RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy788
(126 letters)
>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I
{Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}
Length = 418
Score = 77.9 bits (190), Expect = 1e-18
Identities = 66/125 (52%), Positives = 89/125 (71%)
Query: 1 MTTAPDKCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTE 60
+CYF +IS EL KR+ +A L + GM P +P GGYFMVADW+ L + L E
Sbjct: 294 KRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQE 353
Query: 61 SDKYEDFKFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQT 120
+D +D++F KWMTK+V LQGIPPSAFYS+ +KHLGE+ +RYCFFKKDE L++A+ IL+
Sbjct: 354 TDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEILRK 413
Query: 121 WRNKN 125
W+ +
Sbjct: 414 WKGSS 418
>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I
{Human (Homo sapiens) [TaxId: 9606]}
Length = 418
Score = 64.8 bits (156), Expect = 5e-14
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 8 CYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQL-RPMLRLDTESDKYED 66
YF + ++ R+ + +L G+ P+IP G YF++ D + R M L D+ D
Sbjct: 301 SYFVQFPQAMQRCRDHMIRSLQSVGLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYD 360
Query: 67 FKFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWR 122
+F KWM KN L IP S FYS H+ ++ IR+CF K + TL+ L+ W+
Sbjct: 361 RRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWK 416
>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus
furiosus [TaxId: 2261]}
Length = 395
Score = 50.3 bits (119), Expect = 7e-09
Identities = 18/118 (15%), Positives = 39/118 (33%), Gaps = 16/118 (13%)
Query: 5 PDKCYFYTISEELRPKREILADALDKAGMVPVI-PDGGYFMVADWTQLRPMLRLDTESDK 63
Y ++L+ +R+ + L++ + P G +++ + + +
Sbjct: 289 GPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPK-------IEVGPWKN- 340
Query: 64 YEDFKFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTW 121
D +F + N + + S F G R F E L EA + +
Sbjct: 341 --DKEFVLDVLHNAHVLFVHGSGFGEY-----GAGHFRAVFLPPIEILEEAMDRFEKF 391
>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL
{Escherichia coli [TaxId: 562]}
Length = 382
Score = 50.1 bits (118), Expect = 7e-09
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 28 LDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAF 87
L+++ + + +G YF++ D++ + + +D +F +W+T+ + IP S F
Sbjct: 302 LNESRLEILPCEGTYFLLVDYSAVSTL----------DDVEFCQWLTQEHGVAAIPLSVF 351
Query: 88 YSDEHKHLGENLIRYCFFKKDETLREASSILQ 119
+D LIR CF KK+ TL A+ L+
Sbjct: 352 CADPF---PHKLIRLCFAKKESTLLAAAERLR 380
>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase
(ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId:
4081]}
Length = 428
Score = 47.3 bits (111), Expect = 6e-08
Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 12/115 (10%)
Query: 8 CYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDF 67
+ + L + + + L+ G+ + + G F W LRP+LR T +
Sbjct: 320 NFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFC---WMDLRPLLRESTFDS---EM 373
Query: 68 KFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFKKDE-TLREASSILQTW 121
+ + +VKL P S+F R CF D+ T+ A + ++ +
Sbjct: 374 SLWRVIINDVKLNVSPGSSFECQ-----EPGWFRVCFANMDDGTVDIALARIRRF 423
>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium
lapideum [TaxId: 32060]}
Length = 388
Score = 47.1 bits (111), Expect = 7e-08
Identities = 17/117 (14%), Positives = 39/117 (33%), Gaps = 19/117 (16%)
Query: 6 DKCYFYTISEELRPKREILADALDKAGMVPVI-PDGGYFMVADWTQLRPMLRLDTESDKY 64
+ + +R + DAL+ + PDG ++M +
Sbjct: 285 SQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKT-----------GR 333
Query: 65 EDFKFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTW 121
F + ++ +P +AF +D+ IR + +T++ L+ +
Sbjct: 334 SSLDFCSELLDQHQVATVPGAAFGADDC-------IRLSYATDLDTIKRGMERLEKF 383
>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma
cruzi [TaxId: 5693]}
Length = 412
Score = 44.1 bits (102), Expect = 1e-06
Identities = 16/118 (13%), Positives = 43/118 (36%), Gaps = 14/118 (11%)
Query: 8 CYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDF 67
+++ + + G+ P +P G ++++ + L+ D D
Sbjct: 307 HLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSR-------IDLEKYRDIKTDV 359
Query: 68 KFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQTWRNKN 125
+F + + + +Q +P + F+ R + E REA ++ + ++
Sbjct: 360 EFFEKLLEEENVQVLPGTIFH-------APGFTRLTTTRPVEVYREAVERIKAFCQRH 410
>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase
(ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}
Length = 431
Score = 43.9 bits (102), Expect = 1e-06
Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 6 DKCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYE 65
K Y + L+ +++ L L K+G+ + + G F W +R +LR +T
Sbjct: 321 TKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFC---WVDMRHLLRSNTFEA--- 374
Query: 66 DFKFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFKKDE-TLREASSILQTW 121
+ + K + V L P S+ + R CF E TL A L+ +
Sbjct: 375 EMELWKKIVYEVHLNISPGSSCHCT-----EPGWFRVCFANLPERTLDLAMQRLKAF 426
>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 388
Score = 40.6 bits (94), Expect = 1e-05
Identities = 22/121 (18%), Positives = 44/121 (36%), Gaps = 16/121 (13%)
Query: 1 MTTAPDKCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTE 60
+ + +E +R+++ L++ G+ V P G +++
Sbjct: 277 LKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDT--------- 327
Query: 61 SDKYEDFKFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQT 120
KF++ M K ++ +P SAF GE +R + E L EA ++
Sbjct: 328 --GLTSKKFSELMLKEARVAVVPGSAFGKA-----GEGYVRISYATAYEKLEEAMDRMER 380
Query: 121 W 121
Sbjct: 381 V 381
>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga
maritima [TaxId: 2336]}
Length = 375
Score = 40.0 bits (92), Expect = 2e-05
Identities = 21/121 (17%), Positives = 47/121 (38%), Gaps = 21/121 (17%)
Query: 1 MTTAPDKCYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTE 60
+ + + + ++ + + L K G+ V P+G +++ + ++R
Sbjct: 273 AALKALEVDNSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYL---FFKVRG------- 322
Query: 61 SDKYEDFKFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFKKDETLREASSILQT 120
+D KF + + + K+ +P SAF +R F E L EA ++
Sbjct: 323 ----DDVKFCERLLEEKKVALVPGSAFL-------KPGFVRLSFATSIERLTEALDRIED 371
Query: 121 W 121
+
Sbjct: 372 F 372
>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus
thermophilus [TaxId: 274]}
Length = 382
Score = 39.4 bits (91), Expect = 4e-05
Identities = 20/107 (18%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 8 CYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDF 67
+ E R +R++L + L G+ V P G ++++ D + + P ++
Sbjct: 287 AFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAP-----------DEV 335
Query: 68 KFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFKKDETLREA 114
+ A+ + + + +P + F + H +R + +E LR+A
Sbjct: 336 RAAERLLEA-GVAVVPGTDFAAFGH-------VRLSYATSEENLRKA 374
>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus
thermophilus [TaxId: 274]}
Length = 368
Score = 36.6 bits (83), Expect = 3e-04
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 20/111 (18%)
Query: 8 CYFYTISEELRPKREILADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDF 67
++ + E R +R++LA L G+ +P+G YF++A+
Sbjct: 274 GFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPGWD--------------- 318
Query: 68 KFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFKKDETLREASSIL 118
A + + ++ IP SAFY ++ ++L R+ F K +E L A L
Sbjct: 319 --AFRLVEEARVALIPASAFYLEDP---PKDLFRFAFCKTEEELHLALERL 364
>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga
maritima [TaxId: 2336]}
Length = 389
Score = 35.6 bits (80), Expect = 7e-04
Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 20/95 (21%)
Query: 32 GMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQG-----IPPSA 86
P G +++ L E + +FA+WM + + G P
Sbjct: 304 LKRFTKPSGAFYI---------TAELPVEDAE----EFARWMLTDFNMDGETTMVAPLRG 350
Query: 87 FYSDEHKHLGENLIRYCFFKKDETLREASSILQTW 121
FY LG+ IR + + L A +L
Sbjct: 351 FYLTPG--LGKKEIRIACVLEKDLLSRAIDVLMEG 383
>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}
Length = 394
Score = 34.4 bits (77), Expect = 0.002
Identities = 11/89 (12%), Positives = 23/89 (25%), Gaps = 16/89 (17%)
Query: 33 MVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYSDEH 92
+ + +G Y D+ L K + ++M ++ F
Sbjct: 317 IKAPLIEGTYLQWIDFRAL-----------KMDHKAMEEFMIHKAQIFFDEGYIFGDG-- 363
Query: 93 KHLGENLIRYCFFKKDETLREASSILQTW 121
G R ++E+ L
Sbjct: 364 ---GIGFERINLAAPSSVIQESLERLNKA 389
>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY
{Escherichia coli [TaxId: 562]}
Length = 361
Score = 32.1 bits (71), Expect = 0.013
Identities = 10/65 (15%), Positives = 20/65 (30%), Gaps = 5/65 (7%)
Query: 57 LDTESDKYEDFKFAKWMTKNVKLQGIPPSAFYSDEHKHLGENLIRYCFFKKDETLREASS 116
LD +D K + + K+ +P + + G +R L + +
Sbjct: 297 LDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEE-----GRGFVRLNAGCPRSKLEKGVA 351
Query: 117 ILQTW 121
L
Sbjct: 352 GLINA 356
>d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis
[TaxId: 1773]}
Length = 280
Score = 26.4 bits (57), Expect = 1.0
Identities = 7/44 (15%), Positives = 15/44 (34%)
Query: 24 LADALDKAGMVPVIPDGGYFMVADWTQLRPMLRLDTESDKYEDF 67
+ ++G+ ++P GG + K+E F
Sbjct: 53 AFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETF 96
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.425
Gapped
Lambda K H
0.267 0.0381 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 508,669
Number of extensions: 22083
Number of successful extensions: 87
Number of sequences better than 10.0: 1
Number of HSP's gapped: 70
Number of HSP's successfully gapped: 21
Length of query: 126
Length of database: 2,407,596
Length adjustment: 75
Effective length of query: 51
Effective length of database: 1,377,846
Effective search space: 70270146
Effective search space used: 70270146
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.2 bits)