFHEKLTFYSVSETDLSLQSLHILVLDDDKYG-HDFLGEARFPLNRL 581
+ RTK +++NPE+++ + + S+S L ++L + V D D++ +DFLGE L+
Sbjct: 65 KRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSST 124
Query: 582 RPHISRDLCLNLCKH 596
+ L +
Sbjct: 125 SHLDNTPRWYPLKEQ 139
Score = 77.6 bits (190), Expect = 2e-17
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 15/132 (11%)
Query: 615 GKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLH----------KR 664
G+I L + + LI+++++ NL+P D+NG+SDPF+K+YL P +
Sbjct: 7 GEIQLQINYDLGN--LIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEY 64
Query: 665 KYKTGVKWKTLNPIFNEEFAIE-TKITELSKQTLVITVWDKDYGKSNDYLG--CLELCCN 721
K +T K+LNP +N+ + + +L K+TL +TVWD D SND+LG ++L
Sbjct: 65 KRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSST 124
Query: 722 SKGDRLRHWVDM 733
S D W +
Sbjct: 125 SHLDNTPRWYPL 136
>d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens)
[TaxId: 9606]}
Length = 138
Score = 75.7 bits (185), Expect = 7e-17
Identities = 22/123 (17%), Positives = 45/123 (36%), Gaps = 5/123 (4%)
Query: 615 GKIFLTLCFSTKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKT 674
K+ L + +K L V ++ + +G D +++ + + +T +K +
Sbjct: 13 PKLHYCLDYDCQKAELFVTRLEAVTS---NHDGGCDCYVQGSVANRTGSVEAQTALKKRQ 69
Query: 675 LNPIFNEEFAIETKITELSKQTLVITVWDKDYGKSNDYLG--CLELCCNSKGDRLRHWVD 732
L+ + E + EL TL +T+ D + G L L S W +
Sbjct: 70 LHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGE 129
Query: 733 MMK 735
+
Sbjct: 130 LKT 132
Score = 66.1 bits (160), Expect = 1e-13
Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 6/135 (4%)
Query: 465 SQADTNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRL 524
S + + + YD L VT A + G D + + ++ S
Sbjct: 6 SGSWNQAPKLHYCLDYDCQKAELFVTRLEAVTS---NHDGGCDCYVQGSVAN-RTGSVEA 61
Query: 525 RTKTCLRTINPEFHEKLTFYSVSETDLSLQSLHILVLDDDKYGHD-FLGEARFPLNRLRP 583
+T R ++ + E L ++E +L +L + + D++ GE R L+
Sbjct: 62 QTALKKRQLHTTWEEGLVLP-LAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSV 120
Query: 584 HISRDLCLNLCKHYP 598
+ L P
Sbjct: 121 PLGAAQWGELKTSGP 135
>d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 126
Score = 67.8 bits (165), Expect = 3e-14
Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 8/110 (7%)
Query: 487 LHVTLHRAKGLR---AMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTF 543
V + RA + D+ T DP+ +L + R RT+ INP ++E
Sbjct: 5 FTVVVLRATKVTKGAFGDMLDTPDPYVELFIST--TPDSRKRTRHFNNDINPVWNE---T 59
Query: 544 YSVSETDLSLQSLHILVLDDDKYGHDFLGEARFPLNRLRPHISRDLCLNL 593
+ L I ++D + + LG A F ++ ++ +++
Sbjct: 60 FEFILDPNQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIF 109
Score = 61.7 bits (149), Expect = 4e-12
Identities = 25/130 (19%), Positives = 53/130 (40%), Gaps = 13/130 (10%)
Query: 630 LIVNLIKCTNLIP---MDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIE 686
V +++ T + D DP+++L++ + +T +NP++NE F
Sbjct: 5 FTVVVLRATKVTKGAFGDMLDTPDPYVELFISTT-PDSRKRTRHFNNDINPVWNETFEFI 63
Query: 687 TKITELSKQTLVITVWDKDYGKSNDYLGCLELCCNS--KGDRLRHWVDMMKYPDHKHEGI 744
+ + L IT+ D +Y ++ LG +S G++ + E +
Sbjct: 64 --LDPNQENVLEITLMDANYVM-DETLGTATFTVSSMKVGEKKEVPFIF----NQVTEMV 116
Query: 745 HNLSIKPLSS 754
+S++ SS
Sbjct: 117 LEMSLEVASS 126
>d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 136
Score = 66.7 bits (162), Expect = 1e-13
Identities = 37/138 (26%), Positives = 51/138 (36%), Gaps = 22/138 (15%)
Query: 487 LHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSV 546
L V L AKGL D DP+ +L + S PE++E F +V
Sbjct: 12 LEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKS----NVAEGMGTTPEWNETFIF-TV 66
Query: 547 SETDLSLQSLHILVLDDDKYG-HDFLGEARFPLNRLRPHISRDLCLNLCKHYPVPREEEV 605
SE L + D D D +GEA PL + S Y V ++EE
Sbjct: 67 SEGT---TELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPP-----TAYNVVKDEEY 118
Query: 606 WGEEECWQHGKIFLTLCF 623
G+I++ L F
Sbjct: 119 --------KGEIWVALSF 128
Score = 61.7 bits (149), Expect = 5e-12
Identities = 24/124 (19%), Positives = 51/124 (41%), Gaps = 11/124 (8%)
Query: 630 LIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKI 689
L V L+ L D DP+++L + + + + P +NE F +
Sbjct: 12 LEVVLVSAKGLEDADFLNNMDPYVQLTCR---TQDQKSNVAEGMGTTPEWNETFIFT--V 66
Query: 690 TELSKQTLVITVWDKDYGKSNDYLGCLELCCNS---KGDRLRHWVDMMKYPDHKHEGIHN 746
+E + L ++DKD G +D +G + +G +++K D +++G
Sbjct: 67 SEGT-TELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVK--DEEYKGEIW 123
Query: 747 LSIK 750
+++
Sbjct: 124 VALS 127
>d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1
(PLC-D1), C-terminal domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 131
Score = 65.2 bits (158), Expect = 3e-13
Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 8/113 (7%)
Query: 626 KKRALIVNLIKCTNL--IPMDSNGFSDPFIKLYLK--PDLHKRKYKTGVKWKTLNPIFNE 681
+ L V +I L + + N DP + + + + + NP ++
Sbjct: 2 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDM 61
Query: 682 EFAIETKITELSKQTLVITVWDKDYGKSNDYLG--CLELCCNSKGDRLRHWVD 732
EF E +T + V D D ND++G + +G R H +
Sbjct: 62 EFEFE--VTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLS 112
Score = 56.7 bits (136), Expect = 3e-10
Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 8/118 (6%)
Query: 487 LHVTLHRAKGLR--AMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTI-NPEFHEKLTF 543
L V + + L + + DP + + + + + +T NP + + F
Sbjct: 6 LRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEF 65
Query: 544 YSVSETDLSLQSLHILVLDDDKYGHD-FLGEARFPLNRLRPHISRDLCLNLCKHYPVP 600
L + +V D D + F+G++ P N L+ R + L P
Sbjct: 66 EVTVPD---LALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGY-RHVHLLSKNGDQHP 119
>d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane
domain-containing protein 2, MCTP2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 126
Score = 61.0 bits (147), Expect = 7e-12
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
Query: 630 LIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFAIETKI 689
L V ++K +L+ D +G SDPF L L + +T +K LNP +N+ F T
Sbjct: 8 LQVKVLKAADLLAADFSGKSDPFCLLELG----NDRLQTHTVYKNLNPEWNKVF---TFP 60
Query: 690 TELSKQTLVITVWDKDYGKSNDYLGCLELCCNSKGDRLRHWVDMMKYPDHKHE 742
+ L +TV+D+D K D+LG + + S D + + +
Sbjct: 61 IKDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAF 113
Score = 60.6 bits (146), Expect = 9e-12
Identities = 36/123 (29%), Positives = 50/123 (40%), Gaps = 15/123 (12%)
Query: 487 LHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSV 546
L V + +A L A D G SDPFC L + RL+T T + +NPE+++ TF
Sbjct: 8 LQVKVLKAADLLAADFSGKSDPFCL-----LELGNDRLQTHTVYKNLNPEWNKVFTF--- 59
Query: 547 SETDLSLQSLHILVLDDDK-YGHDFLGEARFPLNRLRPHISRDLCLNLCKHYPVPREEEV 605
L + V D+D DFLG+ PL +R L E+
Sbjct: 60 -PIKDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLK-----NKDLEQAF 113
Query: 606 WGE 608
G
Sbjct: 114 KGV 116
>d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 122
Score = 52.7 bits (126), Expect = 4e-09
Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 14/110 (12%)
Query: 630 LIVNLIKCTNLIPMDSNGFSDPFIKLYLK--PDLHKRKYKTG--VKWKTLNPIFNEEFAI 685
L + +I L ++++ L P KR+Y+T ++NP++ EE +
Sbjct: 3 LSITVISGQFLSERSV----RTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFV 58
Query: 686 ETKITELSKQTLVITVWDKDYGKSNDYLG--CLELCCNSKGDRLRHWVDM 733
KI +L + V ++ N +LG + + + G
Sbjct: 59 FEKILMPELASLRVAVMEEG----NKFLGHRIIPINALNSGYHHLCLHSE 104
Score = 50.0 bits (119), Expect = 4e-08
Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
Query: 486 SLHVTLHRAKGLRAMDIHGTSDPFCKLNLVPL---TKTSHRLRTKTCLRTINPEFHEKLT 542
+L +T+ + L + + ++ L L K +R + +INP + E+
Sbjct: 2 TLSITVISGQFLSERSV----RTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEE-P 56
Query: 543 FYSVSETDLSLQSLHILVLDDDKYGHDFLGEARFPLNRLRPHISRDLCLNLCKHYPVP 600
F L SL + V+++ + FLG P+N L LCL+ + P+
Sbjct: 57 FVFEKILMPELASLRVAVMEEG---NKFLGHRIIPINALNSGY-HHLCLHSESNMPLT 110
>d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human
(Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 52.8 bits (126), Expect = 6e-09
Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 11/105 (10%)
Query: 487 LHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSV 546
L +T+ AK P+ ++ + +K +T+ C T +P++ + LT
Sbjct: 8 LQITVISAKLKENKKNWFGPSPYVEVTVDGQSK-----KTEKCNNTNSPKWKQPLTVIVT 62
Query: 547 SETDLSLQSLHILVLDDDKYG-HDFLGEARFPLNRLRPHISRDLC 590
+ L + V LG A + + L
Sbjct: 63 PVSKLHFR-----VWSHQTLKSDVLLGTAALDIYETLKSNNMKLE 102
Score = 46.3 bits (109), Expect = 1e-06
Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 8/94 (8%)
Query: 625 TKKRALIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPIFNEEFA 684
T K L + +I + P++++ + K + T +P + +
Sbjct: 3 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTE----KCNNTNSPKWKQPL- 57
Query: 685 IETKITELSKQTLVITVWDKDYGKSNDYLGCLEL 718
+ L VW KS+ LG L
Sbjct: 58 ---TVIVTPVSKLHFRVWSHQTLKSDVLLGTAAL 88
>d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 123
Score = 52.4 bits (125), Expect = 6e-09
Identities = 17/125 (13%), Positives = 38/125 (30%), Gaps = 16/125 (12%)
Query: 630 LIVNLIKCTNLIPMDSNGFSDPFIKLYLKPDLH-KRKYKTGVKWKTLNPIFNEEFAIETK 688
+ N + +L + S PF + +K L R K T+ P + F
Sbjct: 7 ISFNSYELGSLQAE--DDASQPFCAVKMKEALTTDRGKTLVQKKPTMYPEWKSTFDAHIY 64
Query: 689 ITELSKQTLVITVWDKDYGKSNDY---LGCLELCCNSKGDRLRHWVDMMKYPDHKHEGIH 745
+ + I + ++ + L C + W+D+ +
Sbjct: 65 E----GRVIQIVLMRAAEDPMSEVTVGVSVLAERCKKNNGKAEFWLDLQP------QAKV 114
Query: 746 NLSIK 750
+ ++
Sbjct: 115 LMCVQ 119
Score = 45.1 bits (106), Expect = 2e-06
Identities = 15/109 (13%), Positives = 34/109 (31%), Gaps = 9/109 (8%)
Query: 487 LHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSV 546
+ + L+A D S PFC + + T T+ PE+
Sbjct: 7 ISFNSYELGSLQAED--DASQPFCAVKMKEALTTDRGKTLVQKKPTMYPEWKSTFDA--- 61
Query: 547 SETDLSLQSLHILVLDDDKY--GHDFLGEARFPLNRLRPHISRDLCLNL 593
+ + I+++ + +G + + + + L+L
Sbjct: 62 --HIYEGRVIQIVLMRAAEDPMSEVTVGVSVLAERCKKNNGKAEFWLDL 108
>d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 128
Score = 50.5 bits (120), Expect = 3e-08
Identities = 16/96 (16%), Positives = 29/96 (30%), Gaps = 13/96 (13%)
Query: 487 LHVTLHRAKGLRAMDIHGTSDPFCKLNLVPLTKTSHRLRTKTCLRTINPEFHEKLTFYSV 546
L V + +AK A + + + L + + T R P + + F
Sbjct: 4 LCVGVKKAKFDGAQE---KFNTYVT-----LKVQNVKSTTIAV-RGSQPSWEQDFMFEIN 54
Query: 547 SETDLSLQSLHILVLDDDKYGHDFLGEARFPLNRLR 582
L + V + +G PL +R
Sbjct: 55 RLDL----GLTVEVWNKGLIWDTMVGTVWIPLRTIR 86
>d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat
(Rattus rattus) [TaxId: 10117]}
Length = 136
Score = 46.0 bits (108), Expect = 1e-06
Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 37/150 (24%)
Query: 487 LHVTLHRAKGLRAMDIH-----------GTSDPFCKLNLVPLTKTSHRLRTKTCLRTINP 535
L + + A L+ DP+ LN S +T T +T +P
Sbjct: 8 LKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALN----VDDSRIGQTATKQKTNSP 63
Query: 536 EFHEKLTFYSVSETDLSLQSLHILVLDDDKYG-HDFLGEARFPLNRLRPHISRDLCLNLC 594
+H++ + + L V D G DF+ L + SR
Sbjct: 64 AWHDEFVTDVCNGRKIELA-----VFHDAPIGYDDFVANCTIQFEELLQNGSRHF----- 113
Query: 595 KHYPVPREEEVWGEEECWQHGKIFLTLCFS 624
E W + E GK+++ + S
Sbjct: 114 ---------EDWIDLEP--EGKVYVIIDLS 132
Score = 44.9 bits (105), Expect = 4e-06
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 22/121 (18%)
Query: 630 LIVNLIKCTNLIPMD-----------SNGFSDPFIKLYLKPDLHKRKYKTGVKWKTLNPI 678
L + + + +L P DP+I L + + T K KT +P
Sbjct: 8 LKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQ---TATKQKTNSPA 64
Query: 679 FNEEFAIETKITELSKQTLVITVWDKDYGKSNDYLGC----LELCCNSKGDRLRHWVDMM 734
+++EF + + + + V+ +D++ E + W+D+
Sbjct: 65 WHDEFVTDVCNG----RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE 120
Query: 735 K 735
Sbjct: 121 P 121
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein
Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 34.6 bits (79), Expect = 0.003
Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 13/61 (21%)
Query: 137 ACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETR 196
+C CG F+ + C DC+ C C S+ LC +C R
Sbjct: 2 SCKSCGAHFANTARKQT--------CLDCKKNFCMTC-----SSQVGNGPRLCLLCQRFR 48
Query: 197 E 197
Sbjct: 49 A 49
>d1pbya1 a.3.1.7 (A:1-85) Quinohemoprotein amine dehydrogenase A
chain, domains 1 and 2 {Paracoccus denitrificans [TaxId:
266]}
Length = 85
Score = 31.1 bits (70), Expect = 0.099
Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 29/109 (26%)
Query: 154 LFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETREMWKKSNAWFFKVSGLP 213
+ C CH + E + A++K T E W + + G+
Sbjct: 6 VLQNACAACH----VQHEDGRWERIDAARK-----------TPEGWDMTVTRMMRNHGVA 50
Query: 214 YECLDHYTTEAVSGLPYECLDHYTTEAGLPKYTIPKKTQPEKLAFNRRP 262
L+ A+ + H + GL +T+ + R P
Sbjct: 51 ---LEPEERAAI-------VRHLSDTRGLS----LAETEERRYILEREP 85
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 67
Score = 30.0 bits (67), Expect = 0.16
Identities = 17/66 (25%), Positives = 24/66 (36%), Gaps = 11/66 (16%)
Query: 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASK---KENIWLCKI 191
+ AC +C KFS + C C G CQ+ S+ E + +C
Sbjct: 5 SDACMICSKKFS--------LLNRKHHCRSCGGVFCQEHSSNSIPLPDLGIYEPVRVCDS 56
Query: 192 CAETRE 197
C E E
Sbjct: 57 CFEDYE 62
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 88
Score = 30.2 bits (67), Expect = 0.18
Identities = 11/69 (15%), Positives = 21/69 (30%), Gaps = 10/69 (14%)
Query: 138 CALCGDKFSPIFDRLGLFGAKCLVCHDCRGG---VCQKCGIESVSASKKENIWLCKICAE 194
C +C ++L + C +C C K + + +W C C
Sbjct: 19 CVVCRQMTVASGNQL-------VECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTR 71
Query: 195 TREMWKKSN 203
+ + N
Sbjct: 72 QMKRMAQKN 80
>d1twfb_ e.29.1.1 (B:) RBP2 {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 1207
Score = 32.6 bits (73), Expect = 0.23
Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 9/48 (18%)
Query: 169 VCQKCGIESVSASKKENIWLCKICAETREMWKKSNAWFFKVSGLPYEC 216
+C CG+ +V A N + CK C ++++ +PY
Sbjct: 1145 ICGICGLMTVIAKLNHNQFECKGCDNKIDIYQ---------IHIPYAA 1183
>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 88
Score = 29.7 bits (66), Expect = 0.27
Identities = 17/78 (21%), Positives = 23/78 (29%), Gaps = 10/78 (12%)
Query: 129 TGGAAAAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKEN--I 186
+G + C C KF+ K C +C C C S + N
Sbjct: 3 SGSSGMESRCYGCAVKFT--------LFKKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQ 54
Query: 187 WLCKICAETREMWKKSNA 204
+CK C NA
Sbjct: 55 KVCKQCHTILTRGSSDNA 72
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 64
Score = 28.9 bits (64), Expect = 0.28
Identities = 13/66 (19%), Positives = 21/66 (31%), Gaps = 9/66 (13%)
Query: 133 AAAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSA-SKKENIWLCKI 191
C CG FS + C C C +C ++ S K+ + +C
Sbjct: 6 NEVQNCMACGKGFSVTV--------RRHHCRQCGNIFCAECSAKNALTPSSKKPVRVCDA 57
Query: 192 CAETRE 197
C +
Sbjct: 58 CFNDLQ 63
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 64
Score = 28.8 bits (64), Expect = 0.34
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 8/67 (11%)
Query: 130 GGAAAAHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLC 189
G + ++ C CG+ ++ + C C KC + + ++ + C
Sbjct: 1 GSSGSSGQCGACGESYAA--------DEFWICCDLCEMWFHGKCVKITPARAEHIKQYKC 52
Query: 190 KICAETR 196
C+
Sbjct: 53 PSCSNKS 59
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId:
9606]}
Length = 61
Score = 26.8 bits (59), Expect = 1.7
Identities = 12/55 (21%), Positives = 15/55 (27%), Gaps = 13/55 (23%)
Query: 138 CALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKIC 192
C +C D G + L C C C + WLC C
Sbjct: 12 CRVCKD------------GGELLCCDTCPSSYHIHCLNPPLPEIPNGE-WLCPRC 53
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 70
Score = 26.9 bits (59), Expect = 1.9
Identities = 9/55 (16%), Positives = 17/55 (30%), Gaps = 13/55 (23%)
Query: 138 CALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKCGIESVSASKKENIWLCKIC 192
C +C ++C+ C C + ++ E W C +C
Sbjct: 10 CRVCQK------------PGDLVMCNQCEFCFHLDCHLPALQDVPGEE-WSCSLC 51
>d2zjrp1 d.55.1.1 (P:8-134) Ribosomal protein L22 {Deinococcus
radiodurans [TaxId: 1299]}
Length = 127
Score = 27.8 bits (62), Expect = 2.1
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 5 KKKKKKKKKKKKKKIVIAIDKIYRFKAEK 33
+ KK++K++ K +K A+ K R K
Sbjct: 2 RNKKQRKQQVKLRKPGFAVAKYVRMSPRK 30
>d1d7qa_ b.40.4.5 (A:) Translation initiation factor-1a, eIF1a
{Human (Homo sapiens) [TaxId: 9606]}
Length = 143
Score = 27.9 bits (62), Expect = 2.8
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 4 KKKKKKKKKKKKKKKIVIAIDKIYRFKAEKE 34
K K K K +++ K + + FK + +
Sbjct: 2 KNKGKGGKNRRRGKNENESEKRELVFKEDGQ 32
>d1ulib_ d.17.4.4 (B:) Biphenyl dioxygenase small subunit BphA2
{Rhodococcus sp. (strain RHA1) [TaxId: 101510]}
Length = 177
Score = 28.3 bits (62), Expect = 2.8
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Query: 84 KPEPLDPTEQEKIEEVIKR-AEALD 107
KP P+DP+ Q +IE+ A+ L+
Sbjct: 4 KPAPVDPSLQHEIEQFYYWEAKLLN 28
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 72
Score = 26.5 bits (58), Expect = 2.9
Identities = 8/39 (20%), Positives = 13/39 (33%), Gaps = 8/39 (20%)
Query: 135 AHACALCGDKFSPIFDRLGLFGAKCLVCHDCRGGVCQKC 173
C C +F+ F + C +C C +C
Sbjct: 13 GRVCHRCRVEFT--------FTNRKHHCRNCGQVFCGQC 43
>d1zbfa1 c.55.3.1 (A:62-193) BH0863-like Ribonuclease H {Bacillus
halodurans [TaxId: 86665]}
Length = 132
Score = 27.6 bits (61), Expect = 3.0
Identities = 6/29 (20%), Positives = 13/29 (44%)
Query: 1 MKKKKKKKKKKKKKKKKKIVIAIDKIYRF 29
+K KK K + ++ I +D+ +
Sbjct: 79 VKDKKAKSTLVRNEETALIWKLVDEAEEW 107
>d1b04a_ d.142.2.2 (A:) Adenylation domain of NAD+-dependent DNA
ligase {Bacillus stearothermophilus [TaxId: 1422]}
Length = 312
Score = 27.6 bits (60), Expect = 6.2
Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 5/117 (4%)
Query: 104 EALDYIEQERVGRLVERVDNMKRNVTGGAAAAH-----ACALCGDKFSPIFDRLGLFGAK 158
+L+ + + + N +R G A+ A +L R
Sbjct: 161 VSLEARGEAFMPKASFLRLNEERKARGEELFANPRNAAAGSLRQLDPKVAASRQLDLFVY 220
Query: 159 CLVCHDCRGGVCQKCGIESVSASKKENIWLCKICAETREMWKKSNAWFFKVSGLPYE 215
L + G ++ + A + + CA E+ + W K LPYE
Sbjct: 221 GLADAEALGIASHSEALDYLQALGFKVNPERRRCANIDEVIAFVSEWHDKRPQLPYE 277
>d2rmca_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Mouse (Mus
musculus), variant C [TaxId: 10090]}
Length = 182
Score = 27.1 bits (59), Expect = 6.6
Identities = 11/55 (20%), Positives = 23/55 (41%)
Query: 451 KRGVITEEKEYFVTSQADTNLGSIELTVTYDSTTCSLHVTLHRAKGLRAMDIHGT 505
KRG +K +F D ++G I + + + ++ + A G + G+
Sbjct: 1 KRGPSVTDKVFFDVRIGDKDVGRIVIGLFGNVVPKTVENFVALATGEKGYGYKGS 55
>d1lwma_ a.21.1.1 (A:) NHP6a {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 93
Score = 25.6 bits (56), Expect = 7.3
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 1 MKKKKKKKKKKKKKKK 16
M ++ KK+ +KKK
Sbjct: 1 MVTPREPKKRTTRKKK 16
>d2z3ga1 c.97.1.1 (A:2-124) Blasticidin-S deaminase {Aspergillus
terreus [TaxId: 33178]}
Length = 123
Score = 26.4 bits (58), Expect = 7.3
Identities = 18/92 (19%), Positives = 26/92 (28%), Gaps = 7/92 (7%)
Query: 87 PLDPTEQEKIEEVIKRAEALDYIEQERVGRLVERVDNMKRNVTG---GAAAAHACALCGD 143
PL E IE ++ E V D R TG CA
Sbjct: 1 PLSQEESTLIERATATINSIPISEDYSVASAALSSDG--RIFTGVNVYHFTGGPCAELVV 58
Query: 144 KFSPIFDRLGLFGAKCLVCHDCRGGV--CQKC 173
+ G + ++ RG + C +C
Sbjct: 59 LGTAAAAAAGNLTCIVAIGNENRGILSPCGRC 90
>d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon AmiR
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 189
Score = 26.5 bits (57), Expect = 9.0
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 545 SVSETDLSLQSLHILVLDDD 564
S + SL+ L +LVL+
Sbjct: 1 SANSLLGSLRELQVLVLNPP 20
>d1gyta1 c.50.1.1 (A:1-178) Leucine aminopeptidase (Aminopeptidase
A), N-terminal domain {Escherichia coli, PepA [TaxId:
562]}
Length = 178
Score = 26.4 bits (57), Expect = 9.5
Identities = 6/35 (17%), Positives = 15/35 (42%)
Query: 4 KKKKKKKKKKKKKKKIVIAIDKIYRFKAEKEPIQE 38
+ K K + ++ +K+V + + + IQ
Sbjct: 142 QLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQH 176
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.132 0.397
Gapped
Lambda K H
0.267 0.0568 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,802,598
Number of extensions: 136702
Number of successful extensions: 837
Number of sequences better than 10.0: 1
Number of HSP's gapped: 741
Number of HSP's successfully gapped: 83
Length of query: 754
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 662
Effective length of database: 1,144,436
Effective search space: 757616632
Effective search space used: 757616632
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (25.7 bits)