BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy787
(235 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 302 bits (773), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/203 (75%), Positives = 175/203 (86%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
K+IGKY+MGDLLGEGSYGKVKE+LDSETLCRRAVKI KKKKL+RIPNGE NV +EI+LL
Sbjct: 1 AKLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLL 60
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLD 152
+ L+H+NVI LVDV N++KQKMY++MEYCV G+Q+MLDS P K+FP+ QAHGYF QL+D
Sbjct: 61 RRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLID 120
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAP 212
GLEYLHSQGI+HKDIKPGNLLLT GTLKIS GVAE+L F DDT TSQGSP FQ P
Sbjct: 121 GLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPP 180
Query: 213 EIANGLPEISGYKVDIWSSGVTL 235
EIANGL SG+KVDIWS+GVTL
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTL 203
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 27/223 (12%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRI----------------- 78
+ +Y + D +G+GSYG VK + A+K+ KKKL R
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 79 ----PNGEI-NVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDST 133
P G I V +EI +LK L H NV+ LV+V + + +Y++ E G +++
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQG--PVMEVP 129
Query: 134 PYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDM 193
K QA YF L+ G+EYLH Q IIH+DIKP NLL+ DG +KI+DFGV+
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 194 FLHDDTITTSQGSPVFQAPEIANGLPEI-SGYKVDIWSSGVTL 235
D ++ + G+P F APE + +I SG +D+W+ GVTL
Sbjct: 190 --SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 119/206 (57%), Gaps = 9/206 (4%)
Query: 30 TIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREI 89
I + IG Y++ + LGEGS+GKVK +T + A+K F ++L + + + V+REI
Sbjct: 2 AISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALK-FISRQLLKKSDMHMRVEREI 60
Query: 90 RLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQ 149
LK+L+H ++I L DV + +++EY G L D + K+ + +F Q
Sbjct: 61 SYLKLLRHPHIIKLYDVITT--PTDIVMVIEYAGGELFDYI--VEKKRMTEDEGRRFFQQ 116
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
++ +EY H I+H+D+KP NLLL + +KI+DFG++ ++ + + TS GSP +
Sbjct: 117 IICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS---NIMTDGNFLKTSCGSPNY 173
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
APE+ NG +G +VD+WS G+ L
Sbjct: 174 AAPEVING-KLYAGPEVDVWSCGIVL 198
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 115/200 (57%), Gaps = 9/200 (4%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
IG Y + LGEGS+GKVK + T + A+KI KK L + + + ++REI L++L
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK-SDMQGRIEREISYLRLL 70
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
+H ++I L DV K ++ +++EY L D + K +A +F Q++ +E
Sbjct: 71 RHPHIIKLYDVI--KSKDEIIMVIEYAGNELFDYI--VQRDKMSEQEARRFFQQIISAVE 126
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIA 215
Y H I+H+D+KP NLLL +KI+DFG++ ++ + + TS GSP + APE+
Sbjct: 127 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS---NIMTDGNFLKTSCGSPNYAAPEVI 183
Query: 216 NGLPEISGYKVDIWSSGVTL 235
+G +G +VD+WS GV L
Sbjct: 184 SG-KLYAGPEVDVWSCGVIL 202
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 115/200 (57%), Gaps = 9/200 (4%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
IG Y + LGEGS+GKVK + T + A+KI KK L + + + ++REI L++L
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK-SDMQGRIEREISYLRLL 71
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
+H ++I L DV K ++ +++EY L D + K +A +F Q++ +E
Sbjct: 72 RHPHIIKLYDVI--KSKDEIIMVIEYAGNELFDYI--VQRDKMSEQEARRFFQQIISAVE 127
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIA 215
Y H I+H+D+KP NLLL +KI+DFG++ ++ + + TS GSP + APE+
Sbjct: 128 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS---NIMTDGNFLKTSCGSPNYAAPEVI 184
Query: 216 NGLPEISGYKVDIWSSGVTL 235
+G +G +VD+WS GV L
Sbjct: 185 SG-KLYAGPEVDVWSCGVIL 203
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 115/200 (57%), Gaps = 9/200 (4%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
IG Y + LGEGS+GKVK + T + A+KI KK L + + + ++REI L++L
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK-SDMQGRIEREISYLRLL 61
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
+H ++I L DV K ++ +++EY L D + K +A +F Q++ +E
Sbjct: 62 RHPHIIKLYDVI--KSKDEIIMVIEYAGNELFDYI--VQRDKMSEQEARRFFQQIISAVE 117
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIA 215
Y H I+H+D+KP NLLL +KI+DFG++ ++ + + TS GSP + APE+
Sbjct: 118 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS---NIMTDGNFLKTSCGSPNYAAPEVI 174
Query: 216 NGLPEISGYKVDIWSSGVTL 235
+G +G +VD+WS GV L
Sbjct: 175 SG-KLYAGPEVDVWSCGVIL 193
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 115/200 (57%), Gaps = 9/200 (4%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
IG Y + LGEGS+GKVK + T + A+KI KK L + + + ++REI L++L
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK-SDMQGRIEREISYLRLL 65
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
+H ++I L DV K ++ +++EY L D + K +A +F Q++ +E
Sbjct: 66 RHPHIIKLYDVI--KSKDEIIMVIEYAGNELFDYI--VQRDKMSEQEARRFFQQIISAVE 121
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIA 215
Y H I+H+D+KP NLLL +KI+DFG++ ++ + + TS GSP + APE+
Sbjct: 122 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS---NIMTDGNFLKTSCGSPNYAAPEVI 178
Query: 216 NGLPEISGYKVDIWSSGVTL 235
+G +G +VD+WS GV L
Sbjct: 179 SG-KLYAGPEVDVWSCGVIL 197
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 110 bits (274), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 120/242 (49%), Gaps = 46/242 (19%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRI-PNGEINVDREIRLLKMLQ 96
KY + +G+GSYG V+ ++++T RA+KI K K+++I P + E+RL+K L
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDML-----DSTPYKKFPIWQA------- 143
H N+ L +V+ + +Q + L+ME C GG L D L DST + +
Sbjct: 87 HPNIARLYEVY--EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPE 144
Query: 144 ----------HGY----------------FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD 177
HG+ Q+ L YLH+QGI H+DIKP N L + +
Sbjct: 145 CNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN 204
Query: 178 GT--LKISDFGVAESLDMFLHDDT--ITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGV 233
+ +K+ DFG+++ + + +TT G+P F APE+ N E G K D WS+GV
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
Query: 234 TL 235
L
Sbjct: 265 LL 266
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 114/201 (56%), Gaps = 10/201 (4%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
IG YV+GD LG G++GKVK T + AVKI ++K++ + + + REI+ LK+
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSL-DVVGKIKREIQNLKLF 68
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
+H ++I L V +++MEY GG ++ D + + +A F Q+L +
Sbjct: 69 RHPHIIKLYQVI--STPTDFFMVMEYVSGG--ELFDYICKHGRVEEMEARRLFQQILSAV 124
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
+Y H ++H+D+KP N+LL KI+DFG++ +M + + TS GSP + APE+
Sbjct: 125 DYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS---NMMSDGEFLRTSCGSPNYAAPEV 181
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
+G +G +VDIWS GV L
Sbjct: 182 ISGR-LYAGPEVDIWSCGVIL 201
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 11/201 (5%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
IG Y + +G+G++ KVK T AVKI K +L P + RE+R++K+L
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLN--PTSLQKLFREVRIMKIL 71
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H N++ L +V +K +YL+MEY GG ++ D + + +A F Q++ +
Sbjct: 72 NHPNIVKLFEVIETEKT--LYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAV 127
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
+Y H + I+H+D+K NLLL D +KI+DFG + F + + T GSP + APE+
Sbjct: 128 QYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNE---FTVGNKLDTFCGSPPYAAPEL 184
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
G + G +VD+WS GV L
Sbjct: 185 FQG-KKYDGPEVDVWSLGVIL 204
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 115/201 (57%), Gaps = 10/201 (4%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
IG Y++GD LG G++GKVK T + AVKI ++K++ + + + REI+ LK+
Sbjct: 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSL-DVVGKIRREIQNLKLF 73
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYK-KFPIWQAHGYFLQLLDGL 154
+H ++I L V ++++MEY GG ++ D + ++ F Q+L G+
Sbjct: 74 RHPHIIKLYQVI--STPSDIFMVMEYVSGG--ELFDYICKNGRLDEKESRRLFQQILSGV 129
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
+Y H ++H+D+KP N+LL KI+DFG++ +M + + S GSP + APE+
Sbjct: 130 DYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS---NMMSDGEFLRXSCGSPNYAAPEV 186
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
+G +G +VDIWSSGV L
Sbjct: 187 ISGR-LYAGPEVDIWSSGVIL 206
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 108/201 (53%), Gaps = 11/201 (5%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
IG Y + +G+G++ KVK L L R V I K Q P + RE+R++K+L
Sbjct: 11 IGNYRLLKTIGKGNFAKVK--LARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL 68
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H N++ L +V +K +YLIMEY GG ++ D + + +A F Q++ +
Sbjct: 69 NHPNIVKLFEVIETEKT--LYLIMEYASGG--EVFDYLVAHGRMKEKEARSKFRQIVSAV 124
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
+Y H + I+H+D+K NLLL D +KI+DFG + + DT GSP + APE+
Sbjct: 125 QYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC---GSPPYAAPEL 181
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
G + G +VD+WS GV L
Sbjct: 182 FQG-KKYDGPEVDVWSLGVIL 201
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 106 bits (265), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 113/201 (56%), Gaps = 10/201 (4%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
IG YV+GD LG G++GKVK T + AVKI ++K++ + + + REI+ LK+
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSL-DVVGKIKREIQNLKLF 68
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
+H ++I L V +++MEY GG ++ D + + +A F Q+L +
Sbjct: 69 RHPHIIKLYQVI--STPTDFFMVMEYVSGG--ELFDYICKHGRVEEMEARRLFQQILSAV 124
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
+Y H ++H+D+KP N+LL KI+DFG++ +M + + S GSP + APE+
Sbjct: 125 DYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS---NMMSDGEFLRDSCGSPNYAAPEV 181
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
+G +G +VDIWS GV L
Sbjct: 182 ISGR-LYAGPEVDIWSCGVIL 201
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 111/201 (55%), Gaps = 11/201 (5%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
IG Y + +G+G++ KVK T AVKI K +L + + RE+R++K+L
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN--SSSLQKLFREVRIMKVL 70
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H N++ L +V +K +YL+MEY GG ++ D + + +A F Q++ +
Sbjct: 71 NHPNIVKLFEVIETEKT--LYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
+Y H + I+H+D+K NLLL D +KI+DFG + + F + + T GSP + APE+
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPEL 183
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
G + G +VD+WS GV L
Sbjct: 184 FQG-KKYDGPEVDVWSLGVIL 203
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 111/201 (55%), Gaps = 11/201 (5%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
IG Y + +G+G++ KVK T AVKI K +L + + RE+R++K+L
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN--SSSLQKLFREVRIMKVL 70
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H N++ L +V +K +YL+MEY GG ++ D + + +A F Q++ +
Sbjct: 71 NHPNIVKLFEVIETEKT--LYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
+Y H + I+H+D+K NLLL D +KI+DFG + + F + + T GSP + APE+
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPEL 183
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
G + G +VD+WS GV L
Sbjct: 184 FQG-KKYDGPEVDVWSLGVIL 203
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 111/201 (55%), Gaps = 11/201 (5%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
IG Y + +G+G++ KVK T AVKI K +L + + RE+R++K+L
Sbjct: 6 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN--SSSLQKLFREVRIMKVL 63
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLDGL 154
H N++ L +V +K +YL+MEY GG + D L + + K +A F Q++ +
Sbjct: 64 NHPNIVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGWMKEK--EARAKFRQIVSAV 119
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
+Y H + I+H+D+K NLLL D +KI+DFG + F + + T GSP + APE+
Sbjct: 120 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE---FTFGNKLDTFCGSPPYAAPEL 176
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
G + G +VD+WS GV L
Sbjct: 177 FQG-KKYDGPEVDVWSLGVIL 196
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEIXIN 58
Query: 93 KMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQ 149
KML H NV+ F +++ YL +EYC GG ++ D P P A +F Q
Sbjct: 59 KMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+ +
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
APE+ E VD+WS G+ L
Sbjct: 173 VAPELLKRR-EFHAEPVDVWSCGIVL 197
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 105/208 (50%), Gaps = 13/208 (6%)
Query: 31 IKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+ V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI
Sbjct: 1 MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEIX 57
Query: 91 LLKMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYF 147
+ KML H NV+ F +++ YL +EYC GG ++ D P P A +F
Sbjct: 58 INKMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFF 111
Query: 148 LQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSP 207
QL+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 171
Query: 208 VFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ E VD+WS G+ L
Sbjct: 172 PYVAPELLKRR-EFHAEPVDVWSCGIVL 198
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 107/201 (53%), Gaps = 11/201 (5%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
IG Y + +G+G++ KVK L L R V I K Q P + RE+R++K+L
Sbjct: 14 IGNYRLLKTIGKGNFAKVK--LARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL 71
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H N++ L +V +K +YLIMEY GG ++ D + + +A F Q++ +
Sbjct: 72 NHPNIVKLFEVIETEKT--LYLIMEYASGG--EVFDYLVAHGRMKEKEARSKFRQIVSAV 127
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
+Y H + I+H+D+K NLLL D +KI+DFG + + D G+P + APE+
Sbjct: 128 QYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC---GAPPYAAPEL 184
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
G + G +VD+WS GV L
Sbjct: 185 FQG-KKYDGPEVDVWSLGVIL 204
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 11/201 (5%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
IG Y + +G+G++ KVK T AV+I K +L + + RE+R++K+L
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLN--SSSLQKLFREVRIMKVL 70
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H N++ L +V +K +YL+MEY GG ++ D + + +A F Q++ +
Sbjct: 71 NHPNIVKLFEVIETEKT--LYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
+Y H + I+H+D+K NLLL D +KI+DFG + + F + + T GSP + APE+
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPEL 183
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
G + G +VD+WS GV L
Sbjct: 184 FQG-KKYDGPEVDVWSLGVIL 203
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 104/197 (52%), Gaps = 17/197 (8%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G++GKV + + ET A K+ K + + + + +D +L H N++ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEID----ILASCDHPNIVKLL 100
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIH 164
D F + +++++E+C GG D + + Q Q LD L YLH IIH
Sbjct: 101 DAFYYE--NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 165 KDIKPGNLLLTLDGTLKISDFGV-AESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
+D+K GN+L TLDG +K++DFGV A++ D+ G+P + APE+ + E S
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI---GTPYWMAPEVV--MCETSK 213
Query: 224 -----YKVDIWSSGVTL 235
YK D+WS G+TL
Sbjct: 214 DRPYDYKADVWSLGITL 230
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 67
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+D +D++ P+ Y QLL GL + HS
Sbjct: 68 KLLDVI--HTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 183
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 184 ST-AVDIWSLGC 194
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 104/197 (52%), Gaps = 17/197 (8%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G++GKV + + ET A K+ K + + + + +D +L H N++ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEID----ILASCDHPNIVKLL 100
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIH 164
D F + +++++E+C GG D + + Q Q LD L YLH IIH
Sbjct: 101 DAFYYE--NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 165 KDIKPGNLLLTLDGTLKISDFGV-AESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
+D+K GN+L TLDG +K++DFGV A++ D+ G+P + APE+ + E S
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI---GTPYWMAPEVV--MCETSK 213
Query: 224 -----YKVDIWSSGVTL 235
YK D+WS G+TL
Sbjct: 214 DRPYDYKADVWSLGITL 230
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEIXIN 58
Query: 93 KMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQ 149
KML H NV+ F +++ YL +EYC GG ++ D P P A +F Q
Sbjct: 59 KMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+ +
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
APE+ E VD+WS G+ L
Sbjct: 173 VAPELLKRR-EFHAEPVDVWSCGIVL 197
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICIN 58
Query: 93 KMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQ 149
KML H NV+ F +++ YL +EYC GG ++ D P P A +F Q
Sbjct: 59 KMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+ +
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
APE+ E VD+WS G+ L
Sbjct: 173 VAPELLKRR-EFHAEPVDVWSCGIVL 197
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICIN 58
Query: 93 KMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQ 149
KML H NV+ F +++ YL +EYC GG ++ D P P A +F Q
Sbjct: 59 KMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+ +
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
APE+ E VD+WS G+ L
Sbjct: 173 VAPELLKRR-EFHAEPVDVWSCGIVL 197
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICIN 58
Query: 93 KMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQ 149
KML H NV+ F +++ YL +EYC GG ++ D P P A +F Q
Sbjct: 59 KMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+ +
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
APE+ E VD+WS G+ L
Sbjct: 173 VAPELLKRR-EFHAEPVDVWSCGIVL 197
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 65
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+D +D++ P+ Y QLL GL + HS
Sbjct: 66 KLLDVI--HTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 181
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 182 ST-AVDIWSLGC 192
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 68
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+D +D++ P+ Y QLL GL + HS
Sbjct: 69 KLLDVI--HTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 184
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 185 ST-AVDIWSLGC 195
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 65
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 66 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR 123
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T T + ++APEI G
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 181
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 182 ST-AVDIWSLGC 192
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 64
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 65 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T T + ++APEI G
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 180
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 181 ST-AVDIWSLGC 191
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 105/208 (50%), Gaps = 13/208 (6%)
Query: 31 IKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+ V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI
Sbjct: 1 MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEIC 57
Query: 91 LLKMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYF 147
+ KML H NV+ F +++ YL +EYC GG ++ D P P A +F
Sbjct: 58 INKMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFF 111
Query: 148 LQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSP 207
QL+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 208 VFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ E VD+WS G+ L
Sbjct: 172 PYVAPELLKRR-EFHAEPVDVWSCGIVL 198
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 65
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 66 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T T + ++APEI G
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 181
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 182 ST-AVDIWSLGC 192
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 64
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 65 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T T + ++APEI G
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 180
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 181 ST-AVDIWSLGC 191
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 65
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 66 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T T + ++APEI G
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 181
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 182 ST-AVDIWSLGC 192
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 66
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 67 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T T + ++APEI G
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 182
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 183 ST-AVDIWSLGC 193
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICIN 58
Query: 93 KMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQ 149
KML H NV+ F +++ YL +EYC GG ++ D P P A +F Q
Sbjct: 59 KMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+ +
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
APE+ E VD+WS G+ L
Sbjct: 173 VAPELLKRR-EFHAEPVDVWSCGIVL 197
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICIN 58
Query: 93 KMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQ 149
KML H NV+ F +++ YL +EYC GG ++ D P P A +F Q
Sbjct: 59 KMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+ +
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
APE+ E VD+WS G+ L
Sbjct: 173 VAPELLKRR-EFHAEPVDVWSCGIVL 197
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 105/208 (50%), Gaps = 13/208 (6%)
Query: 31 IKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+ V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI
Sbjct: 1 MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEIC 57
Query: 91 LLKMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYF 147
+ KML H NV+ F +++ YL +EYC GG ++ D P P A +F
Sbjct: 58 INKMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFF 111
Query: 148 LQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSP 207
QL+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 208 VFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ E VD+WS G+ L
Sbjct: 172 PYVAPELLKRR-EFHAEPVDVWSCGIVL 198
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 105/208 (50%), Gaps = 13/208 (6%)
Query: 31 IKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+ V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI
Sbjct: 1 MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEIC 57
Query: 91 LLKMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYF 147
+ KML H NV+ F +++ YL +EYC GG ++ D P P A +F
Sbjct: 58 INKMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFF 111
Query: 148 LQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSP 207
QL+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 208 VFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ E VD+WS G+ L
Sbjct: 172 PYVAPELLKRR-EFHAEPVDVWSCGIVL 198
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 105/208 (50%), Gaps = 13/208 (6%)
Query: 31 IKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+ V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI
Sbjct: 1 MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEIC 57
Query: 91 LLKMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYF 147
+ KML H NV+ F +++ YL +EYC GG ++ D P P A +F
Sbjct: 58 INKMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFF 111
Query: 148 LQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSP 207
QL+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 208 VFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ E VD+WS G+ L
Sbjct: 172 PYVAPELLKRR-EFHAEPVDVWSCGIVL 198
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 105/208 (50%), Gaps = 13/208 (6%)
Query: 31 IKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+ V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI
Sbjct: 1 MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEIC 57
Query: 91 LLKMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYF 147
+ KML H NV+ F +++ YL +EYC GG ++ D P P A +F
Sbjct: 58 INKMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFF 111
Query: 148 LQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSP 207
QL+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 208 VFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ E VD+WS G+ L
Sbjct: 172 PYVAPELLKRR-EFHAEPVDVWSCGIVL 198
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 105/191 (54%), Gaps = 13/191 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 65
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 66 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T T + ++APEI G
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGXKYY 181
Query: 222 SGYKVDIWSSG 232
S VDIWS G
Sbjct: 182 ST-AVDIWSLG 191
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICIN 58
Query: 93 KMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQ 149
KML H NV+ F +++ YL +EYC GG ++ D P P A +F Q
Sbjct: 59 KMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+ +
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
APE+ E VD+WS G+ L
Sbjct: 173 VAPELLKRR-EFHAEPVDVWSCGIVL 197
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 64
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 65 KLLDVI--HTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T T + ++APEI G
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 180
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 181 ST-AVDIWSLGC 191
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICIN 58
Query: 93 KMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQ 149
KML H NV+ F +++ YL +EYC GG ++ D P P A +F Q
Sbjct: 59 KMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+ +
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
APE+ E VD+WS G+ L
Sbjct: 173 VAPELLKRR-EFHAEPVDVWSCGIVL 197
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICIN 58
Query: 93 KMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQ 149
KML H NV+ F +++ YL +EYC GG ++ D P P A +F Q
Sbjct: 59 KMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+ +
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
APE+ E VD+WS G+ L
Sbjct: 173 VAPELLKRR-EFHAEPVDVWSCGIVL 197
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 69
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 70 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T T + ++APEI G
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 185
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 186 ST-AVDIWSLGC 196
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 100/194 (51%), Gaps = 13/194 (6%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LGEG+YG+V+ ++ T AVKI K+ P N+ +EI + KML H NV+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKMLNHENVVK-- 67
Query: 105 DVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
F +++ YL +EYC GG ++ D P P A +F QL+ G+ YLH G
Sbjct: 68 --FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
I H+DIKP NLLL LKISDFG+A + + G+ + APE+ E
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EF 182
Query: 222 SGYKVDIWSSGVTL 235
VD+WS G+ L
Sbjct: 183 HAEPVDVWSCGIVL 196
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 72
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 73 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T T + ++APEI G
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 188
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 189 ST-AVDIWSLGC 199
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 103 bits (257), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 17/197 (8%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G++GKV + + ET A K+ K + + + + +D +L H N++ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEID----ILASCDHPNIVKLL 100
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIH 164
D F + +++++E+C GG D + + Q Q LD L YLH IIH
Sbjct: 101 DAFYYE--NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 165 KDIKPGNLLLTLDGTLKISDFGV-AESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
+D+K GN+L TLDG +K++DFGV A++ D G+P + APE+ + E S
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI---GTPYWMAPEVV--MCETSK 213
Query: 224 -----YKVDIWSSGVTL 235
YK D+WS G+TL
Sbjct: 214 DRPYDYKADVWSLGITL 230
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 103 bits (257), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 105/208 (50%), Gaps = 13/208 (6%)
Query: 31 IKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+ V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI
Sbjct: 1 MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEIC 57
Query: 91 LLKMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYF 147
+ KML H NV+ F +++ YL +EYC GG ++ D P P A +F
Sbjct: 58 INKMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFF 111
Query: 148 LQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSP 207
QL+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 208 VFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ E VD+WS G+ L
Sbjct: 172 PYVAPELLKRR-EFHAEPVDVWSCGIVL 198
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 105/191 (54%), Gaps = 13/191 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 72
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 73 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T T + ++APEI G
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGXKYY 188
Query: 222 SGYKVDIWSSG 232
S VDIWS G
Sbjct: 189 ST-AVDIWSLG 198
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICIN 58
Query: 93 KMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQ 149
KML H NV+ F +++ YL +EYC GG ++ D P P A +F Q
Sbjct: 59 KMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+ +
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
APE+ E VD+WS G+ L
Sbjct: 173 VAPELLKRR-EFHAEPVDVWSCGIVL 197
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + +++ + + +P+ I REI LLK L H N++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 65
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 66 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T T + ++APEI G
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 181
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 182 ST-AVDIWSLGC 192
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + +++ + + +P+ I REI LLK L H N++
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 64
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 65 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T T + ++APEI G
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYY 180
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 181 ST-AVDIWSLGC 191
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 110/201 (54%), Gaps = 11/201 (5%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
IG Y + +G+G++ KVK T AVKI K +L + + RE+R++K+L
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN--SSSLQKLFREVRIMKVL 70
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H N++ L +V +K +YL+MEY GG ++ D + + +A F Q++ +
Sbjct: 71 NHPNIVKLFEVIETEKT--LYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
+Y H + I+H+D+K NLLL D +KI+DFG + + F + + G+P + APE+
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDAFCGAPPYAAPEL 183
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
G + G +VD+WS GV L
Sbjct: 184 FQG-KKYDGPEVDVWSLGVIL 203
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 110/201 (54%), Gaps = 11/201 (5%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
IG Y + +G+G++ KVK T AV+I K +L + + RE+R++K+L
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLN--SSSLQKLFREVRIMKVL 70
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H N++ L +V +K +YL+MEY GG ++ D + + +A F Q++ +
Sbjct: 71 NHPNIVKLFEVIETEKT--LYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
+Y H + I+H+D+K NLLL D +KI+DFG + + F + + GSP + APE+
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDEFCGSPPYAAPEL 183
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
G + G +VD+WS GV L
Sbjct: 184 FQG-KKYDGPEVDVWSLGVIL 203
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 31 IKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+ V + + + LGEG+YG+V+ ++ T AVKI K+ P N+ +EI
Sbjct: 1 MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEIC 57
Query: 91 LLKMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYF 147
+ ML H NV+ F +++ YL +EYC GG ++ D P P A +F
Sbjct: 58 INAMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFF 111
Query: 148 LQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSP 207
QL+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 208 VFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ E VD+WS G+ L
Sbjct: 172 PYVAPELLKRR-EFHAEPVDVWSCGIVL 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 65
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 66 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 181
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 182 ST-AVDIWSLGC 192
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 65
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 66 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 181
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 182 ST-AVDIWSLGC 192
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 66
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 67 KLLDVI--HTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 182
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 183 ST-AVDIWSLGC 193
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 64
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 65 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 180
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 181 ST-AVDIWSLGC 191
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 66
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 67 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 182
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 183 ST-AVDIWSLGC 193
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 65
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 66 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 181
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 182 ST-AVDIWSLGC 192
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 65
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 66 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 181
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 182 ST-AVDIWSLGC 192
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 68
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 69 KLLDVI--HTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 184
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 185 ST-AVDIWSLGC 195
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 66
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 67 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 182
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 183 ST-AVDIWSLGC 193
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 66
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 67 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 182
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 183 ST-AVDIWSLGC 193
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 69
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 70 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 185
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 186 ST-AVDIWSLGC 196
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 64
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 65 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 180
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 181 ST-AVDIWSLGC 191
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 67
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 68 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 183
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 184 ST-AVDIWSLGC 194
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 67
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 68 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 183
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 184 ST-AVDIWSLGC 194
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 68
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 69 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 184
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 185 ST-AVDIWSLGC 195
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 67
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 68 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 183
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 184 ST-AVDIWSLGC 194
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 68
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 69 KLLDVI--HTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 184
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 185 ST-AVDIWSLGC 195
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 68
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 69 KLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 184
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 185 ST-AVDIWSLGC 195
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 45 LGEGSYG---KVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+GEG+YG K + L E + + +++ + + +P+ I REI LLK L H N++
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAI---REISLLKELNHPNIV 68
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+DV + K+YL+ E+ L+ +D++ P+ Y QLL GL + HS
Sbjct: 69 KLLDVI--HTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++H+D+KP NLL+ +G +K++DFG+A + + + T + ++APEI G
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCKYY 184
Query: 222 SGYKVDIWSSGV 233
S VDIWS G
Sbjct: 185 ST-AVDIWSLGC 195
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 103/206 (50%), Gaps = 13/206 (6%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
V + + + LGEG+ G+V+ ++ T AVKI K+ P N+ +EI +
Sbjct: 2 VPFVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICIN 58
Query: 93 KMLQHRNVIGLVDVFVNDKKQK--MYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQ 149
KML H NV+ F +++ YL +EYC GG ++ D P P A +F Q
Sbjct: 59 KMLNHENVVK----FYGHRREGNIQYLFLEYCSGG--ELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L+ G+ YLH GI H+DIKP NLLL LKISDFG+A + + G+ +
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
APE+ E VD+WS G+ L
Sbjct: 173 VAPELLKRR-EFHAEPVDVWSCGIVL 197
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
++ LG G++G V + + + R +K K + Q +P +I + EI +LK L H
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ-VPMEQI--EAEIEVLKSLDHP 80
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFL----QLLD 152
N+I + +VF + MY++ME C GG L+ ++ + K + GY Q+++
Sbjct: 81 NIIKIFEVF--EDYHNMYIVMETCEGGELLERIVSAQARGK---ALSEGYVAELMKQMMN 135
Query: 153 GLEYLHSQGIIHKDIKPGNLLL---TLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y HSQ ++HKD+KP N+L + +KI DFG+AE +F D+ T + G+ ++
Sbjct: 136 ALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE---LFKSDEHSTNAAGTALY 192
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
APE+ +K DIWS+GV +
Sbjct: 193 MAPEV---FKRDVTFKCDIWSAGVVM 215
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 27/205 (13%)
Query: 43 DLLGE-GSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+++GE G +GKV + + ET A K+ K + + + + +D +L H N++
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEID----ILASCDHPNIV 70
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L+D F + +++++E+C GG D + + Q Q LD L YLH
Sbjct: 71 KLLDAFYYE--NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 128
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ------GSPVFQAPEIA 215
IIH+D+K GN+L TLDG +K++DFGV+ +T T Q G+P + APE+
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSAK-------NTRTXIQRRDSFIGTPYWMAPEVV 181
Query: 216 NGLPEISG-----YKVDIWSSGVTL 235
+ E S YK D+WS G+TL
Sbjct: 182 --MCETSKDRPYDYKADVWSLGITL 204
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 19/208 (9%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ----RIPNGEINVDREIRLLK 93
+Y+M LG G+ G+VK + +T + A+KI K+K R + +NV+ EI +LK
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 94 MLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTP-YKKFPIWQAHGYFLQLLD 152
L H +I + + F + Y+++E GG ++ D K+ YF Q+L
Sbjct: 71 KLNHPCIIKIKNFF---DAEDYYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
++YLH GIIH+D+KP N+LL+ D +KI+DFG ++ L + T G+P +
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGTPTY 182
Query: 210 QAPEIANGLPEISGYK--VDIWSSGVTL 235
APE+ + +GY VD WS GV L
Sbjct: 183 LAPEVLVSVG-TAGYNRAVDCWSLGVIL 209
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 108/220 (49%), Gaps = 23/220 (10%)
Query: 25 IYDNKTIKVKMIGKYVMGDL--LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGE 82
Y + K + V DL +G G+YG V +D T + A+K KL R E
Sbjct: 11 FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIK-----KLYRPFQSE 65
Query: 83 I---NVDREIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPY 135
+ RE+RLLK ++H NVIGL+DVF D+ YL+M + L ++ +
Sbjct: 66 LFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK---H 122
Query: 136 KKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFL 195
+K + Q+L GL Y+H+ GIIH+D+KPGNL + D LKI DFG+A D +
Sbjct: 123 EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM 182
Query: 196 HDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+T ++APE+ + VDIWS G +
Sbjct: 183 XGXVVTR-----WYRAPEVILNWMRYTQ-TVDIWSVGCIM 216
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 19/208 (9%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ----RIPNGEINVDREIRLLK 93
+Y+M LG G+ G+VK + +T + A+KI K+K R + +NV+ EI +LK
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 94 MLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTP-YKKFPIWQAHGYFLQLLD 152
L H +I + + F + Y+++E GG ++ D K+ YF Q+L
Sbjct: 71 KLNHPCIIKIKNFF---DAEDYYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
++YLH GIIH+D+KP N+LL+ D +KI+DFG ++ L + T G+P +
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGTPTY 182
Query: 210 QAPEIANGLPEISGYK--VDIWSSGVTL 235
APE+ + +GY VD WS GV L
Sbjct: 183 LAPEVLVSVG-TAGYNRAVDCWSLGVIL 209
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 19/208 (9%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ----RIPNGEINVDREIRLLK 93
+Y+M LG G+ G+VK + +T + A+KI K+K R + +NV+ EI +LK
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 94 MLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTP-YKKFPIWQAHGYFLQLLD 152
L H +I + + F + Y+++E GG ++ D K+ YF Q+L
Sbjct: 71 KLNHPCIIKIKNFF---DAEDYYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
++YLH GIIH+D+KP N+LL+ D +KI+DFG ++ L + T G+P +
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGTPTY 182
Query: 210 QAPEIANGLPEISGYK--VDIWSSGVTL 235
APE+ + +GY VD WS GV L
Sbjct: 183 LAPEVLVSVG-TAGYNRAVDCWSLGVIL 209
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 108/201 (53%), Gaps = 11/201 (5%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
IG Y + +G+G++ KVK T AVKI K +L + + RE+R+ K+L
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS--SSLQKLFREVRIXKVL 70
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H N++ L +V +K +YL+ EY GG ++ D + + +A F Q++ +
Sbjct: 71 NHPNIVKLFEVIETEKT--LYLVXEYASGG--EVFDYLVAHGRXKEKEARAKFRQIVSAV 126
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
+Y H + I+H+D+K NLLL D +KI+DFG + + F + + G+P + APE+
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADXNIKIADFGFS---NEFTFGNKLDAFCGAPPYAAPEL 183
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
G + G +VD+WS GV L
Sbjct: 184 FQG-KKYDGPEVDVWSLGVIL 203
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 19/208 (9%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ----RIPNGEINVDREIRLLK 93
+Y+M LG G+ G+VK + +T + A+KI K+K R + +NV+ EI +LK
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 69
Query: 94 MLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTP-YKKFPIWQAHGYFLQLLD 152
L H +I + + F + Y+++E GG ++ D K+ YF Q+L
Sbjct: 70 KLNHPCIIKIKNFF---DAEDYYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
++YLH GIIH+D+KP N+LL+ D +KI+DFG ++ L + T G+P +
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGTPTY 181
Query: 210 QAPEIANGLPEISGYK--VDIWSSGVTL 235
APE+ + +GY VD WS GV L
Sbjct: 182 LAPEVLVSVG-TAGYNRAVDCWSLGVIL 208
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 102/204 (50%), Gaps = 22/204 (10%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI---NVDREIRLLKML 95
YV +G G+YG V +D + + A+K KL R EI RE+ LLK +
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIK-----KLSRPFQSEIFAKRAYRELLLLKHM 80
Query: 96 QHRNVIGLVDVFVNDKKQK----MYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLL 151
QH NVIGL+DVF + YL+M + LQ ++ KF + Q+L
Sbjct: 81 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGL----KFSEEKIQYLVYQML 136
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
GL+Y+HS G++H+D+KPGNL + D LKI DFG+A D + +T ++A
Sbjct: 137 KGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRA 191
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE+ + VDIWS G +
Sbjct: 192 PEVILSWMHYNQ-TVDIWSVGCIM 214
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 19/208 (9%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ----RIPNGEINVDREIRLLK 93
+Y+M LG G+ G+VK + +T + A+KI K+K R + +NV+ EI +LK
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 76
Query: 94 MLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTP-YKKFPIWQAHGYFLQLLD 152
L H +I + + F + Y+++E GG ++ D K+ YF Q+L
Sbjct: 77 KLNHPCIIKIKNFF---DAEDYYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
++YLH GIIH+D+KP N+LL+ D +KI+DFG ++ L + T G+P +
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGTPTY 188
Query: 210 QAPEIANGLPEISGYK--VDIWSSGVTL 235
APE+ + +GY VD WS GV L
Sbjct: 189 LAPEVLVSV-GTAGYNRAVDCWSLGVIL 215
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y G+ LG G + VK+ + T + A K KK++ + G +++RE+ +LK +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDGLE 155
H NVI L +V+ N K + LI+E GG ++ D K+ + FL Q+L+G+
Sbjct: 73 HPNVITLHEVYEN--KTDVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLHS I H D+KP N++L LD +KI DFG+A +D + G+P F
Sbjct: 129 YLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDF---GNEFKNIFGTPAFV 184
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 185 APEIVNYEP--LGLEADMWSIGV 205
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK K Q I + + R
Sbjct: 26 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKP-FQSIIHAK-RTYR 82
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 137
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 138 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 192
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KXQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 16 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 72
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 127
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 128 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHT-----DDEMT 182
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 215
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KXQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 20 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 76
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 131
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 132 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHT-----DDEMT 186
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 219
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 110/208 (52%), Gaps = 19/208 (9%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ----RIPNGEINVDREIRLLK 93
+Y+M LG G+ G+VK + +T + A++I K+K R + +NV+ EI +LK
Sbjct: 150 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 209
Query: 94 MLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTP-YKKFPIWQAHGYFLQLLD 152
L H +I + + F + Y+++E GG ++ D K+ YF Q+L
Sbjct: 210 KLNHPCIIKIKNFF---DAEDYYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 264
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
++YLH GIIH+D+KP N+LL+ D +KI+DFG ++ L + T G+P +
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGTPTY 321
Query: 210 QAPEIANGLPEISGYK--VDIWSSGVTL 235
APE+ + +GY VD WS GV L
Sbjct: 322 LAPEVLVSVG-TAGYNRAVDCWSLGVIL 348
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 102/204 (50%), Gaps = 22/204 (10%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI---NVDREIRLLKML 95
YV +G G+YG V +D + + A+K KL R EI RE+ LLK +
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIK-----KLSRPFQSEIFAKRAYRELLLLKHM 98
Query: 96 QHRNVIGLVDVFVNDKKQK----MYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLL 151
QH NVIGL+DVF + YL+M + LQ ++ +F + Q+L
Sbjct: 99 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGM----EFSEEKIQYLVYQML 154
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
GL+Y+HS G++H+D+KPGNL + D LKI DFG+A D + +T ++A
Sbjct: 155 KGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRA 209
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE+ + VDIWS G +
Sbjct: 210 PEVILSWMHYNQ-TVDIWSVGCIM 232
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GXVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y MG+ LG G + V++ T A K KK++L G ++RE+ +L+ ++
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDGLE 155
H N+I L D+F N K + LI+E GG ++ D K+ FL Q+LDG+
Sbjct: 67 HPNIITLHDIFEN--KTDVVLILELVSGG--ELFDFLAEKESLTEDEATQFLKQILDGVH 122
Query: 156 YLHSQGIIHKDIKPGNLLL----TLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
YLHS+ I H D+KP N++L + +K+ DFG+A ++ + G+P F A
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA---GNEFKNIFGTPEFVA 179
Query: 212 PEIANGLPEISGYKVDIWSSGV 233
PEI N P G + D+WS GV
Sbjct: 180 PEIVNYEP--LGLEADMWSIGV 199
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 20 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 76
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 131
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 132 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 186
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 219
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y MG+ LG G + V++ T A K KK++L G ++RE+ +L+ ++
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDGLE 155
H N+I L D+F N K + LI+E GG ++ D K+ FL Q+LDG+
Sbjct: 74 HPNIITLHDIFEN--KTDVVLILELVSGG--ELFDFLAEKESLTEDEATQFLKQILDGVH 129
Query: 156 YLHSQGIIHKDIKPGNLLL----TLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
YLHS+ I H D+KP N++L + +K+ DFG+A ++ + G+P F A
Sbjct: 130 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA---GNEFKNIFGTPEFVA 186
Query: 212 PEIANGLPEISGYKVDIWSSGV 233
PEI N P G + D+WS GV
Sbjct: 187 PEIVNYEP--LGLEADMWSIGV 206
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 111/215 (51%), Gaps = 22/215 (10%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIA-NGLPEISGYKVDIWSSGVTL 235
+ ++APEI N + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNAMH--YNQTVDIWSVGCIM 213
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 110/208 (52%), Gaps = 19/208 (9%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ----RIPNGEINVDREIRLLK 93
+Y+M LG G+ G+VK + +T + A++I K+K R + +NV+ EI +LK
Sbjct: 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 195
Query: 94 MLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTP-YKKFPIWQAHGYFLQLLD 152
L H +I + + F + Y+++E GG ++ D K+ YF Q+L
Sbjct: 196 KLNHPCIIKIKNFF---DAEDYYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 250
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
++YLH GIIH+D+KP N+LL+ D +KI+DFG ++ L + T G+P +
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGTPTY 307
Query: 210 QAPEIANGLPEISGYK--VDIWSSGVTL 235
APE+ + +GY VD WS GV L
Sbjct: 308 LAPEVLVSV-GTAGYNRAVDCWSLGVIL 334
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 21 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 77
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 132
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 187
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 19 NKTI-WEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 75
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 130
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 131 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT-----DDEMT 185
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 218
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 20 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 76
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 131
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 132 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 186
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 219
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 16 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 72
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 127
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 128 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 182
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 215
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 19 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 75
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 130
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 131 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 185
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 218
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y G+ LG G + VK+ + T + A K KK++ + G +++RE+ +LK +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDGLE 155
H NVI L +V+ N K + LI+E GG ++ D K+ + FL Q+L+G+
Sbjct: 73 HPNVITLHEVYEN--KTDVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLHS I H D+KP N++L LD +KI DFG+A +D + G+P F
Sbjct: 129 YLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDF---GNEFKNIFGTPEFV 184
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 185 APEIVNYEP--LGLEADMWSIGV 205
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 11 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 67
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 122
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 123 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 177
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 210
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 10 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 66
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 121
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 176
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 209
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 11 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 67
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 122
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 123 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 177
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 210
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y G+ LG G + VK+ + T + A K KK++ + G +++RE+ +LK +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDGLE 155
H NVI L +V+ N K + LI+E GG ++ D K+ + FL Q+L+G+
Sbjct: 73 HPNVITLHEVYEN--KTDVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLHS I H D+KP N++L LD +KI DFG+A +D + G+P F
Sbjct: 129 YLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDF---GNEFKNIFGTPEFV 184
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 185 APEIVNYEP--LGLEADMWSIGV 205
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 109/214 (50%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ S +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK-----LTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+ DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 12 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 68
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 123
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 124 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 178
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 211
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y MG+ LG G + V++ T A K KK++L G ++RE+ +L+ ++
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDGLE 155
H N+I L D+F N K + LI+E GG ++ D K+ FL Q+LDG+
Sbjct: 88 HPNIITLHDIFEN--KTDVVLILELVSGG--ELFDFLAEKESLTEDEATQFLKQILDGVH 143
Query: 156 YLHSQGIIHKDIKPGNLLL----TLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
YLHS+ I H D+KP N++L + +K+ DFG+A ++ + G+P F A
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA---GNEFKNIFGTPEFVA 200
Query: 212 PEIANGLPEISGYKVDIWSSGV 233
PEI N P G + D+WS GV
Sbjct: 201 PEIVNYEP--LGLEADMWSIGV 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 19 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 75
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 130
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 131 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 185
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 218
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 16 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 72
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 127
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 128 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 182
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 215
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 13 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 69
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 124
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 125 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 179
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 180 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 212
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 20 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAK-RTYR 76
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 131
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 132 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 186
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 219
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 26 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 82
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 137
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 138 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 192
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 225
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 26 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 82
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 137
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 138 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 192
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 19 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 75
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 130
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 131 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT-----DDEMT 185
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 218
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y G+ LG G + VK+ + T + A K KK++ + G +++RE+ +LK +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDGLE 155
H NVI L +V+ N K + LI+E GG ++ D K+ + FL Q+L+G+
Sbjct: 73 HPNVITLHEVYEN--KTDVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLHS I H D+KP N++L LD +KI DFG+A +D + G+P F
Sbjct: 129 YLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDF---GNEFKNIFGTPEFV 184
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 185 APEIVNYEP--LGLEADMWSIGV 205
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 16 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 72
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 127
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 128 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 182
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 215
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 109/195 (55%), Gaps = 13/195 (6%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G++GKV + + ET A K+ + K + + + + EI +L H ++ L+
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV----EIEILATCDHPYIVKLL 82
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIH 164
+ +D K +++++E+C GG D + + Q Q+L+ L +LHS+ IIH
Sbjct: 83 GAYYHDGK--LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 165 KDIKPGNLLLTLDGTLKISDFGV-AESLDMFLHDDTITTSQGSPVFQAPEI--ANGLPEI 221
+D+K GN+L+TL+G ++++DFGV A++L D+ G+P + APE+ + +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTPYWMAPEVVMCETMKDT 197
Query: 222 S-GYKVDIWSSGVTL 235
YK DIWS G+TL
Sbjct: 198 PYDYKADIWSLGITL 212
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 37 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 93
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 148
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 149 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 203
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 204 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 236
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 25 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 81
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 136
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 137 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 191
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 224
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y G+ LG G + VK+ + T + A K KK++ + G +++RE+ +LK +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDGLE 155
H NVI L +V+ N K + LI+E GG ++ D K+ + FL Q+L+G+
Sbjct: 73 HPNVITLHEVYEN--KTDVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLHS I H D+KP N++L LD +KI DFG+A +D + G+P F
Sbjct: 129 YLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDF---GNEFKNIFGTPEFV 184
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 185 APEIVNYEP--LGLEADMWSIGV 205
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 34 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 90
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 145
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 146 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 200
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 201 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 233
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y G+ LG G + VK+ + T + A K KK++ + G +++RE+ +LK +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDGLE 155
H NVI L +V+ N K + LI+E GG ++ D K+ + FL Q+L+G+
Sbjct: 73 HPNVITLHEVYEN--KTDVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLHS I H D+KP N++L LD +KI DFG+A +D + G+P F
Sbjct: 129 YLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDF---GNEFKNIFGTPEFV 184
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 185 APEIVNYEP--LGLEADMWSIGV 205
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 109/195 (55%), Gaps = 13/195 (6%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G++GKV + + ET A K+ + K + + + + EI +L H ++ L+
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV----EIEILATCDHPYIVKLL 74
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIH 164
+ +D K +++++E+C GG D + + Q Q+L+ L +LHS+ IIH
Sbjct: 75 GAYYHDGK--LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 132
Query: 165 KDIKPGNLLLTLDGTLKISDFGV-AESLDMFLHDDTITTSQGSPVFQAPEI--ANGLPEI 221
+D+K GN+L+TL+G ++++DFGV A++L D+ G+P + APE+ + +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTPYWMAPEVVMCETMKDT 189
Query: 222 S-GYKVDIWSSGVTL 235
YK DIWS G+TL
Sbjct: 190 PYDYKADIWSLGITL 204
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y G+ LG G + VK+ + T + A K KK++ + G +++RE+ +LK +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDGLE 155
H NVI L +V+ N K + LI+E GG ++ D K+ + FL Q+L+G+
Sbjct: 73 HPNVITLHEVYEN--KTDVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLHS I H D+KP N++L LD +KI DFG+A +D + G+P F
Sbjct: 129 YLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDF---GNEFKNIFGTPEFV 184
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 185 APEIVNYEP--LGLEADMWSIGV 205
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 33 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 89
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 144
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 145 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 199
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 200 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 232
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y G+ LG G + VK+ + T + A K KK++ + G +++RE+ +LK +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDGLE 155
H NVI L +V+ N K + LI+E GG ++ D K+ + FL Q+L+G+
Sbjct: 73 HPNVITLHEVYEN--KTDVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLHS I H D+KP N++L LD +KI DFG+A +D + G+P F
Sbjct: 129 YLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDF---GNEFKNIFGTPEFV 184
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 185 APEIVNYEP--LGLEADMWSIGV 205
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 25 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 81
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 136
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 137 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT-----DDEMT 191
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 224
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y G+ LG G + VK+ + T + A K KK++ + G +++RE+ +LK +Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDGLE 155
H NVI L +V+ N K + LI+E GG ++ D K+ + FL Q+L+G+
Sbjct: 72 HPNVITLHEVYEN--KTDVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVY 127
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLHS I H D+KP N++L LD +KI DFG+A +D + G+P F
Sbjct: 128 YLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDF---GNEFKNIFGTPEFV 183
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 184 APEIVNYEP--LGLEADMWSIGV 204
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y G+ LG G + VK+ + T + A K KK++ + G +++RE+ +LK +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDGLE 155
H NVI L +V+ N K + LI+E GG ++ D K+ + FL Q+L+G+
Sbjct: 73 HPNVITLHEVYEN--KTDVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLHS I H D+KP N++L LD +KI DFG+A +D + G+P F
Sbjct: 129 YLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDF---GNEFKNIFGTPEFV 184
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 185 APEIVNYEP--LGLEADMWSIGV 205
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y G+ LG G + VK+ + T + A K KK++ + G +++RE+ +LK +Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDGLE 155
H NVI L +V+ N K + LI+E GG ++ D K+ + FL Q+L+G+
Sbjct: 72 HPNVITLHEVYEN--KTDVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVY 127
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLHS I H D+KP N++L LD +KI DFG+A +D + G+P F
Sbjct: 128 YLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDF---GNEFKNIFGTPEFV 183
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 184 APEIVNYEP--LGLEADMWSIGV 204
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y G+ LG G + VK+ + T + A K KK++ + G +++RE+ +LK +Q
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDGLE 155
H NVI L +V+ N K + LI+E GG ++ D K+ + FL Q+L+G+
Sbjct: 73 HPNVITLHEVYEN--KTDVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLHS I H D+KP N++L LD +KI DFG+A +D + G+P F
Sbjct: 129 YLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDF---GNEFKNIFGTPEFV 184
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 185 APEIVNYEP--LGLEADMWSIGV 205
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 10 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAK-RTYR 66
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 121
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 176
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 209
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 96.7 bits (239), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 34 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAK-RTYR 90
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 145
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 146 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 200
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 201 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 233
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 96.7 bits (239), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 33 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAK-RTYR 89
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 144
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 145 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 199
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 200 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 232
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 102/197 (51%), Gaps = 19/197 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+G G+YG V D++T R AVK + Q I + + RE+RLLK ++H NVIGL+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAK-RTYRELRLLKHMKHENVIGLL 83
Query: 105 DVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL--QLLDGLEYLH 158
DVF + +YL+ L +++ K + H FL Q+L GL+Y+H
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCAKLTDDHVQFLIYQILRGLKYIH 138
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGL 218
S IIH+D+KP NL + D LKI DFG+A DD +T + ++APEI
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMTGYVATRWYRAPEIMLNW 193
Query: 219 PEISGYKVDIWSSGVTL 235
+ VDIWS G +
Sbjct: 194 MHYNQ-TVDIWSVGCIM 209
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 24 NKTI-WEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAK-RTYR 80
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 135
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 136 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 190
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 191 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 223
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y G+ LG G + VK+ + T + A K KK++ + G +++RE+ +LK +Q
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDGLE 155
H NVI L +V+ N K + LI+E GG ++ D K+ + FL Q+L+G+
Sbjct: 73 HPNVITLHEVYEN--KTDVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLHS I H D+KP N++L LD +KI DFG+A +D + G+P F
Sbjct: 129 YLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDF---GNEFKNIFGTPEFV 184
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 185 APEIVNYEP--LGLEADMWSIGV 205
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEIN-VDREIRLLKM 94
I + +G+LLG+GS+ V T A+K+ KK + + G + V E+++
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKA--GMVQRVQNEVKIHCQ 67
Query: 95 LQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGL 154
L+H +++ L + F + +YL++E C G + K F +A + Q++ G+
Sbjct: 68 LKHPSILELYNYF--EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM 125
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
YLHS GI+H+D+ NLLLT + +KI+DFG+A L M H+ T G+P + +PEI
Sbjct: 126 LYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM-PHEKHYTLC-GTPNYISPEI 183
Query: 215 ANGLPEISGYKVDIWSSGV 233
A G + D+WS G
Sbjct: 184 ATR--SAHGLESDVWSLGC 200
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI D+G+A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 102/201 (50%), Gaps = 25/201 (12%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGE----INVDREIRLLKMLQ---H 97
+G G+YG V + D + F K R+PNGE I+ RE+ LL+ L+ H
Sbjct: 12 IGVGAYGTVYKARDPHS------GHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 98 RNVIGLVDVFVN---DKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGL 154
NV+ L+DV D++ K+ L+ E+ L+ LD P P Q L GL
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAE--SLDMFLHDDTITTSQGSPVFQAP 212
++LH+ I+H+D+KP N+L+T GT+K++DFG+A S M L +T ++AP
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLW-----YRAP 180
Query: 213 EIANGLPEISGYKVDIWSSGV 233
E+ L VD+WS G
Sbjct: 181 EVL--LQSTYATPVDMWSVGC 199
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 16/195 (8%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG G+YG+V D T RA+KI +K + N ++ E+ +LK+L H N++ L
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL--EEVAVLKLLDHPNIMKLY 102
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYK-KFPIWQAHGYFLQLLDGLEYLHSQGII 163
D F + K+ YL+ME GG ++ D ++ KF A Q+L G+ YLH I+
Sbjct: 103 DFF--EDKRNYYLVMECYKGG--ELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIV 158
Query: 164 HKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPE 220
H+D+KP NLLL D +KI DFG++ +F + + G+ + APE+ L +
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSA---VFENQKKMKERLGTAYYIAPEV---LRK 212
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS GV L
Sbjct: 213 KYDEKCDVWSIGVIL 227
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 102/201 (50%), Gaps = 25/201 (12%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGE----INVDREIRLLKMLQ---H 97
+G G+YG V + D + F K R+PNGE I+ RE+ LL+ L+ H
Sbjct: 12 IGVGAYGTVYKARDPHS------GHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 98 RNVIGLVDVFVN---DKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGL 154
NV+ L+DV D++ K+ L+ E+ L+ LD P P Q L GL
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAE--SLDMFLHDDTITTSQGSPVFQAP 212
++LH+ I+H+D+KP N+L+T GT+K++DFG+A S M L +T ++AP
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLW-----YRAP 180
Query: 213 EIANGLPEISGYKVDIWSSGV 233
E+ L VD+WS G
Sbjct: 181 EVL--LQSTYATPVDMWSVGC 199
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 109/214 (50%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 37 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 93
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 148
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +
Sbjct: 149 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMX 203
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 204 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 236
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 109/214 (50%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 34 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAK-RTYR 90
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 145
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +
Sbjct: 146 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMX 200
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 201 GXVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 233
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 109/214 (50%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMA 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GFVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 109/214 (50%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMA 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GFVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 102/201 (50%), Gaps = 25/201 (12%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGE----INVDREIRLLKMLQ---H 97
+G G+YG V + D + F K R+PNGE I+ RE+ LL+ L+ H
Sbjct: 12 IGVGAYGTVYKARDPHS------GHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 98 RNVIGLVDVFVN---DKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGL 154
NV+ L+DV D++ K+ L+ E+ L+ LD P P Q L GL
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAE--SLDMFLHDDTITTSQGSPVFQAP 212
++LH+ I+H+D+KP N+L+T GT+K++DFG+A S M L +T ++AP
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLW-----YRAP 180
Query: 213 EIANGLPEISGYKVDIWSSGV 233
E+ L VD+WS G
Sbjct: 181 EVL--LQSTYATPVDMWSVGC 199
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 109/214 (50%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 21 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 77
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 132
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A D +T
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----ADEMT 187
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 220
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y G+ LG G + VK+ + T + A K KK++ + G +++RE+ +LK +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDGLE 155
H NVI L +V+ N K + LI E GG ++ D K+ + FL Q+L+G+
Sbjct: 73 HPNVITLHEVYEN--KTDVILIGELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLHS I H D+KP N++L LD +KI DFG+A +D + G+P F
Sbjct: 129 YLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDF---GNEFKNIFGTPEFV 184
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 185 APEIVNYEP--LGLEADMWSIGV 205
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 109/214 (50%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 10 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAK-RTYR 66
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 121
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMA 176
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 177 GFVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 209
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 109/214 (50%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 21 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 77
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 132
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A D +T
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----ADEMT 187
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 109/214 (50%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 21 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 77
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 132
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A D +T
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----ADEMT 187
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 109/214 (50%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI FG+A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 109/214 (50%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI D G+A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 110/202 (54%), Gaps = 20/202 (9%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKK----KKLQRIPNGEINVDREIRLLK 93
KY L+GEGSYG V + + +T A+K F + K +++I REI+LLK
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAM------REIKLLK 79
Query: 94 MLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDG 153
L+H N++ L++V KK++ YL+ E+ + D L+ P Y Q+++G
Sbjct: 80 QLRHENLVNLLEV--CKKKKRWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIING 136
Query: 154 LEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDM--FLHDDTITTSQGSPVFQA 211
+ + HS IIH+DIKP N+L++ G +K+ DFG A +L ++DD + T ++A
Sbjct: 137 IGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRW----YRA 192
Query: 212 PEIANGLPEISGYKVDIWSSGV 233
PE+ G + G VD+W+ G
Sbjct: 193 PELLVGDVKY-GKAVDVWAIGC 213
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 109/214 (50%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DF +A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 101/200 (50%), Gaps = 25/200 (12%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR---EIRLLKMLQHRNVI 101
+G G+YG V D+ + AVK KL R I+ R E+RLLK L+H NVI
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK-----KLSRPFQSLIHARRTYRELRLLKHLKHENVI 90
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL--QLLDGLE 155
GL+DVF ++YL+ L +++ S + H FL QLL GL+
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQA-----LSDEHVQFLVYQLLRGLK 145
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIA 215
Y+HS GIIH+D+KP N+ + D L+I DFG+A D+ +T + ++APEI
Sbjct: 146 YIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA-----DEEMTGYVATRWYRAPEIM 200
Query: 216 NGLPEISGYKVDIWSSGVTL 235
+ VDIWS G +
Sbjct: 201 LNWMHYNQ-TVDIWSVGCIM 219
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 109/214 (50%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI D G+A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y +G+ LG G + VK+ + T A K KK++ + G ++RE+ +L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDGLE 155
H NVI L DV+ N + + LI+E GG ++ D K+ +A + Q+LDG+
Sbjct: 74 HHNVITLHDVYEN--RTDVVLILELVSGG--ELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLH++ I H D+KP N++L LD +K+ DFG+A ++ + I G+P F
Sbjct: 130 YLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFV 185
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 186 APEIVNYEP--LGLEADMWSIGV 206
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y +G+ LG G + VK+ + T A K KK++ + G ++RE+ +L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDGLE 155
H NVI L DV+ N + + LI+E GG ++ D K+ +A + Q+LDG+
Sbjct: 74 HHNVITLHDVYEN--RTDVVLILELVSGG--ELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLH++ I H D+KP N++L LD +K+ DFG+A ++ + I G+P F
Sbjct: 130 YLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFV 185
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 186 APEIVNYEP--LGLEADMWSIGV 206
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y +G+ LG G + VK+ + T A K KK++ + G ++RE+ +L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDGLE 155
H NVI L DV+ N + + LI+E GG ++ D K+ +A + Q+LDG+
Sbjct: 74 HHNVITLHDVYEN--RTDVVLILELVSGG--ELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLH++ I H D+KP N++L LD +K+ DFG+A ++ + I G+P F
Sbjct: 130 YLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFV 185
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 186 APEIVNYEP--LGLEADMWSIGV 206
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y +G+ LG G + VK+ + T A K KK++ + G ++RE+ +L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDGLE 155
H NVI L DV+ N + + LI+E GG ++ D K+ +A + Q+LDG+
Sbjct: 74 HHNVITLHDVYEN--RTDVVLILELVSGG--ELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLH++ I H D+KP N++L LD +K+ DFG+A ++ + I G+P F
Sbjct: 130 YLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFV 185
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 186 APEIVNYEP--LGLEADMWSIGV 206
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y +G+ LG G + VK+ + T A K KK++ + G ++RE+ +L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDGLE 155
H NVI L DV+ N + + LI+E GG ++ D K+ +A + Q+LDG+
Sbjct: 74 HHNVITLHDVYEN--RTDVVLILELVSGG--ELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLH++ I H D+KP N++L LD +K+ DFG+A ++ + I G+P F
Sbjct: 130 YLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFV 185
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 186 APEIVNYEP--LGLEADMWSIGV 206
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 101/201 (50%), Gaps = 24/201 (11%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGE----INVDREIRLLKMLQ---H 97
+GEG+YGKV + D + R F K R+ GE ++ RE+ +L+ L+ H
Sbjct: 19 IGEGAYGKVFKARDLKNGGR-----FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 98 RNVIGLVDVFV---NDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGL 154
NV+ L DV D++ K+ L+ E+ L LD P P QLL GL
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAE--SLDMFLHDDTITTSQGSPVFQAP 212
++LHS ++H+D+KP N+L+T G +K++DFG+A S M L +T ++AP
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW-----YRAP 188
Query: 213 EIANGLPEISGYKVDIWSSGV 233
E+ L VD+WS G
Sbjct: 189 EVL--LQSSYATPVDLWSVGC 207
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 101/201 (50%), Gaps = 24/201 (11%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGE----INVDREIRLLKMLQ---H 97
+GEG+YGKV + D + R F K R+ GE ++ RE+ +L+ L+ H
Sbjct: 19 IGEGAYGKVFKARDLKNGGR-----FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 98 RNVIGLVDVFV---NDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGL 154
NV+ L DV D++ K+ L+ E+ L LD P P QLL GL
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAE--SLDMFLHDDTITTSQGSPVFQAP 212
++LHS ++H+D+KP N+L+T G +K++DFG+A S M L +T ++AP
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL-----WYRAP 188
Query: 213 EIANGLPEISGYKVDIWSSGV 233
E+ L VD+WS G
Sbjct: 189 EVL--LQSSYATPVDLWSVGC 207
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 101/201 (50%), Gaps = 24/201 (11%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGE----INVDREIRLLKMLQ---H 97
+GEG+YGKV + D + R F K R+ GE ++ RE+ +L+ L+ H
Sbjct: 19 IGEGAYGKVFKARDLKNGGR-----FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 98 RNVIGLVDVFV---NDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGL 154
NV+ L DV D++ K+ L+ E+ L LD P P QLL GL
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAE--SLDMFLHDDTITTSQGSPVFQAP 212
++LHS ++H+D+KP N+L+T G +K++DFG+A S M L +T ++AP
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW-----YRAP 188
Query: 213 EIANGLPEISGYKVDIWSSGV 233
E+ L VD+WS G
Sbjct: 189 EVL--LQSSYATPVDLWSVGC 207
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K++ H+N+I
Sbjct: 32 IGSGAQGIVVAAYDA--ILERNVAI---KKLSRPFQNQTHAKRAYRELVLMKVVNHKNII 86
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGLQDM----LDSTPYKKFPIWQAHGYFL-QLLD 152
GL++VF K Q +Y++ME L + LD + Y L Q+L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH---------ERMSYLLYQMLV 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR----YYRA 193
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS GV +
Sbjct: 194 PEVILGM----GYKENVDIWSVGVIM 215
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 109/214 (50%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D++T R AVK + Q I + + R
Sbjct: 14 NKTI-WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAK-RTYR 70
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF + +YL+ L +++ K +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 125
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI D G+A DD +T
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHT-----DDEMT 180
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQ-TVDIWSVGCIM 213
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K++ H+N+I
Sbjct: 32 IGSGAQGIVCAAYDA--ILERNVAI---KKLSRPFQNQTHAKRAYRELVLMKVVNHKNII 86
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGLQDM----LDSTPYKKFPIWQAHGYFL-QLLD 152
GL++VF K Q +Y++ME L + LD + Y L Q+L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH---------ERMSYLLYQMLV 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR----YYRA 193
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS GV +
Sbjct: 194 PEVILGM----GYKENVDIWSVGVIM 215
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 101/200 (50%), Gaps = 25/200 (12%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR---EIRLLKMLQHRNVI 101
+G G+YG V D+ + AVK KL R I+ R E+RLLK L+H NVI
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK-----KLSRPFQSLIHARRTYRELRLLKHLKHENVI 90
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL--QLLDGLE 155
GL+DVF ++YL+ L +++ K + H FL QLL GL+
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV-----KCQALSDEHVQFLVYQLLRGLK 145
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIA 215
Y+HS GIIH+D+KP N+ + D L+I DFG+A D+ +T + ++APEI
Sbjct: 146 YIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA-----DEEMTGYVATRWYRAPEIM 200
Query: 216 NGLPEISGYKVDIWSSGVTL 235
+ VDIWS G +
Sbjct: 201 LNWMHYNQ-TVDIWSVGCIM 219
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 100/195 (51%), Gaps = 15/195 (7%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG G+YG+V D T RA+KI KK + N +D E+ +LK L H N++ L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLD-EVAVLKQLDHPNIMKLY 70
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYK-KFPIWQAHGYFLQLLDGLEYLHSQGII 163
+ F + K+ YL+ME GG ++ D + KF A Q+L G YLH I+
Sbjct: 71 EFF--EDKRNYYLVMEVYRGG--ELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIV 126
Query: 164 HKDIKPGNLLL---TLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPE 220
H+D+KP NLLL + D +KI DFG++ ++ + G+ + APE+ L +
Sbjct: 127 HRDLKPENLLLESKSRDALIKIVDFGLSAHFEV---GGKMKERLGTAYYIAPEV---LRK 180
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS GV L
Sbjct: 181 KYDEKCDVWSCGVIL 195
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 109/200 (54%), Gaps = 16/200 (8%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKL----QRIPNGEINVDREIRLLK 93
KY + +GEG+YG V + + ET + K+ +L + +P+ + REI LLK
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRET---HEIVALKRVRLDDDDEGVPSSAL---REICLLK 56
Query: 94 MLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDG 153
L+H+N++ L DV +DKK + L+ E+C L+ DS P + QLL G
Sbjct: 57 ELKHKNIVRLHDVLHSDKK--LTLVFEFCDQDLKKYFDSCNGDLDPEI-VKSFLFQLLKG 113
Query: 154 LEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
L + HS+ ++H+D+KP NLL+ +G LK++DFG+A + + + + + ++ P+
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR--CYSAEVVTLWYRPPD 171
Query: 214 IANGLPEISGYKVDIWSSGV 233
+ G ++ +D+WS+G
Sbjct: 172 VLFGA-KLYSTSIDMWSAGC 190
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 103/205 (50%), Gaps = 25/205 (12%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDR-------EIRLLKML 95
LG G+YG+V + +A+K+ KK + R + N+++ EI LLK L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQLLDG 153
H N+I L DVF + K+ YL+ E+ GG + +++ KF A Q+L G
Sbjct: 104 DHPNIIKLFDVF--EDKKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSG 158
Query: 154 LEYLHSQGIIHKDIKPGNLLLTLDGTL---KISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
+ YLH I+H+DIKP N+LL +L KI DFG++ F D + G+ +
Sbjct: 159 ICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS---SFFSKDYKLRDRLGTAYYI 215
Query: 211 APEIANGLPEISGYKVDIWSSGVTL 235
APE+ L + K D+WS GV +
Sbjct: 216 APEV---LKKKYNEKCDVWSCGVIM 237
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG--EINVDREIRLLKMLQ 96
Y +G+ LG G + VK+ + T A K KK++ + G ++RE+ +L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDGLE 155
H N+I L DV+ N + + LI+E GG ++ D K+ +A + Q+LDG+
Sbjct: 74 HPNIITLHDVYEN--RTDVVLILELVSGG--ELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT-----LKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
YLH++ I H D+KP N++L LD +K+ DFG+A ++ + I G+P F
Sbjct: 130 YLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFV 185
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APEI N P G + D+WS GV
Sbjct: 186 APEIVNYEP--LGLEADMWSIGV 206
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 101/200 (50%), Gaps = 25/200 (12%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR---EIRLLKMLQHRNVI 101
+G G+YG V D+ + AVK KL R I+ R E+RLLK L+H NVI
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVK-----KLSRPFQSLIHARRTYRELRLLKHLKHENVI 82
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL--QLLDGLE 155
GL+DVF ++YL+ L +++ K + H FL QLL GL+
Sbjct: 83 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV-----KCQALSDEHVQFLVYQLLRGLK 137
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIA 215
Y+HS GIIH+D+KP N+ + D L+I DFG+A D+ +T + ++APEI
Sbjct: 138 YIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA-----DEEMTGYVATRWYRAPEIM 192
Query: 216 NGLPEISGYKVDIWSSGVTL 235
+ VDIWS G +
Sbjct: 193 LNWMHYNQ-TVDIWSVGCIM 211
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 100/195 (51%), Gaps = 15/195 (7%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG G+YG+V D T RA+KI KK + N +D E+ +LK L H N++ L
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLD-EVAVLKQLDHPNIMKLY 87
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYK-KFPIWQAHGYFLQLLDGLEYLHSQGII 163
+ F + K+ YL+ME GG ++ D + KF A Q+L G YLH I+
Sbjct: 88 EFF--EDKRNYYLVMEVYRGG--ELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIV 143
Query: 164 HKDIKPGNLLL---TLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPE 220
H+D+KP NLLL + D +KI DFG++ ++ + G+ + APE+ L +
Sbjct: 144 HRDLKPENLLLESKSRDALIKIVDFGLSAHFEV---GGKMKERLGTAYYIAPEV---LRK 197
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS GV L
Sbjct: 198 KYDEKCDVWSCGVIL 212
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 38 KYVMGDLLGEGSYGK---VKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKM 94
KYV +GEGS+GK VK D + + I + +R + RE+ +L
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREES-----RREVAVLAN 79
Query: 95 LQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHG---YFLQLL 151
++H N++ + F ++ +Y++M+YC GG D+ +K ++Q +F+Q+
Sbjct: 80 MKHPNIVQYRESF--EENGSLYIVMDYCEGG--DLFKRINAQKGVLFQEDQILDWFVQIC 135
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
L+++H + I+H+DIK N+ LT DGT+++ DFG+A L+ + + G+P + +
Sbjct: 136 LALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV--ELARACIGTPYYLS 193
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PEI P K DIW+ G L
Sbjct: 194 PEICENKP--YNNKSDIWALGCVL 215
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
NKTI ++ +Y +G G+YG V D ++ + AVK + Q I + + R
Sbjct: 43 NKTI-WEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRP-FQSIIHAK-RTYR 99
Query: 88 EIRLLKMLQHRNVIGLVDVFVN----DKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
E+RLLK ++H NVIGL+DVF ++ +YL+ L +++ K +
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 154
Query: 144 HGYFL--QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
H FL Q+L GL+Y+HS IIH+D+KP NL + D LKI DFG+A DD +T
Sbjct: 155 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-----DDEMT 209
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ ++APEI + VDIWS G +
Sbjct: 210 GYVATRWYRAPEIMLNWMHYN-MTVDIWSVGCIM 242
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 111/207 (53%), Gaps = 31/207 (14%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDS--ETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
KY + +GEG+YG V + ++ ET + +++ +K+ + IP+ I REI +LK L
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRL--EKEDEGIPSTTI---REISILKEL 57
Query: 96 QHRNVIGLVDVFVNDKK---------QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
+H N++ L DV K+ Q + +++ C GGL+ + A +
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV------------TAKSF 105
Query: 147 FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS 206
LQLL+G+ Y H + ++H+D+KP NLL+ +G LKI+DFG+A + + + T +
Sbjct: 106 LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK--YTHEVVT 163
Query: 207 PVFQAPEIANGLPEISGYKVDIWSSGV 233
++AP++ G + S +DIWS G
Sbjct: 164 LWYRAPDVLMGSKKYST-TIDIWSVGC 189
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 111/207 (53%), Gaps = 31/207 (14%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDS--ETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
KY + +GEG+YG V + ++ ET + +++ +K+ + IP+ I REI +LK L
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRL--EKEDEGIPSTTI---REISILKEL 57
Query: 96 QHRNVIGLVDVFVNDKK---------QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
+H N++ L DV K+ Q + +++ C GGL+ + A +
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV------------TAKSF 105
Query: 147 FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS 206
LQLL+G+ Y H + ++H+D+KP NLL+ +G LKI+DFG+A + + + T +
Sbjct: 106 LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK--YTHEVVT 163
Query: 207 PVFQAPEIANGLPEISGYKVDIWSSGV 233
++AP++ G + S +DIWS G
Sbjct: 164 LWYRAPDVLMGSKKYST-TIDIWSVGC 189
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 39/234 (16%)
Query: 9 DGDMISIFHRVDSDQVIYDNKTIKVKMIGKYVMGDLLGEGSYGKV---KEMLDSETLCRR 65
D D+ +F + D +++ D + I G GS+G V +++ +SE + +
Sbjct: 1 DPDVAELFFKDDPEKLFSDLREI--------------GHGSFGAVYFARDVRNSEVVAIK 46
Query: 66 AVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG 125
+ K+ ++ + + +E+R L+ L+H N I ++ ++ +L+MEYC+G
Sbjct: 47 KMSYSGKQSNEKWQD----IIKEVRFLQKLRHPNTIQYRGCYL--REHTAWLVMEYCLGS 100
Query: 126 LQDMLD--STPYKKFPIWQ-AHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKI 182
D+L+ P ++ I HG L GL YLHS +IH+D+K GN+LL+ G +K+
Sbjct: 101 ASDLLEVHKKPLQEVEIAAVTHG----ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL 156
Query: 183 SDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISGY--KVDIWSSGVT 234
DFG A + G+P + APE+ + E Y KVD+WS G+T
Sbjct: 157 GDFGSASIM------APANXFVGTPYWMAPEVILAMDE-GQYDGKVDVWSLGIT 203
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 112/209 (53%), Gaps = 35/209 (16%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDS--ETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
KY + +GEG+YG V + ++ ET + +++ +K+ + IP+ I REI +LK L
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRL--EKEDEGIPSTTI---REISILKEL 57
Query: 96 QHRNVIGLVDVFVNDKK---------QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
+H N++ L DV K+ Q + +++ C GGL+ + A +
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV------------TAKSF 105
Query: 147 FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQ 204
LQLL+G+ Y H + ++H+D+KP NLL+ +G LKI+DFG+A + + + T I T
Sbjct: 106 LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLW 165
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGV 233
++AP++ G + S +DIWS G
Sbjct: 166 ----YRAPDVLMGSKKYST-TIDIWSVGC 189
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 39/234 (16%)
Query: 9 DGDMISIFHRVDSDQVIYDNKTIKVKMIGKYVMGDLLGEGSYGKV---KEMLDSETLCRR 65
D D+ +F + D +++ D + I G GS+G V +++ +SE + +
Sbjct: 40 DPDVAELFFKDDPEKLFSDLREI--------------GHGSFGAVYFARDVRNSEVVAIK 85
Query: 66 AVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG 125
+ K+ ++ + + +E+R L+ L+H N I ++ ++ +L+MEYC+G
Sbjct: 86 KMSYSGKQSNEKWQD----IIKEVRFLQKLRHPNTIQYRGCYL--REHTAWLVMEYCLGS 139
Query: 126 LQDMLD--STPYKKFPIWQ-AHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKI 182
D+L+ P ++ I HG L GL YLHS +IH+D+K GN+LL+ G +K+
Sbjct: 140 ASDLLEVHKKPLQEVEIAAVTHG----ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL 195
Query: 183 SDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISGY--KVDIWSSGVT 234
DFG A + G+P + APE+ + E Y KVD+WS G+T
Sbjct: 196 GDFGSASIM------APANXFVGTPYWMAPEVILAMDE-GQYDGKVDVWSLGIT 242
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 107/206 (51%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K++ H+N+I
Sbjct: 32 IGSGAQGIVCAAYDA--ILERNVAI---KKLSRPFQNQTHAKRAYRELVLMKVVNHKNII 86
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGLQDM----LDSTPYKKFPIWQAHGYFL-QLLD 152
GL++VF K Q +Y++ME L + LD + Y L Q+L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH---------ERMSYLLYQMLC 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR----YYRA 193
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 194 PEVILGM----GYKENVDIWSVGCIM 215
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 109/202 (53%), Gaps = 15/202 (7%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +LG+GS+G+V D T AVK+ K+++++ + E ++ RE++LLK L H
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLREVQLLKQLDH 85
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDST-PYKKFPIWQAHGYFLQLLDGLEY 156
N++ L + F + K YL+ E GG ++ D K+F A Q+L G+ Y
Sbjct: 86 PNIMKLYEFF--EDKGYFYLVGEVYTGG--ELFDEIISRKRFSEVDAARIIRQVLSGITY 141
Query: 157 LHSQGIIHKDIKPGNLLL---TLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
+H I+H+D+KP NLLL + D ++I DFG++ F + G+ + APE
Sbjct: 142 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH---FEASKKMKDKIGTAYYIAPE 198
Query: 214 IANGLPEISGYKVDIWSSGVTL 235
+ +G + K D+WS+GV L
Sbjct: 199 VLHGTYD---EKCDVWSTGVIL 217
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 100/200 (50%), Gaps = 9/200 (4%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVD--REIRLLKML 95
+Y D LGEG + V + D T A+K K +G IN REI+LL+ L
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDG-INRTALREIKLLQEL 69
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
H N+IGL+D F K + L+ ++ L+ ++ P Y L L GLE
Sbjct: 70 SHPNIIGLLDAF--GHKSNISLVFDFMETDLEVIIKDNSLVLTPS-HIKAYMLMTLQGLE 126
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIA 215
YLH I+H+D+KP NLLL +G LK++DFG+A+S + + ++APE+
Sbjct: 127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS--PNRAYXHQVVTRWYRAPELL 184
Query: 216 NGLPEISGYKVDIWSSGVTL 235
G + G VD+W+ G L
Sbjct: 185 FGA-RMYGVGVDMWAVGCIL 203
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 107/206 (51%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K++ H+N+I
Sbjct: 32 IGSGAQGIVCAAYDA--ILERNVAI---KKLSRPFQNQTHAKRAYRELVLMKVVNHKNII 86
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGLQDM----LDSTPYKKFPIWQAHGYFL-QLLD 152
GL++VF K Q +Y++ME L + LD + Y L Q+L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH---------ERMSYLLYQMLV 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR----YYRA 193
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 194 PEVILGM----GYKENVDIWSVGCIM 215
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 109/200 (54%), Gaps = 16/200 (8%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKL----QRIPNGEINVDREIRLLK 93
KY + +GEG+YG V + + ET + K+ +L + +P+ + REI LLK
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRET---HEIVALKRVRLDDDDEGVPSSAL---REICLLK 56
Query: 94 MLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDG 153
L+H+N++ L DV +DKK + L+ E+C L+ DS P + QLL G
Sbjct: 57 ELKHKNIVRLHDVLHSDKK--LTLVFEFCDQDLKKYFDSCNGDLDPEI-VKSFLFQLLKG 113
Query: 154 LEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
L + HS+ ++H+D+KP NLL+ +G LK+++FG+A + + + + + ++ P+
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR--CYSAEVVTLWYRPPD 171
Query: 214 IANGLPEISGYKVDIWSSGV 233
+ G ++ +D+WS+G
Sbjct: 172 VLFGA-KLYSTSIDMWSAGC 190
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 107/206 (51%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 32 IGSGAQGIVCAAYDA--ILERNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
GL++VF K Q +Y++ME L Q LD + Y L Q+L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + + T ++A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTR----YYRA 193
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 194 PEVILGM----GYKENVDIWSVGCIM 215
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 109/202 (53%), Gaps = 15/202 (7%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +LG+GS+G+V D T AVK+ K+++++ + E ++ RE++LLK L H
Sbjct: 50 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLREVQLLKQLDH 108
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDST-PYKKFPIWQAHGYFLQLLDGLEY 156
N++ L + F + K YL+ E GG ++ D K+F A Q+L G+ Y
Sbjct: 109 PNIMKLYEFF--EDKGYFYLVGEVYTGG--ELFDEIISRKRFSEVDAARIIRQVLSGITY 164
Query: 157 LHSQGIIHKDIKPGNLLL---TLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
+H I+H+D+KP NLLL + D ++I DFG++ F + G+ + APE
Sbjct: 165 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH---FEASKKMKDKIGTAYYIAPE 221
Query: 214 IANGLPEISGYKVDIWSSGVTL 235
+ +G + K D+WS+GV L
Sbjct: 222 VLHGTYD---EKCDVWSTGVIL 240
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 109/202 (53%), Gaps = 15/202 (7%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +LG+GS+G+V D T AVK+ K+++++ + E ++ RE++LLK L H
Sbjct: 51 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLREVQLLKQLDH 109
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDST-PYKKFPIWQAHGYFLQLLDGLEY 156
N++ L + F + K YL+ E GG ++ D K+F A Q+L G+ Y
Sbjct: 110 PNIMKLYEFF--EDKGYFYLVGEVYTGG--ELFDEIISRKRFSEVDAARIIRQVLSGITY 165
Query: 157 LHSQGIIHKDIKPGNLLL---TLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
+H I+H+D+KP NLLL + D ++I DFG++ F + G+ + APE
Sbjct: 166 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH---FEASKKMKDKIGTAYYIAPE 222
Query: 214 IANGLPEISGYKVDIWSSGVTL 235
+ +G + K D+WS+GV L
Sbjct: 223 VLHGTYD---EKCDVWSTGVIL 241
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 106/206 (51%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 32 IGSGAQGIVCAAYDA--ILERNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGLQDM----LDSTPYKKFPIWQAHGYFL-QLLD 152
GL++VF K Q +Y++ME L + LD + Y L Q+L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH---------ERMSYLLYQMLC 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR----YYRA 193
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 194 PEVILGM----GYKENVDIWSVGCIM 215
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 110/205 (53%), Gaps = 24/205 (11%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFK-KKKLQRIPNGEINVDREIRLLKM 94
I +Y LGEG+YG+V + +D+ T A+K + + + + +P I RE+ LLK
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAI---REVSLLKE 89
Query: 95 LQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGL 154
LQHRN+I L V ++ +++LI EY L+ +D P + ++ + QL++G+
Sbjct: 90 LQHRNIIELKSVIHHN--HRLHLIFEYAENDLKKYMDKNPDVSMRVIKS--FLYQLINGV 145
Query: 155 EYLHSQGIIHKDIKPGNLLLTLD-----GTLKISDFGVAESLDM----FLHDDTITTSQG 205
+ HS+ +H+D+KP NLLL++ LKI DFG+A + + F H + IT
Sbjct: 146 NFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTH-EIITL--- 201
Query: 206 SPVFQAPEIANGLPEISGYKVDIWS 230
++ PEI G S VDIWS
Sbjct: 202 --WYRPPEILLGSRHYST-SVDIWS 223
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 16/199 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
Y D+LG G++ +V D T A+K KK L+ E +++ EI +L ++H
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE---GKEGSMENEIAVLHKIKHP 76
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQ-AHGYFLQLLDGLEYL 157
N++ L D++ + +YLIM+ GG ++ D K F + A Q+LD ++YL
Sbjct: 77 NIVALDDIY--ESGGHLYLIMQLVSGG--ELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 158 HSQGIIHKDIKPGNLL---LTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
H GI+H+D+KP NLL L D + ISDFG+++ D ++T+ G+P + APE+
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP---GSVLSTACGTPGYVAPEV 189
Query: 215 ANGLPEISGYKVDIWSSGV 233
P VD WS GV
Sbjct: 190 LAQKPYSKA--VDCWSIGV 206
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 24/204 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR---EIRLLKML 95
Y + + +G GS+G+VK + T RRA K K ++ +VDR EI ++K L
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE-------DVDRFKQEIEIMKSL 63
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDGL 154
H N+I L + F ++ +YL+ME C GG ++ + +K+ F A +L +
Sbjct: 64 DHPNIIRLYETFEDN--TDIYLVMELCTGG--ELFERVVHKRVFRESDAARIMKDVLSAV 119
Query: 155 EYLHSQGIIHKDIKPGNLLL---TLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
Y H + H+D+KP N L + D LK+ DFG+A F + T G+P + +
Sbjct: 120 AYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR---FKPGKMMRTKVGTPYYVS 176
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
P++ GL G + D WS+GV +
Sbjct: 177 PQVLEGL---YGPECDEWSAGVMM 197
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 24/204 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR---EIRLLKML 95
Y + + +G GS+G+VK + T RRA K K ++ +VDR EI ++K L
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE-------DVDRFKQEIEIMKSL 80
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDGL 154
H N+I L + F ++ +YL+ME C GG ++ + +K+ F A +L +
Sbjct: 81 DHPNIIRLYETFEDN--TDIYLVMELCTGG--ELFERVVHKRVFRESDAARIMKDVLSAV 136
Query: 155 EYLHSQGIIHKDIKPGNLLL---TLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
Y H + H+D+KP N L + D LK+ DFG+A F + T G+P + +
Sbjct: 137 AYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR---FKPGKMMRTKVGTPYYVS 193
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
P++ GL G + D WS+GV +
Sbjct: 194 PQVLEGL---YGPECDEWSAGVMM 214
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 109/202 (53%), Gaps = 15/202 (7%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +LG+GS+G+V D T AVK+ K+++++ + E ++ RE++LLK L H
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLREVQLLKQLDH 91
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDST-PYKKFPIWQAHGYFLQLLDGLEY 156
N++ L + F + K YL+ E GG ++ D K+F A Q+L G+ Y
Sbjct: 92 PNIMKLYEFF--EDKGYFYLVGEVYTGG--ELFDEIISRKRFSEVDAARIIRQVLSGITY 147
Query: 157 LHSQGIIHKDIKPGNLLL---TLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
+H I+H+D+KP NLLL + D ++I DFG++ F + G+ + APE
Sbjct: 148 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH---FEASKKMKDKIGTAYYIAPE 204
Query: 214 IANGLPEISGYKVDIWSSGVTL 235
+ +G + K D+WS+GV L
Sbjct: 205 VLHGTYD---EKCDVWSTGVIL 223
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 32 IGSGAQGIVCAAYDA--ILERNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
GL++VF K Q +Y++ME L Q LD + Y L Q+L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTR----YYRA 193
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 194 PEVILGM----GYKENVDIWSVGCIM 215
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D R A+K + Q + REI++L +H
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTL---REIQILLRFRH 100
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-QLLD 152
NVIG+ D+ + M + Y V QD++++ YK Q YFL Q+L
Sbjct: 101 ENVIGIRDILRASTLEAMRDV--YIV---QDLMETDLYKLLKSQQLSNDHICYFLYQILR 155
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSPVFQ 210
GL+Y+HS ++H+D+KP NLL+ LKI DFG+A D HD T +T + ++
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADP-EHDHTGFLTEXVATRWYR 214
Query: 211 APEIANGLPEISGY--KVDIWSSGVTL 235
APEI + GY +DIWS G L
Sbjct: 215 APEI---MLNSKGYTKSIDIWSVGCIL 238
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 107/206 (51%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 32 IGSGAQGIVCAAYDA--ILERNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
GL++VF K Q +Y++ME L Q LD + Y L Q+L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + + T ++A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTR----YYRA 193
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VD+WS G +
Sbjct: 194 PEVILGM----GYKENVDLWSVGCIM 215
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 106/206 (51%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 32 IGSGAQGIVCAAYDA--ILERNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGLQDM----LDSTPYKKFPIWQAHGYFL-QLLD 152
GL++VF K Q +Y++ME L + LD + Y L Q+L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH---------ERMSYLLYQMLC 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 193
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 194 PEVILGM----GYKENVDIWSVGCIM 215
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKILLAFRH 82
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-QLLD 152
N+IG+ D+ ++M + Y V QD++++ YK YFL Q+L
Sbjct: 83 ENIIGINDIIRAPTIEQMKDV--YIV---QDLMETDLYKLLKTQHLSNDHICYFLYQILR 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSPVFQ 210
GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T + ++
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPD-HDHTGFLTEYVATRWYR 196
Query: 211 APEIANGLPEISGY--KVDIWSSGVTL 235
APEI + GY +DIWS G L
Sbjct: 197 APEI---MLNSKGYTKSIDIWSVGCIL 220
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 32 IGSGAQGIVCAAYDA--ILERNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
GL++VF K Q +Y++ME L Q LD + Y L Q+L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 193
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 194 PEVILGM----GYKENVDIWSVGCIM 215
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 32 IGSGAQGIVCAAYDA--ILERNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
GL++VF K Q +Y++ME L Q LD + Y L Q+L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 193
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 194 PEVILGM----GYKENVDIWSVGCIM 215
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 33 IGSGAQGIVCAAYDA--ILERNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 87
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
GL++VF K Q +Y++ME L Q LD + Y L Q+L
Sbjct: 88 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 138
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 194
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 195 PEVILGM----GYKENVDIWSVGCIM 216
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 105/199 (52%), Gaps = 16/199 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
Y D+LG G++ +V D T A+K K+ L+ E +++ EI +L ++H
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE---GKEGSMENEIAVLHKIKHP 76
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQ-AHGYFLQLLDGLEYL 157
N++ L D++ + +YLIM+ GG ++ D K F + A Q+LD ++YL
Sbjct: 77 NIVALDDIY--ESGGHLYLIMQLVSGG--ELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 158 HSQGIIHKDIKPGNLL---LTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
H GI+H+D+KP NLL L D + ISDFG+++ D ++T+ G+P + APE+
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED---PGSVLSTACGTPGYVAPEV 189
Query: 215 ANGLPEISGYKVDIWSSGV 233
P VD WS GV
Sbjct: 190 LAQKPYSKA--VDCWSIGV 206
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 106/199 (53%), Gaps = 9/199 (4%)
Query: 35 MIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKM 94
++ KY + +GEG+YG V + DS+ +I + + IP+ I REI LLK
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAI---REISLLKE 75
Query: 95 LQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGL 154
L H N++ L+DV +++ + L+ E+ L+ +LD Q Y QLL G+
Sbjct: 76 LHHPNIVSLIDVIHSERC--LTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGV 132
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
+ H I+H+D+KP NLL+ DG LK++DFG+A + + + + T + ++AP++
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR--SYTHEVVTLWYRAPDV 190
Query: 215 ANGLPEISGYKVDIWSSGV 233
G + S VDIWS G
Sbjct: 191 LMGSKKYST-SVDIWSIGC 208
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 24/204 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
YV+ + +G GSY + K + T AVK+ K K R P+ EI + LL+ QH
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK--RDPSEEIEI-----LLRYGQHP 81
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLL-DGLEYL 157
N+I L DV+ D + +YL+ E GG ++LD +KF + + L + +EYL
Sbjct: 82 NIITLKDVY--DDGKHVYLVTELMRGG--ELLDKILRQKFFSEREASFVLHTIGKTVEYL 137
Query: 158 HSQGIIHKDIKPGNLLLTLDG----TLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
HSQG++H+D+KP N+L + L+I DFG A+ L + + T + F APE
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA--ENGLLMTPCYTANFVAPE 195
Query: 214 IANGLPEISGYK--VDIWSSGVTL 235
+ + GY DIWS G+ L
Sbjct: 196 VL----KRQGYDEGCDIWSLGILL 215
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 24/204 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
YV+ + +G GSY + K + T AVK+ K K R P+ EI + LL+ QH
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK--RDPSEEIEI-----LLRYGQHP 81
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLL-DGLEYL 157
N+I L DV+ D + +YL+ E GG ++LD +KF + + L + +EYL
Sbjct: 82 NIITLKDVY--DDGKHVYLVTELMRGG--ELLDKILRQKFFSEREASFVLHTIGKTVEYL 137
Query: 158 HSQGIIHKDIKPGNLLLTLDG----TLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
HSQG++H+D+KP N+L + L+I DFG A+ L + + T + F APE
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA--ENGLLMTPCYTANFVAPE 195
Query: 214 IANGLPEISGYK--VDIWSSGVTL 235
+ + GY DIWS G+ L
Sbjct: 196 VL----KRQGYDEGCDIWSLGILL 215
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 105/199 (52%), Gaps = 16/199 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
Y D+LG G++ +V D T A+K K+ L+ E +++ EI +L ++H
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE---GKEGSMENEIAVLHKIKHP 76
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQ-AHGYFLQLLDGLEYL 157
N++ L D++ + +YLIM+ GG ++ D K F + A Q+LD ++YL
Sbjct: 77 NIVALDDIY--ESGGHLYLIMQLVSGG--ELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 158 HSQGIIHKDIKPGNLL---LTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
H GI+H+D+KP NLL L D + ISDFG+++ D ++T+ G+P + APE+
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED---PGSVLSTACGTPGYVAPEV 189
Query: 215 ANGLPEISGYKVDIWSSGV 233
P VD WS GV
Sbjct: 190 LAQKPYSKA--VDCWSIGV 206
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 106/199 (53%), Gaps = 9/199 (4%)
Query: 35 MIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKM 94
++ KY + +GEG+YG V + DS+ +I + + IP+ I REI LLK
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAI---REISLLKE 75
Query: 95 LQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGL 154
L H N++ L+DV +++ + L+ E+ L+ +LD Q Y QLL G+
Sbjct: 76 LHHPNIVSLIDVIHSERC--LTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGV 132
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
+ H I+H+D+KP NLL+ DG LK++DFG+A + + + + T + ++AP++
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR--SYTHEVVTLWYRAPDV 190
Query: 215 ANGLPEISGYKVDIWSSGV 233
G + S VDIWS G
Sbjct: 191 LMGSKKYST-SVDIWSIGC 208
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKILLAFRH 82
Query: 98 RNVIGLVDVFVNDKKQKM---YLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-Q 149
N+IG+ D+ ++M Y++ QD++++ YK YFL Q
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIV--------QDLMETDLYKLLKTQHLSNDHICYFLYQ 134
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSP 207
+L GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T +
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTGFLTEYVATR 193
Query: 208 VFQAPEIANGLPEISGY--KVDIWSSGVTL 235
++APEI + GY +DIWS G L
Sbjct: 194 WYRAPEI---MLNSKGYTKSIDIWSVGCIL 220
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 105/199 (52%), Gaps = 16/199 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
Y D+LG G++ +V D T A+K K+ L+ E +++ EI +L ++H
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE---GKEGSMENEIAVLHKIKHP 76
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQ-AHGYFLQLLDGLEYL 157
N++ L D++ + +YLIM+ GG ++ D K F + A Q+LD ++YL
Sbjct: 77 NIVALDDIY--ESGGHLYLIMQLVSGG--ELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 158 HSQGIIHKDIKPGNLL---LTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
H GI+H+D+KP NLL L D + ISDFG+++ D ++T+ G+P + APE+
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP---GSVLSTACGTPGYVAPEV 189
Query: 215 ANGLPEISGYKVDIWSSGV 233
P VD WS GV
Sbjct: 190 LAQKPYSKA--VDCWSIGV 206
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 84
Query: 98 RNVIGLVDVFVNDKKQKM---YLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-Q 149
N+IG+ D+ ++M Y++ QD++++ YK YFL Q
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIV--------QDLMETDLYKLLKCQHLSNDHICYFLYQ 136
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSP 207
+L GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTGFLTEYVATR 195
Query: 208 VFQAPEIANGLPEISGY--KVDIWSSGVTL 235
++APEI + GY +DIWS G L
Sbjct: 196 WYRAPEI---MLNSKGYTKSIDIWSVGCIL 222
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 88
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-QLLD 152
N+IG+ D+ ++M + Y V QD++++ YK YFL Q+L
Sbjct: 89 ENIIGINDIIRAPTIEQMKDV--YIV---QDLMETDLYKLLKTQHLSNDHICYFLYQILR 143
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSPVFQ 210
GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T + ++
Sbjct: 144 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTGFLTEYVATRWYR 202
Query: 211 APEIANGLPEISGY--KVDIWSSGVTL 235
APEI + GY +DIWS G L
Sbjct: 203 APEI---MLNSKGYTKSIDIWSVGCIL 226
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 80
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-QLLD 152
N+IG+ D+ ++M + Y V QD++++ YK YFL Q+L
Sbjct: 81 ENIIGINDIIRAPTIEQMKDV--YIV---QDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSPVFQ 210
GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T + ++
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTGFLTEYVATRWYR 194
Query: 211 APEIANGLPEISGY--KVDIWSSGVTL 235
APEI + GY +DIWS G L
Sbjct: 195 APEI---MLNSKGYTKSIDIWSVGCIL 218
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 28/204 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG-------EINVDREIRLLKMLQ- 96
+G G+YG V + D + F K R+PNG I+ RE+ LL+ L+
Sbjct: 17 IGVGAYGTVYKARDPHS------GHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEA 70
Query: 97 --HRNVIGLVDVFVN---DKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLL 151
H NV+ L+DV D++ K+ L+ E+ L+ LD P P Q L
Sbjct: 71 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 130
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAE--SLDMFLHDDTITTSQGSPVF 209
GL++LH+ I+H+D+KP N+L+T GT+K++DFG+A S M L +T +
Sbjct: 131 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLW-----Y 185
Query: 210 QAPEIANGLPEISGYKVDIWSSGV 233
+APE+ L VD+WS G
Sbjct: 186 RAPEVL--LQSTYATPVDMWSVGC 207
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 82
Query: 98 RNVIGLVDVFVNDKKQKM---YLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-Q 149
N+IG+ D+ ++M Y++ QD++++ YK YFL Q
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIV--------QDLMETDLYKLLKTQHLSNDHICYFLYQ 134
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSP 207
+L GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T +
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTGFLTEYVATR 193
Query: 208 VFQAPEIANGLPEISGY--KVDIWSSGVTL 235
++APEI + GY +DIWS G L
Sbjct: 194 WYRAPEI---MLNSKGYTKSIDIWSVGCIL 220
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 80
Query: 98 RNVIGLVDVFVNDKKQKM---YLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-Q 149
N+IG+ D+ ++M Y++ QD++++ YK YFL Q
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIV--------QDLMETDLYKLLKTQHLSNDHICYFLYQ 132
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSP 207
+L GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T +
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTGFLTEYVATR 191
Query: 208 VFQAPEIANGLPEISGY--KVDIWSSGVTL 235
++APEI + GY +DIWS G L
Sbjct: 192 WYRAPEI---MLNSKGYTKSIDIWSVGCIL 218
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 100
Query: 98 RNVIGLVDVFVNDKKQKM---YLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-Q 149
N+IG+ D+ ++M Y++ QD++++ YK YFL Q
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYIV--------QDLMETDLYKLLKTQHLSNDHICYFLYQ 152
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSP 207
+L GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T +
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTGFLTEYVATR 211
Query: 208 VFQAPEIANGLPEISGY--KVDIWSSGVTL 235
++APEI + GY +DIWS G L
Sbjct: 212 WYRAPEI---MLNSKGYTKSIDIWSVGCIL 238
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 108/198 (54%), Gaps = 16/198 (8%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
KY + +G+G+ G V +D T A++ + LQ+ P E+ ++ EI +++ ++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIR---QMNLQQQPKKELIIN-EILVMRENKN 76
Query: 98 RNVIGLVDVF-VNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
N++ +D + V D+ ++++MEY GG L D++ T + Q + L LE
Sbjct: 77 PNIVNYLDSYLVGDE---LWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALE 130
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIA 215
+LHS +IH+DIK N+LL +DG++K++DFG + +T G+P + APE+
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMVGTPYWMAPEVV 188
Query: 216 NGLPEISGYKVDIWSSGV 233
+ G KVDIWS G+
Sbjct: 189 TR--KAYGPKVDIWSLGI 204
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 78
Query: 98 RNVIGLVDVFVNDKKQKM---YLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-Q 149
N+IG+ D+ ++M Y++ QD++++ YK YFL Q
Sbjct: 79 ENIIGINDIIRAPTIEQMKDVYIV--------QDLMETDLYKLLKTQHLSNDHICYFLYQ 130
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSP 207
+L GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T +
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTGFLTEYVATR 189
Query: 208 VFQAPEIANGLPEISGY--KVDIWSSGVTL 235
++APEI + GY +DIWS G L
Sbjct: 190 WYRAPEI---MLNSKGYTKSIDIWSVGCIL 216
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 85
Query: 98 RNVIGLVDVFVNDKKQKM---YLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-Q 149
N+IG+ D+ ++M Y++ QD++++ YK YFL Q
Sbjct: 86 ENIIGINDIIRAPTIEQMKDVYIV--------QDLMETDLYKLLKTQHLSNDHICYFLYQ 137
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSP 207
+L GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T +
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTGFLTEYVATR 196
Query: 208 VFQAPEIANGLPEISGY--KVDIWSSGVTL 235
++APEI + GY +DIWS G L
Sbjct: 197 WYRAPEI---MLNSKGYTKSIDIWSVGCIL 223
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 106/206 (51%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 26 IGSGAQGIVCAAYDA--ILERNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 80
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
GL++VF K Q +Y++ME L Q LD + Y L Q+L
Sbjct: 81 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 131
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 187
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VD+WS G +
Sbjct: 188 PEVILGM----GYKENVDLWSVGCIM 209
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 86
Query: 98 RNVIGLVDVFVNDKKQKM---YLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-Q 149
N+IG+ D+ ++M Y++ QD++++ YK YFL Q
Sbjct: 87 ENIIGINDIIRAPTIEQMKDVYIV--------QDLMETDLYKLLKTQHLSNDHICYFLYQ 138
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSP 207
+L GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T +
Sbjct: 139 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTGFLTEYVATR 197
Query: 208 VFQAPEIANGLPEISGY--KVDIWSSGVTL 235
++APEI + GY +DIWS G L
Sbjct: 198 WYRAPEI---MLNSKGYTKSIDIWSVGCIL 224
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 77
Query: 98 RNVIGLVDVFVNDKKQKM---YLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-Q 149
N+IG+ D+ ++M Y++ QD++++ YK YFL Q
Sbjct: 78 ENIIGINDIIRAPTIEQMKDVYIV--------QDLMETDLYKLLKTQHLSNDHICYFLYQ 129
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSP 207
+L GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T +
Sbjct: 130 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTGFLTEYVATR 188
Query: 208 VFQAPEIANGLPEISGY--KVDIWSSGVTL 235
++APEI + GY +DIWS G L
Sbjct: 189 WYRAPEI---MLNSKGYTKSIDIWSVGCIL 215
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 84
Query: 98 RNVIGLVDVFVNDKKQKM---YLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-Q 149
N+IG+ D+ ++M Y++ QD++++ YK YFL Q
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIV--------QDLMETDLYKLLKTQHLSNDHICYFLYQ 136
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSP 207
+L GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTGFLTEYVATR 195
Query: 208 VFQAPEIANGLPEISGY--KVDIWSSGVTL 235
++APEI + GY +DIWS G L
Sbjct: 196 WYRAPEI---MLNSKGYTKSIDIWSVGCIL 222
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTL---REIKILLRFRH 84
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-QLLD 152
N+IG+ D+ ++M + Y V QD++++ YK YFL Q+L
Sbjct: 85 ENIIGINDIIRAPTIEQMKDV--YIV---QDLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSPVFQ 210
GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T + ++
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD-HDHTGFLTEYVATRWYR 198
Query: 211 APEIANGLPEISGY--KVDIWSSGVTL 235
APEI + GY +DIWS G L
Sbjct: 199 APEI---MLNSKGYTKSIDIWSVGCIL 222
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 80
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-QLLD 152
N+IG+ D+ ++M + Y V QD++++ YK YFL Q+L
Sbjct: 81 ENIIGINDIIRAPTIEQMKDV--YIV---QDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSPVFQ 210
GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T + ++
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD-HDHTGFLTEYVATRWYR 194
Query: 211 APEIANGLPEISGY--KVDIWSSGVTL 235
APEI + GY +DIWS G L
Sbjct: 195 APEI---MLNSKGYTKSIDIWSVGCIL 218
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 34 IGSGAQGIVCAAYDA--ILERNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 88
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
GL++VF K Q +Y++ME L Q LD + Y L Q+L
Sbjct: 89 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 139
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 140 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTR----YYRA 195
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 196 PEVILGM----GYKENVDIWSVGCIM 217
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 78
Query: 98 RNVIGLVDVFVNDKKQKM---YLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-Q 149
N+IG+ D+ ++M Y++ QD++++ YK YFL Q
Sbjct: 79 ENIIGINDIIRAPTIEQMKDVYIV--------QDLMETDLYKLLKTQHLSNDHICYFLYQ 130
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSP 207
+L GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T +
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTGFLTEYVATR 189
Query: 208 VFQAPEIANGLPEISGY--KVDIWSSGVTL 235
++APEI + GY +DIWS G L
Sbjct: 190 WYRAPEI---MLNSKGYTKSIDIWSVGCIL 216
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 80
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-QLLD 152
N+IG+ D+ ++M + Y V QD++++ YK YFL Q+L
Sbjct: 81 ENIIGINDIIRAPTIEQMKDV--YIV---QDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSPVFQ 210
GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T + ++
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD-HDHTGFLTEYVATRWYR 194
Query: 211 APEIANGLPEISGY--KVDIWSSGVTL 235
APEI + GY +DIWS G L
Sbjct: 195 APEI---MLNSKGYTKSIDIWSVGCIL 218
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 106/206 (51%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 37 IGSGAQGIVCAAYDA--ILERNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 91
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
GL++VF K Q +Y++ME L Q LD + Y L Q+L
Sbjct: 92 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 142
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 143 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 198
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VD+WS G +
Sbjct: 199 PEVILGM----GYKENVDLWSVGCIM 220
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 124/253 (49%), Gaps = 46/253 (18%)
Query: 5 DDEVDGDMISIFHRVDSDQVIYDNKTIKVKM-------IGKYVMGDLLGEGSYGKVKEML 57
D +VD I+ + + +V DN+ V++ + +Y +G G+ G V
Sbjct: 25 DKQVDVSYIAKHYNMSKSKV--DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAY 82
Query: 58 DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVIGLVDVFVNDKK-- 112
D+ + R V I KKL R + + R R L+K + H+N+I L++VF K
Sbjct: 83 DA--VLDRNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE 137
Query: 113 --QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLDGLEYLHSQGIIHK 165
Q +YL+ME L Q LD + Y L Q+L G+++LHS GIIH+
Sbjct: 138 EFQDVYLVMELMDANLCQVIQMELDH---------ERMSYLLYQMLCGIKHLHSAGIIHR 188
Query: 166 DIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQAPEIANGLPEISGY 224
D+KP N+++ D TLKI DFG+A + F+ + T ++APE+ G+ GY
Sbjct: 189 DLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR----YYRAPEVILGM----GY 240
Query: 225 K--VDIWSSGVTL 235
K VDIWS G +
Sbjct: 241 KENVDIWSVGCIM 253
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 84
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-QLLD 152
N+IG+ D+ ++M + Y V QD++++ YK YFL Q+L
Sbjct: 85 ENIIGINDIIRAPTIEQMKDV--YIV---QDLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSPVFQ 210
GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T + ++
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD-HDHTGFLTEYVATRWYR 198
Query: 211 APEIANGLPEISGY--KVDIWSSGVTL 235
APEI + GY +DIWS G L
Sbjct: 199 APEI---MLNSKGYTKSIDIWSVGCIL 222
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 124/253 (49%), Gaps = 46/253 (18%)
Query: 5 DDEVDGDMISIFHRVDSDQVIYDNKTIKVKM-------IGKYVMGDLLGEGSYGKVKEML 57
D +VD I+ + + +V DN+ V++ + +Y +G G+ G V
Sbjct: 25 DKQVDVSYIAKHYNMSKSKV--DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAY 82
Query: 58 DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVIGLVDVFVNDKK-- 112
D+ + R V I KKL R + + R R L+K + H+N+I L++VF K
Sbjct: 83 DA--VLDRNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE 137
Query: 113 --QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLDGLEYLHSQGIIHK 165
Q +YL+ME L Q LD + Y L Q+L G+++LHS GIIH+
Sbjct: 138 EFQDVYLVMELMDANLCQVIQMELDH---------ERMSYLLYQMLCGIKHLHSAGIIHR 188
Query: 166 DIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQAPEIANGLPEISGY 224
D+KP N+++ D TLKI DFG+A + F+ + T ++APE+ G+ GY
Sbjct: 189 DLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR----YYRAPEVILGM----GY 240
Query: 225 K--VDIWSSGVTL 235
K VDIWS G +
Sbjct: 241 KENVDIWSVGCIM 253
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 80
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-QLLD 152
N+IG+ D+ ++M + Y V QD++++ YK YFL Q+L
Sbjct: 81 ENIIGINDIIRAPTIEQMKDV--YIV---QDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSPVFQ 210
GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T + ++
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPD-HDHTGFLTEYVATRWYR 194
Query: 211 APEIANGLPEISGY--KVDIWSSGVTL 235
APEI + GY +DIWS G L
Sbjct: 195 APEI---MLNSKGYTKSIDIWSVGCIL 218
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +LG+GS+G+V D T AVK+ K+++++ + E ++ RE++LLK L H
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLREVQLLKQLDH 85
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDST-PYKKFPIWQAHGYFLQLLDGLEY 156
N+ L + F + K YL+ E GG ++ D K+F A Q+L G+ Y
Sbjct: 86 PNIXKLYEFF--EDKGYFYLVGEVYTGG--ELFDEIISRKRFSEVDAARIIRQVLSGITY 141
Query: 157 LHSQGIIHKDIKPGNLLL---TLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
H I+H+D+KP NLLL + D ++I DFG++ F G+ + APE
Sbjct: 142 XHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST---HFEASKKXKDKIGTAYYIAPE 198
Query: 214 IANGLPEISGYKVDIWSSGVTL 235
+ +G + K D+WS+GV L
Sbjct: 199 VLHGTYD---EKCDVWSTGVIL 217
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 107/216 (49%), Gaps = 37/216 (17%)
Query: 35 MIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---L 91
++ +Y +G G+ G V D+ AVK KL R + + R R L
Sbjct: 20 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK-----KLSRPFQNQTHAKRAYRELVL 74
Query: 92 LKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDM----LDSTPYKKFPIWQA 143
LK + H+N+I L++VF K Q +YL+ME L + LD +
Sbjct: 75 LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH---------ER 125
Query: 144 HGYFL-QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDM-FLHDDTIT 201
Y L Q+L G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ +
Sbjct: 126 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVV 185
Query: 202 TSQGSPVFQAPEIANGLPEISGYK--VDIWSSGVTL 235
T ++APE+ G+ GYK VDIWS G +
Sbjct: 186 TR----YYRAPEVILGM----GYKENVDIWSVGCIM 213
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 16/195 (8%)
Query: 43 DLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIG 102
+ LG G++ +V + T AVK KK L+ E +++ EI +L+ ++H N++
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALK---GKESSIENEIAVLRKIKHENIVA 84
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQ-AHGYFLQLLDGLEYLHSQG 161
L D++ + +YL+M+ GG ++ D K F + A Q+LD + YLH G
Sbjct: 85 LEDIY--ESPNHLYLVMQLVSGG--ELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMG 140
Query: 162 IIHKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGL 218
I+H+D+KP NLL + + ISDFG+++ M D ++T+ G+P + APE+
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSK---MEGKGDVMSTACGTPGYVAPEVLAQK 197
Query: 219 PEISGYKVDIWSSGV 233
P VD WS GV
Sbjct: 198 PYSKA--VDCWSIGV 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 107/194 (55%), Gaps = 19/194 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+G+GS+G+V + +D+ T A+KI L+ + ++ +EI +L V
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQ-DMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
++ K K+++IMEY GG D+L + P+ +F Q ++L GL+YLHS+ I
Sbjct: 88 GSYL--KGSKLWIIMEYLGGGSALDLLRAGPFDEF---QIATMLKEILKGLDYLHSEKKI 142
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
H+DIK N+LL+ G +K++DFGVA L D + +T G+P + APE+ + S
Sbjct: 143 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV---GTPFWMAPEVI----QQS 195
Query: 223 GY--KVDIWSSGVT 234
Y K DIWS G+T
Sbjct: 196 AYDSKADIWSLGIT 209
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 100
Query: 98 RNVIGLVDVFVNDKKQKM---YLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL-QLLDG 153
N+IG+ D+ ++M YL+ L +L + I YFL Q+L G
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHI----CYFLYQILRG 156
Query: 154 LEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSPVFQA 211
L+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T + ++A
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD-HDHTGFLTEYVATRWYRA 215
Query: 212 PEIANGLPEISGY--KVDIWSSGVTL 235
PEI + GY +DIWS G L
Sbjct: 216 PEI---MLNSKGYTKSIDIWSVGCIL 238
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A++ + Q + REI++L +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTL---REIKILLRFRH 84
Query: 98 RNVIGLVDVFVNDKKQKM---YLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-Q 149
N+IG+ D+ ++M Y++ QD++++ YK YFL Q
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIV--------QDLMETDLYKLLKTQHLSNDHICYFLYQ 136
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSP 207
+L GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T +T +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTGFLTEYVATR 195
Query: 208 VFQAPEIANGLPEISGY--KVDIWSSGVTL 235
++APEI + GY +DIWS G L
Sbjct: 196 WYRAPEI---MLNSKGYTKSIDIWSVGCIL 222
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 32 IGSGAQGIVCAAYDA--VLDRNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
L++VF K Q +YL+ME L Q LD + Y L Q+L
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDH---------ERMSYLLYQMLX 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 193
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 194 PEVILGM----GYKENVDIWSVGCIM 215
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 32 IGSGAQGIVCAAYDA--VLDRNVAI---KKLSRPFQNQTHAKRAYRELVLMKXVNHKNII 86
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
L++VF K Q +YL+ME L Q LD + Y L Q+L
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDH---------ERMSYLLYQMLX 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 193
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 194 PEVILGM----GYKENVDIWSVGCIM 215
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 25 IGSGAQGIVCAAYDA--VLDRNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 79
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
L++VF K Q +YL+ME L Q LD + Y L Q+L
Sbjct: 80 SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDH---------ERMSYLLYQMLX 130
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 186
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 187 PEVILGM----GYKENVDIWSVGCIM 208
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 31 IGSGAQGIVCAAYDA--VLDRNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 85
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
L++VF K Q +YL+ME L Q LD + Y L Q+L
Sbjct: 86 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 136
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 137 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 192
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 193 PEVILGM----GYKENVDIWSVGCIM 214
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 33 IGSGAQGIVCAAYDA--VLDRNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 87
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
L++VF K Q +YL+ME L Q LD + Y L Q+L
Sbjct: 88 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 138
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 194
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 195 PEVILGM----GYKENVDIWSVGCIM 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 32 IGSGAQGIVCAAYDA--VLDRNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
L++VF K Q +YL+ME L Q LD + Y L Q+L
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 193
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 194 PEVILGM----GYKENVDIWSVGCIM 215
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 26 IGSGAQGIVCAAYDA--VLDRNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 80
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
L++VF K Q +YL+ME L Q LD + Y L Q+L
Sbjct: 81 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 131
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 187
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 188 PEVILGM----GYKENVDIWSVGCIM 209
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 32 IGSGAQGIVCAAYDA--VLDRNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
L++VF K Q +YL+ME L Q LD + Y L Q+L
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 193
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 194 PEVILGM----GYKENVDIWSVGCIM 215
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 25 IGSGAQGIVCAAYDA--VLDRNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 79
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
L++VF K Q +YL+ME L Q LD + Y L Q+L
Sbjct: 80 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 130
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 186
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 187 PEVILGM----GYKENVDIWSVGCIM 208
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 26 IGSGAQGIVCAAYDA--VLDRNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 80
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
L++VF K Q +YL+ME L Q LD + Y L Q+L
Sbjct: 81 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 131
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 187
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 188 PEVILGM----GYKENVDIWSVGCIM 209
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 33 IGSGAQGIVCAAYDA--VLDRNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 87
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
L++VF K Q +YL+ME L Q LD + Y L Q+L
Sbjct: 88 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 138
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 194
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 195 PEVILGM----GYKENVDIWSVGCIM 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 108/198 (54%), Gaps = 16/198 (8%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
KY + +G+G+ G V +D T A++ + LQ+ P E+ ++ EI +++ ++
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIR---QMNLQQQPKKELIIN-EILVMRENKN 77
Query: 98 RNVIGLVDVF-VNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
N++ +D + V D+ ++++MEY GG L D++ T + Q + L LE
Sbjct: 78 PNIVNYLDSYLVGDE---LWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALE 131
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIA 215
+LHS +IH++IK N+LL +DG++K++DFG + +T G+P + APE+
Sbjct: 132 FLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMVGTPYWMAPEVV 189
Query: 216 NGLPEISGYKVDIWSSGV 233
+ G KVDIWS G+
Sbjct: 190 TR--KAYGPKVDIWSLGI 205
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 32 IGSGAQGIVCAAYDA--VLDRNVAI---KKLSRPFQNQTHAKRAYRELVLMKXVNHKNII 86
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
L++VF K Q +YL+ME L Q LD + Y L Q+L
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH---------ERMSYLLYQMLC 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 193
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 194 PEVILGM----GYKENVDIWSVGCIM 215
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 18/204 (8%)
Query: 38 KYVMGDL-----LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
KY + D LG GS+G+V + A+K+ KK+ + R+ E D + +L
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERL-ML 60
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLL 151
++ H +I + F + Q++++IM+Y GG L +L + ++FP A Y ++
Sbjct: 61 SIVTHPFIIRMWGTFQD--AQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVC 116
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
LEYLHS+ II++D+KP N+LL +G +KI+DFG A+ + D G+P + A
Sbjct: 117 LALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV-----PDVTYXLCGTPDYIA 171
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE+ + P +D WS G+ +
Sbjct: 172 PEVVSTKP--YNKSIDWWSFGILI 193
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 37/206 (17%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---LLKMLQHRNVI 101
+G G+ G V D+ + R V I KKL R + + R R L+K + H+N+I
Sbjct: 32 IGSGAQGIVCAAYDA--VLDRNVAI---KKLSRPFQNQTHAKRAYRELVLMKXVNHKNII 86
Query: 102 GLVDVFVNDKK----QKMYLIMEYCVGGL----QDMLDSTPYKKFPIWQAHGYFL-QLLD 152
L++VF K Q +YL+ME L Q LD + Y L Q+L
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDH---------ERMSYLLYQMLC 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQA 211
G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ + T ++A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR----YYRA 193
Query: 212 PEIANGLPEISGYK--VDIWSSGVTL 235
PE+ G+ GYK VDIWS G +
Sbjct: 194 PEVILGM----GYKENVDIWSVGCIM 215
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 27/210 (12%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 84
Query: 98 RNVIGLVDVFVNDKKQKM---YLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-Q 149
N+IG+ D+ ++M Y++ QD++++ YK YFL Q
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIV--------QDLMETDLYKLLKTQHLSNDHICYFLYQ 136
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSP 207
+L GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T + +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTGFLXEXVATR 195
Query: 208 VFQAPEIANGLPEISGY--KVDIWSSGVTL 235
++APEI + GY +DIWS G L
Sbjct: 196 WYRAPEI---MLNSKGYTKSIDIWSVGCIL 222
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 27/210 (12%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y +GEG+YG V D+ R A+K + Q + REI++L +H
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKILLRFRH 85
Query: 98 RNVIGLVDVFVNDKKQKM---YLIMEYCVGGLQDMLDSTPYKKFPIWQAHG----YFL-Q 149
N+IG+ D+ ++M Y++ QD++++ YK YFL Q
Sbjct: 86 ENIIGINDIIRAPTIEQMKDVYIV--------QDLMETDLYKLLKTQHLSNDHICYFLYQ 137
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT--ITTSQGSP 207
+L GL+Y+HS ++H+D+KP NLLL LKI DFG+A D HD T + +
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTGFLXEXVATR 196
Query: 208 VFQAPEIANGLPEISGY--KVDIWSSGVTL 235
++APEI + GY +DIWS G L
Sbjct: 197 WYRAPEI---MLNSKGYTKSIDIWSVGCIL 223
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 111/209 (53%), Gaps = 14/209 (6%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVK-IFKKKKLQRIPNGEINVDREIRLLKM 94
+ KY +G+G++G+V + +T + A+K + + + + P I REI++L++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFP---ITALREIKILQL 73
Query: 95 LQHRNVIGLVDVF------VNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL 148
L+H NV+ L+++ N K +YL+ ++C L +L S KF + +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQ 132
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD--DTITTSQGS 206
LL+GL Y+H I+H+D+K N+L+T DG LK++DFG+A + + + + +
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 207 PVFQAPEIANGLPEISGYKVDIWSSGVTL 235
++ PE+ G + G +D+W +G +
Sbjct: 193 LWYRPPELLLGERDY-GPPIDLWGAGCIM 220
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 107/198 (54%), Gaps = 16/198 (8%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
KY + +G+G+ G V +D T A++ + LQ+ P E+ ++ EI +++ ++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIR---QMNLQQQPKKELIIN-EILVMRENKN 76
Query: 98 RNVIGLVDVF-VNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
N++ +D + V D+ ++++MEY GG L D++ T + Q + L LE
Sbjct: 77 PNIVNYLDSYLVGDE---LWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALE 130
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIA 215
+LHS +IH+DIK N+LL +DG++K++DFG + + G+P + APE+
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSEMVGTPYWMAPEVV 188
Query: 216 NGLPEISGYKVDIWSSGV 233
+ G KVDIWS G+
Sbjct: 189 TR--KAYGPKVDIWSLGI 204
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 107/198 (54%), Gaps = 16/198 (8%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
KY + +G+G+ G V +D T A++ + LQ+ P E+ ++ EI +++ ++
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIR---QMNLQQQPKKELIIN-EILVMRENKN 77
Query: 98 RNVIGLVDVF-VNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
N++ +D + V D+ ++++MEY GG L D++ T + Q + L LE
Sbjct: 78 PNIVNYLDSYLVGDE---LWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALE 131
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIA 215
+LHS +IH+DIK N+LL +DG++K++DFG + + G+P + APE+
Sbjct: 132 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSXMVGTPYWMAPEVV 189
Query: 216 NGLPEISGYKVDIWSSGV 233
+ G KVDIWS G+
Sbjct: 190 TR--KAYGPKVDIWSLGI 205
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 107/198 (54%), Gaps = 16/198 (8%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
KY + +G+G+ G V +D T A++ + LQ+ P E+ ++ EI +++ ++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIR---QMNLQQQPKKELIIN-EILVMRENKN 76
Query: 98 RNVIGLVDVF-VNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
N++ +D + V D+ ++++MEY GG L D++ T + Q + L LE
Sbjct: 77 PNIVNYLDSYLVGDE---LWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALE 130
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIA 215
+LHS +IH+DIK N+LL +DG++K++DFG + + G+P + APE+
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSXMVGTPYWMAPEVV 188
Query: 216 NGLPEISGYKVDIWSSGV 233
+ G KVDIWS G+
Sbjct: 189 TR--KAYGPKVDIWSLGI 204
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 112/213 (52%), Gaps = 15/213 (7%)
Query: 24 VIYDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI 83
V+ D +T+K +Y+ G LG+G + K E+ D +T A K+ K L + P+ +
Sbjct: 34 VLVDPRTMK-----RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLK-PHQKE 87
Query: 84 NVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
+ EI + K L + +V+G F +D +Y+++E C + +L+ +K
Sbjct: 88 KMSTEIAIHKSLDNPHVVGFHGFFEDD--DFVYVVLEIC--RRRSLLELHKRRKAVTEPE 143
Query: 144 HGYFL-QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
YF+ Q + G++YLH+ +IH+D+K GNL L D +KI DFG+A ++ + T
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE--FDGERKKT 201
Query: 203 SQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APE+ + ++VDIWS G L
Sbjct: 202 LCGTPNYIAPEVLCK--KGHSFEVDIWSLGCIL 232
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 12/195 (6%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG G+Y V + L+ T A+K K + P+ I REI L+K L+H N++ L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAI---REISLMKELKHENIVRLY 69
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPI---WQAHGYF-LQLLDGLEYLHSQ 160
DV + K+ L+ E+ L+ +DS P YF QLL GL + H
Sbjct: 70 DVI--HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN 127
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPE 220
I+H+D+KP NLL+ G LK+ DFG+A + + + +T ++ + ++AP++ G
Sbjct: 128 KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV--NTFSSEVVTLWYRAPDVLMGSRT 185
Query: 221 ISGYKVDIWSSGVTL 235
S +DIWS G L
Sbjct: 186 YST-SIDIWSCGCIL 199
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 111/209 (53%), Gaps = 14/209 (6%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVK-IFKKKKLQRIPNGEINVDREIRLLKM 94
+ KY +G+G++G+V + +T + A+K + + + + P I REI++L++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFP---ITALREIKILQL 73
Query: 95 LQHRNVIGLVDVF------VNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL 148
L+H NV+ L+++ N K +YL+ ++C L +L S KF + +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQ 132
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD--DTITTSQGS 206
LL+GL Y+H I+H+D+K N+L+T DG LK++DFG+A + + + + +
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 207 PVFQAPEIANGLPEISGYKVDIWSSGVTL 235
++ PE+ G + G +D+W +G +
Sbjct: 193 LWYRPPELLLGERDY-GPPIDLWGAGCIM 220
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 111/209 (53%), Gaps = 14/209 (6%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVK-IFKKKKLQRIPNGEINVDREIRLLKM 94
+ KY +G+G++G+V + +T + A+K + + + + P I REI++L++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFP---ITALREIKILQL 73
Query: 95 LQHRNVIGLVDVF------VNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL 148
L+H NV+ L+++ N K +YL+ ++C L +L S KF + +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQ 132
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD--DTITTSQGS 206
LL+GL Y+H I+H+D+K N+L+T DG LK++DFG+A + + + + +
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 207 PVFQAPEIANGLPEISGYKVDIWSSGVTL 235
++ PE+ G + G +D+W +G +
Sbjct: 193 LWYRPPELLLGERDY-GPPIDLWGAGCIM 220
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 111/209 (53%), Gaps = 14/209 (6%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVK-IFKKKKLQRIPNGEINVDREIRLLKM 94
+ KY +G+G++G+V + +T + A+K + + + + P I REI++L++
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFP---ITALREIKILQL 72
Query: 95 LQHRNVIGLVDVF------VNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL 148
L+H NV+ L+++ N K +YL+ ++C L +L S KF + +
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQ 131
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD--DTITTSQGS 206
LL+GL Y+H I+H+D+K N+L+T DG LK++DFG+A + + + + +
Sbjct: 132 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 191
Query: 207 PVFQAPEIANGLPEISGYKVDIWSSGVTL 235
++ PE+ G + G +D+W +G +
Sbjct: 192 LWYRPPELLLGERDY-GPPIDLWGAGCIM 219
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 106/216 (49%), Gaps = 37/216 (17%)
Query: 35 MIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR---L 91
++ +Y +G G+ G V D+ AVK KL R + + R R L
Sbjct: 22 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK-----KLSRPFQNQTHAKRAYRELVL 76
Query: 92 LKMLQHRNVIGLVDVFVNDKK----QKMYLIMEYCVGGLQDM----LDSTPYKKFPIWQA 143
LK + H+N+I L++VF K Q +YL+ME L + LD +
Sbjct: 77 LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH---------ER 127
Query: 144 HGYFL-QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAE-SLDMFLHDDTIT 201
Y L Q+L G+++LHS GIIH+D+KP N+++ D TLKI DFG+A + F+ +
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV 187
Query: 202 TSQGSPVFQAPEIANGLPEISGY--KVDIWSSGVTL 235
T ++APE+ G+ GY VDIWS G +
Sbjct: 188 TR----YYRAPEVILGM----GYAANVDIWSVGCIM 215
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 35 MIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKM 94
M+ KY +GEGSYG V + + +T A+K F + + P + REIR+LK
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLES--EDDPVIKKIALREIRMLKQ 58
Query: 95 LQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDG 153
L+H N++ L++VF +K++++L+ EYC + LD Y++ P Q L
Sbjct: 59 LKHPNLVNLLEVF--RRKRRLHLVFEYCDHTVLHELDR--YQRGVPEHLVKSITWQTLQA 114
Query: 154 LEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL--DMFLHDDTITTSQGSPVFQA 211
+ + H IH+D+KP N+L+T +K+ DFG A L +DD + T +++
Sbjct: 115 VNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRW----YRS 170
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE+ G + G VD+W+ G
Sbjct: 171 PELLVGDTQY-GPPVDVWAIGCVF 193
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y + +LG+GS+G+V + D T AVK+ K + I RE+ LLK L H
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL--REVELLKKLDH 80
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDST-PYKKFPIWQAHGYFLQLLDGLEY 156
N++ L ++ + Y++ E GG ++ D K+F A Q+ G+ Y
Sbjct: 81 PNIMKLFEIL--EDSSSFYIVGELYTGG--ELFDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 157 LHSQGIIHKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
+H I+H+D+KP N+LL D +KI DFG++ F + + G+ + APE
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC---FQQNTKMKDRIGTAYYIAPE 193
Query: 214 IANGLPEISGYKVDIWSSGVTL 235
+ G + K D+WS+GV L
Sbjct: 194 VLRGTYD---EKCDVWSAGVIL 212
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 102/204 (50%), Gaps = 24/204 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
Y + + +G GSY K + T AVKI K K R P EI + LL+ QH
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK--RDPTEEIEI-----LLRYGQHP 76
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKF-PIWQAHGYFLQLLDGLEYL 157
N+I L DV+ D + +Y++ E GG ++LD +KF +A + +EYL
Sbjct: 77 NIITLKDVY--DDGKYVYVVTELMKGG--ELLDKILRQKFFSEREASAVLFTITKTVEYL 132
Query: 158 HSQGIIHKDIKPGNLLLTLDG----TLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
H+QG++H+D+KP N+L + +++I DFG A+ L + + T + F APE
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA--ENGLLMTPCYTANFVAPE 190
Query: 214 IANGLPEISGY--KVDIWSSGVTL 235
+ E GY DIWS GV L
Sbjct: 191 VL----ERQGYDAACDIWSLGVLL 210
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
++ Y + + +G GSY K + T AVKI K K R P EI + LL
Sbjct: 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK--RDPTEEIEI-----LL 70
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKF-PIWQAHGYFLQLL 151
+ QH N+I L DV+ D + +Y++ E GG ++LD +KF +A +
Sbjct: 71 RYGQHPNIITLKDVY--DDGKYVYVVTELXKGG--ELLDKILRQKFFSEREASAVLFTIT 126
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLTLDG----TLKISDFGVAESLDMFLHDDTITTSQGSP 207
+EYLH+QG++H+D+KP N+L + +++I DFG A+ L + + T +
Sbjct: 127 KTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA--ENGLLXTPCYTA 184
Query: 208 VFQAPEIANGLPEISGY--KVDIWSSGVTL 235
F APE+ E GY DIWS GV L
Sbjct: 185 NFVAPEVL----ERQGYDAACDIWSLGVLL 210
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 20/200 (10%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 73
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQAHGYFLQLLDG 153
N++ L F + ++YLI+EY G LQ + KF + Y +L +
Sbjct: 74 NILRLYGYFHD--ATRVYLILEYAPRGEVYKELQKL------SKFDEQRTATYITELANA 125
Query: 154 LEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
L Y HS+ +IH+DIKP NLLL G LKI+DFG + + TT G+ + PE
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPE 181
Query: 214 IANGLPEISGYKVDIWSSGV 233
+ G + KVD+WS GV
Sbjct: 182 MIEG--RMHDEKVDLWSLGV 199
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y + +LG+GS+G+V + D T AVK+ K + I RE+ LLK L H
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL--REVELLKKLDH 80
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDST-PYKKFPIWQAHGYFLQLLDGLEY 156
N++ L ++ + Y++ E GG ++ D K+F A Q+ G+ Y
Sbjct: 81 PNIMKLFEIL--EDSSSFYIVGELYTGG--ELFDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 157 LHSQGIIHKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
+H I+H+D+KP N+LL D +KI DFG++ F + + G+ + APE
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC---FQQNTKMKDRIGTAYYIAPE 193
Query: 214 IANGLPEISGYKVDIWSSGVTL 235
+ G + K D+WS+GV L
Sbjct: 194 VLRGTYD---EKCDVWSAGVIL 212
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y + +LG+GS+G+V + D T AVK+ K + I RE+ LLK L H
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL--REVELLKKLDH 80
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDST-PYKKFPIWQAHGYFLQLLDGLEY 156
N++ L ++ + Y++ E GG ++ D K+F A Q+ G+ Y
Sbjct: 81 PNIMKLFEIL--EDSSSFYIVGELYTGG--ELFDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 157 LHSQGIIHKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
+H I+H+D+KP N+LL D +KI DFG++ F + + G+ + APE
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC---FQQNTKMKDRIGTAYYIAPE 193
Query: 214 IANGLPEISGYKVDIWSSGVTL 235
+ G + K D+WS+GV L
Sbjct: 194 VLRGTYD---EKCDVWSAGVIL 212
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 69
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 70 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 125
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI+DFG + TT G+ + PE+ G
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWS----CHAPSSRRTTLSGTLDYLPPEMIEG 181
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 182 --RMHDEKVDLWSLGV 195
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 71
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 72 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 127
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI+DFG + DD T P PE+ G
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLP----PEMIEG 183
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 184 --RMHDEKVDLWSLGV 197
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 14/190 (7%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+GEGS G V + T + AVK +K QR E+ + E+ +++ H NV+ +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR---RELLFN-EVVIMRDYHHDNVVDMY 108
Query: 105 DVF-VNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
+ V D+ ++++ME+ GG + D + + Q L +L L YLH+QG+I
Sbjct: 109 SSYLVGDE---LWVVMEFLEGG--ALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVI 163
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
H+DIK ++LLT DG +K+SDFG + + G+P + APE+ + LP G
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV--GTPYWMAPEVISRLP--YG 219
Query: 224 YKVDIWSSGV 233
+VDIWS G+
Sbjct: 220 TEVDIWSLGI 229
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 24 VIYDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI 83
V+ D +T+K +Y+ G LG+G + K E+ D +T A K+ K L + P+ +
Sbjct: 34 VLVDPRTMK-----RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLK-PHQKE 87
Query: 84 NVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
+ EI + K L + +V+G F +D +Y+++E C + +L+ +K
Sbjct: 88 KMSTEIAIHKSLDNPHVVGFHGFFEDD--DFVYVVLEIC--RRRSLLELHKRRKAVTEPE 143
Query: 144 HGYFL-QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
YF+ Q + G++YLH+ +IH+D+K GNL L D +KI DFG+A ++ +
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE--FDGERKKX 201
Query: 203 SQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APE+ + ++VDIWS G L
Sbjct: 202 LCGTPNYIAPEVLCK--KGHSFEVDIWSLGCIL 232
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 99/200 (49%), Gaps = 20/200 (10%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 94
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQAHGYFLQLLDG 153
N++ L F + ++YLI+EY G LQ + KF + Y +L +
Sbjct: 95 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL------SKFDEQRTATYITELANA 146
Query: 154 LEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
L Y HS+ +IH+DIKP NLLL G LKI+DFG + DD T P PE
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLP----PE 202
Query: 214 IANGLPEISGYKVDIWSSGV 233
+ G + KVD+WS GV
Sbjct: 203 MIEG--RMHDEKVDLWSLGV 220
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 67
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 68 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 123
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI+DFG + + TT G+ + PE+ G
Sbjct: 124 HSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEG 179
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 180 --RMHDEKVDLWSLGV 193
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 71
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 72 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 127
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI+DFG + + TT G+ + PE+ G
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 184 --RMHDEKVDLWSLGV 197
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 71
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 72 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 127
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI+DFG + + TT G+ + PE+ G
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 184 --RMHDEKVDLWSLGV 197
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 12/194 (6%)
Query: 41 MGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNV 100
+G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H N+
Sbjct: 16 IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKA-GVEHQLRREVEIQSHLRHPNI 74
Query: 101 IGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHS 159
+ L F + ++YLI+EY +G + L +F + Y +L + L Y HS
Sbjct: 75 LRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SRFDEQRTATYITELANALSYCHS 130
Query: 160 QGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLP 219
+ +IH+DIKP NLLL +G LKI+DFG + + TT G+ + PE+ G
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEG-- 184
Query: 220 EISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 185 RMHDEKVDLWSLGV 198
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 73
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 74 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 129
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI+DFG + + TT G+ + PE+ G
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 186 --RMHDEKVDLWSLGV 199
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 85
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 86 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 141
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI+DFG + + TT G+ + PE+ G
Sbjct: 142 HSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEG 197
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 198 --RMHDEKVDLWSLGV 211
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 24 VIYDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI 83
V+ D +T+K +Y+ G LG+G + K E+ D +T A K+ K L + P+ +
Sbjct: 18 VLVDPRTMK-----RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLK-PHQKE 71
Query: 84 NVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
+ EI + K L + +V+G F +D +Y+++E C + +L+ +K
Sbjct: 72 KMSTEIAIHKSLDNPHVVGFHGFFEDD--DFVYVVLEIC--RRRSLLELHKRRKAVTEPE 127
Query: 144 HGYFL-QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
YF+ Q + G++YLH+ +IH+D+K GNL L D +KI DFG+A ++ +
Sbjct: 128 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE--FDGERKKD 185
Query: 203 SQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APE+ + ++VDIWS G L
Sbjct: 186 LCGTPNYIAPEVLCK--KGHSFEVDIWSLGCIL 216
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 68
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 69 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI+DFG + + TT G+ + PE+ G
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEG 180
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 181 --RMHDEKVDLWSLGV 194
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 20/200 (10%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 94
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQAHGYFLQLLDG 153
N++ L F + ++YLI+EY G LQ + KF + Y +L +
Sbjct: 95 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL------SKFDEQRTATYITELANA 146
Query: 154 LEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
L Y HS+ +IH+DIKP NLLL G LKI+DFG + + TT G+ + PE
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPE 202
Query: 214 IANGLPEISGYKVDIWSSGV 233
+ G + KVD+WS GV
Sbjct: 203 MIEG--RMHDEKVDLWSLGV 220
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 72
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 73 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 128
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI+DFG + + TT G+ + PE+ G
Sbjct: 129 HSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 185 --RMHDEKVDLWSLGV 198
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 24 VIYDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI 83
V+ D +T+K +Y+ G LG+G + K E+ D +T A K+ K L + P+ +
Sbjct: 34 VLVDPRTMK-----RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLK-PHQKE 87
Query: 84 NVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
+ EI + K L + +V+G F +D +Y+++E C + +L+ +K
Sbjct: 88 KMSTEIAIHKSLDNPHVVGFHGFFEDD--DFVYVVLEIC--RRRSLLELHKRRKAVTEPE 143
Query: 144 HGYFL-QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
YF+ Q + G++YLH+ +IH+D+K GNL L D +KI DFG+A ++ +
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE--FDGERKKD 201
Query: 203 SQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APE+ + ++VDIWS G L
Sbjct: 202 LCGTPNYIAPEVLCK--KGHSFEVDIWSLGCIL 232
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 109/237 (45%), Gaps = 51/237 (21%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
KY +G LG GS+G V E+ D E+ R A+K K+ + P + +RE+ ++K+L H
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALK-----KVLQDPRYK---NRELDIMKVLDH 59
Query: 98 RNVIGLVDVF-----------------------------------VNDKKQK-MYLIMEY 121
N+I LVD F VN + K + +IMEY
Sbjct: 60 VNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEY 119
Query: 122 CVGGLQDMLDS--TPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLL-TLDG 178
L +L S + P+ Y QL + ++HS GI H+DIKP NLL+ + D
Sbjct: 120 VPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDN 179
Query: 179 TLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
TLK+ DFG A+ L + + S ++APE+ G E + +D+WS G
Sbjct: 180 TLKLCDFGSAKKL---IPSEPSVAXICSRFYRAPELMLGATEYTP-SIDLWSIGCVF 232
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+G+GS+G+V + +D+ T A+KI L+ + ++ +EI +L V
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQ-DMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
++ D K+++IMEY GG D+L+ P + Q ++L GL+YLHS+ I
Sbjct: 92 GSYLKD--TKLWIIMEYLGGGSALDLLEPGPLDET---QIATILREILKGLDYLHSEKKI 146
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
H+DIK N+LL+ G +K++DFGVA L D + +T G+P + APE+ S
Sbjct: 147 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV---GTPFWMAPEVIKQ----S 199
Query: 223 GY--KVDIWSSGVT 234
Y K DIWS G+T
Sbjct: 200 AYDSKADIWSLGIT 213
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+G+GS+G+V + +D+ T A+KI L+ + ++ +EI +L V
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQ-DMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
++ D K+++IMEY GG D+L+ P + Q ++L GL+YLHS+ I
Sbjct: 72 GSYLKD--TKLWIIMEYLGGGSALDLLEPGPLDET---QIATILREILKGLDYLHSEKKI 126
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
H+DIK N+LL+ G +K++DFGVA L D + +T G+P + APE+ S
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV---GTPFWMAPEVIKQ----S 179
Query: 223 GY--KVDIWSSGVT 234
Y K DIWS G+T
Sbjct: 180 AYDSKADIWSLGIT 193
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPN-GEINVDREIRLLKMLQH 97
Y + +++G+G++ V+ ++ ET + AVKI K P ++ RE + ML+H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGG---LQDMLDSTPYKKFPIWQAHGYFLQLLDGL 154
+++ L++ + +D +Y++ E+ G + + + + A Y Q+L+ L
Sbjct: 86 PHIVELLETYSSDGM--LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 155 EYLHSQGIIHKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQ-GSPVFQ 210
Y H IIH+D+KP N+LL +K+ DFGVA L + + G+P F
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG---ESGLVAGGRVGTPHFM 200
Query: 211 APEIANGLPEISGYKVDIWSSGVTL 235
APE+ P G VD+W GV L
Sbjct: 201 APEVVKREP--YGKPVDVWGCGVIL 223
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 30/218 (13%)
Query: 35 MIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEIN------VDRE 88
M Y + + GSYG V +DSE + ++F R N + V RE
Sbjct: 20 MQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLRE 79
Query: 89 IRLLKMLQHRNVIGLVDVFVNDKK---QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAH- 144
IRLL H N++GL D+FV+ ++ K+YL+ E L ++ ++ I H
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD---QRIVISPQHI 136
Query: 145 GYFL-QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTS 203
YF+ +L GL LH G++H+D+ PGN+LL + + I DF +A +DT +
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-------EDTADAN 189
Query: 204 QGSPV----FQAPEIANGLPEISGYK--VDIWSSGVTL 235
+ V ++APE+ + + G+ VD+WS+G +
Sbjct: 190 KTHYVTHRWYRAPEL---VMQFKGFTKLVDMWSAGCVM 224
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + + A+K+ K +L++ E + RE+ + L+H
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 65
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 66 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 121
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI+DFG + + TT G+ + PE+ G
Sbjct: 122 HSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEG 177
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 178 --RMHDEKVDLWSLGV 191
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 30/218 (13%)
Query: 35 MIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEIN------VDRE 88
M Y + + GSYG V +DSE + ++F R N + V RE
Sbjct: 20 MQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLRE 79
Query: 89 IRLLKMLQHRNVIGLVDVFVNDKK---QKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAH- 144
IRLL H N++GL D+FV+ ++ K+YL+ E L ++ ++ I H
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD---QRIVISPQHI 136
Query: 145 GYFL-QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTS 203
YF+ +L GL LH G++H+D+ PGN+LL + + I DF +A +DT +
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-------EDTADAN 189
Query: 204 QGSPV----FQAPEIANGLPEISGYK--VDIWSSGVTL 235
+ V ++APE+ + + G+ VD+WS+G +
Sbjct: 190 KTHYVTHRWYRAPEL---VMQFKGFTKLVDMWSAGCVM 224
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%)
Query: 27 DNKTIKVKM-IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
+ ++++K+ I +++ +LG+GS+GKV +T A+K KK + + E +
Sbjct: 6 ERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTM 65
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHG 145
+ L +H + + F K+ ++ +MEY GG M KF + +A
Sbjct: 66 VEKRVLSLAWEHPFLTHMFCTF--QTKENLFFVMEYLNGG-DLMYHIQSCHKFDLSRATF 122
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
Y +++ GL++LHS+GI+++D+K N+LL DG +KI+DFG+ + + L D G
Sbjct: 123 YAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCG 180
Query: 206 SPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+P + APEI G + + VD WS GV L
Sbjct: 181 TPDYIAPEILLG--QKYNHSVDWWSFGVLL 208
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 18/208 (8%)
Query: 37 GKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML- 95
G + + +L+G G+YG+V + +T A+K+ + + E + +EI +LK
Sbjct: 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKV-----MDVTGDEEEEIKQEINMLKKYS 78
Query: 96 QHRNVIGLVDVFVNDKKQKM----YLIMEYC-VGGLQDMLDSTPYKKF-PIWQAHGYFLQ 149
HRN+ F+ M +L+ME+C G + D++ +T W A+ +
Sbjct: 79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY-ICRE 137
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
+L GL +LH +IH+DIK N+LLT + +K+ DFGV+ LD + T G+P +
Sbjct: 138 ILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYW 195
Query: 210 QAPEI--ANGLPEIS-GYKVDIWSSGVT 234
APE+ + P+ + +K D+WS G+T
Sbjct: 196 MAPEVIACDENPDATYDFKSDLWSLGIT 223
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 34 KMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKL-QRIPNGEINVDREIRLL 92
+++ Y + + +G G + KVK T A+KI K L +P + EI L
Sbjct: 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPR----IKTEIEAL 62
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLL 151
K L+H+++ L V + K+++++EYC GG L D + S + + F Q++
Sbjct: 63 KNLRHQHICQLYHVL--ETANKIFMVLEYCPGGELFDYIISQ--DRLSEEETRVVFRQIV 118
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
+ Y+HSQG H+D+KP NLL LK+ DFG+ D + T GS + A
Sbjct: 119 SAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN-KDYHLQTCCGSLAYAA 177
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE+ G + G + D+WS G+ L
Sbjct: 178 PELIQGKSYL-GSEADVWSMGILL 200
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 20/208 (9%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
Y + +++G G+ V+ + + A+K + L++ + +EI+ + H
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIK---RINLEKCQTSMDELLKEIQAMSQCHHP 68
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQA--HGYFLQLL 151
N++ FV K +++L+M+ GG ++ ++ +K + ++ ++L
Sbjct: 69 NIVSYYTSFVV--KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDM---FLHDDTITTSQGSPV 208
+GLEYLH G IH+D+K GN+LL DG+++I+DFGV+ L + T G+P
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 209 FQAPEIANGLPEISGY--KVDIWSSGVT 234
+ APE+ + ++ GY K DIWS G+T
Sbjct: 187 WMAPEV---MEQVRGYDFKADIWSFGIT 211
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 20/208 (9%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
Y + +++G G+ V+ + + A+K + L++ + +EI+ + H
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIK---RINLEKCQTSMDELLKEIQAMSQCHHP 73
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQA--HGYFLQLL 151
N++ FV K +++L+M+ GG ++ ++ +K + ++ ++L
Sbjct: 74 NIVSYYTSFVV--KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDM---FLHDDTITTSQGSPV 208
+GLEYLH G IH+D+K GN+LL DG+++I+DFGV+ L + T G+P
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 209 FQAPEIANGLPEISGY--KVDIWSSGVT 234
+ APE+ + ++ GY K DIWS G+T
Sbjct: 192 WMAPEV---MEQVRGYDFKADIWSFGIT 216
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 71
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 72 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 127
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI++FG + + TT G+ + PE+ G
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIANFGWS----VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 184 --RMHDEKVDLWSLGV 197
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 70
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 71 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 126
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI++FG + + TT G+ + PE+ G
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIANFGWS----VHAPSSRRTTLCGTLDYLPPEMIEG 182
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 183 --RMHDEKVDLWSLGV 196
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
Y ++G GS+G V + LC + KK LQ G+ +RE+++++ L H
Sbjct: 22 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHC 73
Query: 99 NVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQLLD 152
N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S ++A
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRA 190
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE+ G + + +D+WS+G L
Sbjct: 191 PELIFGATDYTS-SIDVWSAGCVL 213
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 69
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 70 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 125
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI+DFG + D T G+ + PE+ G
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----TLCGTLDYLPPEMIEG 181
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 182 --RMHDEKVDLWSLGV 195
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 73
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 74 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 129
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI+DFG + + TT G+ + PE G
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEXIEG 185
Query: 218 LPEISGYKVDIWSSGV 233
KVD+WS GV
Sbjct: 186 --RXHDEKVDLWSLGV 199
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 22/216 (10%)
Query: 26 YDNKTIKVKMIGKYVMGDLL---GEGSYGKVKEMLDSETLCRRAVKIFKKKKLQR-IPNG 81
Y + ++VK Y D+L G G++G V ++ T ++F K + P
Sbjct: 37 YVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKAT-----GRVFVAKFINTPYPLD 91
Query: 82 EINVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIW 141
+ V EI ++ L H +I L D F + K +M LI+E+ GG ++ D + + +
Sbjct: 92 KYTVKNEISIMNQLHHPKLINLHDAF--EDKYEMVLILEFLSGG--ELFDRIAAEDYKMS 147
Query: 142 QAH--GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD--GTLKISDFGVAESLDMFLHD 197
+A Y Q +GL+++H I+H DIKP N++ ++KI DFG+A L+ D
Sbjct: 148 EAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP---D 204
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGV 233
+ + + + F APEI + P G+ D+W+ GV
Sbjct: 205 EIVKVTTATAEFAAPEIVDREP--VGFYTDMWAIGV 238
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 12/194 (6%)
Query: 41 MGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNV 100
+G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H N+
Sbjct: 16 IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKA-GVEHQLRREVEIQSHLRHPNI 74
Query: 101 IGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHS 159
+ L F + ++YLI+EY +G + L +F + Y +L + L Y HS
Sbjct: 75 LRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SRFDEQRTATYITELANALSYCHS 130
Query: 160 QGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLP 219
+ +IH+DIKP NLLL +G LKI+DFG + D T G+ + PE+ G
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD----TLCGTLDYLPPEMIEG-- 184
Query: 220 EISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 185 RMHDEKVDLWSLGV 198
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 35 MIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKM 94
++ Y + + LG G++G V + + T A K + + + V +EI+ + +
Sbjct: 49 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV----MTPHESDKETVRKEIQTMSV 104
Query: 95 LQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQLLD 152
L+H ++ L D F +D +M +I E+ GG + + D + K +A Y Q+
Sbjct: 105 LRHPTLVNLHDAFEDD--NEMVMIYEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCK 160
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTL--DGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
GL ++H +H D+KP N++ T LK+ DFG+ LD ++ + G+ F
Sbjct: 161 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP---KQSVKVTTGTAEFA 217
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
APE+A G P GY D+WS GV
Sbjct: 218 APEVAEGKP--VGYYTDMWSVGV 238
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 68
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 69 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI+DFG + D T P PE+ G
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP----PEMIEG 180
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 181 --RMHDEKVDLWSLGV 194
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 16/198 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 68
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 69 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPEIA 215
HS+ +IH+DIKP NLLL G LKI+DFG + +H + ++ G+ + PE+
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTELCGTLDYLPPEMI 178
Query: 216 NGLPEISGYKVDIWSSGV 233
G + KVD+WS GV
Sbjct: 179 EG--RMHDEKVDLWSLGV 194
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 69
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 70 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 125
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI+DFG + D T P PE+ G
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP----PEMIEG 181
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 182 --RMHDEKVDLWSLGV 195
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 68
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 69 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI+DFG + D T P PE+ G
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP----PEMIEG 180
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 181 --RMHDEKVDLWSLGV 194
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 103/195 (52%), Gaps = 21/195 (10%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+G+GS+G+V + +D+ T A+KI L+ + ++ +EI +L V
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQ-DMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
++ D K+++IMEY GG D+L+ P + Q ++L GL+YLHS+ I
Sbjct: 72 GSYLKD--TKLWIIMEYLGGGSALDLLEPGPLDET---QIATILREILKGLDYLHSEKKI 126
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPEIANGLPEI 221
H+DIK N+LL+ G +K++DFGVA L D I + G+P + APE+
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQLT----DTQIKRNXFVGTPFWMAPEVIKQ---- 178
Query: 222 SGY--KVDIWSSGVT 234
S Y K DIWS G+T
Sbjct: 179 SAYDSKADIWSLGIT 193
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 100/197 (50%), Gaps = 15/197 (7%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
+LG+G+YG V D R A+K +R + EI L K L+H+N++
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIP----ERDSRYSQPLHEEIALHKHLKHKNIVQY 70
Query: 104 VDVFVNDKKQKMYLIMEYCVGG-LQDMLDST--PYKKFPIWQAHGYFL-QLLDGLEYLHS 159
+ F + K++ ME GG L +L S P K Q G++ Q+L+GL+YLH
Sbjct: 71 LGSFSENGFIKIF--MEQVPGGSLSALLRSKWGPLKDNE--QTIGFYTKQILEGLKYLHD 126
Query: 160 QGIIHKDIKPGNLLL-TLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGL 218
I+H+DIK N+L+ T G LKISDFG ++ L + T G+ + APEI +
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI--NPCTETFTGTLQYMAPEIIDKG 184
Query: 219 PEISGYKVDIWSSGVTL 235
P G DIWS G T+
Sbjct: 185 PRGYGKAADIWSLGCTI 201
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 103/195 (52%), Gaps = 21/195 (10%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+G+GS+G+V + +D+ T A+KI L+ + ++ +EI +L V
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQ-DMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
++ D K+++IMEY GG D+L+ P + Q ++L GL+YLHS+ I
Sbjct: 87 GSYLKD--TKLWIIMEYLGGGSALDLLEPGPLDET---QIATILREILKGLDYLHSEKKI 141
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPEIANGLPEI 221
H+DIK N+LL+ G +K++DFGVA L D I + G+P + APE+
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVAGQLT----DTQIKRNXFVGTPFWMAPEVIKQ---- 193
Query: 222 SGY--KVDIWSSGVT 234
S Y K DIWS G+T
Sbjct: 194 SAYDSKADIWSLGIT 208
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 102/196 (52%), Gaps = 20/196 (10%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+G G++G + M D L + V + K ++R + NV REI + L+H N++
Sbjct: 28 IGSGNFGVARLMRDK--LTKELVAV---KYIERGAAIDENVQREIINHRSLRHPNIVRFK 82
Query: 105 DVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
+V + + +IMEY GG L + + + +F +A +F QLL G+ Y HS I
Sbjct: 83 EVILT--PTHLAIIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQIC 138
Query: 164 HKDIKPGNLLLTLDGT----LKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLP 219
H+D+K N L LDG+ LKI DFG ++S LH +T G+P + APE+
Sbjct: 139 HRDLKLENTL--LDGSPAPRLKICDFGYSKS--SVLHSQPKSTV-GTPAYIAPEVLLRQ- 192
Query: 220 EISGYKVDIWSSGVTL 235
E G D+WS GVTL
Sbjct: 193 EYDGKIADVWSCGVTL 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 68
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 69 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI+DFG + + T G+ + PE+ G
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTXLCGTLDYLPPEMIEG 180
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 181 --RMHDEKVDLWSLGV 194
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 73
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 74 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 129
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
HS+ +IH+DIKP NLLL G LKI+DFG + D T P PE+ G
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP----PEMIEG 185
Query: 218 LPEISGYKVDIWSSGV 233
+ KVD+WS GV
Sbjct: 186 --RMHDEKVDLWSLGV 199
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 19/200 (9%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
Y+ D LGEG+Y V + T A+K + + + P I RE+ LLK L+H
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI---REVSLLKDLKHA 60
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHG---YFLQLLDGLE 155
N++ L D+ +K + L+ EY L+ LD I H + QLL GL
Sbjct: 61 NIVTLHDIIHTEKS--LTLVFEYLDKDLKQYLDDCG----NIINMHNVKLFLFQLLRGLA 114
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGV--AESLDMFLHDDTITTSQGSPVFQAPE 213
Y H Q ++H+D+KP NLL+ G LK++DFG+ A+S+ +D+ + T P P+
Sbjct: 115 YCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRP----PD 170
Query: 214 IANGLPEISGYKVDIWSSGV 233
I G + S ++D+W G
Sbjct: 171 ILLGSTDYST-QIDMWGVGC 189
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 100/197 (50%), Gaps = 15/197 (7%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
+LG+G+YG V D R A+K +R + EI L K L+H+N++
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIP----ERDSRYSQPLHEEIALHKHLKHKNIVQY 84
Query: 104 VDVFVNDKKQKMYLIMEYCVGG-LQDMLDST--PYKKFPIWQAHGYFL-QLLDGLEYLHS 159
+ F + K++ ME GG L +L S P K Q G++ Q+L+GL+YLH
Sbjct: 85 LGSFSENGFIKIF--MEQVPGGSLSALLRSKWGPLKDNE--QTIGFYTKQILEGLKYLHD 140
Query: 160 QGIIHKDIKPGNLLL-TLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGL 218
I+H+DIK N+L+ T G LKISDFG ++ L + T G+ + APEI +
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI--NPCTETFTGTLQYMAPEIIDKG 198
Query: 219 PEISGYKVDIWSSGVTL 235
P G DIWS G T+
Sbjct: 199 PRGYGKAADIWSLGCTI 215
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
Y + + LG G++G V + + T A K + + + V +EI+ + +L+H
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFV----MTPHESDKETVRKEIQTMSVLRHP 214
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQLLDGLEY 156
++ L D F +D +M +I E+ GG + + D + K +A Y Q+ GL +
Sbjct: 215 TLVNLHDAFEDD--NEMVMIYEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCH 270
Query: 157 LHSQGIIHKDIKPGNLLLTL--DGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
+H +H D+KP N++ T LK+ DFG+ LD ++ + G+ F APE+
Sbjct: 271 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP---KQSVKVTTGTAEFAAPEV 327
Query: 215 ANGLPEISGYKVDIWSSGV 233
A G P GY D+WS GV
Sbjct: 328 AEGKP--VGYYTDMWSVGV 344
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 114/216 (52%), Gaps = 32/216 (14%)
Query: 35 MIGK-----YVMGDLLGEGSYGKVKEMLDSETLCRRAVK-IF-----KKKKLQRIPNGEI 83
MIGK Y + D LG G V D+ + A+K IF K++ L+R
Sbjct: 4 MIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRF----- 58
Query: 84 NVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVG-GLQDMLDSTPYKKFPIWQ 142
+RE+ L H+N++ ++DV +++ YL+MEY G L + ++S + +
Sbjct: 59 --EREVHNSSQLSHQNIVSMIDV--DEEDDCYYLVMEYIEGPTLSEYIES--HGPLSVDT 112
Query: 143 AHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
A + Q+LDG+++ H I+H+DIKP N+L+ + TLKI DFG+A++L + ++T
Sbjct: 113 AINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS----ETSLTQ 168
Query: 203 SQ---GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ G+ + +PE A G E + DI+S G+ L
Sbjct: 169 TNHVLGTVQYFSPEQAKG--EATDECTDIYSIGIVL 202
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 41/219 (18%)
Query: 44 LLGEGSYGKV---KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNV 100
+LG+G++G+V + LDS + + KK++ + E+ LL L H+ V
Sbjct: 13 VLGQGAFGQVVKARNALDS--------RYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 101 IGLVDVFVN-----------DKKQKMYLIMEYCVGG-LQDMLDSTPY--KKFPIWQAHGY 146
+ ++ KK +++ MEYC G L D++ S ++ W+
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL--- 121
Query: 147 FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAE----SLDMFLHD----- 197
F Q+L+ L Y+HSQGIIH+D+KP N+ + +KI DFG+A+ SLD+ D
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 198 ---DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGV 233
D +T++ G+ ++ A E+ +G + K+D++S G+
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNE-KIDMYSLGI 219
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
K Y + + LG+G++ V+ + T A KI KKL ++RE R+
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKLEREARIC 58
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQL 150
+ LQH N++ L D ++ YL+ + GG +D++ Y + A Q+
Sbjct: 59 RKLQHPNIVRLHDSI--QEESFHYLVFDLVTGGELFEDIVAREFYSEA---DASHCIQQI 113
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD---GTLKISDFGVAESLDMFLHDDTITTSQGSP 207
L+ + Y HS GI+H+++KP NLLL +K++DFG+A ++ + G+P
Sbjct: 114 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN---DSEAWHGFAGTP 170
Query: 208 VFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ +PE+ P VDIW+ GV L
Sbjct: 171 GYLSPEVLKKDP--YSKPVDIWACGVIL 196
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
K Y + + LG+G++ V+ + T A KI KKL ++RE R+
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKLEREARIC 59
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQL 150
+ LQH N++ L D ++ YL+ + GG +D++ Y + A Q+
Sbjct: 60 RKLQHPNIVRLHDSI--QEESFHYLVFDLVTGGELFEDIVAREFYSEA---DASHCIQQI 114
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD---GTLKISDFGVAESLDMFLHDDTITTSQGSP 207
L+ + Y HS GI+H+++KP NLLL +K++DFG+A ++ + G+P
Sbjct: 115 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN---DSEAWHGFAGTP 171
Query: 208 VFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ +PE+ P VDIW+ GV L
Sbjct: 172 GYLSPEVLKKDP--YSKPVDIWACGVIL 197
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 68
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 69 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPEIA 215
HS+ +IH+DIKP NLLL G LKI+DFG + +H + + G+ + PE+
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRAALCGTLDYLPPEMI 178
Query: 216 NGLPEISGYKVDIWSSGV 233
G + KVD+WS GV
Sbjct: 179 EG--RMHDEKVDLWSLGV 194
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 8/210 (3%)
Query: 27 DNKTIKVKM-IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
+ ++++K+ I + + +LG+GS+GKV +T A+K KK + + E +
Sbjct: 7 ERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTM 66
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHG 145
+ L +H + + F K+ ++ +MEY GG M KF + +A
Sbjct: 67 VEKRVLSLAWEHPFLTHMFCTF--QTKENLFFVMEYLNGG-DLMYHIQSCHKFDLSRATF 123
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
Y +++ GL++LHS+GI+++D+K N+LL DG +KI+DFG+ + + L D G
Sbjct: 124 YAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCG 181
Query: 206 SPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+P + APEI G + + VD WS GV L
Sbjct: 182 TPDYIAPEILLG--QKYNHSVDWWSFGVLL 209
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 71
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 72 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 127
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPEIA 215
HS+ +IH+DIKP NLLL G LKI+DFG + +H + + G+ + PE+
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRAALCGTLDYLPPEMI 181
Query: 216 NGLPEISGYKVDIWSSGV 233
G + KVD+WS GV
Sbjct: 182 EG--RMHDEKVDLWSLGV 197
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 19/193 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG G+ V T A+K+ KK ++I V EI +L L H N+I L
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI------VRTEIGVLLRLSHPNIIKLK 114
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQ-AHGYFLQLLDGLEYLHSQGII 163
++F + ++ L++E GG ++ D K + + A Q+L+ + YLH GI+
Sbjct: 115 EIF--ETPTEISLVLELVTGG--ELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIV 170
Query: 164 HKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPE 220
H+D+KP NLL D LKI+DFG+++ ++ H + T G+P + APEI G
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVE---HQVLMKTVCGTPGYCAPEILRGC-- 225
Query: 221 ISGYKVDIWSSGV 233
G +VD+WS G+
Sbjct: 226 AYGPEVDMWSVGI 238
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 43 DLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIG 102
D +G+GS+G+V + +D+ T A+KI L+ + ++ +EI +L +
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSPYITR 81
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQ-DMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
++ K K+++IMEY GG D+L P ++ I ++L GL+YLHS+
Sbjct: 82 YFGSYL--KSTKLWIIMEYLGGGSALDLLKPGPLEETYI---ATILREILKGLDYLHSER 136
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPEIANGLP 219
IH+DIK N+LL+ G +K++DFGVA L D I + G+P + APE+
Sbjct: 137 KIHRDIKAANVLLSEQGDVKLADFGVAGQLT----DTQIKRNXFVGTPFWMAPEVIKQ-- 190
Query: 220 EISGYKVDIWSSGVT 234
+K DIWS G+T
Sbjct: 191 SAYDFKADIWSLGIT 205
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 20/200 (10%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 73
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQAHGYFLQLLDG 153
N++ L F + ++YLI+EY G LQ + KF + Y +L +
Sbjct: 74 NILRLYGYFHD--ATRVYLILEYAPRGEVYKELQKL------SKFDEQRTATYITELANA 125
Query: 154 LEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
L Y HS+ +IH+DIKP NLLL G LKI+DFG + + G+ + PE
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRXXLXGTLDYLPPE 181
Query: 214 IANGLPEISGYKVDIWSSGV 233
+ G + KVD+WS GV
Sbjct: 182 MIEG--RMHDEKVDLWSLGV 199
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
K Y + + LG+G++ V+ + T A KI KKL ++RE R+
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKLEREARIC 59
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQL 150
+ LQH N++ L D ++ YL+ + GG +D++ Y + A Q+
Sbjct: 60 RKLQHPNIVRLHDSI--QEESFHYLVFDLVTGGELFEDIVAREFYSEA---DASHCIQQI 114
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD---GTLKISDFGVAESLDMFLHDDTITTSQGSP 207
L+ + Y HS GI+H+++KP NLLL +K++DFG+A ++ + G+P
Sbjct: 115 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN---DSEAWHGFAGTP 171
Query: 208 VFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ +PE+ P VDIW+ GV L
Sbjct: 172 GYLSPEVLKKDP--YSKPVDIWACGVIL 197
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 16/198 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + + A+K+ K +L++ E + RE+ + L+H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 68
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 69 NILRLYGYFHDS--TRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPEIA 215
HS+ +IH+DIKP NLLL G LKI+DFG + +H + + G+ + PE+
Sbjct: 125 HSKKVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRAALCGTLDYLPPEMI 178
Query: 216 NGLPEISGYKVDIWSSGV 233
G + KVD+WS GV
Sbjct: 179 EG--RMHDEKVDLWSLGV 194
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
Y ++G GS+G V + LC + KK LQ G+ +RE+++++ L H
Sbjct: 22 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHC 73
Query: 99 NVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQLLD 152
N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S ++A
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRA 190
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE+ G + + +D+WS+G L
Sbjct: 191 PELIFGATDYTS-SIDVWSAGCVL 213
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
Y ++G GS+G V + LC + KK LQ G+ +RE+++++ L H
Sbjct: 22 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHC 73
Query: 99 NVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQLLD 152
N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S ++A
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRA 190
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE+ G + + +D+WS+G L
Sbjct: 191 PELIFGATDYTS-SIDVWSAGCVL 213
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
K Y + + LG+G++ V+ + T A KI KKL ++RE R+
Sbjct: 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKLEREARIC 82
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQL 150
+ LQH N++ L D ++ YL+ + GG +D++ Y + A Q+
Sbjct: 83 RKLQHPNIVRLHDSI--QEESFHYLVFDLVTGGELFEDIVAREFYSEA---DASHCIQQI 137
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD---GTLKISDFGVAESLDMFLHDDTITTSQGSP 207
L+ + Y HS GI+H+++KP NLLL +K++DFG+A ++ + G+P
Sbjct: 138 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN---DSEAWHGFAGTP 194
Query: 208 VFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ +PE+ P VDIW+ GV L
Sbjct: 195 GYLSPEVLKKDP--YSKPVDIWACGVIL 220
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 27/210 (12%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG------EINVDREIRL 91
+Y + + +G G+YG V T + A+K +IPN RE+++
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIK--------KIPNAFDVVTNAKRTLRELKI 106
Query: 92 LKMLQHRNVIGLVDVFVND----KKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAH-GY 146
LK +H N+I + D+ + + +Y++++ L ++ S+ P+ H Y
Sbjct: 107 LKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ----PLTLEHVRY 162
Query: 147 FL-QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL--DMFLHDDTITTS 203
FL QLL GL+Y+HS +IH+D+KP NLL+ + LKI DFG+A L H +T
Sbjct: 163 FLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY 222
Query: 204 QGSPVFQAPEIANGLPEISGYKVDIWSSGV 233
+ ++APE+ L E + +D+WS G
Sbjct: 223 VATRWYRAPELMLSLHEYTQ-AIDLWSVGC 251
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 14/190 (7%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+GEGS G V + AVK +K QR E+ + E+ +++ QH NV+ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFN-EVVIMRDYQHENVVEMY 83
Query: 105 DVF-VNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
+ + V D+ ++++ME+ GG + D + + Q L +L L LH+QG+I
Sbjct: 84 NSYLVGDE---LWVVMEFLEGG--ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 138
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
H+DIK ++LLT DG +K+SDFG + + G+P + APE+ + LP G
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPELISRLP--YG 194
Query: 224 YKVDIWSSGV 233
+VDIWS G+
Sbjct: 195 PEVDIWSLGI 204
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 16/198 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 70
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 71 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 126
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPEIA 215
HS+ +IH+DIKP NLLL G LKI+DFG + +H + G+ + PE+
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRXXLCGTLDYLPPEMI 180
Query: 216 NGLPEISGYKVDIWSSGV 233
G + KVD+WS GV
Sbjct: 181 EG--RMHDEKVDLWSLGV 196
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 16/198 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 71
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 72 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 127
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPEIA 215
HS+ +IH+DIKP NLLL G LKI+DFG + +H + G+ + PE+
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRXXLCGTLDYLPPEMI 181
Query: 216 NGLPEISGYKVDIWSSGV 233
G + KVD+WS GV
Sbjct: 182 EG--RMHDEKVDLWSLGV 197
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+GEGS G V + + + AVK+ +K QR E+ + E+ +++ QH NV+ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR---RELLFN-EVVIMRDYQHFNVVEMY 108
Query: 105 DVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
++ ++++++ME+ GG L D++ + I LQ L YLH+QG+I
Sbjct: 109 KSYLVG--EELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQ---ALAYLHAQGVI 163
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
H+DIK ++LLTLDG +K+SDFG + + G+P + APE+ + +
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV--GTPYWMAPEVISR--SLYA 219
Query: 224 YKVDIWSSGV 233
+VDIWS G+
Sbjct: 220 TEVDIWSLGI 229
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 14/190 (7%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+GEGS G V + AVK +K QR E+ + E+ +++ QH NV+ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFN-EVVIMRDYQHENVVEMY 87
Query: 105 DVF-VNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
+ + V D+ ++++ME+ GG + D + + Q L +L L LH+QG+I
Sbjct: 88 NSYLVGDE---LWVVMEFLEGG--ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 142
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
H+DIK ++LLT DG +K+SDFG + + G+P + APE+ + LP G
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPELISRLP--YG 198
Query: 224 YKVDIWSSGV 233
+VDIWS G+
Sbjct: 199 PEVDIWSLGI 208
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
I + +G LG+G +G V + + A+K+ K +L++ E + REI + L
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK-EGVEHQLRREIEIQSHL 72
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
+H N++ + + F +D+K ++YL++E+ G + + + +F ++ + +L D L
Sbjct: 73 RHPNILRMYNYF-HDRK-RIYLMLEFAPRG-ELYKELQKHGRFDEQRSATFMEELADALH 129
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPE 213
Y H + +IH+DIKP NLL+ G LKI+DFG + +H ++ G+ + PE
Sbjct: 130 YCHERKVIHRDIKPENLLMGYKGELKIADFGWS------VHAPSLRRRXMCGTLDYLPPE 183
Query: 214 IANGLPEISGYKVDIWSSGV 233
+ G + KVD+W +GV
Sbjct: 184 MIEG--KTHDEKVDLWCAGV 201
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 14/190 (7%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+GEGS G V + AVK +K QR E+ + E+ +++ QH NV+ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFN-EVVIMRDYQHENVVEMY 92
Query: 105 DVF-VNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
+ + V D+ ++++ME+ GG + D + + Q L +L L LH+QG+I
Sbjct: 93 NSYLVGDE---LWVVMEFLEGG--ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 147
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
H+DIK ++LLT DG +K+SDFG + + G+P + APE+ + LP G
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPELISRLP--YG 203
Query: 224 YKVDIWSSGV 233
+VDIWS G+
Sbjct: 204 PEVDIWSLGI 213
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 16/198 (8%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ +G LG+G +G V + ++ A+K+ K +L++ E + RE+ + L+H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSHLRHP 68
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N++ L F + ++YLI+EY +G + L KF + Y +L + L Y
Sbjct: 69 NILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPEIA 215
HS+ +IH+DIKP NLLL G LKI+DFG + +H + G+ + PE+
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRXXLCGTLDYLPPEMI 178
Query: 216 NGLPEISGYKVDIWSSGV 233
G + KVD+WS GV
Sbjct: 179 EG--RMHDEKVDLWSLGV 194
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
I + +G LG+G +G V + + A+K+ K +L++ E + REI + L
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK-EGVEHQLRREIEIQSHL 71
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
+H N++ + + F +D+K ++YL++E+ G + + + +F ++ + +L D L
Sbjct: 72 RHPNILRMYNYF-HDRK-RIYLMLEFAPRG-ELYKELQKHGRFDEQRSATFMEELADALH 128
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPE 213
Y H + +IH+DIKP NLL+ G LKI+DFG + +H ++ G+ + PE
Sbjct: 129 YCHERKVIHRDIKPENLLMGYKGELKIADFGWS------VHAPSLRRRXMCGTLDYLPPE 182
Query: 214 IANGLPEISGYKVDIWSSGV 233
+ G + KVD+W +GV
Sbjct: 183 MIEG--KTHDEKVDLWCAGV 200
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 14/190 (7%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+GEGS G V + AVK +K QR E+ + E+ +++ QH NV+ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFN-EVVIMRDYQHENVVEMY 94
Query: 105 DVF-VNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
+ + V D+ ++++ME+ GG + D + + Q L +L L LH+QG+I
Sbjct: 95 NSYLVGDE---LWVVMEFLEGG--ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 149
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
H+DIK ++LLT DG +K+SDFG + + G+P + APE+ + LP G
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPELISRLP--YG 205
Query: 224 YKVDIWSSGV 233
+VDIWS G+
Sbjct: 206 PEVDIWSLGI 215
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 22/204 (10%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y + +G G++G + M D +++ ++ K ++R NV REI + L+H
Sbjct: 20 RYELVKDIGSGNFGVARLMRD-----KQSNELVAVKYIERGEKIAANVKREIINHRSLRH 74
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
N++ +V + + ++MEY GG + + ++ +F +A +F QL+ G+
Sbjct: 75 PNIVRFKEVILT--PTHLAIVMEYASGGELFERICNAG---RFSEDEARFFFQQLISGVS 129
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT----LKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
Y H+ + H+D+K N L LDG+ LKI DFG ++S LH +T G+P + A
Sbjct: 130 YCHAMQVCHRDLKLENTL--LDGSPAPRLKICDFGYSKS--SVLHSQPKSTV-GTPAYIA 184
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE+ E G D+WS GVTL
Sbjct: 185 PEVLLK-KEYDGKVADVWSCGVTL 207
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 22/204 (10%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y + +G G++G + M D +++ ++ K ++R + NV REI + L+H
Sbjct: 19 RYELVKDIGSGNFGVARLMRD-----KQSNELVAVKYIERGEKIDENVKREIINHRSLRH 73
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
N++ +V + + ++MEY GG + + ++ +F +A +F QL+ G+
Sbjct: 74 PNIVRFKEVILT--PTHLAIVMEYASGGELFERICNA---GRFSEDEARFFFQQLISGVS 128
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT----LKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
Y H+ + H+D+K N L LDG+ LKI DFG ++S LH +T G+P + A
Sbjct: 129 YCHAMQVCHRDLKLENTL--LDGSPAPRLKICDFGYSKS--SVLHSQPKSTV-GTPAYIA 183
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE+ E G D+WS GVTL
Sbjct: 184 PEVLLK-KEYDGKVADVWSCGVTL 206
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 24/201 (11%)
Query: 45 LGEGSYGKVKE---MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+G G + +V +LD + + V+IF + + +EI LLK L H NVI
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK----ARADCIKEIDLLKQLNHPNVI 95
Query: 102 GLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKK--FPIWQAHGYFLQLLDGLEYLH 158
F+ D ++ +++E G L M+ +K P YF+QL LE++H
Sbjct: 96 KYYASFIED--NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPEI-- 214
S+ ++H+DIKP N+ +T G +K+ D G L F T G+P + +PE
Sbjct: 154 SRRVMHRDIKPANVFITATGVVKLGDLG----LGRFFSSKTTAAHSLVGTPYYMSPERIH 209
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
NG +K DIWS G L
Sbjct: 210 ENGY----NFKSDIWSLGCLL 226
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQR---IPNGEI-NVDREIRLLK 93
KY LG G++G V +D E VK KK+K+ I + ++ V EI +L
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 94 MLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQ--DMLDSTPYKKFPIWQAHGYFLQLL 151
++H N+I ++D+F N + L+ME GL +D P P+ A F QL+
Sbjct: 85 RVEHANIIKVLDIFEN--QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPL--ASYIFRQLV 140
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
+ YL + IIH+DIK N+++ D T+K+ DFG A L+ T G+ + A
Sbjct: 141 SAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE---RGKLFYTFCGTIEYCA 197
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE+ G P G ++++WS GVTL
Sbjct: 198 PEVLMGNP-YRGPELEMWSLGVTL 220
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 35/217 (16%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI---NVDREIRLLKMLQHRNVI 101
LG G +G V E + C A+K R+PN E+ V RE++ L L+H ++
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRI------RLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 102 GLVDVFV----------NDKKQKMYLIMEYCVG-GLQDMLD--STPYKKFPIWQAHGYFL 148
+ ++ + K +Y+ M+ C L+D ++ T ++ H FL
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH-IFL 125
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ---- 204
Q+ + +E+LHS+G++H+D+KP N+ T+D +K+ DFG+ ++D + T+ T
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 205 ------GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ ++ +PE +G +KVDI+S G+ L
Sbjct: 186 RHTGQVGTKLYMSPEQIHG--NSYSHKVDIFSLGLIL 220
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 90/163 (55%), Gaps = 17/163 (10%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR---EIRLLKM 94
+Y + L+G GSYG V E D L +R V I KK+ R+ I+ R EI +L
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDK--LEKRVVAI---KKILRVFEDLIDCKRILREIAILNR 108
Query: 95 LQHRNVIGLVDVFVN---DKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAH--GYFLQ 149
L H +V+ ++D+ + +K ++Y+++E + + + Y + + H
Sbjct: 109 LNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVY----LTELHIKTLLYN 164
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLD 192
LL G++Y+HS GI+H+D+KP N L+ D ++K+ DFG+A ++D
Sbjct: 165 LLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 14/190 (7%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+GEGS G V + AVK +K QR E+ + E+ +++ QH NV+ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFN-EVVIMRDYQHENVVEMY 137
Query: 105 DVF-VNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
+ + V D+ ++++ME+ GG + D + + Q L +L L LH+QG+I
Sbjct: 138 NSYLVGDE---LWVVMEFLEGGA--LTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 192
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
H+DIK ++LLT DG +K+SDFG + + G+P + APE+ + LP G
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPELISRLP--YG 248
Query: 224 YKVDIWSSGV 233
+VDIWS G+
Sbjct: 249 PEVDIWSLGI 258
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 27/210 (12%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNG------EINVDREIRL 91
+Y + + +G G+YG V T + A+K +IPN RE+++
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIK--------KIPNAFDVVTNAKRTLRELKI 107
Query: 92 LKMLQHRNVIGLVDVFVND----KKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAH-GY 146
LK +H N+I + D+ + + +Y++++ L ++ S+ P+ H Y
Sbjct: 108 LKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ----PLTLEHVRY 163
Query: 147 FL-QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL--DMFLHDDTITTS 203
FL QLL GL+Y+HS +IH+D+KP NLL+ + LKI DFG+A L H +T
Sbjct: 164 FLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY 223
Query: 204 QGSPVFQAPEIANGLPEISGYKVDIWSSGV 233
+ ++APE+ L E + +D+WS G
Sbjct: 224 VATRWYRAPELMLSLHEYT-QAIDLWSVGC 252
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 18/192 (9%)
Query: 45 LGEGSYGKV--KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIG 102
+GEGS G V + S L AVK +K QR E+ + E+ +++ QH NV+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLV--AVKKMDLRKQQR---RELLFN-EVVIMRDYQHENVVE 212
Query: 103 LVDVF-VNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
+ + + V D+ ++++ME+ GG + D + + Q L +L L LH+QG
Sbjct: 213 MYNSYLVGDE---LWVVMEFLEGGA--LTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 267
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
+IH+DIK ++LLT DG +K+SDFG + + G+P + APE+ + LP
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPELISRLP-- 323
Query: 222 SGYKVDIWSSGV 233
G +VDIWS G+
Sbjct: 324 YGPEVDIWSLGI 335
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 120/231 (51%), Gaps = 33/231 (14%)
Query: 20 DSDQVI----YDNKTIKVKMIGKYVMGDLLGEGSYGKV--KEMLDSETLCRRAVKIFKKK 73
D ++VI D KT + + I Y ++G GS+G V ++++S+ + + K+ + K
Sbjct: 20 DPNKVIKVLASDGKTGEQREIA-YTNCKVIGNGSFGVVFQAKLVESDEVAIK--KVLQDK 76
Query: 74 KLQRIPNGEINVDREIRLLKMLQHRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDM 129
+ + +RE++++++++H NV+ L F + DKK +++L ++EY +
Sbjct: 77 RFK---------NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRA 127
Query: 130 LDSTPYKKF----PIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLL-TLDGTLKISD 184
S Y K P+ Y QLL L Y+HS GI H+DIKP NLLL G LK+ D
Sbjct: 128 --SRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLID 185
Query: 185 FGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
FG A+ + + + + S ++APE+ G + +DIWS+G +
Sbjct: 186 FGSAK---ILIAGEPNVSXICSRYYRAPELIFGATNYTT-NIDIWSTGCVM 232
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 22/204 (10%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y + +G G++G + M D ++A ++ K ++R + NV REI + L+H
Sbjct: 20 RYELVKDIGAGNFGVARLMRD-----KQANELVAVKYIERGEKIDENVKREIINHRSLRH 74
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
N++ +V + + ++MEY GG + + ++ +F +A +F QL+ G+
Sbjct: 75 PNIVRFKEVILT--PTHLAIVMEYASGGELFERICNAG---RFSEDEARFFFQQLISGVS 129
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT----LKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
Y H+ + H+D+K N L LDG+ LKI+DFG +++ LH ++ G+P + A
Sbjct: 130 YAHAMQVAHRDLKLENTL--LDGSPAPRLKIADFGYSKA--SVLHSQP-KSAVGTPAYIA 184
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE+ E G D+WS GVTL
Sbjct: 185 PEVLLK-KEYDGKVADVWSCGVTL 207
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 35 MIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKM 94
M +Y + + LG+G++ V+ + T A KI KKL ++RE R+ ++
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLS--ARDHQKLEREARICRL 59
Query: 95 LQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQLLD 152
L+H N++ L D + YL+ + GG +D++ Y + A Q+L+
Sbjct: 60 LKHPNIVRLHDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEA---DASHCIQQILE 114
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLD---GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
+ + H GI+H+D+KP NLLL +K++DFG+A +++ G+P +
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGY 172
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+PE+ P G VD+W+ GV L
Sbjct: 173 LSPEVLRKDP--YGKPVDMWACGVIL 196
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 21/156 (13%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLD-STPYKKFPIWQAHG 145
E+R L + H N++ L +N + L+MEY GG L ++L + P + A
Sbjct: 52 ELRQLSRVNHPNIVKLYGACLN----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 107
Query: 146 YFLQLLDGLEYLHS---QGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHDDTIT 201
+ LQ G+ YLHS + +IH+D+KP NLLL GT LKI DFG A D+ H +T
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQTH---MT 162
Query: 202 TSQGSPVFQAPEIANGLPEISGY--KVDIWSSGVTL 235
++GS + APE+ G S Y K D++S G+ L
Sbjct: 163 NNKGSAAWMAPEVFEG----SNYSEKCDVFSWGIIL 194
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 21/156 (13%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLD-STPYKKFPIWQAHG 145
E+R L + H N++ L +N + L+MEY GG L ++L + P + A
Sbjct: 51 ELRQLSRVNHPNIVKLYGACLN----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 106
Query: 146 YFLQLLDGLEYLHS---QGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHDDTIT 201
+ LQ G+ YLHS + +IH+D+KP NLLL GT LKI DFG A D+ H +T
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQTH---MT 161
Query: 202 TSQGSPVFQAPEIANGLPEISGY--KVDIWSSGVTL 235
++GS + APE+ G S Y K D++S G+ L
Sbjct: 162 NNKGSAAWMAPEVFEG----SNYSEKCDVFSWGIIL 193
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 16/206 (7%)
Query: 35 MIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKM 94
M +Y + + LG+G++ V+ + T A KI KKL ++RE R+ ++
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLS--ARDHQKLEREARICRL 59
Query: 95 LQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQLLD 152
L+H N++ L D + YL+ + GG +D++ Y + A Q+L+
Sbjct: 60 LKHPNIVRLHDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEA---DASHCIQQILE 114
Query: 153 GLEYLHSQGIIHKDIKPGNLLL---TLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
+ + H GI+H+D+KP NLLL + +K++DFG+A +++ G+P +
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGY 172
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+PE+ P G VD+W+ GV L
Sbjct: 173 LSPEVLRKDP--YGKPVDMWACGVIL 196
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 102/191 (53%), Gaps = 14/191 (7%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G V + + A+K+ K +L++ E + REI + L+H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK-EGVEHQLRREIEIQSHLRHPNILRMY 80
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIH 164
+ F +D+K ++YL++E+ G + + + +F ++ + +L D L Y H + +IH
Sbjct: 81 NYF-HDRK-RIYLMLEFAPRG-ELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 165 KDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPEIANGLPEIS 222
+DIKP NLL+ G LKI+DFG + +H ++ G+ + PE+ G +
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWS------VHAPSLRRRXMCGTLDYLPPEMIEG--KTH 189
Query: 223 GYKVDIWSSGV 233
KVD+W +GV
Sbjct: 190 DEKVDLWCAGV 200
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 109/194 (56%), Gaps = 14/194 (7%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIGL 103
+G+GS+GKV + ++T A+K K+K + E+ NV +E+++++ L+H ++ L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC--VERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 104 VDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
F ++ + M+++++ +GG L+ L + F + +L+ L+YL +Q I
Sbjct: 81 WYSFQDE--EDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKLFICELVMALDYLQNQRI 136
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
IH+D+KP N+LL G + I+DF +A M + ITT G+ + APE+ + + +
Sbjct: 137 IHRDMKPDNILLDEHGHVHITDFNIAA---MLPRETQITTMAGTKPYMAPEMFSSR-KGA 192
Query: 223 GYK--VDIWSSGVT 234
GY VD WS GVT
Sbjct: 193 GYSFAVDWWSLGVT 206
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 41/219 (18%)
Query: 44 LLGEGSYGKV---KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNV 100
+LG+G++G+V + LDS + + KK++ + E+ LL L H+ V
Sbjct: 13 VLGQGAFGQVVKARNALDS--------RYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 101 IGLVDVFVN-----------DKKQKMYLIMEYCVG-GLQDMLDSTPY--KKFPIWQAHGY 146
+ ++ KK +++ MEYC L D++ S ++ W+
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL--- 121
Query: 147 FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAE----SLDMFLHD----- 197
F Q+L+ L Y+HSQGIIH+D+KP N+ + +KI DFG+A+ SLD+ D
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 198 ---DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGV 233
D +T++ G+ ++ A E+ +G + K+D++S G+
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNE-KIDMYSLGI 219
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 23 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 72
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 73 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 132
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 133 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYY 189
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 190 RAPELIFGATDYTS-SIDVWSAGCVL 214
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 34 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 83
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 84 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 143
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 144 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYY 200
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 201 RAPELIFGATDYTS-SIDVWSAGCVL 225
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 41 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 90
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 91 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 150
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 151 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYY 207
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 208 RAPELIFGATDYTS-SIDVWSAGCVL 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 34 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 83
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 84 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 143
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 144 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYY 200
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 201 RAPELIFGATDYTS-SIDVWSAGCVL 225
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 22 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 71
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYY 188
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 189 RAPELIFGATDYTS-SIDVWSAGCVL 213
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 30 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 79
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 80 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 139
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 140 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYY 196
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 197 RAPELIFGATDYTS-SIDVWSAGCVL 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 22 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 71
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYY 188
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 189 RAPELIFGATDYTS-SIDVWSAGCVL 213
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 26 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 75
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 76 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 135
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 136 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYY 192
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 193 RAPELIFGATDYTS-SIDVWSAGCVL 217
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 113/224 (50%), Gaps = 32/224 (14%)
Query: 35 MIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKM 94
++ KY + LG+G+YG V + +D RR ++ KK+ + R R + +
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSID-----RRTGEVVAVKKIFDAFQNSTDAQRTFREIMI 61
Query: 95 LQ----HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQL 150
L H N++ L++V D + +YL+ +Y L ++ + + P+ + + + QL
Sbjct: 62 LTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILE--PVHKQYVVY-QL 118
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAES----------LDMFLHDDTI 200
+ ++YLHS G++H+D+KP N+LL + +K++DFG++ S + + ++++T
Sbjct: 119 IKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTE 178
Query: 201 TTSQGSPV---------FQAPEIANGLPEISGYKVDIWSSGVTL 235
P+ ++APEI G + + +D+WS G L
Sbjct: 179 NFDDDQPILTDYVATRWYRAPEILLGSTKYTK-GIDMWSLGCIL 221
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 56 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 105
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 165
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 166 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYY 222
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 223 RAPELIFGATDYTS-SIDVWSAGCVL 247
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 17/195 (8%)
Query: 43 DLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIG 102
++LG G +G+V + ++ T + A KI K + ++ + V EI ++ L H N+I
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK----DKEEVKNEISVMNQLDHANLIQ 150
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHG--YFLQLLDGLEYLHSQ 160
L D F + K + L+MEY GG ++ D + + + + + Q+ +G+ ++H
Sbjct: 151 LYDAF--ESKNDIVLVMEYVDGG--ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM 206
Query: 161 GIIHKDIKPGNLL-LTLDG-TLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGL 218
I+H D+KP N+L + D +KI DFG+A + + + + G+P F APE+ N
Sbjct: 207 YILHLDLKPENILCVNRDAKQIKIIDFGLARR---YKPREKLKVNFGTPEFLAPEVVNY- 262
Query: 219 PEISGYKVDIWSSGV 233
+ + D+WS GV
Sbjct: 263 -DFVSFPTDMWSVGV 276
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 22 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 71
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYY 188
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 189 RAPELIFGATDYTS-SIDVWSAGCVL 213
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 27 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 76
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 77 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 136
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 137 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYY 193
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 194 RAPELIFGATDYTS-SIDVWSAGCVL 218
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 35 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 84
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 85 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 144
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 145 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYY 201
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 202 RAPELIFGATDYTS-SIDVWSAGCVL 226
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 93/194 (47%), Gaps = 20/194 (10%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVK-IFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
LGEGSYG V + + ET A+K + + LQ I +EI +++ +V+
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI-------IKEISIMQQCDSPHVVKY 89
Query: 104 VDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
+ K ++++MEYC G + K + L GLEYLH I
Sbjct: 90 YGSYF--KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKI 147
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESL-DMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
H+DIK GN+LL +G K++DFGVA L D + + G+P + APE+ +
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI---GTPFWMAPEVIQEI---- 200
Query: 223 GYK--VDIWSSGVT 234
GY DIWS G+T
Sbjct: 201 GYNCVADIWSLGIT 214
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 50 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 99
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 100 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 159
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 160 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYY 216
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 217 RAPELIFGATDYTS-SIDVWSAGCVL 241
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 9/193 (4%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKK-LQRIPNGEINVDREIRLLKMLQHRNVIG 102
++G+GS+GKV AVK+ +KK L++ I +R + LLK ++H ++G
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV-LLKNVKHPFLVG 103
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
L F K+Y +++Y GG + + F +A Y ++ L YLHS I
Sbjct: 104 LH--FSFQTADKLYFVLDYINGG-ELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNI 160
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
+++D+KP N+LL G + ++DFG+ + + H+ T +T G+P + APE+ + P
Sbjct: 161 VYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAPEVLHKQP--Y 216
Query: 223 GYKVDIWSSGVTL 235
VD W G L
Sbjct: 217 DRTVDWWCLGAVL 229
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 128
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 129 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 177
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + T G+P + APEI
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGATWTLCGTPEYLAPEII- 231
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 232 -LSKGYNKAVDWWALGVLI 249
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 56 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 105
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 165
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 166 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYY 222
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 223 RAPELIFGATDYTS-SIDVWSAGCVL 247
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 10/193 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIG 102
LLG+G++GKV + + T A+KI +K+ + I E+ + E R+L+ +H +
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVI--IAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
L F ++ +MEY GG + + + F +A Y +++ LEYLHS+ +
Sbjct: 70 LKYAF--QTHDRLCFVMEYANGG-ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
+++DIK NL+L DG +KI+DFG+ + + T+ T G+P + APE+
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLED--NDY 182
Query: 223 GYKVDIWSSGVTL 235
G VD W GV +
Sbjct: 183 GRAVDWWGLGVVM 195
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 21 SDQVIYDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPN 80
++ + + + Y + + LG+G++ V+ + A KI KKL
Sbjct: 15 TENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLS--AR 72
Query: 81 GEINVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKF 138
++RE R+ ++L+H N++ L D + YL+ + GG +D++ Y +
Sbjct: 73 DHQKLEREARICRLLKHPNIVRLHDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEA 130
Query: 139 PIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD---GTLKISDFGVAESLDMFL 195
A Q+L+ + ++H I+H+D+KP NLLL +K++DFG+A +++
Sbjct: 131 ---DASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQG 185
Query: 196 HDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + +PE+ P G VDIW+ GV L
Sbjct: 186 EQQAWFGFAGTPGYLSPEVLRKDP--YGKPVDIWACGVIL 223
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 35 MIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKM 94
M +Y + + +G+G++ V+ + T A KI KKL ++RE R+ ++
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLS--ARDHQKLEREARICRL 59
Query: 95 LQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQLLD 152
L+H N++ L D + YL+ + GG +D++ Y + A Q+L+
Sbjct: 60 LKHSNIVRLHDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEA---DASHCIQQILE 114
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLD---GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
+ + H G++H+D+KP NLLL +K++DFG+A +++ G+P +
Sbjct: 115 AVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGY 172
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+PE+ E G VDIW+ GV L
Sbjct: 173 LSPEVLR--KEAYGKPVDIWACGVIL 196
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 31 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 90
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + ++ L F ++ +Y++MEY GG +M S P+ +
Sbjct: 91 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFSEPHAR 145
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NLL+ G ++++DFG A+ +
Sbjct: 146 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----K 193
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
T G+P + APEI L + VD W+ GV +
Sbjct: 194 GRTWTLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 229
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 16 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 75
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + ++ L F ++ +Y++MEY GG +M S P+ +
Sbjct: 76 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFSEPHAR 130
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NLL+ G ++++DFG A+ +
Sbjct: 131 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----K 178
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
T G+P + APEI L + VD W+ GV +
Sbjct: 179 GRTWTLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 214
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 58 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 107
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 108 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 167
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 168 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYY 224
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 225 RAPELIFGATDYTS-SIDVWSAGCVL 249
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 103/197 (52%), Gaps = 14/197 (7%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKK-KKLQRIPNGEINVDREIRLLKMLQHRNVIG 102
++G G++G+V+ + + A+K+ K + ++R + +R+I + V+
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDI--MAFANSPWVVQ 139
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
L F +DK +Y++MEY GG D+++ P A Y +++ L+ +HS G+
Sbjct: 140 LFCAFQDDKY--LYMVMEYMPGG--DLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGL 195
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDM--FLHDDTITTSQGSPVFQAPEI--ANGL 218
IH+D+KP N+LL G LK++DFG +D +H DT G+P + +PE+ + G
Sbjct: 196 IHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV---GTPDYISPEVLKSQGG 252
Query: 219 PEISGYKVDIWSSGVTL 235
G + D WS GV L
Sbjct: 253 DGYYGRECDWWSVGVFL 269
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 10/193 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIG 102
LLG+G++GKV + + T A+KI +K+ + I E+ + E R+L+ +H +
Sbjct: 15 LLGKGTFGKVILVREKATGRYYAMKILRKEVI--IAKDEVAHTVTESRVLQNTRHPFLTA 72
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
L F ++ +MEY GG + + + F +A Y +++ LEYLHS+ +
Sbjct: 73 LKYAF--QTHDRLCFVMEYANGG-ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 129
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
+++DIK NL+L DG +KI+DFG+ + + T+ T G+P + APE+
Sbjct: 130 VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLED--NDY 185
Query: 223 GYKVDIWSSGVTL 235
G VD W GV +
Sbjct: 186 GRAVDWWGLGVVM 198
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 10/193 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIG 102
LLG+G++GKV + + T A+KI +K+ + I E+ + E R+L+ +H +
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVI--IAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
L F ++ +MEY GG + + + F +A Y +++ LEYLHS+ +
Sbjct: 70 LKYAF--QTHDRLCFVMEYANGG-ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
+++DIK NL+L DG +KI+DFG+ + + T+ T G+P + APE+
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLED--NDY 182
Query: 223 GYKVDIWSSGVTL 235
G VD W GV +
Sbjct: 183 GRAVDWWGLGVVM 195
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 60 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 109
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 110 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 169
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 170 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYY 226
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 227 RAPELIFGATDYTS-SIDVWSAGCVL 251
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 101 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 150
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK ++YL +++Y + + S + P+ Y QL
Sbjct: 151 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 210
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 211 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYY 267
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 268 RAPELIFGATDYTS-SIDVWSAGCVL 292
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 31/206 (15%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIGL 103
LG+G++G V EM + L ++ KKLQ + + +REI +LK LQH N++
Sbjct: 21 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHG----------YFLQLLD 152
V + ++ + LIMEY G L+D L QAH Y Q+
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-----------QAHAERIDHIKLLQYTSQICK 128
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF-QA 211
G+EYL ++ IH+D+ N+L+ + +KI DFG+ + L + SP+F A
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 212 PEIANGLPEISGYKV--DIWSSGVTL 235
PE L E S + V D+WS GV L
Sbjct: 189 PE---SLTE-SKFSVASDVWSFGVVL 210
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ--RIPNGEINVDREIRLLKMLQ 96
Y ++G GS+G V + LC + KK LQ R N RE+++++ L
Sbjct: 22 YTDTKVIGNGSFGVVYQA----KLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 71
Query: 97 HRNVIGLVDVFVN--DKKQKMYL--IMEYCVGGLQDMLD--STPYKKFPIWQAHGYFLQL 150
H N++ L F + +KK +YL +++Y + + S + P+ Y QL
Sbjct: 72 HCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L Y+HS GI H+DIKP NLLL D LK+ DFG A+ L + + + S +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYY 188
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
+APE+ G + + +D+WS+G L
Sbjct: 189 RAPELIFGATDYTS-SIDVWSAGCVL 213
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 22/204 (10%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y + +G G++G + M D +++ ++ K ++R + NV REI + L+H
Sbjct: 20 RYELVKDIGSGNFGVARLMRD-----KQSNELVAVKYIERGEKIDENVKREIINHRSLRH 74
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
N++ +V + + ++MEY GG + + ++ +F +A +F QL+ G+
Sbjct: 75 PNIVRFKEVILT--PTHLAIVMEYASGGELFERICNAG---RFSEDEARFFFQQLISGVS 129
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT----LKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
Y H+ + H+D+K N L LDG+ LKI FG ++S LH +T G+P + A
Sbjct: 130 YCHAMQVCHRDLKLENTL--LDGSPAPRLKICAFGYSKS--SVLHSQPKSTV-GTPAYIA 184
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE+ E G D+WS GVTL
Sbjct: 185 PEVLLK-KEYDGKVADVWSCGVTL 207
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPN-GEINVDREIRLLKMLQH 97
Y + +++G+G + V+ ++ ET + AVKI K P ++ RE + ML+H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGG---LQDMLDSTPYKKFPIWQAHGYFLQLLDGL 154
+++ L++ + +D +Y++ E+ G + + + + A Y Q+L+ L
Sbjct: 88 PHIVELLETYSSDGM--LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 155 EYLHSQGIIHKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQ-GSPVFQ 210
Y H IIH+D+KP +LL +K+ FGVA L + + G+P F
Sbjct: 146 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG---ESGLVAGGRVGTPHFM 202
Query: 211 APEIANGLPEISGYKVDIWSSGVTL 235
APE+ P G VD+W GV L
Sbjct: 203 APEVVKREP--YGKPVDVWGCGVIL 225
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPN-GEINVDREIRLLKMLQH 97
Y + +++G+G + V+ ++ ET + AVKI K P ++ RE + ML+H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGG---LQDMLDSTPYKKFPIWQAHGYFLQLLDGL 154
+++ L++ + +D +Y++ E+ G + + + + A Y Q+L+ L
Sbjct: 86 PHIVELLETYSSDGM--LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 155 EYLHSQGIIHKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQ-GSPVFQ 210
Y H IIH+D+KP +LL +K+ FGVA L + + G+P F
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG---ESGLVAGGRVGTPHFM 200
Query: 211 APEIANGLPEISGYKVDIWSSGVTL 235
APE+ P G VD+W GV L
Sbjct: 201 APEVVKREP--YGKPVDVWGCGVIL 223
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
+LG+GS+GKV ET AVK+ KK + + + E + E R+L + RN L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTM-TEKRILSLA--RNHPFL 86
Query: 104 VDVFVN-DKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
+F +++ +ME+ GG M ++F +A Y +++ L +LH +GI
Sbjct: 87 TQLFCCFQTPDRLFFVMEFVNGG-DLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGI 145
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
I++D+K N+LL +G K++DFG+ + + + T T G+P + APEI + +
Sbjct: 146 IYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPEILQEM--LY 201
Query: 223 GYKVDIWSSGVTL 235
G VD W+ GV L
Sbjct: 202 GPAVDWWAMGVLL 214
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
LG+G + K E+ D++T A KI K L + P+ + EI + + L H++V+G
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-PHQREKMSMEISIHRSLAHQHVVGF 82
Query: 104 VDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDGLEYLHSQGI 162
F ++ +++++E C + +L+ +K +A Y Q++ G +YLH +
Sbjct: 83 HGFFEDN--DFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 138
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
IH+D+K GNL L D +KI DFG+A ++ + T G+P + APE+ + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEY--DGERKKTLCGTPNYIAPEVLSK--KGH 194
Query: 223 GYKVDIWSSGVTL 235
++VD+WS G +
Sbjct: 195 SFEVDVWSIGCIM 207
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
LG+G + K E+ D++T A KI K L + P+ + EI + + L H++V+G
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-PHQREKMSMEISIHRSLAHQHVVGF 82
Query: 104 VDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDGLEYLHSQGI 162
F ++ +++++E C + +L+ +K +A Y Q++ G +YLH +
Sbjct: 83 HGFFEDN--DFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 138
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
IH+D+K GNL L D +KI DFG+A ++ + T G+P + APE+ + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEY--DGERKKTLCGTPNYIAPEVLSK--KGH 194
Query: 223 GYKVDIWSSGVTL 235
++VD+WS G +
Sbjct: 195 SFEVDVWSIGCIM 207
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 105/201 (52%), Gaps = 22/201 (10%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPN-GEINVDREIRLLKMLQH 97
++ ++LG G++ +V L + R K+F K +++ P + +++ EI +LK ++H
Sbjct: 11 FIFMEVLGSGAFSEV--FLVKQ---RLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
N++ L D++ + YL+M+ GG +L+ Y + A Q+L ++
Sbjct: 66 ENIVTLEDIY--ESTTHYYLVMQLVSGGELFDRILERGVYTEK---DASLVIQQVLSAVK 120
Query: 156 YLHSQGIIHKDIKPGNLL-LTLDGTLK--ISDFGVAESLDMFLHDDTITTSQGSPVFQAP 212
YLH GI+H+D+KP NLL LT + K I+DFG L + ++T+ G+P + AP
Sbjct: 121 YLHENGIVHRDLKPENLLYLTPEENSKIMITDFG----LSKMEQNGIMSTACGTPGYVAP 176
Query: 213 EIANGLPEISGYKVDIWSSGV 233
E+ P VD WS GV
Sbjct: 177 EVLAQKPYSKA--VDCWSIGV 195
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ +G GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 30 WENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + ++ L F ++ +Y++MEY GG DM S P+ +
Sbjct: 90 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYMPGG--DMFSHLRRIGRFSEPHAR 144
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NLL+ G +K++DFG A+ +
Sbjct: 145 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----K 192
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 193 GRTWXLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 228
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ +G GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 30 WENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + ++ L F ++ +Y++MEY GG DM S P+ +
Sbjct: 90 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYMPGG--DMFSHLRRIGRFSEPHAR 144
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NLL+ G +K++DFG A+ +
Sbjct: 145 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----K 192
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 193 GRTWXLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 228
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 107/197 (54%), Gaps = 16/197 (8%)
Query: 44 LLGEGSYGKV---KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNV 100
+LG+GS+GKV +++ ++ A+K+ KK L+ ++R+I L + H V
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI--LADVNHPFV 92
Query: 101 IGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYK-KFPIWQAHGYFLQLLDGLEYLHS 159
+ L F + K+YLI+++ GG D+ + F Y +L GL++LHS
Sbjct: 93 VKLHYAFQTE--GKLYLILDFLRGG--DLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS 148
Query: 160 QGIIHKDIKPGNLLLTLDGTLKISDFGVA-ESLDMFLHDDTITTSQGSPVFQAPEIANGL 218
GII++D+KP N+LL +G +K++DFG++ E++D H+ + G+ + APE+ N
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAID---HEKKAYSFCGTVEYMAPEVVNR- 204
Query: 219 PEISGYKVDIWSSGVTL 235
+ + D WS GV +
Sbjct: 205 -QGHSHSADWWSYGVLM 220
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + ET A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 108
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 109 FSFKDN--SNLYMVMEYAPGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 157
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NL++ G +K++DFG A+ + G+P + APEI
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII- 211
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 212 -LSKGYNKAVDWWALGVLI 229
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
LG+G + K E+ D++T A KI K L + P+ + EI + + L H++V+G
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-PHQREKMSMEISIHRSLAHQHVVGF 86
Query: 104 VDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDGLEYLHSQGI 162
F ++ +++++E C + +L+ +K +A Y Q++ G +YLH +
Sbjct: 87 HGFFEDN--DFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 142
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
IH+D+K GNL L D +KI DFG+A ++ + T G+P + APE+ + +
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEY--DGERKKTLCGTPNYIAPEVLSK--KGH 198
Query: 223 GYKVDIWSSGVTL 235
++VD+WS G +
Sbjct: 199 SFEVDVWSIGCIM 211
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 23/200 (11%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH------ 97
++G GSY KV + +T A+++ KK+ +N D +I ++ +H
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKEL--------VNDDEDIDWVQTEKHVFEQAS 110
Query: 98 --RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
++GL F + +++ ++EY GG M +K P A Y ++ L
Sbjct: 111 NHPFLVGLHSCF--QTESRLFFVIEYVNGG-DLMFHMQRQRKLPEEHARFYSAEISLALN 167
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIA 215
YLH +GII++D+K N+LL +G +K++D+G+ + + DT +T G+P + APEI
Sbjct: 168 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEIL 225
Query: 216 NGLPEISGYKVDIWSSGVTL 235
G E G+ VD W+ GV +
Sbjct: 226 RG--EDYGFSVDWWALGVLM 243
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
Y + + LG+G++ V+ + A KI KKL ++RE R+ ++L+H
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLS--ARDHQKLEREARICRLLKHP 81
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQLLDGLEY 156
N++ L D + YLI + GG +D++ Y + A Q+L+ + +
Sbjct: 82 NIVRLHDSISEEGHH--YLIFDLVTGGELFEDIVAREYYSEA---DASHCIQQILEAVLH 136
Query: 157 LHSQGIIHKDIKPGNLLLT--LDG-TLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
H G++H+D+KP NLLL L G +K++DFG+A +++ G+P + +PE
Sbjct: 137 CHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPE 194
Query: 214 IANGLPEISGYKVDIWSSGVTL 235
+ P G VD+W+ GV L
Sbjct: 195 VLRKDP--YGKPVDLWACGVIL 214
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 30 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTL 89
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + ++ L F ++ +Y++MEY GG +M S P+ +
Sbjct: 90 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYAPGG--EMFSHLRRIGRFSEPHAR 144
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NL++ G +K++DFG+A+ +
Sbjct: 145 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV-----K 192
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 193 GRTWXLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 228
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 30 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + ++ L F ++ +Y++MEY GG +M S P+ +
Sbjct: 90 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFSEPHAR 144
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NLL+ G ++++DFG A+ +
Sbjct: 145 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----K 192
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 193 GRTWXLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 228
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 107
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 108 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 156
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + G+P + APEI
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLAGTPEYLAPEII- 210
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 211 -LSKGYNKAVDWWALGVLI 228
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 30 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + ++ L F ++ +Y++MEY GG +M S P+ +
Sbjct: 90 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYAPGG--EMFSHLRRIGRFSEPHAR 144
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NL++ G +K++DFG A+ +
Sbjct: 145 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----K 192
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 193 GRTWXLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 228
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIGL 103
LG+G++G V EM + L ++ KKLQ + + +REI +LK LQH N++
Sbjct: 24 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
V + ++ + LIMEY G L+D L ++ + Y Q+ G+EYL ++
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRY 141
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF-QAPEIANGLPEI 221
IH+D+ N+L+ + +KI DFG+ + L + SP+F APE L E
Sbjct: 142 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE---SLTE- 197
Query: 222 SGYKV--DIWSSGVTL 235
S + V D+WS GV L
Sbjct: 198 SKFSVASDVWSFGVVL 213
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIGL 103
LG+G++G V EM + L ++ KKLQ + + +REI +LK LQH N++
Sbjct: 17 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
V + ++ + LIMEY G L+D L ++ + Y Q+ G+EYL ++
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRY 134
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF-QAPEIANGLPEI 221
IH+D+ N+L+ + +KI DFG+ + L + SP+F APE L E
Sbjct: 135 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE---SLTE- 190
Query: 222 SGYKV--DIWSSGVTL 235
S + V D+WS GV L
Sbjct: 191 SKFSVASDVWSFGVVL 206
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 107
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 108 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 156
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + G+P + APEI
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLXGTPEYLAPEII- 210
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 211 -LSKGYNKAVDWWALGVLI 228
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 104/197 (52%), Gaps = 16/197 (8%)
Query: 44 LLGEGSYGKV---KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNV 100
+LG+GS+GKV K++ S+ A+K+ KK L+ ++R+I L + H +
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI--LVEVNHPFI 88
Query: 101 IGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYK-KFPIWQAHGYFLQLLDGLEYLHS 159
+ L F + K+YLI+++ GG D+ + F Y +L L++LHS
Sbjct: 89 VKLHYAFQTE--GKLYLILDFLRGG--DLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 160 QGIIHKDIKPGNLLLTLDGTLKISDFGVA-ESLDMFLHDDTITTSQGSPVFQAPEIANGL 218
GII++D+KP N+LL +G +K++DFG++ ES+D H+ + G+ + APE+ N
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID---HEKKAYSFCGTVEYMAPEVVNRR 201
Query: 219 PEISGYKVDIWSSGVTL 235
D WS GV +
Sbjct: 202 GHTQS--ADWWSFGVLM 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIGL 103
LG+G++G V EM + L ++ KKLQ + + +REI +LK LQH N++
Sbjct: 18 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
V + ++ + LIMEY G L+D L ++ + Y Q+ G+EYL ++
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF-QAPEIANGLPEI 221
IH+D+ N+L+ + +KI DFG+ + L + SP+F APE L E
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE---SLTE- 191
Query: 222 SGYKV--DIWSSGVTL 235
S + V D+WS GV L
Sbjct: 192 SKFSVASDVWSFGVVL 207
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIGL 103
LG+G++G V EM + L ++ KKLQ + + +REI +LK LQH N++
Sbjct: 23 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
V + ++ + LIMEY G L+D L ++ + Y Q+ G+EYL ++
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRY 140
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF-QAPEIANGLPEI 221
IH+D+ N+L+ + +KI DFG+ + L + SP+F APE L E
Sbjct: 141 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE---SLTE- 196
Query: 222 SGYKV--DIWSSGVTL 235
S + V D+WS GV L
Sbjct: 197 SKFSVASDVWSFGVVL 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIGL 103
LG+G++G V EM + L ++ KKLQ + + +REI +LK LQH N++
Sbjct: 22 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
V + ++ + LIMEY G L+D L ++ + Y Q+ G+EYL ++
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRY 139
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF-QAPEIANGLPEI 221
IH+D+ N+L+ + +KI DFG+ + L + SP+F APE L E
Sbjct: 140 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE---SLTE- 195
Query: 222 SGYKV--DIWSSGVTL 235
S + V D+WS GV L
Sbjct: 196 SKFSVASDVWSFGVVL 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIGL 103
LG+G++G V EM + L ++ KKLQ + + +REI +LK LQH N++
Sbjct: 18 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
V + ++ + LIMEY G L+D L + I + Y Q+ G+EYL ++
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-KLLQYTSQICKGMEYLGTKRY 135
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF-QAPEIANGLPEI 221
IH+D+ N+L+ + +KI DFG+ + L + SP+F APE L E
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE---SLTE- 191
Query: 222 SGYKV--DIWSSGVTL 235
S + V D+WS GV L
Sbjct: 192 SKFSVASDVWSFGVVL 207
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIGL 103
LG+G++G V EM + L ++ KKLQ + + +REI +LK LQH N++
Sbjct: 49 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
V + ++ + LIMEY G L+D L ++ + Y Q+ G+EYL ++
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRY 166
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF-QAPEIANGLPEI 221
IH+D+ N+L+ + +KI DFG+ + L + SP+F APE L E
Sbjct: 167 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE---SLTE- 222
Query: 222 SGYKV--DIWSSGVTL 235
S + V D+WS GV L
Sbjct: 223 SKFSVASDVWSFGVVL 238
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 104/197 (52%), Gaps = 16/197 (8%)
Query: 44 LLGEGSYGKV---KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNV 100
+LG+GS+GKV K++ S+ A+K+ KK L+ ++R+I L + H +
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI--LVEVNHPFI 89
Query: 101 IGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYK-KFPIWQAHGYFLQLLDGLEYLHS 159
+ L F + K+YLI+++ GG D+ + F Y +L L++LHS
Sbjct: 90 VKLHYAFQTE--GKLYLILDFLRGG--DLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 145
Query: 160 QGIIHKDIKPGNLLLTLDGTLKISDFGVA-ESLDMFLHDDTITTSQGSPVFQAPEIANGL 218
GII++D+KP N+LL +G +K++DFG++ ES+D H+ + G+ + APE+ N
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID---HEKKAYSFCGTVEYMAPEVVNRR 202
Query: 219 PEISGYKVDIWSSGVTL 235
D WS GV +
Sbjct: 203 GHTQS--ADWWSFGVLM 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIGL 103
LG+G++G V EM + L ++ KKLQ + + +REI +LK LQH N++
Sbjct: 21 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
V + ++ + LIMEY G L+D L ++ + Y Q+ G+EYL ++
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF-QAPEIANGLPEI 221
IH+D+ N+L+ + +KI DFG+ + L + SP+F APE L E
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE---SLTE- 194
Query: 222 SGYKV--DIWSSGVTL 235
S + V D+WS GV L
Sbjct: 195 SKFSVASDVWSFGVVL 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIGL 103
LG+G++G V EM + L ++ KKLQ + + +REI +LK LQH N++
Sbjct: 36 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
V + ++ + LIMEY G L+D L ++ + Y Q+ G+EYL ++
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF-QAPEIANGLPEI 221
IH+D+ N+L+ + +KI DFG+ + L + SP+F APE L E
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE---SLTE- 209
Query: 222 SGYKV--DIWSSGVTL 235
S + V D+WS GV L
Sbjct: 210 SKFSVASDVWSFGVVL 225
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIGL 103
LG+G++G V EM + L ++ KKLQ + + +REI +LK LQH N++
Sbjct: 16 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
V + ++ + LIMEY G L+D L ++ + Y Q+ G+EYL ++
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRY 133
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF-QAPEIANGLPEI 221
IH+D+ N+L+ + +KI DFG+ + L + SP+F APE L E
Sbjct: 134 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE---SLTE- 189
Query: 222 SGYKV--DIWSSGVTL 235
S + V D+WS GV L
Sbjct: 190 SKFSVASDVWSFGVVL 205
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIGL 103
LG+G++G V EM + L ++ KKLQ + + +REI +LK LQH N++
Sbjct: 25 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
V + ++ + LIMEY G L+D L ++ + Y Q+ G+EYL ++
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRY 142
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF-QAPEIANGLPEI 221
IH+D+ N+L+ + +KI DFG+ + L + SP+F APE L E
Sbjct: 143 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE---SLTE- 198
Query: 222 SGYKV--DIWSSGVTL 235
S + V D+WS GV L
Sbjct: 199 SKFSVASDVWSFGVVL 214
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 22/204 (10%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+Y + +G G++G + M D +++ ++ K ++R + NV REI + L+H
Sbjct: 20 RYELVKDIGSGNFGVARLMRD-----KQSNELVAVKYIERGEKIDENVKREIINHRSLRH 74
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
N++ +V + + ++MEY GG + + ++ +F +A +F QL+ G+
Sbjct: 75 PNIVRFKEVILT--PTHLAIVMEYASGGELFERICNAG---RFSEDEARFFFQQLISGVS 129
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGT----LKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
Y H+ + H+D+K N L LDG+ LKI FG ++S LH T G+P + A
Sbjct: 130 YCHAMQVCHRDLKLENTL--LDGSPAPRLKICAFGYSKS--SVLHSQPKDTV-GTPAYIA 184
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE+ E G D+WS GVTL
Sbjct: 185 PEVLLK-KEYDGKVADVWSCGVTL 207
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 104/197 (52%), Gaps = 16/197 (8%)
Query: 44 LLGEGSYGKV---KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNV 100
+LG+GS+GKV K++ S+ A+K+ KK L+ ++R+I L + H +
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI--LVEVNHPFI 88
Query: 101 IGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYK-KFPIWQAHGYFLQLLDGLEYLHS 159
+ L F + K+YLI+++ GG D+ + F Y +L L++LHS
Sbjct: 89 VKLHYAFQTE--GKLYLILDFLRGG--DLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 160 QGIIHKDIKPGNLLLTLDGTLKISDFGVA-ESLDMFLHDDTITTSQGSPVFQAPEIANGL 218
GII++D+KP N+LL +G +K++DFG++ ES+D H+ + G+ + APE+ N
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID---HEKKAYSFCGTVEYMAPEVVNRR 201
Query: 219 PEISGYKVDIWSSGVTL 235
D WS GV +
Sbjct: 202 GHTQS--ADWWSFGVLM 216
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 24/221 (10%)
Query: 29 KTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRI--PNGEINVD 86
K I + + + LLGEG+YG V T +I KK++ P +
Sbjct: 3 KRIVYNISSDFQLKSLLGEGAYGVVCSATHKPT-----GEIVAIKKIEPFDKPLFALRTL 57
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQ---KMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
REI++LK +H N+I + ++ D + ++Y+I E L ++ + I
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI--- 114
Query: 144 HGYFL-QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
YF+ Q L ++ LH +IH+D+KP NLL+ + LK+ DFG+A +D D++ T
Sbjct: 115 -QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 203 SQGSPV--------FQAPEIANGLPEISGYKVDIWSSGVTL 235
Q S + ++APE+ + S +D+WS G L
Sbjct: 174 GQQSGMTEYVATRWYRAPEVMLTSAKYSR-AMDVWSCGCIL 213
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIGL 103
LG+G++G V EM + L ++ KKLQ + + +REI +LK LQH N++
Sbjct: 36 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
V + ++ + LIMEY G L+D L + I + Y Q+ G+EYL ++
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-KLLQYTSQICKGMEYLGTKRY 153
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF-QAPEIANGLPEI 221
IH+D+ N+L+ + +KI DFG+ + L + SP+F APE L E
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE---SLTE- 209
Query: 222 SGYKV--DIWSSGVTL 235
S + V D+WS GV L
Sbjct: 210 SKFSVASDVWSFGVVL 225
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 17/215 (7%)
Query: 28 NKTIKVKMIGK-YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKK-KKLQRIPNGEINV 85
NK ++M + Y + ++G G++G+V+ + T A+K+ K + ++R +
Sbjct: 64 NKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE 123
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHG 145
+R+I + V+ L F +D+ +Y++MEY GG D+++ P A
Sbjct: 124 ERDI--MAFANSPWVVQLFYAFQDDRY--LYMVMEYMPGG--DLVNLMSNYDVPEKWARF 177
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLD---MFLHDDTITT 202
Y +++ L+ +HS G IH+D+KP N+LL G LK++DFG ++ M D T
Sbjct: 178 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD----T 233
Query: 203 SQGSPVFQAPEI--ANGLPEISGYKVDIWSSGVTL 235
+ G+P + +PE+ + G G + D WS GV L
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 268
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 24/221 (10%)
Query: 29 KTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRI--PNGEINVD 86
K I + + + LLGEG+YG V T +I KK++ P +
Sbjct: 3 KRIVYNISSDFQLKSLLGEGAYGVVCSATHKPT-----GEIVAIKKIEPFDKPLFALRTL 57
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQ---KMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
REI++LK +H N+I + ++ D + ++Y+I E L ++ + I
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI--- 114
Query: 144 HGYFL-QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
YF+ Q L ++ LH +IH+D+KP NLL+ + LK+ DFG+A +D D++ T
Sbjct: 115 -QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 203 SQGSPV--------FQAPEIANGLPEISGYKVDIWSSGVTL 235
Q S + ++APE+ + S +D+WS G L
Sbjct: 174 GQQSGMTEXVATRWYRAPEVMLTSAKYSR-AMDVWSCGCIL 213
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 24/221 (10%)
Query: 29 KTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRI--PNGEINVD 86
K I + + + LLGEG+YG V T +I KK++ P +
Sbjct: 3 KRIVYNISSDFQLKSLLGEGAYGVVCSATHKPT-----GEIVAIKKIEPFDKPLFALRTL 57
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQ---KMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
REI++LK +H N+I + ++ D + ++Y+I E L ++ + I
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI--- 114
Query: 144 HGYFL-QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
YF+ Q L ++ LH +IH+D+KP NLL+ + LK+ DFG+A +D D++ T
Sbjct: 115 -QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 203 SQGSPV--------FQAPEIANGLPEISGYKVDIWSSGVTL 235
Q S + ++APE+ + S +D+WS G L
Sbjct: 174 GQQSGMVEFVATRWYRAPEVMLTSAKYSR-AMDVWSCGCIL 213
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + ET A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 100
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 101 FSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 149
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + G+P + APEI
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII- 203
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 204 -LSKGYNKAVDWWALGVLI 221
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 30 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL 89
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + ++ L F ++ +Y++MEY GG +M S P+ +
Sbjct: 90 N-EKRILQAVNFPFLVKLEYSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFSEPHAR 144
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NLL+ G ++++DFG A+ +
Sbjct: 145 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----K 192
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 193 GRTWXLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 228
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 30 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL 89
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + ++ L F ++ +Y++MEY GG +M S P+ +
Sbjct: 90 N-EKRILQAVNFPFLVKLEYSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFSEPHAR 144
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NLL+ G ++++DFG A+ +
Sbjct: 145 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----K 192
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 193 GRTWXLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 228
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 17/215 (7%)
Query: 28 NKTIKVKMIGK-YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKK-KKLQRIPNGEINV 85
NK ++M + Y + ++G G++G+V+ + T A+K+ K + ++R +
Sbjct: 59 NKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE 118
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHG 145
+R+I + V+ L F +D+ +Y++MEY GG D+++ P A
Sbjct: 119 ERDI--MAFANSPWVVQLFYAFQDDRY--LYMVMEYMPGG--DLVNLMSNYDVPEKWARF 172
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLD---MFLHDDTITT 202
Y +++ L+ +HS G IH+D+KP N+LL G LK++DFG ++ M D T
Sbjct: 173 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD----T 228
Query: 203 SQGSPVFQAPEI--ANGLPEISGYKVDIWSSGVTL 235
+ G+P + +PE+ + G G + D WS GV L
Sbjct: 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 263
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + ET A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 108
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 109 FSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 157
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + G+P + APEI
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII- 211
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 212 -LSKGYNKAVDWWALGVLI 229
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 17/215 (7%)
Query: 28 NKTIKVKMIGK-YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKK-KKLQRIPNGEINV 85
NK ++M + Y + ++G G++G+V+ + T A+K+ K + ++R +
Sbjct: 64 NKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE 123
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHG 145
+R+I + V+ L F +D+ +Y++MEY GG D+++ P A
Sbjct: 124 ERDI--MAFANSPWVVQLFYAFQDDRY--LYMVMEYMPGG--DLVNLMSNYDVPEKWARF 177
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLD---MFLHDDTITT 202
Y +++ L+ +HS G IH+D+KP N+LL G LK++DFG ++ M D T
Sbjct: 178 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD----T 233
Query: 203 SQGSPVFQAPEI--ANGLPEISGYKVDIWSSGVTL 235
+ G+P + +PE+ + G G + D WS GV L
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 268
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + ET A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 128
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 129 FSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 177
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + G+P + APEI
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII- 231
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 232 -LSKGYNKAVDWWALGVLI 249
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + ET A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 108
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 109 FSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 157
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + G+P + APEI
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII- 211
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 212 -LSKGYNKAVDWWALGVLI 229
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 30 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL 89
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + ++ L F ++ +Y++MEY GG +M S P+ +
Sbjct: 90 N-EKRILQAVNFPFLVKLEYSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFSEPHAR 144
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NLL+ G ++++DFG A+ +
Sbjct: 145 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----K 192
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 193 GRTWXLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 228
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + ET A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 108
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 109 FSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 157
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + G+P + APEI
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII- 211
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 212 -LSKGYNKAVDWWALGVLI 229
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 42/231 (18%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR---EI 89
V + Y++ L+G GSYG V D T A+K K+ R+ I+ R EI
Sbjct: 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIK-----KVNRMFEDLIDCKRILREI 76
Query: 90 RLLKMLQHRNVIGLVDVFVND---KKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
+L L+ +I L D+ + D K ++Y+++E L+ + K PI+ +
Sbjct: 77 TILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLF------KTPIFLTEEH 130
Query: 147 ----FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL----DMFLHDD 198
LL G ++H GIIH+D+KP N LL D ++K+ DFG+A ++ D + +D
Sbjct: 131 IKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVND 190
Query: 199 TITTSQGSP----------------VFQAPEIANGLPEISGYKVDIWSSGV 233
+ P ++APE+ L E +DIWS+G
Sbjct: 191 LEENEEPGPHNKNLKKQLTSHVVTRWYRAPELI-LLQENYTKSIDIWSTGC 240
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ +G GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 30 WENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + ++ L F ++ +Y++MEY GG +M S P+ +
Sbjct: 90 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFSEPHAR 144
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NLL+ G +K++DFG A+ +
Sbjct: 145 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----K 192
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 193 GRTWXLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 228
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 101/193 (52%), Gaps = 10/193 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
LG+G + K E+ D++T A KI K L + P+ + EI + + L H++V+G
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-PHQREKMSMEISIHRSLAHQHVVGF 80
Query: 104 VDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDGLEYLHSQGI 162
F ++ +++++E C + +L+ +K +A Y Q++ G +YLH +
Sbjct: 81 HGFFEDN--DFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 136
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
IH+D+K GNL L D +KI DFG+A ++ + G+P + APE+ + +
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLSK--KGH 192
Query: 223 GYKVDIWSSGVTL 235
++VD+WS G +
Sbjct: 193 SFEVDVWSIGCIM 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 10/193 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIG 102
LLG+G++GKV + + T A+KI +K+ + I E+ + E R+L+ +H +
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVI--IAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
L F ++ +MEY GG + + + F +A Y +++ LEYLHS+ +
Sbjct: 70 LKYAF--QTHDRLCFVMEYANGG-ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
+++DIK NL+L DG +KI+DFG+ + + T+ G+P + APE+
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLED--NDY 182
Query: 223 GYKVDIWSSGVTL 235
G VD W GV +
Sbjct: 183 GRAVDWWGLGVVM 195
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 10/193 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIG 102
LLG+G++GKV + + T A+KI +K+ + I E+ + E R+L+ +H +
Sbjct: 17 LLGKGTFGKVILVREKATGRYYAMKILRKEVI--IAKDEVAHTVTESRVLQNTRHPFLTA 74
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
L F ++ +MEY GG + + + F +A Y +++ LEYLHS+ +
Sbjct: 75 LKYAF--QTHDRLCFVMEYANGG-ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 131
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
+++DIK NL+L DG +KI+DFG+ + + T+ G+P + APE+
Sbjct: 132 VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLED--NDY 187
Query: 223 GYKVDIWSSGVTL 235
G VD W GV +
Sbjct: 188 GRAVDWWGLGVVM 200
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 107
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 108 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 156
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + G+P + APEI
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII- 210
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 211 -LSKGYNKAVDWWALGVLI 228
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 30 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + ++ L F ++ +Y++MEY GG +M S P+ +
Sbjct: 90 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFSEPHAR 144
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NLL+ G ++++DFG A+ +
Sbjct: 145 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----K 192
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 193 GRTWXLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 228
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 10/193 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIG 102
LLG+G++GKV + + T A+KI +K+ + I E+ + E R+L+ +H +
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVI--IAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
L F ++ +MEY GG + + + F +A Y +++ LEYLHS+ +
Sbjct: 70 LKYAF--QTHDRLCFVMEYANGG-ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
+++DIK NL+L DG +KI+DFG+ + + T+ G+P + APE+
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLED--NDY 182
Query: 223 GYKVDIWSSGVTL 235
G VD W GV +
Sbjct: 183 GRAVDWWGLGVVM 195
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 10/193 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIG 102
LLG+G++GKV + + T A+KI +K+ + I E+ + E R+L+ +H +
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVI--IAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
L F ++ +MEY GG + + + F +A Y +++ LEYLHS+ +
Sbjct: 70 LKYAF--QTHDRLCFVMEYANGG-ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
+++DIK NL+L DG +KI+DFG+ + + T+ G+P + APE+
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLED--NDY 182
Query: 223 GYKVDIWSSGVTL 235
G VD W GV +
Sbjct: 183 GRAVDWWGLGVVM 195
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 108
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 109 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 157
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + G+P + APEI
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII- 211
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 212 -LSKGYNKAVDWWALGVLI 229
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 30 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + ++ L F ++ +Y++MEY GG +M S P+ +
Sbjct: 90 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFSEPHAR 144
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NLL+ G ++++DFG A+ +
Sbjct: 145 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----K 192
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 193 GRTWXLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 228
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 23/200 (11%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH------ 97
++G GSY KV + +T A+K+ KK+ +N D +I ++ +H
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKEL--------VNDDEDIDWVQTEKHVFEQAS 63
Query: 98 --RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
++GL F + +++ ++EY GG M +K P A Y ++ L
Sbjct: 64 NHPFLVGLHSCF--QTESRLFFVIEYVNGG-DLMFHMQRQRKLPEEHARFYSAEISLALN 120
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIA 215
YLH +GII++D+K N+LL +G +K++D+G+ + + DT + G+P + APEI
Sbjct: 121 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEIL 178
Query: 216 NGLPEISGYKVDIWSSGVTL 235
G E G+ VD W+ GV +
Sbjct: 179 RG--EDYGFSVDWWALGVLM 196
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 107
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 108 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 156
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + G+P + APEI
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII- 210
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 211 -LSKGYNKAVDWWALGVLI 228
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 107
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 108 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 156
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + G+P + APEI
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII- 210
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 211 -LSKGYNKAVDWWALGVLI 228
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 107
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 108 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 156
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + G+P + APEI
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII- 210
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 211 -LSKGYNKAVDWWALGVLI 228
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 23/200 (11%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH------ 97
++G GSY KV + +T A+K+ KK+ +N D +I ++ +H
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKEL--------VNDDEDIDWVQTEKHVFEQAS 67
Query: 98 --RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
++GL F + +++ ++EY GG M +K P A Y ++ L
Sbjct: 68 NHPFLVGLHSCF--QTESRLFFVIEYVNGG-DLMFHMQRQRKLPEEHARFYSAEISLALN 124
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIA 215
YLH +GII++D+K N+LL +G +K++D+G+ + + DT + G+P + APEI
Sbjct: 125 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEIL 182
Query: 216 NGLPEISGYKVDIWSSGVTL 235
G E G+ VD W+ GV +
Sbjct: 183 RG--EDYGFSVDWWALGVLM 200
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKK---KLQRIPNGEINVDREIRLLKML 95
+ G +LGEGS+ V + T A+KI +K+ K ++P V RE ++ L
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMSRL 90
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H + L F +D +K+Y + Y G ++L F Y +++ L
Sbjct: 91 DHPFFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSAL 146
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
EYLH +GIIH+D+KP N+LL D ++I+DFG A+ L + G+ + +PE+
Sbjct: 147 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
Query: 215 ANGLPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 207 ---LTEKSACKSSDLWALGCII 225
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 23/200 (11%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH------ 97
++G GSY KV + +T A+K+ KK+ +N D +I ++ +H
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKEL--------VNDDEDIDWVQTEKHVFEQAS 78
Query: 98 --RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
++GL F + +++ ++EY GG M +K P A Y ++ L
Sbjct: 79 NHPFLVGLHSCF--QTESRLFFVIEYVNGG-DLMFHMQRQRKLPEEHARFYSAEISLALN 135
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIA 215
YLH +GII++D+K N+LL +G +K++D+G+ + + DT + G+P + APEI
Sbjct: 136 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEIL 193
Query: 216 NGLPEISGYKVDIWSSGVTL 235
G E G+ VD W+ GV +
Sbjct: 194 RG--EDYGFSVDWWALGVLM 211
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 31 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 90
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + ++ L F ++ +Y++MEY GG +M S P+ +
Sbjct: 91 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFSEPHAR 145
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NLL+ G ++++DFG A+ +
Sbjct: 146 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----K 193
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 194 GRTWXLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 229
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 30 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAH 144
+ E R+L+ + ++ L F ++ +Y++MEY GG +M +F A
Sbjct: 90 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYAPGG--EMFSHLRRIGRFXEPHAR 144
Query: 145 GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ 204
Y Q++ EYLHS +I++D+KP NL++ G +K++DFG A+ +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLC 199
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 200 GTPEYLAPEII--LSKGYNKAVDWWALGVLI 228
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 30 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + ++ L F ++ +Y++MEY GG +M S P+ +
Sbjct: 90 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFSEPHAR 144
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NLL+ G ++++DFG A+ +
Sbjct: 145 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----K 192
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 193 GRTWXLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 228
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ G +LGEGS+ V + T A+KI +K+ + + N V RE ++ L H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHP 89
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGLEYL 157
+ L F +D +K+Y + Y G ++L F Y +++ LEYL
Sbjct: 90 FFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYL 145
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
H +GIIH+D+KP N+LL D ++I+DFG A+ L + G+ + +PE+
Sbjct: 146 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL--- 202
Query: 218 LPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 203 LTEKSACKSSDLWALGCII 221
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 107
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 108 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 156
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + G+P + APEI
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII- 210
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 211 -LSKGYNKAVDWWALGVLI 228
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 30 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTL 89
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + ++ L F ++ +Y++MEY GG +M S P+ +
Sbjct: 90 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYAPGG--EMFSHLRRIGRFSEPHAR 144
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NL++ G ++++DFG+A+ +
Sbjct: 145 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV-----K 192
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 193 GRTWXLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 228
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 107
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 108 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 156
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + G+P + APEI
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII- 210
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 211 -LSKGYNKAVDWWALGVLI 228
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 31 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 90
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + + L F ++ +Y++MEY GG +M S P+ +
Sbjct: 91 N-EKRILQAVNFPFLTKLEFSFKDN--SNLYMVMEYAPGG--EMFSHLRRIGRFSEPHAR 145
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NL++ G +K++DFG A+ +
Sbjct: 146 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----K 193
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 194 GRTWXLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 229
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 101/193 (52%), Gaps = 10/193 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
LG+G + K E+ D++T A KI K L + P+ + EI + + L H++V+G
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-PHQREKMSMEISIHRSLAHQHVVGF 106
Query: 104 VDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDGLEYLHSQGI 162
F ++ +++++E C + +L+ +K +A Y Q++ G +YLH +
Sbjct: 107 HGFFEDN--DFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 162
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
IH+D+K GNL L D +KI DFG+A ++ + G+P + APE+ + +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLSK--KGH 218
Query: 223 GYKVDIWSSGVTL 235
++VD+WS G +
Sbjct: 219 SFEVDVWSIGCIM 231
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 101/193 (52%), Gaps = 10/193 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
LG+G + K E+ D++T A KI K L + P+ + EI + + L H++V+G
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-PHQREKMSMEISIHRSLAHQHVVGF 104
Query: 104 VDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDGLEYLHSQGI 162
F ++ +++++E C + +L+ +K +A Y Q++ G +YLH +
Sbjct: 105 HGFFEDN--DFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 160
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS 222
IH+D+K GNL L D +KI DFG+A ++ + G+P + APE+ + +
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLSK--KGH 216
Query: 223 GYKVDIWSSGVTL 235
++VD+WS G +
Sbjct: 217 SFEVDVWSIGCIM 229
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 22/203 (10%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG G G V +D++ C + V I KK + P + REI++++ L H N++ +
Sbjct: 19 LGCGGNGLVFSAVDND--CDKRVAI--KKIVLTDPQSVKHALREIKIIRRLDHDNIVKVF 74
Query: 105 DVFVNDKKQ------------KMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLD 152
++ Q +Y++ EY L ++L+ P + A + QLL
Sbjct: 75 EILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLE---EHARLFMYQLLR 131
Query: 153 GLEYLHSQGIIHKDIKPGNLLL-TLDGTLKISDFGVAESLD-MFLHDDTITTSQGSPVFQ 210
GL+Y+HS ++H+D+KP NL + T D LKI DFG+A +D + H ++ + ++
Sbjct: 132 GLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYR 191
Query: 211 APEIANGLPEISGYKVDIWSSGV 233
+P + P +D+W++G
Sbjct: 192 SPRLLLS-PNNYTKAIDMWAAGC 213
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 31 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 90
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + + L F ++ +Y++MEY GG +M S P+ +
Sbjct: 91 N-EKRILQAVNFPFLTKLEFSFKDN--SNLYMVMEYAPGG--EMFSHLRRIGRFSEPHAR 145
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NL++ G +K++DFG A+ +
Sbjct: 146 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----K 193
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 194 GRTWXLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 229
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 94
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 95 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 143
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + G+P + APEI
Sbjct: 144 LHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII- 197
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 198 -LSKGYNKAVDWWALGVLI 215
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKK---KLQRIPNGEINVDREIRLLKML 95
+ G +LGEGS+ V + T A+KI +K+ K ++P V RE ++ L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMSRL 87
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H + L F +D +K+Y + Y G ++L F Y +++ L
Sbjct: 88 DHPFFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSAL 143
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
EYLH +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 144 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
Query: 215 ANGLPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 204 ---LTEKSACKSSDLWALGCII 222
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 30 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKK 137
+ E R+L+ + ++ L F ++ +Y++MEY GG +M S P+ +
Sbjct: 90 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYAPGG--EMFSHLRRIGRFSEPHAR 144
Query: 138 FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
F Y Q++ EYLHS +I++D+KP NL++ G ++++DFG A+ +
Sbjct: 145 F-------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV-----K 192
Query: 198 DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 193 GRTWXLCGTPEYLAPEII--LSKGYNKAVDWWALGVLI 228
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 44 LLGEGSYGKV---KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNV 100
+LG+G YGKV +++ + T A+K+ KK + R + E +L+ ++H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 101 IGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
+ L+ F K +YLI+EY GG + + F A Y ++ L +LH +
Sbjct: 84 VDLIYAFQTGGK--LYLILEYLSGG-ELFMQLEREGIFMEDTACFYLAEISMALGHLHQK 140
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT-TSQGSPVFQAPEIANGLP 219
GII++D+KP N++L G +K++DFG+ + +HD T+T T G+ + APEI +
Sbjct: 141 GIIYRDLKPENIMLNHQGHVKLTDFGLCKE---SIHDGTVTHTFCGTIEYMAPEIL--MR 195
Query: 220 EISGYKVDIWSSGVTL 235
VD WS G +
Sbjct: 196 SGHNRAVDWWSLGALM 211
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 13/192 (6%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 107
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
F ++ +Y++MEY GG +M +F A Y Q++ EYLHS +I
Sbjct: 108 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
++D+KP NLL+ G ++++DFG A+ + G+P + APEI L +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII--LSKGYN 216
Query: 224 YKVDIWSSGVTL 235
VD W+ GV +
Sbjct: 217 KAVDWWALGVLI 228
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 13/192 (6%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + ET A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 100
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
F ++ +Y++MEY GG +M +F A Y Q++ EYLHS +I
Sbjct: 101 FSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 156
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
++D+KP NLL+ G ++++DFG A+ + G+P + APEI L +
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII--LSKGYN 209
Query: 224 YKVDIWSSGVTL 235
VD W+ GV +
Sbjct: 210 KAVDWWALGVLI 221
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKK---KLQRIPNGEINVDREIRLLKML 95
+ G +LGEGS+ V + T A+KI +K+ K ++P V RE ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMSRL 89
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLDGL 154
H + L F +D +K+Y + Y G L + F Y +++ L
Sbjct: 90 DHPFFVKLYFTFQDD--EKLYFGLSYAKNGCLLKYIRKI--GSFDETCTRFYTAEIVSAL 145
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
EYLH +GIIH+D+KP N+LL D ++I+DFG A+ L + G+ + +PE+
Sbjct: 146 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 215 ANGLPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 206 ---LTEKSASKSSDLWALGCII 224
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKK---KLQRIPNGEINVDREIRLLKML 95
+ G +LGEGS+ V + T A+KI +K+ K ++P V RE ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMSRL 89
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H + L F +D +K+Y + Y G ++L F Y +++ L
Sbjct: 90 DHPFFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
EYLH +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 146 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 215 ANGLPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 206 ---LTEKSAXKSSDLWALGCII 224
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRI-PNGEINVDREIRLLKMLQHR 98
+ G++LG+G +G+ ++ ET ++ K+L R + +E+++++ L+H
Sbjct: 13 IHGEVLGKGCFGQAIKVTHRET-----GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHP 67
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
NV+ + V DK+ + I EY GG + + ++P Q + + G+ YLH
Sbjct: 68 NVLKFIGVLYKDKR--LNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH 125
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVA----------ESLDMFLHDDTIT--TSQGS 206
S IIH+D+ N L+ + + ++DFG+A E L D T G+
Sbjct: 126 SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 207 PVFQAPEIANGLPEISGYKVDIWSSGVTL 235
P + APE+ NG KVD++S G+ L
Sbjct: 186 PYWMAPEMING--RSYDEKVDVFSFGIVL 212
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 19/208 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQ-HR 98
+ +LLGEG+Y KV+ + + AVKI +K+ + V RE+ L Q ++
Sbjct: 16 LTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQ----AGHSRSRVFREVETLYQCQGNK 71
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N++ L++ F +D + YL+ E GG + K F +A + L++LH
Sbjct: 72 NILELIEFFEDDTR--FYLVFEKLQGG-SILAHIQKQKHFNEREASRVVRDVAAALDFLH 128
Query: 159 SQGIIHKDIKPGNLLLTLD---GTLKISDFGVAESLDMFLHDDTITTSQ-----GSPVFQ 210
++GI H+D+KP N+L +KI DF + + + ITT + GS +
Sbjct: 129 TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYM 188
Query: 211 APEIANGLPEISGY---KVDIWSSGVTL 235
APE+ + + + + D+WS GV L
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVL 216
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ G +LGEGS+ V + T A+KI +K+ + + N V RE ++ L H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHP 74
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGLEYL 157
+ L F +D +K+Y + Y G ++L F Y +++ LEYL
Sbjct: 75 FFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYL 130
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
H +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 131 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL--- 187
Query: 218 LPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 188 LTEKSACKSSDLWALGCII 206
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKK---KLQRIPNGEINVDREIRLLKML 95
+ G +LGEGS+ V + T A+KI +K+ K ++P V RE ++ L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMSRL 87
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H + L F +D +K+Y + Y G ++L F Y +++ L
Sbjct: 88 DHPFFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSAL 143
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
EYLH +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 144 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 215 ANGLPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 204 ---LTEKSACKSSDLWALGCII 222
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKK---KLQRIPNGEINVDREIRLLKML 95
+ G +LGEGS+ V + T A+KI +K+ K ++P V RE ++ L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMSRL 87
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H + L F +D +K+Y + Y G ++L F Y +++ L
Sbjct: 88 DHPFFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSAL 143
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
EYLH +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 144 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 215 ANGLPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 204 ---LTEKSACKSSDLWALGCII 222
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKK---KLQRIPNGEINVDREIRLLKML 95
+ G +LGEGS+ V + T A+KI +K+ K ++P V RE ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMSRL 89
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H + L F +D +K+Y + Y G ++L F Y +++ L
Sbjct: 90 DHPFFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
EYLH +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 146 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 215 ANGLPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 206 ---LTEKSACKSSDLWALGCII 224
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKK---KLQRIPNGEINVDREIRLLKML 95
+ G +LGEGS+ V + T A+KI +K+ K ++P V RE ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMSRL 89
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H + L F +D +K+Y + Y G ++L F Y +++ L
Sbjct: 90 DHPFFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
EYLH +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 146 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 215 ANGLPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 206 ---LTEKSACKSSDLWALGCII 224
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKK---KLQRIPNGEINVDREIRLLKML 95
+ G +LGEGS+ V + T A+KI +K+ K ++P V RE ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMSRL 89
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H + L F +D +K+Y + Y G ++L F Y +++ L
Sbjct: 90 DHPFFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
EYLH +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 146 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 215 ANGLPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 206 ---LTEKSACKSSDLWALGCII 224
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKK---KLQRIPNGEINVDREIRLLKML 95
+ G +LGEGS+ V + T A+KI +K+ K ++P V RE ++ L
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMSRL 90
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H + L F +D +K+Y + Y G ++L F Y +++ L
Sbjct: 91 DHPFFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSAL 146
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
EYLH +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 147 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
Query: 215 ANGLPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 207 ---LTEKSACKSSDLWALGCII 225
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKK---KLQRIPNGEINVDREIRLLKML 95
+ G +LGEGS+ V + T A+KI +K+ K ++P V RE ++ L
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMSRL 94
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H + L F +D +K+Y + Y G ++L F Y +++ L
Sbjct: 95 DHPFFVKLYFCFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSAL 150
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
EYLH +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 151 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 215 ANGLPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 211 ---LTEKSACKSSDLWALGCII 229
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKK---KLQRIPNGEINVDREIRLLKML 95
+ G +LGEGS+ V + T A+KI +K+ K ++P V RE ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMSRL 89
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H + L F +D +K+Y + Y G ++L F Y +++ L
Sbjct: 90 DHPFFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
EYLH +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 146 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 215 ANGLPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 206 ---LTEKSACKSSDLWALGCII 224
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIGL 103
LG+G++G V EM + L ++ KKLQ + + +REI +LK LQH N++
Sbjct: 18 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
V + ++ + LIMEY G L+D L + I + Y Q+ G+EYL ++
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-KLLQYTSQICKGMEYLGTKRY 135
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF-QAPEIANGLPEI 221
IH+D+ N+L+ + +KI DFG+ + L + SP+F APE L E
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPE---SLTE- 191
Query: 222 SGYKV--DIWSSGVTL 235
S + V D+WS GV L
Sbjct: 192 SKFSVASDVWSFGVVL 207
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 31 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 90
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAH 144
+ E R+L+ + ++ L F ++ +Y++MEY GG +M +F A
Sbjct: 91 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFXEPHAR 145
Query: 145 GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ 204
Y Q++ EYLHS +I++D+KP NLL+ G ++++DFG A+ +
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLC 200
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 201 GTPEYLAPEII--LSKGYNKAVDWWALGVLI 229
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ G +LGEGS+ V + T A+KI +K+ + + N V RE ++ L H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHP 68
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGLEYL 157
+ L F +D +K+Y + Y G ++L F Y +++ LEYL
Sbjct: 69 FFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYL 124
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
H +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 125 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL--- 181
Query: 218 LPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 182 LTEKSACKSSDLWALGCII 200
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 30 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAH 144
+ E R+L+ + ++ L F ++ +Y++MEY GG +M +F A
Sbjct: 90 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFXEPHAR 144
Query: 145 GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ 204
Y Q++ EYLHS +I++D+KP NLL+ G ++++DFG A+ +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLC 199
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 200 GTPEYLAPEII--LSKGYNKAVDWWALGVLI 228
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 13/192 (6%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 102
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
F ++ +Y++MEY GG +M +F A Y Q++ EYLHS +I
Sbjct: 103 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 158
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
++D+KP NLL+ G ++++DFG A+ + G+P + APEI L +
Sbjct: 159 YRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII--LSKGYN 211
Query: 224 YKVDIWSSGVTL 235
VD W+ GV +
Sbjct: 212 KAVDWWALGVLI 223
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 30 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAH 144
+ E R+L+ + ++ L F ++ +Y++MEY GG +M +F A
Sbjct: 90 N-EKRILQAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGG--EMFSHLRRIGRFXEPHAR 144
Query: 145 GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ 204
Y Q++ EYLHS +I++D+KP NLL+ G ++++DFG A+ +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLC 199
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 200 GTPEYLAPEII--LSKGYNKAVDWWALGVLI 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ G +LGEGS+ V + T A+KI +K+ + + N V RE ++ L H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHP 69
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGLEYL 157
+ L F +D +K+Y + Y G ++L F Y +++ LEYL
Sbjct: 70 FFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYL 125
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
H +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 126 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL--- 182
Query: 218 LPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 183 LTEKSACKSSDLWALGCII 201
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 13/192 (6%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 107
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
F ++ +Y++MEY GG +M +F A Y Q++ EYLHS +I
Sbjct: 108 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
++D+KP NLL+ G ++++DFG A+ + G+P + APEI L +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII--LSKGYN 216
Query: 224 YKVDIWSSGVTL 235
VD W+ GV +
Sbjct: 217 KAVDWWALGVLI 228
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ G +LGEGS+ V + T A+KI +K+ + + N V RE ++ L H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHP 89
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGLEYL 157
+ L F +D +K+Y + Y G ++L F Y +++ LEYL
Sbjct: 90 FFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYL 145
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
H +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 146 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL--- 202
Query: 218 LPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 203 LTEKSACKSSDLWALGCII 221
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ G +LGEGS+ V + T A+KI +K+ + + N V RE ++ L H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHP 67
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGLEYL 157
+ L F +D +K+Y + Y G ++L F Y +++ LEYL
Sbjct: 68 FFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYL 123
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
H +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 124 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL--- 180
Query: 218 LPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 181 LTEKSACKSSDLWALGCII 199
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 13/192 (6%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 107
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
F ++ +Y++MEY GG +M +F A Y Q++ EYLHS +I
Sbjct: 108 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
++D+KP NLL+ G ++++DFG A+ + G+P + APEI L +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII--LSKGYN 216
Query: 224 YKVDIWSSGVTL 235
VD W+ GV +
Sbjct: 217 KAVDWWALGVLI 228
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 13/192 (6%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 128
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
F ++ +Y++MEY GG +M +F A Y Q++ EYLHS +I
Sbjct: 129 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
++D+KP NLL+ G ++++DFG A+ + G+P + APEI L +
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII--LSKGYN 237
Query: 224 YKVDIWSSGVTL 235
VD W+ GV +
Sbjct: 238 KAVDWWALGVLI 249
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKK---KLQRIPNGEINVDREIRLLKML 95
+ G +LGEGS+ V + T A+KI +K+ K ++P V RE ++ L
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMSRL 92
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H + L F +D +K+Y + Y G ++L F Y +++ L
Sbjct: 93 DHPFFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSAL 148
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
EYLH +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 149 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
Query: 215 ANGLPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 209 ---LTEKSACKSSDLWALGCII 227
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 13/192 (6%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 107
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
F ++ +Y++MEY GG +M +F A Y Q++ EYLHS +I
Sbjct: 108 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
++D+KP NLL+ G ++++DFG A+ + G+P + APEI L +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII--LSKGYN 216
Query: 224 YKVDIWSSGVTL 235
VD W+ GV +
Sbjct: 217 KAVDWWALGVLI 228
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+ G +LGEGS+ V + T A+KI +K+ + + N V RE ++ L H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHP 70
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGLEYL 157
+ L F +D +K+Y + Y G ++L F Y +++ LEYL
Sbjct: 71 FFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYL 126
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
H +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 127 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL--- 183
Query: 218 LPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 184 LTEKSACKSSDLWALGCII 202
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 41/219 (18%)
Query: 44 LLGEGSYGKV---KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNV 100
+LG+G++G+V + LDS + + KK++ + E+ LL L H+ V
Sbjct: 13 VLGQGAFGQVVKARNALDS--------RYYAIKKIRHTEEKLSTILSEVXLLASLNHQYV 64
Query: 101 IGLVDVFVN-----------DKKQKMYLIMEYCVG-GLQDMLDSTPY--KKFPIWQAHGY 146
+ ++ KK +++ EYC L D++ S ++ W+
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL--- 121
Query: 147 FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAE----SLDMFLHD----- 197
F Q+L+ L Y+HSQGIIH+++KP N+ + +KI DFG+A+ SLD+ D
Sbjct: 122 FRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 198 ---DTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGV 233
D +T++ G+ + A E+ +G + K+D +S G+
Sbjct: 182 GSSDNLTSAIGTAXYVATEVLDGTGHYNE-KIDXYSLGI 219
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 26 YDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINV 85
++N + ++ LG GS+G+V + ET A+KI K+K+ ++ E +
Sbjct: 31 WENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 90
Query: 86 DREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAH 144
+ E R+L+ + + L F ++ +Y++MEY GG +M +F A
Sbjct: 91 N-EKRILQAVNFPFLTKLEFSFKDN--SNLYMVMEYAPGG--EMFSHLRRIGRFXEPHAR 145
Query: 145 GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ 204
Y Q++ EYLHS +I++D+KP NL++ G +K++DFG A+ +
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLC 200
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P + APEI L + VD W+ GV +
Sbjct: 201 GTPEYLAPEII--LSKGYNKAVDWWALGVLI 229
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 28/205 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRR-----------AVKIFKKKKLQRIPNGEINVDREIRLLK 93
LGEG +GKV+ LCR AVK K + N ++ +EI +L+
Sbjct: 29 LGEGHFGKVE-------LCRYDPEGDNTGEQVAVKSLKP---ESGGNHIADLKKEIEILR 78
Query: 94 MLQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLD 152
L H N++ + D + LIME+ G L++ L K + Q Y +Q+
Sbjct: 79 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICK 137
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF-QA 211
G++YL S+ +H+D+ N+L+ + +KI DFG+ ++++ T+ + SPVF A
Sbjct: 138 GMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 197
Query: 212 PEIANGLPEISGY-KVDIWSSGVTL 235
PE L + Y D+WS GVTL
Sbjct: 198 PEC---LMQSKFYIASDVWSFGVTL 219
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 45 LGEGSYGKVK-EMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
LGEG +GKV D + K K P +EI +L+ L H ++I
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
+ + L+MEY +G L+D L P + Q + Q+ +G+ YLH+Q
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQHY 155
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQ-APEIANGLPEI 221
IH+D+ N+LL D +KI DFG+A+++ + SPVF APE L E
Sbjct: 156 IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPEC---LKEY 212
Query: 222 SGYKV-DIWSSGVTL 235
Y D+WS GVTL
Sbjct: 213 KFYYASDVWSFGVTL 227
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 28/205 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRR-----------AVKIFKKKKLQRIPNGEINVDREIRLLK 93
LGEG +GKV+ LCR AVK K + N ++ +EI +L+
Sbjct: 17 LGEGHFGKVE-------LCRYDPEGDNTGEQVAVKSLKP---ESGGNHIADLKKEIEILR 66
Query: 94 MLQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLD 152
L H N++ + D + LIME+ G L++ L K + Q Y +Q+
Sbjct: 67 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICK 125
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQ-A 211
G++YL S+ +H+D+ N+L+ + +KI DFG+ ++++ T+ + SPVF A
Sbjct: 126 GMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 185
Query: 212 PEIANGLPEISGY-KVDIWSSGVTL 235
PE L + Y D+WS GVTL
Sbjct: 186 PEC---LMQSKFYIASDVWSFGVTL 207
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 31/201 (15%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 107
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 108 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 156
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NL++ G ++++DFG A+ + G+P + APEI
Sbjct: 157 LHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIII 211
Query: 217 GLPEISGYK--VDIWSSGVTL 235
GY VD W+ GV +
Sbjct: 212 S----KGYNKAVDWWALGVLI 228
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + ET A+KI K+K+ ++ E ++ E R+ + + ++ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRIQQAVNFPFLVKLE 108
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y+++EY GG +M S P+ +F Y Q++ EY
Sbjct: 109 FSFKDN--SNLYMVLEYAPGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 157
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G +K++DFG A+ + G+P + APEI
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYLAPEII- 211
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 212 -LSKGYNKAVDWWALGVLI 229
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Query: 45 LGEGSYGKVK-EMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
LGEG +GKV D + K K P +EI +L+ L H ++I
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
+ ++ + L+MEY +G L+D L P + Q + Q+ +G+ YLHSQ
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHSQHY 138
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQ-APEIANGLPEI 221
IH+++ N+LL D +KI DFG+A+++ + SPVF APE L E
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC---LKEY 195
Query: 222 SGYKV-DIWSSGVTL 235
Y D+WS GVTL
Sbjct: 196 KFYYASDVWSFGVTL 210
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 107
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 108 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 156
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + G+P APEI
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEALAPEII- 210
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 211 -LSKGYNKAVDWWALGVLI 228
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 22/211 (10%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+++ D+LG+G+ V +T A+K+F R + ++ RE +LK L H+
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM---REFEVLKKLNHK 67
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLD---GL 154
N++ L + + LIME+C G L +L+ P + + ++ + + L D G+
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEE-PSNAYGLPESE-FLIVLRDVVGGM 125
Query: 155 EYLHSQGIIHKDIKPGNLLLTL--DG--TLKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
+L GI+H++IKPGN++ + DG K++DFG A L+ D+ + G+ +
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE---DDEQFVSLYGTEEYL 182
Query: 211 APEIANGL------PEISGYKVDIWSSGVTL 235
P++ + G VD+WS GVT
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTF 213
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIGL 103
LG+G++G V EM + L ++ KKLQ + + +REI +LK LQH N++
Sbjct: 19 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
V + ++ + LIMEY G L+D L ++ + Y Q+ G+EYL ++
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRY 136
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF-QAPEIANGLPEI 221
IH+++ N+L+ + +KI DFG+ + L + SP+F APE L E
Sbjct: 137 IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPE---SLTE- 192
Query: 222 SGYKV--DIWSSGVTL 235
S + V D+WS GV L
Sbjct: 193 SKFSVASDVWSFGVVL 208
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 16/198 (8%)
Query: 45 LGEGSYGKVK----EMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNV 100
LGEG +GKV + + T AVK K+ ++ +G REI +L+ L H ++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSG---WQREIEILRTLYHEHI 72
Query: 101 IGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHS 159
+ + ++ + L+MEY +G L+D L P + Q + Q+ +G+ YLH+
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHA 129
Query: 160 QGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQ-APEIANGL 218
Q IH+ + N+LL D +KI DFG+A+++ + SPVF APE L
Sbjct: 130 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC---L 186
Query: 219 PEISGYKV-DIWSSGVTL 235
E Y D+WS GVTL
Sbjct: 187 KECKFYYASDVWSFGVTL 204
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 16/198 (8%)
Query: 45 LGEGSYGKVK----EMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNV 100
LGEG +GKV + + T AVK K+ ++ +G REI +L+ L H ++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSG---WQREIEILRTLYHEHI 73
Query: 101 IGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHS 159
+ + ++ + L+MEY +G L+D L P + Q + Q+ +G+ YLH+
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHA 130
Query: 160 QGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQ-APEIANGL 218
Q IH+ + N+LL D +KI DFG+A+++ + SPVF APE L
Sbjct: 131 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC---L 187
Query: 219 PEISGYKV-DIWSSGVTL 235
E Y D+WS GVTL
Sbjct: 188 KECKFYYASDVWSFGVTL 205
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V + E+ A+KI K+K+ ++ E ++ E R+L+ + ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLE 107
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLD--------STPYKKFPIWQAHGYFLQLLDGLEY 156
F ++ +Y++MEY GG +M S P+ +F Y Q++ EY
Sbjct: 108 FSFKDN--SNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------YAAQIVLTFEY 156
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIAN 216
LHS +I++D+KP NLL+ G ++++DFG A+ + G+P + AP I
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPAII- 210
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + VD W+ GV +
Sbjct: 211 -LSKGYNKAVDWWALGVLI 228
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIGL 103
LG+G++G V EM + L ++ KKLQ + + +REI +LK LQH N++
Sbjct: 21 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
V + ++ + LIME+ G L++ L + I + Y Q+ G+EYL ++
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI-KLLQYTSQICKGMEYLGTKRY 138
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF-QAPEIANGLPEI 221
IH+D+ N+L+ + +KI DFG+ + L + SP+F APE L E
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE---SLTE- 194
Query: 222 SGYKV--DIWSSGVTL 235
S + V D+WS GV L
Sbjct: 195 SKFSVASDVWSFGVVL 210
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
+ +Y + + LG+G++ V+ + A I KKL ++RE R+
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS--ARDHQKLEREARIC 64
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQL 150
++L+H N++ L D + YLI + GG +D++ Y + A Q+
Sbjct: 65 RLLKHPNIVRLHDSISEEGHH--YLIFDLVTGGELFEDIVAREYYSEA---DASHCIQQI 119
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLT--LDG-TLKISDFGVAESLDMFLHDDTITTSQGSP 207
L+ + + H G++H+++KP NLLL L G +K++DFG+A +++ G+P
Sbjct: 120 LEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTP 177
Query: 208 VFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ +PE+ P G VD+W+ GV L
Sbjct: 178 GYLSPEVLRKDP--YGKPVDLWACGVIL 203
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 44 LLGEGSYGKV---KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNV 100
+LG+G YGKV +++ + T A+K+ KK + R + E +L+ ++H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 101 IGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
+ L+ F K +YLI+EY GG + + F A Y ++ L +LH +
Sbjct: 84 VDLIYAFQTGGK--LYLILEYLSGG-ELFMQLEREGIFMEDTACFYLAEISMALGHLHQK 140
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTS-QGSPVFQAPEIANGLP 219
GII++D+KP N++L G +K++DFG+ + +HD T+T G+ + APEI +
Sbjct: 141 GIIYRDLKPENIMLNHQGHVKLTDFGLCKE---SIHDGTVTHXFCGTIEYMAPEIL--MR 195
Query: 220 EISGYKVDIWSSGVTL 235
VD WS G +
Sbjct: 196 SGHNRAVDWWSLGALM 211
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 16/202 (7%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKK---KLQRIPNGEINVDREIRLLKML 95
+ G +LGEGS+ + T A+KI +K+ K ++P V RE ++ L
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMSRL 87
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGL 154
H + L F +D +K+Y + Y G ++L F Y +++ L
Sbjct: 88 DHPFFVKLYFTFQDD--EKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSAL 143
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
EYLH +GIIH+D+KP N+LL D ++I+DFG A+ L G+ + +PE+
Sbjct: 144 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 215 ANGLPEISGYK-VDIWSSGVTL 235
L E S K D+W+ G +
Sbjct: 204 ---LTEKSACKSSDLWALGCII 222
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRL-LKMLQHR 98
V +LG G GKV ++ + +R + F K LQ P RE+ L + Q
Sbjct: 19 VTSQVLGLGINGKVLQIFN-----KRTQEKFALKMLQDCPKAR----REVELHWRASQCP 69
Query: 99 NVIGLVDVFVN--DKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQAHGYFLQLL 151
+++ +VDV+ N ++ + ++ME GG +QD D + F +A +
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIG 125
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLT---LDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
+ ++YLHS I H+D+KP NLL T + LK++DFG A+ +++TT +P
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---SHNSLTTPCYTPY 182
Query: 209 FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ PE D+WS GV +
Sbjct: 183 YVAPEVLG--PEKYDKSCDMWSLGVIM 207
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRL-LKMLQHR 98
V +LG G GKV ++ + +R + F K LQ P RE+ L + Q
Sbjct: 65 VTSQVLGLGINGKVLQIFN-----KRTQEKFALKMLQDCPKAR----REVELHWRASQCP 115
Query: 99 NVIGLVDVFVN--DKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQAHGYFLQLL 151
+++ +VDV+ N ++ + ++ME GG +QD D + F +A +
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIG 171
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLT---LDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
+ ++YLHS I H+D+KP NLL T + LK++DFG A+ +++TT +P
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---SHNSLTTPCYTPY 228
Query: 209 FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ PE D+WS GV +
Sbjct: 229 YVAPEVLG--PEKYDKSCDMWSLGVIM 253
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRL-LKMLQHR 98
V +LG G GKV ++ + +R + F K LQ P RE+ L + Q
Sbjct: 20 VTSQVLGLGINGKVLQIFN-----KRTQEKFALKMLQDCPKAR----REVELHWRASQCP 70
Query: 99 NVIGLVDVFVN--DKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQAHGYFLQLL 151
+++ +VDV+ N ++ + ++ME GG +QD D + F +A +
Sbjct: 71 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIG 126
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLT---LDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
+ ++YLHS I H+D+KP NLL T + LK++DFG A+ +++TT +P
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---SHNSLTTPCYTPY 183
Query: 209 FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ PE D+WS GV +
Sbjct: 184 YVAPEVLG--PEKYDKSCDMWSLGVIM 208
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRL-LKMLQHR 98
V +LG G GKV ++ + +R + F K LQ P RE+ L + Q
Sbjct: 25 VTSQVLGLGINGKVLQIFN-----KRTQEKFALKMLQDCPKAR----REVELHWRASQCP 75
Query: 99 NVIGLVDVFVN--DKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQAHGYFLQLL 151
+++ +VDV+ N ++ + ++ME GG +QD D + F +A +
Sbjct: 76 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIG 131
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLT---LDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
+ ++YLHS I H+D+KP NLL T + LK++DFG A+ +++TT +P
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---SHNSLTTPCYTPY 188
Query: 209 FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ PE D+WS GV +
Sbjct: 189 YVAPEVLG--PEKYDKSCDMWSLGVIM 213
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 69/120 (57%), Gaps = 13/120 (10%)
Query: 116 YLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLT 175
Y++MEY VGG L + +K P+ +A Y L++L L YLHS G+++ D+KP N++LT
Sbjct: 160 YIVMEY-VGG--QSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT 216
Query: 176 LDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ LK+ D G ++ F + G+P FQAPEI P ++ DI++ G TL
Sbjct: 217 -EEQLKLIDLGAVSRINSFGY------LYGTPGFQAPEIVRTGPTVA---TDIYTVGRTL 266
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRL-LKMLQHR 98
V +LG G GKV ++ + +R + F K LQ P RE+ L + Q
Sbjct: 21 VTSQVLGLGINGKVLQIFN-----KRTQEKFALKMLQDCPKAR----REVELHWRASQCP 71
Query: 99 NVIGLVDVFVN--DKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQAHGYFLQLL 151
+++ +VDV+ N ++ + ++ME GG +QD D + F +A +
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIG 127
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLT---LDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
+ ++YLHS I H+D+KP NLL T + LK++DFG A+ +++TT +P
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---SHNSLTTPCYTPY 184
Query: 209 FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ PE D+WS GV +
Sbjct: 185 YVAPEVLG--PEKYDKSCDMWSLGVIM 209
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRL-LKMLQHR 98
V +LG G GKV ++ + +R + F K LQ P RE+ L + Q
Sbjct: 21 VTSQVLGLGINGKVLQIFN-----KRTQEKFALKMLQDCPKAR----REVELHWRASQCP 71
Query: 99 NVIGLVDVFVN--DKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQAHGYFLQLL 151
+++ +VDV+ N ++ + ++ME GG +QD D + F +A +
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIG 127
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLT---LDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
+ ++YLHS I H+D+KP NLL T + LK++DFG A+ +++TT +P
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---SHNSLTTPCYTPY 184
Query: 209 FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ PE D+WS GV +
Sbjct: 185 YVAPEVLG--PEKYDKSCDMWSLGVIM 209
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRL-LKMLQHR 98
V +LG G GKV ++ + +R + F K LQ P RE+ L + Q
Sbjct: 27 VTSQVLGLGINGKVLQIFN-----KRTQEKFALKMLQDCPKAR----REVELHWRASQCP 77
Query: 99 NVIGLVDVFVN--DKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQAHGYFLQLL 151
+++ +VDV+ N ++ + ++ME GG +QD D + F +A +
Sbjct: 78 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIG 133
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLT---LDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
+ ++YLHS I H+D+KP NLL T + LK++DFG A+ +++TT +P
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---SHNSLTTPCYTPY 190
Query: 209 FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ PE D+WS GV +
Sbjct: 191 YVAPEVLG--PEKYDKSCDMWSLGVIM 215
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRL-LKMLQHR 98
V +LG G GKV ++ + +R + F K LQ P RE+ L + Q
Sbjct: 71 VTSQVLGLGINGKVLQIFN-----KRTQEKFALKMLQDCPKAR----REVELHWRASQCP 121
Query: 99 NVIGLVDVFVN--DKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQAHGYFLQLL 151
+++ +VDV+ N ++ + ++ME GG +QD D + F +A +
Sbjct: 122 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIG 177
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLT---LDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
+ ++YLHS I H+D+KP NLL T + LK++DFG A+ +++TT +P
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---SHNSLTTPCYTPY 234
Query: 209 FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ PE D+WS GV +
Sbjct: 235 YVAPEVLG--PEKYDKSCDMWSLGVIM 259
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRL-LKMLQHR 98
V +LG G GKV ++ + +R + F K LQ P RE+ L + Q
Sbjct: 26 VTSQVLGLGINGKVLQIFN-----KRTQEKFALKMLQDCPKAR----REVELHWRASQCP 76
Query: 99 NVIGLVDVFVN--DKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQAHGYFLQLL 151
+++ +VDV+ N ++ + ++ME GG +QD D + F +A +
Sbjct: 77 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIG 132
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLT---LDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
+ ++YLHS I H+D+KP NLL T + LK++DFG A+ +++TT +P
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---SHNSLTTPCYTPY 189
Query: 209 FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ PE D+WS GV +
Sbjct: 190 YVAPEVLG--PEKYDKSCDMWSLGVIM 214
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 101/201 (50%), Gaps = 25/201 (12%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML-------Q 96
+LG+GS+GKV T A+KI KK + + + E + E R+L +L Q
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTM-VEKRVLALLDKPPFLTQ 84
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEY 156
+ VD ++Y +MEY GG M KF QA Y ++ GL +
Sbjct: 85 LHSCFQTVD--------RLYFVMEYVNGG-DLMYHIQQVGKFKEPQAVFYAAEISIGLFF 135
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPEI 214
LH +GII++D+K N++L +G +KI+DFG+ + M D +TT + G+P + APEI
Sbjct: 136 LHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMM----DGVTTREFCGTPDYIAPEI 191
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
P G VD W+ GV L
Sbjct: 192 IAYQP--YGKSVDWWAYGVLL 210
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Query: 45 LGEGSYGKVK-EMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
LGEG +GKV D + K K P +EI +L+ L H ++I
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 104 VDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
+ ++ + L+MEY +G L+D L P + Q + Q+ +G+ YLH+Q
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQHY 138
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQ-APEIANGLPEI 221
IH+++ N+LL D +KI DFG+A+++ + SPVF APE L E
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC---LKEY 195
Query: 222 SGYKV-DIWSSGVTL 235
Y D+WS GVTL
Sbjct: 196 KFYYASDVWSFGVTL 210
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 45/234 (19%)
Query: 33 VKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR---EI 89
VK+ Y + L+G GSYG V D + A K KK+ R+ I+ R EI
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYD-----KNANKNVAIKKVNRMFEDLIDCKRILREI 78
Query: 90 RLLKMLQHRNVIGLVDVFVND---KKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
+L L+ +I L D+ + + K ++Y+++E L+ + K PI+ +
Sbjct: 79 TILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLF------KTPIFLTEQH 132
Query: 147 ----FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL----DMFLHDD 198
LL G +++H GIIH+D+KP N LL D ++KI DFG+A ++ D+ + +D
Sbjct: 133 VKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVND 192
Query: 199 -------------------TITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGV 233
+T+ + ++APE+ L E +DIWS+G
Sbjct: 193 LEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELI-LLQENYTNSIDIWSTGC 245
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRL-LKMLQHR 98
V +LG G GKV ++ + +R + F K LQ P RE+ L + Q
Sbjct: 35 VTSQVLGLGINGKVLQIFN-----KRTQEKFALKMLQDCPKAR----REVELHWRASQCP 85
Query: 99 NVIGLVDVFVN--DKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQAHGYFLQLL 151
+++ +VDV+ N ++ + ++ME GG +QD D + F +A +
Sbjct: 86 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIG 141
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLT---LDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
+ ++YLHS I H+D+KP NLL T + LK++DFG A+ +++TT +P
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---SHNSLTTPCYTPY 198
Query: 209 FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ PE D+WS GV +
Sbjct: 199 YVAPEVLG--PEKYDKSCDMWSLGVIM 223
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHR 98
+++ D+LG+G+ V +T A+K+F R + ++ RE +LK L H+
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM---REFEVLKKLNHK 67
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLD---GL 154
N++ L + + LIME+C G L +L+ P + + ++ + + L D G+
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEE-PSNAYGLPESE-FLIVLRDVVGGM 125
Query: 155 EYLHSQGIIHKDIKPGNLLLTL--DG--TLKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
+L GI+H++IKPGN++ + DG K++DFG A L+ D+ G+ +
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE---DDEQFVXLYGTEEYL 182
Query: 211 APEIANGL------PEISGYKVDIWSSGVTL 235
P++ + G VD+WS GVT
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTF 213
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 21/167 (12%)
Query: 83 INVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLD---STPYKKFP 139
++ REI LL+ L+H NVI L VF++ +K++L+ +Y L ++ ++ K P
Sbjct: 63 MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKP 122
Query: 140 IWQAHG----YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGT----LKISDFGVAESL 191
+ G Q+LDG+ YLH+ ++H+D+KP N+L+ +G +KI+D G A
Sbjct: 123 VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Query: 192 DMFLH-----DDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGV 233
+ L D + T ++APE+ G + +DIW+ G
Sbjct: 183 NSPLKPLADLDPVVVTFW----YRAPELLLGARHYTK-AIDIWAIGC 224
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 29/205 (14%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRL-LKMLQHR 98
V +LG G GKV ++ + +R + F K LQ P RE+ L + Q
Sbjct: 65 VTSQVLGLGINGKVLQIFN-----KRTQEKFALKXLQDCPKAR----REVELHWRASQCP 115
Query: 99 NVIGLVDVFVN-DKKQKMYLIMEYCVGG------LQDMLDSTPYKKFPIWQAHGYFLQLL 151
+++ +VDV+ N +K LI+ C+ G +QD D + F +A +
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGD----QAFTEREASEIXKSIG 171
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLT---LDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
+ ++YLHS I H+D+KP NLL T + LK++DFG A+ +++TT +P
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH---NSLTTPCYTPY 228
Query: 209 FQAPEIANGLPEISGYKVDIWSSGV 233
+ APE+ PE D WS GV
Sbjct: 229 YVAPEVLG--PEKYDKSCDXWSLGV 251
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 34/223 (15%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+ V+G LGEG++G+V E + + + AVK+ K ++ + I+ E+
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS---EME 85
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDS--TPYKKFPIWQAH-- 144
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P +F +H
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNP 143
Query: 145 ----------GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
Q+ G+EYL S+ IH+D+ N+L+T D +KI+DFG+A D+
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIH 201
Query: 195 LHDDTITTSQGS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
D T+ G PV + APE I ++ D+WS GV L
Sbjct: 202 HIDXXKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLL 242
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 27/212 (12%)
Query: 37 GKYVMGDLLGEGSYGKVKE--MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKM 94
+ + +++G G +GKV + E AVK + + I NV +E +L M
Sbjct: 7 AELTLEEIIGIGGFGKVYRAFWIGDEV----AVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 95 LQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGL 154
L+H N+I L V + K+ + L+ME+ GG + + S K+ P + +Q+ G+
Sbjct: 63 LKHPNIIALRGVCL--KEPNLCLVMEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGM 118
Query: 155 EYLHSQG---IIHKDIKPGNLLL--------TLDGTLKISDFGVAESLDMFLHDDTITTS 203
YLH + IIH+D+K N+L+ + LKI+DFG+A H T ++
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE----WHRTTKMSA 174
Query: 204 QGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ + APE+ + D+WS GV L
Sbjct: 175 AGAYAWMAPEVIRA--SMFSKGSDVWSYGVLL 204
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 15/217 (6%)
Query: 22 DQVIYDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRI-PN 80
D I++ + +K Y+ LG+G++G V E+ + L + K+LQ P+
Sbjct: 4 DPTIFEERHLK------YI--SQLGKGNFGSV-ELCRYDPLGDNTGALVAVKQLQHSGPD 54
Query: 81 GEINVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFP 139
+ + REI++LK L ++ V +Q + L+MEY G L+D L +
Sbjct: 55 QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH-RARLD 113
Query: 140 IWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
+ Y Q+ G+EYL S+ +H+D+ N+L+ + +KI+DFG+A+ L +
Sbjct: 114 ASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 173
Query: 200 ITTSQGSPVFQ-APEIANGLPEISGYKVDIWSSGVTL 235
+ SP+F APE + I + D+WS GV L
Sbjct: 174 VREPGQSPIFWYAPESLSD--NIFSRQSDVWSFGVVL 208
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 15/217 (6%)
Query: 22 DQVIYDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRI-PN 80
D I++ + +K Y+ LG+G++G V E+ + L + K+LQ P+
Sbjct: 16 DPTIFEERHLK------YI--SQLGKGNFGSV-ELCRYDPLGDNTGALVAVKQLQHSGPD 66
Query: 81 GEINVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFP 139
+ + REI++LK L ++ V +Q + L+MEY G L+D L +
Sbjct: 67 QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH-RARLD 125
Query: 140 IWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
+ Y Q+ G+EYL S+ +H+D+ N+L+ + +KI+DFG+A+ L +
Sbjct: 126 ASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 185
Query: 200 ITTSQGSPVFQ-APEIANGLPEISGYKVDIWSSGVTL 235
+ SP+F APE + I + D+WS GV L
Sbjct: 186 VREPGQSPIFWYAPESLSD--NIFSRQSDVWSFGVVL 220
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 31/223 (13%)
Query: 28 NKTIKVKMIGK--YVMGDLLGEGSYGKV--KEMLDSETLCRRAVKIFKKKKLQRIPNGEI 83
++ V ++GK + D+LG G+ G + + M D+ + AVK + +P
Sbjct: 13 DEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDV---AVK-------RILPECFS 62
Query: 84 NVDREIRLLKML-QHRNVIGLVDVFVNDK-KQKMYLIMEYCVGGLQDMLDSTPYKKFPIW 141
DRE++LL+ +H NVI F +K +Q Y+ +E C LQ+ ++ + +
Sbjct: 63 FADREVQLLRESDEHPNVI---RYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGL- 118
Query: 142 QAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTL---DGTLK--ISDFGVAESLDMFLH 196
+ Q GL +LHS I+H+D+KP N+L+++ G +K ISDFG+ + L + H
Sbjct: 119 EPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178
Query: 197 DDTITTSQGSPVFQ---APE-IANGLPEISGYKVDIWSSGVTL 235
+ + G P + APE ++ E Y VDI+S+G
Sbjct: 179 --SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVF 219
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 15/217 (6%)
Query: 22 DQVIYDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRI-PN 80
D I++ + +K Y+ LG+G++G V E+ + L + K+LQ P+
Sbjct: 3 DPTIFEERHLK------YI--SQLGKGNFGSV-ELCRYDPLGDNTGALVAVKQLQHSGPD 53
Query: 81 GEINVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFP 139
+ + REI++LK L ++ V +Q + L+MEY G L+D L +
Sbjct: 54 QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH-RARLD 112
Query: 140 IWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
+ Y Q+ G+EYL S+ +H+D+ N+L+ + +KI+DFG+A+ L +
Sbjct: 113 ASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 172
Query: 200 ITTSQGSPVFQ-APEIANGLPEISGYKVDIWSSGVTL 235
+ SP+F APE + I + D+WS GV L
Sbjct: 173 VREPGQSPIFWYAPESLSD--NIFSRQSDVWSFGVVL 207
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI--NVDREIRLLKMLQH 97
V G+ +GEG +G V + + T V + K + I E+ D+EI+++ QH
Sbjct: 34 VGGNKMGEGGFGVVYKGYVNNT----TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQD---MLDSTPYKKFPI-WQAHGYFLQ-LLD 152
N++ L+ F +D + + G L D LD TP P+ W Q +
Sbjct: 90 ENLVELLG-FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP----PLSWHMRCKIAQGAAN 144
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAP 212
G+ +LH IH+DIK N+LL T KISDFG+A + + F + G+ + AP
Sbjct: 145 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAP 204
Query: 213 EIANGLPEISGYKVDIWSSGVTL 235
E G EI+ K DI+S GV L
Sbjct: 205 EALRG--EITP-KSDIYSFGVVL 224
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRI-PNGEINVDREIRLLKMLQHRNVIGL 103
LG+G++G V E+ + L + K+LQ P+ + + REI++LK L ++
Sbjct: 15 LGKGNFGSV-ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 104 VDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
V + ++ L+MEY G L+D L + + Y Q+ G+EYL S+
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRRC 132
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQ-APEIANGLPEI 221
+H+D+ N+L+ + +KI+DFG+A+ L + + SP+F APE + I
Sbjct: 133 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSD--NI 190
Query: 222 SGYKVDIWSSGVTL 235
+ D+WS GV L
Sbjct: 191 FSRQSDVWSFGVVL 204
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 41/241 (17%)
Query: 23 QVIYDNKTIKVK--MIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIF---------- 70
+IY NK +K K I Y + L +G + K+ LC + K +
Sbjct: 15 NLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKI-------ILCEKDNKFYALKKYEKSLL 67
Query: 71 -KKKKLQRIPNGEINVD-------REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEY- 121
KK+ + N +I++ E++++ +++ + + N ++Y+I EY
Sbjct: 68 EKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN--YDEVYIIYEYM 125
Query: 122 ---CVGGLQD---MLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ-GIIHKDIKPGNLLL 174
+ + +LD PI +L+ Y+H++ I H+D+KP N+L+
Sbjct: 126 ENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM 185
Query: 175 TLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVT 234
+G +K+SDFG +E ++ D I S+G+ F PE + +G KVDIWS G+
Sbjct: 186 DKNGRVKLSDFGESE----YMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGIC 241
Query: 235 L 235
L
Sbjct: 242 L 242
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRL-LKMLQHR 98
V +LG G GKV ++ + +R + F K LQ P RE+ L + Q
Sbjct: 19 VTSQVLGLGINGKVLQIFN-----KRTQEKFALKMLQDCPKAR----REVELHWRASQCP 69
Query: 99 NVIGLVDVFVN--DKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQAHGYFLQLL 151
+++ +VDV+ N ++ + ++ME GG +QD D + F +A +
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIG 125
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLT---LDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
+ ++YLHS I H+D+KP NLL T + LK++DFG A+ +++T +P
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---SHNSLTEPCYTPY 182
Query: 209 FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE+ PE D+WS GV +
Sbjct: 183 YVAPEVLG--PEKYDKSCDMWSLGVIM 207
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 47/224 (20%)
Query: 43 DLLGEGSYGKV---KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
+L+G G +G+V K +D +T R VK +K +RE++ L L H N
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEK-----------AEREVKALAKLDHVN 66
Query: 100 VI---GLVDVFVND------------------------KKQKMYLIMEYC-VGGLQDMLD 131
++ G D F D K + +++ ME+C G L+ ++
Sbjct: 67 IVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 126
Query: 132 STPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL 191
+K A F Q+ G++Y+HS+ +IH+D+KP N+ L +KI DFG+ SL
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 192 DMFLHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+D T S+G+ + +PE + + G +VD+++ G+ L
Sbjct: 187 K---NDGKRTRSKGTLRYMSPEQISS--QDYGKEVDLYALGLIL 225
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 24/198 (12%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQ-HRNVIGL 103
LGEGS+ ++ + ++ AVKI K+ E N +EI LK+ + H N++ L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRM-------EANTQKEITALKLCEGHPNIVKL 71
Query: 104 VDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDGLEYLHSQGI 162
+VF + + +L+ME GG ++ + KK F +A +L+ + ++H G+
Sbjct: 72 HEVFHD--QLHTFLVMELLNGG--ELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGV 127
Query: 163 IHKDIKPGNLLLTLDG---TLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLP 219
+H+D+KP NLL T + +KI DFG A + + T + + APE+ N
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP--DNQPLKTPCFTLHYAAPELLNQ-- 183
Query: 220 EISGY--KVDIWSSGVTL 235
+GY D+WS GV L
Sbjct: 184 --NGYDESCDLWSLGVIL 199
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+ V+G LGEG++G+V E + + + AVK+ K ++ + I+ E+
Sbjct: 22 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS---EME 78
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDS--TPYKKFPIWQAH-- 144
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P ++ +H
Sbjct: 79 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 136
Query: 145 ----------GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
Q+ G+EYL S+ IH+D+ N+L+T D +KI+DFG+A +
Sbjct: 137 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 196
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE I ++ D+WS GV L
Sbjct: 197 DYYKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLL 235
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI--NVDREIRLLKMLQH 97
V G+ +GEG +G V + + T V + K + I E+ D+EI+++ QH
Sbjct: 34 VGGNKMGEGGFGVVYKGYVNNT----TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQD---MLDSTPYKKFPI-WQAHGYFLQ-LLD 152
N++ L+ F +D + + G L D LD TP P+ W Q +
Sbjct: 90 ENLVELLG-FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP----PLSWHMRCKIAQGAAN 144
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAP 212
G+ +LH IH+DIK N+LL T KISDFG+A + + F G+ + AP
Sbjct: 145 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAP 204
Query: 213 EIANGLPEISGYKVDIWSSGVTL 235
E G EI+ K DI+S GV L
Sbjct: 205 EALRG--EITP-KSDIYSFGVVL 224
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 25/208 (12%)
Query: 43 DLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEIN--VDREIRLLKMLQ-HRN 99
D+LGEG++ +V+ ++ T AVKI +K+ G I V RE+ +L Q HRN
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQP------GHIRSRVFREVEMLYQCQGHRN 72
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDGLEYLH 158
V L + +++ + YL+ E GG +L ++ F +A + L++LH
Sbjct: 73 V--LELIEFFEEEDRFYLVFEKMRGG--SILSHIHKRRHFNELEASVVVQDVASALDFLH 128
Query: 159 SQGIIHKDIKPGNLLLTLD---GTLKISDFGVAESLDMFLHDDTITTSQ-----GSPVFQ 210
++GI H+D+KP N+L +KI DFG+ + + I+T + GS +
Sbjct: 129 NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYM 188
Query: 211 APEIANGLPE---ISGYKVDIWSSGVTL 235
APE+ E I + D+WS GV L
Sbjct: 189 APEVVEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+ V+G LGEG++G+V E + + + AVK+ K ++ + I+ E+
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS---EME 85
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDS--TPYKKFPIWQAH-- 144
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P ++ +H
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 143
Query: 145 ----------GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
Q+ G+EYL S+ IH+D+ N+L+T D +KI+DFG+A +
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE I ++ D+WS GV L
Sbjct: 204 DYYKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLL 242
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+ V+G LGEG++G+V E + + + AVK+ K ++ + I+ E+
Sbjct: 21 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS---EME 77
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDS--TPYKKFPIWQAH-- 144
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P ++ +H
Sbjct: 78 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 135
Query: 145 ----------GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
Q+ G+EYL S+ IH+D+ N+L+T D +KI+DFG+A +
Sbjct: 136 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 195
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE I ++ D+WS GV L
Sbjct: 196 DYYKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLL 234
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 30/202 (14%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH-RNVIGL 103
LG G + V++ + T A K KK++ R + + EI +L++ + VI L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRR--RGQDCRAEILHEIAVLELAKSCPRVINL 94
Query: 104 VDVFVNDKKQKMYLIMEYCVGG---------LQDMLDSTPYKKFPIWQAHGYFLQLLDGL 154
+V+ N ++ LI+EY GG L +M+ + Q+L+G+
Sbjct: 95 HEVYEN--TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRL--------IKQILEGV 144
Query: 155 EYLHSQGIIHKDIKPGNLLLTLD---GTLKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
YLH I+H D+KP N+LL+ G +KI DFG++ + H + G+P + A
Sbjct: 145 YYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG---HACELREIMGTPEYLA 201
Query: 212 PEIANGLPEISGYKVDIWSSGV 233
PEI N P + D+W+ G+
Sbjct: 202 PEILNYDPITTA--TDMWNIGI 221
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI--NVDREIRLLKMLQH 97
V G+ +GEG +G V + + T V + K + I E+ D+EI+++ QH
Sbjct: 28 VGGNKMGEGGFGVVYKGYVNNT----TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 83
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQD---MLDSTPYKKFPI-WQAHGYFLQ-LLD 152
N++ L+ F +D + + G L D LD TP P+ W Q +
Sbjct: 84 ENLVELLG-FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP----PLSWHMRCKIAQGAAN 138
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAP 212
G+ +LH IH+DIK N+LL T KISDFG+A + + F G+ + AP
Sbjct: 139 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAP 198
Query: 213 EIANGLPEISGYKVDIWSSGVTL 235
E G EI+ K DI+S GV L
Sbjct: 199 EALRG--EITP-KSDIYSFGVVL 218
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+ V+G LGEG++G+V E + + + AVK+ K ++ + I+ E+
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS---EME 85
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDS--TPYKKFPIWQAH-- 144
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P ++ +H
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNP 143
Query: 145 ----------GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
Q+ G+EYL S+ IH+D+ N+L+T D +KI+DFG+A +
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE I ++ D+WS GV L
Sbjct: 204 DYYKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLL 242
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+ V+G LGEG++G+V E + + + AVK+ K ++ + I+ E+
Sbjct: 18 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS---EME 74
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDS--TPYKKFPIWQAH-- 144
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P ++ +H
Sbjct: 75 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 132
Query: 145 ----------GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
Q+ G+EYL S+ IH+D+ N+L+T D +KI+DFG+A +
Sbjct: 133 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 192
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE I ++ D+WS GV L
Sbjct: 193 DYYKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLL 231
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+ V+G LGEG++G+V E + + + AVK+ K ++ + I+ E+
Sbjct: 70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS---EME 126
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDS--TPYKKFPIWQAH-- 144
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P ++ +H
Sbjct: 127 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 184
Query: 145 ----------GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
Q+ G+EYL S+ IH+D+ N+L+T D +KI+DFG+A +
Sbjct: 185 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 244
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE I ++ D+WS GV L
Sbjct: 245 DYYKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLL 283
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 18/199 (9%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
KY++ + LG G +G V +++ + K K K ++ V +EI +L + +H
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-----GTDQVLVKKEISILNIARH 60
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAH--GYFLQLLDGLE 155
RN++ L + F + +++ +I E+ + GL D+ + F + + Y Q+ + L+
Sbjct: 61 RNILHLHESF--ESMEELVMIFEF-ISGL-DIFERINTSAFELNEREIVSYVHQVCEALQ 116
Query: 156 YLHSQGIIHKDIKPGNLLLTL--DGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE 213
+LHS I H DI+P N++ T+KI +FG A L D +P + APE
Sbjct: 117 FLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP---GDNFRLLFTAPEYYAPE 173
Query: 214 IANGLPEISGYKVDIWSSG 232
+ ++ D+WS G
Sbjct: 174 VHQH--DVVSTATDMWSLG 190
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+ V+G LGEG++G+V E + + + AVK+ K ++ + I+ E+
Sbjct: 14 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS---EME 70
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDS--TPYKKFPIWQAH-- 144
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P ++ +H
Sbjct: 71 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 128
Query: 145 ----------GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
Q+ G+EYL S+ IH+D+ N+L+T D +KI+DFG+A +
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 188
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE I ++ D+WS GV L
Sbjct: 189 DYYKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLL 227
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+ V+G LGEG++G+V E + + + AVK+ K ++ + I+ E+
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS---EME 85
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDS--TPYKKFPIWQAH-- 144
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P ++ +H
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 143
Query: 145 ----------GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
Q+ G+EYL S+ IH+D+ N+L+T D +KI+DFG+A +
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE I ++ D+WS GV L
Sbjct: 204 DYYKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLL 242
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 3 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 61
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E + +QD+ D T A
Sbjct: 62 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-MEPVQDLFDFITERGALQEELARS 118
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 119 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 174
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 175 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 204
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI--NVDREIRLLKMLQH 97
V G+ GEG +G V + + T V + K + I E+ D+EI++ QH
Sbjct: 25 VGGNKXGEGGFGVVYKGYVNNT----TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQH 80
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQD---MLDSTPYKKFPI-WQAHGYFLQ-LLD 152
N++ L+ F +D + + G L D LD TP P+ W Q +
Sbjct: 81 ENLVELLG-FSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP----PLSWHXRCKIAQGAAN 135
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAP 212
G+ +LH IH+DIK N+LL T KISDFG+A + + F + G+ + AP
Sbjct: 136 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAP 195
Query: 213 EIANGLPEISGYKVDIWSSGVTL 235
E G EI+ K DI+S GV L
Sbjct: 196 EALRG--EITP-KSDIYSFGVVL 215
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 34/211 (16%)
Query: 43 DLLGEGSYGKV---KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
+L+G G +G+V K +D +T ++R+ +RE++ L L H N
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYV-----------IKRVKYNNEKAEREVKALAKLDHVN 65
Query: 100 VI---GLVDVFVND-----------KKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAH 144
++ G D F D K + +++ ME+C G L+ ++ +K A
Sbjct: 66 IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLAL 125
Query: 145 GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ 204
F Q+ G++Y+HS+ +I++D+KP N+ L +KI DFG+ SL +D S+
Sbjct: 126 ELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK---NDGKRXRSK 182
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ + +PE + + G +VD+++ G+ L
Sbjct: 183 GTLRYMSPEQISS--QDYGKEVDLYALGLIL 211
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 45 LGEGSYGKVKEMLDSE----TLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNV 100
LG GSYG+V ++ E +R++ F+ K + E+ K+ QH
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHE-----KVGQHPCC 119
Query: 101 IGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
+ L + ++ +YL E C LQ ++ P Q GY L L +LHSQ
Sbjct: 120 VRLEQAW--EEGGILYLQTELCGPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQ 176
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPE 220
G++H D+KP N+ L G K+ DFG+ L +G P + APE+ G
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT---AGAGEVQEGDPRYMAPELLQG--- 230
Query: 221 ISGYKVDIWSSGVTL 235
G D++S G+T+
Sbjct: 231 SYGTAADVFSLGLTI 245
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 18/222 (8%)
Query: 23 QVIYDNKTIKVK--MIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---R 77
+V++ +K K + +Y +G LLG G +G V + A+K +K ++
Sbjct: 15 EVLFQGPHMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 74
Query: 78 IPNGEINVDREIRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TP 134
+PNG V E+ LLK + VI L+D F ++ LI+E +QD+ D T
Sbjct: 75 LPNG-TRVPMEVVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITE 130
Query: 135 YKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDM 193
A +F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG
Sbjct: 131 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----A 186
Query: 194 FLHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
L D T G+ V+ PE G +WS G+ L
Sbjct: 187 LLKDTVYTDFDGTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 227
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 62
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 119
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 175
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 176 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 205
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 37 GKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDREIRLLK 93
+Y +G LLG G +G V + A+K +K ++ +PNG V E+ LLK
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLK 62
Query: 94 MLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQL 150
+ VI L+D F ++ LI+E +QD+ D T A +F Q+
Sbjct: 63 KVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQV 119
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T G+ V+
Sbjct: 120 LEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFDGTRVY 175
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
PE G +WS G+ L
Sbjct: 176 SPPEWIR-YHRYHGRSAAVWSLGILL 200
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 2 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 60
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 61 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 117
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 118 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 173
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 174 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 203
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 18/159 (11%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGY 146
E+ LL+ L+H N++ D ++ +Y++MEYC GG L ++ T K + +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEF 112
Query: 147 FL----QLLDGLEYLHSQG-----IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
L QL L+ H + ++H+D+KP N+ L +K+ DFG+A L+ HD
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN---HD 169
Query: 198 DTIT-TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T G+P + +PE N + K DIWS G L
Sbjct: 170 TSFAKTFVGTPYYMSPEQMNRMS--YNEKSDIWSLGCLL 206
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 3 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 61
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 62 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 118
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 119 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 174
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 175 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 204
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 19 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 77
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 134
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 190
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 191 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 220
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR---EIRLLKMLQHRNVI 101
LG G +G+V M + AVK K G ++V+ E ++K LQH ++
Sbjct: 196 LGAGQFGEVW-MATYNKHTKVAVKTMKP--------GSMSVEAFLAEANVMKTLQHDKLV 246
Query: 102 GLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
L V K+ +Y+I E+ G L D L S K P+ + + Q+ +G+ ++ +
Sbjct: 247 KLHAVVT---KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 303
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIAN- 216
IH+D++ N+L++ KI+DFG+A ++ D+ T +G+ P+ + APE N
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLARVIE----DNEYTAREGAKFPIKWTAPEAINF 359
Query: 217 GLPEISGYKVDIWSSGVTL 235
G I K D+WS G+ L
Sbjct: 360 GSFTI---KSDVWSFGILL 375
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 62
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 119
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 175
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 176 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 205
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 62
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 119
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 175
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 176 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 205
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 19 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 77
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 134
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 190
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 191 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 220
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 18 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 76
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 77 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 133
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 134 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 189
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 190 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 219
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 96
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 97 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 153
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 154 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 209
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 210 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 239
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 18 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 76
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 77 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 133
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 134 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 189
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 190 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 219
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 31 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 89
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 146
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 202
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 203 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 232
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 32 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 90
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 147
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 203
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 204 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 233
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 31 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 89
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 146
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 202
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 203 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 232
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 27/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR---EIRLLKMLQHRNVI 101
LG G +G+V M + AVK K G ++V+ E ++K LQH ++
Sbjct: 23 LGAGQFGEVW-MATYNKHTKVAVKTMKP--------GSMSVEAFLAEANVMKTLQHDKLV 73
Query: 102 GLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
L V K+ +Y+I E+ G L D L S K P+ + + Q+ +G+ ++ +
Sbjct: 74 KLHAVVT---KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 130
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIAN- 216
IH+D++ N+L++ KI+DFG+A ++ D+ T +G+ P+ + APE N
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFGLARVIE----DNEYTAREGAKFPIKWTAPEAINF 186
Query: 217 GLPEISGYKVDIWSSGVTL 235
G I K D+WS G+ L
Sbjct: 187 GSFTI---KSDVWSFGILL 202
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 32 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 90
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 147
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 203
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 204 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 233
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 46 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 104
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 105 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 161
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 162 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 217
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 218 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 247
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 19 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 77
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 134
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 190
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 191 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 220
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 32 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 90
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 147
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 203
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 204 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 233
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 31 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 89
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 146
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 202
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 203 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 232
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 32 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 90
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 147
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 203
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 204 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 233
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
K +G LGEG++G+V E + + AVK+ K ++ + ++ E+
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS---EME 92
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDML--------------DSTP 134
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 135 YKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
++ QL G+EYL SQ IH+D+ N+L+T + +KI+DFG+A ++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE + ++ D+WS GV +
Sbjct: 211 DYYKNTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLM 249
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDREIRLLKM 94
+Y +G LLG G +G V + A+K +K ++ +PNG V E+ LLK
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKK 63
Query: 95 LQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLL 151
+ VI L+D F ++ LI+E +QD+ D T A +F Q+L
Sbjct: 64 VSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVFQ 210
+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T G+ V+
Sbjct: 121 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFDGTRVYS 176
Query: 211 APEIANGLPEISGYKVDIWSSGVTL 235
PE G +WS G+ L
Sbjct: 177 PPEWIR-YHRYHGRSAAVWSLGILL 200
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 31 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 89
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 146
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 202
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 203 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 232
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 46 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 104
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 105 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 161
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 162 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 217
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 218 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 247
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 32 KVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDRE 88
K + +Y +G LLG G +G V + A+K +K ++ +PNG V E
Sbjct: 51 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPME 109
Query: 89 IRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHG 145
+ LLK + VI L+D F ++ LI+E +QD+ D T A
Sbjct: 110 VVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARS 166
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQ 204
+F Q+L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T
Sbjct: 167 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFD 222
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ V+ PE G +WS G+ L
Sbjct: 223 GTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 252
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 37 GKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQ---RIPNGEINVDREIRLLK 93
+Y +G LLG G +G V + A+K +K ++ +PNG V E+ LLK
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLK 62
Query: 94 MLQH--RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDS-TPYKKFPIWQAHGYFLQL 150
+ VI L+D F ++ LI+E +QD+ D T A +F Q+
Sbjct: 63 KVSSGFSGVIRLLDWF--ERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQV 119
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
L+ + + H+ G++H+DIK N+L+ L+ G LK+ DFG L D T G+ V+
Sbjct: 120 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFDGTRVY 175
Query: 210 QAPEIANGLPEISGYKVDIWSSGVTL 235
PE G +WS G+ L
Sbjct: 176 SPPEWIR-YHRYHGRSAAVWSLGILL 200
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 11/194 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIG 102
LLG+G++GKV + + T A+KI KK+ + + E+ + E R+L+ +H +
Sbjct: 158 LLGKGTFGKVILVKEKATGRYYAMKILKKEVI--VAKDEVAHTLTENRVLQNSRHPFLTA 215
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ-G 161
L F ++ +MEY GG + + + F +A Y +++ L+YLHS+
Sbjct: 216 LKYSF--QTHDRLCFVMEYANGG-ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN 272
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++++D+K NL+L DG +KI+DFG+ + + T+ T G+P + APE+
Sbjct: 273 VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLED--ND 328
Query: 222 SGYKVDIWSSGVTL 235
G VD W GV +
Sbjct: 329 YGRAVDWWGLGVVM 342
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKK---KLQRIPNGEINVDREIR-LLKMLQHRN 99
++G G++G+V + + A K+F K K + + E RE R +L +
Sbjct: 81 VIGRGAFGEV-----AVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHS 159
+ L F +D +YL+M+Y VGG L S + P A Y +++ ++ +H
Sbjct: 136 ITTLHYAFQDD--NNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 160 QGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTS--QGSPVFQAPEIANG 217
+H+DIKP N+L+ ++G ++++DFG L + D T+ +S G+P + +PEI
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKL---MEDGTVQSSVAVGTPDYISPEILQA 250
Query: 218 LPEISGY---KVDIWSSGVTL 235
+ G + D WS GV +
Sbjct: 251 MEGGKGRYGPECDWWSLGVCM 271
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 11/194 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIG 102
LLG+G++GKV + + T A+KI KK+ + + E+ + E R+L+ +H +
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKILKKEVI--VAKDEVAHTLTENRVLQNSRHPFLTA 212
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ-G 161
L F ++ +MEY GG + + + F +A Y +++ L+YLHS+
Sbjct: 213 LKYSF--QTHDRLCFVMEYANGG-ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN 269
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++++D+K NL+L DG +KI+DFG+ + + T+ T G+P + APE+
Sbjct: 270 VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLED--ND 325
Query: 222 SGYKVDIWSSGVTL 235
G VD W GV +
Sbjct: 326 YGRAVDWWGLGVVM 339
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
++G G++ +V + +T A+KI K + + GE++ RE R + + R I
Sbjct: 68 VIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDM--LKRGEVSCFREERDVLVNGDRRWITQ 125
Query: 104 VDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
+ D+ +YL+MEY VGG L S ++ P A Y +++ ++ +H G +
Sbjct: 126 LHFAFQDENY-LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYV 184
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT--SQGSPVFQAPEIANGLPEI 221
H+DIKP N+LL G ++++DFG L D T+ + + G+P + +PEI +
Sbjct: 185 HRDIKPDNILLDRCGHIRLADFGSCLKLRA---DGTVRSLVAVGTPDYLSPEILQAVGGG 241
Query: 222 SGY-----KVDIWSSGV 233
G + D W+ GV
Sbjct: 242 PGTGSYGPECDWWALGV 258
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 18/159 (11%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGY 146
E+ LL+ L+H N++ D ++ +Y++MEYC GG L ++ T K + +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEF 112
Query: 147 FL----QLLDGLEYLHSQG-----IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
L QL L+ H + ++H+D+KP N+ L +K+ DFG+A L+ HD
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN---HD 169
Query: 198 DTITTS-QGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ + G+P + +PE N + K DIWS G L
Sbjct: 170 TSFAKAFVGTPYYMSPEQMNRMS--YNEKSDIWSLGCLL 206
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 17/214 (7%)
Query: 30 TIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREI 89
T + +Y +G++LG G +V D AVK+ + L R P+ + RE
Sbjct: 22 TTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD-LARDPSFYLRFRREA 80
Query: 90 RLLKMLQHRNVIGLVDVFVNDKKQKM--YLIMEYCVG-GLQDMLDS----TPYKKFPIWQ 142
+ L H ++ + D + Y++MEY G L+D++ + TP + +
Sbjct: 81 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-- 138
Query: 143 AHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
L + H GIIH+D+KP N++++ +K+ DFG+A ++ + T T
Sbjct: 139 ----IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 194
Query: 203 SQ-GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ G+ + +PE A G + + D++S G L
Sbjct: 195 AVIGTAQYLSPEQARG--DSVDARSDVYSLGCVL 226
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 17/214 (7%)
Query: 30 TIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREI 89
T + +Y +G++LG G +V D AVK+ + L R P+ + RE
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD-LARDPSFYLRFRREA 63
Query: 90 RLLKMLQHRNVIGLVDVFVNDKKQKM--YLIMEYCVG-GLQDMLDS----TPYKKFPIWQ 142
+ L H ++ + D + Y++MEY G L+D++ + TP + +
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-- 121
Query: 143 AHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
L + H GIIH+D+KP N++++ +K+ DFG+A ++ + T T
Sbjct: 122 ----IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 203 SQ-GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ G+ + +PE A G + + D++S G L
Sbjct: 178 AVIGTAQYLSPEQARG--DSVDARSDVYSLGCVL 209
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 18/202 (8%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
I + +G LG+G +G V + ++ A+K+ K ++++ E + REI + L
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEK-EGVEHQLRREIEIQAHL 80
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGYFLQLLDG 153
H N++ L + F + ++++YLI+EY G +++ S + + + +L D
Sbjct: 81 HHPNILRLYNYFYD--RRRIYLILEYAPRGELYKELQKSCTFDE---QRTATIMEELADA 135
Query: 154 LEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT--TSQGSPVFQA 211
L Y H + +IH+DIKP NLLL L G LKI+DFG + +H ++ T G+ +
Sbjct: 136 LMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS------VHAPSLRRKTMCGTLDYLP 189
Query: 212 PEIANGLPEISGYKVDIWSSGV 233
PE+ G + KVD+W GV
Sbjct: 190 PEMIEG--RMHNEKVDLWCIGV 209
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 17/214 (7%)
Query: 30 TIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREI 89
T + +Y +G++LG G +V D AVK+ + L R P+ + RE
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD-LARDPSFYLRFRREA 63
Query: 90 RLLKMLQHRNVIGLVDVFVNDKKQKM--YLIMEYCVG-GLQDMLDS----TPYKKFPIWQ 142
+ L H ++ + D + Y++MEY G L+D++ + TP + +
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-- 121
Query: 143 AHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
L + H GIIH+D+KP N++++ +K+ DFG+A ++ + T T
Sbjct: 122 ----IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 203 SQ-GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ G+ + +PE A G + + D++S G L
Sbjct: 178 AVIGTAQYLSPEQARG--DSVDARSDVYSLGCVL 209
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 25/208 (12%)
Query: 43 DLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEIN--VDREIRLLKMLQ-HRN 99
D+LGEG++ +V+ ++ T AVKI +K+ G I V RE+ +L Q HRN
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQP------GHIRSRVFREVEMLYQCQGHRN 72
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKK-FPIWQAHGYFLQLLDGLEYLH 158
V L + +++ + YL+ E GG +L ++ F +A + L++LH
Sbjct: 73 V--LELIEFFEEEDRFYLVFEKMRGG--SILSHIHKRRHFNELEASVVVQDVASALDFLH 128
Query: 159 SQGIIHKDIKPGNLLLTLD---GTLKISDFGVAESLDMFLHDDTITTSQ-----GSPVFQ 210
++GI H+D+KP N+L +KI DF + + + I+T + GS +
Sbjct: 129 NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYM 188
Query: 211 APEIANGLPE---ISGYKVDIWSSGVTL 235
APE+ E I + D+WS GV L
Sbjct: 189 APEVVEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 17/214 (7%)
Query: 30 TIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREI 89
T + +Y +G++LG G +V D AVK+ + L R P+ + RE
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD-LARDPSFYLRFRREA 63
Query: 90 RLLKMLQHRNVIGLVDVFVNDKKQKM--YLIMEYCVG-GLQDMLDS----TPYKKFPIWQ 142
+ L H ++ + D + Y++MEY G L+D++ + TP + +
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-- 121
Query: 143 AHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
L + H GIIH+D+KP N++++ +K+ DFG+A ++ + T T
Sbjct: 122 ----IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 203 SQ-GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ G+ + +PE A G + + D++S G L
Sbjct: 178 AVIGTAQYLSPEQARG--DSVDARSDVYSLGCVL 209
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
K +G LGEG++G+V E + + AVK+ K ++ + ++ E+
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS---EME 92
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDML--------------DSTP 134
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEXSYDINRVP 150
Query: 135 YKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
++ QL G+EYL SQ IH+D+ N+L+T + +KI+DFG+A ++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
T + + APE + ++ D+WS GV +
Sbjct: 211 DXXKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLM 249
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
K +G LGEG++G+V E + + AVK+ K ++ + ++ E+
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS---EME 92
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDML--------------DSTP 134
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 135 YKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
++ QL G+EYL SQ IH+D+ N+L+T + +KI+DFG+A ++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
T + + APE + ++ D+WS GV +
Sbjct: 211 DXXKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLM 249
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
K +G LGEG++G+V E + + AVK+ K ++ + ++ E+
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS---EME 92
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDML--------------DSTP 134
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P
Sbjct: 93 MMKMIGKHKNIITLLGACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 135 YKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
++ QL G+EYL SQ IH+D+ N+L+T + +KI+DFG+A ++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE + ++ D+WS GV +
Sbjct: 211 DYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLM 249
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
K +G LGEG +G+V E + + AVK+ K ++ + ++ E+
Sbjct: 28 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS---EME 84
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDML--------------DSTP 134
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P
Sbjct: 85 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 142
Query: 135 YKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
++ QL G+EYL SQ IH+D+ N+L+T + +KI+DFG+A ++
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 202
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE + ++ D+WS GV +
Sbjct: 203 DYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLM 241
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGY 146
E+ LL+ L+H N++ D ++ +Y++MEYC GG L ++ T K + +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEF 112
Query: 147 FL----QLLDGLEYLHSQG-----IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
L QL L+ H + ++H+D+KP N+ L +K+ DFG+A L+ HD
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN---HD 169
Query: 198 DTITTS-QGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ G+P + +PE N + K DIWS G L
Sbjct: 170 EDFAKEFVGTPYYMSPEQMNRMS--YNEKSDIWSLGCLL 206
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
K +G LGEG++G+V E + + AVK+ K ++ + ++ E+
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS---EME 92
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDML--------------DSTP 134
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 135 YKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
++ QL G+EYL SQ IH+D+ N+L+T + ++I+DFG+A ++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNI 210
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE + ++ D+WS GV +
Sbjct: 211 DYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLM 249
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
K +G LGEG +G+V E + + AVK+ K ++ + ++ E+
Sbjct: 25 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS---EME 81
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDML--------------DSTP 134
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P
Sbjct: 82 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 139
Query: 135 YKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
++ QL G+EYL SQ IH+D+ N+L+T + +KI+DFG+A ++
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 199
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE + ++ D+WS GV +
Sbjct: 200 DYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLM 238
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
K +G LGEG++G+V E + + AVK+ K + + ++ E+
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVS---EME 92
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDML--------------DSTP 134
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 135 YKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
++ QL G+EYL SQ IH+D+ N+L+T + +KI+DFG+A ++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE + ++ D+WS GV +
Sbjct: 211 DYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLM 249
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
K +G LGEG +G+V E + + AVK+ K ++ + ++ E+
Sbjct: 23 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS---EME 79
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDML--------------DSTP 134
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P
Sbjct: 80 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 137
Query: 135 YKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
++ QL G+EYL SQ IH+D+ N+L+T + +KI+DFG+A ++
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNI 197
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE + ++ D+WS GV +
Sbjct: 198 DYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLM 236
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
K +G LGEG++G+V E + + AVK+ K ++ + ++ E+
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS---EME 92
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDML--------------DSTP 134
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P
Sbjct: 93 MMKMIGKHKNIIHLLGACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 135 YKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
++ QL G+EYL SQ IH+D+ N+L+T + +KI+DFG+A ++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE + ++ D+WS GV +
Sbjct: 211 DYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLM 249
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
K +G LGEG +G+V E + + AVK+ K ++ + ++ E+
Sbjct: 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS---EME 138
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDML--------------DSTP 134
++KM+ +H+N+I L+ D +Y+I+EY G L++ L + P
Sbjct: 139 MMKMIGKHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 135 YKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
++ QL G+EYL SQ IH+D+ N+L+T + +KI+DFG+A ++
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 256
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE + ++ D+WS GV +
Sbjct: 257 DYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLM 295
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 59/99 (59%), Gaps = 12/99 (12%)
Query: 147 FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ-- 204
F+Q+ + +E+LHS+G++H+D+KP N+ T+D +K+ DFG+ ++D + T+ T
Sbjct: 170 FIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229
Query: 205 --------GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+ ++ +PE +G +KVDI+S G+ L
Sbjct: 230 YATHXGQVGTKLYMSPEQIHG--NNYSHKVDIFSLGLIL 266
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 44 LLGEGSYGKVK--EMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
++G G++G+V +M ++E + A+KI K ++ + E RE R + + I
Sbjct: 81 VIGRGAFGEVAVVKMKNTERI--YAMKILNKWEM--LKRAETACFREERDVLVNGDCQWI 136
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
+ D+ +YL+M+Y VGG L S K P A Y +++ ++ +H
Sbjct: 137 TALHYAFQDENH-LYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 195
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTS--QGSPVFQAPEIANGLP 219
+H+DIKP N+LL ++G ++++DFG ++ D T+ +S G+P + +PEI +
Sbjct: 196 YVHRDIKPDNVLLDVNGHIRLADFGSCLKMN---DDGTVQSSVAVGTPDYISPEILQAME 252
Query: 220 E---ISGYKVDIWSSGVTL 235
+ G + D WS GV +
Sbjct: 253 DGMGKYGPECDWWSLGVCM 271
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 19/194 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH-RNVIGL 103
LG G Y +V E ++ + VKI K K +I REI++L+ L+ N+I L
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKNKI-------KREIKILENLRGGPNIITL 97
Query: 104 VDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
D+ + + L+ E+ L Y+ + Y ++L L+Y HS GI+
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCHSMGIM 153
Query: 164 HKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIANGLPEI 221
H+D+KP N+++ + L++ D+G+AE F H S F+ PE+ ++
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAE----FYHPGQEYNVRVASRYFKGPELLVDY-QM 208
Query: 222 SGYKVDIWSSGVTL 235
Y +D+WS G L
Sbjct: 209 YDYSLDMWSLGCML 222
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 11/197 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
++G G++G+V + T A+KI K ++ + E RE R + + I
Sbjct: 97 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEM--LKRAETACFREERDVLVNGDCQWITA 154
Query: 104 VDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
+ D+ +YL+M+Y VGG L S K P A Y +++ ++ +H +
Sbjct: 155 LHYAFQDENH-LYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYV 213
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTS--QGSPVFQAPEIANGLPE- 220
H+DIKP N+LL ++G ++++DFG ++ D T+ +S G+P + +PEI + +
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFGSCLKMN---DDGTVQSSVAVGTPDYISPEILQAMEDG 270
Query: 221 --ISGYKVDIWSSGVTL 235
G + D WS GV +
Sbjct: 271 MGKYGPECDWWSLGVCM 287
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 30 TIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREI 89
T + +Y +G++LG G +V D AVK+ + L R P+ + RE
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD-LARDPSFYLRFRREA 63
Query: 90 RLLKMLQHRNVIGLVDVFVNDKKQKM--YLIMEYCVG-GLQDMLDS----TPYKKFPIWQ 142
+ L H ++ + D + Y++MEY G L+D++ + TP + +
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-- 121
Query: 143 AHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
L + H GIIH+D+KP N+L++ +K+ DFG+A ++ + T
Sbjct: 122 ----IADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTA 177
Query: 203 SQ-GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ G+ + +PE A G + + D++S G L
Sbjct: 178 AVIGTAQYLSPEQARG--DSVDARSDVYSLGCVL 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 11/194 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIG 102
LLG+G++GKV + + T A+KI KK+ + + E+ + E R+L+ +H +
Sbjct: 16 LLGKGTFGKVILVKEKATGRYYAMKILKKEVI--VAKDEVAHTLTENRVLQNSRHPFLTA 73
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ-G 161
L F ++ +MEY GG + + + F +A Y +++ L+YLHS+
Sbjct: 74 LKYSF--QTHDRLCFVMEYANGG-ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN 130
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++++D+K NL+L DG +KI+DFG+ + + T+ G+P + APE+
Sbjct: 131 VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLED--ND 186
Query: 222 SGYKVDIWSSGVTL 235
G VD W GV +
Sbjct: 187 YGRAVDWWGLGVVM 200
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 11/194 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIG 102
LLG+G++GKV + + T A+KI KK+ + + E+ + E R+L+ +H +
Sbjct: 17 LLGKGTFGKVILVKEKATGRYYAMKILKKEVI--VAKDEVAHTLTENRVLQNSRHPFLTA 74
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ-G 161
L F ++ +MEY GG + + + F +A Y +++ L+YLHS+
Sbjct: 75 LKYSF--QTHDRLCFVMEYANGG-ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN 131
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++++D+K NL+L DG +KI+DFG+ + + T+ G+P + APE+
Sbjct: 132 VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLED--ND 187
Query: 222 SGYKVDIWSSGVTL 235
G VD W GV +
Sbjct: 188 YGRAVDWWGLGVVM 201
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 11/194 (5%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEI-NVDREIRLLKMLQHRNVIG 102
LLG+G++GKV + + T A+KI KK+ + + E+ + E R+L+ +H +
Sbjct: 15 LLGKGTFGKVILVKEKATGRYYAMKILKKEVI--VAKDEVAHTLTENRVLQNSRHPFLTA 72
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ-G 161
L F ++ +MEY GG + + + F +A Y +++ L+YLHS+
Sbjct: 73 LKYSF--QTHDRLCFVMEYANGG-ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN 129
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
++++D+K NL+L DG +KI+DFG+ + + T+ G+P + APE+
Sbjct: 130 VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLED--ND 185
Query: 222 SGYKVDIWSSGVTL 235
G VD W GV +
Sbjct: 186 YGRAVDWWGLGVVM 199
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 26/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVD---REIRLLKMLQHRNVI 101
LG G +G+V M + AVK K G ++V E L+K LQH ++
Sbjct: 21 LGAGQFGEVW-MGYYNNSTKVAVKTLKP--------GTMSVQAFLEEANLMKTLQHDKLV 71
Query: 102 GLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
L V +++ +Y+I EY G L D L S K + + + Q+ +G+ Y+ +
Sbjct: 72 RLYAVVT--REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 129
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIAN- 216
IH+D++ N+L++ KI+DFG+A ++ D+ T +G+ P+ + APE N
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLARVIE----DNEYTAREGAKFPIKWTAPEAINF 185
Query: 217 GLPEISGYKVDIWSSGVTL 235
G I K D+WS G+ L
Sbjct: 186 GCFTI---KSDVWSFGILL 201
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 13/153 (8%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQ 142
E ++L + R ++ L F + K + L+M GG + ++ + P + P +
Sbjct: 235 EKKILAKVHSRFIVSLAYAF--ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP--R 290
Query: 143 AHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
A Y Q++ GLE+LH + II++D+KP N+LL DG ++ISD G+A +++
Sbjct: 291 AIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKG 348
Query: 203 SQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P F APE+ G E + VD ++ GVTL
Sbjct: 349 YAGTPGFMAPELLLG--EEYDFSVDYFALGVTL 379
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 13/153 (8%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQ 142
E ++L + R ++ L F + K + L+M GG + ++ + P + P +
Sbjct: 235 EKKILAKVHSRFIVSLAYAF--ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP--R 290
Query: 143 AHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
A Y Q++ GLE+LH + II++D+KP N+LL DG ++ISD G+A +++
Sbjct: 291 AIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKG 348
Query: 203 SQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P F APE+ G E + VD ++ GVTL
Sbjct: 349 YAGTPGFMAPELLLG--EEYDFSVDYFALGVTL 379
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 13/153 (8%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQ 142
E ++L + R ++ L F + K + L+M GG + ++ + P + P +
Sbjct: 235 EKKILAKVHSRFIVSLAYAF--ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP--R 290
Query: 143 AHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
A Y Q++ GLE+LH + II++D+KP N+LL DG ++ISD G+A +++
Sbjct: 291 AIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKG 348
Query: 203 SQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P F APE+ G E + VD ++ GVTL
Sbjct: 349 YAGTPGFMAPELLLG--EEYDFSVDYFALGVTL 379
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 13/153 (8%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQ 142
E ++L + R ++ L F + K + L+M GG + ++ + P + P +
Sbjct: 235 EKKILAKVHSRFIVSLAYAF--ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP--R 290
Query: 143 AHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
A Y Q++ GLE+LH + II++D+KP N+LL DG ++ISD G+A +++
Sbjct: 291 AIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKG 348
Query: 203 SQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
G+P F APE+ G E + VD ++ GVTL
Sbjct: 349 YAGTPGFMAPELLLG--EEYDFSVDYFALGVTL 379
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
K +G LGEG++G+V E + + AVK+ K ++ + ++ E+
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS---EME 92
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDML--------------DSTP 134
++KM+ +H+N+I L+ D +Y+I+ Y G L++ L + P
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGP--LYVIVAYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 135 YKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
++ QL G+EYL SQ IH+D+ N+L+T + +KI+DFG+A ++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE + ++ D+WS GV +
Sbjct: 211 DYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLM 249
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 30 TIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREI 89
T + +Y +G++LG G +V D AVK+ + L R P+ + RE
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD-LARDPSFYLRFRREA 63
Query: 90 RLLKMLQHRNVIGLVDVFVNDKKQKM-----YLIMEYCVG-GLQDMLDS----TPYKKFP 139
+ L H ++ V+ + + Y++MEY G L+D++ + TP +
Sbjct: 64 QNAAALNHPAIVA---VYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 120
Query: 140 IWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
+ L + H GIIH+D+KP N++++ +K+ DFG+A ++ + T
Sbjct: 121 V------IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 200 ITTSQ-GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
T + G+ + +PE A G + + D++S G L
Sbjct: 175 QTAAVIGTAQYLSPEQARG--DSVDARSDVYSLGCVL 209
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 30/221 (13%)
Query: 38 KYVMGDLLGEGSYGKV--KEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
K +G LGEG++G+V E + + AVK+ K ++ + ++ E+
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS---EME 92
Query: 91 LLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDML--------------DSTP 134
++KM+ +H+N+I L+ D +Y+I+ Y G L++ L + P
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGP--LYVIVGYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 135 YKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF 194
++ QL G+EYL SQ IH+D+ N+L+T + +KI+DFG+A ++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T + + APE + ++ D+WS GV +
Sbjct: 211 DYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLM 249
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 23/221 (10%)
Query: 18 RVDSDQVIYDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFK-KKKLQ 76
+V D V Y + +KV +G+GS+G+V + D + A+K+ + +K+
Sbjct: 89 QVPHDHVAYRYEVLKV-----------IGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH 137
Query: 77 RIPNGEINVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYK 136
R EI + +R NVI +++ F + + + E L +++ ++
Sbjct: 138 RQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF--RNHICMTFELLSMNLYELIKKNKFQ 195
Query: 137 KFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGT--LKISDFGVAESLDMF 194
F + + +L L+ LH IIH D+KP N+LL G +K+ DFG + +
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS----CY 251
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
H T Q S ++APE+ G G +D+WS G L
Sbjct: 252 EHQRVYTXIQ-SRFYRAPEVILG--ARYGMPIDMWSLGCIL 289
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 23/221 (10%)
Query: 18 RVDSDQVIYDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFK-KKKLQ 76
+V D V Y + +KV +G+GS+G+V + D + A+K+ + +K+
Sbjct: 89 QVPHDHVAYRYEVLKV-----------IGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH 137
Query: 77 RIPNGEINVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYK 136
R EI + +R NVI +++ F + + + E L +++ ++
Sbjct: 138 RQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF--RNHICMTFELLSMNLYELIKKNKFQ 195
Query: 137 KFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGT--LKISDFGVAESLDMF 194
F + + +L L+ LH IIH D+KP N+LL G +K+ DFG + +
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS----CY 251
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
H T Q S ++APE+ G G +D+WS G L
Sbjct: 252 EHQRVYTXIQ-SRFYRAPEVILG--ARYGMPIDMWSLGCIL 289
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
V+G+ +G G++G E+ + K + P+ + +E R+LK H N
Sbjct: 117 VLGEQIGRGNFG---EVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLL----DGLE 155
++ L+ V +KQ +Y++ME GG T + + LQ++ G+E
Sbjct: 174 IVRLIGVCT--QKQPIYIVMELVQGGDFLTFLRTEGARLRV----KTLLQMVGDAAAGME 227
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS----PV-FQ 210
YL S+ IH+D+ N L+T LKISDFG++ D + + G PV +
Sbjct: 228 YLESKCCIHRDLAARNCLVTEKNVLKISDFGMSRE-----EADGVXAASGGLRQVPVKWT 282
Query: 211 APEIANGLPEISGYKVDIWSSGVTL 235
APE N S + D+WS G+ L
Sbjct: 283 APEALNYGRYSS--ESDVWSFGILL 305
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 102/197 (51%), Gaps = 10/197 (5%)
Query: 44 LLGEGSYGKV---KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNV 100
+LG G+YGKV +++ +T A+K+ KK + + + E ++L+ ++
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 101 IGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
+ + + + K++LI++Y GG + + ++F + Y +++ LE+LH
Sbjct: 121 LVTLH-YAFQTETKLHLILDYINGG-ELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL 178
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPEIANGL 218
GII++DIK N+LL +G + ++DFG+++ F+ D+T G+ + AP+I G
Sbjct: 179 GIIYRDIKLENILLDSNGHVVLTDFGLSKE---FVADETERAYDFCGTIEYMAPDIVRGG 235
Query: 219 PEISGYKVDIWSSGVTL 235
VD WS GV +
Sbjct: 236 DSGHDKAVDWWSLGVLM 252
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 37 GKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKK-LQRIP-NGEINVDREIRLLKM 94
+Y +G LLG+G +G V + A+K+ + + L P + + E+ LL
Sbjct: 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWK 90
Query: 95 LQ----HRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQ--AHGYFL 148
+ H VI L+D F + ++ L++E + QD+ D +K P+ + + +F
Sbjct: 91 VGAGGGHPGVIRLLDWF--ETQEGFMLVLERPLPA-QDLFDYI-TEKGPLGEGPSRCFFG 146
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTL-DGTLKISDFGVAESLDMFLHDDTITTSQGSP 207
Q++ +++ HS+G++H+DIK N+L+ L G K+ DFG LHD+ T G+
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSG----ALLHDEPYTDFDGTR 202
Query: 208 VFQAPEIANGLPEISGYKVDIWSSGVTL 235
V+ PE + + +WS G+ L
Sbjct: 203 VYSPPEWISRH-QYHALPATVWSLGILL 229
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 26/199 (13%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVD---REIRLLKMLQHRNVI 101
LG G +G+V M + AVK K G ++V E L+K LQH ++
Sbjct: 20 LGAGQFGEVW-MGYYNNSTKVAVKTLKP--------GTMSVQAFLEEANLMKTLQHDKLV 70
Query: 102 GLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
L V K++ +Y+I E+ G L D L S K + + + Q+ +G+ Y+ +
Sbjct: 71 RLYAVVT--KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIAN- 216
IH+D++ N+L++ KI+DFG+A ++ D+ T +G+ P+ + APE N
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLARVIE----DNEYTAREGAKFPIKWTAPEAINF 184
Query: 217 GLPEISGYKVDIWSSGVTL 235
G I K ++WS G+ L
Sbjct: 185 GCFTI---KSNVWSFGILL 200
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
V+G+ +G G++G E+ + K + P+ + +E R+LK H N
Sbjct: 117 VLGEQIGRGNFG---EVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLL----DGLE 155
++ L+ V +KQ +Y++ME GG T + + LQ++ G+E
Sbjct: 174 IVRLIGVCT--QKQPIYIVMELVQGGDFLTFLRTEGARLRV----KTLLQMVGDAAAGME 227
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS----PV-FQ 210
YL S+ IH+D+ N L+T LKISDFG++ D + + G PV +
Sbjct: 228 YLESKCCIHRDLAARNCLVTEKNVLKISDFGMSRE-----EADGVYAASGGLRQVPVKWT 282
Query: 211 APEIANGLPEISGYKVDIWSSGVTL 235
APE N S + D+WS G+ L
Sbjct: 283 APEALNYGRYSS--ESDVWSFGILL 305
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 99/220 (45%), Gaps = 35/220 (15%)
Query: 41 MGDLLGEGSYGKVKEM----LDSETLCRR-AVKIFKKKKLQ---RIPNGEINVDREIRLL 92
+G LG G++G+V E +D CR AVK+ K+ R E+ + L+
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI-----LI 87
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDS-----TPYKKFP------- 139
+ H NV+ L+ M +I+E+C G L L S PYK+ P
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDF 146
Query: 140 --IWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
+ Y Q+ G+E+L S+ IH+D+ N+LL+ +KI DFG+A D++
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDP 204
Query: 198 DTITTSQGS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
D + P+ + APE + + D+WS GV L
Sbjct: 205 DYVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLL 242
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 28 NKTIKVKMIGK-YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
N+ I VK G+ Y + +G G KV ++L+ ++ + K L+ N ++
Sbjct: 48 NECISVK--GRIYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSY 101
Query: 87 R-EIRLLKMLQHRN--VIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPI--W 141
R EI L LQ + +I L D + D Q +Y++ME G + L+S KK I W
Sbjct: 102 RNEIAYLNKLQQHSDKIIRLYDYEITD--QYIYMVME--CGNID--LNSWLKKKKSIDPW 155
Query: 142 QAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL 191
+ Y+ +L+ + +H GI+H D+KP N L+ +DG LK+ DFG+A +
Sbjct: 156 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 204
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 21/196 (10%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG G +G+V M + AVK K+ + P+ + E L+K LQH+ ++ L
Sbjct: 16 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMS--PDAFLA---EANLMKQLQHQRLVRLY 69
Query: 105 DVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y+I EY G L D L + K I + Q+ +G+ ++ + I
Sbjct: 70 AVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 126
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIAN-GLP 219
H+D++ N+L++ + KI+DFG+A + D+ T +G+ P+ + APE N G
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLAR----LIEDNEYTAREGAKFPIKWTAPEAINYGTF 182
Query: 220 EISGYKVDIWSSGVTL 235
I K D+WS G+ L
Sbjct: 183 TI---KSDVWSFGILL 195
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 96/222 (43%), Gaps = 31/222 (13%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
+ ++ + G + M + LG G +G V + +T + A+K ++ + P
Sbjct: 5 SPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQ---ELSPKNRERWCL 61
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKM------YLIMEYCVGG-----LQDMLDSTPYK 136
EI+++K L H NV+ +V D QK+ L MEYC GG L + K
Sbjct: 62 EIQIMKKLNHPNVVSAREV--PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK 119
Query: 137 KFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTL---KISDFGVAESLDM 193
+ PI + L YLH IIH+D+KP N++L KI D G A+ LD
Sbjct: 120 EGPI---RTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD- 175
Query: 194 FLHDDTITTSQGSPVFQAPEIANGLPEISGY--KVDIWSSGV 233
+ T G+ + APE+ E Y VD WS G
Sbjct: 176 --QGELCTEFVGTLQYLAPELL----EQKKYTVTVDYWSFGT 211
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 95/200 (47%), Gaps = 36/200 (18%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVK-----IFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
LG GS+G+V M D +T + AVK +F+ ++L + ++ R + L ++
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL--VACAGLSSPRIVPLYGAVREGP 137
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHS 159
V++F M L+ +G L + P + A Y Q L+GLEYLH+
Sbjct: 138 ---WVNIF-------MELLEGGSLGQLIKQMGCLPEDR-----ALYYLGQALEGLEYLHT 182
Query: 160 QGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHDDTITTS-------QGSPVFQA 211
+ I+H D+K N+LL+ DG+ + DFG A + L D + S G+ A
Sbjct: 183 RRILHGDVKADNVLLSSDGSRAALCDFGHA----LCLQPDGLGKSLLTGDYIPGTETHMA 238
Query: 212 PEIANGLPEISGYKVDIWSS 231
PE+ G P KVDIWSS
Sbjct: 239 PEVVMGKP--CDAKVDIWSS 256
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 21/196 (10%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG G +G+V M + AVK K+ + P+ + E L+K LQH+ ++ L
Sbjct: 21 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMS--PDAFLA---EANLMKQLQHQRLVRLY 74
Query: 105 DVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y+I EY G L D L + K I + Q+ +G+ ++ + I
Sbjct: 75 AVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 131
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIAN-GLP 219
H+D++ N+L++ + KI+DFG+A + D+ T +G+ P+ + APE N G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLAR----LIEDNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 220 EISGYKVDIWSSGVTL 235
I K D+WS G+ L
Sbjct: 188 TI---KSDVWSFGILL 200
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 96/222 (43%), Gaps = 31/222 (13%)
Query: 28 NKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR 87
+ ++ + G + M + LG G +G V + +T + A+K ++ + P
Sbjct: 6 SPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQ---ELSPKNRERWCL 62
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKM------YLIMEYCVGG-----LQDMLDSTPYK 136
EI+++K L H NV+ +V D QK+ L MEYC GG L + K
Sbjct: 63 EIQIMKKLNHPNVVSAREV--PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK 120
Query: 137 KFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTL---KISDFGVAESLDM 193
+ PI + L YLH IIH+D+KP N++L KI D G A+ LD
Sbjct: 121 EGPI---RTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD- 176
Query: 194 FLHDDTITTSQGSPVFQAPEIANGLPEISGY--KVDIWSSGV 233
+ T G+ + APE+ E Y VD WS G
Sbjct: 177 --QGELCTEFVGTLQYLAPELL----EQKKYTVTVDYWSFGT 212
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 21/196 (10%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG G +G+V M + AVK K+ + P+ + E L+K LQH+ ++ L
Sbjct: 22 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMS--PDAFLA---EANLMKQLQHQRLVRLY 75
Query: 105 DVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y+I EY G L D L + K I + Q+ +G+ ++ + I
Sbjct: 76 AVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 132
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIAN-GLP 219
H+D++ N+L++ + KI+DFG+A + D+ T +G+ P+ + APE N G
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLAR----LIEDNEXTAREGAKFPIKWTAPEAINYGTF 188
Query: 220 EISGYKVDIWSSGVTL 235
I K D+WS G+ L
Sbjct: 189 TI---KSDVWSFGILL 201
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 21/196 (10%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG G +G+V M + AVK K+ + P+ + E L+K LQH+ ++ L
Sbjct: 21 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMS--PDAFLA---EANLMKQLQHQRLVRLY 74
Query: 105 DVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y+I EY G L D L + K I + Q+ +G+ ++ + I
Sbjct: 75 AVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 131
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIAN-GLP 219
H+D++ N+L++ + KI+DFG+A + D+ T +G+ P+ + APE N G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLAR----LIEDNEYTAREGAKFPIKWTAPEAINYGTF 187
Query: 220 EISGYKVDIWSSGVTL 235
I K D+WS G+ L
Sbjct: 188 TI---KSDVWSFGILL 200
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 36/227 (15%)
Query: 28 NKTIKVKMIGK-YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
N+ I VK G+ Y + +G G KV ++L+ ++ + K L+ N ++
Sbjct: 1 NECISVK--GRIYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSY 54
Query: 87 R-EIRLLKMLQHRN--VIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPI--W 141
R EI L LQ + +I L D + D Q +Y++ME G + L+S KK I W
Sbjct: 55 RNEIAYLNKLQQHSDKIIRLYDYEITD--QYIYMVME--CGNID--LNSWLKKKKSIDPW 108
Query: 142 QAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
+ Y+ +L+ + +H GI+H D+KP N L+ +DG LK+ DFG+A + DT +
Sbjct: 109 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQ----MQPDTTS 163
Query: 202 TSQGSPV----FQAPEIANGLPE---------ISGYKVDIWSSGVTL 235
+ S V + PE + K D+WS G L
Sbjct: 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 210
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 38/228 (16%)
Query: 28 NKTIKVKMIGK-YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
N+ I VK G+ Y + +G G KV ++L+ ++ + K L+ N ++
Sbjct: 4 NECISVK--GRIYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSY 57
Query: 87 R-EIRLLKMLQHRN--VIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
R EI L LQ + +I L D + D Q +Y++ME L L K W+
Sbjct: 58 RNEIAYLNKLQQHSDKIIRLYDYEITD--QYIYMVMECGNIDLNSWLKKK--KSIDPWER 113
Query: 144 HGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTS 203
Y+ +L+ + +H GI+H D+KP N L+ +DG LK+ DFG+A + DT +
Sbjct: 114 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQ----MQPDTTSVV 168
Query: 204 QGSPV----FQAPEIANGLPEISGYK------------VDIWSSGVTL 235
+ S V + PE + ++S + D+WS G L
Sbjct: 169 KDSQVGTVNYMPPE---AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 213
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 15/168 (8%)
Query: 28 NKTIKVKMIGK-YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
N+ I VK G+ Y + +G G KV ++L+ ++ + K L+ N ++
Sbjct: 48 NECISVK--GRIYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSY 101
Query: 87 R-EIRLLKMLQHRN--VIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
R EI L LQ + +I L D + D Q +Y++ME L L K W+
Sbjct: 102 RNEIAYLNKLQQHSDKIIRLYDYEITD--QYIYMVMECGNIDLNSWLKKK--KSIDPWER 157
Query: 144 HGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL 191
Y+ +L+ + +H GI+H D+KP N L+ +DG LK+ DFG+A +
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 204
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 15/168 (8%)
Query: 28 NKTIKVKMIGK-YVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
N+ I VK G+ Y + +G G KV ++L+ ++ + K L+ N ++
Sbjct: 48 NECISVK--GRIYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSY 101
Query: 87 R-EIRLLKMLQHRN--VIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQA 143
R EI L LQ + +I L D + D Q +Y++ME L L K W+
Sbjct: 102 RNEIAYLNKLQQHSDKIIRLYDYEITD--QYIYMVMECGNIDLNSWLKKK--KSIDPWER 157
Query: 144 HGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL 191
Y+ +L+ + +H GI+H D+KP N L+ +DG LK+ DFG+A +
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 204
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 21/196 (10%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG G +G+V M + AVK K+ + P+ + E L+K LQH+ ++ L
Sbjct: 23 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMS--PDAFLA---EANLMKQLQHQRLVRLY 76
Query: 105 DVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y+I EY G L D L + K I + Q+ +G+ ++ + I
Sbjct: 77 AVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 133
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIAN-GLP 219
H+D++ N+L++ + KI+DFG+A + D+ T +G+ P+ + APE N G
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLAR----LIEDNEXTAREGAKFPIKWTAPEAINYGTF 189
Query: 220 EISGYKVDIWSSGVTL 235
I K D+WS G+ L
Sbjct: 190 TI---KSDVWSFGILL 202
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 43 DLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIG 102
+ LG G +G+V M + AVK K+ + P+ + E L+K LQH+ ++
Sbjct: 25 ERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMS--PDAFLA---EANLMKQLQHQRLVR 78
Query: 103 LVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L V ++ +Y+I EY G L D L + K I + Q+ +G+ ++ +
Sbjct: 79 LYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 135
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIAN-G 217
IH+D++ N+L++ + KI+DFG+A + D+ T +G+ P+ + APE N G
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEYTAREGAKFPIKWTAPEAINYG 191
Query: 218 LPEISGYKVDIWSSGVTL 235
I K D+WS G+ L
Sbjct: 192 TFTI---KSDVWSFGILL 206
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 43 DLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIG 102
+ LG G +G+V M + AVK K+ + P+ + E L+K LQH+ ++
Sbjct: 24 ERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMS--PDAFLA---EANLMKQLQHQRLVR 77
Query: 103 LVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L V ++ +Y+I EY G L D L + K I + Q+ +G+ ++ +
Sbjct: 78 LYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 134
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIAN-G 217
IH+D++ N+L++ + KI+DFG+A + D+ T +G+ P+ + APE N G
Sbjct: 135 YIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEYTAREGAKFPIKWTAPEAINYG 190
Query: 218 LPEISGYKVDIWSSGVTL 235
I K D+WS G+ L
Sbjct: 191 TFTI---KSDVWSFGILL 205
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 23/200 (11%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEIN-VDREIRLLK-----MLQH 97
+LG+GS+GKV T AVKI KK + + + E V++ + L + Q
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
+ +D ++Y +MEY GG M +F A Y ++ GL +L
Sbjct: 87 HSCFQTMD--------RLYFVMEYVNGG-DLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 137
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPEIA 215
S+GII++D+K N++L +G +KI+DFG+ + D +TT G+P + APEI
Sbjct: 138 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW----DGVTTKXFCGTPDYIAPEII 193
Query: 216 NGLPEISGYKVDIWSSGVTL 235
P G VD W+ GV L
Sbjct: 194 AYQP--YGKSVDWWAFGVLL 211
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 29/207 (14%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR-EIRLLKMLQHRN--VI 101
+G G KV ++L+ ++ + K L+ N ++ R EI L LQ + +I
Sbjct: 36 IGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 91
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L D + D Q +Y++ME L L K W+ Y+ +L+ + +H G
Sbjct: 92 RLYDYEITD--QYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHG 147
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV----FQAPEIANG 217
I+H D+KP N L+ +DG LK+ DFG+A + DT + + S V + PE
Sbjct: 148 IVHSDLKPANFLI-VDGMLKLIDFGIANQ----MQPDTTSVVKDSQVGTVNYMPPEAIKD 202
Query: 218 LPE---------ISGYKVDIWSSGVTL 235
+ K D+WS G L
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCIL 229
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 43 DLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIG 102
+ LG G +G+V M + AVK K+ + P+ + E L+K LQH+ ++
Sbjct: 19 ERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMS--PDAFLA---EANLMKQLQHQRLVR 72
Query: 103 LVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L V ++ +Y+I EY G L D L + K I + Q+ +G+ ++ +
Sbjct: 73 LYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIAN-G 217
IH+D++ N+L++ + KI+DFG+A + D+ T +G+ P+ + APE N G
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEXTAREGAKFPIKWTAPEAINYG 185
Query: 218 LPEISGYKVDIWSSGVTL 235
I K D+WS G+ L
Sbjct: 186 TFTI---KSDVWSFGILL 200
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 41 MGDLLGEGSYGKVKEM----LDSETLCRR-AVKIFKKKKLQ---RIPNGEINVDREIRLL 92
+G LG G++G+V E +D CR AVK+ K+ R E+ + L+
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI-----LI 85
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDS-----TPYKKFP------- 139
+ H NV+ L+ M +I+E+C G L L S PYK P
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 140 --IWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
+ Y Q+ G+E+L S+ IH+D+ N+LL+ +KI DFG+A D++
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDP 202
Query: 198 DTITTSQGS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
D + P+ + APE + + D+WS GV L
Sbjct: 203 DXVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLL 240
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 41 MGDLLGEGSYGKVKEM----LDSETLCRR-AVKIFKKKKLQ---RIPNGEINVDREIRLL 92
+G LG G++G+V E +D CR AVK+ K+ R E+ + L+
Sbjct: 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI-----LI 122
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDS-----TPYKKFP------- 139
+ H NV+ L+ M +I+E+C G L L S PYK P
Sbjct: 123 HIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 181
Query: 140 --IWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
+ Y Q+ G+E+L S+ IH+D+ N+LL+ +KI DFG+A D++
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDP 239
Query: 198 DTITTSQGS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
D + P+ + APE + + D+WS GV L
Sbjct: 240 DYVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLL 277
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 43 DLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIG 102
+ LG G +G+V M + AVK K+ + P+ + E L+K LQH+ ++
Sbjct: 28 ERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMS--PDAFLA---EANLMKQLQHQRLVR 81
Query: 103 LVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L V ++ +Y+I EY G L D L + K I + Q+ +G+ ++ +
Sbjct: 82 LYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 138
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIAN-G 217
IH+D++ N+L++ + KI+DFG+A + D+ T +G+ P+ + APE N G
Sbjct: 139 YIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEXTAREGAKFPIKWTAPEAINYG 194
Query: 218 LPEISGYKVDIWSSGVTL 235
I K D+WS G+ L
Sbjct: 195 TFTI---KSDVWSFGILL 209
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
+LG G GKV E T + A+K+ L P VD + +++ +
Sbjct: 17 VLGLGVNGKVLECFHRRTGQKCALKL-----LYDSPKARQEVDHH---WQASGGPHIVCI 68
Query: 104 VDVFVN--DKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
+DV+ N K+ + +IME GG L + + F +A + +++LHS
Sbjct: 69 LDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH 128
Query: 161 GIIHKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
I H+D+KP NLL T D LK++DFG A+ + + T +P + APE+
Sbjct: 129 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT----QNALQTPCYTPYYVAPEVLG- 183
Query: 218 LPEISGYKVDIWSSGVTL 235
PE D+WS GV +
Sbjct: 184 -PEKYDKSCDMWSLGVIM 200
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 43 DLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIG 102
+ LG G +G+V M + AVK K+ + P+ + E L+K LQH+ ++
Sbjct: 27 ERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMS--PDAFLA---EANLMKQLQHQRLVR 80
Query: 103 LVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L V ++ +Y+I EY G L D L + K I + Q+ +G+ ++ +
Sbjct: 81 LYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 137
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIAN-G 217
IH+D++ N+L++ + KI+DFG+A + D+ T +G+ P+ + APE N G
Sbjct: 138 YIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEXTAREGAKFPIKWTAPEAINYG 193
Query: 218 LPEISGYKVDIWSSGVTL 235
I K D+WS G+ L
Sbjct: 194 TFTI---KSDVWSFGILL 208
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 43 DLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIG 102
+ LG G +G+V M + AVK K+ + P+ + E L+K LQH+ ++
Sbjct: 25 ERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMS--PDAFLA---EANLMKQLQHQRLVR 78
Query: 103 LVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L V ++ +Y+I EY G L D L + K I + Q+ +G+ ++ +
Sbjct: 79 LYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 135
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIAN-G 217
IH+D++ N+L++ + KI+DFG+A + D+ T +G+ P+ + APE N G
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEXTAREGAKFPIKWTAPEAINYG 191
Query: 218 LPEISGYKVDIWSSGVTL 235
I K D+WS G+ L
Sbjct: 192 TFTI---KSDVWSFGILL 206
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 43 DLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIG 102
+ LG G +G+V M + AVK K+ + P+ + E L+K LQH+ ++
Sbjct: 29 ERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMS--PDAFLA---EANLMKQLQHQRLVR 82
Query: 103 LVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L V ++ +Y+I EY G L D L + K I + Q+ +G+ ++ +
Sbjct: 83 LYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 139
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIAN-G 217
IH+D++ N+L++ + KI+DFG+A + D+ T +G+ P+ + APE N G
Sbjct: 140 YIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEYTAREGAKFPIKWTAPEAINYG 195
Query: 218 LPEISGYKVDIWSSGVTL 235
I K D+WS G+ L
Sbjct: 196 TFTI---KSDVWSFGILL 210
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 33/209 (15%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR-EIRLLKMLQHRN--VI 101
+G G KV ++L+ ++ + K L+ N ++ R EI L LQ + +I
Sbjct: 16 IGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 71
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPI--WQAHGYFLQLLDGLEYLHS 159
L D + D Q +Y++ME G + L+S KK I W+ Y+ +L+ + +H
Sbjct: 72 RLYDYEITD--QYIYMVME--CGNID--LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 125
Query: 160 QGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV----FQAPEIA 215
GI+H D+KP N L+ +DG LK+ DFG+A + DT + + S V + PE
Sbjct: 126 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQ----MQPDTTSVVKDSQVGTVNYMPPEAI 180
Query: 216 NGLPE---------ISGYKVDIWSSGVTL 235
+ K D+WS G L
Sbjct: 181 KDMSSSRENGKSKSKISPKSDVWSLGCIL 209
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
++ +G GS+G V + AVKI K + P E+ +L+ +H N
Sbjct: 39 MLSTRIGSGSFGTV---YKGKWHGDVAVKILKV--VDPTPEQFQAFRNEVAVLRKTRHVN 93
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLD------- 152
++ + D + ++ ++C G S+ YK + + QL+D
Sbjct: 94 ILLFMGYMTKDN---LAIVTQWCEG-------SSLYKHLHVQETKFQMFQLIDIARQTAQ 143
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAP 212
G++YLH++ IIH+D+K N+ L T+KI DFG+A + + GS ++ AP
Sbjct: 144 GMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP 203
Query: 213 EI---ANGLPEISGYKVDIWSSGVTL 235
E+ + P ++ D++S G+ L
Sbjct: 204 EVIRMQDNNP--FSFQSDVYSYGIVL 227
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVD----REIRLLK 93
KY D++G G V+ + T AVKI + + P V RE +L+
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 94 MLQ-HRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLL 151
+ H ++I L+D + + M+L+ + G L D L T + LL
Sbjct: 155 QVAGHPHIITLIDSY--ESSSFMFLVFDLMRKGELFDYL--TEKVALSEKETRSIMRSLL 210
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQA 211
+ + +LH+ I+H+D+KP N+LL + +++SDFG + L+ + + G+P + A
Sbjct: 211 EAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP---GEKLRELCGTPGYLA 267
Query: 212 PEIAN-GLPEIS---GYKVDIWSSGVTL 235
PEI + E G +VD+W+ GV L
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVIL 295
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
+LG G GKV E T + A+K+ L P VD + +++ +
Sbjct: 36 VLGLGVNGKVLECFHRRTGQKCALKL-----LYDSPKARQEVDHH---WQASGGPHIVCI 87
Query: 104 VDVFVN--DKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
+DV+ N K+ + +IME GG L + + F +A + +++LHS
Sbjct: 88 LDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH 147
Query: 161 GIIHKDIKPGNLLLTL---DGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANG 217
I H+D+KP NLL T D LK++DFG A+ + + T +P + APE+
Sbjct: 148 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT----QNALQTPCYTPYYVAPEVLG- 202
Query: 218 LPEISGYKVDIWSSGVTL 235
PE D+WS GV +
Sbjct: 203 -PEKYDKSCDMWSLGVIM 219
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 41 MGDLLGEGSYGKVKEM----LDSETLCRR-AVKIFKKKKLQ---RIPNGEINVDREIRLL 92
+G LG G++G+V E +D CR AVK+ K+ R E+ + L+
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI-----LI 85
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDS-----TPYKKFP------- 139
+ H NV+ L+ M +I+E+C G L L S PYK P
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 140 --IWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
+ Y Q+ G+E+L S+ IH+D+ N+LL+ +KI DFG+A D++
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDP 202
Query: 198 DTITTSQGS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
D + P+ + APE + + D+WS GV L
Sbjct: 203 DYVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLL 240
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR-EIRLLKMLQHRN--VI 101
+G G KV ++L+ ++ + K L+ N ++ R EI L LQ + +I
Sbjct: 36 IGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 91
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPI--WQAHGYFLQLLDGLEYLHS 159
L D + D Q +Y++ME G + L+S KK I W+ Y+ +L+ + +H
Sbjct: 92 RLYDYEITD--QYIYMVME--CGNID--LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 160 QGIIHKDIKPGNLLLTLDGTLKISDFGVAESL 191
GI+H D+KP N L+ +DG LK+ DFG+A +
Sbjct: 146 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 176
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 36/200 (18%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVK-----IFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
+G GS+G+V M D +T + AVK +F+ ++L + ++ R + L ++
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL--VACAGLSSPRIVPLYGAVREGP 123
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHS 159
V++F M L+ +G L + P + A Y Q L+GLEYLH+
Sbjct: 124 ---WVNIF-------MELLEGGSLGQLIKQMGCLPEDR-----ALYYLGQALEGLEYLHT 168
Query: 160 QGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHDDTITTS-------QGSPVFQA 211
+ I+H D+K N+LL+ DG+ + DFG A + L D + S G+ A
Sbjct: 169 RRILHGDVKADNVLLSSDGSRAALCDFGHA----LCLQPDGLGKSLLTGDYIPGTETHMA 224
Query: 212 PEIANGLPEISGYKVDIWSS 231
PE+ G P KVDIWSS
Sbjct: 225 PEVVMGKP--CDAKVDIWSS 242
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 15/184 (8%)
Query: 37 GKYVMGDL-LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
G+++ D+ +G GS+ V + LD+ET A + +KL + E LK L
Sbjct: 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFK--EEAEXLKGL 82
Query: 96 QHRNVIGLVDVFVNDKKQK--MYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLD 152
QH N++ D + + K K + L+ E G L+ L K + ++ + Q+L
Sbjct: 83 QHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRS--WCRQILK 140
Query: 153 GLEYLHSQG--IIHKDIKPGNLLLT-LDGTLKISDFGVAESLDMFLHDDTITTSQGSPVF 209
GL++LH++ IIH+D+K N+ +T G++KI D G+A I G+P F
Sbjct: 141 GLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI----GTPEF 196
Query: 210 QAPE 213
APE
Sbjct: 197 XAPE 200
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 36/200 (18%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVK-----IFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
+G GS+G+V M D +T + AVK +F+ ++L + ++ R + L ++
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL--VACAGLSSPRIVPLYGAVREGP 139
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHS 159
V++F M L+ +G L + P + A Y Q L+GLEYLH+
Sbjct: 140 ---WVNIF-------MELLEGGSLGQLIKQMGCLPEDR-----ALYYLGQALEGLEYLHT 184
Query: 160 QGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHDDTITTS-------QGSPVFQA 211
+ I+H D+K N+LL+ DG+ + DFG A + L D + S G+ A
Sbjct: 185 RRILHGDVKADNVLLSSDGSRAALCDFGHA----LCLQPDGLGKSLLTGDYIPGTETHMA 240
Query: 212 PEIANGLPEISGYKVDIWSS 231
PE+ G P KVDIWSS
Sbjct: 241 PEVVMGKP--CDAKVDIWSS 258
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 41 MGDLLGEGSYGKVKEM----LDSETLCRR-AVKIFKKKKLQ---RIPNGEINVDREIRLL 92
+G LG G++G+V E +D CR AVK+ K+ R E+ + L+
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI-----LI 76
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDS-----TPYKKFP------- 139
+ H NV+ L+ M +I E+C G L L S PYK P
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLM-VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 140 --IWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
+ Y Q+ G+E+L S+ IH+D+ N+LL+ +KI DFG+A D++
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDP 193
Query: 198 DTITTSQGS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
D + P+ + APE + + D+WS GV L
Sbjct: 194 DYVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLL 231
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 41 MGDLLGEGSYGKVKEM----LDSETLCRR-AVKIFKKKKLQ---RIPNGEINVDREIRLL 92
+G LG G++G+V E +D CR AVK+ K+ R E+ + L+
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI-----LI 76
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDS-----TPYKKFP------- 139
+ H NV+ L+ M +I E+C G L L S PYK P
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLM-VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 140 --IWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
+ Y Q+ G+E+L S+ IH+D+ N+LL+ +KI DFG+A D++
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDP 193
Query: 198 DTITTSQGS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
D + P+ + APE + + D+WS GV L
Sbjct: 194 DYVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLL 231
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 23/200 (11%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEIN-VDREIRLLK-----MLQH 97
+LG+GS+GKV T AVKI KK + + + E V++ + L + Q
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
+ +D ++Y +MEY GG M +F A Y ++ GL +L
Sbjct: 408 HSCFQTMD--------RLYFVMEYVNGG-DLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 458
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ--GSPVFQAPEIA 215
S+GII++D+K N++L +G +KI+DFG+ + +++ D +TT G+P + APEI
Sbjct: 459 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIW---DGVTTKXFCGTPDYIAPEII 514
Query: 216 NGLPEISGYKVDIWSSGVTL 235
P G VD W+ GV L
Sbjct: 515 AYQP--YGKSVDWWAFGVLL 532
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 26 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKLRHEKLVQLY 79
Query: 105 DVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y++MEY G L D L K + Q Q+ G+ Y+ +
Sbjct: 80 AVV---SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWTAPEAA--LYG 190
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 191 RFTIKSDVWSFGILL 205
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 43 DLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIG 102
+ LG G +G+V M + AVK K+ + P+ + E L+K LQH+ ++
Sbjct: 15 ERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMS--PDAFLA---EANLMKQLQHQRLVR 68
Query: 103 LVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQG 161
L V ++ +Y+I EY G L D L + K I + Q+ +G+ ++ +
Sbjct: 69 LYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 125
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIAN-G 217
IH++++ N+L++ + KI+DFG+A + D+ T +G+ P+ + APE N G
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLAR----LIEDNEYTAREGAKFPIKWTAPEAINYG 181
Query: 218 LPEISGYKVDIWSSGVTL 235
I K D+WS G+ L
Sbjct: 182 TFTI---KSDVWSFGILL 196
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 15/153 (9%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGY 146
E L+K LQH+ ++ L V ++ +Y+I EY G L D L + K I +
Sbjct: 58 EANLMKQLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 147 FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS 206
Q+ +G+ ++ + IH+D++ N+L++ + KI+DFG+A + D T +G+
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR----LIEDAEXTAREGA 170
Query: 207 --PV-FQAPEIAN-GLPEISGYKVDIWSSGVTL 235
P+ + APE N G I K D+WS G+ L
Sbjct: 171 KFPIKWTAPEAINYGTFTI---KSDVWSFGILL 200
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 33/197 (16%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR---EIRLLKMLQHRNVI 101
LG G +G+V M + AVK K G ++V+ E ++K LQH ++
Sbjct: 190 LGAGQFGEVW-MATYNKHTKVAVKTMKP--------GSMSVEAFLAEANVMKTLQHDKLV 240
Query: 102 GLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
L V K+ +Y+I E+ G L D L S K P+ + + Q+ +G+ ++ +
Sbjct: 241 KLHAVVT---KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 297
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV-FQAPEIAN-GL 218
IH+D++ N+L++ KI+DFG+A F P+ + APE N G
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGLARVGAKF------------PIKWTAPEAINFGS 345
Query: 219 PEISGYKVDIWSSGVTL 235
I K D+WS G+ L
Sbjct: 346 FTI---KSDVWSFGILL 359
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 30/189 (15%)
Query: 37 GKYVMGDLLGEGSYGKVKE----------MLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
G+ +G +G GS+G V + ML+ + ++ FK
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-------------- 69
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHG 145
E+ +L+ +H N++ + K ++ ++ ++C G L L ++ KF + +
Sbjct: 70 -EVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLID 124
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
Q G++YLH++ IIH+D+K N+ L D T+KI DFG+A + G
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 206 SPVFQAPEI 214
S ++ APE+
Sbjct: 185 SILWMAPEV 193
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 41 MGDLLGEGSYGKVKEM----LDSETLCRR-AVKIFKKKKLQ---RIPNGEINVDREIRLL 92
+G LG G++G+V E +D CR AVK+ K+ R E+ + L+
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI-----LI 76
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDS-----TPYKKFP------- 139
+ H NV+ L+ M +I+E+C G L L S PYK P
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 140 --IWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
+ Y Q+ G+E+L S+ IH+D+ N+LL+ +KI DFG+A D+
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDP 193
Query: 198 DTITTSQGS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
D + P+ + APE + + D+WS GV L
Sbjct: 194 DXVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLL 231
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 34 KMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLK 93
K + ++ + + G+G++G V+ L E +V I K + R N E+ + ++ L
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQ--LGKEKSTGMSVAIKKVIQDPRFRNRELQIMQD---LA 74
Query: 94 MLQHRNVIGLVDVFVN---DKKQKMYL--IMEYCVGGLQDMLDSTPYKKF--PIWQAHGY 146
+L H N++ L F ++ +YL +MEY L + ++ P +
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVF 134
Query: 147 FLQLLDGLEYLH--SQGIIHKDIKPGNLLLT-LDGTLKISDFGVAESLDMFLHDDTITTS 203
QL+ + LH S + H+DIKP N+L+ DGTLK+ DFG A+ L + S
Sbjct: 135 LFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICS 194
Query: 204 QGSPVFQAPEIANGLPEISGYKVDIWSSGV 233
+ ++APE+ G + VDIWS G
Sbjct: 195 R---YYRAPELIFGNQHYTT-AVDIWSVGC 220
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 192 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKLRHEKLVQLY 245
Query: 105 DVFVNDKKQKMYLIMEY-CVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y++ EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 246 AVV---SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWTAPEAA--LYG 356
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 357 RFTIKSDVWSFGILL 371
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 192 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKLRHEKLVQLY 245
Query: 105 DVFVNDKKQKMYLIMEY-CVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y++ EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 246 AVV---SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWTAPEAA--LYG 356
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 357 RFTIKSDVWSFGILL 371
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 24/211 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKI--------FKKKKLQRIPNGEINVDREIR 90
Y ++LG G V+ + T AVKI F +++Q + + +E+
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL---KEVD 75
Query: 91 LLKMLQ-HRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFL 148
+L+ + H N+I L D + + +L+ + G L D L T +
Sbjct: 76 ILRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMR 131
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
LL+ + LH I+H+D+KP N+LL D +K++DFG + LD + + + G+P
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD---PGEKLRSVCGTPS 188
Query: 209 FQAPEI----ANGLPEISGYKVDIWSSGVTL 235
+ APEI N G +VD+WS+GV +
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 41 MGDLLGEGSYGKVKEM----LDSETLCRR-AVKIFKKKKLQ---RIPNGEINVDREIRLL 92
+G LG G++G+V E +D CR AVK+ K+ R E+ + L+
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI-----LI 85
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDS-----TPYKKFP------- 139
+ H NV+ L+ M +I+E+C G L L S PYK P
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 140 --IWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
+ Y Q+ G+E+L S+ IH+D+ N+LL+ +KI DFG+A D+
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDP 202
Query: 198 DTITTSQGS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
D + P+ + APE + + D+WS GV L
Sbjct: 203 DXVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLL 240
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 75 LQRIPNGEINVDREIRLLKMLQHRNVIGLVDVF-VNDKKQKMYLIMEYCVGGLQDMLDST 133
++ I G ++ D I K++ + + LV ++ V K++ +++I EY G
Sbjct: 38 IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 97
Query: 134 PYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDM 193
+F Q + + +EYL S+ +H+D+ N L+ G +K+SDFG L
Sbjct: 98 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG----LSR 153
Query: 194 FLHDDTITTSQGS--PVFQAPEIANGLPEISGY-----KVDIWSSGVTL 235
++ DD T+S+GS PV +P PE+ Y K DIW+ GV +
Sbjct: 154 YVLDDEYTSSRGSKFPVRWSP------PEVLMYSKFSSKSDIWAFGVLM 196
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 41 MGDLLGEGSYGKVKEM----LDSETLCRR-AVKIFKKKKLQ---RIPNGEINVDREIRLL 92
+G LG G++G+V E +D CR AVK+ K+ R E+ + L+
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI-----LI 76
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDS-----TPYKKFP------- 139
+ H NV+ L+ M +I E+C G L L S PYK P
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLM-VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 140 --IWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
+ Y Q+ G+E+L S+ IH+D+ N+LL+ +KI DFG+A D+
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDP 193
Query: 198 DTITTSQGS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
D + P+ + APE + + D+WS GV L
Sbjct: 194 DXVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLL 231
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 26 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKLRHEKLVQLY 79
Query: 105 DVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y+++EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 80 AVV---SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLAR----LIEDNEXTARQGAKFPIKWTAPEAA--LYG 190
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 191 RFTIKSDVWSFGILL 205
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 30/189 (15%)
Query: 37 GKYVMGDLLGEGSYGKVKE----------MLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
G+ +G +G GS+G V + ML+ + ++ FK
Sbjct: 12 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-------------- 57
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHG 145
E+ +L+ +H N++ + K ++ ++ ++C G L L ++ KF + +
Sbjct: 58 -EVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLID 112
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
Q G++YLH++ IIH+D+K N+ L D T+KI DFG+A + G
Sbjct: 113 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSG 172
Query: 206 SPVFQAPEI 214
S ++ APE+
Sbjct: 173 SILWMAPEV 181
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 37 GKYVMGDLLGEGSYGKVKE----------MLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
G+ +G +G GS+G V + ML+ + ++ FK
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-------------- 81
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
E+ +L+ +H N++ + K ++ ++ ++C G S+ Y I +
Sbjct: 82 -EVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEG-------SSLYHHLHIIETKFE 130
Query: 147 FLQLLD-------GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
++L+D G++YLH++ IIH+D+K N+ L D T+KI DFG+A +
Sbjct: 131 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ 190
Query: 200 ITTSQGSPVFQAPEIANGLPEIS-GYKVDIWSSGVTL 235
GS ++ APE+ + ++ D+++ G+ L
Sbjct: 191 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 227
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 19 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKLRHEKLVQLY 72
Query: 105 DVFVNDKKQKMYLIMEY-CVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y++ EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 73 AVV---SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 129
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWTAPEAA--LYG 183
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 184 RFTIKSDVWSFGILL 198
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 26 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKLRHEKLVQLY 79
Query: 105 DVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y+++EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 80 AVV---SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWTAPEAA--LYG 190
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 191 RFTIKSDVWSFGILL 205
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 37 GKYVMGDLLGEGSYGKVKE----------MLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
G+ +G +G GS+G V + ML+ + ++ FK
Sbjct: 28 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-------------- 73
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
E+ +L+ +H N++ + K ++ ++ ++C G S+ Y I +
Sbjct: 74 -EVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEG-------SSLYHHLHIIETKFE 122
Query: 147 FLQLLD-------GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
++L+D G++YLH++ IIH+D+K N+ L D T+KI DFG+A +
Sbjct: 123 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ 182
Query: 200 ITTSQGSPVFQAPEIANGLPEIS-GYKVDIWSSGVTL 235
GS ++ APE+ + ++ D+++ G+ L
Sbjct: 183 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 219
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 23/221 (10%)
Query: 18 RVDSDQVIYDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFK-KKKLQ 76
+V D V Y + +KV +G+G +G+V + D + A+K+ + +K+
Sbjct: 89 QVPHDHVAYRYEVLKV-----------IGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFH 137
Query: 77 RIPNGEINVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYK 136
R EI + +R NVI +++ F + + + E L +++ ++
Sbjct: 138 RQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF--RNHICMTFELLSMNLYELIKKNKFQ 195
Query: 137 KFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGT--LKISDFGVAESLDMF 194
F + + +L L+ LH IIH D+KP N+LL G +K+ DFG + +
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS----CY 251
Query: 195 LHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
H Q S ++APE+ G G +D+WS G L
Sbjct: 252 EHQRVYXXIQ-SRFYRAPEVILG--ARYGMPIDMWSLGCIL 289
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 43 DLLGEGSYGKV-KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
++LG G +GKV K L TL AVK K+++ Q GE+ E+ ++ M HRN++
Sbjct: 44 NILGRGGFGKVYKGRLADGTLV--AVKRLKEERXQ---GGELQFQTEVEMISMAVHRNLL 98
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPI-W-QAHGYFLQLLDGLEYLHS 159
L F +++ + G + L P + P+ W + L GL YLH
Sbjct: 99 RLRG-FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD 157
Query: 160 QG---IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE-IA 215
IIH+D+K N+LL + + DFG+A+ +D + +G+ APE ++
Sbjct: 158 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDXHVXXAVRGTIGHIAPEYLS 216
Query: 216 NGLPEISGYKVDIWSSGVTL 235
G S K D++ GV L
Sbjct: 217 TG---KSSEKTDVFGYGVML 233
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 275 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKLRHEKLVQLY 328
Query: 105 DVFVNDKKQKMYLIMEY-CVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y++ EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 329 AVV---SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 385
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWTAPEAA--LYG 439
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 440 RFTIKSDVWSFGILL 454
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 42/195 (21%)
Query: 37 GKYVMGDLLGEGSYGKVKE----------MLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
G+ +G +G GS+G V + ML+ + ++ FK
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-------------- 53
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
E+ +L+ +H N++ + K ++ ++ ++C G S+ Y I +
Sbjct: 54 -EVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEG-------SSLYHHLHIIETKFE 102
Query: 147 FLQLLD-------GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
++L+D G++YLH++ IIH+D+K N+ L D T+KI DFG+A +
Sbjct: 103 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ 162
Query: 200 ITTSQGSPVFQAPEI 214
GS ++ APE+
Sbjct: 163 FEQLSGSILWMAPEV 177
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 26 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKLRHEKLVQLY 79
Query: 105 DVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y++ EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 80 AVV---SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWTAPEAA--LYG 190
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 191 RFTIKSDVWSFGILL 205
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 37 GKYVMGDLLGEGSYGKVKE----------MLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
G+ +G +G GS+G V + ML+ + ++ FK
Sbjct: 35 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-------------- 80
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
E+ +L+ +H N++ + K ++ ++ ++C G S+ Y I +
Sbjct: 81 -EVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEG-------SSLYHHLHIIETKFE 129
Query: 147 FLQLLD-------GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
++L+D G++YLH++ IIH+D+K N+ L D T+KI DFG+A +
Sbjct: 130 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 189
Query: 200 ITTSQGSPVFQAPEIANGLPEIS-GYKVDIWSSGVTL 235
GS ++ APE+ + ++ D+++ G+ L
Sbjct: 190 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 226
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 23 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKLRHEKLVQLY 76
Query: 105 DVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y++ EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 77 AVV---SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYV 133
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWTAPEAA--LYG 187
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 188 RFTIKSDVWSFGILL 202
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 26 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKLRHEKLVQLY 79
Query: 105 DVFVNDKKQKMYLIMEY-CVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y++ EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 80 AVV---SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWTAPEAA--LYG 190
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 191 RFTIKSDVWSFGILL 205
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 192 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKLRHEKLVQLY 245
Query: 105 DVFVNDKKQKMYLIMEY-CVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y++ EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 246 AVV---SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWTAPEAA--LYG 356
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 357 RFTIKSDVWSFGILL 371
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 24/211 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKI--------FKKKKLQRIPNGEINVDREIR 90
Y ++LG G V+ + T AVKI F +++Q + + +E+
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL---KEVD 75
Query: 91 LLKMLQ-HRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFL 148
+L+ + H N+I L D + + +L+ + G L D L T +
Sbjct: 76 ILRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMR 131
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
LL+ + LH I+H+D+KP N+LL D +K++DFG + LD + + G+P
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD---PGEKLREVCGTPS 188
Query: 209 FQAPEI----ANGLPEISGYKVDIWSSGVTL 235
+ APEI N G +VD+WS+GV +
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 23 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKLRHEKLVQLY 76
Query: 105 DVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y++ EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 77 AVV---SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYV 133
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLAR----LIEDNEWTARQGAKFPIKWTAPEAA--LYG 187
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 188 RFTIKSDVWSFGILL 202
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 37 GKYVMGDLLGEGSYGKVKE----------MLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
G+ +G +G GS+G V + ML+ + ++ FK
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-------------- 81
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
E+ +L+ +H N++ + K ++ ++ ++C G S+ Y I +
Sbjct: 82 -EVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEG-------SSLYHHLHIIETKFE 130
Query: 147 FLQLLD-------GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
++L+D G++YLH++ IIH+D+K N+ L D T+KI DFG+A +
Sbjct: 131 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 190
Query: 200 ITTSQGSPVFQAPEIANGLPEIS-GYKVDIWSSGVTL 235
GS ++ APE+ + ++ D+++ G+ L
Sbjct: 191 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 227
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 42/195 (21%)
Query: 37 GKYVMGDLLGEGSYGKVKE----------MLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
G+ +G +G GS+G V + ML+ + ++ FK
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-------------- 58
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
E+ +L+ +H N++ + K ++ ++ ++C G S+ Y I +
Sbjct: 59 -EVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEG-------SSLYHHLHIIETKFE 107
Query: 147 FLQLLD-------GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
++L+D G++YLH++ IIH+D+K N+ L D T+KI DFG+A +
Sbjct: 108 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 167
Query: 200 ITTSQGSPVFQAPEI 214
GS ++ APE+
Sbjct: 168 FEQLSGSILWMAPEV 182
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 24/211 (11%)
Query: 39 YVMGDLLGEGSYGKVKEMLDSETLCRRAVKI--------FKKKKLQRIPNGEINVDREIR 90
Y ++LG G V+ + T AVKI F +++Q + + +E+
Sbjct: 6 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL---KEVD 62
Query: 91 LLKMLQ-HRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFL 148
+L+ + H N+I L D + + +L+ + G L D L T +
Sbjct: 63 ILRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMR 118
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
LL+ + LH I+H+D+KP N+LL D +K++DFG + LD + + G+P
Sbjct: 119 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD---PGEKLREVCGTPS 175
Query: 209 FQAPEI----ANGLPEISGYKVDIWSSGVTL 235
+ APEI N G +VD+WS+GV +
Sbjct: 176 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 206
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 17 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKLRHEKLVQLY 70
Query: 105 DVFVNDKKQKMYLIMEY-CVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y++ EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 71 AVV---SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 127
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWTAPEAA--LYG 181
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 182 RFTIKSDVWSFGILL 196
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 15 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKLRHEKLVQLY 68
Query: 105 DVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y++ EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 69 AVV---SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 125
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWTAPEAA--LYG 179
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 180 RFTIKSDVWSFGILL 194
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 42/195 (21%)
Query: 37 GKYVMGDLLGEGSYGKVKE----------MLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
G+ +G +G GS+G V + ML+ + ++ FK
Sbjct: 10 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-------------- 55
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
E+ +L+ +H N++ + K ++ ++ ++C G S+ Y I +
Sbjct: 56 -EVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEG-------SSLYHHLHIIETKFE 104
Query: 147 FLQLLD-------GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
++L+D G++YLH++ IIH+D+K N+ L D T+KI DFG+A +
Sbjct: 105 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 164
Query: 200 ITTSQGSPVFQAPEI 214
GS ++ APE+
Sbjct: 165 FEQLSGSILWMAPEV 179
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 42/195 (21%)
Query: 37 GKYVMGDLLGEGSYGKVKE----------MLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
G+ +G +G GS+G V + ML+ + ++ FK
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-------------- 58
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
E+ +L+ +H N++ + K ++ ++ ++C G S+ Y I +
Sbjct: 59 -EVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEG-------SSLYHHLHIIETKFE 107
Query: 147 FLQLLD-------GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
++L+D G++YLH++ IIH+D+K N+ L D T+KI DFG+A +
Sbjct: 108 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 167
Query: 200 ITTSQGSPVFQAPEI 214
GS ++ APE+
Sbjct: 168 FEQLSGSILWMAPEV 182
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 20/170 (11%)
Query: 75 LQRIPNGEINVDREIRLLKMLQHRNVIGLVDVF-VNDKKQKMYLIMEYCVGG-LQDMLDS 132
++ I G ++ D I K++ + + LV ++ V K++ +++I EY G L + L
Sbjct: 33 IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 92
Query: 133 TPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLD 192
++ F Q + + +EYL S+ +H+D+ N L+ G +K+SDFG L
Sbjct: 93 MRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG----LS 147
Query: 193 MFLHDDTITTSQGS--PVFQAPEIANGLPEISGY-----KVDIWSSGVTL 235
++ DD T+S GS PV +P PE+ Y K DIW+ GV +
Sbjct: 148 RYVLDDEYTSSVGSKFPVRWSP------PEVLMYSKFSSKSDIWAFGVLM 191
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 42/195 (21%)
Query: 37 GKYVMGDLLGEGSYGKVKE----------MLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
G+ +G +G GS+G V + ML+ + ++ FK
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-------------- 53
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
E+ +L+ +H N++ + K ++ ++ ++C G S+ Y I +
Sbjct: 54 -EVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEG-------SSLYHHLHIIETKFE 102
Query: 147 FLQLLD-------GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
++L+D G++YLH++ IIH+D+K N+ L D T+KI DFG+A +
Sbjct: 103 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162
Query: 200 ITTSQGSPVFQAPEI 214
GS ++ APE+
Sbjct: 163 FEQLSGSILWMAPEV 177
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 87/191 (45%), Gaps = 18/191 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V M D +T + AVK K +L E+ E+ L ++ L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVK---KVRL------EVFRAEELMACAGLTSPRIVPLY 132
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIH 164
++ ME GG L P +A Y Q L+GLEYLHS+ I+H
Sbjct: 133 GAVREGPWVNIF--MELLEGGSLGQLVKE-QGCLPEDRALYYLGQALEGLEYLHSRRILH 189
Query: 165 KDIKPGNLLLTLDGT-LKISDFGVAESLDM-FLHDDTITTS--QGSPVFQAPEIANGLPE 220
D+K N+LL+ DG+ + DFG A L L D +T G+ APE+ G
Sbjct: 190 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG--R 247
Query: 221 ISGYKVDIWSS 231
KVD+WSS
Sbjct: 248 SCDAKVDVWSS 258
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 30/189 (15%)
Query: 37 GKYVMGDLLGEGSYGKVKE----------MLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
G+ +G +G GS+G V + ML+ + ++ FK
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-------------- 69
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHG 145
E+ +L+ +H N++ + ++ ++ ++C G L L ++ KF + +
Sbjct: 70 -EVGVLRKTRHVNILLFMGY---STAPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLID 124
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
Q G++YLH++ IIH+D+K N+ L D T+KI DFG+A + G
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 206 SPVFQAPEI 214
S ++ APE+
Sbjct: 185 SILWMAPEV 193
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 26 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKLRHEKLVQLY 79
Query: 105 DVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y++ EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 80 AVV---SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWTAPEAA--LYG 190
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 191 RFTIKSDVWSFGILL 205
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 20/170 (11%)
Query: 75 LQRIPNGEINVDREIRLLKMLQHRNVIGLVDVF-VNDKKQKMYLIMEYCVGG-LQDMLDS 132
++ I G ++ D I K++ + + LV ++ V K++ +++I EY G L + L
Sbjct: 37 IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 96
Query: 133 TPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLD 192
++ F Q + + +EYL S+ +H+D+ N L+ G +K+SDFG L
Sbjct: 97 MRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG----LS 151
Query: 193 MFLHDDTITTSQGS--PVFQAPEIANGLPEISGY-----KVDIWSSGVTL 235
++ DD T+S GS PV +P PE+ Y K DIW+ GV +
Sbjct: 152 RYVLDDEYTSSVGSKFPVRWSP------PEVLMYSKFSSKSDIWAFGVLM 195
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 75 LQRIPNGEINVDREIRLLKMLQHRNVIGLVDVF-VNDKKQKMYLIMEYCVGGLQDMLDST 133
++ I G ++ D I K++ + + LV ++ V K++ +++I EY G
Sbjct: 44 IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 103
Query: 134 PYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDM 193
+F Q + + +EYL S+ +H+D+ N L+ G +K+SDFG L
Sbjct: 104 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG----LSR 159
Query: 194 FLHDDTITTSQGS--PVFQAPEIANGLPEISGY-----KVDIWSSGVTL 235
++ DD T+S GS PV +P PE+ Y K DIW+ GV +
Sbjct: 160 YVLDDEYTSSVGSKFPVRWSP------PEVLMYSKFSSKSDIWAFGVLM 202
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 45 LGEGSYGKVKEM---LDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
LG+GS+G V+ S AVK K L + P + RE+ + L HRN+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSLDHRNLI 74
Query: 102 GLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
L V + M ++ E +G L D L F + Y +Q+ +G+ YL S+
Sbjct: 75 RLYGVVLT---PPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV---FQAPEIANG 217
IH+D+ NLLL +KI DFG+ +L +DD + V + APE
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ--NDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 218 LPEISGYKVDIWSSGVTL 235
+ D W GVTL
Sbjct: 189 --RTFSHASDTWMFGVTL 204
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 75 LQRIPNGEINVDREIRLLKMLQHRNVIGLVDVF-VNDKKQKMYLIMEYCVGGLQDMLDST 133
++ I G ++ D I K++ + + LV ++ V K++ +++I EY G
Sbjct: 38 IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 97
Query: 134 PYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDM 193
+F Q + + +EYL S+ +H+D+ N L+ G +K+SDFG L
Sbjct: 98 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG----LSR 153
Query: 194 FLHDDTITTSQGS--PVFQAPEIANGLPEISGY-----KVDIWSSGVTL 235
++ DD T+S GS PV +P PE+ Y K DIW+ GV +
Sbjct: 154 YVLDDEYTSSVGSKFPVRWSP------PEVLMYSKFSSKSDIWAFGVLM 196
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 45 LGEGSYGKVKEM---LDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
LG+GS+G V+ S AVK K L + P + RE+ + L HRN+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSLDHRNLI 74
Query: 102 GLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
L V + M ++ E +G L D L F + Y +Q+ +G+ YL S+
Sbjct: 75 RLYGVVLT---PPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV---FQAPEIANG 217
IH+D+ NLLL +KI DFG+ +L +DD + V + APE
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ--NDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 218 LPEISGYKVDIWSSGVTL 235
+ D W GVTL
Sbjct: 189 --RTFSHASDTWMFGVTL 204
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 45 LGEGSYGKVKEM---LDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
LG+GS+G V+ S AVK K L + P + RE+ + L HRN+I
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSLDHRNLI 78
Query: 102 GLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
L V + M ++ E +G L D L F + Y +Q+ +G+ YL S+
Sbjct: 79 RLYGVVLTPP---MKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESK 134
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV---FQAPEIANG 217
IH+D+ NLLL +KI DFG+ +L +DD + V + APE
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ--NDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 218 LPEISGYKVDIWSSGVTL 235
+ D W GVTL
Sbjct: 193 --RTFSHASDTWMFGVTL 208
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 45 LGEGSYGKVKEM---LDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
LG+GS+G V+ S AVK K L + P + RE+ + L HRN+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSLDHRNLI 74
Query: 102 GLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
L V + M ++ E +G L D L F + Y +Q+ +G+ YL S+
Sbjct: 75 RLYGVVLT---PPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV---FQAPEIANG 217
IH+D+ NLLL +KI DFG+ +L +DD + V + APE
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ--NDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 218 LPEISGYKVDIWSSGVTL 235
+ D W GVTL
Sbjct: 189 --RTFSHASDTWMFGVTL 204
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 34 KMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLK 93
K + +Y + L+G+GS+G+V + D A+KI K KK + +I E+RLL+
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQI----EVRLLE 105
Query: 94 MLQHRNVIGLVDVFVNDKKQKMY-----LIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL 148
++ + + V+ K+ M+ L+ E L D+L +T ++ + +
Sbjct: 106 LMNKHDT-EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQ 164
Query: 149 QLLDGLEYLHSQ--GIIHKDIKPGNLLLT--LDGTLKISDFGVAESLDMFLHDDTITTSQ 204
Q+ L +L + IIH D+KP N+LL +KI DFG + L ++
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXI----- 219
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
S +++PE+ G+P +D+WS G L
Sbjct: 220 QSRFYRSPEVLLGMP--YDLAIDMWSLGCIL 248
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 45 LGEGSYGKVKEM---LDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
LG+GS+G V+ S AVK K L + P + RE+ + L HRN+I
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSLDHRNLI 84
Query: 102 GLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
L V + M ++ E +G L D L F + Y +Q+ +G+ YL S+
Sbjct: 85 RLYGVVLT---PPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESK 140
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV---FQAPEIANG 217
IH+D+ NLLL +KI DFG+ +L +DD + V + APE
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ--NDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 218 LPEISGYKVDIWSSGVTL 235
+ D W GVTL
Sbjct: 199 --RTFSHASDTWMFGVTL 214
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 193 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGNMS--PEAFL---QEAQVMKKLRHEKLVQLY 246
Query: 105 DVFVNDKKQKMYLIMEY-CVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y++ EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 247 AVV---SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 303
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG L + D+ T QG+ P+ + APE A L
Sbjct: 304 HRDLRAANILVGENLVCKVADFG----LGRLIEDNEYTARQGAKFPIKWTAPEAA--LYG 357
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 358 RFTIKSDVWSFGILL 372
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 45 LGEGSYGKVKEM---LDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
LG+GS+G V+ S AVK K L + P + RE+ + L HRN+I
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSLDHRNLI 78
Query: 102 GLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
L V + M ++ E +G L D L F + Y +Q+ +G+ YL S+
Sbjct: 79 RLYGVVLT---PPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESK 134
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV---FQAPEIANG 217
IH+D+ NLLL +KI DFG+ +L +DD + V + APE
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ--NDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 218 LPEISGYKVDIWSSGVTL 235
+ D W GVTL
Sbjct: 193 --RTFSHASDTWMFGVTL 208
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 44 LLGEGSYGKV-KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIG 102
++G G +G+V K ML + + + K K ++ E ++ H N+I
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 103 LVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGI 162
L V K + M +I EY G D +F + Q G + G++YL +
Sbjct: 111 LEGVI--SKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY 168
Query: 163 IHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD---TITTSQGS-PV-FQAPEIANG 217
+H+D+ N+L+ + K+SDFG L L DD T TTS G P+ + APE +
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFG----LSRVLEDDPEATYTTSGGKIPIRWTAPEAISY 224
Query: 218 LPEISGYKVDIWSSGVTL 235
S D+WS G+ +
Sbjct: 225 RKFTSA--SDVWSFGIVM 240
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 41 MGDLLGEGSYGKVKEM----LDSETLCRR-AVKIFKKKKLQ---RIPNGEINVDREIRLL 92
+G LG G++G+V E +D CR AVK+ K+ R E+ + L+
Sbjct: 32 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI-----LI 86
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDS-----TPYKK--------F 138
+ H NV+ L+ M +I+E+C G L L S PYK
Sbjct: 87 HIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFL 145
Query: 139 PIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD 198
+ Y Q+ G+E+L S+ IH+D+ N+LL+ +KI DFG+A D+ D
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPD 203
Query: 199 TITTSQGS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ P+ + APE + + D+WS GV L
Sbjct: 204 XVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLL 240
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 45 LGEGSYGKVKEM---LDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
LG+GS+G V+ S AVK K L + P + RE+ + L HRN+I
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSLDHRNLI 84
Query: 102 GLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
L V + M ++ E +G L D L F + Y +Q+ +G+ YL S+
Sbjct: 85 RLYGVVLT---PPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESK 140
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV---FQAPEIANG 217
IH+D+ NLLL +KI DFG+ +L +DD + V + APE
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ--NDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 218 LPEISGYKVDIWSSGVTL 235
+ D W GVTL
Sbjct: 199 --RTFSHASDTWMFGVTL 214
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 34 KMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLK 93
K + +Y + L+G+GS+G+V + D A+KI K KK + +I E+RLL+
Sbjct: 32 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQI----EVRLLE 86
Query: 94 MLQHRNVIGLVDVFVNDKKQKMY-----LIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL 148
++ + + V+ K+ M+ L+ E L D+L +T ++ + +
Sbjct: 87 LMNKHDT-EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQ 145
Query: 149 QLLDGLEYLHSQ--GIIHKDIKPGNLLLT--LDGTLKISDFGVAESLDMFLHDDTITTSQ 204
Q+ L +L + IIH D+KP N+LL +KI DFG + L ++
Sbjct: 146 QMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXI----- 200
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
S +++PE+ G+P +D+WS G L
Sbjct: 201 QSRFYRSPEVLLGMP--YDLAIDMWSLGCIL 229
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K ++H ++ L
Sbjct: 26 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKIRHEKLVQLY 79
Query: 105 DVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y++ EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 80 AVV---SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWTAPEAA--LYG 190
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 191 RFTIKSDVWSFGILL 205
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 75 LQRIPNGEINVDREIRLLKMLQHRNVIGLVDVF-VNDKKQKMYLIMEYCVGGLQDMLDST 133
++ I G ++ D I K++ + + LV ++ V K++ +++I EY G
Sbjct: 53 IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 112
Query: 134 PYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDM 193
+F Q + + +EYL S+ +H+D+ N L+ G +K+SDFG L
Sbjct: 113 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG----LSR 168
Query: 194 FLHDDTITTSQGS--PVFQAPEIANGLPEISGY-----KVDIWSSGVTL 235
++ DD T+S GS PV +P PE+ Y K DIW+ GV +
Sbjct: 169 YVLDDEYTSSVGSKFPVRWSP------PEVLMYSKFSSKSDIWAFGVLM 211
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N++ L+D+ + + LI EY +L Y + Y +LL L+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCH 142
Query: 159 SQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
SQGI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE----FYHPGKEYNVRVASRYFKGPELLV 198
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + Y +D+WS G
Sbjct: 199 DLQDYD-YSLDMWSLGCMF 216
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N++ L+D+ + + LI EY +L Y + Y +LL L+Y H
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCH 143
Query: 159 SQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
SQGI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE----FYHPGKEYNVRVASRYFKGPELLV 199
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + Y +D+WS G
Sbjct: 200 DLQDYD-YSLDMWSLGCMF 217
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 26 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKLRHEKLVQLY 79
Query: 105 DVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ +Y++ EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 80 AVV---SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D+ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWTAPEAA--LYG 190
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 191 RFTIKSDVWSFGILL 205
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N++ L+D+ + + LI EY +L Y + Y +LL L+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCH 142
Query: 159 SQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
SQGI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE----FYHPGKEYNVRVASRYFKGPELLV 198
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + Y +D+WS G
Sbjct: 199 DLQDYD-YSLDMWSLGCMF 216
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N++ L+D+ + + LI EY +L Y + Y +LL L+Y H
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCH 143
Query: 159 SQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
SQGI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE----FYHPGKEYNVRVASRYFKGPELLV 199
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + Y +D+WS G
Sbjct: 200 DLQDYD-YSLDMWSLGCMF 217
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N++ L+D+ + + LI EY +L Y + Y +LL L+Y H
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCH 144
Query: 159 SQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
SQGI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE----FYHPGKEYNVRVASRYFKGPELLV 200
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + Y +D+WS G
Sbjct: 201 DLQDYD-YSLDMWSLGCMF 218
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N++ L+D+ + + LI EY +L Y + Y +LL L+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCH 142
Query: 159 SQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
SQGI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE----FYHPGKEYNVRVASRYFKGPELLV 198
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + Y +D+WS G
Sbjct: 199 DLQDYD-YSLDMWSLGCMF 216
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N++ L+D+ + + LI EY +L Y + Y +LL L+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCH 142
Query: 159 SQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
SQGI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE----FYHPGKEYNVRVASRYFKGPELLV 198
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + Y +D+WS G
Sbjct: 199 DLQDYD-YSLDMWSLGCMF 216
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N++ L+D+ + + LI EY +L Y + Y +LL L+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCH 142
Query: 159 SQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
SQGI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE----FYHPGKEYNVRVASRYFKGPELLV 198
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + Y +D+WS G
Sbjct: 199 DLQDYD-YSLDMWSLGCMF 216
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N++ L+D+ + + LI EY +L Y + Y +LL L+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCH 142
Query: 159 SQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
SQGI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE----FYHPGKEYNVRVASRYFKGPELLV 198
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + Y +D+WS G
Sbjct: 199 DLQDYD-YSLDMWSLGCMF 216
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N++ L+D+ + + LI EY +L Y + Y +LL L+Y H
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCH 163
Query: 159 SQGIIHKDIKPGNLLLTLD-GTLKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
SQGI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE----FYHPGKEYNVRVASRYFKGPELLV 219
Query: 217 GLPEISGYKVDIWSSGVTL 235
L + Y +D+WS G
Sbjct: 220 DLQDYD-YSLDMWSLGCMF 237
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRR-----AVKIFKKKKLQRIPNGEINVDREIRLLKM 94
V+G LGEG +GKV + R AVK+ K+ P+ ++ E +LK
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---SPSELRDLLSEFNVLKQ 82
Query: 95 LQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDML----------------------D 131
+ H +VI L D + LI+EY G L+ L D
Sbjct: 83 VNHPHVIKLYGACSQDGP--LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 132 STPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL 191
+ + + Q+ G++YL ++H+D+ N+L+ +KISDFG+ S
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGL--SR 198
Query: 192 DMFLHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
D++ D + SQG + I + I + D+WS GV L
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG GS+G+V M D +T + AVK K +L E+ E+ L ++ L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVK---KVRL------EVFRAEELMACAGLTSPRIVPLY 151
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIH 164
++ ME GG L P +A Y Q L+GLEYLHS+ I+H
Sbjct: 152 GAVREGPWVNIF--MELLEGGSLGQLVKE-QGCLPEDRALYYLGQALEGLEYLHSRRILH 208
Query: 165 KDIKPGNLLLTLDGT-LKISDFGVAESLD------MFLHDDTITTSQGSPVFQAPEIANG 217
D+K N+LL+ DG+ + DFG A L L D I G+ APE+ G
Sbjct: 209 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIP---GTETHMAPEVVLG 265
Query: 218 LPEISGYKVDIWSS 231
KVD+WSS
Sbjct: 266 --RSCDAKVDVWSS 277
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 34 KMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLK 93
K + +Y + L+G+GS+G+V + D A+KI K KK + +I E+RLL+
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQI----EVRLLE 105
Query: 94 MLQHRNVIGLVDVFVNDKKQKMY-----LIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL 148
++ + + V+ K+ M+ L+ E L D+L +T ++ + +
Sbjct: 106 LMNKHDT-EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQ 164
Query: 149 QLLDGLEYLHSQ--GIIHKDIKPGNLLLT--LDGTLKISDFGVAESLDMFLHDDTITTSQ 204
Q+ L +L + IIH D+KP N+LL +KI DFG + L ++
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXI----- 219
Query: 205 GSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
S +++PE+ G+P +D+WS G L
Sbjct: 220 QSRFYRSPEVLLGMP--YDLAIDMWSLGCIL 248
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 14/152 (9%)
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
RE+++L ++G F +D + + + ME+ GG D + K+ P
Sbjct: 63 RELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKE-AKRIPEEILGKV 119
Query: 147 FLQLLDGLEYLHSQ-GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
+ +L GL YL + I+H+D+KP N+L+ G +K+ DFGV+ L D + G
Sbjct: 120 SIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVG 175
Query: 206 SPVFQAPEIANGLPEISGYKV--DIWSSGVTL 235
+ + APE G + Y V DIWS G++L
Sbjct: 176 TRSYMAPERLQG----THYSVQSDIWSMGLSL 203
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 75 LQRIPNGEINVDREIRLLKMLQHRNVIGLVDVF-VNDKKQKMYLIMEYCVGGLQDMLDST 133
++ I G ++ D I K++ + + LV ++ V K++ +++I EY G
Sbjct: 53 IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 112
Query: 134 PYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDM 193
+F Q + + +EYL S+ +H+D+ N L+ G +K+SDFG L
Sbjct: 113 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG----LSR 168
Query: 194 FLHDDTITTSQGS--PVFQAPEIANGLPEISGY-----KVDIWSSGVTL 235
++ DD T+S GS PV +P PE+ Y K DIW+ GV +
Sbjct: 169 YVLDDEETSSVGSKFPVRWSP------PEVLMYSKFSSKSDIWAFGVLM 211
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRR-----AVKIFKKKKLQRIPNGEINVDREIRLLKM 94
V+G LGEG +GKV + R AVK+ K+ P+ ++ E +LK
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---SPSELRDLLSEFNVLKQ 82
Query: 95 LQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDML----------------------D 131
+ H +VI L D + LI+EY G L+ L D
Sbjct: 83 VNHPHVIKLYGACSQDGP--LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 132 STPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL 191
+ + + Q+ G++YL ++H+D+ N+L+ +KISDFG+ S
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGL--SR 198
Query: 192 DMFLHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
D++ D + SQG + I + I + D+WS GV L
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 66 AVKIFKKKKLQ---RIPNGEINVDREIRLLKMLQH--RNVIGLVDVFVNDKKQKMYLIME 120
A+K +K ++ +PNG V E+ LLK + VI L+D F ++ LI+E
Sbjct: 80 AIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFSGVIRLLDWF--ERPDSFVLILE 136
Query: 121 YCVGGLQDMLDS-TPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-G 178
+QD+ D T A +F Q+L+ + + H+ G++H+DIK N+L+ L+ G
Sbjct: 137 R-PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG 195
Query: 179 TLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
LK+ DFG L D T G+ V+ PE G +WS G+ L
Sbjct: 196 ELKLIDFGSG----ALLKDTVYTDFDGTRVYSPPEWIR-YHRYHGRSAAVWSLGILL 247
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRR-----AVKIFKKKKLQRIPNGEINVDREIRLLKM 94
V+G LGEG +GKV + R AVK+ K+ P+ ++ E +LK
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---SPSELRDLLSEFNVLKQ 82
Query: 95 LQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDML----------------------D 131
+ H +VI L D + LI+EY G L+ L D
Sbjct: 83 VNHPHVIKLYGACSQDGP--LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 132 STPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESL 191
+ + + Q+ G++YL ++H+D+ N+L+ +KISDFG+ S
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGL--SR 198
Query: 192 DMFLHDDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
D++ D + SQG + I + I + D+WS GV L
Sbjct: 199 DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 42/195 (21%)
Query: 37 GKYVMGDLLGEGSYGKVKE----------MLDSETLCRRAVKIFKKKKLQRIPNGEINVD 86
G+ +G +G GS+G V + ML+ + ++ FK
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-------------- 53
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
E+ +L+ +H N++ + ++ ++ ++C G S+ Y I +
Sbjct: 54 -EVGVLRKTRHVNILLFMGY---STAPQLAIVTQWCEG-------SSLYHHLHIIETKFE 102
Query: 147 FLQLLD-------GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
++L+D G++YLH++ IIH+D+K N+ L D T+KI DFG+A +
Sbjct: 103 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162
Query: 200 ITTSQGSPVFQAPEI 214
GS ++ APE+
Sbjct: 163 FEQLSGSILWMAPEV 177
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 12/94 (12%)
Query: 148 LQLLDGLEYLHSQ-GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT-SQG 205
+ ++ LE+LHS+ +IH+D+KP N+L+ G +K+ DFG++ +L D T G
Sbjct: 160 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISG----YLVDSVAKTIDAG 215
Query: 206 SPVFQAPEIANGLPEIS--GYKV--DIWSSGVTL 235
+ APE N PE++ GY V DIWS G+T+
Sbjct: 216 CKPYMAPERIN--PELNQKGYSVKSDIWSLGITM 247
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 12/94 (12%)
Query: 148 LQLLDGLEYLHSQ-GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT-TSQG 205
+ ++ LE+LHS+ +IH+D+KP N+L+ G +K+ DFG++ +L DD G
Sbjct: 116 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISG----YLVDDVAKDIDAG 171
Query: 206 SPVFQAPEIANGLPEIS--GYKV--DIWSSGVTL 235
+ APE N PE++ GY V DIWS G+T+
Sbjct: 172 CKPYMAPERIN--PELNQKGYSVKSDIWSLGITM 203
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 19/195 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG+G +G+V M R A+K K + P + +E +++K L+H ++ L
Sbjct: 16 LGQGCFGEVW-MGTWNGTTRVAIKTLKPGTMS--PEAFL---QEAQVMKKLRHEKLVQLY 69
Query: 105 DVFVNDKKQKMYLIMEY-CVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V ++ + ++ EY G L D L K + Q Q+ G+ Y+ +
Sbjct: 70 AVV---SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 126
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPE 220
H+D++ N+L+ + K++DFG+A + D+ T QG+ P+ + APE A L
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLAR----LIEDNEXTARQGAKFPIKWTAPEAA--LYG 180
Query: 221 ISGYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 181 RFTIKSDVWSFGILL 195
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 43 DLLGEGSYGKV-KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
++LG G +GKV K L L AVK K+++ Q GE+ E+ ++ M HRN++
Sbjct: 36 NILGRGGFGKVYKGRLADGXLV--AVKRLKEERTQ---GGELQFQTEVEMISMAVHRNLL 90
Query: 102 GLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPI-W-QAHGYFLQLLDGLEYLHS 159
L F +++ + G + L P + P+ W + L GL YLH
Sbjct: 91 RLRG-FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD 149
Query: 160 QG---IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE-IA 215
IIH+D+K N+LL + + DFG+A+ +D + +G APE ++
Sbjct: 150 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDXHVXXAVRGXIGHIAPEYLS 208
Query: 216 NGLPEISGYKVDIWSSGVTL 235
G S K D++ GV L
Sbjct: 209 TG---KSSEKTDVFGYGVML 225
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
RE L++ L H NV+ L+ + + + L+ C G L + S P + + +
Sbjct: 71 REGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS-PQRNPTVKDLISF 129
Query: 147 FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS 206
LQ+ G+EYL Q +H+D+ N +L T+K++DFG+A + D + Q
Sbjct: 130 GLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDIL----DREYYSVQQH 185
Query: 207 PVFQAPEIANGLPEISGY----KVDIWSSGVTL 235
+ P L + Y K D+WS GV L
Sbjct: 186 RHARLPVKWTALESLQTYRFTTKSDVWSFGVLL 218
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 19/193 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+G+G +G V ML + AVK K + E +V + L+H N++ L+
Sbjct: 20 IGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQAFLAEASV------MTQLRHSNLVQLL 71
Query: 105 DVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V V ++K +Y++ EY G L D L S + L + + +EYL +
Sbjct: 72 GVIV-EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 130
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS- 222
H+D+ N+L++ D K+SDFG+ + T T + + APE L E +
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKE-----ASSTQDTGKLPVKWTAPE---ALREAAF 182
Query: 223 GYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 183 STKSDVWSFGILL 195
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 24/161 (14%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRL-LKMLQHR 98
V +LG G GKV ++ + +R + F K LQ P RE+ L + Q
Sbjct: 21 VTSQVLGLGINGKVLQIFN-----KRTQEKFALKMLQDCPKAR----REVELHWRASQCP 71
Query: 99 NVIGLVDVFVN--DKKQKMYLIMEYCVGG-----LQDMLDSTPYKKFPIWQAHGYFLQLL 151
+++ +VDV+ N ++ + ++ME GG +QD D + F +A +
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIG 127
Query: 152 DGLEYLHSQGIIHKDIKPGNLLLT---LDGTLKISDFGVAE 189
+ ++YLHS I H+D+KP NLL T + LK++DFG A+
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 41 MGDLLGEGSYGKVKEM----LDSETLCRR-AVKIFKKKKLQ---RIPNGEINVDREIRLL 92
+G LG G++G+V E +D R AVK+ K+ R E+ + L+
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKI-----LI 85
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDS-----TPYKKF-----PIW 141
+ H NV+ L+ M +I+E+C G L L S PYK +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLE 144
Query: 142 QAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
Y Q+ G+E+L S+ IH+D+ N+LL+ +KI DFG+A D++ D +
Sbjct: 145 HLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVR 202
Query: 202 TSQGS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
P+ + APE + + D+WS GV L
Sbjct: 203 KGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLL 236
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 81 GEINVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFP 139
GE E ++L+ + R V+ L + + K + L++ GG L+ + FP
Sbjct: 227 GEAMALNEKQILEKVNSRFVVSLA--YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 140 IWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
+A Y ++ GLE LH + I+++D+KP N+LL G ++ISD G+A + T
Sbjct: 285 EARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQT 341
Query: 200 ITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
I G+ + APE+ E + D W+ G L
Sbjct: 342 IKGRVGTVGYMAPEVVKN--ERYTFSPDWWALGCLL 375
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 37 GKYVMGDLLGEGSYGKV---KEMLDSETLCRRAV---KIFKK------KKLQRIPNGEIN 84
+Y++ LG G + V K+M+++ + + V K++ + K LQR+ + +
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 85 VDREI---RLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIW 141
+ + +LK+L H N G V V ++ E L ++ ++ P+
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHV-------VMVFEVLGENLLALIKKYEHRGIPLI 131
Query: 142 QAHGYFLQLLDGLEYLHSQ-GIIHKDIKPGNLLLTL-DGTLKISDFGVAESLDMFLHDDT 199
QLL GL+Y+H + GIIH DIKP N+L+ + D + +A+ + +D+
Sbjct: 132 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 200 ITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
T S + +++PE+ G P G DIWS+ +
Sbjct: 192 YTNSIQTREYRSPEVLLGAP--WGCGADIWSTACLI 225
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 35/218 (16%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDR----EIRLLKMLQ-HR 98
+L EG + V E D V ++ L+R+ + E +R E+ +K L H
Sbjct: 35 VLAEGGFAFVYEAQD--------VGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHP 86
Query: 99 NVIGLVDVFV-----NDKKQKMYLIM-EYCVGGLQDMLDSTPYK-KFPIWQAHGYFLQLL 151
N++ +D Q +L++ E C G L + L + F Q
Sbjct: 87 NIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTC 146
Query: 152 DGLEYLHSQ--GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMF-----------LHDD 198
++++H Q IIH+D+K NLLL+ GT+K+ DFG A ++ + L ++
Sbjct: 147 RAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEE 206
Query: 199 TITTSQGSPVFQAPEIANGLPEIS-GYKVDIWSSGVTL 235
IT + +P+++ PEI + G K DIW+ G L
Sbjct: 207 EITRNT-TPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 37 GKYVMGDLLGEGSYGKV---KEMLDSETLCRRAV---KIFKK------KKLQRIPNGEIN 84
+Y++ LG G + V K+M+++ + + V K++ + K LQR+ + +
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 85 VDREI---RLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIW 141
+ + +LK+L H N G V V ++ E L ++ ++ P+
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHV-------VMVFEVLGENLLALIKKYEHRGIPLI 131
Query: 142 QAHGYFLQLLDGLEYLHSQ-GIIHKDIKPGNLLLTL-DGTLKISDFGVAESLDMFLHDDT 199
QLL GL+Y+H + GIIH DIKP N+L+ + D + +A+ + +D+
Sbjct: 132 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 200 ITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
T S + +++PE+ G P G DIWS+ +
Sbjct: 192 YTNSIQTREYRSPEVLLGAP--WGCGADIWSTACLI 225
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 81 GEINVDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFP 139
GE E ++L+ + R V+ L + + K + L++ GG L+ + FP
Sbjct: 227 GEAMALNEKQILEKVNSRFVVSLA--YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 140 IWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
+A Y ++ GLE LH + I+++D+KP N+LL G ++ISD G+A + T
Sbjct: 285 EARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQT 341
Query: 200 ITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
I G+ + APE+ E + D W+ G L
Sbjct: 342 IKGRVGTVGYMAPEVVKN--ERYTFSPDWWALGCLL 375
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 43 DLLGEGSYGKVKEMLDSETLCRRAVKIFKKKK----LQRIPNGEINVDR-----EIRLLK 93
+++G G +G+V CR +K KK+ ++ + G R E ++
Sbjct: 20 EVIGAGEFGEV---------CRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMG 70
Query: 94 MLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDG 153
+H N+I L V N + ++ E+ G D +F + Q G + G
Sbjct: 71 QFEHPNIIRLEGVVTNS--MPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 128
Query: 154 LEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV---FQ 210
+ YL +H+D+ N+L+ + K+SDFG++ L+ D T T+S G + +
Sbjct: 129 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT 188
Query: 211 APEIANGLPEISGYKVDIWSSGVTL 235
APE A + + D WS G+ +
Sbjct: 189 APE-AIAFRKFTSAS-DAWSYGIVM 211
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 41 MGDLLGEGSYGKVKEM----LDSETLCRR-AVKIFKKKKLQ---RIPNGEINVDREIRLL 92
+G LG G++G+V E +D R AVK+ K+ R E+ + L+
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKI-----LI 85
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDS-----TPYKKF-----PIW 141
+ H NV+ L+ M +I+E+C G L L S PYK +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLE 144
Query: 142 QAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
Y Q+ G+E+L S+ IH+D+ N+LL+ +KI DFG+A D++ D +
Sbjct: 145 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLAR--DIYKDPDYVR 202
Query: 202 TSQGS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
P+ + APE + + D+WS GV L
Sbjct: 203 KGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLL 236
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
RE +++ L + ++ L+ V + + + L+ME GG ++ P+
Sbjct: 59 REAQIMHQLDNPYIVRLIGVC---QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL 115
Query: 147 FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS 206
Q+ G++YL + +H+D+ N+LL KISDFG++++L DD+ T++ +
Sbjct: 116 LHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA---DDSYYTARSA 172
Query: 207 ---PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
P+ + APE N + S + D+WS GVT+
Sbjct: 173 GKWPLKWYAPECIN-FRKFSS-RSDVWSYGVTM 203
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 38 KYVMGDLLGEGSYGKVKEMLDSETL-CRRAVKIFKK-KKLQRIPNGEINVDREIRLLKML 95
+Y + LGEG++G+V + +D R A+KI K +K + EINV +I
Sbjct: 34 RYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPD 93
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
+ + D F D M + E D L Y +PI Q QL ++
Sbjct: 94 NKNLCVQMFDWF--DYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVK 151
Query: 156 YLHSQGIIHKDIKPGNLL-------LTLD------------GTLKISDFGVAESLDMFLH 196
+LH + H D+KP N+L LT + +++ DFG A + D H
Sbjct: 152 FLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA-TFDHEHH 210
Query: 197 DDTITTSQGSPVFQAPEIANGLPEISGYK--VDIWSSGVTL 235
++T ++APE+ L G+ D+WS G +
Sbjct: 211 STIVSTRH----YRAPEVILEL----GWSQPCDVWSIGCII 243
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 33/213 (15%)
Query: 43 DLLGEGSYGKV-KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLK--MLQHRN 99
+ +G+G YG+V + E + AVKIF + E + RE L ML+H N
Sbjct: 14 ECVGKGRYGEVWRGSWQGENV---AVKIFSSRD-------EKSWFRETELYNTVMLRHEN 63
Query: 100 VIGLV--DVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEY 156
++G + D+ +++LI Y +G L D L T + L + GL +
Sbjct: 64 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI---VLSIASGLAH 120
Query: 157 LH-----SQG---IIHKDIKPGNLLLTLDGTLKISDFGVA--ESLDMFLHDDTITTSQGS 206
LH +QG I H+D+K N+L+ +G I+D G+A S D G+
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180
Query: 207 PVFQAPEIANGLPEISGY----KVDIWSSGVTL 235
+ APE+ + ++ + +VDIW+ G+ L
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 213
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 43 DLLGEGSYGKVKEMLDSETLCRRAVKIFKKKK----LQRIPNGEINVDR-----EIRLLK 93
+++G G +G+V CR +K KK+ ++ + G R E ++
Sbjct: 22 EVIGAGEFGEV---------CRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMG 72
Query: 94 MLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDG 153
+H N+I L V N + ++ E+ G D +F + Q G + G
Sbjct: 73 QFEHPNIIRLEGVVTNS--MPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 130
Query: 154 LEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV---FQ 210
+ YL +H+D+ N+L+ + K+SDFG++ L+ D T T+S G + +
Sbjct: 131 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT 190
Query: 211 APEIANGLPEISGYKVDIWSSGVTL 235
APE A + + D WS G+ +
Sbjct: 191 APE-AIAFRKFTSAS-DAWSYGIVM 213
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 47/220 (21%)
Query: 43 DLLGEGSYGKV-KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLK--MLQHRN 99
+ +G+G YG+V + E + AVKIF + E + RE L ML+H N
Sbjct: 14 ECVGKGRYGEVWRGSWQGENV---AVKIFSSRD-------EKSWFRETELYNTVMLRHEN 63
Query: 100 VIGLV--DVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEY 156
++G + D+ +++LI Y +G L D L T + L + GL +
Sbjct: 64 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI---VLSIASGLAH 120
Query: 157 LH-----SQG---IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ---- 204
LH +QG I H+D+K N+L+ +G I+D G+A +H +T+Q
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-----VMHSQ--STNQLDVG 173
Query: 205 -----GSPVFQAPEIANGLPEISGY----KVDIWSSGVTL 235
G+ + APE+ + ++ + +VDIW+ G+ L
Sbjct: 174 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 213
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 33/213 (15%)
Query: 43 DLLGEGSYGKV-KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLK--MLQHRN 99
+ +G+G YG+V + E + AVKIF + E + RE L ML+H N
Sbjct: 43 ECVGKGRYGEVWRGSWQGENV---AVKIFSSRD-------EKSWFRETELYNTVMLRHEN 92
Query: 100 VIGLV--DVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEY 156
++G + D+ +++LI Y +G L D L T + L + GL +
Sbjct: 93 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI---VLSIASGLAH 149
Query: 157 LH-----SQG---IIHKDIKPGNLLLTLDGTLKISDFGVA--ESLDMFLHDDTITTSQGS 206
LH +QG I H+D+K N+L+ +G I+D G+A S D G+
Sbjct: 150 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 209
Query: 207 PVFQAPEIANGLPEISGY----KVDIWSSGVTL 235
+ APE+ + ++ + +VDIW+ G+ L
Sbjct: 210 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 242
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 70
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I+E+ G L D L ++ Q+ +EYL
Sbjct: 71 LVQLLGVCT--REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 185 AYNKFSI---KSDVWAFGVLL 202
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 17/192 (8%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+G+G +G V ML + AVK K + E +V + L+H N++ L+
Sbjct: 29 IGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQAFLAEASV------MTQLRHSNLVQLL 80
Query: 105 DVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V V ++K +Y++ EY G L D L S + L + + +EYL +
Sbjct: 81 GVIV-EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 139
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
H+D+ N+L++ D K+SDFG+ + T T + + APE +
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTKE-----ASSTQDTGKLPVKWTAPEALR--EKKFS 192
Query: 224 YKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 193 TKSDVWSFGILL 204
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 70
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I+E+ G L D L ++ Q+ +EYL
Sbjct: 71 LVQLLGVCT--REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 185 AYNKFSI---KSDVWAFGVLL 202
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 148 LQLLDGLEYLHSQ-GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT-TSQG 205
+ ++ LE+LHS+ +IH+D+KP N+L+ G +K DFG++ +L DD G
Sbjct: 143 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGIS----GYLVDDVAKDIDAG 198
Query: 206 SPVFQAPEIANGLPEIS--GYKV--DIWSSGVT 234
+ APE N PE++ GY V DIWS G+T
Sbjct: 199 CKPYXAPERIN--PELNQKGYSVKSDIWSLGIT 229
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 68
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I E+ G L D L ++ Q+ +EYL
Sbjct: 69 LVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTFTAHAGAKFPIKWTAPESL 182
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 183 AYNKFSI---KSDVWAFGVLL 200
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 33/218 (15%)
Query: 41 MGDLLGEGSYGKVKEM----LDSETLCRR-AVKIFKKKKLQ---RIPNGEINVDREIRLL 92
+G LG G++G+V E +D R AVK+ K+ R E+ + L+
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKI-----LI 87
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDS-----TPYKKFPIWQAH-- 144
+ H NV+ L+ M +I+E+C G L L S PYK +++
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLT 146
Query: 145 -----GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
Y Q+ G+E+L S+ IH+D+ N+LL+ +KI DFG+A D+ D
Sbjct: 147 LEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDX 204
Query: 200 ITTSQGS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ P+ + APE + + D+WS GV L
Sbjct: 205 VRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLL 240
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 17/192 (8%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+G+G +G V ML + AVK K + E +V + L+H N++ L+
Sbjct: 14 IGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQAFLAEASV------MTQLRHSNLVQLL 65
Query: 105 DVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V V ++K +Y++ EY G L D L S + L + + +EYL +
Sbjct: 66 GVIV-EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 124
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISG 223
H+D+ N+L++ D K+SDFG+ + T T + + APE +
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKE-----ASSTQDTGKLPVKWTAPEALR--EKKFS 177
Query: 224 YKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 178 TKSDVWSFGILL 189
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 68
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I+E+ G L D L ++ Q+ +EYL
Sbjct: 69 LVQLLGVCT--REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTXTAHAGAKFPIKWTAPESL 182
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 183 AYNKFSI---KSDVWAFGVLL 200
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 75
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I+E+ G L D L ++ Q+ +EYL
Sbjct: 76 LVQLLGVCT--REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAPESL 189
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 190 AYNKFSI---KSDVWAFGVLL 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 71
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I+E+ G L D L ++ Q+ +EYL
Sbjct: 72 LVQLLGVCT--REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTXTAHAGAKFPIKWTAPESL 185
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 186 AYNKFSI---KSDVWAFGVLL 203
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 75
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I E+ G L D L ++ Q+ +EYL
Sbjct: 76 LVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 133
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAPESL 189
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 190 AYNKFSI---KSDVWAFGVLL 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 70
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I E+ G L D L ++ Q+ +EYL
Sbjct: 71 LVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 185 AYNKFSI---KSDVWAFGVLL 202
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 70
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I E+ G L D L ++ Q+ +EYL
Sbjct: 71 LVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 185 AYNKFSI---KSDVWAFGVLL 202
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 41 MGDLLGEGSYGKVKE---MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+G +GEG +G V + M A+K K + + +E ++ H
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL---QEALTMRQFDH 450
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHG--YFLQLLDGL 154
+++ L+ V + +++IME C +G L+ L +KF + A Y QL L
Sbjct: 451 PHIVKLIGVITENP---VWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTAL 504
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT-ITTSQGS-PV-FQA 211
YL S+ +H+DI N+L++ + +K+ DFG L ++ D T S+G P+ + A
Sbjct: 505 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFG----LSRYMEDSTYYKASKGKLPIKWMA 560
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE N S D+W GV +
Sbjct: 561 PESINFRRFTSA--SDVWMFGVCM 582
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N+I L D+ + + L+ E+ L Y+ + Y ++L L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH 148
Query: 159 SQGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
S GI+H+D+KP N+L+ + L++ D+G+AE F H S F+ PE+
Sbjct: 149 SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAE----FYHPGQEYNVRVASRYFKGPELLV 204
Query: 217 GLPEISGYKVDIWSSGVTL 235
++ Y +D+WS G L
Sbjct: 205 DY-QMYDYSLDMWSLGCML 222
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 72 KKKLQRIPNGEINVD---REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQ 127
K ++ I G ++ D E ++ L H ++ L V + ++ + L+ E+ G L
Sbjct: 53 KVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL--EQAPICLVFEFMEHGCLS 110
Query: 128 DMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGV 187
D L T F G L + +G+ YL +IH+D+ N L+ + +K+SDFG+
Sbjct: 111 DYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM 169
Query: 188 AESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPEISGY--KVDIWSSGVTL 235
F+ DD T+S G+ PV + +PE+ + S Y K D+WS GV +
Sbjct: 170 TR----FVLDDQYTSSTGTKFPVKWASPEVFS----FSRYSSKSDVWSFGVLM 214
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 19/193 (9%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+G+G +G V ML + AVK K + E +V + L+H N++ L+
Sbjct: 201 IGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQAFLAEASV------MTQLRHSNLVQLL 252
Query: 105 DVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGII 163
V V ++K +Y++ EY G L D L S + L + + +EYL +
Sbjct: 253 GVIV-EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 311
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEIS- 222
H+D+ N+L++ D K+SDFG+ + T T + + APE L E
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEA-----SSTQDTGKLPVKWTAPE---ALREKKF 363
Query: 223 GYKVDIWSSGVTL 235
K D+WS G+ L
Sbjct: 364 STKSDVWSFGILL 376
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 72
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I E+ G L D L ++ Q+ +EYL
Sbjct: 73 LVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAPAGAKFPIKWTAPESL 186
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 187 AYNKFSI---KSDVWAFGVLL 204
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 41 MGDLLGEGSYGKVKE---MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+G +GEG +G V + M A+K K + + +E ++ H
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL---QEALTMRQFDH 70
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHG--YFLQLLDGL 154
+++ L+ V + +++IME C +G L+ L +KF + A Y QL L
Sbjct: 71 PHIVKLIGVITENP---VWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTAL 124
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT-TSQGS-PV-FQA 211
YL S+ +H+DI N+L++ + +K+ DFG L ++ D T S+G P+ + A
Sbjct: 125 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFG----LSRYMEDSTXXKASKGKLPIKWMA 180
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE N S D+W GV +
Sbjct: 181 PESINFRRFTSA--SDVWMFGVCM 202
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 75
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I E+ G L D L ++ Q+ +EYL
Sbjct: 76 LVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAPESL 189
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 190 AYNKFSI---KSDVWAFGVLL 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 72
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I E+ G L D L ++ Q+ +EYL
Sbjct: 73 LVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAPESL 186
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 187 AYNKFSI---KSDVWAFGVLL 204
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 71
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I E+ G L D L ++ Q+ +EYL
Sbjct: 72 LVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAPAGAKFPIKWTAPESL 185
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 186 AYNKFSI---KSDVWAFGVLL 203
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 72
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I E+ G L D L ++ Q+ +EYL
Sbjct: 73 LVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAPESL 186
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 187 AYNKFSI---KSDVWAFGVLL 204
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 20 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 74
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I E+ G L D L ++ Q+ +EYL
Sbjct: 75 LVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 132
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAPESL 188
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 189 AYNKFSI---KSDVWAFGVLL 206
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 75
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I E+ G L D L ++ Q+ +EYL
Sbjct: 76 LVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAPESL 189
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 190 AYNKFSI---KSDVWAFGVLL 207
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
Query: 41 MGDLLGEGSYGKVKE---MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+G +GEG +G V + M A+K K + + +E ++ H
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL---QEALTMRQFDH 450
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHG--YFLQLLDGL 154
+++ L+ V + +++IME C +G L+ L +KF + A Y QL L
Sbjct: 451 PHIVKLIGVITENP---VWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTAL 504
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT-ITTSQGS-PV-FQA 211
YL S+ +H+DI N+L++ +K+ DFG L ++ D T S+G P+ + A
Sbjct: 505 AYLESKRFVHRDIAARNVLVSATDCVKLGDFG----LSRYMEDSTYYKASKGKLPIKWMA 560
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE N S D+W GV +
Sbjct: 561 PESINFRRFTSA--SDVWMFGVCM 582
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 29 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 83
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I E+ G L D L ++ Q+ +EYL
Sbjct: 84 LVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 141
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAPESL 197
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 198 AYNKFSI---KSDVWAFGVLL 215
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 41 MGDLLGEGSYGKVKE---MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+G +GEG +G V + M A+K K + + +E ++ H
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL---QEALTMRQFDH 67
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEY 156
+++ L+ V + +++IME C +G L+ L Y + Y QL L Y
Sbjct: 68 PHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 123
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT-ITTSQGS-PV-FQAPE 213
L S+ +H+DI N+L++ + +K+ DFG L ++ D T S+G P+ + APE
Sbjct: 124 LESKRFVHRDIAARNVLVSSNDCVKLGDFG----LSRYMEDSTYYKASKGKLPIKWMAPE 179
Query: 214 IANGLPEISGYKVDIWSSGVTL 235
N S D+W GV +
Sbjct: 180 SINFRRFTSA--SDVWMFGVCM 199
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 70
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I E+ G L D L ++ Q+ +EYL
Sbjct: 71 LVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 185 AYNKFSI---KSDVWAFGVLL 202
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 41 MGDLLGEGSYGKVKE---MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+G +GEG +G V + M A+K K + + +E ++ H
Sbjct: 17 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL---QEALTMRQFDH 73
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEY 156
+++ L+ V + +++IME C +G L+ L Y + Y QL L Y
Sbjct: 74 PHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 129
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT-ITTSQGS-PV-FQAPE 213
L S+ +H+DI N+L++ + +K+ DFG L ++ D T S+G P+ + APE
Sbjct: 130 LESKRFVHRDIAARNVLVSSNDCVKLGDFG----LSRYMEDSTYYKASKGKLPIKWMAPE 185
Query: 214 IANGLPEISGYKVDIWSSGVTL 235
N S D+W GV +
Sbjct: 186 SINFRRFTSA--SDVWMFGVCM 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 75
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I E+ G L D L ++ Q+ +EYL
Sbjct: 76 LVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTXTAHAGAKFPIKWTAPESL 189
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 190 AYNKFSI---KSDVWAFGVLL 207
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 41 MGDLLGEGSYGKVKE---MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+G +GEG +G V + M A+K K + + +E ++ H
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL---QEALTMRQFDH 70
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEY 156
+++ L+ V + +++IME C +G L+ L Y + Y QL L Y
Sbjct: 71 PHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 126
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT-ITTSQGS-PV-FQAPE 213
L S+ +H+DI N+L++ + +K+ DFG L ++ D T S+G P+ + APE
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFG----LSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 214 IANGLPEISGYKVDIWSSGVTL 235
N S D+W GV +
Sbjct: 183 SINFRRFTSA--SDVWMFGVCM 202
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N+I L+D + + L+ EY L Y+ + Y +LL L+Y H
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQL----YQILTDFDIRFYMYELLKALDYCH 149
Query: 159 SQGIIHKDIKPGNLLL-TLDGTLKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
S+GI+H+D+KP N+++ L++ D+G+AE F H S F+ PE+
Sbjct: 150 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE----FYHPAQEYNVRVASRYFKGPELLV 205
Query: 217 GLPEISGYKVDIWSSGVTL 235
++ Y +D+WS G L
Sbjct: 206 DY-QMYDYSLDMWSLGCML 223
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 41 MGDLLGEGSYGKVKE---MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+G +GEG +G V + M A+K K + + +E ++ H
Sbjct: 16 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL---QEALTMRQFDH 72
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEY 156
+++ L+ V + +++IME C +G L+ L Y + Y QL L Y
Sbjct: 73 PHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 128
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT-ITTSQGS-PV-FQAPE 213
L S+ +H+DI N+L++ + +K+ DFG L ++ D T S+G P+ + APE
Sbjct: 129 LESKRFVHRDIAARNVLVSSNDCVKLGDFG----LSRYMEDSTYYKASKGKLPIKWMAPE 184
Query: 214 IANGLPEISGYKVDIWSSGVTL 235
N S D+W GV +
Sbjct: 185 SINFRRFTSA--SDVWMFGVCM 204
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N+I L+D + + L+ EY L Y+ + Y +LL L+Y H
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQL----YQILTDFDIRFYMYELLKALDYCH 154
Query: 159 SQGIIHKDIKPGNLLL-TLDGTLKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
S+GI+H+D+KP N+++ L++ D+G+AE F H S F+ PE+
Sbjct: 155 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE----FYHPAQEYNVRVASRYFKGPELLV 210
Query: 217 GLPEISGYKVDIWSSGVTL 235
++ Y +D+WS G L
Sbjct: 211 DY-QMYDYSLDMWSLGCML 228
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 41 MGDLLGEGSYGKVKE---MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+G +GEG +G V + M A+K K + + +E ++ H
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL---QEALTMRQFDH 70
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEY 156
+++ L+ V + +++IME C +G L+ L Y + Y QL L Y
Sbjct: 71 PHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 126
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT-ITTSQGS-PV-FQAPE 213
L S+ +H+DI N+L++ + +K+ DFG L ++ D T S+G P+ + APE
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFG----LSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 214 IANGLPEISGYKVDIWSSGVTL 235
N S D+W GV +
Sbjct: 183 SINFRRFTSA--SDVWMFGVCM 202
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFK---KKKLQRIPNGEINVDREIRLL 92
I K V GE G++K L S+ A+K K +K +R GE ++ +
Sbjct: 49 IDKVVGAGEFGEVCSGRLK--LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI------M 100
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLD 152
H N+I L V K + + ++ EY G D +F + Q G +
Sbjct: 101 GQFDHPNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD--TITTSQGSPVFQ 210
G++YL G +H+D+ N+L+ + K+SDFG+A L+ DD T++G +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLE----DDPEAAYTTRGGKI-- 212
Query: 211 APEIANGLPEISGYK-----VDIWSSGVTL 235
I PE Y+ D+WS G+ L
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 41 MGDLLGEGSYGKVKE---MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+G +GEG +G V + M A+K K + + +E ++ H
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL---QEALTMRQFDH 75
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEY 156
+++ L+ V + +++IME C +G L+ L Y + Y QL L Y
Sbjct: 76 PHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 131
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT-ITTSQGS-PV-FQAPE 213
L S+ +H+DI N+L++ + +K+ DFG L ++ D T S+G P+ + APE
Sbjct: 132 LESKRFVHRDIAARNVLVSSNDCVKLGDFG----LSRYMEDSTYYKASKGKLPIKWMAPE 187
Query: 214 IANGLPEISGYKVDIWSSGVTL 235
N S D+W GV +
Sbjct: 188 SINFRRFTSA--SDVWMFGVCM 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 70
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I E+ G L D L ++ Q+ +EYL
Sbjct: 71 LVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 185 AYNKFSI---KSDVWAFGVLL 202
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
RE+++L ++G F +D + + + ME+ GG D + + P
Sbjct: 72 RELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKA-GRIPEQILGKV 128
Query: 147 FLQLLDGLEYLHSQ-GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
+ ++ GL YL + I+H+D+KP N+L+ G +K+ DFGV+ L D + G
Sbjct: 129 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVG 184
Query: 206 SPVFQAPEIANGLPEISGYKV--DIWSSGVTL 235
+ + +PE G + Y V DIWS G++L
Sbjct: 185 TRSYMSPERLQG----THYSVQSDIWSMGLSL 212
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 108/235 (45%), Gaps = 31/235 (13%)
Query: 14 SIFHRVDSDQVIYDNKTIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKK 73
S+F SD +K + +K + LG G++G V R+ V +KK
Sbjct: 313 SVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSV----------RQGVYRMRKK 362
Query: 74 KL----QRIPNGEINVD-----REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVG 124
++ + + G D RE +++ L + ++ L+ V + + + L+ME G
Sbjct: 363 QIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC---QAEALMLVMEMAGG 419
Query: 125 GLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISD 184
G ++ P+ Q+ G++YL + +H+++ N+LL KISD
Sbjct: 420 GPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISD 479
Query: 185 FGVAESLDMFLHDDTITTSQGS---PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
FG++++L DD+ T++ + P+ + APE N + S + D+WS GVT+
Sbjct: 480 FGLSKALGA---DDSYYTARSAGKWPLKWYAPECIN-FRKFSS-RSDVWSYGVTM 529
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N+I L D+ + + L+ E+ L Y+ + Y ++L L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH 148
Query: 159 SQGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
S GI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE----FYHPGQEYNVRVASRYFKGPELLV 204
Query: 217 GLPEISGYKVDIWSSGVTL 235
++ Y +D+WS G L
Sbjct: 205 DY-QMYDYSLDMWSLGCML 222
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
Query: 41 MGDLLGEGSYGKVKE---MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+G +GEG +G V + M A+K K + + +E ++ H
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL---QEALTMRQFDH 70
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHG--YFLQLLDGL 154
+++ L+ V + +++IME C +G L+ L +KF + A Y QL L
Sbjct: 71 PHIVKLIGVITENP---VWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTAL 124
Query: 155 EYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT-ITTSQGS-PV-FQA 211
YL S+ +H+DI N+L++ +K+ DFG L ++ D T S+G P+ + A
Sbjct: 125 AYLESKRFVHRDIAARNVLVSATDCVKLGDFG----LSRYMEDSTYYKASKGKLPIKWMA 180
Query: 212 PEIANGLPEISGYKVDIWSSGVTL 235
PE N S D+W GV +
Sbjct: 181 PESINFRRFTSA--SDVWMFGVCM 202
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 41 MGDLLGEGSYGKVKE---MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQH 97
+G +GEG +G V + M A+K K + + +E ++ H
Sbjct: 42 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL---QEALTMRQFDH 98
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEY 156
+++ L+ V + +++IME C +G L+ L Y + Y QL L Y
Sbjct: 99 PHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 154
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT-ITTSQGS-PV-FQAPE 213
L S+ +H+DI N+L++ + +K+ DFG L ++ D T S+G P+ + APE
Sbjct: 155 LESKRFVHRDIAARNVLVSSNDCVKLGDFG----LSRYMEDSTYYKASKGKLPIKWMAPE 210
Query: 214 IANGLPEISGYKVDIWSSGVTL 235
N S D+W GV +
Sbjct: 211 SINFRRFTSA--SDVWMFGVCM 230
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N+I L D+ + + L+ E+ L Y+ + Y ++L L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH 148
Query: 159 SQGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
S GI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE----FYHPGQEYNVRVASRYFKGPELLV 204
Query: 217 GLPEISGYKVDIWSSGVTL 235
++ Y +D+WS G L
Sbjct: 205 DY-QMYDYSLDMWSLGCML 222
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N+I L D+ + + L+ E+ L Y+ + Y ++L L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH 148
Query: 159 SQGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
S GI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE----FYHPGQEYNVRVASRYFKGPELLV 204
Query: 217 GLPEISGYKVDIWSSGVTL 235
++ Y +D+WS G L
Sbjct: 205 DY-QMYDYSLDMWSLGCML 222
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N+I L D+ + + L+ E+ L Y+ + Y ++L L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH 148
Query: 159 SQGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
S GI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE----FYHPGQEYNVRVASRYFKGPELLV 204
Query: 217 GLPEISGYKVDIWSSGVTL 235
++ Y +D+WS G L
Sbjct: 205 DY-QMYDYSLDMWSLGCML 222
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGY 146
E ++ L H ++ L V + ++ + L+ E+ G L D L T F G
Sbjct: 52 EAEVMMKLSHPKLVQLYGVCL--EQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGM 108
Query: 147 FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS 206
L + +G+ YL +IH+D+ N L+ + +K+SDFG+ F+ DD T+S G+
Sbjct: 109 CLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTR----FVLDDQYTSSTGT 164
Query: 207 --PV-FQAPEIANGLPEISGY--KVDIWSSGVTL 235
PV + +PE+ + S Y K D+WS GV +
Sbjct: 165 KFPVKWASPEVFS----FSRYSSKSDVWSFGVLM 194
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
RE+++L ++G F +D + + + ME+ GG D + + P
Sbjct: 80 RELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKK-AGRIPEQILGKV 136
Query: 147 FLQLLDGLEYLHSQ-GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
+ ++ GL YL + I+H+D+KP N+L+ G +K+ DFGV+ L D + G
Sbjct: 137 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVG 192
Query: 206 SPVFQAPEIANGLPEISGYKV--DIWSSGVTL 235
+ + +PE G + Y V DIWS G++L
Sbjct: 193 TRSYMSPERLQG----THYSVQSDIWSMGLSL 220
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N+I L D+ + + L+ E+ L Y+ + Y ++L L+Y H
Sbjct: 91 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH 146
Query: 159 SQGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
S GI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 147 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE----FYHPGQEYNVRVASRYFKGPELLV 202
Query: 217 GLPEISGYKVDIWSSGVTL 235
++ Y +D+WS G L
Sbjct: 203 DY-QMYDYSLDMWSLGCML 220
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
L+G G +GKV + + R K+ K++ G + EI L +H +++ L
Sbjct: 46 LIGHGVFGKV-----YKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSL 100
Query: 104 VDVFVNDKKQKMYLIMEYCVGG-LQDMLDST--PYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
+ D++ +M LI +Y G L+ L + P Q + GL YLH++
Sbjct: 101 IGFC--DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR 158
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE--IANGL 218
IIH+D+K N+LL + KI+DFG+++ +G+ + PE I L
Sbjct: 159 AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRL 218
Query: 219 PEISGYKVDIWSSGVTL 235
E K D++S GV L
Sbjct: 219 TE----KSDVYSFGVVL 231
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 44 LLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGL 103
L+G G +GKV + + R K+ K++ G + EI L +H +++ L
Sbjct: 46 LIGHGVFGKV-----YKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSL 100
Query: 104 VDVFVNDKKQKMYLIMEYCVGG-LQDMLDST--PYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
+ D++ +M LI +Y G L+ L + P Q + GL YLH++
Sbjct: 101 IGFC--DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR 158
Query: 161 GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE--IANGL 218
IIH+D+K N+LL + KI+DFG+++ +G+ + PE I L
Sbjct: 159 AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRL 218
Query: 219 PEISGYKVDIWSSGVTL 235
E K D++S GV L
Sbjct: 219 TE----KSDVYSFGVVL 231
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 12/195 (6%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
+G G+ G+V +M R+ + K+++R N E N + L +L+ + +V
Sbjct: 33 MGSGTCGQVWKMR-----FRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIV 87
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ-GII 163
F I +G + L P + ++ L YL + G+I
Sbjct: 88 QCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVI 147
Query: 164 HKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPE-IANGLPEIS 222
H+D+KP N+LL G +K+ DFG++ L + D S G + APE I P
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISGRL---VDDKAKDRSAGCAAYMAPERIDPPDPTKP 204
Query: 223 GY--KVDIWSSGVTL 235
Y + D+WS G++L
Sbjct: 205 DYDIRADVWSLGISL 219
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N+I L D+ + + L+ E+ L Y+ + Y ++L L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH 148
Query: 159 SQGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
S GI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE----FYHPGQEYNVRVASRYFKGPELLV 204
Query: 217 GLPEISGYKVDIWSSGVTL 235
++ Y +D+WS G L
Sbjct: 205 DY-QMYDYSLDMWSLGCML 222
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N+I L D+ + + L+ E+ L Y+ + Y ++L L+Y H
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH 147
Query: 159 SQGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
S GI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE----FYHPGQEYNVRVASRYFKGPELLV 203
Query: 217 GLPEISGYKVDIWSSGVTL 235
++ Y +D+WS G L
Sbjct: 204 DY-QMYDYSLDMWSLGCML 221
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N+I L D+ + + L+ E+ L Y+ + Y ++L L+Y H
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH 147
Query: 159 SQGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
S GI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE----FYHPGQEYNVRVASRYFKGPELLV 203
Query: 217 GLPEISGYKVDIWSSGVTL 235
++ Y +D+WS G L
Sbjct: 204 DY-QMYDYSLDMWSLGCML 221
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
RE+++L ++G F +D + + + ME+ GG D + + P
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKK-AGRIPEQILGKV 109
Query: 147 FLQLLDGLEYLHSQ-GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
+ ++ GL YL + I+H+D+KP N+L+ G +K+ DFGV+ L D + G
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVG 165
Query: 206 SPVFQAPEIANGLPEISGYKV--DIWSSGVTL 235
+ + +PE G + Y V DIWS G++L
Sbjct: 166 TRSYMSPERLQG----THYSVQSDIWSMGLSL 193
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
RE+++L ++G F +D + + + ME+ GG D + + P
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKK-AGRIPEQILGKV 109
Query: 147 FLQLLDGLEYLHSQ-GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
+ ++ GL YL + I+H+D+KP N+L+ G +K+ DFGV+ L D + G
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVG 165
Query: 206 SPVFQAPEIANGLPEISGYKV--DIWSSGVTL 235
+ + +PE G + Y V DIWS G++L
Sbjct: 166 TRSYMSPERLQG----THYSVQSDIWSMGLSL 193
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N+I L D+ + + L+ E+ L Y+ + Y ++L L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH 148
Query: 159 SQGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
S GI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE----FYHPGQEYNVRVASRYFKGPELLV 204
Query: 217 GLPEISGYKVDIWSSGVTL 235
++ Y +D+WS G L
Sbjct: 205 DY-QMYDYSLDMWSLGCML 222
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N+I L D+ + + L+ E+ L Y+ + Y ++L L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH 148
Query: 159 SQGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
S GI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE----FYHPGQEYNVRVASRYFKGPELLV 204
Query: 217 GLPEISGYKVDIWSSGVTL 235
++ Y +D+WS G L
Sbjct: 205 DY-QMYDYSLDMWSLGCML 222
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 45 LGEGSYGKV--KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIG 102
+G GS+G V E S+ AVKI ++ E RE+ ++K L+H N++
Sbjct: 45 IGAGSFGTVHRAEWHGSDV----AVKILMEQDFHAERVNEFL--REVAIMKRLRHPNIVL 98
Query: 103 LVDVFVNDKKQKMYLIMEY-CVGGLQDML-DSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
+ + + ++ EY G L +L S ++ + + G+ YLH++
Sbjct: 99 FMGAVT--QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 161 G--IIHKDIKPGNLLLTLDGTLKISDFGVAE-SLDMFLHDDTITTSQGSPVFQAPEIANG 217
I+H+D+K NLL+ T+K+ DFG++ FL + G+P + APE+
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXS---KXAAGTPEWMAPEVLRD 213
Query: 218 LPEISGYKVDIWSSGVTL 235
P S K D++S GV L
Sbjct: 214 EP--SNEKSDVYSFGVIL 229
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFK---KKKLQRIPNGEINVDREIRLL 92
I K V GE G++K L S+ A+K K +K +R GE ++ +
Sbjct: 49 IDKVVGAGEFGEVCSGRLK--LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI------M 100
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLD 152
H N+I L V K + + ++ EY G D +F + Q G +
Sbjct: 101 GQFDHPNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD--TITTSQGSPVFQ 210
G++YL G +H+D+ N+L+ + K+SDFG L L DD T++G +
Sbjct: 159 GMKYLSDMGFVHRDLAARNILINSNLVCKVSDFG----LSRVLEDDPEAAYTTRGGKI-- 212
Query: 211 APEIANGLPEISGYK-----VDIWSSGVTL 235
I PE Y+ D+WS G+ L
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGY 146
E ++ L H ++ L V + ++ + L+ E+ G L D L T F G
Sbjct: 52 EAEVMMKLSHPKLVQLYGVCL--EQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGM 108
Query: 147 FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS 206
L + +G+ YL +IH+D+ N L+ + +K+SDFG+ F+ DD T+S G+
Sbjct: 109 CLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR----FVLDDQYTSSTGT 164
Query: 207 --PV-FQAPEIANGLPEISGY--KVDIWSSGVTL 235
PV + +PE+ + S Y K D+WS GV +
Sbjct: 165 KFPVKWASPEVFS----FSRYSSKSDVWSFGVLM 194
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
RE+++L ++G F +D + + + ME+ GG D + + P
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKK-AGRIPEQILGKV 109
Query: 147 FLQLLDGLEYLHSQ-GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
+ ++ GL YL + I+H+D+KP N+L+ G +K+ DFGV+ L D + G
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVG 165
Query: 206 SPVFQAPEIANGLPEISGYKV--DIWSSGVTL 235
+ + +PE G + Y V DIWS G++L
Sbjct: 166 TRSYMSPERLQG----THYSVQSDIWSMGLSL 193
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N+I L D+ + + L+ E+ L Y+ + Y ++L L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH 148
Query: 159 SQGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
S GI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE----FYHPGQEYNVRVASRYFKGPELLV 204
Query: 217 GLPEISGYKVDIWSSGVTL 235
++ Y +D+WS G L
Sbjct: 205 DY-QMYDYSLDMWSLGCML 222
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGY 146
E ++ L H ++ L V + ++ + L+ E+ G L D L T F G
Sbjct: 50 EAEVMMKLSHPKLVQLYGVCL--EQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGM 106
Query: 147 FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS 206
L + +G+ YL +IH+D+ N L+ + +K+SDFG+ F+ DD T+S G+
Sbjct: 107 CLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR----FVLDDQYTSSTGT 162
Query: 207 --PV-FQAPEIANGLPEISGY--KVDIWSSGVTL 235
PV + +PE+ + S Y K D+WS GV +
Sbjct: 163 KFPVKWASPEVFS----FSRYSSKSDVWSFGVLM 192
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
RE+++L ++G F +D + + + ME+ GG D + + P
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKK-AGRIPEQILGKV 109
Query: 147 FLQLLDGLEYLHSQ-GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
+ ++ GL YL + I+H+D+KP N+L+ G +K+ DFGV+ L D + G
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVG 165
Query: 206 SPVFQAPEIANGLPEISGYKV--DIWSSGVTL 235
+ + +PE G + Y V DIWS G++L
Sbjct: 166 TRSYMSPERLQG----THYSVQSDIWSMGLSL 193
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 45 LGEGSYGKV-----KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
LG+GS+G V ++++ E R AVK + R I E ++K +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR---ERIEFLNEASVMKGFTCHH 80
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFPIWQAH-GYFLQL 150
V+ L+ V K Q ++ME G L+ ++ P + P Q ++
Sbjct: 81 VVRLLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG-SPV- 208
DG+ YL+++ +H+D+ N ++ D T+KI DFG+ D++ D +G PV
Sbjct: 139 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVR 196
Query: 209 FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+ APE + +G+ S D+WS GV L
Sbjct: 197 WMAPESLKDGVFTTSS---DMWSFGVVL 221
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 99 NVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
N+I L D+ + + L+ E+ L Y+ + Y ++L L+Y H
Sbjct: 98 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH 153
Query: 159 SQGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHD-DTITTSQGSPVFQAPEIAN 216
S GI+H+D+KP N+++ + L++ D+G+AE F H S F+ PE+
Sbjct: 154 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE----FYHPGQEYNVRVASRYFKGPELLV 209
Query: 217 GLPEISGYKVDIWSSGVTL 235
++ Y +D+WS G L
Sbjct: 210 DY-QMYDYSLDMWSLGCML 227
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
RE+++L ++G F +D + + + ME+ GG D + + P
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKK-AGRIPEQILGKV 109
Query: 147 FLQLLDGLEYLHSQ-GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
+ ++ GL YL + I+H+D+KP N+L+ G +K+ DFGV+ L D + G
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVG 165
Query: 206 SPVFQAPEIANGLPEISGYKV--DIWSSGVTL 235
+ + +PE G + Y V DIWS G++L
Sbjct: 166 TRSYMSPERLQG----THYSVQSDIWSMGLSL 193
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
RE+++L ++G F +D + + + ME+ GG D + + P
Sbjct: 115 RELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKK-AGRIPEQILGKV 171
Query: 147 FLQLLDGLEYLHSQ-GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
+ ++ GL YL + I+H+D+KP N+L+ G +K+ DFGV+ L D + G
Sbjct: 172 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVG 227
Query: 206 SPVFQAPEIANGLPEISGYKV--DIWSSGVTL 235
+ + +PE G + Y V DIWS G++L
Sbjct: 228 TRSYMSPERLQG----THYSVQSDIWSMGLSL 255
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 29/205 (14%)
Query: 44 LLGEGSYGKV---KEMLDSETLCRRAVKIFK---KKKLQRIPNGEINVDREIRLLKMLQH 97
++G G +G+V + L S+ A+K K +K +R GE ++ + H
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI------MGQFDH 76
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N+I L V K + + ++ EY G D +F + Q G + G++YL
Sbjct: 77 PNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD--TITTSQGSPVFQAPEIA 215
G +H+D+ N+L+ + K+SDFG L L DD T++G + I
Sbjct: 135 SDMGYVHRDLAARNILINSNLVCKVSDFG----LSRVLEDDPEAAYTTRGGKI----PIR 186
Query: 216 NGLPEISGYK-----VDIWSSGVTL 235
PE Y+ D+WS G+ L
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVL 211
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGY 146
E ++ L H ++ L V + ++ + L+ E+ G L D L T F G
Sbjct: 55 EAEVMMKLSHPKLVQLYGVCL--EQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGM 111
Query: 147 FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS 206
L + +G+ YL +IH+D+ N L+ + +K+SDFG+ F+ DD T+S G+
Sbjct: 112 CLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR----FVLDDQYTSSTGT 167
Query: 207 --PV-FQAPEIANGLPEISGY--KVDIWSSGVTL 235
PV + +PE+ + S Y K D+WS GV +
Sbjct: 168 KFPVKWASPEVFS----FSRYSSKSDVWSFGVLM 197
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 45 LGEGSYGKV-----KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
LG+GS+G V ++++ E R AVK + R I E ++K +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR---ERIEFLNEASVMKGFTCHH 81
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFPIWQAH-GYFLQL 150
V+ L+ V K Q ++ME G L+ ++ P + P Q ++
Sbjct: 82 VVRLLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG-SPV- 208
DG+ YL+++ +H+D+ N ++ D T+KI DFG+ D++ D +G PV
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVR 197
Query: 209 FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+ APE + +G+ S D+WS GV L
Sbjct: 198 WMAPESLKDGVFTTSS---DMWSFGVVL 222
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 20/198 (10%)
Query: 45 LGEGSYGKV--KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIG 102
+G GS+G V E S+ AVKI ++ E RE+ ++K L+H N++
Sbjct: 45 IGAGSFGTVHRAEWHGSDV----AVKILMEQDFHAERVNEF--LREVAIMKRLRHPNIVL 98
Query: 103 LVDVFVNDKKQKMYLIMEY-CVGGLQDML-DSTPYKKFPIWQAHGYFLQLLDGLEYLHSQ 160
+ + + ++ EY G L +L S ++ + + G+ YLH++
Sbjct: 99 FMGAVT--QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 161 G--IIHKDIKPGNLLLTLDGTLKISDFGVAE-SLDMFLHDDTITTSQGSPVFQAPEIANG 217
I+H+++K NLL+ T+K+ DFG++ FL + ++ G+P + APE+
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL---SSKSAAGTPEWMAPEVLRD 213
Query: 218 LPEISGYKVDIWSSGVTL 235
P S K D++S GV L
Sbjct: 214 EP--SNEKSDVYSFGVIL 229
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 29/205 (14%)
Query: 44 LLGEGSYGKV---KEMLDSETLCRRAVKIFK---KKKLQRIPNGEINVDREIRLLKMLQH 97
++G G +G+V + L S+ A+K K +K +R GE ++ + H
Sbjct: 40 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI------MGQFDH 93
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N+I L V K + + ++ EY G D +F + Q G + G++YL
Sbjct: 94 PNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 151
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD--TITTSQGSPVFQAPEIA 215
G +H+D+ N+L+ + K+SDFG L L DD T++G + I
Sbjct: 152 SDMGYVHRDLAARNILINSNLVCKVSDFG----LSRVLEDDPEAAYTTRGGKI----PIR 203
Query: 216 NGLPEISGYK-----VDIWSSGVTL 235
PE Y+ D+WS G+ L
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVL 228
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G +G+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 14 TMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 68
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I E+ G L D L ++ Q+ +EYL
Sbjct: 69 LVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFG----LSRLMTGDTXTAHAGAKFPIKWTAPESL 182
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 183 AYNKFSI---KSDVWAFGVLL 200
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVD---REIRLLKMLQ 96
M LG G YG+V E + + AVK K+ ++ V+ +E ++K ++
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--------VEEFLKEAAVMKEIK 274
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
H N++ L+ V ++ Y+I E+ G L D L ++ Q+ +E
Sbjct: 275 HPNLVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 332
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAP 212
YL + IH+++ N L+ + +K++DFG L + DT T G+ P+ + AP
Sbjct: 333 YLEKKNFIHRNLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAP 388
Query: 213 E-IANGLPEISGYKVDIWSSGVTL 235
E +A I K D+W+ GV L
Sbjct: 389 ESLAYNKFSI---KSDVWAFGVLL 409
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 57/264 (21%)
Query: 6 DEVDGDMISIFHRVDSDQVIYDNKTIKVKMIGKYVMGDLLGEGSYGKVKE-----MLDSE 60
+E++G+ + +D Q+ YD+K + + G LG G++GKV E ++ S+
Sbjct: 20 EEINGNN---YVYIDPTQLPYDHKWEFPR--NRLSFGKTLGAGAFGKVVEATAYGLIKSD 74
Query: 61 TLCRRAVKIFKKKKLQRIPNGEIN----VDREIRLLKML-QHRNVIGLVDVFVNDKKQKM 115
AVK+ K P+ + + E+++L L H N++ L+
Sbjct: 75 AAMTVAVKMLK-------PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT-- 125
Query: 116 YLIMEYCVGGLQDMLDSTPYKK-------------------FPIWQAHGYFLQLLDGLEY 156
+I EYC G D+L+ K+ + + Q+ G+ +
Sbjct: 126 LVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAF 183
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS---PV-FQAP 212
L S+ IH+D+ N+LLT KI DFG+A + +D+ +G+ PV + AP
Sbjct: 184 LASKNCIHRDLAARNILLTHGRITKICDFGLARHIK----NDSNYVVKGNARLPVKWMAP 239
Query: 213 E-IANGLPEISGYKVDIWSSGVTL 235
E I N + ++ D+WS G+ L
Sbjct: 240 ESIFNC---VYTFESDVWSYGIFL 260
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 87 REIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
RE+++L ++G F +D + + + ME+ GG D + + P
Sbjct: 56 RELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKK-AGRIPEQILGKV 112
Query: 147 FLQLLDGLEYLHSQ-GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
+ ++ GL YL + I+H+D+KP N+L+ G +K+ DFGV+ L D+ G
Sbjct: 113 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DEMANEFVG 168
Query: 206 SPVFQAPEIANGLPEISGYKV--DIWSSGVTL 235
+ + +PE G + Y V DIWS G++L
Sbjct: 169 TRSYMSPERLQG----THYSVQSDIWSMGLSL 196
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFK---KKKLQRIPNGEINVDREIRLL 92
I K V GE G++K L S+ A+K K +K +R GE ++ +
Sbjct: 49 IDKVVGAGEFGEVCSGRLK--LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI------M 100
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLD 152
H N+I L V K + + ++ EY G D +F + Q G +
Sbjct: 101 GQFDHPNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD--TITTSQGSPVFQ 210
G++YL G +H+D+ N+L+ + K+SDFG L L DD T++G +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG----LSRVLEDDPEAAYTTRGGKI-- 212
Query: 211 APEIANGLPEISGYK-----VDIWSSGVTL 235
I PE Y+ D+WS G+ L
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYF 147
E ++ H NVI L V K + +I E+ G D +F + Q G
Sbjct: 84 EASIMGQFDHPNVIHLEGVVT--KSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML 141
Query: 148 LQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSP 207
+ G++YL +H+D+ N+L+ + K+SDFG L FL DDT + S
Sbjct: 142 RGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFG----LSRFLEDDTSDPTYTSA 197
Query: 208 VFQAPEIANGLPEISGYK-----VDIWSSGVTL 235
+ I PE Y+ D+WS G+ +
Sbjct: 198 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVM 230
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGY 146
E ++ L H ++ L V + ++ + L+ E+ G L D L T F G
Sbjct: 53 EAEVMMKLSHPKLVQLYGVCL--EQAPICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGM 109
Query: 147 FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS 206
L + +G+ YL +IH+D+ N L+ + +K+SDFG+ F+ DD T+S G+
Sbjct: 110 CLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR----FVLDDQYTSSTGT 165
Query: 207 --PV-FQAPEIANGLPEISGY--KVDIWSSGVTL 235
PV + +PE+ + S Y K D+WS GV +
Sbjct: 166 KFPVKWASPEVFS----FSRYSSKSDVWSFGVLM 195
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFK---KKKLQRIPNGEINVDREIRLL 92
I K V GE G++K L S+ A+K K +K +R GE ++ +
Sbjct: 47 IDKVVGAGEFGEVCSGRLK--LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI------M 98
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLD 152
H N+I L V K + + ++ EY G D +F + Q G +
Sbjct: 99 GQFDHPNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 156
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD--TITTSQGSPVFQ 210
G++YL G +H+D+ N+L+ + K+SDFG L L DD T++G +
Sbjct: 157 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG----LSRVLEDDPEAAYTTRGGKI-- 210
Query: 211 APEIANGLPEISGYK-----VDIWSSGVTL 235
I PE Y+ D+WS G+ L
Sbjct: 211 --PIRWTSPEAIAYRKFTSASDVWSYGIVL 238
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 162 IIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEI 221
IIH+DIKP N+LL G +K+ DFG++ L + T G + APE +
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQL---VDSIAKTRDAGCRPYMAPERIDPSASR 203
Query: 222 SGYKV--DIWSSGVTL 235
GY V D+WS G+TL
Sbjct: 204 QGYDVRSDVWSLGITL 219
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 29/205 (14%)
Query: 44 LLGEGSYGKV---KEMLDSETLCRRAVKIFK---KKKLQRIPNGEINVDREIRLLKMLQH 97
++G G +G+V + L S+ A+K K +K +R GE ++ + H
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI------MGQFDH 105
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N+I L V K + + ++ EY G D +F + Q G + G++YL
Sbjct: 106 PNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD--TITTSQGSPVFQAPEIA 215
G +H+D+ N+L+ + K+SDFG L L DD T++G + I
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFG----LSRVLEDDPEAAYTTRGGKI----PIR 215
Query: 216 NGLPEISGYK-----VDIWSSGVTL 235
PE Y+ D+WS G+ L
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVL 240
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 29/205 (14%)
Query: 44 LLGEGSYGKV---KEMLDSETLCRRAVKIFK---KKKLQRIPNGEINVDREIRLLKMLQH 97
++G G +G+V + L S+ A+K K +K +R GE ++ + H
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI------MGQFDH 105
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N+I L V K + + ++ EY G D +F + Q G + G++YL
Sbjct: 106 PNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD--TITTSQGSPVFQAPEIA 215
G +H+D+ N+L+ + K+SDFG L L DD T++G + I
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFG----LSRVLEDDPEAAYTTRGGKI----PIR 215
Query: 216 NGLPEISGYK-----VDIWSSGVTL 235
PE Y+ D+WS G+ L
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVL 240
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 29/205 (14%)
Query: 44 LLGEGSYGKV---KEMLDSETLCRRAVKIFK---KKKLQRIPNGEINVDREIRLLKMLQH 97
++G G +G+V + L S+ A+K K +K +R GE ++ + H
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI------MGQFDH 105
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N+I L V K + + ++ EY G D +F + Q G + G++YL
Sbjct: 106 PNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD--TITTSQGSPVFQAPEIA 215
G +H+D+ N+L+ + K+SDFG L L DD T++G + I
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFG----LSRVLEDDPEAAYTTRGGKI----PIR 215
Query: 216 NGLPEISGYK-----VDIWSSGVTL 235
PE Y+ D+WS G+ L
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVL 240
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 57/264 (21%)
Query: 6 DEVDGDMISIFHRVDSDQVIYDNKTIKVKMIGKYVMGDLLGEGSYGKVKE-----MLDSE 60
+E++G+ + +D Q+ YD+K + + G LG G++GKV E ++ S+
Sbjct: 15 EEINGNN---YVYIDPTQLPYDHKWEFPR--NRLSFGKTLGAGAFGKVVEATAYGLIKSD 69
Query: 61 TLCRRAVKIFKKKKLQRIPNGEIN----VDREIRLLKML-QHRNVIGLVDVFVNDKKQKM 115
AVK+ K P+ + + E+++L L H N++ L+
Sbjct: 70 AAMTVAVKMLK-------PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT-- 120
Query: 116 YLIMEYCVGGLQDMLDSTPYKK-------------------FPIWQAHGYFLQLLDGLEY 156
+I EYC G D+L+ K+ + + Q+ G+ +
Sbjct: 121 LVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAF 178
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS---PV-FQAP 212
L S+ IH+D+ N+LLT KI DFG+A + +D+ +G+ PV + AP
Sbjct: 179 LASKNCIHRDLAARNILLTHGRITKICDFGLARDIK----NDSNYVVKGNARLPVKWMAP 234
Query: 213 E-IANGLPEISGYKVDIWSSGVTL 235
E I N + ++ D+WS G+ L
Sbjct: 235 ESIFNC---VYTFESDVWSYGIFL 255
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 45 LGEGSYGKV-----KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
LG+GS+G V ++++ E R AVK + R I E ++K +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR---ERIEFLNEASVMKGFTCHH 78
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFPIWQAH-GYFLQL 150
V+ L+ V K Q ++ME G L+ ++ P + P Q ++
Sbjct: 79 VVRLLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 136
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG-SPV- 208
DG+ YL+++ +H+D+ N ++ D T+KI DFG+ D+ D +G PV
Sbjct: 137 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVR 194
Query: 209 FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+ APE + +G+ S D+WS GV L
Sbjct: 195 WMAPESLKDGVFTTSS---DMWSFGVVL 219
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 45 LGEGSYGKV-----KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
LG+GS+G V ++++ E R AVK + R I E ++K +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR---ERIEFLNEASVMKGFTCHH 81
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFPIWQAH-GYFLQL 150
V+ L+ V K Q ++ME G L+ ++ P + P Q ++
Sbjct: 82 VVRLLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG-SPV- 208
DG+ YL+++ +H+D+ N ++ D T+KI DFG+ D+ D +G PV
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVR 197
Query: 209 FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+ APE + +G+ S D+WS GV L
Sbjct: 198 WMAPESLKDGVFTTSS---DMWSFGVVL 222
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 57/264 (21%)
Query: 6 DEVDGDMISIFHRVDSDQVIYDNKTIKVKMIGKYVMGDLLGEGSYGKVKE-----MLDSE 60
+E++G+ + +D Q+ YD+K + + G LG G++GKV E ++ S+
Sbjct: 20 EEINGNN---YVYIDPTQLPYDHKWEFPR--NRLSFGKTLGAGAFGKVVEATAYGLIKSD 74
Query: 61 TLCRRAVKIFKKKKLQRIPNGEIN----VDREIRLLKML-QHRNVIGLVDVFVNDKKQKM 115
AVK+ K P+ + + E+++L L H N++ L+
Sbjct: 75 AAMTVAVKMLK-------PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT-- 125
Query: 116 YLIMEYCVGGLQDMLDSTPYKK-------------------FPIWQAHGYFLQLLDGLEY 156
+I EYC G D+L+ K+ + + Q+ G+ +
Sbjct: 126 LVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAF 183
Query: 157 LHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS---PV-FQAP 212
L S+ IH+D+ N+LLT KI DFG+A + +D+ +G+ PV + AP
Sbjct: 184 LASKNCIHRDLAARNILLTHGRITKICDFGLARDIK----NDSNYVVKGNARLPVKWMAP 239
Query: 213 E-IANGLPEISGYKVDIWSSGVTL 235
E I N + ++ D+WS G+ L
Sbjct: 240 ESIFNC---VYTFESDVWSYGIFL 260
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 45 LGEGSYGKV-----KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
LG+GS+G V ++++ E R AVK + R I E ++K +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR---ERIEFLNEASVMKGFTCHH 81
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFPIWQAH-GYFLQL 150
V+ L+ V K Q ++ME G L+ ++ P + P Q ++
Sbjct: 82 VVRLLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG-SPV- 208
DG+ YL+++ +H+D+ N ++ D T+KI DFG+ D+ D +G PV
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVR 197
Query: 209 FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+ APE + +G+ S D+WS GV L
Sbjct: 198 WMAPESLKDGVFTTSS---DMWSFGVVL 222
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGT-LKISDFGVAESLDMFLHD-DTITTS 203
Y ++L L+Y HS GI+H+D+KP N+++ + L++ D+G+AE F H
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE----FYHPGQEYNVR 191
Query: 204 QGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
S F+ PE+ ++ Y +D+WS G L
Sbjct: 192 VASRYFKGPELLVDY-QMYDYSLDMWSLGCML 222
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVD---REIRLLKMLQ 96
M LG G YG+V E + + AVK K+ ++ V+ +E ++K ++
Sbjct: 262 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--------VEEFLKEAAVMKEIK 313
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
H N++ L+ V ++ Y+I E+ G L D L ++ Q+ +E
Sbjct: 314 HPNLVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 371
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAP 212
YL + IH+++ N L+ + +K++DFG L + DT T G+ P+ + AP
Sbjct: 372 YLEKKNFIHRNLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAP 427
Query: 213 E-IANGLPEISGYKVDIWSSGVTL 235
E +A I K D+W+ GV L
Sbjct: 428 ESLAYNKFSI---KSDVWAFGVLL 448
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V E + + AVK K+ ++ +E ++K ++H N
Sbjct: 220 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 274
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V ++ Y+I E+ G L D L ++ Q+ +EYL
Sbjct: 275 LVQLLGVCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 332
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+++ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 333 KKNFIHRNLAARNCLVGENHLVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAPESL 388
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 389 AYNKFSI---KSDVWAFGVLL 406
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 54/251 (21%)
Query: 19 VDSDQVIYDNKTIKVKMIGKYVMGDLLGEGSYGKVKE-----MLDSETLCRRAVKIFKKK 73
+D Q+ YD+K + + G LG G++GKV E ++ S+ AVK+ K
Sbjct: 23 IDPTQLPYDHKWEFPR--NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-- 78
Query: 74 KLQRIPNGEIN----VDREIRLLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQD 128
P+ + + E+++L L H N++ L+ +I EYC G D
Sbjct: 79 -----PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT--LVITEYCCYG--D 129
Query: 129 MLDSTPYKK-------------------FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKP 169
+L+ K+ + + Q+ G+ +L S+ IH+D+
Sbjct: 130 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAA 189
Query: 170 GNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS---PV-FQAPE-IANGLPEISGY 224
N+LLT KI DFG+A + +D+ +G+ PV + APE I N + +
Sbjct: 190 RNILLTHGRITKICDFGLARDIK----NDSNYVVKGNARLPVKWMAPESIFNC---VYTF 242
Query: 225 KVDIWSSGVTL 235
+ D+WS G+ L
Sbjct: 243 ESDVWSYGIFL 253
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 54/251 (21%)
Query: 19 VDSDQVIYDNKTIKVKMIGKYVMGDLLGEGSYGKVKE-----MLDSETLCRRAVKIFKKK 73
+D Q+ YD+K + + G LG G++GKV E ++ S+ AVK+ K
Sbjct: 7 IDPTQLPYDHKWEFPR--NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-- 62
Query: 74 KLQRIPNGEIN----VDREIRLLKML-QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQD 128
P+ + + E+++L L H N++ L+ +I EYC G D
Sbjct: 63 -----PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT--LVITEYCCYG--D 113
Query: 129 MLDSTPYKK-------------------FPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKP 169
+L+ K+ + + Q+ G+ +L S+ IH+D+
Sbjct: 114 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAA 173
Query: 170 GNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS---PV-FQAPE-IANGLPEISGY 224
N+LLT KI DFG+A + +D+ +G+ PV + APE I N + +
Sbjct: 174 RNILLTHGRITKICDFGLARDIK----NDSNYVVKGNARLPVKWMAPESIFNC---VYTF 226
Query: 225 KVDIWSSGVTL 235
+ D+WS G+ L
Sbjct: 227 ESDVWSYGIFL 237
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 29/205 (14%)
Query: 44 LLGEGSYGKV---KEMLDSETLCRRAVKIFK---KKKLQRIPNGEINVDREIRLLKMLQH 97
++G G +G+V + L S+ A+K K +K +R GE ++ + H
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI------MGQFDH 105
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N+I L V K + + ++ EY G D +F + Q G + G++YL
Sbjct: 106 PNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD--TITTSQGSPVFQAPEIA 215
G +H+D+ N+L+ + K+SDFG L L DD T++G + I
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFG----LGRVLEDDPEAAYTTRGGKI----PIR 215
Query: 216 NGLPEISGYK-----VDIWSSGVTL 235
PE Y+ D+WS G+ L
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVL 240
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 13/152 (8%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGY 146
E +++K L+H ++ L V ++ +Y++ EY G L D L + +
Sbjct: 54 EAQIMKKLKHDKLVQLYAVV---SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDM 110
Query: 147 FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS 206
Q+ G+ Y+ IH+D++ N+L+ KI+DFG+A + D+ T QG+
Sbjct: 111 AAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLAR----LIEDNEXTARQGA 166
Query: 207 --PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
P+ + APE A L K D+WS G+ L
Sbjct: 167 KFPIKWTAPEAA--LYGRFTIKSDVWSFGILL 196
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 33/211 (15%)
Query: 45 LGEGSYGKV-----KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
LG+GS+G V ++++ E R AVK + R I E ++K +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR---ERIEFLNEASVMKGFTCHH 81
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFPIWQAH-GYFLQL 150
V+ L+ V K Q ++ME G L+ ++ P + P Q ++
Sbjct: 82 VVRLLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS---- 206
DG+ YL+++ +H+D+ N ++ D T+KI DFG+ D++ +T +G
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIY---ETAYYRKGGKGLL 194
Query: 207 PV-FQAPE-IANGLPEISGYKVDIWSSGVTL 235
PV + APE + +G+ S D+WS GV L
Sbjct: 195 PVRWMAPESLKDGVFTTSS---DMWSFGVVL 222
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 30/219 (13%)
Query: 38 KYVMGDLLGEGSYGKVKEMLD-SETLCRRAVKIFKK-KKLQRIPNGEINVDREIRLLKML 95
+Y + LGEG++GKV E LD + + A+KI + K + EINV ++I+ K
Sbjct: 52 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKE-KDK 110
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
+++ + L+ + N M + E + L ++ +P+ QL L
Sbjct: 111 ENKFLCVLMSDWFNFHGH-MCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALR 169
Query: 156 YLHSQGIIHKDIKPGNLLL------TL-------------DGTLKISDFGVAESLDMFLH 196
+LH + H D+KP N+L TL + +++++DFG A + D H
Sbjct: 170 FLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA-TFDHEHH 228
Query: 197 DDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T P E+ P D+WS G L
Sbjct: 229 TTIVATRHYRPPEVILELGWAQP------CDVWSIGCIL 261
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 38 KYVMGDLLGEGSYGKVKEM-LDSE--TLCRRAVKIFKKKKLQRIPNGEIN-VDREIRLLK 93
++ +G +LG+G +G V+E L E + + AVK+ K I + +I RE +K
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADI---IASSDIEEFLREAACMK 80
Query: 94 MLQHRNVIGLVDVFVNDKKQKMY----LIMEYCVGG------LQDMLDSTPYKKFPIWQA 143
H +V LV V + + + +I+ + G L + P+ P+
Sbjct: 81 EFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN-LPLQTL 139
Query: 144 HGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTS 203
+ + + G+EYL S+ IH+D+ N +L D T+ ++DFG++ + + S
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
Query: 204 QGSPVFQAPE-IANGLPEISGYKVDIWSSGVTL 235
+ + A E +A+ L + D+W+ GVT+
Sbjct: 200 KLPVKWLALESLADNLYTVHS---DVWAFGVTM 229
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 30/219 (13%)
Query: 38 KYVMGDLLGEGSYGKVKEMLD-SETLCRRAVKIFKK-KKLQRIPNGEINVDREIRLLKML 95
+Y + LGEG++GKV E LD + + A+KI + K + EINV ++I+ K
Sbjct: 29 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKE-KDK 87
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
+++ + L+ + N M + E + L ++ +P+ QL L
Sbjct: 88 ENKFLCVLMSDWFNFHGH-MCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALR 146
Query: 156 YLHSQGIIHKDIKPGNLLL------TL-------------DGTLKISDFGVAESLDMFLH 196
+LH + H D+KP N+L TL + +++++DFG A + D H
Sbjct: 147 FLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA-TFDHEHH 205
Query: 197 DDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T P E+ P D+WS G L
Sbjct: 206 TTIVATRHYRPPEVILELGWAQP------CDVWSIGCIL 238
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 30/219 (13%)
Query: 38 KYVMGDLLGEGSYGKVKEMLD-SETLCRRAVKIFKK-KKLQRIPNGEINVDREIRLLKML 95
+Y + LGEG++GKV E LD + + A+KI + K + EINV ++I+ K
Sbjct: 20 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKE-KDK 78
Query: 96 QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
+++ + L+ + N M + E + L ++ +P+ QL L
Sbjct: 79 ENKFLCVLMSDWFNFHGH-MCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALR 137
Query: 156 YLHSQGIIHKDIKPGNLLL------TL-------------DGTLKISDFGVAESLDMFLH 196
+LH + H D+KP N+L TL + +++++DFG A + D H
Sbjct: 138 FLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA-TFDHEHH 196
Query: 197 DDTITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ T P E+ P D+WS G L
Sbjct: 197 TTIVATRHYRPPEVILELGWAQP------CDVWSIGCIL 229
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 45 LGEGSYGKV-----KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
LG+GS+G V ++++ E R AVK + R I E ++K +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR---ERIEFLNEASVMKGFTCHH 82
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFPIWQAH-GYFLQL 150
V+ L+ V K Q ++ME G L+ ++ P + P Q ++
Sbjct: 83 VVRLLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 140
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG-SPV- 208
DG+ YL+++ +H+++ N ++ D T+KI DFG+ D++ D +G PV
Sbjct: 141 ADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVR 198
Query: 209 FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+ APE + +G+ S D+WS GV L
Sbjct: 199 WMAPESLKDGVFTTSS---DMWSFGVVL 223
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 54/232 (23%)
Query: 37 GKYVMGDLLGEGSYGKVKEMLDSETLCRR-AVKIFKKKKLQRIPNGEINVDREIRL---- 91
+Y + D LGEG++GKV E +D + R AVKI K NVDR
Sbjct: 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK------------NVDRYCEAARSE 61
Query: 92 LKMLQHRNVIGLVDVFVN-------DKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAH 144
+++L+H N F + + ++ E D + + F +
Sbjct: 62 IQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIR 121
Query: 145 GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLT-------------------LDGTLKISDF 185
Q+ + +LHS + H D+KP N+L ++ +K+ DF
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF 181
Query: 186 GVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISGYK--VDIWSSGVTL 235
G A D H T+ +++ ++APE+ L G+ D+WS G L
Sbjct: 182 GSATYDDE--HHSTLVSTRH---YRAPEVILAL----GWSQPCDVWSIGCIL 224
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 45 LGEGSYGKV-----KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
LG+GS+G V ++++ E R AVK + R I E ++K +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR---ERIEFLNEASVMKGFTCHH 81
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFPIWQAH-GYFLQL 150
V+ L+ V K Q ++ME G L+ ++ P + P Q ++
Sbjct: 82 VVRLLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 151 LDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG-SPV- 208
DG+ YL+++ +H+++ N ++ D T+KI DFG+ D++ D +G PV
Sbjct: 140 ADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVR 197
Query: 209 FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+ APE + +G+ S D+WS GV L
Sbjct: 198 WMAPESLKDGVFTTSS---DMWSFGVVL 222
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 145 GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQ 204
Y Q+ G+E+L S+ IH+D+ N+LL+ + +KI DFG+A D++ + D +
Sbjct: 203 SYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLAR--DIYKNPDYVRKGD 260
Query: 205 GS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
P+ + APE + +I K D+WS GV L
Sbjct: 261 TRLPLKWMAPE--SIFDKIYSTKSDVWSYGVLL 291
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
M LG G YG+V + + AVK K+ ++ +E ++K ++H N
Sbjct: 35 TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-----EFLKEAAVMKEIKHPN 89
Query: 100 VIGLVDVFVNDKKQKMYLIMEYC-VGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLH 158
++ L+ V + Y++ EY G L D L ++ Q+ +EYL
Sbjct: 90 LVQLLGVCTLEPP--FYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE 147
Query: 159 SQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPE-I 214
+ IH+D+ N L+ + +K++DFG L + DT T G+ P+ + APE +
Sbjct: 148 KKNFIHRDLAARNCLVGENHVVKVADFG----LSRLMTGDTYTAHAGAKFPIKWTAPESL 203
Query: 215 ANGLPEISGYKVDIWSSGVTL 235
A I K D+W+ GV L
Sbjct: 204 AYNTFSI---KSDVWAFGVLL 221
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 40 VMGDLLGEGSYGKVKE-MLDSETLCRRAVKIFKKKKLQRIPNGEIN-VDREIRLLKMLQH 97
++G +LGEG +G V E L E V + K KL EI E +K H
Sbjct: 37 ILGKILGEGEFGSVMEGNLKQEDGTSLKVAV-KTMKLDNSSQREIEEFLSEAACMKDFSH 95
Query: 98 RNVIGLVDVFVNDKKQ---KMYLIMEYCVGG------LQDMLDSTPYKKFPIWQAHGYFL 148
NVI L+ V + Q K +I+ + G L L++ P K P+ + +
Sbjct: 96 PNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGP-KHIPLQTLLKFMV 154
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
+ G+EYL ++ +H+D+ N +L D T+ ++DFG+++ + + D
Sbjct: 155 DIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKI--YSGDYYRQGRIAKMP 212
Query: 209 FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ I + + K D+W+ GVT+
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTM 239
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 34/218 (15%)
Query: 41 MGDLLGEGSYGKVKEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
G LG G++GKV E + + + AVK+ K ++ E++++ L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHL 106
Query: 96 -QHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFPIWQAHG- 145
QH N++ L+ + + +I EYC G +L++ P F I +
Sbjct: 107 GQHENIVNLLGACTHGGP--VLVITEYCCYGDLLNFLRRKSRVLETDP--AFAIANSTAS 162
Query: 146 ------YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
+ Q+ G+ +L S+ IH+D+ N+LLT KI DFG+A D+ +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMNDSNY 220
Query: 200 ITTSQGS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
I PV + APE + + + D+WS G+ L
Sbjct: 221 IVKGNARLPVKWMAPE--SIFDCVYTVQSDVWSYGILL 256
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 26/212 (12%)
Query: 41 MGDLLGEGSYGKVKEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
G LG G++GKV E + + + AVK+ K ++ E++++ L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHL 106
Query: 96 -QHRNVIGLVDVFVNDKKQKMYLIMEYCVGG---------LQDMLDSTPYKKFPIWQAHG 145
QH N++ L+ + + +I EYC G + LD + +
Sbjct: 107 GQHENIVNLLGACTHGGP--VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 164
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
+ Q+ G+ +L S+ IH+D+ N+LLT KI DFG+A D+ + I
Sbjct: 165 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMNDSNYIVKGNA 222
Query: 206 S-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
PV + APE + + + D+WS G+ L
Sbjct: 223 RLPVKWMAPE--SIFDCVYTVQSDVWSYGILL 252
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 38 KYVMGDLLGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
K M LG+GS+G V E ++ E R A+K + R I E ++
Sbjct: 19 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR---ERIEFLNEASVM 75
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFP----I 140
K +V+ L+ V + Q +IME G L+ +++ P P +
Sbjct: 76 KEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 141 WQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTI 200
Q G ++ DG+ YL++ +H+D+ N ++ D T+KI DFG+ D++ D
Sbjct: 134 IQMAG---EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR 188
Query: 201 TTSQG-SPV-FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+G PV + +PE + +G+ + Y D+WS GV L
Sbjct: 189 KGGKGLLPVRWMSPESLKDGV--FTTYS-DVWSFGVVL 223
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 13/153 (8%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYF 147
E ++ H N+I L V K + + ++ EY G D +F + Q G
Sbjct: 73 EASIMGQFDHPNIIHLEGVVT--KSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGML 130
Query: 148 LQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD--TITTSQG 205
+ G++YL G +H+D+ N+L+ + K+SDFG L L DD T++G
Sbjct: 131 RGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG----LSRVLEDDPEAAYTTRG 186
Query: 206 SPV---FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ + APE A + + D+WS G+ +
Sbjct: 187 GKIPIRWTAPE-AIAFRKFTSAS-DVWSYGIVM 217
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 38 KYVMGDLLGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
K M LG+GS+G V E ++ E R A+K + R I E ++
Sbjct: 17 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR---ERIEFLNEASVM 73
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFP----I 140
K +V+ L+ V + Q +IME G L+ +++ P P +
Sbjct: 74 KEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 131
Query: 141 WQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTI 200
Q G ++ DG+ YL++ +H+D+ N ++ D T+KI DFG+ D++ D
Sbjct: 132 IQMAG---EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR 186
Query: 201 TTSQG-SPV-FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+G PV + +PE + +G+ + Y D+WS GV L
Sbjct: 187 KGGKGLLPVRWMSPESLKDGV--FTTYS-DVWSFGVVL 221
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 36/220 (16%)
Query: 41 MGDLLGEGSYGKVKEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
G LG G++GKV E + + + AVK+ K + + + E++++ L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA---DEKEALMSELKIMSHL 106
Query: 96 -QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQ-----AHG---- 145
QH N++ L+ + + +I EYC G D+L+ K+ P + +H
Sbjct: 107 GQHENIVNLLGACTHGGP--VLVITEYCCYG--DLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 146 --------YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD 197
+ Q+ G+ +L S+ IH+D+ N+LLT KI DFG+A D+
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMNDS 220
Query: 198 DTITTSQGS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ I PV + APE + + + D+WS G+ L
Sbjct: 221 NYIVKGNARLPVKWMAPE--SIFDCVYTVQSDVWSYGILL 258
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYF 147
E ++ H NV+ L V K + +++E+ G D +F + Q G
Sbjct: 94 EASIMGQFDHPNVVHLEGVVTRGKP--VMIVIEFMENGALDAFLRKHDGQFTVIQLVGML 151
Query: 148 LQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSP 207
+ G+ YL G +H+D+ N+L+ + K+SDFG++ ++ TT P
Sbjct: 152 RGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIP 211
Query: 208 V-FQAPEIANGLPEISGYKVDIWSSGVTL 235
V + APE S D+WS G+ +
Sbjct: 212 VRWTAPEAIQYRKFTSA--SDVWSYGIVM 238
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 38 KYVMGDLLGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
K M LG+GS+G V E ++ E R A+K + R I E ++
Sbjct: 19 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR---ERIEFLNEASVM 75
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFP----I 140
K +V+ L+ V + Q +IME G L+ +++ P P +
Sbjct: 76 KEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 141 WQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTI 200
Q G ++ DG+ YL++ +H+D+ N ++ D T+KI DFG+ D++ D
Sbjct: 134 IQMAG---EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR 188
Query: 201 TTSQG-SPV-FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+G PV + +PE + +G+ + Y D+WS GV L
Sbjct: 189 KGGKGLLPVRWMSPESLKDGV--FTTYS-DVWSFGVVL 223
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 38 KYVMGDLLGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
K M LG+GS+G V E ++ E R A+K + R I E ++
Sbjct: 48 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR---ERIEFLNEASVM 104
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFP----I 140
K +V+ L+ V + Q +IME G L+ +++ P P +
Sbjct: 105 KEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 162
Query: 141 WQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTI 200
Q G ++ DG+ YL++ +H+D+ N ++ D T+KI DFG+ D++ D
Sbjct: 163 IQMAG---EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR 217
Query: 201 TTSQG-SPV-FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+G PV + +PE + +G+ + Y D+WS GV L
Sbjct: 218 KGGKGLLPVRWMSPESLKDGV--FTTYS-DVWSFGVVL 252
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 26/212 (12%)
Query: 41 MGDLLGEGSYGKVKEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
G LG G++GKV E + + + AVK+ K ++ E++++ L
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHL 98
Query: 96 -QHRNVIGLVDVFVNDKKQKMYLIMEYCVGG---------LQDMLDSTPYKKFPIWQAHG 145
QH N++ L+ + + +I EYC G + LD + +
Sbjct: 99 GQHENIVNLLGACTHGGP--VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 156
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
+ Q+ G+ +L S+ IH+D+ N+LLT KI DFG+A D+ + I
Sbjct: 157 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMNDSNYIVKGNA 214
Query: 206 S-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
PV + APE + + + D+WS G+ L
Sbjct: 215 RLPVKWMAPE--SIFDCVYTVQSDVWSYGILL 244
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 33/218 (15%)
Query: 38 KYVMGDLLGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
K M LG+GS+G V E ++ E R A+K + R I E ++
Sbjct: 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR---ERIEFLNEASVM 82
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFP----I 140
K +V+ L+ V + Q +IME G L+ +++ P P +
Sbjct: 83 KEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 140
Query: 141 WQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTI 200
Q G ++ DG+ YL++ +H+D+ N ++ D T+KI DFG+ + D++ D
Sbjct: 141 IQMAG---EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGM--TRDIYETDYYR 195
Query: 201 TTSQG-SPV-FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+G PV + +PE + +G+ + Y D+WS GV L
Sbjct: 196 KGGKGLLPVRWMSPESLKDGV--FTTYS-DVWSFGVVL 230
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 38 KYVMGDLLGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
K M LG+GS+G V E ++ E R A+K + R I E ++
Sbjct: 20 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR---ERIEFLNEASVM 76
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFP----I 140
K +V+ L+ V + Q +IME G L+ +++ P P +
Sbjct: 77 KEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 141 WQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTI 200
Q G ++ DG+ YL++ +H+D+ N ++ D T+KI DFG+ D++ D
Sbjct: 135 IQMAG---EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR 189
Query: 201 TTSQG-SPV-FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+G PV + +PE + +G+ + Y D+WS GV L
Sbjct: 190 KGGKGLLPVRWMSPESLKDGV--FTTYS-DVWSFGVVL 224
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 47/203 (23%)
Query: 43 DLLGEGSYGKV-KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVI 101
+L+G G YG V K LD + AVK+F Q N ++ I + +++H N+
Sbjct: 19 ELIGRGRYGAVYKGSLDERPV---AVKVFSFANRQNFIN-----EKNIYRVPLMEHDNIA 70
Query: 102 GLV---DVFVNDKKQKMYLIMEYCVGG---------LQDMLDSTPYKKFPIWQAHGYFLQ 149
+ + D + + L+MEY G D + S AH
Sbjct: 71 RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRL-------AHS---- 119
Query: 150 LLDGLEYLHSQ---------GIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFL----- 195
+ GL YLH++ I H+D+ N+L+ DGT ISDFG++ L
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPG 179
Query: 196 -HDDTITTSQGSPVFQAPEIANG 217
D+ + G+ + APE+ G
Sbjct: 180 EEDNAAISEVGTIRYMAPEVLEG 202
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYF 147
E ++ H NVI L V K + +I E+ G D +F + Q G
Sbjct: 58 EASIMGQFDHPNVIHLEGVVT--KSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML 115
Query: 148 LQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSP 207
+ G++YL +H+ + N+L+ + K+SDFG L FL DDT + S
Sbjct: 116 RGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFG----LSRFLEDDTSDPTYTSA 171
Query: 208 VFQAPEIANGLPEISGYK-----VDIWSSGVTL 235
+ I PE Y+ D+WS G+ +
Sbjct: 172 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVM 204
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 38 KYVMGDLLGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
K M LG+GS+G V E ++ E R A+K + R I E ++
Sbjct: 13 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR---ERIEFLNEASVM 69
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFP----I 140
K +V+ L+ V + Q +IME G L+ +++ P P +
Sbjct: 70 KEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 141 WQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTI 200
Q G ++ DG+ YL++ +H+D+ N ++ D T+KI DFG+ D++ D
Sbjct: 128 IQMAG---EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR 182
Query: 201 TTSQG-SPV-FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+G PV + +PE + +G+ + Y D+WS GV L
Sbjct: 183 KGGKGLLPVRWMSPESLKDGV--FTTYS-DVWSFGVVL 217
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 5/149 (3%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYF 147
E ++ H N+I L V + + ++ EY G D T +F I Q G
Sbjct: 100 EASIMGQFDHPNIIRLEGVVT--RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 148 LQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSP 207
+ G+ YL G +H+D+ N+L+ + K+SDFG++ L+ TT P
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIP 217
Query: 208 V-FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ + APE A S D+WS GV +
Sbjct: 218 IRWTAPE-AIAFRTFSSAS-DVWSFGVVM 244
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 90/232 (38%), Gaps = 54/232 (23%)
Query: 37 GKYVMGDLLGEGSYGKVKEMLDSETLCRR-AVKIFKKKKLQRIPNGEINVDREIRL---- 91
+Y + D LGEG++GKV E +D + R AVKI K NVDR
Sbjct: 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK------------NVDRYCEAARSE 61
Query: 92 LKMLQHRNVIGLVDVFVN-------DKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAH 144
+++L+H N F + + ++ E D + + F +
Sbjct: 62 IQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIR 121
Query: 145 GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLT-------------------LDGTLKISDF 185
Q+ + +LHS + H D+KP N+L ++ +K+ DF
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF 181
Query: 186 GVAESLDMFLHDDTITTSQGSPVFQAPEIANGLPEISGYK--VDIWSSGVTL 235
G A D H T+ + ++APE+ L G+ D+WS G L
Sbjct: 182 GSATYDDE--HHSTLVXXRH---YRAPEVILAL----GWSQPCDVWSIGCIL 224
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 43/227 (18%)
Query: 41 MGDLLGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
G +LG G++GKV + + + AVK+ K+K ++ E++++ L
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMS---ELKMMTQL 105
Query: 96 -QHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAH---------- 144
H N++ L+ +YLI EYC G D+L+ K+ +
Sbjct: 106 GSHENIVNLLGACT--LSGPIYLIFEYCCYG--DLLNYLRSKREKFSEDEIEYENQKRLE 161
Query: 145 --------------GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAES 190
+ Q+ G+E+L + +H+D+ N+L+T +KI DFG+A
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 191 LDMFLHDDTITTSQGSPV-FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+ M + + + PV + APE + G+ I K D+WS G+ L
Sbjct: 222 I-MSDSNYVVRGNARLPVKWMAPESLFEGIYTI---KSDVWSYGILL 264
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFK---KKKLQRIPNGEINVDREIRLL 92
I K V GE G++K L S+ A+K K +K +R GE ++ +
Sbjct: 49 IDKVVGAGEFGEVCSGRLK--LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI------M 100
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLD 152
H N+I L V K + + ++ E G D +F + Q G +
Sbjct: 101 GQFDHPNIIRLEGVVT--KSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD--TITTSQGSPVFQ 210
G++YL G +H+D+ N+L+ + K+SDFG L L DD T++G +
Sbjct: 159 GMKYLSDMGAVHRDLAARNILINSNLVCKVSDFG----LSRVLEDDPEAAYTTRGGKI-- 212
Query: 211 APEIANGLPEISGYK-----VDIWSSGVTL 235
I PE Y+ D+WS G+ L
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 38 KYVMGDLLGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
K M LG+GS+G V E ++ E R A+K + R I E ++
Sbjct: 16 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR---ERIEFLNEASVM 72
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFP----I 140
K +V+ L+ V + Q +IME G L+ + + P P +
Sbjct: 73 KEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 130
Query: 141 WQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTI 200
Q G ++ DG+ YL++ +H+D+ N ++ D T+KI DFG+ D++ D
Sbjct: 131 IQMAG---EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR 185
Query: 201 TTSQG-SPV-FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+G PV + +PE + +G+ + Y D+WS GV L
Sbjct: 186 KGGKGLLPVRWMSPESLKDGV--FTTYS-DVWSFGVVL 220
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML-QHRNVIGL 103
+G G +G V + + C A+K KK + E N RE+ +L QH +V+
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV--DEQNALREVYAHAVLGQHSHVVRY 74
Query: 104 VDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYK---KFPIWQAHGYFLQLLDGLEYLHS 159
+ D M + EYC GG L D + S Y+ F + LQ+ GL Y+HS
Sbjct: 75 FSAWAED--DHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGRGLRYIHS 131
Query: 160 QGIIHKDIKPGNLLLT 175
++H DIKP N+ ++
Sbjct: 132 MSLVHMDIKPSNIFIS 147
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 38 KYVMGDLLGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
K M LG+GS+G V E ++ E R A+K + R I E ++
Sbjct: 20 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR---ERIEFLNEASVM 76
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFP----I 140
K +V+ L+ V + Q +IME G L+ +++ P P +
Sbjct: 77 KEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 141 WQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTI 200
Q G ++ DG+ YL++ +H+D+ N ++ D T+KI DFG+ D+ D
Sbjct: 135 IQMAG---EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXR 189
Query: 201 TTSQG-SPV-FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+G PV + +PE + +G+ + Y D+WS GV L
Sbjct: 190 KGGKGLLPVRWMSPESLKDGV--FTTYS-DVWSFGVVL 224
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML-QHRNVIGL 103
+G G +G V + + C A+K KK + E N RE+ +L QH +V+
Sbjct: 15 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV--DEQNALREVYAHAVLGQHSHVVRY 72
Query: 104 VDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYK---KFPIWQAHGYFLQLLDGLEYLHS 159
+ D M + EYC GG L D + S Y+ F + LQ+ GL Y+HS
Sbjct: 73 FSAWAED--DHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGRGLRYIHS 129
Query: 160 QGIIHKDIKPGNLLLT 175
++H DIKP N+ ++
Sbjct: 130 MSLVHMDIKPSNIFIS 145
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 44 LLGEGSYGKV---KEMLDSETLCRRAVKIFK---KKKLQRIPNGEINVDREIRLLKMLQH 97
++G G +G+V + L S+ A+K K +K +R GE ++ + H
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI------MGQFDH 76
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYL 157
N+I L V K + + ++ E G D +F + Q G + G++YL
Sbjct: 77 PNIIRLEGVVT--KSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
Query: 158 HSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD--TITTSQGSPVFQAPEIA 215
G +H+D+ N+L+ + K+SDFG L L DD T++G + I
Sbjct: 135 SDMGYVHRDLAARNILINSNLVCKVSDFG----LSRVLEDDPEAAYTTRGGKI----PIR 186
Query: 216 NGLPEISGYK-----VDIWSSGVTL 235
PE Y+ D+WS G+ L
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVL 211
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 33/133 (24%)
Query: 128 DMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLD-GTLKISDFG 186
D+L+S ++ + Y L L L+ +H GI+H+D+KP N L + DFG
Sbjct: 109 DILNSLSFQ-----EVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFG 163
Query: 187 VAE-------SLDMFLHDDT-------------------ITTSQGSPVFQAPEIANGLPE 220
+A+ L F+ + + G+P F+APE+ P
Sbjct: 164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPN 223
Query: 221 ISGYKVDIWSSGV 233
+ +D+WS+GV
Sbjct: 224 QTT-AIDMWSAGV 235
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML-QHRNVIGL 103
+G G +G V + + C A+K KK + E N RE+ +L QH +V+
Sbjct: 19 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV--DEQNALREVYAHAVLGQHSHVVRY 76
Query: 104 VDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYK---KFPIWQAHGYFLQLLDGLEYLHS 159
+ D M + EYC GG L D + S Y+ F + LQ+ GL Y+HS
Sbjct: 77 FSAWAED--DHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGRGLRYIHS 133
Query: 160 QGIIHKDIKPGNLLLT 175
++H DIKP N+ ++
Sbjct: 134 MSLVHMDIKPSNIFIS 149
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 38 KYVMGDLLGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
K M LG+GS+G V E ++ E R A+K + R I E ++
Sbjct: 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR---ERIEFLNEASVM 82
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFP----I 140
K +V+ L+ V + Q +IME G L+ + + P P +
Sbjct: 83 KEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 140
Query: 141 WQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTI 200
Q G ++ DG+ YL++ +H+D+ N ++ D T+KI DFG+ + D++ D
Sbjct: 141 IQMAG---EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGM--TRDIYETDYYR 195
Query: 201 TTSQG-SPV-FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+G PV + +PE + +G+ + Y D+WS GV L
Sbjct: 196 KGGKGLLPVRWMSPESLKDGV--FTTYS-DVWSFGVVL 230
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML-QHRNVIGL 103
+G G +G V + + C A+K KK + E N RE+ +L QH +V+
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV--DEQNALREVYAHAVLGQHSHVVRY 74
Query: 104 VDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYK---KFPIWQAHGYFLQLLDGLEYLHS 159
+ D M + EYC GG L D + S Y+ F + LQ+ GL Y+HS
Sbjct: 75 FSAWAED--DHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGRGLRYIHS 131
Query: 160 QGIIHKDIKPGNLLLT 175
++H DIKP N+ ++
Sbjct: 132 MSLVHMDIKPSNIFIS 147
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 38 KYVMGDLLGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
K M LG+GS+G V E ++ E R A+K + R I E ++
Sbjct: 11 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR---ERIEFLNEASVM 67
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFP----I 140
K +V+ L+ V + Q +IME G L+ +++ P P +
Sbjct: 68 KEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 141 WQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTI 200
Q G ++ DG+ YL++ +H+D+ N ++ D T+KI DFG+ D+ D
Sbjct: 126 IQMAG---EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXR 180
Query: 201 TTSQG-SPV-FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+G PV + +PE + +G+ + Y D+WS GV L
Sbjct: 181 KGGKGLLPVRWMSPESLKDGV--FTTYS-DVWSFGVVL 215
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYF 147
E ++ H N+I L V K + + +I EY G D +F + Q G
Sbjct: 80 EASIMGQFDHPNIIHLEGVVT--KCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 137
Query: 148 LQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD--TITTSQG 205
+ G++YL +H+D+ N+L+ + K+SDFG++ L DD T++G
Sbjct: 138 RGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSR----VLEDDPEAAYTTRG 193
Query: 206 SPVFQAPEIANGLPEISGYK-----VDIWSSGVTL 235
+ I PE Y+ D+WS G+ +
Sbjct: 194 GKI----PIRWTAPEAIAYRKFTSASDVWSYGIVM 224
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 36 IGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFK---KKKLQRIPNGEINVDREIRLL 92
I K V GE G++K L S+ A+K K +K +R GE ++ +
Sbjct: 49 IDKVVGAGEFGEVCSGRLK--LPSKKEISVAIKTLKVGYTEKQRRDFLGEASI------M 100
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLD 152
H N+I L V K + + ++ E G D +F + Q G +
Sbjct: 101 GQFDHPNIIRLEGVVT--KSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 153 GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD--TITTSQGSPVFQ 210
G++YL G +H+D+ N+L+ + K+SDFG L L DD T++G +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG----LSRVLEDDPEAAYTTRGGKI-- 212
Query: 211 APEIANGLPEISGYK-----VDIWSSGVTL 235
I PE Y+ D+WS G+ L
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 5/149 (3%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYF 147
E ++ H N+I L V + + ++ EY G D T +F I Q G
Sbjct: 100 EASIMGQFDHPNIIRLEGVVT--RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 148 LQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSP 207
+ G+ YL G +H+D+ N+L+ + K+SDFG++ L+ TT P
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIP 217
Query: 208 V-FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ + APE A S D+WS GV +
Sbjct: 218 IRWTAPE-AIAFRTFSSAS-DVWSFGVVM 244
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 34/218 (15%)
Query: 41 MGDLLGEGSYGKVKEML-----DSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKML 95
G LG G++GKV E + + + AVK+ K ++ E++++ L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHL 106
Query: 96 -QHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFPIWQAH-- 144
QH N++ L+ + + +I EYC G +L++ P F I +
Sbjct: 107 GQHENIVNLLGACTHGGP--VLVITEYCCYGDLLNFLRRKSRVLETDP--AFAIANSTLS 162
Query: 145 -----GYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
+ Q+ G+ +L S+ IH+D+ N+LLT KI DFG+A D+ +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMNDSNY 220
Query: 200 ITTSQGS-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
I PV + APE + + + D+WS G+ L
Sbjct: 221 IVKGNARLPVKWMAPE--SIFDCVYTVQSDVWSYGILL 256
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYF 147
E ++ H N+I L V K + + +I EY G D +F + Q G
Sbjct: 65 EASIMGQFDHPNIIHLEGVVT--KCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 122
Query: 148 LQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD--TITTSQG 205
+ G++YL +H+D+ N+L+ + K+SDFG++ L DD T++G
Sbjct: 123 RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSR----VLEDDPEAAYTTRG 178
Query: 206 SPVFQAPEIANGLPEISGYK-----VDIWSSGVTL 235
+ I PE Y+ D+WS G+ +
Sbjct: 179 GKI----PIRWTAPEAIAYRKFTSASDVWSYGIVM 209
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 12/155 (7%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYF 147
E+ + K+ H N++ F+ D + ++++ + G L T + A Y
Sbjct: 76 ELHVSKLFNHPNIVPYRATFIADNE--LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI 133
Query: 148 LQ-LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS 206
LQ +L L+Y+H G +H+ +K ++L+++DG + +S G+ +L M H
Sbjct: 134 LQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDF 191
Query: 207 PVFQAPEIANGLPEI-----SGY--KVDIWSSGVT 234
P + + PE+ GY K DI+S G+T
Sbjct: 192 PKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGIT 226
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYF 147
E ++ H N+I L V K + + +I EY G D +F + Q G
Sbjct: 59 EASIMGQFDHPNIIHLEGVVT--KCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 116
Query: 148 LQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDD--TITTSQG 205
+ G++YL +H+D+ N+L+ + K+SDFG++ L DD T++G
Sbjct: 117 RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSR----VLEDDPEAAYTTRG 172
Query: 206 SPVFQAPEIANGLPEISGYK-----VDIWSSGVTL 235
+ I PE Y+ D+WS G+ +
Sbjct: 173 GKI----PIRWTAPEAIAYRKFTSASDVWSYGIVM 203
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 31/216 (14%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIP--NGEINVDREIRLLKMLQH 97
V+ LGEG++GKV + + LC KI K + N + RE LL LQH
Sbjct: 16 VLKRELGEGAFGKVF-LAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH 74
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGGLQD------------MLDSTPYKKFPIWQAHG 145
+++ V V + + ++ EY G + M + P + Q
Sbjct: 75 EHIVKFYGVCV--EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHD-DTITTSQ 204
Q+ G+ YL SQ +H+D+ N L+ + +KI DFG+ S D++ D +
Sbjct: 133 IAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGM--SRDVYSTDYYRVGGHT 190
Query: 205 GSPVFQAPEIANGLPEISGYK-----VDIWSSGVTL 235
P+ P PE Y+ D+WS GV L
Sbjct: 191 MLPIRWMP------PESIMYRKFTTESDVWSLGVVL 220
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 12/155 (7%)
Query: 88 EIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYF 147
E+ + K+ H N++ F+ D + ++++ + G L T + A Y
Sbjct: 60 ELHVSKLFNHPNIVPYRATFIADNE--LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI 117
Query: 148 LQ-LLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS 206
LQ +L L+Y+H G +H+ +K ++L+++DG + +S G+ +L M H
Sbjct: 118 LQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDF 175
Query: 207 PVFQAPEIANGLPEI-----SGY--KVDIWSSGVT 234
P + + PE+ GY K DI+S G+T
Sbjct: 176 PKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGIT 210
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 38 KYVMGDLLGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLL 92
K M LG+GS+G V E ++ E R A+K + R I E ++
Sbjct: 13 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR---ERIEFLNEASVM 69
Query: 93 KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGG--------LQDMLDSTPYKKFP----I 140
K +V+ L+ V + Q +IME G L+ +++ P P +
Sbjct: 70 KEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 141 WQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTI 200
Q G ++ DG+ YL++ +H+D+ N + D T+KI DFG+ D++ D
Sbjct: 128 IQMAG---EIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTR--DIYETDYYR 182
Query: 201 TTSQG-SPV-FQAPE-IANGLPEISGYKVDIWSSGVTL 235
+G PV + +PE + +G+ + Y D+WS GV L
Sbjct: 183 KGGKGLLPVRWMSPESLKDGV--FTTYS-DVWSFGVVL 217
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 38/216 (17%)
Query: 43 DLLGEGSYGKV------KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQ 96
D++GEG++G+V K+ L + +R +K + K R GE+ V L K+
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKR-MKEYASKDDHRDFAGELEV-----LCKLGH 84
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQD------MLDSTPYKKFPIWQAHGYFL- 148
H N+I L+ + + +YL +EY G L D +L++ P F I + L
Sbjct: 85 HPNIINLLGAC--EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP--AFAIANSTASTLS 140
Query: 149 --QLLD-------GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
QLL G++YL + IH+D+ N+L+ + KI+DFG++ +++
Sbjct: 141 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----- 195
Query: 200 ITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ + G + I + + D+WS GV L
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 231
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 38/216 (17%)
Query: 43 DLLGEGSYGKV------KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQ 96
D++GEG++G+V K+ L + +R +K + K R GE+ V L K+
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKR-MKEYASKDDHRDFAGELEV-----LCKLGH 74
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQD------MLDSTPYKKFPIWQAHGYFL- 148
H N+I L+ + + +YL +EY G L D +L++ P F I + L
Sbjct: 75 HPNIINLLGAC--EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP--AFAIANSTASTLS 130
Query: 149 --QLLD-------GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDT 199
QLL G++YL + IH+D+ N+L+ + KI+DFG++ +++
Sbjct: 131 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----- 185
Query: 200 ITTSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ + G + I + + D+WS GV L
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 221
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 30/173 (17%)
Query: 88 EIRLL-KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
EI+LL + H NVI D+ +Y+ +E C LQD+++S + Y
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRF--LYIALELCNLNLQDLVESKNVSDENLKLQKEY 133
Query: 147 -----FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLK-------------ISDFGVA 188
Q+ G+ +LHS IIH+D+KP N+L++ ISDFG+
Sbjct: 134 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 189 ESLD--MFLHDDTITTSQGSPVFQAPEIANGLPEISGYK----VDIWSSGVTL 235
+ LD + G+ ++APE+ L E + + +DI+S G
Sbjct: 194 KKLDSGQXXFRXNLNNPSGTSGWRAPEL---LEESTKRRLTRSIDIFSMGCVF 243
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 30/173 (17%)
Query: 88 EIRLL-KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
EI+LL + H NVI D+ +Y+ +E C LQD+++S + Y
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRF--LYIALELCNLNLQDLVESKNVSDENLKLQKEY 133
Query: 147 -----FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLK-------------ISDFGVA 188
Q+ G+ +LHS IIH+D+KP N+L++ ISDFG+
Sbjct: 134 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 189 ESLD--MFLHDDTITTSQGSPVFQAPEIANGLPEISGYK----VDIWSSGVTL 235
+ LD + G+ ++APE+ L E + + +DI+S G
Sbjct: 194 KKLDSGQXXFRXNLNNPSGTSGWRAPEL---LEESTKRRLTRSIDIFSMGCVF 243
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 17/194 (8%)
Query: 45 LGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLV 104
LG G +G VK + + AVK+ K+ + E +E + + L H ++
Sbjct: 16 LGSGQFGVVK-LGKWKGQYDVAVKMIKEGSM-----SEDEFFQEAQTMMKLSHPKLVKFY 69
Query: 105 DVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIH 164
V K+ +Y++ EY G + K Q + +G+ +L S IH
Sbjct: 70 GV--CSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIH 127
Query: 165 KDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGS--PV-FQAPEIANGLPEI 221
+D+ N L+ D +K+SDFG+ ++ DD +S G+ PV + APE+ +
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTR----YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYS 183
Query: 222 SGYKVDIWSSGVTL 235
S K D+W+ G+ +
Sbjct: 184 S--KSDVWAFGILM 195
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
Y Q+ G+E+L S+ IH+D+ N+LL+ +KI DFG+A D++ D +
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGDA 253
Query: 206 S-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
P+ + APE + + D+WS GV L
Sbjct: 254 RLPLKWMAPETI--FDRVYTIQSDVWSFGVLL 283
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
Q+ G++YL +H+D+ N+LL KISDFG++++L + T PV
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPV 178
Query: 209 -FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE N S K D+WS GV +
Sbjct: 179 KWYAPECINYYKFSS--KSDVWSFGVLM 204
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
Y Q+ G+E+L S+ IH+D+ N+LL+ +KI DFG+A D++ D +
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGDA 260
Query: 206 S-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
P+ + APE + + D+WS GV L
Sbjct: 261 RLPLKWMAPETI--FDRVYTIQSDVWSFGVLL 290
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
Y Q+ G+E+L S+ IH+D+ N+LL+ +KI DFG+A D++ D +
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGDA 255
Query: 206 S-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
P+ + APE + + D+WS GV L
Sbjct: 256 RLPLKWMAPETI--FDRVYTIQSDVWSFGVLL 285
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 146 YFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQG 205
Y Q+ G+E+L S+ IH+D+ N+LL+ +KI DFG+A D++ D +
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGDA 262
Query: 206 S-PV-FQAPEIANGLPEISGYKVDIWSSGVTL 235
P+ + APE + + D+WS GV L
Sbjct: 263 RLPLKWMAPETI--FDRVYTIQSDVWSFGVLL 292
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
Q+ G++YL +H+D+ N+LL KISDFG++++L + T PV
Sbjct: 115 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 174
Query: 209 -FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE N S K D+WS GV +
Sbjct: 175 KWYAPECINYYKFSS--KSDVWSFGVLM 200
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 30 TIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREI 89
++++++ KY +G +G GS+G + L + V I KL+ + + E
Sbjct: 2 SMELRVGNKYRLGRKIGSGSFGDI--YLGANIASGEEVAI----KLECVKTKHPQLHIES 55
Query: 90 RLLKMLQHRNVIGLVDV-FVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL 148
+ KM+Q +G+ + + + ++ME L+D+ + +KF +
Sbjct: 56 KFYKMMQ--GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLAD 112
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTL--DGTL-KISDFGVAE 189
Q++ +EY+HS+ IH+D+KP N L+ L G L I DFG+A+
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
Q+ G++YL +H+D+ N+LL KISDFG++++L + T PV
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 178
Query: 209 -FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE N S K D+WS GV +
Sbjct: 179 KWYAPECINYYKFSS--KSDVWSFGVLM 204
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
Q+ G++YL +H+D+ N+LL KISDFG++++L + T PV
Sbjct: 113 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 172
Query: 209 -FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE N S K D+WS GV +
Sbjct: 173 KWYAPECINYYKFSS--KSDVWSFGVLM 198
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
Q+ G++YL +H+D+ N+LL KISDFG++++L + T PV
Sbjct: 125 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 184
Query: 209 -FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE N S K D+WS GV +
Sbjct: 185 KWYAPECINYYKFSS--KSDVWSFGVLM 210
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
Q+ G++YL +H+D+ N+LL KISDFG++++L + T PV
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 209 -FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE N S K D+WS GV +
Sbjct: 195 KWYAPECINYYKFSS--KSDVWSFGVLM 220
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
Q+ G++YL +H+D+ N+LL KISDFG++++L + T PV
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 209 -FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE N S K D+WS GV +
Sbjct: 195 KWYAPECINYYKFSS--KSDVWSFGVLM 220
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 34/214 (15%)
Query: 43 DLLGEGSYGKV------KEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQ 96
D++GEG++G+V K+ L + +R +K + K R GE+ V L K+
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKR-MKEYASKDDHRDFAGELEV-----LCKLGH 81
Query: 97 HRNVIGLVDVFVNDKKQKMYLIMEYCV-GGLQDMLDSTPY----KKFPIWQAHGYFL--- 148
H N+I L+ + + +YL +EY G L D L + F I + L
Sbjct: 82 HPNIINLLGAC--EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 139
Query: 149 QLLD-------GLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTIT 201
QLL G++YL + IH+++ N+L+ + KI+DFG++ +++ +
Sbjct: 140 QLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVY-----VK 194
Query: 202 TSQGSPVFQAPEIANGLPEISGYKVDIWSSGVTL 235
+ G + I + + D+WS GV L
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 228
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 10 GDMISIFHRVDSDQVIYDNKTIKVKMIGKYVMGD-----LLGEGSYGKVKEMLDSETLCR 64
GD+ F ++SD+ + V++ M D ++G G +G+V ++T
Sbjct: 159 GDVFQKF--IESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKM 216
Query: 65 RAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLVDV-FVNDKKQKMYLIMEYCV 123
A+K KK++ ++ GE E +L ++ + +V + + K+ I++
Sbjct: 217 YAMKCLDKKRI-KMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 275
Query: 124 GG-LQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKI 182
GG L L + + F Y +++ GLE++H++ ++++D+KP N+LL G ++I
Sbjct: 276 GGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI 333
Query: 183 SDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
SD G+A S G+ + APE+
Sbjct: 334 SDLGLACDFS----KKKPHASVGTHGYMAPEV 361
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 10 GDMISIFHRVDSDQVIYDNKTIKVKMIGKYVMGD-----LLGEGSYGKVKEMLDSETLCR 64
GD+ F ++SD+ + V++ M D ++G G +G+V ++T
Sbjct: 158 GDVFQKF--IESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKM 215
Query: 65 RAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLVDV-FVNDKKQKMYLIMEYCV 123
A+K KK++ ++ GE E +L ++ + +V + + K+ I++
Sbjct: 216 YAMKCLDKKRI-KMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 274
Query: 124 GG-LQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKI 182
GG L L + + F Y +++ GLE++H++ ++++D+KP N+LL G ++I
Sbjct: 275 GGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI 332
Query: 183 SDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
SD G+A S G+ + APE+
Sbjct: 333 SDLGLACDFS----KKKPHASVGTHGYMAPEV 360
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 10 GDMISIFHRVDSDQVIYDNKTIKVKMIGKYVMGD-----LLGEGSYGKVKEMLDSETLCR 64
GD+ F ++SD+ + V++ M D ++G G +G+V ++T
Sbjct: 159 GDVFQKF--IESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKM 216
Query: 65 RAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLVDV-FVNDKKQKMYLIMEYCV 123
A+K KK++ ++ GE E +L ++ + +V + + K+ I++
Sbjct: 217 YAMKCLDKKRI-KMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 275
Query: 124 GG-LQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKI 182
GG L L + + F Y +++ GLE++H++ ++++D+KP N+LL G ++I
Sbjct: 276 GGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI 333
Query: 183 SDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
SD G+A S G+ + APE+
Sbjct: 334 SDLGLACDFS----KKKPHASVGTHGYMAPEV 361
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 10 GDMISIFHRVDSDQVIYDNKTIKVKMIGKYVMGD-----LLGEGSYGKVKEMLDSETLCR 64
GD+ F ++SD+ + V++ M D ++G G +G+V ++T
Sbjct: 159 GDVFQKF--IESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKM 216
Query: 65 RAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRNVIGLVDV-FVNDKKQKMYLIMEYCV 123
A+K KK++ ++ GE E +L ++ + +V + + K+ I++
Sbjct: 217 YAMKCLDKKRI-KMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 275
Query: 124 GG-LQDMLDSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKI 182
GG L L + + F Y +++ GLE++H++ ++++D+KP N+LL G ++I
Sbjct: 276 GGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI 333
Query: 183 SDFGVAESLDMFLHDDTITTSQGSPVFQAPEI 214
SD G+A S G+ + APE+
Sbjct: 334 SDLGLACDFS----KKKPHASVGTHGYMAPEV 361
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 30 TIKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREI 89
++++++ +Y +G +G GS+G + L ++ V I KL+ + + E
Sbjct: 2 SMELRVGNRYRLGRKIGSGSFGDI--YLGTDIAAGEEVAI----KLECVKTKHPQLHIES 55
Query: 90 RLLKMLQHRNVIGLVDV-FVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFL 148
++ KM+Q +G+ + + + ++ME L+D+ + +KF +
Sbjct: 56 KIYKMMQ--GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLAD 112
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTL--DGTL-KISDFGVAE 189
Q++ +EY+HS+ IH+D+KP N L+ L G L I DFG+A+
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 23/148 (15%)
Query: 88 EIRLL-KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPI-----W 141
EI+LL + H NVI D+ +Y+ +E C LQD+++S + +
Sbjct: 58 EIKLLTESDDHPNVIRYYCSETTDRF--LYIALELCNLNLQDLVESKNVSDENLKLQKEY 115
Query: 142 QAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLK-------------ISDFGVA 188
Q+ G+ +LHS IIH+D+KP N+L++ ISDFG+
Sbjct: 116 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 189 ESLD--MFLHDDTITTSQGSPVFQAPEI 214
+ LD + G+ ++APE+
Sbjct: 176 KKLDSGQXXFRXNLNNPSGTSGWRAPEL 203
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 149 QLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITTSQGSPV 208
Q+ G++YL +H+D+ N+LL KISDFG++++L + T PV
Sbjct: 133 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 192
Query: 209 -FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ APE N S K D+WS GV +
Sbjct: 193 KWYAPECINYYKFSS--KSDVWSFGVLM 218
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 37 GKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQ 96
G+Y + LG G + V D + A+K+ K + E +D EI+LLK ++
Sbjct: 31 GRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYT----ETALD-EIKLLKCVR 85
Query: 97 HRN--------VIGLVDVFVNDKKQKMYLIMEYCVGG--LQDMLDSTPYKKFPIWQAHGY 146
+ V+ L+D F +++ M + V G L + + Y+ P+
Sbjct: 86 ESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSI 145
Query: 147 FLQLLDGLEYLHSQG-IIHKDIKPGNLLLTLD 177
Q+L GL+YLHS+ IIH DIKP N+L+ +D
Sbjct: 146 IRQVLQGLDYLHSKCKIIHTDIKPENILMCVD 177
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 23/148 (15%)
Query: 88 EIRLL-KMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGY 146
EI+LL + H NVI D+ +Y+ +E C LQD+++S + Y
Sbjct: 58 EIKLLTESDDHPNVIRYYCSETTDRF--LYIALELCNLNLQDLVESKNVSDENLKLQKEY 115
Query: 147 -----FLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLK-------------ISDFGVA 188
Q+ G+ +LHS IIH+D+KP N+L++ ISDFG+
Sbjct: 116 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 189 ESLD--MFLHDDTITTSQGSPVFQAPEI 214
+ LD + G+ ++APE+
Sbjct: 176 KKLDSGQSSFRTNLNNPSGTSGWRAPEL 203
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 31 IKVKMIGKYVMGDLLGEGSYGKVKEMLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIR 90
+++++ +Y +G +G GS+G + L ++ V I KL+ + + E +
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDI--YLGTDIAAGEEVAI----KLECVKTKHPQLHIESK 54
Query: 91 LLKMLQHRNVIGLVDV-FVNDKKQKMYLIMEYCVGGLQDMLDSTPYKKFPIWQAHGYFLQ 149
+ KM+Q +G+ + + + ++ME L+D+ + +KF + Q
Sbjct: 55 IYKMMQ--GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQ 111
Query: 150 LLDGLEYLHSQGIIHKDIKPGNLLLTL--DGTL-KISDFGVAE 189
++ +EY+HS+ IH+D+KP N L+ L G L I DFG+A+
Sbjct: 112 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 84/214 (39%), Gaps = 33/214 (15%)
Query: 45 LGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVD--REIRLLKMLQH 97
LGE +GKV + E A+K K K G + + E L LQH
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-----EGPLREEFRHEAMLRARLQH 88
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDML--------------DSTPYKKFPIWQ 142
NV+ L+ V D Q + +I YC G L + L D T
Sbjct: 89 PNVVCLLGVVTKD--QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 146
Query: 143 AHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
Q+ G+EYL S ++HKD+ N+L+ +KISD G+ + + +
Sbjct: 147 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 203 SQGSPVFQAPE-IANGLPEISGYKVDIWSSGVTL 235
S + APE I G I DIWS GV L
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDS---DIWSYGVVL 237
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 84/214 (39%), Gaps = 33/214 (15%)
Query: 45 LGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVD--REIRLLKMLQH 97
LGE +GKV + E A+K K K G + + E L LQH
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-----EGPLREEFRHEAMLRARLQH 71
Query: 98 RNVIGLVDVFVNDKKQKMYLIMEYCVGG-LQDML--------------DSTPYKKFPIWQ 142
NV+ L+ V D Q + +I YC G L + L D T
Sbjct: 72 PNVVCLLGVVTKD--QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 129
Query: 143 AHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLDMFLHDDTITT 202
Q+ G+EYL S ++HKD+ N+L+ +KISD G+ + + +
Sbjct: 130 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 203 SQGSPVFQAPE-IANGLPEISGYKVDIWSSGVTL 235
S + APE I G I DIWS GV L
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDS---DIWSYGVVL 220
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 31/210 (14%)
Query: 45 LGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
LG G++G+V E M + + + AVK + ++ E++ E ++ H+N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKFNHQN 109
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLD------ 152
++ + V + + +++ME GG L+ L T + P + L LL
Sbjct: 110 IVRCIGVSLQSLPR--FILMELMAGGDLKSFLRET--RPRPSQPSSLAMLDLLHVARDIA 165
Query: 153 -GLEYLHSQGIIHKDIKPGNLLLTLDGT---LKISDFGVAESLDMFLHDDTITTSQGS-- 206
G +YL IH+DI N LLT G KI DFG+A ++ + G
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD----IYRASYYRKGGCAM 221
Query: 207 -PVFQAPEIANGLPEISGYKVDIWSSGVTL 235
PV P A + I K D WS GV L
Sbjct: 222 LPVKWMPPEAF-MEGIFTSKTDTWSFGVLL 250
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 31/210 (14%)
Query: 45 LGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
LG G++G+V E M + + + AVK + ++ E++ E ++ H+N
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKFNHQN 94
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLD------ 152
++ + V + + +++ME GG L+ L T + P + L LL
Sbjct: 95 IVRCIGVSLQSLPR--FILMELMAGGDLKSFLRET--RPRPSQPSSLAMLDLLHVARDIA 150
Query: 153 -GLEYLHSQGIIHKDIKPGNLLLTLDG---TLKISDFGVAESLDMFLHDDTITTSQGS-- 206
G +YL IH+DI N LLT G KI DFG+A ++ + G
Sbjct: 151 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD----IYRASYYRKGGCAM 206
Query: 207 -PVFQAPEIANGLPEISGYKVDIWSSGVTL 235
PV P A + I K D WS GV L
Sbjct: 207 LPVKWMPPEAF-MEGIFTSKTDTWSFGVLL 235
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 73 KKLQRIPN-GEIN-VDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDML 130
K L RI + GE++ E ++K H NV+ L+ + + + + ++ G L++ +
Sbjct: 63 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 122
Query: 131 DSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAES 190
+ + + G+ LQ+ G++YL S+ +H+D+ N +L T+K++DFG+A
Sbjct: 123 RNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR- 180
Query: 191 LDMFLHDDTITTSQGSPVFQAPEIANGLPEISGYKV----DIWSSGVTL 235
DM+ D + + P L + K D+WS GV L
Sbjct: 181 -DMY--DKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 226
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 45 LGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
LG G++G+V E M + + + AVK + ++ E++ E ++ L H+N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKLNHQN 109
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLD------ 152
++ + V + + ++++E GG L+ L T + P + L LL
Sbjct: 110 IVRCIGVSLQSLPR--FILLELMAGGDLKSFLRET--RPRPSQPSSLAMLDLLHVARDIA 165
Query: 153 -GLEYLHSQGIIHKDIKPGNLLLTLDGT---LKISDFGVAESLDMFLHDDTITTSQGSPV 208
G +YL IH+DI N LLT G KI DFG+A + + +
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 209 FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ PE + I K D WS GV L
Sbjct: 226 WMPPEAF--MEGIFTSKTDTWSFGVLL 250
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 45 LGEGSYGKVKE-----MLDSETLCRRAVKIFKKKKLQRIPNGEINVDREIRLLKMLQHRN 99
LG G++G+V E M + + + AVK + ++ E++ E ++ L H+N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKLNHQN 95
Query: 100 VIGLVDVFVNDKKQKMYLIMEYCVGG-LQDMLDSTPYKKFPIWQAHGYFLQLLD------ 152
++ + V + + ++++E GG L+ L T + P + L LL
Sbjct: 96 IVRCIGVSLQSLPR--FILLELMAGGDLKSFLRET--RPRPSQPSSLAMLDLLHVARDIA 151
Query: 153 -GLEYLHSQGIIHKDIKPGNLLLTLDG---TLKISDFGVAESLDMFLHDDTITTSQGSPV 208
G +YL IH+DI N LLT G KI DFG+A + + +
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 209 FQAPEIANGLPEISGYKVDIWSSGVTL 235
+ PE + I K D WS GV L
Sbjct: 212 WMPPEAF--MEGIFTSKTDTWSFGVLL 236
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRR---AVKIFKKKKLQRIPNGEINVDREIRLLKMLQ 96
V+ +LGEG +G+V E + + + AVK KK + N E E ++K L
Sbjct: 15 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD--CTLDNKE-KFMSEAVIMKNLD 71
Query: 97 HRNVIGLVDVFVNDKKQKMYLIME-YCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
H +++ L+ + +++ ++IME Y G L L+ + Y LQ+ +
Sbjct: 72 HPHIVKLIGII---EEEPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMA 127
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLD 192
YL S +H+DI N+L+ +K+ DFG++ ++
Sbjct: 128 YLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 164
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRR---AVKIFKKKKLQRIPNGEINVDREIRLLKMLQ 96
V+ +LGEG +G+V E + + + AVK KK + N E E ++K L
Sbjct: 11 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD--CTLDNKE-KFMSEAVIMKNLD 67
Query: 97 HRNVIGLVDVFVNDKKQKMYLIME-YCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
H +++ L+ + +++ ++IME Y G L L+ + Y LQ+ +
Sbjct: 68 HPHIVKLIGII---EEEPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMA 123
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLD 192
YL S +H+DI N+L+ +K+ DFG++ ++
Sbjct: 124 YLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 160
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 40 VMGDLLGEGSYGKVKEMLDSETLCRR---AVKIFKKKKLQRIPNGEINVDREIRLLKMLQ 96
V+ +LGEG +G+V E + + + AVK KK + N E + + ++K L
Sbjct: 27 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD--CTLDNKEKFMSEAV-IMKNLD 83
Query: 97 HRNVIGLVDVFVNDKKQKMYLIME-YCVGGLQDMLDSTPYKKFPIWQAHGYFLQLLDGLE 155
H +++ L+ + +++ ++IME Y G L L+ + Y LQ+ +
Sbjct: 84 HPHIVKLIGII---EEEPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMA 139
Query: 156 YLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAESLD 192
YL S +H+DI N+L+ +K+ DFG++ ++
Sbjct: 140 YLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 176
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 73 KKLQRIPN-GEIN-VDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDML 130
K L RI + GE++ E ++K H NV+ L+ + + + + ++ G L++ +
Sbjct: 64 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 123
Query: 131 DSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAES 190
+ + + G+ LQ+ G+++L S+ +H+D+ N +L T+K++DFG+A
Sbjct: 124 RNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR- 181
Query: 191 LDMFLHD-DTITTSQGSPVFQAPEIANGLPEISGYKV----DIWSSGVTL 235
DM+ + D++ G+ + P L + K D+WS GV L
Sbjct: 182 -DMYDKEFDSVHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLL 227
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 73 KKLQRIPN-GEIN-VDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDML 130
K L RI + GE++ E ++K H NV+ L+ + + + + ++ G L++ +
Sbjct: 62 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 121
Query: 131 DSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAES 190
+ + + G+ LQ+ G+++L S+ +H+D+ N +L T+K++DFG+A
Sbjct: 122 RNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR- 179
Query: 191 LDMFLHD-DTITTSQGSPVFQAPEIANGLPEISGYKV----DIWSSGVTL 235
DM+ + D++ G+ + P L + K D+WS GV L
Sbjct: 180 -DMYDKEFDSVHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLL 225
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 73 KKLQRIPN-GEIN-VDREIRLLKMLQHRNVIGLVDVFVNDKKQKMYLIMEYCVGGLQDML 130
K L RI + GE++ E ++K H NV+ L+ + + + + ++ G L++ +
Sbjct: 65 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 124
Query: 131 DSTPYKKFPIWQAHGYFLQLLDGLEYLHSQGIIHKDIKPGNLLLTLDGTLKISDFGVAES 190
+ + + G+ LQ+ G+++L S+ +H+D+ N +L T+K++DFG+A
Sbjct: 125 RNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR- 182
Query: 191 LDMFLHD-DTITTSQGSPVFQAPEIANGLPEISGYKV----DIWSSGVTL 235
DM+ + D++ G+ + P L + K D+WS GV L
Sbjct: 183 -DMYDKEFDSVHNKTGA---KLPVKWMALESLQTQKFTTKSDVWSFGVLL 228
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.141 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,550,308
Number of Sequences: 62578
Number of extensions: 321749
Number of successful extensions: 2972
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 680
Number of HSP's gapped (non-prelim): 1116
length of query: 235
length of database: 14,973,337
effective HSP length: 96
effective length of query: 139
effective length of database: 8,965,849
effective search space: 1246253011
effective search space used: 1246253011
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)