Query psy788
Match_columns 126
No_of_seqs 117 out of 1460
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 21:09:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy788.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/788hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3aow_A Putative uncharacterize 99.6 1.6E-14 5.5E-19 108.3 12.0 101 7-123 339-443 (448)
2 3qgu_A LL-diaminopimelate amin 99.6 1E-14 3.4E-19 108.7 10.2 101 7-125 340-440 (449)
3 3fvs_A Kynurenine--oxoglutarat 99.6 1.3E-14 4.5E-19 107.0 9.6 120 5-124 301-421 (422)
4 3b46_A Aminotransferase BNA3; 99.6 2.6E-14 8.7E-19 106.9 10.8 113 7-121 326-443 (447)
5 3ei9_A LL-diaminopimelate amin 99.6 3.3E-14 1.1E-18 105.5 11.0 99 7-123 328-426 (432)
6 2hox_A ALLIIN lyase 1; cystein 99.5 2.5E-14 8.5E-19 106.8 9.7 99 6-124 311-424 (427)
7 3e2y_A Kynurenine-oxoglutarate 99.5 3.3E-14 1.1E-18 104.4 9.8 117 4-121 293-409 (410)
8 2o1b_A Aminotransferase, class 99.5 8.1E-14 2.8E-18 102.8 11.7 101 7-124 302-402 (404)
9 1b5p_A Protein (aspartate amin 99.5 2.8E-14 9.7E-19 104.5 9.2 100 6-124 285-384 (385)
10 3kax_A Aminotransferase, class 99.5 1.3E-13 4.3E-18 100.3 11.9 104 3-122 277-382 (383)
11 3ihj_A Alanine aminotransferas 99.5 6.2E-14 2.1E-18 106.5 10.0 111 9-123 380-491 (498)
12 2r2n_A Kynurenine/alpha-aminoa 99.5 1.2E-13 4.1E-18 102.5 11.3 103 7-124 316-423 (425)
13 1yiz_A Kynurenine aminotransfe 99.5 1.9E-13 6.4E-18 101.2 11.4 118 7-124 311-428 (429)
14 2x5d_A Probable aminotransfera 99.5 9.3E-14 3.2E-18 102.4 9.6 105 5-123 292-396 (412)
15 3h14_A Aminotransferase, class 99.5 1.7E-13 5.7E-18 100.3 10.8 104 6-124 277-381 (391)
16 2z61_A Probable aspartate amin 99.5 1E-13 3.5E-18 100.7 9.5 99 6-123 271-369 (370)
17 3tcm_A Alanine aminotransferas 99.5 1.3E-13 4.5E-18 104.7 10.2 112 8-123 380-492 (500)
18 3nra_A Aspartate aminotransfer 99.5 2.3E-13 7.7E-18 99.8 11.1 106 3-124 298-404 (407)
19 3jtx_A Aminotransferase; NP_28 99.5 2.1E-13 7.2E-18 99.7 10.9 102 7-122 293-395 (396)
20 3l8a_A METC, putative aminotra 99.5 6.9E-14 2.4E-18 103.6 8.3 103 5-123 317-420 (421)
21 1gd9_A Aspartate aminotransfer 99.5 1.4E-13 4.9E-18 100.5 9.5 99 9-123 286-384 (389)
22 3f6t_A Aspartate aminotransfer 99.5 1.2E-13 4E-18 105.8 9.4 112 5-123 407-523 (533)
23 3fdb_A Beta C-S lyase, putativ 99.5 6.1E-14 2.1E-18 101.9 7.4 102 6-124 272-375 (377)
24 1u08_A Hypothetical aminotrans 99.5 2.5E-13 8.4E-18 99.2 10.0 101 7-120 285-385 (386)
25 3dzz_A Putative pyridoxal 5'-p 99.5 2E-13 6.9E-18 99.4 9.5 103 6-124 284-388 (391)
26 3piu_A 1-aminocyclopropane-1-c 99.5 5E-13 1.7E-17 99.2 11.8 107 7-124 324-431 (435)
27 4dq6_A Putative pyridoxal phos 99.5 2.5E-13 8.5E-18 98.9 9.8 102 6-123 288-391 (391)
28 3dyd_A Tyrosine aminotransfera 99.5 4.1E-13 1.4E-17 99.7 11.1 105 6-124 318-423 (427)
29 2dou_A Probable N-succinyldiam 99.5 3.6E-13 1.2E-17 98.1 10.3 100 4-122 276-375 (376)
30 1d2f_A MALY protein; aminotran 99.5 8.4E-13 2.9E-17 96.5 11.7 102 7-124 285-388 (390)
31 2o0r_A RV0858C (N-succinyldiam 99.4 4.4E-13 1.5E-17 98.8 9.7 107 7-123 282-394 (411)
32 2zy4_A L-aspartate beta-decarb 99.4 2.3E-13 7.9E-18 104.6 8.4 112 5-123 404-520 (546)
33 3ppl_A Aspartate aminotransfer 99.4 1.1E-12 3.8E-17 97.2 11.7 101 7-123 311-418 (427)
34 1c7n_A Cystalysin; transferase 99.4 1.2E-12 4.2E-17 95.8 11.3 101 7-123 289-391 (399)
35 2zyj_A Alpha-aminodipate amino 99.4 2.4E-12 8.1E-17 94.4 12.6 100 8-123 288-391 (397)
36 3g7q_A Valine-pyruvate aminotr 99.4 1.5E-12 5.1E-17 95.8 11.5 105 8-124 301-412 (417)
37 3bwn_A AT1G70560, L-tryptophan 99.4 3.8E-13 1.3E-17 99.1 8.2 95 7-123 277-385 (391)
38 1j32_A Aspartate aminotransfer 99.4 6E-13 2.1E-17 97.1 8.7 101 6-124 285-386 (388)
39 3op7_A Aminotransferase class 99.4 9.2E-13 3.1E-17 95.8 9.5 102 4-124 268-370 (375)
40 3asa_A LL-diaminopimelate amin 99.4 3.4E-13 1.2E-17 99.2 7.1 98 9-123 293-391 (400)
41 1xi9_A Putative transaminase; 99.4 7.2E-13 2.5E-17 97.5 8.5 103 7-124 299-402 (406)
42 1iay_A ACC synthase 2, 1-amino 99.4 3.4E-12 1.2E-16 94.5 12.2 106 8-124 320-426 (428)
43 1bw0_A TAT, protein (tyrosine 99.4 2.2E-12 7.6E-17 95.0 10.9 104 7-124 308-412 (416)
44 1vp4_A Aminotransferase, putat 99.4 1.3E-12 4.5E-17 96.8 9.7 101 7-123 310-416 (425)
45 3ez1_A Aminotransferase MOCR f 99.4 3.8E-12 1.3E-16 94.0 11.9 101 7-123 305-413 (423)
46 3ele_A Amino transferase; RER0 99.4 3E-12 1E-16 93.7 10.9 90 13-123 305-394 (398)
47 3b1d_A Betac-S lyase; HET: PLP 99.1 3E-14 1E-18 104.5 0.0 105 3-123 285-391 (392)
48 2gb3_A Aspartate aminotransfer 99.4 3.7E-12 1.3E-16 93.9 11.0 104 5-123 291-400 (409)
49 3d6k_A Putative aminotransfera 99.4 8.2E-12 2.8E-16 92.5 11.5 101 7-123 309-416 (422)
50 1o4s_A Aspartate aminotransfer 99.4 6.1E-12 2.1E-16 92.2 10.6 94 10-124 295-388 (389)
51 2zc0_A Alanine glyoxylate tran 99.4 7E-12 2.4E-16 92.0 10.8 102 8-124 299-403 (407)
52 3ezs_A Aminotransferase ASPB; 99.4 6E-12 2.1E-16 91.4 10.2 96 7-124 279-374 (376)
53 1v2d_A Glutamine aminotransfer 99.3 1.5E-11 5.3E-16 89.5 11.5 97 7-123 273-369 (381)
54 3if2_A Aminotransferase; YP_26 99.3 1.9E-11 6.5E-16 90.8 11.6 104 8-123 327-438 (444)
55 3g0t_A Putative aminotransfera 99.3 1.8E-11 6.1E-16 90.6 11.0 96 10-124 333-436 (437)
56 2x5f_A Aspartate_tyrosine_phen 99.3 4.7E-11 1.6E-15 88.4 11.1 90 10-123 333-427 (430)
57 3rq1_A Aminotransferase class 99.2 4.6E-11 1.6E-15 88.1 10.2 88 9-124 326-414 (418)
58 3k7y_A Aspartate aminotransfer 99.2 1.8E-11 6E-16 91.1 6.3 83 8-123 312-403 (405)
59 3a2b_A Serine palmitoyltransfe 99.2 1.2E-10 4.2E-15 85.2 10.2 97 9-123 292-390 (398)
60 3ftb_A Histidinol-phosphate am 99.2 4.4E-10 1.5E-14 81.0 11.9 94 7-120 262-359 (361)
61 3fkd_A L-threonine-O-3-phospha 99.1 1.7E-10 5.7E-15 83.1 8.6 95 8-123 245-340 (350)
62 3euc_A Histidinol-phosphate am 99.1 4.9E-10 1.7E-14 81.1 10.9 94 7-123 272-366 (367)
63 3get_A Histidinol-phosphate am 99.1 9.4E-10 3.2E-14 79.5 11.9 92 7-122 273-364 (365)
64 3t18_A Aminotransferase class 99.1 5.5E-10 1.9E-14 82.1 10.5 85 8-123 323-408 (413)
65 3ly1_A Putative histidinol-pho 99.1 1.3E-09 4.4E-14 78.4 11.9 92 8-124 260-351 (354)
66 3ffh_A Histidinol-phosphate am 99.1 1.6E-09 5.4E-14 78.3 12.0 91 7-121 271-362 (363)
67 3tqx_A 2-amino-3-ketobutyrate 99.1 1.3E-09 4.5E-14 79.4 10.5 99 8-124 295-395 (399)
68 1fg7_A Histidinol phosphate am 99.0 2.5E-09 8.5E-14 77.5 11.0 89 9-121 264-354 (356)
69 1lc5_A COBD, L-threonine-O-3-p 99.0 1.8E-09 6.3E-14 78.1 10.2 94 7-122 263-357 (364)
70 1fc4_A 2-amino-3-ketobutyrate 99.0 3.5E-09 1.2E-13 77.4 10.6 95 11-123 299-395 (401)
71 1iug_A Putative aspartate amin 99.0 2.4E-09 8.3E-14 76.6 9.6 97 8-124 248-347 (352)
72 2dr1_A PH1308 protein, 386AA l 99.0 7.1E-09 2.4E-13 75.1 12.1 95 9-123 278-377 (386)
73 1vjo_A Alanine--glyoxylate ami 99.0 5.8E-09 2E-13 76.0 11.3 97 8-123 291-393 (393)
74 3hdo_A Histidinol-phosphate am 99.0 9.3E-09 3.2E-13 74.3 12.2 94 7-123 260-353 (360)
75 2bwn_A 5-aminolevulinate synth 99.0 4.1E-09 1.4E-13 77.1 9.8 97 10-123 300-398 (401)
76 1m32_A 2-aminoethylphosphonate 99.0 1.2E-08 4.2E-13 73.1 12.0 95 10-124 264-364 (366)
77 3cq5_A Histidinol-phosphate am 99.0 1.1E-08 3.9E-13 74.2 11.6 92 7-125 277-368 (369)
78 3kgw_A Alanine-glyoxylate amin 98.9 1.4E-08 4.7E-13 73.6 11.8 96 9-123 284-386 (393)
79 2yrr_A Aminotransferase, class 98.9 1.2E-08 4E-13 72.9 11.2 94 10-123 253-351 (353)
80 2ch1_A 3-hydroxykynurenine tra 98.9 1.2E-08 4.1E-13 74.3 11.0 97 8-123 278-381 (396)
81 3p1t_A Putative histidinol-pho 98.9 1.8E-08 6E-13 71.9 11.6 91 8-123 245-335 (337)
82 2dkj_A Serine hydroxymethyltra 98.9 2.3E-08 7.8E-13 73.0 12.0 104 8-124 277-387 (407)
83 4f4e_A Aromatic-amino-acid ami 98.9 3.3E-09 1.1E-13 78.4 7.5 85 7-123 331-420 (420)
84 3fsl_A Aromatic-amino-acid ami 98.9 3.4E-09 1.1E-13 77.3 7.3 83 7-121 309-396 (397)
85 2w8t_A SPT, serine palmitoyltr 98.9 1.4E-08 4.8E-13 75.3 10.6 97 10-123 314-413 (427)
86 3meb_A Aspartate aminotransfer 98.9 3.2E-09 1.1E-13 79.4 7.1 86 8-124 348-443 (448)
87 7aat_A Aspartate aminotransfer 98.9 3.3E-09 1.1E-13 77.7 7.0 84 7-122 312-400 (401)
88 2huf_A Alanine glyoxylate amin 98.9 2.6E-08 9E-13 72.4 11.7 96 9-123 280-381 (393)
89 1uu1_A Histidinol-phosphate am 98.9 1E-08 3.4E-13 73.5 9.2 87 7-121 248-334 (335)
90 4h51_A Aspartate aminotransfer 98.9 7.8E-09 2.7E-13 77.3 8.7 85 7-124 327-416 (420)
91 1bs0_A Protein (8-amino-7-oxon 98.9 5.7E-09 1.9E-13 75.9 7.6 95 9-121 287-383 (384)
92 3isl_A Purine catabolism prote 98.9 1.7E-08 6E-13 73.8 10.2 97 8-123 285-388 (416)
93 2vi8_A Serine hydroxymethyltra 98.9 2.2E-08 7.4E-13 73.1 10.5 103 8-123 276-385 (405)
94 4eu1_A Mitochondrial aspartate 98.9 5E-09 1.7E-13 77.0 6.9 84 8-123 321-409 (409)
95 3pj0_A LMO0305 protein; struct 98.9 1.1E-08 3.7E-13 73.7 8.4 91 15-121 261-358 (359)
96 2z9v_A Aspartate aminotransfer 98.9 2E-08 7E-13 73.0 9.9 95 10-123 268-369 (392)
97 3lws_A Aromatic amino acid bet 98.9 8.2E-09 2.8E-13 74.4 7.7 96 9-122 254-356 (357)
98 3nnk_A Ureidoglycine-glyoxylat 98.8 3.1E-08 1.1E-12 72.3 10.2 95 10-123 288-388 (411)
99 1yaa_A Aspartate aminotransfer 98.8 7.6E-09 2.6E-13 76.0 6.7 85 7-123 320-409 (412)
100 3kki_A CAI-1 autoinducer synth 98.8 4.4E-08 1.5E-12 71.9 10.8 95 11-124 307-403 (409)
101 4hvk_A Probable cysteine desul 98.8 4.7E-08 1.6E-12 70.3 10.5 103 7-123 251-371 (382)
102 4eb5_A Probable cysteine desul 98.8 7.2E-08 2.5E-12 69.6 11.2 102 8-123 252-371 (382)
103 3zrp_A Serine-pyruvate aminotr 98.8 9.2E-08 3.2E-12 69.0 11.6 93 9-123 263-361 (384)
104 2fyf_A PSAT, phosphoserine ami 98.8 7.2E-08 2.5E-12 70.6 11.1 95 10-124 296-397 (398)
105 1ajs_A Aspartate aminotransfer 98.8 1.6E-08 5.3E-13 74.3 7.4 86 7-124 320-410 (412)
106 2q7w_A Aspartate aminotransfer 98.8 7.5E-09 2.6E-13 75.5 5.2 84 7-122 308-396 (396)
107 1eg5_A Aminotransferase; PLP-d 98.7 1E-07 3.5E-12 68.8 10.6 103 7-123 255-374 (384)
108 1v72_A Aldolase; PLP-dependent 98.7 1.4E-07 4.9E-12 67.4 10.2 88 10-124 262-352 (356)
109 2bkw_A Alanine-glyoxylate amin 98.7 1.7E-07 5.9E-12 67.7 10.6 93 10-124 279-383 (385)
110 1kmj_A Selenocysteine lyase; p 98.7 1.9E-07 6.6E-12 67.8 10.8 100 9-123 298-403 (406)
111 3f0h_A Aminotransferase; RER07 98.7 1.6E-07 5.5E-12 67.8 10.3 98 9-125 275-374 (376)
112 1ax4_A Tryptophanase; tryptoph 98.7 1.7E-07 6E-12 69.8 10.1 102 18-123 329-439 (467)
113 1w23_A Phosphoserine aminotran 98.7 2.4E-07 8.3E-12 66.5 10.5 94 9-124 259-359 (360)
114 3cai_A Possible aminotransfera 98.7 2.9E-07 9.9E-12 67.2 10.8 93 9-120 300-404 (406)
115 2ay1_A Aroat, aromatic amino a 98.6 4E-08 1.4E-12 71.6 5.9 83 7-121 305-392 (394)
116 1elu_A L-cysteine/L-cystine C- 98.6 2.1E-07 7.2E-12 67.4 9.7 90 8-121 293-388 (390)
117 3ffr_A Phosphoserine aminotran 98.6 5.9E-07 2E-11 64.3 11.2 91 10-122 264-361 (362)
118 3f9t_A TDC, L-tyrosine decarbo 98.6 9E-07 3.1E-11 63.9 11.6 91 7-123 304-396 (397)
119 1svv_A Threonine aldolase; str 98.6 2.1E-07 7.1E-12 66.6 7.8 91 8-124 264-357 (359)
120 2oqx_A Tryptophanase; lyase, p 98.6 1.2E-07 4.1E-12 70.7 6.5 106 13-123 326-440 (467)
121 1t3i_A Probable cysteine desul 98.6 7.6E-07 2.6E-11 65.0 10.6 100 9-123 302-411 (420)
122 2c0r_A PSAT, phosphoserine ami 98.5 8.5E-07 2.9E-11 63.9 10.2 94 9-124 260-360 (362)
123 2ez2_A Beta-tyrosinase, tyrosi 98.5 5.2E-07 1.8E-11 67.1 8.6 100 20-123 321-429 (456)
124 3ecd_A Serine hydroxymethyltra 98.5 1.2E-06 4.3E-11 64.0 10.4 104 8-124 286-396 (425)
125 1rv3_A Serine hydroxymethyltra 98.5 1.2E-06 4E-11 66.2 10.5 98 8-123 321-429 (483)
126 3vax_A Putative uncharacterize 98.5 1.6E-07 5.6E-12 68.3 5.5 102 7-124 279-399 (400)
127 3gbx_A Serine hydroxymethyltra 98.5 2.1E-06 7.1E-11 62.8 11.3 104 7-123 284-394 (420)
128 1wyu_B Glycine dehydrogenase s 98.4 1.9E-06 6.5E-11 64.8 10.6 98 7-123 339-439 (474)
129 3i4j_A Aminotransferase, class 98.4 1.7E-06 5.7E-11 63.9 9.5 108 8-124 317-427 (430)
130 3lvm_A Cysteine desulfurase; s 98.3 4.8E-06 1.6E-10 61.0 9.9 101 7-123 279-397 (423)
131 1sff_A 4-aminobutyrate aminotr 98.3 2.8E-06 9.7E-11 62.4 8.3 96 13-123 320-422 (426)
132 1jg8_A L-ALLO-threonine aldola 98.3 3E-06 1E-10 60.5 8.0 89 12-124 254-345 (347)
133 2eh6_A Acoat, acetylornithine 98.2 4.8E-06 1.6E-10 60.1 8.3 84 12-122 290-375 (375)
134 3n5m_A Adenosylmethionine-8-am 98.2 9.3E-06 3.2E-10 60.4 9.8 106 9-124 343-451 (452)
135 1zod_A DGD, 2,2-dialkylglycine 98.2 4.8E-06 1.6E-10 61.5 8.0 99 13-124 326-431 (433)
136 1vef_A Acetylornithine/acetyl- 98.2 5.7E-06 1.9E-10 60.2 8.3 87 12-123 305-395 (395)
137 2e7j_A SEP-tRNA:Cys-tRNA synth 98.2 7.2E-07 2.4E-11 64.2 3.4 93 12-124 267-369 (371)
138 2aeu_A Hypothetical protein MJ 98.2 3.2E-06 1.1E-10 61.7 6.8 76 32-122 289-368 (374)
139 1wyu_A Glycine dehydrogenase ( 98.2 1.5E-05 5E-10 59.2 10.5 93 8-122 340-437 (438)
140 1qz9_A Kynureninase; kynurenin 98.2 1.7E-05 5.8E-10 57.9 10.6 89 8-123 301-400 (416)
141 3nx3_A Acoat, acetylornithine 98.2 1.9E-05 6.4E-10 57.5 10.0 93 7-124 299-394 (395)
142 2ord_A Acoat, acetylornithine 98.2 6.3E-06 2.1E-10 60.1 7.4 88 12-123 302-395 (397)
143 3dxv_A Alpha-amino-epsilon-cap 98.1 1.1E-05 3.9E-10 59.6 8.8 100 10-123 322-423 (439)
144 3oks_A 4-aminobutyrate transam 98.1 1.7E-05 5.8E-10 59.2 9.4 101 9-124 348-450 (451)
145 3h7f_A Serine hydroxymethyltra 98.1 3.1E-05 1.1E-09 57.7 10.6 99 8-123 298-412 (447)
146 3ruy_A Ornithine aminotransfer 98.1 9.2E-06 3.2E-10 59.0 7.6 86 11-123 302-392 (392)
147 4ffc_A 4-aminobutyrate aminotr 98.1 1.6E-05 5.6E-10 59.4 9.1 101 8-123 345-447 (453)
148 3n0l_A Serine hydroxymethyltra 98.1 8.5E-05 2.9E-09 54.2 12.6 103 8-123 278-387 (417)
149 3gju_A Putative aminotransfera 98.1 2.8E-05 9.5E-10 58.1 10.0 104 7-123 348-454 (460)
150 1b9h_A AHBA synthase, protein 98.0 3.9E-05 1.3E-09 55.6 9.6 107 7-124 249-387 (388)
151 2eo5_A 419AA long hypothetical 98.0 2.7E-05 9.1E-10 57.4 8.5 89 10-124 327-417 (419)
152 3mad_A Sphingosine-1-phosphate 98.0 8.4E-05 2.9E-09 56.2 10.7 92 7-123 372-467 (514)
153 4adb_A Succinylornithine trans 98.0 5.1E-05 1.8E-09 55.2 9.1 91 11-123 302-398 (406)
154 1mdo_A ARNB aminotransferase; 97.9 0.00015 5.2E-09 52.4 10.9 102 12-123 261-384 (393)
155 3ke3_A Putative serine-pyruvat 97.9 8.6E-05 3E-09 54.0 9.5 97 10-123 273-374 (379)
156 2oat_A Ornithine aminotransfer 97.9 9.1E-05 3.1E-09 55.1 9.7 90 12-123 344-437 (439)
157 3e9k_A Kynureninase; kynurenin 97.9 8.1E-05 2.8E-09 55.5 8.9 88 10-123 354-459 (465)
158 3dod_A Adenosylmethionine-8-am 97.8 8.9E-05 3E-09 55.1 8.7 101 8-123 339-441 (448)
159 4e77_A Glutamate-1-semialdehyd 97.8 0.00011 3.6E-09 54.2 8.9 105 8-124 322-428 (429)
160 3k40_A Aromatic-L-amino-acid d 97.8 0.00013 4.6E-09 54.9 9.5 97 8-123 369-469 (475)
161 2cjg_A L-lysine-epsilon aminot 97.8 7.4E-05 2.5E-09 55.7 7.7 88 12-124 352-447 (449)
162 1e5e_A MGL, methionine gamma-l 97.8 9.6E-05 3.3E-09 54.4 8.1 89 16-123 266-393 (404)
163 4e1o_A HDC, histidine decarbox 97.8 0.00017 5.8E-09 54.3 9.6 97 8-123 376-476 (481)
164 1s0a_A Adenosylmethionine-8-am 97.8 0.00015 5.2E-09 53.4 9.0 86 12-123 331-422 (429)
165 2pb2_A Acetylornithine/succiny 97.8 0.00017 5.9E-09 53.2 9.2 90 11-123 320-416 (420)
166 1z7d_A Ornithine aminotransfer 97.7 0.00015 5.1E-09 53.8 8.6 89 12-123 333-427 (433)
167 2a7v_A Serine hydroxymethyltra 97.7 0.00078 2.7E-08 51.2 12.2 100 10-123 333-439 (490)
168 2e7u_A Glutamate-1-semialdehyd 97.7 0.00011 3.7E-09 54.1 7.2 99 12-122 321-424 (424)
169 3l44_A Glutamate-1-semialdehyd 97.6 0.00027 9.3E-09 52.1 8.6 98 14-123 326-428 (434)
170 2fnu_A Aminotransferase; prote 97.6 0.00039 1.3E-08 49.9 9.2 105 8-123 244-370 (375)
171 3fq8_A Glutamate-1-semialdehyd 97.6 0.00039 1.3E-08 51.1 9.3 99 14-124 323-426 (427)
172 2epj_A Glutamate-1-semialdehyd 97.6 0.0002 6.8E-09 52.9 7.6 99 13-123 326-429 (434)
173 1js3_A DDC;, DOPA decarboxylas 97.6 0.00034 1.2E-08 52.5 8.6 97 7-123 371-472 (486)
174 4a6r_A Omega transaminase; tra 97.6 0.00035 1.2E-08 52.1 8.3 101 8-123 343-447 (459)
175 3mc6_A Sphingosine-1-phosphate 97.6 0.0011 3.9E-08 49.7 11.2 91 8-123 341-435 (497)
176 3a9z_A Selenocysteine lyase; P 97.5 0.00049 1.7E-08 50.5 8.3 103 7-123 301-426 (432)
177 3a8u_X Omega-amino acid--pyruv 97.5 0.00034 1.2E-08 51.8 7.4 92 13-124 350-446 (449)
178 2qma_A Diaminobutyrate-pyruvat 97.5 0.00064 2.2E-08 51.2 8.9 101 7-123 389-494 (497)
179 1ohv_A 4-aminobutyrate aminotr 97.5 0.00053 1.8E-08 51.6 8.3 88 12-124 375-470 (472)
180 3k28_A Glutamate-1-semialdehyd 97.5 0.0005 1.7E-08 50.7 7.9 102 11-124 320-426 (429)
181 2okj_A Glutamate decarboxylase 97.5 0.00066 2.3E-08 51.2 8.6 109 8-123 382-500 (504)
182 2cy8_A D-phgat, D-phenylglycin 97.4 0.00086 2.9E-08 49.7 8.6 98 12-123 325-433 (453)
183 2z67_A O-phosphoseryl-tRNA(SEC 97.4 0.0017 5.8E-08 48.5 9.9 96 7-122 345-455 (456)
184 3tfu_A Adenosylmethionine-8-am 97.3 0.0017 5.9E-08 48.5 8.9 85 13-123 361-451 (457)
185 2c81_A Glutamine-2-deoxy-scyll 97.3 0.0029 1E-07 46.3 9.9 105 9-123 264-412 (418)
186 2dgk_A GAD-beta, GADB, glutama 97.2 0.0028 9.7E-08 47.0 9.7 101 8-123 323-432 (452)
187 3i5t_A Aminotransferase; pyrid 97.2 0.002 6.9E-08 48.4 8.7 97 12-123 350-452 (476)
188 3ri6_A O-acetylhomoserine sulf 97.2 0.0031 1.1E-07 47.0 9.4 90 14-116 302-426 (430)
189 2oga_A Transaminase; PLP-depen 97.2 0.0015 5E-08 47.7 7.5 103 9-123 272-394 (399)
190 3dr4_A Putative perosamine syn 97.1 0.001 3.6E-08 48.1 6.5 103 9-122 266-390 (391)
191 3hbx_A GAD 1, glutamate decarb 97.0 0.0093 3.2E-07 45.1 10.8 98 10-123 340-442 (502)
192 2po3_A 4-dehydrase; external a 96.9 0.0088 3E-07 43.8 9.5 103 9-123 258-384 (424)
193 2x3l_A ORN/Lys/Arg decarboxyla 96.8 0.0024 8.3E-08 47.6 6.1 78 19-123 271-351 (446)
194 3uwc_A Nucleotide-sugar aminot 96.8 0.014 4.7E-07 41.8 9.8 104 9-124 246-370 (374)
195 3hmu_A Aminotransferase, class 96.8 0.0046 1.6E-07 46.5 7.2 96 13-123 347-450 (472)
196 3ndn_A O-succinylhomoserine su 96.6 0.015 5E-07 43.0 9.0 98 9-115 276-409 (414)
197 3e77_A Phosphoserine aminotran 96.6 0.033 1.1E-06 40.9 10.5 98 10-125 271-375 (377)
198 1ibj_A CBL, cystathionine beta 96.5 0.00063 2.1E-08 51.2 0.8 56 66-124 390-461 (464)
199 3vp6_A Glutamate decarboxylase 96.4 0.025 8.4E-07 42.9 9.4 106 7-122 384-502 (511)
200 3qm2_A Phosphoserine aminotran 96.2 0.085 2.9E-06 38.8 11.1 94 10-125 286-385 (386)
201 3m5u_A Phosphoserine aminotran 96.1 0.13 4.3E-06 37.5 11.2 94 10-125 259-360 (361)
202 2rfv_A Methionine gamma-lyase; 96.0 0.028 9.5E-07 40.8 7.6 38 68-106 326-379 (398)
203 1o69_A Aminotransferase; struc 95.9 0.061 2.1E-06 39.0 8.8 114 8-123 243-385 (394)
204 3bb8_A CDP-4-keto-6-deoxy-D-gl 95.6 0.18 6.2E-06 37.0 10.6 60 66-126 359-437 (437)
205 3b8x_A WBDK, pyridoxamine 5-ph 95.6 0.07 2.4E-06 38.4 8.2 100 8-118 266-389 (390)
206 2jis_A Cysteine sulfinic acid 95.4 0.078 2.7E-06 40.0 8.3 107 8-123 397-513 (515)
207 1cs1_A CGS, protein (cystathio 95.3 0.24 8.1E-06 35.7 10.1 96 9-123 247-381 (386)
208 2yky_A Beta-transaminase; tran 94.1 0.0036 1.2E-07 47.3 0.0 97 13-123 357-458 (465)
209 1qgn_A Protein (cystathionine 95.1 0.17 5.8E-06 37.8 9.0 100 10-123 310-443 (445)
210 3frk_A QDTB; aminotransferase, 95.0 0.042 1.4E-06 39.3 5.4 102 10-123 246-366 (373)
211 3cog_A Cystathionine gamma-lya 94.9 0.15 5E-06 37.4 8.0 24 97-122 372-395 (403)
212 3qhx_A Cystathionine gamma-syn 94.6 0.21 7.3E-06 36.3 8.4 96 13-122 265-391 (392)
213 1pff_A Methionine gamma-lyase; 93.2 0.34 1.2E-05 33.9 7.0 23 97-119 304-328 (331)
214 1gc0_A Methionine gamma-lyase; 92.9 1.7 5.9E-05 31.3 10.5 22 10-31 262-283 (398)
215 3nyt_A Aminotransferase WBPE; 92.4 0.41 1.4E-05 34.1 6.6 98 10-123 245-362 (367)
216 2cb1_A O-acetyl homoserine sul 92.1 2.6 8.7E-05 30.6 11.2 20 15-34 284-304 (412)
217 1n8p_A Cystathionine gamma-lya 90.3 2.4 8.1E-05 30.7 8.9 24 97-120 365-390 (393)
218 3ju7_A Putative PLP-dependent 88.4 1.4 4.8E-05 31.8 6.4 102 9-123 249-373 (377)
219 3nmy_A Xometc, cystathionine g 87.4 3.6 0.00012 30.0 8.1 89 12-112 266-389 (400)
220 4ao9_A Beta-phenylalanine amin 87.2 5.9 0.0002 29.7 9.3 42 68-123 403-444 (454)
221 4a0g_A Adenosylmethionine-8-am 84.8 3.8 0.00013 33.1 7.6 46 66-124 780-827 (831)
222 2fq6_A Cystathionine beta-lyas 82.0 5.7 0.00019 29.1 7.1 19 13-31 282-300 (415)
223 1c4k_A Protein (ornithine deca 81.4 19 0.00064 28.7 10.8 46 65-122 516-563 (730)
224 3acz_A Methionine gamma-lyase; 81.4 12 0.00043 26.7 9.1 25 97-123 363-387 (389)
225 4atq_A 4-aminobutyrate transam 80.8 15 0.00052 27.4 10.9 68 41-123 384-453 (456)
226 2ctz_A O-acetyl-L-homoserine s 76.3 9.9 0.00034 27.6 6.9 24 97-122 397-420 (421)
227 3ou5_A Serine hydroxymethyltra 72.7 29 0.001 26.4 11.0 100 9-122 332-438 (490)
228 2jo8_A Serine/threonine-protei 65.1 11 0.00039 19.4 3.6 23 7-29 27-49 (51)
229 3m0z_A Putative aldolase; MCSG 46.1 51 0.0017 22.6 5.3 72 22-122 177-248 (249)
230 4e3q_A Pyruvate transaminase; 44.4 97 0.0033 23.1 8.8 46 66-124 420-467 (473)
231 1ei7_A Coat protein; disordere 39.9 36 0.0012 21.7 3.6 33 18-50 38-75 (158)
232 3mlz_P HIV-1 GP120 third varia 39.5 16 0.00054 15.3 1.4 15 76-90 5-19 (25)
233 3m6y_A 4-hydroxy-2-oxoglutarat 38.0 74 0.0025 22.1 5.1 72 23-123 201-272 (275)
234 2v7f_A RPS19, RPS19E SSU ribos 37.5 33 0.0011 21.6 3.2 34 11-44 71-121 (150)
235 1lyp_A CAP18; lipopolysacchari 36.7 16 0.00054 16.2 1.1 19 13-31 2-20 (32)
236 2bp3_S Platelet glycoprotein I 35.3 17 0.0006 15.4 1.1 12 39-50 9-20 (26)
237 3kml_A Coat protein; permutant 33.8 52 0.0018 21.1 3.6 33 18-50 100-137 (161)
238 1kaf_A Transcription regulator 29.4 60 0.0021 19.3 3.2 28 23-51 67-94 (108)
239 3tqn_A Transcriptional regulat 28.8 33 0.0011 20.1 2.1 35 10-44 36-73 (113)
240 4ham_A LMO2241 protein; struct 28.4 33 0.0011 20.7 2.1 36 10-45 41-79 (134)
241 3neu_A LIN1836 protein; struct 27.7 35 0.0012 20.4 2.1 37 10-46 40-79 (125)
242 1cgm_E Cucumber green mottle m 26.6 27 0.00093 22.4 1.4 32 19-50 40-76 (161)
243 1use_A VAsp, vasodilator-stimu 26.5 67 0.0023 15.9 3.8 24 7-30 14-37 (45)
244 4drs_A Pyruvate kinase; glycol 24.4 77 0.0026 24.4 3.7 28 96-123 69-97 (526)
245 3ih6_A Putative zinc protease; 23.7 77 0.0026 19.8 3.3 51 68-123 58-109 (197)
246 3by6_A Predicted transcription 23.7 47 0.0016 19.9 2.1 36 10-45 38-76 (126)
247 3mly_P HIV-1 GP120 third varia 23.4 18 0.00062 14.8 0.1 14 77-90 5-18 (23)
248 3m3i_A Putative uncharacterize 23.0 51 0.0017 22.4 2.3 24 25-49 22-45 (225)
249 1rmv_A Ribgrass mosaic virus c 22.8 49 0.0017 21.1 2.0 32 19-50 40-76 (157)
250 3uji_P Envelope glycoprotein G 22.6 20 0.00067 14.7 0.1 14 77-90 5-18 (23)
251 3qtg_A Pyruvate kinase, PK; TI 21.9 83 0.0028 23.8 3.4 27 97-123 42-69 (461)
252 3gr4_A Pyruvate kinase isozyme 21.1 99 0.0034 23.9 3.8 28 96-123 87-115 (550)
253 3d3c_J 30S ribosomal protein S 21.0 1.3E+02 0.0043 17.1 3.5 27 98-124 9-36 (87)
254 3gwb_A Peptidase M16 inactive 20.8 74 0.0025 22.5 3.0 28 96-123 308-335 (434)
255 2ek5_A Predicted transcription 20.2 47 0.0016 20.1 1.5 35 10-44 31-68 (129)
256 3r2c_J Protein NUSE, 30S ribos 20.1 1.3E+02 0.0044 16.9 3.5 26 98-123 4-30 (83)
No 1
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.59 E-value=1.6e-14 Score=108.26 Aligned_cols=101 Identities=20% Similarity=0.303 Sum_probs=86.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC---CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 7 KCYFYTISEELRPKREILADALDKA---GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~---g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
+.|++++++.|+++++.+.+.|++. ++.+..|.||+|+|++++.. . +..+++..|+ ++||.+.|
T Consensus 339 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~~---~---------~~~~l~~~l~-~~gV~v~p 405 (448)
T 3aow_A 339 EKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDG---I---------DSKKMLERAI-KKGVAYVP 405 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECSTT---C---------CHHHHHHHHH-HTTEECEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcCCC---C---------CHHHHHHHHH-HCCcEEEc
Confidence 5789999999999999999999875 68888999999999999752 1 3668888876 56999999
Q ss_pred CCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 84 PSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 84 g~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
|+.|+... ..++++|++|+. +++++++++++|.++++
T Consensus 406 g~~f~~~~---~~~~~iRls~~~~~~e~i~~~~~~L~~~l~ 443 (448)
T 3aow_A 406 GEAFYAHR---DVKNTMRLNFTYVDEDKIMEGIKRLAETIK 443 (448)
T ss_dssp GGGGSTTC---CCCSEEEEECSSSCTHHHHHHHHHHHHHHH
T ss_pred chhhcCCC---CCCCEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 99997642 246899999997 78999999999998876
No 2
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.58 E-value=1e-14 Score=108.71 Aligned_cols=101 Identities=14% Similarity=0.166 Sum_probs=87.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
..|++++++.|+++++.+.+.|++.|+++..|++|+|+|++++ . . ++.+++..|+++.||.+.||+.
T Consensus 340 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~-~---~---------~~~~~~~~l~~~~gI~v~pg~~ 406 (449)
T 3qgu_A 340 LKEMNAMIKFYKENAQILKTTFTEMGFSVYGGDDAPYIWVGFP-G---K---------PSWDVFAEILERCNIVTTPGSG 406 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCEEESSSSSEEEEECT-T---S---------CHHHHHHHHHHHHCEECEEGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCeeEEEEECC-C---C---------CHHHHHHHHHHHCCEEEecchH
Confidence 4689999999999999999999988999989999999999998 2 2 3678888887667999999999
Q ss_pred cccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhcC
Q psy788 87 FYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNKN 125 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~~ 125 (126)
|+.. +++++||+++.+++++++++++|.++++++
T Consensus 407 f~~~-----~~~~iRis~~~~~e~i~~~l~~l~~~~~~~ 440 (449)
T 3qgu_A 407 YGPA-----GEGFVRASAFGSRENILEAVRRFKEAYGKR 440 (449)
T ss_dssp GCGG-----GTTEEEEECCSCHHHHHHHHHHHHHHHC--
T ss_pred hCCC-----CCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 9854 478999999889999999999999988754
No 3
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.57 E-value=1.3e-14 Score=107.04 Aligned_cols=120 Identities=31% Similarity=0.632 Sum_probs=91.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCccccccc-CCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 5 PDKCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRL-DTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 5 ~~~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
..+.|++++++.++++++.+.+.|+++|+.+..|++|+|+|++++......+. +...+...+.+++..++.+.||.+.|
T Consensus 301 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~ 380 (422)
T 3fvs_A 301 QPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIP 380 (422)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEE
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeC
Confidence 35679999999999999999999998899988999999999998752110000 00000001557888888788999999
Q ss_pred CCCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 84 PSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 84 g~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
|+.|+.......+.+++|++|+.+++++++++++|.+++++
T Consensus 381 g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 381 VSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp GGGGSCHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred cHHhcCCcCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 99997531101257899999999999999999999988753
No 4
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.56 E-value=2.6e-14 Score=106.88 Aligned_cols=113 Identities=29% Similarity=0.590 Sum_probs=86.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCC-----CCCchhhHHHHHHHHHhCCeeE
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDT-----ESDKYEDFKFAKWMTKNVKLQG 81 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~gV~v 81 (126)
+.|++++++.|+++++.+.+.|+++|+++..|+||+|+|++++... .+... ..+..++.+++.+|+.++||.+
T Consensus 326 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~--~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v 403 (447)
T 3b46_A 326 IGYFEKMRQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDFSKVK--IPEDYPYPEEILNKGKDFRISHWLINELGVVA 403 (447)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECTTCC--CCTTCCCCGGGSSSCHHHHHHHHHHHHTCEEC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEeccccc--CccccccccccccCCCHHHHHHHHHHhCCEEE
Confidence 5789999999999999999999988888889999999999997521 00000 0000135688888877789999
Q ss_pred eCCCCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHh
Q psy788 82 IPPSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTW 121 (126)
Q Consensus 82 ~pg~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~ 121 (126)
.||+.|+.......+++++|++++.++++|++++++|.++
T Consensus 404 ~pg~~f~~~~~~~~~~~~iRls~~~~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 404 IPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERLKLL 443 (447)
T ss_dssp BCGGGGSCGGGGGGGTTEEEEECCSCHHHHHHHHHHGGGG
T ss_pred ECchHhCCCCccCCCCCEEEEEEeCCHHHHHHHHHHHHHH
Confidence 9999998542100126899999999899999999999874
No 5
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.56 E-value=3.3e-14 Score=105.46 Aligned_cols=99 Identities=13% Similarity=0.173 Sum_probs=86.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
..|++.+++.|+++++.+.+.|.++|+++..|.+|+|+|++++.. ++.+++..|+.+.||.+.||+.
T Consensus 328 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ll~~~gv~v~~g~~ 394 (432)
T 3ei9_A 328 LEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQ-------------SSWDVFAEILEKTHVVTTPGSG 394 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCEEECSSSSEEEEECTTS-------------CHHHHHHHHHHHHCEECEEGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEEECCCC-------------CHHHHHHHHHHHCCEEEeCchH
Confidence 468999999999999999999998888888889999999999832 3667888887778999999999
Q ss_pred cccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 87 FYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
|+.. +++++|++++.+.+++++++++|.+..+
T Consensus 395 f~~~-----~~~~iRis~~~~~e~l~~~l~rl~~~~~ 426 (432)
T 3ei9_A 395 FGPG-----GEGFVRVSAFGHRENILEACRRFKQLYK 426 (432)
T ss_dssp GCGG-----GTTEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred hCCC-----CCCEEEEEecCCHHHHHHHHHHHHHHhh
Confidence 9854 4789999998899999999999987655
No 6
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.55 E-value=2.5e-14 Score=106.79 Aligned_cols=99 Identities=11% Similarity=0.052 Sum_probs=82.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhC-CCcc--------------cCCCcceEEEEeeCCcccccccCCCCCchhhHHHH
Q psy788 6 DKCYFYTISEELRPKREILADALDKA-GMVP--------------VIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFA 70 (126)
Q Consensus 6 ~~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~--------------~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 70 (126)
.++|++++++.|+++++.+.+.|+++ |+.+ ..|+||+|+|++++.. +.+++
T Consensus 311 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~--------------~~~~~ 376 (427)
T 2hox_A 311 MRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWE--------------EDKDC 376 (427)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSG--------------GGCSH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCCc--------------HHHHH
Confidence 35788999999999999999999886 5443 3578899999999741 33566
Q ss_pred HHHHHhCCeeEeCCCCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 71 KWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 71 ~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
..++.+.||.+.||+.|+. +++++|+||+.+++++++++++|.+++++
T Consensus 377 ~~ll~~~gI~v~pg~~f~~------~~~~~Ris~~~~~e~l~~~l~~l~~~~~~ 424 (427)
T 2hox_A 377 YQTFQNGRINTQNGVGFEA------SSRYVRLSLIKTQDDFDQLMYYLKDMVKA 424 (427)
T ss_dssp HHHHHHTTEECEEGGGGTS------CTTEEEEECSSCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHCCEEEcCCCccCC------CCCEEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 7777789999999999975 36899999999889999999999998875
No 7
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.54 E-value=3.3e-14 Score=104.42 Aligned_cols=117 Identities=44% Similarity=0.811 Sum_probs=88.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 4 APDKCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 4 ~~~~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
...+.|++++++.++++++.+.+.|+++|+.+..|++|+|+|++++.....++. ...+..++.+++..++.+.||.+.|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~gv~v~~ 371 (410)
T 3e2y_A 293 DDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSD-MNSDEPYDYKFVKWMTKHKKLTAIP 371 (410)
T ss_dssp TSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECGGGCCCCTT-CCSSCCHHHHHHHHHHHHHSEECEE
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCccEEEEEEchhhhccccc-ccccccCHHHHHHHHHHHcCEEEeC
Confidence 345679999999999999999999998899989999999999999753211110 0001112457888877788999999
Q ss_pred CCCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHh
Q psy788 84 PSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTW 121 (126)
Q Consensus 84 g~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~ 121 (126)
|+.|+.......+.+++||+|+.+++++++++++|.++
T Consensus 372 g~~f~~~~~~~~~~~~iRis~~~~~e~l~~~l~~l~~~ 409 (410)
T 3e2y_A 372 VSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEIFRAW 409 (410)
T ss_dssp GGGGSCTTTHHHHTTEEEEECCCCHHHHHHHHHHHHTC
T ss_pred chhhCCCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHhc
Confidence 99997531000136899999999999999999999764
No 8
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.54 E-value=8.1e-14 Score=102.80 Aligned_cols=101 Identities=18% Similarity=0.278 Sum_probs=87.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
+.|++++++.++++++.+.+.|+++|+++..|+||+|+|++++.. . +..+++..|+.+.||.+.||+.
T Consensus 302 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~---~---------~~~~l~~~l~~~~gi~v~~g~~ 369 (404)
T 2o1b_A 302 DDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAKGGIYVWLETPPG---Y---------DSEQFEQFLVQEKSILVAPGKP 369 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCEECCCBSSEEEEECCTT---C---------CHHHHHHHHHHHHCEECEESGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCCcceEEEEeCCCC---C---------CHHHHHHHHHHHCCEEEeCchh
Confidence 578999999999999999999998888888899999999999742 1 3567888877678999999999
Q ss_pred cccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 87 FYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
|+.. .++++|++++.+++++++++++|.+++++
T Consensus 370 f~~~-----~~~~iRis~~~~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 370 FGEN-----GNRYVRISLALDDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp GCGG-----GTTEEEEECCSCTTHHHHHHHHHHGGGGG
T ss_pred hCcC-----CCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 9753 36899999998888999999999988764
No 9
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.54 E-value=2.8e-14 Score=104.48 Aligned_cols=100 Identities=18% Similarity=0.391 Sum_probs=84.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 6 DKCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 6 ~~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
...|++++++.|+++++.+.+.|+++|+++..|+||||+|++++..+ . +..+++..|. ++||.+.||+
T Consensus 285 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~--~---------~~~~l~~~l~-~~gv~v~~g~ 352 (385)
T 1b5p_A 285 SRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIA--P---------DEVRAAERLL-EAGVAVVPGT 352 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBTTEEEEECTTTC--S---------SHHHHHHHHH-HTTEECEESG
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecCCCC--C---------CHHHHHHHHH-HCCeEEeccc
Confidence 45789999999999999999999888888889999999999997422 1 3668888876 8899999999
Q ss_pred CcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 86 AFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
.|+. ++++|+||+.+++.+++++++|.+++++
T Consensus 353 ~f~~-------~~~iRis~~~~~~~i~~~l~~l~~~l~~ 384 (385)
T 1b5p_A 353 DFAA-------FGHVRLSYATSEENLRKALERFARVLGR 384 (385)
T ss_dssp GGTC-------TTEEEEECCSCHHHHHHHHHHGGGGC--
T ss_pred ccCC-------CCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 9963 4799999999889999999999887653
No 10
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.53 E-value=1.3e-13 Score=100.26 Aligned_cols=104 Identities=14% Similarity=0.142 Sum_probs=89.3
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhC--CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCee
Q psy788 3 TAPDKCYFYTISEELRPKREILADALDKA--GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQ 80 (126)
Q Consensus 3 ~~~~~~~l~~~r~~~~~r~~~l~~~l~~~--g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~ 80 (126)
+...++|++++++.++++++.+.+.|++. ++++..|+|++++|++++..+ . +..+++..|+++.||.
T Consensus 277 l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~l~~~~gi~ 345 (383)
T 3kax_A 277 YTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSALN--L---------SQDERTKLLEEKGKII 345 (383)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGGC--C---------CHHHHHHHHHHTSCEE
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCceEEEEEEccccC--C---------CHHHHHHHHHhhCCEE
Confidence 44557889999999999999999999984 799999999999999998532 1 3678888876678999
Q ss_pred EeCCCCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhh
Q psy788 81 GIPPSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWR 122 (126)
Q Consensus 81 v~pg~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~ 122 (126)
+.||+.|+.. ..+++|++++.+++++++++++|.+++
T Consensus 346 v~~g~~~~~~-----~~~~iRi~~~~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 346 VEPGEKYGLG-----GEEHIGINIGCPRSVLEEILNRLRHTF 382 (383)
T ss_dssp CEESGGGCTT-----CTTEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred eECchhhcCC-----CCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 9999999864 478999999998899999999998876
No 11
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.52 E-value=6.2e-14 Score=106.53 Aligned_cols=111 Identities=12% Similarity=0.126 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 9 YFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
+++.+++.|+++++.+.+.|+++ |+++..|+||||+|++++.....+.........++..++..++.+.||.+.||+.|
T Consensus 380 ~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f 459 (498)
T 3ihj_A 380 EKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGF 459 (498)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCccc
Confidence 34678899999999999999988 89999999999999987532100000000000123333666777899999999999
Q ss_pred ccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 88 YSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
+.. .+++++|++|+.+++++++++++|.++++
T Consensus 460 ~~~----~~~~~~Ris~~~~~e~l~~~i~~L~~~~~ 491 (498)
T 3ihj_A 460 GQR----EGTYHFRMTILPPVEKLKTVLQKVKDFHI 491 (498)
T ss_dssp CCC----TTCCBEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred CCC----CCCCEEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 863 25789999998889999999999998876
No 12
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.52 E-value=1.2e-13 Score=102.50 Aligned_cols=103 Identities=17% Similarity=0.225 Sum_probs=83.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC--CC-cccCCCcceEEEEeeCCcccccccCCCCCchhhHH-HHHHHHHhCCeeEe
Q psy788 7 KCYFYTISEELRPKREILADALDKA--GM-VPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFK-FAKWMTKNVKLQGI 82 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~--g~-~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~gV~v~ 82 (126)
++|++++++.|+++++.+.+.|+++ ++ .+..|.||+|+|++++... ++.+ +.+. +.++||.+.
T Consensus 316 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~------------~~~~~~~~~-l~~~gv~v~ 382 (425)
T 2r2n_A 316 MAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGIN------------DVKELIEEK-AVKMGVLML 382 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCS------------CCHHHHHTH-HHHTTEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCC------------CHHHHHHHH-HHHCCcEEe
Confidence 4789999999999999999999884 66 5678999999999998631 2445 4555 458999999
Q ss_pred CCCCcccCcccCCCCCeEEEEee-CChhHHHHHHHHHHHhhhc
Q psy788 83 PPSAFYSDEHKHLGENLIRYCFF-KKDETLREASSILQTWRNK 124 (126)
Q Consensus 83 pg~~f~~~~~~~~~~~~~Rl~~~-~~~e~i~~~~~~l~~~~~~ 124 (126)
||+.|+.... .+.+++|++|+ .+++++++++++|.+++++
T Consensus 383 pg~~f~~~~~--~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 383 PGNAFYVDSS--APSPYLRASFSSASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp EGGGGSSSTT--SCCCEEEEECSSCCHHHHHHHHHHHHHHHHH
T ss_pred chhhhcCCCC--CCCCEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 9999985410 13589999998 5899999999999988764
No 13
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.50 E-value=1.9e-13 Score=101.21 Aligned_cols=118 Identities=56% Similarity=1.102 Sum_probs=88.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
+.|++++++.++++++.+.+.|.++|+++..|++|+|+|++++......+.+......+..+++..|+.++||.+.||+.
T Consensus 311 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~ 390 (429)
T 1yiz_A 311 ECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSA 390 (429)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHTCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchH
Confidence 67999999999999999999998888888889999999999975210000000000013567888877689999999999
Q ss_pred cccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 87 FYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
|+.......+.+++|++++.+++++++++++|.+++++
T Consensus 391 f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 428 (429)
T 1yiz_A 391 FYSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKWKGS 428 (429)
T ss_dssp GSCGGGGGGTTTEEEEECCSCHHHHHHHHHHHHHHSCC
T ss_pred hCCCcccCCCCCeEEEEecCCHHHHHHHHHHHHHhccC
Confidence 87531000126899999999899999999999988754
No 14
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.50 E-value=9.3e-14 Score=102.45 Aligned_cols=105 Identities=19% Similarity=0.349 Sum_probs=87.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 5 PDKCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 5 ~~~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
..++|++++++.++++++.+.+.|+++|+++..|+||+|+|++++.. +. ..+..+++..|++++||.+.||
T Consensus 292 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~---~~------~~~~~~~~~~l~~~~gi~v~~g 362 (412)
T 2x5d_A 292 GDQQCVRDIARQYQQRRDVLVKGLREAGWMVENPKASMYVWAKIPEP---YA------HLGSLEFAKKLLQDAKVSVSPG 362 (412)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCSBSSEEEEECCTT---TG------GGCHHHHHHHHHHHHCEECEEG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCeeeEEEEEcCCc---cC------CCCHHHHHHHHHHHCCEEEeCc
Confidence 33578999999999999999999988888888899999999999642 10 0025678888766689999999
Q ss_pred CCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 85 SAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
+.|+.. +++++|++++.+++++++++++|.++++
T Consensus 363 ~~f~~~-----~~~~iRis~~~~~~~l~~~l~~l~~~l~ 396 (412)
T 2x5d_A 363 IGFGDY-----GDDHVRFALIENRDRLRQAVRGIKAMFR 396 (412)
T ss_dssp GGGCGG-----GTTEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred hhhCCC-----CCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 999643 3689999999988999999999998876
No 15
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.50 E-value=1.7e-13 Score=100.31 Aligned_cols=104 Identities=18% Similarity=0.338 Sum_probs=87.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCc-ccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 6 DKCYFYTISEELRPKREILADALDKAGMV-PVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 6 ~~~~l~~~r~~~~~r~~~l~~~l~~~g~~-~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
...+++++++.++++++.+.+.|+++++. +..|+||+|+|++++... . +..+++..|+++.||.+.||
T Consensus 277 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~l~~~~gi~v~~g 345 (391)
T 3h14_A 277 CDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLT--D---------DSRAFAAEILEKAGVAVTPG 345 (391)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTC--S---------CHHHHHHHHHHHHCEECEEG
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccC--C---------CHHHHHHHHHHHCCEEEcCc
Confidence 56799999999999999999999887644 468999999999997532 1 36788888776679999999
Q ss_pred CCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 85 SAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
+.|+.. ..++++|++++.+++++++++++|.+++++
T Consensus 346 ~~~~~~----~~~~~iRis~~~~~~~i~~~l~~l~~~~~~ 381 (391)
T 3h14_A 346 LDFDPE----RGAGTLRFSYARATADIEEGLDRLEAFMQA 381 (391)
T ss_dssp GGTCTT----TGGGEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred hhhCCC----CCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 999863 146899999999889999999999998874
No 16
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.50 E-value=1e-13 Score=100.73 Aligned_cols=99 Identities=19% Similarity=0.301 Sum_probs=85.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 6 DKCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 6 ~~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
.+.|++++++.++++++.+.+.|+++|+++..|+||+|+|++++. +..+++..|++++||.+.||+
T Consensus 271 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~~~gi~v~~g~ 336 (370)
T 2z61_A 271 TEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYVFPNIGE--------------DGREFAYKLLKEKFVALTPGI 336 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCCCBTTEECCBCSS--------------CHHHHHHHHHHHHCEECEEGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCcceEEEEecCC--------------CHHHHHHHHHHhCCEEEeCch
Confidence 467899999999999999999998888888889999999998874 155788887657899999999
Q ss_pred CcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 86 AFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
.|+.. +++++|++++.+++++++++++|.++++
T Consensus 337 ~f~~~-----~~~~~Ri~~~~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 337 GFGSK-----GKNYIRISYANSYENIKEGLERIKEFLN 369 (370)
T ss_dssp GGCGG-----GSSBEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred hhCCC-----CCCEEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 99752 3689999999988999999999998775
No 17
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.50 E-value=1.3e-13 Score=104.71 Aligned_cols=112 Identities=14% Similarity=0.194 Sum_probs=84.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 8 CYFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
.+++.+++.|+++++.+.+.|+++ |+++..|+||||+|+++......++........++..++..++.+.||.++||+.
T Consensus 380 ~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~ 459 (500)
T 3tcm_A 380 AEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSG 459 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcc
Confidence 567889999999999999999988 8999999999999977652110000000000012445566677789999999999
Q ss_pred cccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 87 FYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
|+.. .+++++|++|+.+++++++++++|.++++
T Consensus 460 f~~~----~g~~~iRis~~~~~e~i~~~i~~l~~~~~ 492 (500)
T 3tcm_A 460 FGQV----PGTWHFRCTILPQEDKIPAVISRFTVFHE 492 (500)
T ss_dssp TCCC----TTCCBEEEESCSCTTTHHHHHHHHHHHHH
T ss_pred cCCC----CCCCEEEEEECCCHHHHHHHHHHHHHHHH
Confidence 9863 25789999999888899999999988765
No 18
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.50 E-value=2.3e-13 Score=99.76 Aligned_cols=106 Identities=15% Similarity=0.225 Sum_probs=90.2
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeE
Q psy788 3 TAPDKCYFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQG 81 (126)
Q Consensus 3 ~~~~~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v 81 (126)
+...+.|+++.++.++++++.+.+.|+++ ++.+..|++|+|+|++++... . +..+++..|+++.||.+
T Consensus 298 l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~l~~~~gi~v 366 (407)
T 3nra_A 298 FDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLA--V---------APAEFVKILRLQAGVVV 366 (407)
T ss_dssp TCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBS--S---------CHHHHHHHHHHHHCEEC
T ss_pred HhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCC--C---------CHHHHHHHHHHhCCEEE
Confidence 44556789999999999999999999988 789889999999999998532 1 36688888766679999
Q ss_pred eCCCCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 82 IPPSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 82 ~pg~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
.||+.|+.. .++++|++++.+.+++++++++|.+++++
T Consensus 367 ~~g~~~~~~-----~~~~iRis~~~~~~~i~~~~~~l~~~~~~ 404 (407)
T 3nra_A 367 TPGTEFSPH-----TADSVRLNFSQDHEAAVAAARRIVTLVER 404 (407)
T ss_dssp EEGGGTCTT-----CTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred eCchhhCCC-----CCCEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 999999853 57899999999899999999999988763
No 19
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.49 E-value=2.1e-13 Score=99.69 Aligned_cols=102 Identities=16% Similarity=0.201 Sum_probs=85.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
+.|+.++++.++++++.+.+.|.+. +.+..|+||+|+|++++.. ++.+++..|++++||.+.||+.
T Consensus 293 ~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~l~~~~gi~v~~g~~ 358 (396)
T 3jtx_A 293 EQHVIDNRRLYQEKFERVIPILQQV-FDVKLPDASFYIWLKVPDG-------------DDLAFARNLWQKAAIQVLPGRF 358 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTT-SCCCCCSSSSEEEEECTTS-------------CHHHHHHHHHHHHCEECEEGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCccCCCeeEEEEEECCCC-------------CHHHHHHHHHHHCCEEEeCChH
Confidence 4689999999999999999999876 6677899999999999852 3668888887778999999999
Q ss_pred cccCcc-cCCCCCeEEEEeeCChhHHHHHHHHHHHhh
Q psy788 87 FYSDEH-KHLGENLIRYCFFKKDETLREASSILQTWR 122 (126)
Q Consensus 87 f~~~~~-~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~ 122 (126)
|+.+.. ...+++++|++++.+++++++++++|.+++
T Consensus 359 ~~~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 359 LARDTEQGNPGEGYVRIALVADVATCVKAAEDIVSLY 395 (396)
T ss_dssp GCCCCTTCCTTTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred hCCcccccCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 986310 012468999999999999999999998875
No 20
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.49 E-value=6.9e-14 Score=103.58 Aligned_cols=103 Identities=14% Similarity=0.211 Sum_probs=88.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 5 PDKCYFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 5 ~~~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
..++|++++++.++++++.+.+.|+++ ++.+..|+|+|++|++++..+ . +..++...|+++.||.+.|
T Consensus 317 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~--~---------~~~~l~~~l~~~~gi~v~~ 385 (421)
T 3l8a_A 317 YGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYA--I---------AQPQLSEKLQNEAKVVLND 385 (421)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGT--C---------CTTHHHHHHHHTTCEECEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccC--C---------CHHHHHHHHHHhCCEEEEC
Confidence 356789999999999999999999986 899999999999999998532 1 3557888877678999999
Q ss_pred CCCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 84 PSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 84 g~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
|+.|+.. +++++|++++.+++++++++++|.++++
T Consensus 386 g~~f~~~-----~~~~iRi~~~~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 386 GAHFGKE-----GKYFARLNVATPKNTVQEALSRIISVFG 420 (421)
T ss_dssp GGGGCGG-----GTTEEEEECCSCHHHHHHHHHHHHHHC-
T ss_pred chhhCCC-----CCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 9999754 4789999999999999999999998775
No 21
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.49 E-value=1.4e-13 Score=100.48 Aligned_cols=99 Identities=23% Similarity=0.395 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcc
Q psy788 9 YFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFY 88 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~ 88 (126)
|++++++.++++++.+.+.|+++|+++..|+||+|+|++++..+ . +..+++..|+.++||.+.||+.|+
T Consensus 286 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~l~~~~gi~v~~g~~~~ 354 (389)
T 1gd9_A 286 AVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTG--L---------TSKKFSELMLKEARVAVVPGSAFG 354 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEECCBCGGGT--C---------CHHHHHHHHHHHTCEECEEGGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEeccCCC--C---------CHHHHHHHHHHhCCEEEeCchhhC
Confidence 89999999999999999999988888888999999999987421 1 366788887658899999999997
Q ss_pred cCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 89 SDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 89 ~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
.. +++++|++++.+++++++++++|.++++
T Consensus 355 ~~-----~~~~iRi~~~~~~~~i~~~l~~l~~~~~ 384 (389)
T 1gd9_A 355 KA-----GEGYVRISYATAYEKLEEAMDRMERVLK 384 (389)
T ss_dssp GG-----GTTBEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred CC-----CCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 53 3689999999988999999999998876
No 22
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.49 E-value=1.2e-13 Score=105.83 Aligned_cols=112 Identities=13% Similarity=0.106 Sum_probs=86.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCC----CCchhhHHHHHHHHHhCCee
Q psy788 5 PDKCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTE----SDKYEDFKFAKWMTKNVKLQ 80 (126)
Q Consensus 5 ~~~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~gV~ 80 (126)
+.+.|++++++.|+++++.+.+.|. .++.+..|+||||+|++++........... .+..++.+++..++.+.||.
T Consensus 407 ~~~~~~~~~~~~~~~r~~~l~~~L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~ 485 (533)
T 3f6t_A 407 SDDPYIDIARKLVSERYDQLHDAMQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVV 485 (533)
T ss_dssp TBCHHHHHHHHHHHHHHHHHHHHHT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSS
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEE
Confidence 3568999999999999999999997 788888999999999999742100000000 00002457777778889999
Q ss_pred EeCCCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 81 GIPPSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 81 v~pg~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
+.||+.|+. +++++|++|+. +++++++++++|.++++
T Consensus 486 v~pg~~f~~------~~~~iRls~a~~~~e~i~~~i~~L~~~l~ 523 (533)
T 3f6t_A 486 LVDGVGFGA------KPGELRVSQANLPTEDYALIGKQVLELLK 523 (533)
T ss_dssp SCTTEEECS------STTEEEEESSSSCHHHHHHHHHHHHHHHH
T ss_pred EeCCcccCC------CCCEEEEEEeeCCHHHHHHHHHHHHHHHH
Confidence 999999985 36799999996 89999999999998875
No 23
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.49 E-value=6.1e-14 Score=101.87 Aligned_cols=102 Identities=17% Similarity=0.185 Sum_probs=86.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhC--CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 6 DKCYFYTISEELRPKREILADALDKA--GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 6 ~~~~l~~~r~~~~~r~~~l~~~l~~~--g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
.+.|++++++.++++++.+.+.|++. ++++..|+||+++|++++..+ .+.+++..++++.||.+.|
T Consensus 272 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~~gi~v~~ 339 (377)
T 3fdb_A 272 GTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTT------------IEGSPSEFFIEKAKVAMND 339 (377)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSC------------CCSCHHHHHHHHHCEECEE
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccC------------CCHHHHHHHHHhCCEEecC
Confidence 35789999999999999999999984 899999999999999998632 1235667777667999999
Q ss_pred CCCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 84 PSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 84 g~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
|+.|+.. .++++|++++.+++++++++++|.+++++
T Consensus 340 g~~~~~~-----~~~~~Ris~~~~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 340 GAWFGED-----GTGFCRLNFATSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp GGGGCGG-----GTTEEEEECCSCHHHHHHHHHHHHHHHTT
T ss_pred ChhccCC-----CCCEEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 9999864 46899999999899999999999998764
No 24
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.48 E-value=2.5e-13 Score=99.23 Aligned_cols=101 Identities=32% Similarity=0.621 Sum_probs=84.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
+.|++++++.++++++.+.+.|++.|+++..|+||+|+|++++.... . +..+++..|+.++||.+.||+.
T Consensus 285 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~-~---------~~~~~~~~l~~~~gi~v~~g~~ 354 (386)
T 1u08_A 285 PEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVST-L---------DDVEFCQWLTQEHGVAAIPLSV 354 (386)
T ss_dssp THHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCBSSEEEEECTTTCC-S---------CHHHHHHHHHHHSCEECEEGGG
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCceEEEEEecCCCCC-C---------CHHHHHHHHHHhCCEEEeCchH
Confidence 57899999999999999999998888888889999999999975210 1 3667888877678999999999
Q ss_pred cccCcccCCCCCeEEEEeeCChhHHHHHHHHHHH
Q psy788 87 FYSDEHKHLGENLIRYCFFKKDETLREASSILQT 120 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~ 120 (126)
|+... .+++++|++++.+++++++++++|.+
T Consensus 355 f~~~~---~~~~~iRis~~~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 355 FCADP---FPHKLIRLCFAKKESTLLAAAERLRQ 385 (386)
T ss_dssp GCSSC---CCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred hCCCC---CCCCEEEEEEcCCHHHHHHHHHHHhh
Confidence 97531 24689999999988999999999864
No 25
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.48 E-value=2e-13 Score=99.42 Aligned_cols=103 Identities=14% Similarity=0.190 Sum_probs=89.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHh-C-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 6 DKCYFYTISEELRPKREILADALDK-A-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 6 ~~~~l~~~r~~~~~r~~~l~~~l~~-~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
.+.|++++++.++++++.+.+.|++ + ++.+..|++|+++|++++..+ . +..+++..|+++.||.+.|
T Consensus 284 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~l~~~~gi~v~~ 352 (391)
T 3dzz_A 284 GHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALG--M---------NAEDFCKYLREKTGLIISA 352 (391)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGC--S---------CHHHHHHHHHHHHCEECEE
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcC--C---------CHHHHHHHHHHhCCEEEeC
Confidence 4578999999999999999999998 4 899999999999999998532 1 3678888876688999999
Q ss_pred CCCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 84 PSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 84 g~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
|+.|+.. +++++|++++.+++++++++++|.+++++
T Consensus 353 g~~~~~~-----~~~~iRis~~~~~~~i~~~l~~l~~~l~~ 388 (391)
T 3dzz_A 353 GNGYRGN-----GHEFVRINLACPKELVIDGMQRLKQGVLN 388 (391)
T ss_dssp SGGGCTT-----GGGEEEEECCSCHHHHHHHHHHHHHHHHT
T ss_pred chhhCCC-----CCCEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 9999864 46899999999889999999999998764
No 26
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.47 E-value=5e-13 Score=99.24 Aligned_cols=107 Identities=21% Similarity=0.295 Sum_probs=87.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
+.|++++++.++++++.+.+.|.+.|+++..|+||+|+|++++.... .....+..+++..|+++.||.+.||+.
T Consensus 324 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~l~~~~~------~~~~~~~~~~~~~l~~~~gi~v~~g~~ 397 (435)
T 3piu_A 324 KNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLR------SNTFEAEMELWKKIVYEVHLNISPGSS 397 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCEECCCCSSSEEEEECGGGSS------SSSHHHHHHHHHHHHHTSCEECEEGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEEcccccc------cCCchhHHHHHHHHHHHCCEEEeCCcc
Confidence 34778999999999999999999888999899999999999985310 000012457888887666999999999
Q ss_pred cccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhhc
Q psy788 87 FYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRNK 124 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~~ 124 (126)
|+.. +++++||+++. +++++++++++|.+++++
T Consensus 398 ~~~~-----~~~~iRi~~~~~~~e~i~~~l~~l~~~l~~ 431 (435)
T 3piu_A 398 CHCT-----EPGWFRVCFANLPERTLDLAMQRLKAFVGE 431 (435)
T ss_dssp GTCS-----STTEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred cCCC-----CCCEEEEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 9764 47899999997 899999999999988763
No 27
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.47 E-value=2.5e-13 Score=98.95 Aligned_cols=102 Identities=17% Similarity=0.213 Sum_probs=86.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHh-C-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 6 DKCYFYTISEELRPKREILADALDK-A-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 6 ~~~~l~~~r~~~~~r~~~l~~~l~~-~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
.+.|++++++.++++++.+.+.|++ . ++.+..|+|++++|++++... . +..+++..|.++.||.+.|
T Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~l~~~~gi~v~~ 356 (391)
T 4dq6_A 288 GESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALG--L---------SDEELESILVQKGKVALNQ 356 (391)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGGC--C---------CHHHHHHHHHHTTCEECEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhcC--C---------CHHHHHHHHHHhCCEEeeC
Confidence 4578999999999999999999988 4 799999999999999998521 1 3678888876444999999
Q ss_pred CCCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 84 PSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 84 g~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
|+.|+.. +.+++|++++.+++++++++++|.++++
T Consensus 357 g~~~~~~-----~~~~iRis~~~~~~~i~~~l~~l~~~l~ 391 (391)
T 4dq6_A 357 GNSFGIG-----GSGYQRINLACPRSMLEEALIRIKNAIN 391 (391)
T ss_dssp GGGGCTT-----CTTEEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred chhhCCC-----CCCeEEEEEcCCHHHHHHHHHHHHHHhC
Confidence 9999863 4689999999988999999999988763
No 28
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.47 E-value=4.1e-13 Score=99.73 Aligned_cols=105 Identities=18% Similarity=0.317 Sum_probs=87.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 6 DKCYFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 6 ~~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
...|+.++++.++++++.+.+.|+++ |+.+..|+||+|+|++++... ++ . ..++.+++..|+++.||.+.||
T Consensus 318 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~--~~--~---~~~~~~~~~~l~~~~gV~v~~g 390 (427)
T 3dyd_A 318 PGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEH--FP--E---FENDVEFTERLVAEQSVHCLPA 390 (427)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGG--CT--T---CSSHHHHHHHHHHHHCEECEEG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhh--cC--C---CCCHHHHHHHHHHHCCEEEECC
Confidence 35789999999999999999999988 888889999999999987421 00 0 0135678888877899999999
Q ss_pred CCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 85 SAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
+.|+. ++++|++++.+++++++++++|.+++++
T Consensus 391 ~~~~~-------~~~iRis~~~~~e~i~~~l~~l~~~l~~ 423 (427)
T 3dyd_A 391 TCFEY-------PNFIRVVITVPEVMMLEACSRIQEFCEQ 423 (427)
T ss_dssp GGGTC-------TTEEEEESCSCHHHHHHHHHHHHHHHHH
T ss_pred cccCC-------CCeEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 99863 5799999998899999999999988764
No 29
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.47 E-value=3.6e-13 Score=98.05 Aligned_cols=100 Identities=16% Similarity=0.215 Sum_probs=84.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 4 APDKCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 4 ~~~~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
...+.|++++++.++++++.+.+.|+++ +.+..|++|+|+|++++.. . +..+++..|. ++||.+.|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~l~-~~gi~v~~ 341 (376)
T 2dou_A 276 KTPKEVVRGYARVYRERALGMAEALKGV-LSLLPPRATMYLWGRLPEG---V---------DDLEFGLRLV-ERGVALAP 341 (376)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHTTT-SEECCCCBSSEEEEECCTT---C---------CHHHHHHHHH-HTTEECEE
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHHHHHh-cCccCCCeeEEEEEECCCC---C---------CHHHHHHHHH-HCCEEEcC
Confidence 3346799999999999999999999987 7778899999999999752 1 3567888876 55999999
Q ss_pred CCCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhh
Q psy788 84 PSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWR 122 (126)
Q Consensus 84 g~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~ 122 (126)
|+.|+.. .++++|++++.+++++++++++|.+++
T Consensus 342 g~~f~~~-----~~~~~Ris~~~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 342 GRGFGPG-----GKGFVRIALVRPLEELLEAAKRIREAL 375 (376)
T ss_dssp GGGGCGG-----GTTEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred chhhCCC-----CCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 9999743 368999999988899999999998765
No 30
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.46 E-value=8.4e-13 Score=96.52 Aligned_cols=102 Identities=16% Similarity=0.185 Sum_probs=86.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHh-C-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 7 KCYFYTISEELRPKREILADALDK-A-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~-~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
++|++++++.++++++.+.+.|++ + ++.+..|+|||++|++++..+ . +..+++..|..++||.+.||
T Consensus 285 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~l~~~l~~~~gi~v~~g 353 (390)
T 1d2f_A 285 APWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLN--I---------DDNALQKALIEQEKVAIMPG 353 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGC--C---------CHHHHHHHHHHTTCEECEEG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEccccC--C---------CHHHHHHHHHHHcCEEeeCc
Confidence 578999999999999999999998 5 788889999999999997521 1 35678888765789999999
Q ss_pred CCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 85 SAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
+.|+.. .++++|++++.+++++++++++|.+++++
T Consensus 354 ~~f~~~-----~~~~~Ris~~~~~~~l~~~l~~l~~~l~~ 388 (390)
T 1d2f_A 354 YTYGEE-----GRGFVRLNAGCPRSKLEKGVAGLINAIRA 388 (390)
T ss_dssp GGGCGG-----GTTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred cccCCC-----CCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 999642 36899999999888999999999988764
No 31
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.45 E-value=4.4e-13 Score=98.83 Aligned_cols=107 Identities=28% Similarity=0.433 Sum_probs=85.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
+.|++++++.++++++.+.+.|++.|+++..|++|+|+|++++... .. ++.+++..|+.++||.+.||+.
T Consensus 282 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~-~~---------~~~~~~~~l~~~~gi~v~~g~~ 351 (411)
T 2o0r_A 282 DAWVAALRNSLRARRDRLAAGLTEIGFAVHDSYGTYFLCADPRPLG-YD---------DSTEFCAALPEKVGVAAIPMSA 351 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEECCCCBSSEEEEECGGGT-CC---------CHHHHHHHHHHHHSEECEEGGG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcCCEecCCCeeEEEEEecCCCC-CC---------CHHHHHHHHHHhCCEEEcChhh
Confidence 6789999999999999999999887888888999999999997521 01 3567888877678999999999
Q ss_pred cccCcc------cCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 87 FYSDEH------KHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 87 f~~~~~------~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
|+.... ...+.+++|++++.+++++++++++|.++++
T Consensus 352 f~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~~~ 394 (411)
T 2o0r_A 352 FCDPAAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVLAE 394 (411)
T ss_dssp GSCCC--------CCGGGCEEEECCSCHHHHHHHHHHHGGGGC
T ss_pred hCCCccccccccccCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 853200 0003579999999888899999999988765
No 32
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.45 E-value=2.3e-13 Score=104.59 Aligned_cols=112 Identities=12% Similarity=0.080 Sum_probs=81.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCC----CCchhhHHHHHHHHHhCCee
Q psy788 5 PDKCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTE----SDKYEDFKFAKWMTKNVKLQ 80 (126)
Q Consensus 5 ~~~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~gV~ 80 (126)
..+.|++.+++.|++|++.+.+.|. .++.+..|+||||+|++++......+.... ....++.++...++.+.||.
T Consensus 404 ~~~~~~~~~r~~~~~r~~~l~~~L~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~ 482 (546)
T 2zy4_A 404 EADEYKHTLKQLIRRRETTLYRELG-MPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIV 482 (546)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHGGGT-SSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcC-CCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEE
Confidence 4468999999999999999999986 566667899999999998631000000000 00001334445556789999
Q ss_pred EeCCCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 81 GIPPSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 81 v~pg~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
+.||+.|+. +++++|++++. +++++++++++|.+++.
T Consensus 483 v~pG~~F~~------~~~~iRis~~~~~~e~i~~~~~~l~~~l~ 520 (546)
T 2zy4_A 483 LLPGRGFGS------NRPSGRASLANLNEYEYAAIGRALRKMAD 520 (546)
T ss_dssp CEESSCTTC------SSCEEEEESSSSCHHHHHHHHHHHHHHHH
T ss_pred EeCccccCC------CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 999999975 36899999997 88889999999988765
No 33
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.44 E-value=1.1e-12 Score=97.18 Aligned_cols=101 Identities=19% Similarity=0.148 Sum_probs=81.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-----CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeE
Q psy788 7 KCYFYTISEELRPKREILADALDKA-----GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQG 81 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-----g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v 81 (126)
+.|++++++.|+++++.+.+.|.+. ++.+..|+||+|+|++++.. +..++.+.| .++||.+
T Consensus 311 ~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~-------------~~~~~~~~l-~~~gv~v 376 (427)
T 3ppl_A 311 RAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPG-------------TASRVAELA-KEAGIAL 376 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTT-------------CHHHHHHHH-HHTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcc-------------hHHHHHHHH-HHCCCEE
Confidence 5789999999999999999998763 47778899999999999852 255777765 6889999
Q ss_pred eC-CCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 82 IP-PSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 82 ~p-g~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
.| |+.|.... ...++++|++|+. +++++++++++|.++++
T Consensus 377 ~~~g~~~~~~~--~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l~ 418 (427)
T 3ppl_A 377 TGAGSSYPLRQ--DPENKNLRLAPSLPPVEELEVAMDGVATCVL 418 (427)
T ss_dssp CCTTTTSGGGC--CTTSCEEEECCSSSCHHHHHHHHHHHHHHHH
T ss_pred ecCcCcCCCCC--CCCCCeEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 99 55554321 1257899999998 78999999999998875
No 34
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.44 E-value=1.2e-12 Score=95.83 Aligned_cols=101 Identities=12% Similarity=0.171 Sum_probs=85.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHh-C-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 7 KCYFYTISEELRPKREILADALDK-A-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~-~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
++|++++++.++++++.+.+.|++ + ++.+..|+|||++|++++..+ . +..+++..|+.++||.+.||
T Consensus 289 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~l~~~~gi~v~~g 357 (399)
T 1c7n_A 289 GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALK--M---------DHKAMEEFMIHKAQIFFDEG 357 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGC--C---------CHHHHHHHHHHTTCCCCEEG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccCC--C---------CHHHHHHHHHHhCCEEEeCc
Confidence 578999999999999999999998 6 788889999999999997521 1 35678888765789999999
Q ss_pred CCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 85 SAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
+.|+.. .++++|++++..++++++++++|.++++
T Consensus 358 ~~~~~~-----~~~~iRis~~~~~~~l~~~l~~l~~~l~ 391 (399)
T 1c7n_A 358 YIFGDG-----GIGFERINLAAPSSVIQESLERLNKALK 391 (399)
T ss_dssp GGGCGG-----GTTEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred cccCCC-----CCCeEEEEeccCHHHHHHHHHHHHHHHH
Confidence 999743 4689999999888899999999988765
No 35
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.43 E-value=2.4e-12 Score=94.40 Aligned_cols=100 Identities=19% Similarity=0.263 Sum_probs=84.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC---CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 8 CYFYTISEELRPKREILADALDKA---GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~---g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
+|++++++.++++++.+.+.|++. |+.+..|.+|+|+|++++.. . +..++++.|. ++||.+.||
T Consensus 288 ~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~~---~---------~~~~~~~~l~-~~gi~v~~g 354 (397)
T 2zyj_A 288 ERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKG---L---------SAEGLFRRAL-EENVAFVPG 354 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECSTT---C---------CHHHHHHHHH-HTTEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCCC---C---------CHHHHHHHHH-HCCCEEech
Confidence 689999999999999999999875 68888899999999999752 1 3667888876 669999999
Q ss_pred CCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 85 SAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
+.|+... ..++++|++++. +++++++++++|.++++
T Consensus 355 ~~f~~~~---~~~~~iRis~~~~~~~~i~~~~~~l~~~l~ 391 (397)
T 2zyj_A 355 GPFFANG---GGENTLRLSYATLDREGIAEGVRRLGRALK 391 (397)
T ss_dssp GGGCTTS---CCTTEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCC---CCCCeEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 9997532 246899999997 68999999999998775
No 36
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.43 E-value=1.5e-12 Score=95.76 Aligned_cols=105 Identities=12% Similarity=0.139 Sum_probs=82.7
Q ss_pred hHHHH-HHHHHHHHHHHHHHHHHhC----CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe
Q psy788 8 CYFYT-ISEELRPKREILADALDKA----GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI 82 (126)
Q Consensus 8 ~~l~~-~r~~~~~r~~~l~~~l~~~----g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~ 82 (126)
.++.+ +++.|+++++.+.+.|.+. ++.+..|++|+|+|++++... . +..+++..| .++||.+.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~--~---------~~~~l~~~l-~~~gi~v~ 368 (417)
T 3g7q_A 301 RLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLP--I---------TTELLYQRL-KARGVLMV 368 (417)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTCS--S---------CHHHHHHHH-HHTTEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCCC--C---------CHHHHHHHH-HHCCEEEE
Confidence 34445 8889999999999999873 477888999999999998622 1 366888886 58899999
Q ss_pred CCCCcccCccc--CCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 83 PPSAFYSDEHK--HLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 83 pg~~f~~~~~~--~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
||+.|+..... ...++++||+|+.+++++++++++|.+++++
T Consensus 369 ~g~~f~~~~~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~l~~ 412 (417)
T 3g7q_A 369 PGHYFFPGLDKPWPHTHQCMRMNYVPEPDKIEAGVKILAEEIER 412 (417)
T ss_dssp EGGGGCTTBSSCCGGGGGEEEEESCSCHHHHHHHHHHHHHHHHH
T ss_pred CchhhCCCCccccccCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 99999764200 0015799999999889999999999988763
No 37
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.43 E-value=3.8e-13 Score=99.09 Aligned_cols=95 Identities=9% Similarity=0.073 Sum_probs=76.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-CCcccC-------------CCcceEEEEeeCCcccccccCCCCCchhhHHHHHH
Q psy788 7 KCYFYTISEELRPKREILADALDKA-GMVPVI-------------PDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKW 72 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~-------------p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (126)
+.|++++++.|+++++.+.+.|+++ ++++.. |++|+|+|++++.. ..+..
T Consensus 277 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~---------------~~~~~- 340 (391)
T 3bwn_A 277 ENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEE---------------TDLVS- 340 (391)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESSS---------------CCHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCcH---------------HHHHH-
Confidence 6799999999999999999999987 555543 45677999999741 12333
Q ss_pred HHHhCCeeEeCCCCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 73 MTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 73 l~~~~gV~v~pg~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
++.++||.+.||+.|+. +++++|+||+.+++++++++++|.++++
T Consensus 341 ~l~~~gV~v~pg~~fg~------~~~~iRis~~~~~e~i~~~~~~L~~~~~ 385 (391)
T 3bwn_A 341 ELRRHKVMSRAGERCGS------DKKHVRVSMLSREDVFNVFLERLANMKL 385 (391)
T ss_dssp HHHHTTEECEEGGGGTC------CTTEEEEESCSCHHHHHHHHHHHHSCC-
T ss_pred HHHHCCEEEccCCCCCC------CCCEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 45689999999999974 3689999999988899999999988765
No 38
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.42 E-value=6e-13 Score=97.13 Aligned_cols=101 Identities=17% Similarity=0.340 Sum_probs=85.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 6 DKCYFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 6 ~~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
.++|++++++.++++++.+.+.|+++ |+++..|+||+|+|++++..+ . +..+++..|+.+.||.+.||
T Consensus 285 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~l~~~~gi~v~~g 353 (388)
T 1j32_A 285 SQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTG--R---------SSLDFCSELLDQHQVATVPG 353 (388)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTTEECCBCGGGT--C---------CHHHHHHHHHHHHCEECEEG
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCeeEEEEEecCCCC--C---------CHHHHHHHHHHhCCEEEeCh
Confidence 45789999999999999999999988 888888999999999887421 1 36678888765579999999
Q ss_pred CCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 85 SAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
+.|+. ++++|++++.+++++++++++|.+++++
T Consensus 354 ~~~~~-------~~~iRis~~~~~~~i~~~~~~l~~~l~~ 386 (388)
T 1j32_A 354 AAFGA-------DDCIRLSYATDLDTIKRGMERLEKFLHG 386 (388)
T ss_dssp GGGTC-------TTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred hhhCC-------CCcEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 98863 4789999998889999999999988764
No 39
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.42 E-value=9.2e-13 Score=95.75 Aligned_cols=102 Identities=14% Similarity=0.077 Sum_probs=87.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe
Q psy788 4 APDKCYFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI 82 (126)
Q Consensus 4 ~~~~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~ 82 (126)
...+.+++++++.++++++.+.+.|+++ ++.+..|.||+++|+.++.. . +..+++..++.+.||.+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~ll~~~gi~v~ 335 (375)
T 3op7_A 268 AHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVD---M---------PMEDFCLQLLQEHGVLLV 335 (375)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCS---S---------CHHHHHHHHHHHHCEECE
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCC---C---------CHHHHHHHHHHhCCEEEe
Confidence 3456789999999999999999999987 68888999999999999753 1 366888887778999999
Q ss_pred CCCCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 83 PPSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 83 pg~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
||+.|+. ++++|++++...+++++++++|.+++++
T Consensus 336 ~g~~~~~-------~~~iRi~~~~~~~~i~~~l~~l~~~l~~ 370 (375)
T 3op7_A 336 PGNRFER-------DGYVRLGFACEQETLIKGLEKLSQFLRR 370 (375)
T ss_dssp EGGGGTC-------TTEEEECCCSCHHHHHHHHHHHHHHHGG
T ss_pred ChhhhCC-------CCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 9998873 5799999999779999999999988763
No 40
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.41 E-value=3.4e-13 Score=99.16 Aligned_cols=98 Identities=15% Similarity=0.169 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEe-eCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 9 YFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVAD-WTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
|++++++.|+++++.+.+.|++.|+++..|.+|+|+|++ ++.. . ++.+++..|+.+.||.+.||+.|
T Consensus 293 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~l~~~~gv~v~~g~~f 360 (400)
T 3asa_A 293 PQLEAIHYYRENSDLLRKALLATGFEVFGGEHAPYLWVKPTQAN---I---------SDRDLFDFFLREYHIAITPGIGF 360 (400)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHTTCEEEECSSSSEEEEECCCTT---C---------CTTTHHHHHHHHHSEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCceEEEEeccCCC---C---------CHHHHHHHHHHhCCEEEeChhHh
Confidence 678899999999999999999888888888899999999 7642 1 24467777776679999999999
Q ss_pred ccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 88 YSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
+.. +++++|+++..+++++++++++|.++++
T Consensus 361 ~~~-----~~~~iRis~~~~~e~i~~~l~~l~~~~~ 391 (400)
T 3asa_A 361 GRS-----GSGFVRFSSLGKREDILAACERLQMAPA 391 (400)
T ss_dssp CGG-----GTTCEEEECCSCHHHHHHHHHHHHC---
T ss_pred CCC-----CCCEEEEEeeCCHHHHHHHHHHHHHHHH
Confidence 743 3689999977788999999999998876
No 41
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.41 E-value=7.2e-13 Score=97.53 Aligned_cols=103 Identities=18% Similarity=0.283 Sum_probs=85.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
.++++++++.++++++.+.+.|+++ ++.+..|+||+|+|++++... .. +..+++..|+.+.||.+.||+
T Consensus 299 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~l~~~l~~~~gi~v~~g~ 368 (406)
T 1xi9_A 299 MDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGP-WK---------NDKEFVLDVLHNAHVLFVHGS 368 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSCS-CS---------SHHHHHHHHHHHHCEECEEGG
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCeeEEEEEecCccC-CC---------CHHHHHHHHHHhCCEEEeCch
Confidence 4578999999999999999999988 788888999999999987410 01 366788887668899999999
Q ss_pred CcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 86 AFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
.|+.. +++++|++++.+++++++++++|.+++++
T Consensus 369 ~f~~~-----~~~~lRis~~~~~~~i~~~~~~l~~~l~~ 402 (406)
T 1xi9_A 369 GFGEY-----GAGHFRAVFLPPIEILEEAMDRFEKFMKE 402 (406)
T ss_dssp GGCGG-----GTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred hcCCC-----CCCEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 99753 36899999998889999999999988764
No 42
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.41 E-value=3.4e-12 Score=94.48 Aligned_cols=106 Identities=19% Similarity=0.271 Sum_probs=84.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
.|++++++.++++++.+.+.|+++|+++..|++|+|+|++++..... ....+..++++.|+.+.||.+.||+.|
T Consensus 320 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~l~~~l~~~~gi~v~~~~~~ 393 (428)
T 1iay_A 320 NFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMDLRPLLRE------STFDSEMSLWRVIINDVKLNVSPGSSF 393 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCSSSSEEEEECGGGCSS------SSHHHHHHHHHHHHHTSCEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEechhhcCC------CchhHHHHHHHHHHHhCCEEEeCchhh
Confidence 48899999999999999999998888888888999999999753100 000124578888765569999999988
Q ss_pred ccCcccCCCCCeEEEEee-CChhHHHHHHHHHHHhhhc
Q psy788 88 YSDEHKHLGENLIRYCFF-KKDETLREASSILQTWRNK 124 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~-~~~e~i~~~~~~l~~~~~~ 124 (126)
+.. +++++|++++ .+++++++++++|.+++++
T Consensus 394 ~~~-----~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 394 ECQ-----EPGWFRVCFANMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp TCS-----SSSEEEEECSSSCHHHHHHHHHHHHHHHHT
T ss_pred CCC-----CCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 753 3679999999 5889999999999988764
No 43
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.40 E-value=2.2e-12 Score=95.00 Aligned_cols=104 Identities=16% Similarity=0.311 Sum_probs=85.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
+.|++++++.++++++.+.+.|+++ |+.+..|.+|+|+|++++... +. . ..++.+++..|+.++||.+.||+
T Consensus 308 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~--~~--~---~~~~~~~~~~l~~~~gi~v~~g~ 380 (416)
T 1bw0_A 308 QEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEK--YR--D---IKTDVEFFEKLLEEENVQVLPGT 380 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEECGGG--BS--S---CCSHHHHHHHHHHHHCEECEEGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCHHH--cC--C---CCCHHHHHHHHHHHCCEEEeccc
Confidence 5789999999999999999999987 788888999999999987421 00 0 00356788887668899999999
Q ss_pred CcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 86 AFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
.|+. ++++|++++.+++++++++++|.+++++
T Consensus 381 ~f~~-------~~~iRis~~~~~e~l~~~l~~l~~~l~~ 412 (416)
T 1bw0_A 381 IFHA-------PGFTRLTTTRPVEVYREAVERIKAFCQR 412 (416)
T ss_dssp GGTC-------TTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred ccCC-------CCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 8863 4799999988889999999999988763
No 44
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.40 E-value=1.3e-12 Score=96.82 Aligned_cols=101 Identities=20% Similarity=0.245 Sum_probs=83.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-----CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeE
Q psy788 7 KCYFYTISEELRPKREILADALDKA-----GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQG 81 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-----g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v 81 (126)
++|++++++.|+++++.+.+.|++. |+.+..|.+|+|+|++++.. . +..++++.|. ++||.+
T Consensus 310 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~---~---------~~~~l~~~l~-~~gi~v 376 (425)
T 1vp4_A 310 LEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEG---F---------DTWEMFEYAK-RKKVFY 376 (425)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTT---C---------CTTTTHHHHH-HHTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCC---C---------CHHHHHHHHH-HCCCEE
Confidence 5789999999999999999999875 57887899999999999752 1 2446778876 559999
Q ss_pred eCCCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 82 IPPSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 82 ~pg~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
.||+.|+... ..++++|++++. +++++++++++|.++++
T Consensus 377 ~~g~~f~~~~---~~~~~iRis~~~~~~e~i~~~l~~l~~~l~ 416 (425)
T 1vp4_A 377 VPGRVFKVYD---EPSPSMRLSFCLPPDEKIVEGIKRLREVVL 416 (425)
T ss_dssp EEGGGGCTTC---CCCSEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred ECchhhcCCC---CCCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 9999997532 246899999998 78999999999988765
No 45
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.40 E-value=3.8e-12 Score=94.01 Aligned_cols=101 Identities=16% Similarity=0.240 Sum_probs=81.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHh----CC--CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCee
Q psy788 7 KCYFYTISEELRPKREILADALDK----AG--MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQ 80 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~----~g--~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~ 80 (126)
..|++++++.|+++++.+.+.|.+ .+ +.+..|++|+|+|++++.. +..++... +.++||.
T Consensus 305 ~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~-------------~~~~~~~~-l~~~gv~ 370 (423)
T 3ez1_A 305 EGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP-------------VADRVVKL-AEAAGVS 370 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS-------------CHHHHHHH-HHHTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC-------------cHHHHHHH-HHHCCcE
Confidence 578999999999999999888876 23 6678899999999999852 24566666 4689999
Q ss_pred EeC-CCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 81 GIP-PSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 81 v~p-g~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
+.| |+.|+... ...++++||+++. +++++++++++|.++++
T Consensus 371 v~~~g~~~~~~~--~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~ 413 (423)
T 3ez1_A 371 LTPAGATYPAGQ--DPHNRNLRLAPTRPPVEEVRTAMQVVAACIR 413 (423)
T ss_dssp CCCTTTTSSTTC--CSSSCEEEECCSSSCHHHHHHHHHHHHHHHH
T ss_pred EecCcccccCCC--CCCCCeEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 999 66775321 0247899999997 89999999999998876
No 46
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.39 E-value=3e-12 Score=93.70 Aligned_cols=90 Identities=14% Similarity=0.279 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcccCcc
Q psy788 13 ISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYSDEH 92 (126)
Q Consensus 13 ~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~ 92 (126)
.++.|+++++.+.+.|.+.|+.+..|+||+|+|++++.. +..++++.| .++||.+.||+.|+.
T Consensus 305 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~l-~~~gi~v~~g~~~~~--- 367 (398)
T 3ele_A 305 DINAYKENRDLLYEGLTRIGYHCFKPDGAFYMFVKALED-------------DSNAFCEKA-KEEDVLIVAADGFGC--- 367 (398)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECSSS-------------CHHHHHHHH-HTTTEECEESGGGTC---
T ss_pred HHHHHHHHHHHHHHHHHHcCCeecCCCeeEEEEEEcCCC-------------CHHHHHHHH-HHCCEEEeCccccCC---
Confidence 468899999999999988888999999999999998752 366788875 588999999999963
Q ss_pred cCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 93 KHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 93 ~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
++++|++++.+++++++++++|.++++
T Consensus 368 ----~~~iRis~~~~~e~i~~~l~~l~~~l~ 394 (398)
T 3ele_A 368 ----PGWVRISYCVDREMIKHSMPAFEKIYK 394 (398)
T ss_dssp ----TTEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred ----CCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 579999999899999999999998876
No 47
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.09 E-value=3e-14 Score=104.46 Aligned_cols=105 Identities=15% Similarity=0.170 Sum_probs=87.2
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHh-C-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCee
Q psy788 3 TAPDKCYFYTISEELRPKREILADALDK-A-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQ 80 (126)
Q Consensus 3 ~~~~~~~l~~~r~~~~~r~~~l~~~l~~-~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~ 80 (126)
|...++|++++++.++++++.+.+.|++ + ++.+..|+|||++|++++..+ . +..++++.|+.++||.
T Consensus 285 l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~--~---------~~~~l~~~l~~~~gi~ 353 (392)
T 3b1d_A 285 YRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYG--L---------TDDALFTLLHDQAKVI 353 (392)
Confidence 3444679999999999999999999988 5 788889999999999997521 1 2557888875578999
Q ss_pred EeCCCCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 81 GIPPSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 81 v~pg~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
+.||+.|+.. +++++|++++.+++++++++++|.++++
T Consensus 354 v~~g~~f~~~-----~~~~iRi~~~~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 354 LNRGSDYGSE-----GELHARLNIAAPKSLVEEICKRIVCCLP 391 (392)
Confidence 9999999742 4689999999888889999999988765
No 48
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.38 E-value=3.7e-12 Score=93.86 Aligned_cols=104 Identities=23% Similarity=0.415 Sum_probs=86.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhCCCcc-cCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHh-----CC
Q psy788 5 PDKCYFYTISEELRPKREILADALDKAGMVP-VIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKN-----VK 78 (126)
Q Consensus 5 ~~~~~l~~~r~~~~~r~~~l~~~l~~~g~~~-~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~g 78 (126)
..+.|++++++.++++++.+.+.|+++|+++ ..|++|+|+|++++. . +..+++..|..+ .|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~----~---------~~~~l~~~l~~~~~~~~~g 357 (409)
T 2gb3_A 291 LDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELPV----E---------DAEEFARWMLTDFNMDGET 357 (409)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEEECSS----S---------CHHHHHHHHHHSCCBTTEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHcCceeeeCCCeeEEEEEEeCC----C---------CHHHHHHHHHhccccccCc
Confidence 3467899999999999999999998888888 789999999999872 1 366788887644 49
Q ss_pred eeEeCCCCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 79 LQGIPPSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 79 V~v~pg~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
|.+.||+.|+... ..+++++|++++.+++++++++++|.++++
T Consensus 358 i~v~~g~~f~~~~--~~~~~~iRis~~~~~e~i~~~~~~l~~~l~ 400 (409)
T 2gb3_A 358 TMVAPLRGFYLTP--GLGKKEIRIACVLEKDLLSRAIDVLMEGLK 400 (409)
T ss_dssp EECEEGGGGCSST--TTTSSEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred EEEeCchHhCCCC--CCCCCEEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 9999999997531 024689999999888999999999988775
No 49
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.36 E-value=8.2e-12 Score=92.50 Aligned_cols=101 Identities=22% Similarity=0.180 Sum_probs=79.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC----C-CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeE
Q psy788 7 KCYFYTISEELRPKREILADALDKA----G-MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQG 81 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~----g-~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v 81 (126)
++|++++++.|+++++.+.+.|.+. + +.+..|+||+|+|++++.. +..++... +.++||.+
T Consensus 309 ~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~-------------~~~~~~~~-l~~~gV~v 374 (422)
T 3d6k_A 309 KAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG-------------TASRVVEL-AKEAGIAL 374 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTT-------------CHHHHHHH-HHHTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCC-------------CHHHHHHH-HHHCCeEE
Confidence 4789999999999999999998763 3 5667899999999999752 24456665 56899999
Q ss_pred eC-CCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 82 IP-PSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 82 ~p-g~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
.| |+.|.... ...++++|||++. +++++++++++|.++++
T Consensus 375 ~~~g~~f~~~~--~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~ 416 (422)
T 3d6k_A 375 TGAGSSFPLHN--DPNNENIRLAPSLPPVAELEVAMDGFATCVL 416 (422)
T ss_dssp CCTTTTSGGGC--CTTSCEEEECCSSSCHHHHHHHHHHHHHHHH
T ss_pred EcCccccCCCC--CCCCCeEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 99 45564221 0136899999995 89999999999998775
No 50
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.36 E-value=6.1e-12 Score=92.16 Aligned_cols=94 Identities=22% Similarity=0.407 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCccc
Q psy788 10 FYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYS 89 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~ 89 (126)
++++++.++++++.+.+.|+++|+++..|+||+|+|++++ . +..++++.|+.+.||.+.||+.|+.
T Consensus 295 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~-~-------------~~~~l~~~l~~~~gi~v~~g~~f~~ 360 (389)
T 1o4s_A 295 NSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVR-G-------------DDVKFCERLLEEKKVALVPGSAFLK 360 (389)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEECS-S-------------CHHHHHHHHHHHHCEECEEGGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeeecCCcceEEEEeCC-C-------------CHHHHHHHHHHHCCEEEeCchhcCC
Confidence 6788999999999999999888888888999999999987 2 2567888876588999999998863
Q ss_pred CcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 90 DEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 90 ~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
++++|++++.+++++++++++|.+++++
T Consensus 361 -------~~~~Ris~~~~~~~l~~~l~~l~~~l~~ 388 (389)
T 1o4s_A 361 -------PGFVRLSFATSIERLTEALDRIEDFLNS 388 (389)
T ss_dssp -------TTEEEEECCSCHHHHHHHHHHHHHHHTC
T ss_pred -------CCeEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 3699999999889999999999988764
No 51
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.35 E-value=7e-12 Score=92.00 Aligned_cols=102 Identities=22% Similarity=0.281 Sum_probs=84.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC--CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 8 CYFYTISEELRPKREILADALDKA--GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~--g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
.|++++++.++++++.+.+.|++. ++.+..|.+|+|+|++++.. . +..+++..|..+.||.+.||+
T Consensus 299 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~l~~~l~~~~gi~v~~g~ 366 (407)
T 2zc0_A 299 YHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEG---A---------DGISFANELMEREGVVVVPGK 366 (407)
T ss_dssp HTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECSTT---C---------CHHHHHHHHHHHTCEECBCSG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcCCC---C---------CHHHHHHHHHHhCCeEEECch
Confidence 678899999999999999999874 67777899999999999752 1 366788887644499999999
Q ss_pred CcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhhc
Q psy788 86 AFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRNK 124 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~~ 124 (126)
.|+... ..++++|++++. +++++++++++|.+++++
T Consensus 367 ~~~~~~---~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 403 (407)
T 2zc0_A 367 PFYTDE---SGKNAIRLNFSRPSKEEIPIGIKKLAKLYKE 403 (407)
T ss_dssp GGCSSS---CCTTEEEEECSSSCTTHHHHHHHHHHHHHHH
T ss_pred hccCCC---CCCCeEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 987532 246899999997 689999999999988753
No 52
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.35 E-value=6e-12 Score=91.37 Aligned_cols=96 Identities=13% Similarity=0.191 Sum_probs=81.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
..+++++++.++++++.+.+.|+ ++. .|.+|+|+|++++. ..+++..|.+++||.+.||+.
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~~l~--~~~--~~~~~~~~~~~~~~---------------~~~~~~~l~~~~gi~v~~g~~ 339 (376)
T 3ezs_A 279 DRHAEFFRNIYANNLKLARKIFK--NTL--IYPYSFYVYLPVQN---------------GENFAKTLYQNEGIITLPALY 339 (376)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHST--TCC--CCSBSSEEEEECSC---------------HHHHHHHHHHHHCCBCEEGGG
T ss_pred cHHHHHHHHHHHHHHHHHHHHhc--CCC--CCCcceEEEEECCC---------------HHHHHHHHHHhCCEEEeCcHH
Confidence 46789999999999999999997 554 78999999999872 557888876558999999999
Q ss_pred cccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 87 FYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
|+... ..++++|++++.+++++++++++|.+++++
T Consensus 340 ~~~~~---~~~~~iRis~~~~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 340 LGRNR---IGADYVRLALVYDTPLLEKPLEIIETYREN 374 (376)
T ss_dssp GCSTT---TTTTEEEEECCSCHHHHHHHHHHHHHHHCC
T ss_pred hCCCC---CCCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 98531 257899999998899999999999998865
No 53
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.33 E-value=1.5e-11 Score=89.52 Aligned_cols=97 Identities=29% Similarity=0.547 Sum_probs=81.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
++|++++++.++++++.+.+.|++.|+++..|+||+|+|++++.. + +.. ++.++||.+.||+.
T Consensus 273 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~--------------~--~~~-~l~~~gi~v~~g~~ 335 (381)
T 1v2d_A 273 EGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPGW--------------D--AFR-LVEEARVALIPASA 335 (381)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECTTC--------------C--HHH-HHHHTCEECEEGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCcceEEEEecChH--------------h--HHH-HHHhCCEEEecchH
Confidence 568999999999999999999988888888899999999998641 2 333 45689999999999
Q ss_pred cccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 87 FYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
|+... ...+++|++++.+.+++++++++|.++++
T Consensus 336 ~~~~~---~~~~~iRi~~~~~~~~i~~~~~~l~~~l~ 369 (381)
T 1v2d_A 336 FYLED---PPKDLFRFAFCKTEEELHLALERLGRVVN 369 (381)
T ss_dssp GCSSS---CCTTEEEEECCSCHHHHHHHHHHHHHHC-
T ss_pred hCCCC---CCCCEEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 97531 24689999999988999999999988765
No 54
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.32 E-value=1.9e-11 Score=90.75 Aligned_cols=104 Identities=13% Similarity=0.197 Sum_probs=81.3
Q ss_pred hHHHH-HHHHHHHHHHHHHHHHHhC----CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe
Q psy788 8 CYFYT-ISEELRPKREILADALDKA----GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI 82 (126)
Q Consensus 8 ~~l~~-~r~~~~~r~~~l~~~l~~~----g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~ 82 (126)
.++.+ +++.|+++++.+.+.|.+. ++.+..|++|+|+|++++... . +..+++..| .++||.+.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~--~---------~~~~l~~~l-~~~gi~v~ 394 (444)
T 3if2_A 327 QLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLP--I---------STLDLYERL-KAKGTLIV 394 (444)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCS--S---------CHHHHHHHH-HHTTEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCC--C---------CHHHHHHHH-HHCCeEEe
Confidence 34455 8889999999999998763 456778999999999998521 1 366788886 58899999
Q ss_pred CCCCcccCccc---CCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 83 PPSAFYSDEHK---HLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 83 pg~~f~~~~~~---~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
||+.|+..... ...++++||+|+.+++++++++++|.++++
T Consensus 395 ~g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~ 438 (444)
T 3if2_A 395 PSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVVR 438 (444)
T ss_dssp EGGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHHH
T ss_pred cchhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 99999753100 012479999999988999999999998875
No 55
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.31 E-value=1.8e-11 Score=90.57 Aligned_cols=96 Identities=15% Similarity=0.200 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccc-------CCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe
Q psy788 10 FYTISEELRPKREILADALDKAGMVPV-------IPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI 82 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~g~~~~-------~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~ 82 (126)
++++++.++++++.+.+.|+++|+++. +|.+|+|+|++++. . +..+++..|. ++||.+.
T Consensus 333 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~---------~~~~l~~~L~-~~gi~v~ 398 (437)
T 3g0t_A 333 FRDSVIEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYKG----M---------DSSKLIEKFV-RYGMCAI 398 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEESSCEETTEECCSSSEEEEEETT----C---------CHHHHHHHHH-HTTEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCEEeccccCCCCCceeEEEEEecCC----C---------CHHHHHHHHH-HcCeEEe
Confidence 899999999999999999998887777 44999999999983 1 3678888875 6799999
Q ss_pred CCCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhhc
Q psy788 83 PPSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRNK 124 (126)
Q Consensus 83 pg~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~~ 124 (126)
||+.|+.. .++++|++++. +++++++++++|.+++++
T Consensus 399 ~~~~~~~~-----~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 399 TLKTTGSK-----RNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp ESTTTTCC-----CTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred eccccCCC-----CCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 99998753 34789999997 889999999999987753
No 56
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.27 E-value=4.7e-11 Score=88.42 Aligned_cols=90 Identities=12% Similarity=0.159 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH----hCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 10 FYTISEELRPKREILADALD----KAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~----~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
++++++.|+++++.+.+.|+ +.|+++..|+||+|+|++++. . +..+++..|.+++||.+.||
T Consensus 333 ~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~----~---------~~~~~~~~l~~~~gi~v~~g- 398 (430)
T 2x5f_A 333 IEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKVHD----V---------DPEALRKHLIDKYSIGVIAL- 398 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCGGGTTTEEECCCCBSSEEEEEESS----S---------CHHHHHHHHHHHHCEECEEC-
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCceeeCCCceEEEEeCCCC----C---------CHHHHHHHHHHhCCEEEecC-
Confidence 33499999999999999998 557888889999999999982 1 36688888765489999998
Q ss_pred CcccCcccCCCCCeEEEEee-CChhHHHHHHHHHHHhhh
Q psy788 86 AFYSDEHKHLGENLIRYCFF-KKDETLREASSILQTWRN 123 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~-~~~e~i~~~~~~l~~~~~ 123 (126)
. ++++|++++ .+++++++++++|.++++
T Consensus 399 ----~------~~~iRis~~~~~~e~i~~~~~~l~~~l~ 427 (430)
T 2x5f_A 399 ----N------ATDIRIAFSCVEKDDIPHVFDSIAKAID 427 (430)
T ss_dssp ----S------SSEEEEEGGGSCGGGHHHHHHHHHHHHH
T ss_pred ----C------CCeEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 1 468999999 688899999999998875
No 57
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.25 E-value=4.6e-11 Score=88.07 Aligned_cols=88 Identities=13% Similarity=0.109 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcc
Q psy788 9 YFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFY 88 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~ 88 (126)
+++++++.|+++++.+.+.|+++|+++..|+||||+|++++ +..++++.| .++||.+.||
T Consensus 326 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~---------------~~~~~~~~l-~~~gi~v~~g---- 385 (418)
T 3rq1_A 326 ERNCYYQLIRDRADIFKQEAAQVGLPMLPYRGGFFITIPTD---------------SANAICEEL-KKEHIYVIAL---- 385 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCSSSEEEEECT---------------THHHHHHHH-HHTTEECEEC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEcCCC---------------CHHHHHHHH-HhCCEEEecC----
Confidence 44578899999999999999888999999999999999874 255777765 6899999996
Q ss_pred cCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhhc
Q psy788 89 SDEHKHLGENLIRYCFFK-KDETLREASSILQTWRNK 124 (126)
Q Consensus 89 ~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~~ 124 (126)
++++||+|+. +++++++++++|.+++++
T Consensus 386 --------~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 414 (418)
T 3rq1_A 386 --------ANGIRIAACGIPKCQMTGLAEKIYNAMKS 414 (418)
T ss_dssp --------SSEEEEEGGGSCHHHHTTHHHHHHHHHHH
T ss_pred --------CCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 2479999995 899999999999988763
No 58
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.21 E-value=1.8e-11 Score=91.05 Aligned_cols=83 Identities=14% Similarity=0.119 Sum_probs=68.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH----hCC----CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCe
Q psy788 8 CYFYTISEELRPKREILADALD----KAG----MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKL 79 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~----~~g----~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV 79 (126)
++++.+|+.|+++|+.+.+.|+ ++| +++..|+||||+|+.++. +++..| .++||
T Consensus 312 ~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~-----------------~~~~~L-~~~gV 373 (405)
T 3k7y_A 312 KELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA-----------------KIAEHL-KTHHI 373 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG-----------------GGTTTT-TTTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCH-----------------HHHHHH-HHCCE
Confidence 5678888999999999999999 765 578899999999987652 234566 78999
Q ss_pred eEeCCCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 80 QGIPPSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 80 ~v~pg~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
.++|| + ||||+. +++.++.++++|.++++
T Consensus 374 ~v~p~-----------~----Ris~a~~~~~~i~~~~~~i~~~~~ 403 (405)
T 3k7y_A 374 YIINN-----------G----RINVSGITKNNVDYIADKICLSLS 403 (405)
T ss_dssp ECCTT-----------S----EEEGGGCCTTHHHHHHHHHHHHHH
T ss_pred eecCC-----------C----eEEEeccCHHHHHHHHHHHHHHHh
Confidence 99983 1 999986 88999999999998765
No 59
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.20 E-value=1.2e-10 Score=85.22 Aligned_cols=97 Identities=13% Similarity=0.031 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcc
Q psy788 9 YFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFY 88 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~ 88 (126)
+++++++.++++++.+.+.|++.|+++..|. |+|+|+.++.. . +..+++..|. ++||.+.||+.|+
T Consensus 292 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-g~~~~~~~~~~---~---------~~~~l~~~l~-~~gi~v~~~~~~~ 357 (398)
T 3a2b_A 292 NEPEHIEKLWKNTDYAKAQLLDHGFDLGATE-SPILPIFIRSN---E---------KTFWVTKMLQ-DDGVFVNPVVSPA 357 (398)
T ss_dssp HCTHHHHHHHHHHHHHHHHHHHTTCCBCSCC-SSEEEEECCCH---H---------HHHHHHHHHH-HTTEECEEECTTT
T ss_pred hCHHHHHHHHHHHHHHHHHHHhcCCCcCCCC-CCEEEEEcCCH---H---------HHHHHHHHHH-HCCcEEEeeCCCC
Confidence 4568899999999999999998888877776 57999998742 1 3667888876 5699999999886
Q ss_pred cCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 89 SDEHKHLGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 89 ~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
... +.+++|++++. +++++++++++|.++++
T Consensus 358 ~~~----~~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 390 (398)
T 3a2b_A 358 VPA----EESLIRFSLMATHTYDQIDEAIEKMVKVFK 390 (398)
T ss_dssp SCG----GGCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCC----CCceEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 431 46899999996 88999999999998875
No 60
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.17 E-value=4.4e-10 Score=80.98 Aligned_cols=94 Identities=11% Similarity=0.141 Sum_probs=74.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 7 KCYFYTISEELRPKREILADALDKA-GMV-PVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-g~~-~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
.+|++++++.++++++.+.+.|+++ ++. +..|.|+ |+|++++.. +..+++..|. ++||.+.||
T Consensus 262 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~l~~~l~-~~gi~v~~g 326 (361)
T 3ftb_A 262 TNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHAN-FVLCRLENI-------------SGEKLYDSLL-KEDIVIRRC 326 (361)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCSSS-EEEEEESSS-------------CHHHHHHHHH-TTTEECEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCe-EEEEEcCCC-------------CHHHHHHHHH-HCCeEEeeC
Confidence 5799999999999999999999988 677 6666655 788888751 3668888875 669999999
Q ss_pred CCcccCcccCCCCCeEEEEeeCCh--hHHHHHHHHHHH
Q psy788 85 SAFYSDEHKHLGENLIRYCFFKKD--ETLREASSILQT 120 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~~~~~--e~i~~~~~~l~~ 120 (126)
+.|+.. +++++|++++.++ +.+.++++++.+
T Consensus 327 ~~~~~~-----~~~~iRis~~~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 327 CNFIGL-----DDSFVRFAIKDEKKNTKFLRALKGVEN 359 (361)
T ss_dssp TTSTTC-----CTTEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCC-----CCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 999753 4789999999733 467777766654
No 61
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.14 E-value=1.7e-10 Score=83.14 Aligned_cols=95 Identities=15% Similarity=0.120 Sum_probs=68.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 8 CYFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
.|.+++++.+ ++++.+.+.|+++ ++.+.++ +|.|+|++++.. +..++++.|..+.||.+.||+.
T Consensus 245 ~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~-------------~~~~l~~~L~~~~gi~v~~g~~ 309 (350)
T 3fkd_A 245 QFTLPIRKWQ-RNTVDFITALNRLDGVEVHPS-GTTFFLLRLKKG-------------TAAELKKYMLEEYNMLIRDASN 309 (350)
T ss_dssp TTCCCHHHHH-HHHHHHHHHHHHSTTEEECCC-SSSEEEEEESSS-------------CHHHHHHHHHHTTCEECEECTT
T ss_pred HHHHHHHHHH-HHHHHHHHHHhcCCCcEECCC-CCcEEEEECCCC-------------CHHHHHHHHHHHCCEEEEeCcc
Confidence 4666666666 8899999999988 7777554 455788988752 2668888876549999999999
Q ss_pred cccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 87 FYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
|+.. .++++|++++. +++++..++.|.++.+
T Consensus 310 f~~~-----~~~~iRis~~~-~~~~~~l~~al~~~~~ 340 (350)
T 3fkd_A 310 FRGL-----DESYVRITTQR-PAQNQLFIKALETFLE 340 (350)
T ss_dssp STTC-----CTTEEEEECCC-HHHHHHHHHHHHHHHT
T ss_pred CCCC-----CCCEEEEEcCC-HHHHHHHHHHHHHHHH
Confidence 9753 47899999996 3333444444444444
No 62
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.14 E-value=4.9e-10 Score=81.08 Aligned_cols=94 Identities=14% Similarity=0.089 Sum_probs=77.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
..|++++++.++++++.+.+.|+++ |+.+ .|.+|+|+|++++. ..++...| .++||.+.||+
T Consensus 272 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-~~~~~~~~~~~~~~---------------~~~l~~~l-~~~gi~v~~~~ 334 (367)
T 3euc_A 272 VAVLDEQAAQLRAERSRVAEGMAAHGGVTV-FPSAANFLLARVPD---------------AAQTFDRL-LARKVLIKNVS 334 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSTTCEE-CCCSSSEEEEECSC---------------HHHHHHHH-HTTTEECEECG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcEE-CCCCCeEEEEECCC---------------HHHHHHHH-HHCCeEEEECC
Confidence 6789999999999999999999988 7875 56677799998861 45677775 68899999999
Q ss_pred CcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 86 AFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
.|+.. ..+++|++++ ++++++..++.|.++++
T Consensus 335 ~~~~~-----~~~~iRis~~-~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 335 KMHPL-----LANCLRVTVS-TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp GGCGG-----GTTEEEEECC-CHHHHHHHHHHHHHHTC
T ss_pred ccCCC-----CCCEEEEecC-CHHHHHHHHHHHHHHhc
Confidence 88743 4789999998 67788999999988764
No 63
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.13 E-value=9.4e-10 Score=79.53 Aligned_cols=92 Identities=8% Similarity=-0.042 Sum_probs=76.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
..|++++++.++++++.+.+.|+++|+++.++.|+ |+|++++.. +..++.+.|. ++||.+.||+.
T Consensus 273 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~~~~~~~~~-------------~~~~~~~~l~-~~gi~v~~g~~ 337 (365)
T 3get_A 273 DEFTEKTLENNFSQMELYKEFAKKHNIKIIDSYTN-FITYFFDEK-------------NSTDLSEKLL-KKGIIIRNLKS 337 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCSSS-EEEEECSSS-------------CHHHHHHHHH-TTTEECEECGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEECCCCCe-EEEEECCCC-------------CHHHHHHHHH-HCCEEEEECcc
Confidence 47899999999999999999999888887666655 689998752 2667888865 78999999998
Q ss_pred cccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhh
Q psy788 87 FYSDEHKHLGENLIRYCFFKKDETLREASSILQTWR 122 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~ 122 (126)
|+ ++++|++++ ++++++..++.|.+++
T Consensus 338 ~~--------~~~iRis~~-~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 338 YG--------LNAIRITIG-TSYENEKFFTEFDKIL 364 (365)
T ss_dssp GT--------CSEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred CC--------CCEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 86 368999999 5777889998888765
No 64
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.12 E-value=5.5e-10 Score=82.15 Aligned_cols=85 Identities=15% Similarity=0.261 Sum_probs=69.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
++++.+++.|+++++.+.+.|+++|+++..|+||||+|+++. +..++++.| .++||.+.||
T Consensus 323 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~---------------~~~~~~~~l-~~~gv~v~~g--- 383 (413)
T 3t18_A 323 QELVDLRNMLKSRADVFVTAAKENKLTMIPYFGGFFTFIPTD---------------KAFDIVKDL-EKENIFTIPS--- 383 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSSSCEEEECS---------------CHHHHHHHH-HHTTEECEEC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCccCCCceEEEEeCCC---------------CHHHHHHHH-HhCCEEEecC---
Confidence 466788999999999999999988999999999999999763 256787775 6889999996
Q ss_pred ccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 88 YSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
++++||+++. +.+++ +++|.++++
T Consensus 384 ---------~~~iRis~~~~~~~~~---l~~l~~~l~ 408 (413)
T 3t18_A 384 ---------AKGIRVAICGVGEEKI---PKLVQRLAF 408 (413)
T ss_dssp ---------SSEEEECTTTSCGGGH---HHHHHHHHH
T ss_pred ---------CCceEEEEeeCCHHHH---HHHHHHHHH
Confidence 2589999996 66665 777776654
No 65
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.11 E-value=1.3e-09 Score=78.41 Aligned_cols=92 Identities=13% Similarity=0.136 Sum_probs=75.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
.|++++++.++++++.+.+.|+++++.+.++ +|.|+|++++. +..++...|. ++||.+. |+.+
T Consensus 260 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~--------------~~~~~~~~l~-~~gi~v~-g~~~ 322 (354)
T 3ly1_A 260 AFITYSKKSNDVSRQILLKALEDLKLPYLPS-EGNFVFHQLVV--------------PLKDYQTHMA-DAGVLIG-RAFP 322 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC-CSSEEEEECSS--------------CHHHHHHHHH-HTTEECC-CCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCeECCC-CceEEEEECCC--------------CHHHHHHHHH-HCCEEEe-ecCC
Confidence 7899999999999999999998888877655 55679999874 2567888865 7899988 7644
Q ss_pred ccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 88 YSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
+ .++++|++++ +++++++.++.|.+++++
T Consensus 323 ~-------~~~~iRis~~-~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 323 P-------ADNWCRISLG-TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp T-------CTTEEEEECC-CHHHHHHHHHHHHHHHHT
T ss_pred C-------CCCEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 3 3689999998 577889999999988875
No 66
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.10 E-value=1.6e-09 Score=78.28 Aligned_cols=91 Identities=10% Similarity=0.041 Sum_probs=75.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
..|++++++.++++++.+.+.|+++ |+.+.++. |.|+|++++. +..++.+.|. ++||.+.||+
T Consensus 271 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~--------------~~~~~~~~l~-~~gi~v~~g~ 334 (363)
T 3ffh_A 271 QAFIGECRTSNANGIKQYEAFAKRFEKVKLYPAN-GNFVLIDLGI--------------EAGTIFSYLE-KNGYITRSGA 334 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCC-SSEEEEECSS--------------CHHHHHHHHH-HTTEECEETT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCceECCCC-CeEEEEECCC--------------CHHHHHHHHH-HCCeEEEeCc
Confidence 3789999999999999999999984 88876555 5578999874 2567888865 7899999999
Q ss_pred CcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHh
Q psy788 86 AFYSDEHKHLGENLIRYCFFKKDETLREASSILQTW 121 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~ 121 (126)
.|+. ++++|++++ ++++++..++.|.++
T Consensus 335 ~~~~-------~~~iRis~~-~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 335 ALGF-------PTAVRITIG-KEEDNSAVIALLEKL 362 (363)
T ss_dssp TTTC-------TTEEEEECC-CHHHHHHHHHHHHHH
T ss_pred cCCC-------CCeEEEECC-CHHHHHHHHHHHHHh
Confidence 9863 579999998 677889998888765
No 67
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.07 E-value=1.3e-09 Score=79.39 Aligned_cols=99 Identities=12% Similarity=0.062 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
.+++++++.++++++.+.+.|++.|+++.+|.|+ |+|+.++... +..+++..|. ++||.+.|+..+
T Consensus 295 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~~~------------~~~~~~~~l~-~~gi~v~~~~~~ 360 (399)
T 3tqx_A 295 TEGPQLRKQLQENSRYFRAGMEKLGFQLVPGNHP-IIPVMLGDAQ------------LATNMADHLL-QEGIYVVGFSYP 360 (399)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSSS-EEEEEEECHH------------HHHHHHHHHH-HTTEECCEECTT
T ss_pred hccHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCC-EEEEEeCCHH------------HHHHHHHHHH-HCCCEEeeeCCC
Confidence 5688999999999999999999888887766665 6788887531 3668888876 679999997654
Q ss_pred ccCcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhhc
Q psy788 88 YSDEHKHLGENLIRYCFF--KKDETLREASSILQTWRNK 124 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~~ 124 (126)
... .+++++|++++ .+++++++++++|.+++++
T Consensus 361 ~~~----~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 395 (399)
T 3tqx_A 361 VVP----MGKARIRVQMSAVHTQQQLDRAIEAFGQVGKK 395 (399)
T ss_dssp TSC----TTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCC----CCCceEEEEeecCCCHHHHHHHHHHHHHHHHH
Confidence 322 25689999998 3889999999999988763
No 68
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.04 E-value=2.5e-09 Score=77.53 Aligned_cols=89 Identities=12% Similarity=0.044 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC-CCC
Q psy788 9 YFYTISEELRPKREILADALDKAG-MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP-PSA 86 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g-~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p-g~~ 86 (126)
|++++++.++++++.+.+.|++++ +....|.+|+|+|++++. ..++++.| .++||.+.| |+.
T Consensus 264 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~~~L-~~~gI~v~~~g~~ 327 (356)
T 1fg7_A 264 AMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFKA---------------SSAVFKSL-WDQGIILRDQNKQ 327 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEETT---------------HHHHHHHH-HHTTEECEECTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECCC---------------HHHHHHHH-HHCCEEEEECCCC
Confidence 499999999999999999999875 333456788899999861 45788887 588999999 888
Q ss_pred cccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHh
Q psy788 87 FYSDEHKHLGENLIRYCFFKKDETLREASSILQTW 121 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~ 121 (126)
|+. ++++|++++. ++++++.++.|.++
T Consensus 328 ~~~-------~~~iRis~~~-~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 328 PSL-------SGCLRITVGT-REESQRVIDALRAE 354 (356)
T ss_dssp TTC-------TTEEEEECCC-HHHHHHHHHHHHTC
T ss_pred CCC-------CCeEEEEeCC-HHHHHHHHHHHHhh
Confidence 863 4699999986 67788888888654
No 69
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.04 E-value=1.8e-09 Score=78.12 Aligned_cols=94 Identities=7% Similarity=0.000 Sum_probs=69.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
..|++++++.++++++.+.+.|+++ ++.+.++ +|.|+|++++.. ..++++.|. ++||.+.||+
T Consensus 263 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~g~~~~~~~~~~--------------~~~l~~~l~-~~gi~v~~g~ 326 (364)
T 1lc5_A 263 SAWQQATWHWLREEGARFYQALCQLPLLTVYPG-RANYLLLRCERE--------------DIDLQRRLL-TQRILIRSCA 326 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCC-SSSEEEEEESCT--------------TCCHHHHHH-TTTEECEECT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCC-CCeEEEEECCCc--------------HHHHHHHHH-HCCcEEeeCc
Confidence 4689999999999999999999887 7777654 556788888631 335777765 7799999999
Q ss_pred CcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhh
Q psy788 86 AFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWR 122 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~ 122 (126)
.|+.. .++++|++++. .++++..++.|.+++
T Consensus 327 ~~~~~-----~~~~iRis~~~-~~~~~~l~~~l~~~~ 357 (364)
T 1lc5_A 327 NYPGL-----DSRYYRVAIRS-AAQNERLLAALRNVL 357 (364)
T ss_dssp TSTTC-----CTTEEEEECCC-HHHHHHHHHHHHHHC
T ss_pred ccCCC-----CCCEEEEEeCC-HHHHHHHHHHHHHHh
Confidence 98642 36899999986 334445555554443
No 70
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.00 E-value=3.5e-09 Score=77.45 Aligned_cols=95 Identities=12% Similarity=0.053 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcccC
Q psy788 11 YTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYSD 90 (126)
Q Consensus 11 ~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~ 90 (126)
+.+++.++++++.+.+.|++.|+++. |.+|.|+|++++.. . +..++.+.|. ++||.+.||+.|+..
T Consensus 299 ~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~---~---------~~~~l~~~l~-~~gi~v~~~~~~~~~ 364 (401)
T 1fc4_A 299 SELRDRLWANARQFREQMSAAGFTLA-GADHAIIPVMLGDA---V---------VAQKFARELQ-KEGIYVTGFFYPVVP 364 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCBC-CSSSSEEEEEEECH---H---------HHHHHHHHHH-HTTEECCEECTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccc-CCCCCEEEEEcCCh---H---------HHHHHHHHHH-HCCcEEeeecCCCCC
Confidence 57889999999999999998887776 56777899998742 1 3567888865 679999999887643
Q ss_pred cccCCCCCeEEEEee--CChhHHHHHHHHHHHhhh
Q psy788 91 EHKHLGENLIRYCFF--KKDETLREASSILQTWRN 123 (126)
Q Consensus 91 ~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~ 123 (126)
.+.+++|++++ .+++++++++++|.++++
T Consensus 365 ----~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 395 (401)
T 1fc4_A 365 ----KGQARIRTQMSAAHTPEQITRAVEAFTRIGK 395 (401)
T ss_dssp ----TTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred ----CCCceEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 24679999998 388999999999988765
No 71
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.00 E-value=2.4e-09 Score=76.65 Aligned_cols=97 Identities=5% Similarity=-0.075 Sum_probs=78.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-cceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVIPD-GGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~-gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
.+++++++.++++++.+.+.|++.|+++..|+ ++.++|++++.. . +..++++.|. ++||.+.||+.
T Consensus 248 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~l~-~~gi~v~~~~~ 314 (352)
T 1iug_A 248 PRLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPEG---V---------PYARVKEAFA-QRGAVIAGGQG 314 (352)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCEEEECCTT---C---------CHHHHHHHHH-TTTEECEECCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCcccccccCCeEEEEEcCCC---C---------CHHHHHHHHH-HCCEEEEeCCC
Confidence 45788999999999999999988888877775 788999998742 1 3667888875 77999999983
Q ss_pred cccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhhc
Q psy788 87 FYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWRNK 124 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~~ 124 (126)
+. .++++|++++. +++++++++++|.+++++
T Consensus 315 ~~-------~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 347 (352)
T 1iug_A 315 PL-------KGKVFRLSLMGAYDRYEALGVAGMFREVLEE 347 (352)
T ss_dssp GG-------TTTEEEECCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cc-------CCCEEEEEccccCCHHHHHHHHHHHHHHHHH
Confidence 21 36899999995 688999999999887653
No 72
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.00 E-value=7.1e-09 Score=75.09 Aligned_cols=95 Identities=12% Similarity=-0.001 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---ceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 9 YFYTISEELRPKREILADALDKAGMVPVIPDG---GYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~g---g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
+++++++.++++++.+.+.|+++|+++..|++ +.++|++++.. . +..++++.|. ++||.+.||+
T Consensus 278 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~l~-~~gi~v~~~~ 344 (386)
T 2dr1_A 278 GKEKWLEMYEKRAKMVREGVREIGLDILAEPGHESPTITAVLTPPG---I---------KGDEVYEAMR-KRGFELAKGY 344 (386)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEECCTT---C---------CHHHHHHHHH-HTTEECEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCeeCcCccccCCceEEEEcCCC---C---------CHHHHHHHHH-HCCeEEecCc
Confidence 37789999999999999999988888777753 77899998742 1 3667888876 5599999998
Q ss_pred CcccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 86 AFYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
.|. ..+++|++++. +++++++++++|.++++
T Consensus 345 ~~~-------~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 377 (386)
T 2dr1_A 345 GSV-------KEKTFRIGHMGYMKFEDIQEMLDNLREVIN 377 (386)
T ss_dssp GGG-------TTTEEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred ccc-------CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 653 35799999994 88999999999988765
No 73
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=98.99 E-value=5.8e-09 Score=75.99 Aligned_cols=97 Identities=8% Similarity=0.000 Sum_probs=75.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---ceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVIPDG---GYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~g---g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
.+++++++.++++++.+.+.|++.|+++..|+| +.++|+.++.. . +..++++.|.++.||.+.||
T Consensus 291 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~l~~~~gi~v~~g 358 (393)
T 1vjo_A 291 EGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDG---V---------DGKAVARRLLNEHNIEVGGG 358 (393)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTT---C---------CHHHHHHHHHHHHCEECEEC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCcccCCccccCCcEEEEEcCCC---C---------CHHHHHHHHHhhCCEEEecC
Confidence 367889999999999999999888888877765 34677777632 1 36678888764449999999
Q ss_pred CCcccCcccCCCCCeEEEEe-e--CChhHHHHHHHHHHHhhh
Q psy788 85 SAFYSDEHKHLGENLIRYCF-F--KKDETLREASSILQTWRN 123 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~-~--~~~e~i~~~~~~l~~~~~ 123 (126)
+.|. .++++|+++ + .+++.+++++++|.++++
T Consensus 359 ~~~~-------~~~~iRis~~~~~~~~~~i~~~~~~l~~~l~ 393 (393)
T 1vjo_A 359 LGEL-------AGKVWRVGLMGFNSRKESVDQLIPALEQVLR 393 (393)
T ss_dssp CGGG-------TTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred cccc-------CCCEEEEeCCccCChHHHHHHHHHHHHHHhC
Confidence 9775 257999994 3 366779999999988763
No 74
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=98.99 E-value=9.3e-09 Score=74.31 Aligned_cols=94 Identities=14% Similarity=0.112 Sum_probs=73.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
..|++++++.++++++.+.+.|.++++.+.++ +|.|+|+.++.. +..++.+.| .++||.+.||+.
T Consensus 260 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~-------------~~~~l~~~l-~~~gi~v~~~~~ 324 (360)
T 3hdo_A 260 QAYLSECCRRIRETREWFTTELRSIGYDVIPS-QGNYLFATPPDR-------------DGKRVYDGL-YARKVLVRHFSD 324 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEECCC-SSSEEEEECTTC-------------CHHHHHHHH-HHTTEECBCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEcCC-CccEEEEECCCC-------------CHHHHHHHH-HHCCEEEEECCC
Confidence 56899999999999999999999888877655 555888887642 366788876 588999999876
Q ss_pred cccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 87 FYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
+. .++++|+++++ +++++..++.|.++.+
T Consensus 325 ~~-------~~~~iRis~~~-~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 325 PL-------LAHGMRISIGT-REEMEQTLAALKEIGE 353 (360)
T ss_dssp TT-------TTTSEEEECCC-HHHHHHHHHHHHHHHC
T ss_pred CC-------CCCEEEEEcCC-HHHHHHHHHHHHHHhc
Confidence 22 46899999994 6667777777776654
No 75
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=98.97 E-value=4.1e-09 Score=77.13 Aligned_cols=97 Identities=7% Similarity=-0.009 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCccc
Q psy788 10 FYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYS 89 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~ 89 (126)
++++++.++++++.+.+.|.+.|+++..|.|+ ++|++++.. . +..++++.|+.+.||.+.|+..|+.
T Consensus 300 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~~---~---------~~~~~~~~L~~~~gi~v~~~~~~~~ 366 (401)
T 2bwn_A 300 GQKLRDAQQMHAKVLKMRLKALGMPIIDHGSH-IVPVVIGDP---V---------HTKAVSDMLLSDYGVYVQPINFPTV 366 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCBCCCSSS-CEEEECCCH---H---------HHHHHHHHHHHHHCEECCEECTTTS
T ss_pred cHHHHHHHHHHHHHHHHHHHHCCCcccCCCCC-eEEEEeCCh---H---------HHHHHHHHHHhcCCEEEeecCCCCC
Confidence 47889999999999999998878888778887 788988742 1 3567888875578999999987764
Q ss_pred CcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 90 DEHKHLGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 90 ~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
. .+.+++|++++. ++++++.++++|.++++
T Consensus 367 ~----~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~ 398 (401)
T 2bwn_A 367 P----RGTERLRFTPSPVHDLKQIDGLVHAMDLLWA 398 (401)
T ss_dssp C----TTCCEEEECCCTTSCHHHHHHHHHHHHHHC-
T ss_pred C----CCCceEEEEeeCCCCHHHHHHHHHHHHHHHH
Confidence 2 145799999994 88899999999988765
No 76
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=98.96 E-value=1.2e-08 Score=73.13 Aligned_cols=95 Identities=6% Similarity=-0.002 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCC---CcceEEEEeeCCc-ccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 10 FYTISEELRPKREILADALDKAGMVPVIP---DGGYFMVADWTQL-RPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~g~~~~~p---~gg~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
++++++.++++++.+.+.|+++|+++..| .+|+++|++++.. . . +..++.+.|. ++||.+.||+
T Consensus 264 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~l~-~~gi~v~~~~ 331 (366)
T 1m32_A 264 VAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQ--Y---------RFSEFYRRLK-EQGFVIYPGK 331 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTT--C---------CHHHHHHHHH-HTTEECEECC
T ss_pred HhHHHHHHHHHHHHHHHHHHHCCCeeccCchhcCceEEEEEcCccCC--C---------CHHHHHHHHH-HCCEEEECCc
Confidence 67789999999999999998877776554 4788999998741 1 1 3667888875 6799999998
Q ss_pred CcccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhhc
Q psy788 86 AFYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWRNK 124 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~~ 124 (126)
.|. .+++|++++. ++++++.++++|.+++++
T Consensus 332 ~~~--------~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 332 VSQ--------SDCFRIGNIGEVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp CSS--------SCEEEEECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred CCC--------CCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 772 4789999995 688999999999887653
No 77
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=98.95 E-value=1.1e-08 Score=74.17 Aligned_cols=92 Identities=12% Similarity=-0.069 Sum_probs=74.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
.+|++++++.++++++.+.+.|.+.|+++.+ .+|.|+|++++. +..++.+.| .++||.+.||
T Consensus 277 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~--------------~~~~l~~~l-~~~gi~v~~~-- 338 (369)
T 3cq5_A 277 SADTLGTVEKLSVERVRVAARLEELGYAVVP-SESNFVFFGDFS--------------DQHAAWQAF-LDRGVLIRDV-- 338 (369)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHTCEEEC-CSSSEEEEECCS--------------SHHHHHHHH-HHTTEECBCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEECC-CCCeEEEEECCC--------------CHHHHHHHH-HHCCEEEEEC--
Confidence 3588999999999999999999877888764 456688998862 256788886 5889999998
Q ss_pred cccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhcC
Q psy788 87 FYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNKN 125 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~~ 125 (126)
+ .++++|++++ ++++++..++.|.+++..|
T Consensus 339 -~-------~~~~iRis~~-~~~~i~~~~~~l~~~~~~~ 368 (369)
T 3cq5_A 339 -G-------IAGHLRTTIG-VPEENDAFLDAAAEIIKLN 368 (369)
T ss_dssp -S-------CTTEEEEECC-CHHHHHHHHHHHHHHHTTC
T ss_pred -C-------CCCeEEEEeC-CHHHHHHHHHHHHHHHhcc
Confidence 2 2578999999 5778899999999888765
No 78
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=98.94 E-value=1.4e-08 Score=73.65 Aligned_cols=96 Identities=9% Similarity=-0.010 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCCC----cceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 9 YFYTISEELRPKREILADALDKAGMVPVIPD----GGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~----gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
+++.+++.++++++.+.+.|+++|+++..|+ +++++|+.++.. . +..++.+.|+++.||.+.||
T Consensus 284 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~l~~~~gi~v~~g 351 (393)
T 3kgw_A 284 GLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPAG---Y---------NWRDIVSYVLDHFSIEISGG 351 (393)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCTT---B---------CHHHHHHHHHHHHCEECBCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCCCC---C---------CHHHHHHHHHHhCCEEEeCC
Confidence 4788999999999999999998887776444 367888888752 1 36688888765559999999
Q ss_pred CCcccCcccCCCCCeEEEEe-eC--ChhHHHHHHHHHHHhhh
Q psy788 85 SAFYSDEHKHLGENLIRYCF-FK--KDETLREASSILQTWRN 123 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~-~~--~~e~i~~~~~~l~~~~~ 123 (126)
+.+. ..+++|+++ +. +++++++++++|.++++
T Consensus 352 ~~~~-------~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~ 386 (393)
T 3kgw_A 352 LGPT-------EERVLRIGLLGYNATTENVDRVAEALREALQ 386 (393)
T ss_dssp CGGG-------TTTEEEEECCGGGCCHHHHHHHHHHHHHHHH
T ss_pred cccC-------CCCEEEEEecccCCCHHHHHHHHHHHHHHHH
Confidence 8543 357999998 63 78999999999998876
No 79
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=98.94 E-value=1.2e-08 Score=72.93 Aligned_cols=94 Identities=7% Similarity=-0.026 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCCC--cceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 10 FYTISEELRPKREILADALDKAGMVPVIPD--GGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~--gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
++++++.++++++.+.+.|++.|+++..|. +++++|++++.. . +..++.+.|. ++||.+.||+.|
T Consensus 253 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~l~-~~gi~v~~g~~~ 319 (353)
T 2yrr_A 253 VAARERRAREVYAWVLEELKARGFRPYPKASPLPTVLVVRPPEG---V---------DADRLVRALY-AEGVAVAGGIGP 319 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBCTTEEEEECCTT---C---------CHHHHHHHHH-HTTEECEECCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCccccCccCCCeEEEEECCCC---C---------CHHHHHHHHH-HCCEEEeCCccc
Confidence 678899999999999999988777776554 788888988632 1 3667888875 669999999977
Q ss_pred ccCcccCCCCCeEEEEee-C-ChhHHH-HHHHHHHHhhh
Q psy788 88 YSDEHKHLGENLIRYCFF-K-KDETLR-EASSILQTWRN 123 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~-~-~~e~i~-~~~~~l~~~~~ 123 (126)
.. ++++|+++. . ++++++ .++++|.++++
T Consensus 320 ~~-------~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 320 TR-------GQVLRLGLMGEGARREAYQAFLKALDRALA 351 (353)
T ss_dssp GT-------TTCEEEECSGGGSCHHHHHHHHHHHHHHHH
T ss_pred cC-------CCeEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 42 578999994 3 677777 99999988764
No 80
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=98.93 E-value=1.2e-08 Score=74.27 Aligned_cols=97 Identities=10% Similarity=-0.072 Sum_probs=77.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcc----eEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVIPDGG----YFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
.+++++++.++++++.+.+.|+++|+++..|+++ .++|+.++.. . +..++.+.|+++.||.+.|
T Consensus 278 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~L~~~~gi~v~~ 345 (396)
T 2ch1_A 278 EGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKG---V---------DWWKVSQYAMNNFSLEVQG 345 (396)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTT---C---------CHHHHHHHHHHHHCBCCBC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHCCCeeccCCccccCCceEEEEcCCC---C---------CHHHHHHHHHHhCCEEEec
Confidence 4678899999999999999998888888777764 4788888642 1 3668888876556999999
Q ss_pred CCCcccCcccCCCCCeEEEEe-eC--ChhHHHHHHHHHHHhhh
Q psy788 84 PSAFYSDEHKHLGENLIRYCF-FK--KDETLREASSILQTWRN 123 (126)
Q Consensus 84 g~~f~~~~~~~~~~~~~Rl~~-~~--~~e~i~~~~~~l~~~~~ 123 (126)
|..+. .++++|+++ +. ++++++.++++|.++++
T Consensus 346 g~~~~-------~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~ 381 (396)
T 2ch1_A 346 GLGPT-------FGKAWRVGIMGECSTVQKIQFYLYGFKESLK 381 (396)
T ss_dssp CCGGG-------TTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred Ccccc-------CCCEEEEECCCCcCCHHHHHHHHHHHHHHHH
Confidence 87543 357999999 42 78889999999988775
No 81
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=98.93 E-value=1.8e-08 Score=71.90 Aligned_cols=91 Identities=14% Similarity=0.143 Sum_probs=66.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
.++.+.++.+.++++.+.+.|+++|+++.+|+|+ |+|+..+. ..++.+.| .++||.+.||+.|
T Consensus 245 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~---------------~~~~~~~l-~~~gi~v~~g~~~ 307 (337)
T 3p1t_A 245 RAREAHIAKTLAQRRRVADALRGLGYRVASSEAN-FVLVENAA---------------GERTLRFL-RERGIQVKDAGQF 307 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCSSS-EEEEECTT---------------THHHHHHH-HHTTEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCcCEECCCCCe-EEEEEcCC---------------HHHHHHHH-HHCCeEEEECccC
Confidence 3566667777888899999999888888888777 55555542 33455554 6889999999999
Q ss_pred ccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 88 YSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
+. ++++|++++. +++++..++.|.++.+
T Consensus 308 ~~-------~~~iRis~~~-~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 308 GL-------HHHIRISIGR-EEDNDRLLAALAEYSD 335 (337)
T ss_dssp TC-------CSEEEEECCC-HHHHHHHHHHHHHHTC
T ss_pred CC-------CCeEEEecCC-HHHHHHHHHHHHHHhh
Confidence 63 5799999995 5566777776666543
No 82
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=98.91 E-value=2.3e-08 Score=73.03 Aligned_cols=104 Identities=13% Similarity=0.029 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccC-CCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVI-PDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~-p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
.+++.+++.++++++.+.+.|++.|+++.. |.+|+|+|++++..+ . +..++.+.| .++||.+.||+.
T Consensus 277 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~l-~~~gi~v~~~~~ 344 (407)
T 2dkj_A 277 PEFKEYSRLVVENAKRLAEELARRGYRIVTGGTDNHLFLVDLRPKG--L---------TGKEAEERL-DAVGITVNKNAI 344 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGT--C---------CHHHHHHHH-HHTTEECEECCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCceeecCCCCceEEEEECcccC--C---------CHHHHHHHH-HHcCceecCCcC
Confidence 578899999999999999999988877754 467889999987421 1 355777776 689999999987
Q ss_pred cccCcccCCCCCeEEEEee------CChhHHHHHHHHHHHhhhc
Q psy788 87 FYSDEHKHLGENLIRYCFF------KKDETLREASSILQTWRNK 124 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~------~~~e~i~~~~~~l~~~~~~ 124 (126)
|..... ...++++|++++ .++++++.++++|.+++++
T Consensus 345 ~~~~~~-~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 345 PFDPKP-PRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp TTCSSC-TTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred cccccc-ccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 621100 013578999995 5788899999999887653
No 83
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=98.91 E-value=3.3e-09 Score=78.35 Aligned_cols=85 Identities=13% Similarity=0.190 Sum_probs=69.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe
Q psy788 7 KCYFYTISEELRPKREILADALDKA----GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI 82 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~----g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~ 82 (126)
++|++++++.|+++++.+.+.|+++ ++.+..|+||||+|+.++ ...+ ..++.+.||.+.
T Consensus 331 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~----------------~~~~-~~~l~~~gI~v~ 393 (420)
T 4f4e_A 331 VQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLT----------------SAQV-DRLREEFGIYAV 393 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCC----------------HHHH-HHHHHHHCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCC----------------HHHH-HHHHHhCCEEec
Confidence 5679999999999999999999986 688888999999998664 2233 344568899998
Q ss_pred CCCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 83 PPSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 83 pg~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
|+ .|++++. +++++++++++|.++++
T Consensus 394 ~~---------------~Ris~~~~~~~~i~~~~~~l~~~l~ 420 (420)
T 4f4e_A 394 ST---------------GRICVAALNTRNLDVVANAIAAVLK 420 (420)
T ss_dssp TT---------------SEEEGGGCCTTTHHHHHHHHHHHHC
T ss_pred CC---------------CeEEEecCCHHHHHHHHHHHHHHhC
Confidence 83 1999997 77889999999988763
No 84
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=98.90 E-value=3.4e-09 Score=77.34 Aligned_cols=83 Identities=10% Similarity=0.148 Sum_probs=68.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe
Q psy788 7 KCYFYTISEELRPKREILADALDKA----GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI 82 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~----g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~ 82 (126)
..|++++++.|+++++.+.+.|+++ ++.+..|++|+|+|++++ ...+. .++.++||.+.
T Consensus 309 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~-~~l~~~gi~v~ 371 (397)
T 3fsl_A 309 LKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS----------------AAQVD-RLREEFGVYLI 371 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCC----------------HHHHH-HHHHTTCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCC----------------HHHHH-HHHHhCCEEEC
Confidence 5789999999999999999999986 688888999999998764 22343 44678999998
Q ss_pred CCCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHh
Q psy788 83 PPSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTW 121 (126)
Q Consensus 83 pg~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~ 121 (126)
||+ |++++. +++++++++++|.++
T Consensus 372 ~g~---------------Ris~~~~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 372 ASG---------------RMCVAGLNTANVQRVAKAFAAV 396 (397)
T ss_dssp TTC---------------EEEGGGCCTTTHHHHHHHHHHH
T ss_pred CCC---------------eEEEEecCHhhHHHHHHHHHhh
Confidence 852 999997 788899999999875
No 85
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=98.90 E-value=1.4e-08 Score=75.28 Aligned_cols=97 Identities=10% Similarity=-0.000 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccc-CCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcc
Q psy788 10 FYTISEELRPKREILADALDKAGMVPV-IPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFY 88 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~g~~~~-~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~ 88 (126)
+..+++.++++++.+.+.|++.|+++. ++..|.++|+.++... +..++++.|. ++||.+.||..|+
T Consensus 314 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~L~-~~Gi~v~~~~~~~ 380 (427)
T 2w8t_A 314 AHEKRERLWSNARALHGGLKAMGFRLGTETCDSAIVAVMLEDQE------------QAAMMWQALL-DGGLYVNMARPPA 380 (427)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCEESCSSCCSSEEEEEESSHH------------HHHHHHHHHH-HTTEECEEECTTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCCCEEEEEECCHH------------HHHHHHHHHH-HCCeEEeeeCCCC
Confidence 477899999999999999988788876 5524568899987521 3667888875 6699999998886
Q ss_pred cCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 89 SDEHKHLGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 89 ~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
.. .+.+++|++++. ++++++.++++|.++++
T Consensus 381 ~~----~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~ 413 (427)
T 2w8t_A 381 TP----AGTFLLRCSICAEHTPAQIQTVLGMFQAAGR 413 (427)
T ss_dssp SC----TTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CC----CCCeEEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 53 246799999996 88999999999988765
No 86
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=98.90 E-value=3.2e-09 Score=79.40 Aligned_cols=86 Identities=13% Similarity=0.175 Sum_probs=71.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC---C------CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCC
Q psy788 8 CYFYTISEELRPKREILADALDKA---G------MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVK 78 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~---g------~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 78 (126)
++++.++++|+++|+.+.+.|.++ + +.+..|++|||+|+.++ . +++..++.+.|
T Consensus 348 ~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----------------~-~~~~~ll~~~g 410 (448)
T 3meb_A 348 DNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT----------------P-EHVDYLKEKWS 410 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCC----------------H-HHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCC----------------H-HHHHHHHHhCC
Confidence 458999999999999999999887 3 66778999999998664 1 45566677889
Q ss_pred eeEeCCCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhhc
Q psy788 79 LQGIPPSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRNK 124 (126)
Q Consensus 79 V~v~pg~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~~ 124 (126)
|.+.||+ .||||+. +.+++++++++|.+++++
T Consensus 411 V~v~~G~--------------gRis~a~~~~~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 411 IYLVKAG--------------GRMSMCGLTESNCDYVAEAIHDAVTK 443 (448)
T ss_dssp EEECSGG--------------GEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred EEEeCCC--------------cEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 9999974 1999997 888899999999988763
No 87
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=98.89 E-value=3.3e-09 Score=77.66 Aligned_cols=84 Identities=12% Similarity=0.101 Sum_probs=67.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe
Q psy788 7 KCYFYTISEELRPKREILADALDKAG----MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI 82 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g----~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~ 82 (126)
.+|++++++.|+++|+.+.+.|.+++ +++..|+||||+|+.++ . +++..++.++||.+.
T Consensus 312 ~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------------~-~~~~~ll~~~gi~v~ 374 (401)
T 7aat_A 312 LVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLK----------------P-EQVERLTKEFSIYMT 374 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCC----------------H-HHHHHHHHHHCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCC----------------H-HHHHHHHHhCCEecc
Confidence 56789999999999999999998874 77788999999998654 2 233566678899986
Q ss_pred CCCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhh
Q psy788 83 PPSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWR 122 (126)
Q Consensus 83 pg~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~ 122 (126)
|+ +|++|+. +.++++.+++.|.+++
T Consensus 375 ~~---------------~Ris~~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 375 KD---------------GRISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp TT---------------CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred CC---------------CeEEeccCChhhHHHHHHHHHHHh
Confidence 42 5999985 6666999999998765
No 88
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=98.89 E-value=2.6e-08 Score=72.40 Aligned_cols=96 Identities=11% Similarity=-0.022 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCCC---cceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 9 YFYTISEELRPKREILADALDKAGMVPVIPD---GGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~---gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
.+..+++.++++++.+.+.|.+.|+++..|. +++++|++++.. . +..++.+.|..+.||.+.||+
T Consensus 280 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~L~~~~gi~v~~g~ 347 (393)
T 2huf_A 280 GLPALIARHEDCAKRLYRGLQDAGFELYADPKDRLSTVTTIKVPQG---V---------DWLKAAQYAMKTYLVEISGGL 347 (393)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCTTEEEEECCTT---C---------CHHHHHHHHHHHHCEECBCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCeeccCccccCCcEEEEEcCCC---C---------CHHHHHHHHHHhCCEEEecCc
Confidence 3677889999999999999988887776663 466888888632 1 366788887655699999998
Q ss_pred CcccCcccCCCCCeEEEEe-e--CChhHHHHHHHHHHHhhh
Q psy788 86 AFYSDEHKHLGENLIRYCF-F--KKDETLREASSILQTWRN 123 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~-~--~~~e~i~~~~~~l~~~~~ 123 (126)
.|. ..+++|+++ + .++++++.++++|.++++
T Consensus 348 ~~~-------~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~ 381 (393)
T 2huf_A 348 GPT-------AGQVFRIGLMGQNATTERVDRVLQVFQEAVA 381 (393)
T ss_dssp GGG-------TTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred ccc-------cCCEEEEEcccCcCCHHHHHHHHHHHHHHHH
Confidence 764 357999999 6 267789999999988765
No 89
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=98.89 E-value=1e-08 Score=73.52 Aligned_cols=87 Identities=15% Similarity=0.139 Sum_probs=69.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
.+|++++++.++++++.+.+.|.++|+.+. |.+|+|+|++++.. +..+++..|. ++||.+.|
T Consensus 248 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~-------------~~~~~~~~l~-~~gi~v~~--- 309 (335)
T 1uu1_A 248 REIFEERTKFIVEERERMKSALREMGYRIT-DSRGNFVFVFMEKE-------------EKERLLEHLR-TKNVAVRS--- 309 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCBC-CCCSSEEEEECCTH-------------HHHHHHHHHH-HHTEEEEE---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCcEEc-CCCCeEEEEECCCC-------------CHHHHHHHHH-HCCEEEEE---
Confidence 358999999999999999999988777664 56678999998741 3567888875 77999998
Q ss_pred cccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHh
Q psy788 87 FYSDEHKHLGENLIRYCFFKKDETLREASSILQTW 121 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~ 121 (126)
. ++++|++++. ++++++++++|.++
T Consensus 310 -~--------~~~iRis~~~-~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 310 -F--------REGVRITIGK-REENDMILRELEVF 334 (335)
T ss_dssp -E--------TTEEEEECCC-HHHHHHHHHHHHCC
T ss_pred -C--------CCeEEEEeCC-HHHHHHHHHHHHhh
Confidence 1 3689999987 45688888888754
No 90
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=98.88 E-value=7.8e-09 Score=77.26 Aligned_cols=85 Identities=16% Similarity=0.156 Sum_probs=67.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe
Q psy788 7 KCYFYTISEELRPKREILADALDKAG----MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI 82 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g----~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~ 82 (126)
..+++.|+++|+++|+.+.+.|.+.| +.+..+++|||.|+.++ . +.++. +++.||.++
T Consensus 327 ~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls----------------~-e~v~~-L~e~~Vy~~ 388 (420)
T 4h51_A 327 EAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLS----------------K-AQCEY-CQNHNIFIT 388 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCC----------------H-HHHHH-HHHTTEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcC----------------H-HHHHH-HHhCCEEEc
Confidence 35688999999999999999999873 56678899999996443 2 22354 468899877
Q ss_pred CCCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhhc
Q psy788 83 PPSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRNK 124 (126)
Q Consensus 83 pg~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~~ 124 (126)
|| + ||||+. +++.++..+++|.+++++
T Consensus 389 ~~-----------g----Ris~Agl~~~ni~~~a~aI~~vvr~ 416 (420)
T 4h51_A 389 VS-----------G----RANMAGLTHETALMLAQTINDAVRN 416 (420)
T ss_dssp TT-----------C----EEEGGGCCHHHHHHHHHHHHHHHC-
T ss_pred CC-----------C----EEEeccCCHHHHHHHHHHHHHHHHH
Confidence 63 1 999997 999999999999888763
No 91
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=98.87 E-value=5.7e-09 Score=75.88 Aligned_cols=95 Identities=6% Similarity=-0.104 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcc
Q psy788 9 YFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFY 88 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~ 88 (126)
+++++++.++++++.+.+.|+++|+++.+ .+|.++|++++.. . +..++.+.|. ++||.+.||+.|+
T Consensus 287 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~---~---------~~~~l~~~l~-~~gi~v~~~~~~~ 352 (384)
T 1bs0_A 287 EGDARREKLAALITRFRAGVQDLPFTLAD-SCSAIQPLIVGDN---S---------RALQLAEKLR-QQGCWVTAIRPPT 352 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSCEECS-CCSSBCCEEEESH---H---------HHHHHHHHHH-HTTEECCEECTTS
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCCcccC-CCCCEEEEEeCCH---H---------HHHHHHHHHH-HCCcEEEeecCCC
Confidence 66789999999999999999888877764 5566778888642 1 3667888875 6799999999876
Q ss_pred cCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHh
Q psy788 89 SDEHKHLGENLIRYCFFK--KDETLREASSILQTW 121 (126)
Q Consensus 89 ~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~ 121 (126)
.. .+.+++|++++. +++++++++++|.++
T Consensus 353 ~~----~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 353 VP----AGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp SC----TTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred CC----CCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 42 246899999995 789999999998764
No 92
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=98.87 E-value=1.7e-08 Score=73.77 Aligned_cols=97 Identities=9% Similarity=-0.044 Sum_probs=75.3
Q ss_pred hH-HHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---ceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 8 CY-FYTISEELRPKREILADALDKAGMVPVIPDG---GYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 8 ~~-l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~g---g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
.+ ++++++.++++++.+.+.|.+.|+++..|++ +.++|+.++.. . +..++.+.|.++.||.+.|
T Consensus 285 ~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~l~~~L~~~~gi~v~~ 352 (416)
T 3isl_A 285 EEGLETRFERHRHHEAALAAGIKAMGLRLFGDDSCKMPVVTCVEIPGG---I---------DGESVRDMLLAQFGIEIAS 352 (416)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCTTEEEEECCTT---C---------CHHHHHHHHHHHHCEECBC
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHcCCEeccCccccCCcEEEEeCCCC---C---------CHHHHHHHHHHhCCEEEec
Confidence 34 7899999999999999999988888777765 67888888642 1 3668888876555999999
Q ss_pred CCCcccCcccCCCCCeEEEEee-C-ChhH-HHHHHHHHHHhhh
Q psy788 84 PSAFYSDEHKHLGENLIRYCFF-K-KDET-LREASSILQTWRN 123 (126)
Q Consensus 84 g~~f~~~~~~~~~~~~~Rl~~~-~-~~e~-i~~~~~~l~~~~~ 123 (126)
|+... ..+++|+++. . +.++ +++++++|.++++
T Consensus 353 g~~~~-------~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~ 388 (416)
T 3isl_A 353 SFGPL-------AGKIWRIGTMGYSCRKENVLFVLAGLEAVLL 388 (416)
T ss_dssp CCSTT-------TTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred CCCCC-------CCCEEEEecccCCCcHHHHHHHHHHHHHHHH
Confidence 87322 4689999993 2 4444 9999999998876
No 93
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=98.86 E-value=2.2e-08 Score=73.13 Aligned_cols=103 Identities=17% Similarity=0.129 Sum_probs=78.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-CcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVIP-DGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p-~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
.+++.+++.++++++.+.+.|++.|+++..| .+|+++|++++..+ . +..++.+.| .++||.+.||+.
T Consensus 276 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~l-~~~gi~v~~g~~ 343 (405)
T 2vi8_A 276 DDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQ--L---------TGKTAEKVL-DEVGITVNKNTI 343 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGT--C---------CHHHHHHHH-HHHTEECEEECC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCCceEEEEEccCCC--C---------CHHHHHHHH-HHcCceeccCcC
Confidence 5788999999999999999998888887665 46889999997421 1 255777775 688999999874
Q ss_pred cccCcccCCCCCeEEEEeeC------ChhHHHHHHHHHHHhhh
Q psy788 87 FYSDEHKHLGENLIRYCFFK------KDETLREASSILQTWRN 123 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~------~~e~i~~~~~~l~~~~~ 123 (126)
+..... ...++++|++++. ++++++.++++|.++++
T Consensus 344 ~~~~~~-~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~ 385 (405)
T 2vi8_A 344 PYDPES-PFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLK 385 (405)
T ss_dssp TTCSSC-TTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred ccccCC-CCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHh
Confidence 211000 0135789999984 68999999999998876
No 94
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=98.86 E-value=5e-09 Score=77.03 Aligned_cols=84 Identities=11% Similarity=0.072 Sum_probs=68.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 8 CYFYTISEELRPKREILADALDKAG----MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g----~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
.+++++++.|+++++.+.+.|.+.| +++..|+||||+|+.++ . +++..+++++||.+.|
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~----------------~-~~~~~ll~~~gv~v~p 383 (409)
T 4eu1_A 321 KELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGMMAYTGLT----------------R-EQVELLRSEYHIYMTL 383 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCCC----------------H-HHHHHHHHHHCEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceEEEEeCCC----------------H-HHHHHHHHcCCEEEcC
Confidence 4588999999999999999999876 78888999999996543 2 3456677788999887
Q ss_pred CCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 84 PSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 84 g~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
| .|++++. ++++++..++.|.++++
T Consensus 384 ~---------------~Ri~~~~~~~~~i~~~~~~l~~~l~ 409 (409)
T 4eu1_A 384 N---------------GRAAVSGLNSTNVEYVSQAIHNVTK 409 (409)
T ss_dssp T---------------CEEEGGGCCTTTHHHHHHHHHHHHC
T ss_pred C---------------CEEEEEecCHhhHHHHHHHHHHHhC
Confidence 4 2888885 77779999999987753
No 95
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=98.85 E-value=1.1e-08 Score=73.71 Aligned_cols=91 Identities=10% Similarity=-0.092 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHhC-CCccc-CCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcccCcc
Q psy788 15 EELRPKREILADALDKA-GMVPV-IPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYSDEH 92 (126)
Q Consensus 15 ~~~~~r~~~l~~~l~~~-g~~~~-~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~ 92 (126)
+.+.++++.+.+.|.++ |+++. .|.++.|+|++++.... .+..++.+.| .++||.+.||+.|+..
T Consensus 261 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~l-~~~GV~v~~g~~~~~~-- 327 (359)
T 3pj0_A 261 AEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSAD----------EIGAILTKIQ-DETGVGISGYLQEKSA-- 327 (359)
T ss_dssp HHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHH----------HHHHHHHHHH-HHHCEECCSCCEEEET--
T ss_pred HHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccc----------hhHHHHHHHH-HhcCcEecCCccccCC--
Confidence 34788888999999988 78874 67788899999875310 0245677775 5889999999988753
Q ss_pred cCCCCCeEEEEee-----CChhHHHHHHHHHHHh
Q psy788 93 KHLGENLIRYCFF-----KKDETLREASSILQTW 121 (126)
Q Consensus 93 ~~~~~~~~Rl~~~-----~~~e~i~~~~~~l~~~ 121 (126)
+.+++|++++ .+.+.+++++++|.+.
T Consensus 328 ---~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 328 ---DVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp ---TEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred ---CceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 4689999886 3678999999999865
No 96
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=98.85 E-value=2e-08 Score=72.96 Aligned_cols=95 Identities=6% Similarity=-0.140 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCCC----cceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 10 FYTISEELRPKREILADALDKAGMVPVIPD----GGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~----gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
++++++.++++++.+.+.|++.|+++..|. ++.++|+.++.. . +..++++.|.++.||.+.||+
T Consensus 268 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~l~~~L~~~~gi~v~~g~ 335 (392)
T 2z9v_A 268 PEAVWARHALTAKAMRAGVTAMGLSVWAASDSIASPTTTAVRTPDG---V---------DEKALRQAARARYGVVFSSGR 335 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCTTEEEEECCTT---C---------CHHHHHHHHHHHHCEECEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCeeccCCccccCCceEEEECCCC---C---------CHHHHHHHHHhcCCEEEecCC
Confidence 677899999999999999988777776533 577889988632 1 366788887644499999998
Q ss_pred CcccCcccCCCCCeEEEEe-e--CChhHHHHHHHHHHHhhh
Q psy788 86 AFYSDEHKHLGENLIRYCF-F--KKDETLREASSILQTWRN 123 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~-~--~~~e~i~~~~~~l~~~~~ 123 (126)
.+. .++++|+++ + .++++++.++++|.++++
T Consensus 336 ~~~-------~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~ 369 (392)
T 2z9v_A 336 GET-------LGKLTRIGHMGPTAQPIYAIAALTALGGAMN 369 (392)
T ss_dssp GGG-------TTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred CCC-------CCCeEEEeCcccccCHHHHHHHHHHHHHHHH
Confidence 653 357999994 6 488999999999988765
No 97
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=98.85 E-value=8.2e-09 Score=74.35 Aligned_cols=96 Identities=8% Similarity=-0.073 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCcc-cCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 9 YFYTISEELRPKREILADALDKA-GMVP-VIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~-g~~~-~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
|++.++ .+.++++.+.+.|.++ |+.+ ..|.+++|+|++++.... . +..++.+.| .++||.+.||..
T Consensus 254 ~~~~~~-~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~~l-~~~Gi~v~~g~~ 321 (357)
T 3lws_A 254 RKDRMG-QYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAA--D--------ISPKLEQVQ-EETGLGFVGYLV 321 (357)
T ss_dssp HTTCHH-HHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHH--H--------HHHHHHHHH-HHHCEESCSCCE
T ss_pred HHHHHH-HHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChH--H--------HHHHHHHHH-HhcCeEEecccc
Confidence 444443 3678888999999988 7887 467888899999975310 0 245677765 588999999976
Q ss_pred cccCcccCCCCCeEEEEee-----CChhHHHHHHHHHHHhh
Q psy788 87 FYSDEHKHLGENLIRYCFF-----KKDETLREASSILQTWR 122 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~-----~~~e~i~~~~~~l~~~~ 122 (126)
|.. +..++|++++ .+.+.+++++++|.+++
T Consensus 322 ~~~------~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 322 DKD------GYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp ECS------SEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred cCC------CceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 652 4579999987 36789999999998765
No 98
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=98.83 E-value=3.1e-08 Score=72.34 Aligned_cols=95 Identities=9% Similarity=-0.045 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---ceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 10 FYTISEELRPKREILADALDKAGMVPVIPDG---GYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~g---g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
++.+++.++++++.+.+.|++.|+++..|++ +.++|+.++.. . +..++.+.|+.+.||.+.||..
T Consensus 288 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~l~~~l~~~~gi~v~~g~~ 355 (411)
T 3nnk_A 288 LDYGIARHKLHGDALVKGIQAMGLETFGDLKHKMNNVLGVVIPQG---I---------NGDQARKLMLEDFGIEIGTSFG 355 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCSSEEEEECCTT---C---------CHHHHHHHHHHHHSEEEEECCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCEeCCCcccccccEEEEECCCC---C---------CHHHHHHHHHHhcCeEEeCccC
Confidence 7889999999999999999988877766664 77889988742 1 3668888876556999999843
Q ss_pred cccCcccCCCCCeEEEEe-eC--ChhHHHHHHHHHHHhhh
Q psy788 87 FYSDEHKHLGENLIRYCF-FK--KDETLREASSILQTWRN 123 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~-~~--~~e~i~~~~~~l~~~~~ 123 (126)
.. ..+++|+++ +. +++++++++++|.++++
T Consensus 356 ~~-------~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~ 388 (411)
T 3nnk_A 356 PL-------HGKVWRIGTMGYNARKDCVMTTLSALEAVLN 388 (411)
T ss_dssp GG-------TTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred CC-------CCCEEEEeCccCcCCHHHHHHHHHHHHHHHH
Confidence 22 357999998 53 68899999999998876
No 99
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=98.82 E-value=7.6e-09 Score=76.02 Aligned_cols=85 Identities=15% Similarity=0.125 Sum_probs=69.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe
Q psy788 7 KCYFYTISEELRPKREILADALDKAG----MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI 82 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g----~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~ 82 (126)
+.|++++++.|+++++.+.+.|++++ +++..|+||||+|+.++ ...+ ..++.+.||.+.
T Consensus 320 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~-~~~l~~~gi~v~ 382 (412)
T 1yaa_A 320 HKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLT----------------PQMV-KRLEETHAVYLV 382 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCC----------------HHHH-HHHHHHHCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCC----------------HHHH-HHHHHhCCEEec
Confidence 35899999999999999999998875 88888999999997543 2344 555667899987
Q ss_pred CCCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 83 PPSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 83 pg~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
| ++|++++. ++++++.++++|.++++
T Consensus 383 ~---------------~~Ris~~~~~~~~i~~~~~~l~~~~~ 409 (412)
T 1yaa_A 383 A---------------SGRASIAGLNQGNVEYVAKAIDEVVR 409 (412)
T ss_dssp T---------------TSEEEGGGCCTTTHHHHHHHHHHHHH
T ss_pred c---------------CcEEEEccCCHhHHHHHHHHHHHHHH
Confidence 6 26999996 88889999999988765
No 100
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=98.82 E-value=4.4e-08 Score=71.94 Aligned_cols=95 Identities=14% Similarity=0.089 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcccC
Q psy788 11 YTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYSD 90 (126)
Q Consensus 11 ~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~ 90 (126)
+.+++.++++++.+.+.|++.++++. .+|+++|+.++... +..++++.|. ++||.+.|+..+...
T Consensus 307 ~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~~~~~~~~------------~~~~~~~~L~-~~Gv~v~~~~~~~~~ 371 (409)
T 3kki_A 307 DNRRQHLDRMARKLRIGLSQLGLTIR--SESQIIGLETGDER------------NTEKVRDYLE-SNGVFGSVFCRPATS 371 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCCC--CSSSEEEEEEESHH------------HHHHHHHHHH-HTTEECEEECTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccC--CCCCEEEEEeCCHH------------HHHHHHHHHH-HCCceEeeeCCCCcC
Confidence 67899999999999999998876654 47889999987531 3567888875 669999996544322
Q ss_pred cccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhhc
Q psy788 91 EHKHLGENLIRYCFFK--KDETLREASSILQTWRNK 124 (126)
Q Consensus 91 ~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~~ 124 (126)
.+++++|++++. +++++++++++|.+++++
T Consensus 372 ----~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 372 ----KNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp ----TTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ----CCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence 257899999984 889999999999988764
No 101
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=98.81 E-value=4.7e-08 Score=70.35 Aligned_cols=103 Identities=14% Similarity=0.035 Sum_probs=72.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCc---ceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe
Q psy788 7 KCYFYTISEELRPKREILADALDKA-GMVPVIPDG---GYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI 82 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~g---g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~ 82 (126)
..+++++++.++++++.+.+.|.++ ++.+..|.+ +.++++.++.. +..++.+.| .++||.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~l-~~~gi~v~ 316 (382)
T 4hvk_A 251 AMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYI-------------EGESIVLSL-DMAGIQAS 316 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTC-------------CHHHHHHHH-HHTTCBCB
T ss_pred HhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECCC-------------CHHHHHHHH-HHCCEEEe
Confidence 4578899999999999999999887 677765554 33666666532 366788876 57899999
Q ss_pred CCCCcccCcccC------C------CCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 83 PPSAFYSDEHKH------L------GENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 83 pg~~f~~~~~~~------~------~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
||+.|+...... . .++++|++++. +.++++..++.|.++++
T Consensus 317 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~ 371 (382)
T 4hvk_A 317 TGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIE 371 (382)
T ss_dssp CC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred eCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 998886531000 0 05899999994 77889999999988765
No 102
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=98.80 E-value=7.2e-08 Score=69.64 Aligned_cols=102 Identities=14% Similarity=0.036 Sum_probs=76.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCc---ceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 8 CYFYTISEELRPKREILADALDKA-GMVPVIPDG---GYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~g---g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
++++.+++.++++++.+.+.|+++ ++++..|.+ +.++|+.++.. +..++.+.|. +.||.+.|
T Consensus 252 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~l~-~~gi~v~~ 317 (382)
T 4eb5_A 252 MEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYI-------------EGESIVLSLD-MAGIQAST 317 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTS-------------CHHHHHHHHH-HHTCBCBC
T ss_pred HhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCCc-------------CHHHHHHHHH-HCCEEEec
Confidence 457889999999999999999887 777766652 44677887631 3667888864 78999999
Q ss_pred CCCcccCccc------------CCCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 84 PSAFYSDEHK------------HLGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 84 g~~f~~~~~~------------~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
|+.|...... ...++++|++++. ++++++.++++|.++++
T Consensus 318 g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (382)
T 4eb5_A 318 GSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIE 371 (382)
T ss_dssp CCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 9876542000 0025799999993 78899999999988765
No 103
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=98.79 E-value=9.2e-08 Score=69.05 Aligned_cols=93 Identities=10% Similarity=-0.078 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCCC----cceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 9 YFYTISEELRPKREILADALDKAGMVPVIPD----GGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~----gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
.++++++.++++++.+.+.|+++|+++..|+ +++++|+.++.. +..++++.|. ++||.+.||
T Consensus 263 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~l~-~~gi~v~~g 328 (384)
T 3zrp_A 263 GIENRIKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVILKVA-------------DPQKVLAGTV-NEGVEFAPG 328 (384)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEECSSS-------------CHHHHHHHHH-TTTCCCEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEECCCC-------------CHHHHHHHHH-HCCEEEecC
Confidence 3788999999999999999998888877776 678889988752 3668888875 679999998
Q ss_pred CCcccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 85 SAFYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
..+. . +++|++++. ++++++.+++.|.++++
T Consensus 329 ~~~~-------~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~ 361 (384)
T 3zrp_A 329 VHPA-------F-KYFRIGHMGWVTPNDAIIAISVIERTLR 361 (384)
T ss_dssp CCTT-------C-CEEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCC-------c-CEEEEeccccCCHHHHHHHHHHHHHHHH
Confidence 7532 2 799999883 78899999999988876
No 104
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=98.79 E-value=7.2e-08 Score=70.63 Aligned_cols=95 Identities=12% Similarity=0.141 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCcccC--C--CcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 10 FYTISEELRPKREILADALDKA-GMVPVI--P--DGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~-g~~~~~--p--~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
++++++.++++++.+.+.|+++ |+++.. | .+++++|++++.. . +..++.+.|. ++||.+.||
T Consensus 296 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~l~~~L~-~~gI~v~~g 362 (398)
T 2fyf_A 296 LDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDD---V---------DAGTVAKILR-ANGIVDTEP 362 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTT---S---------CHHHHHHHHH-HTTCBCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCC---C---------CHHHHHHHHH-HCCcEEecC
Confidence 7788999999999999999988 777653 5 4677999999742 1 3668888875 669999997
Q ss_pred CCcccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhhc
Q psy788 85 SAFYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWRNK 124 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~~ 124 (126)
|... +.+++|++++. ++++++..++.|.+++++
T Consensus 363 --~~~~-----~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 363 --YRKL-----GRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp --CTTT-----CSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred --cccC-----CCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 3221 35799999994 889999999999887753
No 105
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=98.78 E-value=1.6e-08 Score=74.27 Aligned_cols=86 Identities=13% Similarity=0.146 Sum_probs=70.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe
Q psy788 7 KCYFYTISEELRPKREILADALDKAG----MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI 82 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g----~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~ 82 (126)
+.|++++++.|+++++.+.+.|++++ +++..|+||+|+|+.++ . +++..++.++||.+.
T Consensus 320 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------------~-~~~~~~l~~~gv~v~ 382 (412)
T 1ajs_A 320 TGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN----------------P-KQVEYLINQKHIYLL 382 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC----------------H-HHHHHHHHTTCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCC----------------H-HHHHHHHHhCCEEec
Confidence 45889999999999999999999875 78888999999998553 2 344455678999988
Q ss_pred CCCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhhc
Q psy788 83 PPSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRNK 124 (126)
Q Consensus 83 pg~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~~ 124 (126)
|+ +|++++. +++++++++++|.+++++
T Consensus 383 ~~---------------~Ris~~~~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 383 PS---------------GRINMCGLTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp TT---------------SEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred CC---------------cEEEeeeCCHHHHHHHHHHHHHHHHh
Confidence 62 5999995 888999999999988764
No 106
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=98.77 E-value=7.5e-09 Score=75.46 Aligned_cols=84 Identities=10% Similarity=0.181 Sum_probs=67.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe
Q psy788 7 KCYFYTISEELRPKREILADALDKAG----MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI 82 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g----~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~ 82 (126)
++|++++++.|+++++.+.+.|++++ +++..|+||+|+|++++ ...+ ..++.++||.+.
T Consensus 308 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~-~~~l~~~gv~v~ 370 (396)
T 2q7w_A 308 EQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLT----------------KEQV-LRLREEFGVYAV 370 (396)
T ss_dssp HHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCC----------------HHHH-HHHHHHHCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecCC----------------HHHH-HHHHHhcCeeec
Confidence 46899999999999999999999875 78888999999998653 2233 344568899987
Q ss_pred CCCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhh
Q psy788 83 PPSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWR 122 (126)
Q Consensus 83 pg~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~ 122 (126)
|| +|++++. +++++++++++|.+++
T Consensus 371 ~~---------------~Ris~~~~~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 371 AS---------------GRVNVAGMTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp TT---------------CEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred CC---------------ceEEEeecCHHHHHHHHHHHHhcC
Confidence 72 5999996 8889999999998753
No 107
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=98.74 E-value=1e-07 Score=68.82 Aligned_cols=103 Identities=11% Similarity=0.110 Sum_probs=71.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-Cc--ceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIP-DG--GYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p-~g--g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
.++++++++.++++++.+.+.|++.|+++..| .| +.++++.++.. +..++.+.| .+.||.+.|
T Consensus 255 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~l-~~~gi~v~~ 320 (384)
T 1eg5_A 255 VEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNI-------------RGSTLQNLL-SGYGIYVST 320 (384)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTTC-------------CHHHHHHHH-HHTTEECBC
T ss_pred HHhHHHHHHHHHHHHHHHHHHhCCCCeEEeCCcccCCCCEEEEEeCCC-------------CHHHHHHHH-hhCCeEEec
Confidence 35788999999999999999998767777555 33 24566666531 356788886 589999999
Q ss_pred CCCcccCcc-c-------C----CCCCeEEEEee--CChhHHHHHHHHHHHhhh
Q psy788 84 PSAFYSDEH-K-------H----LGENLIRYCFF--KKDETLREASSILQTWRN 123 (126)
Q Consensus 84 g~~f~~~~~-~-------~----~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~ 123 (126)
|+.|+.... + . ...+++|++++ .+++++++++++|.++++
T Consensus 321 g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 374 (384)
T 1eg5_A 321 SSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILS 374 (384)
T ss_dssp ------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 998864200 0 0 01479999999 488999999999988876
No 108
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=98.70 E-value=1.4e-07 Score=67.44 Aligned_cols=88 Identities=8% Similarity=0.075 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcc
Q psy788 10 FYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFY 88 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~ 88 (126)
+.++.+.++++++.+.+.|.++ |+++..|.+++|+|++++. ++++.| .++||.+.||+ |+
T Consensus 262 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~-----------------~~~~~l-~~~gi~v~~g~-~~ 322 (356)
T 1v72_A 262 WLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLDS-----------------AMIDAL-LKAGFGFYHDR-WG 322 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEECH-----------------HHHHHH-HHTTCBCBCSS-SS
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcCH-----------------HHHHHH-HhcCeEEeccc-cC
Confidence 4456777888999999999886 7887778899999987741 466776 47899999987 53
Q ss_pred cCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhhc
Q psy788 89 SDEHKHLGENLIRYCFFK--KDETLREASSILQTWRNK 124 (126)
Q Consensus 89 ~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~~ 124 (126)
++++|++++. +++++++++++|.+++++
T Consensus 323 --------~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~ 352 (356)
T 1v72_A 323 --------PNVVRFVTSFATTAEDVDHLLNQVRLAADR 352 (356)
T ss_dssp --------TTEEEEECCTTCCHHHHHHHHHHHHHTC--
T ss_pred --------CCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 3689999873 789999999999887653
No 109
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=98.70 E-value=1.7e-07 Score=67.70 Aligned_cols=93 Identities=9% Similarity=-0.014 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHHHHH-HhCCCcccCCC-----cceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 10 FYTISEELRPKREILADAL-DKAGMVPVIPD-----GGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l-~~~g~~~~~p~-----gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
++.+++.++++++.+.+.| ++.|+++..|+ ++.++|+.++. ..++.+.|. ++||.+.|
T Consensus 279 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~-~~gi~v~~ 342 (385)
T 2bkw_A 279 LHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYVAD---------------PPDVIAFLK-SHGVVIAG 342 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEECSC---------------HHHHHHHHH-HTTEECBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCceecccCcccccCCceEEEecCC---------------HHHHHHHHH-HCCeEEeC
Confidence 6778899999999999999 87777765432 57788988753 446778764 78999999
Q ss_pred CCCcccCcccCCCCCeEEEE-ee-----CChhHHHHHHHHHHHhhhc
Q psy788 84 PSAFYSDEHKHLGENLIRYC-FF-----KKDETLREASSILQTWRNK 124 (126)
Q Consensus 84 g~~f~~~~~~~~~~~~~Rl~-~~-----~~~e~i~~~~~~l~~~~~~ 124 (126)
|..+.. ..+++|++ ++ .+++++++++++|.+++++
T Consensus 343 g~~~~~------~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 343 GIHKDI------GPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp CCCTTT------GGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred CCCccc------CCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 987532 35799999 76 3788999999999987753
No 110
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=98.69 E-value=1.9e-07 Score=67.83 Aligned_cols=100 Identities=10% Similarity=0.012 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCcccCC--CcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 9 YFYTISEELRPKREILADALDKA-GMVPVIP--DGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p--~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
+++.+++.++++++.+.+.|+++ ++++..| .|+++.| .++.. +..++.+.| .++||.+.||+
T Consensus 298 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~-~~~~~-------------~~~~~~~~l-~~~gi~v~~g~ 362 (406)
T 1kmj_A 298 GLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAF-NLGKH-------------HAYDVGSFL-DNYGIAVRTGH 362 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEE-EETTC-------------CHHHHHHHH-HHTTEECEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEE-EECCC-------------CHHHHHHHH-hhCCcEEEecc
Confidence 56688899999999999999887 7888777 7887776 56531 356777765 68899999998
Q ss_pred CcccCcc-cCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 86 AFYSDEH-KHLGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 86 ~f~~~~~-~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
.|..... ....++++|++++. ++++++..++.|.++++
T Consensus 363 ~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~ 403 (406)
T 1kmj_A 363 HCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHR 403 (406)
T ss_dssp TTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHH
Confidence 7642100 00125899999996 78888999888887664
No 111
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=98.69 E-value=1.6e-07 Score=67.85 Aligned_cols=98 Identities=5% Similarity=-0.027 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcc
Q psy788 9 YFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFY 88 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~ 88 (126)
.++.+++.++++++.+.+.|.++++.+..+..+.+++.-.+.. . +..++.+.|.++.||.+.||. +
T Consensus 275 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~l~~~l~~~~gi~v~~g~--~ 340 (376)
T 3f0h_A 275 GADAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVHPTT---A---------NAYDIFLKLKDEYGIWICPNG--G 340 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEEESS---S---------CHHHHHHHHHHHSSEECEECC--G
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEeCCC---C---------CHHHHHHHHHHhCCEEEecCc--c
Confidence 4778889999999999999987776655444333333222221 1 366888887644599999983 2
Q ss_pred cCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhhcC
Q psy788 89 SDEHKHLGENLIRYCFFK--KDETLREASSILQTWRNKN 125 (126)
Q Consensus 89 ~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~~~ 125 (126)
.. ..+++|++++. +++++++++++|.++++++
T Consensus 341 ~~-----~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~~ 374 (376)
T 3f0h_A 341 EM-----KDTIFRVGHIGALTHEDNTTLVNAFKDLQKRN 374 (376)
T ss_dssp GG-----TTTCEEEECCSSCCHHHHHHHHHHHHHHHHTT
T ss_pred cc-----CCCEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 21 36799999973 8899999999999988765
No 112
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=98.67 E-value=1.7e-07 Score=69.78 Aligned_cols=102 Identities=17% Similarity=0.261 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC-CCCcccCcc----
Q psy788 18 RPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP-PSAFYSDEH---- 92 (126)
Q Consensus 18 ~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p-g~~f~~~~~---- 92 (126)
.++++.+.+.|.+.++++..|.+|+++|+++......+. ....+..+++..|+.++||.+.| |+.|.....
T Consensus 329 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~ 404 (467)
T 1ax4_A 329 IGQVKYLGDRLREAGIPIQYPTGGHAVFVDCKKLVPQIP----GDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGE 404 (467)
T ss_dssp HHHHHHHHHHHHHTTCCBCSSCCSSEEEEESTTTCTTSC----GGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCS
T ss_pred HHHHHHHHHHHHhCCCCcccCCCceEEEEehhhhccccc----cCCCCHHHHHHHHHHhcCceeeecCcccccccccccc
Confidence 366778888887767888789999999999432100000 00013567888875789999999 765321100
Q ss_pred -cCCCCCeEEEEee---CChhHHHHHHHHHHHhhh
Q psy788 93 -KHLGENLIRYCFF---KKDETLREASSILQTWRN 123 (126)
Q Consensus 93 -~~~~~~~~Rl~~~---~~~e~i~~~~~~l~~~~~ 123 (126)
.....+++||+++ .+.+++++++++|.++++
T Consensus 405 ~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~ 439 (467)
T 1ax4_A 405 QKHADMEFMRLTIARRVYTNDHMDYIADALIGLKE 439 (467)
T ss_dssp BCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHH
T ss_pred ccccccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 0012479999998 378899999999987765
No 113
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=98.67 E-value=2.4e-07 Score=66.51 Aligned_cols=94 Identities=11% Similarity=0.071 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-C-ccc-CC--CcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 9 YFYTISEELRPKREILADALDKAG-M-VPV-IP--DGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g-~-~~~-~p--~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
+++++++.++++++.+.+.|++++ + .+. .| .+++++|++++.. . +..++.+.| .++||.+.|
T Consensus 259 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~l-~~~gi~~~~ 325 (360)
T 1w23_A 259 GAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNE---E---------LNQQFLAKA-KEQGFVGLN 325 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSH---H---------HHHHHHHHH-HHTTEESCB
T ss_pred CHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCC---c---------cHHHHHHHH-HHCCeeeec
Confidence 678899999999999999998874 4 432 23 4678999998752 1 355787875 588999998
Q ss_pred CCCcccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhhc
Q psy788 84 PSAFYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWRNK 124 (126)
Q Consensus 84 g~~f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~~ 124 (126)
|..| ++++|++++. ++++++..++.|.+++++
T Consensus 326 ~~~~---------~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 326 GHRS---------VGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp CCTT---------TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCC---------CCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 7643 3689999984 788899999999887754
No 114
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=98.65 E-value=2.9e-07 Score=67.20 Aligned_cols=93 Identities=5% Similarity=-0.050 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC---cceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 9 YFYTISEELRPKREILADALDKA-GMVPVIPD---GGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~---gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
|++++++.++++++.+.+.|+++ ++++..|. ++ ++++.++.. +..++.+.| .++||.+.||
T Consensus 300 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~~~~~L-~~~gi~v~~g 364 (406)
T 3cai_A 300 SMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIP-VVSFAVHKV-------------PADRVVQRL-ADNGILAIAN 364 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCS-EEEEEETTB-------------CHHHHHHHH-HHTTEECEEC
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCC-EEEEEECCc-------------CHHHHHHHH-HHCCcEEecC
Confidence 78899999999999999999887 67766653 56 688888641 366788886 4789999999
Q ss_pred C------CcccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHH
Q psy788 85 S------AFYSDEHKHLGENLIRYCFFK--KDETLREASSILQT 120 (126)
Q Consensus 85 ~------~f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~ 120 (126)
+ .|+.. ...+++|++++. ++++++..++.|.+
T Consensus 365 ~~~~~~~~~g~~----~~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 365 TGSRVLDVLGVN----DVGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp CSCHHHHHHTTT----TTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred ChHHHHHHcCCC----CCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 8 44432 135799999996 78899999988865
No 115
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=98.64 E-value=4e-08 Score=71.62 Aligned_cols=83 Identities=14% Similarity=0.069 Sum_probs=67.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe
Q psy788 7 KCYFYTISEELRPKREILADALDKAG----MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI 82 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g----~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~ 82 (126)
++|++++++.|+++++.+.+.|++++ +.+..|+||+|+|++++ ...+. .++.++||.+.
T Consensus 305 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~----------------~~~~~-~~l~~~gi~v~ 367 (394)
T 2ay1_A 305 MAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGAT----------------PEQVK-RIKEEFGIYMV 367 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCC----------------HHHHH-HHHHHHCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCC----------------HHHHH-HHHHhCCEEec
Confidence 46899999999999999999998764 77788999999998664 22343 44568899987
Q ss_pred CCCCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHh
Q psy788 83 PPSAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTW 121 (126)
Q Consensus 83 pg~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~ 121 (126)
|| +|++++. +++++++++++|.++
T Consensus 368 ~~---------------~Ris~~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 368 GD---------------SRINIAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp TT---------------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred CC---------------CeEEeecCCHhhHHHHHHHHHHc
Confidence 63 4999986 888899999999765
No 116
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=98.64 E-value=2.1e-07 Score=67.35 Aligned_cols=90 Identities=13% Similarity=0.158 Sum_probs=70.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-CCccc---CCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 8 CYFYTISEELRPKREILADALDKA-GMVPV---IPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~---~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
.|++.+++.++++++.+.+.|+++ |+++. .+.|+|+.| +++.. . +..++++.| .++||.+.|
T Consensus 293 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~-~~~~~---~---------~~~~~~~~l-~~~gi~v~~ 358 (390)
T 1elu_A 293 GTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSF-TVDSP---L---------GHRAIVQKL-EEQRIYLRT 358 (390)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEE-EECSS---S---------CHHHHHHHH-HHTTEECEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEE-EcCCC---C---------CHHHHHHHH-HHCCEEEEe
Confidence 368889999999999999999987 77776 346887666 88632 1 366788887 588999999
Q ss_pred CCCcccCcccCCCCCeEEEEee--CChhHHHHHHHHHHHh
Q psy788 84 PSAFYSDEHKHLGENLIRYCFF--KKDETLREASSILQTW 121 (126)
Q Consensus 84 g~~f~~~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~ 121 (126)
|+ . ++++|++++ .+++++++++++|.++
T Consensus 359 ~~----~------~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 359 IA----D------PDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp ET----T------TTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred cC----C------CCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 75 1 478999986 4888999999988653
No 117
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=98.61 E-value=5.9e-07 Score=64.27 Aligned_cols=91 Identities=13% Similarity=0.013 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCcccCC----CcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 10 FYTISEELRPKREILADALDKA-GMVPVIP----DGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p----~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
++.+++.++++++.+.+.|+++ |+++..| .+++++|+.++. +..++.+.|. ++||.+.||
T Consensus 264 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~-~~gi~~~~g 328 (362)
T 3ffr_A 264 ADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM--------------LPGEINKILE-PFDMAVGAG 328 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS--------------CHHHHHHHHG-GGTEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC--------------CHHHHHHHHH-HCCeEEecC
Confidence 6788999999999999999988 7776552 356788888874 1567888875 669999998
Q ss_pred CCcccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhh
Q psy788 85 SAFYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWR 122 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~ 122 (126)
..+. ..+++|++++. ++++++..++.|.+++
T Consensus 329 ~~~~-------~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 329 YGSK-------KETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp SGGG-------TTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred cccc-------CCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 5442 36899999985 7788899888887754
No 118
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=98.59 E-value=9e-07 Score=63.90 Aligned_cols=91 Identities=14% Similarity=0.061 Sum_probs=70.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
..++..+++.++++++.+.+.|+++++++..|..+.++|+..+. ..++.+.|. ++||.+.||+.
T Consensus 304 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~-~~gi~v~~~~~ 367 (397)
T 3f9t_A 304 REGQRKIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIEDED---------------YKEVCKKLR-DRGIYVSVCNC 367 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEECTT---------------HHHHHHHHH-HTTCBCEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEcCCCccEEEEEeCC---------------HHHHHHHHH-hCCeEEeccCC
Confidence 35677888899999999999999888775444455567776652 456778865 67999998642
Q ss_pred cccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 87 FYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
++++|++++. +++++++++++|.++++
T Consensus 368 ----------~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 368 ----------VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp ----------SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred ----------CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 4799999994 88999999999988764
No 119
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=98.57 E-value=2.1e-07 Score=66.61 Aligned_cols=91 Identities=12% Similarity=0.164 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhC-CeeEeCCCC
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNV-KLQGIPPSA 86 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-gV~v~pg~~ 86 (126)
..++++++.++++++.+.+.|+..++++..|.|++|+|++++ .++++.|. ++ ||.+
T Consensus 264 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~l~-~~~gi~v----- 320 (359)
T 1svv_A 264 NLFFELGAHSNKMAAILKAGLEACGIRLAWPSASNQLFPILE-----------------NTMIAELN-NDFDMYT----- 320 (359)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEECBEEE-----------------HHHHHHHT-TTEECEE-----
T ss_pred hhHHHHHHHHHHHHHHHHHHhccCCeEEccCCccceEEEEcC-----------------HHHHHHHH-HhcCEEE-----
Confidence 356789999999999999999433788888899999998664 15667765 55 9998
Q ss_pred cccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhhc
Q psy788 87 FYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWRNK 124 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~~ 124 (126)
|+... ..++++|++++. +++++++++++|.++++.
T Consensus 321 ~~~~~---~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 321 VEPLK---DGTCIMRLCTSWATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp EEEET---TTEEEEEEECCTTCCHHHHHHHHHHHHHC---
T ss_pred Eeccc---CCCceEEEEccCcCCHHHHHHHHHHHHHHHhc
Confidence 33211 146799998763 889999999999987753
No 120
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=98.56 E-value=1.2e-07 Score=70.68 Aligned_cols=106 Identities=14% Similarity=0.125 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcccCcc
Q psy788 13 ISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYSDEH 92 (126)
Q Consensus 13 ~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~ 92 (126)
..+.+.++++.+.+.|.+.++++. |.+|+++|++++......+ .... +...++..|+.++||.+.|++.|+....
T Consensus 326 ~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~-~~~~l~~~L~~~~gv~~~~~~~~~~~~~ 400 (467)
T 2oqx_A 326 WLAYRIAQVQYLVDGLEEIGVVCQ-QAGGHAAFVDAGKLLPHIP---ADQF-PAQALACELYKVAGIRAVEIGSFLLGRD 400 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEE-EECSSCEEEEHHHHSTTSC---GGGC-HHHHHHHHHHHHHCEECEEESHHHHCBC
T ss_pred HHHHHHHHHHHHHHHHHHCCCeee-cCCceEEEEechhhcccCC---cccc-cHHHHHHHHHHhcCceeccccccccccc
Confidence 344566788899999988788877 8899999999853000011 0000 1345678875788999999665422100
Q ss_pred c------CCCCCeEEEEee---CChhHHHHHHHHHHHhhh
Q psy788 93 K------HLGENLIRYCFF---KKDETLREASSILQTWRN 123 (126)
Q Consensus 93 ~------~~~~~~~Rl~~~---~~~e~i~~~~~~l~~~~~ 123 (126)
+ ....+++|++++ .+++++++++++|.++++
T Consensus 401 ~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~ 440 (467)
T 2oqx_A 401 PKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKE 440 (467)
T ss_dssp TTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHH
T ss_pred ccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHh
Confidence 0 012479999998 578899999999998775
No 121
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=98.55 E-value=7.6e-07 Score=65.02 Aligned_cols=100 Identities=11% Similarity=-0.009 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC------cceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeE
Q psy788 9 YFYTISEELRPKREILADALDKA-GMVPVIPD------GGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQG 81 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~------gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v 81 (126)
+++++++.++++++.+.+.|+++ |+++..|. |+++.| .++.. +..++.+.| .++||.+
T Consensus 302 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~-------------~~~~~~~~l-~~~gi~v 366 (420)
T 1t3i_A 302 GMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASF-NVAGL-------------HASDVATMV-DQDGIAI 366 (420)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEE-EETTB-------------CHHHHHHHH-HTTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEE-EECCC-------------CHHHHHHHH-HHCCeEE
Confidence 46788999999999999999987 78876664 676655 57631 255777765 6889999
Q ss_pred eCCCCcccCcccCCC-CCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 82 IPPSAFYSDEHKHLG-ENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 82 ~pg~~f~~~~~~~~~-~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
.||..|........+ ++++|++++. ++++++..++.|.++++
T Consensus 367 ~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~ 411 (420)
T 1t3i_A 367 RSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIR 411 (420)
T ss_dssp BCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred eeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 999766431000012 6799999995 78889998888887765
No 122
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=98.53 E-value=8.5e-07 Score=63.92 Aligned_cols=94 Identities=12% Similarity=0.165 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-C-cccC---CCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 9 YFYTISEELRPKREILADALDKAG-M-VPVI---PDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g-~-~~~~---p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
+++.+++.++++++.+.+.|++++ + ++.. +.++.++|+.++.. . ++.++++.| .++||.+.|
T Consensus 260 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~L-~~~gi~~~~ 326 (362)
T 2c0r_A 260 GLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASE---E---------LEKEFVKAS-EQEGFVGLK 326 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCH---H---------HHHHHHHHH-HHTTEESCB
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCCc---c---------hHHHHHHHH-HHCCCeecc
Confidence 688999999999999999999886 6 6532 23456788888742 1 366788885 588999988
Q ss_pred CCCcccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhhc
Q psy788 84 PSAFYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWRNK 124 (126)
Q Consensus 84 g~~f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~~ 124 (126)
|..| .+++|+|++. +.++++..++.|.+++++
T Consensus 327 g~~~---------~~~iRis~~~~~~~e~i~~l~~~l~~~~~~ 360 (362)
T 2c0r_A 327 GHRS---------VGGLRASIYNAVPYESCEALVQFMEHFKRS 360 (362)
T ss_dssp CCTT---------TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCC---------CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 8655 2469999985 788899999999887764
No 123
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=98.50 E-value=5.2e-07 Score=67.06 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=62.5
Q ss_pred HHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC-CCCcccCc-----cc
Q psy788 20 KREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP-PSAFYSDE-----HK 93 (126)
Q Consensus 20 r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p-g~~f~~~~-----~~ 93 (126)
..+.+.+.|.+.|+++..|.+|+|+|+++.......+ ..+. ....++..|+.++||.+.| |+.|.... ..
T Consensus 321 ~~~~l~~~L~~~g~~~~~p~~~~~~~~~~~~~~~~~~---~~~~-~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~ 396 (456)
T 2ez2_A 321 QVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLT---QDEF-PAQSLAASIYVETGVRSMERGIISAGRNNVTGEHH 396 (456)
T ss_dssp HHHHHHHHHHHTTCCBCSSCCSSEEEEEHHHHTTTSC---GGGC-HHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBC
T ss_pred HHHHHHHHHhcCCCccccCCCceEEEEEhHHhcCCCC---hhhc-cHHHHHHHHHHhcCeeeecccccccccCccccccc
Confidence 3345666666657888789999999999842100011 0000 0223467765688999877 55442110 00
Q ss_pred CCCCCeEEEEee---CChhHHHHHHHHHHHhhh
Q psy788 94 HLGENLIRYCFF---KKDETLREASSILQTWRN 123 (126)
Q Consensus 94 ~~~~~~~Rl~~~---~~~e~i~~~~~~l~~~~~ 123 (126)
..+.+++|++++ .+++++++++++|.++++
T Consensus 397 ~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~ 429 (456)
T 2ez2_A 397 RPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQ 429 (456)
T ss_dssp CCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 012478999999 478999999999988775
No 124
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=98.49 E-value=1.2e-06 Score=64.03 Aligned_cols=104 Identities=13% Similarity=0.089 Sum_probs=72.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-CcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVIP-DGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p-~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
.+++.+++.++++++.+.+.|.+.|+++..| .+++++|+.++... . +...+.+. +.++||.+.++..
T Consensus 286 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~-l~~~gi~v~~~~~ 353 (425)
T 3ecd_A 286 DDFKTYIDRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKG--L---------KGAQVEQA-LERAGITCNKNGI 353 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGT--C---------CHHHHHHH-HHHTTEECEECCC
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCceEEEEEeCCCC--C---------CHHHHHHH-HHHcCCEeccccc
Confidence 5678899999999999999998888877654 57889999986422 1 24456665 4688999995443
Q ss_pred cccCcccCCCCCeEEEEeeC------ChhHHHHHHHHHHHhhhc
Q psy788 87 FYSDEHKHLGENLIRYCFFK------KDETLREASSILQTWRNK 124 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~------~~e~i~~~~~~l~~~~~~ 124 (126)
++.... ....+++|+++.. .++.+++.++.|.+++++
T Consensus 354 p~~~~~-~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~ 396 (425)
T 3ecd_A 354 PFDPEK-PTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEA 396 (425)
T ss_dssp TTCSSC-TTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCC-CCCccceeccchhheeccCCHHHHHHHHHHHHHHHhc
Confidence 321100 0135789998653 267888888888777653
No 125
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=98.49 E-value=1.2e-06 Score=66.23 Aligned_cols=98 Identities=11% Similarity=0.082 Sum_probs=74.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-cceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe----
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVIPD-GGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI---- 82 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~-gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~---- 82 (126)
.+++.+++++.++++.+.+.|.+.|+++..|. +++++|++++..+ + +..++.+.| .+.||.+.
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g--~---------~~~~~~~~L-~~~gI~v~~~~~ 388 (483)
T 1rv3_A 321 PEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKG--T---------DGGRAEKVL-EACSIACNKNTC 388 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEGGGGT--C---------CHHHHHHHH-HHTTEECEEECC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCEeccCCCCCceEEEeccCCC--C---------CHHHHHHHH-HhCCcEEecCCC
Confidence 46788999999999999999988888876653 4578999986422 1 355666664 68999999
Q ss_pred CCCCcccCcccCCCCCeEEEEeeC--C----hhHHHHHHHHHHHhhh
Q psy788 83 PPSAFYSDEHKHLGENLIRYCFFK--K----DETLREASSILQTWRN 123 (126)
Q Consensus 83 pg~~f~~~~~~~~~~~~~Rl~~~~--~----~e~i~~~~~~l~~~~~ 123 (126)
||+... .+++++||+++. + ++++++.++.|.++++
T Consensus 389 pg~~~~------~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~ 429 (483)
T 1rv3_A 389 PGDKSA------LRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIE 429 (483)
T ss_dssp SSCSCT------TSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCcC------CCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHH
Confidence 887321 135799999985 4 7889999998887765
No 126
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=98.49 E-value=1.6e-07 Score=68.33 Aligned_cols=102 Identities=11% Similarity=0.039 Sum_probs=60.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCc---ceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe
Q psy788 7 KCYFYTISEELRPKREILADALDKA-GMVPVIPDG---GYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI 82 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~g---g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~ 82 (126)
.++++++++.++++++.+.+.|+ . ++.+..|++ +.++++.++.. +..++++.| . .||.+.
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~~L-~-~gi~v~ 342 (400)
T 3vax_A 279 EAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFEDV-------------DAEAFLVTL-K-DLVAVA 342 (400)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECTTC-------------CHHHHHHHH-H-HHHHHT
T ss_pred HhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeCCC-------------CHHHHHHHH-h-cCcEEE
Confidence 34678999999999999999998 6 788776665 34666666631 366788886 4 899999
Q ss_pred CCCCcccCcc------------cCCCCCeEEEEe-eC--ChhHHHHHHHHHHHhhhc
Q psy788 83 PPSAFYSDEH------------KHLGENLIRYCF-FK--KDETLREASSILQTWRNK 124 (126)
Q Consensus 83 pg~~f~~~~~------------~~~~~~~~Rl~~-~~--~~e~i~~~~~~l~~~~~~ 124 (126)
||+.|..... ....++++||++ +. ++++++..++.|.+++++
T Consensus 343 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 343 TGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp TTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred ecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 9987754200 000148999999 73 678899999999887653
No 127
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=98.48 E-value=2.1e-06 Score=62.77 Aligned_cols=104 Identities=10% Similarity=0.023 Sum_probs=72.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-CcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIP-DGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p-~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
+.+++.+++.+.++++.+.+.|.+.|+.+..+ .++.++|+.++... . +...+.+. +.++||.+.|+.
T Consensus 284 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~-l~~~gi~v~~~~ 351 (420)
T 3gbx_A 284 EPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGTENHLFLLDLVDKN--L---------TGKEADAA-LGRANITVNKNS 351 (420)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGT--C---------CHHHHHHH-HHHTTEECEEEC
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHhcCCeeccCCCCCeEEEEEcCCCC--C---------CHHHHHHH-HHHCCcEecccc
Confidence 35778899999999999999998878777543 67889999886422 1 24456565 468899999943
Q ss_pred CcccCcccCCCCCeEEEEeeC------ChhHHHHHHHHHHHhhh
Q psy788 86 AFYSDEHKHLGENLIRYCFFK------KDETLREASSILQTWRN 123 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~~------~~e~i~~~~~~l~~~~~ 123 (126)
.++.... ..++..+|++++. .++.++..++.|.++++
T Consensus 352 ~~~~~~~-~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~ 394 (420)
T 3gbx_A 352 VPNDPKS-PFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLD 394 (420)
T ss_dssp CTTCSSC-TTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCccc-cCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHh
Confidence 3322100 0124569999873 35778888888877765
No 128
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=98.45 E-value=1.9e-06 Score=64.84 Aligned_cols=98 Identities=12% Similarity=0.024 Sum_probs=72.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceE-EEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAGMVPVIPDGGYF-MVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
.++++++++.+.++++++.+.|.+.|+++..+.+.++ +|++++.. . +..++++.|. +.||.+ |+.
T Consensus 339 ~~~l~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~---~---------~~~~l~~~L~-~~Gi~~-~~~ 404 (474)
T 1wyu_B 339 LEGLKKAAALAVLNARYLKELLKEKGYRVPYDGPSMHEFVAQPPEG---F---------RALDLAKGLL-ELGFHP-PTV 404 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSCSSCCSCEEEBCSTT---C---------CHHHHHHHHH-HTTCCC-CEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCcEecCCCCcceEEEEEcCCC---C---------CHHHHHHHHH-HCCccc-ccc
Confidence 4577888999999999999999887777633333332 67777321 1 3668888876 669984 776
Q ss_pred CcccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 86 AFYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
.|... ..+++|++++. +.+++++++++|.++++
T Consensus 405 ~~~~~-----~~~~lRis~~~~~t~e~id~~~~~L~~~~~ 439 (474)
T 1wyu_B 405 YFPLI-----VKEALMVEPTETEAKETLEAFAEAMGALLK 439 (474)
T ss_dssp SCSTT-----STTCEEECCCTTSCHHHHHHHHHHHHHHHT
T ss_pred ccccc-----cCCEEEEEeecCCCHHHHHHHHHHHHHHHH
Confidence 66421 35789999996 78999999999988765
No 129
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=98.42 E-value=1.7e-06 Score=63.93 Aligned_cols=108 Identities=9% Similarity=-0.131 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 8 CYFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
.+++++++..+..++.+.+.+.++ ++....|.|. |+|+++..... ..+ ........++++.|+ ++||.+.|+..
T Consensus 317 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~--~~~-~~~~~~~~~~~~~l~-~~Gv~v~~~~~ 391 (430)
T 3i4j_A 317 DLTGAAKERGAQLLAGLQALQARFPQMMQVRGTGL-LLGVVLGDLAT--GQA-FETPGIASRIGAAAL-KRGLITYPGSG 391 (430)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETT-EEEEEEC---------------CHHHHHHHHH-HTTEECC----
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEE-EEEEEeccccc--cCC-CccHHHHHHHHHHHH-hCCCEEEeccc
Confidence 455556665555556665555454 3444555554 77777753100 000 000001356888865 88999999854
Q ss_pred cccCcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhhc
Q psy788 87 FYSDEHKHLGENLIRYCFF--KKDETLREASSILQTWRNK 124 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~~ 124 (126)
+... .+.+++|++++ .+++++++++++|.++++.
T Consensus 392 ~~~~----~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 427 (430)
T 3i4j_A 392 AEPN----GRGDHLLLGPPLSITAAEVDGLLALLAGALED 427 (430)
T ss_dssp -----------CEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccCC----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 4332 24679999988 4889999999999988764
No 130
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=98.32 E-value=4.8e-06 Score=61.00 Aligned_cols=101 Identities=16% Similarity=0.094 Sum_probs=70.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCc---ceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe
Q psy788 7 KCYFYTISEELRPKREILADALDKA-GMVPVIPDG---GYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI 82 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~g---g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~ 82 (126)
..+++++++.++++++.+.+.|+++ ++.+..+.+ +.++++.++.. +..++.+.|. + |.+.
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~~l~-~--i~v~ 342 (423)
T 3lvm_A 279 KEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYV-------------EGESLIMALK-D--LAVS 342 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETTS-------------CHHHHHHHTT-T--EECB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeCCC-------------CHHHHHHHHh-h--heec
Confidence 3457889999999999999999887 777766654 33555555431 3667777753 4 9999
Q ss_pred CCCCcccCccc------------CCCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 83 PPSAFYSDEHK------------HLGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 83 pg~~f~~~~~~------------~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
||..|...... ....+++|++++. ++++++..++.|.++++
T Consensus 343 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~ 397 (423)
T 3lvm_A 343 SGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIG 397 (423)
T ss_dssp CCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred cCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 99877542100 0014899999994 77889999999988765
No 131
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=98.30 E-value=2.8e-06 Score=62.35 Aligned_cols=96 Identities=13% Similarity=0.066 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHHhC----C-CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 13 ISEELRPKREILADALDKA----G-MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 13 ~r~~~~~r~~~l~~~l~~~----g-~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
+.+.++++++.+.+.|++. . +....|. |+|+|++++.... ...+ +..+..+++..|. ++||.+.||+.|
T Consensus 320 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~-~~~~---~~~~~~~l~~~l~-~~gi~v~~~~~~ 393 (426)
T 1sff_A 320 LLQKANDLGQKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGD-HNKP---DAKLTAEIVARAR-DKGLILLSCGPY 393 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEE-TTEEEEEEBGGGC-TTSB---CHHHHHHHHHHHH-HTTEECEEESTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCcc-ccCC---ChHHHHHHHHHHH-HCCcEEecCCCC
Confidence 4455566666666666543 2 2223455 6799999953100 0000 0013567888875 779999998753
Q ss_pred ccCcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhh
Q psy788 88 YSDEHKHLGENLIRYCFF--KKDETLREASSILQTWRN 123 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~ 123 (126)
++++|++++ .+++++++++++|.++++
T Consensus 394 ---------~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 422 (426)
T 1sff_A 394 ---------YNVLRILVPLTIEDAQIRQGLEIISQCFD 422 (426)
T ss_dssp ---------SCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ---------CCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 368999986 388999999999988765
No 132
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=98.28 E-value=3e-06 Score=60.51 Aligned_cols=89 Identities=17% Similarity=0.173 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcc-cCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcccC
Q psy788 12 TISEELRPKREILADALDKAGMVP-VIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYSD 90 (126)
Q Consensus 12 ~~r~~~~~r~~~l~~~l~~~g~~~-~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~ 90 (126)
.+++.+ ++++.+.+.|+++|+.+ ..|.+|.|+|++++... . +..++++.|. ++||.+.|+ +
T Consensus 254 ~~~~~~-~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~l~-~~gi~v~~~---~-- 315 (347)
T 1jg8_A 254 RLKEDH-ENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLK--V---------NAHGFIEALR-NSGVLANAV---S-- 315 (347)
T ss_dssp THHHHH-HHHHHHHHHHHHHTCBCCGGGCCSSEEEEECTTSS--S---------CHHHHHHHHH-HHTEECEEE---E--
T ss_pred HHHHHH-HHHHHHHHHHHhcCceeccCCCcceEEEEEccccc--C---------CHHHHHHHHH-HCCCEEecC---C--
Confidence 344444 46688888887766654 23444557999987411 1 3668888875 789999874 1
Q ss_pred cccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhhc
Q psy788 91 EHKHLGENLIRYCFFK--KDETLREASSILQTWRNK 124 (126)
Q Consensus 91 ~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~~ 124 (126)
.+++|++++. +++++++++++|.+++++
T Consensus 316 ------~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 316 ------DTEIRLVTHKDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp ------TTEEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ------CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 3589999964 889999999999987653
No 133
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=98.24 E-value=4.8e-06 Score=60.09 Aligned_cols=84 Identities=14% Similarity=0.122 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcccCc
Q psy788 12 TISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYSDE 91 (126)
Q Consensus 12 ~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~ 91 (126)
.+++.++++++.+.+.|++++.... +.+|+|+|++++. +..++++.|. ++||.+.|+
T Consensus 290 ~~~~~~~~~~~~l~~~L~~~~~~~~-~~~g~~~~~~~~~--------------~~~~~~~~l~-~~gi~~~~~------- 346 (375)
T 2eh6_A 290 KLLPHVREVGNYFKEKLKELGKGKV-KGRGLMLGLELER--------------ECKDYVLKAL-EKGLLINCT------- 346 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSEE-EEETTEEEEECSS--------------CCHHHHHHHH-HTTEECEEE-------
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEEEEEEEcC--------------cHHHHHHHHH-HCCCEEecC-------
Confidence 6778888999999999988754333 4467789998864 2456778865 789999885
Q ss_pred ccCCCCCeEEEEee--CChhHHHHHHHHHHHhh
Q psy788 92 HKHLGENLIRYCFF--KKDETLREASSILQTWR 122 (126)
Q Consensus 92 ~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~ 122 (126)
+++++|++++ .+++++++++++|.+++
T Consensus 347 ----~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 347 ----AGKVLRFLPPLIIQKEHIDRAISVLREIL 375 (375)
T ss_dssp ----TTTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred ----CCCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 1468999987 38899999999998753
No 134
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=98.23 E-value=9.3e-06 Score=60.40 Aligned_cols=106 Identities=8% Similarity=-0.076 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 9 YFYTISEELRPKREILADALDKAG-MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g-~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
+++++++..+..++.+.+.+.+++ +....+.|. |+++++........ + .......+++..|+ +.||.+.|+..|
T Consensus 343 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~-~~~i~~~~~~~~~~-~--~~~~~~~~~~~~l~-~~Gv~~~~~~~~ 417 (452)
T 3n5m_A 343 LIERSAQMGSLLLEQLKEEIGEHPLVGDIRGKGL-LVGIELVNDKETKE-P--IDNDKIASVVNACK-EKGLIIGRNGMT 417 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSS-CEEEEEEEETTTTE-E--CCHHHHHHHHHHHH-HTTEECEECTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEE-EEEEEEecCCcccC-C--CCHHHHHHHHHHHH-HCCcEEeecCcc
Confidence 444444444444444444444443 333445544 66777743110000 0 00001246777765 789999999887
Q ss_pred ccCcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhhc
Q psy788 88 YSDEHKHLGENLIRYCFF--KKDETLREASSILQTWRNK 124 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~~ 124 (126)
... .++++||+.+ .+++++++++++|.+++++
T Consensus 418 ~~~-----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 418 TAG-----YNNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp STT-----CCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred cCC-----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 532 4689999754 5899999999999988763
No 135
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=98.22 E-value=4.8e-06 Score=61.45 Aligned_cols=99 Identities=11% Similarity=-0.026 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHHHhC----C-CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 13 ISEELRPKREILADALDKA----G-MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 13 ~r~~~~~r~~~l~~~l~~~----g-~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
+.+.++++++.+.+.|++. + +....+. |.|+|++++.... ...+ +..+..+++..|+ ++||.+.||..|
T Consensus 326 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~-g~~~~i~~~~~~~-~~~~---~~~~~~~~~~~l~-~~Gv~v~~~~~~ 399 (433)
T 1zod_A 326 LVARANVMGDRLRRGLLDLMERFDCIGDVRGR-GLLLGVEIVKDRR-TKEP---ADGLGAKITRECM-NLGLSMNIVQLP 399 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEEEEETT-TTEE---CTTHHHHHHHHHH-HTTEECCEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCcc-ccCC---ChHHHHHHHHHHH-HCCCeEeccCCC
Confidence 4566666777777777653 2 2223344 5677898864100 0000 0012567888875 889999999876
Q ss_pred ccCcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhhc
Q psy788 88 YSDEHKHLGENLIRYCFF--KKDETLREASSILQTWRNK 124 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~~ 124 (126)
+ .++++|++++ .+++++++++++|.+++++
T Consensus 400 ~-------~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~ 431 (433)
T 1zod_A 400 G-------MGGVFRIAPPLTVSEDEIDLGLSLLGQAIER 431 (433)
T ss_dssp T-------SCCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred C-------CCCEEEEECCcCCCHHHHHHHHHHHHHHHHH
Confidence 4 2579999765 4899999999999987753
No 136
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=98.22 E-value=5.7e-06 Score=60.23 Aligned_cols=87 Identities=10% Similarity=0.125 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcc--cCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCccc
Q psy788 12 TISEELRPKREILADALDKAGMVP--VIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYS 89 (126)
Q Consensus 12 ~~r~~~~~r~~~l~~~l~~~g~~~--~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~ 89 (126)
.+++.++++++.+.+.|++.+.++ ..+..|.|+|++++. +..++++.|..++||.+.|+
T Consensus 305 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~--------------~~~~l~~~l~~~~gi~v~~~----- 365 (395)
T 1vef_A 305 RLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKE--------------KAAPYIARLEKEHRVLALQA----- 365 (395)
T ss_dssp TTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESS--------------CSHHHHHHHHHHHCEECEES-----
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcC--------------hHHHHHHHHHHHCCeEEecC-----
Confidence 357788888899999998764332 234567799998874 14567888653789999985
Q ss_pred CcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhh
Q psy788 90 DEHKHLGENLIRYCFF--KKDETLREASSILQTWRN 123 (126)
Q Consensus 90 ~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~ 123 (126)
+++++|++++ .+++++++++++|.++++
T Consensus 366 ------~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 395 (395)
T 1vef_A 366 ------GPTVIRFLPPLVIEKEDLERVVEAVRAVLA 395 (395)
T ss_dssp ------STTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred ------CCCEEEEeCCCCCCHHHHHHHHHHHHHHhC
Confidence 1478999886 388999999999988753
No 137
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=98.21 E-value=7.2e-07 Score=64.21 Aligned_cols=93 Identities=13% Similarity=0.067 Sum_probs=69.4
Q ss_pred HHHHHH--HHHHHHHHHHHHhCCCcccCCC--cceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 12 TISEEL--RPKREILADALDKAGMVPVIPD--GGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 12 ~~r~~~--~~r~~~l~~~l~~~g~~~~~p~--gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
.+++.+ +++++.+.+.|.+.++++..|. .|.++|++++ . ..++.+.|. +.||.+.| ..|
T Consensus 267 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~l~-~~gi~~~~-~~~ 329 (371)
T 2e7j_A 267 RIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAE-V--------------LYEISKKAK-GGRFFLYR-ELK 329 (371)
T ss_dssp HGGGHHHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECH-H--------------HHHHHHHSS-SGGGHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcEEecCCCccCceEEEECC-C--------------HHHHHHHHH-HCCEEEEe-ccc
Confidence 456677 8888999999987787776663 3558899876 1 456778765 88999999 555
Q ss_pred ccC--cccCCCCCeEE-EEee---CChhHHHHHHHHHHHhhhc
Q psy788 88 YSD--EHKHLGENLIR-YCFF---KKDETLREASSILQTWRNK 124 (126)
Q Consensus 88 ~~~--~~~~~~~~~~R-l~~~---~~~e~i~~~~~~l~~~~~~ 124 (126)
... + ..++++| ++++ .++++++.++++|.+++++
T Consensus 330 ~~~~~g---~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 330 SRKIHG---IKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEK 369 (371)
T ss_dssp HTTEEC---SCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccccC---CCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHh
Confidence 330 1 1267999 9999 5789999999999988764
No 138
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=98.21 E-value=3.2e-06 Score=61.71 Aligned_cols=76 Identities=11% Similarity=-0.038 Sum_probs=45.6
Q ss_pred CCcc-cCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcccCcccCCCCCeEEEEeeC-Chh
Q psy788 32 GMVP-VIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFK-KDE 109 (126)
Q Consensus 32 g~~~-~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~Rl~~~~-~~e 109 (126)
|+.+ ..|.|++|.|.+++... .. .++.+++..++.++||.+.||..|.. +++++||+++. +.+
T Consensus 289 g~~~~~~~~g~~~~~~~~~~~~-~~--------~~~~~~~~~ll~~~gV~v~~g~~~~~------~~~~lRi~~~~~~~~ 353 (374)
T 2aeu_A 289 NIVYERTPTGFVIKRVYKDDTI-NI--------KKLIEIGFNLLKNYGIITITVAGMPG------ASKSLRIDLTSRDAE 353 (374)
T ss_dssp EEEEEECSSEEEEEEEESSHHH-HH--------HHHHHHHHHHHHHHCEECSTTSSSCS------SCCSEEEETTSGGGG
T ss_pred CcceeeCCceEEEEeecccccc-cc--------cchHHHHHHHHHhCCEEEecCCCCCC------CCCeEEEEcCCchHH
Confidence 3454 45777777776554210 00 02345777777788999999988732 35789999986 322
Q ss_pred H--HHHHHHHHHHhh
Q psy788 110 T--LREASSILQTWR 122 (126)
Q Consensus 110 ~--i~~~~~~l~~~~ 122 (126)
. ++..++.|.+++
T Consensus 354 ~~~l~~l~~~l~~~l 368 (374)
T 2aeu_A 354 RIDDNYIIKAIVESI 368 (374)
T ss_dssp GSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 2 444444444443
No 139
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=98.21 E-value=1.5e-05 Score=59.21 Aligned_cols=93 Identities=15% Similarity=0.144 Sum_probs=69.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeE--eCC
Q psy788 8 CYFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQG--IPP 84 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v--~pg 84 (126)
..++++++.+.++++++.+.|.++ |+++..|. .+|.++.++.. . +..++++.|. ++||.+ .|+
T Consensus 340 ~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~~---~---------~~~~~~~~L~-~~gi~v~~~~~ 405 (438)
T 1wyu_A 340 EGLREVALKSVEMAHKLHALLLEVPGVRPFTPK-PFFNEFALALP---K---------DPEAVRRALA-ERGFHGATPVP 405 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS-SBCSEEEEECS---S---------CHHHHHHHHH-HTTCCCCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC-CeEEEEEEeCC---C---------CHHHHHHHHH-HCCceeccccc
Confidence 346778889999999999999988 88876654 45544444321 1 3668888876 679998 677
Q ss_pred CCcccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhh
Q psy788 85 SAFYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWR 122 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~ 122 (126)
..|. ++++|++++. +.++++..++.|.+++
T Consensus 406 ~~~~--------~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 406 REYG--------ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp TTSC--------SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred cccC--------CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 6553 4789999993 7888999999988764
No 140
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=98.20 E-value=1.7e-05 Score=57.93 Aligned_cols=89 Identities=10% Similarity=0.178 Sum_probs=68.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCC----cceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCe
Q psy788 8 CYFYTISEELRPKREILADALDKA----GMVPVIPD----GGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKL 79 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~----g~~~~~p~----gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV 79 (126)
.+++++++.++++++.+.+.|.+. |+++..|. .+.++|++++. ..++.+.|. ++||
T Consensus 301 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~~~l~-~~gi 364 (416)
T 1qz9_A 301 TDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE---------------GYAVIQALI-DRGV 364 (416)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT---------------HHHHHHHHH-TTTE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC---------------HHHHHHHHH-hCCc
Confidence 467889999999999999999886 77776664 25578888752 446778765 7799
Q ss_pred eEeCCCCcccCcccCCCCCeEEEEeeC---ChhHHHHHHHHHHHhhh
Q psy788 80 QGIPPSAFYSDEHKHLGENLIRYCFFK---KDETLREASSILQTWRN 123 (126)
Q Consensus 80 ~v~pg~~f~~~~~~~~~~~~~Rl~~~~---~~e~i~~~~~~l~~~~~ 123 (126)
.+.+ . ..+++|++++. ++++++.++++|.++++
T Consensus 365 ~~~~----~-------~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~ 400 (416)
T 1qz9_A 365 IGDY----R-------EPRIMRFGFTPLYTTFTEVWDAVQILGEILD 400 (416)
T ss_dssp ECEE----E-------TTTEEEEECCTTTCCHHHHHHHHHHHHHHHH
T ss_pred Eecc----C-------CCCeEEEeCcccCCCHHHHHHHHHHHHHHHh
Confidence 8632 1 35799999972 88999999999988775
No 141
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=98.16 E-value=1.9e-05 Score=57.53 Aligned_cols=93 Identities=13% Similarity=0.022 Sum_probs=63.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAG-MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g-~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
+.+++++++..+..++.+.+.+.+++ +.... ..|.|+|++++... +..++++.|. +.||.+.|+.
T Consensus 299 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~~~------------~~~~~~~~l~-~~Gi~v~~~~ 364 (395)
T 3nx3_A 299 EKILENVNKLTPYLEQSLDELINEFDFCKKRK-GLGFMQGLSLDKSV------------KVAKVIQKCQ-ENALLLISCG 364 (395)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE-EETTEEEEEECTTS------------CHHHHHHHHH-HTTEECEEET
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE-eEEEEEEEEeCCcc------------hHHHHHHHHH-HCCCEEecCC
Confidence 34555666555555565655555443 22233 34668899887521 3567888864 7899998852
Q ss_pred CcccCcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhhc
Q psy788 86 AFYSDEHKHLGENLIRYCFF--KKDETLREASSILQTWRNK 124 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~~ 124 (126)
++++|++++ .+++++++++++|.+++++
T Consensus 365 -----------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 365 -----------ENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp -----------TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred -----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 478999865 4889999999999988764
No 142
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=98.15 E-value=6.3e-06 Score=60.10 Aligned_cols=88 Identities=17% Similarity=0.119 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHHHhC--CCcc--cCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 12 TISEELRPKREILADALDKA--GMVP--VIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 12 ~~r~~~~~r~~~l~~~l~~~--g~~~--~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
++++.++++++.+.+.|++. ++++ ..+..|.|+|++++... +..++++.|. ++||.+.||.
T Consensus 302 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------~~~~l~~~l~-~~gi~v~~~~-- 366 (397)
T 2ord_A 302 GFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREEV------------SNREVATKCF-ENKLLVVPAG-- 366 (397)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTS------------CHHHHHHHHH-HTTEECEEET--
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEECChH------------HHHHHHHHHH-HCCCEEccCC--
Confidence 57888999999999999775 3443 12334568888887421 3667888875 6899999861
Q ss_pred ccCcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhh
Q psy788 88 YSDEHKHLGENLIRYCFF--KKDETLREASSILQTWRN 123 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~ 123 (126)
++++|++++ .+++++++++++|.++++
T Consensus 367 ---------~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 367 ---------NNTIRFLPPLTVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp ---------TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ---------CCEEEEECCcCCCHHHHHHHHHHHHHHHh
Confidence 368999965 488999999999998775
No 143
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=98.15 E-value=1.1e-05 Score=59.60 Aligned_cols=100 Identities=14% Similarity=0.059 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCccc
Q psy788 10 FYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYS 89 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~ 89 (126)
++++++..+..++.+.+.+.+++.....+..|.|+|+++...... . ..+..+..++++.|+ ++||.+.|+..
T Consensus 322 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~---~~~~~~~~~~~~~l~-~~Gv~v~~~~~--- 393 (439)
T 3dxv_A 322 PAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELVCDRQS-R---EPARAETAKLIYRAY-QLGLVVYYVGM--- 393 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTT-T---EECHHHHHHHHHHHH-HHTEECEEEST---
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccc-c---CCCHHHHHHHHHHHH-HCCcEEeecCC---
Confidence 334444333334444443333332222334456788877321000 0 000013557888875 67999999742
Q ss_pred CcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhh
Q psy788 90 DEHKHLGENLIRYCFF--KKDETLREASSILQTWRN 123 (126)
Q Consensus 90 ~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~ 123 (126)
..+++|++++ .+++++++++++|.++++
T Consensus 394 ------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 423 (439)
T 3dxv_A 394 ------NGNVLEFTPPLTITETDIHKALDLLDRAFS 423 (439)
T ss_dssp ------TSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ------CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 2478999765 488999999999998875
No 144
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=98.13 E-value=1.7e-05 Score=59.24 Aligned_cols=101 Identities=9% Similarity=0.055 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcc
Q psy788 9 YFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFY 88 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~ 88 (126)
+++++++..+..++.+.+.+.+++.....+..|.|+|+++..... ..+ +.....++++.|+ ++||.+.|+..|
T Consensus 348 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~~~~~~~--~~~---~~~~~~~~~~~l~-~~Gv~v~~~~~~- 420 (451)
T 3oks_A 348 LVARAQQIEKIMKDRLGRLQAEDDRIGDVRGRGAMIAMELVKAGT--TEP---DADLTKALCAGAH-AAGVIVLSCGTY- 420 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEBSTTS--CCB---CHHHHHHHHHHHH-HTTEECEEECTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEeeEEEEEEEecCcc--CCC---CHHHHHHHHHHHH-hCCcEEecCCCC-
Confidence 344444444444444444444443222223346688888743100 000 0012456778764 889999997544
Q ss_pred cCcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhhc
Q psy788 89 SDEHKHLGENLIRYCFF--KKDETLREASSILQTWRNK 124 (126)
Q Consensus 89 ~~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~~ 124 (126)
.+++|++++ .+++++++++++|.+++++
T Consensus 421 --------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 421 --------GNVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp --------SCEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred --------CCEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 257888766 3889999999999988763
No 145
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=98.12 E-value=3.1e-05 Score=57.70 Aligned_cols=99 Identities=16% Similarity=0.052 Sum_probs=67.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-----CCcccC-CCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeE
Q psy788 8 CYFYTISEELRPKREILADALDKA-----GMVPVI-PDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQG 81 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~-----g~~~~~-p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v 81 (126)
.+++.+++.+.++++.+.+.|.+. |+++.. +.++.++|+++...+ + +...+ ..++.+.||.+
T Consensus 298 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~-~~~l~~~GI~v 365 (447)
T 3h7f_A 298 PEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSP--L---------DGQAA-EDLLHEVGITV 365 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSS--C---------CHHHH-HHHHHHTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCC--C---------CHHHH-HHHHHHCCeEE
Confidence 367888999999999999999887 777643 567889999986432 1 23344 44566889999
Q ss_pred e----CCCCcccCcccCCCCCeEEEEee------CChhHHHHHHHHHHHhhh
Q psy788 82 I----PPSAFYSDEHKHLGENLIRYCFF------KKDETLREASSILQTWRN 123 (126)
Q Consensus 82 ~----pg~~f~~~~~~~~~~~~~Rl~~~------~~~e~i~~~~~~l~~~~~ 123 (126)
. |+..+... .++++|++.. .++++++++++.|.++++
T Consensus 366 ~~~~i~~~~~~p~-----~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~ 412 (447)
T 3h7f_A 366 NRNAVPNDPRPPM-----VTSGLRIGTPALATRGFGDTEFTEVADIIATALA 412 (447)
T ss_dssp BC------------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred ecccCCCCCCCCC-----CCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHh
Confidence 8 65333221 3578999875 256889999999988765
No 146
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=98.11 E-value=9.2e-06 Score=59.05 Aligned_cols=86 Identities=16% Similarity=0.128 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC---CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 11 YTISEELRPKREILADALDKAG---MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 11 ~~~r~~~~~r~~~l~~~l~~~g---~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
+++++.++++++.+.+.|.+++ +....+.|+| +++.++. +..++++.|. ++||.+.||+
T Consensus 302 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~-~~~~~~~--------------~~~~l~~~l~-~~gi~v~~~~-- 363 (392)
T 3ruy_A 302 EKLTERSLQLGEKLVGQLKEIDNPMITEVRGKGLF-IGIELNE--------------PARPYCEQLK-AAGLLCKETH-- 363 (392)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEETTE-EEEEESS--------------CSHHHHHHHH-TTTEECCCBT--
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCceEEEeeeeE-EEEEEcc--------------hHHHHHHHHH-HCCcEEecCC--
Confidence 4678889999999999998764 3445566665 4455764 1557888865 8899998853
Q ss_pred ccCcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhh
Q psy788 88 YSDEHKHLGENLIRYCFF--KKDETLREASSILQTWRN 123 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~ 123 (126)
.+++|++++ .+++++++++++|.++++
T Consensus 364 ---------~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 392 (392)
T 3ruy_A 364 ---------ENVIRIAPPLVISEEDLEWAFQKIKAVLS 392 (392)
T ss_dssp ---------TTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred ---------CCEEEEECCCCCCHHHHHHHHHHHHHHhC
Confidence 468999955 488999999999988763
No 147
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=98.11 E-value=1.6e-05 Score=59.37 Aligned_cols=101 Identities=12% Similarity=0.003 Sum_probs=60.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
.+++++++..+..++.+.+.+.+++.....+..|+|+|+++..... ..+ +.....+++..|+ ++||.+.|+..|
T Consensus 345 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~---~~~~~~~~~~~l~-~~Gv~v~~~~~~ 418 (453)
T 4ffc_A 345 DLPARARAIEASVTSRLSALAEEVDIIGEVRGRGAMLAIEIVKPGT--LEP---DAALTKSIAAEAL-SQGVLILTCGTF 418 (453)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHCSSEEEEEEETTEEEEEEBCTTS--CCB---CHHHHHHHHHHHH-HTTEECCEECTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeeceEEEEEEecCcc--cCC---CHHHHHHHHHHHH-hCCCEEecCCCC
Confidence 3444555444444444555444443222223346688888843100 000 0012456777764 889999997544
Q ss_pred ccCcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhh
Q psy788 88 YSDEHKHLGENLIRYCFF--KKDETLREASSILQTWRN 123 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~ 123 (126)
.+++|++++ .+++++++++++|.++++
T Consensus 419 ---------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 447 (453)
T 4ffc_A 419 ---------GNVIRLLPPLVIGDDLLDEGITALSDIIR 447 (453)
T ss_dssp ---------SCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ---------CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 357888766 488999999999998876
No 148
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=98.10 E-value=8.5e-05 Score=54.16 Aligned_cols=103 Identities=9% Similarity=0.019 Sum_probs=73.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccC-CCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVI-PDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~-p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
.++..+++.+.++++.+.+.|.+.|+++.. +.++.++|++++..+ + +...+... +.++||.+.++..
T Consensus 278 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~-l~~~gi~v~~~~~ 345 (417)
T 3n0l_A 278 DEWKVYAKQVRTNAQVLANVLMDRKFKLVSDGTDNHLVLMSFLDRE--F---------SGKDADLA-LGNAGITANKNTV 345 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTSS--S---------CHHHHHHH-HHHTTEECEECCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCceeccCCCCceEEEEEcccCC--C---------CHHHHHHH-HHHcCeEEecccc
Confidence 466788889999999999999887777644 455678999886432 1 24556665 4688999998765
Q ss_pred cccCcccCCCCCeEEEEeeC------ChhHHHHHHHHHHHhhh
Q psy788 87 FYSDEHKHLGENLIRYCFFK------KDETLREASSILQTWRN 123 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~------~~e~i~~~~~~l~~~~~ 123 (126)
++.... ......+|+++.. ++++++++++.|.++++
T Consensus 346 ~~~~~~-~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~ 387 (417)
T 3n0l_A 346 PGEIRS-PFITSGLRLGTPALTARGFKEKEMEIVSNYIADILD 387 (417)
T ss_dssp TTCCSC-TTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCcc-cCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHh
Confidence 543210 1134679999863 46889999999988775
No 149
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=98.10 E-value=2.8e-05 Score=58.10 Aligned_cols=104 Identities=13% Similarity=0.021 Sum_probs=67.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKAG-MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~g-~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
+.+++++++..+..++.+.+.+.+++ +....+.| .|+++++...... ..+.........++++.|+ ++||.+.|+.
T Consensus 348 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~ 424 (460)
T 3gju_A 348 MDLVTNAGETGAYFRAELAKAVGGHKNVGEVRGDG-MLAAVEFVADKDD-RVFFDASQKIGPQVATALA-ASGVIGRAMP 424 (460)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEET-TEEEEEECSBTTT-TBCCCGGGCHHHHHHHHHH-HTTEECEECS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeee-EEEEEEEccCccc-cccccchHHHHHHHHHHHH-HCCeEEecCC
Confidence 45677788888877887777777663 33444554 4777777542100 0000000001446777765 7899999975
Q ss_pred CcccCcccCCCCCeEEEEe--eCChhHHHHHHHHHHHhhh
Q psy788 86 AFYSDEHKHLGENLIRYCF--FKKDETLREASSILQTWRN 123 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~--~~~~e~i~~~~~~l~~~~~ 123 (126)
. .+++||+. ..+++++++++++|.++++
T Consensus 425 ----~------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 454 (460)
T 3gju_A 425 ----Q------GDILGFAPPLCLTREQADIVVSKTADAVK 454 (460)
T ss_dssp ----S------SCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ----C------CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 1 47899994 4589999999999998876
No 150
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=98.04 E-value=3.9e-05 Score=55.64 Aligned_cols=107 Identities=9% Similarity=0.078 Sum_probs=74.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-CCcccC------CCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCe
Q psy788 7 KCYFYTISEELRPKREILADALDKA-GMVPVI------PDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKL 79 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~------p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV 79 (126)
.++++++++.++++++.+.+.|+++ ++.+.. +.+++++|+.++.... . +..++.+.|. ++||
T Consensus 249 ~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~l~~~L~-~~gI 317 (388)
T 1b9h_A 249 LARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTE-E---------RRNALVDRLV-EAGL 317 (388)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCH-H---------HHHHHHHHHH-HTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCc-c---------cHHHHHHHHH-HCCC
Confidence 3567888899999999999999887 777654 4678999999975210 0 3567888865 7899
Q ss_pred eEeCCCCcccCcc----------------------cCCCCCeEEEEeeC---ChhHHHHHHHHHHHhhhc
Q psy788 80 QGIPPSAFYSDEH----------------------KHLGENLIRYCFFK---KDETLREASSILQTWRNK 124 (126)
Q Consensus 80 ~v~pg~~f~~~~~----------------------~~~~~~~~Rl~~~~---~~e~i~~~~~~l~~~~~~ 124 (126)
.+.+++.-..... .....+.+||++.. ++++++..++.|.+++++
T Consensus 318 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 318 PAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp CEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 9988753210000 00012468999874 678899999999887654
No 151
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=98.02 E-value=2.7e-05 Score=57.44 Aligned_cols=89 Identities=15% Similarity=0.072 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCccc
Q psy788 10 FYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYS 89 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~ 89 (126)
+.++++.++++++.+.+.|.++ +....+. |.|+|+++.... . ... ++..|+ ++||.+.|+.
T Consensus 327 ~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~-g~~~~i~~~~~~---~--------~~~-~~~~l~-~~Gv~v~~~~---- 387 (419)
T 2eo5_A 327 VKDLLPHVNEIGKIFAEELQGL-ADDVRGI-GLAWGLEYNEKK---V--------RDR-IIGESF-KRGLLLLPAG---- 387 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS-SSEEEEE-TTEEEEECSCHH---H--------HHH-HHHHHH-HTTEECEEET----
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-hhheEee-eEEEEEEEecCc---c--------HHH-HHHHHH-HCCCEEecCC----
Confidence 3347888999999999999875 3334444 557788884211 0 244 888875 8899999852
Q ss_pred CcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhhc
Q psy788 90 DEHKHLGENLIRYCFF--KKDETLREASSILQTWRNK 124 (126)
Q Consensus 90 ~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~~ 124 (126)
.+++|++++ .+++++++++++|.+++++
T Consensus 388 -------~~~lRis~~~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 388 -------RSAIRVIPPLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp -------TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -------CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 368999775 4899999999999988753
No 152
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=97.97 E-value=8.4e-05 Score=56.24 Aligned_cols=92 Identities=5% Similarity=-0.079 Sum_probs=68.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 7 KCYFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
..+++.+.+...++++.+.+.|.+. ++.+..+..+ ++|+..+.. +..++.+.|. ++||.+ +|.
T Consensus 372 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~-~~~~~~~~~-------------~~~~l~~~L~-~~Gi~v-~g~ 435 (514)
T 3mad_A 372 EEGYLDATRRILQAADRLKAGVRAIPSLKILGDPLW-VIAVASDEL-------------NIYQVMEEMA-GRGWRL-NGL 435 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCSS-EEEEECSSS-------------CHHHHHHHHH-TTTCBC-EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeE-EEEEeCCCC-------------CHHHHHHHHH-hcCCEe-ccC
Confidence 3567788889999999999999987 7887666665 666665431 3667888865 779987 543
Q ss_pred CcccCcccCCCCCeEEEEeeC---ChhHHHHHHHHHHHhhh
Q psy788 86 AFYSDEHKHLGENLIRYCFFK---KDETLREASSILQTWRN 123 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~~---~~e~i~~~~~~l~~~~~ 123 (126)
.| ++++|++++. +.+++++++++|.++++
T Consensus 436 ~~---------~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~ 467 (514)
T 3mad_A 436 HR---------PPAFHVALTLRHTEPGVVDRFLADLQDAVA 467 (514)
T ss_dssp TT---------TTEEEEECCGGGGSTTHHHHHHHHHHHHHH
T ss_pred CC---------CCeEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 22 4679999983 56889999999988765
No 153
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=97.96 E-value=5.1e-05 Score=55.20 Aligned_cols=91 Identities=5% Similarity=0.072 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 11 YTISEELRPKREILADALDKAG----MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 11 ~~~r~~~~~r~~~l~~~l~~~g----~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
..+++.++++++.+.+.|++.+ .....+..|+++|+.++.... .+..++++.|. ++||.+.|+.
T Consensus 302 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~~l~-~~gi~v~~~~- 369 (406)
T 4adb_A 302 PEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYA----------GQAKQISQEAA-KAGVMVLIAG- 369 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTT----------TCHHHHHHHHH-HTTEECEESS-
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcH----------HHHHHHHHHHH-HCCcEEeecC-
Confidence 5678888888898888887652 222233457899999875210 03567888875 6799999842
Q ss_pred cccCcccCCCCCeEEEEe--eCChhHHHHHHHHHHHhhh
Q psy788 87 FYSDEHKHLGENLIRYCF--FKKDETLREASSILQTWRN 123 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~--~~~~e~i~~~~~~l~~~~~ 123 (126)
.+++|+++ ..+++++++++++|.++++
T Consensus 370 ----------~~~iRi~~~~~~~~e~i~~~~~~l~~~l~ 398 (406)
T 4adb_A 370 ----------GNVVRFAPALNVSEEEVTTGLDRFAAACE 398 (406)
T ss_dssp ----------TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ----------CCeEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 47899954 4588999999999998875
No 154
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=97.92 E-value=0.00015 Score=52.45 Aligned_cols=102 Identities=7% Similarity=0.035 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccc-CC-----CcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 12 TISEELRPKREILADALDKAGMVPV-IP-----DGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 12 ~~r~~~~~r~~~l~~~l~~~g~~~~-~p-----~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
...+..++.++.+.+.|.+.++++. .| .+++++|+.++...... +..++.+.|. +.||.+.+|.
T Consensus 261 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---------~~~~l~~~l~-~~gi~v~~~~ 330 (393)
T 1mdo_A 261 ALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGI---------TRDALMASLK-TKGIGTGLHF 330 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSS---------CHHHHHHHHH-HTTBCCBCCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEEeccccccc---------CHHHHHHHHH-hCCCCccccc
Confidence 3334444445556677766565543 23 46778999987310001 3567888864 7899999987
Q ss_pred CcccC-----------cccC---CCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 86 AFYSD-----------EHKH---LGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 86 ~f~~~-----------~~~~---~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
..... .-+. ...+.+|+++.. ++++++..++.|.++++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~ 384 (393)
T 1mdo_A 331 RAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAG 384 (393)
T ss_dssp CCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred CccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 54100 0000 013589999984 88999999999988776
No 155
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=97.91 E-value=8.6e-05 Score=53.98 Aligned_cols=97 Identities=12% Similarity=0.082 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCCC---cceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 10 FYTISEELRPKREILADALDKAGMVPVIPD---GGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~---gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
++.++++++++++.+.+.|.+.|+++..|. ++....+..+. .+..+...| .++||.+.||..
T Consensus 273 ~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~--------------~~~~~~~~L-~~~Gi~v~~g~~ 337 (379)
T 3ke3_A 273 FDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTER--------------DDMHKGSAF-AEAGLQIAAGVP 337 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECSC--------------HHHHSSHHH-HHTTCCCEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEccCC--------------cchHHHHHH-HHCCeEEeCCcc
Confidence 567788888899999999988887765443 22222222221 122234554 588999999986
Q ss_pred cccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 87 FYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
+.... ....+.+|+++.. ++++++.+++.|.++++
T Consensus 338 ~~~~~--~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~ 374 (379)
T 3ke3_A 338 LKVGE--PDNFKTFRLGLFGLDKLTDIDGTVERFEKALD 374 (379)
T ss_dssp CSSCC--CTTCCEEEEECCSHHHHTCHHHHHHHHHHHHH
T ss_pred ccccc--cCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHH
Confidence 65321 0135799999974 77889999999988765
No 156
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=97.90 E-value=9.1e-05 Score=55.11 Aligned_cols=90 Identities=18% Similarity=0.196 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcc--cCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCccc
Q psy788 12 TISEELRPKREILADALDKAGMVP--VIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYS 89 (126)
Q Consensus 12 ~~r~~~~~r~~~l~~~l~~~g~~~--~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~ 89 (126)
.+.+.++++++.+.+.|++.++++ ..+..|.|+|++++.... . +..+++..|. ++||.+.|+
T Consensus 344 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~g~~~~v~l~~~~~-~---------~~~~l~~~l~-~~Gv~v~~~----- 407 (439)
T 2oat_A 344 NLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKD-W---------DAWKVCLRLR-DNGLLAKPT----- 407 (439)
T ss_dssp THHHHHHHHHHHHHHHHTTSCTTTEEEEEEETTEEEEEECCCSS-C---------CHHHHHHHHH-HTTEECCBS-----
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeEEEEEEecCcc-H---------HHHHHHHHHH-HCCeEEecC-----
Confidence 356778888888889888765443 223456788999874210 0 2567888875 789999883
Q ss_pred CcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhh
Q psy788 90 DEHKHLGENLIRYCFF--KKDETLREASSILQTWRN 123 (126)
Q Consensus 90 ~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~ 123 (126)
+.+++|++++ .+++++++++++|.++++
T Consensus 408 ------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 437 (439)
T 2oat_A 408 ------HGDIIRFAPPLVIKEDELRESIEIINKTIL 437 (439)
T ss_dssp ------SSSEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ------CCCEEEEECccCCCHHHHHHHHHHHHHHHH
Confidence 2478999776 489999999999998775
No 157
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=97.87 E-value=8.1e-05 Score=55.50 Aligned_cols=88 Identities=8% Similarity=-0.011 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHh-----------CCCcccCCC----cceEEEEeeCCcccccccCCCCCchhhHHHHHHHH
Q psy788 10 FYTISEELRPKREILADALDK-----------AGMVPVIPD----GGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMT 74 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~-----------~g~~~~~p~----gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 74 (126)
++++++.+.+.++++.+.|++ .|+++..|. .|.++|+.++. +..++++.|.
T Consensus 354 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~--------------~~~~l~~~L~ 419 (465)
T 3e9k_A 354 MKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV--------------PNKDVFQELE 419 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECC--------------TTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC--------------CHHHHHHHHH
Confidence 788999999999999999987 367776665 36688888872 1345777764
Q ss_pred HhCCeeEeCCCCcccCcccCCCCCeEEEEe-eC--ChhHHHHHHHHHHHhhh
Q psy788 75 KNVKLQGIPPSAFYSDEHKHLGENLIRYCF-FK--KDETLREASSILQTWRN 123 (126)
Q Consensus 75 ~~~gV~v~pg~~f~~~~~~~~~~~~~Rl~~-~~--~~e~i~~~~~~l~~~~~ 123 (126)
+.||.+. +. .++++|+++ .. +.++++++++.|.++++
T Consensus 420 -~~Gi~v~----~~-------~~~~iRis~~~~~~t~edi~~~~~~l~~~l~ 459 (465)
T 3e9k_A 420 -KRGVVCD----KR-------NPNGIRVAPVPLYNSFHDVYKFTNLLTSILD 459 (465)
T ss_dssp -TTTEECE----EE-------TTTEEEEBCCTTTCCHHHHHHHHHHHHHHHT
T ss_pred -HCCEEEe----cC-------CCCEEEEeCcccCCCHHHHHHHHHHHHHHHH
Confidence 7799876 22 358999998 32 88899999999998876
No 158
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=97.84 E-value=8.9e-05 Score=55.13 Aligned_cols=101 Identities=17% Similarity=0.199 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
.+++++++..+..++.+.+ +.+++.....+..|+|+|++++..... ..+.........+++..|+ ++||.+.|+
T Consensus 339 ~~~~~~~~~~~~~~~~l~~-l~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~--- 412 (448)
T 3dod_A 339 NIVEQVAEKSKKLHFLLQD-LHALPHVGDIRQLGFMCGAELVRSKET-KEPYPADRRIGYKVSLKMR-ELGMLTRPL--- 412 (448)
T ss_dssp THHHHHHHHHHHHHHHHHH-HTTSTTEEEEEEETTEEEEEECSBTTT-TBCCCGGGCHHHHHHHHHH-HTTEECCEE---
T ss_pred cHHHHHHHHHHHHHHHHHH-HhcCCCeEEEEeeeEEEEEEEccCccc-ccccchhhHHHHHHHHHHH-HCCcEEecc---
Confidence 3455555555555555555 544432222233466888988642100 0000000001357888865 779999875
Q ss_pred ccCcccCCCCCeEEEE--eeCChhHHHHHHHHHHHhhh
Q psy788 88 YSDEHKHLGENLIRYC--FFKKDETLREASSILQTWRN 123 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~--~~~~~e~i~~~~~~l~~~~~ 123 (126)
.+++|++ ++.+++++++++++|.++++
T Consensus 413 ---------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 441 (448)
T 3dod_A 413 ---------GDVIAFLPPLASTAEELSEMVAIMKQAIH 441 (448)
T ss_dssp ---------TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ---------CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 1579995 45589999999999998875
No 159
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=97.83 E-value=0.00011 Score=54.25 Aligned_cols=105 Identities=12% Similarity=0.022 Sum_probs=62.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEeeCCccc--ccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRP--MLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
.+++++++..+.-++.+.+.+.++++....+..|+|+|++++.... ++......+.....+++..|+ ++||.+.|+.
T Consensus 322 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~ 400 (429)
T 4e77_A 322 GVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLML-EEGVYLAPSA 400 (429)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHH-HTTEECCSST
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHH-HCCeEEeecC
Confidence 3444444444444444444444445555556678899999875210 000000000012357888865 7799999863
Q ss_pred CcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 86 AFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
...+|+++..+++++++++++|.+++++
T Consensus 401 -----------~~~~~~~~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 401 -----------FEAGFMSLAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp -----------TSCEECCTTCCHHHHHHHHHHHHHHHTT
T ss_pred -----------CCCEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 1246777777999999999999988764
No 160
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=97.82 E-value=0.00013 Score=54.89 Aligned_cols=97 Identities=5% Similarity=-0.068 Sum_probs=69.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 8 CYFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
..++.+.+++.++.+.+.+.|.+. ++.+..|.....+++.++... ....++.+.|..+.++.+.|+..
T Consensus 369 ~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~~-----------~~~~~l~~~L~~~g~~~~~~~~~ 437 (475)
T 3k40_A 369 ENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSN-----------ERNEALLKRINGRGHIHLVPAKI 437 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSCH-----------HHHHHHHHHHHHHTSCBCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCch-----------HHHHHHHHHHHhCCcEEEEeeEE
Confidence 456788888899999999999988 788765555556677775321 03567888876554445555432
Q ss_pred cccCcccCCCCCeEEEEeeC---ChhHHHHHHHHHHHhhh
Q psy788 87 FYSDEHKHLGENLIRYCFFK---KDETLREASSILQTWRN 123 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~---~~e~i~~~~~~l~~~~~ 123 (126)
+ +..++|++++. ++++++.+++.|.++.+
T Consensus 438 ~--------g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~ 469 (475)
T 3k40_A 438 K--------DVYFLRMAICSRFTQSEDMEYSWKEVSAAAD 469 (475)
T ss_dssp T--------TEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred C--------CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 2 35799999873 67899999999987754
No 161
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=97.80 E-value=7.4e-05 Score=55.72 Aligned_cols=88 Identities=9% Similarity=0.049 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHHhC----C--CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 12 TISEELRPKREILADALDKA----G--MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 12 ~~r~~~~~r~~~l~~~l~~~----g--~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
.+.+.++++++.+.+.|++. . +....+.|. |++++++... +..+++..|+ ++||.+.|+.
T Consensus 352 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~-~~~~~~~~~~------------~~~~~~~~l~-~~Gv~v~~~g 417 (449)
T 2cjg_A 352 GLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGL-MCAFSLPTTA------------DRDELIRQLW-QRAVIVLPAG 417 (449)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETT-EEEEECSSHH------------HHHHHHHHHH-HTTEECEEET
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccE-EEEEEECChH------------HHHHHHHHHH-HCCeEEecCC
Confidence 45677788888888888753 2 333455555 5667886421 3567888876 7899999851
Q ss_pred CcccCcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhhc
Q psy788 86 AFYSDEHKHLGENLIRYCFF--KKDETLREASSILQTWRNK 124 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~~ 124 (126)
.+++|++++ .+++++++++++|.+++++
T Consensus 418 -----------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 447 (449)
T 2cjg_A 418 -----------ADTVRFRPPLTVSTAEIDAAIAAVRSALPV 447 (449)
T ss_dssp -----------TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 368999665 5899999999999988753
No 162
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=97.79 E-value=9.6e-05 Score=54.42 Aligned_cols=89 Identities=17% Similarity=0.067 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHhCC---------------CcccCCC----cceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHh
Q psy788 16 ELRPKREILADALDKAG---------------MVPVIPD----GGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKN 76 (126)
Q Consensus 16 ~~~~r~~~l~~~l~~~g---------------~~~~~p~----gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 76 (126)
...++...+.+.++++. +++..|+ |+|+.| +++. ..+.+..++.+
T Consensus 266 ~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~-~~~~---------------~~~~~~~~l~~ 329 (404)
T 1e5e_A 266 AESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITF-ILKS---------------GFEGAKKLLDN 329 (404)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEE-EETT---------------HHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEE-EeCC---------------CHHHHHHHHHh
Confidence 34556666677776541 1222233 898888 7763 11223345678
Q ss_pred CCeeEeCCCCcccCc-------c-c----------CCC--CCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 77 VKLQGIPPSAFYSDE-------H-K----------HLG--ENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 77 ~gV~v~pg~~f~~~~-------~-~----------~~~--~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
.|| +.+|..|+... . . ..+ ++++|+|++. +++++.++.|.++++
T Consensus 330 ~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~--e~~~~li~~l~~al~ 393 (404)
T 1e5e_A 330 LKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI--EDADELIADFKQGLD 393 (404)
T ss_dssp CSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHHH
T ss_pred CCC-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHHHHH
Confidence 899 78887776300 0 0 012 6899999998 455666666655543
No 163
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=97.79 E-value=0.00017 Score=54.33 Aligned_cols=97 Identities=8% Similarity=-0.015 Sum_probs=68.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 8 CYFYTISEELRPKREILADALDKA-GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
+.++.+.+...++.+.+.+.|.+. |+.+..|....++++.++... ....++.+.|..+..+.+.|+..
T Consensus 376 ~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~-----------~~~~~l~~~L~~~g~~~~~~~~~ 444 (481)
T 4e1o_A 376 KNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPN-----------SLTENVLKEIAKAGRLFLIPATI 444 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSCH-----------HHHHHHHHHHHHHCSSBCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCch-----------HHHHHHHHHHHhCCeEEEEeeEE
Confidence 467788888999999999999887 788765555567777776421 02567888876443355554322
Q ss_pred cccCcccCCCCCeEEEEeeC---ChhHHHHHHHHHHHhhh
Q psy788 87 FYSDEHKHLGENLIRYCFFK---KDETLREASSILQTWRN 123 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~---~~e~i~~~~~~l~~~~~ 123 (126)
. +..++|++++. ++++++.++++|.++.+
T Consensus 445 ~--------g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~ 476 (481)
T 4e1o_A 445 Q--------DKLIIRFTVTSQFTTRDDILRDWNLIRDAAT 476 (481)
T ss_dssp T--------TEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred C--------CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 1 35789999874 57899999999987654
No 164
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=97.78 E-value=0.00015 Score=53.38 Aligned_cols=86 Identities=14% Similarity=0.029 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHHHhC----CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 12 TISEELRPKREILADALDKA----GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 12 ~~r~~~~~r~~~l~~~l~~~----g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
.+.+.++++++.+.+.|++. ++....+. |.|+|++++.. . +..++...|. ++||.+.|+
T Consensus 331 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~-g~~~~~~~~~~---~---------~~~~l~~~l~-~~Gi~v~~~--- 393 (429)
T 1s0a_A 331 DWQQQVADIEVQLREQLAPARDAEMVADVRVL-GAIGVVETTHP---V---------NMAALQKFFV-EQGVWIRPF--- 393 (429)
T ss_dssp HHHHHHHHHHHHHHHHHGGGGGCTTEEEEEEE-TTEEEEEESSC---B---------CHHHHHHHHH-HTTEECCCB---
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEe-eEEEEEEECCc---c---------cHHHHHHHHH-HCCCEEecc---
Confidence 35667778888888888764 23323444 45899998752 1 3567888875 789999872
Q ss_pred ccCcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhh
Q psy788 88 YSDEHKHLGENLIRYCFF--KKDETLREASSILQTWRN 123 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~ 123 (126)
.+++|++++ .+++++++++++|.++++
T Consensus 394 ---------~~~iRis~~~~~t~e~i~~~~~~l~~~~~ 422 (429)
T 1s0a_A 394 ---------GKLIYLMPPYIILPQQLQRLTAAVNRAVQ 422 (429)
T ss_dssp ---------TTEEEECCCTTCCHHHHHHHHHHHHHHTS
T ss_pred ---------CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 258999965 489999999999998765
No 165
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=97.77 E-value=0.00017 Score=53.18 Aligned_cols=90 Identities=9% Similarity=0.076 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhC--CCc---ccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 11 YTISEELRPKREILADALDKA--GMV---PVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 11 ~~~r~~~~~r~~~l~~~l~~~--g~~---~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
..+++.++++++.+.+.|++. +++ ...+. |.|+|++++.... .+..++++.|. ++||.+.|+.
T Consensus 320 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-g~~~~v~~~~~~~----------~~~~~l~~~l~-~~Gi~v~~~~ 387 (420)
T 2pb2_A 320 PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGM-GLLIGAELKPKYK----------GRARDFLYAGA-EAGVMVLNAG 387 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-TTEEEEEECGGGT----------TCHHHHHHHHH-HTTEECEESS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec-ceEEEEEECCCch----------HHHHHHHHHHH-HCCCEEEeCC
Confidence 356778888888888888764 222 23344 5678888864210 02567888875 6899999862
Q ss_pred CcccCcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhh
Q psy788 86 AFYSDEHKHLGENLIRYCFF--KKDETLREASSILQTWRN 123 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~ 123 (126)
++++|++++ .+++++++++++|.++++
T Consensus 388 -----------~~~iRl~~~~~~t~eei~~~~~~l~~~l~ 416 (420)
T 2pb2_A 388 -----------ADVMRFAPSLVVEEADIHEGMQRFAQAVG 416 (420)
T ss_dssp -----------TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred -----------CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 368999965 488999999999998775
No 166
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=97.75 E-value=0.00015 Score=53.82 Aligned_cols=89 Identities=11% Similarity=0.078 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHhC--CCcc--cCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 12 TISEELRPKREILADALDKA--GMVP--VIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 12 ~~r~~~~~r~~~l~~~l~~~--g~~~--~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
.+.+.++++++.+.+.|++. ++++ ..+..|.|+|++++... . +..+++..|. ++||.+.|+
T Consensus 333 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~--~---------~~~~~~~~l~-~~Gv~v~~~--- 397 (433)
T 1z7d_A 333 KLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNEL--V---------NVLDICLKLK-ENGLITRDV--- 397 (433)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTT--C---------CHHHHHHHHH-HTTEECCEE---
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccCh--h---------HHHHHHHHHH-HCCeEEecC---
Confidence 35667777778888888764 4432 22345678899987421 0 2567888875 789999884
Q ss_pred ccCcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhh
Q psy788 88 YSDEHKHLGENLIRYCFF--KKDETLREASSILQTWRN 123 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~ 123 (126)
+.+++|++++ .+++++++++++|.++++
T Consensus 398 --------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 427 (433)
T 1z7d_A 398 --------HDKTIRLTPPLCITKEQLDECTEIIVKTVK 427 (433)
T ss_dssp --------TTTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred --------CCCEEEEECCcCCCHHHHHHHHHHHHHHHH
Confidence 1468999776 389999999999988765
No 167
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=97.71 E-value=0.00078 Score=51.21 Aligned_cols=100 Identities=14% Similarity=0.113 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccC-CCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcc
Q psy788 10 FYTISEELRPKREILADALDKAGMVPVI-PDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFY 88 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~g~~~~~-p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~ 88 (126)
++..++++.++++.+.+.|.+.|+++.. +....++|++++..+ + +..++... +.+.||.+.+++.++
T Consensus 333 ~~~~~~~~~~na~~L~~~L~~~G~~v~~~~t~t~lv~vdl~~~g--~---------~~~~~~~~-L~~~GI~v~~~~~p~ 400 (490)
T 2a7v_A 333 FREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKG--L---------DGARAERV-LELVSITANKNTCPG 400 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTTT--C---------CHHHHHHH-HHHTTEECEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcEEecCCCCCeEEEEEeCCCC--C---------CHHHHHHH-HHhCCeEEecCccCC
Confidence 4667788888999999999888888754 345678999987532 1 25566665 468999999877666
Q ss_pred cCcccCCCCCeEEEEee------CChhHHHHHHHHHHHhhh
Q psy788 89 SDEHKHLGENLIRYCFF------KKDETLREASSILQTWRN 123 (126)
Q Consensus 89 ~~~~~~~~~~~~Rl~~~------~~~e~i~~~~~~l~~~~~ 123 (126)
... +-.+..+|++.. .++++++..++.|.++++
T Consensus 401 d~~--p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 401 DRS--AITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp CCC--SSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCC--CCCCCceEecccccccCCCCHHHHHHHHHHHHHHHH
Confidence 421 124578999662 266777777777766553
No 168
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=97.70 E-value=0.00011 Score=54.11 Aligned_cols=99 Identities=11% Similarity=0.049 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHHHhC----CCcccCCCcceEEEEeeCCccc-ccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 12 TISEELRPKREILADALDKA----GMVPVIPDGGYFMVADWTQLRP-MLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 12 ~~r~~~~~r~~~l~~~l~~~----g~~~~~p~gg~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
.+.+.++++++.+.+.|++. ++....+..|.|+|++++.... .+......+..+..+++..|+ ++||.+.||..
T Consensus 321 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~ 399 (424)
T 2e7u_A 321 GYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPPSNF 399 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEeccCC
Confidence 46677777888887777653 5433223455689999864100 000000000012457888875 88999999741
Q ss_pred cccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhh
Q psy788 87 FYSDEHKHLGENLIRYCFFKKDETLREASSILQTWR 122 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~ 122 (126)
..+|+++..+++++++++++|.+++
T Consensus 400 -----------~~~~~~~~~t~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 400 -----------EAAFLSVAHREEDVEKTLEALRKAL 424 (424)
T ss_dssp -----------SCEECCTTCCHHHHHHHHHHHHHHC
T ss_pred -----------CceEeeccCCHHHHHHHHHHHHHhC
Confidence 2378887779999999999998753
No 169
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=97.65 E-value=0.00027 Score=52.07 Aligned_cols=98 Identities=11% Similarity=-0.059 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHh----CCCcccCCCcceEEEEeeCCccc-ccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcc
Q psy788 14 SEELRPKREILADALDK----AGMVPVIPDGGYFMVADWTQLRP-MLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFY 88 (126)
Q Consensus 14 r~~~~~r~~~l~~~l~~----~g~~~~~p~gg~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~ 88 (126)
.+.++++++.+.+.|.+ +++....+..|.|+++++..... +.......+.....++++.|+ ++||.+.|+.
T Consensus 326 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~--- 401 (434)
T 3l44_A 326 YEKLDELGATLEKGILEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLML-QEGVNLAPSK--- 401 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHH-HTTEECCSST---
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHH-HCCeEEeecC---
Confidence 33444444444444443 44433334455677777743110 000000000011356777765 7899998862
Q ss_pred cCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 89 SDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 89 ~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
.+++|+++..+++++++++++|.++++
T Consensus 402 --------~~~~rl~~~~t~e~i~~~l~~l~~~l~ 428 (434)
T 3l44_A 402 --------YEAWFLTTEHTKEDIEYTIEAVGRAFA 428 (434)
T ss_dssp --------TCCEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred --------CCcEEEecccCHHHHHHHHHHHHHHHH
Confidence 235788887799999999999998875
No 170
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=97.64 E-value=0.00039 Score=49.86 Aligned_cols=105 Identities=5% Similarity=-0.086 Sum_probs=70.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC----Cc-ceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeE
Q psy788 8 CYFYTISEELRPKREILADALDKA-GMVPVIP----DG-GYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQG 81 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p----~g-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v 81 (126)
.+++.+.+.++++++.+.+.|.++ ++.+..| .+ ++++|+.++..+ .. +..++.+.| .++||.+
T Consensus 244 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------~~~~l~~~L-~~~gi~v 312 (375)
T 2fnu_A 244 KKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKF--FT--------CKKLILESL-HKRGILA 312 (375)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGG--GG--------GHHHHHHHH-HHTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccc--cc--------hHHHHHHHH-HHCCCCc
Confidence 467788899999999999999887 6666444 23 455688886421 10 255788886 5789999
Q ss_pred eCC----C---Ccc-------cCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 82 IPP----S---AFY-------SDEHKHLGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 82 ~pg----~---~f~-------~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
.++ . .|+ .........+++|++++. ++++++..++.|.++++
T Consensus 313 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~ 370 (375)
T 2fnu_A 313 QVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFE 370 (375)
T ss_dssp BCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred cccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHH
Confidence 832 1 121 000000013789999985 78899999999988765
No 171
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=97.64 E-value=0.00039 Score=51.12 Aligned_cols=99 Identities=14% Similarity=-0.005 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHh----CCCcccCCCcceEEEEeeCCcccc-cccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcc
Q psy788 14 SEELRPKREILADALDK----AGMVPVIPDGGYFMVADWTQLRPM-LRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFY 88 (126)
Q Consensus 14 r~~~~~r~~~l~~~l~~----~g~~~~~p~gg~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~ 88 (126)
.+.++++++.+.+.|.+ +++....+..|+++|+++...... +......+.....+++..|+ ++||.+.|+..
T Consensus 323 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gi~v~~~~~-- 399 (427)
T 3fq8_A 323 YEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGML-EQGIYLAPSQF-- 399 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSSTT--
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHH-HCCcEEecCCC--
Confidence 34444444545444443 344444556688999998642100 00000000012346778765 78999988641
Q ss_pred cCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 89 SDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 89 ~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
..+|+++..+++++++++++|.+++++
T Consensus 400 ---------~r~~~~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 400 ---------EAGFTSLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp ---------SCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---------CCEEeeCcCCHHHHHHHHHHHHHHHHh
Confidence 246677777999999999999988753
No 172
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=97.63 E-value=0.0002 Score=52.87 Aligned_cols=99 Identities=15% Similarity=0.004 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHHhC----CCcccCCCcceEEEEeeCCccc-ccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 13 ISEELRPKREILADALDKA----GMVPVIPDGGYFMVADWTQLRP-MLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 13 ~r~~~~~r~~~l~~~l~~~----g~~~~~p~gg~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
+.+.++++++.+.+.|++. ++....+..|.|+|++++.... .+......+.....+++..|. ++||.+.||.
T Consensus 326 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~-- 402 (434)
T 2epj_A 326 VYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEML-RRGVFIAPSN-- 402 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHH-HTTEECCSST--
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHH-HCCeEEeccC--
Confidence 5566777777777777653 5443234456688999864100 000000000012457888875 7899999973
Q ss_pred ccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 88 YSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
...+|+++..+++++++++++|.++++
T Consensus 403 ---------~~~~~~~~~~t~e~i~~~l~~l~~~l~ 429 (434)
T 2epj_A 403 ---------LEAVFTGLPHQGEALEIAVEGLRSSLK 429 (434)
T ss_dssp ---------TSCEECCTTCSHHHHHHHHHHHHHHHH
T ss_pred ---------CCcEEEeccCCHHHHHHHHHHHHHHHH
Confidence 124788877799999999999988775
No 173
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=97.59 E-value=0.00034 Score=52.49 Aligned_cols=97 Identities=6% Similarity=-0.014 Sum_probs=67.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 7 KCYFYTISEELRPKREILADALDKA-GMVPV-IPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~-~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
..+++.+.+.+.++++.+.+.|.+. ++.+. +|.+++++| .++... ....++.+.|. +.|+.+.++
T Consensus 371 ~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f-~~~~~~-----------~~~~~l~~~L~-~~g~~~~~~ 437 (486)
T 1js3_A 371 VKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCF-RLKGSD-----------GLNEALLERIN-SARKIHLVP 437 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEE-EESSCH-----------HHHHHHHHHHH-HHTSCBCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEE-EecChH-----------HHHHHHHHHHH-hcCCEEEEE
Confidence 3567888888899999999999887 77764 578887665 443210 01467888865 556554443
Q ss_pred CCcccCcccCCCCCeEEEEeeC---ChhHHHHHHHHHHHhhh
Q psy788 85 SAFYSDEHKHLGENLIRYCFFK---KDETLREASSILQTWRN 123 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~~~---~~e~i~~~~~~l~~~~~ 123 (126)
..|. +.+++|++++. +.++++.++++|.++++
T Consensus 438 ~~~~-------~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 472 (486)
T 1js3_A 438 CRLR-------GQFVLRFAICSRKVESGHVRLAWEHIRGLAA 472 (486)
T ss_dssp EEET-------TEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEC-------CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 3342 35799999863 67789999999887654
No 174
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=97.57 E-value=0.00035 Score=52.12 Aligned_cols=101 Identities=6% Similarity=-0.139 Sum_probs=59.5
Q ss_pred hHHHHHH-HHHHHHHHHHHHHHHhCC-CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 8 CYFYTIS-EELRPKREILADALDKAG-MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 8 ~~l~~~r-~~~~~r~~~l~~~l~~~g-~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
.++++++ +.....++.+.+.|.+++ +....+.|. |+++++...... ..+-........+++..|+ ++||.+.|+.
T Consensus 343 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g 419 (459)
T 4a6r_A 343 GIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVGM-VQAFTLVKNKAK-RELFPDFGEIGTLCRDIFF-RNNLIMRACG 419 (459)
T ss_dssp CHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEETT-EEEEEECSBTTT-TBCCSSTTHHHHHHHHHHH-HTTEECEEET
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEE-EEEEEEecCccc-cccccchHHHHHHHHHHHH-HCCeEEecCC
Confidence 4555555 444455555545555443 444455554 677777532100 0000000011456778765 7799998851
Q ss_pred CcccCcccCCCCCeEEEEe--eCChhHHHHHHHHHHHhhh
Q psy788 86 AFYSDEHKHLGENLIRYCF--FKKDETLREASSILQTWRN 123 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~--~~~~e~i~~~~~~l~~~~~ 123 (126)
+++||+. ..+++++++++++|.++++
T Consensus 420 ------------~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 447 (459)
T 4a6r_A 420 ------------DHIVSAPPLVMTRAEVDEMLAVAERCLE 447 (459)
T ss_dssp ------------TEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ------------CEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 5799994 4589999999999988775
No 175
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=97.57 E-value=0.0011 Score=49.66 Aligned_cols=91 Identities=9% Similarity=0.045 Sum_probs=66.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHh-C-CCccc-CCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 8 CYFYTISEELRPKREILADALDK-A-GMVPV-IPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~-~-g~~~~-~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
..++++.+...++++.+.+.|.+ + |+.+. +|.++++.| ..+. . +..++.+.|. +.||.+.++
T Consensus 341 ~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~-~~~~----~---------~~~~l~~~L~-~~Gi~v~~~ 405 (497)
T 3mc6_A 341 NGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISF-SSKT----L---------NIHELSDRLS-KKGWHFNAL 405 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEE-ECTT----T---------THHHHHHHHH-TTTCBCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEE-eCCC----C---------CHHHHHHHHH-hCCEEEecC
Confidence 45677788888899999999998 4 78775 566675555 4432 1 3667888865 789987654
Q ss_pred CCcccCcccCCCCCeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 85 SAFYSDEHKHLGENLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
. .+..+|++++. +.+++++.++.|.++++
T Consensus 406 ~----------~~~~~ri~~~~~t~e~i~~~~~~L~~~l~ 435 (497)
T 3mc6_A 406 Q----------KPVALHMAFTRLSAHVVDEICDILRTTVQ 435 (497)
T ss_dssp C----------SSCCEEEECCTTTTCTHHHHHHHHHHHHH
T ss_pred C----------CCCeEEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 2 13467999986 78889999999988765
No 176
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=97.50 E-value=0.00049 Score=50.47 Aligned_cols=103 Identities=14% Similarity=0.019 Sum_probs=68.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-CCccc--CC-----CcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCC
Q psy788 7 KCYFYTISEELRPKREILADALDKA-GMVPV--IP-----DGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVK 78 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~--~p-----~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 78 (126)
+++++++++.++++++.+.+.|.++ |+.+. .| ..+..+++.++... . +..++...+ .+
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~l---~~ 366 (432)
T 3a9z_A 301 SENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ--L---------RGYMVLAQC---QT 366 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT--C---------CHHHHHHHC---SS
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC--C---------cHHHHHHHh---cC
Confidence 3477889999999999999999885 54432 33 23445666665421 1 244555543 37
Q ss_pred eeEeCCCCcccCc---------ccC----CCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 79 LQGIPPSAFYSDE---------HKH----LGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 79 V~v~pg~~f~~~~---------~~~----~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
+.+.+|..+.... ... ...+++|++++. ++++++.+++.|.++++
T Consensus 367 i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~ 426 (432)
T 3a9z_A 367 LLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVN 426 (432)
T ss_dssp EECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 8888887664310 000 014799999996 78999999999988765
No 177
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=97.49 E-value=0.00034 Score=51.79 Aligned_cols=92 Identities=11% Similarity=-0.010 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHHhCC-Ccc--cCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCccc
Q psy788 13 ISEELRPKREILADALDKAG-MVP--VIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYS 89 (126)
Q Consensus 13 ~r~~~~~r~~~l~~~l~~~g-~~~--~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~ 89 (126)
+.+.++++++.+.+.|.+.+ +++ ..+..|+|+|++++.... . ...+..++...|. ++||.+.|+
T Consensus 350 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~--~-----~~~~~~~~~~~l~-~~Gv~v~~~----- 416 (449)
T 3a8u_X 350 LVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDG--D-----AIVRPFEAGMALW-KAGFYVRFG----- 416 (449)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTT--B-----SSHHHHHHHHHHH-HHTEECEEE-----
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcc--c-----ccccHHHHHHHHH-HCCcEEecC-----
Confidence 56777788888888887642 332 123457789999975210 0 0001236888875 679999985
Q ss_pred CcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhhc
Q psy788 90 DEHKHLGENLIRYCFF--KKDETLREASSILQTWRNK 124 (126)
Q Consensus 90 ~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~~ 124 (126)
+ +++|+++. .+++++++++++|.++++.
T Consensus 417 ------g-~~iRis~~~~~t~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 417 ------G-DTLQFGPTFNSKPQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp ------T-TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------C-CEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 1 57999954 5899999999999988764
No 178
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=97.49 E-value=0.00064 Score=51.23 Aligned_cols=101 Identities=8% Similarity=-0.008 Sum_probs=68.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-CCcc-cCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 7 KCYFYTISEELRPKREILADALDKA-GMVP-VIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~-~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
..+++.+.+...++++.+.+.|++. ++++ .+|.++ ++++.+.......+ .-..++...+ .+.|+.+.++
T Consensus 389 ~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-~v~f~~~~~~~~~~-------~l~~~l~~~l-~~~G~~~~~~ 459 (497)
T 2qma_A 389 PKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLS-TVLFRATHETADLD-------ELNKALRLEA-LTRGIAVLGE 459 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSS-EEEEEECCSSSCHH-------HHHHHHHHHH-HHHTSCBCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCce-EEEEEEcCCccCHH-------HHHHHHHHHH-HhCCCEEEEe
Confidence 3567778888889999999999887 7776 467777 45556643210000 0123566665 4779888776
Q ss_pred CCcccCcccCCCCCeEEEEee---CChhHHHHHHHHHHHhhh
Q psy788 85 SAFYSDEHKHLGENLIRYCFF---KKDETLREASSILQTWRN 123 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~~---~~~e~i~~~~~~l~~~~~ 123 (126)
+.+. +.+++|++++ .+.++++..++.|.++++
T Consensus 460 ~~~~-------g~~~lRis~~~~~~t~edi~~~~~~l~~~~~ 494 (497)
T 2qma_A 460 TIVD-------GKTALKFTILNPCLTTSDFESLLSKINMLAV 494 (497)
T ss_dssp EEET-------TEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEC-------CEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 5442 3579999983 388899999999988765
No 179
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=97.48 E-value=0.00053 Score=51.55 Aligned_cols=88 Identities=15% Similarity=0.019 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHHHhC--CC----cccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 12 TISEELRPKREILADALDKA--GM----VPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 12 ~~r~~~~~r~~~l~~~l~~~--g~----~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
.+.+.++++++.+.+.|++. ++ ....+.| ++++++++... +...++..|+ ++||.+.|+
T Consensus 375 ~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g-~~~~~~~~~~~------------~~~~~~~~l~-~~Gv~~~~~- 439 (472)
T 1ohv_A 375 DLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRG-TFCSFDTPDES------------IRNKLISIAR-NKGVMLGGC- 439 (472)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEET-TEEEEECSSHH------------HHHHHHHHHH-HTTEECEEE-
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCc-eEEEEEeCChh------------HHHHHHHHHH-HCCeEEecC-
Confidence 35677777777787777654 22 2244554 46666775421 3567888876 789999883
Q ss_pred CcccCcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhhc
Q psy788 86 AFYSDEHKHLGENLIRYCFF--KKDETLREASSILQTWRNK 124 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~~ 124 (126)
+.+++|++++ .+++++++++++|.+++++
T Consensus 440 ----------g~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 440 ----------GDKSIRFRPTLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp ----------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ----------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 1468999776 4899999999999988764
No 180
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=97.46 E-value=0.0005 Score=50.66 Aligned_cols=102 Identities=16% Similarity=0.049 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhC----CCcccCCCcceEEEEeeCCccc-ccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 11 YTISEELRPKREILADALDKA----GMVPVIPDGGYFMVADWTQLRP-MLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 11 ~~~r~~~~~r~~~l~~~l~~~----g~~~~~p~gg~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
+++++.++++++.+.+.|.+. ++....+..|.|+++.+..... ++......+.....++++.|+ ++||.+.|+.
T Consensus 320 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~ 398 (429)
T 3k28_A 320 PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMV-EQGVFLPPSQ 398 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEEecCCcccccccccccHHHHHHHHHHHH-HCCeEEecCC
Confidence 566777778888777777653 3322233345567776643110 000000000012356778765 7899998862
Q ss_pred CcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 86 AFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
.+++|+++..+++++++++++|.+++++
T Consensus 399 -----------~~~~r~~~~~t~e~i~~~l~~l~~~l~~ 426 (429)
T 3k28_A 399 -----------FEGLFLSTVHSDADIEATIAAAEIAMSK 426 (429)
T ss_dssp -----------TSCBCCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred -----------CCCEEEECCCCHHHHHHHHHHHHHHHHH
Confidence 2457888888999999999999988763
No 181
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=97.46 E-value=0.00066 Score=51.24 Aligned_cols=109 Identities=10% Similarity=-0.067 Sum_probs=68.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-CCccc---CCCcceEEEEeeCCcccccccCC---CCCchhhHHHHHHHHHhCCee
Q psy788 8 CYFYTISEELRPKREILADALDKA-GMVPV---IPDGGYFMVADWTQLRPMLRLDT---ESDKYEDFKFAKWMTKNVKLQ 80 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~---~p~gg~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~gV~ 80 (126)
..++.+.+...+.++.+.+.|.+. ++++. .|.++++++...+......+... ........++.+.|. +.|+.
T Consensus 382 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~G~~ 460 (504)
T 2okj_A 382 VGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMM-ESGTT 460 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHH-HHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHH-hCCcE
Confidence 456777888888899999999887 77765 48889888765543100000000 000001346777765 66765
Q ss_pred EeCCCCcccCcccCCCCCeEEEEee---CChhHHHHHHHHHHHhhh
Q psy788 81 GIPPSAFYSDEHKHLGENLIRYCFF---KKDETLREASSILQTWRN 123 (126)
Q Consensus 81 v~pg~~f~~~~~~~~~~~~~Rl~~~---~~~e~i~~~~~~l~~~~~ 123 (126)
++++..+.. ..+++|++++ .+.++++..++.|.++.+
T Consensus 461 ~~~~~~~~~------~~~~lRis~~~~~~t~edi~~~~~~l~~~~~ 500 (504)
T 2okj_A 461 MVGYQPQGD------KANFFRMVISNPAATQSDIDFLIEEIERLGQ 500 (504)
T ss_dssp EEEEEEETT------EEEEEEECCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEeeEECC------ceEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 544333321 1368999997 378899999999988765
No 182
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=97.40 E-value=0.00086 Score=49.74 Aligned_cols=98 Identities=4% Similarity=-0.168 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHhC----CCcccCCCcceEEEEeeCC-----c--ccccccCCCCCchhhHHHHHHHHHhCCee
Q psy788 12 TISEELRPKREILADALDKA----GMVPVIPDGGYFMVADWTQ-----L--RPMLRLDTESDKYEDFKFAKWMTKNVKLQ 80 (126)
Q Consensus 12 ~~r~~~~~r~~~l~~~l~~~----g~~~~~p~gg~~~~i~~~~-----~--~~~~~~~~~~~~~~~~~~~~~l~~~~gV~ 80 (126)
.+.+.++++++.+.+.|++. ++....+..|.|+|++++. . ...+......+.....+++..|+ ++||.
T Consensus 325 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gv~ 403 (453)
T 2cy8_A 325 DVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALI-LEGVD 403 (453)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHH-HTTEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHH-HCCeE
Confidence 34566667777777776553 4433234456688999874 1 00000000000012457888876 68999
Q ss_pred EeCCCCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 81 GIPPSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 81 v~pg~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
+.|+ +.+|+++..+++++++++++|.++++
T Consensus 404 v~~~-------------~~~~l~~~~t~~~i~~~l~~l~~~l~ 433 (453)
T 2cy8_A 404 IGGR-------------GSVFLSAQHEREHVEHLVTTFDRVLD 433 (453)
T ss_dssp CBTT-------------TEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred EeCC-------------CCEEeeccCCHHHHHHHHHHHHHHHH
Confidence 8542 12678877799999999999988765
No 183
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=97.38 E-value=0.0017 Score=48.47 Aligned_cols=96 Identities=11% Similarity=0.120 Sum_probs=65.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCe---
Q psy788 7 KCYFYTISEELRPKREILADALDKA----GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKL--- 79 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~----g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV--- 79 (126)
..+++.+++.+.+.++.+.+.|.+. |+.+..|+ + ++++.+.... ...+++..|. +.||
T Consensus 345 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~~-~-~v~~~~~~~~------------~~~~l~~~L~-~~gi~~~ 409 (456)
T 2z67_A 345 SKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVE-S-PIASCISVNS------------DPVEIAAKLY-NLRVTGP 409 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCCC-C-SSEEEEECSS------------CHHHHHHHHH-HTTEESC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecCCC-C-eEEEEEeccc------------HHHHHHHHHH-HcCCCcc
Confidence 3567888999999999999999886 77777777 5 4455662100 1346777765 6664
Q ss_pred eEe------CCCCcccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhh
Q psy788 80 QGI------PPSAFYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWR 122 (126)
Q Consensus 80 ~v~------pg~~f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~ 122 (126)
.+. +|..+... ..+++|++++. +.+++++.+++|.+++
T Consensus 410 rv~~~~g~f~G~~~~~~-----~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 410 RGIKKTDHFGNCYLGTY-----THDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp EEECTTCHHHHTCSSCC-----SCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred eEEeecCcccccccccc-----CcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 454 23333221 24799999983 8899999999998765
No 184
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=97.27 E-value=0.0017 Score=48.54 Aligned_cols=85 Identities=13% Similarity=-0.029 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHHHhC----CCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcc
Q psy788 13 ISEELRPKREILADALDKA----GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFY 88 (126)
Q Consensus 13 ~r~~~~~r~~~l~~~l~~~----g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~ 88 (126)
+.+.++++++.+.+.|.++ ++....+. |+|+|++++... +..++++.|+ ++||.+.|.
T Consensus 361 ~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~-G~~~~i~l~~~~------------~~~~~~~~l~-~~Gv~v~~~---- 422 (457)
T 3tfu_A 361 WRTRITELAAGLTAGLDTARALPAVTDVRVC-GAIGVIECDRPV------------DLAVATPAAL-DRGVWLRPF---- 422 (457)
T ss_dssp HHHHHHHHHHHHHHHHGGGGGSTTEEEEEEC-SSCEEEEESSCC------------CHHHHHHHHH-HTTEECCCB----
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeeeeecC-CeEEEEEECCcc------------cHHHHHHHHH-HCCeEEEec----
Confidence 4556666677777777654 22223334 568888887531 3567888875 779999872
Q ss_pred cCcccCCCCCeEEEEee--CChhHHHHHHHHHHHhhh
Q psy788 89 SDEHKHLGENLIRYCFF--KKDETLREASSILQTWRN 123 (126)
Q Consensus 89 ~~~~~~~~~~~~Rl~~~--~~~e~i~~~~~~l~~~~~ 123 (126)
.+++|++.. .+++++++++++|.++++
T Consensus 423 --------~~~lRi~p~~~~t~eei~~~l~~L~~~l~ 451 (457)
T 3tfu_A 423 --------RNLVYAMPPYICTPAEITQITSAMVEVAR 451 (457)
T ss_dssp --------TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred --------CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 257999854 488999999999998876
No 185
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=97.25 E-value=0.0029 Score=46.28 Aligned_cols=105 Identities=12% Similarity=0.030 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCc-ceEEE----EeeCCcc-cccccCCCCCchhhHHHHHHHHHhC-Ce
Q psy788 9 YFYTISEELRPKREILADALDKA-GMVPV-IPDG-GYFMV----ADWTQLR-PMLRLDTESDKYEDFKFAKWMTKNV-KL 79 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~-g~~~~-~p~g-g~~~~----i~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~-gV 79 (126)
+++.+.+..++.++.+.+.|.++ ++++. .|++ +.+.| +.++... ... +..++.+.|. ++ ||
T Consensus 264 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~L~-~~~gI 333 (418)
T 2c81_A 264 ELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKFGGL---------NADQFCEILR-EKLNM 333 (418)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGGTTTC---------CHHHHHHHHH-HHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEcccccccc---------CHHHHHHHHH-HcCCC
Confidence 45556666666777788888776 67765 5676 44433 6666310 001 3667888875 66 99
Q ss_pred e---EeCCCCcccCccc----------------------CCC-------CCeEEEEee--C-ChhHHHHHHHHHHHhhh
Q psy788 80 Q---GIPPSAFYSDEHK----------------------HLG-------ENLIRYCFF--K-KDETLREASSILQTWRN 123 (126)
Q Consensus 80 ~---v~pg~~f~~~~~~----------------------~~~-------~~~~Rl~~~--~-~~e~i~~~~~~l~~~~~ 123 (126)
. +.+|......... ... .+.+|+++. . ++++++..++.|.++++
T Consensus 334 ~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~ 412 (418)
T 2c81_A 334 GTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELAR 412 (418)
T ss_dssp CTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHH
T ss_pred CcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHH
Confidence 9 8887521100000 000 258999996 3 67888998888887765
No 186
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=97.23 E-value=0.0028 Score=47.03 Aligned_cols=101 Identities=6% Similarity=-0.140 Sum_probs=64.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-CCcccC-----CCcceEEEEeeCCccc-ccccCCCCCchhhHHHHHHHHHhCCee
Q psy788 8 CYFYTISEELRPKREILADALDKA-GMVPVI-----PDGGYFMVADWTQLRP-MLRLDTESDKYEDFKFAKWMTKNVKLQ 80 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~-----p~gg~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~gV~ 80 (126)
+.++++.+.+.++++.+.+.|.++ ++.+.. |.+++ +.+.++.... .+ +..++.+.|. +.|+.
T Consensus 323 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~-v~f~~~~~~~~~~---------~~~~l~~~L~-~~Gi~ 391 (452)
T 2dgk_A 323 EGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPA-VCFKLKDGEDPGY---------TLYDLSERLR-LRGWQ 391 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSE-EEEEECTTCCCSC---------CHHHHHHHHH-HTTCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEE-EEEEecCcccccC---------CHHHHHHHHH-hcCCe
Confidence 456788889999999999999987 577653 34554 4445543100 01 2467888864 77886
Q ss_pred EeCCCCcccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 81 GIPPSAFYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 81 v~pg~~f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
+......... .+.+++|++++. +.++++..++.|.++++
T Consensus 392 v~~~~~~~~~----~~~~~lRis~~~~~t~e~id~li~~l~~~~~ 432 (452)
T 2dgk_A 392 VPAFTLGGEA----TDIVVMRIMCRRGFEMDFAELLLEDYKASLK 432 (452)
T ss_dssp CCEEECSTTC----TTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred eeeeeCCccc----CCeEEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 5431111110 135689999985 57788888887776543
No 187
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=97.20 E-value=0.002 Score=48.43 Aligned_cols=97 Identities=16% Similarity=0.098 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHhC-C---CcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 12 TISEELRPKREILADALDKA-G---MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 12 ~~r~~~~~r~~~l~~~l~~~-g---~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
.+.+.++++.+.+.+.|+++ . +....+.|. |+++++...... ..+..........+++.|+ +.||.+.|.
T Consensus 350 ~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G~-~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~--- 423 (476)
T 3i5t_A 350 GIVDQAREMADYFAAALASLRDLPGVAETRSVGL-VGCVQCLLDPTR-ADGTAEDKAFTLKIDERCF-ELGLIVRPL--- 423 (476)
T ss_dssp THHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETT-EEEEEECCC------CCHHHHHHHHHHHHHHH-HTTEECEEE---
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc-eeEEEEecCccc-cccccchhHHHHHHHHHHH-HCCCEEEec---
Confidence 34566666777777777654 1 223344444 667777542100 0000000001346777765 779999881
Q ss_pred ccCcccCCCCCeEEEE--eeCChhHHHHHHHHHHHhhh
Q psy788 88 YSDEHKHLGENLIRYC--FFKKDETLREASSILQTWRN 123 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~--~~~~~e~i~~~~~~l~~~~~ 123 (126)
+ +++||+ ++.+++++++++++|.++++
T Consensus 424 --------g-~~iRi~p~l~~t~e~i~~~l~~l~~~l~ 452 (476)
T 3i5t_A 424 --------G-DLCVISPPLIISRAQIDEMVAIMRQAIT 452 (476)
T ss_dssp --------T-TEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred --------C-CEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 2 689999 66699999999999998875
No 188
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=97.17 E-value=0.0031 Score=46.98 Aligned_cols=90 Identities=13% Similarity=0.059 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHhC-CCc-ccCCC----------------cceEEEEeeCCcccccccCCCCCchhhHHHHHHHHH
Q psy788 14 SEELRPKREILADALDKA-GMV-PVIPD----------------GGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTK 75 (126)
Q Consensus 14 r~~~~~r~~~l~~~l~~~-g~~-~~~p~----------------gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 75 (126)
.++..++...+.+.|+++ ++. +..|. |||.+|++++.. . +...|.+.+ +
T Consensus 302 ~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~----~--------~~~~~~~~l-~ 368 (430)
T 3ri6_A 302 IERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESK----E--------ASYRFMDAL-K 368 (430)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSH----H--------HHHHHHHHC-S
T ss_pred HHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCH----H--------HHHHHHHhC-C
Confidence 344566677888888876 444 44444 888999999832 1 355777764 4
Q ss_pred hCCeeEeCCCCcccCc----------------ccCCCCCeEEEEeeC-ChhHHHHHHH
Q psy788 76 NVKLQGIPPSAFYSDE----------------HKHLGENLIRYCFFK-KDETLREASS 116 (126)
Q Consensus 76 ~~gV~v~pg~~f~~~~----------------~~~~~~~~~Rl~~~~-~~e~i~~~~~ 116 (126)
-.++.+.+|..|..-. .....++++|||++. +.+++.+.++
T Consensus 369 ~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~~~dl~~dl~ 426 (430)
T 3ri6_A 369 LIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEEIEDLKEDIL 426 (430)
T ss_dssp SSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCSSCHHHHHHHHH
T ss_pred cceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHH
Confidence 6677888888776200 001247899999997 5555554443
No 189
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=97.17 E-value=0.0015 Score=47.67 Aligned_cols=103 Identities=4% Similarity=-0.045 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 9 YFYTISEELRPKREILADALDKA-GMVPV-IPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~-g~~~~-~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
+++.+.+..++..+.+.+.|.++ ++.+. .|+++.++|+.++... . +..++.+.| .++||.+.++..
T Consensus 272 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~---~--------~~~~l~~~L-~~~gI~v~~~~~ 339 (399)
T 2oga_A 272 HLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRT---E--------RRDELRSHL-DARGIDTLTHYP 339 (399)
T ss_dssp THHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEEC---S--------SHHHHHHHH-HHTTBCCBCSCS
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEEC---C--------CHHHHHHHH-HHCCCceecCCC
Confidence 34445555555666677777766 66653 4667777775554211 1 356788886 478999988532
Q ss_pred cccC--------c-ccCC-------CCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 87 FYSD--------E-HKHL-------GENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 87 f~~~--------~-~~~~-------~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
.... + .... ..+++|+++.. ++++++..++.|.++++
T Consensus 340 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 394 (399)
T 2oga_A 340 VPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAE 394 (399)
T ss_dssp SCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHH
T ss_pred CccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHH
Confidence 1000 0 0000 02689999974 88899999999988765
No 190
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=97.15 E-value=0.001 Score=48.13 Aligned_cols=103 Identities=7% Similarity=-0.065 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCC------Ccc-eEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeE
Q psy788 9 YFYTISEELRPKREILADALDKAGMVPVIP------DGG-YFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQG 81 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p------~gg-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v 81 (126)
+++++.+..++..+.+.+.|.+.++.+..+ .++ +.+++.++... .. +..++.+.| .++||.+
T Consensus 266 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~---------~~~~l~~~L-~~~GI~v 334 (391)
T 3dr4_A 266 RVDEHLAARERVVGWYEQKLARLGNRVTKPHVALTGRHVFWMYTVRLGEGL-ST---------TRDQVIKDL-DALGIES 334 (391)
T ss_dssp THHHHHHHHHHHHHHHHHHHGGGTTSEECCCCCTTSCCCCSSEEEEECSSC-SS---------CHHHHHHHH-HHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCccccCcCCCCCCcceeEEEEEEECCcc-ch---------hHHHHHHHH-HHCCCce
Confidence 456667777777778888887766665433 223 34577776410 01 366788886 4789999
Q ss_pred eCCCCcccCcc-------------cCCCCCeEEEEeeC--ChhHHHHHHHHHHHhh
Q psy788 82 IPPSAFYSDEH-------------KHLGENLIRYCFFK--KDETLREASSILQTWR 122 (126)
Q Consensus 82 ~pg~~f~~~~~-------------~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~ 122 (126)
.||........ .....+.+|+++.. ++++++..++.|.+++
T Consensus 335 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 335 RPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp EECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred eecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 98852110000 00024678999885 8889999999888764
No 191
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=97.01 E-value=0.0093 Score=45.13 Aligned_cols=98 Identities=8% Similarity=0.038 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CcccCC--CcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCC
Q psy788 10 FYTISEELRPKREILADALDKAG-MVPVIP--DGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~g-~~~~~p--~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
+..+.+...++.+.+.+.|.+++ +.+..| ..+ ++.++++... .+ +..++++.| .+.|+.+.....
T Consensus 340 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~-~v~f~~~~~~-~~---------~~~~l~~~L-~~~Gi~v~~~~~ 407 (502)
T 3hbx_A 340 YRNVMENCRENMIVLREGLEKTERFNIVSKDEGVP-LVAFSLKDSS-CH---------TEFEISDML-RRYGWIVPAYTM 407 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSS-EEEEEESSCS-SC---------CHHHHHHHH-HTTTCBCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCce-EEEEEecCCC-cC---------CHHHHHHHH-HhCCcEEeeccC
Confidence 45666777777788999998884 777554 555 5556665421 01 345788886 588998743222
Q ss_pred cccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 87 FYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
.... .+..++|++++. +.++++..++.|.++++
T Consensus 408 p~~~----~~~~~lRisv~~~~t~edid~li~~L~~~l~ 442 (502)
T 3hbx_A 408 PPNA----QHITVLRVVIREDFSRTLAERLVIDIEKVMR 442 (502)
T ss_dssp CTTC----TTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred Cccc----CCceEEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 2111 135789999984 67788888877776654
No 192
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=96.88 E-value=0.0088 Score=43.84 Aligned_cols=103 Identities=11% Similarity=0.076 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCcccC-CCcc---eEEE-EeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe
Q psy788 9 YFYTISEELRPKREILADALDKA-GMVPVI-PDGG---YFMV-ADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI 82 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~-p~gg---~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~ 82 (126)
+++.++++.++.++.+.+.|.++ ++.+.. |+|+ +++| +.++...... +..++.+.| .+.||.+.
T Consensus 258 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------~~~~l~~~L-~~~gI~v~ 327 (424)
T 2po3_A 258 AFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGI---------HRDLVMEVL-KAEGVHTR 327 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSS---------CHHHHHHHH-HHTTEECB
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccchh---------hHHHHHHHH-HHCCCcee
Confidence 44555555666666677777665 666654 5555 3444 7776310001 356777775 58899998
Q ss_pred CCCCcccC-cccC--------CCC-------CeEEEEee--CChhHHHHHHHHHHHhhh
Q psy788 83 PPSAFYSD-EHKH--------LGE-------NLIRYCFF--KKDETLREASSILQTWRN 123 (126)
Q Consensus 83 pg~~f~~~-~~~~--------~~~-------~~~Rl~~~--~~~e~i~~~~~~l~~~~~ 123 (126)
| .|... .... ..+ +.+|+++. .++++++..++.|.++++
T Consensus 328 ~--~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~ 384 (424)
T 2po3_A 328 A--YFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCAT 384 (424)
T ss_dssp C--TTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHH
T ss_pred c--ccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHh
Confidence 8 23211 0000 001 22677633 388899999999987765
No 193
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=96.83 E-value=0.0024 Score=47.60 Aligned_cols=78 Identities=15% Similarity=0.232 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEe-CCCCcccCcccCCCC
Q psy788 19 PKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGI-PPSAFYSDEHKHLGE 97 (126)
Q Consensus 19 ~r~~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~-pg~~f~~~~~~~~~~ 97 (126)
+++..+.+.+.+.|+++..|+++.++|+.++. . +..++++.|. ++||.+. + +.
T Consensus 271 ~~~~~l~~~l~~~g~~~~~~~~~~~l~i~~~~----~---------~~~~l~~~L~-~~GI~v~~~------------g~ 324 (446)
T 2x3l_A 271 AKRAQLIECLENKGFEMLQVDDPLKLLIKYEG----F---------TGHDIQNWFM-NAHIYLELA------------DD 324 (446)
T ss_dssp HHHHHHHHHHHHHTCEEEECSSTTEEEEECTT----S---------CHHHHHHHHH-HTTEEESEE------------CS
T ss_pred HHHHHHHHHHHHcCCEECcCCCCeEEEEEeCC----c---------CHHHHHHHHH-HCCCEEEec------------CC
Confidence 33334444444337777666666789999873 1 3667888875 5699985 3 23
Q ss_pred CeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 98 NLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 98 ~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
+++|++++. +++++ ..++.|.++++
T Consensus 325 ~~iRi~~~~~~t~e~i-~l~~aL~~~~~ 351 (446)
T 2x3l_A 325 YQALAILPLWHHDDTY-LFDSLLRKIED 351 (446)
T ss_dssp SCEEEECCCCCTTCCC-CHHHHHHHHHT
T ss_pred CEEEEEeecCCCHHHH-HHHHHHHHHHH
Confidence 679999985 67778 88888877654
No 194
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=96.81 E-value=0.014 Score=41.75 Aligned_cols=104 Identities=11% Similarity=0.075 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-C-Cccc-CCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 9 YFYTISEELRPKREILADALDKA-G-MVPV-IPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~-g-~~~~-~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
.++.+.+..++..+.+.+.|.+. + +.+. .++++...|..+.-.. . +..++.+.| .++||.+.|+.
T Consensus 246 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--------~~~~l~~~L-~~~gi~v~~~~ 313 (374)
T 3uwc_A 246 QLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRV---K--------YRDQLFQYL-KDNGIEVKIHY 313 (374)
T ss_dssp GHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEE---T--------THHHHHHHH-HHTTBCCBCSC
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEc---C--------CHHHHHHHH-HHCCCccccCC
Confidence 35566666777777777777766 3 5542 3444444443332110 1 356788876 57899999985
Q ss_pred CcccCccc----------------CCCCCeEEEEeeC--ChhHHHHHHHHHHHhhhc
Q psy788 86 AFYSDEHK----------------HLGENLIRYCFFK--KDETLREASSILQTWRNK 124 (126)
Q Consensus 86 ~f~~~~~~----------------~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~~ 124 (126)
.......+ ....+.+|+++.. ++++++..++.|.+++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 314 PIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp SSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHh
Confidence 21110000 0012789998884 889999999999988764
No 195
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=96.76 E-value=0.0046 Score=46.46 Aligned_cols=96 Identities=10% Similarity=0.006 Sum_probs=57.0
Q ss_pred HHHHHH-HHHHHHHHHHHhC---C-CcccCCCcceEEEEeeCCcccccccCCCCC-chhhHHHHHHHHHhCCeeEeCCCC
Q psy788 13 ISEELR-PKREILADALDKA---G-MVPVIPDGGYFMVADWTQLRPMLRLDTESD-KYEDFKFAKWMTKNVKLQGIPPSA 86 (126)
Q Consensus 13 ~r~~~~-~r~~~l~~~l~~~---g-~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gV~v~pg~~ 86 (126)
+.+.++ ++.+.+.+.|+++ + +....+.|. |+++++...... ..+.... .....++++.|+ ++||.+.|+
T Consensus 347 ~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~-~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-- 421 (472)
T 3hmu_A 347 ILDHVRNVAAPYLKEKWEALTDHPLVGEAKIVGM-MASIALTPNKAS-RAKFASEPGTIGYICRERCF-ANNLIMRHV-- 421 (472)
T ss_dssp HHHHHHHTHHHHHHHHHHGGGGSTTEEEEEEETT-EEEEEECSCGGG-TCCBSSCTTHHHHHHHHHHH-HTTBCCEEE--
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc-eEEEEEecCccc-cccccchhHHHHHHHHHHHH-HCCcEEEec--
Confidence 445555 5666666666544 2 333445555 666776532100 0000000 001456778765 789998874
Q ss_pred cccCcccCCCCCeEEEE--eeCChhHHHHHHHHHHHhhh
Q psy788 87 FYSDEHKHLGENLIRYC--FFKKDETLREASSILQTWRN 123 (126)
Q Consensus 87 f~~~~~~~~~~~~~Rl~--~~~~~e~i~~~~~~l~~~~~ 123 (126)
+ +++||+ +..+++++++++++|.++++
T Consensus 422 ---------g-~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 450 (472)
T 3hmu_A 422 ---------G-DRMIISPPLVITPAEIDEMFVRIRKSLD 450 (472)
T ss_dssp ---------T-TEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ---------C-CEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 1 589999 55689999999999988775
No 196
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=96.62 E-value=0.015 Score=43.05 Aligned_cols=98 Identities=13% Similarity=0.100 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCC----------------cceEEEEeeCCccc-ccccCCCCCchhhHHH
Q psy788 9 YFYTISEELRPKREILADALDKA-GMV-PVIPD----------------GGYFMVADWTQLRP-MLRLDTESDKYEDFKF 69 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~-g~~-~~~p~----------------gg~~~~i~~~~~~~-~~~~~~~~~~~~~~~~ 69 (126)
++....+...+++..+.+.|+++ ++. +..|. +|.++|++++.... ..+ ....|
T Consensus 276 ~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~--------~~~~~ 347 (414)
T 3ndn_A 276 TLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQ--------RAFEV 347 (414)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHH--------HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHH--------HHHHH
Confidence 44555566778888899999876 332 22222 57799999975200 000 24567
Q ss_pred HHHHHHhCCeeEeCCCCcccCcc----------------cCCCCCeEEEEeeC-ChhHHHHHH
Q psy788 70 AKWMTKNVKLQGIPPSAFYSDEH----------------KHLGENLIRYCFFK-KDETLREAS 115 (126)
Q Consensus 70 ~~~l~~~~gV~v~pg~~f~~~~~----------------~~~~~~~~Rl~~~~-~~e~i~~~~ 115 (126)
...| +..++.+.+|..+..-.. ....++++|||++. +.+++.+.+
T Consensus 348 ~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~e~~~dli~dl 409 (414)
T 3ndn_A 348 LDKM-RLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGLEDTDDLIADI 409 (414)
T ss_dssp HHHC-SSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCSSCHHHHHHHH
T ss_pred HHhC-ccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHH
Confidence 7764 567788888876643100 01246899999998 444444433
No 197
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=96.57 E-value=0.033 Score=40.87 Aligned_cols=98 Identities=8% Similarity=0.100 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCcccC--C--CcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 10 FYTISEELRPKREILADALDKA-GMVPVI--P--DGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~-g~~~~~--p--~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
++.+.++.++..+++.+.|++. |+.+.. + .++.-+-+.++......+ -+..+...+ .+.||.+.+|
T Consensus 271 ~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~--------~~~~~l~~l-~~~Gi~~~~g 341 (377)
T 3e77_A 271 AAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDA--------LEKRFLDKA-LELNMLSLKG 341 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCCHH--------HHHHHHHHH-HHTTEESCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCchh--------HHHHHHHHH-HHCCcEEeCC
Confidence 6677888888889999999887 666422 1 234445556664200000 123566665 4789999887
Q ss_pred CCcccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhhcC
Q psy788 85 SAFYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWRNKN 125 (126)
Q Consensus 85 ~~f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~~~ 125 (126)
.. ..+.+|+|+.. +.++++..++.|.++.++|
T Consensus 342 ~~---------~~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 342 HR---------SVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp CT---------TTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CC---------cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 41 13459999985 8899999999999988765
No 198
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=96.46 E-value=0.00063 Score=51.22 Aligned_cols=56 Identities=16% Similarity=-0.008 Sum_probs=37.3
Q ss_pred hHHHHHHHHHhCCeeEeCCC------------CcccCc----ccCCCCCeEEEEeeCChhHHHHHHHHHHHhhhc
Q psy788 66 DFKFAKWMTKNVKLQGIPPS------------AFYSDE----HKHLGENLIRYCFFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 66 ~~~~~~~l~~~~gV~v~pg~------------~f~~~~----~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~~ 124 (126)
...|.+.| ...||.+.+|. .+.... .....++++|++++. |++++.+++|.+++++
T Consensus 390 ~~~~~~~L-~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~--edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 390 SKHLVETT-KYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI--EDVDDLISDLDIAFKT 461 (464)
T ss_dssp HHHHHHHC-SSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS--SCHHHHHHHHHHHHHS
T ss_pred HHHHHHhc-CcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC--CCHHHHHHHHHHHHhh
Confidence 34577775 46899998886 122110 000125799999999 7789999999887753
No 199
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=96.42 E-value=0.025 Score=42.91 Aligned_cols=106 Identities=12% Similarity=-0.015 Sum_probs=65.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC-CCccc---CCCcceEEEEeeCCcccccccCCCC-C-----chhhHHHHHHHHHh
Q psy788 7 KCYFYTISEELRPKREILADALDKA-GMVPV---IPDGGYFMVADWTQLRPMLRLDTES-D-----KYEDFKFAKWMTKN 76 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~---~p~gg~~~~i~~~~~~~~~~~~~~~-~-----~~~~~~~~~~l~~~ 76 (126)
..+++.+.++..++.+++.+.|++. |+++. .|..++.+|.-.+... +..... . .....++.+.|. +
T Consensus 384 ~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~---~~~~~~~~~~~~l~~~~~~l~~~L~-~ 459 (511)
T 3vp6_A 384 TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSL---RGVPDSPQRREKLHKVAPKIKALMM-E 459 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGG---SSCCCCHHHHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccc---cccccchhHHHHHHHHHHHHHHHHH-h
Confidence 4577888889999999999999887 77764 4778876654444321 100000 0 001235777765 5
Q ss_pred CCeeEeCCCCcccCcccCCCCCeEEEEeeC---ChhHHHHHHHHHHHhh
Q psy788 77 VKLQGIPPSAFYSDEHKHLGENLIRYCFFK---KDETLREASSILQTWR 122 (126)
Q Consensus 77 ~gV~v~pg~~f~~~~~~~~~~~~~Rl~~~~---~~e~i~~~~~~l~~~~ 122 (126)
+|+.++. ..+... +.+++|+++++ +.++++..++.|.++-
T Consensus 460 ~G~~~~~-~~~~~~-----~~~~lRi~~~~~~~t~~di~~ll~~i~~~~ 502 (511)
T 3vp6_A 460 SGTTMVG-YQPQGD-----KANFFRMVISNPAATQSDIDFLIEEIERLG 502 (511)
T ss_dssp HTSCEEE-EEEETT-----EEEEEEECCCCTTCCHHHHHHHHHHHHHHH
T ss_pred cCCEEEE-EEEeCC-----ceEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 5765544 222211 24689999952 6788888888877653
No 200
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=96.25 E-value=0.085 Score=38.76 Aligned_cols=94 Identities=12% Similarity=0.132 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCC-cc-cCC--CcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCC
Q psy788 10 FYTISEELRPKREILADALDKAGM-VP-VIP--DGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPS 85 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~g~-~~-~~p--~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 85 (126)
++.+.++.++..+.+.+.|++.++ .. ..+ .+...+-+.++... + +.++...| .+.||.+.+|.
T Consensus 286 ~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~--~----------~~~~~~~L-~~~gI~~~~g~ 352 (386)
T 3qm2_A 286 VAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNT--L----------DKVFLEES-FAAGLHALKGH 352 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGG--G----------HHHHHHHH-HHTTEECCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCcc--c----------cHHHHHHH-HHCCCEEeCCC
Confidence 566777888888888888887654 21 112 23335555665321 1 35666664 68899987763
Q ss_pred CcccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhhcC
Q psy788 86 AFYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWRNKN 125 (126)
Q Consensus 86 ~f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~~~ 125 (126)
.- .+.+|+|+.. +.++++..++.|.++.++|
T Consensus 353 ~~---------~~~iRiS~~~~~t~edId~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 353 RV---------VGGMRASIYNAMPIEGVKALTDFMIDFERRH 385 (386)
T ss_dssp TT---------TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CC---------cCeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 21 2349999985 7899999999999888764
No 201
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=96.07 E-value=0.13 Score=37.48 Aligned_cols=94 Identities=12% Similarity=0.137 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC-C-ccc-CC--CcceEEEEeeCC-cccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 10 FYTISEELRPKREILADALDKAG-M-VPV-IP--DGGYFMVADWTQ-LRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~g-~-~~~-~p--~gg~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
++.+.++.++..+++.+.|++.+ + .+. .+ .+...+-+.++. .. + +.++...| .++||.+.+
T Consensus 259 ~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~--~----------~~~~~~~L-~~~gI~~~~ 325 (361)
T 3m5u_A 259 LDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKD--L----------EPLFVKEA-EEAGMIGLK 325 (361)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCTT--H----------HHHHHHHH-HHTTEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCchh--h----------hHHHHHHH-HHCCCEEec
Confidence 66778888888899999998874 5 332 22 123344455553 11 1 24677664 688999887
Q ss_pred CCCcccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhhhcC
Q psy788 84 PSAFYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWRNKN 125 (126)
Q Consensus 84 g~~f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~~~ 125 (126)
|.. . .+.+|+|+.. +.++++..++.|.++.++|
T Consensus 326 g~~--~-------~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 360 (361)
T 3m5u_A 326 GHR--I-------LGGIRASIYNALNLDQVKTLCEFMKEFQGKY 360 (361)
T ss_dssp CCT--T-------TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCC--c-------cCeEEEEccCCCCHHHHHHHHHHHHHHHHhc
Confidence 642 1 2459999985 8899999999999888764
No 202
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=96.02 E-value=0.028 Score=40.84 Aligned_cols=38 Identities=11% Similarity=-0.067 Sum_probs=22.3
Q ss_pred HHHHHHHHhCCeeEeCCCCcccC-----------c-----ccCCCCCeEEEEeeC
Q psy788 68 KFAKWMTKNVKLQGIPPSAFYSD-----------E-----HKHLGENLIRYCFFK 106 (126)
Q Consensus 68 ~~~~~l~~~~gV~v~pg~~f~~~-----------~-----~~~~~~~~~Rl~~~~ 106 (126)
.+...+ ...|+.+.+|+.|..- . .....++++|+|++.
T Consensus 326 ~l~~~~-~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~ 379 (398)
T 2rfv_A 326 RMINSV-ELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGL 379 (398)
T ss_dssp HHHTTC-SSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCS
T ss_pred HHHHhC-CcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecC
Confidence 444442 3458889999876310 0 000126899999997
No 203
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=95.87 E-value=0.061 Score=38.98 Aligned_cols=114 Identities=11% Similarity=-0.094 Sum_probs=65.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC----cce-EEEEeeCCccc------cc---ccCCCCCchhhHHHHHHH
Q psy788 8 CYFYTISEELRPKREILADALDKAGMVPVIPD----GGY-FMVADWTQLRP------ML---RLDTESDKYEDFKFAKWM 73 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~g~~~~~p~----gg~-~~~i~~~~~~~------~~---~~~~~~~~~~~~~~~~~l 73 (126)
+++++.++.++++++.+.+.|.+. +++..+. +++ .+++.++.... .+ +..+.....+..++.+.|
T Consensus 243 ~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 321 (394)
T 1o69_A 243 EVLEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDL 321 (394)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHH
Confidence 567788889999999999999876 5544332 454 46777763100 00 000000001355788886
Q ss_pred HHhCCeeEeCCCCcccCcccCCC-------------CCeEEEEee-C-ChhHHHHHHHHHHHhhh
Q psy788 74 TKNVKLQGIPPSAFYSDEHKHLG-------------ENLIRYCFF-K-KDETLREASSILQTWRN 123 (126)
Q Consensus 74 ~~~~gV~v~pg~~f~~~~~~~~~-------------~~~~Rl~~~-~-~~e~i~~~~~~l~~~~~ 123 (126)
.+.||.+.||+........... .+.+|+... . ++++++..++.|.++++
T Consensus 322 -~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 322 -KNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK 385 (394)
T ss_dssp -HHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred -HHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence 5789999998532110000000 033444444 3 78899999999988765
No 204
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=95.61 E-value=0.18 Score=37.00 Aligned_cols=60 Identities=10% Similarity=0.050 Sum_probs=40.9
Q ss_pred hHHHHHHHHHhCCeeEeCCCCcccCccc-C---------C-------CCCeEEEEeeC--ChhHHHHHHHHHHHhhhcCC
Q psy788 66 DFKFAKWMTKNVKLQGIPPSAFYSDEHK-H---------L-------GENLIRYCFFK--KDETLREASSILQTWRNKNI 126 (126)
Q Consensus 66 ~~~~~~~l~~~~gV~v~pg~~f~~~~~~-~---------~-------~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~~~~ 126 (126)
..++...| .++||.+.+++.......+ . . ..+.+|+++.. ++++++..++.|.+++++|.
T Consensus 359 ~~~l~~~L-~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~~~~ 437 (437)
T 3bb8_A 359 RIDLVKFL-DEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFGLNF 437 (437)
T ss_dssp HHHHHHHH-HHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHH-HHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHcccC
Confidence 56788886 5789999987642110000 0 0 02358999885 88999999999999888773
No 205
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=95.59 E-value=0.07 Score=38.44 Aligned_cols=100 Identities=7% Similarity=-0.049 Sum_probs=60.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC--Ccce-EEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeC
Q psy788 8 CYFYTISEELRPKREILADALDKA-GMVPVIP--DGGY-FMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIP 83 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~~p--~gg~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 83 (126)
++++...+..++.++.+.+.|.++ ++.+..+ .+++ .+++.++... .. +..++.+.| .++||.+.+
T Consensus 266 ~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~---------~~~~l~~~L-~~~gI~v~~ 334 (390)
T 3b8x_A 266 KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDS-GV---------IRKQLVENL-NSAGIECRP 334 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTS-CC---------CHHHHHHHH-HHTTBCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcC-cc---------cHHHHHHHH-HHCCCCeee
Confidence 456677777888888888899876 6665443 3444 3667776310 01 256788886 578999887
Q ss_pred ---CCCccc-Cc-c--cC----C-------CCCeEEEEeeC--ChhHHHHHHHHH
Q psy788 84 ---PSAFYS-DE-H--KH----L-------GENLIRYCFFK--KDETLREASSIL 118 (126)
Q Consensus 84 ---g~~f~~-~~-~--~~----~-------~~~~~Rl~~~~--~~e~i~~~~~~l 118 (126)
|+.... .. . .. . ..+.+||++.. ++++++..++.|
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 335 IVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp STTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred ecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 332111 00 0 00 0 12469999985 777877776654
No 206
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=95.45 E-value=0.078 Score=40.03 Aligned_cols=107 Identities=11% Similarity=-0.079 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCcceEEEEeeCCcccccccCCCCCchh-----hHHHHHHHHHhCCee
Q psy788 8 CYFYTISEELRPKREILADALDKA-GMVPV-IPDGGYFMVADWTQLRPMLRLDTESDKYE-----DFKFAKWMTKNVKLQ 80 (126)
Q Consensus 8 ~~l~~~r~~~~~r~~~l~~~l~~~-g~~~~-~p~gg~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~gV~ 80 (126)
..++++.+...+..+.+.+.|.+. ++++. +|..+.+++...+....... +..+... ...+...+. +.|+.
T Consensus 397 ~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~--~~~~~~~~l~~~~~~l~~~l~-~~G~~ 473 (515)
T 2jis_A 397 QGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQ--ESPDYHERLSKVAPVLKERMV-KEGSM 473 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCT--TSTTHHHHHHTHHHHHHHHHH-HHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccccc--cchhHHHHHHHHHHHHHHHHH-hcCCE
Confidence 456677888888899999999887 77764 45566665544442100000 0000000 012445543 55654
Q ss_pred EeCCCCcccCcccCCCCCeEEEEee---CChhHHHHHHHHHHHhhh
Q psy788 81 GIPPSAFYSDEHKHLGENLIRYCFF---KKDETLREASSILQTWRN 123 (126)
Q Consensus 81 v~pg~~f~~~~~~~~~~~~~Rl~~~---~~~e~i~~~~~~l~~~~~ 123 (126)
....... . ...+++|++++ .+.++++..++.|.++.+
T Consensus 474 ~~~~~~~--~----~~~~~lRis~~~~~~t~edid~~~~~l~~~~~ 513 (515)
T 2jis_A 474 MIGYQPH--G----TRGNFFRVVVANSALTCADMDFLLNELERLGQ 513 (515)
T ss_dssp EEEEEEE--T----TEEEEEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEE--C----CceEEEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 4221111 1 12478999995 488899999999987764
No 207
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=95.30 E-value=0.24 Score=35.67 Aligned_cols=96 Identities=9% Similarity=0.040 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-Cc-cc-----------------CCCcceEEEEeeCCcccccccCCCCCchhhHHH
Q psy788 9 YFYTISEELRPKREILADALDKAG-MV-PV-----------------IPDGGYFMVADWTQLRPMLRLDTESDKYEDFKF 69 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g-~~-~~-----------------~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 69 (126)
++....+.+.+++..+.+.|.+++ +. +. ...|++ +.+.++. ....+
T Consensus 247 ~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~--------------~~~~~ 311 (386)
T 1cs1_A 247 TLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAM-LSFELDG--------------DEQTL 311 (386)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSE-EEEEESS--------------CHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceE-EEEEECC--------------CHHHH
Confidence 455566677788888888887652 21 10 112554 4455653 13345
Q ss_pred HHHHHHhCCeeEeCCCCcc------------c--Cc------ccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 70 AKWMTKNVKLQGIPPSAFY------------S--DE------HKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 70 ~~~l~~~~gV~v~pg~~f~------------~--~~------~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
... +.+.||.+.++ .|+ . .. .....++++|++++. +..++.+++|.++++
T Consensus 312 ~~~-l~~~gi~~~~~-~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~--~~~~~~i~~l~~al~ 381 (386)
T 1cs1_A 312 RRF-LGGLSLFTLAE-SLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI--EDGEDLIADLENGFR 381 (386)
T ss_dssp HHH-HHTCSSSEEBS-CCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHH
T ss_pred HHH-HHhCCcceEcc-cCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc--CCHHHHHHHHHHHHH
Confidence 555 46889988643 222 0 00 000125899999998 334555666655544
No 208
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=94.14 E-value=0.0036 Score=47.28 Aligned_cols=97 Identities=10% Similarity=0.044 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHhC----CCcccCCCcceEEEEeeCCcc-cccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 13 ISEELRPKREILADALDKA----GMVPVIPDGGYFMVADWTQLR-PMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 13 ~r~~~~~r~~~l~~~l~~~----g~~~~~p~gg~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
+.+.++++.+.+.+.|++. ++....+..|.++|+.+.... .++......+......++..|+ ++||.+.|+. |
T Consensus 357 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~-~ 434 (465)
T 2yky_A 357 AASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHML-RKGIYLAPRG-M 434 (465)
Confidence 4455555555555555543 343445667888999886410 0000000000001346778865 8899999975 3
Q ss_pred ccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 88 YSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
. . ++++.+++++++++++|.++++
T Consensus 435 ~--------~----~s~~~t~edid~~l~~l~~~l~ 458 (465)
T 2yky_A 435 Y--------A----LSLEIADAGRDAFAEALADFIG 458 (465)
Confidence 1 1 6677788889999999987765
No 209
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=95.07 E-value=0.17 Score=37.81 Aligned_cols=100 Identities=12% Similarity=0.016 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC-CC-cccCC----------------CcceEEEEeeCCcccccccCCCCCchhhHHHHH
Q psy788 10 FYTISEELRPKREILADALDKA-GM-VPVIP----------------DGGYFMVADWTQLRPMLRLDTESDKYEDFKFAK 71 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~-g~-~~~~p----------------~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (126)
+....+.+.++...+.+.|.++ ++ .+..| ..|-+++++++... + +...|..
T Consensus 310 l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~---~--------~~~~~l~ 378 (445)
T 1qgn_A 310 LHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDL---L--------TTAKFVD 378 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCH---H--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCH---H--------HHHHHHH
Confidence 3334455667788889999876 34 33333 13447778886420 0 2345555
Q ss_pred HHHHhCCeeEeCCCCcccCc----------------ccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 72 WMTKNVKLQGIPPSAFYSDE----------------HKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 72 ~l~~~~gV~v~pg~~f~~~~----------------~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
.| +..++.+..|+....-. .....++.+|+|++. |+++..++.|.+++.
T Consensus 379 ~l-~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~--Edid~li~~L~~al~ 443 (445)
T 1qgn_A 379 AL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGV--EDFDDLKADILQALD 443 (445)
T ss_dssp HC-SSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCS--SCHHHHHHHHHHHHH
T ss_pred hC-CCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHh
Confidence 53 33478888887653100 000125899999996 345666666666554
No 210
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=95.01 E-value=0.042 Score=39.32 Aligned_cols=102 Identities=9% Similarity=0.143 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccc-CCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcc
Q psy788 10 FYTISEELRPKREILADALDKAGMVPV-IPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFY 88 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~g~~~~-~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~ 88 (126)
++.+.+..++..+.+.+.|.+.++.+. .+.++...|..++-.. . +..++.+.| .++||.+.++....
T Consensus 246 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~--------~~~~l~~~L-~~~gI~v~~~~~~~ 313 (373)
T 3frk_A 246 LDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRS---E--------KRDELQKYL-NNNGIGTLIHYPIP 313 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEE---S--------SHHHHHHHH-HHTTBCCBCSCSSC
T ss_pred HHHHHHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEe---C--------CHHHHHHHH-HHCCCCcccCcCCc
Confidence 344445555555555555554443321 2333333333222110 1 356788876 57799998765211
Q ss_pred cCccc----------------CCCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 89 SDEHK----------------HLGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 89 ~~~~~----------------~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
....+ ....+.+|+++.. ++++++..++.|.++..
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~ 366 (373)
T 3frk_A 314 IHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKL 366 (373)
T ss_dssp GGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC-
T ss_pred cccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhh
Confidence 10000 0012689999985 88899999998887654
No 211
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=94.86 E-value=0.15 Score=37.38 Aligned_cols=24 Identities=21% Similarity=0.070 Sum_probs=14.8
Q ss_pred CCeEEEEeeCChhHHHHHHHHHHHhh
Q psy788 97 ENLIRYCFFKKDETLREASSILQTWR 122 (126)
Q Consensus 97 ~~~~Rl~~~~~~e~i~~~~~~l~~~~ 122 (126)
++++|+|++. +..++.++.|.+++
T Consensus 372 ~~~iRlSvg~--e~~~d~i~~l~~al 395 (403)
T 3cog_A 372 DTLIRLSVGL--EDEEDLLEDLDQAL 395 (403)
T ss_dssp TTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred cCeEEEEeCC--CCHHHHHHHHHHHH
Confidence 6899999998 22234444444444
No 212
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=94.63 E-value=0.21 Score=36.27 Aligned_cols=96 Identities=14% Similarity=0.037 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHHhC-CCc-ccCCC----------------cceEEEEeeCCcccccccCCCCCchhhHHHHHHHH
Q psy788 13 ISEELRPKREILADALDKA-GMV-PVIPD----------------GGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMT 74 (126)
Q Consensus 13 ~r~~~~~r~~~l~~~l~~~-g~~-~~~p~----------------gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 74 (126)
..+...++...+.+.|+++ .+. +..|. .|..++++++... . ....|...|
T Consensus 265 ~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~---~--------~~~~~~~~l- 332 (392)
T 3qhx_A 265 RMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR---T--------AAEQLCAKT- 332 (392)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH---H--------HHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH---H--------HHHHHHHhC-
Confidence 3455567777788888776 321 22221 2557889887521 0 345666664
Q ss_pred HhCCeeEeCCCCcccCccc-------------CCCCCeEEEEeeCChhHHHHHHHHHHHhh
Q psy788 75 KNVKLQGIPPSAFYSDEHK-------------HLGENLIRYCFFKKDETLREASSILQTWR 122 (126)
Q Consensus 75 ~~~gV~v~pg~~f~~~~~~-------------~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~ 122 (126)
+..++.+..|+.+.....+ ...++.+|||++. +..++-++.|.+++
T Consensus 333 ~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~~~i~~l~~al 391 (392)
T 3qhx_A 333 NIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI--EDVADLLDDLKQAL 391 (392)
T ss_dssp SSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred CCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEecc--CCHHHHHHHHHHHh
Confidence 5677888888765421000 0136789999997 23344455555443
No 213
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=93.24 E-value=0.34 Score=33.86 Aligned_cols=23 Identities=22% Similarity=0.307 Sum_probs=14.9
Q ss_pred CCeEEEEeeC--ChhHHHHHHHHHH
Q psy788 97 ENLIRYCFFK--KDETLREASSILQ 119 (126)
Q Consensus 97 ~~~~Rl~~~~--~~e~i~~~~~~l~ 119 (126)
++++|++++. +++.++..++.|.
T Consensus 304 ~~~iRis~~~~~t~~~i~~l~~~l~ 328 (331)
T 1pff_A 304 DNLIRLSVGCENVQDIIDDLKQALD 328 (331)
T ss_dssp TTEEEEECCSSCHHHHHHHHHHHHH
T ss_pred CCeEEEEEecCCHHHHHHHHHHHHH
Confidence 5899999997 3344554444443
No 214
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=92.85 E-value=1.7 Score=31.30 Aligned_cols=22 Identities=14% Similarity=0.196 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC
Q psy788 10 FYTISEELRPKREILADALDKA 31 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~ 31 (126)
+....+...++...+.+.|.++
T Consensus 262 ~~~~~~~~~~~~~~l~~~L~~~ 283 (398)
T 1gc0_A 262 LNLRMDRHCANAQVLAEFLARQ 283 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcC
Confidence 4455566677778888888764
No 215
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=92.39 E-value=0.41 Score=34.07 Aligned_cols=98 Identities=6% Similarity=-0.007 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccc-CCCcce----EEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCC
Q psy788 10 FYTISEELRPKREILADALDKAGMVPV-IPDGGY----FMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPP 84 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~g~~~~-~p~gg~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg 84 (126)
++...++.++..+.+.+.|.+.++.+. .+.++. ++++.++ +..++.+.| .++||.+.++
T Consensus 245 ~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~L-~~~GI~~~~~ 308 (367)
T 3nyt_A 245 FEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMD---------------NRESVQASL-KAAGVPTAVH 308 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECS---------------SHHHHHHHH-HHHTCCCBCS
T ss_pred HHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeC---------------CHHHHHHHH-HHCCCceecc
Confidence 455556666666777788877654432 233322 2223332 255677775 5789998876
Q ss_pred CCcccCc-cc------------CCCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 85 SAFYSDE-HK------------HLGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 85 ~~f~~~~-~~------------~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
..-.... .. ....+.+|+++.. ++++++..++.|.++-.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~~~ 362 (367)
T 3nyt_A 309 YPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNLEH 362 (367)
T ss_dssp CSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC---
T ss_pred CCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHhh
Confidence 4200000 00 0124678999875 88888988888876543
No 216
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=92.05 E-value=2.6 Score=30.60 Aligned_cols=20 Identities=15% Similarity=0.230 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHhC-CCc
Q psy788 15 EELRPKREILADALDKA-GMV 34 (126)
Q Consensus 15 ~~~~~r~~~l~~~l~~~-g~~ 34 (126)
+...++.+.+.+.|.++ ++.
T Consensus 284 ~~~~~~~~~l~~~L~~~~~v~ 304 (412)
T 2cb1_A 284 ARMSETARFLAERLQGHPKVK 304 (412)
T ss_dssp HHHHHHHHHHHHHHHTCTTCS
T ss_pred HHHHHHHHHHHHHHHcCCCee
Confidence 34456777888888876 565
No 217
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=90.33 E-value=2.4 Score=30.70 Aligned_cols=24 Identities=21% Similarity=0.368 Sum_probs=15.3
Q ss_pred CCeEEEEeeC--ChhHHHHHHHHHHH
Q psy788 97 ENLIRYCFFK--KDETLREASSILQT 120 (126)
Q Consensus 97 ~~~~Rl~~~~--~~e~i~~~~~~l~~ 120 (126)
++.+|+|++. +++.++...+.|.+
T Consensus 365 ~~~iRlS~g~~~~~~~i~~l~~al~~ 390 (393)
T 1n8p_A 365 DDLVRISVGIEDTDDLLEDIKQALKQ 390 (393)
T ss_dssp TTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred CCeEEEEEccCCHHHHHHHHHHHHHH
Confidence 5899999997 33444444444443
No 218
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=88.37 E-value=1.4 Score=31.75 Aligned_cols=102 Identities=11% Similarity=0.045 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-C--cccCCCc--ce--EEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeE
Q psy788 9 YFYTISEELRPKREILADALDKAG-M--VPVIPDG--GY--FMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQG 81 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g-~--~~~~p~g--g~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v 81 (126)
++....++.+++.+.+.+.|.+++ + .+..+.+ .+ |+.+.++.. . +..++...| .++||.+
T Consensus 249 ~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~l~~~L-~~~gI~~ 315 (377)
T 3ju7_A 249 KWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEE---V---------RNKQVIEDL-KKQKIEA 315 (377)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTT---S---------CHHHHHHHH-HTTTBCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCCh---h---------hHHHHHHHH-HHCCCce
Confidence 344555555666667777777763 3 2322222 22 233444421 0 256787875 5889998
Q ss_pred eCCCC--cccCcc-c-----------CCCCCeEEEEeeC--ChhHHHHHHHHHHHhhh
Q psy788 82 IPPSA--FYSDEH-K-----------HLGENLIRYCFFK--KDETLREASSILQTWRN 123 (126)
Q Consensus 82 ~pg~~--f~~~~~-~-----------~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~~ 123 (126)
.+++. ...... . ....+.+||++.. ++++++..++.|.+++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~ 373 (377)
T 3ju7_A 316 RLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVV 373 (377)
T ss_dssp BCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC---
T ss_pred ecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHh
Confidence 87651 111000 0 0124678998885 77888888888776553
No 219
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=87.44 E-value=3.6 Score=29.99 Aligned_cols=89 Identities=12% Similarity=-0.026 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCc-ccCC----------------CcceEEEEeeCCcccccccCCCCCchhhHHHHHHH
Q psy788 12 TISEELRPKREILADALDKA-GMV-PVIP----------------DGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWM 73 (126)
Q Consensus 12 ~~r~~~~~r~~~l~~~l~~~-g~~-~~~p----------------~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 73 (126)
...+...++...+.+.|+++ .+. +..| ..|.+++++++... + ....|...+
T Consensus 266 ~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~---~--------~~~~~~~~l 334 (400)
T 3nmy_A 266 LRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF---D--------AAKRFCEKT 334 (400)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH---H--------HHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH---H--------HHHHHHHcC
Confidence 34455567777888888776 222 2222 24678899997421 0 234555553
Q ss_pred HHhCCeeEeCCCCcccCc----------c------cCCCCCeEEEEeeC-ChhHHH
Q psy788 74 TKNVKLQGIPPSAFYSDE----------H------KHLGENLIRYCFFK-KDETLR 112 (126)
Q Consensus 74 ~~~~gV~v~pg~~f~~~~----------~------~~~~~~~~Rl~~~~-~~e~i~ 112 (126)
+-.++.+..|..+..-. . ....++.+|+|++. +.+++.
T Consensus 335 -~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~dli 389 (400)
T 3nmy_A 335 -ELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIEDLGDLR 389 (400)
T ss_dssp -SSSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHH
T ss_pred -CcceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHH
Confidence 34445555555433100 0 01246899999998 444443
No 220
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=87.23 E-value=5.9 Score=29.67 Aligned_cols=42 Identities=7% Similarity=0.107 Sum_probs=30.0
Q ss_pred HHHHHHHHhCCeeEeCCCCcccCcccCCCCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 68 KFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 68 ~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
.+...|+ ++||.+.|. +++.++...++++|++.++.|.+++.
T Consensus 403 ~~~~~ll-~~Gv~~~p~-------------~~~~~s~~~T~~dId~~l~al~~~l~ 444 (454)
T 4ao9_A 403 LLFFHLL-NEDIYSSPR-------------GFVVLSLPLTDADIDRYVAAIGSFIG 444 (454)
T ss_dssp HHHHHHH-HTTEECCTT-------------CEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HCCEEEcCC-------------CCEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 4666665 789987662 23345555688999999999988875
No 221
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=84.80 E-value=3.8 Score=33.10 Aligned_cols=46 Identities=13% Similarity=0.021 Sum_probs=35.4
Q ss_pred hHHHHHHHHHhCCeeEeCCCCcccCcccCCCCCeEEEE--eeCChhHHHHHHHHHHHhhhc
Q psy788 66 DFKFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYC--FFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 66 ~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~Rl~--~~~~~e~i~~~~~~l~~~~~~ 124 (126)
...++..+ .++||.+.|+ .+.+||+ +..++++|++++++|.+++++
T Consensus 780 a~~~~~~l-~e~Gv~v~p~------------g~~lrl~pp~~~t~e~id~~~~~l~~~l~~ 827 (831)
T 4a0g_A 780 AKSLLIML-REDGIFTRPL------------GNVIYLMCGPCTSPEICRRLLTKLYKRLGE 827 (831)
T ss_dssp HHHHHHHH-HHTTEECCCB------------TTEEEEECCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHH-HHCCcEEEec------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 44677776 4889998873 1478987 445899999999999988763
No 222
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=81.99 E-value=5.7 Score=29.11 Aligned_cols=19 Identities=11% Similarity=-0.029 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q psy788 13 ISEELRPKREILADALDKA 31 (126)
Q Consensus 13 ~r~~~~~r~~~l~~~l~~~ 31 (126)
..+...++...+.+.|.++
T Consensus 282 r~~~~~~n~~~l~~~L~~~ 300 (415)
T 2fq6_A 282 RLRQHHESSLKVAEWLAEH 300 (415)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 3445566777888888775
No 223
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=81.43 E-value=19 Score=28.72 Aligned_cols=46 Identities=9% Similarity=0.052 Sum_probs=31.7
Q ss_pred hhHHHHHHHHHhCCeeEeCCCCcccCcccCCCCCeEEEEeeC--ChhHHHHHHHHHHHhh
Q psy788 65 EDFKFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFK--KDETLREASSILQTWR 122 (126)
Q Consensus 65 ~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~Rl~~~~--~~e~i~~~~~~l~~~~ 122 (126)
+..++++.|. ++||.+.+. +.+.+|++++. +.++++..++.|.++.
T Consensus 516 ~~~~l~~~L~-e~GI~v~~~-----------~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~ 563 (730)
T 1c4k_A 516 PATIVANYLR-DHGIIPEKS-----------DLNSILFLMTPAETPAKMNNLITQLLQLQ 563 (730)
T ss_dssp CHHHHHHHHH-HTTCCCSEE-----------CSSEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHH-HCCcEEEEC-----------CCCeEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 3667888865 668876441 24678888874 7788888777776654
No 224
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=81.42 E-value=12 Score=26.70 Aligned_cols=25 Identities=12% Similarity=0.077 Sum_probs=17.5
Q ss_pred CCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 97 ENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 97 ~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
++++|++++.+ ..++.++.|.++++
T Consensus 363 ~~~iRlsvg~~--~~~~li~~l~~al~ 387 (389)
T 3acz_A 363 PELVRISVGIE--NVDDIIADLKQALE 387 (389)
T ss_dssp TTEEEEECCSS--CHHHHHHHHHHHHT
T ss_pred cCeEEEEeccC--CHHHHHHHHHHHHh
Confidence 58999999983 34566666666554
No 225
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=80.82 E-value=15 Score=27.36 Aligned_cols=68 Identities=16% Similarity=0.095 Sum_probs=42.8
Q ss_pred ceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcccCcccCCCCCeEEEEe--eCChhHHHHHHHHH
Q psy788 41 GYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCF--FKKDETLREASSIL 118 (126)
Q Consensus 41 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~Rl~~--~~~~e~i~~~~~~l 118 (126)
|+++-+++...... ..+......+...++ ++||.+.+...+ .+.+||.= ..+++++++++++|
T Consensus 384 Gl~~giel~~~~~~-----~~~~~~~~~v~~~~~-~~Gvl~~~~g~~---------~~~irl~PpL~it~~~id~~l~~l 448 (456)
T 4atq_A 384 GAMLAIELVQPGSK-----EPNAELTKAVAAACL-KEGVIILTCGTY---------GNVIRLLPPLVISDELLIDGLEVL 448 (456)
T ss_dssp TTEEEEEEBCTTSC-----CBCHHHHHHHHHHHH-HTTEECEEECTT---------SCEEEECCCTTCCHHHHHHHHHHH
T ss_pred ceEEEEEEecCCCC-----CcCHHHHHHHHHHHH-HCCCEEEecCCC---------CCEEEEECCCCCCHHHHHHHHHHH
Confidence 67777887532100 000011345677754 889998764222 35688864 44889999999999
Q ss_pred HHhhh
Q psy788 119 QTWRN 123 (126)
Q Consensus 119 ~~~~~ 123 (126)
.++++
T Consensus 449 ~~al~ 453 (456)
T 4atq_A 449 AAAIK 453 (456)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98886
No 226
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=76.28 E-value=9.9 Score=27.63 Aligned_cols=24 Identities=13% Similarity=0.127 Sum_probs=16.4
Q ss_pred CCeEEEEeeCChhHHHHHHHHHHHhh
Q psy788 97 ENLIRYCFFKKDETLREASSILQTWR 122 (126)
Q Consensus 97 ~~~~Rl~~~~~~e~i~~~~~~l~~~~ 122 (126)
++.+|+|++. ++++.-++.|.+++
T Consensus 397 ~~~vRlS~g~--e~~~~li~~l~~al 420 (421)
T 2ctz_A 397 PEMVRLSVGL--EHVEDLKAELKEAL 420 (421)
T ss_dssp TTEEEEECCS--SCHHHHHHHHHHHT
T ss_pred CCeEEEEeCC--CCHHHHHHHHHHHh
Confidence 5899999997 34555566665544
No 227
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=72.66 E-value=29 Score=26.41 Aligned_cols=100 Identities=13% Similarity=0.114 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccC-CCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCc
Q psy788 9 YFYTISEELRPKREILADALDKAGMVPVI-PDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87 (126)
Q Consensus 9 ~l~~~r~~~~~r~~~l~~~l~~~g~~~~~-p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 87 (126)
..+...+...+|-+.|.+.|.+.|+++.. .--.=.+++++...+ + +..+... ++.+.||.+---...
T Consensus 332 ~fk~Ya~qVv~NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g--~---------tG~~ae~-~Le~agItvNkN~iP 399 (490)
T 3ou5_A 332 MFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKG--L---------DGARAER-VLELVSITANKNTCP 399 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGT--C---------CHHHHHH-HHHHTTEECEEECCT
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCeeecCCCCceEEEEeccccC--C---------CHHHHHH-HHHHcCcEECCCCCC
Confidence 45667777788888999999888888753 222346677876432 1 2344444 467899987532222
Q ss_pred ccCcccCCCCCeEEEEee------CChhHHHHHHHHHHHhh
Q psy788 88 YSDEHKHLGENLIRYCFF------KKDETLREASSILQTWR 122 (126)
Q Consensus 88 ~~~~~~~~~~~~~Rl~~~------~~~e~i~~~~~~l~~~~ 122 (126)
+... +..+..+||+-. ..++++++-.+.|.+++
T Consensus 400 ~D~s--p~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l 438 (490)
T 3ou5_A 400 GDRS--AITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGV 438 (490)
T ss_dssp TCCC--SSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred CCCC--CCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 2211 123678999653 25566666555554443
No 228
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=65.08 E-value=11 Score=19.37 Aligned_cols=23 Identities=22% Similarity=0.351 Sum_probs=19.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q psy788 7 KCYFYTISEELRPKREILADALD 29 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~ 29 (126)
+.-+..++.+|..+|+=+.++++
T Consensus 27 e~Ei~elr~RY~~KRqPIldAi~ 49 (51)
T 2jo8_A 27 EQEIEEIRQKYQSKRQPILDAIE 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhHhhHHHHHh
Confidence 34578899999999999999885
No 229
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=46.06 E-value=51 Score=22.63 Aligned_cols=72 Identities=17% Similarity=0.159 Sum_probs=45.5
Q ss_pred HHHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcccCcccCCCCCeEE
Q psy788 22 EILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIR 101 (126)
Q Consensus 22 ~~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~R 101 (126)
..+.++..+.|+ +.+|-|| +++.. -.++.+-++ ++||--+-...|++--+ ..++.-
T Consensus 177 ~avAka~a~~g~-~lEPTGG----Idl~N---------------~~~I~~i~l-~aGv~~viPHIYssIID--k~TG~T- 232 (249)
T 3m0z_A 177 EAVAKACAAHDF-WLEPTGG----IDLEN---------------YSEILKIAL-DAGVSKIIPHIYSSIID--KASGNT- 232 (249)
T ss_dssp HHHHHHHHHTTC-EEEEBSS----CCTTT---------------HHHHHHHHH-HHTCSCBCCBCCGGGBC--TTTCCB-
T ss_pred HHHHHHHHHcCc-eECCCCC----ccHhh---------------HHHHHHHHH-HcCCCeecccccceecc--CCCCCC-
Confidence 345666666688 8888898 66653 335666655 88998776678876321 123322
Q ss_pred EEeeCChhHHHHHHHHHHHhh
Q psy788 102 YCFFKKDETLREASSILQTWR 122 (126)
Q Consensus 102 l~~~~~~e~i~~~~~~l~~~~ 122 (126)
.+|++++-+..+++++
T Consensus 233 -----rpedV~~ll~~~K~l~ 248 (249)
T 3m0z_A 233 -----RPADVRQLLEMTKQLV 248 (249)
T ss_dssp -----CHHHHHHHHHHHHHHC
T ss_pred -----CHHHHHHHHHHHHHhh
Confidence 3577777777776654
No 230
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=44.37 E-value=97 Score=23.13 Aligned_cols=46 Identities=17% Similarity=0.200 Sum_probs=32.4
Q ss_pred hHHHHHHHHHhCCeeEeCCCCcccCcccCCCCCeEEEE--eeCChhHHHHHHHHHHHhhhc
Q psy788 66 DFKFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYC--FFKKDETLREASSILQTWRNK 124 (126)
Q Consensus 66 ~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~Rl~--~~~~~e~i~~~~~~l~~~~~~ 124 (126)
...+...+ .++||.+.|. + +.+||. +..+++++++++++|.+++.+
T Consensus 420 ~~~~~~~~-~~~Gll~~~~---g---------~~i~l~PPL~it~~eid~~~~~l~~al~~ 467 (473)
T 4e3q_A 420 SERIANTC-TDLGLICRPL---G---------QSVVLCPPFILTEAQMDEMFDKLEKALDK 467 (473)
T ss_dssp HHHHHHHH-HHTTEECEEE---T---------TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHCCcEEEec---C---------CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 34577775 4889988662 1 346664 445889999999999888753
No 231
>1ei7_A Coat protein; disordered loops, viral protein; 2.45A {Tobacco mosaic virus} SCOP: a.24.5.1 PDB: 2om3_A 2tmv_P 2xea_A 3j06_A 1vtm_P
Probab=39.92 E-value=36 Score=21.71 Aligned_cols=33 Identities=9% Similarity=0.203 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHhC---C--CcccCCCcceEEEEeeCC
Q psy788 18 RPKREILADALDKA---G--MVPVIPDGGYFMVADWTQ 50 (126)
Q Consensus 18 ~~r~~~l~~~l~~~---g--~~~~~p~gg~~~~i~~~~ 50 (126)
+.-|+.+.+.|... . ..+.-|++|||+|..-+.
T Consensus 38 Q~aRd~vr~q~~~~~~~v~~~t~RFP~~~f~V~~~~~~ 75 (158)
T 1ei7_A 38 QQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAV 75 (158)
T ss_dssp HHHHHHHHHHHHHTCBCCCBTTBCCCSSCCEEETTCTT
T ss_pred HHHHHHHHHHHHhhccccCCcceecCCcceEEEecCch
Confidence 45677888888765 1 334569999999987654
No 232
>3mlz_P HIV-1 GP120 third variable region (V3) crown; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 2.99A {Human immunodeficiency virus 1}
Probab=39.47 E-value=16 Score=15.34 Aligned_cols=15 Identities=27% Similarity=0.370 Sum_probs=12.0
Q ss_pred hCCeeEeCCCCcccC
Q psy788 76 NVKLQGIPPSAFYSD 90 (126)
Q Consensus 76 ~~gV~v~pg~~f~~~ 90 (126)
...|.+-||..|+..
T Consensus 5 rk~i~iGpG~~fy~t 19 (25)
T 3mlz_P 5 RKGIHIGPGRAFYAT 19 (26)
T ss_dssp CCCCEECTTCCCCCC
T ss_pred EEEEeecCCeeEEEc
Confidence 356889999999864
No 233
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=38.03 E-value=74 Score=22.11 Aligned_cols=72 Identities=18% Similarity=0.236 Sum_probs=45.7
Q ss_pred HHHHHHHhCCCcccCCCcceEEEEeeCCcccccccCCCCCchhhHHHHHHHHHhCCeeEeCCCCcccCcccCCCCCeEEE
Q psy788 23 ILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRY 102 (126)
Q Consensus 23 ~l~~~l~~~g~~~~~p~gg~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~Rl 102 (126)
.+.++..+.|+ +.+|-|| |++.. -.++.+-++ ++||--+-...|++--+ ..++.-
T Consensus 201 avAkAca~~g~-~lEPTGG----Idl~N---------------f~~I~~i~l-~aGv~~viPHIYsSIID--k~TG~T-- 255 (275)
T 3m6y_A 201 AVAKACAEEGF-ALEPTGG----IDKEN---------------FETIVRIAL-EANVEQVIPHVYSSIID--KETGNT-- 255 (275)
T ss_dssp HHHHHHHHHTC-EEEEBSS----CCTTT---------------HHHHHHHHH-HTTCSCBCCEECGGGBC--TTTCCB--
T ss_pred HHHHHHHHcCc-eECCCCC----ccHhH---------------HHHHHHHHH-HcCCCeecccccceecc--CCCCCC--
Confidence 45556656688 7888888 66553 335667655 88998766677775321 123322
Q ss_pred EeeCChhHHHHHHHHHHHhhh
Q psy788 103 CFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 103 ~~~~~~e~i~~~~~~l~~~~~ 123 (126)
.+|.+++-+..+++++.
T Consensus 256 ----rpedV~~ll~~~K~l~~ 272 (275)
T 3m6y_A 256 ----KVEAVRELLAVVKKLVD 272 (275)
T ss_dssp ----CHHHHHHHHHHHHHHHT
T ss_pred ----CHHHHHHHHHHHHHHHh
Confidence 35777888777777654
No 234
>2v7f_A RPS19, RPS19E SSU ribosomal protein S19E; diamond blackfan anemia small ribosomal subunit; 1.15A {Pyrococcus abyssi} SCOP: a.4.5.84
Probab=37.48 E-value=33 Score=21.64 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=26.7
Q ss_pred HHHHHHHH--------------HHHHHHHHHHHhC---CCcccCCCcceEE
Q psy788 11 YTISEELR--------------PKREILADALDKA---GMVPVIPDGGYFM 44 (126)
Q Consensus 11 ~~~r~~~~--------------~r~~~l~~~l~~~---g~~~~~p~gg~~~ 44 (126)
..+++.|. -.+..+.++|+.+ |+-...|.+|.|+
T Consensus 71 ~~La~~~gg~k~~g~~p~~~~~vSr~tVR~AL~~Le~~GlV~~~~~~G~~V 121 (150)
T 2v7f_A 71 ERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFVEKVPGKGRVI 121 (150)
T ss_dssp HHHHHHHCC----CCCTTSCCCHHHHHHHHHHHHHHHTTSEEEETTTEEEE
T ss_pred HHHHHHHCCCccCCcCCccccccchHHHHHHHHHHHHCCCEEEeCCCceEE
Confidence 67888888 8888888888775 7666668889776
No 235
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=36.65 E-value=16 Score=16.22 Aligned_cols=19 Identities=26% Similarity=0.424 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q psy788 13 ISEELRPKREILADALDKA 31 (126)
Q Consensus 13 ~r~~~~~r~~~l~~~l~~~ 31 (126)
+|+++++-|+.+.+-|.++
T Consensus 2 lrkrlrkfrnkikeklkki 20 (32)
T 1lyp_A 2 LRKRLRKFRNKIKEKLKKI 20 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3455555556565555544
No 236
>2bp3_S Platelet glycoprotein IB alpha chain; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens}
Probab=35.28 E-value=17 Score=15.44 Aligned_cols=12 Identities=8% Similarity=0.058 Sum_probs=8.8
Q ss_pred CcceEEEEeeCC
Q psy788 39 DGGYFMVADWTQ 50 (126)
Q Consensus 39 ~gg~~~~i~~~~ 50 (126)
..++|+|+.-..
T Consensus 9 rsslflwvr~ng 20 (26)
T 2bp3_S 9 RSSLFLWVRPNG 20 (26)
T ss_pred hheEEEEEccCC
Confidence 457899997653
No 237
>3kml_A Coat protein; permutant, TMV, TMVP, CPTMVP, acetylation, capsid protein, virion, viral protein; 3.01A {Tobacco mosaic virus}
Probab=33.84 E-value=52 Score=21.07 Aligned_cols=33 Identities=9% Similarity=0.203 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhC---C--CcccCCCcceEEEEeeCC
Q psy788 18 RPKREILADALDKA---G--MVPVIPDGGYFMVADWTQ 50 (126)
Q Consensus 18 ~~r~~~l~~~l~~~---g--~~~~~p~gg~~~~i~~~~ 50 (126)
+.-|+.+.+.|... . ..+.-|++|||+|..=+.
T Consensus 100 Q~aRd~vr~qls~~~~~v~s~tvRFP~~~F~V~~~~~~ 137 (161)
T 3kml_A 100 QQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAV 137 (161)
T ss_dssp HHHHHHHHHHHHHSCBCCCBTTBCCCSSCCEEETTCTT
T ss_pred HHHHHHHHHHHhcccccCCCCccccCCCceEEEecCch
Confidence 45678888888775 2 334568999999986553
No 238
>1kaf_A Transcription regulatory protein MOTA; escherichia coli, X-RAY crystallography, protein-DNA interactions, structural genomics; 1.60A {Enterobacteria phage T4} SCOP: d.199.1.1
Probab=29.44 E-value=60 Score=19.34 Aligned_cols=28 Identities=18% Similarity=0.154 Sum_probs=21.3
Q ss_pred HHHHHHHhCCCcccCCCcceEEEEeeCCc
Q psy788 23 ILADALDKAGMVPVIPDGGYFMVADWTQL 51 (126)
Q Consensus 23 ~l~~~l~~~g~~~~~p~gg~~~~i~~~~~ 51 (126)
-..+.|.++|+++....|| ..++|++..
T Consensus 67 ~~~~~f~slGm~~K~~~~g-NtYiDi~~s 94 (108)
T 1kaf_A 67 HHIQKFTDIGMSCKIAKNG-NVYLDIKRS 94 (108)
T ss_dssp HHHHHHHTTTCEEEECTTS-EEEEEEECC
T ss_pred HHHHHHHhcCceEEEcCCC-cEEEecccc
Confidence 3567777789888655588 999999863
No 239
>3tqn_A Transcriptional regulator, GNTR family; regulatory functions; 2.80A {Coxiella burnetii}
Probab=28.84 E-value=33 Score=20.06 Aligned_cols=35 Identities=14% Similarity=0.148 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC---CCcccCCCcceEE
Q psy788 10 FYTISEELRPKREILADALDKA---GMVPVIPDGGYFM 44 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~---g~~~~~p~gg~~~ 44 (126)
.+.+.+.|.-.|..+.+++..+ |+-...|..|+|+
T Consensus 36 ~~~La~~~~vSr~tvr~al~~L~~~Gli~~~~~~G~~V 73 (113)
T 3tqn_A 36 IRKISTEYQINPLTVSKAYQSLLDDNVIEKRRGLGMLV 73 (113)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTTEEEE
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHCCCEEEecCCeEEE
Confidence 5677888888888888888775 7766778888665
No 240
>4ham_A LMO2241 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, winged helix-turn-helix, four helix bundle; 1.91A {Listeria monocytogenes}
Probab=28.41 E-value=33 Score=20.69 Aligned_cols=36 Identities=8% Similarity=0.241 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC---CCcccCCCcceEEE
Q psy788 10 FYTISEELRPKREILADALDKA---GMVPVIPDGGYFMV 45 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~---g~~~~~p~gg~~~~ 45 (126)
.+.+.+.|.-.|..+.+++..+ |+-...|..|+|+-
T Consensus 41 er~La~~~gVSr~tVReAl~~L~~eGlv~~~~g~G~~V~ 79 (134)
T 4ham_A 41 IREFASRIGVNPNTVSKAYQELERQEVIITVKGKGTFIA 79 (134)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTTEEEEC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHCCcEEEEcCcEEEEe
Confidence 4678888888899998888876 88778888887773
No 241
>3neu_A LIN1836 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; 1.58A {Listeria innocua}
Probab=27.73 E-value=35 Score=20.38 Aligned_cols=37 Identities=14% Similarity=0.205 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC---CCcccCCCcceEEEE
Q psy788 10 FYTISEELRPKREILADALDKA---GMVPVIPDGGYFMVA 46 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~---g~~~~~p~gg~~~~i 46 (126)
.+.+.+.|.-.|..+.+++..+ |+-...|..|+|+--
T Consensus 40 ~~~La~~~~vSr~tvr~Al~~L~~~G~i~~~~g~G~~V~~ 79 (125)
T 3neu_A 40 VREMGVKLAVNPNTVSRAYQELERAGYIYAKRGMGSFVTS 79 (125)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTTEEEECC
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHCCeEEEecCCEEEEec
Confidence 5678888888888888888875 777778888877643
No 242
>1cgm_E Cucumber green mottle mosaic virus; helical virus; 3.40A {Cucumber green mottle mosaic virus} SCOP: a.24.5.1
Probab=26.58 E-value=27 Score=22.36 Aligned_cols=32 Identities=16% Similarity=0.354 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhC---C--CcccCCCcceEEEEeeCC
Q psy788 19 PKREILADALDKA---G--MVPVIPDGGYFMVADWTQ 50 (126)
Q Consensus 19 ~r~~~l~~~l~~~---g--~~~~~p~gg~~~~i~~~~ 50 (126)
.-|+.+.+.|... . ..+.-|++|||+|..-+.
T Consensus 40 ~aRd~vr~q~s~~~~~v~~~tvRFP~~~f~Vy~~~~~ 76 (161)
T 1cgm_E 40 AGRDSFRESLSALPSSVVDINSRFPDAGFYAFLNGPV 76 (161)
T ss_dssp HHHHHHHHHHHHCCCCSCSSSCCCCCSCCCBCCCTTT
T ss_pred HHHHHHHHHHHhhcccCCCcceecCCcceEEEecCch
Confidence 4577788888775 1 344569999999987664
No 243
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=26.51 E-value=67 Score=15.95 Aligned_cols=24 Identities=17% Similarity=0.282 Sum_probs=19.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHh
Q psy788 7 KCYFYTISEELRPKREILADALDK 30 (126)
Q Consensus 7 ~~~l~~~r~~~~~r~~~l~~~l~~ 30 (126)
++.+..+|+.+++-.+-+++++..
T Consensus 14 qEIL~E~RkElqK~K~EIIeAi~~ 37 (45)
T 1use_A 14 QELLEEVKKELQKVKEEIIEAFVQ 37 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788999999888888888764
No 244
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=24.41 E-value=77 Score=24.36 Aligned_cols=28 Identities=14% Similarity=0.157 Sum_probs=22.9
Q ss_pred CCCeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 96 GENLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 96 ~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
|-+.+||||++ +.+...+-++.++++.+
T Consensus 69 Gmnv~RlNfSHg~~e~h~~~i~~iR~~~~ 97 (526)
T 4drs_A 69 GMSVARLNFSHGDHESHFKTLQNIREAAK 97 (526)
T ss_dssp TCCEEEEETTSSCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 56789999998 88888888888877643
No 245
>3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A
Probab=23.69 E-value=77 Score=19.80 Aligned_cols=51 Identities=12% Similarity=-0.021 Sum_probs=28.9
Q ss_pred HHHHHHHHhCCeeEeCCCCcccCcccCCCCCeEEEEeeCChh-HHHHHHHHHHHhhh
Q psy788 68 KFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFKKDE-TLREASSILQTWRN 123 (126)
Q Consensus 68 ~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~Rl~~~~~~e-~i~~~~~~l~~~~~ 123 (126)
.+.+.|. +.|.+-..++.+... ...+.+-+++.+.++ .++++++.+.+.++
T Consensus 58 rL~~~lr-e~gl~y~~~~~~~~~----~~~g~~~i~~~~~~~~~~~~~~~~i~~~l~ 109 (197)
T 3ih6_A 58 RLYHALV-PTKLASGVFGFTMDQ----LDPGLAMFGAQLQPGMDQDKALQTLTATLE 109 (197)
T ss_dssp HHHHHHT-TTTSCSEEEEEEETT----SSSCEEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred hHHHHHH-hcCceEEEEeccccc----cCCeEEEEEEEECCCCCHHHHHHHHHHHHH
Confidence 4555554 446655444433221 246778788877555 46777766665554
No 246
>3by6_A Predicted transcriptional regulator; structural genomics, PSI-2, MCSG, structure initiative, midwest center for structural genomic binding; 2.20A {Oenococcus oeni}
Probab=23.67 E-value=47 Score=19.91 Aligned_cols=36 Identities=17% Similarity=0.281 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC---CCcccCCCcceEEE
Q psy788 10 FYTISEELRPKREILADALDKA---GMVPVIPDGGYFMV 45 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~---g~~~~~p~gg~~~~ 45 (126)
.+.+.+.|.-.|..+.++|..+ |+-...|..|+|+-
T Consensus 38 e~~La~~~~vSr~tvr~Al~~L~~~Gli~~~~g~G~~V~ 76 (126)
T 3by6_A 38 VRETALQEKINPNTVAKAYKELEAQKVIRTIPGKGTFIT 76 (126)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTTEEEEC
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHCCCEEEecCCeEEEc
Confidence 5677788888888888888775 77777888897774
No 247
>3mly_P HIV-1 GP120 third variable region (V3) crown; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.70A {Human immunodeficiency virus 1} PDB: 2b1h_P 3mlu_P 3ujj_P
Probab=23.43 E-value=18 Score=14.79 Aligned_cols=14 Identities=29% Similarity=0.501 Sum_probs=10.7
Q ss_pred CCeeEeCCCCcccC
Q psy788 77 VKLQGIPPSAFYSD 90 (126)
Q Consensus 77 ~gV~v~pg~~f~~~ 90 (126)
..|.+-||..|+..
T Consensus 5 k~i~iGpG~~fy~t 18 (23)
T 3mly_P 5 KSIKIRPRQAFYAT 18 (26)
T ss_pred EEEeecCCeeEEec
Confidence 45778899999864
No 248
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=23.04 E-value=51 Score=22.40 Aligned_cols=24 Identities=25% Similarity=0.524 Sum_probs=15.8
Q ss_pred HHHHHhCCCcccCCCcceEEEEeeC
Q psy788 25 ADALDKAGMVPVIPDGGYFMVADWT 49 (126)
Q Consensus 25 ~~~l~~~g~~~~~p~gg~~~~i~~~ 49 (126)
.+.++.+++..+ |+||||.-..-+
T Consensus 22 ~~lI~~L~L~PH-PEGG~yrEt~Rs 45 (225)
T 3m3i_A 22 EFWIKRLQLVPH-PEGGYYSEVVRS 45 (225)
T ss_dssp HHHHHHTTCEEC-TTSSEEEEEEEC
T ss_pred HHHHHHCCCccC-CCCceEEEEEEC
Confidence 445555567665 799999866543
No 249
>1rmv_A Ribgrass mosaic virus coat protein; tobamovirus, RMV cluster, coat protein (viral), complex (coat protein/RNA), helical virus; 2.90A {Ribgrass mosaic virus} SCOP: a.24.5.1
Probab=22.79 E-value=49 Score=21.10 Aligned_cols=32 Identities=13% Similarity=0.233 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHhC-----CCcccCCCcceEEEEeeCC
Q psy788 19 PKREILADALDKA-----GMVPVIPDGGYFMVADWTQ 50 (126)
Q Consensus 19 ~r~~~l~~~l~~~-----g~~~~~p~gg~~~~i~~~~ 50 (126)
.-|+.+.+.|... .....-|++|||+|..-+.
T Consensus 40 ~aRd~vr~qf~~~~~~v~~~t~RFP~~~f~V~~~~~~ 76 (157)
T 1rmv_A 40 AGRDTVRQQFANLLSTIVAPNQRFPDTGFRVYVNSAV 76 (157)
T ss_dssp HHHHHHHHHHHHHCCCCCCSSSCCCSSCCEECTTSTT
T ss_pred HHHHHHHHHHHhcccCCCCCceecCCCceEEEecCcc
Confidence 4567777777664 1334569999999986653
No 250
>3uji_P Envelope glycoprotein GP160; IG domains, antibody FAB, antigen binding, the third variabl of HIV-1 GP120, immune system; HET: NAG FUC; 1.60A {Hiv-1 M} PDB: 3mlw_P 1f58_P 3mlx_P* 1ai1_P 1acy_P 2b1a_P 3mlt_P
Probab=22.59 E-value=20 Score=14.69 Aligned_cols=14 Identities=29% Similarity=0.489 Sum_probs=10.7
Q ss_pred CCeeEeCCCCcccC
Q psy788 77 VKLQGIPPSAFYSD 90 (126)
Q Consensus 77 ~gV~v~pg~~f~~~ 90 (126)
..|.+-||..|+..
T Consensus 5 k~i~iGpG~~fy~t 18 (23)
T 3uji_P 5 KRIHIGPGRAFYTT 18 (26)
T ss_pred EEEeecCCeeEEec
Confidence 45778899999864
No 251
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=21.89 E-value=83 Score=23.77 Aligned_cols=27 Identities=4% Similarity=0.118 Sum_probs=21.5
Q ss_pred CCeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 97 ENLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 97 ~~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
-+-+||||++ +.+.-.+-++.++++.+
T Consensus 42 mnv~RlNfSHg~~e~h~~~i~~iR~~~~ 69 (461)
T 3qtg_A 42 VDGVRINLAHASPNEVKFRIEAVRSYEK 69 (461)
T ss_dssp CSEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 5789999998 77888888888876543
No 252
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=21.15 E-value=99 Score=23.93 Aligned_cols=28 Identities=25% Similarity=0.233 Sum_probs=22.7
Q ss_pred CCCeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 96 GENLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 96 ~~~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
|-+-+||||++ +.+.-.+-++.++++.+
T Consensus 87 Gmnv~RlNfSHG~~e~h~~~i~~iR~a~~ 115 (550)
T 3gr4_A 87 GMNVARLNFSHGTHEYHAETIKNVRTATE 115 (550)
T ss_dssp TCCEEEEETTSSCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 56889999998 78888888888887644
No 253
>3d3c_J 30S ribosomal protein S10, N utilization substance protein B; NUSB, NUSE, phage lambda, lambda N antitermination antitermination; 2.60A {Escherichia coli} PDB: 2kvq_E 3d3b_J* 3imq_J
Probab=20.97 E-value=1.3e+02 Score=17.06 Aligned_cols=27 Identities=11% Similarity=0.122 Sum_probs=22.7
Q ss_pred CeEEEEeeC-ChhHHHHHHHHHHHhhhc
Q psy788 98 NLIRYCFFK-KDETLREASSILQTWRNK 124 (126)
Q Consensus 98 ~~~Rl~~~~-~~e~i~~~~~~l~~~~~~ 124 (126)
.-+|+.+.+ +...++..++.|.+..++
T Consensus 9 ~kirI~L~S~d~~~Ld~~~~~Iv~~ak~ 36 (87)
T 3d3c_J 9 QRIRIRLKAFDHRLIDQATAEIVETAKR 36 (87)
T ss_dssp CEEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEECCHHHHHHHHHHHHHHHHH
Confidence 579999986 899999999999877663
No 254
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens}
Probab=20.81 E-value=74 Score=22.53 Aligned_cols=28 Identities=7% Similarity=-0.021 Sum_probs=17.9
Q ss_pred CCCeEEEEeeCChhHHHHHHHHHHHhhh
Q psy788 96 GENLIRYCFFKKDETLREASSILQTWRN 123 (126)
Q Consensus 96 ~~~~~Rl~~~~~~e~i~~~~~~l~~~~~ 123 (126)
..+.+.+.+.++++..+++++.+.+.++
T Consensus 308 ~~g~~~i~~~~~~~~~~~~~~~i~~~l~ 335 (434)
T 3gwb_A 308 ARGPFMINLQTRAEMSEGTLKLVQDVFA 335 (434)
T ss_dssp SCCEEEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred CceeEEEEEecchhhHHHHHHHHHHHHH
Confidence 3577878887766556666666655443
No 255
>2ek5_A Predicted transcriptional regulators; helix-turn-helix, interwined alpha helices; 2.20A {Corynebacterium glutamicum atcc 13032} PDB: 2du9_A
Probab=20.20 E-value=47 Score=20.05 Aligned_cols=35 Identities=14% Similarity=0.108 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC---CCcccCCCcceEE
Q psy788 10 FYTISEELRPKREILADALDKA---GMVPVIPDGGYFM 44 (126)
Q Consensus 10 l~~~r~~~~~r~~~l~~~l~~~---g~~~~~p~gg~~~ 44 (126)
.+.+.+.|.-.|..+.++|..+ |+-...|..|+|+
T Consensus 31 e~~La~~~gvSr~tVr~Al~~L~~~Gli~~~~g~G~~V 68 (129)
T 2ek5_A 31 TNELAAFHRINPATARNGLTLLVEAGILYKKRGIGMFV 68 (129)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHTTTSEEEETTTEEEE
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHCCcEEEecCCEEEE
Confidence 5677778888888888888765 7766778888776
No 256
>3r2c_J Protein NUSE, 30S ribosomal protein S10; cross species NUSB-NUSE-RNA interaction; HET: PEG; 1.90A {Aquifex aeolicus} PDB: 3r2d_J
Probab=20.09 E-value=1.3e+02 Score=16.87 Aligned_cols=26 Identities=12% Similarity=0.031 Sum_probs=21.6
Q ss_pred CeEEEEeeC-ChhHHHHHHHHHHHhhh
Q psy788 98 NLIRYCFFK-KDETLREASSILQTWRN 123 (126)
Q Consensus 98 ~~~Rl~~~~-~~e~i~~~~~~l~~~~~ 123 (126)
..+|+.+.+ +...++..++.|.+..+
T Consensus 4 ~kiRI~L~S~d~~~Ld~~~~~Iv~~ak 30 (83)
T 3r2c_J 4 EKIRIKLRAYDHRLLDQSVKQIIETVK 30 (83)
T ss_dssp CCEEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEEECCHHHHHHHHHHHHHHHH
Confidence 358999976 88999999999887765
Done!