BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7859
(455 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P58281|OPA1_MOUSE Dynamin-like 120 kDa protein, mitochondrial OS=Mus musculus GN=Opa1
PE=1 SV=1
Length = 960
Score = 254 bits (648), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 146/180 (81%), Gaps = 1/180 (0%)
Query: 185 SSQVTTRNLSFAVSECFWKMVRETVEQQADAFKATRFNLETEWKNSFPRIRELDRDELFE 244
+ QVTTRNLS AVS+CFWKMVRE+VEQQAD+FKATRFNLETEWKN++PR+RELDR+ELFE
Sbjct: 536 AHQVTTRNLSLAVSDCFWKMVRESVEQQADSFKATRFNLETEWKNNYPRLRELDRNELFE 595
Query: 245 KARGEILDEIVNLSQVSVQHWEEVLLTQLWNKVSNYVFETIYLPAAQSGNTNAFNTQMDI 304
KA+ EILDE+++LSQV+ +HWEE+L LW +VS +V E IYLPAAQ+ N+ FNT +DI
Sbjct: 596 KAKNEILDEVISLSQVTPKHWEEILQQSLWERVSTHVIENIYLPAAQTMNSGTFNTTVDI 655
Query: 305 KLRQWADQQLPLQSIEAGWEVLKAEFVNFFEKEKNSKDHDGIFDNLKAAVIEEALRRHSW 364
KL+QW D+QLP +++E WE L+ EF F E K+HD IFD LK AV EE+++RH W
Sbjct: 656 KLKQWTDKQLPNKAVEVAWETLQEEFSRFM-TEPKGKEHDDIFDKLKEAVKEESIKRHKW 714
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 115/210 (54%), Gaps = 33/210 (15%)
Query: 1 MDIKLRQWADQQLPLQSIEAGWEVLKAEFVNFFEKEKNSKDHDGIFDNLKAAVIEEALRR 60
+DIKL+QW D+QLP +++E WE L+ EF F E K+HD IFD LK AV EE+++R
Sbjct: 653 VDIKLKQWTDKQLPNKAVEVAWETLQEEFSRFM-TEPKGKEHDDIFDKLKEAVKEESIKR 711
Query: 61 HSWEHKGSEMLRILQLNTLEDQCVS--------------------------------PSL 88
H W + LR++Q N LED+ +S P
Sbjct: 712 HKWNDFAEDSLRVIQHNALEDRSISDKQQWDAAIYFMEEALQGRLKDTENAIENMIGPDW 771
Query: 89 SERWMYWKYSTEEQVKRSYVKSELDKVLQSDTHHKPVLSPDELTTIRKNLQRSNIDCDAD 148
+RWMYWK T+EQ + K+EL+K+L+ + H L+ DE+TT+RKNL+ ++ D
Sbjct: 772 KKRWMYWKNRTQEQCVHNETKNELEKMLKVNDEHPAYLASDEITTVRKNLESRGVEVDPS 831
Query: 149 YIKDCWDPVYRHHFLIQSLAKALDCKKGFY 178
IKD W VYR HFL +L C++GFY
Sbjct: 832 LIKDTWHQVYRRHFLKTALNHCNLCRRGFY 861
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 76/88 (86%)
Query: 368 DCCDVVLFWRIQQMLKVTSNALRQQIMNREARRLDKEIKEVLEDYSQDQEKKMILLTGRR 427
+C DVVLFWRIQ+ML +T+N LRQQ+ N E RRL+K +KEVLED+++D EKK+ LLTG+R
Sbjct: 873 ECNDVVLFWRIQRMLAITANTLRQQLTNTEVRRLEKNVKEVLEDFAEDGEKKVKLLTGKR 932
Query: 428 VTLAEELKRVKQIQEKLEEFIKALNTEK 455
V LAE+LK+V++IQEKL+ FI+AL+ EK
Sbjct: 933 VQLAEDLKKVREIQEKLDAFIEALHQEK 960
>sp|Q5F499|OPA1_CHICK Dynamin-like 120 kDa protein, mitochondrial OS=Gallus gallus
GN=OPA1 PE=2 SV=1
Length = 977
Score = 254 bits (648), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 149/183 (81%), Gaps = 1/183 (0%)
Query: 185 SSQVTTRNLSFAVSECFWKMVRETVEQQADAFKATRFNLETEWKNSFPRIRELDRDELFE 244
+ QVTT+NLS AVS+CFWKMVRE+VEQQADAFKATRFNLETEWKN++PR+RELDR+ELFE
Sbjct: 553 AHQVTTKNLSLAVSDCFWKMVRESVEQQADAFKATRFNLETEWKNNYPRLRELDRNELFE 612
Query: 245 KARGEILDEIVNLSQVSVQHWEEVLLTQLWNKVSNYVFETIYLPAAQSGNTNAFNTQMDI 304
KA+ EILDE+++L+QV+ +HWEE+L LW +VS +V E IYLPAAQ+ N+ FNT +DI
Sbjct: 613 KAKNEILDEVISLTQVTPKHWEEILQKTLWERVSTHVIENIYLPAAQTMNSGTFNTTVDI 672
Query: 305 KLRQWADQQLPLQSIEAGWEVLKAEFVNFFEKEKNSKDHDGIFDNLKAAVIEEALRRHSW 364
KL+QW D+QLP +++E WE L+ EF F ++K K+HD IFD LK AV EE+++RH W
Sbjct: 673 KLKQWTDKQLPNKAVEVAWETLQEEFSRFMTEQK-GKEHDDIFDKLKQAVKEESIKRHKW 731
Query: 365 EHK 367
+
Sbjct: 732 NER 734
Score = 151 bits (382), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 117/210 (55%), Gaps = 33/210 (15%)
Query: 1 MDIKLRQWADQQLPLQSIEAGWEVLKAEFVNFFEKEKNSKDHDGIFDNLKAAVIEEALRR 60
+DIKL+QW D+QLP +++E WE L+ EF F ++K K+HD IFD LK AV EE+++R
Sbjct: 670 VDIKLKQWTDKQLPNKAVEVAWETLQEEFSRFMTEQK-GKEHDDIFDKLKQAVKEESIKR 728
Query: 61 HSWEHKGSEMLRILQLNTLEDQCVS--------------------------------PSL 88
H W + + LR++Q N LED+ +S P
Sbjct: 729 HKWNERAEDSLRVIQHNALEDRSISDKQQWDAAIHFMEETLQSRLKDTESVIEDMVGPDW 788
Query: 89 SERWMYWKYSTEEQVKRSYVKSELDKVLQSDTHHKPVLSPDELTTIRKNLQRSNIDCDAD 148
+RW+YW T+EQ R+ K+EL+K+++ + H L+ DE+TT+RKNL+ I D
Sbjct: 789 KKRWLYWISRTKEQNIRNETKNELEKLIKCNEEHAAYLANDEVTTVRKNLEARGITVDPC 848
Query: 149 YIKDCWDPVYRHHFLIQSLAKALDCKKGFY 178
IKD W +YR +FL +L C++GFY
Sbjct: 849 LIKDTWHQIYRRYFLKTALNHCNLCRRGFY 878
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 76/88 (86%)
Query: 368 DCCDVVLFWRIQQMLKVTSNALRQQIMNREARRLDKEIKEVLEDYSQDQEKKMILLTGRR 427
+C D+VLFWRIQ+ML +T+N LRQQ+ N E RRL+K +KEVLED+++D EKK+ LLTG+R
Sbjct: 890 ECNDIVLFWRIQRMLAITANTLRQQLTNTEVRRLEKNVKEVLEDFAEDNEKKVKLLTGKR 949
Query: 428 VTLAEELKRVKQIQEKLEEFIKALNTEK 455
V LAE+LK+V++IQEKLE FI+AL+ EK
Sbjct: 950 VQLAEDLKKVREIQEKLEAFIEALHQEK 977
>sp|O60313|OPA1_HUMAN Dynamin-like 120 kDa protein, mitochondrial OS=Homo sapiens GN=OPA1
PE=1 SV=3
Length = 960
Score = 253 bits (647), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 146/180 (81%), Gaps = 1/180 (0%)
Query: 185 SSQVTTRNLSFAVSECFWKMVRETVEQQADAFKATRFNLETEWKNSFPRIRELDRDELFE 244
+ QVTTRNLS AVS+CFWKMVRE+VEQQAD+FKATRFNLETEWKN++PR+RELDR+ELFE
Sbjct: 536 AHQVTTRNLSLAVSDCFWKMVRESVEQQADSFKATRFNLETEWKNNYPRLRELDRNELFE 595
Query: 245 KARGEILDEIVNLSQVSVQHWEEVLLTQLWNKVSNYVFETIYLPAAQSGNTNAFNTQMDI 304
KA+ EILDE+++LSQV+ +HWEE+L LW +VS +V E IYLPAAQ+ N+ FNT +DI
Sbjct: 596 KAKNEILDEVISLSQVTPKHWEEILQQSLWERVSTHVIENIYLPAAQTMNSGTFNTTVDI 655
Query: 305 KLRQWADQQLPLQSIEAGWEVLKAEFVNFFEKEKNSKDHDGIFDNLKAAVIEEALRRHSW 364
KL+QW D+QLP +++E WE L+ EF F E K+HD IFD LK AV EE+++RH W
Sbjct: 656 KLKQWTDKQLPNKAVEVAWETLQEEFSRFM-TEPKGKEHDDIFDKLKEAVKEESIKRHKW 714
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 115/210 (54%), Gaps = 33/210 (15%)
Query: 1 MDIKLRQWADQQLPLQSIEAGWEVLKAEFVNFFEKEKNSKDHDGIFDNLKAAVIEEALRR 60
+DIKL+QW D+QLP +++E WE L+ EF F E K+HD IFD LK AV EE+++R
Sbjct: 653 VDIKLKQWTDKQLPNKAVEVAWETLQEEFSRFM-TEPKGKEHDDIFDKLKEAVKEESIKR 711
Query: 61 HSWEHKGSEMLRILQLNTLEDQCVS--------------------------------PSL 88
H W + LR++Q N LED+ +S P
Sbjct: 712 HKWNDFAEDSLRVIQHNALEDRSISDKQQWDAAIYFMEEALQARLKDTENAIENMVGPDW 771
Query: 89 SERWMYWKYSTEEQVKRSYVKSELDKVLQSDTHHKPVLSPDELTTIRKNLQRSNIDCDAD 148
+RW+YWK T+EQ + K+EL+K+L+ + H L+ DE+TT+RKNL+ ++ D
Sbjct: 772 KKRWLYWKNRTQEQCVHNETKNELEKMLKCNEEHPAYLASDEITTVRKNLESRGVEVDPS 831
Query: 149 YIKDCWDPVYRHHFLIQSLAKALDCKKGFY 178
IKD W VYR HFL +L C++GFY
Sbjct: 832 LIKDTWHQVYRRHFLKTALNHCNLCRRGFY 861
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 76/88 (86%)
Query: 368 DCCDVVLFWRIQQMLKVTSNALRQQIMNREARRLDKEIKEVLEDYSQDQEKKMILLTGRR 427
+C DVVLFWRIQ+ML +T+N LRQQ+ N E RRL+K +KEVLED+++D EKK+ LLTG+R
Sbjct: 873 ECNDVVLFWRIQRMLAITANTLRQQLTNTEVRRLEKNVKEVLEDFAEDGEKKIKLLTGKR 932
Query: 428 VTLAEELKRVKQIQEKLEEFIKALNTEK 455
V LAE+LK+V++IQEKL+ FI+AL+ EK
Sbjct: 933 VQLAEDLKKVREIQEKLDAFIEALHQEK 960
>sp|Q2TA68|OPA1_RAT Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus
GN=Opa1 PE=1 SV=1
Length = 960
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 146/180 (81%), Gaps = 1/180 (0%)
Query: 185 SSQVTTRNLSFAVSECFWKMVRETVEQQADAFKATRFNLETEWKNSFPRIRELDRDELFE 244
+ QVTTRNLS AVS+CFWKMVRE+VEQQAD+FKATRFNLETEWKN++PR+RELDR+ELFE
Sbjct: 536 AHQVTTRNLSLAVSDCFWKMVRESVEQQADSFKATRFNLETEWKNNYPRLRELDRNELFE 595
Query: 245 KARGEILDEIVNLSQVSVQHWEEVLLTQLWNKVSNYVFETIYLPAAQSGNTNAFNTQMDI 304
KA+ EILDE+++LSQV+ +HWEE+L LW +VS +V E IYLPAAQ+ N+ FNT +DI
Sbjct: 596 KAKNEILDEVISLSQVTPKHWEEILQQSLWERVSTHVIENIYLPAAQTMNSGTFNTTVDI 655
Query: 305 KLRQWADQQLPLQSIEAGWEVLKAEFVNFFEKEKNSKDHDGIFDNLKAAVIEEALRRHSW 364
KL+QW D+QLP +++E WE L+ EF F E K+HD IFD LK AV EE+++RH W
Sbjct: 656 KLKQWTDKQLPNKAVEVAWETLQDEFSRFM-TEPKGKEHDDIFDKLKEAVKEESIKRHKW 714
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 115/210 (54%), Gaps = 33/210 (15%)
Query: 1 MDIKLRQWADQQLPLQSIEAGWEVLKAEFVNFFEKEKNSKDHDGIFDNLKAAVIEEALRR 60
+DIKL+QW D+QLP +++E WE L+ EF F E K+HD IFD LK AV EE+++R
Sbjct: 653 VDIKLKQWTDKQLPNKAVEVAWETLQDEFSRFM-TEPKGKEHDDIFDKLKEAVKEESIKR 711
Query: 61 HSWEHKGSEMLRILQLNTLEDQCVS--------------------------------PSL 88
H W + LR++Q N LED+ +S P
Sbjct: 712 HKWNDFAEDSLRVIQHNALEDRSISDKQQWDAAIYFMEEALQGRLKDTENAIENMIGPDW 771
Query: 89 SERWMYWKYSTEEQVKRSYVKSELDKVLQSDTHHKPVLSPDELTTIRKNLQRSNIDCDAD 148
+RW+YWK T+EQ + K+EL+K+L+ + H L+ DE+TT+RKNL+ ++ D
Sbjct: 772 KKRWIYWKNRTQEQCVHNETKNELEKMLKVNDEHPAYLASDEITTVRKNLESRGVEVDPS 831
Query: 149 YIKDCWDPVYRHHFLIQSLAKALDCKKGFY 178
IKD W VYR HFL +L C++GFY
Sbjct: 832 LIKDTWHQVYRRHFLKTALNHCNLCRRGFY 861
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 76/88 (86%)
Query: 368 DCCDVVLFWRIQQMLKVTSNALRQQIMNREARRLDKEIKEVLEDYSQDQEKKMILLTGRR 427
+C DVVLFWRIQ+ML +T+N LRQQ+ N E RRL+K +KEVLED+++D EKK+ LLTG+R
Sbjct: 873 ECNDVVLFWRIQRMLAITANTLRQQLTNTEVRRLEKNVKEVLEDFAEDGEKKVKLLTGKR 932
Query: 428 VTLAEELKRVKQIQEKLEEFIKALNTEK 455
V LAE+LK+V++IQEKL+ FI+AL+ EK
Sbjct: 933 VQLAEDLKKVREIQEKLDAFIEALHQEK 960
>sp|Q5RAM3|OPA1_PONAB Dynamin-like 120 kDa protein, mitochondrial OS=Pongo abelii GN=OPA1
PE=2 SV=1
Length = 960
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 115/180 (63%), Positives = 145/180 (80%), Gaps = 1/180 (0%)
Query: 185 SSQVTTRNLSFAVSECFWKMVRETVEQQADAFKATRFNLETEWKNSFPRIRELDRDELFE 244
+ QVTTRNLS AVS+CFWKMVRE+VEQQAD+FKATRFNLETEWKN++PR+RELDR+ELFE
Sbjct: 536 AHQVTTRNLSLAVSDCFWKMVRESVEQQADSFKATRFNLETEWKNNYPRLRELDRNELFE 595
Query: 245 KARGEILDEIVNLSQVSVQHWEEVLLTQLWNKVSNYVFETIYLPAAQSGNTNAFNTQMDI 304
KA+ EILDE+++LSQ + +HWEE+L LW +VS +V E IYLPAAQ+ N+ FNT +DI
Sbjct: 596 KAKNEILDEVISLSQATPKHWEEILQQSLWERVSTHVIENIYLPAAQTMNSGTFNTTVDI 655
Query: 305 KLRQWADQQLPLQSIEAGWEVLKAEFVNFFEKEKNSKDHDGIFDNLKAAVIEEALRRHSW 364
KL+QW D+QLP +++E WE L+ EF F E K+HD IFD LK AV EE+++RH W
Sbjct: 656 KLKQWTDKQLPNKAVEVAWETLQGEFSRFM-TEPKGKEHDDIFDKLKEAVKEESIKRHKW 714
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 115/210 (54%), Gaps = 33/210 (15%)
Query: 1 MDIKLRQWADQQLPLQSIEAGWEVLKAEFVNFFEKEKNSKDHDGIFDNLKAAVIEEALRR 60
+DIKL+QW D+QLP +++E WE L+ EF F E K+HD IFD LK AV EE+++R
Sbjct: 653 VDIKLKQWTDKQLPNKAVEVAWETLQGEFSRFM-TEPKGKEHDDIFDKLKEAVKEESIKR 711
Query: 61 HSWEHKGSEMLRILQLNTLEDQCVS--------------------------------PSL 88
H W + LR++Q N LED+ +S P
Sbjct: 712 HKWNDFAEDSLRVIQHNALEDRSISDKQQWDAAIYFMEEALQARLKDTENAIENMVGPDW 771
Query: 89 SERWMYWKYSTEEQVKRSYVKSELDKVLQSDTHHKPVLSPDELTTIRKNLQRSNIDCDAD 148
+RW+YWK T+EQ + K+EL+K+L+ + H L+ DE+TT+RKNL+ ++ D
Sbjct: 772 KKRWLYWKNRTQEQCVHNETKNELEKMLKCNEEHPAYLASDEITTVRKNLESRGVEVDPS 831
Query: 149 YIKDCWDPVYRHHFLIQSLAKALDCKKGFY 178
IKD W VYR HFL +L C++GFY
Sbjct: 832 LIKDTWHQVYRRHFLKTALNHCNLCRRGFY 861
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 76/88 (86%)
Query: 368 DCCDVVLFWRIQQMLKVTSNALRQQIMNREARRLDKEIKEVLEDYSQDQEKKMILLTGRR 427
+C DVVLFWRIQ+ML +T+N LRQQ+ N E RRL+K +KEVLED+++D EKK+ LLTG+R
Sbjct: 873 ECNDVVLFWRIQRMLAITANTLRQQLTNTEVRRLEKNVKEVLEDFAEDGEKKIKLLTGKR 932
Query: 428 VTLAEELKRVKQIQEKLEEFIKALNTEK 455
V LAE+LK+V++IQEKL+ FI+AL+ EK
Sbjct: 933 VQLAEDLKKVREIQEKLDAFIEALHQEK 960
>sp|Q5U3A7|OPA1_DANRE Dynamin-like 120 kDa protein, mitochondrial OS=Danio rerio GN=opa1
PE=2 SV=1
Length = 966
Score = 251 bits (642), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 114/188 (60%), Positives = 149/188 (79%), Gaps = 1/188 (0%)
Query: 180 DGVTLSSQVTTRNLSFAVSECFWKMVRETVEQQADAFKATRFNLETEWKNSFPRIRELDR 239
DG+ + QVTT+NLS AVS+CFWKMVRE+VEQQADAFKA+RFNLETEWKN++PR+RELDR
Sbjct: 537 DGMLKAHQVTTKNLSLAVSDCFWKMVRESVEQQADAFKASRFNLETEWKNNYPRLRELDR 596
Query: 240 DELFEKARGEILDEIVNLSQVSVQHWEEVLLTQLWNKVSNYVFETIYLPAAQSGNTNAFN 299
+EL+EKA+ EILDE+++LSQV+ +HWE +L +LW +VS +V E IYLPAAQ+ N+ FN
Sbjct: 597 NELYEKAKNEILDEVISLSQVTPKHWESILQKKLWERVSTHVIENIYLPAAQTMNSGTFN 656
Query: 300 TQMDIKLRQWADQQLPLQSIEAGWEVLKAEFVNFFEKEKNSKDHDGIFDNLKAAVIEEAL 359
T +DIKL+QW D+QLP +++E WE L+ EF F E KD D IFD LK AV +E++
Sbjct: 657 TTVDIKLKQWTDKQLPHKALEVAWETLQEEFARFM-AEYKGKDQDDIFDKLKEAVKDESI 715
Query: 360 RRHSWEHK 367
+RH W +
Sbjct: 716 KRHKWNER 723
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 113/210 (53%), Gaps = 33/210 (15%)
Query: 1 MDIKLRQWADQQLPLQSIEAGWEVLKAEFVNFFEKEKNSKDHDGIFDNLKAAVIEEALRR 60
+DIKL+QW D+QLP +++E WE L+ EF F E KD D IFD LK AV +E+++R
Sbjct: 659 VDIKLKQWTDKQLPHKALEVAWETLQEEFARFM-AEYKGKDQDDIFDKLKEAVKDESIKR 717
Query: 61 HSWEHKGSEMLRILQLNTLEDQC--------------------------------VSPSL 88
H W + + LR++Q N LED+ V P
Sbjct: 718 HKWNERAMDSLRVIQHNALEDRSITDKPQWDAAIQFMEETLQSRLKDTESVIADMVGPDW 777
Query: 89 SERWMYWKYSTEEQVKRSYVKSELDKVLQSDTHHKPVLSPDELTTIRKNLQRSNIDCDAD 148
+RWM WK T EQ R+ K+EL+++L+ H L+ DE+TT+RKNL+ ++ D
Sbjct: 778 KQRWMSWKNRTPEQHTRNETKNELERLLKLHEDHTAYLANDEVTTVRKNLEARGVEVDPV 837
Query: 149 YIKDCWDPVYRHHFLIQSLAKALDCKKGFY 178
IKD W ++R HFL ++L C++GFY
Sbjct: 838 LIKDTWHQLFRRHFLQKALLHCNLCRRGFY 867
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 75/88 (85%)
Query: 368 DCCDVVLFWRIQQMLKVTSNALRQQIMNREARRLDKEIKEVLEDYSQDQEKKMILLTGRR 427
+C DVVLFWRIQ+ML +T+N LRQQ+ N E RRL+K +KEVLED+ +D EKK+ L+TGRR
Sbjct: 879 ECNDVVLFWRIQRMLGITANTLRQQLTNTEVRRLEKNVKEVLEDFGEDNEKKVQLITGRR 938
Query: 428 VTLAEELKRVKQIQEKLEEFIKALNTEK 455
V LAE+LK+V++IQEKLE FI+AL+ EK
Sbjct: 939 VQLAEDLKKVREIQEKLEAFIEALHKEK 966
>sp|O93248|OPA1_ONCMA Dynamin-like 120 kDa protein, mitochondrial OS=Oncorhynchus masou
GN=opa1 PE=2 SV=1
Length = 971
Score = 251 bits (642), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 149/188 (79%), Gaps = 1/188 (0%)
Query: 180 DGVTLSSQVTTRNLSFAVSECFWKMVRETVEQQADAFKATRFNLETEWKNSFPRIRELDR 239
DG+ + QVTT+NLS AVS+CFWKMVRE+VEQQADAFKA+RFNLETEWKN++PR+RELDR
Sbjct: 542 DGMLKAHQVTTKNLSLAVSDCFWKMVRESVEQQADAFKASRFNLETEWKNNYPRLRELDR 601
Query: 240 DELFEKARGEILDEIVNLSQVSVQHWEEVLLTQLWNKVSNYVFETIYLPAAQSGNTNAFN 299
+ELFEKA+ EILDE+++LSQV+ +HWE +L +LW +VS +V E IYLPAAQ+ N+ FN
Sbjct: 602 NELFEKAKNEILDEVISLSQVTPKHWEAILQKKLWERVSTHVIENIYLPAAQTMNSGTFN 661
Query: 300 TQMDIKLRQWADQQLPLQSIEAGWEVLKAEFVNFFEKEKNSKDHDGIFDNLKAAVIEEAL 359
T +DIKL+QW D+QLP +++E WE L+ EF F E KD D IFD LK AV +E++
Sbjct: 662 TTVDIKLKQWTDKQLPHKALEVAWETLQEEFARFM-AEYKGKDQDDIFDKLKEAVKDESI 720
Query: 360 RRHSWEHK 367
+RH W +
Sbjct: 721 KRHKWNER 728
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 113/210 (53%), Gaps = 33/210 (15%)
Query: 1 MDIKLRQWADQQLPLQSIEAGWEVLKAEFVNFFEKEKNSKDHDGIFDNLKAAVIEEALRR 60
+DIKL+QW D+QLP +++E WE L+ EF F E KD D IFD LK AV +E+++R
Sbjct: 664 VDIKLKQWTDKQLPHKALEVAWETLQEEFARFM-AEYKGKDQDDIFDKLKEAVKDESIKR 722
Query: 61 HSWEHKGSEMLRILQLNTLEDQC--------------------------------VSPSL 88
H W + + LR++Q N LED+ V P
Sbjct: 723 HKWNERAMDSLRVIQHNALEDRSITDKPQWDAAIQFMEETLQARLKDTDSVINDMVGPDW 782
Query: 89 SERWMYWKYSTEEQVKRSYVKSELDKVLQSDTHHKPVLSPDELTTIRKNLQRSNIDCDAD 148
+RWM WK + EQ R+ ++EL+++L+ H L+ DE+TT+RKNL+ ++ D
Sbjct: 783 KQRWMSWKNRSPEQHTRNETRNELERLLKLHEDHTAYLANDEVTTVRKNLEGRGVEVDPA 842
Query: 149 YIKDCWDPVYRHHFLIQSLAKALDCKKGFY 178
IKD W +YR HFL ++L C++GFY
Sbjct: 843 LIKDTWHQLYRRHFLQKALQHCNLCRRGFY 872
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 75/88 (85%)
Query: 368 DCCDVVLFWRIQQMLKVTSNALRQQIMNREARRLDKEIKEVLEDYSQDQEKKMILLTGRR 427
+C DVVLFWRIQ+ML +T+N LRQQ+ N E RRL+K +KEVLED+ +D E+K+ L+TGRR
Sbjct: 884 ECNDVVLFWRIQRMLLITANTLRQQLTNTEVRRLEKNVKEVLEDFGEDNERKVHLITGRR 943
Query: 428 VTLAEELKRVKQIQEKLEEFIKALNTEK 455
V LAE+LK+V++IQEKLE FI+AL+ EK
Sbjct: 944 VQLAEDLKKVREIQEKLEAFIEALHKEK 971
>sp|Q18AP0|ADDB_CLOD6 ATP-dependent helicase/deoxyribonuclease subunit B OS=Clostridium
difficile (strain 630) GN=addB PE=3 SV=1
Length = 1155
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 374 LFWRIQQMLKVTSNALRQQIMNREARRLDKEIKEVLEDYSQDQEKKMILLTGRRVTLAEE 433
L +R++ ML + QQI +D E+K D + KM+L G+ V+L +
Sbjct: 877 LAYRLKNMLTTAITIISQQIKQGSFEPIDYEVK--FGDNGKYPPIKMVLENGQEVSLIGQ 934
Query: 434 LKRVKQIQEKLEEFIKALN 452
+ RV + +E ++I+ ++
Sbjct: 935 IDRVDEFEEGENKYIRIID 953
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,434,429
Number of Sequences: 539616
Number of extensions: 6355460
Number of successful extensions: 23016
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 22905
Number of HSP's gapped (non-prelim): 162
length of query: 455
length of database: 191,569,459
effective HSP length: 121
effective length of query: 334
effective length of database: 126,275,923
effective search space: 42176158282
effective search space used: 42176158282
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)