Your job contains 1 sequence.
>psy7862
PYLSGLPDSVRAHQVDLTGGSDQVYLIEYFPYFPLITMYLMYYLGEDGKRVYTLKKVDPA
GNPTVSAHPARFSPDDKYSRERITILRRFGLLRTQQPASAM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7862
(101 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-041007-4 - symbol:nop10 "NOP10 ribonucleopr... 248 3.9e-21 1
UNIPROTKB|Q3ZBF2 - symbol:NOP10 "NOP10 ribonucleoprotein ... 234 1.2e-19 1
UNIPROTKB|Q9NPE3 - symbol:NOP10 "H/ACA ribonucleoprotein ... 230 3.1e-19 1
MGI|MGI:1913431 - symbol:Nop10 "NOP10 ribonucleoprotein" ... 230 3.1e-19 1
ASPGD|ASPL0000010487 - symbol:nop10 species:162425 "Emeri... 227 6.5e-19 1
POMBASE|SPAP27G11.13c - symbol:nop10 "snoRNP pseudouridyl... 223 1.7e-18 1
DICTYBASE|DDB_G0288347 - symbol:nola3 "Nop10 family prote... 213 2.0e-17 1
SGD|S000007455 - symbol:NOP10 "Constituent of small nucle... 212 2.5e-17 1
TAIR|locus:2054804 - symbol:NOP10 "AT2G20490" species:370... 193 2.6e-15 1
WB|WBGene00007708 - symbol:nola-3 species:6239 "Caenorhab... 185 1.8e-14 1
>ZFIN|ZDB-GENE-041007-4 [details] [associations]
symbol:nop10 "NOP10 ribonucleoprotein homolog
(yeast)" species:7955 "Danio rerio" [GO:0060215 "primitive
hemopoiesis" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=IEA;IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
Pfam:PF04135 ZFIN:ZDB-GENE-041007-4 GO:GO:0005730 GO:GO:0030529
GO:GO:0006364 HOGENOM:HOG000159681 KO:K11130 InterPro:IPR007264
PANTHER:PTHR13305 GeneTree:ENSGT00390000012563 EMBL:AY648784
EMBL:BC095081 IPI:IPI00495858 RefSeq:NP_001003868.1
UniGene:Dr.78253 ProteinModelPortal:Q6DRH5 SMR:Q6DRH5 PRIDE:Q6DRH5
Ensembl:ENSDART00000130241 GeneID:445391 KEGG:dre:445391 CTD:55505
HOVERGEN:HBG080280 InParanoid:Q6DRH5 NextBio:20832096 Bgee:Q6DRH5
Uniprot:Q6DRH5
Length = 64
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 45/60 (75%), Positives = 53/60 (88%)
Query: 38 MYLMYYLGEDGKRVYTLKKVDPAGNPTVSAHPARFSPDDKYSRERITILRRFGLLRTQQP 97
M+L +YL E+G+RVYTLKKVDP+G PT SAHPARFSPDDK+SR R+TI +RFGLL TQQP
Sbjct: 1 MFLQFYLNENGERVYTLKKVDPSGQPTSSAHPARFSPDDKFSRHRVTIKKRFGLLLTQQP 60
>UNIPROTKB|Q3ZBF2 [details] [associations]
symbol:NOP10 "NOP10 ribonucleoprotein homolog (Yeast)"
species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
Pfam:PF04135 GO:GO:0003676 GO:GO:0030529 eggNOG:COG2260
HOGENOM:HOG000159681 KO:K11130 OMA:VYTLKKV InterPro:IPR007264
PANTHER:PTHR13305 GeneTree:ENSGT00390000012563 CTD:55505
HOVERGEN:HBG080280 OrthoDB:EOG4RR6K2 EMBL:DAAA02028380
EMBL:BC103378 IPI:IPI00697237 RefSeq:NP_001107993.1
UniGene:Bt.61719 SMR:Q3ZBF2 STRING:Q3ZBF2
Ensembl:ENSBTAT00000036177 GeneID:616675 KEGG:bta:616675
InParanoid:Q3ZBF2 NextBio:20900254 Uniprot:Q3ZBF2
Length = 64
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 44/60 (73%), Positives = 49/60 (81%)
Query: 38 MYLMYYLGEDGKRVYTLKKVDPAGNPTVSAHPARFSPDDKYSRERITILRRFGLLRTQQP 97
M+L YYL E G+RVYTLKK+DP G T SAHPARFSPDDKYSR RITI +RF +L TQQP
Sbjct: 1 MFLQYYLNEQGERVYTLKKLDPLGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP 60
>UNIPROTKB|Q9NPE3 [details] [associations]
symbol:NOP10 "H/ACA ribonucleoprotein complex subunit 3"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=TAS] [GO:0001522 "pseudouridine
synthesis" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF04135 GO:GO:0005730 GO:GO:0015030
GO:GO:0006364 GO:GO:0001522 Orphanet:1775 GO:GO:0005732
eggNOG:COG2260 HOGENOM:HOG000159681 KO:K11130 OMA:VYTLKKV
InterPro:IPR007264 PANTHER:PTHR13305 CTD:55505 HOVERGEN:HBG080280
EMBL:AB043103 EMBL:AB043104 EMBL:BC008886 EMBL:BC063023
IPI:IPI00032853 RefSeq:NP_061118.1 UniGene:Hs.14317
ProteinModelPortal:Q9NPE3 SMR:Q9NPE3 IntAct:Q9NPE3 STRING:Q9NPE3
DMDM:54036209 PaxDb:Q9NPE3 PeptideAtlas:Q9NPE3 PRIDE:Q9NPE3
Ensembl:ENST00000328848 GeneID:55505 KEGG:hsa:55505 UCSC:uc001zie.1
GeneCards:GC15M034633 HGNC:HGNC:14378 MIM:224230 MIM:606471
neXtProt:NX_Q9NPE3 PharmGKB:PA164723973 InParanoid:Q9NPE3
OrthoDB:EOG4RR6K2 PhylomeDB:Q9NPE3 GenomeRNAi:55505 NextBio:59899
Bgee:Q9NPE3 CleanEx:HS_NOP10 Genevestigator:Q9NPE3
GermOnline:ENSG00000182117 Uniprot:Q9NPE3
Length = 64
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 44/60 (73%), Positives = 47/60 (78%)
Query: 38 MYLMYYLGEDGKRVYTLKKVDPAGNPTVSAHPARFSPDDKYSRERITILRRFGLLRTQQP 97
M+L YYL E G RVYTLKK DP G T SAHPARFSPDDKYSR RITI +RF +L TQQP
Sbjct: 1 MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP 60
>MGI|MGI:1913431 [details] [associations]
symbol:Nop10 "NOP10 ribonucleoprotein" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] MGI:MGI:1913431 Pfam:PF04135
GO:GO:0005730 GO:GO:0030529 GO:GO:0015030 GO:GO:0006364
eggNOG:COG2260 HOGENOM:HOG000159681 KO:K11130 OMA:VYTLKKV
InterPro:IPR007264 PANTHER:PTHR13305 GeneTree:ENSGT00390000012563
CTD:55505 HOVERGEN:HBG080280 OrthoDB:EOG4RR6K2 EMBL:AK004120
EMBL:AK012875 EMBL:BC028497 IPI:IPI00133008 RefSeq:NP_079679.1
UniGene:Mm.272346 ProteinModelPortal:Q9CQS2 SMR:Q9CQS2
STRING:Q9CQS2 PaxDb:Q9CQS2 PRIDE:Q9CQS2 Ensembl:ENSMUST00000028553
GeneID:66181 KEGG:mmu:66181 UCSC:uc008lor.1 InParanoid:Q9CQS2
NextBio:320882 Bgee:Q9CQS2 Genevestigator:Q9CQS2
GermOnline:ENSMUSG00000027133 Uniprot:Q9CQS2
Length = 64
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 44/60 (73%), Positives = 47/60 (78%)
Query: 38 MYLMYYLGEDGKRVYTLKKVDPAGNPTVSAHPARFSPDDKYSRERITILRRFGLLRTQQP 97
M+L YYL E G RVYTLKK DP G T SAHPARFSPDDKYSR RITI +RF +L TQQP
Sbjct: 1 MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP 60
>ASPGD|ASPL0000010487 [details] [associations]
symbol:nop10 species:162425 "Emericella nidulans"
[GO:0031120 "snRNA pseudouridine synthesis" evidence=IEA]
[GO:0000469 "cleavage involved in rRNA processing" evidence=IEA]
[GO:0031118 "rRNA pseudouridine synthesis" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0031429 "box H/ACA
snoRNP complex" evidence=IEA] Pfam:PF04135 GO:GO:0003723
EMBL:BN001302 GO:GO:0031429 GO:GO:0031118 GO:GO:0031120
GO:GO:0000469 HOGENOM:HOG000159681 OMA:VYTLKKV InterPro:IPR007264
PANTHER:PTHR13305 EnsemblFungi:CADANIAT00004312 Uniprot:C8V7I2
Length = 67
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 43/59 (72%), Positives = 49/59 (83%)
Query: 38 MYLMYYLGEDGKRVYTLKKVDPAGNPTVSAHPARFSPDDKYSRERITILRRFGLLRTQQ 96
M+LMY L +DGKRVYTLKKV P G T SAHPARFSPDDKYSR R+T+ +R+GLL TQQ
Sbjct: 1 MHLMYTLDQDGKRVYTLKKVTPTGEVTKSAHPARFSPDDKYSRHRVTLKKRYGLLLTQQ 59
>POMBASE|SPAP27G11.13c [details] [associations]
symbol:nop10 "snoRNP pseudouridylase box H/ACA snoRNP
complex protein (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0005730 "nucleolus" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] [GO:0019843 "rRNA binding" evidence=IC]
[GO:0031118 "rRNA pseudouridine synthesis" evidence=ISO]
[GO:0031120 "snRNA pseudouridine synthesis" evidence=ISO]
[GO:0031429 "box H/ACA snoRNP complex" evidence=ISO] [GO:0034513
"box H/ACA snoRNA binding" evidence=ISO] PomBase:SPAP27G11.13c
Pfam:PF04135 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0019843
GO:GO:0031429 GO:GO:0031118 GO:GO:0031120 GO:GO:0034513
eggNOG:COG2260 HOGENOM:HOG000159681 KO:K11130 OMA:VYTLKKV
InterPro:IPR007264 PANTHER:PTHR13305 RefSeq:NP_593418.1
ProteinModelPortal:Q9P7M5 SMR:Q9P7M5 STRING:Q9P7M5 PRIDE:Q9P7M5
EnsemblFungi:SPAP27G11.13c.1 GeneID:2542636 KEGG:spo:SPAP27G11.13c
OrthoDB:EOG4ZW8MX NextBio:20803685 Uniprot:Q9P7M5
Length = 64
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 42/61 (68%), Positives = 50/61 (81%)
Query: 38 MYLMYYLGEDGKRVYTLKKVDPAGNPTVSAHPARFSPDDKYSRERITILRRFGLLRTQQP 97
M+LMYYL ++GKRVYTLKKV P G T S+HPARFSPDDKYSR+R T+ +RF +L TQ P
Sbjct: 1 MHLMYYLNDEGKRVYTLKKVSPDGRVTKSSHPARFSPDDKYSRQRYTLKKRFHVLLTQLP 60
Query: 98 A 98
A
Sbjct: 61 A 61
>DICTYBASE|DDB_G0288347 [details] [associations]
symbol:nola3 "Nop10 family protein" species:44689
"Dictyostelium discoideum" [GO:0006364 "rRNA processing"
evidence=IEA;IC] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] dictyBase:DDB_G0288347
Pfam:PF04135 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003723
EMBL:AAFI02000111 GO:GO:0006364 GO:GO:0005732 eggNOG:COG2260
KO:K11130 OMA:VYTLKKV InterPro:IPR007264 PANTHER:PTHR13305
RefSeq:XP_636775.1 HSSP:Q6Q547 ProteinModelPortal:Q54J26 SMR:Q54J26
STRING:Q54J26 EnsemblProtists:DDB0235394 GeneID:8626578
KEGG:ddi:DDB_G0288347 ProtClustDB:CLSZ2440040 Uniprot:Q54J26
Length = 64
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 42/60 (70%), Positives = 47/60 (78%)
Query: 38 MYLMYYLGEDGKRVYTLKKVDPAGNPTVSAHPARFSPDDKYSRERITILRRFGLLRTQQP 97
M+LMYY +DG+RVYTLKK P T SAHPARFS DDKYSRERI + +RFGLL TQQP
Sbjct: 1 MHLMYYNDKDGQRVYTLKKESPNHEATYSAHPARFSVDDKYSRERIALKKRFGLLLTQQP 60
>SGD|S000007455 [details] [associations]
symbol:NOP10 "Constituent of small nucleolar
ribonucleoprotein particles" species:4932 "Saccharomyces
cerevisiae" [GO:0003723 "RNA binding" evidence=IDA] [GO:0031118
"rRNA pseudouridine synthesis" evidence=IMP] [GO:0005730
"nucleolus" evidence=IEA] [GO:0031120 "snRNA pseudouridine
synthesis" evidence=IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0031429 "box H/ACA snoRNP complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0000469 "cleavage involved in rRNA processing"
evidence=IMP] SGD:S000007455 Pfam:PF04135 EMBL:BK006934
GO:GO:0003723 GO:GO:0031429 GO:GO:0031118 GO:GO:0031120 PDB:3U28
PDB:3UAI PDBsum:3U28 PDBsum:3UAI EMBL:U10556 GO:GO:0000469
eggNOG:COG2260 HOGENOM:HOG000159681 KO:K11130 OMA:VYTLKKV
InterPro:IPR007264 PANTHER:PTHR13305 GeneTree:ENSGT00390000012563
OrthoDB:EOG4ZW8MX EMBL:AY558548 RefSeq:NP_058135.1 PDB:1Y2Y
PDB:2AQA PDBsum:1Y2Y PDBsum:2AQA DisProt:DP00475
ProteinModelPortal:Q6Q547 SMR:Q6Q547 DIP:DIP-5845N IntAct:Q6Q547
MINT:MINT-2786302 STRING:Q6Q547 PaxDb:Q6Q547 EnsemblFungi:YHR072W-A
GeneID:856471 KEGG:sce:YHR072W-A CYGD:YHR072w-a
EvolutionaryTrace:Q6Q547 NextBio:982137 Genevestigator:Q6Q547
GermOnline:YHR072W-A Uniprot:Q6Q547
Length = 58
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 40/58 (68%), Positives = 48/58 (82%)
Query: 38 MYLMYYLGEDGKRVYTLKKVDPAGNPTVSAHPARFSPDDKYSRERITILRRFGLLRTQ 95
M+LMY LG DGKR+YTLKKV +G T SAHPARFSPDDKYSR+R+T+ +RFGL+ Q
Sbjct: 1 MHLMYTLGPDGKRIYTLKKVTESGEITKSAHPARFSPDDKYSRQRVTLKKRFGLVPGQ 58
>TAIR|locus:2054804 [details] [associations]
symbol:NOP10 "AT2G20490" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0015030 "Cajal body" evidence=IDA] [GO:0010197 "polar nucleus
fusion" evidence=IMP] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006364 "rRNA processing" evidence=RCA] Pfam:PF04135
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0030529
GO:GO:0015030 GO:GO:0006364 GO:GO:0010197 EMBL:AC007109
EMBL:AY054656 EMBL:BT001178 EMBL:AY087879 IPI:IPI00545183
PIR:H84589 RefSeq:NP_565472.1 UniGene:At.14375
ProteinModelPortal:Q93XX8 SMR:Q93XX8 IntAct:Q93XX8 STRING:Q93XX8
PaxDb:Q93XX8 PRIDE:Q93XX8 EnsemblPlants:AT2G20490.1 GeneID:816569
KEGG:ath:AT2G20490 TAIR:At2g20490 eggNOG:COG2260
HOGENOM:HOG000159681 InParanoid:Q93XX8 KO:K11130 OMA:VYTLKKV
PhylomeDB:Q93XX8 ProtClustDB:CLSN2688272 Genevestigator:Q93XX8
InterPro:IPR007264 PANTHER:PTHR13305 Uniprot:Q93XX8
Length = 64
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 36/58 (62%), Positives = 44/58 (75%)
Query: 38 MYLMYYLGEDGKRVYTLKKVDPAGNPTVSAHPARFSPDDKYSRERITILRRFGLLRTQ 95
MYL Y+ E G++VYT KK P G T SAHPARFSPDDKYS++R+ + +RFGLL TQ
Sbjct: 1 MYLQCYINEKGEKVYTTKKESPLGLATESAHPARFSPDDKYSKQRVLLKKRFGLLPTQ 58
>WB|WBGene00007708 [details] [associations]
symbol:nola-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
Pfam:PF04135 GO:GO:0040010 GO:GO:0005730 GO:GO:0030529 EMBL:Z81038
GO:GO:0006364 eggNOG:COG2260 HOGENOM:HOG000159681 OMA:VYTLKKV
InterPro:IPR007264 PANTHER:PTHR13305 PIR:T19444 RefSeq:NP_492679.1
ProteinModelPortal:Q9XVR8 SMR:Q9XVR8 STRING:Q9XVR8 PaxDb:Q9XVR8
EnsemblMetazoa:C25A1.6 GeneID:172883 KEGG:cel:CELE_C25A1.6
UCSC:C25A1.6.1 CTD:172883 WormBase:C25A1.6
GeneTree:ENSGT00390000012563 InParanoid:Q9XVR8 NextBio:877391
Uniprot:Q9XVR8
Length = 64
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 35/59 (59%), Positives = 47/59 (79%)
Query: 38 MYLMYYLGEDGKRVYTLKKVDPAGNPTVSAHPARFSPDDKYSRERITILRRFGLLRTQQ 96
M+L Y+L E+ +RVYTLK+ P+G T++AHPARFSP+DK S+ RI I +RFGLL TQ+
Sbjct: 1 MFLRYFLDENQQRVYTLKRTAPSGEQTLTAHPARFSPEDKNSKYRIIIKKRFGLLPTQK 59
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.140 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 101 101 0.00091 102 3 11 22 0.39 30
29 0.47 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 494 (53 KB)
Total size of DFA: 100 KB (2071 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.82u 0.08s 10.90t Elapsed: 00:00:05
Total cpu time: 10.82u 0.08s 10.90t Elapsed: 00:00:05
Start: Thu Aug 15 17:11:00 2013 End: Thu Aug 15 17:11:05 2013