Query psy7882
Match_columns 329
No_of_seqs 269 out of 1822
Neff 6.1
Searched_HMMs 46136
Date Fri Aug 16 21:13:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7882.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7882hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0160 GabT 4-aminobutyrate a 100.0 2.1E-44 4.4E-49 359.1 14.9 181 3-197 251-439 (447)
2 COG0161 BioA Adenosylmethionin 100.0 2.2E-43 4.7E-48 350.6 15.5 185 4-197 245-437 (449)
3 COG4992 ArgD Ornithine/acetylo 100.0 1.6E-42 3.4E-47 338.7 13.1 172 3-197 213-392 (404)
4 KOG1404|consensus 100.0 8.2E-40 1.8E-44 315.8 17.0 181 5-196 243-431 (442)
5 PRK07483 hypothetical protein; 100.0 9.9E-39 2.1E-43 320.3 18.5 187 4-197 230-431 (443)
6 PRK05965 hypothetical protein; 100.0 1.1E-38 2.3E-43 321.3 18.0 187 4-197 245-441 (459)
7 PRK07482 hypothetical protein; 100.0 2.1E-38 4.6E-43 319.3 18.2 189 4-197 250-448 (461)
8 PRK07678 aminotransferase; Val 100.0 3.6E-38 7.9E-43 316.8 18.5 189 4-197 243-443 (451)
9 PRK08742 adenosylmethionine--8 100.0 4.3E-38 9.3E-43 318.0 17.6 185 4-197 267-461 (472)
10 PRK07481 hypothetical protein; 100.0 6.4E-38 1.4E-42 314.8 17.0 187 4-197 243-439 (449)
11 PRK06938 diaminobutyrate--2-ox 100.0 6.9E-38 1.5E-42 315.9 17.0 181 4-197 261-454 (464)
12 PRK07030 adenosylmethionine--8 100.0 1.5E-37 3.2E-42 313.7 18.1 186 4-197 245-440 (466)
13 PRK06943 adenosylmethionine--8 100.0 2.6E-37 5.6E-42 310.9 17.7 181 4-197 252-440 (453)
14 PRK06931 diaminobutyrate--2-ox 100.0 3.1E-37 6.8E-42 310.7 17.6 181 4-197 255-448 (459)
15 PLN02760 4-aminobutyrate:pyruv 100.0 7.6E-37 1.6E-41 311.2 18.4 186 4-197 290-485 (504)
16 PRK06917 hypothetical protein; 100.0 8.2E-37 1.8E-41 306.7 17.7 188 3-197 229-431 (447)
17 PRK06082 4-aminobutyrate amino 100.0 8.3E-37 1.8E-41 307.7 17.5 187 4-205 258-452 (459)
18 PRK07480 putative aminotransfe 100.0 1.4E-36 2.9E-41 305.9 17.9 182 5-197 250-442 (456)
19 PRK07036 hypothetical protein; 100.0 1.5E-36 3.3E-41 306.3 17.9 185 5-197 251-446 (466)
20 TIGR03372 putres_am_tran putre 100.0 1.2E-36 2.5E-41 305.4 16.3 176 4-197 254-438 (442)
21 PRK06105 aminotransferase; Pro 100.0 2.2E-36 4.9E-41 304.5 18.2 186 4-197 248-443 (460)
22 PRK06916 adenosylmethionine--8 100.0 2.2E-36 4.7E-41 304.6 17.6 186 4-197 254-449 (460)
23 PRK06062 hypothetical protein; 100.0 1.8E-36 4E-41 304.5 16.8 182 4-197 244-439 (451)
24 PRK12403 putative aminotransfe 100.0 3.6E-36 7.8E-41 303.0 18.0 191 4-205 252-453 (460)
25 KOG1402|consensus 100.0 2.1E-36 4.6E-41 287.0 12.1 175 5-197 238-421 (427)
26 PRK11522 putrescine--2-oxoglut 100.0 9E-36 2E-40 300.2 16.6 176 4-197 261-445 (459)
27 PRK06058 4-aminobutyrate amino 100.0 1.7E-35 3.6E-40 296.6 17.4 180 4-197 249-436 (443)
28 PRK06148 hypothetical protein; 100.0 1.1E-35 2.5E-40 323.4 17.5 182 4-197 814-1004(1013)
29 TIGR00709 dat 2,4-diaminobutyr 100.0 1.5E-35 3.4E-40 296.9 17.1 180 5-197 237-429 (442)
30 PLN02974 adenosylmethionine-8- 100.0 1.9E-35 4E-40 314.2 17.6 185 4-197 615-812 (817)
31 PRK05639 4-aminobutyrate amino 100.0 1.7E-34 3.7E-39 290.8 17.5 178 4-197 252-437 (457)
32 PRK05630 adenosylmethionine--8 100.0 1.4E-34 3E-39 288.7 15.2 176 4-197 231-414 (422)
33 PRK07986 adenosylmethionine--8 100.0 1.2E-34 2.6E-39 289.7 14.2 176 3-197 234-417 (428)
34 PRK06149 hypothetical protein; 100.0 2.5E-34 5.5E-39 312.1 17.7 181 5-197 775-964 (972)
35 PRK06541 hypothetical protein; 100.0 9.1E-34 2E-38 285.7 18.4 186 4-197 251-449 (460)
36 PRK06173 adenosylmethionine--8 100.0 1.1E-33 2.4E-38 282.8 15.5 176 3-197 236-419 (429)
37 PRK13360 omega amino acid--pyr 100.0 2.2E-33 4.9E-38 281.5 16.1 182 4-197 245-434 (442)
38 PRK09221 beta alanine--pyruvat 100.0 3.6E-33 7.8E-38 280.3 15.8 182 4-197 248-437 (445)
39 PRK07495 4-aminobutyrate amino 100.0 7.6E-33 1.7E-37 276.3 17.6 180 4-197 228-415 (425)
40 PRK08593 4-aminobutyrate amino 100.0 6.9E-33 1.5E-37 278.1 16.8 179 4-197 237-423 (445)
41 PRK03715 argD acetylornithine 100.0 1.1E-31 2.5E-36 265.4 14.2 168 4-197 209-387 (395)
42 PRK09792 4-aminobutyrate trans 100.0 2.8E-31 6.1E-36 264.5 16.7 179 5-197 229-415 (421)
43 PRK05769 4-aminobutyrate amino 100.0 5E-31 1.1E-35 264.4 16.8 176 4-197 251-433 (441)
44 PRK06777 4-aminobutyrate amino 100.0 1.1E-30 2.4E-35 260.2 17.6 180 4-197 228-415 (421)
45 KOG1403|consensus 100.0 6.5E-31 1.4E-35 247.5 14.9 179 7-196 242-430 (452)
46 TIGR02407 ectoine_ectB diamino 100.0 6.9E-31 1.5E-35 261.1 15.5 172 4-197 224-406 (412)
47 PRK08117 4-aminobutyrate amino 100.0 1.4E-30 3E-35 259.9 17.0 180 3-197 236-423 (433)
48 PRK04013 argD acetylornithine/ 100.0 5.7E-31 1.2E-35 258.3 13.5 155 4-197 192-354 (364)
49 PRK04612 argD acetylornithine 100.0 2.3E-30 4.9E-35 257.3 15.7 173 4-197 217-397 (408)
50 PRK05964 adenosylmethionine--8 100.0 4E-30 8.7E-35 255.8 15.9 179 4-197 230-416 (423)
51 PRK08360 4-aminobutyrate amino 100.0 7.9E-30 1.7E-34 256.0 17.4 179 4-197 234-420 (443)
52 PRK08297 L-lysine aminotransfe 100.0 5.6E-30 1.2E-34 257.1 15.7 173 3-197 254-435 (443)
53 TIGR00508 bioA adenosylmethion 100.0 6E-30 1.3E-34 255.6 15.8 175 4-197 238-420 (427)
54 TIGR00699 GABAtrns_euk 4-amino 100.0 3.8E-30 8.3E-35 259.6 13.4 167 3-197 280-460 (464)
55 TIGR00700 GABAtrnsam 4-aminobu 100.0 1.6E-29 3.4E-34 251.6 17.2 180 4-197 227-414 (420)
56 PRK12389 glutamate-1-semialdeh 100.0 8.7E-30 1.9E-34 254.3 15.4 179 4-197 230-421 (428)
57 TIGR03246 arg_catab_astC succi 100.0 1.7E-29 3.7E-34 249.2 15.8 173 4-197 209-389 (397)
58 PRK06918 4-aminobutyrate amino 100.0 3.5E-29 7.6E-34 251.4 17.2 182 3-197 248-437 (451)
59 PRK09264 diaminobutyrate--2-ox 100.0 4.3E-29 9.3E-34 249.0 14.9 172 4-197 228-410 (425)
60 PLN00144 acetylornithine trans 100.0 9.6E-29 2.1E-33 243.4 15.8 170 4-197 197-374 (382)
61 KOG1401|consensus 100.0 8.3E-29 1.8E-33 240.9 12.8 176 4-197 236-424 (433)
62 PRK07046 aminotransferase; Val 100.0 3.3E-28 7.2E-33 245.0 17.6 183 4-197 248-444 (453)
63 TIGR03251 LAT_fam L-lysine 6-t 100.0 1.9E-28 4.2E-33 244.9 14.9 173 3-197 247-428 (431)
64 PF00202 Aminotran_3: Aminotra 100.0 5.3E-29 1.1E-33 241.8 10.2 123 5-136 208-338 (339)
65 COG0001 HemL Glutamate-1-semia 100.0 2.8E-28 6E-33 240.8 13.9 180 2-197 228-422 (432)
66 PRK12381 bifunctional succinyl 100.0 1.1E-27 2.4E-32 237.1 16.1 174 3-197 212-393 (406)
67 PRK00615 glutamate-1-semialdeh 100.0 1.2E-27 2.6E-32 239.7 15.4 185 4-204 231-428 (433)
68 PLN02482 glutamate-1-semialdeh 99.9 1.5E-27 3.2E-32 241.6 14.9 177 3-197 275-467 (474)
69 PLN02624 ornithine-delta-amino 99.9 6.3E-27 1.4E-31 236.8 16.5 177 3-197 253-438 (474)
70 PRK03244 argD acetylornithine 99.9 5E-26 1.1E-30 223.4 15.8 167 5-197 214-388 (398)
71 PRK01278 argD acetylornithine 99.9 1.9E-25 4E-30 218.9 14.8 169 4-197 205-382 (389)
72 PRK06209 glutamate-1-semialdeh 99.9 1.7E-25 3.6E-30 223.8 13.9 176 4-197 213-399 (431)
73 PRK00062 glutamate-1-semialdeh 99.9 6.3E-25 1.4E-29 219.0 16.8 179 4-197 227-418 (426)
74 PRK04073 rocD ornithine--oxo-a 99.9 6.1E-25 1.3E-29 216.3 15.5 167 5-197 217-391 (396)
75 TIGR01885 Orn_aminotrans ornit 99.9 1.1E-24 2.3E-29 214.8 15.4 173 4-197 216-396 (401)
76 PRK08088 4-aminobutyrate amino 99.9 2.6E-24 5.7E-29 214.3 17.6 181 4-197 229-417 (425)
77 TIGR00713 hemL glutamate-1-sem 99.9 2.1E-24 4.5E-29 214.1 15.6 179 4-197 225-416 (423)
78 PTZ00125 ornithine aminotransf 99.9 1.9E-23 4E-28 204.8 16.0 174 4-197 208-389 (400)
79 PRK02936 argD acetylornithine 99.9 2.7E-23 5.9E-28 202.4 15.2 169 4-197 197-373 (377)
80 PRK00854 rocD ornithine--oxo-a 99.9 4.4E-23 9.6E-28 202.7 15.1 171 4-197 217-395 (401)
81 PRK04260 acetylornithine amino 99.9 4.9E-23 1.1E-27 201.1 15.2 169 4-197 195-371 (375)
82 PRK05093 argD bifunctional N-s 99.9 2.1E-22 4.5E-27 198.8 15.7 174 3-197 213-394 (403)
83 PRK02627 acetylornithine amino 99.9 3.4E-22 7.4E-27 195.2 15.5 168 5-197 213-388 (396)
84 cd00610 OAT_like Acetyl ornith 99.9 1.4E-21 3.1E-26 191.4 16.2 181 4-197 221-409 (413)
85 KOG1405|consensus 99.8 4.2E-19 9E-24 170.8 10.3 167 2-197 299-477 (484)
86 PLN03227 serine palmitoyltrans 99.7 3.3E-17 7.1E-22 162.1 11.0 182 4-197 164-376 (392)
87 TIGR00707 argD acetylornithine 99.7 1.5E-16 3.3E-21 154.3 15.5 167 5-197 201-375 (379)
88 PRK07505 hypothetical protein; 99.5 8.8E-14 1.9E-18 137.3 13.5 168 5-197 206-393 (402)
89 PLN02822 serine palmitoyltrans 99.4 2.9E-12 6.3E-17 130.4 12.9 174 3-197 270-471 (481)
90 PRK13393 5-aminolevulinate syn 99.3 1.4E-11 3.1E-16 121.8 14.2 162 5-197 204-390 (406)
91 PRK09064 5-aminolevulinate syn 99.2 1.1E-10 2.4E-15 115.1 14.4 164 5-197 205-391 (407)
92 TIGR01821 5aminolev_synth 5-am 99.2 2.3E-10 4.9E-15 112.8 14.5 166 5-197 204-390 (402)
93 PRK07179 hypothetical protein; 99.2 2.6E-10 5.7E-15 112.7 13.5 167 5-197 208-392 (407)
94 TIGR01825 gly_Cac_T_rel pyrido 98.9 2.7E-08 5.8E-13 96.9 14.3 166 5-197 190-375 (385)
95 PRK05958 8-amino-7-oxononanoat 98.9 5.6E-08 1.2E-12 94.1 14.7 166 5-197 195-381 (385)
96 PLN02955 8-amino-7-oxononanoat 98.8 3.4E-08 7.5E-13 100.5 12.8 157 4-197 275-455 (476)
97 PRK06939 2-amino-3-ketobutyrat 98.7 2.3E-07 5E-12 90.3 14.5 169 4-197 200-387 (397)
98 PRK13392 5-aminolevulinate syn 98.7 1.8E-07 4E-12 92.6 13.6 166 5-197 205-391 (410)
99 TIGR00858 bioF 8-amino-7-oxono 98.7 5.1E-07 1.1E-11 86.3 14.8 166 5-197 173-359 (360)
100 PRK03317 histidinol-phosphate 98.7 3.2E-07 7E-12 89.3 13.0 158 8-197 190-358 (368)
101 PLN02483 serine palmitoyltrans 98.6 6E-07 1.3E-11 91.8 15.0 165 5-197 267-460 (489)
102 TIGR01822 2am3keto_CoA 2-amino 98.6 7E-07 1.5E-11 87.3 14.5 168 5-197 197-383 (393)
103 cd00609 AAT_like Aspartate ami 98.6 5.7E-07 1.2E-11 84.8 12.8 166 5-197 162-348 (350)
104 cd00613 GDC-P Glycine cleavage 98.4 2.3E-06 5E-11 83.7 11.2 170 5-196 186-397 (398)
105 PRK05937 8-amino-7-oxononanoat 98.4 5.2E-06 1.1E-10 81.3 12.8 158 6-197 171-344 (370)
106 PRK06225 aspartate aminotransf 98.3 1.1E-05 2.5E-10 78.8 14.9 166 5-197 187-370 (380)
107 COG0156 BioF 7-keto-8-aminopel 98.3 8.4E-06 1.8E-10 81.3 13.2 166 3-197 196-384 (388)
108 PRK13520 L-tyrosine decarboxyl 98.3 1.3E-05 2.7E-10 77.5 12.7 170 5-197 178-365 (371)
109 PRK08153 histidinol-phosphate 98.1 6.7E-05 1.4E-09 73.5 14.4 160 7-197 186-359 (369)
110 PRK02731 histidinol-phosphate 98.1 8E-05 1.7E-09 72.3 14.4 161 7-197 185-360 (367)
111 KOG1359|consensus 98.0 4.1E-05 8.9E-10 73.5 11.2 169 4-197 219-406 (417)
112 cd06454 KBL_like KBL_like; thi 98.0 0.00012 2.6E-09 69.9 14.3 167 5-197 159-345 (349)
113 TIGR01141 hisC histidinol-phos 98.0 0.00011 2.4E-09 70.6 14.0 157 7-197 173-345 (346)
114 cd06502 TA_like Low-specificit 98.0 8.5E-05 1.8E-09 70.7 11.7 164 5-197 156-335 (338)
115 TIGR01814 kynureninase kynuren 97.9 0.00018 3.9E-09 71.3 13.7 172 5-197 198-401 (406)
116 TIGR01140 L_thr_O3P_dcar L-thr 97.9 0.00025 5.4E-09 68.3 13.9 161 6-196 156-328 (330)
117 TIGR03301 PhnW-AepZ 2-aminoeth 97.9 0.00023 4.9E-09 68.0 13.5 171 5-197 152-351 (355)
118 PRK06108 aspartate aminotransf 97.8 0.00053 1.1E-08 66.7 14.3 165 5-197 188-376 (382)
119 PRK03158 histidinol-phosphate 97.7 0.00067 1.4E-08 65.7 13.5 159 7-197 182-355 (359)
120 PLN02721 threonine aldolase 97.7 0.00058 1.3E-08 65.4 12.8 162 5-197 168-346 (353)
121 PRK07324 transaminase; Validat 97.7 0.0011 2.3E-08 65.2 14.8 170 5-197 183-364 (373)
122 cd06451 AGAT_like Alanine-glyo 97.7 0.001 2.2E-08 64.1 14.2 172 5-197 151-351 (356)
123 cd06453 SufS_like Cysteine des 97.5 0.0025 5.5E-08 61.7 15.0 170 5-196 166-372 (373)
124 cd00616 AHBA_syn 3-amino-5-hyd 97.5 0.0017 3.7E-08 62.1 12.8 147 5-165 130-297 (352)
125 PRK03321 putative aminotransfe 97.5 0.0015 3.2E-08 63.1 12.5 156 7-197 176-345 (352)
126 TIGR03812 tyr_de_CO2_Arch tyro 97.5 0.0026 5.6E-08 61.6 13.9 81 97-197 290-370 (373)
127 PRK07682 hypothetical protein; 97.4 0.0021 4.7E-08 62.7 12.8 166 5-197 184-370 (378)
128 TIGR01976 am_tr_V_VC1184 cyste 97.4 0.0038 8.2E-08 61.1 14.2 170 5-196 183-396 (397)
129 PRK13034 serine hydroxymethylt 97.4 0.0025 5.5E-08 63.9 12.8 170 5-197 193-386 (416)
130 cd00378 SHMT Serine-glycine hy 97.4 0.0029 6.4E-08 62.1 12.9 172 5-197 186-379 (402)
131 PRK00950 histidinol-phosphate 97.3 0.0026 5.7E-08 61.4 12.2 157 6-197 186-356 (361)
132 PRK13580 serine hydroxymethylt 97.3 0.0046 9.9E-08 63.7 14.2 171 6-197 246-439 (493)
133 TIGR02539 SepCysS Sep-tRNA:Cys 97.3 0.0013 2.8E-08 64.4 9.8 178 5-197 173-362 (370)
134 PRK05764 aspartate aminotransf 97.3 0.0043 9.3E-08 60.8 12.7 175 5-197 194-385 (393)
135 PRK07550 hypothetical protein; 97.2 0.0075 1.6E-07 59.1 14.1 167 5-197 193-381 (386)
136 PRK00011 glyA serine hydroxyme 97.2 0.0053 1.2E-07 60.8 13.1 173 5-197 190-383 (416)
137 PRK06959 putative threonine-ph 97.2 0.0064 1.4E-07 59.0 13.0 158 6-197 161-327 (339)
138 PRK06425 histidinol-phosphate 97.1 0.012 2.6E-07 56.7 13.9 157 6-197 153-327 (332)
139 TIGR03392 FeS_syn_CsdA cystein 97.1 0.015 3.3E-07 57.1 14.6 166 5-197 184-389 (398)
140 PRK09105 putative aminotransfe 97.0 0.012 2.5E-07 57.9 13.3 159 7-197 196-364 (370)
141 PF00155 Aminotran_1_2: Aminot 97.0 0.008 1.7E-07 57.8 11.7 164 6-196 179-362 (363)
142 TIGR01979 sufS cysteine desulf 97.0 0.017 3.6E-07 56.8 14.2 165 6-197 187-395 (403)
143 PRK14809 histidinol-phosphate 97.0 0.018 3.9E-07 55.8 14.1 153 7-197 185-351 (357)
144 PRK09331 Sep-tRNA:Cys-tRNA syn 97.0 0.0091 2E-07 58.9 11.9 181 4-197 184-375 (387)
145 PRK10874 cysteine sulfinate de 96.9 0.024 5.2E-07 55.8 14.7 166 5-197 187-392 (401)
146 TIGR03402 FeS_nifS cysteine de 96.9 0.0089 1.9E-07 58.3 11.0 167 5-197 163-366 (379)
147 PRK05664 threonine-phosphate d 96.9 0.02 4.3E-07 55.2 13.2 159 6-197 155-322 (330)
148 TIGR02326 transamin_PhnW 2-ami 96.9 0.034 7.4E-07 53.9 14.9 174 5-197 156-356 (363)
149 PRK09295 bifunctional cysteine 96.8 0.038 8.2E-07 54.6 15.2 165 5-197 191-398 (406)
150 TIGR03576 pyridox_MJ0158 pyrid 96.8 0.011 2.3E-07 58.0 11.1 162 5-197 165-341 (346)
151 PRK05387 histidinol-phosphate 96.8 0.027 5.9E-07 54.2 13.6 160 6-197 173-347 (353)
152 PRK06358 threonine-phosphate d 96.7 0.031 6.7E-07 54.4 13.1 163 6-197 172-349 (354)
153 PTZ00094 serine hydroxymethylt 96.7 0.018 3.8E-07 58.4 11.6 175 6-197 208-402 (452)
154 cd06452 SepCysS Sep-tRNA:Cys-t 96.7 0.014 3E-07 56.8 10.4 176 5-197 166-356 (361)
155 PRK14808 histidinol-phosphate 96.7 0.051 1.1E-06 52.6 14.3 156 7-197 166-331 (335)
156 PRK07908 hypothetical protein; 96.6 0.035 7.6E-07 53.7 13.0 157 7-197 167-341 (349)
157 PRK04635 histidinol-phosphate 96.6 0.033 7E-07 54.1 12.7 160 7-197 177-349 (354)
158 PRK07568 aspartate aminotransf 96.6 0.064 1.4E-06 52.6 14.5 167 6-197 193-386 (397)
159 PLN02855 Bifunctional selenocy 96.6 0.059 1.3E-06 53.7 14.3 170 5-197 200-412 (424)
160 PLN03026 histidinol-phosphate 96.5 0.052 1.1E-06 53.5 13.7 161 9-197 205-376 (380)
161 PRK07865 N-succinyldiaminopime 96.5 0.067 1.5E-06 52.0 14.0 167 5-197 178-362 (364)
162 PRK15481 transcriptional regul 96.5 0.059 1.3E-06 53.8 13.8 163 8-197 246-425 (431)
163 PRK10534 L-threonine aldolase; 96.5 0.027 5.9E-07 53.8 10.9 158 6-197 158-327 (333)
164 PRK01688 histidinol-phosphate 96.4 0.035 7.7E-07 54.0 11.7 159 8-197 177-350 (351)
165 PF00266 Aminotran_5: Aminotra 96.4 0.11 2.4E-06 50.5 15.2 161 6-193 167-371 (371)
166 PRK06348 aspartate aminotransf 96.4 0.068 1.5E-06 52.5 13.5 170 5-197 192-379 (384)
167 PRK06290 aspartate aminotransf 96.4 0.04 8.7E-07 55.1 11.8 177 5-197 209-399 (410)
168 PRK06207 aspartate aminotransf 96.3 0.082 1.8E-06 52.5 13.9 170 6-197 209-396 (405)
169 PRK02948 cysteine desulfurase; 96.3 0.036 7.7E-07 54.1 10.9 167 5-197 165-368 (381)
170 PRK04781 histidinol-phosphate 96.2 0.1 2.2E-06 51.1 13.7 160 7-197 183-357 (364)
171 PRK02610 histidinol-phosphate 96.2 0.14 3.1E-06 50.1 14.6 161 6-197 197-365 (374)
172 PRK08960 hypothetical protein; 96.2 0.097 2.1E-06 51.4 13.5 168 5-196 195-380 (387)
173 PLN00175 aminotransferase fami 96.2 0.098 2.1E-06 52.2 13.7 171 5-197 217-407 (413)
174 TIGR03537 DapC succinyldiamino 96.2 0.095 2.1E-06 50.7 12.9 168 5-197 166-347 (350)
175 PRK13479 2-aminoethylphosphona 96.1 0.13 2.8E-06 49.9 13.7 173 6-197 159-357 (368)
176 PRK07777 aminotransferase; Val 96.1 0.086 1.9E-06 51.7 12.5 166 6-197 190-380 (387)
177 PRK07681 aspartate aminotransf 96.1 0.11 2.4E-06 51.3 13.3 169 5-197 196-382 (399)
178 TIGR03539 DapC_actino succinyl 96.1 0.13 2.8E-06 50.0 13.5 166 5-196 172-355 (357)
179 TIGR03540 DapC_direct LL-diami 96.1 0.15 3.2E-06 49.8 13.9 166 6-196 195-379 (383)
180 PRK08056 threonine-phosphate d 95.9 0.16 3.5E-06 49.3 13.5 162 6-197 173-349 (356)
181 PRK09082 methionine aminotrans 95.9 0.13 2.9E-06 50.5 12.9 172 5-197 193-383 (386)
182 cd00611 PSAT_like Phosphoserin 95.8 0.087 1.9E-06 51.5 11.1 171 5-197 160-350 (355)
183 PRK08912 hypothetical protein; 95.8 0.22 4.8E-06 48.8 13.8 172 5-197 189-380 (387)
184 PRK14807 histidinol-phosphate 95.7 0.31 6.7E-06 47.3 14.3 158 8-197 178-346 (351)
185 PRK03080 phosphoserine aminotr 95.7 0.32 7E-06 47.9 14.6 174 5-197 161-367 (378)
186 PLN02409 serine--glyoxylate am 95.7 0.24 5.2E-06 49.2 13.6 174 4-197 165-366 (401)
187 PRK04870 histidinol-phosphate 95.7 0.18 3.9E-06 48.8 12.4 160 8-197 183-352 (356)
188 COG0079 HisC Histidinol-phosph 95.7 0.3 6.5E-06 48.3 14.1 155 8-197 177-348 (356)
189 PRK07392 threonine-phosphate d 95.7 0.2 4.3E-06 48.7 12.7 148 7-177 177-339 (360)
190 PRK09276 LL-diaminopimelate am 95.6 0.28 6.1E-06 48.0 13.8 168 5-197 196-382 (385)
191 PLN02376 1-aminocyclopropane-1 95.6 0.28 6E-06 50.6 14.1 174 6-197 230-432 (496)
192 TIGR01977 am_tr_V_EF2568 cyste 95.6 0.31 6.7E-06 47.1 13.7 87 97-197 272-373 (376)
193 PRK08175 aminotransferase; Val 95.5 0.28 6.2E-06 48.3 13.5 171 5-197 194-383 (395)
194 PRK08068 transaminase; Reviewe 95.5 0.21 4.6E-06 49.0 12.5 168 5-197 197-383 (389)
195 cd06450 DOPA_deC_like DOPA dec 95.4 0.29 6.2E-06 46.7 12.8 90 97-197 250-342 (345)
196 PRK08361 aspartate aminotransf 95.4 0.23 5E-06 48.8 12.3 168 6-197 197-384 (391)
197 PRK05166 histidinol-phosphate 95.4 0.25 5.5E-06 48.2 12.5 162 7-197 190-365 (371)
198 PRK01533 histidinol-phosphate 95.4 0.16 3.6E-06 49.8 11.1 153 9-197 184-349 (366)
199 PRK07366 succinyldiaminopimela 95.4 0.23 5.1E-06 48.6 12.2 171 5-197 195-384 (388)
200 PRK07582 cystathionine gamma-l 95.2 0.24 5.2E-06 48.8 11.8 114 6-136 160-300 (366)
201 PRK05942 aspartate aminotransf 95.1 0.59 1.3E-05 46.0 14.2 167 5-196 200-385 (394)
202 TIGR03403 nifS_epsilon cystein 95.0 0.57 1.2E-05 45.8 13.8 166 5-197 167-369 (382)
203 PRK09148 aminotransferase; Val 94.9 0.43 9.4E-06 47.3 12.8 171 6-197 196-384 (405)
204 PRK07309 aromatic amino acid a 94.9 0.41 8.9E-06 47.1 12.5 169 5-197 196-382 (391)
205 TIGR01437 selA_rel uncharacter 94.9 0.33 7.1E-06 47.7 11.7 167 5-197 176-359 (363)
206 PRK03967 histidinol-phosphate 94.9 0.27 5.9E-06 47.5 11.0 54 7-64 168-228 (337)
207 PRK06767 methionine gamma-lyas 94.8 0.11 2.4E-06 51.5 8.2 138 5-166 173-330 (386)
208 cd00614 CGS_like CGS_like: Cys 94.8 0.11 2.5E-06 50.9 8.2 114 5-136 152-293 (369)
209 PRK12414 putative aminotransfe 94.8 0.56 1.2E-05 46.1 13.0 170 6-197 193-381 (384)
210 PRK05957 aspartate aminotransf 94.8 0.63 1.4E-05 45.8 13.4 171 5-197 190-379 (389)
211 KOG1357|consensus 94.7 0.15 3.3E-06 51.9 8.7 56 4-63 302-367 (519)
212 PLN03226 serine hydroxymethylt 94.6 0.33 7.2E-06 49.9 11.3 90 97-197 316-413 (475)
213 PRK08636 aspartate aminotransf 94.6 0.58 1.3E-05 46.3 12.7 172 5-197 205-394 (403)
214 PLN02607 1-aminocyclopropane-1 94.6 0.6 1.3E-05 47.4 13.0 174 5-197 230-431 (447)
215 COG0520 csdA Selenocysteine ly 94.5 0.69 1.5E-05 46.6 13.1 171 5-197 189-399 (405)
216 PRK07683 aminotransferase A; V 94.5 0.71 1.5E-05 45.4 13.0 168 6-197 192-377 (387)
217 PRK08354 putative aminotransfe 94.5 0.9 1.9E-05 43.3 13.2 148 6-197 148-306 (311)
218 PRK05355 3-phosphoserine/phosp 94.4 0.39 8.4E-06 47.3 10.9 170 7-197 165-352 (360)
219 COG1167 ARO8 Transcriptional r 94.4 1.2 2.5E-05 45.6 14.5 173 4-197 256-449 (459)
220 PLN02651 cysteine desulfurase 94.3 0.25 5.4E-06 48.1 9.3 101 5-113 165-277 (364)
221 PRK08363 alanine aminotransfer 94.2 1.1 2.4E-05 44.2 13.6 176 5-197 196-388 (398)
222 KOG1360|consensus 94.2 1 2.2E-05 45.6 13.0 167 2-197 327-518 (570)
223 PRK09440 avtA valine--pyruvate 94.1 0.81 1.8E-05 45.3 12.6 169 5-197 209-405 (416)
224 KOG1358|consensus 93.9 0.069 1.5E-06 53.4 4.4 175 5-197 260-459 (467)
225 PRK13238 tnaA tryptophanase/L- 93.9 1.3 2.8E-05 45.3 13.9 137 47-197 264-427 (460)
226 PRK06460 hypothetical protein; 93.7 0.72 1.6E-05 45.7 11.3 115 5-136 157-297 (376)
227 PRK05839 hypothetical protein; 93.7 1.1 2.5E-05 43.8 12.6 163 5-197 185-368 (374)
228 PLN02450 1-aminocyclopropane-1 93.7 1.2 2.6E-05 45.4 13.1 174 6-197 222-424 (468)
229 PRK07590 L,L-diaminopimelate a 93.6 1.7 3.7E-05 43.0 13.8 172 5-197 206-405 (409)
230 PRK06836 aspartate aminotransf 93.4 1.1 2.3E-05 44.3 11.8 164 7-197 206-385 (394)
231 TIGR01364 serC_1 phosphoserine 93.2 1.8 3.8E-05 42.5 13.1 173 5-197 152-342 (349)
232 TIGR03538 DapC_gpp succinyldia 92.9 2.9 6.3E-05 41.1 14.1 162 6-197 196-389 (393)
233 TIGR01325 O_suc_HS_sulf O-succ 92.9 0.23 4.9E-06 49.2 6.2 53 5-63 166-224 (380)
234 PRK05968 hypothetical protein; 92.8 0.94 2E-05 45.0 10.6 137 5-166 174-331 (389)
235 PRK09147 succinyldiaminopimela 92.6 2.6 5.6E-05 41.5 13.3 163 5-197 196-390 (396)
236 PRK04366 glycine dehydrogenase 92.5 1.6 3.4E-05 44.8 12.0 177 5-197 235-442 (481)
237 COG0436 Aspartate/tyrosine/aro 92.4 2.2 4.8E-05 42.7 12.6 165 5-197 193-385 (393)
238 TIGR02006 IscS cysteine desulf 92.3 2.2 4.9E-05 42.1 12.5 49 5-60 169-222 (402)
239 PTZ00433 tyrosine aminotransfe 92.3 3.9 8.5E-05 40.6 14.2 173 6-197 208-402 (412)
240 PLN02242 methionine gamma-lyas 92.0 0.37 8E-06 48.6 6.6 130 5-158 190-347 (418)
241 PRK07337 aminotransferase; Val 92.0 3.2 7E-05 40.6 13.2 172 6-197 194-383 (388)
242 TIGR03542 DAPAT_plant LL-diami 91.8 5.6 0.00012 39.3 14.7 52 6-59 204-265 (402)
243 PRK07049 methionine gamma-lyas 91.6 1.8 3.8E-05 43.8 10.9 50 7-63 209-265 (427)
244 PRK08249 cystathionine gamma-s 91.2 1 2.2E-05 45.1 8.7 53 5-63 176-234 (398)
245 PRK07504 O-succinylhomoserine 91.2 0.78 1.7E-05 45.8 7.8 114 5-136 177-318 (398)
246 TIGR01366 serC_3 phosphoserine 90.9 3.6 7.7E-05 40.5 12.1 171 5-197 152-354 (361)
247 PRK07810 O-succinylhomoserine 90.8 0.8 1.7E-05 45.9 7.6 114 5-136 182-323 (403)
248 PLN02452 phosphoserine transam 90.0 1.9 4.1E-05 42.8 9.3 168 8-197 170-357 (365)
249 PTZ00376 aspartate aminotransf 89.4 2.7 5.8E-05 41.7 9.9 57 5-62 206-276 (404)
250 PRK08045 cystathionine gamma-s 88.6 3.9 8.4E-05 40.7 10.5 51 6-62 165-222 (386)
251 TIGR01264 tyr_amTase_E tyrosin 88.6 11 0.00024 37.0 13.7 173 5-197 198-393 (401)
252 PRK09265 aminotransferase AlaT 88.5 12 0.00025 37.0 13.7 180 5-197 198-395 (404)
253 PRK06107 aspartate aminotransf 88.4 6.9 0.00015 38.6 12.1 176 8-197 200-394 (402)
254 PLN00143 tyrosine/nicotianamin 88.2 8.6 0.00019 38.2 12.6 174 5-197 200-398 (409)
255 PF12897 Aminotran_MocR: Alani 88.1 7.2 0.00016 39.4 11.7 135 39-196 253-408 (425)
256 PRK08776 cystathionine gamma-s 88.0 4.9 0.00011 40.3 10.8 53 5-63 172-231 (405)
257 PRK06855 aminotransferase; Val 87.6 8.7 0.00019 38.6 12.4 48 5-54 201-257 (433)
258 PRK07811 cystathionine gamma-s 87.5 3.1 6.7E-05 41.4 9.0 52 5-62 173-231 (388)
259 PRK13355 bifunctional HTH-doma 87.4 8.3 0.00018 39.7 12.3 40 153-197 465-508 (517)
260 PLN02724 Molybdenum cofactor s 86.8 19 0.00041 39.5 15.2 172 9-197 231-482 (805)
261 PRK14012 cysteine desulfurase; 86.7 3.3 7.3E-05 40.8 8.7 48 5-59 171-223 (404)
262 PLN02187 rooty/superroot1 86.2 15 0.00033 37.4 13.3 178 5-197 234-432 (462)
263 TIGR02080 O_succ_thio_ly O-suc 85.1 8.2 0.00018 38.3 10.6 52 6-63 164-222 (382)
264 PRK07269 cystathionine gamma-s 84.8 3.3 7.2E-05 40.9 7.5 114 5-136 163-288 (364)
265 PLN02656 tyrosine transaminase 84.6 15 0.00032 36.5 12.1 175 5-197 199-397 (409)
266 PRK07050 cystathionine beta-ly 84.4 2.4 5.2E-05 42.3 6.4 53 5-63 177-236 (394)
267 KOG1368|consensus 84.1 12 0.00027 36.7 10.7 136 38-198 223-363 (384)
268 PRK08133 O-succinylhomoserine 84.1 2.6 5.7E-05 41.9 6.5 53 5-63 173-231 (390)
269 PRK05367 glycine dehydrogenase 83.9 4.4 9.6E-05 45.3 8.7 62 150-214 824-888 (954)
270 PTZ00377 alanine aminotransfer 82.6 38 0.00082 34.5 14.4 39 154-197 426-469 (481)
271 PRK08637 hypothetical protein; 82.2 31 0.00068 33.8 13.2 170 7-197 183-380 (388)
272 TIGR01328 met_gam_lyase methio 82.0 3.7 8E-05 40.9 6.6 53 5-63 171-229 (391)
273 PRK08574 cystathionine gamma-s 81.8 3.2 7E-05 41.2 6.1 52 5-63 164-223 (385)
274 PRK00451 glycine dehydrogenase 81.6 32 0.00069 34.4 13.3 44 151-197 394-442 (447)
275 TIGR01324 cysta_beta_ly_B cyst 81.6 3.3 7.1E-05 41.2 6.1 53 5-63 162-220 (377)
276 KOG2862|consensus 81.5 19 0.00042 35.6 10.9 180 3-197 168-376 (385)
277 PRK08247 cystathionine gamma-s 80.6 6.6 0.00014 38.5 7.8 113 5-136 163-288 (366)
278 TIGR03588 PseC UDP-4-keto-6-de 79.1 38 0.00082 33.1 12.6 63 97-166 261-325 (380)
279 TIGR01265 tyr_nico_aTase tyros 79.0 54 0.0012 32.3 13.8 172 5-197 199-395 (403)
280 PRK11658 UDP-4-amino-4-deoxy-L 78.7 4.9 0.00011 39.6 6.2 149 5-165 145-321 (379)
281 PLN02509 cystathionine beta-ly 77.6 6.5 0.00014 40.4 6.9 107 5-128 244-359 (464)
282 PRK07503 methionine gamma-lyas 77.5 6.5 0.00014 39.3 6.7 53 5-63 177-235 (403)
283 TIGR02379 ECA_wecE TDP-4-keto- 76.9 21 0.00046 35.3 10.2 147 5-166 143-319 (376)
284 PLN02397 aspartate transaminas 76.8 19 0.00042 36.0 9.9 55 5-60 224-292 (423)
285 TIGR01329 cysta_beta_ly_E cyst 75.7 17 0.00036 36.0 9.1 53 5-63 158-217 (378)
286 PRK06234 methionine gamma-lyas 75.2 9.3 0.0002 38.1 7.2 51 7-63 180-236 (400)
287 PRK11706 TDP-4-oxo-6-deoxy-D-g 73.9 20 0.00044 35.1 9.1 16 150-165 302-317 (375)
288 TIGR01326 OAH_OAS_sulfhy OAH/O 73.8 22 0.00047 35.7 9.4 46 5-56 169-219 (418)
289 PLN02672 methionine S-methyltr 72.8 66 0.0014 36.8 13.6 43 150-197 1029-1074(1082)
290 KOG0634|consensus 72.7 1E+02 0.0022 31.7 13.6 187 2-197 231-460 (472)
291 PLN02414 glycine dehydrogenase 70.0 55 0.0012 37.1 12.2 59 151-212 857-918 (993)
292 PRK09257 aromatic amino acid a 69.5 39 0.00084 33.2 10.0 48 5-53 202-259 (396)
293 PLN02231 alanine transaminase 69.0 75 0.0016 33.2 12.4 59 5-64 301-379 (534)
294 PRK05367 glycine dehydrogenase 66.8 91 0.002 35.2 13.1 43 150-197 394-436 (954)
295 PRK06084 O-acetylhomoserine am 65.9 16 0.00034 37.0 6.5 45 5-55 170-219 (425)
296 cd00615 Orn_deC_like Ornithine 65.0 7.2 0.00016 36.9 3.7 15 5-19 180-194 (294)
297 PRK15407 lipopolysaccharide bi 65.0 41 0.00089 34.1 9.3 76 83-165 295-375 (438)
298 COG2873 MET17 O-acetylhomoseri 64.7 44 0.00096 33.8 9.1 71 5-81 174-252 (426)
299 PRK06176 cystathionine gamma-s 63.2 39 0.00086 33.5 8.7 52 5-62 161-219 (380)
300 KOG0256|consensus 63.0 68 0.0015 32.9 10.1 160 4-177 255-439 (471)
301 PRK09028 cystathionine beta-ly 62.7 19 0.00041 36.1 6.3 53 5-63 173-231 (394)
302 TIGR03531 selenium_SpcS O-phos 62.5 65 0.0014 33.1 10.2 123 5-136 232-367 (444)
303 COG2008 GLY1 Threonine aldolas 62.5 59 0.0013 32.4 9.5 128 47-197 204-337 (342)
304 PRK05994 O-acetylhomoserine am 60.2 25 0.00054 35.5 6.7 45 5-55 175-224 (427)
305 PLN00145 tyrosine/nicotianamin 59.8 1.9E+02 0.0042 28.9 13.4 41 152-197 375-418 (430)
306 TIGR03799 NOD_PanD_pyr putativ 57.3 2E+02 0.0043 30.1 12.9 58 5-63 292-356 (522)
307 PRK12566 glycine dehydrogenase 56.6 1.3E+02 0.0028 34.0 11.8 59 151-212 826-887 (954)
308 KOG3846|consensus 55.9 1.1E+02 0.0025 30.4 10.0 91 92-197 347-455 (465)
309 TIGR00461 gcvP glycine dehydro 55.4 1E+02 0.0022 34.8 10.8 61 150-213 816-879 (939)
310 TIGR03235 DNA_S_dndA cysteine 48.9 38 0.00081 32.5 5.7 48 5-59 165-217 (353)
311 PLN02414 glycine dehydrogenase 48.7 1.8E+02 0.0039 33.1 11.5 42 151-197 422-463 (993)
312 COG0075 Serine-pyruvate aminot 46.0 67 0.0015 32.4 7.0 174 5-197 158-357 (383)
313 PRK06434 cystathionine gamma-l 44.9 90 0.002 31.2 7.8 109 11-136 179-308 (384)
314 PRK08248 O-acetylhomoserine am 44.5 1.4E+02 0.003 30.3 9.2 43 6-54 177-224 (431)
315 PF01053 Cys_Met_Meta_PP: Cys/ 44.4 2.2E+02 0.0047 28.6 10.5 114 6-137 168-311 (386)
316 PRK08861 cystathionine gamma-s 42.8 71 0.0015 31.9 6.7 50 6-62 166-223 (388)
317 PLN02368 alanine transaminase 41.8 95 0.0021 31.1 7.5 59 5-64 240-319 (407)
318 COG1104 NifS Cysteine sulfinat 41.5 95 0.0021 31.4 7.3 103 4-114 167-279 (386)
319 PRK07671 cystathionine beta-ly 41.3 66 0.0014 31.8 6.2 53 5-63 161-220 (377)
320 PRK05967 cystathionine beta-ly 40.6 64 0.0014 32.4 6.0 51 6-62 177-233 (395)
321 COG3977 Alanine-alpha-ketoisov 39.7 4E+02 0.0087 26.6 10.9 166 5-197 209-405 (417)
322 COG0626 MetC Cystathionine bet 38.7 2.3E+02 0.0049 28.8 9.5 52 5-62 176-234 (396)
323 PRK09275 aspartate aminotransf 37.4 4E+02 0.0086 28.0 11.4 47 6-57 274-328 (527)
324 PRK08114 cystathionine beta-ly 37.4 48 0.0011 33.3 4.6 50 8-63 179-234 (395)
325 PRK07812 O-acetylhomoserine am 34.5 2.8E+02 0.006 28.3 9.5 14 5-18 182-195 (436)
326 TIGR00461 gcvP glycine dehydro 32.2 4.2E+02 0.0091 30.1 11.1 43 150-197 383-425 (939)
327 COG1168 MalY Bifunctional PLP- 31.8 88 0.0019 31.6 5.2 125 3-136 186-327 (388)
328 PF00464 SHMT: Serine hydroxym 31.3 1.2E+02 0.0027 30.7 6.3 44 150-193 344-395 (399)
329 TIGR00474 selA seryl-tRNA(sec) 29.6 6.3E+02 0.014 25.9 12.8 54 5-63 242-309 (454)
330 PRK08064 cystathionine beta-ly 28.5 1.3E+02 0.0027 29.9 5.8 52 6-63 166-224 (390)
331 KOG0633|consensus 28.1 5.8E+02 0.013 25.0 9.8 167 8-196 191-370 (375)
332 COG0161 BioA Adenosylmethionin 27.0 58 0.0013 33.6 3.1 86 11-112 275-362 (449)
333 KOG0257|consensus 26.4 1.3E+02 0.0029 30.7 5.4 59 3-63 200-268 (420)
334 COG3033 TnaA Tryptophanase [Am 25.4 5.7E+02 0.012 26.2 9.5 110 83-197 314-438 (471)
335 TIGR01365 serC_2 phosphoserine 25.3 6.9E+02 0.015 24.9 11.5 177 7-197 154-367 (374)
336 PRK06702 O-acetylhomoserine am 22.7 4.6E+02 0.01 26.7 8.7 41 5-51 174-219 (432)
337 KOG3110|consensus 22.3 42 0.00091 29.2 1.0 48 10-58 13-60 (153)
338 COG3844 Kynureninase [Amino ac 21.9 8.3E+02 0.018 24.7 10.6 42 150-196 353-395 (407)
339 TIGR02618 tyr_phenol_ly tyrosi 20.9 2.3E+02 0.005 29.3 6.1 112 4-126 200-338 (450)
340 KOG4476|consensus 20.3 42 0.00091 31.7 0.6 18 6-23 45-62 (248)
341 COG5037 TOS9 Gluconate transpo 20.3 42 0.00091 31.7 0.6 18 6-23 45-62 (248)
342 COG1103 Archaea-specific pyrid 20.2 3E+02 0.0064 27.1 6.2 170 7-197 185-374 (382)
343 PRK05939 hypothetical protein; 20.0 1.8E+02 0.0038 29.1 5.0 44 5-54 158-206 (397)
No 1
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-44 Score=359.09 Aligned_cols=181 Identities=27% Similarity=0.392 Sum_probs=168.0
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
++-+||+|||+|||||||||||+|||+||+||+|| ++|+|+||+ |+|+|++++++|+ +. +..|++||
T Consensus 251 ~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~aK~ig~G~-Pl~avv~r~ei~~-~~--------~g~~~~Tf 320 (447)
T COG0160 251 LCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLAKSLGGGL-PLSAVVGRAEIMD-WP--------PGGHGGTF 320 (447)
T ss_pred HHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEecccccCCC-ceeEEeccHHhcc-cC--------CcccCCCC
Confidence 45679999999999999999999999999999999 689999995 9999999999998 43 36899999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
+|| ++|++++++ +++++ ++|++++|++|+++|++|+++||.|++|||+|+|+||||..++.+++| +.+.+.+++
T Consensus 321 ~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p-~~~~~~~i~ 399 (447)
T COG0160 321 GGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEP-DAELAAKIV 399 (447)
T ss_pred CcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCC-CHHHHHHHH
Confidence 999 999999999 98876 899999999999999999999999999999999999999987766655 457889999
Q ss_pred HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..|+++||++..||..+|++||.|||+| +++++|+.++++
T Consensus 400 ~~~~~~Glil~~~G~~~nviRi~PPL~i---s~e~~d~~l~il 439 (447)
T COG0160 400 ARAFERGLLLLTCGPHGNVLRILPPLTI---SDEELDEGLDIL 439 (447)
T ss_pred HHHHHcCCEEeccCCCCcEEEEeCCccc---CHHHHHHHHHHH
Confidence 9999999999999999999999999999 589999999986
No 2
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=2.2e-43 Score=350.58 Aligned_cols=185 Identities=23% Similarity=0.312 Sum_probs=170.3
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||||||+|||+|||||||++||+|++||+|| ++|+|+|||+|+||++++++|++.|.... ...+.||.||+
T Consensus 245 C~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~---~~~f~HG~TYs 321 (449)
T COG0161 245 CDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGD---AGAFMHGHTYS 321 (449)
T ss_pred HHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhccc---CCeeccCCccc
Confidence 4578999999999999999999999999999999 68999999999999999999999998521 44689999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
|| +|||+|+++ +++++ ++|++++|.+|.++|+++..+||.|++|||.|+|.+|||..++.++.||+.....++..
T Consensus 322 ghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~ 401 (449)
T COG0161 322 GNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRA 401 (449)
T ss_pred cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHH
Confidence 99 999999999 99986 89999999999999999777889999999999999999999988888885556788899
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.++++||+++|. ++++.++|||+| |++|||+++++.
T Consensus 402 ~~~e~Gl~iRp~---g~~i~~~PPlii---t~~eid~l~~~l 437 (449)
T COG0161 402 AALERGLLIRPL---GDVIYLMPPLII---TREEIDELVDAL 437 (449)
T ss_pred HHHHCCeEEeec---CCEEEEcCCccC---CHHHHHHHHHHH
Confidence 999999999995 689999999999 589999999985
No 3
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-42 Score=338.74 Aligned_cols=172 Identities=22% Similarity=0.343 Sum_probs=156.6
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+.-.||+|||+||||||+||||++||+||+||+|| ++|+|||| +|+||+++++++++.+. ++.||+||
T Consensus 213 lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tlaK~LgGG-~PigA~la~~~~~~~~~--------~G~HgSTf 283 (404)
T COG4992 213 LCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALGGG-FPIGAMLATEEIASAFT--------PGDHGSTF 283 (404)
T ss_pred HHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEeeccccCC-ccceeeEEchhhhhcCC--------CCcccCCC
Confidence 45678999999999999999999999999999999 68999999 59999999977777665 37999999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
+|| +||++++++ +++.+ +++++++|++|+++|+++..+||.+.+|||+|||+|++|..+. .+..++
T Consensus 284 GGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~---------~a~~~~ 354 (404)
T COG4992 284 GGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPY---------RARDIV 354 (404)
T ss_pred CcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcc---------cHHHHH
Confidence 999 999999999 88765 8999999999999999999999999999999999999997531 356799
Q ss_pred HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.|+++||++.+++ +|+|||+|||+| +++|||+.++++
T Consensus 355 ~~~~~~gvL~~~a~--~~ViR~~PpL~i---~~eei~~~~~~l 392 (404)
T COG4992 355 RALREEGVLVLPAG--PNVIRFLPPLVI---TEEEIDEALDAL 392 (404)
T ss_pred HHHHHCCeEEecCC--CCeEEecCCccC---CHHHHHHHHHHH
Confidence 99999999999875 689999999999 589999999975
No 4
>KOG1404|consensus
Probab=100.00 E-value=8.2e-40 Score=315.81 Aligned_cols=181 Identities=27% Similarity=0.409 Sum_probs=161.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
.++|.|+|+|||||||||||.||++|..||.|| |+|+|||| +|+|||++++||++.+.+ ...|..||+|
T Consensus 243 ~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGnG-~Pl~AVvtt~EIa~v~~~-------~~~~fnTygg 314 (442)
T KOG1404|consen 243 RKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGNG-FPLGAVVTTPEIADVLNQ-------KSSHFNTYGG 314 (442)
T ss_pred HHcCCEEEehhhhhccccccccccccccCCCccHHHHHhhccCC-CcceeeecCHHHHHHHHh-------ccccccccCC
Confidence 468999999999999999999999999999999 68999999 599999999999999875 1348999999
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
| ++|++++++ +++++ .+++++.|++|+++|.++.++||+|++|||+|||+|+||.+++....|-.......+...
T Consensus 315 nP~a~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~ 394 (442)
T KOG1404|consen 315 NPVACAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQ 394 (442)
T ss_pred CchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHH
Confidence 9 999999999 99977 899999999999999999999999999999999999999987742222123456778999
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDC 196 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~ 196 (329)
|.++|+++...+..++++|+.||||| |++|||.+.+.
T Consensus 395 cke~Gvlvg~g~i~G~vfriaPPlci---T~edi~f~~~~ 431 (442)
T KOG1404|consen 395 CKELGVLVGKGGIHGNVFRIAPPLCI---TKEDIDFAVEY 431 (442)
T ss_pred HHHhCeeeecccccceEEEecCCeec---cHHHHHHHHHH
Confidence 99999999887778999999999999 58999777664
No 5
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=9.9e-39 Score=320.26 Aligned_cols=187 Identities=19% Similarity=0.239 Sum_probs=163.1
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||+|||+|||||||||||++|+++++||+|| ++|+|+|||+|+||+++++++++.+.. . ...+.|++||+
T Consensus 230 c~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~---~-~~~~~h~~T~~ 305 (443)
T PRK07483 230 CDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIAD---G-SGFFQHGHTYL 305 (443)
T ss_pred HHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHHHhc---C-CCccccCCCCC
Confidence 4578999999999999999999999999999999 689999998899999999999998863 1 01257999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTHI 153 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~~ 153 (329)
+| ++|++++++ +++++ +++++++|++|+++|++++++||.+.+|||.|+|++|+|..++..+.|++. .....+
T Consensus 306 gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~ 385 (443)
T PRK07483 306 GHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARI 385 (443)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHH
Confidence 99 999999999 99876 899999999999999999989999999999999999999765444444432 356778
Q ss_pred HHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
++.|+++||++.+++. .+++++|.|||++ |++|||++++++
T Consensus 386 ~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~i---t~~eid~~~~~l 431 (443)
T PRK07483 386 KREAMARGLMVYPMGGTIDGVRGDHVLLAPPFII---TAAQIDEIVERL 431 (443)
T ss_pred HHHHHHCCcEEEecCccccCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence 9999999999987642 3689999999999 589999999985
No 6
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=321.27 Aligned_cols=187 Identities=21% Similarity=0.232 Sum_probs=161.3
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||+|||+|||||||||||++|+++++||+|| ++|+|+|||+|+||+++++++|+.+.+. ......+.|++||+
T Consensus 245 c~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~-~~~~~~~~h~~T~~ 323 (459)
T PRK05965 245 CRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADG-AGAAAPVGHGYTYS 323 (459)
T ss_pred HHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhcc-ccccccccccCCCC
Confidence 3468999999999999999999999999999999 6899999988999999999999988631 11111257999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTHI 153 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~~ 153 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++. +||.+.+|||.|+|++|+|..++..+.+++. .....+
T Consensus 324 gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i 402 (459)
T PRK05965 324 AHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALR-AHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRI 402 (459)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc-cCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHH
Confidence 99 999999999 99976 8999999999999999986 5999999999999999999765433334332 356788
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.|+++||++.++| .++|++.|||++ |++|||++++++
T Consensus 403 ~~~~~~~Gll~~~~g--~~~i~~~PpL~i---t~~ei~~~~~~l 441 (459)
T PRK05965 403 FDRAYANGLVFRAFG--DGVLGFAPALCC---TEGEFDLIFERT 441 (459)
T ss_pred HHHHHhCCeEEEecC--CcEEEEECCCcC---CHHHHHHHHHHH
Confidence 999999999998764 589999999999 589999999986
No 7
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=2.1e-38 Score=319.29 Aligned_cols=189 Identities=18% Similarity=0.232 Sum_probs=162.8
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||+|||+|||||||||||++|+++++||+|| ++|+|+|||+|+||+++++++|+.+... ......+.|++||+
T Consensus 250 c~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~-~~~~~~~~h~~T~~ 328 (461)
T PRK07482 250 LKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQG-SDEHGAIGHGWTYS 328 (461)
T ss_pred HHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcc-cccCCccccCCCCC
Confidence 4578999999999999999999999999999999 6899999988999999999999987631 11011357999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH--HHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR--HMTHI 153 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~--~~~~~ 153 (329)
|| ++|++++++ +++++ +++++++|++|+++|+++.++||.+.+|||.|+|++|+|..++..+.|++.. ....+
T Consensus 329 gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i 408 (461)
T PRK07482 329 GHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQV 408 (461)
T ss_pred cCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHH
Confidence 99 999999999 98876 8999999999999999999999999999999999999998654444555432 45788
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+..|+++||++.+. +.+++++|.|||++ |++|||++++++
T Consensus 409 ~~~~~~~Gvl~~~~-~~~~~i~~~Ppl~i---t~~ei~~~~~~l 448 (461)
T PRK07482 409 SAAALERGVIARAM-PHGDILGFAPPLVL---TRAEADEIVAIA 448 (461)
T ss_pred HHHHHHCCcEEecC-CCCCEEEEeCCCCC---CHHHHHHHHHHH
Confidence 99999999998653 23689999999999 589999999986
No 8
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=3.6e-38 Score=316.75 Aligned_cols=189 Identities=24% Similarity=0.380 Sum_probs=163.5
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||+|||+|||||||||||++|++|++||+|| ++|+|+||++|+||++++++||+.+.+ ......+.|++||+
T Consensus 243 c~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~--~~~~~~~~h~~T~~ 320 (451)
T PRK07678 243 CQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKG--KGEYEHFRHVNTFG 320 (451)
T ss_pred HHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhc--cCcccccccCCCCC
Confidence 4578999999999999999999999999999999 689999998899999999999998863 11111357999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++.++||.+.+|||.|+|++|+|..+.....|.+.+....++.
T Consensus 321 gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~ 400 (451)
T PRK07678 321 GNPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVA 400 (451)
T ss_pred cCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHH
Confidence 99 999999999 98876 89999999999999999888899999999999999999976543333434456778999
Q ss_pred HHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+.++ .+++++|.|||++ |++|||++++++
T Consensus 401 ~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~i---t~~eid~~~~~l 443 (451)
T PRK07678 401 ACKEKGLIIGKNGDTVAGYNNVLTLSPPLVI---SSEEIAFIVGTL 443 (451)
T ss_pred HHHHCCcEEeecCccccCCCCEEEEECCCcC---CHHHHHHHHHHH
Confidence 99999999987542 2589999999999 589999999986
No 9
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4.3e-38 Score=318.04 Aligned_cols=185 Identities=14% Similarity=0.216 Sum_probs=159.1
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||+|||+|||||||||||++|+++++||+|| ++|+|+|||+|+||++++++||+.+.. ......+.|++||+
T Consensus 267 c~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~--~~~~~~~~h~~T~~ 344 (472)
T PRK08742 267 CDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLD--DSRERAFLHSHSYT 344 (472)
T ss_pred HHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhc--cCccCccCcCCCCC
Confidence 3468999999999999999999999999999999 689999998899999999999998753 11112367999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTHI 153 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~~ 153 (329)
|| ++|++++++ +++++ +++++++|++|++.++.+ ++||.+.+|||.|+|++|+|..++..+.++.. .....+
T Consensus 345 gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~~-~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~ 423 (472)
T PRK08742 345 GNPLACAAALATLDIFADDDVIARNQPTAARMTQLAAQI-GEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHA 423 (472)
T ss_pred ccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-hcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHH
Confidence 99 999999999 99876 799999999999877776 56999999999999999999765544444432 245778
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...|+++||++.++ +|+|+|.|||+++ ++|||++++++
T Consensus 424 ~~~~~~~Gll~~~~---g~vi~~~PpL~it---~~ei~~~~~~l 461 (472)
T PRK08742 424 YRAALARGVVLRPL---GDVLYWMPPYCVD---EAQLALLADTT 461 (472)
T ss_pred HHHHHHCCeEEEec---CCEEEEECCCCCC---HHHHHHHHHHH
Confidence 89999999999875 4899999999994 79999999985
No 10
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=6.4e-38 Score=314.80 Aligned_cols=187 Identities=22% Similarity=0.313 Sum_probs=161.6
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-.||+|||+|||||||||||++|+++++||+|| ++|+|+|||+|+||+++++++|+.+.+. ......+.|++||+
T Consensus 243 c~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~-~~~~~~~~h~~T~~ 321 (449)
T PRK07481 243 CDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEAN-ADFGGAIMHGYTYS 321 (449)
T ss_pred HHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhcc-CccccccccCCCCC
Confidence 4568999999999999999999999999999999 6899999988999999999999988631 11112357999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC--hHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN--SRHMTHI 153 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~--~~~~~~~ 153 (329)
+| ++|++++++ +++++ +++++++|++|+++|++++++||.+.+|||.|+|++|+|..+...+.+++ ......+
T Consensus 322 gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~ 401 (449)
T PRK07481 322 GHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAV 401 (449)
T ss_pred CCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHH
Confidence 99 999999999 88876 89999999999999999999999999999999999999975543333433 2456788
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...|+++||++.++ +++++|.|||++ |++|||++++++
T Consensus 402 ~~~~~~~Gvl~~~~---g~~i~l~Ppl~i---t~~eid~~~~~l 439 (449)
T PRK07481 402 ADVARENGVLVRPS---GTKIILSPPLVI---QREDVDRIVDAL 439 (449)
T ss_pred HHHHHhCCeEEEec---CCEEEEECCCCC---CHHHHHHHHHHH
Confidence 89999999999885 367999999999 589999999985
No 11
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=6.9e-38 Score=315.92 Aligned_cols=181 Identities=24% Similarity=0.359 Sum_probs=157.5
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-.||+|||+|||||||||||.+|+++++||+|| ++|+|+|| +|+||+++++++ +.+. ...|++||+
T Consensus 261 c~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gKglggG-~PlsAv~~~~~~-~~~~--------~~~~~~T~~ 330 (464)
T PRK06938 261 TEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKAIGGS-LPLAVVVYREWL-DTWQ--------PGAHAGTFR 330 (464)
T ss_pred HHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEeeccccCC-CceEEEeehhHh-hccC--------CCCCCCCCC
Confidence 3468999999999999999999999999999999 68999999 599999999885 6553 256999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC-----CCCChHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK-----VPLNSRHM 150 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~-----~p~~~~~~ 150 (329)
|| ++|++++++ +++++ +++++++|++|+++|++++++||.+.+|||.|+|++|+|..++... .+.+....
T Consensus 331 gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~ 410 (464)
T PRK06938 331 GNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELA 410 (464)
T ss_pred cCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHH
Confidence 99 999999999 88866 8999999999999999999999999999999999999997543221 12123456
Q ss_pred HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..++..|+++||++.+++..+++|+|.|||++ |++|||++++++
T Consensus 411 ~~~~~~~~~~Gll~~~~g~~~~~l~~~Ppl~i---t~~eid~~~~~l 454 (464)
T PRK06938 411 SLIQRECLRRGLILELGGRHGSVVRFLPPLII---TAEQIDEVAEIF 454 (464)
T ss_pred HHHHHHHHHCCeEEeecCCCCCEEEEECCCcc---CHHHHHHHHHHH
Confidence 77899999999999876655799999999999 589999999986
No 12
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.5e-37 Score=313.66 Aligned_cols=186 Identities=18% Similarity=0.273 Sum_probs=160.3
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||+|||+|||||||||||++|+++++||+|| ++|+|+|||+|+||++++++||+.+... ......+.|++||+
T Consensus 245 c~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~-~~~~~~~~h~~T~~ 323 (466)
T PRK07030 245 CDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDD-YPTLRAFLHSHSYT 323 (466)
T ss_pred HHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcc-cccccccccCCCCC
Confidence 3468999999999999999999999999999999 6899999988999999999999988531 11112357999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTHI 153 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~~ 153 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++. +||.+.+|||+|+|++|+|..++..+.|+.. .....+
T Consensus 324 gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i 402 (466)
T PRK07030 324 GNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLA-DHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKV 402 (466)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-cCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHH
Confidence 99 999999999 98876 8999999999999999995 6999999999999999999765544444432 234678
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...|+++||++.++ +++++|.|||++ |++|||++++++
T Consensus 403 ~~~~~~~Gvl~~~~---g~~i~~~Ppl~i---t~~eid~~~~~l 440 (466)
T PRK07030 403 YQHALERGALLRPL---GSVVYFLPPYVI---TPEQIDFLAEVA 440 (466)
T ss_pred HHHHHHCCeEEEec---CCEEEEECCccC---CHHHHHHHHHHH
Confidence 99999999999875 479999999999 589999999986
No 13
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.6e-37 Score=310.89 Aligned_cols=181 Identities=15% Similarity=0.221 Sum_probs=157.1
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||+|||+|||||||||||++|+++++||+|| ++|+|+|||+|+||+++++++|+.+.. ......+.|++||+
T Consensus 252 c~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~--~~~~~~~~~~~T~~ 329 (453)
T PRK06943 252 CDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYD--DDVTRGFLHSHSYT 329 (453)
T ss_pred HHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcc--cCccCCccCCCCCC
Confidence 3468999999999999999999999999999999 689999998899999999999998863 11111257999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
|| ++|++++++ +++++ +++++++|++|+++|+++. +++.+.+|||.|+|++|+|..+.. + +......++.
T Consensus 330 gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~~gvel~~~~~---~-~~~~~~~i~~ 404 (453)
T PRK06943 330 GNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLA-AHPQVRHLRQRGTIFAFDVALDGD---A-ARTFSRRFFE 404 (453)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-cCCCEEeEeccccEEEEEEccCCC---c-chHHHHHHHH
Confidence 99 999999999 99876 8999999999999999995 588899999999999999974321 1 1245678899
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.++ +++++|.|||++ |++|||++++++
T Consensus 405 ~~~~~Gll~~~~---g~~l~~~Ppl~i---t~~eid~~~~~l 440 (453)
T PRK06943 405 AALERELLLRPI---GTTVYLMPPYVL---DDDEIAWLAERT 440 (453)
T ss_pred HHHHCCcEEEec---CCEEEEeCCCcC---CHHHHHHHHHHH
Confidence 999999999875 478999999999 589999999985
No 14
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-37 Score=310.74 Aligned_cols=181 Identities=24% Similarity=0.401 Sum_probs=157.6
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||+|||+|||||||||||.+|+++++||+|| ++|+|+|| +|+||+++++++ +.+.+ ..|++||+
T Consensus 255 c~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~gK~l~gG-~Pi~av~~~~~~-~~~~~--------~~~~~T~~ 324 (459)
T PRK06931 255 TQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMSKAVGGG-LPLAVLGIKKEF-DAWQP--------GGHTGTFR 324 (459)
T ss_pred HHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEecccccCC-cceeeeeeHHHH-hhccC--------CCCCCCCC
Confidence 3468999999999999999999999999999999 68999999 599999998874 65532 56999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC-----CCCChHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK-----VPLNSRHM 150 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~-----~p~~~~~~ 150 (329)
|| ++|++++++ +++++ +++++++|++|+++|++++++||.+.+|||.|+|++|+|.+++..+ .+.+.+..
T Consensus 325 gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~ 404 (459)
T PRK06931 325 GNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELA 404 (459)
T ss_pred CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHH
Confidence 99 999999999 98876 8999999999999999999999999999999999999997543221 11123456
Q ss_pred HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..++..|+++||++.+.+..+|+++|.|||++ |++|||++++++
T Consensus 405 ~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~i---t~~eid~~~~~l 448 (459)
T PRK06931 405 AAIQKACFENGLLLERGGRNGNVVRLLPPLLI---TQAECEEFIDRF 448 (459)
T ss_pred HHHHHHHHHCCcEEeecCCCCCEEEEECCCCc---CHHHHHHHHHHH
Confidence 78899999999999887656799999999999 589999999986
No 15
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=7.6e-37 Score=311.18 Aligned_cols=186 Identities=18% Similarity=0.218 Sum_probs=160.5
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||+|||+|||||||||||.+|+++++||+|| ++|+|+|||+|+||++++++||+.+... ......+.|++||+
T Consensus 290 c~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~-~~~~~~~~h~~T~~ 368 (504)
T PLN02760 290 LKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQ-SNKLGSFAHGFTYS 368 (504)
T ss_pred HHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEEecccccCCccccceEeecHHHHhhhhcc-cccccCcccCCCCC
Confidence 4578999999999999999999999999999999 6899999988999999999999988631 11111357999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC--hHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN--SRHMTHI 153 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~--~~~~~~~ 153 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++ .++|.+.+|||.|+|++|+|..++..+.++. .+....+
T Consensus 369 gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i 447 (504)
T PLN02760 369 GHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAF-SGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYF 447 (504)
T ss_pred CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-hcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHH
Confidence 99 999999999 88876 899999999999999998 6789999999999999999976544333432 2356778
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.|+++||++.+. +++++|.|||++ |++|||++++++
T Consensus 448 ~~~~~~~Gvl~~~~---g~~lrl~Ppl~i---t~eeid~~~~~l 485 (504)
T PLN02760 448 GAECKKRGMLVRVA---GDNIMMSPPLII---TPEEVDELISIY 485 (504)
T ss_pred HHHHHhCCcEEEec---CCEEEEECCCCC---CHHHHHHHHHHH
Confidence 99999999999874 478999999999 589999999986
No 16
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=8.2e-37 Score=306.72 Aligned_cols=188 Identities=21% Similarity=0.294 Sum_probs=163.8
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+.-+||++||+|||||||||||.+|+++++||+|| ++|+|+|||+|+||+++++++|+.+.. . ...+.|++||
T Consensus 229 lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~---~-~~~~~~~~T~ 304 (447)
T PRK06917 229 ICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILR---G-SRSIMSGHTL 304 (447)
T ss_pred HHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHHhc---c-CcccccccCC
Confidence 34568999999999999999999999999999999 689999998899999999999998863 1 1135799999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC--hHHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN--SRHMTH 152 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~--~~~~~~ 152 (329)
++| ++|++++++ +++++ +++++++|++|+++|+++.+++|.+.+|||.|+|++|+|..++..+.++. .+....
T Consensus 305 ~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~ 384 (447)
T PRK06917 305 SANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASE 384 (447)
T ss_pred CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHH
Confidence 999 999999999 88865 89999999999999999999999999999999999999986544444442 246778
Q ss_pred HHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+++.|+++||++.+++ ..+|+++|.|||++ |++|||++++++
T Consensus 385 ~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~i---t~~eid~~~~~l 431 (447)
T PRK06917 385 LISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTI---TYSELDELLSIF 431 (447)
T ss_pred HHHHHHhCCcEEEecccccCCCCCCEEEEECCCcC---CHHHHHHHHHHH
Confidence 9999999999998753 23689999999999 589999999986
No 17
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=8.3e-37 Score=307.65 Aligned_cols=187 Identities=20% Similarity=0.288 Sum_probs=160.3
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-.||+|||+|||||||||||.+|+++++||+|| ++|+|+||++|+||+++++++++.+.. .+.| +||+
T Consensus 258 c~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~~~-------~~~~-~T~~ 329 (459)
T PRK06082 258 CDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQI-------SLGH-YTHE 329 (459)
T ss_pred HHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEEecccccCCCCcceEEEEcHHHHhhccC-------CCCC-CCCC
Confidence 3478999999999999999999999999999999 689999998899999999999865431 2457 8999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++.++||.+.+|||.|+|++|+|..+...+.+ +.+....++.
T Consensus 330 gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~-~~~~~~~~~~ 408 (459)
T PRK06082 330 KSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKER-AYDEAEAVLY 408 (459)
T ss_pred cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCc-cHHHHHHHHH
Confidence 99 999999999 98876 899999999999999999999999999999999999999754432222 2245677889
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhccccchhhhh
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQSY 205 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~~~~~~~~~ 205 (329)
.|+++||++.+++ +++++|.|||++ |++|||++++++. .++.++
T Consensus 409 ~~~~~Gvl~~~~~--~~~i~~~Ppl~i---t~~eid~~~~~l~-~~l~~~ 452 (459)
T PRK06082 409 RCLNNGLSFKVSQ--GNVIQLSPPLII---TREELTQALAILE-EAIAKI 452 (459)
T ss_pred HHHhCCCEEEecC--CCEEEEeCCCcc---CHHHHHHHHHHHH-HHHHHH
Confidence 9999999998753 699999999999 5899999999863 344444
No 18
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=1.4e-36 Score=305.89 Aligned_cols=182 Identities=23% Similarity=0.298 Sum_probs=157.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
-+||+|||+|||||||||||++|+++++||+|| ++|+|+|||+|+||++++++||+.+.. .. ..+.|++||++
T Consensus 250 ~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~--~~--~~~~~~~T~~g 325 (456)
T PRK07480 250 RKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIE--EG--GEFNHGFTYSG 325 (456)
T ss_pred HHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhc--CC--CCcccCCCCCc
Confidence 368999999999999999999999999999999 689999998899999999999998831 01 12579999999
Q ss_pred c-HHHHHHHHh-hHHhH---HHHH-HHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHT-YVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTHI 153 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v-~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~~ 153 (329)
| ++|++++++ +++++ ++++ +++|++|+++|+++ .+||.+.+|||.|+|++|+|..+...+.++.. .....+
T Consensus 326 npl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l-~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~ 404 (456)
T PRK07480 326 HPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLREL-ADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTIC 404 (456)
T ss_pred CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-hcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHH
Confidence 9 999999999 98876 8999 69999999999996 57999999999999999999765443444422 234668
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...|+++||++.++ +++++|.|||+| |++|||++++++
T Consensus 405 ~~~~~~~Gll~~~~---~~~l~~~Ppl~i---t~~eid~~~~~l 442 (456)
T PRK07480 405 RDHCFANGLIMRAV---GDRMIISPPLVI---THAEIDELVEKA 442 (456)
T ss_pred HHHHHHCCcEEeec---CCEEEEECCCCC---CHHHHHHHHHHH
Confidence 88999999999874 489999999999 589999999986
No 19
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-36 Score=306.29 Aligned_cols=185 Identities=23% Similarity=0.230 Sum_probs=158.9
Q ss_pred ccccceEEehhHhhchhccchhhhhc-ccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQ-CLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e-~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
-+||+|||+|||||||||||++|+++ ++||+|| ++|+|+|||+|+||++++++||+.+... ......+.|++||+
T Consensus 251 ~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~-~~~~~~~~~~~T~~ 329 (466)
T PRK07036 251 RRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGP-NAKGNVFTHGFTYS 329 (466)
T ss_pred HHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHHHhcc-cCcCcccccCCCCC
Confidence 46899999999999999999999998 7999999 6899999988999999999999988631 01111357999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC--hHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN--SRHMTHI 153 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~--~~~~~~~ 153 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++ ++||.+.+|||.|+|++|+|..++..+.++. ......+
T Consensus 330 gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~ 408 (466)
T PRK07036 330 GHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASL-RELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRI 408 (466)
T ss_pred CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-ccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHH
Confidence 99 999999999 98866 899999999999999988 5799999999999999999986554443432 2356788
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...|+++||++.+. +++++|.|||++ |++|||++++++
T Consensus 409 ~~~~~~~Gvl~~~~---~~~~~l~Ppl~i---t~~~id~~~~~l 446 (466)
T PRK07036 409 DRHCQERGLLVRPL---EHLCVLSPPLII---TRAQIDEIVAIL 446 (466)
T ss_pred HHHHHHCCcEEeec---CCEEEEeCCCcC---CHHHHHHHHHHH
Confidence 99999999999875 478999999999 489999999985
No 20
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=1.2e-36 Score=305.40 Aligned_cols=176 Identities=13% Similarity=0.186 Sum_probs=158.4
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||||||||||++|+++++||+|| ++|+|+||++|+||+++++++++.+.. .++.|++||+
T Consensus 254 c~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lg~G~~Pigavv~~~~i~~~~~~------~~~~~~~T~~ 327 (442)
T TIGR03372 254 CDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFD------NPFLHTTTFG 327 (442)
T ss_pred HHHcCCEEEEeecccCCCccccchhhhhcCCCCCeeeehhhhcCCcccceEEEecHHHHHhhhc------cCccccCCCC
Confidence 3478999999999999999999999999999999 689999998899999999999998742 1367999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCC-ceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFA-IVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p-~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
|| ++|++++++ +++++ +++++++|++|+++|+++..+|| .+.+|||.|+|++|+|.++ .....++
T Consensus 328 gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~---------~~~~~i~ 398 (442)
T TIGR03372 328 GNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDN---------EIGYAFA 398 (442)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCCh---------HHHHHHH
Confidence 99 999999999 98875 89999999999999999999998 7899999999999999742 3456789
Q ss_pred HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.|+++||++.++++.++++||.|||++ |++|||++++++
T Consensus 399 ~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~---t~~~id~~~~~l 438 (442)
T TIGR03372 399 KELFQQNILVAGTLNNAKSIRIEPPLTI---TIEQCALVIKAA 438 (442)
T ss_pred HHHHHCCcEEeecCCCCCEEEEECCccc---CHHHHHHHHHHH
Confidence 9999999999876655799999999999 589999999985
No 21
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=2.2e-36 Score=304.55 Aligned_cols=186 Identities=24% Similarity=0.310 Sum_probs=160.4
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||+|||+|||||||||||++|+++++||+|| ++|+|+||++|+||+++++++++.+... ......+.|++||+
T Consensus 248 c~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~-~~~~~~~~h~~T~~ 326 (460)
T PRK06105 248 LRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADE-SGKIGTFGHGFTAS 326 (460)
T ss_pred HHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcc-cccCcccccCCCCC
Confidence 4578999999999999999999999999999999 6899999988999999999999987631 11111356999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTHI 153 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~~ 153 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++ ++||.+.+|||+|+|++|+|..+...+.+++. .....+
T Consensus 327 gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i 405 (460)
T PRK06105 327 GHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRAL-ADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARA 405 (460)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh-hcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHH
Confidence 99 999999999 88876 899999999999999999 78999999999999999999765444445432 345678
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...|+++||++.++ +++++|.|||++ |++|||++++++
T Consensus 406 ~~~~~~~Gvl~~~~---g~~i~l~Ppl~i---t~~eid~~~~~l 443 (460)
T PRK06105 406 NAAAHEHGVISRAM---GDTLAFCPPLII---TAAQVDEMVDRF 443 (460)
T ss_pred HHHHHHCCeEEEec---CCEEEEECCCcc---CHHHHHHHHHHH
Confidence 89999999999875 479999999999 479999999986
No 22
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.2e-36 Score=304.62 Aligned_cols=186 Identities=23% Similarity=0.283 Sum_probs=160.2
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||+|||+|||||||||||++|+++++||+|| ++|+|+|||+|+||+++++++++.+.+. ......+.|++||+
T Consensus 254 c~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~-~~~~~~~~~~~T~~ 332 (460)
T PRK06916 254 CTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGD-YEEQKTFFHGHSYT 332 (460)
T ss_pred HHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhcc-ccccCccccCCCCC
Confidence 4468999999999999999999999999999999 6899999988999999999999987631 11112357999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTHI 153 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~~ 153 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++.+ ++.+.+|||.|+|++|+|..++..+.++.. .....+
T Consensus 333 gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~-~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i 411 (460)
T PRK06916 333 GNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFA-LKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQV 411 (460)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-CCCeEEeecCCceeeEEeecccccccCCCchhhHHHHH
Confidence 99 999999999 88876 89999999999999999975 899999999999999999865544444422 245678
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+..|+++||++.+. +++++|.|||++ |++|||++++++
T Consensus 412 ~~~~~~~Gvl~~~~---g~~l~~~Ppl~i---t~~~id~~~~~l 449 (460)
T PRK06916 412 CKRSRELGMLTRPL---GNTIVFMPPLAS---TIDELDEMLRIL 449 (460)
T ss_pred HHHHHHCCeEEEec---CCEEEEeCCccc---CHHHHHHHHHHH
Confidence 99999999999875 489999999999 589999999986
No 23
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-36 Score=304.48 Aligned_cols=182 Identities=23% Similarity=0.297 Sum_probs=159.4
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||+|||+|||||||||||.+|+++++||+|| ++|+|+|||+|+||+++++++|+.+.. . .+.|++||+
T Consensus 244 c~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~---~---~~~~~~T~~ 317 (451)
T PRK06062 244 CDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFAD---R---PYPGGLTYS 317 (451)
T ss_pred HHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeechhhhcCCcCcEEEEEcHHHHHHhcc---C---CCCCCCCCC
Confidence 4578999999999999999999999999999999 689999998899999999999998752 1 257999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHH-HHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh-----HH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVG-NFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS-----RH 149 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG-~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~-----~~ 149 (329)
+| ++|++++++ +++++ +++++++| ++|+++|+++.+++|.+.+|||.|+|++|+|..++..+.|++. ..
T Consensus 318 gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~ 397 (451)
T PRK06062 318 GHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAA 397 (451)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHH
Confidence 99 999999999 98876 89999999 6999999999999999999999999999999754433333322 25
Q ss_pred HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+++.|+++||++.+. +++++|.|||++ |++|||++++++
T Consensus 398 ~~~~~~~l~~~Gvl~~~~---~~~lrl~ppl~~---t~~eid~~~~~l 439 (451)
T PRK06062 398 MAAVKAACKERGLLPFVN---GNRIHVVPPCTV---TEDEVREGLAIL 439 (451)
T ss_pred HHHHHHHHHHCCcEEeec---CCEEEEECCccC---CHHHHHHHHHHH
Confidence 678899999999998763 589999999998 589999999986
No 24
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=3.6e-36 Score=303.04 Aligned_cols=191 Identities=16% Similarity=0.146 Sum_probs=161.5
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||+|||+|||||||||||++|+++++||+|| ++|+|+|||+|+||+++++++++.+.. . ...+.|++||+
T Consensus 252 c~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~--~--~~~~~~~~T~~ 327 (460)
T PRK12403 252 CRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVE--Q--GGVFAHGLTYS 327 (460)
T ss_pred HHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEEEcccccccccceEEEEECHHHHHHHhc--C--CCccccCCCCC
Confidence 4468999999999999999999999999999999 689999998899999999999998753 1 12356999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHH-HHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTY-VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTH 152 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~-~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~ 152 (329)
+| ++|++++++ +++++ +++++ ++|++|+++|+++.++||.+.+|||.|+|++++|..++..+.++.. .....
T Consensus 328 gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~ 407 (460)
T PRK12403 328 GHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWR 407 (460)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHH
Confidence 99 999999999 99876 79996 9999999999999999999999999999999999765443333321 23455
Q ss_pred HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhccccchhhhh
Q psy7882 153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQSY 205 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~~~~~~~~~ 205 (329)
+...|+++||++.+. +++++|+|||+| |++|||++++++. .+..++
T Consensus 408 ~~~~~~~~Gll~~~~---~~~~~l~Ppl~i---t~~eid~~~~~l~-~al~~~ 453 (460)
T PRK12403 408 CRTIGFEEGVIIRST---LGRMIMAPALVA---GRAEIDELVDKTR-IAVDRT 453 (460)
T ss_pred HHHHHHhCCEEEEec---CCEEEEECCCCC---CHHHHHHHHHHHH-HHHHHH
Confidence 778899999999864 367999999999 5899999999863 344443
No 25
>KOG1402|consensus
Probab=100.00 E-value=2.1e-36 Score=287.04 Aligned_cols=175 Identities=19% Similarity=0.240 Sum_probs=156.7
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
-+|++|||+||||||+||||++||++|..|.|| ++|+|+||++|+|||+++++||..+.+ +.||+||+|
T Consensus 238 tkynvl~I~DEvQTGl~RTGk~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~p--------geHgsTygg 309 (427)
T KOG1402|consen 238 TKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIKP--------GEHGSTYGG 309 (427)
T ss_pred HhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccCC--------CccccccCC
Confidence 467899999999999999999999999999999 689999999999999999999988763 789999999
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCc-eeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAI-VGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~-v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
| ++|++++++ +++.+ +++++.+|+.|+..|.++..+.|. +.+|||+|++.+|+|.+.+.. ..-+..++-
T Consensus 310 NpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~-----~~~aw~~cl 384 (427)
T KOG1402|consen 310 NPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTS-----GQDAWDVCL 384 (427)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEecccccc-----chhHHHHHH
Confidence 9 999999999 88865 899999999999999999999985 799999999999999754321 123556788
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.++|++.-|. ++|+|||+|||+|+ ++|+++.+++.
T Consensus 385 ~lk~~g~LAkpt--H~~IiRfaPPL~I~---e~dl~eg~e~i 421 (427)
T KOG1402|consen 385 ALKENGLLAKPT--HGNIIRFAPPLVIS---EEDLREGIEAI 421 (427)
T ss_pred cccccccccCCC--CCCeEEecCCcccC---HHHHHHHHHHH
Confidence 889999999884 68999999999995 79999999985
No 26
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=9e-36 Score=300.20 Aligned_cols=176 Identities=15% Similarity=0.201 Sum_probs=158.1
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-.||+|||+|||||||||||++|+++++||+|| ++|+|+||++|+||+++++++++.+.. . ++.|++||+
T Consensus 261 c~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggG~~Pigav~~~~~i~~~~~~---~---~~~~~~T~~ 334 (459)
T PRK11522 261 CDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD---N---PFLHTTTFG 334 (459)
T ss_pred HHHcCCEEEeccceecCCccchhhhhhccCCCCCEEEechhhhCCCccceeEEEcHHHHHHhcc---C---CcccCCCCC
Confidence 3468999999999999999999999999999999 689999998899999999999987752 1 367999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCC-ceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFA-IVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p-~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
|| ++|++++++ +++++ +++++++|++|+++|+++.++|| .+.+|||.|+|++|+|..+ +....+.
T Consensus 335 gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~---------~~~~~i~ 405 (459)
T PRK11522 335 GNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN---------EIGYNFA 405 (459)
T ss_pred CCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc---------hHHHHHH
Confidence 99 999999999 88875 89999999999999999999998 7899999999999999742 3456789
Q ss_pred HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..|+++||++.+.+..++++||.||+++ |++|||++++++
T Consensus 406 ~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~---t~~~id~~l~~l 445 (459)
T PRK11522 406 SEMFRQRVLVAGTLNNAKTIRIEPPLTL---TIEQCEQVLKAA 445 (459)
T ss_pred HHHHHCCeEEEecCCCCCEEEEECCccC---CHHHHHHHHHHH
Confidence 9999999999876556799999999999 589999999986
No 27
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-35 Score=296.59 Aligned_cols=180 Identities=18% Similarity=0.228 Sum_probs=160.0
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||+|||+|||||||||||.+|+++++||+|| ++|+|+|| +|+||+++++++++.+.. ..|++||+
T Consensus 249 c~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~gK~l~~G-~Pi~av~~~~~i~~~~~~--------~~~~~T~~ 319 (443)
T PRK06058 249 CRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTAKGIAGG-LPLSAVTGRAEIMDAPHP--------GGLGGTYG 319 (443)
T ss_pred HHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEcccccCC-CccEEEEEcHHHHhhccC--------CCCCCCCC
Confidence 3468999999999999999999999999999999 68999999 599999999999988753 46899999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++.++|+.+.+|||.|+|++++|..++. ..+ +.+....+..
T Consensus 320 gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~-~~~-~~~~~~~l~~ 397 (443)
T PRK06058 320 GNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGT-TEP-DAELTKALAA 397 (443)
T ss_pred CCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCC-CCC-cHHHHHHHHH
Confidence 99 999999999 88866 89999999999999999999999999999999999999975432 122 3456788999
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+++..+++|||.|||++ |++|||++++++
T Consensus 398 ~~~~~Gv~~~~~~~~~~~lr~~Ppl~~---t~~~i~~~~~~l 436 (443)
T PRK06058 398 AAHAAGVIVLTCGTYGNVIRLLPPLVI---GDELLREGLDVL 436 (443)
T ss_pred HHHHCCeEEeccCCCCCEEEEECCCcc---CHHHHHHHHHHH
Confidence 999999999887656799999999999 589999999986
No 28
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=323.43 Aligned_cols=182 Identities=23% Similarity=0.371 Sum_probs=161.9
Q ss_pred cccccceEEehhHhhchhccch-hhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGT-YLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~-~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
.-+||+|||+|||||||||||. +|+++++||+|| ++|+||||+ |+|||+++++||+.+.. + ..|++||
T Consensus 814 c~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lggG~-Plgav~~~~ei~~~~~~---g----~~~~~Tf 885 (1013)
T PRK06148 814 VRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGH-PMGAVVTTREIADSFDN---G----MEYFNTF 885 (1013)
T ss_pred HHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeecccccCCc-ceEEEEEcHHHHhhccC---C----CccccCC
Confidence 3468999999999999999996 999999999999 689999995 99999999999998753 1 2488999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
+|| ++|++++++ +++++ +++++++|++|+++|++++++||.+.+|||.|+|++|+|..++..+.| +.+.+..++
T Consensus 886 ~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~-~~~~~~~i~ 964 (1013)
T PRK06148 886 GGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAP-ATAIARYVK 964 (1013)
T ss_pred CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCc-cHHHHHHHH
Confidence 999 999999999 98876 899999999999999999999999999999999999999865443333 234677899
Q ss_pred HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..|+++||++.++|+.+++++|.|||++ |++|||++++++
T Consensus 965 ~~~~~~Gvl~~~~g~~~~vlr~~Ppl~i---t~~~id~~l~~l 1004 (1013)
T PRK06148 965 NGARERGILIGTEGPHDNVLKIRPPLIF---SRADADHLLEVL 1004 (1013)
T ss_pred HHHHhCCeEEeccCCCCCEEEEeCCccC---CHHHHHHHHHHH
Confidence 9999999999988777899999999999 589999999986
No 29
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=1.5e-35 Score=296.86 Aligned_cols=180 Identities=21% Similarity=0.321 Sum_probs=157.1
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
-+||+|||+|||||||||||++|+++++||+|| ++|+|+|| +|+|+++++++ ++.+.. ..|++||++
T Consensus 237 ~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~~G-~Pigav~~~~~-~~~~~~--------~~~~~T~~g 306 (442)
T TIGR00709 237 RKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVMSKAVGGG-LPLAVLLIAPE-FDAWQP--------AGHTGTFRG 306 (442)
T ss_pred HHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEEEcccccCC-cccEEEEEchH-HhccCC--------CcCCCCCCc
Confidence 468999999999999999999999999999999 68999999 59999999998 555532 468999999
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCC---CC--ChHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKV---PL--NSRHMT 151 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~---p~--~~~~~~ 151 (329)
| ++|++++++ +++++ +++++++|++|+++|++++++||.+.+|||.|+|++|+|.+++.++. ++ +.+...
T Consensus 307 npla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~ 386 (442)
T TIGR00709 307 NQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAA 386 (442)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHH
Confidence 9 999999999 88866 89999999999999999999999999999999999999975433221 11 224567
Q ss_pred HHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.++..|+++||++.+.+..+++|++.|||++ |++|||++++++
T Consensus 387 ~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~i---t~~ei~~~~~~l 429 (442)
T TIGR00709 387 AIQGACFENGLLLETGGREGEVFRLLCPITI---DQEECEEGISRF 429 (442)
T ss_pred HHHHHHHHCCeEEeecCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence 8899999999999887666899999999999 589999999986
No 30
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=1.9e-35 Score=314.24 Aligned_cols=185 Identities=14% Similarity=0.050 Sum_probs=155.7
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||+|||+|||||||||||++|+++++||+|| ++|+|+|||+|+||++++++||+.|.. ......+.|++||+
T Consensus 615 c~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~--~~~~~~~~hg~Ty~ 692 (817)
T PLN02974 615 CRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRG--PSKLDALLHGHSYT 692 (817)
T ss_pred HHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhcc--ccccCCcccCCCCC
Confidence 3468999999999999999999999999999999 689999999999999999999999863 11112467999999
Q ss_pred cc-HHHHHHHHh-hHHhH-------HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER-------FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 81 gn-lA~aaala~-~ile~-------le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
|| ++|++++++ +++++ .++.++++++|.+.|.+...+||.|.+|||+|+|++|+|.++... .+|....+.
T Consensus 693 gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~-~~~~~~~a~ 771 (817)
T PLN02974 693 AHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSG-SGYSSLYAR 771 (817)
T ss_pred cCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcc-cccchHHHH
Confidence 99 999999999 88865 345666777777788544467999999999999999999865433 355445677
Q ss_pred HHHHHHH-HCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDSCK-EHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~-e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.+.|+ ++||++++. +|+|+++||+++ +++|++++++++
T Consensus 772 ~v~~~~~~~~Gl~~r~~---Gnvi~l~pP~~i---~~e~l~~~~~~l 812 (817)
T PLN02974 772 SVVRRLRREDGIYARPL---GNVVYLMCGPTT---SPETCTRLLRKV 812 (817)
T ss_pred HHHHHHHHhCCEEEEec---CCEEEEeCCCCC---CHHHHHHHHHHH
Confidence 8889999 999999985 589999999999 489999999975
No 31
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-34 Score=290.76 Aligned_cols=178 Identities=23% Similarity=0.338 Sum_probs=156.6
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-.||+|||+|||||||||||.+|+++++||+|| ++|+|+||+ |+|++++++++++. .. ..|.+||+
T Consensus 252 c~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~-pi~av~~~~~i~~~-~~--------~~~~~T~~ 321 (457)
T PRK05639 252 LDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLIIFGKGVASGM-GLSGVIGRKELMDL-TS--------GSALLTPA 321 (457)
T ss_pred HHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEEechhhcCCC-cceeEEehHHHHhh-cC--------CCcccCCC
Confidence 3468999999999999999999999999999999 689999995 99999999999983 21 34778999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++..+||.+.+|||.|+|++++|..+.. .+ +.+....+.+
T Consensus 322 g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~--~~-~~~~~~~~~~ 398 (457)
T PRK05639 322 ANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENG--KP-DPELTGKICW 398 (457)
T ss_pred cCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCC--CC-CHHHHHHHHH
Confidence 99 999999999 88876 89999999999999999999999999999999999999975322 12 2346678999
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+.+..++++||.|||++ |++|||++++++
T Consensus 399 ~~~~~Gv~~~~~g~~~~~lr~~Ppl~i---t~~~id~~~~~l 437 (457)
T PRK05639 399 RAFELGLILPSYGMFGNVIRITPPLVI---TKEIAEKGLEIM 437 (457)
T ss_pred HHHhCCeEEeecCCCCCEEEEeCCCcc---CHHHHHHHHHHH
Confidence 999999999887655799999999999 589999999986
No 32
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.4e-34 Score=288.70 Aligned_cols=176 Identities=16% Similarity=0.111 Sum_probs=153.2
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||++||+|||||||||||++|+++++||.|| ++|+|+|||+|+||+++++++++.+.. ......+.|++||+
T Consensus 231 c~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~--~~~~~~~~h~~T~~ 308 (422)
T PRK05630 231 CDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLIST--PNGGGALMHGPTFM 308 (422)
T ss_pred HHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeeeeechhhcCccccceeeccHHHHHHHhc--cCCCCccccCCCCc
Confidence 4568999999999999999999999999999999 689999998899999999999998853 11111357999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ .++++++|++|+++|+++. ++|.+.+|||+|+|++|+|..+. ....+..
T Consensus 309 g~Pla~aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l~-~~~~v~~vRg~Gl~~~ie~~~~~---------~~~~~~~ 378 (422)
T PRK05630 309 ANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGLSPLA-HLPGVADVRVLGAIGVVEMEQPV---------DMEEATQ 378 (422)
T ss_pred CCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhh-cCCCeeeeeccccEEEEEECCcc---------cHHHHHH
Confidence 99 999999999 88876 7899999999999999875 48899999999999999996421 1346888
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+. +++++|.|||++ |++|||++++++
T Consensus 379 ~~~~~Gl~~~~~---g~~l~~~PpL~i---t~~~i~~~~~~l 414 (422)
T PRK05630 379 AAVDHGVWLRPF---GRLVYVMPPYIT---TSEQIAQICAAL 414 (422)
T ss_pred HHHHCCeEEEec---CCEEEEECCccC---CHHHHHHHHHHH
Confidence 999999999875 489999999999 489999999985
No 33
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=1.2e-34 Score=289.71 Aligned_cols=176 Identities=16% Similarity=0.109 Sum_probs=154.4
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+..+||+|||+|||||||||||++|+++++||+|| ++|+|+|||+|+||+++++++++.+.. .....+.|++||
T Consensus 234 lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~---~~~~~~~~~~T~ 310 (428)
T PRK07986 234 LCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETISN---GEAGCFMHGPTF 310 (428)
T ss_pred HHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEEEechhhhCCcccCcchhchHHHHHHhhc---CCCCccccCCCC
Confidence 34578999999999999999999999999999999 689999998899999999999998863 111135699999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
++| ++|++++++ +++++ +++++++|++|+++|+++. +|+.+.+|||.|+|+++++..+. ....+.
T Consensus 311 ~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~-~~~~i~~vRg~Gl~~~ve~~~~~---------~~~~~~ 380 (428)
T PRK07986 311 MGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPLR-DAPMVADVRVLGAIGVVETTRPV---------NMAALQ 380 (428)
T ss_pred CcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-cCCCEEeEeccceEEEEEeCCcc---------cHHHHH
Confidence 999 999999999 88876 8999999999999999986 48999999999999999996421 134688
Q ss_pred HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.|+++||++.++ +++++|.|||++ |++||+++++++
T Consensus 381 ~~l~~~Gl~~~~~---g~~i~~~Ppl~i---t~~ei~~~~~~l 417 (428)
T PRK07986 381 RFFVEQGVWIRPF---GKLIYLMPPYII---LPEQLQRLTAAV 417 (428)
T ss_pred HHHHHCCcEEEec---CCEEEEeCCCCC---CHHHHHHHHHHH
Confidence 9999999999875 489999999999 589999999985
No 34
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=312.07 Aligned_cols=181 Identities=23% Similarity=0.268 Sum_probs=160.1
Q ss_pred ccccceEEehhHhhchhccch-hhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT-YLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~-~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
-+||+|||+|||||||||||. +|+++++||+|| ++|+|||| +|+|||+++++|++.|.. . ..|.+||+
T Consensus 775 ~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~G-~Pl~av~~~~~i~~~~~~---~----~~~~sT~~ 846 (972)
T PRK06149 775 RARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNG-HPLGAVITRREIAEALEA---E----GYFFSSTG 846 (972)
T ss_pred HHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccCC-eeeEEEEEcHHHHhhhcc---C----CcccCCCC
Confidence 468999999999999999997 789999999999 68999999 599999999999998752 1 24568899
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++.++||.+.+|||.|+|+||||..+..++.+ +.+....++.
T Consensus 847 gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~-~~~~~~~i~~ 925 (972)
T PRK06149 847 GSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEP-ATEETAAICD 925 (972)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCC-ChHHHHHHHH
Confidence 99 999999999 99876 899999999999999999999999999999999999999755433333 2355778999
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.++|..+|+|+|.|||++ |++|||++++++
T Consensus 926 ~l~~~Gvl~~~~g~~~~vl~~~Ppl~i---t~~~id~~~~~l 964 (972)
T PRK06149 926 RLLELGVIMQPTGDHLNILKIKPPLCL---DRESADFFVDML 964 (972)
T ss_pred HHHhCCeEEeecCCCCCEEEEECCCcC---CHHHHHHHHHHH
Confidence 999999999998877799999999999 589999999986
No 35
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=9.1e-34 Score=285.68 Aligned_cols=186 Identities=21% Similarity=0.204 Sum_probs=159.5
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||++||+|||||||||||.+|+++++||+|| ++|+|+||++|+|++++++++++.+.. . . ..+.|++||+
T Consensus 251 c~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~--~-~-~~~~~~~T~~ 326 (460)
T PRK06541 251 CDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLD--G-P-TMFLHGYTFG 326 (460)
T ss_pred HHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHHhhc--C-C-CccccCCCCC
Confidence 3468999999999999999999999999999999 689999998899999999999998763 1 1 2467999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH-----HH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR-----HM 150 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~-----~~ 150 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++.+ +|.+.+|||.|+|++|+|..++..+.|+... ..
T Consensus 327 gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~-~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~ 405 (460)
T PRK06541 327 GHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLD-LPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLR 405 (460)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHH
Confidence 99 999999999 88765 89999999999999999976 8999999999999999997654444454322 22
Q ss_pred HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+...|+++||++.+.+...++|||.|||++ |++|||++++++
T Consensus 406 ~~~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~---t~~~id~~~~~l 449 (460)
T PRK06541 406 GFLSPALFEAGLYCRADDRGDPVVQLAPPLIS---GQEEFDEIEQIL 449 (460)
T ss_pred HHHHHHHHhCCeEEEecCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence 46788999999999875334589999999999 589999999986
No 36
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.1e-33 Score=282.81 Aligned_cols=176 Identities=14% Similarity=0.128 Sum_probs=153.9
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+..+||++||+|||||||||||++|+++++||+|| ++|+|+|||+|+|+++++++|++.+.+ .....+.|++||
T Consensus 236 lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~---~~~~~~~~~~T~ 312 (429)
T PRK06173 236 LCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICS---GEAKCFMHGPTF 312 (429)
T ss_pred HHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCCEEEeehhhhCCccccceEEecHHHHHHHhc---CCCCccccCCCC
Confidence 34578999999999999999999999999999999 689999998899999999999998752 111235799999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
++| ++|++++++ +++++ +++++++|++|+++|+++ .+++.+.+|||.|+|++|+|..+ .....+.
T Consensus 313 ~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~-~~~~~v~~vRg~Gl~~~iel~~~---------~~~~~i~ 382 (429)
T PRK06173 313 MANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELAPA-AEFDSVAEVRVLGAIGVVEMKEP---------VNMATLQ 382 (429)
T ss_pred CcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-hcCCCeeeeeccceEEEEEeCCc---------ccHHHHH
Confidence 999 999999999 88875 899999999999999987 56888999999999999999642 1135688
Q ss_pred HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.|+++||++.+. +++|+|.|||++ |++|||++++++
T Consensus 383 ~~l~e~Gi~v~~~---g~~l~~~Ppl~i---t~~ei~~~~~~l 419 (429)
T PRK06173 383 PRFVEHGIWVRPF---GKLVYIMPPFII---SPDELSQLTSGL 419 (429)
T ss_pred HHHHHCCeEEEec---CCEEEEeCCccC---CHHHHHHHHHHH
Confidence 9999999999875 479999999999 489999999986
No 37
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.2e-33 Score=281.51 Aligned_cols=182 Identities=17% Similarity=0.175 Sum_probs=155.0
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||+|||+|||||||||||.+|+++++||+|| ++|+|+||++|+||++++++|++.+... ......+.|++||+
T Consensus 245 c~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~-~~~~~~~~~~~T~~ 323 (442)
T PRK13360 245 CDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQG-PEAGIEFFHGYTYS 323 (442)
T ss_pred HHHcCCEEEEechhhCCCCCccchhhhhcCCCCceeeeeeccccCccceEEEEEcHHHHHHhhcC-CccccccccCCCCC
Confidence 4578999999999999999999999999999999 6899999988999999999999987631 11111246999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++. +++.+.+|||.|+|++++|...... +......+..
T Consensus 324 g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl~~~~~l~~~~~~----~~~~~~~~~~ 398 (442)
T PRK13360 324 GHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLR-DAPHVIDIRNLGLVGAVELAPRDGK----PGKRAYEVFL 398 (442)
T ss_pred CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh-cCCCeeeeeccceEEEEEEecCCCC----cchhHHHHHH
Confidence 99 999999999 98876 8999999999999999985 4888999999999999999743211 1234567888
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.++ ++++||.|||++ |++|||++++++
T Consensus 399 ~l~~~Gvl~~~~---~~~lr~~Ppl~~---t~~eid~~~~~l 434 (442)
T PRK13360 399 KCFEKGLMIRYT---GDILALSPPLII---EEAQIDELFDIL 434 (442)
T ss_pred HHHHCCcEEEec---CCEEEEeCCCcc---CHHHHHHHHHHH
Confidence 999999999874 479999999999 589999999986
No 38
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=3.6e-33 Score=280.26 Aligned_cols=182 Identities=16% Similarity=0.200 Sum_probs=154.4
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||||||||||.+|+++++||+|| ++|+|+||++|+|+++++++|++.+.. .......+.|++||+
T Consensus 248 c~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~-~~~~~~~~~~~~T~~ 326 (445)
T PRK09221 248 CDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQ-GPEYAIEFFHGYTYS 326 (445)
T ss_pred HHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEEeccccccCcccceeeEEcHHHHHhhcc-CcccccccccccCCC
Confidence 4568999999999999999999999999999999 689999998899999999999998753 001011246999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++. ++|.+.+|||.|+|++++|...... + ......+.+
T Consensus 327 ~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~-~~~~v~~vrg~Gl~~~v~~~~~~~~--~--~~~~~~~~~ 401 (445)
T PRK09221 327 AHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLK-GLPHVIDIRNIGLVAGIELAPRPGA--P--GARGYEAFM 401 (445)
T ss_pred cCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc-cCCCEEEEecCceEEEEEEeccccc--c--cchHHHHHH
Confidence 99 999999999 88865 8999999999999999984 5888999999999999999742211 1 123456889
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+. ++++||.|||++ |++|||++++++
T Consensus 402 ~~~~~Gv~~~~~---~~~lr~~Ppl~~---t~~eid~~~~~l 437 (445)
T PRK09221 402 KCFEKGLLVRYT---GDTIALSPPLII---EKAQIDELVDAL 437 (445)
T ss_pred HHHHCCeEEeec---CCEEEEECCccC---CHHHHHHHHHHH
Confidence 999999999764 589999999999 589999999986
No 39
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=7.6e-33 Score=276.34 Aligned_cols=180 Identities=20% Similarity=0.252 Sum_probs=159.0
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||++||+|||+|||||||.+|+++++|++|| ++|+|+||+ |+|++++++++++.+.. ..|++||+
T Consensus 228 ~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~~G~-pigav~~~~~i~~~~~~--------~~~~~T~~ 298 (425)
T PRK07495 228 CDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMAKGLAGGF-PLAAVTGRAEIMDAPGP--------GGLGGTYG 298 (425)
T ss_pred HHHcCCEEEEechhhcCCcCCCceeecccCCCCCEEeehhhhcCCc-cceEEEEcHHHHhccCC--------CCcCCCCC
Confidence 3468999999999999999999999999999999 689999995 99999999999987753 46889999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ .++++++|++|+++|+++.+++|.+.+|||.|+|++++|.++. ...| +.+....++.
T Consensus 299 ~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~-~~~~-~~~~~~~~~~ 376 (425)
T PRK07495 299 GNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDAD-SGLP-SAEFANRVRL 376 (425)
T ss_pred CCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCC-CCCc-cHHHHHHHHH
Confidence 99 999999999 88876 7899999999999999999999999999999999999997532 2222 2345678899
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.++|..+|+++|.|||++ |++|+|++++++
T Consensus 377 ~~~~~Gvl~~~~g~~~~~~r~~Ppl~i---t~~~id~~~~~l 415 (425)
T PRK07495 377 KALEKGLILLTCGVHGNVIRFLAPITI---QDDVFAEALDIL 415 (425)
T ss_pred HHHHCCeEEeecCCCCCEEEEeCCCcc---CHHHHHHHHHHH
Confidence 999999999887766799999999999 589999999985
No 40
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.9e-33 Score=278.14 Aligned_cols=179 Identities=22% Similarity=0.331 Sum_probs=157.2
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-.||++||+|||+|||||||.+|+++++||+|| ++|+++|| +|+|++++++++++.+.. ..|.+||+
T Consensus 237 c~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~gK~l~~G-~p~gav~~~~~i~~~~~~--------~~~~~T~~ 307 (445)
T PRK08593 237 CREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFGKSLAGG-MPMSAIVGRKEIMESLEA--------PAHLFTTG 307 (445)
T ss_pred HHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeecccccCC-cccEEEEEcHHHHhhhcc--------CCCCCCCC
Confidence 4468999999999999999999999999999999 68999999 599999999999988752 35788999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++.++||.+.+|||.|+|++++|..+.....+ +......+++
T Consensus 308 ~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~-~~~~~~~~~~ 386 (445)
T PRK08593 308 ANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTR-DNEAALKICN 386 (445)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCC-cHHHHHHHHH
Confidence 99 999999999 88866 899999999999999999999999999999999999999754332222 2346678999
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+. .++++||.||+++ |++|||++++++
T Consensus 387 ~~~~~Gv~~~~~--~~~~lr~~p~l~~---t~~~id~~~~~l 423 (445)
T PRK08593 387 YCFEHGVVIIAV--AGNVLRFQPPLVI---TYEQLDTALNTI 423 (445)
T ss_pred HHHHCCeEEecc--CCCEEEEECCCcc---CHHHHHHHHHHH
Confidence 999999999764 3689999999999 589999999986
No 41
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.97 E-value=1.1e-31 Score=265.41 Aligned_cols=168 Identities=20% Similarity=0.189 Sum_probs=144.5
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
...||++||+|||||||||||++|+++++||+|| ++|+|+|| +|+|+++++++++. +.. ..|++||+
T Consensus 209 ~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~gK~lg~G-~p~~av~~~~~i~~-~~~--------~~~~~T~~ 278 (395)
T PRK03715 209 TKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLGKGIGGG-VPLAALLAKAEVAV-FEA--------GDQGGTYN 278 (395)
T ss_pred HHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeehhhhhCC-cceEEEEEcccccc-ccC--------CCcCCCCC
Confidence 4468999999999999999999999999999999 68999999 59999999999962 321 46899999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++..+++ +.+|||.|+|++|+|..+ ....+..
T Consensus 279 g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-i~~vrG~Glm~~i~l~~~----------~~~~~~~ 347 (395)
T PRK03715 279 GNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEERG-LEGERGEGLLRALLLGKD----------IGPQIVE 347 (395)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcCC-cCeEEcceeEEEEEecCc----------hHHHHHH
Confidence 99 999999999 88876 89999999999999999988887 678999999999999642 1233555
Q ss_pred HHHHC---CceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEH---GLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~---GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+++. ||++.+. .++++||.||+++ |++|||++++++
T Consensus 348 ~~~~~~~~Gi~~~~~--~~~~lR~~p~l~~---t~~ei~~~~~~l 387 (395)
T PRK03715 348 KARDMQPDGLLLNAP--RPNLLRFMPALNV---TTEEIDQMIAML 387 (395)
T ss_pred HHHhccCCCEEEeec--CCCEEEEeCCccc---CHHHHHHHHHHH
Confidence 55555 9998765 3689999999999 589999999986
No 42
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.97 E-value=2.8e-31 Score=264.50 Aligned_cols=179 Identities=16% Similarity=0.167 Sum_probs=157.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
-+||++||+|||+|||||||.+|+++++|+.|| ++|+|+||+ |+|++++++++++.+.. ..|++||++
T Consensus 229 ~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi~t~gK~l~~G~-pigav~~~~~i~~~~~~--------~~~~~T~~g 299 (421)
T PRK09792 229 DEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGM-PLSGVVGNANIMDAPAP--------GGLGGTYAG 299 (421)
T ss_pred HHcCCEEEEeccccCCCCCCchhHHHhcCCCCcEEEeehhhcCCC-ceEEEEEcHHHHhccCC--------CCcCCCCCC
Confidence 468999999999999999999999999999999 689999995 99999999999987753 468999999
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
| ++|++++++ +++++ +++++++|++++++|+++.+++|.+.+|||.|+|++|+|.++. ...+ +......+++.
T Consensus 300 npl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~-~~~~-~~~~~~~l~~~ 377 (421)
T PRK09792 300 NPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQ-TGEP-SAAIAQKIQQR 377 (421)
T ss_pred CHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCc-cCCc-chHHHHHHHHH
Confidence 9 999999999 88865 8899999999999999999999999999999999999997432 1122 12456789999
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|+++||++.+++..+++|||.|||++ +++||+++++++
T Consensus 378 ~~~~Gv~i~~~g~~~~~irl~P~l~i---~~~ei~~~~~~l 415 (421)
T PRK09792 378 ALAQGLLLLTCGAYGNVIRFLYPLTI---PDAQFDAAMKIL 415 (421)
T ss_pred HHHCCcEEeecCCCCCEEEEeCCCcC---CHHHHHHHHHHH
Confidence 99999999876666799999999999 589999999875
No 43
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.97 E-value=5e-31 Score=264.42 Aligned_cols=176 Identities=23% Similarity=0.335 Sum_probs=154.6
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||+|||||||.+|+++++|+.|| ++|+++|| +|+|++++++++++.+. ..|++||+
T Consensus 251 ~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~~K~l~~G-~p~gav~~~~~i~~~~~---------~~~~~T~~ 320 (441)
T PRK05769 251 ADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLAKAIAGG-LPLGAVIGRAELMFLPP---------GSHANTFG 320 (441)
T ss_pred HHHcCCEEEEechhhCCCcccceehhhccCCCCCEEEEcccccCC-cccEEEEEehhhhhcCC---------CCCCCCCC
Confidence 4468999999999999999999999999999999 68999999 59999999999985321 46999999
Q ss_pred cc-HHHHHHHHh-hHHhH--HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER--FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 81 gn-lA~aaala~-~ile~--le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++.++||.+.+|||.|+|++|+|..++ ..+ +......+.+.
T Consensus 321 g~p~~~aaa~a~L~~l~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~--~~~-~~~~~~~~~~~ 397 (441)
T PRK05769 321 GNPVAAAAALATLEELEEGLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDR--KEP-DPKLRDKVLYE 397 (441)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCC--ccc-cHHHHHHHHHH
Confidence 99 999999999 88875 7899999999999999999999999999999999999997543 112 23466778999
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|+++||++.+.+ .++++|.||+++ |++|||++++++
T Consensus 398 ~~~~Gil~~~~~--~~~lr~~p~l~~---t~~~id~~~~~l 433 (441)
T PRK05769 398 AFKRGLLLLGAG--KSAIRIIPPLII---TEEEADIGLEIL 433 (441)
T ss_pred HHhCCcEEecCC--CCEEEEeCCCCC---CHHHHHHHHHHH
Confidence 999999998754 589999999999 589999999986
No 44
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.97 E-value=1.1e-30 Score=260.24 Aligned_cols=180 Identities=17% Similarity=0.218 Sum_probs=157.6
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-.||++||+|||+|||||||.+|+++++++.|| ++|+++|| +|+|++++++++++.+.. ..|++||+
T Consensus 228 c~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv~~sK~l~~G-~pigav~~~~~i~~~~~~--------~~~~~T~~ 298 (421)
T PRK06777 228 CDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLITMAKSLGGG-MPISAVVGRAEVMDAPAP--------GGLGGTYA 298 (421)
T ss_pred HHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEEeeehhhcCC-CceEEEEEcHHHHhccCC--------CCCCCCCC
Confidence 3468999999999999999999999999999999 68999999 599999999999987753 46889999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++..++|.+.+|||.|+|++++|..+. ...+ +.++...+..
T Consensus 299 ~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~-~~~~-~~~~~~~l~~ 376 (421)
T PRK06777 299 GNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQ-TGKP-SPEFTRQYQR 376 (421)
T ss_pred cCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCc-cCCc-cHHHHHHHHH
Confidence 99 999999999 88765 8899999999999999999889999999999999999996432 1112 2356778889
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+++..++++||.|||++ +++++|+++++.
T Consensus 377 ~~~~~Gv~i~~~~~~g~~lr~~ppl~i---~~~~i~~~~~~l 415 (421)
T PRK06777 377 QALEEGLLLLSCGVHGNVIRFLYPLTI---PDAQFSKALNIL 415 (421)
T ss_pred HHHhCCeEEeecCCCCCEEEEeCCCCC---CHHHHHHHHHHH
Confidence 999999999987656789999999999 589999999875
No 45
>KOG1403|consensus
Probab=99.97 E-value=6.5e-31 Score=247.55 Aligned_cols=179 Identities=25% Similarity=0.325 Sum_probs=157.0
Q ss_pred ccceEEehhHhhchhccch-hhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhcc
Q psy7882 7 RDCGVVVSAVDFGSGDNGT-YLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISDT 82 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~-~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~agn 82 (329)
+|-++|+||||+||||.|+ +|++|.|++.|| ++|.+|||+ |+++|+++++|.++|.. .+ ...-.||+||
T Consensus 242 aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmGNGh-PVa~VattkeIA~Af~a--tg----v~YFNTyGGn 314 (452)
T KOG1403|consen 242 AGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMGNGH-PVAAVATTKEIAQAFHA--TG----VEYFNTYGGN 314 (452)
T ss_pred CCCeEEeehhhhcccccchhhhhhhhhccccchheecccCCCCC-eeeEEeccHHHHHHhcc--cc----ceehhccCCC
Confidence 4779999999999999994 999999999999 679999997 99999999999999863 11 2345899999
Q ss_pred -HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHH
Q psy7882 83 -VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSC 157 (329)
Q Consensus 83 -lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l 157 (329)
++||+++++ +++++ .+|+.++|++|...|+++..+|++|++|||.||++||++.+|..++.| +...+..++.+|
T Consensus 315 PVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP-~tk~A~~~v~rl 393 (452)
T KOG1403|consen 315 PVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTP-DTKEAHWVVNRL 393 (452)
T ss_pred chhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCC-cHHHHHHHHHHH
Confidence 999999999 88876 889999999999999999999999999999999999999998877777 344566677788
Q ss_pred HH-CCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882 158 KE-HGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDC 196 (329)
Q Consensus 158 ~e-~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~ 196 (329)
.+ +||++...|++.|+++|-||++.+ ++.+++++..
T Consensus 394 ke~y~VLlsaDGPh~NilKiKPPmCFn---eena~e~v~~ 430 (452)
T KOG1403|consen 394 KELYRVLLSADGPHRNILKIKPPMCFN---EENADEFVLG 430 (452)
T ss_pred HHhhhEEEecCCCCCceeecCCCcccC---hhhHHHHHHH
Confidence 76 689999999999999999999996 5666666654
No 46
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.97 E-value=6.9e-31 Score=261.07 Aligned_cols=172 Identities=17% Similarity=0.245 Sum_probs=152.0
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcC-CccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKG-SFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgG-G~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
.-.||++||+|||||||||||++|++++++|.|| ++|+|+| | +|+|++++++++ +.+. ...|++||
T Consensus 224 c~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~~K~lg~~G-~pigav~~~~~~-~~~~--------~~~~~~T~ 293 (412)
T TIGR02407 224 CRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCLSKSISGYG-LPLALTLIKPEL-DVWK--------PGEHNGTF 293 (412)
T ss_pred HHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEEechhccCCc-cceeEEEEchhh-hccC--------CCccCCCC
Confidence 4578999999999999999999999999999999 6899999 7 599999999986 5543 25689999
Q ss_pred hcc-HHHHHHHHh-hH-HhH---HHHHHHHHHHHHHHHHHHHHhCC-ceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 80 SDT-VRPHVQIKK-SV-LER---FVHTYVVGNFLLTHLSKLREEFA-IVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 80 agn-lA~aaala~-~i-le~---le~v~~lG~~L~~gL~eL~~~~p-~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
++| ++|++++++ ++ +++ .++++++|++|+++|+++.++++ .+.+|||.|+|++++|.+ ......
T Consensus 294 ~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~---------~~~~~~ 364 (412)
T TIGR02407 294 RGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGD---------GDLAGK 364 (412)
T ss_pred CccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecC---------hHHHHH
Confidence 999 999999998 74 655 78999999999999999999998 689999999999999953 134567
Q ss_pred HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
++..|+++||++.+++..+++|||.||+++ |++|+|++++++
T Consensus 365 ~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~---t~~~i~~~~~~l 406 (412)
T TIGR02407 365 IAKAAFENGLIIETSGPNDEVIKLLPPLTI---DEETLQQGLDIL 406 (412)
T ss_pred HHHHHHHCCCEEeccCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence 899999999999887766799999999999 589999999985
No 47
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.97 E-value=1.4e-30 Score=259.90 Aligned_cols=180 Identities=25% Similarity=0.374 Sum_probs=157.5
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+..+||++||+|||+|||||||.+|+++++||+|| ++|+|+|| +|+|++++++++++.+.. ..|++||
T Consensus 236 lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK~lg~G-~pigav~~~~~i~~~~~~--------~~~~~T~ 306 (433)
T PRK08117 236 ICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIASG-LPLSAVVASKELMEQWPL--------GSHGTTF 306 (433)
T ss_pred HHHHcCCEEEEecchhccCccccchhHhhcCCCCCEeehhhhccCC-CcceeEEEcHHHHhhccC--------CCCCCCC
Confidence 34578999999999999999999999999999999 68999999 599999999999987742 4689999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
++| ++|++++++ +++++ +++++++|++|+++|+++..+|+.+.+|||.|+|++++|..+. ..+ +......+.
T Consensus 307 ~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~--~~~-~~~~~~~~~ 383 (433)
T PRK08117 307 GGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPD--GEP-DGDAVEKIL 383 (433)
T ss_pred CcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCC--CCc-chHHHHHHH
Confidence 999 999999999 88854 8999999999999999998889999999999999999997543 112 224566788
Q ss_pred HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.|+++||++.+.+..++++||.||+++ |++||+++++++
T Consensus 384 ~~l~~~Gv~~~~~g~~~~~lRl~p~~~~---t~~~i~~~~~~l 423 (433)
T PRK08117 384 DKCLEKGLLFYLCGNAGNVLRMIPPLTV---TKEEIDEGLDIL 423 (433)
T ss_pred HHHHHCCCEEeecCCCCCEEEEeCCccC---CHHHHHHHHHHH
Confidence 9999999999876655789999999998 589999999986
No 48
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.97 E-value=5.7e-31 Score=258.34 Aligned_cols=155 Identities=15% Similarity=0.181 Sum_probs=133.4
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
...||++||+||||||| |||++|+++++||.|| ++|+|+|| +|+||++.+.++. ...|++||+
T Consensus 192 c~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv~~gK~lggG-~P~~a~~~~~~~~------------~~~~~~T~~ 257 (364)
T PRK04013 192 TEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIVTMGKGIGNG-VPVSLTLTNFDVE------------RGKHGSTFG 257 (364)
T ss_pred HHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEEEecccccCC-ceeEEEEeccccc------------CCCcCCCCC
Confidence 45689999999999999 9999999999999999 68999999 5999999988762 146999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ ++|++++ |+++. ++.+.+|||+|+|+||||..+ ...+.+
T Consensus 258 gnp~~~aaa~a~l~~i~~~~l~~~~~~~-------l~~l~--~~~v~~vRG~Gl~~gve~~~~-----------~~~i~~ 317 (364)
T PRK04013 258 GNPLACKAVAVTLRILRRERLVEKAGEK-------FIEIK--GERVVTTRGRGLMIGIVLKKP-----------VGKYVE 317 (364)
T ss_pred cCHHHHHHHHHHHHHHHhccHHHHHHHH-------HHHhc--cCcceeeeeCcEEEEEEeCCc-----------HHHHHH
Confidence 99 999999999 98876 6777764 34442 378999999999999999631 245889
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.++| .|+++|.|||++ |++|+|++++++
T Consensus 318 ~~~~~Gll~~~~g--~~vlr~~Ppl~i---t~~~i~~~~~~l 354 (364)
T PRK04013 318 ELQNRGYLVHTAG--QRVIRLLPPLII---SKDTMEEAKSAI 354 (364)
T ss_pred HHHhCCcEEeeCC--CCEEEEeCCccc---CHHHHHHHHHHH
Confidence 9999999998864 599999999999 489999999986
No 49
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.97 E-value=2.3e-30 Score=257.35 Aligned_cols=173 Identities=24% Similarity=0.259 Sum_probs=154.0
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||++||+|||+|||||||.+|+++++++.|| ++|+++|| +|+|++++++++++.+.. ..|++||+
T Consensus 217 ~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~~G-~piga~~~~~~~~~~~~~--------~~~~~t~~ 287 (408)
T PRK04612 217 CDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALGGG-FPIGAMLAGPKVAETMQF--------GAHGTTFG 287 (408)
T ss_pred HHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhcCC-CceEEEEECHHHHhhhcC--------CCcCCCCC
Confidence 4478999999999999999999999999999999 68999999 599999999999887752 46899999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
++ ++|++++++ +++++ +++++++|++|+++|+++.++|+.+.+|||.|+|++|+|..+. .+....++.
T Consensus 288 ~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~-------~~~a~~i~~ 360 (408)
T PRK04612 288 GNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAH-------AGQAGAILD 360 (408)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCch-------hhHHHHHHH
Confidence 99 999999999 88865 8999999999999999999999999999999999999997421 134567889
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+.| .+++|+.|||++ +++|||++++++
T Consensus 361 ~l~~~Gvlv~~~g--~~~lRl~Ppl~i---t~eeid~~l~~l 397 (408)
T PRK04612 361 LAAEHGLLLLQAG--PDVLRFVPALNL---TDAELADGLARL 397 (408)
T ss_pred HHHHCCeEEeeCC--CCEEEEcCCccC---CHHHHHHHHHHH
Confidence 9999999998764 599999999999 479999999985
No 50
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.97 E-value=4e-30 Score=255.83 Aligned_cols=179 Identities=18% Similarity=0.180 Sum_probs=153.8
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||||||||||.+|+++++|+.|| ++|+|+||++|+|++++++++++.+.. ......+.|++||+
T Consensus 230 c~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~--~~~~~~~~~~~T~~ 307 (423)
T PRK05964 230 CDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYS--DDRAKAFMHSPSYT 307 (423)
T ss_pred HHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhc--CCcccccccCCCCC
Confidence 4578999999999999999999999999999999 589999998899999999999998752 11112356999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++. ++|.+.++||.|+|++++|..+.. ......+.+
T Consensus 308 ~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~-~~~~i~~vrg~Gl~~~i~l~~~~~------~~~~~~l~~ 380 (423)
T PRK05964 308 ANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFR-DLPGVADVRVLGAIGAVELDRPVL------ERDGPALRA 380 (423)
T ss_pred cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhc-cCCCeEEeecccEEEEEEeccCcc------hhHHHHHHH
Confidence 99 999999999 88865 8999999999999999985 588888999999999999964321 124567889
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+. ++++||.|||++ |++|||++++++
T Consensus 381 ~l~~~Gv~v~~~---~~~lR~~p~l~~---t~edId~~v~~l 416 (423)
T PRK05964 381 FALERGVLLRPL---GNTIYLMPPYII---TAEELDRITDAI 416 (423)
T ss_pred HHHHCCeEEEec---CCEEEEeCCccc---CHHHHHHHHHHH
Confidence 999999999874 479999999999 589999999986
No 51
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.97 E-value=7.9e-30 Score=255.99 Aligned_cols=179 Identities=25% Similarity=0.331 Sum_probs=156.2
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-.||++||+|||+|||||||.+|+++++|+.|| ++|+++|| +|+|++++++++++.+.. ..|.+||+
T Consensus 234 ~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitlsK~l~~G-~pigav~~~~~i~~~~~~--------~~~~~T~~ 304 (443)
T PRK08360 234 LDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKPLGGG-LPISATIGRAEIMDSLPP--------LAHAFTLS 304 (443)
T ss_pred HHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEecccccCC-ceeEEEEEcHHHHhhhcC--------CCCCCCCC
Confidence 3468999999999999999999999999999999 68999999 599999999999988753 46889999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
++ ++|++++++ +++++ +++++++|++|+++|+++..++|.+.+|||.|+|++|+|..++..+.+ +...+..+..
T Consensus 305 ~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~-~~~~~~~~~~ 383 (443)
T PRK08360 305 GNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKER-AYEEAAKVVW 383 (443)
T ss_pred cCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCc-cHHHHHHHHH
Confidence 99 999999999 88765 899999999999999999989999999999999999999865433222 2344667889
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++|+++.+. .++++||.|||++ |++|||++++++
T Consensus 384 ~l~~~Gi~~~~~--~~~~lr~~P~l~~---t~~~id~~~~~l 420 (443)
T PRK08360 384 RAWELGLIVTFF--SGNVLRIQPPLTI---EKEVLDEGLDIL 420 (443)
T ss_pred HHHHCCeEEeec--CCCEEEEeCCCCC---CHHHHHHHHHHH
Confidence 999999998764 3699999999999 589999999986
No 52
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.97 E-value=5.6e-30 Score=257.06 Aligned_cols=173 Identities=20% Similarity=0.192 Sum_probs=145.8
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+.-+||+|||+|||||||||||++|+++++||+|| ++|++ |++++++++++++.+.. ... ....|++||
T Consensus 254 lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l-----~~~a~l~~~~i~~~~~~-~~~--~~~~~~~T~ 325 (443)
T PRK08297 254 LCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKKT-----QVCGIMAGRRVDEVEDN-VFA--VSSRINSTW 325 (443)
T ss_pred HHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEEecccc-----cccceecchHHHHhhhh-hcc--CccccCCCC
Confidence 34578999999999999999999999999999999 67985 67777777777654321 000 123599999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCcee-eEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVG-DVRGKGLMIGVDLVQDKETKVPLNSRHMTHI 153 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~ 153 (329)
++| ++|++++++ +++++ +++++++|++|+++|+++.+++|.+. +|||.|+|++++|.+ ......+
T Consensus 326 ~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~---------~~~~~~~ 396 (443)
T PRK08297 326 GGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPT---------TADRDEV 396 (443)
T ss_pred CccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecC---------HHHHHHH
Confidence 999 999999999 88866 89999999999999999999999765 999999999999953 1345678
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
++.|+++||++.+++ .++++|.|||++ |++|||++++++
T Consensus 397 ~~~l~~~Gvl~~~~~--~~~lr~~P~l~~---t~~eid~~l~~l 435 (443)
T PRK08297 397 IRRLWEEGVLVLPCG--ERSIRFRPALTV---TTEEIDAAIDAL 435 (443)
T ss_pred HHHHHHCCEEEecCC--CCeEEEECCccC---CHHHHHHHHHHH
Confidence 999999999998864 479999999999 589999999985
No 53
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.97 E-value=6e-30 Score=255.62 Aligned_cols=175 Identities=16% Similarity=0.140 Sum_probs=152.0
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||++||+|||+|||||||++|+++++||.|| ++|+|+||++|++++++++++++.+.. .....+.|++||+
T Consensus 238 c~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~---~~~~~~~~~~T~~ 314 (427)
T TIGR00508 238 CKQYDILLIADEIATGFGRTGKLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKVAQTISS---GEAGCFMHGPTFM 314 (427)
T ss_pred HHHcCCEEEEeccccCCCcCCccchhhhcCCCCCEEEechhhhcCcccceEEEEcHHHHHHHhc---CCCCccccCCCCC
Confidence 4578999999999999999999999999999999 689999998899999999999998863 1111256999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++. .++.+.+|||.|+|++|+|..+. ....+..
T Consensus 315 g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~-~~~~i~~vrg~G~~~~i~~~~~~---------~~~~~~~ 384 (427)
T TIGR00508 315 GNPLACAVAEASLAILLEGEWQKQVSAIENQLKRELSPLR-KNPVVKDVRVLGAIGVVEMYKPV---------NVEELQK 384 (427)
T ss_pred cCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh-cCCCEEeEeccccEEEEEECCcc---------CHHHHHH
Confidence 99 999999999 88865 8999999999999999985 47778899999999999996321 1356889
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+. ++++++.||+++ |++|||++++++
T Consensus 385 ~l~~~Gv~~~~~---~~~l~~~ppl~~---t~~~id~~~~~l 420 (427)
T TIGR00508 385 KFVEQGVWIRPF---GKLIYVMPPYII---TTEQLQKLTAAL 420 (427)
T ss_pred HHHHCCeEEEec---CCEEEEECCCCC---CHHHHHHHHHHH
Confidence 999999999875 479999999998 589999999985
No 54
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.97 E-value=3.8e-30 Score=259.59 Aligned_cols=167 Identities=17% Similarity=0.266 Sum_probs=141.6
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCc--ch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQIC--RF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~--PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
+.-+||+|||+|||||||||||.+|+++++||+ || ++|+|+ ||+ +++ + +.++.. ..+.|+
T Consensus 280 lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~gG~-~~~----~-~~~~~~--------~~~~~~ 345 (464)
T TIGR00699 280 ITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAGY-FFH----D-PAFRPN--------KPYRQF 345 (464)
T ss_pred HHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEehhhhccCCc-ccc----c-hhccCC--------CCcccc
Confidence 345789999999999999999999999999997 99 689995 675 332 2 222111 135799
Q ss_pred hhhhcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCC-ceeeEE--eeceeeEEEeecCCCCCCCCChH
Q psy7882 77 LKISDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFA-IVGDVR--GKGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 77 ~T~agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p-~v~~VR--G~GLm~gIef~~d~~~~~p~~~~ 148 (329)
+||++| ++|++++++ +++++ +++++++|++|+++|+++.++|| .|.+|| |.|+|++|+|.. ..
T Consensus 346 ~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~---------~~ 416 (464)
T TIGR00699 346 NTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPD---------EA 416 (464)
T ss_pred cCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCC---------HH
Confidence 999999 999999999 88876 89999999999999999998999 799999 999999999842 23
Q ss_pred HHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
....+.+.|+++||++.++| .++|||.|||++ |++|||++++++
T Consensus 417 ~~~~i~~~~~~~Gvl~~~~g--~~~ir~~Ppl~i---t~~eid~~~~~l 460 (464)
T TIGR00699 417 KRDKLLKKARNNGVNIGGCG--VKAIRLRPMLVF---QKHHADIFLEII 460 (464)
T ss_pred HHHHHHHHHHHCCcEEecCC--CCeEEEeCCCCC---CHHHHHHHHHHH
Confidence 46779999999999998764 489999999999 589999999985
No 55
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.96 E-value=1.6e-29 Score=251.56 Aligned_cols=180 Identities=19% Similarity=0.208 Sum_probs=157.4
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-.||++||+|||+|||||+|.+|+++++|+.|| ++|+++|| +|+|++++++++++.+.. ..|++||+
T Consensus 227 c~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~lsK~l~~G-~pig~v~~~~~i~~~~~~--------~~~~~T~~ 297 (420)
T TIGR00700 227 CREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLITTAKSLADG-LPLSGVTGRAEIMDAPAP--------GGLGGTYA 297 (420)
T ss_pred HHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEEEeeccccCC-cceEEEEecHHHHhhcCC--------CCcCCCCC
Confidence 3468999999999999999999999999999999 68999999 599999999999987753 46899999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ .++++++|++|+++|+++.+++|.+.+|||.|+|++++|.++ ....| +......+.+
T Consensus 298 ~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~-~~~~~-~~~~~~~l~~ 375 (420)
T TIGR00700 298 GNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELVDP-GTTEP-DAGLAERIAT 375 (420)
T ss_pred cCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEeeccceEEEEEEecC-CCCCc-cHHHHHHHHH
Confidence 99 999999999 88765 889999999999999999999999999999999999999642 11122 2356778899
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+++..++++||.||+++ ++++|+++++++
T Consensus 376 ~~~~~Gv~i~p~~~f~~~lRl~p~l~~---~~~~l~~~~~~l 414 (420)
T TIGR00700 376 AAHAAGLLLLTCGMFGNIIRFLPPLTI---GDELLSEGLDIL 414 (420)
T ss_pred HHHHCCeEEeccCCCCCEEEEECCCCc---CHHHHHHHHHHH
Confidence 999999999987655799999999988 479999999875
No 56
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.96 E-value=8.7e-30 Score=254.31 Aligned_cols=179 Identities=13% Similarity=0.013 Sum_probs=148.5
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-.+|+|||+||||||| |||.+|+++++||+|| ++|+|+|| +|+||+++++++++.+.. . ....|++||+
T Consensus 230 c~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PDivt~gK~lggG-~Pi~av~~~~~i~~~~~~--~---~~~~~~~T~~ 302 (428)
T PRK12389 230 AHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPDLTALGKIIGGG-LPIGAYGGRKDIMEQVAP--L---GPAYQAGTMA 302 (428)
T ss_pred HHHcCCEEEEEcccccc-ccCcchhhHHhCCCCCeeeechhhcCC-CceeEEeEHHHHHhhhcc--C---CCcccccCCc
Confidence 34689999999999999 9998899999999999 68999999 599999999999998752 1 1257999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCC----CCCChHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETK----VPLNSRHM 150 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~----~p~~~~~~ 150 (329)
+| ++|++++++ +++++ +++++++|++|+++|++++++||.+.++ ||.| |++++|..++... .+-+....
T Consensus 303 gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~~~ 381 (428)
T PRK12389 303 GNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVYFTDEKVTNYDQAERSDGEAF 381 (428)
T ss_pred cCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEEEeCCCCCChhhhcccCHHHH
Confidence 99 999999999 88865 8999999999999999999999988887 7777 8899997543210 00122456
Q ss_pred HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..++..|+++||++.+.+ .++ +.||+++ |++|||++++++
T Consensus 382 ~~~~~~l~~~Gv~~~~~~--~~~--~~~~l~~---t~e~id~~~~~l 421 (428)
T PRK12389 382 GKFFKLMLNQGINLAPSK--YEA--WFLTTAH---TEEDIEETLEAV 421 (428)
T ss_pred HHHHHHHHHCCcEeecCC--CCC--eeecCCC---CHHHHHHHHHHH
Confidence 788999999999998764 233 3589988 589999999985
No 57
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.96 E-value=1.7e-29 Score=249.23 Aligned_cols=173 Identities=16% Similarity=0.209 Sum_probs=152.5
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
...||++||+|||+|||||||.+|+++++||+|| ++|+++|| +|+|++++++++++.+.. ..|++||+
T Consensus 209 c~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t~~K~lggG-~pigav~~~~~i~~~~~~--------~~~~~t~~ 279 (397)
T TIGR03246 209 CDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSAKALGGG-FPIGAMLTTTEIAAHLKV--------GTHGTTYG 279 (397)
T ss_pred HHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEEeehhhhCC-cceeEEEEcHHHHHhccC--------CCcCCCCC
Confidence 4578999999999999999999999999999999 68999999 599999999999988752 46889999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ ++++++++++|+++|+++..+++.+.+|||.|+|++++|.++. ......++.
T Consensus 280 ~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~-------~~~~~~~~~ 352 (397)
T TIGR03246 280 GNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAY-------QGKAKQFVN 352 (397)
T ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCch-------hhHHHHHHH
Confidence 99 999999998 77754 7999999999999999998889989999999999999996421 134567889
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++|+++.+.| .+++|+.||+++ |++|||++++++
T Consensus 353 ~l~~~Gv~~~~~g--~~~lR~~p~~~~---t~~~i~~~~~~l 389 (397)
T TIGR03246 353 AAAEEGVIALIAG--PNVVRFAPSLVI---SDDDIDEGLARF 389 (397)
T ss_pred HHHHCCeEEeecC--CCEEEEeCCCCC---CHHHHHHHHHHH
Confidence 9999999998764 489999999998 589999999985
No 58
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.96 E-value=3.5e-29 Score=251.37 Aligned_cols=182 Identities=20% Similarity=0.285 Sum_probs=158.2
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+.-+||++||+|||+|||||+|.+|+++++++.|| ++|+++|| +|+|++++++++++.+.. ..|++||
T Consensus 248 l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~sK~l~~G-~pig~v~~~~~i~~~~~~--------~~~~~T~ 318 (451)
T PRK06918 248 ICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVSKSLGAG-VPISGVIGRKEIMDESAP--------GELGGTY 318 (451)
T ss_pred HHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeeehhhcCC-CccEEEEEcHHHHhccCC--------CCcCcCC
Confidence 34568999999999999999999999999999999 68999999 599999999999987753 4689999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
++| ++|++++++ +++++ .++++++|++|+++|+++.++|+.+.+|||.|+|+++++..++..+.| +......+.
T Consensus 319 ~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~~-~~~~~~~l~ 397 (451)
T PRK06918 319 AGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEP-DKTLTANIC 397 (451)
T ss_pred CcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCCC-cHHHHHHHH
Confidence 999 999999999 88865 789999999999999999888998999999999999999744322222 234677889
Q ss_pred HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.|+++||++.+++..++++||.||+++ ++++||++++++
T Consensus 398 ~~~~~~Gvlv~~~~~~~~~lrl~p~l~~---t~~~id~~l~~l 437 (451)
T PRK06918 398 KEANKRGLLLLSAGTYGNVIRVLMPLVI---TDEQLEEGLTII 437 (451)
T ss_pred HHHHHCCeEEeecCCCCCEEEEECCCcc---CHHHHHHHHHHH
Confidence 9999999999986555699999999988 589999999985
No 59
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.96 E-value=4.3e-29 Score=249.01 Aligned_cols=172 Identities=17% Similarity=0.234 Sum_probs=149.3
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcC-CccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKG-SFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgG-G~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
.-+||++||+|||||||||||.+|+++++|+.|| ++|+|+| | +|+|++++++++. .+. ...|++||
T Consensus 228 c~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~t~~K~l~~~G-~pigav~~~~~i~-~~~--------~~~~~~T~ 297 (425)
T PRK09264 228 CRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIVTLSKSISGYG-LPMALVLIKPELD-VWK--------PGEHNGTF 297 (425)
T ss_pred HHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEEEeccccCCCc-cceEEEEEchhhh-ccC--------CCccCCCC
Confidence 4568999999999999999999999999999999 6899999 7 6999999999874 443 24689999
Q ss_pred hcc-HHHHHHHHh--hHHhH---HHHHHHHHHHHHHHHHHHHHhCCc-eeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 80 SDT-VRPHVQIKK--SVLER---FVHTYVVGNFLLTHLSKLREEFAI-VGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 80 agn-lA~aaala~--~ile~---le~v~~lG~~L~~gL~eL~~~~p~-v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
++| ++|++++++ +++++ +++++++|++|+++|+++.+++|. +.+|||.|+|++++|.+ ......
T Consensus 298 ~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~---------~~~~~~ 368 (425)
T PRK09264 298 RGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGD---------GELAGK 368 (425)
T ss_pred CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecC---------hHHHHH
Confidence 999 999998887 45544 789999999999999999888985 58999999999999953 234667
Q ss_pred HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.+.|+++||++.+++..+++|+|.|||++ |++||+++++++
T Consensus 369 l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~---t~~ei~~~~~~l 410 (425)
T PRK09264 369 IAAEAFENGLIIETSGPEDEVVKLLPPLTI---DEEELEEGLDIL 410 (425)
T ss_pred HHHHHHHCCCEEeccCCCCCEEEEeCCCCC---CHHHHHHHHHHH
Confidence 899999999999887666789999999999 489999999985
No 60
>PLN00144 acetylornithine transaminase
Probab=99.96 E-value=9.6e-29 Score=243.39 Aligned_cols=170 Identities=16% Similarity=0.239 Sum_probs=151.5
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||++||+|||+|||||+|.+|+++++++.|| ++|+|+|| +|+|++++++++++.+.. ..|++||+
T Consensus 197 ~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~sK~l~~G-~pig~v~~~~~~~~~~~~--------~~~~~T~~ 267 (382)
T PLN00144 197 CDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLAGG-LPIGAVLVTEKVASAINP--------GDHGSTFA 267 (382)
T ss_pred HHHcCCEEEEechhhCCCccchHhhhhhcCCCCCEEEecccccCC-cceEEEEEcHHHHhccCC--------CCCCCCCC
Confidence 4468999999999999999999999999999999 68999999 599999999999988753 46899999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|++++++ +++++ .++++++|++|++.|+++..+||.+.+|||.|+|++++|.. . ...+..
T Consensus 268 ~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~G~~~~l~l~~-~----------~~~~~~ 336 (382)
T PLN00144 268 GGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGVGLLVGIQLDV-P----------AGPLVD 336 (382)
T ss_pred CCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceeeecCceEEEEEecC-c----------cHHHHH
Confidence 99 999999999 88876 78999999999999999988999899999999999999931 1 245888
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+++. +++|||.||++++ ++||+++++++
T Consensus 337 ~~~~~Gv~i~~~~~-~~~lrl~p~~~~~---~~~i~~~~~~l 374 (382)
T PLN00144 337 ACRDSGLLVLTAGK-GDVVRLVPPLVIS---EAELEQAVEIL 374 (382)
T ss_pred HHHHCCeEEeecCC-CCEEEEeCCCccC---HHHHHHHHHHH
Confidence 99999999988653 5999999999884 79999999985
No 61
>KOG1401|consensus
Probab=99.96 E-value=8.3e-29 Score=240.87 Aligned_cols=176 Identities=17% Similarity=0.072 Sum_probs=141.0
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
...+|++||+|||||||||+|..||++++|++|| ++|.|+|| +|+||++++++||+.+.+ + .+..||+||+
T Consensus 236 C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~gG-lPigA~~v~~kV~~~i~~---~--~~l~hg~Tf~ 309 (433)
T KOG1401|consen 236 CDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLGGG-LPIGATGVRDKVAEMISP---G--DHLYHGGTFS 309 (433)
T ss_pred HhhcCceEEeehhhhCccccchHHHHHHhCcCCcceeehhhccCC-ceeEEEeehHHHHhhcCC---C--CccccCcccC
Confidence 3468999999999999999999999999999999 68999999 699999999999999875 1 1378999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceee-EEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGD-VRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~-VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
|| ++|.++..+ +.+.+ ++++..+|+.|++.|.+...+++.... .+|+|+++|++|..+.. .+.
T Consensus 310 gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~-----------~~~ 378 (433)
T KOG1401|consen 310 GNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVY-----------KFA 378 (433)
T ss_pred CChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeechh-----------hhh
Confidence 99 999999998 76655 899999999999999999988886444 49999999999975321 133
Q ss_pred HHHHHCCceeeccCC--CCCEEEEeC--ccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGL--SGNTLTALQ--PKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~--~~nvIrl~P--PL~It~~t~eeId~~l~~~ 197 (329)
..+.+.|++....+. ..+.+++.| ++++ +|++|++...+++.
T Consensus 379 d~~~~~~ll~~~~~~~~~~~gv~i~P~~~l~~-~~~~E~i~~~l~i~ 424 (433)
T KOG1401|consen 379 DAAREQGLLILTLGKGLLEEGVRIAPIYLLTV-EHTPEVIQRLLTIL 424 (433)
T ss_pred hhhhhhhHHHHHHhcccccceEEEeccccccc-cCcHHHHHHHHHHH
Confidence 333444444433221 135688888 5555 45789999999874
No 62
>PRK07046 aminotransferase; Validated
Probab=99.96 E-value=3.3e-28 Score=244.97 Aligned_cols=183 Identities=11% Similarity=-0.024 Sum_probs=148.2
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhh-ccCCCCccchhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKY-QILKTPAHKLKI 79 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~-~~~~~~~hg~T~ 79 (329)
.-+||+|||+||||| | |+|..++++++||+|| ++|+|+|| +|+||+++++++|+.+.+... .....+.|++||
T Consensus 248 c~~~g~llI~DEV~t-f-r~g~Gg~~~~~gv~PDi~t~gK~lggG-~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~ 324 (453)
T PRK07046 248 TRRYGTLLVIDETHT-I-SSGPGGYTRAHGLEPDFLVVGKPIAGG-VPCAVYGFSAELAERAQAAKASAPPGHSGIGTTL 324 (453)
T ss_pred HHHhCCEEEEEcccc-C-ccCCcchhHHhCCCccceeehhhhcCC-CcceeeeehHHHHHHHhhccccCCCCCceeCCCC
Confidence 446899999999999 5 5666667888999999 68999999 599999999999998853100 001124689999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC-----CCCChHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK-----VPLNSRH 149 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~-----~p~~~~~ 149 (329)
++| ++|++++++ +++++ +++++++|++|+++|+++..+++.+.+|||.|+|++++|..++... .+.+...
T Consensus 325 ~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~ 404 (453)
T PRK07046 325 SANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPEL 404 (453)
T ss_pred cccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHH
Confidence 999 999999999 88865 8999999999999999999999999999999999999996432210 1112345
Q ss_pred HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...++..|+++||++.+. ++.+++.|| ||++|||++++++
T Consensus 405 ~~~~~~~~~~~Gv~~~~~---~~~~~~~p~-----~t~~did~~~~~~ 444 (453)
T PRK07046 405 EAALHLYLLNRGVLITPF---HNMMLVCPA-----TTAADVDRLVAAF 444 (453)
T ss_pred HHHHHHHHHHCCCEEecc---cCcEEEeCC-----CCHHHHHHHHHHH
Confidence 677889999999999873 467788886 4789999999986
No 63
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.96 E-value=1.9e-28 Score=244.94 Aligned_cols=173 Identities=20% Similarity=0.211 Sum_probs=145.0
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+.-+||+|||+|||||||||||.+|+++++||+|| ++|++ |+++++.++++++.... ... ....|++||
T Consensus 247 lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK~~-----~~~g~~~~~~i~~~~~~-~~~--~~~~~~~T~ 318 (431)
T TIGR03251 247 LCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKT-----QVCGIMAGRRVDEVADN-VFA--VPSRLNSTW 318 (431)
T ss_pred HHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEEecccC-----ccceEEecchHHHhhhh-ccc--CccccCCCC
Confidence 34578999999999999999999999999999999 56874 77777777776543321 000 123589999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCC-ceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFA-IVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI 153 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p-~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~ 153 (329)
++| ++|++++++ +++++ +++++++|++|+++|++++++++ .+.+|||.|+|++++|.. ......+
T Consensus 319 ~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~---------~~~~~~~ 389 (431)
T TIGR03251 319 GGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPS---------TADRDEV 389 (431)
T ss_pred CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCC---------HHHHHHH
Confidence 999 999999999 88866 68999999999999999988999 899999999999999952 1345678
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.|+++||++.+.+ .+++||.|||++ |++|||++++++
T Consensus 390 ~~~l~~~Gvl~~~~g--~~~lr~~P~l~~---t~~eid~~l~~l 428 (431)
T TIGR03251 390 IRQLYREGVLLLGCG--ERSIRFRPPLTV---TREEIDAAIDAI 428 (431)
T ss_pred HHHHHhCCeEEecCC--CCeEEEECCccC---CHHHHHHHHHHH
Confidence 899999999998754 489999999998 589999999985
No 64
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.96 E-value=5.3e-29 Score=241.75 Aligned_cols=123 Identities=23% Similarity=0.344 Sum_probs=113.8
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
-+||+|||+|||||||||||++|+++++||+|| ++|+|+|| +|+||+++++++++.+.+ ..|++||++
T Consensus 208 ~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~gK~l~gG-~p~sav~~~~~i~~~~~~--------~~~~~T~~g 278 (339)
T PF00202_consen 208 REHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFGKGLGGG-LPISAVLGSEEIMEAFQP--------GSHGSTFGG 278 (339)
T ss_dssp HHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEEGGGGTT-SSEEEEEEEHHHHTTSCT--------TSSTCTTTT
T ss_pred cccccceecccccccccccCCccceecccccCcccccccchhhh-hhcccccccchhhccccc--------ccccccccc
Confidence 468999999999999999999999999999999 68999999 799999999999987753 459999999
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEee
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLV 136 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~ 136 (329)
| ++|++++++ +++++ +++++++|++|+++|++|+++|+.+.+|||.|+|++|+|.
T Consensus 279 ~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 279 NPLSCAAALATLEILEEEDLLERVRELGERLREGLRELAARYPLIGEVRGIGLMIGIELV 338 (339)
T ss_dssp -HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEETTEEEEEES
T ss_pred chHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeCeEEEEEEE
Confidence 9 999999999 88877 8999999999999999999999999999999999999996
No 65
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.95 E-value=2.8e-28 Score=240.83 Aligned_cols=180 Identities=12% Similarity=0.030 Sum_probs=153.6
Q ss_pred CccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 2 DTTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 2 ~~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
.+|..+|+|||||||+||| |.+..+||++|||+|| ++|.||||+ |+||+.++++||+.+.+ .+ +..+++|
T Consensus 228 ~lt~e~G~lLI~DEViTGF-R~~~gGaq~~~gi~PDlttlGKiIGGGl-P~ga~gGr~eiM~~~~p--~g---~vyqaGT 300 (432)
T COG0001 228 ELTEEHGALLIFDEVITGF-RVALGGAQGYYGVEPDLTTLGKIIGGGL-PIGAFGGRAEIMEQLAP--LG---PVYQAGT 300 (432)
T ss_pred HHHHHcCcEEEEecchhhc-ccCCcccccccCcCcchhhhhhhhcCCc-ceeeeccHHHHHhhhCC--CC---CccccCC
Confidence 4688999999999999999 7777889999999999 689999996 99999999999998875 22 4688999
Q ss_pred hhcc-HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCC------C
Q psy7882 79 ISDT-VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPL------N 146 (329)
Q Consensus 79 ~agn-lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~------~ 146 (329)
|+|| ++|+|++++ +.+.+ ++++.++|++|+++|+++.++|+....|.+.|.|++|.|++.+.. .| +
T Consensus 301 ~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~--n~~da~~sd 378 (432)
T COG0001 301 LSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVR--NYADAKRSD 378 (432)
T ss_pred CCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCC--CHHHHHhhc
Confidence 9999 999999999 66653 899999999999999999999999999999999999999864321 12 1
Q ss_pred hHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+...++.+.|+++||++.|+. +.-.++++.|+++|||.++++.
T Consensus 379 ~~~~~~~~~~~l~~GV~l~ps~-------~ea~flS~ahte~di~~~~~a~ 422 (432)
T COG0001 379 VERFAKFFHHLLNRGVYLAPSQ-------FEAGFLSTAHTEEDIDRTLEAA 422 (432)
T ss_pred hHHHHHHHHHHHhCCcccCCcc-------ccceeeecccCHHHHHHHHHHH
Confidence 2345667779999999998863 2234788899999999999986
No 66
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.95 E-value=1.1e-27 Score=237.08 Aligned_cols=174 Identities=14% Similarity=0.193 Sum_probs=152.0
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+..+||++||+|||+|||||+|.+|+++++++.|| ++|+|+|| +|+|++++++++++.+.. ..|++||
T Consensus 212 l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t~sK~l~gG-~~ig~~~~~~~~~~~~~~--------~~~~~t~ 282 (406)
T PRK12381 212 LCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAKALGGG-FPIGAMLTTEKCASVMTV--------GTHGTTY 282 (406)
T ss_pred HHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEEehhhhhCC-CceEEEEEcHHHHhhcCC--------CCCCCCC
Confidence 34578999999999999999999999999999999 68999999 599999999999987753 5688999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
+++ ++|++++++ +++++ .+++++++++|.++|+++..+++.+.++||.|+|+++++.++. ......+.
T Consensus 283 ~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~-------~~~~~~~~ 355 (406)
T PRK12381 283 GGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEY-------AGKAKQIS 355 (406)
T ss_pred CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCch-------hhHHHHHH
Confidence 999 999999998 77765 7899999999999999998788888999999999999996421 12456788
Q ss_pred HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..|+++||++.+.+ .+++||.||+++ |++|||++++++
T Consensus 356 ~~l~~~Gv~v~~~g--~~~lRl~p~~~~---t~~~i~~~~~~l 393 (406)
T PRK12381 356 QEAAKAGVMVLIAG--PNVVRFAPALNI---SEEEITTGLDRF 393 (406)
T ss_pred HHHHHCCcEEeeCC--CCEEEEeCCccC---CHHHHHHHHHHH
Confidence 99999999998754 579999999998 479999999985
No 67
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.95 E-value=1.2e-27 Score=239.70 Aligned_cols=185 Identities=9% Similarity=0.015 Sum_probs=149.9
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||+|||+|||+||| |||.+|+++++||+|| ++|+|+|| +|+|++++++++++.+.. . ....|++||+
T Consensus 231 c~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~PDi~~~gK~lggG-~p~~av~~~~~i~~~~~~--~---~~~~~~~T~~ 303 (433)
T PRK00615 231 CRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPDITVYGKILGGG-LPAAAVVAHKSIMDHLAP--E---GTIFQAGTLS 303 (433)
T ss_pred HHHcCCEEEEEcccccc-cccHhHHHHhcCCCCCeEEEcccccCC-cceeeeeecHHHHhhhcC--C---CCcccCCCCc
Confidence 34689999999999999 9999999999999999 68999999 599999999999998752 1 1256899999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCc-eeeEEeeceeeEEEeecCCCC--CCCC--ChHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAI-VGDVRGKGLMIGVDLVQDKET--KVPL--NSRHM 150 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~-v~~VRG~GLm~gIef~~d~~~--~~p~--~~~~~ 150 (329)
+| ++|++++++ +++++ +++++++|++|+++|+++..+++. +..+| .|+|++|+|..++.+ +.+. +.+..
T Consensus 304 g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~ 382 (433)
T PRK00615 304 GNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAF 382 (433)
T ss_pred ccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHH
Confidence 99 999999999 98865 899999999999999999877543 77888 999999999854321 0010 23456
Q ss_pred HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhccccchhhh
Q psy7882 151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQS 204 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~~~~~~~~ 204 (329)
..+...|+++||++.+..+ +. .++...||++|||++++++. ..+.+
T Consensus 383 ~~~~~~l~~~Gv~~~~~~~-~~------~~ls~~ht~~did~~~~a~~-~~~~~ 428 (433)
T PRK00615 383 QTFYQSAFSKGVYLSPSPF-EA------SFLSSAHSMENLDYAQNVLI-DSLEK 428 (433)
T ss_pred HHHHHHHHHCCeeecCccc-cc------cceecCCCHHHHHHHHHHHH-HHHHH
Confidence 7899999999999987431 11 25677899999999999863 34443
No 68
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.95 E-value=1.5e-27 Score=241.56 Aligned_cols=177 Identities=12% Similarity=0.022 Sum_probs=143.9
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
++-.||+|||+|||+||| |+|.+|+++++||+|| ++|+|+|| +|+||+++++++|+.+.. . ..+.|++||
T Consensus 275 lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PDi~t~gK~lggG-~Pigav~g~~ei~~~~~~--~---~~~~~~~T~ 347 (474)
T PLN02482 275 ITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPDLTTLGKVIGGG-LPVGAYGGRREIMEMVAP--A---GPMYQAGTL 347 (474)
T ss_pred HHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCCEEEecchhhCC-CceEEEEEcHHHHHhhcc--C---CCcccccCc
Confidence 345789999999999999 9999999999999999 68999999 599999999999998752 1 135799999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCc--e-eeEEeeceeeEEEeecCCCC-----CCCCC
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAI--V-GDVRGKGLMIGVDLVQDKET-----KVPLN 146 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~--v-~~VRG~GLm~gIef~~d~~~-----~~p~~ 146 (329)
++| ++|++++++ +++++ +++++++|++|+++|+++..+++. + .++|| |++++|..++.. ..+ +
T Consensus 348 ~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g---~~gi~f~~~~~~~~~~~~~~-d 423 (474)
T PLN02482 348 SGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISG---MFGFFFTEGPVYNFADAKKS-D 423 (474)
T ss_pred chhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccce---EEEEEEecCCccChhhhccC-C
Confidence 999 999999999 88865 899999999999999999888653 2 34444 999999764321 011 2
Q ss_pred hHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
......+.+.|+++||++.+.+. +. . .||+++ |++|||++++++
T Consensus 424 ~~~~~~~~~~l~~~Gv~~~~~~~-~~--~-~psl~h---t~~dId~~l~al 467 (474)
T PLN02482 424 TAKFARFHRGMLEEGVYLAPSQF-EA--G-FTSLAH---TEEDIDFTIAAA 467 (474)
T ss_pred HHHHHHHHHHHHHCCeEEeccCC-CC--C-cCCCCC---CHHHHHHHHHHH
Confidence 34567789999999999987542 11 1 388887 689999999986
No 69
>PLN02624 ornithine-delta-aminotransferase
Probab=99.95 E-value=6.3e-27 Score=236.77 Aligned_cols=177 Identities=16% Similarity=0.195 Sum_probs=153.2
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+..+||++||+|||||||||||.+|+++++++.|| ++|+++||++|+|++++++++++.+.+ ..|++||
T Consensus 253 lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~~--------~~~~~T~ 324 (474)
T PLN02624 253 LCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIKP--------GEHGSTF 324 (474)
T ss_pred HHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhcc--------CCcCCCC
Confidence 34578999999999999999999999999999999 689999998899999999999887653 5689999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCC-ceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFA-IVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI 153 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p-~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~ 153 (329)
+++ ++|++++++ +++++ .+++.+++++|+++|+++..+++ .+.+|||.|+|++|+|..+.. +......+
T Consensus 325 ~g~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~-----~~~~a~~~ 399 (474)
T PLN02624 325 GGNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKL-----GPVSAYDV 399 (474)
T ss_pred CCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCc-----ChHHHHHH
Confidence 999 999999998 87765 67899999999999999988898 478899999999999953210 12345678
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.|+++||++.+.+ +++|||.||+++ |++||+++++++
T Consensus 400 ~~~L~e~GV~v~p~~--~~~lR~~p~l~~---t~e~id~~l~~L 438 (474)
T PLN02624 400 CLKLKERGLLAKPTH--DTIIRLAPPLSI---SEDELQECSKAL 438 (474)
T ss_pred HHHHHhCCeEEecCC--CCEEEEECCccC---CHHHHHHHHHHH
Confidence 888999999998864 689999999998 589999999975
No 70
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=5e-26 Score=223.35 Aligned_cols=167 Identities=16% Similarity=0.215 Sum_probs=146.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
-.||++||+|||+|||||+|.+|+++++++.|| ++|+++|| +|+|++++++++++.+.. ..|++||++
T Consensus 214 ~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~t~sK~l~~G-~~ig~~~~~~~~~~~~~~--------~~~~~t~~~ 284 (398)
T PRK03244 214 DRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLAKGLGGG-LPIGACLAFGPAADLLTP--------GLHGSTFGG 284 (398)
T ss_pred HHcCCEEEEeccccCCcccchHHhhhhhCCCCCEEEEchhhhCC-cccEEEEEcHHHHhhccC--------CCCcCCCCC
Confidence 467999999999999999999999999999999 68999999 599999999999887752 468899999
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
| ++|+++++. +++++ .+++++++++|+++|+++ .+|.+.++||.|+|++++|..+ ....+.+.
T Consensus 285 ~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~v~g~g~~~~i~~~~~----------~~~~~~~~ 352 (398)
T PRK03244 285 NPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEAL--GHPLVDHVRGRGLLLGIVLTAP----------VAKAVEAA 352 (398)
T ss_pred CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhc--CCCceeeEeeccEEEEEEEecc----------HHHHHHHH
Confidence 9 999999998 87754 789999999999999987 4788889999999999999531 24568899
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|+++||++.+.+ .++||+.||+++ +++||+++++++
T Consensus 353 l~~~Gv~~~~~~--~~~iR~~p~~~~---t~~~i~~~~~~l 388 (398)
T PRK03244 353 AREAGFLVNAVA--PDVIRLAPPLII---TDAQVDAFVAAL 388 (398)
T ss_pred HHHCCeEEeecC--CCEEEEECCCcC---CHHHHHHHHHHH
Confidence 999999998753 589999999988 489999999986
No 71
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.93 E-value=1.9e-25 Score=218.90 Aligned_cols=169 Identities=19% Similarity=0.274 Sum_probs=148.3
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||+|||||+|.+|+++++|+.|| ++|++++| +|+|++++++++++.+.. ..|++||+
T Consensus 205 ~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G-~~ig~~~~~~~~~~~~~~--------~~~~~t~~ 275 (389)
T PRK01278 205 CDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAKGIGGG-FPLGACLATEEAAKGMTP--------GTHGSTYG 275 (389)
T ss_pred HHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEEehhccCC-cceEEEEEcHHHHhccCC--------CCCCCCCC
Confidence 4578999999999999999999999999999999 68999999 599999999999887753 56889999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCC-ceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFA-IVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p-~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
+| ++|++++++ +++++ .+++++++++++++|+++.++++ .+.++||.|+|+++++..+ ...+.
T Consensus 276 ~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~~-----------~~~~~ 344 (389)
T PRK01278 276 GNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVVP-----------NRDLV 344 (389)
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEecC-----------HHHHH
Confidence 99 999999888 77754 68899999999999999988888 7889999999999998531 34688
Q ss_pred HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.|+++||++.|.+ .+.+||.||+++ +++||+++++++
T Consensus 345 ~~l~~~GV~~~p~~--~~~lR~~p~~~~---~~~~i~~~l~~l 382 (389)
T PRK01278 345 QALRDEGLLTVGAG--DNVVRLLPPLII---TEEEIDEALERL 382 (389)
T ss_pred HHHHHCCeEEeecC--CCEEEEeCCccc---CHHHHHHHHHHH
Confidence 89999999998864 589999999988 479999999975
No 72
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.93 E-value=1.7e-25 Score=223.79 Aligned_cols=176 Identities=10% Similarity=-0.014 Sum_probs=141.8
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHh--hhhhhhccCCCCccchh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFEN--FIKIKYQILKTPAHKLK 78 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~--~~~~~~~~~~~~~hg~T 78 (329)
.-+||++||+|||+|||++++ +++++++||.|| ++|+|||| +|+|++++++++++. +.. ......+.|++|
T Consensus 213 c~~~g~lLI~DEv~tG~~~~~-~g~~~~~gv~PDi~t~gK~lggG-~p~~av~~~~~i~~~~~~~~--~~~~~~~~~~~T 288 (431)
T PRK06209 213 CHENGALFILDEMITGFRWHM-RGAQKLYGIVPDLSCFGKALGNG-FAVSALAGKREYMELGGLEH--TDRERVFLLSTT 288 (431)
T ss_pred HHHcCCEEEEEcccccCCcCc-chhhHHhCCCcceeeehhhhcCC-cccEEEEEHHHHHhhhcccc--cCCCCceeeccC
Confidence 446899999999999998864 455667999999 68999999 599999999999987 311 111123569999
Q ss_pred hhcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882 79 ISDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI 153 (329)
Q Consensus 79 ~agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~ 153 (329)
|++| ++|++++++ +++++ +++++++|++|+++|+++..+++.+.+|||.|+++++++..+...+.+ .......+
T Consensus 289 ~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~-~~~~~~~~ 367 (431)
T PRK06209 289 HGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQP-SQAFRTLF 367 (431)
T ss_pred CCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCC-cHHHHHHH
Confidence 9999 999999999 88876 899999999999999999989999999999999999999643211122 12345578
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCcccc-CcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLL-NYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~I-t~~t~eeId~~l~~~ 197 (329)
.+.|+++||++ ||+++ ..||++|||++++++
T Consensus 368 ~~~l~~~Gi~~-------------p~l~is~~ht~~dId~~l~~l 399 (431)
T PRK06209 368 LQETIRRGVLM-------------PSLVVSYAHGDADIERTIDAV 399 (431)
T ss_pred HHHHHHCCccc-------------ccccccccCCHHHHHHHHHHH
Confidence 88999999974 45533 578899999999986
No 73
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.93 E-value=6.3e-25 Score=219.04 Aligned_cols=179 Identities=12% Similarity=0.036 Sum_probs=149.0
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-.||++||+|||+||| |+|.+|+++++|+.|| ++|+++|| +|+|++++++++++.+.. . ....|++||+
T Consensus 227 ~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~~pDi~~~gK~l~~G-~p~ga~~~~~~i~~~~~~--~---~~~~~~~T~~ 299 (426)
T PRK00062 227 CDEHGALLIFDEVMTGF-RVALGGAQGYYGVTPDLTTLGKIIGGG-LPVGAFGGRREIMEQLAP--L---GPVYQAGTLS 299 (426)
T ss_pred HHHcCCEEEEeechhcc-ccCCccHHHHhCCCcchHhhhhHhhCC-CcceeeeEHHHHHHhhcc--C---CCceecccCc
Confidence 34689999999999999 9999999999999999 68999999 599999999999998852 1 1246889999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC-----CCCCChHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET-----KVPLNSRHM 150 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~-----~~p~~~~~~ 150 (329)
++ ++|++++++ +++++ ++++++++++++++|+++..+++.+.++||.|+|++++|..++.. +.+ +...+
T Consensus 300 ~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~-~~~~~ 378 (426)
T PRK00062 300 GNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKS-DTERF 378 (426)
T ss_pred CCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccc-cHHHH
Confidence 99 999999999 88765 899999999999999999999999999999999999999754221 111 22456
Q ss_pred HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..++..|+++||++.+.+ .+++++ ++++ |++|||++++++
T Consensus 379 ~~i~~~l~~~Gv~v~~~~--~~~~~~--~~~~---t~~ei~~~~~~l 418 (426)
T PRK00062 379 ARFFHAMLDEGVYLAPSQ--FEAGFV--SAAH---TDEDIEKTLEAA 418 (426)
T ss_pred HHHHHHHHHCCeEeecCC--cCceee--eccC---CHHHHHHHHHHH
Confidence 779999999999998864 355554 4666 689999999985
No 74
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.92 E-value=6.1e-25 Score=216.31 Aligned_cols=167 Identities=19% Similarity=0.266 Sum_probs=145.4
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
..||++||+|||+|||||+|.+|+++++++.|| ++|++++|++|+|++++++++++.+.. ..|++||++
T Consensus 217 ~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~--------~~~~~t~~~ 288 (396)
T PRK04073 217 KEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFTP--------GSHGSTFGG 288 (396)
T ss_pred HHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEecccccCCCCcceEEEEcHHHHhhhcC--------CCCCCCCCC
Confidence 457999999999999999999999999999999 689999998899999999999987752 468899999
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
| ++|++++++ +++++ .+++++++++|.++|+++ .++.+..+||.|+|+++++..+ ...+.+.
T Consensus 289 ~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l--~~~~i~~~~~~g~~~~~~~~~~-----------~~~~~~~ 355 (396)
T PRK04073 289 NPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEI--DNPMIKEVRGRGLFIGVELNEP-----------ARPYCEA 355 (396)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh--cCCcccceecceEEEEEEecch-----------HHHHHHH
Confidence 9 999999998 87754 689999999999999987 3567889999999999998521 3457888
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|+++||++.+.+ +++|||.||+++ |++|||++++++
T Consensus 356 l~~~Gv~~~~~~--~~~iRi~p~l~~---t~e~i~~~~~~l 391 (396)
T PRK04073 356 LKEEGLLCKETH--ETVIRFAPPLVI---TKEELDWAFEKI 391 (396)
T ss_pred HHHCCeEEecCC--CCEEEEECCccc---CHHHHHHHHHHH
Confidence 999999998753 589999999998 589999999975
No 75
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.92 E-value=1.1e-24 Score=214.76 Aligned_cols=173 Identities=20% Similarity=0.237 Sum_probs=147.7
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
...||++||+|||+|||||||.+++++++++.|| ++|+++||++|+|++++++++++.+.. ..|++||+
T Consensus 216 ~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~~--------~~~~~t~~ 287 (401)
T TIGR01885 216 CTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKP--------GEHGSTYG 287 (401)
T ss_pred HHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEEEeeccccCCCCCcEEEEEcHHHHhhccC--------CCCCCCCC
Confidence 4568999999999999999999999999999999 689999998899999999999987642 35778999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
++ ++|+++++. +++++ .+++++++++|+++|+++ .++.+.++||.|+|+++++..+.. ......+..
T Consensus 288 ~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~l--~~~~~~~~~g~g~~~~i~~~~~~~------~~~~~~l~~ 359 (401)
T TIGR01885 288 GNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKL--PKPIITEVRGRGLLNAIVIDESKT------GRTAWDLCL 359 (401)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhc--cCCceeEEeecCeeEEEEeccCcc------hhHHHHHHH
Confidence 99 999999988 87765 678999999999999988 357778999999999999954211 123567889
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|.++||++.+.+ ++++||.||+++ +++||+++++++
T Consensus 360 ~l~~~Gv~v~~~~--~~~lRi~p~l~~---t~~~i~~~l~~l 396 (401)
T TIGR01885 360 KLKEKGLLAKPTH--GNIIRLAPPLVI---TEEQLDEGLEII 396 (401)
T ss_pred HHHhCCEEEEecC--CCEEEEeCCccC---CHHHHHHHHHHH
Confidence 9999999998753 689999999988 589999999985
No 76
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.92 E-value=2.6e-24 Score=214.29 Aligned_cols=181 Identities=20% Similarity=0.288 Sum_probs=155.0
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||+++|+|||+||+||+|.+++++++++.|| ++|++++| +|+|++++++++++.+.. ..|++||+
T Consensus 229 ~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G-~rig~v~~~~~~~~~~~~--------~~~~~t~~ 299 (425)
T PRK08088 229 CDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGG-FPLAGVTGRAEVMDAIAP--------GGLGGTYA 299 (425)
T ss_pred HHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEEEeccccCC-CcceeeEecHHHHhhcCC--------CCCCCCCC
Confidence 3468999999999999999999999999999999 68999999 599999999999987753 45789999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
++ ++|+++++. +.++. +++++++++++++.|+++..++|.+.+|||.|+|++++|.++...+.| +......+.+
T Consensus 300 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~~~~p-~~~~~~~l~~ 378 (425)
T PRK08088 300 GNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKP-NAKLTAQIVA 378 (425)
T ss_pred cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEecCCCCCCC-CHHHHHHHHH
Confidence 99 999888888 66543 889999999999999999999999999999999999999654322222 2345678999
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+++..++++||.||+++ +++||++.++++
T Consensus 379 ~~~~~Gv~~~~~~~~~~~iRl~~~~~~---t~~ei~~~i~~l 417 (425)
T PRK08088 379 RARDKGLILLSCGPYYNVLRILVPLTI---EDAQIRQGLEII 417 (425)
T ss_pred HHHhCCCEEecCCCCCCEEEEECCCCc---CHHHHHHHHHHH
Confidence 999999998876655799999999988 479999999975
No 77
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.92 E-value=2.1e-24 Score=214.11 Aligned_cols=179 Identities=11% Similarity=0.037 Sum_probs=148.8
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||+||| |+|.+|+++++++.|| ++|++++| +|+|++++++++++.+.. . ....|++||+
T Consensus 225 ~~~~~~llI~DEv~~g~-r~g~~~~~~~~~~~pDi~t~sK~l~~G-~pig~v~~~~~i~~~~~~--~---~~~~~~~T~~ 297 (423)
T TIGR00713 225 TEEYGSLLIFDEVMTGF-RVALGGAQEYFGVEPDLTTLGKIIGGG-LPVGAFGGRREIMERLAP--E---GPVYQAGTLS 297 (423)
T ss_pred HHHhCCEEEEEcccccc-ccCcchhHHHhCCCcchhhhhhhhcCC-CceeeeeEHHHHHHhhCc--C---CCeeeccCCC
Confidence 44689999999999999 9999999999999999 68999999 599999999999988752 1 1246889999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC-----CCCChHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK-----VPLNSRHM 150 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~-----~p~~~~~~ 150 (329)
+| ++|++++++ +++++ ++++++++++++++|+++.++++.+.++||.|+|++++|..++... .+ +....
T Consensus 298 ~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~-~~~~~ 376 (423)
T TIGR00713 298 GNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKS-DTELF 376 (423)
T ss_pred CCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcc-cHHHH
Confidence 99 999999999 87765 7899999999999999999899999999999999999997532110 01 12345
Q ss_pred HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+...|+++||++.+.+ .+++++.|| + |++||+++++++
T Consensus 377 ~~~~~~l~~~Gv~v~~~~--~~~~~l~~~--~---t~~~i~~~~~~l 416 (423)
T TIGR00713 377 AKFFHEMLDKGVFLPPSQ--FEACFLSAA--H---TEEDIENTIEAA 416 (423)
T ss_pred HHHHHHHHHCCeEEecCC--ccceeeECC--C---CHHHHHHHHHHH
Confidence 678889999999987653 357888887 2 689999999975
No 78
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.90 E-value=1.9e-23 Score=204.85 Aligned_cols=174 Identities=17% Similarity=0.189 Sum_probs=148.7
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||+||+||+|.+++.+++++.|| ++|+++||++|+|++++++++++.+.. ..+++||+
T Consensus 208 ~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~--------~~~~~t~~ 279 (400)
T PTZ00125 208 CKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKP--------GEHGSTYG 279 (400)
T ss_pred HHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEEEcccccCCCcCcEEEEEcHHHHhhccC--------CCCCCCCC
Confidence 4578999999999999999999999999999999 689999997799999999999987652 35678999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
++ +++++++++ +.+++ .+++++++++++++|+++...++.+..+||.|+|.+++|..+. ......+.+
T Consensus 280 ~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~-------~~~~~~~~~ 352 (400)
T PTZ00125 280 GNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSD-------GVNAWDLCL 352 (400)
T ss_pred cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccCc-------chHHHHHHH
Confidence 99 889888887 77654 6789999999999999997778888889999999999985321 123456888
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+.+ ++++||.||+++ +++||+++++++
T Consensus 353 ~l~~~Gv~v~~~~--~~~lRi~~~~~~---~~~~i~~~l~~l 389 (400)
T PTZ00125 353 KLKENGLLAKPTH--DNIIRFAPPLVI---TKEQLDQALEII 389 (400)
T ss_pred HHHHCCeEEeecC--CCEEEEECCccC---CHHHHHHHHHHH
Confidence 9999999998753 689999999988 589999999986
No 79
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.90 E-value=2.7e-23 Score=202.39 Aligned_cols=169 Identities=19% Similarity=0.266 Sum_probs=146.6
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||+++|+|||+|||||+|.+++++++++.|| ++|++++| +|+|++++++++++.+.. ..|.+||+
T Consensus 197 ~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G-~~ig~v~~~~~~~~~~~~--------~~~~~t~~ 267 (377)
T PRK02936 197 CKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVTVAKGLGNG-IPVGAMIGKKELGTAFGP--------GSHGSTFG 267 (377)
T ss_pred HHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEEEEcccccCC-CccEEEEEcHHHHhhccC--------CCCCCCCC
Confidence 4578999999999999999999889899999999 68999999 599999999999987752 45788999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
++ ++|+++++. +.++. +++++++++++++.|+++..+++.+..++|.|+|+++++.++ ...+..
T Consensus 268 ~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~-----------~~~~~~ 336 (377)
T PRK02936 268 GNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTEE-----------VAPVIE 336 (377)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecch-----------HHHHHH
Confidence 99 999999888 76633 889999999999999997777888889999999999998631 345788
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|.++||++.+.+ .+.+||.||+++ ++++|++++++.
T Consensus 337 ~l~~~gv~v~~~g--~~~lRi~p~~~~---~~~~i~~~i~~l 373 (377)
T PRK02936 337 QLREEGLLVLSAG--PNVIRLLPPLVV---TKEELDQAVYLL 373 (377)
T ss_pred HHHHCCeEEecCC--CCEEEEECCccc---CHHHHHHHHHHH
Confidence 8999999998864 579999999998 589999999875
No 80
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.90 E-value=4.4e-23 Score=202.68 Aligned_cols=171 Identities=21% Similarity=0.280 Sum_probs=145.6
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
...||++||+|||+|||||+|.+|+.+++|+.|| ++|+|+||++|+|++++++++++.+.. ..|+.||+
T Consensus 217 ~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~--------~~~~~t~~ 288 (401)
T PRK00854 217 CTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKP--------GQHGSTFG 288 (401)
T ss_pred HHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEecccccCCccCeEEEEEcHHHHhcccC--------CCCCCCCC
Confidence 3568999999999999999999888889999999 689999998899999999999987642 46788999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
++ ++|+++++. +.+++ .+++++++++|.++|+++. .+.+.+++|.|+|+.+++..+. .....+.+
T Consensus 289 ~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~g~g~~~~i~~~~~~--------~~~~~~~~ 358 (401)
T PRK00854 289 GNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIR--SNIVREVRGRGLMLAVELEPEA--------GGARQYCE 358 (401)
T ss_pred cCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhc--cCceEEEeccceEEEEEEecCc--------hhHHHHHH
Confidence 99 999998888 77654 7899999999999999873 3456789999999999986421 12456889
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+.+ ++.+|+.||+++ +++||+++++++
T Consensus 359 ~L~~~GV~v~~~~--~~~lR~~p~~~~---t~e~i~~~i~~l 395 (401)
T PRK00854 359 ALKERGLLAKDTH--DHTIRLAPPLVI---TREQVDWALEQI 395 (401)
T ss_pred HHHHCCeEEecCC--CCEEEEeCCccc---CHHHHHHHHHHH
Confidence 9999999997653 589999999998 589999999985
No 81
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.90 E-value=4.9e-23 Score=201.07 Aligned_cols=169 Identities=19% Similarity=0.253 Sum_probs=146.9
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
...+|+++|+|||+|||||+|.+++++.+|+.|| ++|+|++| +|+|++++++++++.+.. ..|.+||+
T Consensus 195 ~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G-~~ig~~~~~~~~~~~~~~--------~~~~~t~~ 265 (375)
T PRK04260 195 CQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKGLANG-VPVGAMLAKSSLGGAFGY--------GSHGSTFG 265 (375)
T ss_pred HHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEEEecccccCC-cceEEEEEcHHHHhhcCC--------CCCCCCCC
Confidence 3458999999999999999999889999999999 68999999 599999999999877652 45889999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
++ ++|+++++. +.+++ ++++++.++++++.|+++..+++.+..++|.|+|++++|..+ ...+.+
T Consensus 266 ~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~ 334 (375)
T PRK04260 266 GNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETTAD-----------LSQLVE 334 (375)
T ss_pred cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEeccceEEEEEecCc-----------HHHHHH
Confidence 99 999988888 77653 789999999999999998888888889999999999999421 245889
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+.+ .+.+|+.||+++ +++||+++++++
T Consensus 335 ~l~~~Gi~v~~~~--~~~lR~~~~~~~---t~~~i~~~l~~l 371 (375)
T PRK04260 335 AARDKGLIVLTAG--TNVIRLLPPLTL---TKEEIEQGIAIL 371 (375)
T ss_pred HHHhCCCEEecCC--CCEEEEcCCCcc---CHHHHHHHHHHH
Confidence 9999999998764 489999999999 489999999875
No 82
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.89 E-value=2.1e-22 Score=198.79 Aligned_cols=174 Identities=14% Similarity=0.213 Sum_probs=148.1
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+..+||+++|+|||++||||+|.+++++++++.|| ++|++++| +|+|++++++++++.+.. ..|++||
T Consensus 213 l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G-~rig~vv~~~~i~~~l~~--------~~~~~t~ 283 (403)
T PRK05093 213 LCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTSAKALGGG-FPIGAMLTTAEIASHFKV--------GTHGSTY 283 (403)
T ss_pred HHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEEecccccCC-cceEEEEEcHHHHhhcCC--------CCCCCCC
Confidence 34578999999999999999999888899999999 68999999 599999999999987753 4678899
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
+++ ++|++++++ +++++ .+++++++++|.++|+++..+++.+.+++|.|+|+++++..+. ......++
T Consensus 284 ~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~-------~~~~~~~~ 356 (403)
T PRK05093 284 GGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQY-------KGRARDFL 356 (403)
T ss_pred CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcc-------hhHHHHHH
Confidence 988 888888887 66654 7889999999999999987777888899999999999995321 12356788
Q ss_pred HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..|+++||++.+.| .+.+|+.||+++ +++||+++++++
T Consensus 357 ~~l~~~Gv~v~~~g--~~~lRl~~~~~~---~~~~i~~~~~~l 394 (403)
T PRK05093 357 NAAAEEGVMVLVAG--PDVLRFAPSLVI---EEADIDEGLARF 394 (403)
T ss_pred HHHHHCCeEEecCC--CCEEEEeCCCCC---CHHHHHHHHHHH
Confidence 99999999998754 489999999997 589999999975
No 83
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.88 E-value=3.4e-22 Score=195.20 Aligned_cols=168 Identities=23% Similarity=0.323 Sum_probs=145.4
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
..||++||+|||++||||+|.+++++++++.|| ++|++++| +|+|++++++++++.+.. ..|.+||++
T Consensus 213 ~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t~sK~~~~G-~rig~~~~~~~~~~~~~~--------~~~~~t~~~ 283 (396)
T PRK02627 213 DENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTLAKGLGGG-VPIGAVLAKEKVADVFTP--------GDHGSTFGG 283 (396)
T ss_pred HHcCCEEEEechhcCCCccCceeeehhcCCCCCEEEEcchhhCC-cccEEEEEcHHHHhccCC--------CCCCCCCCC
Confidence 357999999999999999999889999999999 68999999 599999999999887652 457889999
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
+ ++|+++++. +.+++ .+++++++++++++|+++..++|.+..++|.|+|+++++.. ....+...
T Consensus 284 ~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~-----------~~~~~~~~ 352 (396)
T PRK02627 284 NPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELDR-----------PAAEIVKK 352 (396)
T ss_pred CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEecC-----------cHHHHHHH
Confidence 9 999998888 76644 78999999999999999988888888999999999999831 13568889
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|+++||++.+++ .+.+|+.||+.+ +++|+++++++.
T Consensus 353 l~~~Gv~v~~~~--~~~lRi~~~~~~---~~~~i~~~~~~l 388 (396)
T PRK02627 353 ALEKGLLINVTG--DNVLRLLPPLII---SKEEIDEAVDRL 388 (396)
T ss_pred HHHCCeEEeecC--CCEEEEECCccc---CHHHHHHHHHHH
Confidence 999999998864 578999999987 589999999975
No 84
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.87 E-value=1.4e-21 Score=191.35 Aligned_cols=181 Identities=27% Similarity=0.407 Sum_probs=150.5
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||+++|+|||++||||+|..++++++++.|| ++|++++| +|+|++++++++++.+.. ....|++||+
T Consensus 221 ~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~t~sK~l~~g-~~~g~~~~~~~~~~~~~~------~~~~~~~t~~ 293 (413)
T cd00610 221 CRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLGGG-LPLGAVLGREEIMDAFPA------GPGLHGGTFG 293 (413)
T ss_pred HHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeEEEcccccCc-cccEEEEEcHHHHHhhcc------CCCCCCCCCC
Confidence 3468999999999999999999889999999999 68999999 699999999999987610 1256789999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
++ ++++++++. +++++ .+++++++++++++|+++...++.+..+++.|+|+++++..+.....+ +......+.+
T Consensus 294 ~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~ 372 (413)
T cd00610 294 GNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPP-DKELAAKIIK 372 (413)
T ss_pred cCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCc-chHHHHHHHH
Confidence 99 888888888 77754 789999999999999998877788888999999999999754221111 1234567889
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+.+ ++.+|+.|++.. |++||+++++++
T Consensus 373 ~l~~~gv~v~~~~--~~~lR~~~~~~~---t~~~i~~~~~~l 409 (413)
T cd00610 373 AALERGLLLRPSG--GNVIRLLPPLII---TEEEIDEGLDAL 409 (413)
T ss_pred HHHHCCeEEeecC--CCEEEEECCCcC---CHHHHHHHHHHH
Confidence 9999999998854 689999999887 589999999875
No 85
>KOG1405|consensus
Probab=99.78 E-value=4.2e-19 Score=170.81 Aligned_cols=167 Identities=18% Similarity=0.232 Sum_probs=129.7
Q ss_pred CccccccceEEehhHhhchhccchhhhhcccCC--cch---HH-HhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 2 DTTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQI--CRF---VQ-KDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 2 ~~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV--~PD---i~-KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
|+|.+||+.+|+||||||-|-||++||+|||++ .|| ++ |-++|||+- . +.|.+ + .++.|
T Consensus 299 di~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q~gGffh-------~---~~frp--n---~pYri 363 (484)
T KOG1405|consen 299 DITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQTGGFFH-------D---EEFRP--N---EPYRI 363 (484)
T ss_pred HHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhhcCcccc-------C---cccCC--C---chHHH
Confidence 678899999999999999999999999999998 468 34 788898731 1 11221 1 12445
Q ss_pred chhhhcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCc-eeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 76 KLKISDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAI-VGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 76 g~T~agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~-v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
-.||-|. --+.-.-+. +++++ +++++..|+.|.++|.+|+++||. +..+||+|.++++++.. ...
T Consensus 364 fNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps---------~~~ 434 (484)
T KOG1405|consen 364 FNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPS---------GSI 434 (484)
T ss_pred hhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCC---------hHH
Confidence 5778777 222222222 55544 889999999999999999999995 78999999999999964 245
Q ss_pred HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...++..++-+||-+..|| ...|||.|.|+..+ ...+-+++++
T Consensus 435 Rdk~i~~~~~nGv~~GGCg--~~siRfRPsLvf~~---~Ha~i~l~~~ 477 (484)
T KOG1405|consen 435 RDKLILIARLNGVNLGGCG--DKSIRFRPSLVFRK---HHADIFLDIF 477 (484)
T ss_pred HHHHHHHHHHcCceecccc--cceeeeccceeehh---hhHHHHHHHH
Confidence 7789999999999999887 57899999999964 4666677664
No 86
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.71 E-value=3.3e-17 Score=162.10 Aligned_cols=182 Identities=11% Similarity=0.028 Sum_probs=126.9
Q ss_pred cccccceEEehhHhh--chhccchhhhhcccCCcc----hH-HHhhcCCcccc-ceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 4 TYYRDCGVVVSAVDF--GSGDNGTYLGFQCLQICR----FV-QKDFKGSFWDK-LIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 4 ~~~~giLLI~DEVqT--GfGRTG~~fA~e~~GV~P----Di-~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..+||++||+||+++ ++|++|. |+++++|+.| |+ .=++++|+.|+ |++++++++++.+.. ..|
T Consensus 164 ~~~~g~~livDe~~~~g~~g~~G~-g~~~~~g~~p~~~~Div~~slsk~~g~~gg~v~~~~~~~~~~~~--------~~~ 234 (392)
T PLN03227 164 KEEFHYRLILDESFSFGTLGKSGR-GSLEHAGLKPMVHAEIVTFSLENAFGSVGGMTVGSEEVVDHQRL--------SGS 234 (392)
T ss_pred HHHcCCEEEEECcccccccCCCCC-cHHHHcCCCCCCCceEEEeechhhhhccCcEEecCHHHHHHHHH--------hCc
Confidence 346899999999998 5667776 6899999999 82 11233332255 556789998876642 457
Q ss_pred chhhhcc---HHHHHHHHh--hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEee--------ceeeEEEeecCC
Q psy7882 76 KLKISDT---VRPHVQIKK--SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK--------GLMIGVDLVQDK 139 (329)
Q Consensus 76 g~T~agn---lA~aaala~--~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~--------GLm~gIef~~d~ 139 (329)
+.||+++ ..|+++++. .++++ ++++++++++|+++|++ ..+|.+.+|||. |+|++|++.+++
T Consensus 235 ~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~--~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~ 312 (392)
T PLN03227 235 GYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTN--SSHPYALKLRNRLVITSDPISPIIYLRLSDQE 312 (392)
T ss_pred CccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh--cCCccccccccccccCCCCCCCEEEEEeCCHH
Confidence 7888886 345555544 33322 78899999999999987 467889999984 457999996432
Q ss_pred CCCCCCC-hHHHHHHHHHHHHCCceeeccCCC-CCEEEEeCcccc-----CcCCHHHHHHHHhcc
Q psy7882 140 ETKVPLN-SRHMTHILDSCKEHGLLLGRGGLS-GNTLTALQPKLL-----NYWTDFVGTPCLDCE 197 (329)
Q Consensus 140 ~~~~p~~-~~~~~~~~~~l~e~GVLl~~~G~~-~nvIrl~PPL~I-----t~~t~eeId~~l~~~ 197 (329)
... +++ ......+.+.|+++|+++.+.+.. ...+++.||+++ ..||++|||++++++
T Consensus 313 ~~~-~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l 376 (392)
T PLN03227 313 ATR-RTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVL 376 (392)
T ss_pred Hhh-hhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence 211 111 123467899999999999765411 123467788876 456789999999986
No 87
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.71 E-value=1.5e-16 Score=154.33 Aligned_cols=167 Identities=21% Similarity=0.327 Sum_probs=135.9
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
..+|+++|+||+++|||++|..++++.+++.|| ++|++++| +|+|++++++++++.+.. ..++.+|++
T Consensus 201 ~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~t~sK~~~~G-~riG~~~~~~~~~~~~~~--------~~~~~~~~~ 271 (379)
T TIGR00707 201 KDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDIITLAKGLGGG-VPIGATLAKEEVAEAFTP--------GDHGSTFGG 271 (379)
T ss_pred HHcCCEEEEeccccCCCccchhhhHHhcCCCCCEEEEcccccCC-cccEEEEEcHHHHhhhcC--------CCCCCCCCC
Confidence 357999999999999999998777778899999 68999988 599999999999887753 346677888
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
+ ++++++.+. +.+++ .+++++++++++++|+++...++. ..+++.|.++.+++..+ ...+.+.
T Consensus 272 ~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~g~~~~~~~~~~-----------~~~~~~~ 339 (379)
T TIGR00707 272 NPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNYPN-KEVRGKGLMLGIELEAP-----------CKDIVKK 339 (379)
T ss_pred CHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhCCC-CccccCceEEEEEecCc-----------HHHHHHH
Confidence 8 888777766 65543 678999999999999987555543 56778899999987531 2457888
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|.++||++.+.+ .+.+|+.|+++. +++++++++++.
T Consensus 340 l~~~Gv~v~~~~--~~~lRi~~~~~~---t~~~i~~~~~~l 375 (379)
T TIGR00707 340 ALEKGLLVNCAG--PKVLRFLPPLII---TKEEIDEAVSAL 375 (379)
T ss_pred HHHCCcEEeeCC--CCEEEEECCCcC---CHHHHHHHHHHH
Confidence 999999999854 478999999887 589999999875
No 88
>PRK07505 hypothetical protein; Provisional
Probab=99.53 E-value=8.8e-14 Score=137.29 Aligned_cols=168 Identities=12% Similarity=-0.029 Sum_probs=117.3
Q ss_pred ccccceEEehhHh--hchhccchhhhhcccCC-cch-------HHHhhcCCccccceee-echhHHHhhhhhhhccCCCC
Q psy7882 5 YYRDCGVVVSAVD--FGSGDNGTYLGFQCLQI-CRF-------VQKDFKGSFWDKLIVH-TSTCTFENFIKIKYQILKTP 73 (329)
Q Consensus 5 ~~~giLLI~DEVq--TGfGRTG~~fA~e~~GV-~PD-------i~KaLgGG~~PigAv~-~~~eI~d~~~~~~~~~~~~~ 73 (329)
..+|++||+||++ +|+||+|.+++.+++++ .|| ++|++++|. |.++ .++++.+.+.. .
T Consensus 206 ~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~--------~ 274 (402)
T PRK07505 206 EKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGDAEQIELILR--------Y 274 (402)
T ss_pred HHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCCHHHHHHHHH--------h
Confidence 4579999999997 89999999888899998 888 479988642 3344 46788877753 4
Q ss_pred ccchhhhcc---HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 74 AHKLKISDT---VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 74 ~hg~T~agn---lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
.|+.||+++ ++|+++++. +++.+ +.+.++.+++++.+..+... ....++|.|+++......+ ...
T Consensus 275 ~~~~t~~~~~~~~a~aa~~a~l~~~~~-~~~~~~~~~l~~~~~~~~~~--~~~~~~g~~~~i~~~~~~~--------~~~ 343 (402)
T PRK07505 275 AGPLAFSQSLNVAALGAILASAEIHLS-EELDQLQQKLQNNIALFDSL--IPTEQSGSFLPIRLIYIGD--------EDT 343 (402)
T ss_pred CCCceeCCCCCHHHHHHHHHHHHHHhc-cCcHHHHHHHHHHHHHHHHH--HHhcCCCCCCCEEEEEeCC--------HHH
Confidence 577888776 578887777 65432 22334455566655543221 1234688888764432221 123
Q ss_pred HHHHHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|+++||++.++. ...+.|||+||+++ |++|++++++++
T Consensus 344 ~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~---t~eei~~~~~~l 393 (402)
T PRK07505 344 AIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASH---TNDEIKRLCSLL 393 (402)
T ss_pred HHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccC---CHHHHHHHHHHH
Confidence 5678899999999998752 12379999999998 589999999985
No 89
>PLN02822 serine palmitoyltransferase
Probab=99.39 E-value=2.9e-12 Score=130.37 Aligned_cols=174 Identities=12% Similarity=0.021 Sum_probs=119.1
Q ss_pred ccccccceEEehhHhh--chhccchhhhhcccCC---cch-----HHHhhc--CCccccceeeechhHHHhhhhhhhccC
Q psy7882 3 TTYYRDCGVVVSAVDF--GSGDNGTYLGFQCLQI---CRF-----VQKDFK--GSFWDKLIVHTSTCTFENFIKIKYQIL 70 (329)
Q Consensus 3 ~~~~~giLLI~DEVqT--GfGRTG~~fA~e~~GV---~PD-----i~KaLg--GG~~PigAv~~~~eI~d~~~~~~~~~~ 70 (329)
+..+||++||+||+++ .+|++|.. .++++|+ .|| ++|+++ ||+ +++++++++.+..
T Consensus 270 l~~k~~~~LIvDEa~s~gvlG~~G~G-~~e~~~v~~~~~dii~~s~sKalg~~GG~-----i~g~~~ii~~~~~------ 337 (481)
T PLN02822 270 LKEKYRFRVLLDESNSFGVLGKSGRG-LSEHFGVPIEKIDIITAAMGHALATEGGF-----CTGSARVVDHQRL------ 337 (481)
T ss_pred HHHHcCCEEEEECCccccccCCCCCC-hHHHcCCCCCCCeEEEecchhhhhhCCeE-----EEcCHHHHHHHHh------
Confidence 3457899999999999 67888875 6899999 678 569998 764 6689999987652
Q ss_pred CCCccchhhhcc---HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC
Q psy7882 71 KTPAHKLKISDT---VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK 142 (329)
Q Consensus 71 ~~~~hg~T~agn---lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~ 142 (329)
..|+.||+++ ..+++++++ +.+++ .+++++++++|+++|+++. +.....-+.+.++.+.+.......
T Consensus 338 --~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~---g~~~~~~~~spi~~l~l~~~~~~~ 412 (481)
T PLN02822 338 --SSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIP---GLSIGSNTLSPIVFLHLEKSTGSA 412 (481)
T ss_pred --cCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCCCEEEEEeCCCcccc
Confidence 4678899886 455666666 55533 7788999999999998752 211111245677777774311100
Q ss_pred CCCChHHHHHHHHHHH-HCCceeeccCC-------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 143 VPLNSRHMTHILDSCK-EHGLLLGRGGL-------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 143 ~p~~~~~~~~~~~~l~-e~GVLl~~~G~-------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
. -+......+.+.|+ ++||++.+... .+..+|++ +...||++||++++++.
T Consensus 413 ~-~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~---is~~~t~edI~~~~~~l 471 (481)
T PLN02822 413 K-EDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLF---VSAGHTESDILKASESL 471 (481)
T ss_pred c-chHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEE---ECCCCCHHHHHHHHHHH
Confidence 0 01234567889988 88999986421 12346664 23456899999999985
No 90
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.34 E-value=1.4e-11 Score=121.76 Aligned_cols=162 Identities=14% Similarity=0.044 Sum_probs=113.8
Q ss_pred ccccceEEehhHhh-ch-hccchhhhhcccCCc--ch-----HHHhhc--CCccccceeeechhHHHhhhhhhhccCCCC
Q psy7882 5 YYRDCGVVVSAVDF-GS-GDNGTYLGFQCLQIC--RF-----VQKDFK--GSFWDKLIVHTSTCTFENFIKIKYQILKTP 73 (329)
Q Consensus 5 ~~~giLLI~DEVqT-Gf-GRTG~~fA~e~~GV~--PD-----i~KaLg--GG~~PigAv~~~~eI~d~~~~~~~~~~~~~ 73 (329)
..+|+++|+||+|+ |+ |++|..+ .+++++. || ++|+++ ||+ +++++++.+.+.. .
T Consensus 204 ~~~~~~livDea~~~g~~g~~G~g~-~~~~~~~~~~~i~~~tlsKa~g~~GG~-----~~~~~~~~~~l~~--------~ 269 (406)
T PRK13393 204 EKHGAMTYLDEVHAVGLYGPRGGGI-AEREGLADRLTIIEGTLAKAFGVMGGY-----ITGSAALCDFIRS--------F 269 (406)
T ss_pred HHcCCEEEEECCccccccCCCCCch-hhhcCCCCCCeEEEEeCchhhcccCce-----eeCCHHHHHHHHH--------h
Confidence 35799999999998 88 8998765 4778876 46 469998 443 5678888877653 1
Q ss_pred ccc--hhhhcc-HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCC
Q psy7882 74 AHK--LKISDT-VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPL 145 (329)
Q Consensus 74 ~hg--~T~agn-lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~ 145 (329)
.++ .|.+.+ .+++++++. +.+++ .++..+++++|++.|+++ .++ .+++.|.|+.+.+..
T Consensus 270 ~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~---~~~~~~~i~~v~~~~-------- 336 (406)
T PRK13393 270 ASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA--GIP---HLPNPSHIVPVMVGD-------- 336 (406)
T ss_pred CcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc--CCC---cCCCCCCeEEEEeCC--------
Confidence 222 345556 667777666 65543 345567888888888764 233 346788898886632
Q ss_pred ChHHHHHHHHHHHH-CCceeeccC----C-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 146 NSRHMTHILDSCKE-HGLLLGRGG----L-SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 146 ~~~~~~~~~~~l~e-~GVLl~~~G----~-~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
......+.+.|++ +||++.+.. + ..+.+|+.|++.+ |++|+|++++++
T Consensus 337 -~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~---t~edid~l~~~l 390 (406)
T PRK13393 337 -PVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLH---TDADIEHLVQAL 390 (406)
T ss_pred -HHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCC---CHHHHHHHHHHH
Confidence 1234568888887 599997632 1 2378999999998 589999999985
No 91
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.24 E-value=1.1e-10 Score=115.11 Aligned_cols=164 Identities=13% Similarity=0.088 Sum_probs=111.6
Q ss_pred ccccceEEehhHhh-c-hhccchhhhhcccCC--cch-----HHHhhc--CCccccceeeechhHHHhhhhhhhccCCCC
Q psy7882 5 YYRDCGVVVSAVDF-G-SGDNGTYLGFQCLQI--CRF-----VQKDFK--GSFWDKLIVHTSTCTFENFIKIKYQILKTP 73 (329)
Q Consensus 5 ~~~giLLI~DEVqT-G-fGRTG~~fA~e~~GV--~PD-----i~KaLg--GG~~PigAv~~~~eI~d~~~~~~~~~~~~~ 73 (329)
..+|++||+||+++ | ||++|..+ .++.++ .|| ++|++| || .+++++++++.+.. .. .
T Consensus 205 ~~~~~~livDEa~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~~GG-----~~~~~~~~~~~l~~--~~----~ 272 (407)
T PRK09064 205 DKYNALTYLDEVHAVGMYGPRGGGI-AERDGLMDRIDIIEGTLAKAFGVMGG-----YIAGSAALVDAVRS--YA----P 272 (407)
T ss_pred HHcCCEEEEECCCcccccCCCCCCh-HHhcCCCCCCeEEEEecchhhhccCc-----eEecCHHHHHHHHH--hC----c
Confidence 35799999999998 7 58998765 567776 467 579997 54 36678888887653 11 0
Q ss_pred ccchhhhcc-HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh
Q psy7882 74 AHKLKISDT-VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS 147 (329)
Q Consensus 74 ~hg~T~agn-lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~ 147 (329)
.+..|.+.+ .+++++++. +.+++ .+++++++++|.+.|+++ .++.+. ..+.++.+.+.. .
T Consensus 273 ~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~---~~~~iv~i~~~~---------~ 338 (407)
T PRK09064 273 GFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA--GIPVMP---NESHIVPVMVGD---------P 338 (407)
T ss_pred cccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCCCCC---CCCCEEEEEeCC---------H
Confidence 112244555 677777776 66654 467888889999988875 233322 335666666532 1
Q ss_pred HHHHHHHHHHHH-CCceeeccC----C-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 148 RHMTHILDSCKE-HGLLLGRGG----L-SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 148 ~~~~~~~~~l~e-~GVLl~~~G----~-~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.....+.+.|++ +||++.+.. + ..+.+|+.|++.+ |++|++++++++
T Consensus 339 ~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~---t~edi~~l~~~l 391 (407)
T PRK09064 339 EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFH---TDEMIDHLVEAL 391 (407)
T ss_pred HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCC---CHHHHHHHHHHH
Confidence 234567888875 699997632 1 2368999999887 589999999985
No 92
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.21 E-value=2.3e-10 Score=112.84 Aligned_cols=166 Identities=13% Similarity=0.007 Sum_probs=109.0
Q ss_pred ccccceEEehhHhh-c-hhccchhhhhcccCC--cch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDF-G-SGDNGTYLGFQCLQI--CRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqT-G-fGRTG~~fA~e~~GV--~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..||++||+||+++ | +|.+|.. ..+++++ .|| ++|++++ +-|.+++++++++.+.. .. ..+
T Consensus 204 ~~~~~~livDea~~~G~~g~~g~g-~~~~~~~~~~~div~~t~sKa~g~---~GG~i~~~~~~~~~l~~--~~----~~~ 273 (402)
T TIGR01821 204 DKYGALTYLDEVHAVGLYGPRGGG-IAERDGLMHRIDIIEGTLAKAFGV---VGGYIAASRKLIDAIRS--YA----PGF 273 (402)
T ss_pred HHcCCEEEEeCcccccccCCCCCc-cchhccCCCCCeEEEEechhhhcc---CCceeecCHHHHHHHHH--hC----cCc
Confidence 35799999999999 5 3566653 3467776 467 5799972 11346788888887753 11 011
Q ss_pred chhhhcc-HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 76 KLKISDT-VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 76 g~T~agn-lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
..|.+.+ .+|+++++. +.+++ .++..+++++|.++|+++ .++.+ ...|.++.+.+.. ...
T Consensus 274 ~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~---~~~~~i~~i~~~~---------~~~ 339 (402)
T TIGR01821 274 IFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL--GIPVI---PNPSHIVPVIIGD---------AAL 339 (402)
T ss_pred eecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc--CCCcC---CCCCCEEEEEeCC---------HHH
Confidence 1244556 677777776 66543 345567788888888764 23322 2356777776532 123
Q ss_pred HHHHHHHHHH-CCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKE-HGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e-~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|++ +||++.+.. ...+.+|+.|++.. |++|||++++++
T Consensus 340 a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~---t~edi~~~~~~l 390 (402)
T TIGR01821 340 CKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAH---TDKMIDDLVEAL 390 (402)
T ss_pred HHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCC---CHHHHHHHHHHH
Confidence 4568888875 699997642 12368999999987 589999999985
No 93
>PRK07179 hypothetical protein; Provisional
Probab=99.18 E-value=2.6e-10 Score=112.68 Aligned_cols=167 Identities=16% Similarity=0.123 Sum_probs=112.2
Q ss_pred ccccceEEehhHhhc--hhccchhhhhcccCCcc--h-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFG--SGDNGTYLGFQCLQICR--F-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTG--fGRTG~~fA~e~~GV~P--D-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..+|++||+||+++. +|++|..+ ++++|+.+ | ++|++++ ++|++++++++++.+.. . ..+..|
T Consensus 208 ~~~~~~livDea~~~g~~g~~g~g~-~~~~~~~~~vdi~~~S~sK~~g~---~~G~l~~~~~~~~~~~~--~--~~~~~~ 279 (407)
T PRK07179 208 EEFGCVLVVDESHSLGTHGPQGAGL-VAELGLTSRVHFITASLAKAFAG---RAGIITCPRELAEYVPF--V--SYPAIF 279 (407)
T ss_pred HHcCCEEEEECcccccCcCCCCCch-HHhcCCCCCCCEEEeechHhhhc---cCeEEEeCHHHHHHHHH--h--CcCeee
Confidence 457999999999984 45566533 45778765 7 3699974 58999999988776642 1 112346
Q ss_pred chhhhcc-HH-HHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882 76 KLKISDT-VR-PHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 76 g~T~agn-lA-~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
++|+... ++ ..++++. +..++ .++++++.++|+++|+++ .+ ++++.|.++.+++..+ ....
T Consensus 280 ~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~--g~----~v~~~~~i~~l~~~~~---------~~~~ 344 (407)
T PRK07179 280 SSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL--GY----NIRSESQIIALETGSE---------RNTE 344 (407)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CC----CCCCCCCEEEEEeCCH---------HHHH
Confidence 6666655 32 2233332 11122 678889999999999875 22 4557788988887421 1245
Q ss_pred HHHHHHHHCCceee----ccCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDSCKEHGLLLG----RGGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~e~GVLl~----~~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.+.|.++||+.. +... ..+.+||.|+..+ |++||+++++++
T Consensus 345 ~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~---t~edi~~~~~~l 392 (407)
T PRK07179 345 VLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADL---TASDLDRVLEVC 392 (407)
T ss_pred HHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCC---CHHHHHHHHHHH
Confidence 57788999999743 2111 2479999999877 589999999985
No 94
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=98.90 E-value=2.7e-08 Score=96.86 Aligned_cols=166 Identities=10% Similarity=-0.022 Sum_probs=103.2
Q ss_pred ccccceEEehhHhh-c-hhccchhhhhcccCCcch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDF-G-SGDNGTYLGFQCLQICRF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqT-G-fGRTG~~fA~e~~GV~PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..||+++|+||++. | ++++|. ++..++++.|| ++|++++ +.|.+++++++++.+.. .. ..+ +
T Consensus 190 ~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~---~gG~~~~~~~~~~~~~~--~~--~~~-~ 260 (385)
T TIGR01825 190 ERYGAVTYVDDAHGSGVMGEAGR-GTVHHFGLEDKVDIQVGTLSKAIGV---VGGYAAGHKELIEYLKN--RA--RPF-L 260 (385)
T ss_pred HHhCCEEEEECcccccCcCCCCC-ccHhhcCCCcCCcEEEEeccHHhhc---CCCEEecCHHHHHHHHH--hC--ccc-c
Confidence 46899999999995 4 555664 34566777776 4699953 34667788888887753 11 011 1
Q ss_pred chhhhcc-HHHHHHHHh-hHHh---H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 76 KLKISDT-VRPHVQIKK-SVLE---R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 76 g~T~agn-lA~aaala~-~ile---~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
.++ ..+ ..++++.+. +.++ + .+++.++++++.++|+++ ..+.. ...+.++++.+.. ...
T Consensus 261 ~~~-~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~---~~~~~~~~~~~~~---------~~~ 325 (385)
T TIGR01825 261 FST-AQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL--GYDTG---GSETPITPVVIGD---------EKA 325 (385)
T ss_pred ccC-CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCCCC---CCCCCEEEEEECC---------HHH
Confidence 111 122 333333333 3322 2 567788888898888775 22221 1223455555421 112
Q ss_pred HHHHHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|+++||++.+.+ ...+.+|++|++.+ +++||++++++.
T Consensus 326 ~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~---~~e~i~~~~~~l 375 (385)
T TIGR01825 326 AQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEH---TKDDLDQALDAY 375 (385)
T ss_pred HHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCC---CHHHHHHHHHHH
Confidence 4568889999999885321 12378999999988 589999999985
No 95
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=98.85 E-value=5.6e-08 Score=94.06 Aligned_cols=166 Identities=12% Similarity=0.019 Sum_probs=105.7
Q ss_pred ccccceEEehhHhh-c-hhccchhhhhcccC--Ccch------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882 5 YYRDCGVVVSAVDF-G-SGDNGTYLGFQCLQ--ICRF------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 5 ~~~giLLI~DEVqT-G-fGRTG~~fA~e~~G--V~PD------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~ 74 (329)
..||+++|+||++. | ++++|..+ ....+ ..|| ++|+++. +-|.+++++++++.+.. .. ..
T Consensus 195 ~~~~~~li~De~~~~g~~~~~g~~~-~~~~~~~~~~~~i~~~s~sK~~~~---~Gg~~~~~~~~~~~~~~--~~----~~ 264 (385)
T PRK05958 195 RRHGAWLLVDEAHGTGVLGPQGRGL-AAEAGLAGEPDVILVGTLGKALGS---SGAAVLGSETLIDYLIN--RA----RP 264 (385)
T ss_pred HHhCCEEEEECcccccccCCCCCch-HHhhCCCCCCceEEEEechhhccc---CCcEEEcCHHHHHHHHH--hC----cc
Confidence 45799999999995 4 45555433 22233 3455 4699964 33777888888877642 10 11
Q ss_pred cchhhhcc-HHHHHHHHh-hHHh---H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882 75 HKLKISDT-VRPHVQIKK-SVLE---R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 75 hg~T~agn-lA~aaala~-~ile---~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~ 148 (329)
+..+.+.+ ++++++.+. +.++ + .+++.++++++.+.|+++ ..+ -+.+.|.++.+.+.. ..
T Consensus 265 ~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~---~~~~~~~~~~~~~~~---------~~ 330 (385)
T PRK05958 265 FIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRAL--GFQ---LMDSQSAIQPLIVGD---------NE 330 (385)
T ss_pred ceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCC---cCCCCCCEEEEEeCC---------HH
Confidence 22233344 555444443 3332 2 577888888888888875 122 234567788777632 12
Q ss_pred HHHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
....+.+.|.++||++.+.+. ..+.+|+.|++.+ +++|++++++++
T Consensus 331 ~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~---~~~~i~~~l~~l 381 (385)
T PRK05958 331 RALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAH---TEADIDRLLEAL 381 (385)
T ss_pred HHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCC---CHHHHHHHHHHH
Confidence 345688899999999976321 2478999999876 589999999875
No 96
>PLN02955 8-amino-7-oxononanoate synthase
Probab=98.83 E-value=3.4e-08 Score=100.49 Aligned_cols=157 Identities=9% Similarity=-0.097 Sum_probs=96.8
Q ss_pred cccccceEEehhHhhchhccch--hhhhcccCCcch-------HHHhhc--CCccccceeeechhHHHhhhhhhhccCCC
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGT--YLGFQCLQICRF-------VQKDFK--GSFWDKLIVHTSTCTFENFIKIKYQILKT 72 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~--~fA~e~~GV~PD-------i~KaLg--GG~~PigAv~~~~eI~d~~~~~~~~~~~~ 72 (329)
...||++||+||+.+ +|+.|. .+.++++|+.|| ++|++| ||| +++++++++.+..
T Consensus 275 ~~~~ga~LiVDEAH~-~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~GGf-----i~gs~~~~~~l~~-------- 340 (476)
T PLN02955 275 RKKYGFLLVIDDAHG-TFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHGGF-----IACSKKWKQLIQS-------- 340 (476)
T ss_pred HHHcCcEEEEccccc-CceecCCCCcHHHHhCCCCCCcEEEEeCccchhccCce-----eecHHHHHHHHHH--------
Confidence 345799999999997 445554 567889999988 479998 775 7888888887763
Q ss_pred Cccchhhhcc--HHHH-HHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCC
Q psy7882 73 PAHKLKISDT--VRPH-VQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVP 144 (329)
Q Consensus 73 ~~hg~T~agn--lA~a-aala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p 144 (329)
...+..|+++ .+++ ++++. +++.+ .+++.+..++|++. .+.. + ...++.|.+..
T Consensus 341 ~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~-------~G~~--~--~sPI~pI~ig~------- 402 (476)
T PLN02955 341 RGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKAL-------SGVD--I--SSPIISLVVGN------- 402 (476)
T ss_pred hCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-------cCCC--C--CCCEEEEEeCC-------
Confidence 1122233333 3443 33444 55532 23333333333331 1111 1 13455555542
Q ss_pred CChHHHHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 145 LNSRHMTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 145 ~~~~~~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+..+..+.+.|+++|+++.+..+ ....+|+. +...||++||+.+++++
T Consensus 403 --~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~---lsA~Ht~edId~lv~~L 455 (476)
T PLN02955 403 --QEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVT---LSAAHTTEDVKKLITAL 455 (476)
T ss_pred --HHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEe---eCCCCCHHHHHHHHHHH
Confidence 34566789999999999875321 12346664 34568999999999985
No 97
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=98.73 E-value=2.3e-07 Score=90.30 Aligned_cols=169 Identities=13% Similarity=0.056 Sum_probs=102.5
Q ss_pred cccccceEEehhHhh-ch-hccchhhhhcccCCc--ch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882 4 TYYRDCGVVVSAVDF-GS-GDNGTYLGFQCLQIC--RF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 4 ~~~~giLLI~DEVqT-Gf-GRTG~~fA~e~~GV~--PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~ 74 (329)
-.+||+++|.||++. |+ +++|. +....+++. +| ++|+++|+ ++|.+++++++++.+.. .. .++.
T Consensus 200 a~~~~~~li~De~~~~g~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~g~--r~G~v~~~~~~~~~l~~--~~--~~~~ 272 (397)
T PRK06939 200 ADKYDALVMVDDSHAVGFVGENGR-GTVEHFGVMDRVDIITGTLGKALGGA--SGGYTAGRKEVIDWLRQ--RS--RPYL 272 (397)
T ss_pred HHHhCCEEEEECcccccCcCCCCC-CHHHHcCCCCCCcEEEEECHHHhCcc--CceEEEeCHHHHHHHHH--hC--cccc
Confidence 346799999999994 54 34443 234556663 46 47999654 68888899999887753 10 1112
Q ss_pred cchhhhccHHHHHHHHh-hHHh---H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 75 HKLKISDTVRPHVQIKK-SVLE---R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 75 hg~T~agnlA~aaala~-~ile---~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
++++... ..++++++. +.++ + .++.+++.+++.+.|+++ +. ..+.+.|.++.+.+.. ...
T Consensus 273 ~~~~~~~-~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~~~~~~~~~~~~~---------~~~ 337 (397)
T PRK06939 273 FSNSLAP-AIVAASIKVLELLEESDELRDRLWENARYFREGMTAA----GF-TLGPGEHPIIPVMLGD---------AKL 337 (397)
T ss_pred ccCCCCH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc----CC-CcCCCCCCEEEEEECC---------HHH
Confidence 2222111 223333333 3332 2 456777777787877664 21 1123456666554421 112
Q ss_pred HHHHHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|.++||.+.+.. ...+.+|+.+++.. +++||+++++.+
T Consensus 338 ~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~---~~~~i~~~l~~L 387 (397)
T PRK06939 338 AQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAH---TKEQLDRAIDAF 387 (397)
T ss_pred HHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCC---CHHHHHHHHHHH
Confidence 4568889999999887531 12367999988776 579999999975
No 98
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=98.72 E-value=1.8e-07 Score=92.58 Aligned_cols=166 Identities=12% Similarity=-0.017 Sum_probs=101.4
Q ss_pred ccccceEEehhHhh-ch-hccchhhhhcccCC--cch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDF-GS-GDNGTYLGFQCLQI--CRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqT-Gf-GRTG~~fA~e~~GV--~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..+|+++|+||+++ |+ |+.|..+ .++.++ .+| ++|+++. +-|.+++++++++.+.. .. ...+
T Consensus 205 ~~~~~~livDea~~~g~~g~~g~g~-~~~~~~~~~~div~~tlsK~~g~---~GG~~~~~~~~~~~l~~--~~---~~~~ 275 (410)
T PRK13392 205 DRYNALTYVDEVHAVGLYGARGGGI-AERDGLMDRIDMIQGTLAKAFGC---LGGYIAASADLIDFVRS--FA---PGFI 275 (410)
T ss_pred HHcCCEEEEECCccccCcCCCCCch-hhhccCCCCCcEEEEEChHhhhc---ccchhhcCHHHHHHHHH--hC---cchh
Confidence 45799999999999 65 6776544 455665 456 5799864 22456678888876543 11 0111
Q ss_pred chhhhcc-HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 76 KLKISDT-VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 76 g~T~agn-lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
.|.+.+ .+++++.+. +.++. .+++++..++|++.|+++ ..+. +.+.+.++.+.+.. ...
T Consensus 276 -~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~---~~~~~~~~~i~~~~---------~~~ 340 (410)
T PRK13392 276 -FTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN--GIPV---MPSPSHIVPVMVGD---------PTL 340 (410)
T ss_pred -ccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCCC---CCCCCCEEEEEeCC---------HHH
Confidence 223333 445554444 44432 345667777777777664 1222 12345555554431 123
Q ss_pred HHHHHHHHH-HCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCK-EHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~-e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|+ ++||++.+... ....+|+.|++.. |++|+|.+++++
T Consensus 341 ~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~---t~edid~l~~aL 391 (410)
T PRK13392 341 CKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLH---DDEDIDALVAAL 391 (410)
T ss_pred HHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCC---CHHHHHHHHHHH
Confidence 456888886 68999986421 2368999999877 589999999986
No 99
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=98.67 E-value=5.1e-07 Score=86.32 Aligned_cols=166 Identities=10% Similarity=0.017 Sum_probs=101.9
Q ss_pred ccccceEEehhHhhchhccch--hhhhcccCCcch--------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT--YLGFQCLQICRF--------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~--~fA~e~~GV~PD--------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~ 74 (329)
..+|+++|.||+++ +|..+. ......+++.|| ++|++++ +-|.+++++++++.+.. .. ..
T Consensus 173 ~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~---~gG~~~~~~~~~~~~~~--~~----~~ 242 (360)
T TIGR00858 173 ERYGAWLMVDDAHG-TGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGS---YGAYVAGSQALIDYLIN--RA----RT 242 (360)
T ss_pred HHcCcEEEEECccc-ccCcCCCCCchHHhcCCCccCCcEEEEechhhhhc---cCcEEEcCHHHHHHHHH--hC----cc
Confidence 45799999999997 444332 123456777765 4699865 33778888888877643 00 01
Q ss_pred cchhhhcc-HHHHHHHHh-hHHh---H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882 75 HKLKISDT-VRPHVQIKK-SVLE---R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 75 hg~T~agn-lA~aaala~-~ile---~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~ 148 (329)
+..+.+.+ .+++++++. +.++ + .+++++..++|.++|+++ .... ....|.++.+.+.. ..
T Consensus 243 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~---~~~~~~~~~~~~~~---------~~ 308 (360)
T TIGR00858 243 LIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEAL--GFTL---MPSCTPIVPVIIGD---------NA 308 (360)
T ss_pred ceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc--CCcc---CCCCCCEEEEEeCC---------HH
Confidence 11112223 334333333 3322 2 567888888888888764 1211 12346677777632 11
Q ss_pred HHHHHHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
-...+.+.|.++||++.+.. ..++.+|+.|+... +++|++++++++
T Consensus 309 ~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~---~~~~i~~~l~~l 359 (360)
T TIGR00858 309 SALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAH---TPGDIDRLAEAL 359 (360)
T ss_pred HHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCC---CHHHHHHHHHhh
Confidence 24568889999999997521 12468999999876 579999999864
No 100
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=98.65 E-value=3.2e-07 Score=89.33 Aligned_cols=158 Identities=11% Similarity=0.007 Sum_probs=93.8
Q ss_pred cceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
++++|.||+.++|++.|...+.+..+..|+ ++|+++ .| +++|.+++++++++.+.. .. .+|.
T Consensus 190 ~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~G-lRiG~~~~~~~~~~~l~~--~~--------~~~~ 258 (368)
T PRK03317 190 PGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAG-GRLGYLAAAPAVVDALRL--VR--------LPYH 258 (368)
T ss_pred CceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccch-hhhhhhhCCHHHHHHHHh--cC--------CCCC
Confidence 689999999999987775555555565677 579997 68 599999999999988763 11 1233
Q ss_pred cc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEE-EeecCCCCCCCCChHHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGV-DLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 81 gn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gI-ef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
.+ ++++++.+. +..+. .++++++.+. ++.+.+...+++. .-....|.++-+ .+. ....+.+.
T Consensus 259 ~s~~~~~a~~~~l~~~~~~~~~~~~~~~~-~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~------------~~~~~~~~ 324 (368)
T PRK03317 259 LSAVTQAAARAALRHADELLASVAALRAE-RDRVVAWLRELGL-RVAPSDANFVLFGRFA------------DRHAVWQG 324 (368)
T ss_pred CCHHHHHHHHHHhhCHHHHHHHHHHHHHH-HHHHHHHHHHCCC-EeCCCCCcEEEEeccC------------CHHHHHHH
Confidence 33 444333332 21111 2233333222 2223333333432 112233333222 110 13458888
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|.++||++.+.+ ..+.+|+.- ++.++++.+++++
T Consensus 325 l~~~Gv~v~~~~-~~~~iRi~~------~~~~~~~~~~~~l 358 (368)
T PRK03317 325 LLDRGVLIRDVG-IPGWLRVTI------GTPEENDAFLAAL 358 (368)
T ss_pred HHHCCEEEEeCC-CCCeEEEec------CCHHHHHHHHHHH
Confidence 999999998765 357888862 1568899998875
No 101
>PLN02483 serine palmitoyltransferase
Probab=98.64 E-value=6e-07 Score=91.81 Aligned_cols=165 Identities=12% Similarity=0.082 Sum_probs=102.3
Q ss_pred ccccceEEehhHhh--chhccchhhhhcccCCcc---h-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882 5 YYRDCGVVVSAVDF--GSGDNGTYLGFQCLQICR---F-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 5 ~~~giLLI~DEVqT--GfGRTG~~fA~e~~GV~P---D-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~ 74 (329)
.++|+++|+||+++ .+|++|.. ..+++++.| | ++|+++. +-|.+++++++.+.+.. ..
T Consensus 267 ~~~~~~livDEa~s~g~~G~~G~g-~~~~~~v~~~~~dI~~~SfSKs~g~---~GG~i~~~~~li~~l~~--------~~ 334 (489)
T PLN02483 267 KKYKAYVYLDEAHSIGAVGKTGRG-VCELLGVDPADVDIMMGTFTKSFGS---CGGYIAGSKELIQYLKR--------TC 334 (489)
T ss_pred HHcCCEEEEECcCccCccCCCCCc-hHHhcCCCcccCcEEEEecchhccc---CceEEEcCHHHHHHHHH--------hC
Confidence 45799999999996 25667754 567889876 3 4699863 22557788999887763 22
Q ss_pred cchhhhc--c-HHHHHHHHh-hHHh---------H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCC
Q psy7882 75 HKLKISD--T-VRPHVQIKK-SVLE---------R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKE 140 (329)
Q Consensus 75 hg~T~ag--n-lA~aaala~-~ile---------~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~ 140 (329)
++.+|++ + .+++++++. +++. + .++.++..++|+++|+++ ..+.... ..+.++++.+..
T Consensus 335 ~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~--G~~v~~~--~~sp~~~l~l~~--- 407 (489)
T PLN02483 335 PAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM--GFEVLGD--NDSPVMPIMLYN--- 407 (489)
T ss_pred ccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC--CCcccCC--CCCCEEEEEECC---
Confidence 3333332 2 333333333 3221 1 456667777777777764 1211111 123555665532
Q ss_pred CCCCCChHHHHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 141 TKVPLNSRHMTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 141 ~~~p~~~~~~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
......+.+.|+++||.+.+.+. ....+||+.+... +++||+++++++
T Consensus 408 ------~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~---t~edId~~l~~L 460 (489)
T PLN02483 408 ------PAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASH---SREDLIKALEVI 460 (489)
T ss_pred ------HHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCC---CHHHHHHHHHHH
Confidence 12345688899999999986432 1257888776654 689999999985
No 102
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=98.62 E-value=7e-07 Score=87.29 Aligned_cols=168 Identities=12% Similarity=0.038 Sum_probs=100.5
Q ss_pred ccccceEEehhHh-hch-hccchhhhhcccCCc--ch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVD-FGS-GDNGTYLGFQCLQIC--RF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVq-TGf-GRTG~~fA~e~~GV~--PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..||++||.||++ .|+ |..|. +..+..++. +| ++|+++|+ ..|.+.+++++++.+.. .. .++..
T Consensus 197 ~~~~~~li~De~~~~g~~~~~~~-~~~~~~~~~~~~di~~~s~sK~l~g~--r~G~~~~~~~~~~~l~~--~~--~~~~~ 269 (393)
T TIGR01822 197 DKYDALVMVDECHATGFLGPTGR-GSHELCGVMGRVDIITGTLGKALGGA--SGGFTTARKEVVELLRQ--RS--RPYLF 269 (393)
T ss_pred HHcCCEEEEECCccccCcCCCCC-chHHhcCCCCCCeEEEEEChHHhhCC--CcEEEEeCHHHHHHHHH--hC--cccee
Confidence 4689999999998 343 33433 233455654 45 46999763 68888999999887653 00 11112
Q ss_pred chhhhccHHHHHHHHh-hHH---hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHH
Q psy7882 76 KLKISDTVRPHVQIKK-SVL---ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHM 150 (329)
Q Consensus 76 g~T~agnlA~aaala~-~il---e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~ 150 (329)
++|... ..++++++. +.+ ++ .++++++.+++.++|+++ ..... .+.+.+..+.+.. ....
T Consensus 270 ~~~~~~-~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~---~~~~~~~~i~~~~---------~~~~ 334 (393)
T TIGR01822 270 SNSLPP-AVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA--GFDIK---PADHPIIPVMLYD---------AVLA 334 (393)
T ss_pred cCCCCH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCCCC---CCCCCEEEEEeCC---------HHHH
Confidence 222111 222233333 333 22 567788888888888763 22211 1234555555432 1234
Q ss_pred HHHHHHHHHCCceeeccC----C-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGG----L-SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G----~-~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+.+.|.++||++.... . ....+|+.+.+.. +++||+++++++
T Consensus 335 ~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~---t~edi~~~~~~l 383 (393)
T TIGR01822 335 QRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAH---TEEQLDRAVEAF 383 (393)
T ss_pred HHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCC---CHHHHHHHHHHH
Confidence 568888999999886321 1 2246899888765 689999999985
No 103
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=98.60 E-value=5.7e-07 Score=84.83 Aligned_cols=166 Identities=11% Similarity=0.010 Sum_probs=100.3
Q ss_pred ccccceEEehhHhhchhccchhhh----hcccCCcch---HHHhhc-CCccccceeeech-hHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLG----FQCLQICRF---VQKDFK-GSFWDKLIVHTST-CTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA----~e~~GV~PD---i~KaLg-GG~~PigAv~~~~-eI~d~~~~~~~~~~~~~~h 75 (329)
..+|+++|+||+++++...|.... ....+.... ++|.++ +| .++|++++++ ++.+.+.. . ..
T Consensus 162 ~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g-~~~G~i~~~~~~~~~~~~~--~------~~ 232 (350)
T cd00609 162 KKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPG-LRIGYLIAPPEELLERLKK--L------LP 232 (350)
T ss_pred HhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcc-cceEEEecCHHHHHHHHHH--H------HH
Confidence 467999999999999877665431 111121111 569998 77 4899999999 78887764 1 11
Q ss_pred chhhhcc-H---HHHHHHHhh--HHhH-HHHHHHHHHHHHHHHHHHHHhCCcee-eEEeeceeeEEEeecCCCCCCCCCh
Q psy7882 76 KLKISDT-V---RPHVQIKKS--VLER-FVHTYVVGNFLLTHLSKLREEFAIVG-DVRGKGLMIGVDLVQDKETKVPLNS 147 (329)
Q Consensus 76 g~T~agn-l---A~aaala~~--ile~-le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~GLm~gIef~~d~~~~~p~~~ 147 (329)
..++..+ . +...+++.. .+++ .+++.+..+++.+.|++. +... .....|.+..+.+...
T Consensus 233 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~g~~~~~~~~~~--------- 299 (350)
T cd00609 233 YTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKEL----GPLVVVKPSGGFFLWLDLPEG--------- 299 (350)
T ss_pred hcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCccEEEEEecCCC---------
Confidence 1223333 2 222333331 1222 344555556666655543 3221 3445577777776431
Q ss_pred HHHHHHHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 148 RHMTHILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 148 ~~~~~~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.....+.+.+.++|+.+.+++. .++.+|+.|... ++|++.+++++
T Consensus 300 ~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~-----~~~i~~~~~al 348 (350)
T cd00609 300 DDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-----EEELEEALERL 348 (350)
T ss_pred ChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC-----HHHHHHHHHHh
Confidence 1234466777788999987531 367999998866 58999999875
No 104
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=98.39 E-value=2.3e-06 Score=83.65 Aligned_cols=170 Identities=10% Similarity=-0.074 Sum_probs=95.1
Q ss_pred ccccceEEehhHhhc---hhccchhhhhcccCCcch-----HHHhh---cCCcccc-ceeeechhHHHhhhhhhhccC--
Q psy7882 5 YYRDCGVVVSAVDFG---SGDNGTYLGFQCLQICRF-----VQKDF---KGSFWDK-LIVHTSTCTFENFIKIKYQIL-- 70 (329)
Q Consensus 5 ~~~giLLI~DEVqTG---fGRTG~~fA~e~~GV~PD-----i~KaL---gGG~~Pi-gAv~~~~eI~d~~~~~~~~~~-- 70 (329)
..||+++|+|+++++ ++++|. + .+| ..|.+ ++|. |. |.+.+++++.+.+.....+..
T Consensus 186 ~~~g~~livD~~~~~~~~~~~~~~------~--~~d~~~~s~~K~~~p~g~Gg-p~~g~l~~~~~~~~~~~~~~~~~~~~ 256 (398)
T cd00613 186 HSAGALVYVDGDNLNLTGLKPPGE------Y--GADIVVGNLQKTGVPHGGGG-PGAGFFAVKKELVRFLPGRLVGVTKD 256 (398)
T ss_pred HhcCCEEEEEeccccccCCCChHH------c--CCCEEEeeccccCCCCCCCC-CceeEEEEhhhhHhhCCCCeeccccc
Confidence 467999999998753 333332 2 366 34654 4453 65 555566666665321000000
Q ss_pred -----------C--------CCccchhhhcc-HHHHHHHHh-hHH-----hH-HHHHHHHHHHHHHHHHHHHHhCCceee
Q psy7882 71 -----------K--------TPAHKLKISDT-VRPHVQIKK-SVL-----ER-FVHTYVVGNFLLTHLSKLREEFAIVGD 123 (329)
Q Consensus 71 -----------~--------~~~hg~T~agn-lA~aaala~-~il-----e~-le~v~~lG~~L~~gL~eL~~~~p~v~~ 123 (329)
. -..++.+++++ +.++++... ..+ ++ .++..+++++|+++|+++.... ....
T Consensus 257 ~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~ 335 (398)
T cd00613 257 AEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVL-PFNG 335 (398)
T ss_pred cCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCCC
Confidence 0 01234566666 555444433 222 22 5678889999999888753211 1111
Q ss_pred EEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccC-CCCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882 124 VRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG-LSGNTLTALQPKLLNYWTDFVGTPCLDC 196 (329)
Q Consensus 124 VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G-~~~nvIrl~PPL~It~~t~eeId~~l~~ 196 (329)
.+.. ...+.+... .......+.+.|.++|+++.... ...+++|+.|++.. |++|||+++++
T Consensus 336 ~~~~--~v~~~~~~~-------~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~~~---t~edid~~~~~ 397 (398)
T cd00613 336 PFFH--EFVLRLPPL-------YGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETE---TKEELDALLEA 397 (398)
T ss_pred CeeE--EEEEEcCCc-------chHHHHHHHHhhhhcCccccccccCCCCeEEEEcCCCC---CHHHHHHHHHh
Confidence 2221 123333210 01234568888999999875421 13579999999988 58999999976
No 105
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=98.36 E-value=5.2e-06 Score=81.29 Aligned_cols=158 Identities=11% Similarity=0.037 Sum_probs=88.4
Q ss_pred cccceEEehhHhh-c-hhccchhhhhcccCC---cch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882 6 YRDCGVVVSAVDF-G-SGDNGTYLGFQCLQI---CRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 6 ~~giLLI~DEVqT-G-fGRTG~~fA~e~~GV---~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
.+|++||+||+|+ | +|++|..++ ..++. .+| ++|++|+. -+++++.+++.+.+.. .. .+...
T Consensus 171 ~~~~~livDea~~~G~~g~~g~g~~-~~~~~~~~~~~~~tlsK~~g~~---G~~vl~~~~~~~~~~~--~~--~~~~~-- 240 (370)
T PRK05937 171 KYHAHLIVDEAHAMGIFGDDGKGFC-HSLGYENFYAVLVTYSKALGSM---GAALLSSSEVKQDLML--NS--PPLRY-- 240 (370)
T ss_pred HcCCEEEEECCccccccCCCCCchH-HhhCCCCCcEEEEechhhhhcC---ceEEEcCHHHHHHHHH--hC--CCCee--
Confidence 5699999999998 5 777775432 23343 256 67998652 1445666776655442 00 11221
Q ss_pred hhhcc-HHHHHHHHh-hHHhH-----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHH
Q psy7882 78 KISDT-VRPHVQIKK-SVLER-----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHM 150 (329)
Q Consensus 78 T~agn-lA~aaala~-~ile~-----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~ 150 (329)
+.+.+ .++++..+. +.+++ .++++++.++|.+.|.. ++.|....+.+.. ...
T Consensus 241 s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~-----------~~~~~~~~i~~~~----------~~~ 299 (370)
T PRK05937 241 STGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSS-----------AAPGCVQPIFLPG----------ISE 299 (370)
T ss_pred cCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC-----------CCCCCEEEEEeCC----------hhH
Confidence 22233 333333233 44432 23344444444443321 1223333444421 113
Q ss_pred HHHHHHHHHCCceeecc-CCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRG-GLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~-G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+.+.|.++||++... .+....+|+.+.... |++|||++++++
T Consensus 300 ~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~---t~edid~l~~~L 344 (370)
T PRK05937 300 QELYSKLVETGIRVGVVCFPTGPFLRVNLHAFN---TEDEVDILVSVL 344 (370)
T ss_pred HHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCC---CHHHHHHHHHHH
Confidence 46788889999988742 223468999998776 689999999985
No 106
>PRK06225 aspartate aminotransferase; Provisional
Probab=98.35 E-value=1.1e-05 Score=78.84 Aligned_cols=166 Identities=8% Similarity=-0.017 Sum_probs=97.0
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
..+|+++|.||++.+|.. +.... ..+.|| ++|.++ .| +.+|++++++++++.+.. . +.
T Consensus 187 ~~~~~~ii~De~y~~~~~-~~~~~---~~~~~~~~i~~~s~SK~~g~~G-~RiG~i~~~~~l~~~~~~--~-------~~ 252 (380)
T PRK06225 187 RDNDAFLLHDCTYRDFAR-EHTLA---AEYAPEHTVTSYSFSKIFGMAG-LRIGAVVATPDLIEVVKS--I-------VI 252 (380)
T ss_pred HHCCcEEEEehhHHHHhc-cCCch---hhcCCCCEEEEeechhhcCCcc-ceeEEEecCHHHHHHHHH--H-------Hh
Confidence 357999999999987732 22111 123444 579997 67 589999999999887653 1 11
Q ss_pred hhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCc--eeeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882 77 LKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAI--VGDVRGKGLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 77 ~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~--v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
++++.+ ++++++.+. +..++ ++++++.-+..++.+.+..++++. +......|.++.++|.... .+ ..
T Consensus 253 ~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~---~~ 324 (380)
T PRK06225 253 NDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAG-----ID---PE 324 (380)
T ss_pred cccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccccc-----CC---HH
Confidence 234445 444433322 11111 344544444444444444444332 2223445778888874311 11 34
Q ss_pred HHHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+...|.++||.+.+.. ...+.+|+. +.. +++|++++++++
T Consensus 325 ~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s--~~~---~~e~l~~~~~~l 370 (380)
T PRK06225 325 DLVEYLLERKIFVRQGTYTSKRFGDRYIRVS--FSI---PREQVEVFCEEF 370 (380)
T ss_pred HHHHHHHHCCEEEcCCcccCcCCCCceEEEE--eCC---CHHHHHHHHHHH
Confidence 57788889999988731 123577875 332 589999999975
No 107
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=98.31 E-value=8.4e-06 Score=81.32 Aligned_cols=166 Identities=13% Similarity=0.015 Sum_probs=102.1
Q ss_pred ccccccceEEehhHhhchhccc--hhhhhcccCCcch--------HHHhhcCCccccceeeechhHHHhhhhhhhccCCC
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNG--TYLGFQCLQICRF--------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKT 72 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG--~~fA~e~~GV~PD--------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~ 72 (329)
+-.+|++.|++||... +|-.| ..+..+++|+.|+ ++|++|+- =|.+.+++.+.|.+..
T Consensus 196 L~~ky~a~L~VDEAHa-~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~---Gg~v~g~~~~~d~L~~-------- 263 (388)
T COG0156 196 LAEKYGALLYVDEAHA-VGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSS---GGYIAGSAALIDYLRN-------- 263 (388)
T ss_pred HHHHhCcEEEEEcccc-ccccCCCCccHHHHhCCCCccceEEEEEchhhhccc---CceeeCcHHHHHHHHH--------
Confidence 4457889999999986 44444 2346788899876 57999843 2567778877776653
Q ss_pred Cccchhhhcc---HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCC
Q psy7882 73 PAHKLKISDT---VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVP 144 (329)
Q Consensus 73 ~~hg~T~agn---lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p 144 (329)
...+.-|+.+ ..+++++++ +++++ .++++++..+++..+... +... ....-.++-+.+.+
T Consensus 264 ~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~----~~~~-~~s~s~I~pv~~gd------- 331 (388)
T COG0156 264 RARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL----GLVL-LPSESPIIPVILGD------- 331 (388)
T ss_pred hCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc----CCcc-CCCCCCeeeeEeCC-------
Confidence 2333444444 333444555 66654 456666666666433322 1110 11112233344432
Q ss_pred CChHHHHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 145 LNSRHMTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 145 ~~~~~~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+..+..+...|+++||++.+-.+ ....+|+.|.. .||++||+.+++++
T Consensus 332 --~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta---~ht~~~I~~l~~~l 384 (388)
T COG0156 332 --EERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTA---AHTEEDIDRLAEAL 384 (388)
T ss_pred --HHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecC---CCCHHHHHHHHHHH
Confidence 35577788899999999976321 23568887754 45799999999875
No 108
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=98.25 E-value=1.3e-05 Score=77.52 Aligned_cols=170 Identities=12% Similarity=-0.033 Sum_probs=94.7
Q ss_pred ccccceEEehhHhhchh----ccchhhhhcccCCcch-H----HHhhcCCccccceeeech-hHHHhhhhhh-hc-cCCC
Q psy7882 5 YYRDCGVVVSAVDFGSG----DNGTYLGFQCLQICRF-V----QKDFKGSFWDKLIVHTST-CTFENFIKIK-YQ-ILKT 72 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfG----RTG~~fA~e~~GV~PD-i----~KaLgGG~~PigAv~~~~-eI~d~~~~~~-~~-~~~~ 72 (329)
..+|+++|+||+|+|+. +.+..+.....+ .| + -|.+.+| .|+|+++++. ++.+.+.... +. ....
T Consensus 178 ~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~--vd~~~~s~~K~~~a~-~~~G~~~~~~~~~~~~l~~~~~~~~~~~~ 254 (371)
T PRK13520 178 LENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPG--VDSITIDPHKMGLAP-IPAGGILFRDESYLDALAVDTPYLTSKKQ 254 (371)
T ss_pred HHcCCCEEEEecchhHHHHhhcCCCCccccCCC--CceEEECCccccCcc-CCceEEEEcCHHHHHhhcccCccccCCCC
Confidence 45799999999998763 111112222223 24 2 2654445 4898777644 4665543100 00 0001
Q ss_pred Cccchhhhcc--HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC
Q psy7882 73 PAHKLKISDT--VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN 146 (329)
Q Consensus 73 ~~hg~T~agn--lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~ 146 (329)
..+++|.++. .+..++++. +-+++ .++..++.++|.+.|+++ ....+ +.....++.+.+..
T Consensus 255 ~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~--~~~~~~~v~~~~~~--------- 321 (371)
T PRK13520 255 ATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER--GFEPV--IEPVLNIVAFDDPN--------- 321 (371)
T ss_pred cceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC--CCEEe--cCCCceEEEEecCC---------
Confidence 1233455444 333333332 11222 667788888888888764 22211 11123355555421
Q ss_pred hHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|.++|+++..++ .++++|+.++... |++||+.+++++
T Consensus 322 ---~~~v~~~L~~~gi~v~~~~-~~~~iRis~~~~~---t~edi~~~~~~l 365 (371)
T PRK13520 322 ---PDEVREKLRERGWRVSVTR-CPEALRIVCMPHV---TREHIENFLEDL 365 (371)
T ss_pred ---HHHHHHHHHHCCceeccCC-CCCEEEEEEECCC---CHHHHHHHHHHH
Confidence 3468888999999998764 3678999654433 689999999985
No 109
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=98.10 E-value=6.7e-05 Score=73.49 Aligned_cols=160 Identities=8% Similarity=0.021 Sum_probs=98.0
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+++++|.||+...|+..|...... ...|+ ++|.++ .| +.+|.+++++++++.+.. .. .++
T Consensus 186 ~~~~lI~DE~y~~~~~~~~~~~~~--~~~~~~i~~~SfSK~~g~~G-lRiG~~v~~~~~~~~l~~--~~--------~~~ 252 (369)
T PRK08153 186 ETTLLVLDEAYCETAPAGAAPPID--TDDPNVIRMRTFSKAYGLAG-ARVGYAIGAPGTIKAFDK--VR--------NHF 252 (369)
T ss_pred CCcEEEEeCchhhhcCcccchhhh--hcCCCEEEEecchHhccCcc-hheeeeecCHHHHHHHHH--hh--------cCC
Confidence 489999999999886544322111 12233 679998 78 499999999999987763 11 123
Q ss_pred hcc-HHHHH---HHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 80 SDT-VRPHV---QIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 80 agn-lA~aa---ala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
+.+ ++.++ +++. +. +++.++..+..++.+.+..++++.. .+-..|.++-+.+..+ ...+..+.
T Consensus 253 ~~s~~~q~~~~~~l~~~~~---~~~~~~~~~~~r~~~~~~L~~~g~~-~~p~~~~f~~~~~~~~--------~~~a~~l~ 320 (369)
T PRK08153 253 GMNRIAQAAALAALKDQAY---LAEVVGKIAAARDRIAAIARANGLT-PLPSATNFVAIDCGRD--------GAFARAVL 320 (369)
T ss_pred CCCHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHHHHHHHCCCc-cCCCcCcEEEEECCCC--------cccHHHHH
Confidence 334 33333 2322 22 4456666666666666655555531 2233455555554311 12456788
Q ss_pred HHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
++|.++||+++..+. ..+.+|+.- . +++|++.+++++
T Consensus 321 ~~l~~~Gi~v~~p~~~~~~~~iRis~----~--~~~~~~~~~~al 359 (369)
T PRK08153 321 DGLIARDIFVRMPGVAPLDRCIRVSC----G--PDEELDLFAEAL 359 (369)
T ss_pred HHHHHCCeEEeeCCCCCCCCeEEEec----C--CHHHHHHHHHHH
Confidence 999999999964331 235677652 2 589999999985
No 110
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=98.08 E-value=8e-05 Score=72.26 Aligned_cols=161 Identities=11% Similarity=0.038 Sum_probs=93.9
Q ss_pred ccceEEehhHhhchhccch-hhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 7 RDCGVVVSAVDFGSGDNGT-YLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~-~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
+++++|.||+...+...+. ..+....+..++ ++|.++ .| +.+|.+++++++.+.+.. .. .+
T Consensus 185 ~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~l~~~~~~~~~l~~--~~--------~~ 253 (367)
T PRK02731 185 PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAG-LRVGYGIAPPEIIDALNR--VR--------QP 253 (367)
T ss_pred CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcc-cceeeeeCCHHHHHHHHH--cc--------CC
Confidence 4899999999887754332 122222333344 579986 67 499999999998887763 11 11
Q ss_pred hhcc-HHH---HHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882 79 ISDT-VRP---HVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI 153 (329)
Q Consensus 79 ~agn-lA~---aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~ 153 (329)
+..+ ++. .++++. +.+ +++.+.-...++.+.+..++++.. .....|.++.+.+.... -...+
T Consensus 254 ~~~~~~~~~~a~~~l~~~~~~---~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~g~~~~i~~~~~~---------~~~~~ 320 (367)
T PRK02731 254 FNVNSLALAAAVAALDDDAFV---EKSRALNAEGMAWLTEFLAELGLE-YIPSVGNFILVDFDDGK---------DAAEA 320 (367)
T ss_pred CCCCHHHHHHHHHHhCCHHHH---HHHHHHHHHHHHHHHHHHHHCCCc-cCCCCceEEEEECCCCC---------CHHHH
Confidence 2223 332 233333 333 333333333344444444444432 12345778888773211 13457
Q ss_pred HHHHHHCCceeeccCCC--CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLS--GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~--~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.|.++||++.+.... .+.+|+... +.+|++.+++++
T Consensus 321 ~~~L~~~gI~v~~~~~~~~~~~iRis~~------~~~e~~~l~~aL 360 (367)
T PRK02731 321 YQALLKRGVIVRPVAGYGLPNALRITIG------TEEENRRFLAAL 360 (367)
T ss_pred HHHHHHCCEEEEeCCCCCCCCeEEEecC------CHHHHHHHHHHH
Confidence 88888999999885422 367888752 578999999875
No 111
>KOG1359|consensus
Probab=98.05 E-value=4.1e-05 Score=73.51 Aligned_cols=169 Identities=8% Similarity=-0.012 Sum_probs=99.6
Q ss_pred cccccceEEehhHh-hch-hccchhhhhcccCCcch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882 4 TYYRDCGVVVSAVD-FGS-GDNGTYLGFQCLQICRF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 4 ~~~~giLLI~DEVq-TGf-GRTG~~fA~e~~GV~PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~ 74 (329)
..++|+|+.+||-. ||| |-||. +.-|.+||.-| ++|++||- -=|-+.++.++.+.+.. ..+++.
T Consensus 219 a~kYgaLlfiDecHaTgf~G~tGr-Gt~E~~~vm~~vdiinsTLgKAlGga--~GGyttgp~~li~llrq----r~Rpyl 291 (417)
T KOG1359|consen 219 AKKYGALLFIDECHATGFFGETGR-GTAEEFGVMGDVDIINSTLGKALGGA--SGGYTTGPKPLISLLRQ----RSRPYL 291 (417)
T ss_pred HHhcCcEEEEeecccceeecCCCC-ChHHHhCCCCcceehhhhhhhhhcCC--CCCCccCChhHHHHHHh----cCCcee
Confidence 34689999999985 554 55665 45688897554 68999842 12335677777766653 223455
Q ss_pred cchhhhcc-HHHHHHHHhhHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHH
Q psy7882 75 HKLKISDT-VRPHVQIKKSVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 75 hg~T~agn-lA~aaala~~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~ 149 (329)
.+.+..-+ ++|++..-.-++.. +.+.+..-+++++.++.- + ..|.|. -.++-+-+. +...
T Consensus 292 FSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~a----G--ftIsg~~hPI~pv~lG---------da~l 356 (417)
T KOG1359|consen 292 FSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAA----G--FTISGASHPICPVMLG---------DARL 356 (417)
T ss_pred ecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc----C--ceecCCCCCccceecc---------cHHH
Confidence 55555544 55544321111211 455666677777665532 1 112221 122333332 2467
Q ss_pred HHHHHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.++.++|+++|+++..-. ++...||+. ++..||++|||++++++
T Consensus 357 A~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVq---iSAaHt~edid~~i~Af 406 (417)
T KOG1359|consen 357 ASKMADELLKRGIYVIGFSYPVVPKGKARIRVQ---ISAAHTEEDIDRLIEAF 406 (417)
T ss_pred HHHHHHHHHhcCceEEeecCCcCCCCceEEEEE---EehhcCHHHHHHHHHHH
Confidence 8889999999999986321 123344442 45678999999999985
No 112
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=98.03 E-value=0.00012 Score=69.86 Aligned_cols=167 Identities=13% Similarity=0.014 Sum_probs=92.8
Q ss_pred ccccceEEehhHhhchhccchhh-hhcccCC---cch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQI---CRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~GV---~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..+|+++|+||++. +|..+..+ +...+.+ .+| ++|.++. +.|.+++++++++.+... . ..+..
T Consensus 159 ~~~~~~livD~a~~-~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~---~gG~i~~~~~~~~~~~~~--~--~~~~~ 230 (349)
T cd06454 159 KKYGAILFVDEAHS-VGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA---VGGYIAGSKELIDYLRSY--A--RGFIF 230 (349)
T ss_pred HHcCCEEEEEcccc-ccccCCCCCChhhhccccccCcEEEeechhhhcc---cCCEEECCHHHHHHHHHh--c--hhhhc
Confidence 35799999999985 33332111 1112222 234 4598864 446677888888776531 0 01111
Q ss_pred chhhhcc-HHHHHHHHh-hHH---hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 76 KLKISDT-VRPHVQIKK-SVL---ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 76 g~T~agn-lA~aaala~-~il---e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
+.+.+ ..++++.+. +.+ ++ .+++.++.+++.+.|+++ ..+.+.. +.+.+..+ +..+ ...
T Consensus 231 --~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--g~~~~~~--~~~~~~~~-~~~~--------~~~ 295 (349)
T cd06454 231 --STSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL--GFPVGGS--PSHIIPPL-IGDD--------PAK 295 (349)
T ss_pred --cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc--CCcccCC--CCCcEEEE-eCCC--------hHH
Confidence 11223 333333333 322 22 567777888888877664 2222111 11222222 2111 122
Q ss_pred HHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..++.+.|.++||.+.+.+. .++.+|+.|+... +++|++++++++
T Consensus 296 ~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l 345 (349)
T cd06454 296 AVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAH---TKEDIDRLLEAL 345 (349)
T ss_pred HHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCC---CHHHHHHHHHHH
Confidence 45688889999999876321 2478999998766 579999999875
No 113
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=98.02 E-value=0.00011 Score=70.60 Aligned_cols=157 Identities=12% Similarity=0.055 Sum_probs=92.0
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+++++|+||++.++...+.... ...-.|+ ++|.++ .| +.+|.+++++++.+.+.. .. .++
T Consensus 173 ~~~~ii~D~~y~~~~~~~~~~~--~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~--~~--------~~~ 239 (346)
T TIGR01141 173 EDALVVVDEAYGEFSGEPSTLP--LLAEYPNLIVLRTLSKAFGLAG-LRIGYAIANAEIIDALNK--VR--------APF 239 (346)
T ss_pred CCcEEEEECchhhhcCCccHHH--HHhhCCCEEEEehhhHhhhchh-hhceeeecCHHHHHHHHh--cc--------CCC
Confidence 5899999999997754322211 1111234 579995 56 489999999998887653 11 112
Q ss_pred hcc-HHHH---HHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882 80 SDT-VRPH---VQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI 153 (329)
Q Consensus 80 agn-lA~a---aala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~ 153 (329)
+.+ .++. +++.. +.+++ .+++++.-+++.+.|++ ++.+.-+...|.++.+++.. -..++
T Consensus 240 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~g~~~~~~~~~-----------~~~~~ 304 (346)
T TIGR01141 240 NLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKK----LPGLEVYPSDANFVLIRFPR-----------DADAL 304 (346)
T ss_pred CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCEECCCcCCEEEEecCC-----------CHHHH
Confidence 223 3332 23333 32332 34445555555555543 33222222346777777642 13457
Q ss_pred HHHHHHCCceeeccCCC---CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLS---GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~---~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...|.++||++.+.... .+.+|+... +++|++++++++
T Consensus 305 ~~~L~~~gI~v~~g~~f~~~~~~iRls~~------~~~~i~~~~~~l 345 (346)
T TIGR01141 305 FEALLEKGIIVRDLNSYPGLPNCLRITVG------TREENDRFLAAL 345 (346)
T ss_pred HHHHHHCCeEEEeCCCcCCCCCeEEEecC------CHHHHHHHHHHh
Confidence 88889999999875321 578888743 578999998763
No 114
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=97.96 E-value=8.5e-05 Score=70.72 Aligned_cols=164 Identities=10% Similarity=-0.005 Sum_probs=90.3
Q ss_pred ccccceEEehhHhhchh--ccchhhhhcccCCcch-----HHHhhcCCcccccee-eechhHHHhhhhhhhccCCCCccc
Q psy7882 5 YYRDCGVVVSAVDFGSG--DNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIV-HTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfG--RTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv-~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
.++|+++|+||.+.-+. -.|. ....+...+| +.|.++. |.|++ ++++++.+.+.. .. ..++
T Consensus 156 ~~~~~~livDea~~~~~~~~~~~--~~~~~~~~~d~~~~s~sK~~~~---~~g~~~~~~~~~~~~~~~--~~----~~~~ 224 (338)
T cd06502 156 KENGLPLHLDGARLANAAAALGV--ALKTYKSGVDSVSFCLSKGGGA---PVGAVVVGNRDFIARARR--RR----KQAG 224 (338)
T ss_pred HHcCCeEeechHHHHHHHHhcCC--CHHHHHhcCCEEEEeccccCCC---ccceEEECCHHHHHHHHH--HH----HHhC
Confidence 35789999999763111 1121 1112223456 4588752 55554 568888877653 10 1123
Q ss_pred hhhhcc-HHHHHHHHh----hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882 77 LKISDT-VRPHVQIKK----SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 77 ~T~agn-lA~aaala~----~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
.+++.+ ++++++++. ...+..++..++.+++.+.|+++ +.. -....+-+..+.+... .....
T Consensus 225 ~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~-~~~~~~~~~~v~~~~~--------~~~~~ 291 (338)
T cd06502 225 GGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL----GGL-ESEVQTNIVLLDPVEA--------NAVFV 291 (338)
T ss_pred CChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----CCC-cccccCCeEEEecCCc--------cHHHH
Confidence 344433 443444332 12222567777778888888764 221 0011222333333210 12333
Q ss_pred HHHHHHH---HCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDSCK---EHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~---e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+...+. ++|+++.+.+ .+.+|+.|++.+ +++|+++++++.
T Consensus 292 ~l~~~l~~~~~~gi~~~~~~--~~~lRi~~~~~~---~~~~i~~~~~~l 335 (338)
T cd06502 292 ELSKEAIERRGEGVLFYAWG--EGGVRFVTHWDT---TEEDVDELLSAL 335 (338)
T ss_pred HHHHHHHHhhhCCEEEEecC--CCeEEEEeecCC---CHHHHHHHHHHH
Confidence 4444443 7899998764 389999999988 579999999874
No 115
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=97.92 E-value=0.00018 Score=71.29 Aligned_cols=172 Identities=6% Similarity=-0.053 Sum_probs=89.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhc---cCC--CCccc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQ---ILK--TPAHK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~---~~~--~~~hg 76 (329)
..+|+++|+|++|+. |.. -+..+.+|+... ..|.|.||. . +++..+++..+.+.+...+ ... .+.+.
T Consensus 198 ~~~g~~~~vD~aq~~-G~~--~id~~~~gvD~~~~s~hK~l~g~p-G-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~ 272 (406)
T TIGR01814 198 HAKGALVGFDLAHAV-GNV--PLDLHDWGVDFACWCTYKYLNAGP-G-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMD 272 (406)
T ss_pred HHcCCEEEEEccccc-CCc--ccccccCCCCEEEEcCccccCCCC-C-eEEEEehhhhhhcCCCCCcccCCCCccccccc
Confidence 357999999999994 433 123344454333 239998873 3 4444444333222210000 000 00000
Q ss_pred hh----------hhcc-HHHHHHHHh-hHHhH------HHHHHHHHHHHHHHHHHHHHhCC---ce--eeEEeeceeeEE
Q psy7882 77 LK----------ISDT-VRPHVQIKK-SVLER------FVHTYVVGNFLLTHLSKLREEFA---IV--GDVRGKGLMIGV 133 (329)
Q Consensus 77 ~T----------~agn-lA~aaala~-~ile~------le~v~~lG~~L~~gL~eL~~~~p---~v--~~VRG~GLm~gI 133 (329)
.+ .+-| .++++..+. +++++ .++.+.+.+++++.|+++....+ .+ .+.+.++.++++
T Consensus 273 ~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~ 352 (406)
T TIGR01814 273 NTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSL 352 (406)
T ss_pred cccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEE
Confidence 01 1123 233322223 44433 44556666666666655311011 11 122334556677
Q ss_pred EeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882 134 DLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQ-PKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 134 ef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~P-PL~It~~t~eeId~~l~~~ 197 (329)
.+. .. ...+.+.|.++||++... .+..||+.| ++.. |++|||++++++
T Consensus 353 ~~~-~~----------~~~~~~~L~~~gi~v~~~--~~~~iRiS~~~~~n---t~~did~l~~~l 401 (406)
T TIGR01814 353 THP-VP----------GKAVFQALIKRGVIGDKR--EPSVIRVAPVPLYN---TFVDVYDAVNVL 401 (406)
T ss_pred Eec-CC----------HHHHHHHHHHCCEEEecc--CCCeEEEechhccC---CHHHHHHHHHHH
Confidence 653 11 245778888999987643 247999999 6665 579999999985
No 116
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=97.90 E-value=0.00025 Score=68.34 Aligned_cols=161 Identities=11% Similarity=-0.015 Sum_probs=90.1
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
.||+++|+||+..+|......... .+-.++ ++|.++ .| +.+|.+++++++++.+.. .. .....++
T Consensus 156 ~~~~~ii~De~y~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~--~~---~~~~~s~ 227 (330)
T TIGR01140 156 ARGGWLVVDEAFIDFTPDASLAPQ--AARFPGLVVLRSLTKFFGLAG-LRLGFVVAHPALLARLRE--AL---GPWTVNG 227 (330)
T ss_pred hcCCEEEEECcccccCCccchhhH--hccCCCEEEEEecchhhcCch-hhhhheeCCHHHHHHHHh--cC---CCCCchH
Confidence 469999999999888543222211 111122 579998 77 489999999999888764 11 0111111
Q ss_pred hhccHHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHH
Q psy7882 79 ISDTVRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSC 157 (329)
Q Consensus 79 ~agnlA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l 157 (329)
.+. .++...+.. +.. +++++.-+..++.+.+..++++.+.-..+.|++..+.+.. ...+.+.|
T Consensus 228 ~~q-~~~~~~l~~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~~~~------------~~~l~~~l 291 (330)
T TIGR01140 228 PAR-AAGRAALADTAWQ---AATRARLAAERARLAALLARLGGLEVVGGTALFLLVRTPD------------AAALHEAL 291 (330)
T ss_pred HHH-HHHHHHHhchHHH---HHHHHHHHHHHHHHHHHHHhCCCceECCCCCeEEEEEcCC------------HHHHHHHH
Confidence 110 222233333 332 2334444444555555445556433233456666666531 23588999
Q ss_pred HHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882 158 KEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDC 196 (329)
Q Consensus 158 ~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~ 196 (329)
.++||++.+... ..+.+|+... . ..++ +.++++
T Consensus 292 ~~~gi~v~pg~~f~~~~~~~iRi~~~--~---~~~~-~~~~~~ 328 (330)
T TIGR01140 292 ARRGILIRDFDNFPGLDPRYLRFALP--T---DEEN-DRLEEA 328 (330)
T ss_pred HHCCEEEEECCCCCCCCCCEEEEEec--C---HHHH-HHHHHh
Confidence 999999988532 2367888542 1 2244 776655
No 117
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=97.89 E-value=0.00023 Score=68.03 Aligned_cols=171 Identities=12% Similarity=0.041 Sum_probs=97.5
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc----
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH---- 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h---- 75 (329)
..||+++|+|++++ +|.. .+....+ ..| ..|.++|+- -+|.+.+++++.+.+... . .++.+
T Consensus 152 ~~~~~~livD~~~s-~g~~--~~~~~~~--~~d~~~~s~~K~l~~~~-G~g~~~~~~~~~~~~~~~-~---~~~~~~~~~ 221 (355)
T TIGR03301 152 RSHGAVLIVDAMSS-FGAI--PIDIEEL--DVDALIASANKCLEGVP-GFGFVIARRDLLEASAGN-A---RSLYLDLYD 221 (355)
T ss_pred HHcCCEEEEEeccc-cCCc--ccchhhc--CccEEEecCCcccccCC-ceeEEEECHHHHHHhhCC-C---CCceeeHHH
Confidence 46799999999876 5422 2222333 345 359987652 368999999988776420 0 00000
Q ss_pred ---------chhhhcc-HHHH---HHHHh----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCcee-eEEeeceeeEEEee
Q psy7882 76 ---------KLKISDT-VRPH---VQIKK----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVG-DVRGKGLMIGVDLV 136 (329)
Q Consensus 76 ---------g~T~agn-lA~a---aala~----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~GLm~gIef~ 136 (329)
...|+.+ .++. ++++. ..+++ .++.++..+++.+.|+++ ....+. ..+..|+++.+.+.
T Consensus 222 ~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~--g~~~~~~~~~~~~~~~~~~~~ 299 (355)
T TIGR03301 222 QWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL--GFQPLLPERWQSPIIVSFLYP 299 (355)
T ss_pred HHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc--CCeeecCCCCCCCcEEEEECC
Confidence 0112233 2222 22221 11222 456677777777777654 122221 12344556666653
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHCCceeeccCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 137 QDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.... .....+.+.|.++||++.+++. ..+.+|+.+...+ +++|++++++++
T Consensus 300 ~~~~-------~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~---~~~~i~~~~~~l 351 (355)
T TIGR03301 300 DDPD-------FDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEI---DAADIERLLEAI 351 (355)
T ss_pred CCCc-------chHHHHHHHHHHCCEEEECCccccccEEEEecCCCC---CHHHHHHHHHHH
Confidence 2110 1235688899999999987531 2368999986555 589999999975
No 118
>PRK06108 aspartate aminotransferase; Provisional
Probab=97.79 E-value=0.00053 Score=66.70 Aligned_cols=165 Identities=11% Similarity=-0.026 Sum_probs=92.5
Q ss_pred ccccceEEehhHhhchhcc-chhhhhcccCC-cc-h-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDN-GTYLGFQCLQI-CR-F-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTP 73 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRT-G~~fA~e~~GV-~P-D-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~ 73 (329)
..+|+++|.||+..++... +... .....+ .+ | ++|.++ .| +.+|.+++++++.+.+.. .
T Consensus 188 ~~~~~~li~De~y~~~~~~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~~~~~~~~~~~~~~--~------ 257 (382)
T PRK06108 188 RRHGLWIVADEVYERLYYAPGGRA-PSFLDIAEPDDRIIFVNSFSKNWAMTG-WRLGWLVAPPALGQVLEK--L------ 257 (382)
T ss_pred HHCCcEEEEehhhhhhccCCCCCC-CCHhhcCCCcCCEEEEeechhhccCcc-cceeeeeCCHHHHHHHHH--H------
Confidence 3579999999999988442 1111 011122 11 2 679986 56 599999999998887653 1
Q ss_pred ccchhhhcc-H---HHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCC
Q psy7882 74 AHKLKISDT-V---RPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPL 145 (329)
Q Consensus 74 ~hg~T~agn-l---A~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~ 145 (329)
...++++.+ + ++..++.. +.+++ .+++++.-+++.+.|+++ +.+.-+... |+++.+.+....
T Consensus 258 ~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~p~~g~~~~~~l~~~~------ 327 (382)
T PRK06108 258 IEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRAL----PGVEVAKPDGAMYAFFRIPGVT------ 327 (382)
T ss_pred HHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC----CCCcccCCCeeEEEEEeCCCCC------
Confidence 111122233 3 33334433 23333 445555555565555543 322222233 444455653210
Q ss_pred ChHHHHHHHHHHH-HCCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 146 NSRHMTHILDSCK-EHGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 146 ~~~~~~~~~~~l~-e~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
....+...++ ++||++.+.. ...+.+|+.... +++++++.++.+
T Consensus 328 ---~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-----~~~~l~~~l~~l 376 (382)
T PRK06108 328 ---DSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-----DPARLDEAVERL 376 (382)
T ss_pred ---CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-----CHHHHHHHHHHH
Confidence 1245777765 5899997742 124689987654 478899888864
No 119
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=97.71 E-value=0.00067 Score=65.72 Aligned_cols=159 Identities=10% Similarity=0.048 Sum_probs=92.1
Q ss_pred ccceEEehhHhhchhccchh-hhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
+|+++|.||+...|-.-+.. .......-.+. ++|.++ .| +.+|.+++++++.+.+.. .. .+
T Consensus 182 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~~v~~~~~~~~~~~--~~--------~~ 250 (359)
T PRK03158 182 SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAA-LRVGYGIASEELIEKLNI--AR--------PP 250 (359)
T ss_pred CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcc-hhhehhcCCHHHHHHHHH--hc--------CC
Confidence 58999999998776322110 01111111111 679998 67 599999999999887763 11 12
Q ss_pred hhcc-HHHHHH---HHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882 79 ISDT-VRPHVQ---IKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI 153 (329)
Q Consensus 79 ~agn-lA~aaa---la~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~ 153 (329)
++.+ ++..++ ++. +. ++++.+.-...++.+.+..++++. ..+.+.|.++.+.+..+ ...+
T Consensus 251 ~~~~~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~g~~i~~~~~~~-----------~~~~ 315 (359)
T PRK03158 251 FNTTRIAQYAAIAALEDQAF---LKECVEKNAEGLEQYYAFCKEYGL-FYYPSQTNFIFVDTGRD-----------ANEL 315 (359)
T ss_pred CCCCHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHHHHHHHCCC-eeCCCcCcEEEEECCCC-----------HHHH
Confidence 3344 444333 333 33 333444444444445444445542 22445577777766310 2457
Q ss_pred HHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.|.++||++.++.. .++.+||. +. +.+|.+.++++.
T Consensus 316 ~~~l~~~gv~v~~g~~f~~~~~iRi~----~~--~~~~~~~l~~al 355 (359)
T PRK03158 316 FEALLKKGYIVRSGAALGFPTGVRIT----IG--LKEQNDKIIELL 355 (359)
T ss_pred HHHHHHCCeEEeeCCCCCCCCeEEEe----cC--CHHHHHHHHHHH
Confidence 7888899999988421 24678875 22 578999999875
No 120
>PLN02721 threonine aldolase
Probab=97.70 E-value=0.00058 Score=65.37 Aligned_cols=162 Identities=11% Similarity=0.077 Sum_probs=88.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCc-------ch-----HHHhhcCCccccce-eeechhHHHhhhhhhhccCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQIC-------RF-----VQKDFKGSFWDKLI-VHTSTCTFENFIKIKYQILK 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~-------PD-----i~KaLgGG~~PigA-v~~~~eI~d~~~~~~~~~~~ 71 (329)
..+|+++|+||.+. ++-.. ..++. .| ++|++++ |+|+ +++++++.+.+.....
T Consensus 168 ~~~g~~livD~a~~-~~~~~------~~~~~~~~~~~~~d~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~~---- 233 (353)
T PLN02721 168 KRHGLKLHIDGARI-FNASV------ALGVPVHRLVKAADSVSVCLSKGLGA---PVGSVIVGSKSFIRKAKRLRK---- 233 (353)
T ss_pred HHcCCEEEEEchhh-hcchh------hhCCCHHHHhhhCCEEEEecccccCC---ceeeEEecCHHHHHhHHHHHH----
Confidence 45799999999875 32110 11222 23 4698863 6775 5677887776542000
Q ss_pred CCccchhhhccHHHHHHHHh--hHHhHHHHHHHHHHHHHHHHHHHHHhCCcee-eE-EeeceeeEEEeecCCCCCCCCCh
Q psy7882 72 TPAHKLKISDTVRPHVQIKK--SVLERFVHTYVVGNFLLTHLSKLREEFAIVG-DV-RGKGLMIGVDLVQDKETKVPLNS 147 (329)
Q Consensus 72 ~~~hg~T~agnlA~aaala~--~ile~le~v~~lG~~L~~gL~eL~~~~p~v~-~V-RG~GLm~gIef~~d~~~~~p~~~ 147 (329)
..+++.......+++++.. +.++++++..++.+++.+.|+++ +.+. .+ ...+.++.+.+.... +
T Consensus 234 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~----~--- 301 (353)
T PLN02721 234 -TLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAKLLAEGLNQI----KGLRVNVAAVETNIVYFDITDGS----R--- 301 (353)
T ss_pred -hcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCcEEecCCccceEEEEEccCCc----c---
Confidence 0111111111122222222 22222344455566666666543 2221 11 122445666663210 0
Q ss_pred HHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 148 RHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 148 ~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.....+.+.|.++||.+.+.+ .+.+|+.+.+.. +++|++++++++
T Consensus 302 ~~~~~~~~~L~~~gi~v~~~~--~~~lR~~~~~~~---~~~~i~~~~~~l 346 (353)
T PLN02721 302 ITAEKLCKSLEEHGVLLMPGN--SSRIRVVTHHQI---SDSDVQYTLSCF 346 (353)
T ss_pred ccHHHHHHHHHhCCcEEecCC--CceEEEEecCcC---CHHHHHHHHHHH
Confidence 113568888899999999853 578999987665 589999999985
No 121
>PRK07324 transaminase; Validated
Probab=97.69 E-value=0.0011 Score=65.18 Aligned_cols=170 Identities=13% Similarity=-0.029 Sum_probs=92.0
Q ss_pred ccccceEEehhHhhchhccchhhhh-ccc--CCcch-HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGF-QCL--QICRF-VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~-e~~--GV~PD-i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
.+||+++|.||+..++...+..... +.+ +|.-. ++|.++ .| +-+|.+++++++.+.+.. ..+.+++
T Consensus 183 ~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G-~RiG~i~~~~~li~~~~~--------~~~~~~~ 253 (373)
T PRK07324 183 RSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPG-IRVGWIAANEEVIDILRK--------YRDYTMI 253 (373)
T ss_pred HHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCcc-ceeEEEecCHHHHHHHHH--------HhCcEEe
Confidence 3579999999999887554322111 111 12223 789998 66 489999999888887764 1122233
Q ss_pred hcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeecee-eEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLM-IGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 80 agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm-~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+.+ ++..++... +..++ +++.++.-+.-++.+.+..++++.+..++..|.+ .-+.+..+. -...+..
T Consensus 254 ~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~~---------~~~~~~~ 324 (373)
T PRK07324 254 CAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDM---------PSEDFCL 324 (373)
T ss_pred cCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCCC---------CHHHHHH
Confidence 333 333222221 11111 3333333333334444444455555455555543 333342110 1234666
Q ss_pred HHH-HCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCK-EHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~-e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+ ++||++.|+.. ..+.+|+. +.. +++.+.+.++..
T Consensus 325 ~ll~~~gv~v~pg~~F~~~~~iRis--~~~---~~~~l~~~l~rl 364 (373)
T PRK07324 325 KLLKETGVLLVPGNRFDLEGHVRIG--YCC---DTETLKKGLKKL 364 (373)
T ss_pred HHHHhcCEEEECccccCCCCeEEEE--ecC---CHHHHHHHHHHH
Confidence 665 67999998532 24678875 332 478888888764
No 122
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=97.68 E-value=0.001 Score=64.10 Aligned_cols=172 Identities=12% Similarity=-0.005 Sum_probs=93.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCC-------
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKT------- 72 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~------- 72 (329)
..+|+++|+|+++. +|.. .+....++ +| ..|.++++. .+|++.++++.++.+.. .......
T Consensus 151 ~~~~~~li~D~~~~-~g~~--~~~~~~~~--~d~~~~s~~K~l~~p~-g~G~l~~~~~~~~~~~~-~~~~~~~~~~~~~~ 223 (356)
T cd06451 151 KKHDALLIVDAVSS-LGGE--PFRMDEWG--VDVAYTGSQKALGAPP-GLGPIAFSERALERIKK-KTKPKGFYFDLLLL 223 (356)
T ss_pred HhcCCEEEEeeehh-ccCc--cccccccC--ccEEEecCchhccCCC-CcceeEECHHHHHHHHh-cCCCCceeecHHHH
Confidence 35799999999876 5432 22222233 46 349999864 68999999988766541 0000000
Q ss_pred --C-----ccchhhhcc--HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecC
Q psy7882 73 --P-----AHKLKISDT--VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQD 138 (329)
Q Consensus 73 --~-----~hg~T~agn--lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d 138 (329)
+ ...+|.+-. .+..++++. .-+++ .++..++.+++.+.|+++ .......-.+.+ .+..+.+..
T Consensus 224 ~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~- 300 (356)
T cd06451 224 LKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL--GLKLLAKPELRSPTVTAVLVPE- 300 (356)
T ss_pred HhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCeeccCcccCCCceEEEECCC-
Confidence 0 011111111 122222222 11222 556677777777777764 222222112222 222233321
Q ss_pred CCCCCCCChHHHHHHHHHHHHC-CceeeccC--CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 139 KETKVPLNSRHMTHILDSCKEH-GLLLGRGG--LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 139 ~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G--~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
. .....+.+.|.++ ||.+.+.. ..++.+|+.|.... +++|++++++++
T Consensus 301 ~--------~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~---~~e~v~~~~~~l 351 (356)
T cd06451 301 G--------VDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEA---TREDVLGVLSAL 351 (356)
T ss_pred C--------CCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCC---CHHHHHHHHHHH
Confidence 1 0135688899998 99987632 13578999997765 689999999985
No 123
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=97.55 E-value=0.0025 Score=61.73 Aligned_cols=170 Identities=12% Similarity=0.019 Sum_probs=92.8
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HH--HhhcCCccccceeeechhHHHhhhhhhhcc---CC-----
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQ--KDFKGSFWDKLIVHTSTCTFENFIKIKYQI---LK----- 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~--KaLgGG~~PigAv~~~~eI~d~~~~~~~~~---~~----- 71 (329)
..+|+++|.|+.++ +|.. ........+| ++ |.+++ ..+|++++++++.+.+.+...+. ..
T Consensus 166 ~~~~~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~~~--~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 238 (373)
T cd06453 166 HEAGVPVLVDGAQS-AGHM----PVDVQDLGCDFLAFSGHKMLGP--TGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEE 238 (373)
T ss_pred HHcCCEEEEEhhhh-cCce----eeeccccCCCEEEeccccccCC--CCcEEEEEchHHhhcCCCeecCCCccccccccc
Confidence 46899999999886 3332 1111123467 23 99876 35788889988876654200000 00
Q ss_pred --------CCccchhhhc-c-HHHHHHHHh-h--HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeec
Q psy7882 72 --------TPAHKLKISD-T-VRPHVQIKK-S--VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQ 137 (329)
Q Consensus 72 --------~~~hg~T~ag-n-lA~aaala~-~--ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~ 137 (329)
.+. ++|... + ++..++++. + -+++ .++.+++.+++.+.|+++- ....+.+....+.++.|.+..
T Consensus 239 ~~~~~~~~~~~-~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~ 316 (373)
T cd06453 239 TTYADLPHKFE-AGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIP-GVRVYGDAEDRAGVVSFNLEG 316 (373)
T ss_pred cccCCCccccC-CCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCC-CeEEeCCccccCCeEEEEECC
Confidence 000 111111 1 333333332 1 1122 4455566666666665431 111222223346677777632
Q ss_pred CCCCCCCCChHHHHHHHHHHHHCCceeeccCC----------CCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882 138 DKETKVPLNSRHMTHILDSCKEHGLLLGRGGL----------SGNTLTALQPKLLNYWTDFVGTPCLDC 196 (329)
Q Consensus 138 d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~----------~~nvIrl~PPL~It~~t~eeId~~l~~ 196 (329)
. ....+.+.|.++||.+.+... .++.+|+.+.... |++|+|+++++
T Consensus 317 -~---------~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~---t~~di~~~~~~ 372 (373)
T cd06453 317 -I---------HPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYN---TEEEIDALVEA 372 (373)
T ss_pred -c---------CHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCC---CHHHHHHHHhh
Confidence 1 134688888999998864221 1468999998776 68999999876
No 124
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=97.49 E-value=0.0017 Score=62.11 Aligned_cols=147 Identities=10% Similarity=0.024 Sum_probs=77.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HH----HhhcCCccccceeeec-hhHHHhhhhhhhccCC-----
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQ----KDFKGSFWDKLIVHTS-TCTFENFIKIKYQILK----- 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~----KaLgGG~~PigAv~~~-~eI~d~~~~~~~~~~~----- 71 (329)
..+|+++|.|++|+ +|... .-...|...| ++ |.+++| +.|+++++ +++.+.+.........
T Consensus 130 ~~~~i~li~D~a~~-~g~~~---~~~~~~~~~d~~~~S~~~~K~~~~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (352)
T cd00616 130 KRHGLPVIEDAAQA-LGATY---KGRKVGTFGDAGAFSFHPTKNLTTG--EGGAVVTNDEELAERARLLRNHGRDRDRFK 203 (352)
T ss_pred HHcCCeEEEECCCC-CCCeE---CCEEcccCcceeEEcCCCCCCCccc--CceEEEECCHHHHHHHHHHHHcCCCCCCCc
Confidence 35799999999998 33221 1112333345 33 999655 45667665 4666654320011000
Q ss_pred --CCccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE---EeeceeeEEEeecCCCCCC
Q psy7882 72 --TPAHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV---RGKGLMIGVDLVQDKETKV 143 (329)
Q Consensus 72 --~~~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V---RG~GLm~gIef~~d~~~~~ 143 (329)
....+.++... +.++.++.. +.+++ .++.+++.+++++.|+++. ....+... .....++.+.+.....
T Consensus 204 ~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~--- 279 (352)
T cd00616 204 YEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREIAERYKELLADLP-GIRLPDVPPGVKHSYHLYVIRLDPEAG--- 279 (352)
T ss_pred cccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCC-CccCCCCCCCCceeeEEEEEEECCcCC---
Confidence 01122334444 566666554 44444 6677888888888887641 11111111 1233456666532100
Q ss_pred CCChHHHHHHHHHHHHCCceee
Q psy7882 144 PLNSRHMTHILDSCKEHGLLLG 165 (329)
Q Consensus 144 p~~~~~~~~~~~~l~e~GVLl~ 165 (329)
.....+.+.|.++||.+.
T Consensus 280 ----~~~~~v~~~L~~~gI~~~ 297 (352)
T cd00616 280 ----ESRDELIEALKEAGIETR 297 (352)
T ss_pred ----CCHHHHHHHHHHCCCCee
Confidence 124568888889999765
No 125
>PRK03321 putative aminotransferase; Provisional
Probab=97.49 E-value=0.0015 Score=63.12 Aligned_cols=156 Identities=10% Similarity=0.023 Sum_probs=89.1
Q ss_pred ccceEEehhHhhchhccchh-hhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
+++++|.||+...|...+.. .+.+...-.|+ ++|.++ .| +-+|.+++++++++.+.. . ..+
T Consensus 176 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~~v~~~~~~~~~~~--~--------~~~ 244 (352)
T PRK03321 176 ADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAG-LRVGYAVGHPEVIAALRK--V--------AVP 244 (352)
T ss_pred CCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHH-HhhhhhcCCHHHHHHHHH--h--------cCC
Confidence 58999999999887554321 11222222344 579997 67 488999999999988764 1 112
Q ss_pred hhcc-HHHHH---HHHh-hHH-hHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 79 ISDT-VRPHV---QIKK-SVL-ERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 79 ~agn-lA~aa---ala~-~il-e~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
++.+ ++..+ ++.. +.+ ++..++.+.-+.+.+.|+ .++.. .....|.++.+.+.. ....
T Consensus 245 ~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~----~~~~~-~~~~~g~~i~i~l~~-----------~~~~ 308 (352)
T PRK03321 245 FSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALR----AAGWT-VPPSQANFVWLPLGE-----------RTAD 308 (352)
T ss_pred CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH----HCCCc-cCCCCCCEEEEeCCC-----------CHHH
Confidence 2333 33332 3322 222 112222222223333333 33321 122347777666531 0345
Q ss_pred HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.+.|.++||++.+.+ .+.+|+.. .+.++.++++++.
T Consensus 309 ~~~~l~~~gI~v~~~~--~~~iRi~~------~~~~~~~~~~~al 345 (352)
T PRK03321 309 FAAAAAEAGVVVRPFA--GEGVRVTI------GAPEENDAFLRAA 345 (352)
T ss_pred HHHHHHHCCEEEEccC--CCcEEEee------CCHHHHHHHHHHH
Confidence 7888899999998864 34588873 2578999999875
No 126
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=97.47 E-value=0.0026 Score=61.59 Aligned_cols=81 Identities=11% Similarity=0.069 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEE
Q psy7882 97 FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTA 176 (329)
Q Consensus 97 le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl 176 (329)
.++..++.++|+++|+++ .+..+. .....++.+.+.. ...+.+.|.++|+++..+. .++.+|+
T Consensus 290 ~~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~v~~~~~~------------~~~v~~~L~~~gi~v~~~~-~~~~iRi 352 (373)
T TIGR03812 290 VAECMENTRYLVEELKKI--GFEPVI--EPVLNIVAFEVDD------------PEEVRKKLRDRGWYVSVTR-CPKALRI 352 (373)
T ss_pred HHHHHHHHHHHHHHHHhC--CCeEEc--CCCceEEEEEeCC------------HHHHHHHHHHCCceeccCC-CCCEEEE
Confidence 567778888888888765 222121 1122223333210 1358888999999997753 3678999
Q ss_pred eCccccCcCCHHHHHHHHhcc
Q psy7882 177 LQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 177 ~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.... |++|+|++++++
T Consensus 353 s~~~~~---t~edid~l~~~L 370 (373)
T TIGR03812 353 VVMPHV---TREHIEEFLEDL 370 (373)
T ss_pred EEECCC---CHHHHHHHHHHH
Confidence 887654 689999999875
No 127
>PRK07682 hypothetical protein; Validated
Probab=97.43 E-value=0.0021 Score=62.70 Aligned_cols=166 Identities=10% Similarity=0.043 Sum_probs=90.9
Q ss_pred ccccceEEehhHhhchhccchhhhh-cccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGF-QCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~-e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
..||+++|.||+...|...+...+. ...+..+. ++|.++ .| +.+|.+++++++.+.+.. .. ..
T Consensus 184 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-lR~G~~~~~~~~i~~l~~--~~------~~ 254 (378)
T PRK07682 184 EKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTG-WRLGFIAAPVYFSEAMLK--IH------QY 254 (378)
T ss_pred HHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChh-hhhhhhhcCHHHHHHHHH--HH------Hh
Confidence 3579999999999988665432211 11222222 579997 67 489999999999887763 11 01
Q ss_pred hhhhcc----HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecCCCCCCCCChH
Q psy7882 77 LKISDT----VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 77 ~T~agn----lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d~~~~~p~~~~ 148 (329)
++++.+ .+++++++. ..+++ .++.++.-+.+.+.|+++ +. .-....| +++-+.+.... .+
T Consensus 255 ~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~~-~~~~p~g~~~~~~~~~~~~-----~~-- 322 (378)
T PRK07682 255 SMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI----GL-TCHVPGGAFYAFPSISSTG-----LS-- 322 (378)
T ss_pred hccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC----CC-ccCCCCeeEEEEEeccCCC-----CC--
Confidence 112222 233334433 12222 333445555555555543 22 1122323 34444442211 11
Q ss_pred HHHHHHHHHH-HCCceeeccC---C-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCK-EHGLLLGRGG---L-SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~-e~GVLl~~~G---~-~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+...++ ++||++.++. . ..+.+|+.- .. +++++++.++..
T Consensus 323 -~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~--~~---~~~~l~~~l~~l 370 (378)
T PRK07682 323 -SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSY--AT---SLEQLQEAMKRM 370 (378)
T ss_pred -HHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEe--CC---CHHHHHHHHHHH
Confidence 245777765 6899998742 1 246788852 22 478999999874
No 128
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=97.39 E-value=0.0038 Score=61.12 Aligned_cols=170 Identities=14% Similarity=0.042 Sum_probs=88.8
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhc----cCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQ----ILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~----~~~~~~h 75 (329)
..||+++|+||++. .| .+. ..... ..+| ..|.+ | .++|.+.+++++.+.+.+.... .......
T Consensus 183 ~~~~~~~ivD~a~~-~~-~~~-~~~~~--~~~d~~~~s~~K~~--g-~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 254 (397)
T TIGR01976 183 HAAGALVVVDAVHY-AP-HGL-IDVQA--TGADFLTCSAYKFF--G-PHMGILWGRPELLMNLPPYKLTFSYDTGPERFE 254 (397)
T ss_pred HHcCCEEEEehhhh-cc-ccC-CCHHH--cCCCEEEEechhhc--C-CceEEEEEcHHHHhhCCCccccCccCCCcchhc
Confidence 45799999999985 22 111 11222 2356 35987 3 2689999999887765430000 0000011
Q ss_pred chhhhcc--HHHHHHHHh-h-H---------------HhH-HHHHHHHHHHHHHHHHHHHHhCCceee--EEeeceeeEE
Q psy7882 76 KLKISDT--VRPHVQIKK-S-V---------------LER-FVHTYVVGNFLLTHLSKLREEFAIVGD--VRGKGLMIGV 133 (329)
Q Consensus 76 g~T~agn--lA~aaala~-~-i---------------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~--VRG~GLm~gI 133 (329)
++|-.-. .++.++++- . + +++ .++..++.++++++|+++- ....+.. -.-.+-++.+
T Consensus 255 ~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~ 333 (397)
T TIGR01976 255 LGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLP-GVTLYGVARLAARVPTVSF 333 (397)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEeCCCCccCCCceEEE
Confidence 1222211 333333332 1 1 222 3455666666666665531 0111111 0112334444
Q ss_pred EeecCCCCCCCCChHHHHHHHHHHHHCCceeeccC-------------CCCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882 134 DLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG-------------LSGNTLTALQPKLLNYWTDFVGTPCLDC 196 (329)
Q Consensus 134 ef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G-------------~~~nvIrl~PPL~It~~t~eeId~~l~~ 196 (329)
.+.. . ....+.+.|.++||++..+. ..+..+|+.+.... |++|++.++++
T Consensus 334 ~~~~-~---------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~---t~~di~~l~~~ 396 (397)
T TIGR01976 334 TVHG-L---------PPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYN---TAEEVDRLLEA 396 (397)
T ss_pred EeCC-c---------CHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccC---CHHHHHHHHHh
Confidence 4421 0 12457888899999998641 12468999987754 68999999875
No 129
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=97.37 E-value=0.0025 Score=63.86 Aligned_cols=170 Identities=9% Similarity=0.002 Sum_probs=89.5
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechh-HHHhhhhhhhccCCCCccchh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTC-TFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~e-I~d~~~~~~~~~~~~~~hg~T 78 (329)
..||++||+|+.+. +|-.|........+ ..| +.|+|+|+. -|+++++++ +.+.+.. . ..++.
T Consensus 193 ~~~g~~livD~Aha-~G~~~~g~~~~~~~-~~Di~~~s~~K~l~g~~--GG~v~~~~~~~~~~~~~---~----~~~~~- 260 (416)
T PRK13034 193 DEVGALLMVDMAHI-AGLVAAGEHPNPFP-HAHVVTTTTHKTLRGPR--GGMILTNDEEIAKKINS---A----VFPGL- 260 (416)
T ss_pred HHcCCEEEEeCccc-ccCcccCCCCCCCC-CceEEEEeCcccCCCCC--CeEEEECcHHHHHHHHh---h----cCCcc-
Confidence 46799999999876 44443211111111 256 359997642 355566554 3333321 0 11111
Q ss_pred hhcc---HHHHHHHHh-hHHh----H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 79 ISDT---VRPHVQIKK-SVLE----R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 79 ~agn---lA~aaala~-~ile----~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
.++. ..++.+++- ++++ + .+++.++.++|+++|+++ .++.+.. .....+.-|.|..+. ..
T Consensus 261 ~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~--G~~~~~~-~~~t~i~~v~~~~~~--------~~ 329 (416)
T PRK13034 261 QGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER--GYDLVSG-GTDNHLLLVDLRPKG--------LS 329 (416)
T ss_pred cCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc--CCEeccC-CCCCcEEEEEcCCCC--------CC
Confidence 1111 111111121 2221 1 467888888888888764 2222210 012344455554311 01
Q ss_pred HHHHHHHHHHCCceeeccC--------CCCCEEEEeCccccC-cCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGG--------LSGNTLTALQPKLLN-YWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G--------~~~nvIrl~PPL~It-~~t~eeId~~l~~~ 197 (329)
...+.+.|.++||++...+ ..+..+|+.+..+.+ .++++||+.+++++
T Consensus 330 ~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l 386 (416)
T PRK13034 330 GKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWI 386 (416)
T ss_pred HHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHH
Confidence 2335577888999997521 023568988777555 77899999999985
No 130
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=97.35 E-value=0.0029 Score=62.10 Aligned_cols=172 Identities=12% Similarity=0.012 Sum_probs=90.2
Q ss_pred ccccceEEehhHh-hchhccchhhhhcccCCcch-----HHHhhcCCccccceeeech-hHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVD-FGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTST-CTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVq-TGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~-eI~d~~~~~~~~~~~~~~hg~ 77 (329)
..+|+++|.||++ .|+--.|... .... ..| +.|++ +| .+.|++++++ ++.+.+.. .. .+... +
T Consensus 186 ~~~~~~li~D~a~~~g~~~~g~~~--~~~~-~~dv~~~s~sK~l-~G-~~gg~i~~~~~~~~~~l~~--~~--~~~~~-~ 255 (402)
T cd00378 186 DEVGAYLLVDMAHVAGLVAGGVFP--NPLP-GADVVTTTTHKTL-RG-PRGGLILTRKGELAKKINS--AV--FPGLQ-G 255 (402)
T ss_pred HhcCCEEEEEccchhhhhhcccCC--Cccc-CCcEEEeccccCC-CC-CCceEEEeccHHHHHHHHH--Hh--Ccccc-C
Confidence 4679999999996 4542223111 1111 347 35999 44 3678888877 88777643 10 01111 1
Q ss_pred hhhcc--HHHHHHHHh--h-HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882 78 KISDT--VRPHVQIKK--S-VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 78 T~agn--lA~aaala~--~-ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
+.... .+++.++.. + .+++ .+++.+..+++.+.|.++ .......-. -+.++.+.+.... .+ ..
T Consensus 256 ~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~-~~~~v~v~~~~~~-----~~---~~ 324 (402)
T cd00378 256 GPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER--GFKVVSGGT-DNHLVLVDLRPKG-----IT---GK 324 (402)
T ss_pred CchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC--CCeEeecCC-CCeEEEEeCCccC-----CC---HH
Confidence 11111 222222322 1 2222 455666666777766653 122211111 2555556664211 01 23
Q ss_pred HHHHHHHHCCceeeccC--------CCCCEEEEeCccccC-cCCHHHHHHHHhcc
Q psy7882 152 HILDSCKEHGLLLGRGG--------LSGNTLTALQPKLLN-YWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~e~GVLl~~~G--------~~~nvIrl~PPL~It-~~t~eeId~~l~~~ 197 (329)
.+.+.|.++||++.+.. ...+.+|+.+..+.+ .++++|++++++++
T Consensus 325 ~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l 379 (402)
T cd00378 325 AAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFI 379 (402)
T ss_pred HHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHH
Confidence 45666788999996421 134678987765442 34689999999974
No 131
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=97.34 E-value=0.0026 Score=61.44 Aligned_cols=157 Identities=10% Similarity=0.008 Sum_probs=83.4
Q ss_pred cccceEEehhHhhchhccchhhhh-cccC-Cc-ch-HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGF-QCLQ-IC-RF-VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~-e~~G-V~-PD-i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.+|+++|.||++.+|. .+..-.. ..+. +. =. ++|+++ .| +.+|.+++++++.+.+.. .. .+++
T Consensus 186 ~~~~~li~De~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~--~~--------~~~~ 253 (361)
T PRK00950 186 STDALVFVDEAYVEFA-EYDYTPLALEYDNLIIGRTFSKVFGLAG-LRIGYGFVPEWLIDYYMR--AK--------TPFS 253 (361)
T ss_pred HCCcEEEEECchhhhC-ccchHHHHHhcCCEEEEEeehHhhcCch-hhcchhcCCHHHHHHHHH--hc--------CCCC
Confidence 3589999999998874 1111111 1110 00 00 579997 66 489999999998877653 11 1112
Q ss_pred cc-HHH---HHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRP---HVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~---aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
.+ ++. .+++.. +.+++ ..+.-...++.|.+... +.-...-|.++-+.+. . . ....+.+
T Consensus 254 ~~~~~~~~a~~~l~~~~~~~~---~~~~~~~~r~~l~~~l~----~~~~~~~~~~i~~~~~-~------~---~~~~~~~ 316 (361)
T PRK00950 254 LTRLSQAAAIAALSDKEYIEK---SIEHGIKSREYLYNELP----FKVYPSEANFVLVDVT-P------M---TAKEFCE 316 (361)
T ss_pred CCHHHHHHHHHHhcCHHHHHH---HHHHHHHHHHHHHhhcC----eeECCCcceEEEEECC-C------C---CHHHHHH
Confidence 22 222 223333 33332 22222223333322211 1111123455556652 1 1 1346888
Q ss_pred HHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|.++||++.++.. ..+.+|+... +.+|++++++++
T Consensus 317 ~l~~~gv~v~~~~~f~~~~~~~lRis~~------~~~~~~~l~~~L 356 (361)
T PRK00950 317 ELLKRGVIVRDCTSFRGLGDYYIRVSIG------TFEENERFLEIL 356 (361)
T ss_pred HHHHCCEEEeeCCccCCCCCCeEEEECC------CHHHHHHHHHHH
Confidence 88899999987421 2457888742 467999999875
No 132
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=97.32 E-value=0.0046 Score=63.67 Aligned_cols=171 Identities=9% Similarity=-0.049 Sum_probs=95.9
Q ss_pred cccceEEehhHhhchhccchhhhhcccCC--cch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQI--CRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV--~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
.+|++|++|+.|+ +|-.|.....+.++. ..| +.|+|.|-. -|.+++++++.+.+.. . .++..|+.
T Consensus 246 ~~gA~L~VD~AH~-~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~--GG~I~~~~~l~~~L~~--a---~P~i~gg~ 317 (493)
T PRK13580 246 EVGAVLMVDMAHF-AGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPR--GGLVLAKKEYADAVDK--G---CPLVLGGP 317 (493)
T ss_pred HcCCEEEEECchh-hceeccccchhhcCCCCCCcEEEeCChhhccCCC--eEEEEecHHHHHHHhh--C---CCcccCCC
Confidence 5799999999998 555542221222222 245 359997631 3667778887776642 0 01211111
Q ss_pred hhcc-HHHHHHHHhhHH----hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH-HH
Q psy7882 79 ISDT-VRPHVQIKKSVL----ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH-MT 151 (329)
Q Consensus 79 ~agn-lA~aaala~~il----e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~-~~ 151 (329)
..-. .|.+.++. ++. .+ .+++.+..++|++.|++. .++.+.. ...--++-|.+.+ .+. ..
T Consensus 318 l~p~iAA~avAl~-e~~~~ef~~y~~~l~~Na~~La~~L~~~--G~~vv~g-gTdshIV~V~lg~---------~~~~g~ 384 (493)
T PRK13580 318 LPHVMAAKAVALA-EARTPEFQKYAQQVVDNARALAEGFLKR--GARLVTG-GTDNHLVLIDVTS---------FGLTGR 384 (493)
T ss_pred ccHHHHHHHHHHH-HHhCccHHHHHHHHHHHHHHHHHHHHhc--CCCccCC-CCCCCEEEEEeCC---------HHHHHH
Confidence 1111 11122221 222 11 567888888888888764 2333210 0122445555542 122 34
Q ss_pred HHHHHHHHCCceeeccC----C----CCCEEEEeCccccC-cCCHHHHHHHHhcc
Q psy7882 152 HILDSCKEHGLLLGRGG----L----SGNTLTALQPKLLN-YWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~e~GVLl~~~G----~----~~nvIrl~PPL~It-~~t~eeId~~l~~~ 197 (329)
.+.+.|.+.||++.... + ....|||.++-+.+ .++++|++++++++
T Consensus 385 ~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l 439 (493)
T PRK13580 385 QAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELI 439 (493)
T ss_pred HHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHH
Confidence 56778999999997421 1 14679999776554 67899999999975
No 133
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=97.31 E-value=0.0013 Score=64.41 Aligned_cols=178 Identities=10% Similarity=0.015 Sum_probs=89.4
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhc--cCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQ--ILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~--~~~~~~hg~ 77 (329)
..+|+++|+||.+. +|..+.-. ....+| ++|++++|. |+|.+++++++.+.+...... .......++
T Consensus 173 ~~~~~~livDea~~-~g~~~~~~----~~~~~di~v~s~sK~~~~~g-~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~ 246 (370)
T TIGR02539 173 REKGVPLLLNCAYT-VGRMPVSA----KEIGADFIVGSGHKSMAASG-PCGVLGMSEEWEDIVLRKSRYSPVKEVELLGC 246 (370)
T ss_pred HHcCCeEEEECccc-cCCcCCCH----HHcCCCEEEeeCcccccCCC-CEEEEEECHHHHhhhcccccCCccceeeeecc
Confidence 45699999999987 33222111 112356 469998764 899999999988876531000 000001112
Q ss_pred hhhcc--HHHHHHHHh--hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882 78 KISDT--VRPHVQIKK--SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI 153 (329)
Q Consensus 78 T~agn--lA~aaala~--~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~ 153 (329)
|.... .+..+++.. +.+++..+..+..++|+++|+++ ....+..--...-++.+++..-...... +......+
T Consensus 247 ~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~s~t~~v~~~~~~~~~~~~~-~~~~~~~~ 323 (370)
T TIGR02539 247 TSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDI--GFIQLGQKPKEHDLVKFETPGFHEIAQK-HKRRGYFL 323 (370)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcEEEccCCCcCceEEEECCchhHHhhh-hccccHHH
Confidence 21111 222222321 22222222333456777777764 1111100011222333433100000000 01123468
Q ss_pred HHHHHHCCce-eeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLL-LGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVL-l~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.|.++||+ +++. ..+.+|+.. + .++++|++++++++
T Consensus 324 ~~~L~e~GI~~ir~~--~~~~iRis~-~---~~t~e~i~~l~~~L 362 (370)
T TIGR02539 324 YEELKKRGIHGIRSG--QTKYFKLSV-Y---GLTKEQVEYVVDSF 362 (370)
T ss_pred HHHHHhCCCccccCC--cceEEEEEe-c---CCCHHHHHHHHHHH
Confidence 8999999997 5542 245888875 2 25899999999985
No 134
>PRK05764 aspartate aminotransferase; Provisional
Probab=97.25 E-value=0.0043 Score=60.75 Aligned_cols=175 Identities=9% Similarity=-0.025 Sum_probs=88.3
Q ss_pred ccccceEEehhHhhchhccchh-hhhcc--cCCcc-h-----HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTY-LGFQC--LQICR-F-----VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~--~GV~P-D-----i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~ 74 (329)
..||+++|.||+...+...|.. .+... .+..+ + ++|.++ .|+ .+|.+++++++.+.+.. ... ....
T Consensus 194 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~-RiG~i~~~~~~~~~~~~--~~~-~~~~ 269 (393)
T PRK05764 194 VEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGW-RLGYAAGPKELIKAMSK--LQS-HSTS 269 (393)
T ss_pred HHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccc-eeEEEecCHHHHHHHHH--HHh-hccc
Confidence 3579999999998766332321 11111 11111 1 579998 774 89999999999887753 110 0011
Q ss_pred cchhhhccHHHHHHHH-h-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecCCCCCCCCChHHH
Q psy7882 75 HKLKISDTVRPHVQIK-K-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQDKETKVPLNSRHM 150 (329)
Q Consensus 75 hg~T~agnlA~aaala-~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d~~~~~p~~~~~~ 150 (329)
+.++++. .++..+++ . +.+++ .++.++..+.+.+.| ++++.+.-.+..| .++.+.+..... ... ...
T Consensus 270 ~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L----~~~~g~~~~~~~g~~~~~~~~~~~~~-~~~---~~~ 340 (393)
T PRK05764 270 NPTSIAQ-YAAVAALNGPQDEVEEMRQAFEERRDLMVDGL----NEIPGLECPKPEGAFYVFPNVSKLLG-KSI---TDS 340 (393)
T ss_pred CCChHHH-HHHHHHHcCChHHHHHHHHHHHHHHHHHHHHH----hhCCCCcccCCCcceEEEEecccccc-ccc---CCH
Confidence 1111111 22223333 1 22222 222333333344444 3443332233444 445555532110 000 012
Q ss_pred HHHHHHHH-HCCceeeccCCC--CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCK-EHGLLLGRGGLS--GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~-e~GVLl~~~G~~--~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.++...++ ++||.+.++... .+.+|+. +.. +++++++++++.
T Consensus 341 ~~~~~~l~~~~gi~v~~g~~f~~~~~vRis--~~~---~~~~~~~~i~~l 385 (393)
T PRK05764 341 LEFAEALLEEAGVAVVPGIAFGAPGYVRLS--YAT---SLEDLEEGLERI 385 (393)
T ss_pred HHHHHHHHHhCCEEEccccccCCCCEEEEE--ecC---CHHHHHHHHHHH
Confidence 45666665 579999875322 4788886 322 589999999875
No 135
>PRK07550 hypothetical protein; Provisional
Probab=97.22 E-value=0.0075 Score=59.12 Aligned_cols=167 Identities=8% Similarity=-0.060 Sum_probs=87.8
Q ss_pred ccccceEEehhHhhchhccchhh--hhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYL--GFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~f--A~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
.++++++|.||+...|.-.+... .....+-.+. ++|.++ .| +.+|.+++++++++.+.. ...
T Consensus 193 ~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~--------~~~ 263 (386)
T PRK07550 193 RRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTG-HRVGAVVASPARIAEIEK--------FMD 263 (386)
T ss_pred HHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcc-cceEeeecCHHHHHHHHH--------HHh
Confidence 45799999999998773211100 0011111111 679997 77 489999999988877653 111
Q ss_pred chhhhcc----HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCCh
Q psy7882 76 KLKISDT----VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNS 147 (329)
Q Consensus 76 g~T~agn----lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~ 147 (329)
..+.+.+ .+++.++.. +.+++ .++.++..+.+.+.|+.. +.+ .+... |.+.-+.+.... .
T Consensus 264 ~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~-~~~~~g~~~~~~~~~~~~-----~-- 331 (386)
T PRK07550 264 TVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARL----PGW-ELLASGAYFAYVRHPFPD-----R-- 331 (386)
T ss_pred hcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhC----CCc-eeCCCceEEEEecCCCCC-----C--
Confidence 1112222 233333332 22222 233444444555555443 222 22233 344455553201 1
Q ss_pred HHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 148 RHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 148 ~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
-...+...|. ++||++.++.. ..+.+|+.-.. .++++++++++..
T Consensus 332 -~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~----~~~~~~~~~~~~l 381 (386)
T PRK07550 332 -PSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFAN----ADVAGIGELVERL 381 (386)
T ss_pred -CHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeec----CCHHHHHHHHHHH
Confidence 1345767664 68999988421 24578886542 2478999998864
No 136
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=97.22 E-value=0.0053 Score=60.81 Aligned_cols=173 Identities=9% Similarity=-0.003 Sum_probs=87.8
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeec-hhHHHhhhhhhhccCCCCccchh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTS-TCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
..+|+++|.||++. +|.++........+ ..| +.|+++| .+.|+++++ +++.+.+.. .. .++. .++
T Consensus 190 ~~~~~~livD~a~~-~g~~~~g~~~~~~~-~~di~~~S~~K~l~g--~~gg~i~~~~~~~~~~l~~--~~--~~~~-~~~ 260 (416)
T PRK00011 190 DEVGAYLMVDMAHI-AGLVAAGVHPSPVP-HADVVTTTTHKTLRG--PRGGLILTNDEELAKKINS--AV--FPGI-QGG 260 (416)
T ss_pred HHcCCEEEEECcch-hcccccCccCCCCC-CCcEEEecCCcCCCC--CCceEEEeCCHHHHHHHHH--Hh--Cccc-cCC
Confidence 45799999999975 23332100011122 346 3599954 267788885 578776653 11 0111 111
Q ss_pred hhcc-HHH-HHHH-Hh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 79 ISDT-VRP-HVQI-KK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 79 ~agn-lA~-aaal-a~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
.... ++. .+++ +. +.+++ .++..+..+++++.|+++ ......+ .....++.+.+.+.. + ....
T Consensus 261 ~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~-~~~~~~~~i~~~~~~-----~---~~~~ 329 (416)
T PRK00011 261 PLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER--GFRVVSG-GTDNHLVLVDLRSKG-----L---TGKE 329 (416)
T ss_pred ccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC--CCeeeec-CCCCeEEEEeCcccC-----C---CHHH
Confidence 1111 111 1111 11 12233 667788888888888764 1111110 012244445543210 1 1245
Q ss_pred HHHHHHHCCceeeccC--------CCCCEEEEeCcc-ccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCKEHGLLLGRGG--------LSGNTLTALQPK-LLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G--------~~~nvIrl~PPL-~It~~t~eeId~~l~~~ 197 (329)
+.+.|.++||.+.... ..++.+|+...- +...++++|++++++++
T Consensus 330 ~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l 383 (416)
T PRK00011 330 AEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELI 383 (416)
T ss_pred HHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHH
Confidence 7788889999987321 113456764322 22135789999999985
No 137
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=97.18 E-value=0.0064 Score=59.04 Aligned_cols=158 Identities=9% Similarity=-0.078 Sum_probs=90.7
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
.+++++|.||+...|...-.+... .. .|+ ++|.++ .|+ -+|.+++++++.+.+.. .. ...+.++
T Consensus 161 ~~~~~vI~DEay~~~~~~~s~~~~--~~-~~~vi~l~SfSK~~gl~Gl-RiGy~v~~~~li~~l~~--~~---~~~~vs~ 231 (339)
T PRK06959 161 ARGGTLIVDEAFADTLPAASLAAH--TD-RPGLVVLRSVGKFFGLAGV-RAGFVLAAPALLAALRD--AL---GAWTVSG 231 (339)
T ss_pred HcCCEEEEECCCccCCCcccchhc--cC-CCCEEEEecChhhcCCcch-heEEEecCHHHHHHHHH--hc---CCCCCcH
Confidence 357889999998877321111111 11 233 679998 784 89999999999988764 11 0111122
Q ss_pred hhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 79 ISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 79 ~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
.+ -.+..++++. +..++ .+.+++.-+++.+.|+++ +. .+...|.++-+.+.. ...+...
T Consensus 232 ~~-q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~----g~--~~~~~~~f~~~~~~~------------~~~l~~~ 292 (339)
T PRK06959 232 PA-RHAVRAAFADAAWQAAMRERLAADGARLAALLRAH----GF--AVHATPLFSWTDDPR------------AAALHAA 292 (339)
T ss_pred HH-HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC----CC--CccCcceEEEEeCCC------------HHHHHHH
Confidence 21 1334444544 44333 444555555666666553 22 122234444444310 2458889
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|.++||+++.++ ..+.+|+. +. .+.+|.+.+++++
T Consensus 293 l~~~GI~vr~~~-~~~~lRis----i~-~~~~e~~~l~~al 327 (339)
T PRK06959 293 LARRGIWTRYFA-PPPSVRFG----LP-ADEAEWQRLEDAL 327 (339)
T ss_pred HHhCCeEEEECC-CCCeEEEE----CC-CCHHHHHHHHHHH
Confidence 999999998765 34578876 21 1467889998875
No 138
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=97.10 E-value=0.012 Score=56.71 Aligned_cols=157 Identities=9% Similarity=-0.042 Sum_probs=87.2
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
.+|+++|.||+..-|.-.+..-......-.+. ++|.++ .|+ =+|-+++++++.+.+.. .. ..
T Consensus 153 ~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl-RiGy~v~~~~li~~l~~--------~~--~~ 221 (332)
T PRK06425 153 KKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSL-RIGYIATDDYNMKISRK--------IT--EP 221 (332)
T ss_pred HcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchh-hheeeecCHHHHHHHHH--------cC--CC
Confidence 46899999999887743221001111111122 689999 884 89999999999887763 11 11
Q ss_pred hhcc-HHHHHHHHh----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882 79 ISDT-VRPHVQIKK----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 79 ~agn-lA~aaala~----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
+..+ .+. +++.. ..+++ .+..++.-+++.+.|++ ++. ..+ ...|.++-+.+. + ..
T Consensus 222 ~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~-~~~~~~~g~f~~~~~~-~-----------~~ 283 (332)
T PRK06425 222 WSVCDPAI-DFIRSIDLDYVAKHSLDIMENERSYLINNLEA----MGF-RAAGDPSANFITFMIP-D-----------AH 283 (332)
T ss_pred CccCHHHH-HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH----CCC-EECCCCCceEEEEEcC-C-----------HH
Confidence 2222 222 22222 22222 23334444444444443 332 112 234666656552 1 24
Q ss_pred HHHHHHHHCCceeeccCCC----CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDSCKEHGLLLGRGGLS----GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~e~GVLl~~~G~~----~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.+.|.++||.+.++... .+.+|+. +. +.++.+.+++++
T Consensus 284 ~~~~~l~~~gi~v~~~~~f~~~~~~~iRis----~~--~~~~~~~l~~al 327 (332)
T PRK06425 284 DFYSYLLKNGILVRLLDDYECLGEQYIRIA----IR--RRSFNIKLVNAL 327 (332)
T ss_pred HHHHHHHHCCeEEEECCCCCCCCCCEEEEE----eC--CHHHHHHHHHHH
Confidence 5778888999999885322 3567764 22 578999999875
No 139
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=97.07 E-value=0.015 Score=57.09 Aligned_cols=166 Identities=13% Similarity=-0.001 Sum_probs=86.4
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HH--HhhcCCccccceeeechhHHHhhhhhhhccCC--------
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQ--KDFKGSFWDKLIVHTSTCTFENFIKIKYQILK-------- 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~--KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~-------- 71 (329)
..+|+++|+|++|. +|.. . .... ...+| ++ |.++ . .-+|.+.+++++.+.+.+. .....
T Consensus 184 ~~~~~~~ivD~a~~-~~~~-~-~~~~--~~~~d~~~~s~~K~~g-p-~G~G~l~~~~~~~~~~~~~-~~~~~~~~~~~~~ 255 (398)
T TIGR03392 184 HQYGAVVVVDGAQG-VVHG-P-PDVQ--ALDIDFYAFSGHKLYG-P-TGIGVLYGKTELLEAMPPW-QGGGKMLSHVSFD 255 (398)
T ss_pred HHcCCEEEEEhhhh-cCCC-C-CChh--hcCCCEEEEecccccC-C-CceEEEEEcHHHHhhCCCe-ecCCceEeecccc
Confidence 45799999999996 3221 1 1112 23467 34 9543 2 1378888898887655320 00000
Q ss_pred --------CCccchhhhc-c-HHHHHHHHhhHHhH--H----HHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEE
Q psy7882 72 --------TPAHKLKISD-T-VRPHVQIKKSVLER--F----VHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVD 134 (329)
Q Consensus 72 --------~~~hg~T~ag-n-lA~aaala~~ile~--l----e~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIe 134 (329)
.....+|..- + +++.+++ +.+++ + ++..++.+++.+.|++ .+.+.-.. ..+.++.+.
T Consensus 256 ~~~~~~~~~~~e~GT~~~~~~~a~~~al--~~l~~~g~~~i~~~~~~l~~~l~~~l~~----l~g~~~~~~~~~~i~~~~ 329 (398)
T TIGR03392 256 GFIPQAVPHRFEAGTPNIAGVIGLSAAL--EWLTDIDIAAAEAWSVSLADLAEERLAQ----LPGFRSFRCPGSSLLAFD 329 (398)
T ss_pred ccccCCChhhccCCCCCHHHHHHHHHHH--HHHHHhCHHHHHHHHHHHHHHHHHHHhc----CCCeEEeCCCCCcEEEEE
Confidence 0001112221 1 3444443 33322 2 3444555555555543 33221111 123355555
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC----------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL----------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~----------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.. . + ...+...|.++||.++.... .+..||+.|.... |++|+|.+++++
T Consensus 330 ~~~-~------~---~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~---t~~ei~~l~~~l 389 (398)
T TIGR03392 330 FAG-V------H---HSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYN---TQQDVDALVDAV 389 (398)
T ss_pred eCC-c------C---HHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccC---CHHHHHHHHHHH
Confidence 421 0 1 23577778899999875321 1368999998764 689999999985
No 140
>PRK09105 putative aminotransferase; Provisional
Probab=97.03 E-value=0.012 Score=57.91 Aligned_cols=159 Identities=9% Similarity=0.068 Sum_probs=87.5
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+|+++|.||+...|+..... .+...-.++ ++|.+| .| +-+|.+++++++.+.+.. .. .+..+.
T Consensus 196 ~~~~lIvDEaY~~f~~~~s~--~~~~~~~~~vi~~~SfSK~~g~~G-lRiG~~v~~~~~i~~l~~--~~-----~~~~~~ 265 (370)
T PRK09105 196 AGSVLLVDEAYIHFSDAPSV--VDLVAQRKDLIVLRTFSKLYGMAG-MRLGLAAARPDLLAKLAR--FG-----HNPLPV 265 (370)
T ss_pred CCcEEEEECchHHhccCcch--HHHHhhCCCEEEEecccHhhcCCc-cceeeeecCHHHHHHHHh--cC-----CCCcCH
Confidence 58999999999777431111 111111233 579996 66 489999999999887763 10 111111
Q ss_pred hccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHH
Q psy7882 80 SDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSC 157 (329)
Q Consensus 80 agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l 157 (329)
.+..+..+++.. +.+++ .++.++.-+++.+.|++ ++. .-+...|.++.+.+.. + ...+.+.|
T Consensus 266 ~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~-~~~~~~~~f~~~~~~~--------~---~~~l~~~L 329 (370)
T PRK09105 266 PAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKK----KGY-KCTPSQANCFMVDVKR--------P---AKAVADAM 329 (370)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH----CCC-CcCCCCCcEEEEeCCC--------C---HHHHHHHH
Confidence 111222333333 44433 34455555555555544 332 1122445555455421 1 24588888
Q ss_pred HHCCceeecc-CCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 158 KEHGLLLGRG-GLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 158 ~e~GVLl~~~-G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.++||++... +..++.+|+... ++++++.+++++
T Consensus 330 ~~~gI~v~~~~~~~~~~~Ris~~------~~~~~~~l~~al 364 (370)
T PRK09105 330 AKQGVFIGRSWPIWPNWVRVTVG------SEEEMAAFRSAF 364 (370)
T ss_pred HHCCcEEecCCCCCCCeEEEEcC------CHHHHHHHHHHH
Confidence 9999998422 112567887632 468889988875
No 141
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=97.01 E-value=0.008 Score=57.84 Aligned_cols=164 Identities=12% Similarity=0.046 Sum_probs=90.3
Q ss_pred cccceEEehhHhhchhccch-hhh-hcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 6 YRDCGVVVSAVDFGSGDNGT-YLG-FQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~-~fA-~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
.+++++|.||+..++..... ++. .....-.++ ++|+++ -| +.+|.+++++++.+.+.. ... ....
T Consensus 179 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-lRvG~i~~~~~~~~~l~~--~~~---~~~~ 252 (363)
T PF00155_consen 179 EYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPG-LRVGYIVAPPELIERLRR--FQR---SGLS 252 (363)
T ss_dssp HTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGG-GTEEEEEEEHHHHHHHHH--HHH---HTTS
T ss_pred ccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccc-cccccccchhhhhhhhhh--ccc---cccc
Confidence 46999999999998844322 111 111122222 579986 56 488999999988887763 110 0111
Q ss_pred hhhhccHHHHHHHHh-h----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe--eceeeEEEeecCCCCCCCCChH
Q psy7882 77 LKISDTVRPHVQIKK-S----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG--KGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 77 ~T~agnlA~aaala~-~----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG--~GLm~gIef~~d~~~~~p~~~~ 148 (329)
++.... ++++.+.. . .+++ .+..++.-+++.+.|++. +. .+.+ -|.++-+.+.. .
T Consensus 253 ~~~~~~-~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----~~--~~~~~~~~~~~~~~~~~----------~ 315 (363)
T PF00155_consen 253 SSPMQA-AAAAALSDPELVEKWLEELRERLRENRDLLREALEEI----GI--TVLPPEAGFFLWVRLDP----------N 315 (363)
T ss_dssp SHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TS--EEEHHSBSSEEEEEESH----------H
T ss_pred cchhhH-HHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh----hh--heeeccCccEEEEEccc----------c
Confidence 222211 22223333 2 2222 334444444455544443 22 2222 35555555532 1
Q ss_pred HHHHHHHHHHHC-CceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882 149 HMTHILDSCKEH-GLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDC 196 (329)
Q Consensus 149 ~~~~~~~~l~e~-GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~ 196 (329)
....+.+.|+++ ||++.+... ..+.+|+.- ..+++++++++++.
T Consensus 316 ~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~----a~~~~e~~~~~~~~ 362 (363)
T PF00155_consen 316 DAEELAQELLEEYGILVRPGSYFGVPGYIRISL----ASHSEEDLEEALER 362 (363)
T ss_dssp HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG----GCSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe----ccCCHHHHHHHHhh
Confidence 245688889888 999988421 256788753 23478999999874
No 142
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=97.00 E-value=0.017 Score=56.80 Aligned_cols=165 Identities=12% Similarity=-0.017 Sum_probs=87.6
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhc--cC--------
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQ--IL-------- 70 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~--~~-------- 70 (329)
.+|+++|+|+++. .|-. -.... ...+| +.|.+| . ..+|++.+++++.+.+.+...+ ..
T Consensus 187 ~~~~~~ivD~a~~-~g~~--~~~~~--~~~~d~~~~s~~K~~g-p-~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 259 (403)
T TIGR01979 187 QVGAKVLVDGAQA-VPHM--PVDVQ--ALDCDFYVFSGHKMYG-P-TGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEET 259 (403)
T ss_pred HcCCEEEEEchhh-cCcc--ccCcc--ccCCCEEEEecccccC-C-CCceEEEEchHHHhcCCCeecCCCceeecccCcc
Confidence 4699999999985 3221 11112 23467 349653 2 2478888898876654320000 00
Q ss_pred ------CCCccchhhhcc--HHHHHHHHhhHHhH------HHHHHHHHHHHHHHHHHHHHhCCceeeEE-----eeceee
Q psy7882 71 ------KTPAHKLKISDT--VRPHVQIKKSVLER------FVHTYVVGNFLLTHLSKLREEFAIVGDVR-----GKGLMI 131 (329)
Q Consensus 71 ------~~~~hg~T~agn--lA~aaala~~ile~------le~v~~lG~~L~~gL~eL~~~~p~v~~VR-----G~GLm~ 131 (329)
..+.+ +|.... +++.+++ +.+.+ .++..++.+++.++|+++ +.+.-+. ..+.++
T Consensus 260 ~~~~~~~~~~~-gt~~~~~~~al~~al--~~~~~~g~~~~~~~~~~l~~~l~~~l~~~----~g~~~~~~~~~~~~~~~v 332 (403)
T TIGR01979 260 TYNEAPHKFEA-GTPNIAGVIGLGAAI--DYLEAIGLENIEAHEHELTAYALERLGEI----PGLRIYGPRDAEDRGGII 332 (403)
T ss_pred ccCCChhhcCC-CCccHHHHHHHHHHH--HHHHHhCHHHHHHHHHHHHHHHHHHHhcC----CCEEEeCCCCccccCceE
Confidence 00001 111111 3333333 23222 455666666666666543 2211110 125577
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccC----------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 132 GVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG----------LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 132 gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G----------~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.+... + ...+.+.|.++||.+++.. ..+..+|+.+.+.. |++|++++++++
T Consensus 333 ~~~~~~~-------~---~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~---t~~di~~l~~~l 395 (403)
T TIGR01979 333 SFNVEGV-------H---PHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYN---TEEDIDALVEAL 395 (403)
T ss_pred EEEeCCc-------C---HHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCC---CHHHHHHHHHHH
Confidence 7776321 0 2347778889999886421 01467999988665 589999999985
No 143
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=96.99 E-value=0.018 Score=55.84 Aligned_cols=153 Identities=7% Similarity=0.025 Sum_probs=86.7
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+++++|.||+...|...+..... ..-.+. ++|.++ .|+ -+|.+++++++.+.+.. . + .++
T Consensus 185 ~~~~iI~De~y~~~~~~~~~~~~--~~~~~~vi~~~SfSK~~~~~Gl-RiG~~~~~~~~~~~~~~--~-------~-~~~ 251 (357)
T PRK14809 185 EETLVVVDEAYGEFAERPSAVAL--VEERDDVAVLRTFSKAYGLAGL-RLGYAVVPEEWADAYAR--V-------N-TPF 251 (357)
T ss_pred cCcEEEEechhhhccCCchhHHH--HhhCCCEEEEecchhHhcCcch-hheeeecCHHHHHHHHH--h-------C-CCC
Confidence 37899999999988543332111 111111 679997 774 89999999998887763 1 1 123
Q ss_pred hcc-HHHHHHHH---h-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 80 SDT-VRPHVQIK---K-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 80 agn-lA~aaala---~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
+.+ ++..++++ . +.++ +..+.-+.-++.+.+..+.+. ...-|.++.+++.+ ...+.
T Consensus 252 ~~~~~~~~~a~~~l~~~~~~~---~~~~~~~~~r~~l~~~L~~~~----~~~~g~f~~~~~~~------------~~~~~ 312 (357)
T PRK14809 252 AASELACRAGLAALDDDEHVE---RTVETARWAREYIREELDAPT----WESAGNFVLAEVGD------------ASAVA 312 (357)
T ss_pred CCCHHHHHHHHHHhCCHHHHH---HHHHHHHHHHHHHHHHhcCcc----CCCCCCEEEEECCC------------HHHHH
Confidence 334 44333332 2 3332 222222222333333322221 13456777766521 23477
Q ss_pred HHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.|.++||++.++.. .++.+|+.- . +.++++++++++
T Consensus 313 ~~l~~~gv~v~~g~~f~~~~~iRls~---~---~~~~~~~~l~~L 351 (357)
T PRK14809 313 EAAQERGVIVRDCTSFGLPECIRITC---G---TREETERAVEVL 351 (357)
T ss_pred HHHHHCCEEEEECccCCCCCeEEEec---C---CHHHHHHHHHHH
Confidence 778899999988532 246788762 2 468999998874
No 144
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=96.96 E-value=0.0091 Score=58.91 Aligned_cols=181 Identities=9% Similarity=0.018 Sum_probs=89.1
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC--CCCccc
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL--KTPAHK 76 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~--~~~~hg 76 (329)
...+|+++|+|+++. +|..+ +....+|+ | ..|.++++. ++|.+++++++.+.+........ .....+
T Consensus 184 a~~~g~~livD~a~~-~g~~~--~~~~~~g~--D~~~~s~~K~l~~~~-~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~ 257 (387)
T PRK09331 184 AHEYGIPFLLNGAYT-VGRMP--VDGKKLGA--DFIVGSGHKSMAASA-PSGVLATTEEYADKVFRTSRKFGVKEVELLG 257 (387)
T ss_pred HHHcCCEEEEECCcc-cCCcC--CCHHHcCC--CEEEeeCcccccCCC-CEEEEEECHHHHhhcccccCCCcccceeeec
Confidence 346799999999987 33221 11123343 5 359998774 88999999988776542000000 000012
Q ss_pred hhhh--ccHHHHHHHHh--hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 77 LKIS--DTVRPHVQIKK--SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 77 ~T~a--gnlA~aaala~--~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
+|+. ..++..++++. +.++.+++..+..++++++|+++. .+....+-.....+..++.. .-.....-.......
T Consensus 258 ~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~-g~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~ 335 (387)
T PRK09331 258 CTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIE-GFKQLGEKPRNHDLMKFETP-SFDEIAKKHKRRGFF 335 (387)
T ss_pred eecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEeccCcCcCCeEEEeCC-chhHHhhhccccchh
Confidence 2222 11333333322 222223444556666766666541 01111100111223334332 000000000012355
Q ss_pred HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.+.|.++||+..+.+ .+.++++..+- ++++|++.+++++
T Consensus 336 ~~~~L~~~gI~~~~~~-~~~i~ri~~~g----~t~~di~~l~~aL 375 (387)
T PRK09331 336 LYEELKKRGIHGIKPG-ATKEFKLSTYG----LTWEQVEYVADAF 375 (387)
T ss_pred HHHHHHHcCceEEccC-CceEEEEEecc----CCHHHHHHHHHHH
Confidence 8888999999854433 34566665522 4789999999985
No 145
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=96.94 E-value=0.024 Score=55.80 Aligned_cols=166 Identities=11% Similarity=-0.037 Sum_probs=87.5
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCC--------
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILK-------- 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~-------- 71 (329)
..+|+++|+||+|. +|.. ......+.+| ..|.+ | ..-+|.+.+++++.+.+.+. .....
T Consensus 187 ~~~g~~~ivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~~-g-p~G~G~l~~~~~~~~~~~~~-~~~~~~~~~~~~~ 258 (401)
T PRK10874 187 HQAGMVVMVDGAQG-AVHF----PADVQALDIDFYAFSGHKLY-G-PTGIGVLYGKSELLEAMSPW-QGGGKMLTEVSFD 258 (401)
T ss_pred HHcCCEEEEECCcc-cccc----cCCchhcCCCEEEEeccccc-C-CCccEEEEEchHHHhcCCCe-ecCCcceEeeccC
Confidence 45799999999985 3322 1122223467 23944 3 11368888898887655320 00000
Q ss_pred --------CCccchhhhc-c-HHHHHHHHhhHHhH------HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEE
Q psy7882 72 --------TPAHKLKISD-T-VRPHVQIKKSVLER------FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVD 134 (329)
Q Consensus 72 --------~~~hg~T~ag-n-lA~aaala~~ile~------le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIe 134 (329)
.....+|-.- + +++.++++ .+++ .++.+++.+++.++|++ ++.+.-++ ..+.++.+.
T Consensus 259 ~~~~~~~~~~~e~Gt~~~~~~~al~~al~--~l~~~g~~~~~~~~~~l~~~l~~~l~~----~~g~~~~~~~~~~i~~~~ 332 (401)
T PRK10874 259 GFTPQSAPWRFEAGTPNVAGVIGLSAALE--WLADIDINQAESWSRSLATLAEDALAK----LPGFRSFRCQDSSLLAFD 332 (401)
T ss_pred ccCCCCChhhccCCCcCHHHHHHHHHHHH--HHHHhCHHHHHHHHHHHHHHHHHHHhc----CCCEEEeCCCCCcEEEEE
Confidence 0000112121 1 44444443 3322 34455555555555543 33322121 123355555
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC----------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL----------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~----------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.. . + ...+.+.|.++||.+.+... ....+|+.+..-. |++|||.+++++
T Consensus 333 ~~~-~------~---~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~n---t~edid~ll~al 392 (401)
T PRK10874 333 FAG-V------H---HSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYN---TQSDVDALVNAV 392 (401)
T ss_pred ECC-c------C---HHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccC---CHHHHHHHHHHH
Confidence 521 0 1 24577788899999876321 1368999987654 689999999985
No 146
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=96.88 E-value=0.0089 Score=58.29 Aligned_cols=167 Identities=12% Similarity=-0.017 Sum_probs=87.5
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HH--HhhcCCccccceeeechhHHHhhhhhhhc-cCCCCccchh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQ--KDFKGSFWDKLIVHTSTCTFENFIKIKYQ-ILKTPAHKLK 78 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~--KaLgGG~~PigAv~~~~eI~d~~~~~~~~-~~~~~~hg~T 78 (329)
.++|+++|+|++|+ +|.. ..+......| ++ | +.|. ..+|++..+++.. +.+...+ ........+|
T Consensus 163 ~~~g~~vivD~~~~-~g~~----~~~~~~~~~D~~~~s~~K-~~gp-~G~g~l~v~~~~~--~~p~~~g~~~~~~~~~gt 233 (379)
T TIGR03402 163 KERGALFHTDAVQA-VGKI----PIDLKEMNIDMLSLSGHK-LHGP-KGVGALYIRKGTR--FRPLLRGGHQERGRRAGT 233 (379)
T ss_pred HHcCCEEEEECccc-cccc----ccCcccCCCCEEEEcHHH-cCCC-CceEEEEECCCCC--CCCcccCCccCCCcCCCC
Confidence 46799999999997 4321 2222334567 33 9 6553 3578888887642 2110000 0000112233
Q ss_pred hhcc--HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe----e-ceeeEEEeecCCCCCCCCChH
Q psy7882 79 ISDT--VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG----K-GLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 79 ~agn--lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG----~-GLm~gIef~~d~~~~~p~~~~ 148 (329)
.+-. +++.++++- +.+++ .++.+++.++++++|.+ ..+.+ .+-| . .-...+.+.. . +
T Consensus 234 ~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~---~~~~~-~~~~~~~~~~~~~~~~~~~~-~------~-- 300 (379)
T TIGR03402 234 ENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLA---RIPDA-RLNGDPTKRLPNTVNISFEY-I------E-- 300 (379)
T ss_pred ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh---hCCCE-EEeCCCccCCCCEEEEEecC-C------C--
Confidence 3322 444444432 22332 45566666666666653 12321 1111 1 1123333321 1 1
Q ss_pred HHHHHHHHHHHCCceeeccC---C------------------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCKEHGLLLGRGG---L------------------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~e~GVLl~~~G---~------------------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+...|.++||.+.... . ....+|+.|.+.. |++|||++++++
T Consensus 301 -~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~---t~~di~~~~~~l 366 (379)
T TIGR03402 301 -GEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYN---TEEDIDYVLEVL 366 (379)
T ss_pred -HHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCC---CHHHHHHHHHHH
Confidence 2357777788999987521 0 1368999998876 589999999985
No 147
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=96.88 E-value=0.02 Score=55.24 Aligned_cols=159 Identities=10% Similarity=-0.045 Sum_probs=85.0
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
.+|+++|.||+...+.....+. .+.-.+. ++|+++ .|+ =+|.+++.+++.+.+.. .. .++ ..++
T Consensus 155 ~~~~~iI~DE~y~~~~~~~s~~---~~~~~~~vi~~~SfSK~~gl~Gl-RiG~~v~~~~l~~~~~~--~~--~~~-~~~~ 225 (330)
T PRK05664 155 ARGGWLVVDEAFMDNTPQHSLA---ACAHRPGLIVLRSFGKFFGLAGA-RLGFVLAEPALLRALAE--LL--GPW-TVSG 225 (330)
T ss_pred hcCCEEEEECCcccCCCccccc---ccccCCCEEEEeeccccccCCCc-ceEEEEeCHHHHHHHHH--hc--CCC-CCCH
Confidence 4689999999987663211221 1111122 679998 884 89999999998887763 11 001 1111
Q ss_pred hhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 79 ISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 79 ~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
.+. .+..++++. +..++ .+.+.+.-+++.+.|++ ++.. -..|.+.++-+.+. + ...+.+.
T Consensus 226 ~~~-~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~-~~~~~~~f~~~~~~---------~---~~~~~~~ 287 (330)
T PRK05664 226 PTR-WLAQAALADTPWQRRQRERLLAASQRLAALLRR----HGLT-PAGGCALFQWVRTE---------D---AAALHEF 287 (330)
T ss_pred HHH-HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH----CCCc-ccCCcceEEEEecC---------C---HHHHHHH
Confidence 111 233334433 33222 23334444444444443 3321 11222244433321 0 2457788
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|.++||++...+ ..+.+|+.-. . +.++.+++++++
T Consensus 288 l~~~gi~v~~f~-~~~~iRis~~--~---~~~~~~~l~~al 322 (330)
T PRK05664 288 LARRGILTRLFE-QPASLRFGLP--A---DEADWARLDQAL 322 (330)
T ss_pred HHHCCeEEEECC-CCCeEEEECC--C---CHHHHHHHHHHH
Confidence 999999998654 3567887522 1 356778877764
No 148
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=96.87 E-value=0.034 Score=53.86 Aligned_cols=174 Identities=10% Similarity=0.018 Sum_probs=95.1
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC---------
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL--------- 70 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~--------- 70 (329)
.++|+++|+|.+|+ +|... +....+ .+| ..|.|.|+. -+|.+.++++..+.+........
T Consensus 156 ~~~g~~livD~~~~-~g~~~--~~~~~~--~~D~~~~s~~K~l~~p~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (363)
T TIGR02326 156 HRHGKVTIVDAMSS-FGGIP--IDIAEL--HIDYLISSANKCIQGVP-GFGFVIARQAELAACKGNARSLSLDLYDQWRC 229 (363)
T ss_pred HHcCCEEEEEcccc-ccCcc--cchhhc--CccEEEecCccccccCC-cceEEEECHHHHHHhhcCCCceeecHHHHHHH
Confidence 46799999999886 55332 222333 467 249998763 47889999887765431000000
Q ss_pred CCCccc-hhhhcc----HHHHHHHHh--h--HHhH-HHHHHHHHHHHHHHHHHHHHhCCcee--eEEeeceeeEEEeecC
Q psy7882 71 KTPAHK-LKISDT----VRPHVQIKK--S--VLER-FVHTYVVGNFLLTHLSKLREEFAIVG--DVRGKGLMIGVDLVQD 138 (329)
Q Consensus 71 ~~~~hg-~T~agn----lA~aaala~--~--ile~-le~v~~lG~~L~~gL~eL~~~~p~v~--~VRG~GLm~gIef~~d 138 (329)
.....+ ..|+.+ .++.++++. + -+++ .++.+++.++++++|+++ ....+. +.+ .+.+..+.+...
T Consensus 230 ~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~-~~~~~~~~~~~~ 306 (363)
T TIGR02326 230 MEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL--GFEPLLDDEIQ-SPIITSFYSPED 306 (363)
T ss_pred HhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc--CCeeccCcccC-CceEEEEECCCC
Confidence 000000 112223 344444432 1 1222 456677777777777654 122221 122 344555555321
Q ss_pred CCCCCCCChHHHHHHHHHHHHCCceeeccCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 139 KETKVPLNSRHMTHILDSCKEHGLLLGRGGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 139 ~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.. + ....+.+.|.++||.+.+... ..+.+|+.+-.- .+.+|++.+++++
T Consensus 307 ~~----~---~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~---~~~edv~~~l~~l 356 (363)
T TIGR02326 307 PD----Y---RFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGE---VDAADITRLLTAI 356 (363)
T ss_pred CC----C---CHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCC---CCHHHHHHHHHHH
Confidence 10 1 134578889999999987532 247899986322 2589999999985
No 149
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=96.84 E-value=0.038 Score=54.62 Aligned_cols=165 Identities=10% Similarity=-0.024 Sum_probs=86.5
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhc--c-------C
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQ--I-------L 70 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~--~-------~ 70 (329)
..+|+++|+|++|. +|..- +..+ ...+| ..|.+ |. .-+|++.+++++.+.+.+...+ . .
T Consensus 191 ~~~~~~vivD~a~~-~g~~~--~~~~--~~~~D~~~~s~~K~~-gp-~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~ 263 (406)
T PRK09295 191 HQHGAKVLVDGAQA-VMHHP--VDVQ--ALDCDFYVFSGHKLY-GP-TGIGILYVKEALLQEMPPWEGGGSMIATVSLTE 263 (406)
T ss_pred HHcCCEEEEEcccc-cCccc--cCch--hcCCCEEEeehhhcc-CC-CCcEEEEEchHhHhhCCCcccCCceeeeeecCC
Confidence 45799999999985 44331 1122 23457 23943 32 1378888898887654320000 0 0
Q ss_pred --------CCCccchhhhcc--HHHHHHHHhhHHhH------HHHHHHHHHHHHHHHHHHHHhCCceeeEEe---eceee
Q psy7882 71 --------KTPAHKLKISDT--VRPHVQIKKSVLER------FVHTYVVGNFLLTHLSKLREEFAIVGDVRG---KGLMI 131 (329)
Q Consensus 71 --------~~~~hg~T~agn--lA~aaala~~ile~------le~v~~lG~~L~~gL~eL~~~~p~v~~VRG---~GLm~ 131 (329)
..+. .+|.+-. +++.+++ +.+.+ .++.+++.+++.++|.++ +.+ .+-+ .+.++
T Consensus 264 ~~~~~~~~~r~e-~GT~~~~~~~~l~~al--~~~~~~g~~~i~~~~~~l~~~l~~~l~~~----~~~-~~~~~~~~~~iv 335 (406)
T PRK09295 264 GTTWAKAPWRFE-AGTPNTGGIIGLGAAL--DYVSALGLNNIAEYEQNLMHYALSQLESV----PDL-TLYGPQNRLGVI 335 (406)
T ss_pred ccccCCchhhcC-CCCccHHHHHHHHHHH--HHHHHhCHHHHHHHHHHHHHHHHHHHhcC----CCE-EEeCCCCCceEE
Confidence 0001 1122211 3333333 33322 345555666666655543 321 1111 23455
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC----------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 132 GVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL----------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 132 gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~----------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.+... ....+.+.+.++||.++.... .+..+|+.|.+-. |++|||.+++++
T Consensus 336 ~~~~~~~----------~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~yn---t~~did~l~~~l 398 (406)
T PRK09295 336 AFNLGKH----------HAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYN---THEEVDRLVAGL 398 (406)
T ss_pred EEEECCc----------CHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCC---CHHHHHHHHHHH
Confidence 5554311 123466677889998864210 1357999998765 589999999985
No 150
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=96.83 E-value=0.011 Score=58.02 Aligned_cols=162 Identities=10% Similarity=-0.009 Sum_probs=82.2
Q ss_pred ccccceEEehhHhhch--hccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGS--GDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGf--GRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
..+|+++|+||+..-+ |-.|.. ....++ +| ++|+++|. =+|.+++++++.+.+.. ...+.
T Consensus 165 ~~~~~~livDEAy~~~~~~~~~~~-~~~~~~--~divv~s~SKalaG~--r~G~v~~~~~li~~l~~--------~~~~~ 231 (346)
T TIGR03576 165 KSKEAIVLVDDASGARVRRLYGQP-PALDLG--ADLVVTSTDKLMDGP--RGGLLAGRKELVDKIKS--------VGEQF 231 (346)
T ss_pred HHcCCEEEEECCccccccccCCCC-CHHHcC--CcEEEeccchhcccc--ceEEEEeCHHHHHHHHH--------hhcCc
Confidence 3579999999997632 111221 112333 56 57988664 36889999999887764 11122
Q ss_pred hhhcc-HHHHHHHHh-hHHh--H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 78 KISDT-VRPHVQIKK-SVLE--R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 78 T~agn-lA~aaala~-~ile--~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
.|+.+ .+++++++. +.+. . .+..++..+.+.+.++.+ +.. ....| ++-+.+... + -...
T Consensus 232 ~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~~----~~~--~~~~~-f~~~~~~~~-------~--~~~~ 295 (346)
T TIGR03576 232 GLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDKL----NVE--RTPTG-FVIKGVEEE-------K--LIEI 295 (346)
T ss_pred ccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhC----CCC--cCCCe-EEEEeCCCC-------C--HHHH
Confidence 22234 444444333 2221 1 234444444454444432 111 12333 333343210 0 1123
Q ss_pred HHHHHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+...+.++||++.++.. .++.+||+- ...+.++.|.+.+++++
T Consensus 296 ~~~ll~~~gV~v~~~~~f~~~~~~vRis~--~~~~~~~~~~~~~~~al 341 (346)
T TIGR03576 296 GLDLLRNYGIITITAVGMPGASKTLRFDL--AAKDAERIGDDYLVEAV 341 (346)
T ss_pred HHHHHHhCCEEEeCCcccCCCCCeEEEEE--ecChHHhcCHHHHHHHH
Confidence 45667789999998521 246788742 22110112688888775
No 151
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=96.81 E-value=0.027 Score=54.19 Aligned_cols=160 Identities=11% Similarity=0.023 Sum_probs=87.1
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
++++++|.||+...|+.. .... .....+. ++|.++ .|+ -+|.+++++++.+.+.. .. .+..+
T Consensus 173 ~~~~~livDe~y~~~~~~-~~~~--~~~~~~~~i~~~S~SK~~~~~Gl-R~G~~~~~~~~~~~l~~--~~-----~~~~~ 241 (353)
T PRK05387 173 NPDSVVVIDEAYVDFGGE-SAIP--LIDRYPNLLVVQTFSKSRSLAGL-RVGFAIGHPELIEALNR--VK-----NSFNS 241 (353)
T ss_pred CCCcEEEEeCcccccCCc-chHH--HHhhCCCEEEEEehhHhhcchhh-hceeeecCHHHHHHHHH--hh-----ccCCC
Confidence 348999999998766421 1111 1111122 679987 774 78888999988877653 11 01012
Q ss_pred hhcc----HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 79 ISDT----VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 79 ~agn----lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
++.+ .++.+++.. +.+++ .+++.+.-+++.+.|++ ++.. -...-|.++.+.+.. .+ ...
T Consensus 242 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~-~~~~~~~~~~~~~~~-------~~---~~~ 306 (353)
T PRK05387 242 YPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEA----LGFE-VLPSKANFVFARHPS-------HD---AAE 306 (353)
T ss_pred CCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCe-ECCCcCcEEEEECCC-------CC---HHH
Confidence 2333 233334433 44433 34444444555555544 3321 112224444444321 11 345
Q ss_pred HHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.+.|.++||++...+. ..+.+|+.- . +.++++++++++
T Consensus 307 ~~~~l~~~gi~v~~~~~~~~~~~iRis~--~----~~~~~~~~~~~L 347 (353)
T PRK05387 307 LAAKLRERGIIVRHFNKPRIDQFLRITI--G----TDEEMEALVDAL 347 (353)
T ss_pred HHHHHHHCCEEEEECCCCCCCCeEEEEe--C----CHHHHHHHHHHH
Confidence 77888999999976532 246788753 1 468999999875
No 152
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=96.69 E-value=0.031 Score=54.41 Aligned_cols=163 Identities=13% Similarity=0.091 Sum_probs=87.6
Q ss_pred cccceEEehhHhhchhccchhhh-hcccCCcch------HHHhhc-CCccccceeeec-hhHHHhhhhhhhccCCCCccc
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLG-FQCLQICRF------VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA-~e~~GV~PD------i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg 76 (329)
.+++++|.||+...|-..+.... .....-.+. ++|.++ .|+ -+|.+++. +.+.+.+.. .. ...+.
T Consensus 172 ~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RiG~lv~~~~~~~~~~~~--~~---~~~~~ 245 (354)
T PRK06358 172 KRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGL-RLGYGLTSNKNLAEKLLQ--MR---EPWSI 245 (354)
T ss_pred hcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcch-hheeeecCCHHHHHHHHH--hC---CCCcc
Confidence 46899999999987754332111 111111122 679998 884 89988874 567666653 11 01122
Q ss_pred hhhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 77 LKISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 77 ~T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
++++. .++.+++.. +.+++ .+.+++.-+++.+.|+ +++.+.-....|.++-+.+.. ...+.
T Consensus 246 ~~~~q-~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~----~~~~~~~~~~~g~f~~~~~~~------------~~~~~ 308 (354)
T PRK06358 246 NTFAD-LAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLS----EFKGIKVYKPSVNFIFFKLEK------------PIDLR 308 (354)
T ss_pred hHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHh----cCCCcEEcCCcceEEEEEcCc------------hHHHH
Confidence 22211 233334433 33333 2333333344444443 333322223445555555421 14588
Q ss_pred HHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.|.++||++.++.. .++.+|+. +. +.++.+.+++++
T Consensus 309 ~~l~~~gI~v~~~~~f~~~~~~~iRls----~~--~~~~~~~l~~~l 349 (354)
T PRK06358 309 KELLKKGILIRSCSNYRGLDENYYRVA----VK--SREDNKKLLKAL 349 (354)
T ss_pred HHHHHCCeEEEECCCCCCCCCCEEEEE----eC--CHHHHHHHHHHH
Confidence 888999999998632 23567765 22 578888888874
No 153
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=96.68 E-value=0.018 Score=58.36 Aligned_cols=175 Identities=12% Similarity=0.010 Sum_probs=86.8
Q ss_pred cccceEEehhHhhchhccch-hhhhcccCCcchH-----HHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGT-YLGFQCLQICRFV-----QKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~-~fA~e~~GV~PDi-----~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
.+|++|++|++|+ +|..+. .+..... ..|+ .|.|.|-. -|++++++++.+.+.........+..+|+.-
T Consensus 208 ~~ga~l~vDaaq~-~G~i~~~~~~~~~~--~~D~l~~S~hK~l~GP~--Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~ 282 (452)
T PTZ00094 208 SVGAYLMADIAHT-SGLVAAGVLPSPFP--YADVVTTTTHKSLRGPR--SGLIFYRKKVKPDIENKINEAVFPGLQGGPH 282 (452)
T ss_pred HcCCEEEEeccch-hccccCCCCCCCCC--CCcEEEcCCccCCCCCC--ceEEEEecccchHHHHhhccccCCCCCCCch
Confidence 5699999999998 555532 1111111 2572 39887632 2555566655433221000000011222111
Q ss_pred hcc-HHHHHHHHh-h--HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882 80 SDT-VRPHVQIKK-S--VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMTHI 153 (329)
Q Consensus 80 agn-lA~aaala~-~--ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~~~ 153 (329)
... .+++++++. . -.++ .+++.++.++|.++|++. ..+.... +. --+.-+.|.... . ....+
T Consensus 283 ~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~--g~~v~~~--~~~~~~~~v~~~~~~-----~---~~~~~ 350 (452)
T PTZ00094 283 NHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR--GYDLVTG--GTDNHLVLVDLRPFG-----I---TGSKM 350 (452)
T ss_pred HHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC--CcEEecC--CCCCceEeecCCcCC-----C---CHHHH
Confidence 111 333333332 1 1112 456777778887777652 1212110 10 112333343211 0 12346
Q ss_pred HHHHHHCCceeeccC-------CCCCEEEEeCccccC-cCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGG-------LSGNTLTALQPKLLN-YWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G-------~~~nvIrl~PPL~It-~~t~eeId~~l~~~ 197 (329)
...|.++||++...+ ..+..||+.|++..+ -++++|++++++++
T Consensus 351 ~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l 402 (452)
T PTZ00094 351 EKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFL 402 (452)
T ss_pred HHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHH
Confidence 666667899995321 124689999988753 33489999999975
No 154
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=96.66 E-value=0.014 Score=56.76 Aligned_cols=176 Identities=9% Similarity=-0.029 Sum_probs=86.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhc--cCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQ--ILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~--~~~~~~hg~ 77 (329)
..+|+++|+||++. +|... +....+|+ | +.|.+++|. ++|.+++++++.+.+...... .......++
T Consensus 166 ~~~~~~vivD~a~~-~g~~~--~~~~~~~~--d~~~~s~~K~l~~~~-~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 239 (361)
T cd06452 166 HEYGVPLLLNGAYT-VGRMP--VSGKELGA--DFIVGSGHKSMAASA-PIGVLATTEEWADIVFRTSQMFKIKEVELLGC 239 (361)
T ss_pred HHcCCeEEEECCcc-cCCcC--CCHHHcCC--CEEEecCCccccCCC-CeEEEEECHHHHHHHhccccccccceeeeecc
Confidence 45799999999986 33211 22223332 5 459998764 889999999888876431000 000011222
Q ss_pred hhhcc--HHHHHHHHh--hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEE----eeceeeEEEeecCCCCCCCCChHH
Q psy7882 78 KISDT--VRPHVQIKK--SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVR----GKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 78 T~agn--lA~aaala~--~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VR----G~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
|+... .+..+++.. +.++++.+..+..++|.+.|+++ +.+ .+- +..-+..++.. .-..........
T Consensus 240 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l----~g~-~v~~~~~~~~n~~~~~~~-~~~~~~~~~~~~ 313 (361)
T cd06452 240 TLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKI----EGI-KQLGEKPKNHDLMFFETP-SFDEIAKKHKRR 313 (361)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCe-EEECCCCCCCceEEEEcC-Ccchhhhhcccc
Confidence 22111 222223321 22222222223335566555543 211 111 12223333331 000000000011
Q ss_pred HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|.++||+....+ .++.+|+..+- ++++|++.+++++
T Consensus 314 ~~~~~~~L~~~gI~~~~~~-~~~~~ri~~~g----~~~e~~~~l~~al 356 (361)
T cd06452 314 GYFLYSELKKRGIHGIKPG-LTRYFKLSTYG----LTWEQVEYVVDAF 356 (361)
T ss_pred chhHHHHHHHcCceEEcCC-CceEEEEEecC----CCHHHHHHHHHHH
Confidence 2358889999999975544 34567765422 4789999999975
No 155
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=96.66 E-value=0.051 Score=52.61 Aligned_cols=156 Identities=10% Similarity=0.088 Sum_probs=86.9
Q ss_pred ccceEEehhHhhchhccchhhh-hcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLG-FQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA-~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
+++++|.||+..-|. ...+.. .+.+ +. ++|.++ .|+ =+|.+++++++.+.+.. .. .....++
T Consensus 166 ~~~~ii~DE~Y~~f~-~~~~~~~~~~~---~~vi~~~S~SK~~~l~Gl-RvG~~v~~~~~~~~l~~--~~---~~~~~~~ 235 (335)
T PRK14808 166 TGAFVALDEAYYEFH-GESYVDLLKKY---ENLAVIRTFSKAFSLAAQ-RIGYVVSSEKFIDAYNR--VR---LPFNVSY 235 (335)
T ss_pred cCCEEEEECchhhhc-CCchHHHHHhC---CCEEEEEechhhccCccc-ceEEEEeCHHHHHHHHH--hc---CCCCCCH
Confidence 689999999998773 111111 1111 12 689999 774 88999999999888753 11 0111122
Q ss_pred hhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 79 ISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 79 ~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
.+. .++.+++.. +.+++ .+...+.-+++.+.|+ +++. .-....|.++-+.+... . ...+.+.
T Consensus 236 ~~q-~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~----~~g~-~~~~~~g~f~~~~l~~~---------~-~~~~~~~ 299 (335)
T PRK14808 236 VSQ-MFAKVALDHREIFEERTKFIVEERERMKSALR----EMGY-RITDSRGNFVFIFMEKE---------E-KERLLEH 299 (335)
T ss_pred HHH-HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHH----HCCC-EECCCCCeEEEEeCCCc---------c-HHHHHHH
Confidence 221 223333433 33322 2222222233333333 3342 22234677776666421 1 2457888
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|.++||+++.. .+.+|+. +. +.++.+++++++
T Consensus 300 l~~~Gi~V~~~---~~~~Ris----i~--~~~~~~~~~~~l 331 (335)
T PRK14808 300 LRAKNIAVRSF---REGVRIT----IG--KREENDMILKEL 331 (335)
T ss_pred HHHCCeEEEEC---CCCeEEe----cC--CHHHHHHHHHHH
Confidence 99999999864 3557765 22 578889998875
No 156
>PRK07908 hypothetical protein; Provisional
Probab=96.64 E-value=0.035 Score=53.66 Aligned_cols=157 Identities=8% Similarity=-0.048 Sum_probs=82.8
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcc-h------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICR-F------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~P-D------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
++.++|.||++.-|- .|..-.... ..+ + ++|.++ .|. -+|.+++++++.+.+.. .. .....++
T Consensus 167 ~~~~iIvDe~y~~~~-~~~~~~l~~--~~~~~~i~i~S~SK~~~l~Gl-RiG~~~~~~~~~~~~~~--~~---~~~~~~~ 237 (349)
T PRK07908 167 PGRILVVDEAFADAV-PGEPESLAG--DDLPGVLVLRSLTKTWSLAGL-RVGYALGAPDVLARLTR--GR---AHWPVGT 237 (349)
T ss_pred cCCEEEEECcchhhc-cCCcccccc--ccCCCEEEEeecccccCCccc-eeeeeecCHHHHHHHHh--cC---CCCCccH
Confidence 467888899987652 232111111 122 3 579987 774 78999999988887763 11 0111111
Q ss_pred hhccHHHHHHH-Hh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 79 ISDTVRPHVQI-KK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 79 ~agnlA~aaal-a~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
. +.+++.++ .. +.+++ .++.++.-+++.+.|++ ++ +.-.. .-|.++.+.+.. ...
T Consensus 238 ~--~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~-~~~~~p~~g~~~~~~~~~------------~~~ 298 (349)
T PRK07908 238 L--QLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRA----VG-ARVVDPAAAPFVLVRVPD------------AEL 298 (349)
T ss_pred H--HHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHh----CC-cEeccCCCceEEEEECCc------------HHH
Confidence 1 12222222 21 12221 22233333333333333 32 11111 236666665531 235
Q ss_pred HHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+...|.++||++.++.. ..+.+|+... +.+|++.+++++
T Consensus 299 ~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~------~~~~~~~l~~al 341 (349)
T PRK07908 299 LRKRLRERGIAVRRGDTFPGLDPDYLRLAVR------PRAEVPVLVQAL 341 (349)
T ss_pred HHHHHHhCCEEEEECCCCCCCCCCeEEEEeC------CCccHHHHHHHH
Confidence 77788899999987532 2468888652 457888888875
No 157
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=96.62 E-value=0.033 Score=54.13 Aligned_cols=160 Identities=11% Similarity=0.009 Sum_probs=85.4
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+++++|.||+..-|...... .......|. ++|.++ .|+ =+|.+++++++.+.+.. .. . ..+.++.
T Consensus 177 ~~~~vivDeay~~~~~~~s~--~~~~~~~~~~iv~~S~SK~~~l~Gl-RlG~~i~~~~~~~~l~~--~~--~-~~~~~~~ 248 (354)
T PRK04635 177 PDAIVVVDEAYIEFCPEYSV--ADLLASYPNLVVLRTLSKAFALAGA-RCGFTLANEELIEILMR--VI--A-PYPVPLP 248 (354)
T ss_pred CCcEEEEeCchHhhccCcch--HHHHhhCCCEEEEechHHHhhhhHH-HHhhhhCCHHHHHHHHh--hc--C-CCCCCHH
Confidence 46899999998877421111 111111122 679986 663 67888899988887653 11 0 1111111
Q ss_pred hccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 80 SDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 80 agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
.. .+..+++.. +.+++ .+++++..+++.+.|++ ++.+.-....|.++-+.+.. ...+.+
T Consensus 249 ~~-~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~~~g~f~~~~~~~------------~~~~~~ 311 (354)
T PRK04635 249 VS-EIATQALSEAGLARMKFQVLDLNAQGARLQAALSM----YGGAKVLEGNGNYVLAKFDD------------VDAVFK 311 (354)
T ss_pred HH-HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHh----CCCceECCCCCcEEEEECCC------------HHHHHH
Confidence 11 122233322 11222 23344444455555543 34222223346555555521 234677
Q ss_pred HHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|.++||.++.++. .++.+|+.- . +.+|++.+++++
T Consensus 312 ~l~~~gv~v~~~~~~~~~~~lRis~----~--~~e~~~~l~~al 349 (354)
T PRK04635 312 ALWDAGIVARAYKDPRLANCIRFSF----S--NRAETDKLIGLI 349 (354)
T ss_pred HHHHCCEEEEECCCCCCCCeEEEEe----C--CHHHHHHHHHHH
Confidence 88899999986532 246788872 2 589999999985
No 158
>PRK07568 aspartate aminotransferase; Provisional
Probab=96.58 E-value=0.064 Score=52.58 Aligned_cols=167 Identities=11% Similarity=-0.001 Sum_probs=88.3
Q ss_pred cccceEEehhHhhchhccchh-hhhccc-CCcch------HHHhhcC-Cccccceeeec-hhHHHhhhhhhhccCCCCcc
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTY-LGFQCL-QICRF------VQKDFKG-SFWDKLIVHTS-TCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~-fA~e~~-GV~PD------i~KaLgG-G~~PigAv~~~-~eI~d~~~~~~~~~~~~~~h 75 (329)
.+|+++|.||+..+|...|.. -....+ +..+. ++|.++. | +.+|.+++. +++.+.+.. ... ...+
T Consensus 193 ~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G-~R~G~~~~~~~~~~~~~~~--~~~--~~~~ 267 (397)
T PRK07568 193 KHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACG-ARIGCLISKNKELIAAAMK--LCQ--ARLS 267 (397)
T ss_pred HCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCC-cceEEEecCCHHHHHHHHH--Hhh--ccCC
Confidence 568999999999988655531 111111 22222 5799984 7 489988874 678776543 110 0112
Q ss_pred chhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHH
Q psy7882 76 KLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 76 g~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
.++++ ..+++.++.. +.+++ .+..++.-+.+.+.|++ ++.+.-.... |+++-+.+... + ..
T Consensus 268 ~s~~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~p~g~~~~~~~l~~~-------~---~~ 332 (397)
T PRK07568 268 PPTLE-QIGAAALLDTPESYFDEVREEYKKRRDILYEELNK----IPGVVCEKPKGAFYIIAKLPVD-------D---AE 332 (397)
T ss_pred CCcHH-HHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhc----CCCceecCCCcceEEEEecCCC-------C---HH
Confidence 22221 1444555543 23332 23344444445554443 3333222233 44445565321 0 22
Q ss_pred HHHHHHHH------CCceeeccCC-------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDSCKE------HGLLLGRGGL-------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~e------~GVLl~~~G~-------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.+.+.+ +||++.+... ..+.+|+. +.. +++++++.++.+
T Consensus 333 ~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls--~~~---~~~~~~~~~~~l 386 (397)
T PRK07568 333 DFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIA--YVL---NEEDLKRAMEIL 386 (397)
T ss_pred HHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEE--EeC---CHHHHHHHHHHH
Confidence 35555544 6999987421 13578886 333 468899988874
No 159
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=96.56 E-value=0.059 Score=53.66 Aligned_cols=170 Identities=12% Similarity=0.008 Sum_probs=87.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC---C-----
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL---K----- 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~---~----- 71 (329)
..+|+++|+|++|. +|.. ........+| ..| +.|. --+|++.+++++.+.+.+...+.. .
T Consensus 200 ~~~g~~vivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K-~~gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~ 272 (424)
T PLN02855 200 HAVGAKVLVDACQS-VPHM----PVDVQTLGADFLVASSHK-MCGP-TGIGFLWGKSDLLESMPPFLGGGEMISDVFLDH 272 (424)
T ss_pred HHcCCEEEEEhhhh-cCCc----CCCchhcCCCEEEeeccc-ccCC-CccEEEEEchhhhhcCCCEecCCCceeeeecCc
Confidence 35689999999995 4332 1121123368 249 4432 137888889888765532000000 0
Q ss_pred ------C-Cccchhhhcc--HHHHHHHHhhHHhH------HHHHHHHHHHHHHHHHHHHHhCCceee----EEeeceeeE
Q psy7882 72 ------T-PAHKLKISDT--VRPHVQIKKSVLER------FVHTYVVGNFLLTHLSKLREEFAIVGD----VRGKGLMIG 132 (329)
Q Consensus 72 ------~-~~hg~T~agn--lA~aaala~~ile~------le~v~~lG~~L~~gL~eL~~~~p~v~~----VRG~GLm~g 132 (329)
. ..-.+|-+-. .++.+++ +.+.+ .++..++.++|.+.|+++. ....... ...++.+..
T Consensus 273 ~~~~~~~~r~e~GT~~~~~~~~l~~al--~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~~r~~~v~ 349 (424)
T PLN02855 273 STYAPPPSRFEAGTPAIGEAIGLGAAI--DYLSEIGMDRIHEYEVELGTYLYEKLSSVP-GVRIYGPKPSEGVGRAALCA 349 (424)
T ss_pred cccCCChhhccCCChHHHHHHHHHHHH--HHHHHhCHHHHHHHHHHHHHHHHHHHhcCC-CEEEeCCCcccccCcccEEE
Confidence 0 0001121111 2233333 33322 3455566666666555431 0011111 112244666
Q ss_pred EEeecCCCCCCCCChHHHHHHHHHHHHC-CceeeccC----------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 133 VDLVQDKETKVPLNSRHMTHILDSCKEH-GLLLGRGG----------LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 133 Ief~~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G----------~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.+.. . ....+.+.|.++ ||.++... -....+|+.+.+.. |++||+.+++++
T Consensus 350 ~~~~~-~---------~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~yn---t~~di~~l~~~l 412 (424)
T PLN02855 350 FNVEG-I---------HPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYN---TKEEVDAFIHAL 412 (424)
T ss_pred EEECC-c---------CHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCC---CHHHHHHHHHHH
Confidence 66531 0 123577778777 99887421 01357999998876 589999999985
No 160
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=96.54 E-value=0.052 Score=53.48 Aligned_cols=161 Identities=7% Similarity=-0.008 Sum_probs=88.6
Q ss_pred ceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 9 CGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 9 iLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
+++|.||+...|...+.... ...-.+. ++|.++ .|+ -+|.+++.+++.+.+.. .. .....++.+.
T Consensus 205 ~~vi~DeaY~~~~~~~~~~~--~~~~~~~viv~~SfSK~~glaGl-RiGy~~~~~~~i~~l~~--~~---~~~~~~~~~q 276 (380)
T PLN03026 205 ILVVLDEAYIEFSTQESRMK--WVKKYDNLIVLRTFSKRAGLAGL-RVGYGAFPLSIIEYLWR--AK---QPYNVSVAAE 276 (380)
T ss_pred CEEEEECcchhhcCCcchHH--HHHhCCCEEEEecchHhhcCccc-cceeeecCHHHHHHHHH--hc---CCCCCCHHHH
Confidence 78999999987743222111 1110111 679997 774 88999999988887653 11 0111111111
Q ss_pred cHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHH
Q psy7882 82 TVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKE 159 (329)
Q Consensus 82 nlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e 159 (329)
.++.+++.. +.+++ .+.+.+.-+++.+.|+++ +.+.-...-|.++-+.+..+ . -...+.+.|.+
T Consensus 277 -~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~p~~~~f~~~~~~~~------~---~~~~~~~~l~~ 342 (380)
T PLN03026 277 -VAACAALSNPKYLEDVKNALVEERERLFGLLKEV----PFLEPYPSDANFILCRVTSG------R---DAKKLKEDLAK 342 (380)
T ss_pred -HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC----CCCeECCCCCeEEEEECCCC------C---CHHHHHHHHHH
Confidence 334444544 44443 334444445555555543 32211223455666655321 0 13457888889
Q ss_pred CCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 160 HGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 160 ~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+||+++++.. ..+.+||.-. +.++.+.+++++
T Consensus 343 ~gI~v~~~~~~~~~~~lRis~~------~~~~~~~l~~al 376 (380)
T PLN03026 343 MGVMVRHYNSKELKGYIRVSVG------KPEHTDALMEAL 376 (380)
T ss_pred CCeEEEECCCCCCCCEEEEecC------CHHHHHHHHHHH
Confidence 9999987532 2457887532 467888888774
No 161
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=96.49 E-value=0.067 Score=52.00 Aligned_cols=167 Identities=9% Similarity=0.007 Sum_probs=86.1
Q ss_pred ccccceEEehhHhhchhccchhhh-hcc--cCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLG-FQC--LQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTP 73 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA-~e~--~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~ 73 (329)
..+|+++|.||+...+.-.|.... .+. .+...+ ++|.++ .| +=+|.+++++++.+.+...... ..
T Consensus 178 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-lRiG~i~~~~~~~~~~~~~~~~---~~ 253 (364)
T PRK07865 178 RERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAG-YRAGFVAGDPALVAELLEVRKH---AG 253 (364)
T ss_pred HHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCc-eeeEEEecCHHHHHHHHHHHHh---cC
Confidence 357999999999987754332211 111 111223 679984 55 3678888999988776530000 01
Q ss_pred ccchhhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHH
Q psy7882 74 AHKLKISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHM 150 (329)
Q Consensus 74 ~hg~T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~ 150 (329)
.+.++... .++++++.. +.+++ ....++.-+.+.+.|+ +++.. -.... |+++-+.+.. + .
T Consensus 254 ~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~g~~-~~~~~~~~~~~~~~~~--------~---~ 316 (364)
T PRK07865 254 MMVPAPVQ-AAMVAALGDDAHVREQRERYARRRAVLRPALE----AAGFR-VDHSEAGLYLWATRGE--------D---C 316 (364)
T ss_pred CCcCHHHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH----HcCCc-ccCCCccEEEEEeCCC--------C---H
Confidence 12222211 233344444 33322 2233333333444443 34421 11232 4444444421 0 2
Q ss_pred HHHHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+.+.|.++||++.++.. ..+.+|+.- .. +++++++.++..
T Consensus 317 ~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~--~~---~~~~~~~~~~~l 362 (364)
T PRK07865 317 WDTVAWLAERGILVAPGDFYGPAGAQHVRVAL--TA---TDERIAAAVERL 362 (364)
T ss_pred HHHHHHHHHCCEEEeCccccCcCCCCEEEEEe--cC---CHHHHHHHHHHh
Confidence 3467788899999987421 245777752 22 478999998764
No 162
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=96.47 E-value=0.059 Score=53.84 Aligned_cols=163 Identities=12% Similarity=-0.008 Sum_probs=86.5
Q ss_pred cceEEehhHhhchhccchhhhhcccCCcch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
|+++|.||+..-|...+. .. ......+ ++|.++.|+ -+|.+++.+++.+.+... ... ...+.++++
T Consensus 246 ~~~ii~De~Y~~~~~~~~-~~--~~~~~~~~vi~~~SfSK~~~~Gl-RiG~~i~~~~~~~~~~~~-~~~--~~~~~s~~~ 318 (431)
T PRK15481 246 QVLVIIDDHFALLSSSPY-HS--VIPQTTQRWALIRSVSKALGPDL-RLAFVASDSATSARLRLR-LNS--GTQWVSHLL 318 (431)
T ss_pred CceEEecCchhhhccCCC-CC--CCcCCCCCEEEEeeeccccCCCc-eeEEEeCCHHHHHHHHHH-Hhc--cccCCCHHH
Confidence 899999999887732221 01 0111122 579999885 899999999888877530 000 001112211
Q ss_pred ccHHHHHHHHh-hH---HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DTVRPHVQIKK-SV---LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gnlA~aaala~-~i---le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
. .++++++.. +. +++ .+..++.-+.+.+.|+ +++.....-.-|+++-+.+..+ ...+..
T Consensus 319 q-~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~----~~~~~~~~p~gg~f~~~~l~~~-----------~~~~~~ 382 (431)
T PRK15481 319 Q-DLVYACLTDPEYQARLAQARLFYAQRRQKLARALQ----QYGIAIPSPGDGLNLWLPLDTD-----------SQATAL 382 (431)
T ss_pred H-HHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHH----HcCCccccCCCeEEEEEECCCC-----------HHHHHH
Confidence 1 344445544 32 111 2223333333333333 2332111223467777766321 234777
Q ss_pred HHHHCCceeeccCCC-----CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLS-----GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~-----~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|.++||.+.+.... ++.+|+.- ...++++++++++.+
T Consensus 383 ~l~~~gV~v~pg~~f~~~~~~~~iRis~----~~~~~~~i~~~~~~l 425 (431)
T PRK15481 383 TLAKSGWLVREGEAFGVSAPSHGLRITL----STLNDAEINRLAADL 425 (431)
T ss_pred HHHHCCcEEecCCccccCCCCCeEEEEc----CCCChHHHHHHHHHH
Confidence 788999999884211 24677753 222578899888764
No 163
>PRK10534 L-threonine aldolase; Provisional
Probab=96.47 E-value=0.027 Score=53.82 Aligned_cols=158 Identities=8% Similarity=0.006 Sum_probs=80.9
Q ss_pred cccceEEehhHhhchhcc---chhhhhcccCCcch-----HHHhhcCCccccc-eeeechhHHHhhhhhhhccCCCCccc
Q psy7882 6 YRDCGVVVSAVDFGSGDN---GTYLGFQCLQICRF-----VQKDFKGSFWDKL-IVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRT---G~~fA~e~~GV~PD-----i~KaLgGG~~Pig-Av~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
.|++++|+||... |+.. |.... ...-.+| ++|+.+ +|+| .+++++++.+.+.. .. ...+
T Consensus 158 ~~~~~lvvDEA~~-~~~~~~~~~~~~--~~~~~~~~~~~s~SK~~~---~~~G~~~~~~~~~i~~~~~--~~----~~~~ 225 (333)
T PRK10534 158 ERNLALHVDGARI-FNAVVAYGCELK--EITQYCDSFTICLSKGLG---TPVGSLLVGNRDYIKRARR--WR----KMTG 225 (333)
T ss_pred HcCCeEEeeHHHH-HHHHHHcCCCHH--HHHhcCCEEEEEeEcCCC---CcccceEEcCHHHHHHHHH--HH----HHhC
Confidence 4689999999755 4322 11110 0000123 679654 2678 47788998887653 11 0011
Q ss_pred hhhhcc-HHHHHHHHh-hH-HhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882 77 LKISDT-VRPHVQIKK-SV-LERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI 153 (329)
Q Consensus 77 ~T~agn-lA~aaala~-~i-le~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~ 153 (329)
..++.+ .+.+++++. +- .+.+++..+.-++|.+.|+++ +. .-....+-++-+.+.. .....+
T Consensus 226 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l~~~L~~~----g~-~~~~~~~nfv~~~~~~----------~~~~~~ 290 (333)
T PRK10534 226 GGMRQAGILAAAGLYALKHNVARLQEDHDNAAWLAEQLREA----GA-DVMRQDTNMLFVRVGE----------EQAAAL 290 (333)
T ss_pred CchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC----CC-ccCCCCceEEEEECCc----------hhHHHH
Confidence 112222 223333333 21 111333333334566666553 22 1111235555555431 113457
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.|.++||++.++ ..+|+.-.+- +|.+|+++++++.
T Consensus 291 ~~~l~~~gi~v~~~----~~~rl~~~~r---~t~e~~~~~~~~l 327 (333)
T PRK10534 291 GEYMRERNVLINAS----PIVRLVTHLD---VSREQLAEVVAHW 327 (333)
T ss_pred HHHHHHcCeeecCC----ceEEEEEEeC---CCHHHHHHHHHHH
Confidence 78899999999863 3466654322 3689999999975
No 164
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=96.45 E-value=0.035 Score=53.95 Aligned_cols=159 Identities=12% Similarity=0.080 Sum_probs=83.6
Q ss_pred cceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
++++|+||+..-|.....+ .....-.|. ++|++| .| +-+|.+++++++.+.+.. .. ...+.++.+
T Consensus 177 ~~~vivDEay~~f~~~~s~--~~~~~~~~n~iv~rSfSK~~glaG-lRiGy~i~~~~~i~~l~~--~~---~~~~v~~~~ 248 (351)
T PRK01688 177 KAIVVADEAYIEFCPQASL--AGWLAEYPHLVILRTLSKAFALAG-LRCGFTLANEEVINLLLK--VI---APYPLSTPV 248 (351)
T ss_pred CcEEEEECchhhcCCCCCh--HHHHhhCCCEEEEecchHhhcCHH-HHHhHHhCCHHHHHHHHh--cc---CCCCCCHHH
Confidence 5789999998777421111 111111233 579987 66 367888899999887753 11 011122221
Q ss_pred ccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
...+ .++++. +.+++ .+.+.+.-+++.+.|++ .+.+..+ ...|.++-+.+.. ...+.+
T Consensus 249 ~~~a-~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~ps~~nfi~~~~~~------------~~~l~~ 311 (351)
T PRK01688 249 ADIA-AQALSPQGIAAMRERVAEINANRQWLIAALKE----IPCVEQVFDSETNYILARFTA------------SSAVFK 311 (351)
T ss_pred HHHH-HHHHhcchHHHHHHHHHHHHHHHHHHHHHHHh----CCCCCeECCCCCcEEEEEcCC------------HHHHHH
Confidence 1122 223332 12222 23333333444444433 3322212 2234454454421 245788
Q ss_pred HHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|.++||+++.++. ..+.+|+.-. +.+|.+.+++++
T Consensus 312 ~L~~~gi~vr~~~~~~~~~~~iRis~~------~~~e~~~l~~al 350 (351)
T PRK01688 312 SLWDQGIILRDQNKQPGLSNCLRITIG------TREECQRVIDAL 350 (351)
T ss_pred HHHHCCeEEEECCCcCCCCCeEEEeCC------CHHHHHHHHHhh
Confidence 89999999987532 2456777532 579999998764
No 165
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=96.44 E-value=0.11 Score=50.53 Aligned_cols=161 Identities=13% Similarity=0.071 Sum_probs=89.1
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCccccceeeechhHHHhhhhhhhccC----------
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL---------- 70 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~---------- 70 (329)
.+|+++|+|=+|. +|.. -.-.+.+ .+|+ -| +.|+. -+|++.++++..+.+.+...+..
T Consensus 167 ~~~~~~~vD~~~~-~g~~--~id~~~~--~~D~~~~s~~K-l~gp~-G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~ 239 (371)
T PF00266_consen 167 EYGALLVVDAAQS-AGCV--PIDLDEL--GADFLVFSSHK-LGGPP-GLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEY 239 (371)
T ss_dssp HTTSEEEEE-TTT-TTTS--S--TTTT--TESEEEEESTS-TTSSS-TEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHH
T ss_pred ccCCceeEechhc-cccc--ccccccc--ccceeeecccc-cCCCC-chhhheehhhhhhccccccccccccccccchhc
Confidence 4699999999887 5443 1233333 4682 39 88873 58999999998887743100000
Q ss_pred ----CC-CccchhhhccHHHHHHHHh--hHHhH--HH----HHHHHHHHHHHHHHHHHHhCCcee-----eEEeeceeeE
Q psy7882 71 ----KT-PAHKLKISDTVRPHVQIKK--SVLER--FV----HTYVVGNFLLTHLSKLREEFAIVG-----DVRGKGLMIG 132 (329)
Q Consensus 71 ----~~-~~hg~T~agnlA~aaala~--~ile~--le----~v~~lG~~L~~gL~eL~~~~p~v~-----~VRG~GLm~g 132 (329)
.. ...++|. ++....++.. +.+++ ++ +..++.+++.+.|.+ .+.+. +-...+.+..
T Consensus 240 ~~~~~~~~~~~GT~--~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~----~~~~~~~~~~~~~~~~~i~~ 313 (371)
T PF00266_consen 240 GLADDARRFEGGTP--NVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEE----LPGIEVLGPDDEPRRPSIVS 313 (371)
T ss_dssp CHHSTTTGSSSSS----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTTEEESSSSCGGBGTTEEE
T ss_pred ccccccccccccce--eeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhc----CCceeEeeecccccccceEE
Confidence 00 0111222 2222222222 44433 44 445555555555544 34321 1233567778
Q ss_pred EEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC-C----------CCEEEEeCccccCcCCHHHHHHH
Q psy7882 133 VDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL-S----------GNTLTALQPKLLNYWTDFVGTPC 193 (329)
Q Consensus 133 Ief~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~-~----------~nvIrl~PPL~It~~t~eeId~~ 193 (329)
+.+.. . -...+...|.++||.+.. |. . +.++|+.|.+.. |++|||++
T Consensus 314 ~~~~~-~---------~~~~~~~~L~~~~I~~~~-G~~~~~~~~~~~~~~~~iRvS~~~~n---t~~dv~~l 371 (371)
T PF00266_consen 314 FNLPG-S---------DADDVVKYLEERGIAVST-GSACAGPSLDILGMGGVIRVSLHYYN---TEEDVDRL 371 (371)
T ss_dssp EEETT-S---------SHHHHHHHHHHHTEEEEE-STTTCHHHHHHHHTTTEEEEE-GTTS---SHHHHHHH
T ss_pred EeecC-C---------CHHHHHHHHhhcCEEEec-cCcccHHHHHHhCCCCEEEEeccCCC---CHHHHhhC
Confidence 77732 1 135688888888999887 32 2 279999988877 58999874
No 166
>PRK06348 aspartate aminotransferase; Provisional
Probab=96.40 E-value=0.068 Score=52.48 Aligned_cols=170 Identities=10% Similarity=-0.015 Sum_probs=87.0
Q ss_pred ccccceEEehhHhhchhccchhhhhccc-CCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCL-QICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~-GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
.++|+++|.||+...|--.+..-....+ +. +| ++|.++ .|+ =+|.+++++++.+.+.. ... ....+
T Consensus 192 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~l~Gl-RiG~~v~~~~~~~~~~~--~~~-~~~~~ 266 (384)
T PRK06348 192 IEYDLFIISDEVYDGFSFYEDFVPMATLAGM-PERTITFGSFSKDFAMTGW-RIGYVIAPDYIIETAKI--INE-GICFS 266 (384)
T ss_pred HHCCeEEEEecccccceeCCCccchhhcCCC-cCcEEEEecchhccCCccc-cceeeecCHHHHHHHHH--HHH-hccCC
Confidence 3579999999999887422221111111 11 33 679998 774 88999999988776653 100 00112
Q ss_pred chhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChHHHH
Q psy7882 76 KLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 76 g~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
+++.+. .+++.++.. +.+++ .+..++.-+++.+.|++ .+.+.-... -|+++-+.+.... ++ ..
T Consensus 267 ~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~----~~~~~~~~p~gg~~~~~~~~~~~-----~~---~~ 333 (384)
T PRK06348 267 APTISQ-RAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIES----IPNLSLHPPKGSIYAFINIKKTG-----LS---SV 333 (384)
T ss_pred CCHHHH-HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc----CCCceeccCCeeEEEEEecccCC-----CC---HH
Confidence 222211 222333333 22222 22233333444444433 232211122 2555566653211 11 23
Q ss_pred HHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+...|+ +.||.+.++.. ..+.+|+.- .. +++++++.++.+
T Consensus 334 ~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~---~~~~l~~al~~l 379 (384)
T PRK06348 334 EFCEKLLKEAHVLVIPGKAFGESGEGYIRLAC--TV---GIEVLEEAFNRI 379 (384)
T ss_pred HHHHHHHHhCCEEEcCchhhccCCCCeEEEEe--cC---CHHHHHHHHHHH
Confidence 4677776 57999987431 246788863 22 578888888764
No 167
>PRK06290 aspartate aminotransferase; Provisional
Probab=96.36 E-value=0.04 Score=55.05 Aligned_cols=177 Identities=10% Similarity=0.011 Sum_probs=90.9
Q ss_pred ccccceEEehhHhhchhccchhhhh-cccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGF-QCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~-e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..|++++|.||+...+--.+..-.+ +..+ .+| ++|.++ .| +=+|.+++.+++++.+.. .. ...+
T Consensus 209 ~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~-~~~~~I~i~SfSK~~g~~G-lRiG~ii~~~~l~~~l~~--~~---~~~~ 281 (410)
T PRK06290 209 KENNIIVVQDAAYAALTFDGKPLSFLSVPG-AKEVGVEIHSLSKAYNMTG-WRLAFVVGNELIVKAFAT--VK---DNND 281 (410)
T ss_pred HHcCeEEEEecchhhceeCCCCcChhcCCC-ccccEEEEeechhhcCCch-hheEeEEeCHHHHHHHHH--HH---hccc
Confidence 3579999999999876322211111 1111 122 679995 66 378989999999887753 11 0111
Q ss_pred chhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHH
Q psy7882 76 KLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 76 g~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
.++..-. .++..+++. +.+++ .++.++.-+.+.+.|++ ++.. -.... |+++-+.+...... .....-..
T Consensus 282 ~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~-~~~p~g~f~l~v~lp~~~~~--~~~~~~~~ 354 (410)
T PRK06290 282 SGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNE----VGFK-AEMPGGTFYLYVKAPKGTKS--GIKFENAE 354 (410)
T ss_pred cCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHh----CCCe-ecCCCeeeEEEEECCCcccc--CCCCCCHH
Confidence 1211122 334444544 44433 33444444455555543 3321 11222 45555666421100 00001134
Q ss_pred HHHHHHHHCCcee-eccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDSCKEHGLLL-GRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~e~GVLl-~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.+.|+++|+++ .|....++.+|+.=. ..++++++-+++++++
T Consensus 355 ~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~--~~~~~~~~~~~~~~~l 399 (410)
T PRK06290 355 EFSQYLIKEKLISTVPWDDAGHFLRFSVT--FEAKDEEEEDRILEEI 399 (410)
T ss_pred HHHHHHHHhCCEEEECCccccCeEEEEEE--cccccccchhHHHHHH
Confidence 6888898886544 443223457887533 2344678888888875
No 168
>PRK06207 aspartate aminotransferase; Provisional
Probab=96.34 E-value=0.082 Score=52.54 Aligned_cols=170 Identities=11% Similarity=0.039 Sum_probs=91.5
Q ss_pred cccceEEehhHhhchhccchhh-hhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYL-GFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~f-A~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
.||+++|.||+..-|-..|..+ ....+...+| ++|.++ .|+ =+|.+++++++.+.+.. ... ....+.
T Consensus 209 ~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGl-RiG~ii~~~~l~~~~~~--~~~-~~~~~~ 284 (405)
T PRK06207 209 RYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGY-RLGVAFGSPAIIDRMEK--LQA-IVSLRA 284 (405)
T ss_pred HcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCccc-ceEEEEcCHHHHHHHHH--HHh-HhccCC
Confidence 5799999999998774334211 1112233455 579998 774 89999999998887753 110 001111
Q ss_pred hhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 77 LKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 77 ~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
++++. .++.++++. ..+++ .+...+.-+.+.+.| ++++.+.-. ..-|+++.+++.... .+ ...
T Consensus 285 ~~~~q-~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L----~~~~~~~~~~p~gg~fl~~~l~~~~-----~~---~~~ 351 (405)
T PRK06207 285 AGYSQ-AVLRTWFSEPDGWMKDRIARHQAIRDDLLRVL----RGVEGVFVRAPQAGSYLFPRLPRLA-----VS---LHD 351 (405)
T ss_pred CHHHH-HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH----hcCCCceecCCCeeEEEEEeCcccC-----CC---HHH
Confidence 22211 333444443 23333 333333333333333 333322212 223677777774211 01 245
Q ss_pred HHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+...|. ++||++.++.. .++.+|+. +.. +++++++.++..
T Consensus 352 ~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris--~~~---~~~~l~~al~rl 396 (405)
T PRK06207 352 FVKILRLQAGVIVTPGTEFSPHTADSIRLN--FSQ---DHAAAVAAAERI 396 (405)
T ss_pred HHHHHHHhcCEEEeCchHhCCCCCCeEEEE--ecC---CHHHHHHHHHHH
Confidence 777776 68999988531 24678875 222 468888888764
No 169
>PRK02948 cysteine desulfurase; Provisional
Probab=96.31 E-value=0.036 Score=54.12 Aligned_cols=167 Identities=10% Similarity=0.022 Sum_probs=85.9
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhH-HHhhhhhhhccCCCCccchh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCT-FENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI-~d~~~~~~~~~~~~~~hg~T 78 (329)
..+|+++|+|++++ ||.... ..+.++ .| ..|.+| ..-+|++.+++++ +..... .........++|
T Consensus 165 ~~~~~~vivD~~~~-~g~~~~--~~~~~~--~d~~~~s~~K~~g--p~G~G~l~~~~~~~~~~~~~--~~~~~~~~~~~t 235 (381)
T PRK02948 165 KKYNVLFHSDCVQT-FGKLPI--DVFEMG--IDSLSVSAHKIYG--PKGVGAVYINPQVRWKPVFP--GTTHEKGFRPGT 235 (381)
T ss_pred HHcCCEEEEEChhh-cccccc--CcccCC--CCEEEecHHhcCC--CCcEEEEEEcCCCCCCCccc--CCCCCCCcCCCC
Confidence 35689999999876 654321 122333 46 459653 1126777777765 211110 000000011222
Q ss_pred hhcc--HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-----eceeeEEEeecCCCCCCCCChH
Q psy7882 79 ISDT--VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-----KGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 79 ~agn--lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-----~GLm~gIef~~d~~~~~p~~~~ 148 (329)
.+.. .++.++++. +.+++ .++++++.++|.++|+++ ..+.. ..+ ...+.++.+.. .+
T Consensus 236 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~v~--~~~~~~~~~~~i~~~~~~~-------~~-- 302 (381)
T PRK02948 236 VNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTL--PLPIE--VEGHSTSCLPHIIGVTIKG-------IE-- 302 (381)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCEE--EeCCCccCcCCEEEEEeCC-------CC--
Confidence 2111 333334332 22222 567777777777777665 11211 111 11233333321 01
Q ss_pred HHHHHHHHHHHCCceeeccCC---------------------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCKEHGLLLGRGGL---------------------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~e~GVLl~~~G~---------------------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+...|.++||.++.+.. ..+.+|+.+.... |++|+|.+++++
T Consensus 303 -~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~---t~~di~~l~~~l 368 (381)
T PRK02948 303 -GQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQT---TKDQIDTTIHAL 368 (381)
T ss_pred -HHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCC---CHHHHHHHHHHH
Confidence 23466677889999985220 1368999976554 689999999986
No 170
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=96.25 E-value=0.1 Score=51.07 Aligned_cols=160 Identities=13% Similarity=0.022 Sum_probs=89.7
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+++++|.||+...|...... ....+-.|. ++|.++ .|+ =+|.+++.+++.+.+.. .. ...+.++.
T Consensus 183 ~~~~iI~Deay~~f~~~~~~--~~~~~~~~~vi~~~SfSK~~gl~Gl-RvGy~v~~~~l~~~l~~--~~---~~~~~~~~ 254 (364)
T PRK04781 183 GKALVVVDEAYGEFSDVPSA--VGLLARYDNLAVLRTLSKAHALAAA-RIGSLIANAELIAVLRR--CQ---APYPVPTP 254 (364)
T ss_pred CCcEEEEeCcchhhcCCcch--HHHHhhCCCEEEEecChhhcccccc-eeeeeeCCHHHHHHHHh--cc---CCCCCCHH
Confidence 47899999998877421111 111122233 679998 784 89999999999988764 11 11122222
Q ss_pred hccHHHHHHHHhh---HHhH-HHHHHHHHHHHHHHHHHHHHhCCcee-eEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 80 SDTVRPHVQIKKS---VLER-FVHTYVVGNFLLTHLSKLREEFAIVG-DVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 80 agnlA~aaala~~---ile~-le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
+..++. +++... .+.+ +..+.+.-+++.+.|+ +++.+. .....|.++-+++.. ...+.
T Consensus 255 ~~~~a~-~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~----~~~~~~~~~p~~g~f~~~~~~~------------~~~~~ 317 (364)
T PRK04781 255 CAALAE-QALSAPALAVTARRVAEVRAERERLHAALA----QLPGVRRVYPSQGNFLLVRFDD------------AEAAF 317 (364)
T ss_pred HHHHHH-HHHhcccHHHHHHHHHHHHHHHHHHHHHHH----hCCCCCeECCCCCcEEEEEcCC------------HHHHH
Confidence 222222 334331 2211 2333333344444443 343322 233457777776631 23577
Q ss_pred HHHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.|.++||+++++.. .++.+|+. +. +.++.+.++++.
T Consensus 318 ~~l~~~gI~v~~~~~~~~~~~~~Ris----~~--~~~~~~~l~~al 357 (364)
T PRK04781 318 QALLAAGVVVRDQRAAPRLSDALRIT----LG--TPEQNDRVLAAL 357 (364)
T ss_pred HHHHHCCeEEeeCCCCCCCCCeEEEe----CC--CHHHHHHHHHHH
Confidence 888999999988631 24567764 22 578889998875
No 171
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=96.23 E-value=0.14 Score=50.14 Aligned_cols=161 Identities=14% Similarity=0.062 Sum_probs=85.0
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch------HHHhh-cCCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDF-KGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaL-gGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
.+++++|.||+...|...... ....-.|. ++|.+ ..| +-+|.+++++++.+.+.. .. ...+.++
T Consensus 197 ~~~~~iI~De~Y~~~~~~~~~---~~~~~~~~~ivi~SfSK~~g~~G-lRiG~~v~~~~l~~~l~~--~~---~~~~~~~ 267 (374)
T PRK02610 197 PEDILVVIDEAYFEFSQTTLV---GELAQHPNWVILRTFSKAFRLAA-HRVGYAIGHPELIAVLEK--VR---LPYNLPS 267 (374)
T ss_pred cCCcEEEEeccccccCccchH---HHHhcCCCEEEEEecchhccCcc-cceeeeecCHHHHHHHHH--hc---CCCCCCH
Confidence 358999999999877321111 11111122 67999 477 489999999999887764 11 1112222
Q ss_pred hhccHHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHH
Q psy7882 79 ISDTVRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSC 157 (329)
Q Consensus 79 ~agnlA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l 157 (329)
++. .++.+++.. +.+ .++++..-+. +..+.+..++++.+.-.-.-|.++-+++... . -...+++.|
T Consensus 268 ~~q-~a~~~~l~~~~~~--~~~~~~~~~~-r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~------~---~~~~~~~~l 334 (374)
T PRK02610 268 FSQ-LAAQLALEHRQEL--LAAIPEILQE-RDRLYQALQELPQLRVWPSAANFLYLRLSQD------A---ALAALHQAL 334 (374)
T ss_pred HHH-HHHHHHhcCHHHH--HHHHHHHHHH-HHHHHHHHHhCCCcEeCCCcceEEEEeCCCC------C---CHHHHHHHH
Confidence 221 223333433 222 2223322222 2333333334443321223466666666321 1 134577888
Q ss_pred HHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 158 KEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 158 ~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.++||++.++ .+.+||. + . +.++++++++..
T Consensus 335 ~~~gi~v~~~---~~~lRls--~--~--~~~~~~~~l~~l 365 (374)
T PRK02610 335 KAQGTLVRHT---GGGLRIT--I--G--TPEENQRTLERL 365 (374)
T ss_pred HHCCEEEEeC---CCeEEEe--C--C--CHHHHHHHHHHH
Confidence 8999999763 4678875 2 2 246778888764
No 172
>PRK08960 hypothetical protein; Provisional
Probab=96.22 E-value=0.097 Score=51.39 Aligned_cols=168 Identities=13% Similarity=0.037 Sum_probs=85.7
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
..||+++|.||+...+-..+.. .....+.|+ ++|.++ .| +-+|.+++++++.+.+.. ... ......+
T Consensus 195 ~~~~~~li~De~Y~~~~~~~~~--~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~--~~~-~~~~~~s 268 (387)
T PRK08960 195 RARGGHLVVDEIYHGLTYGVDA--ASVLEVDDDAFVLNSFSKYFGMTG-WRLGWLVAPPAAVPELEK--LAQ-NLYISAS 268 (387)
T ss_pred HHcCCEEEEEccccccccCCCC--CChhhccCCEEEEeecccccCCcc-cEEEEEEcCHHHHHHHHH--HHh-hhccCCC
Confidence 3579999999999877322221 112334455 579996 77 489999999998887653 110 0011112
Q ss_pred hhhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 78 KISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 78 T~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
+++. .++.+++.. +.+++ .+..++.-+.+.+.| +.++....+ ..-|+++-+++.... .+ ...
T Consensus 269 ~~~q-~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L----~~~~~~~~~~p~g~~f~~~~~~~~~-----~~---~~~ 335 (387)
T PRK08960 269 TPAQ-HAALACFEPETLAILEARRAEFARRRDFLLPAL----RELGFGIAVEPQGAFYLYADISAFG-----GD---AFA 335 (387)
T ss_pred HHHH-HHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHH----HhcCCcCCcCCCeeEEEEEeccccC-----CC---HHH
Confidence 2221 222333332 22222 122222233333333 334432212 223666677764211 01 245
Q ss_pred HHHHHH-HCCceeecc---CC--CCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882 153 ILDSCK-EHGLLLGRG---GL--SGNTLTALQPKLLNYWTDFVGTPCLDC 196 (329)
Q Consensus 153 ~~~~l~-e~GVLl~~~---G~--~~nvIrl~PPL~It~~t~eeId~~l~~ 196 (329)
+...+. ++||++.|+ +. .++.+|+.-. . +.+++.+.++.
T Consensus 336 ~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~--~---~~~~l~~al~~ 380 (387)
T PRK08960 336 FCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYT--Q---SLPRLQEAVER 380 (387)
T ss_pred HHHHHHHhCCEEEcCchHhCCCCCCCeEEEEec--C---CHHHHHHHHHH
Confidence 677765 689999874 11 2357777532 1 35677776664
No 173
>PLN00175 aminotransferase family protein; Provisional
Probab=96.21 E-value=0.098 Score=52.23 Aligned_cols=171 Identities=9% Similarity=-0.050 Sum_probs=90.4
Q ss_pred ccccceEEehhHhhchhccchhhhh-cccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGF-QCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~-e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
..||+++|.||+...+-..+..... +..+..+. ++|.++ .| +-+|.+++++++.+.+.. .... ...+.
T Consensus 217 ~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G-~RiG~~v~~~~l~~~l~~--~~~~-~~~~~ 292 (413)
T PLN00175 217 KENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQ--AHSF-LTFAT 292 (413)
T ss_pred HHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcc-hheeeeEeCHHHHHHHHH--HHhh-ccCCC
Confidence 3579999999999877433321111 11122121 679998 77 489999999998887653 1100 01111
Q ss_pred hhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 77 LKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 77 ~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
+++.. .+++++++. ..+++ .++.++.-+.+.+.|++ ++. .-.... |+++-+.+.... ++ -...
T Consensus 293 s~~~Q-~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~-~~~~p~g~~f~~~~~~~~~-----~~--~~~~ 359 (413)
T PLN00175 293 ATPMQ-WAAVAALRAPESYYEELKRDYSAKKDILVEGLKE----VGF-KVYPSSGTYFVMVDHTPFG-----FE--NDIA 359 (413)
T ss_pred CHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----CCC-eecCCCeeEEEEEeccccC-----CC--CHHH
Confidence 22211 344455544 23333 33444444555555544 332 112222 444555542110 10 1245
Q ss_pred HHHHHH-HCCceeeccC-------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCK-EHGLLLGRGG-------LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~-e~GVLl~~~G-------~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+...|+ ++||.+.|.. ...+.+||.- .. +++++++.++.+
T Consensus 360 ~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~--~~---~~e~l~~~~~rL 407 (413)
T PLN00175 360 FCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAF--CK---DEETLRAAVERM 407 (413)
T ss_pred HHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEE--cC---CHHHHHHHHHHH
Confidence 777776 5799998742 1235788753 22 578999988864
No 174
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=96.16 E-value=0.095 Score=50.73 Aligned_cols=168 Identities=6% Similarity=-0.122 Sum_probs=84.1
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
..+|+++|.||+..-+...+.......+ .+| ++|.++ .| +=+|.+++++++.+.+.. ... ....++
T Consensus 166 ~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~s~SK~~g~~G-lRiG~~~~~~~~~~~~~~--~~~-~~~~~~ 239 (350)
T TIGR03537 166 REHGIILCSDECYTEIYFGEPPHSALEV--GIENVLAFHSLSKRSGMTG-YRSGFVAGDEKLISFLRK--LRA-NFGVAS 239 (350)
T ss_pred HHcCcEEEEeccccccccCCCCCchhhc--CcCCEEEEeecccccCCcc-ccceeeecCHHHHHHHHH--HHH-hhccCC
Confidence 3579999999997644211111111111 233 569874 45 367888888888877653 110 001111
Q ss_pred hhhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 77 LKISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 77 ~T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
++.+. .++.+++.. +.+++ ..++++..+.+.+.|++ ++.....-.-|+++.+++.... ....+.
T Consensus 240 ~~~~q-~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~----~g~~~~~~~g~~~~~~~~~~~~---------~~~~l~ 305 (350)
T TIGR03537 240 PDFVQ-AAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNK----VGLEYLYPDATFYLWVKVPSGI---------DAKDYA 305 (350)
T ss_pred CHHHH-HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCeEEEEEEECCCCC---------CHHHHH
Confidence 11111 111122322 33322 23344444444444433 3321111122556667764210 134688
Q ss_pred HHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.|.++||++.++.. ..+.+|+. +.. +++++.+.++..
T Consensus 306 ~~L~~~gv~v~~g~~f~~~~~~~~Ri~--~~~---~~~~~~~~l~~~ 347 (350)
T TIGR03537 306 LRLLENGIVVAPGENFGSGEEGYVRVA--LVP---TLEECEEALRLW 347 (350)
T ss_pred HHHHHCCEEEcCchhhCCCCCCEEEEE--ecC---CHHHHHHHHHHH
Confidence 888999999987421 14668874 222 478888888753
No 175
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=96.14 E-value=0.13 Score=49.91 Aligned_cols=173 Identities=10% Similarity=0.009 Sum_probs=89.4
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC-C------CC
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL-K------TP 73 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~-~------~~ 73 (329)
.+|+++|+|.++ +||.. -..... ..+| ..|.+.|.. .+|.+.+++++.+.+........ . ..
T Consensus 159 ~~~~~livDa~~-~~g~~--~~~~~~--~~~d~~v~s~~K~l~g~~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (368)
T PRK13479 159 RHGKRLIVDAMS-SFGAI--PIDIAE--LGIDALISSANKCIEGVP-GFGFVIARRSELEACKGNSRSLSLDLYDQWAYM 232 (368)
T ss_pred HcCCEEEEEccc-ccCCc--cccccc--cCceEEEecCccccccCC-CceEEEECHHHHHHhhcCCCCeeecHHHHHhhh
Confidence 468999999887 46532 122222 2367 249887652 46889999988776543100000 0 00
Q ss_pred cc-c-hhhhcc----HHHHHHHHh----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceee-EEeeceeeEEEeecCCCC
Q psy7882 74 AH-K-LKISDT----VRPHVQIKK----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGD-VRGKGLMIGVDLVQDKET 141 (329)
Q Consensus 74 ~h-g-~T~agn----lA~aaala~----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~-VRG~GLm~gIef~~d~~~ 141 (329)
.+ + ..|+.+ .+..++++. ..+++ .++..++.+++++.|+++ ....+.. ....+.+..+.+...+
T Consensus 233 ~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~-- 308 (368)
T PRK13479 233 EKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL--GFEPLLDAEIQSPIIVTFHAPADP-- 308 (368)
T ss_pred cccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc--CCcccCCchhcCceEEEEECCCCC--
Confidence 00 0 012223 222333321 11233 456666667777766654 1111111 0111223344332111
Q ss_pred CCCCChHHHHHHHHHHHHCCceeeccCC-CCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCKEHGLLLGRGGL-SGNTLTALQ-PKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~e~GVLl~~~G~-~~nvIrl~P-PL~It~~t~eeId~~l~~~ 197 (329)
+.+ ...+.+.|.++||++.++.. ..+.+|+.. .+ .+++|++.+++++
T Consensus 309 --~~~---~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~----~t~edi~~~l~~L 357 (368)
T PRK13479 309 --AYD---FKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGD----VDAADIRRLVAAI 357 (368)
T ss_pred --CcC---HHHHHHHHHHCCEEEecCCCCCCCEEEEecCCC----CCHHHHHHHHHHH
Confidence 011 34688899999999986421 135788864 33 2589999999985
No 176
>PRK07777 aminotransferase; Validated
Probab=96.11 E-value=0.086 Score=51.68 Aligned_cols=166 Identities=10% Similarity=-0.068 Sum_probs=90.1
Q ss_pred cccceEEehhHhhchhccch-hhhhccc-CCcc-h-----HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 6 YRDCGVVVSAVDFGSGDNGT-YLGFQCL-QICR-F-----VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~-~fA~e~~-GV~P-D-----i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
.+++++|.||+..++.-.+. ......+ +... + ++|.++ .| +-+|.+++++++.+.+.. . .+.
T Consensus 190 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~~~~~~--~------~~~ 260 (387)
T PRK07777 190 EHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTG-WKIGWACGPAPLIAAVRA--A------KQY 260 (387)
T ss_pred hcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcC-ceeEEEecCHHHHHHHHH--H------Hhh
Confidence 57899999999987743232 1111111 1211 2 579998 67 489999999988877653 1 111
Q ss_pred hhhhcc----HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChH
Q psy7882 77 LKISDT----VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 77 ~T~agn----lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~ 148 (329)
.++..+ .+++.++.. +.+++ .+.+++..+.+.+.|+++ +. .-.... |+++.+.+...+. .
T Consensus 261 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~~~g~~~~~~~~~~~~~-------~ 328 (387)
T PRK07777 261 LTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA----GF-EVHDSAGTYFLCADPRPLGY-------D 328 (387)
T ss_pred cccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC----CC-CccCCCcceEEEecccccCC-------C
Confidence 122222 233334433 33333 345666666666666553 21 111112 4445556532110 0
Q ss_pred HHHHHHHHHH-HCCceeeccCC-------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCK-EHGLLLGRGGL-------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~-e~GVLl~~~G~-------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
-...+...|. ++||++.++.. ..+.+||. +.. +++++++.++..
T Consensus 329 ~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~--~~~---~~~~l~~~l~~l 380 (387)
T PRK07777 329 DGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFA--FCK---RDDTLDEAIRRL 380 (387)
T ss_pred CHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEE--ecC---CHHHHHHHHHHH
Confidence 1345778886 58999987421 13467774 322 478888888764
No 177
>PRK07681 aspartate aminotransferase; Provisional
Probab=96.10 E-value=0.11 Score=51.29 Aligned_cols=169 Identities=7% Similarity=-0.017 Sum_probs=89.0
Q ss_pred ccccceEEehhHhhchhccchh-hhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
.++|+++|.||+...|-..+.- -....+.-.+| ++|.++ .|+ =+|.+++++++.+.+.. ... ....+
T Consensus 196 ~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-RiG~~i~~~~l~~~~~~--~~~-~~~~~ 271 (399)
T PRK07681 196 KKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGS-RIGYMIGNEEIVRALTQ--FKS-NTDYG 271 (399)
T ss_pred HHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccc-eeEEEecCHHHHHHHHH--HHh-hcccC
Confidence 3579999999999877322211 01111110123 579996 774 78989999999887753 110 00111
Q ss_pred chhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChHHHH
Q psy7882 76 KLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 76 g~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
.+..+ ..++.+++.. +.+++ .+..++.-+.+.+.|++ ++. .-... -|.++-+.+... + ...
T Consensus 272 ~s~~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~-~~~~p~~g~f~~~~l~~~------~---~~~ 336 (399)
T PRK07681 272 VFLPI-QKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRT----FGW-NVDKPAGSMFVWAEIPKG------W---TSL 336 (399)
T ss_pred CCHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCC-cccCCCeeeEEEEECCCC------C---CHH
Confidence 11111 1344455544 23332 22333444444444433 332 11112 266666666321 1 124
Q ss_pred HHHHHHHH-CCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDSCKE-HGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~e-~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+...+.+ +||++.++.. ..+.+|+. +. .++++++++++..
T Consensus 337 ~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis--~~---~~~~~~~~~l~~l 382 (399)
T PRK07681 337 SFAYALMDRANVVVTPGHAFGPHGEGFVRIA--LV---QDEEVLQQAVENI 382 (399)
T ss_pred HHHHHHHHhCCEEEeCChhhCcCCCCeEEEE--ec---CCHHHHHHHHHHH
Confidence 57777776 8999987421 23567774 22 2578999999874
No 178
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=96.09 E-value=0.13 Score=50.04 Aligned_cols=166 Identities=11% Similarity=0.033 Sum_probs=85.1
Q ss_pred ccccceEEehhHhhchhccchhhhh---cccC------Ccch-HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGF---QCLQ------ICRF-VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTP 73 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~---e~~G------V~PD-i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~ 73 (329)
..||+++|.||+...|...+..... +..+ |.-. ++|.++ .| +=+|.+++++++.+.+.. .... ..
T Consensus 172 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G-~R~G~~i~~~~~~~~~~~--~~~~-~~ 247 (357)
T TIGR03539 172 RERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAG-YRAGFVAGDPALVAELLT--VRKH-AG 247 (357)
T ss_pred HHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCc-eeEEEEecCHHHHHHHHH--HHhh-cc
Confidence 3579999999999877543322111 0011 1111 679873 55 367888888888877653 1100 01
Q ss_pred ccchhhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHH
Q psy7882 74 AHKLKISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHM 150 (329)
Q Consensus 74 ~hg~T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~ 150 (329)
...++.+. .+++++++. +.+++ ..+.++.-+++.+.|++ ++.. -.... |+++-+.+.. ..
T Consensus 248 ~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~----~g~~-~~~p~~~~~~~~~~~~-----------~~ 310 (357)
T TIGR03539 248 LMVPAPVQ-AAMVAALGDDGHVAEQKARYAARRAQLKPALEK----AGFR-IDHSEAGLYLWATRGE-----------DA 310 (357)
T ss_pred cCCCHHHH-HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH----cCCC-CcCCCccEEEEEECCC-----------CH
Confidence 11111111 233444443 33322 23334444445454443 3321 11122 4444444321 12
Q ss_pred HHHHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882 151 THILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDC 196 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~ 196 (329)
..+.+.|.++||.+.++.. ..+.+|+.- .. +++++++.++.
T Consensus 311 ~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~--~~---~~~~i~~~~~~ 355 (357)
T TIGR03539 311 WDTVDRLAELGILVAPGDFYGPAGSQHVRVAL--TA---TDERIAAAVAR 355 (357)
T ss_pred HHHHHHHHhCCEEECCccccCCCCCCeEEEEe--cC---CHHHHHHHHHh
Confidence 3477788899999988531 246788763 22 46888888864
No 179
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=96.07 E-value=0.15 Score=49.85 Aligned_cols=166 Identities=10% Similarity=0.008 Sum_probs=83.9
Q ss_pred cccceEEehhHhhchhccchh-hhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
.||+++|.||+...+...+.. -....+.-..+ ++|.++ .| +=+|.+++++++.+.+.. ... ....
T Consensus 195 ~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~G-lRiG~~i~~~~l~~~~~~--~~~---~~~~ 268 (383)
T TIGR03540 195 EYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTG-WRIGMAVGNADLIAGLGK--VKT---NVDS 268 (383)
T ss_pred HcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCcc-ceeeEEeCCHHHHHHHHH--HHH---hccc
Confidence 568999999999866432211 11111110112 679995 56 378999999999887653 110 0111
Q ss_pred hhhhcc-HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChHHHH
Q psy7882 77 LKISDT-VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 77 ~T~agn-lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
++..-. .++++++.. +.+++ .+..++.-+.+.+.|+ +++. .-+.. -|+++-+.+.+. + ...
T Consensus 269 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~----~~~~-~~~~~~~~~~~~~~l~~~------~---~~~ 334 (383)
T TIGR03540 269 GVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALK----KIGI-DVEKPKATFYVWVPVPEG------Y---TSA 334 (383)
T ss_pred CCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH----hCCC-EecCCCcceEEEEECCCC------C---CHH
Confidence 111112 333444443 33322 2223333333444443 3432 11122 255566666321 1 134
Q ss_pred HHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882 152 HILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDC 196 (329)
Q Consensus 152 ~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~ 196 (329)
.+...|+ ++||++.++.. ..+.+|+.= .. +++++.+.++.
T Consensus 335 ~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~--~~---~~~~l~~~l~~ 379 (383)
T TIGR03540 335 EFAARLLEETGVVVTPGVGFGEYGEGYIRISL--TV---PDERLEEAVAR 379 (383)
T ss_pred HHHHHHHHHCCEEEecchhhCccCCCeEEEEe--cC---CHHHHHHHHHH
Confidence 5777765 68999987521 135678752 22 46777777765
No 180
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=95.94 E-value=0.16 Score=49.27 Aligned_cols=162 Identities=7% Similarity=-0.005 Sum_probs=83.0
Q ss_pred cccceEEehhHhhchhccchhh--hhcccCCcch-----HHHhhc-CCccccceeeec-hhHHHhhhhhhhccCCCCccc
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYL--GFQCLQICRF-----VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~f--A~e~~GV~PD-----i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg 76 (329)
.+|+++|.||+...|-..+..+ ....+ ... ++|.++ .|+ -+|.+++. +++.+.+.. .. .....
T Consensus 173 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~i~~~S~SK~~~~~G~-RiG~~v~~~~~~~~~l~~--~~---~~~~~ 244 (356)
T PRK08056 173 SLNIALILDEAFIDFIPDETGFIPQLADN--PHLWVLRSLTKFYAIPGL-RLGYLVNSDDAAVARMRR--QQ---MPWSI 244 (356)
T ss_pred hcCCEEEEecchhccCCcchHHHHHhccC--CCEEEEEechhhccCcch-hheeeecCCHHHHHHHHH--hC---CCCch
Confidence 4689999999988774323111 11111 112 579999 784 89988874 566665542 11 01112
Q ss_pred hhhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 77 LKISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 77 ~T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
++++. .+..+++.. +.+++ .+.+++.-+++.+.|++ .+.+.-....|..+-+.+..+ ...+.
T Consensus 245 ~~~~~-~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 308 (356)
T PRK08056 245 NAFAA-LAGEVILQDRAYQQATWQWLAEEGARFYQALCA----LPLLTVWPGRANYLFLRCERP-----------DIDLQ 308 (356)
T ss_pred hHHHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhc----CCCcEEcCCCCcEEEEEcCCC-----------hHHHH
Confidence 22211 222223322 22222 23344444444444443 322211122344444444210 23578
Q ss_pred HHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.|.++||++.++.. .++.+|+.- . +.++.+.+++++
T Consensus 309 ~~l~~~gI~v~~~~~f~~~~~~~iRis~----~--~~~~~~~l~~~l 349 (356)
T PRK08056 309 RALLTQRILIRSCANYPGLDSRYYRVAI----R--SAAENERLLAAL 349 (356)
T ss_pred HHHHHCCeEEEECCCCCCCCCCEEEEEE----c--CHHHHHHHHHHH
Confidence 888899999987532 135677752 1 467778877764
No 181
>PRK09082 methionine aminotransferase; Validated
Probab=95.92 E-value=0.13 Score=50.48 Aligned_cols=172 Identities=9% Similarity=-0.081 Sum_probs=88.6
Q ss_pred ccccceEEehhHhhchhccchh--hhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTY--LGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~--fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..||+++|.||+...+--.+.. ......++.+- ++|.++ .| +-+|.+++.+++++.+.. ... ....|
T Consensus 193 ~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~iv~~~~l~~~~~~--~~~-~~~~~ 268 (386)
T PRK09082 193 AGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTG-WKVGYCVAPAALSAEFRK--VHQ-YNTFT 268 (386)
T ss_pred HHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchh-hhhhhhhCCHHHHHHHHH--HHh-hhcCC
Confidence 3579999999998655322211 11112222221 679996 66 488999999999887764 110 00122
Q ss_pred chhhhccHHHHHHHH-h-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 76 KLKISDTVRPHVQIK-K-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 76 g~T~agnlA~aaala-~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
.++.+. .++++.+. . +.+++ .+..++.-+.+.+.|++ ++.....-.-|+++.+.+.+-.. .+ ...
T Consensus 269 ~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~~~g~~~~~~~~~~~~~----~~---~~~ 336 (386)
T PRK09082 269 VNTPAQ-LALADYLRAEPEHYLELPAFYQAKRDRFRAALAN----SRFKLLPCEGTYFQLVDYSAISD----LD---DVE 336 (386)
T ss_pred CChHHH-HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh----CCCcccCCCeeEEEEEeccccCC----CC---HHH
Confidence 222211 23334444 2 33322 22334444445555543 33211112236667777742010 11 234
Q ss_pred HHHHH-HHCCceeeccCC------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSC-KEHGLLLGRGGL------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l-~e~GVLl~~~G~------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+...+ .++||++.|... ..+.+|+.- .. +++++++.++..
T Consensus 337 ~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~--~~---~~~~l~~~~~rl 383 (386)
T PRK09082 337 FCQWLTREHGVAAIPLSVFYADPFPHRLVRLCF--AK---QEETLDAAAERL 383 (386)
T ss_pred HHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEe--cC---CHHHHHHHHHHH
Confidence 66655 578999987531 135788763 22 478888888753
No 182
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=95.83 E-value=0.087 Score=51.48 Aligned_cols=171 Identities=11% Similarity=-0.007 Sum_probs=91.4
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcchHH---HhhcCCccc-cceeeechhHHHhhhhhhhccC------CCCc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFVQ---KDFKGSFWD-KLIVHTSTCTFENFIKIKYQIL------KTPA 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi~---KaLgGG~~P-igAv~~~~eI~d~~~~~~~~~~------~~~~ 74 (329)
..||+++|+|=||+ +|-. -.-.+.+++ +++ |.+ | .| +|++.+++++.+.+.+...... ....
T Consensus 160 ~~~g~~~~VDa~qs-~g~~--~idv~~~~~--~~ss~~K~l--G-P~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (355)
T cd00611 160 DTGGVPLVADMSSN-ILSR--PIDVSKFGV--IYAGAQKNL--G-PAGVTVVIVRKDLLGKARKITPSMLNYKTHADNNS 231 (355)
T ss_pred ccCCCeEEEEcccc-ccCC--CCCHHHhCE--EEeeccccc--C-CCceEEEEECHHHHhhcccCCCCcccHHHHHhcCC
Confidence 34799999999998 3321 222333443 432 865 3 35 7999999988865432000000 0000
Q ss_pred cchhhhcc--HHHHHHHHh--hH--HhH-HHHHHHHHHHHHHHHHHHHHhCCcee--eEEeeceeeEEEeecCCCCCCCC
Q psy7882 75 HKLKISDT--VRPHVQIKK--SV--LER-FVHTYVVGNFLLTHLSKLREEFAIVG--DVRGKGLMIGVDLVQDKETKVPL 145 (329)
Q Consensus 75 hg~T~agn--lA~aaala~--~i--le~-le~v~~lG~~L~~gL~eL~~~~p~v~--~VRG~GLm~gIef~~d~~~~~p~ 145 (329)
..+|-+-. .++.++++- +. ++. .++.+++.++|+++|+++-.=+.... ..| .+.++++.+...
T Consensus 232 ~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~r-s~~vvsf~~~~~------- 303 (355)
T cd00611 232 LYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRAR-SRMNVPFRLGKE------- 303 (355)
T ss_pred CCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHc-CceEEEEEcCCh-------
Confidence 01122111 344444432 11 333 55666777777777776521111111 112 234456554321
Q ss_pred ChHHHHHHHHHHHHCCceeeccCCC-CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 146 NSRHMTHILDSCKEHGLLLGRGGLS-GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 146 ~~~~~~~~~~~l~e~GVLl~~~G~~-~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.....+...+.++|+. .+.++. ..++|+.+-.-. |++|||.+++++
T Consensus 304 --~l~~~~~~~~~r~G~~-~~~~~~~~g~vR~S~~~~n---t~edi~~l~~al 350 (355)
T cd00611 304 --ELEKEFLKEAEAAGMI-GLKGHRSVGGIRASIYNAL---SLEGVQALADFM 350 (355)
T ss_pred --hhhHHHHHHHHHCCCc-ccCCCcccCeEEEEccCCC---CHHHHHHHHHHH
Confidence 1224455678889997 444432 478999985544 689999999986
No 183
>PRK08912 hypothetical protein; Provisional
Probab=95.81 E-value=0.22 Score=48.81 Aligned_cols=172 Identities=10% Similarity=-0.071 Sum_probs=87.8
Q ss_pred ccccceEEehhHhhchhccchhh-h-hcccCCcc-h-----HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYL-G-FQCLQICR-F-----VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~f-A-~e~~GV~P-D-----i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..|++++|.||+...+--.|.-+ . .+..+..+ + ++|.++ .|+ -+|.+++++++.+.+.. ... ....+
T Consensus 189 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG~~~~~~~~~~~l~~--~~~-~~~~~ 264 (387)
T PRK08912 189 QRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGW-KVGFVCAAPPLLRVLAK--AHQ-FLTFT 264 (387)
T ss_pred HHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCc-eeEEEecCHHHHHHHHH--HHh-hcccc
Confidence 45799999999987653222110 0 11112211 2 579998 884 88999999999887753 110 00011
Q ss_pred chhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChHHHH
Q psy7882 76 KLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 76 g~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
.+.... .++++++.. +.+++ .++.++.-+++.+.|++ ++. .-... -|+++.+.+..... + .-..
T Consensus 265 ~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~-~~~~~~g~~~l~~~l~~~~~---~---~~~~ 332 (387)
T PRK08912 265 TPPNLQ-AAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRR----IGF-PVLPSQGTYFLTVDLAPLGL---A---EDDV 332 (387)
T ss_pred CChHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----CCC-cccCCCcceEEEecccccCC---C---CCHH
Confidence 111111 223333332 33333 33445555555555544 332 11112 25566666642110 0 0124
Q ss_pred HHHHHHH-HCCceeeccCC------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDSCK-EHGLLLGRGGL------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~-e~GVLl~~~G~------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.+.+. ++||++.+... ..+.+|+. +.. .++++++.++..
T Consensus 333 ~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~--~~~---~~~~l~~~l~rl 380 (387)
T PRK08912 333 AFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFC--FAK---RDATLDEAVERL 380 (387)
T ss_pred HHHHHHHhcCCEEEecchhhCCCCCCCCEEEEE--EeC---CHHHHHHHHHHH
Confidence 5777765 57999987421 13677775 222 467888887753
No 184
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=95.71 E-value=0.31 Score=47.25 Aligned_cols=158 Identities=14% Similarity=0.059 Sum_probs=82.4
Q ss_pred cceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
+.++|.||+...|. |.-.. ....-.+. ++|.++ .|+ -+|.+++++++.+.+.. .. .....++++
T Consensus 178 ~~~~ivDe~y~~~~--~~~~~-~~~~~~~~vi~~~S~SK~~~~~Gl-RiG~~v~~~~~~~~~~~--~~---~~~~~~~~~ 248 (351)
T PRK14807 178 RGIVVVDEAYFEFY--GNTIV-DVINEFENLIVLRTLSKAFGLAGL-RVGYAVANENILKYLNL--VK---SPYNINSLS 248 (351)
T ss_pred CCEEEEeCcchhhc--ccchH-HHhhhCCCEEEEecchHhcccchh-ceeeeecCHHHHHHHHH--cc---CCCCcCHHH
Confidence 56789999997773 32111 11111122 679997 784 89999999999887763 11 011111111
Q ss_pred ccHHHHHHHHhhHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHH
Q psy7882 81 DTVRPHVQIKKSVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKE 159 (329)
Q Consensus 81 gnlA~aaala~~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e 159 (329)
. .+..++++...+++ .+...+.-+++.+.|+ +.+.+.-...-|.++-+.+.. ...+.+.|.+
T Consensus 249 q-~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~----~~~g~~~~~~~~~~~~i~~~~------------~~~~~~~l~~ 311 (351)
T PRK14807 249 Q-VIALKVLRTGVLKERVNYILNERERLIKELS----KIPGIKVYPSKTNFILVKFKD------------ADYVYQGLLE 311 (351)
T ss_pred H-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH----hCCCcEECcCCccEEEEEcCC------------HHHHHHHHHH
Confidence 1 22233333322322 3333333333444433 333222122335555455531 2457888889
Q ss_pred CCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 160 HGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 160 ~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+||++.+.+. ..+.+|+.-. +.++.+.++++.
T Consensus 312 ~gV~v~~~~~~~~~~~~iRis~~------~~~~~~~l~~~l 346 (351)
T PRK14807 312 RGILVRDFSKVEGLEGALRITVS------SCEANDYLINGL 346 (351)
T ss_pred CCEEEEECCCCCCCCCeEEEEcC------CHHHHHHHHHHH
Confidence 9999977431 2356777521 356777777764
No 185
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=95.69 E-value=0.32 Score=47.94 Aligned_cols=174 Identities=13% Similarity=-0.001 Sum_probs=90.8
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCccccceeeechhHHHhhhhhhhcc----------
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFWDKLIVHTSTCTFENFIKIKYQI---------- 69 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~---------- 69 (329)
..||+++|+|=+|+ +|-. -+-.+ .+ |+ -|.|+|-. -+|.+.++++..+.+.+...+.
T Consensus 161 ~~~g~~~vVDa~qs-~G~~--pidv~--~i--D~~~~s~~K~l~~P~-G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~ 232 (378)
T PRK03080 161 ADREGLTICDATSA-AFAL--PLDWS--KL--DVYTFSWQKVLGGEG-GHGMAILSPRAVERLESYTPARPIPKFFRLTK 232 (378)
T ss_pred ccCCCeEEEecccc-cccC--CCCHH--HC--cEEEEehhhhCCCCC-ceEEEEECHHHHHhhhcccCCCCCchhheecc
Confidence 35789999999887 4322 11222 22 72 29987631 3799999999887654310000
Q ss_pred ----CCCCccchhhh-cc-HHH---HHHHHh--h--HHhH-HHHHHHHHHHHHHHHHHHHHhCCce--eeEEeeceeeEE
Q psy7882 70 ----LKTPAHKLKIS-DT-VRP---HVQIKK--S--VLER-FVHTYVVGNFLLTHLSKLREEFAIV--GDVRGKGLMIGV 133 (329)
Q Consensus 70 ----~~~~~hg~T~a-gn-lA~---aaala~--~--ile~-le~v~~lG~~L~~gL~eL~~~~p~v--~~VRG~GLm~gI 133 (329)
......+.|+. .+ .+. .++++- + -++. .++.+++.++++++|+++-.-.... ...|+ +.+.++
T Consensus 233 ~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s-~~i~~~ 311 (378)
T PRK03080 233 GGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRS-NTSVTL 311 (378)
T ss_pred chHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccC-ccEEEE
Confidence 00001112221 22 222 333332 1 1222 4455666666666665442100110 01122 346666
Q ss_pred EeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 134 DLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 134 ef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.. . +......+...+.++|+++...++ ..+++|+.|-.-. +++|||.+++++
T Consensus 312 ~~~~-~------~~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~---t~~di~~l~~al 367 (378)
T PRK03080 312 DFVD-A------QAAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTV---EPADVEALTPWL 367 (378)
T ss_pred EcCC-c------hHHHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCC---CHHHHHHHHHHH
Confidence 6532 0 001223466667778888765332 2478999987665 589999999986
No 186
>PLN02409 serine--glyoxylate aminotransaminase
Probab=95.68 E-value=0.24 Score=49.23 Aligned_cols=174 Identities=13% Similarity=0.031 Sum_probs=92.0
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCC-------
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILK------- 71 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~------- 71 (329)
-..+|+++|+|+||+ +|. ..........| ..|.+++.. -+|.+..+++..+.+.+.......
T Consensus 165 ~~~~g~~~vvD~v~s-~g~----~~id~~~~~~D~~~~s~~K~l~~P~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
T PLN02409 165 CAQHPALLLVDGVSS-IGA----LDFRMDEWGVDVALTGSQKALSLPT-GLGIVCASPKALEASKTAKSPRVFFDWADYL 238 (401)
T ss_pred hhccCcEEEEEcccc-cCC----ccccccccCccEEEEcCccccCcCC-CcceeEECHHHHHHHhcCCCCCeecCHHHHH
Confidence 346799999999986 432 11111122346 239998752 478899999888765430000000
Q ss_pred CCccch---hhhcc----HHHHHHHHh--h-HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-Ee-eceeeEEEeecC
Q psy7882 72 TPAHKL---KISDT----VRPHVQIKK--S-VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RG-KGLMIGVDLVQD 138 (329)
Q Consensus 72 ~~~hg~---T~agn----lA~aaala~--~-ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG-~GLm~gIef~~d 138 (329)
.+...+ .++.+ .++.++++- + -+++ .++.+++.++++++|+++ ....+..- .. .+.+..+.+...
T Consensus 239 ~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~--g~~~~~~~~~~~s~~v~~~~~p~~ 316 (401)
T PLN02409 239 KFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW--GLKLCTKKPEWRSDTVTAVVVPEG 316 (401)
T ss_pred HHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCeeccCChhhcccceEEEeCCCC
Confidence 000011 12333 233333332 1 1222 456677777777777654 12222211 11 233445554321
Q ss_pred CCCCCCCChHHHHHHHHHHH-HCCceeecc-CC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 139 KETKVPLNSRHMTHILDSCK-EHGLLLGRG-GL-SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 139 ~~~~~p~~~~~~~~~~~~l~-e~GVLl~~~-G~-~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
++ ...+.+.+. ++|+.+... +. .+.++|+..---+ +.+|+..+++++
T Consensus 317 ------~~---~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~---~~~~~~~~~~~~ 366 (401)
T PLN02409 317 ------ID---SAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNV---NELQLLGALAGV 366 (401)
T ss_pred ------CC---HHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCC---CHHHHHHHHHHH
Confidence 11 234655554 679988763 22 4689999876544 689999999986
No 187
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=95.66 E-value=0.18 Score=48.77 Aligned_cols=160 Identities=15% Similarity=0.059 Sum_probs=84.2
Q ss_pred cceEEehhHhhchhccchhh-hhcccC--Ccch-HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhccH
Q psy7882 8 DCGVVVSAVDFGSGDNGTYL-GFQCLQ--ICRF-VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISDTV 83 (329)
Q Consensus 8 giLLI~DEVqTGfGRTG~~f-A~e~~G--V~PD-i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~agnl 83 (329)
++++|.||+...|... .+. ....+. +.=. ++|-...| +.+|.+++++++.+.+.. .. .....++++. .
T Consensus 183 ~~~ii~De~y~~~~~~-~~~~~~~~~~~vi~~~S~SK~~~~G-lRiG~~i~~~~~i~~~~~--~~---~~~~~~~~~q-~ 254 (356)
T PRK04870 183 PGLVVVDEAYQPFAGD-SWLPRLARFPNLLVMRTVSKLGLAG-LRLGYLAGHPAWIAELDK--VR---PPYNVNVLTQ-A 254 (356)
T ss_pred CCEEEEECCchhhcCc-chHHHHhhCCCEEEEecchhhhhHH-HhhhhhhCCHHHHHHHHH--cc---CCCcCCHHHH-H
Confidence 6789999999877422 111 111110 0000 57943345 479999999998887753 11 0111111111 1
Q ss_pred HHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCC
Q psy7882 84 RPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHG 161 (329)
Q Consensus 84 A~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~G 161 (329)
++..+++. +.+++ .+++++.-+.+.+.|++ .+.+.-...-|.++.+.+. + ...+...|.++|
T Consensus 255 ~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~~l~~~g 318 (356)
T PRK04870 255 TALFALEHVDVLDAQAAQLRAERTRLAAALAA----LPGVTVFPSAANFILVRVP-D-----------AAAVFDGLKTRG 318 (356)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh----CCCcEECCCCCeEEEEECC-C-----------HHHHHHHHHHCC
Confidence 22233333 33433 44455555555555543 3322212234555555542 1 235778889999
Q ss_pred ceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 162 LLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 162 VLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|.+.++.. ..+.+|+.-. +.++.+.+++++
T Consensus 319 I~v~~~~~f~~~~~~~iRis~~------~~~~~~~l~~al 352 (356)
T PRK04870 319 VLVKNLSGMHPLLANCLRVTVG------TPEENAQFLAAL 352 (356)
T ss_pred EEEEECCCCCCCCCCeEEEeCC------CHHHHHHHHHHH
Confidence 99987532 2456776532 578899988875
No 188
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=95.66 E-value=0.3 Score=48.33 Aligned_cols=155 Identities=12% Similarity=0.003 Sum_probs=92.7
Q ss_pred cceEEehhHhhchhccchhhhhcccCCcch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
++++|+||-..-|.. --+..... .|+ ++|+.|=..+=+|-+++++++.+.+.. .. ..|+
T Consensus 177 ~~~vVvDEAY~eF~~---~~~~~l~~-~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~--------vr--~p~~ 242 (356)
T COG0079 177 GGLVVIDEAYIEFSP---ESSLELLK-YPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNK--------VR--PPFN 242 (356)
T ss_pred CcEEEEeCchhhcCC---chhhhhcc-CCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHH--------hc--CCCC
Confidence 789999999998865 11222222 344 679764222468889999999998874 11 1233
Q ss_pred cc-HHHHHHH---Hh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882 81 DT-VRPHVQI---KK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLNSRHMTHI 153 (329)
Q Consensus 81 gn-lA~aaal---a~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~~~~~~~~ 153 (329)
-+ .+.+++. +. +.+++ .+++..--++|.+.|+.+ + +..| -..+-++-+++.. .. ...+
T Consensus 243 v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~----~-~~~v~pS~aNFvlv~~~~---------~~-~~~l 307 (356)
T COG0079 243 VSSPALAAAIAALRDADYLEESVERIREERERLYAALKAL----G-LFGVFPSQANFVLVRVPD---------AE-AAAL 307 (356)
T ss_pred CCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhC----C-CCeecCCCCcEEEEECCC---------cc-HHHH
Confidence 33 3333333 33 44444 555555555565555543 3 2211 2225556555532 13 4568
Q ss_pred HHHHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.+.++||+++.+.. ..+.+|+. + .|++|-+.+++++
T Consensus 308 ~~~L~~~giivR~~~~~~~~~~~lRit----v--gt~een~~ll~AL 348 (356)
T COG0079 308 AEALLKKGILVRDCSSVGLLPGYLRIT----V--GTPEENDRLLAAL 348 (356)
T ss_pred HHHHHHCCEEEEeCCCCCCCCCeEEEE----e--CCHHHHHHHHHHH
Confidence 8999999999998742 23467763 3 2688889999875
No 189
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=95.66 E-value=0.2 Score=48.71 Aligned_cols=148 Identities=8% Similarity=0.043 Sum_probs=73.6
Q ss_pred ccceEEehhHhhchhccchhhh-hcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLG-FQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA-~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
+++ +|+||+...|...+..-. .....-.+. ++|.++ .|+ -+|.+++.+++++.+.. .. ...+.++
T Consensus 177 ~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~Gl-RiG~~v~~~~~~~~~~~--~~---~~~~~s~ 249 (360)
T PRK07392 177 FAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGL-RLGYAIAHPDRLQRWQQ--WR---DPWPVNG 249 (360)
T ss_pred CCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCch-heeeeeCCHHHHHHHHh--hC---CCCCCCH
Confidence 454 666999998854442111 111111122 679998 885 99999999998887653 11 0111122
Q ss_pred hhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 79 ISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 79 ~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
++. .++.++++. +..+. .+.+++.-+++.+.| ++++.+.-..+-|.++-+++.. -...+...
T Consensus 250 ~~q-~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L----~~~~~~~~~~~~~~fl~~~~~~-----------~~~~l~~~ 313 (360)
T PRK07392 250 LAA-AAAIAALADRDFQQQTWAWLPPAREALFQGL----ASLPGLTPLPSAANFLLVQSQG-----------SALQLQEK 313 (360)
T ss_pred HHH-HHHHHHhccHHHHHHHHHHHHHHHHHHHHHH----HhCCCcEECCCCCCEEEEEcCC-----------CHHHHHHH
Confidence 211 222333433 33222 122223333333333 3343322222446666555531 02346666
Q ss_pred H-HHCCceeeccCC----CCCEEEEe
Q psy7882 157 C-KEHGLLLGRGGL----SGNTLTAL 177 (329)
Q Consensus 157 l-~e~GVLl~~~G~----~~nvIrl~ 177 (329)
+ .++||++.++.. ..+.+|+.
T Consensus 314 ll~~~gv~v~pg~~f~~~~~~~iRi~ 339 (360)
T PRK07392 314 LLQQHRILIRDCLSFPELGDRYFRVA 339 (360)
T ss_pred HHhhCCEEEEeCCCCCCCCCCEEEEE
Confidence 5 468999988532 23577774
No 190
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=95.64 E-value=0.28 Score=47.97 Aligned_cols=168 Identities=10% Similarity=0.013 Sum_probs=84.9
Q ss_pred ccccceEEehhHhhchhccch----hhhhcc-cCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT----YLGFQC-LQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~----~fA~e~-~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..|++++|.||+...|-..|. +..... .+..=. ++|.++ .| +=+|.+++++++.+.+.. ... ...
T Consensus 196 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~i~~~~l~~~~~~--~~~---~~~ 269 (385)
T PRK09276 196 KKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTG-WRIGFAVGNADLIAGLGK--VKS---NVD 269 (385)
T ss_pred HHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcc-hhheeeeCCHHHHHHHHH--HHh---hcc
Confidence 357899999999987632221 111110 111001 679985 55 368889999999887763 110 011
Q ss_pred chhhhcc-HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChHHH
Q psy7882 76 KLKISDT-VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSRHM 150 (329)
Q Consensus 76 g~T~agn-lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~~~ 150 (329)
.+..... .+++.++.. ..+++ .+..++.-+++.+.|++ ++. .-... -|+++-+.+... .+ .
T Consensus 270 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~-~~~~~~~~~~~~v~~~~~------~~---~ 335 (385)
T PRK09276 270 SGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRK----LGL-EVEPPKATFYVWAPVPKG------YT---S 335 (385)
T ss_pred CCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh----CCC-cccCCCcceEEEEECCCC------CC---H
Confidence 1111111 333344432 22222 22334444444444443 332 11122 255566666321 11 3
Q ss_pred HHHHHHHH-HCCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCK-EHGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~-e~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+...++ ++||++.++. ...+.+|+.- .. +++++.+.++..
T Consensus 336 ~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~--~~---~~~~l~~~l~~l 382 (385)
T PRK09276 336 AEFATLLLDKAGVVVTPGNGFGEYGEGYFRIAL--TV---PDERIEEAVERI 382 (385)
T ss_pred HHHHHHHHHhCCEEECCchhhCCCCCCeEEEEe--CC---CHHHHHHHHHHH
Confidence 45777776 5899998842 1235788853 22 467887777653
No 191
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=95.58 E-value=0.28 Score=50.57 Aligned_cols=174 Identities=11% Similarity=0.035 Sum_probs=87.8
Q ss_pred cccceEEehhHhhchhccchhh-h---h-ccc---CCcch-------HHHhhc-CCccccceeeec-hhHHHhhhhhhhc
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYL-G---F-QCL---QICRF-------VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKYQ 68 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~f-A---~-e~~---GV~PD-------i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~~ 68 (329)
.||+++|.||+...+-..|.-+ + . +.+ ++.|| ++|.++ .|+ -+|.+++. +.+.+.+.. ..
T Consensus 230 ~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGl-RvG~li~~~~~l~~~~~~--~~ 306 (496)
T PLN02376 230 RKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGF-RVGIVYSFNDSVVSCARK--MS 306 (496)
T ss_pred HcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcc-eEEEEEECCHHHHHHHHH--Hh
Confidence 5799999999999864344211 1 1 111 12345 579996 775 89998884 555444322 11
Q ss_pred cCCCCccchhhhccHHHHHHHHh-hHHhH-HH----HHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCC
Q psy7882 69 ILKTPAHKLKISDTVRPHVQIKK-SVLER-FV----HTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKET 141 (329)
Q Consensus 69 ~~~~~~hg~T~agnlA~aaala~-~ile~-le----~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~ 141 (329)
.+.+.++.+. .+.++.+.. +.+++ +. +.++.-+.+.+.|++ +++ ..+. .-|+++-+++......
T Consensus 307 ---~~~~vs~~~Q-~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~----~gi-~~~~~~aG~flwi~l~~~~~~ 377 (496)
T PLN02376 307 ---SFGLVSSQTQ-LMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKK----ADI-ACLTSNAGLFAWMDLRHLLRD 377 (496)
T ss_pred ---hcCCCCHHHH-HHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHH----CCC-cccCCCceEEEEEEchhhhcc
Confidence 1222222222 233344444 43333 22 222223333333332 332 2222 3468888888431100
Q ss_pred CCCCChHHHHHHHHHHHH-CCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCKE-HGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~e-~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+ +....+++.+.+ .||.+.|... .++.+|+.= ...+++++++.++..
T Consensus 378 ~~~~--~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~f----a~~~~~~l~~al~rl 432 (496)
T PLN02376 378 RNSF--ESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICF----ANMDDDTLHVALGRI 432 (496)
T ss_pred CCch--hHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEe----eCCCHHHHHHHHHHH
Confidence 0001 122457777776 5999988432 245677642 212467888888764
No 192
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=95.57 E-value=0.31 Score=47.15 Aligned_cols=87 Identities=13% Similarity=0.084 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCceee--EEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHC-CceeeccC-----
Q psy7882 97 FVHTYVVGNFLLTHLSKLREEFAIVGD--VRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEH-GLLLGRGG----- 168 (329)
Q Consensus 97 le~v~~lG~~L~~gL~eL~~~~p~v~~--VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G----- 168 (329)
.++..++.+++.++|+++.. ...... -...+.++.+.+.. . + ...+.+.|.++ ||.+....
T Consensus 272 ~~~~~~l~~~~~~~l~~~~~-~~~~~~~~~~~~~~~v~~~~~~-~------~---~~~~~~~L~~~~gi~v~~g~~~~~~ 340 (376)
T TIGR01977 272 AKKECMLTEKLLNGLREINK-VKIYGPADPANRVGVVSFTVEG-I------D---SEEVADILDEKFDIATRTGLHCAPL 340 (376)
T ss_pred HHHHHHHHHHHHHHHhcCCC-eEEeCCCCccccCCeEEEEECC-C------C---HHHHHHHHhccCCEEEEcccccchH
Confidence 44566666666666654310 011110 11134566666521 1 1 34577888887 88886521
Q ss_pred -------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 169 -------LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 169 -------~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.....+|+.+..-. |++||+.+++++
T Consensus 341 ~~~~~g~~~~~~iRis~~~~~---t~~dv~~~~~~l 373 (376)
T TIGR01977 341 AHKTIGTFATGTIRLSLGYFN---TEEEIEKLLEAL 373 (376)
T ss_pred HHHHhCCCCCCeEEEecCCCC---CHHHHHHHHHHH
Confidence 12468999987655 689999999985
No 193
>PRK08175 aminotransferase; Validated
Probab=95.53 E-value=0.28 Score=48.29 Aligned_cols=171 Identities=7% Similarity=-0.022 Sum_probs=86.0
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCC--cch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI--CRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV--~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~ 74 (329)
..||+++|.||+...+--.|... .....+ .+| ++|.++ .| +=+|.+++++++.+.+.. ... ...
T Consensus 194 ~~~~i~ii~De~y~~l~~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~g~pG-lRiG~~~~~~~l~~~~~~--~~~--~~~ 267 (395)
T PRK08175 194 KRYDVLVVHDLAYADIVYDGWKA-PSIMQVPGAKDVAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALAR--IKS--YHD 267 (395)
T ss_pred HHcCcEEEEecchHhhccCCCCC-cchhcCCCcccCEEEEeeccccccCcc-hhheeeeCCHHHHHHHHH--HHh--hcc
Confidence 35799999999997663222111 011111 134 579985 55 367888899999887653 110 001
Q ss_pred c-chhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHH
Q psy7882 75 H-KLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHM 150 (329)
Q Consensus 75 h-g~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~ 150 (329)
+ .++.+. .++++++.. +.+++ .+..++.-+++.+.|+. ++.....-.-|+++-+++..+.. ..-.
T Consensus 268 ~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~p~~g~~i~i~l~~~~~------~~~~ 336 (395)
T PRK08175 268 YGTFTPLQ-VAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHE----AGWMVEMPKASMYVWAKIPEPYA------AMGS 336 (395)
T ss_pred cCCCcHHH-HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----cCCcccCCCEEEEEEEECCcccC------CCCH
Confidence 1 111111 223333332 22222 22233333344444443 33211112247788888753210 0013
Q ss_pred HHHHHHHH-HCCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCK-EHGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~-e~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+.+.++ ++||++.+.. ...+.+||. +. .+++.+.+.++..
T Consensus 337 ~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis--~~---~~~~~~~~al~~l 383 (395)
T PRK08175 337 LEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFA--LI---ENRDRIRQAIRGI 383 (395)
T ss_pred HHHHHHHHHhCCEEEeCchhhCcCCCCeEEEE--eC---CCHHHHHHHHHHH
Confidence 45777665 6899998852 123578874 22 2567887777753
No 194
>PRK08068 transaminase; Reviewed
Probab=95.51 E-value=0.21 Score=49.00 Aligned_cols=168 Identities=10% Similarity=-0.019 Sum_probs=89.8
Q ss_pred ccccceEEehhHhhchhccch-h-hhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT-Y-LGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~-~-fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
.++|+++|.||+...+...+. . ......+..+- ++|.++ .|+ =+|.+++.+++.+.+.. .. ....
T Consensus 197 ~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG~~~~~~~l~~~l~~--~~---~~~~ 270 (389)
T PRK08068 197 KKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGW-RVAFAVGNESVIEAINL--LQ---DHLF 270 (389)
T ss_pred HHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccc-eeEeEecCHHHHHHHHH--HH---hhcc
Confidence 357999999999876644431 1 11122222111 679995 674 78999999999887763 11 0111
Q ss_pred chhhhcc-HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecCCCCCCCCChHHH
Q psy7882 76 KLKISDT-VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQDKETKVPLNSRHM 150 (329)
Q Consensus 76 g~T~agn-lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d~~~~~p~~~~~~ 150 (329)
.++.... .++++++.. +.+++ .+..++.-+.+.+.|++ ++. .-....| +++-+.+.... -.
T Consensus 271 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~----~g~-~~~~~~g~~~~~v~~~~~~---------~~ 336 (389)
T PRK08068 271 VSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACRE----IGW-EVDAPKGSFFAWMPVPKGY---------TS 336 (389)
T ss_pred CCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCC-cccCCCeeEEEEEECCCCC---------CH
Confidence 1222222 333444433 33333 34445555555555544 332 1123334 45566664211 13
Q ss_pred HHHHHHHHH-CCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKE-HGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e-~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+...|.+ +||++.++. ...+.+||.=. . +++.+.+.++..
T Consensus 337 ~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~--~---~~~~l~~al~~l 383 (389)
T PRK08068 337 EQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL--T---DEERLREAVERI 383 (389)
T ss_pred HHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc--C---CHHHHHHHHHHH
Confidence 457888875 699998742 12457777531 1 356677766653
No 195
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=95.42 E-value=0.29 Score=46.71 Aligned_cols=90 Identities=11% Similarity=-0.040 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccC--CCCCE
Q psy7882 97 FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG--LSGNT 173 (329)
Q Consensus 97 le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G--~~~nv 173 (329)
.++..++.+++.+.|+++ +.+.-+ ...+.++.+.+..+... ......+.+.|.++|+++.+.. .....
T Consensus 250 ~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~iv~f~~~~~~~~-----~~~~~~i~~~L~~~g~~~~~~~~~~~~~~ 320 (345)
T cd06450 250 IDRIVDLAKYLAELIRAD----PGFELLGEPNLSLVCFRLKPSVKL-----DELNYDLSDRLNERGGWHVPATTLGGPNV 320 (345)
T ss_pred HHHHHHHHHHHHHHHhcC----CCeEEecCCceeEEEEEECCcchh-----hHHHHHHHHHHHhcCCEEEEeeEECCeEE
Confidence 566777777777777654 221111 01234566665421000 0124568888889865543321 12467
Q ss_pred EEEeCccccCcCCHHHHHHHHhcc
Q psy7882 174 LTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 174 Irl~PPL~It~~t~eeId~~l~~~ 197 (329)
+|+.+-...+ |++|+|++++++
T Consensus 321 lRis~~~~~~--t~~di~~l~~~l 342 (345)
T cd06450 321 LRFVVTNPLT--TRDDADALLEDI 342 (345)
T ss_pred EEEEecCCCC--CHHHHHHHHHHH
Confidence 8887754332 689999999975
No 196
>PRK08361 aspartate aminotransferase; Provisional
Probab=95.39 E-value=0.23 Score=48.81 Aligned_cols=168 Identities=8% Similarity=0.028 Sum_probs=83.2
Q ss_pred cccceEEehhHhhchhccch-hhhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 6 YRDCGVVVSAVDFGSGDNGT-YLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~-~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
.+++++|.||+...|--.+. ..+. ....+| ++|.++ .| +-+|.+++++++.+.+.. .... ...+.
T Consensus 197 ~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~~i~~~s~SK~~~~~G-lRiG~~~~~~~~~~~~~~--~~~~-~~~~~ 270 (391)
T PRK08361 197 DYNIYILSDEPYEHFLYEGAKHYPM--IKYAPDNTILANSFSKTFAMTG-WRLGFVIAPEQVIKDMIK--LHAY-IIGNV 270 (391)
T ss_pred HcCeEEEEEcccccceeCCCCCCCH--hhcCCCCEEEEecCchhcCCcH-hhhhhhccCHHHHHHHHH--HHhh-hccCC
Confidence 56899999999876632221 1111 112233 579997 66 378889999888876543 1000 01111
Q ss_pred hhhhccHHHHHHHHh-h---HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHH
Q psy7882 77 LKISDTVRPHVQIKK-S---VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHM 150 (329)
Q Consensus 77 ~T~agnlA~aaala~-~---ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~ 150 (329)
+++.. .+.+.++.. + .+++ .+..++.-+.+.+.|+ .++.+.-.... |+++.+.+.... ++ .
T Consensus 271 ~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~----~~~~~~~~~p~g~~~~~~~l~~~~-----~~---~ 337 (391)
T PRK08361 271 ASFVQ-IAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLK----EMPHIKVFEPKGAFYVFANIDETG-----MS---S 337 (391)
T ss_pred ChHHH-HHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHH----hCCCCeecCCCEEEEEEEECCCCC-----CC---H
Confidence 21111 222333433 2 1222 2222333333333333 33333222223 555666664211 11 2
Q ss_pred HHHHHHHH-HCCceeeccC---C-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCK-EHGLLLGRGG---L-SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~-e~GVLl~~~G---~-~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+...+. ++||++.++. . ..+.+|+. +.. +++++++.++..
T Consensus 338 ~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~~---~~~~l~~al~~l 384 (391)
T PRK08361 338 EDFAEWLLEKARVVVIPGTAFGKAGEGYIRIS--YAT---SKEKLIEAMERM 384 (391)
T ss_pred HHHHHHHHHhCCEEEcCchhhCCCCCCEEEEE--ecC---CHHHHHHHHHHH
Confidence 34666666 5899998742 1 23678875 332 466788777764
No 197
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=95.39 E-value=0.25 Score=48.22 Aligned_cols=162 Identities=7% Similarity=-0.006 Sum_probs=82.1
Q ss_pred ccceEEehhHhhchhccchh-hhhccc-CCcch------HHHhhc-CCccccceeee-chhHHHhhhhhhhccCCCCccc
Q psy7882 7 RDCGVVVSAVDFGSGDNGTY-LGFQCL-QICRF------VQKDFK-GSFWDKLIVHT-STCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~-fA~e~~-GV~PD------i~KaLg-GG~~PigAv~~-~~eI~d~~~~~~~~~~~~~~hg 76 (329)
+++++|.||+..-|--.+.. ...... ...+. ++|.++ .|+ .+|.+++ .+++.+.+.. .. ...+.
T Consensus 190 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~Gl-RiG~~i~~~~~l~~~~~~--~~---~~~~~ 263 (371)
T PRK05166 190 PETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGL-RVGYGLVSDPELVGLLDR--VR---TPFNV 263 (371)
T ss_pred CCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchh-heeeeecCCHHHHHHHHH--hc---cCCCC
Confidence 47899999998766421111 011111 11112 689998 884 9998664 6778777653 11 11122
Q ss_pred hhhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 77 LKISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 77 ~T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
++++. .++.+++.. +.+++ .+...+.-+++.+.|++ ++. .-....|.++-+.+.. + ...+.
T Consensus 264 ~~~~q-~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~-~~~p~~g~fl~~~~~~--------~---~~~l~ 326 (371)
T PRK05166 264 NGAAQ-AAALAALDDEEHLAKGVALALAERERLKKELAE----MGY-RIAPSRANFLFFDARR--------P---ASAVA 326 (371)
T ss_pred CHHHH-HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CcC-eeCCCcCCEEEEeCCC--------C---HHHHH
Confidence 22221 122333333 34433 22333333444444443 332 1123346665554321 1 24578
Q ss_pred HHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.|.++||++.+... ..+.+|+.-. +.++.+.+++++
T Consensus 327 ~~l~~~gi~v~p~~~~~~~~~iRi~~~------~~~~~~~l~~~l 365 (371)
T PRK05166 327 EALLRQGVIVKPWKQPGFETFIRVSIG------SPEENDHFVAAL 365 (371)
T ss_pred HHHHHCCeEEecCCCCCCCCeEEEEcC------CHHHHHHHHHHH
Confidence 888899999987521 2456776532 355667766654
No 198
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=95.37 E-value=0.16 Score=49.80 Aligned_cols=153 Identities=12% Similarity=0.089 Sum_probs=84.2
Q ss_pred ceEEehhHhhchhccchhh-hhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 9 CGVVVSAVDFGSGDNGTYL-GFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 9 iLLI~DEVqTGfGRTG~~f-A~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.++|+||+...|-.-+..- ......-.+. ++|.++ .|+ =+|.+++.+++.+.+.. .. .+++
T Consensus 184 ~~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl-RiG~~i~~~~~~~~l~~--~~--------~~~~ 252 (366)
T PRK01533 184 TLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASF-RVGYAVGHEELIEKLNV--VR--------LPFN 252 (366)
T ss_pred CEEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHH-HHhHHhCCHHHHHHHHH--hc--------CCCC
Confidence 4677899998774222100 0011111111 679998 774 78988899988887763 11 1123
Q ss_pred cc-H---HHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-V---RPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-l---A~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
.+ + +..++++. +.++ ++.+.-..-++.+.++.+.++. .-....|.++-+.+. + ...+..
T Consensus 253 ~~~~~q~aa~~~l~~~~~~~---~~~~~~~~~r~~~~~~l~~~g~-~~~~~~~nf~~~~~~-~-----------~~~~~~ 316 (366)
T PRK01533 253 VSSLAQKAATIAFGDDEFIE---EIVRVNTEGLRQYESFCKENEI-PFYQSQTNFIFLPVE-N-----------GGEIYE 316 (366)
T ss_pred cCHHHHHHHHHHhCCHHHHH---HHHHHHHHHHHHHHHHHHhCCC-ccCCCcCcEEEEeCC-C-----------HHHHHH
Confidence 33 2 23333433 3332 2333323333344444443332 112344666666552 1 235788
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|.++||++++. ++.+|+. + .+.+|.+.+++++
T Consensus 317 ~l~~~GI~Vr~~---~~~iRis----~--~~~~~~~~l~~al 349 (366)
T PRK01533 317 ACAHAGFIIRPF---PNGVRIT----V--GTREQNEGVISVL 349 (366)
T ss_pred HHHHCCcEEccC---CCceEEe----C--CCHHHHHHHHHHH
Confidence 899999999974 4567764 2 2689999999986
No 199
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=95.36 E-value=0.23 Score=48.65 Aligned_cols=171 Identities=7% Similarity=-0.022 Sum_probs=88.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcc--h-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICR--F-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~P--D-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~ 74 (329)
..||+++|.||+..-|-..+...........+ + ++|.++ .|+ =+|.+++.+++.+.+.. ... ..
T Consensus 195 ~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~Gl-RiG~~v~~~~li~~l~~--~~~---~~ 268 (388)
T PRK07366 195 QQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGF-RIGFAIGNAQLIQALRQ--VKA---VV 268 (388)
T ss_pred HHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcch-hheehcCCHHHHHHHHH--HHh---hc
Confidence 35789999999988774333210000111112 2 679995 774 78999999999887753 110 11
Q ss_pred cchhhhcc-HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHH
Q psy7882 75 HKLKISDT-VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHM 150 (329)
Q Consensus 75 hg~T~agn-lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~ 150 (329)
+.++++.. .++.+++.. +.+++ .+..++.-+++.+.|++ ++.....-.-|+++-+.+... ++. -.
T Consensus 269 ~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~----~~~~~~~p~~g~f~~~~~~~~------~~~-~~ 337 (388)
T PRK07366 269 DFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQ----IGWPVPLPEATMYVWAKLPEP------WQG-NS 337 (388)
T ss_pred ccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCeeEEEEEECCcc------cCC-CH
Confidence 11222211 222333332 33333 33344444444444443 332111223467777776421 000 02
Q ss_pred HHHHHHH-HHCCceeeccC---C-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSC-KEHGLLLGRGG---L-SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l-~e~GVLl~~~G---~-~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+...+ .++||++.++. . ..+.+||. +.. +++++++.++..
T Consensus 338 ~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~~---~~~~l~~~l~rl 384 (388)
T PRK07366 338 VEFCTQLVAQTGVAASPGSGFGKSGEGYVRFA--LVH---DPDILEEAVERI 384 (388)
T ss_pred HHHHHHHHHhCCEEEeCchHhCcCCCCeEEEE--ecC---CHHHHHHHHHHH
Confidence 3466666 46799998852 1 13567874 222 478888888764
No 200
>PRK07582 cystathionine gamma-lyase; Validated
Probab=95.23 E-value=0.24 Score=48.82 Aligned_cols=114 Identities=15% Similarity=0.075 Sum_probs=58.2
Q ss_pred cccceEEehhHhh-chhccchhhhhcccCCcch-----HHHhhcCC-ccccceeeec-hhHHHhhhhhhhccCCCCccch
Q psy7882 6 YRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF-----VQKDFKGS-FWDKLIVHTS-TCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 6 ~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD-----i~KaLgGG-~~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
.+|+++|+||++. +.|. ....+..| +.|.++|. -+.+|.++++ +++.+.+.. ... ..+...+
T Consensus 160 ~~g~~lvVD~t~~~~~~~-------~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~--~~~-~~g~~~~ 229 (366)
T PRK07582 160 AAGALLVVDNTTATPLGQ-------RPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVER--WRL-LAGAIPG 229 (366)
T ss_pred HcCCEEEEECCCCCcccc-------CchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHH--HHH-HhCCCCC
Confidence 4699999999973 3321 11123357 35999762 1245766664 666665542 100 0011112
Q ss_pred hhhccHHHHHHHHhhHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE------------------eeceeeEEEee
Q psy7882 78 KISDTVRPHVQIKKSVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR------------------GKGLMIGVDLV 136 (329)
Q Consensus 78 T~agnlA~aaala~~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR------------------G~GLm~gIef~ 136 (329)
.+.+.+ ++.++++ ++- +++..+.+..+.+.|+ +||.|..|. |.|.|+.|++.
T Consensus 230 ~~~a~l-~~r~l~t--l~~R~~~~~~na~~la~~L~----~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~ 300 (366)
T PRK07582 230 PFEAWL-AHRSLGT--LGLRFARQCANALAVAELLA----GHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA 300 (366)
T ss_pred HHHHHH-HHhcccc--HHHHHHHHHHHHHHHHHHHH----hCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC
Confidence 222111 1122333 211 4555566666655555 355554444 68899999994
No 201
>PRK05942 aspartate aminotransferase; Provisional
Probab=95.10 E-value=0.59 Score=46.04 Aligned_cols=167 Identities=11% Similarity=0.025 Sum_probs=82.8
Q ss_pred ccccceEEehhHhhchhccch----hhhhcc-cCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT----YLGFQC-LQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~----~fA~e~-~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..|++++|.||+...|-..|. ...... .+..=. ++|.++ .| +=+|.+++++++.+.+.. ... ...
T Consensus 200 ~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~G-lRiG~i~~~~~l~~~l~~--~~~---~~~ 273 (394)
T PRK05942 200 RKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAG-WRVGFVVGNRHIIQGLRT--LKT---NLD 273 (394)
T ss_pred HHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChh-hheeeeecCHHHHHHHHH--HHh---hcc
Confidence 357999999999775532221 111110 011111 579985 66 378989999999887763 110 001
Q ss_pred chhhhcc-HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChHHH
Q psy7882 76 KLKISDT-VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSRHM 150 (329)
Q Consensus 76 g~T~agn-lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~~~ 150 (329)
.++.+.. .++.+++.. +.+++ .++.++.-+++.+.|++ ++. .-+.. -|+++-+.+... .+ .
T Consensus 274 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~-~~~~~~~~~f~~~~~~~~------~~---~ 339 (394)
T PRK05942 274 YGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGE----LGW-NIPPTKATMYLWVPCPVG------MG---S 339 (394)
T ss_pred cCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCC-eecCCCeeeEEEEECCCC------CC---H
Confidence 1111122 333444432 22222 33344444445444443 332 11222 344565666321 11 1
Q ss_pred HHHHH-HHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882 151 THILD-SCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDC 196 (329)
Q Consensus 151 ~~~~~-~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~ 196 (329)
..+.. .+.++||++.++.. ..+.+|+.-. . +.+.+.+.++.
T Consensus 340 ~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~---~--~~~~l~~~l~~ 385 (394)
T PRK05942 340 TDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI---A--DCDRLGEALDR 385 (394)
T ss_pred HHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec---C--CHHHHHHHHHH
Confidence 23444 44578999977421 2468888753 1 35566666654
No 202
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=95.04 E-value=0.57 Score=45.77 Aligned_cols=166 Identities=11% Similarity=-0.092 Sum_probs=82.9
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---H--HHhhcCCccccceeeechhHHHhhhhhhhccC-CCCccchh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---V--QKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL-KTPAHKLK 78 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i--~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~-~~~~hg~T 78 (329)
..+|+++|+|++|. +|.. ........+| + -|. . |-.-+|++..+++.. +.+...+.. ......+|
T Consensus 167 ~~~g~~~ivD~a~~-~g~~----~~~~~~~~~D~~~~s~~K~-~-gp~G~g~l~vr~~~~--~~p~~~g~~~~~~~~~gt 237 (382)
T TIGR03403 167 KERGVLFHTDAVQA-IGKI----PVDVQKAGVDFLSFSAHKF-H-GPKGVGGLYIRKGVE--LTPLFHGGEHMGGRRSGT 237 (382)
T ss_pred HHcCCEEEEechhh-cCCC----ccCccccCCCEEEEcchhh-C-CCCceEEEEECCCCC--CCCcccCCCCCCCcccCC
Confidence 45799999999987 3211 1111122357 2 294 3 321267777776531 111000000 00011222
Q ss_pred hhcc--HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-----eceeeEEEeecCCCCCCCCChH
Q psy7882 79 ISDT--VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-----KGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 79 ~agn--lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-----~GLm~gIef~~d~~~~~p~~~~ 148 (329)
.+.. +++++++.. +.++. .++.+.+.++|.++|.++ +.+ .+-+ .+-+..+.+.. .
T Consensus 238 ~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~----~~~-~~~~~~~~~~~~~~~~~~~~-~--------- 302 (382)
T TIGR03403 238 LNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLEL----PDV-FVVGDREHRVPNTILISIKG-V--------- 302 (382)
T ss_pred cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC----CCE-EEECCCCCCcCCEEEEEeCC-C---------
Confidence 2222 344444432 22332 455666666666666543 322 1211 12233444421 0
Q ss_pred HHHHHHHHHHHCCceeec---cC--------------C----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCKEHGLLLGR---GG--------------L----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~e~GVLl~~---~G--------------~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
....+...|.++||.++. |. . ...+||+.+.... |++|||.+++++
T Consensus 303 ~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~---t~~did~~~~~l 369 (382)
T TIGR03403 303 EGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFT---TEEEIDYTIEVF 369 (382)
T ss_pred CHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCC---CHHHHHHHHHHH
Confidence 123466667889999984 21 0 1257999998876 589999999986
No 203
>PRK09148 aminotransferase; Validated
Probab=94.93 E-value=0.43 Score=47.35 Aligned_cols=171 Identities=4% Similarity=-0.104 Sum_probs=88.3
Q ss_pred cccceEEehhHhhchhccchhhh-hcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLG-FQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA-~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
+||+++|.||+...|...+..+. ...+.-.+| ++|.++ -|+ =+|.+++++++.+.+.. .... .....
T Consensus 196 ~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGl-R~G~~v~~~~~i~~l~~--~~~~-~~~~~ 271 (405)
T PRK09148 196 KHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGW-RMGFAVGNERLIAALTR--VKSY-LDYGA 271 (405)
T ss_pred HcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcch-heeeeeCCHHHHHHHHH--HHHH-hccCC
Confidence 57999999999987632221111 111110123 579997 774 78999999999887753 1100 00111
Q ss_pred hhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 77 LKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 77 ~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
++.+. .++++++.. +.+++ .+..++.-+.+.+.|++ ++. .-+. .-|+++-+.+.... +......
T Consensus 272 ~~~~q-~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~-~~~~p~~g~f~~~~l~~~~------~~~~~~~ 339 (405)
T PRK09148 272 FTPIQ-VAATAALNGPQDCIAEMRELYKKRRDVLVESFGR----AGW-DIPPPAASMFAWAPIPEAF------RHLGSLE 339 (405)
T ss_pred ChHHH-HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----cCC-ccCCCCeeEEEEEECCCcc------CCCCHHH
Confidence 22211 233344432 33332 23344444445444443 332 1122 23666666663211 0001245
Q ss_pred HHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+...++ ++||.+.++.. ..+.+|+.-. . +.+++.+.++..
T Consensus 340 ~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~--~---~~~~l~~al~~l 384 (405)
T PRK09148 340 FSKLLVEKADVAVAPGVGFGEHGDGYVRIALV--E---NEQRIRQAARNI 384 (405)
T ss_pred HHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--C---CHHHHHHHHHHH
Confidence 666665 68999988521 2467888432 2 467888877754
No 204
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=94.93 E-value=0.41 Score=47.15 Aligned_cols=169 Identities=7% Similarity=0.002 Sum_probs=85.5
Q ss_pred ccccceEEehhHhhchhccchh-hhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
.+||+++|.||+...+--.|.. .... ...+| ++|.++ .|+ -+|.+++++++++.+.. .... ...+
T Consensus 196 ~~~~~~ii~D~~y~~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~g~~Gl-RvG~~v~~~~~~~~~~~--~~~~-~~~~ 269 (391)
T PRK07309 196 KKYDIFVISDEVYSELTYTGEPHVSIA--EYLPDQTILINGLSKSHAMTGW-RIGLIFAPAEFTAQLIK--SHQY-LVTA 269 (391)
T ss_pred HHcCcEEEEEccccceeeCCCCCCCHH--HhccCCEEEEecChhhccCccc-eeEEEEeCHHHHHHHHH--HHhh-cccC
Confidence 3579999999998876432321 1111 11234 579986 674 78999999999887763 1100 0111
Q ss_pred chhhhccHHHHHHHHh-hH-HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChHHHH
Q psy7882 76 KLKISDTVRPHVQIKK-SV-LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 76 g~T~agnlA~aaala~-~i-le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
.++.+. .+++.++.. .. ... ..+.++.-+++.+.|+ +++. .-... -|+.+.+.+.... . ....
T Consensus 270 ~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~-~~~~p~gg~~~~~~l~~~~------~-~~~~ 336 (391)
T PRK07309 270 ATTMAQ-FAAVEALTNGKDDALPMKKEYIKRRDYIIEKMT----DLGF-KIIKPDGAFYIFAKIPAGY------N-QDSF 336 (391)
T ss_pred CChHHH-HHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHH----HCCC-eecCCCeeEEEEEECCCCC------C-CCHH
Confidence 122111 233333433 11 111 2233333344444443 3332 11112 2444445543210 0 0123
Q ss_pred HHHHH-HHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDS-CKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~-l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.+. +.++||++.++.. .++.+|+.-. . +.+++++.+++.
T Consensus 337 ~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~----~-~~~~l~~~i~~l 382 (391)
T PRK07309 337 KFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA----A-SMETIKEAMKRL 382 (391)
T ss_pred HHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec----C-CHHHHHHHHHHH
Confidence 46654 5578999987531 2467888522 2 467888888874
No 205
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=94.92 E-value=0.33 Score=47.75 Aligned_cols=167 Identities=9% Similarity=-0.031 Sum_probs=82.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
..||+++|.|++|.-- ......+| .| ..|.++|. ..|+++++++..+.......+..... ..+|
T Consensus 176 ~~~gi~vivD~a~~~~-----~~~~~~~g--~D~~~~S~~K~l~gp--~~G~l~~~~~~i~~~~~~~~~~~~~~-~~~~- 244 (363)
T TIGR01437 176 QEHNLPLIVDAAAEED-----LQKYYRLG--ADLVIYSGAKAIEGP--TSGLVLGKKKYIEWVKLQSKGIGRAM-KVGK- 244 (363)
T ss_pred HHcCCeEEEECCCCCc-----hHHHHHcC--CCEEEEeCCcccCCC--ceEEEEEcHHHHHHHHhccCCCccee-ccCH-
Confidence 4579999999999611 11111234 36 24998764 37888888777665432001100001 1111
Q ss_pred hcc-HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE---Eeece---eeEEEeecCCCCCCCCChHH
Q psy7882 80 SDT-VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV---RGKGL---MIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 80 agn-lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V---RG~GL---m~gIef~~d~~~~~p~~~~~ 149 (329)
.+ +++.++++. +.-.+ ++...+.-+++.++|.++ |.+.-. ...|. ...|.|...... . .
T Consensus 245 -~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i----~g~~~~~~~~~~~~~~~~~~v~~~~~~~g---~---~ 313 (363)
T TIGR01437 245 -ENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNTL----KGVSASIVQDEAGRDIARAEIRFDESELG---M---T 313 (363)
T ss_pred -HHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhcC----CCeEEEEecCCCCCcCceEEEEEeccCCC---C---C
Confidence 12 344444432 11101 222223333455555543 222111 11111 133444321100 1 1
Q ss_pred HHHHHHHHHHCC--ceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHG--LLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~G--VLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|.++| |+.++.......+++.|+. . +++|+|.+++++
T Consensus 314 ~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~-~---~~~e~~~~~~~l 359 (363)
T TIGR01437 314 AADVVQALRQGEPAIYTRGYKANEGIIEIDPRS-V---TGGQLDIIVERI 359 (363)
T ss_pred HHHHHHHHhcCCCCEEEeeeeecCCeEEEEeec-C---CHHHHHHHHHHH
Confidence 456888888777 7777533345688888884 3 478999999875
No 206
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=94.91 E-value=0.27 Score=47.46 Aligned_cols=54 Identities=9% Similarity=0.062 Sum_probs=36.9
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIK 64 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~ 64 (329)
+++++|.||+...|.. ..... ...-.|. ++|.++ .|+ =+|.+++++++.+.+..
T Consensus 168 ~~~~ii~De~y~~~~~-~~~~~--~~~~~~~vi~l~S~SK~~~l~Gl-RiG~iv~~~~~i~~~~~ 228 (337)
T PRK03967 168 TGKPVVLDEAYAEFSG-KSLIG--LIDEYPNLILLRTFSKAFGLAGI-RAGYAIANEEIIDALYR 228 (337)
T ss_pred cCCEEEEECchhhhcc-cchHH--HHhhCCCEEEEecchHhhcchhh-hheeeecCHHHHHHHHh
Confidence 5899999999988742 12111 1111122 679998 884 89999999988887763
No 207
>PRK06767 methionine gamma-lyase; Provisional
Probab=94.81 E-value=0.11 Score=51.47 Aligned_cols=138 Identities=11% Similarity=-0.028 Sum_probs=73.5
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
..+|+++|+||.+. .+-.+.-. .+| .| +.|.++|.-.++ |+++++++..+..... .. ...|+.
T Consensus 173 ~~~g~~vivD~a~a-~~~~~~pl---~~g--~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~-~~----~~~g~~ 241 (386)
T PRK06767 173 KRNGLLVIVDNTFC-SPYLQRPL---ELG--CDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRP-MR----KDIGGI 241 (386)
T ss_pred HHcCCEEEEECCCc-ccccCCch---hcC--CcEEEecCcceecCCCCceeEEEEeChHHHHHHHHH-HH----HHhCCC
Confidence 35799999999974 11111111 123 36 359998743476 7788888766543210 00 011222
Q ss_pred hhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE------------eeceeeEEEeecCCCCCCC
Q psy7882 79 ISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR------------GKGLMIGVDLVQDKETKVP 144 (329)
Q Consensus 79 ~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR------------G~GLm~gIef~~d~~~~~p 144 (329)
.+. ..+..++.. +.+.. +++.++...++.+.|+ ++|.+..|. |.|-|+.+++..+
T Consensus 242 ~~~-~~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~----~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~------ 310 (386)
T PRK06767 242 MAP-FDAWLLLRGLKTLAVRMDRHCDNAEKIVSFLK----NHDAVEGVWYPEGELASRQMKRGGGVISFSIKGG------ 310 (386)
T ss_pred CCH-HHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHH----cCCCccEEECCCcHHHHHhCCCCCceEEEEEcCC------
Confidence 211 222223332 22221 4555666666666554 455554443 7788999998521
Q ss_pred CChHHHHHHHHHHHHCCceeec
Q psy7882 145 LNSRHMTHILDSCKEHGLLLGR 166 (329)
Q Consensus 145 ~~~~~~~~~~~~l~e~GVLl~~ 166 (329)
.+...+|++.|...++-+.-
T Consensus 311 --~~~~~~f~~~l~~~~~~~s~ 330 (386)
T PRK06767 311 --KEETQAFINDLHFITIAVSL 330 (386)
T ss_pred --HHHHHHHHHhCCccEEecCC
Confidence 13356688887766655544
No 208
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=94.80 E-value=0.11 Score=50.94 Aligned_cols=114 Identities=14% Similarity=0.009 Sum_probs=62.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeeech-hHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHTST-CTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~~~-eI~d~~~~~~~~~~~~~~hg~ 77 (329)
..+|+++|+|+.+... .+ +......+| +.|.++|.- ...|++++++ ++++.+.. .. ...|.
T Consensus 152 ~~~g~~livD~t~~~~----~~--~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~--~~----~~~g~ 219 (369)
T cd00614 152 HEHGALLVVDNTFATP----YL--QRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRF--LR----LALGT 219 (369)
T ss_pred HHcCCEEEEECCCcch----hc--CChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHH--HH----HhhCC
Confidence 4579999999986422 11 122233457 459998742 3568888877 77776553 10 01122
Q ss_pred hhhcc-HHHHHHHHh-hHHh-HHHHHHHHHHHHHHHHHHHHHhCCceee------------------EEeeceeeEEEee
Q psy7882 78 KISDT-VRPHVQIKK-SVLE-RFVHTYVVGNFLLTHLSKLREEFAIVGD------------------VRGKGLMIGVDLV 136 (329)
Q Consensus 78 T~agn-lA~aaala~-~ile-~le~v~~lG~~L~~gL~eL~~~~p~v~~------------------VRG~GLm~gIef~ 136 (329)
..+ ..+..++.. +.+. ++++..+...++.+.|++ +|.+.. ..|.|.|+.|++.
T Consensus 220 --~~~p~~a~~~l~~l~tl~~r~~~~~~na~~la~~L~~----~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~ 293 (369)
T cd00614 220 --ILSPFDAWLLLRGLKTLPLRMERHSENALKVAEFLEK----HPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELK 293 (369)
T ss_pred --CCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc----CCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeC
Confidence 222 344343333 2222 245555555566555543 332222 2477999999985
No 209
>PRK12414 putative aminotransferase; Provisional
Probab=94.77 E-value=0.56 Score=46.09 Aligned_cols=170 Identities=5% Similarity=-0.103 Sum_probs=84.1
Q ss_pred cccceEEehhHhhchhccchhh-hhc-ccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYL-GFQ-CLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~f-A~e-~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
+|++++|.||+..-+.-.|... ... +.+.... ++|.++ .|+ =+|.+++++++.+.+.. .... ...+.
T Consensus 193 ~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGl-RiG~~v~~~~l~~~l~~--~~~~-~~~~~ 268 (384)
T PRK12414 193 NTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGW-RVGYCLAPAELMDEIRK--VHQF-MVFSA 268 (384)
T ss_pred HCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccc-eEEEEecCHHHHHHHHH--HHhh-eecCC
Confidence 5799999999987653223211 111 1111111 679996 774 78999999998877653 1100 01112
Q ss_pred hhhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882 77 LKISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMTHI 153 (329)
Q Consensus 77 ~T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~~~ 153 (329)
++++. .++..++.. ..+.+ .+..++.-+.+.+.|++ ++. .-.... |+++.+.+..-.. .....+
T Consensus 269 s~~~q-~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~-~~~~~~gg~~~~~~~~~~~~-------~~~~~~ 335 (384)
T PRK12414 269 DTPMQ-HAFAEALAEPASYLGLGAFYQRKRDLLARELAG----SRF-ELLPSEGSFFMLARFRHFSD-------ESDSDF 335 (384)
T ss_pred CcHHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHh----CCC-eecCCCcceEEEEcccccCC-------CCHHHH
Confidence 22211 223333433 22211 22334444444444443 332 112233 4555556632100 011234
Q ss_pred H-HHHHHCCceeeccCC------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 L-DSCKEHGLLLGRGGL------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~-~~l~e~GVLl~~~G~------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
. ..+.++||.+.++.. ..+.+|+.= .. +++++++.++.+
T Consensus 336 ~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~--~~---~~~~~~~~~~rl 381 (384)
T PRK12414 336 VLRLIRDARVATIPLSAFYTDGTDTGLIRLSF--SK---DDATLVEGARRL 381 (384)
T ss_pred HHHHHHhCCEEEecchhhcCCCCCCCEEEEEe--cC---CHHHHHHHHHHH
Confidence 4 556789999988531 135677742 22 478888888753
No 210
>PRK05957 aspartate aminotransferase; Provisional
Probab=94.76 E-value=0.63 Score=45.81 Aligned_cols=171 Identities=11% Similarity=-0.025 Sum_probs=87.5
Q ss_pred ccccceEEehhHhhchhccch-hhhh-cccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT-YLGF-QCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~-~fA~-e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..+|+++|.||+...|-..+. .... ...+..+- ++|.++ .|+ -+|.+++.+++++.+.. ... .....
T Consensus 190 ~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG~~~~~~~~~~~~~~--~~~-~~~~~ 265 (389)
T PRK05957 190 AEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASW-RIGYMVIPIHLLEAIKK--IQD-TILIC 265 (389)
T ss_pred HHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccc-eeEEEecCHHHHHHHHH--HHh-hcccC
Confidence 357999999999876643221 1111 11111111 679996 664 78999999999888764 110 00011
Q ss_pred chhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-Eee-ceeeEEEeecCCCCCCCCChHHH
Q psy7882 76 KLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGK-GLMIGVDLVQDKETKVPLNSRHM 150 (329)
Q Consensus 76 g~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~-GLm~gIef~~d~~~~~p~~~~~~ 150 (329)
.++++. .+...+++. +.+++ .+++++.-+.+.+.|++ .+.+..+ ... |+++-+++..+. + .
T Consensus 266 ~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~~~~gg~~~~~~~~~~~------~---~ 331 (389)
T PRK05957 266 PPVVSQ-YAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQ----LQDRCTLHPANGAFYCFLKVNTDL------N---D 331 (389)
T ss_pred CCcHHH-HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh----cCCCccccCCCeeEEEEEeCCCCC------C---h
Confidence 111111 222334443 34444 33344443444444443 3322112 122 555666663211 1 3
Q ss_pred HHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.++.+.|. ++||++.+... .++.+|+.=. ..+++++.+.++..
T Consensus 332 ~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~----~~~~~~l~~~~~~l 379 (389)
T PRK05957 332 FELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYG----ALQKATAKEGIERL 379 (389)
T ss_pred HHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEe----cCCHHHHHHHHHHH
Confidence 45777776 58999988421 1346777521 12467788877764
No 211
>KOG1357|consensus
Probab=94.70 E-value=0.15 Score=51.86 Aligned_cols=56 Identities=9% Similarity=-0.054 Sum_probs=39.6
Q ss_pred cccccceEEehhHhhc--hhccchhhhhcccCCcch-----HH---HhhcCCccccceeeechhHHHhhh
Q psy7882 4 TYYRDCGVVVSAVDFG--SGDNGTYLGFQCLQICRF-----VQ---KDFKGSFWDKLIVHTSTCTFENFI 63 (329)
Q Consensus 4 ~~~~giLLI~DEVqTG--fGRTG~~fA~e~~GV~PD-----i~---KaLgGG~~PigAv~~~~eI~d~~~ 63 (329)
-.|+.+.|++||-.++ .|+||. +.++++|+.|. ++ |..+++. |-+.+++++-+.+.
T Consensus 302 kkkykayl~lDEAHSiGA~g~tGr-gvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk~lid~lr 367 (519)
T KOG1357|consen 302 KKKYKAYLYLDEAHSIGAMGATGR-GVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSKELIDYLR 367 (519)
T ss_pred hccccEEEEeeccccccccCCCCc-ceeeccCCCchhheeecceehhhccccc---ceecCcHHHHhhhc
Confidence 4577899999998873 456774 68999999984 22 6655432 33678888887654
No 212
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=94.64 E-value=0.33 Score=49.85 Aligned_cols=90 Identities=10% Similarity=-0.036 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccC-------C
Q psy7882 97 FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG-------L 169 (329)
Q Consensus 97 le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G-------~ 169 (329)
.+++.++.++|+++|++. .+..+..-. .--+..|+|.... . ....+.+.|.+.||++.... .
T Consensus 316 ~~~~~~na~~L~~~L~~~--G~~l~~~~t-~~hi~lv~~~~~g-----i---~~~~~~~~L~~~~I~~nk~~~p~~~~~~ 384 (475)
T PLN03226 316 QKQVKANAAALANRLMSK--GYKLVTGGT-DNHLVLWDLRPLG-----L---TGSRVEKVLDLAHITLNKNAVPGDSSAL 384 (475)
T ss_pred HHHHHHHHHHHHHHHHhC--CCEEEcCCC-CCCEEEEEccCCC-----C---CHHHHHHHHHHCCCEECCCCCCCCcccC
Confidence 567888888888887763 232222100 1234555653211 0 12346677778999886521 1
Q ss_pred CCCEEEEeCc-cccCcCCHHHHHHHHhcc
Q psy7882 170 SGNTLTALQP-KLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 170 ~~nvIrl~PP-L~It~~t~eeId~~l~~~ 197 (329)
.+..||+..| ++.--++++|++++.+..
T Consensus 385 ~~~giRiGt~~lt~~g~~~~d~~~ia~~i 413 (475)
T PLN03226 385 VPGGVRIGTPAMTSRGLVEKDFEKVAEFL 413 (475)
T ss_pred CCCCcccCcHHHHHCCCCHHHHHHHHHHH
Confidence 3456787544 444456789999998874
No 213
>PRK08636 aspartate aminotransferase; Provisional
Probab=94.59 E-value=0.58 Score=46.27 Aligned_cols=172 Identities=6% Similarity=-0.031 Sum_probs=86.2
Q ss_pred ccccceEEehhHhhchhccchh-hhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
.+|++++|.||+...+--.|.. -......-.+| ++|.++ .| +=+|.+++++++.+.+.. .... ....
T Consensus 205 ~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-lRiG~iv~~~~li~~~~~--~~~~-~~~~ 280 (403)
T PRK08636 205 KKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAG-WRVGFVVGNKKLVGALKK--IKSW-LDYG 280 (403)
T ss_pred HHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCcc-ceeeeeeCCHHHHHHHHH--HHHH-hccc
Confidence 4679999999998866322211 11111110123 579994 77 489999999999887653 1100 0011
Q ss_pred chhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCCCCCCChHHHH
Q psy7882 76 KLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 76 g~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
.++... .++..++.. +.+++ .+..++.-+.+.+.|+ +++. ..+. .-|+++.+.+.+.. +.....
T Consensus 281 ~~~~~q-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~-~~~~p~~g~~~~~~l~~~~------~~~~~~ 348 (403)
T PRK08636 281 MFTPIQ-VAATIALDGDQSCVEEIRETYRKRRDVLIESFA----NAGW-ELQKPRASMFVWAKIPEPA------RHLGSL 348 (403)
T ss_pred CChHHH-HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH----HCCC-cccCCCcceEEEEECCCcc------CCCCHH
Confidence 122222 222233321 22222 1222333333333333 3332 2122 34677777764211 000124
Q ss_pred HHHHHHH-HCCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDSCK-EHGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~-e~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+...++ ++||.+.+.. ...+.+||. +. .+++++.+.++..
T Consensus 349 ~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~--~~---~~~~~l~~~~~rl 394 (403)
T PRK08636 349 EFSKQLLTEAKVAVSPGIGFGEYGDEYVRIA--LI---ENENRIRQAARNI 394 (403)
T ss_pred HHHHHHHHhCCEEEecchhhCcCCCCeEEEE--ec---CCHHHHHHHHHHH
Confidence 4666544 6899998852 124678874 22 2578888888764
No 214
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=94.59 E-value=0.6 Score=47.41 Aligned_cols=174 Identities=11% Similarity=0.036 Sum_probs=86.6
Q ss_pred ccccceEEehhHhhchhccchhh-hh----cccCC-c-ch-------HHHhhc-CCccccceeee-chhHHHhhhhhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYL-GF----QCLQI-C-RF-------VQKDFK-GSFWDKLIVHT-STCTFENFIKIKYQ 68 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~f-A~----e~~GV-~-PD-------i~KaLg-GG~~PigAv~~-~~eI~d~~~~~~~~ 68 (329)
..|++.+|.||+...+-..+.-| .. ...+. . |+ ++|.++ .|+ =+|.+++ .+++.+.+.. ..
T Consensus 230 ~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~Gl-RvG~ivs~n~~l~~~~~~--~~ 306 (447)
T PLN02607 230 VRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGF-RVGTIYSYNDKVVTTARR--MS 306 (447)
T ss_pred HHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcc-eEEEEEEcCHHHHHHHHH--Hh
Confidence 45799999999998732222111 11 11121 1 44 579997 785 7898887 5566655432 10
Q ss_pred cCCCCccchhhhccHHHHHHHHh-hHHhH-HH----HHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCC
Q psy7882 69 ILKTPAHKLKISDTVRPHVQIKK-SVLER-FV----HTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKET 141 (329)
Q Consensus 69 ~~~~~~hg~T~agnlA~aaala~-~ile~-le----~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~ 141 (329)
.+...++.+. .++++.+.. +.+++ ++ ++++.-+.+.+.|+ ++++ ..+++ -|+++-+++.....
T Consensus 307 ---~~~~~s~~~q-~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~----~~gi-~~~~~~ag~fvw~~L~~~~~- 376 (447)
T PLN02607 307 ---SFTLVSSQTQ-HLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLR----RAGI-ECLKGNAGLFCWMNLSPLLE- 376 (447)
T ss_pred ---hcCCCCHHHH-HHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHH----hCCC-CcccCCeeEEEEEEchHhhc-
Confidence 0111122221 333444554 44332 11 12222223333333 3443 22333 47888888843110
Q ss_pred CCCCChHHHHHHHHHHHH-CCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCKE-HGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~e-~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+ ..+...+++..+++ .||++.|... ..+.+|+. .+..+++++++.++..
T Consensus 377 -~~-~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~----fa~~~~~~l~~gl~Ri 431 (447)
T PLN02607 377 -TP-TREGELALWDSILREVKLNISPGSSCHCSEPGWFRVC----FANMSEDTLEVALKRI 431 (447)
T ss_pred -CC-CchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEE----eccCCHHHHHHHHHHH
Confidence 00 01223456666665 7999987421 24566663 2222478888888764
No 215
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=94.52 E-value=0.69 Score=46.61 Aligned_cols=171 Identities=13% Similarity=0.015 Sum_probs=95.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcchH---H--HhhcCCccccceeeechhHHHhhhhhhhc--cCC------
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV---Q--KDFKGSFWDKLIVHTSTCTFENFIKIKYQ--ILK------ 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi---~--KaLgGG~~PigAv~~~~eI~d~~~~~~~~--~~~------ 71 (329)
..+|+++++|=+|. .| . ...+.-.+..|+ + |.|.|-. .+|++.+++++.+.+.+-..+ +..
T Consensus 189 ~~~ga~v~VDaaq~-~~-h---~~idv~~l~~Df~afsgHKwl~gP~-GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~ 262 (405)
T COG0520 189 HEHGALVLVDAAQA-AG-H---LPIDVQELGCDFLAFSGHKWLLGPT-GIGVLYVRKELLEELEPFLGGGGMIEYVSRDE 262 (405)
T ss_pred HHcCCEEEEECccc-cC-c---cCCCchhcCCCEEEEcccccccCCC-ceEEEEEchHHHhhcCCcccCCCceeeecccc
Confidence 35789999998887 21 1 122222234562 2 9887752 689999999999876430000 000
Q ss_pred --------CCccchhhhcc--HHHHHHHHhhHHhH--HHHHHHHHHHHHHHHHHHHHhCCceeeE----EeeceeeEEEe
Q psy7882 72 --------TPAHKLKISDT--VRPHVQIKKSVLER--FVHTYVVGNFLLTHLSKLREEFAIVGDV----RGKGLMIGVDL 135 (329)
Q Consensus 72 --------~~~hg~T~agn--lA~aaala~~ile~--le~v~~lG~~L~~gL~eL~~~~p~v~~V----RG~GLm~gIef 135 (329)
.-.-++|..-. ++..++++ .+++ ++++.+....|.+.+.+..+..|.+.-. ..++.++++.+
T Consensus 263 ~~~~~~~p~rfe~gTpn~~~~i~l~aAl~--~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v 340 (405)
T COG0520 263 GVTLAELPLRFEAGTPNIAGAIGLAAALD--YLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNV 340 (405)
T ss_pred cccccCcchhhccCCchHHHHHhHHHHHH--HHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEe
Confidence 00112333222 33333433 3333 4445555555555444444444533111 13566677666
Q ss_pred ecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCC-----------CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 136 VQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLS-----------GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 136 ~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~-----------~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
... ....+...+-++||.++. |++ ...+|+.+.+-- |++|||.+++++
T Consensus 341 ~~~----------~~~dv~~~L~~~gI~vr~-g~~ca~p~~~~~~~~~~iR~S~~~YN---t~edid~l~~aL 399 (405)
T COG0520 341 KGI----------HPHDVATLLDEKGIAVRA-GHHCAQPLHRLLGVDATIRASLHLYN---TEEDVDRLLEAL 399 (405)
T ss_pred CCC----------CHHHHHHHHHhCCeEEEe-ccccccHHHHhcCCCCceEEEEeecC---CHHHHHHHHHHH
Confidence 421 245688889999977765 321 233899988766 589999999985
No 216
>PRK07683 aminotransferase A; Validated
Probab=94.51 E-value=0.71 Score=45.40 Aligned_cols=168 Identities=8% Similarity=-0.013 Sum_probs=83.7
Q ss_pred cccceEEehhHhhchhccchhhhhccc-CCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCL-QICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~-GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
.+|+++|.||+...+-..+.......+ +. |+ ++|.++ -|+ =+|.+++++++.+.+.. .... .....
T Consensus 192 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~s~SK~~~~pGl-RiG~i~~~~~l~~~~~~--~~~~-~~~~~ 266 (387)
T PRK07683 192 DKNIFVLSDEIYSELVYEQPHTSIAHFPEM-REKTIVINGLSKSHSMTGW-RIGFLFAPSYLAKHILK--VHQY-NVTCA 266 (387)
T ss_pred HcCeEEEEecccccceeCCCcCChhhccCC-cCCeEEEeeccccccCccc-eeEEEEcCHHHHHHHHH--HHHh-ccCCC
Confidence 468999999999876322211111111 22 33 579998 774 88999999998887753 1100 01111
Q ss_pred hhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 77 LKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 77 ~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
++++. .++.+.+.. ..+++ .++.++.-+.+.+.|.+ ++. .-.... |+++.+.+.... .+ ...
T Consensus 267 ~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~-~~~~~~~~~~~~~~~~~~~-----~~---~~~ 332 (387)
T PRK07683 267 SSISQ-YAALEALTAGKDDAKMMRHQYKKRRDYVYNRLIS----MGL-DVEKPTGAFYLFPSIGHFT-----MS---SFD 332 (387)
T ss_pred ChHHH-HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----cCC-cccCCCeeEEEEEecccCC-----CC---HHH
Confidence 22211 222333433 22222 22333444444444443 232 111233 444444443211 01 123
Q ss_pred HHHH-HHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDS-CKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~-l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+... +.++||++.++.. ..+.+||. +.. +++++.+.++..
T Consensus 333 ~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~--~~~---~~~~~~~al~~l 377 (387)
T PRK07683 333 FALDLVEEAGLAVVPGSAFSEYGEGYVRLS--YAY---SIETLKEGLDRL 377 (387)
T ss_pred HHHHHHHhCCEEEcCchhhCCCCCCeEEEE--ecC---CHHHHHHHHHHH
Confidence 5444 5678999988531 24678874 332 477888888764
No 217
>PRK08354 putative aminotransferase; Provisional
Probab=94.46 E-value=0.9 Score=43.30 Aligned_cols=148 Identities=9% Similarity=-0.008 Sum_probs=74.2
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
.+|+++|.||+..+|..-+. ...++ ++|.++ .|+ -+|.+++ +.+.+.. .....
T Consensus 148 ~~~~~li~De~y~~f~~~~~-------~~~~~~vi~~~S~SK~~~l~Gl-RiG~~v~---~~~~l~~--------~~~~~ 208 (311)
T PRK08354 148 DRNALLILDEAFIDFVKKPE-------SPEGENIIKLRTFTKSYGLPGI-RVGYVKG---FEEAFRS--------VRMPW 208 (311)
T ss_pred hcCcEEEEeCcchhcccccc-------ccCCCcEEEEeccHhhcCCccc-eeeeeee---hHHHHHH--------cCCCc
Confidence 57999999999988843221 11233 689998 884 8887777 3344432 01111
Q ss_pred hhhcc-HHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 78 KISDT-VRPHVQIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 78 T~agn-lA~aaala~~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
+.+.. .+.+.++..+- .+++++.-+.+.+..+.+.... .+.+.|.++-+++.. ...+.+.
T Consensus 209 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~l----~~~~~~~~~~~~~~~------------~~~~~~~ 269 (311)
T PRK08354 209 SIGSTGYAFLEFLIEDD---FEHLRKTMPLIWREKERFEKAL----YVKSDANFFIKDVGD------------AEKFVEF 269 (311)
T ss_pred cCCHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHhc----CCCCCCcEEEEECCC------------HHHHHHH
Confidence 11111 22222221111 2223333333444444332211 123444444454321 2347778
Q ss_pred HHHCCceeeccCCC--CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLS--GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~--~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|.++||++.++... ++.+||.- . +.++.+.+++++
T Consensus 270 l~~~gv~v~~g~~f~~~~~iRi~~----~--~~~~~~~l~~al 306 (311)
T PRK08354 270 LKRNGILVRDCTSFGLPGYIRFSV----R--DREENEKLIRAL 306 (311)
T ss_pred HHHCCeEEEecccCCCCCeEEEEe----C--CHHHHHHHHHHH
Confidence 89999999986422 35666642 1 345566666553
No 218
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=94.42 E-value=0.39 Score=47.31 Aligned_cols=170 Identities=10% Similarity=-0.045 Sum_probs=91.1
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch-HHHhhcCCccc-cceeeechhHHHhhhhh-h-h---c-cCCCCccchh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-VQKDFKGSFWD-KLIVHTSTCTFENFIKI-K-Y---Q-ILKTPAHKLK 78 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-i~KaLgGG~~P-igAv~~~~eI~d~~~~~-~-~---~-~~~~~~hg~T 78 (329)
+|+++|+|=||+ +|- .-.-.+.+++--= --|.+ | .| +|++.++++..+.+.+. . + . ........+|
T Consensus 165 ~g~l~vVDavss-~g~--~~idv~~~d~~~~ssqK~l--g-P~Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~T 238 (360)
T PRK05355 165 GDVPLVADMSSD-ILS--RPIDVSKFGLIYAGAQKNI--G-PAGLTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNT 238 (360)
T ss_pred CCCcEEEEcCcc-ccC--ccCCHHHccEEEEeccccc--c-CCceEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCC
Confidence 789999999988 321 1122222220000 12987 3 35 89999999988765430 0 0 0 0000111122
Q ss_pred hhcc--HHHHHHHHh--hH--HhH-HHHHHHHHHHHHHHHHHHHHhCCcee--eEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 79 ISDT--VRPHVQIKK--SV--LER-FVHTYVVGNFLLTHLSKLREEFAIVG--DVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 79 ~agn--lA~aaala~--~i--le~-le~v~~lG~~L~~gL~eL~~~~p~v~--~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
-+-+ .++.++++- +. ++. .++.+++.++++++|+++- -+.... ..| .+...++.+.. ...
T Consensus 239 p~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~-~~~~~~~~~~r-s~~v~sf~~~~---------~~~ 307 (360)
T PRK05355 239 PPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSD-FYRNPVAPEDR-SRMNVPFTLAD---------EEL 307 (360)
T ss_pred CcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCC-CcccCCChhhc-CCcEEEEEcCC---------hHH
Confidence 2222 344444443 11 333 5566677777777776652 111111 122 23455555432 112
Q ss_pred HHHHHHHHHHCCceeeccCCC-CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGGLS-GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G~~-~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+...+.++|+.+ ..+.. ..++|+++-.-. |.+|||.+++++
T Consensus 308 ~~~~~~~~~~~Gi~~-~~~~~~~g~vRiS~~~~n---t~eei~~l~~~l 352 (360)
T PRK05355 308 DKKFLAEAKAAGLVG-LKGHRSVGGMRASIYNAM---PLEGVQALVDFM 352 (360)
T ss_pred HHHHHHHHHHCCCcc-cCCCCccCcEEEECCCCC---CHHHHHHHHHHH
Confidence 355777888999998 44432 468999985555 589999999985
No 219
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=94.37 E-value=1.2 Score=45.56 Aligned_cols=173 Identities=12% Similarity=0.043 Sum_probs=99.4
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCc-ch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQIC-RF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~-PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
-.+||+.+|=|++..=|.-.+.--. ...+.. |+ ++|.|.=|+ =+|-+++.+++.+.+...... ...|
T Consensus 256 A~~~~~~IIEDD~y~el~~~~~p~~-~l~~ld~~~rViy~gSFSK~l~Pgl-RlG~vv~p~~~~~~~~~~k~~---~~~~ 330 (459)
T COG1167 256 AEKYDVLIIEDDYYGELRYDGPPPP-PLKALDAPGRVIYLGSFSKTLAPGL-RLGYVVAPPELIEKLLRLKQA---ADLG 330 (459)
T ss_pred HHHcCCeEEeeCcchhhhcCCCCCC-ChHhhCCCCCEEEEeeehhhccccc-ceeeeeCCHHHHHHHHHHHHH---hcCC
Confidence 3578999999999877744432110 011111 34 679999995 899999999988887641011 1234
Q ss_pred chhhhccHHHHHHHHhhHHhHHHHHHHHHHHHHH---HHHHHHHhC-CceeeEEe--eceeeEEEeecCCCCCCCCChHH
Q psy7882 76 KLKISDTVRPHVQIKKSVLERFVHTYVVGNFLLT---HLSKLREEF-AIVGDVRG--KGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 76 g~T~agnlA~aaala~~ile~le~v~~lG~~L~~---gL~eL~~~~-p~v~~VRG--~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
+++++.. +.+..+....+++ |++++-..+++ .+.+...+| |....+.+ -|+++.+++... ++
T Consensus 331 ~s~~~Q~-~la~~l~~G~~~~--hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~------~~--- 398 (459)
T COG1167 331 PSSLSQA-ALAAFLLSGHYDR--HLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEG------ID--- 398 (459)
T ss_pred CChHHHH-HHHHHHHcCCHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCC------CC---
Confidence 4444322 2222233322322 33333333322 233333334 32223332 288888888642 11
Q ss_pred HHHHHHHHHHCCceeeccCC-------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGGL-------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G~-------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+...+.++||.+.+.|. ..+.+||..... ++++|++.+..+
T Consensus 399 ~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~----~~e~i~~gi~~l 449 (459)
T COG1167 399 ARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSP----SEEEIEEGIKRL 449 (459)
T ss_pred HHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCC----CHHHHHHHHHHH
Confidence 45689999999999998442 245788876544 478888888864
No 220
>PLN02651 cysteine desulfurase
Probab=94.34 E-value=0.25 Score=48.09 Aligned_cols=101 Identities=9% Similarity=-0.123 Sum_probs=51.4
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCccccceeeechhHHHhhhhhhhc--cCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFWDKLIVHTSTCTFENFIKIKYQ--ILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~PigAv~~~~eI~d~~~~~~~~--~~~~~~hg~ 77 (329)
..+|+++++|.+|+. |.. .+-.+.+| .|+ -| + +|-..+|++.++++..+.+.+...+ ....+. ++
T Consensus 165 ~~~g~~~~vD~a~~~-g~~--~~~~~~~~--~D~~~~s~hK-~-~gp~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~-~G 236 (364)
T PLN02651 165 REKKVLFHTDAAQAV-GKI--PVDVDDLG--VDLMSISGHK-I-YGPKGVGALYVRRRPRVRLEPLMSGGGQERGRR-SG 236 (364)
T ss_pred HHcCCEEEEEcchhh-CCc--ccCcccCC--CCEEEechhh-h-CCCCceEEEEEcCCCCCCCCccccCCCccCCcc-CC
Confidence 357999999999983 221 12233334 582 28 5 4422478888898766544321000 000011 22
Q ss_pred hhhcc--HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHH
Q psy7882 78 KISDT--VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSK 113 (329)
Q Consensus 78 T~agn--lA~aaala~--~ile~-le~v~~lG~~L~~gL~e 113 (329)
|-+-. +++.++++- +..++ .++.+++.+++.++|++
T Consensus 237 T~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~ 277 (364)
T PLN02651 237 TENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRA 277 (364)
T ss_pred CccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 32222 444444432 22222 45677777777777754
No 221
>PRK08363 alanine aminotransferase; Validated
Probab=94.22 E-value=1.1 Score=44.16 Aligned_cols=176 Identities=10% Similarity=0.043 Sum_probs=81.0
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch------HHHh-hcCCccccceeee--chhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKD-FKGSFWDKLIVHT--STCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~Ka-LgGG~~PigAv~~--~~eI~d~~~~~~~~~~~~~~h 75 (329)
..+|+++|.||+...+-..|..-....+.-.+. ++|. ...| +=+|.+++ .+++.+.+.............
T Consensus 196 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G-lRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~ 274 (398)
T PRK08363 196 GEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATG-WRLGYIYFVDPEGKLAEVREAIDKLARIRLC 274 (398)
T ss_pred HHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCcc-ceEEEEEEeCcHHHHHHHHHHHHHHhccccc
Confidence 356999999999876532232111111110111 6799 4566 47888886 555544433200000000011
Q ss_pred chhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeE-EEeecCCCCCCCCChHHHH
Q psy7882 76 KLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIG-VDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 76 g~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~g-Ief~~d~~~~~p~~~~~~~ 151 (329)
.++.+. .++++++.. +.+++ .++.++.-+++.+.|++ ++.+.-....|.++. +.+.... .... ..
T Consensus 275 ~s~~~q-~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~----~~~~~~~~p~g~~~~~~~l~~~~-----~~~~-~~ 343 (398)
T PRK08363 275 PNTPAQ-FAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNE----IPGISTTKPQGAFYIFPRIEEGP-----WKDD-KE 343 (398)
T ss_pred CChHHH-HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhc----CCCCEecCCCeEEEEEEEeccCC-----CCCH-HH
Confidence 122111 233344432 33333 33344444444444433 333221233344433 3553210 0001 12
Q ss_pred HHHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+...+.++||++.++.. ..+.+|+. +.. +++++.+.++..
T Consensus 344 ~~~~~l~~~gV~v~~g~~f~~~~~~~iRis--~~~---~~~~l~~~l~~l 388 (398)
T PRK08363 344 FVLDVLHEAHVLFVHGSGFGEYGAGHFRLV--FLP---PVEILEEAMDRF 388 (398)
T ss_pred HHHHHHHhCCEEEeCchhhCCCCCCeEEEE--ecC---CHHHHHHHHHHH
Confidence 234556789999987532 13567775 222 478888888764
No 222
>KOG1360|consensus
Probab=94.17 E-value=1 Score=45.63 Aligned_cols=167 Identities=10% Similarity=0.007 Sum_probs=88.7
Q ss_pred CccccccceEEehhHhhchhccchhh--hhcccCCcc--h-----HHHhhc--CCccccceeeechhHHHhhhhhhhccC
Q psy7882 2 DTTYYRDCGVVVSAVDFGSGDNGTYL--GFQCLQICR--F-----VQKDFK--GSFWDKLIVHTSTCTFENFIKIKYQIL 70 (329)
Q Consensus 2 ~~~~~~giLLI~DEVqTGfGRTG~~f--A~e~~GV~P--D-----i~KaLg--GG~~PigAv~~~~eI~d~~~~~~~~~~ 70 (329)
|+...+|++--+|||.. .|..|..+ --|+-||-+ | ++|++| ||| +..+..+.|.+..
T Consensus 327 Dvah~yGAiTFlDEVHA-VGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVGGY-----IAat~~LvDmiRS------ 394 (570)
T KOG1360|consen 327 DVAHKYGAITFLDEVHA-VGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVGGY-----IAATRKLVDMIRS------ 394 (570)
T ss_pred HHHHHhCceeeeehhhh-hccccCCCCCccccCCcchhhhhcccchhhhcccccce-----ehhhhhHHHHHHH------
Confidence 66778999999999987 55555433 335567655 4 578886 454 4556667776543
Q ss_pred CCCccchhhhcc---HHHHHHHHh-hHHhH--HHHHHHHHHHHHHHHHHHHHhC--CceeeEEeeceeeEEEeecCCCCC
Q psy7882 71 KTPAHKLKISDT---VRPHVQIKK-SVLER--FVHTYVVGNFLLTHLSKLREEF--AIVGDVRGKGLMIGVDLVQDKETK 142 (329)
Q Consensus 71 ~~~~hg~T~agn---lA~aaala~-~ile~--le~v~~lG~~L~~gL~eL~~~~--p~v~~VRG~GLm~gIef~~d~~~~ 142 (329)
+.-|--|+.. ..++-|++. +++.. -...++.-++-...++++..+. |.+-.- -=++-+-+.
T Consensus 395 --yAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~~p---SHIiPv~vg------ 463 (570)
T KOG1360|consen 395 --YAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIPNP---SHIIPVRVG------ 463 (570)
T ss_pred --hcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcccCCC---cceeeeecc------
Confidence 2222222222 333444444 44432 1112233333333344433332 222111 011122221
Q ss_pred CCCChHHHHHHHHHHH-HCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 143 VPLNSRHMTHILDSCK-EHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 143 ~p~~~~~~~~~~~~l~-e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+......+...++ ++|++++.-. .+...+|+.|. ..||.+-.+.+++++
T Consensus 464 ---da~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPT---P~HT~~mm~~lv~~l 518 (570)
T KOG1360|consen 464 ---DAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPT---PHHTPQMMNILVNAL 518 (570)
T ss_pred ---CHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCC---CCCCHHHHHHHHHHH
Confidence 2356667777766 5899998532 24577899883 345777777777764
No 223
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=94.14 E-value=0.81 Score=45.28 Aligned_cols=169 Identities=8% Similarity=-0.062 Sum_probs=84.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCc---ch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQIC---RF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~---PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~ 74 (329)
.++|+++|.||+..-+ .... ...... .+ ++|....|+ -+|.+++.+++++.+.. ... ....
T Consensus 209 ~~~~~~iI~De~Y~~~-~~~~----~~~~~~~~~~~~vI~~~SfSK~~~pGl-RiG~~i~~~~l~~~~~~--~~~-~~~~ 279 (416)
T PRK09440 209 RQHNIPLLIDNAYGPP-FPGI----IFSEATPLWNPNIILCMSLSKLGLPGV-RCGIVIADEEIIEALSN--MNG-IISL 279 (416)
T ss_pred HHcCCcEEEeCCcccc-CCCc----chhhcCccccCCeEEEecccccCCCcc-eEEEEeCCHHHHHHHHH--HHH-Hhcc
Confidence 3579999999997421 1110 011111 12 579766674 78999999999887753 110 0011
Q ss_pred cchhhhccHHHHHHHHh-hHHhHHH-----HHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCCh
Q psy7882 75 HKLKISDTVRPHVQIKK-SVLERFV-----HTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNS 147 (329)
Q Consensus 75 hg~T~agnlA~aaala~-~ile~le-----~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~ 147 (329)
+.++++. .++++++.. +..+.+. ..++.-+.+++.|++.....+ +.-+... |+++-+++.... .+
T Consensus 280 ~~s~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~-~~~~~p~gg~fiw~~~~~~~-----~~- 351 (416)
T PRK09440 280 APGRLGP-AIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEP-CLIHKPEGAIFLWLWFKDLP-----IT- 351 (416)
T ss_pred CCCcHHH-HHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-eEEecCCCceEEEEECCCCC-----CC-
Confidence 2222221 233344443 3221111 112222233333333221111 1112333 677777774211 11
Q ss_pred HHHHHHHHHHHHCCceeeccCC---C--------CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 148 RHMTHILDSCKEHGLLLGRGGL---S--------GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 148 ~~~~~~~~~l~e~GVLl~~~G~---~--------~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|.++||.+.++.. . .+.+|+.- .. ++++++++++.+
T Consensus 352 --~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~--~~---~~~~l~~~i~~l 405 (416)
T PRK09440 352 --TEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNY--VQ---DDEEIEKGIAIL 405 (416)
T ss_pred --HHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEe--cC---CHHHHHHHHHHH
Confidence 24567778899999988421 1 13677752 21 478899988874
No 224
>KOG1358|consensus
Probab=93.94 E-value=0.069 Score=53.43 Aligned_cols=175 Identities=13% Similarity=0.008 Sum_probs=90.9
Q ss_pred ccccceEEehhHhhchhccch--hhhhcccCCcch----HHHhhcCCccccce-eeechhHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT--YLGFQCLQICRF----VQKDFKGSFWDKLI-VHTSTCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~--~fA~e~~GV~PD----i~KaLgGG~~PigA-v~~~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
.++..-+|+||-.+ ||-.|+ .+-.+|+||.++ +.-++.+++.-.|+ +.|+.-+.+. +. -.+.+-
T Consensus 260 ~Kyk~RvildEs~S-fG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~GgFc~G~~~i~~h------Qr--LSg~~Y 330 (467)
T KOG1358|consen 260 NKYKFRVILDESLS-FGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGGGFCAGKSFIADH------QR--LSGSGY 330 (467)
T ss_pred hhheEEEEEecccc-cccccccCccccccCCCCccceeeeeecccccccccCceeecceeeEee------ee--ccccce
Confidence 45567899999876 554443 457899999876 22233333222222 3344333221 11 123445
Q ss_pred hhhcc---HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEee--ceeeEEEeecCCCCCCCCCh
Q psy7882 78 KISDT---VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK--GLMIGVDLVQDKETKVPLNS 147 (329)
Q Consensus 78 T~agn---lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~--GLm~gIef~~d~~~~~p~~~ 147 (329)
.|++. +.+.+|++. .++++ ++.++.+...+.+.|+.. .-..|+|. -.++.+.+.....+++. ..
T Consensus 331 ~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~-----s~~~v~~~~~SPi~hl~l~~~~~s~e~-e~ 404 (467)
T KOG1358|consen 331 CFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSN-----SGFIVSGSPESPIIHLQLERSYGSREK-EE 404 (467)
T ss_pred eeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhcC-----CceEEecCcCCceeeeeecccccchHH-HH
Confidence 56666 233344555 55554 344555555555555441 11244553 34555555432111100 01
Q ss_pred HHHHHHHHHHHHCCceeeccCC--------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 148 RHMTHILDSCKEHGLLLGRGGL--------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 148 ~~~~~~~~~l~e~GVLl~~~G~--------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+...+...|+.+|+++..+.. ....+|++ +...++++||+.+.+..
T Consensus 405 ~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~---~~a~~seeel~ra~~~i 459 (467)
T KOG1358|consen 405 KLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRIC---VSAGMSEEELERAAELI 459 (467)
T ss_pred HHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEE---EeCCCCHHHHHHHHHHH
Confidence 2467788888888988865421 12233432 45567899999998864
No 225
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=93.93 E-value=1.3 Score=45.26 Aligned_cols=137 Identities=11% Similarity=-0.062 Sum_probs=69.0
Q ss_pred cccceeee-c-hhHHHhhhhhhhccCCCCccc-hhhhcc-HHHHHHHHh---hHHhH--HHHHHHHHHHHHHHHHHHHHh
Q psy7882 47 WDKLIVHT-S-TCTFENFIKIKYQILKTPAHK-LKISDT-VRPHVQIKK---SVLER--FVHTYVVGNFLLTHLSKLREE 117 (329)
Q Consensus 47 ~PigAv~~-~-~eI~d~~~~~~~~~~~~~~hg-~T~agn-lA~aaala~---~ile~--le~v~~lG~~L~~gL~eL~~~ 117 (329)
.|.|++++ + +++++.+.. .....|+ .||++. ..|.+|++. +.+++ ++...+.-++|.+.|++. .
T Consensus 264 ~~~GG~i~~~d~~l~~~~~~-----~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~--G 336 (460)
T PRK13238 264 VNIGGLLCFRDEDLFTECRT-----LCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA--G 336 (460)
T ss_pred CcceeEEEcChHHHHHHhhh-----cccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC--C
Confidence 36655555 4 456655432 1112455 488886 665666554 33332 332233346677777663 4
Q ss_pred CCceeeEEeeceeeEEEeecCCC--CCCCCChHHHHHHHHHH-HHCCceeeccC-----C----------CCCEEEEeCc
Q psy7882 118 FAIVGDVRGKGLMIGVDLVQDKE--TKVPLNSRHMTHILDSC-KEHGLLLGRGG-----L----------SGNTLTALQP 179 (329)
Q Consensus 118 ~p~v~~VRG~GLm~gIef~~d~~--~~~p~~~~~~~~~~~~l-~e~GVLl~~~G-----~----------~~nvIrl~PP 179 (329)
.+.+....| ..+-+++..-.+ ....|+ ...++..| .+.||.+.+.+ . ..+.+||+=|
T Consensus 337 ~~~~~p~Gg--~~v~~d~~~~~~~~~~~~~~---~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~ 411 (460)
T PRK13238 337 VPIQTPAGG--HAVFVDAGKFLPHIPAEQFP---AQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIP 411 (460)
T ss_pred CCeEccCCc--eEEEEEchhcCCCCCCCCCc---hHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecc
Confidence 555544444 333344422100 001111 24455444 57899887643 1 1377888766
Q ss_pred cccCcCCHHHHHHHHhcc
Q psy7882 180 KLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 180 L~It~~t~eeId~~l~~~ 197 (329)
==.. |++++|.+.+++
T Consensus 412 rr~~--~~~~~~~~~~~l 427 (460)
T PRK13238 412 RRVY--TQSHMDYVAEAL 427 (460)
T ss_pred cccC--CHHHHHHHHHHH
Confidence 3111 578888887764
No 226
>PRK06460 hypothetical protein; Provisional
Probab=93.73 E-value=0.72 Score=45.67 Aligned_cols=115 Identities=10% Similarity=-0.018 Sum_probs=59.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
..+|+++|+||++..+ -.. .......| ++|.++|.- .=.|.+++++++.+.+.. .. ...+.+
T Consensus 157 ~~~g~~vivDea~~~~-~~~-----~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~--~~----~~~g~~ 224 (376)
T PRK06460 157 KENGSILIVDATFSTP-INQ-----KPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQ--MR----RTLGTS 224 (376)
T ss_pred HHcCCEEEEECCcCcc-ccC-----ChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHH--HH----HhcCCC
Confidence 3579999999997532 111 11111246 459986410 125677788888776653 10 011111
Q ss_pred hhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceee------------------EEeeceeeEEEee
Q psy7882 79 ISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGD------------------VRGKGLMIGVDLV 136 (329)
Q Consensus 79 ~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~------------------VRG~GLm~gIef~ 136 (329)
.+. .++..++.. +.++. ++++.+..++|.+.|++ ||.+.. .+|.|.|++|++.
T Consensus 225 ~~~-~~a~~~l~~~~~l~~r~~~~~~n~~~l~~~L~~----~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~ 297 (376)
T PRK06460 225 LDP-HAAYLTLRGIKTLKIRMDVINRNAEQIAEFLEG----HPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVN 297 (376)
T ss_pred CCH-HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHc----CCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence 111 222222233 33433 55555655666665553 333322 2477888888885
No 227
>PRK05839 hypothetical protein; Provisional
Probab=93.72 E-value=1.1 Score=43.83 Aligned_cols=163 Identities=9% Similarity=-0.007 Sum_probs=81.1
Q ss_pred ccccceEEehhHhhchhccchhhhhccc----CC-cch-------HHHhh-cCCccccceeeechhHHHhhhhhhhccCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCL----QI-CRF-------VQKDF-KGSFWDKLIVHTSTCTFENFIKIKYQILK 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~----GV-~PD-------i~KaL-gGG~~PigAv~~~~eI~d~~~~~~~~~~~ 71 (329)
..+|+++|.||+...|...+...+.... +. ..| ++|.+ ..| +=+|.+++++++.+.+.. ... .
T Consensus 185 ~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G-lRiG~ii~~~~~~~~~~~--~~~-~ 260 (374)
T PRK05839 185 LKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPG-LRSGFIAGDASILKKYKA--YRT-Y 260 (374)
T ss_pred HHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCcc-ceeEEEecCHHHHHHHHH--HHh-h
Confidence 3579999999998877322221111110 11 112 67985 456 489999999998887653 100 0
Q ss_pred CCccchhhhccHHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHH
Q psy7882 72 TPAHKLKISDTVRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHM 150 (329)
Q Consensus 72 ~~~hg~T~agnlA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~ 150 (329)
...+.++.+. .++.+++.. +.++ ++-+.+++..+.+.+..+.. .-.-|+++-+.+.+ .
T Consensus 261 ~~~~~~~~~q-~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~l~~~--~p~gg~fi~~~~~~------------~ 319 (374)
T PRK05839 261 LGCASPLPLQ-KAAAVAWLDDEHAE------FFRNIYAKNLKLAREILGIT--IPPATFYVWLPVDN------------D 319 (374)
T ss_pred cCCCCChHHH-HHHHHHhccchHHH------HHHHHHHHHHHHHHHhcCCC--CCCeeEEEEEeCCC------------h
Confidence 0011111111 222223322 3322 22222333332222211111 11235566665531 1
Q ss_pred HHHHHHHHH-CCceeeccCC------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKE-HGLLLGRGGL------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e-~GVLl~~~G~------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+...|.+ +||.+.++.. ..+.+|+.= . .+++++.+.++..
T Consensus 320 ~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~--~---~~~~~~~~~l~~l 368 (374)
T PRK05839 320 EEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIAL--V---YDTPKLEKALEII 368 (374)
T ss_pred HHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEe--c---CCHHHHHHHHHHH
Confidence 346777765 9999988421 136788752 2 2578888888764
No 228
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=93.65 E-value=1.2 Score=45.40 Aligned_cols=174 Identities=10% Similarity=0.023 Sum_probs=85.8
Q ss_pred cccceEEehhHhhchhccchhh-h-hccc------CC-cch-------HHHhhc-CCccccceeeechh-HHHhhhhhhh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYL-G-FQCL------QI-CRF-------VQKDFK-GSFWDKLIVHTSTC-TFENFIKIKY 67 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~f-A-~e~~------GV-~PD-------i~KaLg-GG~~PigAv~~~~e-I~d~~~~~~~ 67 (329)
.||+.+|.||+...+-..+.-+ . .... +. .++ ++|.++ .|+ =+|.+++..+ +.+.+.. .
T Consensus 222 ~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~Gl-RiG~li~~~~~l~~~~~~--~ 298 (468)
T PLN02450 222 AKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGF-RVGAIYSNDEMVVSAATK--M 298 (468)
T ss_pred HCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCc-cEEEEEECCHHHHHHHHH--H
Confidence 5799999999998764343211 1 1111 11 123 679997 885 8999998754 4554432 1
Q ss_pred ccCCCCccchhhhccHHHHHHHHh-hH----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC
Q psy7882 68 QILKTPAHKLKISDTVRPHVQIKK-SV----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET 141 (329)
Q Consensus 68 ~~~~~~~hg~T~agnlA~aaala~-~i----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~ 141 (329)
. .+...++.+. .+++++++. +. +++ .+.+++.-+.+.+.|+ +++.....-.-|+++-+.+......
T Consensus 299 ~---~~~~~s~~~Q-~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~----~~gi~~~~~~~g~flwi~l~~~~~~ 370 (468)
T PLN02450 299 S---SFGLVSSQTQ-YLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLE----AAGIKCLKSNAGLFCWVDMRHLLKS 370 (468)
T ss_pred h---hcCCCCHHHH-HHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHH----HcCCcccCCCceEEEEEEchHhcCc
Confidence 1 1111122111 344444544 22 221 2223333333333333 3433111122466777777421100
Q ss_pred CCCCChHHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+ +....++..+. ++||.+.|... ..+.+|+. .+..+++++++.++..
T Consensus 371 -~~~--~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~----f~~~~~~~l~~~l~ri 424 (468)
T PLN02450 371 -NTF--EAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVC----FANMSEETLDLAMKRL 424 (468)
T ss_pred -CCc--hHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEE----ecCCCHHHHHHHHHHH
Confidence 011 11234556655 58999988531 24567764 2222578888888864
No 229
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=93.60 E-value=1.7 Score=43.03 Aligned_cols=172 Identities=6% Similarity=-0.115 Sum_probs=83.1
Q ss_pred ccccceEEehhHhhchhccchhh-hhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhh--------h-h
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIK--------I-K 66 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~--------~-~ 66 (329)
.+|++++|.||+...|-..+... ....+.-.++ ++|.++ .|+ =+|.+++.+++.+.+.. . .
T Consensus 206 ~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGl-RiG~~i~~~~li~~~~~~~~~~~~~~~~ 284 (409)
T PRK07590 206 KENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGT-RCAYTVVPKELKGKTSDGEGVSLNSLWN 284 (409)
T ss_pred HHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCc-eeEEEEcCHHHhhhccccchhhhHHHHH
Confidence 45799999999988773323210 1111110122 579996 774 78999999888763210 0 0
Q ss_pred hccCCCCccchhhhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCC
Q psy7882 67 YQILKTPAHKLKISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKET 141 (329)
Q Consensus 67 ~~~~~~~~hg~T~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~ 141 (329)
......+.+.++.+. .++++++.. +.+++ .+..++.-+.+.+.|+ .++ +.-..+. |.++-+.+...
T Consensus 285 ~~~~~~~~~~s~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~----~~~-~~~~~~~g~~f~wi~~~~~--- 355 (409)
T PRK07590 285 RRQSTKFNGVSYIVQ-RAAEAVYSPEGKAQIKELIDYYMENAKIIREGLE----SAG-FEVYGGVNAPYIWVKTPDG--- 355 (409)
T ss_pred HHHhhcccCcCHHHH-HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHH----hcC-CceecCCcceEEEEECCCC---
Confidence 000000011111111 223333322 12221 2223333333333333 333 2112233 45666666421
Q ss_pred CCCCChHHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+ ...+...+. ++||++.++.. ..+.+|+. +.. +++++++.++..
T Consensus 356 ---~~---~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~~---~~~~l~~~l~rl 405 (409)
T PRK07590 356 ---MS---SWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLS--AFG---SRENVLEAMERI 405 (409)
T ss_pred ---CC---HHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEE--ccC---CHHHHHHHHHHH
Confidence 11 234666665 57999987521 13578876 222 578899888764
No 230
>PRK06836 aspartate aminotransferase; Provisional
Probab=93.36 E-value=1.1 Score=44.26 Aligned_cols=164 Identities=9% Similarity=-0.019 Sum_probs=80.2
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHh--hhhhhhccCCCCccch
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFEN--FIKIKYQILKTPAHKL 77 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~--~~~~~~~~~~~~~hg~ 77 (329)
||+++|.||+...|-..|.... ......+. ++|.++ .|+ -+|.+.+++++.+. +....... . ...+
T Consensus 206 ~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~~~pGl-RiG~~~~~~~~~~~~~~~~~~~~~-~-~~~~- 280 (394)
T PRK06836 206 RPIYLISDEPYREIVYDGAEVP-YIFKYYDNSIVVYSFSKSLSLPGE-RIGYIAVNPEMEDADDLVAALVFA-N-RILG- 280 (394)
T ss_pred CCeEEEEeccccccccCCCCCC-ChHHccCcEEEEecchhhccCcce-eeEEEecCHHHhhhHHHHHHHHHH-h-hccc-
Confidence 7999999999987743221100 00111122 679998 674 88999988876432 11100000 0 0001
Q ss_pred hhhcc-HHH---HHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 78 KISDT-VRP---HVQIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 78 T~agn-lA~---aaala~~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
..+.+ +.. +..+.... . ....++.-+.+.+.|+ +++.. -... -|+.+.+.+.. . + ...
T Consensus 281 ~~~~~~~~q~~~~~~l~~~~-~-~~~~~~~r~~l~~~L~----~~g~~-~~~~~gg~~~~~~~~~-~------~---~~~ 343 (394)
T PRK06836 281 FVNAPALMQRVVAKCLDATV-D-VSIYKRNRDLLYDGLT----ELGFE-CVKPQGAFYLFPKSPE-E------D---DVA 343 (394)
T ss_pred cccCCHHHHHHHHHHhCChH-H-HHHHHHHHHHHHHHHH----hCCCE-eecCCceEEEEEeCCC-C------C---HHH
Confidence 01122 222 22221111 0 2223333344444443 34321 1212 25555554421 1 1 234
Q ss_pred HHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.+.|.++||.+.++.. .++.+||.-. . +++++.+.++..
T Consensus 344 ~~~~l~~~gv~v~~g~~f~~~~~iRi~~~--~---~~~~~~~~i~~l 385 (394)
T PRK06836 344 FCEKAKKHNLLLVPGSGFGCPGYFRLSYC--V---DTETIERSLPAF 385 (394)
T ss_pred HHHHHHhCCEEEECchhcCCCCeEEEEec--C---CHHHHHHHHHHH
Confidence 66888899999988531 2467887542 2 578988888765
No 231
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=93.25 E-value=1.8 Score=42.54 Aligned_cols=173 Identities=11% Similarity=0.013 Sum_probs=88.9
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-HHHhhcCCccc-cceeeechhHHHhhhhhhhccC--CC-Cccchhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-VQKDFKGSFWD-KLIVHTSTCTFENFIKIKYQIL--KT-PAHKLKI 79 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-i~KaLgGG~~P-igAv~~~~eI~d~~~~~~~~~~--~~-~~hg~T~ 79 (329)
..+|+++|+|=||+ +|-. -.-.+.+++--= --|++| .| +|++.++++..+.+.+...... .. ..+..++
T Consensus 152 ~~~~~l~iVDavss-~g~~--~id~~~~d~~~~ssqK~lg---P~Glg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (349)
T TIGR01364 152 DVKNAPLVADMSSN-ILSR--PIDVSKFGLIYAGAQKNIG---PAGLTVVIVRKDLLGRASRITPSMLNYKIHAENDSMY 225 (349)
T ss_pred ccCCCeEEEEcccc-ccCc--cCCHHHccEEEEecccccC---CCceEEEEECHHHHhhcccCCCCcchHHHHHhcCCCC
Confidence 34689999999988 3211 111222221000 129873 36 8999999998876543100000 00 0011112
Q ss_pred -hccH----HHHHHHHh--h--HHhH-HHHHHHHHHHHHHHHHHHHHhCCcee--eEEeeceeeEEEeecCCCCCCCCCh
Q psy7882 80 -SDTV----RPHVQIKK--S--VLER-FVHTYVVGNFLLTHLSKLREEFAIVG--DVRGKGLMIGVDLVQDKETKVPLNS 147 (329)
Q Consensus 80 -agnl----A~aaala~--~--ile~-le~v~~lG~~L~~gL~eL~~~~p~v~--~VRG~GLm~gIef~~d~~~~~p~~~ 147 (329)
+-|+ +..++++- + -++. .++-+++.++++++|+++-.-+.... ..|. ..+.++.+...
T Consensus 226 ~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs-~~v~sf~~~~~--------- 295 (349)
T TIGR01364 226 NTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRS-RMNVVFTLGNE--------- 295 (349)
T ss_pred CCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcC-CeEEEEecCCh---------
Confidence 2223 33333332 1 1333 45556666666666665511001111 1221 24455554321
Q ss_pred HHHHHHHHHHHHCCceeeccCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 148 RHMTHILDSCKEHGLLLGRGGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 148 ~~~~~~~~~l~e~GVLl~~~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.....+...+.++|+.+.+ +. ...++|+.+-... |.+|||.+++++
T Consensus 296 ~~~~~~~~~~~~~Gi~~~~-~~~~~g~vRvS~~~~n---t~edid~l~~al 342 (349)
T TIGR01364 296 ELEKRFLKEAEERGLVSLK-GHRSVGGMRASIYNAM---PLEGVQALVDFM 342 (349)
T ss_pred hHhHHHHHHHHHCCCcccC-CccccCeeEEECcCCC---CHHHHHHHHHHH
Confidence 1235677788899995544 43 2468999985555 689999999985
No 232
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=92.90 E-value=2.9 Score=41.08 Aligned_cols=162 Identities=7% Similarity=-0.060 Sum_probs=83.0
Q ss_pred cccceEEehhHhhchhccch--h---h-hhcccCC-cch-------HHHhh-cCCccccceeeechhHHHhhhhhhhccC
Q psy7882 6 YRDCGVVVSAVDFGSGDNGT--Y---L-GFQCLQI-CRF-------VQKDF-KGSFWDKLIVHTSTCTFENFIKIKYQIL 70 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~--~---f-A~e~~GV-~PD-------i~KaL-gGG~~PigAv~~~~eI~d~~~~~~~~~~ 70 (329)
.|++++|.||+...+...+. . + .....+. ..| ++|.+ ..| +=+|.+++.+++.+.+.. ...
T Consensus 196 ~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~G-lRvG~~i~~~~l~~~~~~--~~~- 271 (393)
T TIGR03538 196 QYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPG-LRSGFVAGDAEILKAFLR--YRT- 271 (393)
T ss_pred HCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcc-cceEEEecCHHHHHHHHH--HHH-
Confidence 57999999999886643221 1 1 1111221 123 67974 455 478999999988877653 110
Q ss_pred CCCccchhhhcc-HHH---HHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCC
Q psy7882 71 KTPAHKLKISDT-VRP---HVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVP 144 (329)
Q Consensus 71 ~~~~hg~T~agn-lA~---aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p 144 (329)
.+ +++.+ +.. .+++.. +.+++ .+..++.-+.+.+.|++. .+. ..-.-|+++-+++..
T Consensus 272 ---~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~---~~~--~~p~gg~f~~~~~~~------- 334 (393)
T TIGR03538 272 ---YH--GCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV---LDL--ELPDAGFYLWPKVPG------- 334 (393)
T ss_pred ---hh--ccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh---Ccc--cCCCeeEEEEEECCC-------
Confidence 01 11122 222 223322 33332 223333334444444432 111 112236666666631
Q ss_pred CChHHHHHHHHHHH-HCCceeeccCC----------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 145 LNSRHMTHILDSCK-EHGLLLGRGGL----------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 145 ~~~~~~~~~~~~l~-e~GVLl~~~G~----------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+ ...+.+.++ ++||.+.+... ..+.+|+.- .. +++++++.++..
T Consensus 335 -~---~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~--~~---~~~~l~~~l~~l 389 (393)
T TIGR03538 335 -D---DEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIAL--VA---PLEECVEAAERI 389 (393)
T ss_pred -C---HHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEe--cC---CHHHHHHHHHHH
Confidence 1 234677765 58999976431 135677753 22 468888888764
No 233
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=92.88 E-value=0.23 Score=49.18 Aligned_cols=53 Identities=15% Similarity=-0.080 Sum_probs=34.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~ 63 (329)
..+|+++|+||++..+ -. +.-....+| +.|.++|....+ |++++++++.+.+.
T Consensus 166 ~~~gi~livD~a~~~~-~~-----~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~ 224 (380)
T TIGR01325 166 HAIGALLVVDNVFATP-VL-----QQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVA 224 (380)
T ss_pred HHcCCEEEEECCCccc-cc-----CCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHH
Confidence 3579999999998632 11 112233468 359998854455 77778888777665
No 234
>PRK05968 hypothetical protein; Provisional
Probab=92.85 E-value=0.94 Score=45.04 Aligned_cols=137 Identities=12% Similarity=0.021 Sum_probs=70.7
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
..+|+++|+|+.+... -... .. .+|+ | +.|.++|.--++ |++++++++++.+...... ..+..
T Consensus 174 ~~~gi~vivD~a~a~~-~~~~--p~-~~g~--Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~-----~~g~~ 242 (389)
T PRK05968 174 KRHGVVTMIDNSWASP-VFQR--PI-TLGV--DLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYP-----YLGAK 242 (389)
T ss_pred HHcCCEEEEECCCcch-hccC--ch-hcCC--cEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHH-----hCCCC
Confidence 4579999999987432 1111 11 1233 6 359998731233 5666788877665420000 11211
Q ss_pred hhccHHHHHHHHh-hHHh-HHHHHHHHHHHHHHHHHHHHHhCCceeeEE-------------eeceeeEEEeecCCCCCC
Q psy7882 79 ISDTVRPHVQIKK-SVLE-RFVHTYVVGNFLLTHLSKLREEFAIVGDVR-------------GKGLMIGVDLVQDKETKV 143 (329)
Q Consensus 79 ~agnlA~aaala~-~ile-~le~v~~lG~~L~~gL~eL~~~~p~v~~VR-------------G~GLm~gIef~~d~~~~~ 143 (329)
.+. ..++.++.. +-+. ++++-.+..+.+.+.|+ .+|.+..|. |.|.|+.+++...
T Consensus 243 ~~~-~~A~~~l~~L~tl~~r~~~~~~~a~~la~~L~----~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~----- 312 (389)
T PRK05968 243 LSP-FEAWLLLRGLRTLPLRMKAHEASALEIARRLK----AHPVVERVCHPALANHPPAGLSGTSGLFSFIFREG----- 312 (389)
T ss_pred CCh-HHHHHHHcccCcHHHHHHHHHHHHHHHHHHHH----hCCCccEEECCCCCCChHHhCCCCceEEEEEECCH-----
Confidence 111 233333333 2222 24444445555555554 456665554 6788999998521
Q ss_pred CCChHHHHHHHHHHHHCCceeec
Q psy7882 144 PLNSRHMTHILDSCKEHGLLLGR 166 (329)
Q Consensus 144 p~~~~~~~~~~~~l~e~GVLl~~ 166 (329)
....+|+..|...++-+..
T Consensus 313 ----~~~~~f~~~L~~~~~~~s~ 331 (389)
T PRK05968 313 ----IDVRAFADALKLFRLGVSW 331 (389)
T ss_pred ----HHHHHHHHhCCccEEecCC
Confidence 1245677777655554433
No 235
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=92.63 E-value=2.6 Score=41.46 Aligned_cols=163 Identities=7% Similarity=-0.039 Sum_probs=81.7
Q ss_pred ccccceEEehhHhhchhccch--hhh-h---cccCC-cch-------HHHhh-cCCccccceeeechhHHHhhhhhhhcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT--YLG-F---QCLQI-CRF-------VQKDF-KGSFWDKLIVHTSTCTFENFIKIKYQI 69 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~--~fA-~---e~~GV-~PD-------i~KaL-gGG~~PigAv~~~~eI~d~~~~~~~~~ 69 (329)
..||+++|.||+..-|--.+. ... . ...+. ..| ++|.+ ..| +-+|.+++++++.+.+.. ..
T Consensus 196 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G-lRiG~~~~~~~l~~~~~~--~~- 271 (396)
T PRK09147 196 DRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPG-LRSGFVAGDAALLKKFLL--YR- 271 (396)
T ss_pred HHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCcc-ceeeeecCCHHHHHHHHH--Hh-
Confidence 357999999999887632221 100 0 11111 123 57974 455 588999999998887653 11
Q ss_pred CCCCccchhhhcc-HHHH---HHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCC
Q psy7882 70 LKTPAHKLKISDT-VRPH---VQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKV 143 (329)
Q Consensus 70 ~~~~~hg~T~agn-lA~a---aala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~ 143 (329)
..+ +++.+ ++.. +++.. +.+.+ .+.+++.-+.+.+.|++. ... ..-.-|+++-+++..
T Consensus 272 ---~~~--~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~---~~~--~~p~~g~f~~~~~~~------ 335 (396)
T PRK09147 272 ---TYH--GCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV---LDV--QLPDAGFYLWAKVPG------ 335 (396)
T ss_pred ---hhc--ccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh---cCC--CCCCeeEEEEEECCC------
Confidence 011 11222 2222 22222 23322 222333333333333321 111 112347777777631
Q ss_pred CCChHHHHHHHHHHH-HCCceeeccCC----------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 144 PLNSRHMTHILDSCK-EHGLLLGRGGL----------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 144 p~~~~~~~~~~~~l~-e~GVLl~~~G~----------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+ ...+...++ ++||.+.++.. ..+.+|+.- .. +++++++.++..
T Consensus 336 --~---~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~--~~---~~~~l~~~l~rl 390 (396)
T PRK09147 336 --D---DTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIAL--VA---PLAECVEAAERI 390 (396)
T ss_pred --C---HHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEe--cC---CHHHHHHHHHHH
Confidence 1 234666665 68999987421 135677753 22 367888888764
No 236
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=92.54 E-value=1.6 Score=44.79 Aligned_cols=177 Identities=10% Similarity=-0.097 Sum_probs=86.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhc----CCccccceeeechhHHHhhhhhhhc-cCCCC-
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFK----GSFWDKLIVHTSTCTFENFIKIKYQ-ILKTP- 73 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLg----GG~~PigAv~~~~eI~d~~~~~~~~-~~~~~- 73 (329)
..+|+++|+|+++. .+-+|.. ....+|+ |+ -|.++ +|..-+|++.++++..+.+.....+ ....+
T Consensus 235 ~~~gal~iVD~a~~-~~~~g~~-~~~~~Ga--D~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~ 310 (481)
T PRK04366 235 HEAGGLLYYDGANL-NAILGKA-RPGDMGF--DVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYR 310 (481)
T ss_pred HHcCCEEEEEecCh-hhhcccC-CccccCC--CEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCcee
Confidence 35799999999985 2233321 2233443 62 28775 2321246677787766554210000 00000
Q ss_pred ------cc---chhhhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEee
Q psy7882 74 ------AH---KLKISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLV 136 (329)
Q Consensus 74 ------~h---g~T~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~ 136 (329)
-| .-.++++ +.+.++..- .. +++ .++...+..+|.++|+++ +..... +. .+..+-|.
T Consensus 311 l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~---~~~~~~--~~-~~~~~~~~ 384 (481)
T PRK04366 311 LDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI---YDLPYD--RP-CMHEFVLS 384 (481)
T ss_pred ecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh---CcccCC--CC-eeEEEEEE
Confidence 01 0112333 222222221 11 222 345566788888888876 332211 11 11111111
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHCCceeeccC---CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 137 QDKETKVPLNSRHMTHILDSCKEHGLLLGRGG---LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G---~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...-. . .......+.+.|.++|+...... ...+.++++|-... |++|||++++++
T Consensus 385 ~~~~~-~--~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~---t~edid~l~~~l 442 (481)
T PRK04366 385 GKKLK-E--TGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETE---SKETLDAFIAAM 442 (481)
T ss_pred Ccccc-c--cCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCC---CHHHHHHHHHHH
Confidence 10000 0 00124568899999999875221 12567888876644 689999999985
No 237
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=92.42 E-value=2.2 Score=42.70 Aligned_cols=165 Identities=11% Similarity=0.034 Sum_probs=88.1
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcc--h-------HHHhhc-CCccccceeeec-hhHHHhhhhhhhccCCCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICR--F-------VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKYQILKTP 73 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~P--D-------i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~~~~~~~ 73 (329)
.+||+.+|.|||..++-..|..+ .....+.| | ++|..+ -| +=+|-+++. +++.+.+..
T Consensus 193 ~~~~i~ii~DEiY~~l~yd~~~~-~s~~~~~~~~~~~i~i~s~SK~~~mtG-wRvG~~v~~~~~l~~~~~~--------- 261 (393)
T COG0436 193 REHDIIIISDEIYEELVYDGAEH-PSILELAGARDRTITINSFSKTYGMTG-WRIGWVVGPPEELIAALRK--------- 261 (393)
T ss_pred HHcCeEEEEehhhhhcccCCCCc-CCHhhcCCCcceEEEEecccccccccc-cceeEeecChHHHHHHHHH---------
Confidence 46899999999999997777411 11223444 4 578877 44 478989888 778776642
Q ss_pred ccchhh-hcc----HHHHHHHHh-h---HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCCC
Q psy7882 74 AHKLKI-SDT----VRPHVQIKK-S---VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKETK 142 (329)
Q Consensus 74 ~hg~T~-agn----lA~aaala~-~---ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~~ 142 (329)
.|..+. +.+ .|+.+++.. + .++. .+..++.-+.+.+.|.++ +.+..+. -.|.|..+--.+..
T Consensus 262 ~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~----~g~~~~~~p~Ga~Y~~~~i~~~--- 334 (393)
T COG0436 262 LKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEI----GGLSVVKPPEGAFYLFPKIPEL--- 334 (393)
T ss_pred HHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhc----CCeeeccCCCeeEEEEeecCCC---
Confidence 122111 222 455555654 2 2222 122333333444444433 3233334 23555443322111
Q ss_pred CCCChHHHHHHHHHHH-HCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 143 VPLNSRHMTHILDSCK-EHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 143 ~p~~~~~~~~~~~~l~-e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+ ...|+..|+ +.||.+.|... ..+.+|++ |.. +.+++.+.++..
T Consensus 335 --~d---~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis--~~~---~~~~l~~a~~rl 385 (393)
T COG0436 335 --LD---SEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLS--LAT---SEETLEEALRRL 385 (393)
T ss_pred --CC---HHHHHHHHHHhCCEEEecccccCCCCCCCeEEEE--Eec---CHHHHHHHHHHH
Confidence 11 234655555 56899988421 23578874 444 347777777763
No 238
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=92.32 E-value=2.2 Score=42.11 Aligned_cols=49 Identities=12% Similarity=-0.071 Sum_probs=30.7
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HH--HhhcCCccccceeeechhHHH
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQ--KDFKGSFWDKLIVHTSTCTFE 60 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~--KaLgGG~~PigAv~~~~eI~d 60 (329)
..+|+++|+|++|+ +|-. .++..+..+| ++ |.+ |. ..+|++.++++...
T Consensus 169 ~~~g~~livD~a~a-~g~~----~~~~~~~~~D~~~~s~~K~~-gp-~G~G~l~~~~~~~~ 222 (402)
T TIGR02006 169 RERKVFFHVDAAQS-VGKI----PINVNELKVDLMSISGHKIY-GP-KGIGALYVRRKPRV 222 (402)
T ss_pred HHcCCEEEEEcchh-cCCc----ccCccccCCCEEEEehhhhc-CC-CceEEEEEccCCCC
Confidence 46799999999996 4322 2223345678 23 954 32 24788888876443
No 239
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=92.28 E-value=3.9 Score=40.57 Aligned_cols=173 Identities=9% Similarity=-0.003 Sum_probs=81.4
Q ss_pred cccceEEehhHhhchhccchh-hhhcccCCcch------HHHhh-cCCccccceeee------chhHHHhhhhhhhccCC
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF------VQKDF-KGSFWDKLIVHT------STCTFENFIKIKYQILK 71 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD------i~KaL-gGG~~PigAv~~------~~eI~d~~~~~~~~~~~ 71 (329)
.+|+++|.||+...|-..|.. .....+.-..+ ++|.+ ..| +=+|.+++ .+++.+.+.. ...
T Consensus 208 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pG-lRlG~~i~~~p~~~~~~~~~~~~~--~~~-- 282 (412)
T PTZ00433 208 ELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPG-WRLGWLLLVDPHGNGGDFLDGMKR--LGM-- 282 (412)
T ss_pred HcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCC-eeEEEEEEeCCcccHHHHHHHHHH--Hhh--
Confidence 579999999999877433321 11111110112 67998 566 47888886 2345554432 100
Q ss_pred CCccchhhhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCC
Q psy7882 72 TPAHKLKISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLN 146 (329)
Q Consensus 72 ~~~hg~T~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~ 146 (329)
...+.++.+. .+++.++.. +.+++ .+++++.-+.+.+.|+ ++..+.-+.- -|+++-+.+....-. .+
T Consensus 283 ~~~~~~~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~----~~~~~~~~~p~gg~f~~~~l~~~~~~--~~- 354 (412)
T PTZ00433 283 LVCGPCSVVQ-AALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIG----ECIGLSPTMPRGSMFLMSRLDLEKFR--DI- 354 (412)
T ss_pred ccCCCChHHH-HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHh----cCCCCcccCCCeeEEEEEEechhhcC--CC-
Confidence 0111122211 122233321 22222 2233333333333333 3322222222 256666666321000 00
Q ss_pred hHHHHHHHHHHH-HCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCK-EHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~-e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.-...++..|. ++||++.++.. ..+.+|+. + .. .++++++.++..
T Consensus 355 -~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis--~--~~-~~e~l~~al~~l 402 (412)
T PTZ00433 355 -KSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLT--I--SR-PVEVLREAVERI 402 (412)
T ss_pred -CCHHHHHHHHHHhcCEEEeCccccCCCCeEEEE--e--cC-CHHHHHHHHHHH
Confidence 01245777877 58999987532 24567764 2 21 367888888764
No 240
>PLN02242 methionine gamma-lyase
Probab=92.05 E-value=0.37 Score=48.61 Aligned_cols=130 Identities=12% Similarity=-0.001 Sum_probs=70.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhhhhhhccCCCCccc-h
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFIKIKYQILKTPAHK-L 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~~~~~~~hg-~ 77 (329)
..+|+++|.||+++.+ ..+. ..+| .| ++|.++|+...+ |++++++++++.+.. ..++ .
T Consensus 190 ~~~gi~livDea~~~~-~~~~----~~~g--~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~--------~~~~~~ 254 (418)
T PLN02242 190 HEKGVTVVVDNTFAPM-VLSP----ARLG--ADVVVHSISKFISGGADIIAGAVCGPAELVNSMMD--------LHHGAL 254 (418)
T ss_pred HHhCCEEEEECCCCcc-CCCH----HHcC--CcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHH--------Hhhhhh
Confidence 4579999999998644 2211 1223 46 569998765565 778888888777653 1111 1
Q ss_pred hhhc-c-HHHHHHHH--h-hHHh-HHHHHHHHHHHHHHHHHHHH--HhCCce----------eeE---EeeceeeEEEee
Q psy7882 78 KISD-T-VRPHVQIK--K-SVLE-RFVHTYVVGNFLLTHLSKLR--EEFAIV----------GDV---RGKGLMIGVDLV 136 (329)
Q Consensus 78 T~ag-n-lA~aaala--~-~ile-~le~v~~lG~~L~~gL~eL~--~~~p~v----------~~V---RG~GLm~gIef~ 136 (329)
.+.| . ....+++. . +.+. ++++..+...++.+.|++.- -.||.. ... +|.|.|++|++.
T Consensus 255 ~~~g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~ 334 (418)
T PLN02242 255 MLLGPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMD 334 (418)
T ss_pred hccCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEEC
Confidence 1112 1 11112111 1 2222 25566667777777776641 012210 112 388999999994
Q ss_pred cCCCCCCCCChHHHHHHHHHHH
Q psy7882 137 QDKETKVPLNSRHMTHILDSCK 158 (329)
Q Consensus 137 ~d~~~~~p~~~~~~~~~~~~l~ 158 (329)
. .+.+.+|+..+.
T Consensus 335 ~---------~~~~~~f~~~l~ 347 (418)
T PLN02242 335 T---------EERANRLMRYLQ 347 (418)
T ss_pred C---------HHHHHHHHHHhh
Confidence 2 134556666654
No 241
>PRK07337 aminotransferase; Validated
Probab=92.03 E-value=3.2 Score=40.59 Aligned_cols=172 Identities=10% Similarity=0.036 Sum_probs=86.9
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
.+++++|.||+..+|.-.+.... .....++ ++|.++ .|+ =+|.+++.+++.+.+...... ...+.++
T Consensus 194 ~~~~~ii~De~y~~~~~~~~~~~--~~~~~~~vi~~~S~SK~~~~~G~-RiG~~~~~~~l~~~l~~~~~~---~~~~~s~ 267 (388)
T PRK07337 194 ARGGFTIVDEIYQGLSYDAAPVS--ALSLGDDVITINSFSKYFNMTGW-RLGWLVVPEALVGTFEKLAQN---LFICASA 267 (388)
T ss_pred HCCCEEEEeccccccccCCCCcC--hhhccCCEEEEEechhhcCCchh-heeeeecCHHHHHHHHHHHHH---hccCCCh
Confidence 57899999999887754332111 1122344 579985 563 689999999888876531000 0111222
Q ss_pred hhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882 79 ISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLNSRHMTHI 153 (329)
Q Consensus 79 ~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~~~~~~~~ 153 (329)
.+. .++++++.. +.+++ .+..++.-+++.+.|++ ++....+ -.-|+++-+++...... ...+ ...+
T Consensus 268 ~~q-~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~----~~~~~~~~p~~g~f~~~~~~~~~~~-~~~~---~~~~ 338 (388)
T PRK07337 268 LAQ-HAALACFEPDTLAIYERRRAEFKRRRDFIVPALES----LGFKVPVMPDGAFYVYADCRGVAHP-AAGD---SAAL 338 (388)
T ss_pred HHH-HHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHh----cCCccccCCCeeEEEEEecccccCC-CCCC---HHHH
Confidence 221 223333432 12222 22333444444444443 3322112 23477787887421000 0011 2346
Q ss_pred HHH-HHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDS-CKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~-l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
... +.++||.+.+... ..+.+|+. +.. +++++.+.++.+
T Consensus 339 ~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~----~~~-~~~~l~~~l~rl 383 (388)
T PRK07337 339 TQAMLHDAGVVLVPGRDFGPHAPRDYIRLS----YAT-SMSRLEEAVARL 383 (388)
T ss_pred HHHHHHhCCEEEeCchhhCCCCCCCEEEEE----ecC-CHHHHHHHHHHH
Confidence 655 4578999977421 13567764 222 467888887764
No 242
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=91.80 E-value=5.6 Score=39.26 Aligned_cols=52 Identities=6% Similarity=-0.199 Sum_probs=33.4
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcc--h-------HHHhhc-CCccccceeeechhHH
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICR--F-------VQKDFK-GSFWDKLIVHTSTCTF 59 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~P--D-------i~KaLg-GG~~PigAv~~~~eI~ 59 (329)
.||+++|.||+...|-..+... .....+.+ | ++|.++ .| +-+|.+++++++.
T Consensus 204 ~~~~~iI~De~y~~~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~g~pG-lRiG~~i~~~~l~ 265 (402)
T TIGR03542 204 EHGSLILFDAAYSAFISDPSLP-HSIFEIPGAKECAIEFRSFSKTAGFTG-VRLGWTVVPKELT 265 (402)
T ss_pred HcCeEEEEEchhhhhccCCCCC-cchhhCCCCcccEEEEecCccccCCCC-cceEEEEecHHHh
Confidence 4699999999998774322110 00111111 2 579996 77 4899999988765
No 243
>PRK07049 methionine gamma-lyase; Validated
Probab=91.55 E-value=1.8 Score=43.80 Aligned_cols=50 Identities=8% Similarity=-0.108 Sum_probs=32.4
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcC--CccccceeeechhHHHhhh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKG--SFWDKLIVHTSTCTFENFI 63 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgG--G~~PigAv~~~~eI~d~~~ 63 (329)
+++++|+||+..++-... .. .+| .| ++|.++| |+ =+|.+++++++.+.+.
T Consensus 209 ~~~~vvvDety~~~~~~~---pl-~~g--~divv~S~SK~~gG~~gl-r~G~vv~~~~l~~~l~ 265 (427)
T PRK07049 209 HRPIIACDNTLLGPVFQK---PL-EHG--ADLSVYSLTKYVGGHSDL-VAGAVLGRKALIRQVR 265 (427)
T ss_pred CCCEEEEECCccccccCC---cc-ccC--CCEEEEcCceeecCCCCc-EEEEEECCHHHHHHHH
Confidence 689999999855432111 11 112 46 5699995 43 4688888888877665
No 244
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=91.22 E-value=1 Score=45.05 Aligned_cols=53 Identities=19% Similarity=-0.068 Sum_probs=32.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~ 63 (329)
..+|+++|+||.+..+. .+ .....-.| +.|.++|....+ |++++++++++.+.
T Consensus 176 ~~~gi~livD~t~a~~~-~~-----~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~ 234 (398)
T PRK08249 176 KKVGALVVVDNTFATPI-NQ-----NPLALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVY 234 (398)
T ss_pred HHcCCEEEEECCcCccc-cC-----CchhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHH
Confidence 35799999999977331 11 11122356 359998632234 56667778777654
No 245
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=91.16 E-value=0.78 Score=45.79 Aligned_cols=114 Identities=14% Similarity=0.070 Sum_probs=59.5
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccc-eeeechhHHHh-hhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKL-IVHTSTCTFEN-FIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pig-Av~~~~eI~d~-~~~~~~~~~~~~~hg~ 77 (329)
..+|+++|+||++.-+ -.... ...-.| +.|.++|.-..+| +++++++.... +.. .. ..+|.
T Consensus 177 ~~~gi~lvvD~a~a~~-~~~~~-----~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~--~~----~~~g~ 244 (398)
T PRK07504 177 NQAGAKLVVDNVFATP-LFQKP-----LELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQD--YF----RHTGP 244 (398)
T ss_pred HHcCCEEEEECCcccc-ccCCc-----hhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHH--HH----HHhCC
Confidence 4579999999998622 11111 112246 3599987324674 56666665432 221 00 01121
Q ss_pred hhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCcee------------------eEEeeceeeEEEee
Q psy7882 78 KISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVG------------------DVRGKGLMIGVDLV 136 (329)
Q Consensus 78 T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~------------------~VRG~GLm~gIef~ 136 (329)
..+ ..++.++.. +.+.. +++..+....+.+.|++ ||.|. ..+|.|.|+.|++.
T Consensus 245 --~~s~~~A~~~l~~L~tl~~R~~~~~~na~~la~~L~~----~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~ 318 (398)
T PRK07504 245 --SLSPFNAWTLLKGLETLPVRVRQQTESAAAIADFLAG----HPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELK 318 (398)
T ss_pred --CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHc----CCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeC
Confidence 122 344444444 33332 55555656666555543 33322 24577899999995
No 246
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=90.93 E-value=3.6 Score=40.45 Aligned_cols=171 Identities=16% Similarity=0.100 Sum_probs=88.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCccc-cceeeechhHHHhhhhhhhc-c-CCCC---
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFWD-KLIVHTSTCTFENFIKIKYQ-I-LKTP--- 73 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~P-igAv~~~~eI~d~~~~~~~~-~-~~~~--- 73 (329)
.++|+++|+|=||+ +|- .-.-.+. -|+ -|.+++ . | ++.+..+++.++.+.+...+ . .+.+
T Consensus 152 ~~~g~~~iVDavqs-~g~--~~idv~~----~D~~~~s~~K~lg~-~-~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~ 222 (361)
T TIGR01366 152 GSDDALVVIDATSG-AGG--LPVDIAE----TDVYYFAPQKNFAS-D-GGLWLAIMSPAALERIEAIAASGRWVPEFLSL 222 (361)
T ss_pred ccCCCeEEEEcCcc-ccC--CCCCHHH----CCEEEEEchhhcCC-C-CceEEEEECHHHHhhhhcccCCCCCCchhhhH
Confidence 35799999999998 321 1111221 362 298763 2 3 34555688877654420000 0 0000
Q ss_pred -------ccchhhhc-cH----HHHHHHHh--hH--HhH-HHHHHHHHHHHHHHHHHHHHhCCceee--EEeeceeeEEE
Q psy7882 74 -------AHKLKISD-TV----RPHVQIKK--SV--LER-FVHTYVVGNFLLTHLSKLREEFAIVGD--VRGKGLMIGVD 134 (329)
Q Consensus 74 -------~hg~T~ag-nl----A~aaala~--~i--le~-le~v~~lG~~L~~gL~eL~~~~p~v~~--VRG~GLm~gIe 134 (329)
..+.|++. ++ ++.++++- +. ++. .++.+++.++++++|+++..-.+.+.. .+ ......+.
T Consensus 223 ~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~-s~~v~~v~ 301 (361)
T TIGR01366 223 PTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKR-SQVVGTID 301 (361)
T ss_pred HHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhc-ccceEEEE
Confidence 00122222 23 33444432 11 222 466777777787777776311111111 11 12234455
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHCCceeeccC--CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG--LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G--~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|. +. ++ ...+...+.++||.+.+.. ..++++|+..-... |.+||+.+++++
T Consensus 302 ~~-~g-----~~---~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~---t~~di~~l~~al 354 (361)
T TIGR01366 302 FV-DD-----ID---AATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAI---DPDDVEALTECV 354 (361)
T ss_pred CC-Cc-----cC---HHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCC---CHHHHHHHHHHH
Confidence 53 21 11 3447777888999885421 12468999876554 689999999986
No 247
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=90.82 E-value=0.8 Score=45.87 Aligned_cols=114 Identities=18% Similarity=0.043 Sum_probs=59.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHH-hhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFE-NFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d-~~~~~~~~~~~~~~hg~ 77 (329)
..+|+++|+||++.-. -... .. .+| .| ..|.++|.-..+ |+++++++... .+.. .. ..+|.
T Consensus 182 ~~~g~~vivD~a~a~~-~~~~--~~-~~g--aDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~--~~----~~~g~ 249 (403)
T PRK07810 182 HAAGAKVVLDNVFATP-LLQR--GL-PLG--ADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQK--LM----RHTGP 249 (403)
T ss_pred HHcCCEEEEECCCCcc-ccCC--hh-hcC--CcEEEccCCceecCCcCceeEEEEeChHHHHHHHHH--HH----HHhCC
Confidence 3579999999997511 1111 11 223 47 349998622245 66777776543 2221 00 01121
Q ss_pred hhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE------------------eeceeeEEEee
Q psy7882 78 KISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR------------------GKGLMIGVDLV 136 (329)
Q Consensus 78 T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR------------------G~GLm~gIef~ 136 (329)
+ .+ ..++.++.. +.+.. +++-.+....+.+.| +.||.|..|. |.|.|+.+++.
T Consensus 250 ~--~s~~~a~l~l~~L~tl~~R~~~~~~~a~~~a~~L----~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~ 323 (403)
T PRK07810 250 A--LSAFNAWVLLKGLETLALRVRHSNASALRIAEFL----EGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELD 323 (403)
T ss_pred C--CCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHH----hcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence 1 12 333334443 33322 444445444444433 4567666665 88999999995
No 248
>PLN02452 phosphoserine transaminase
Probab=89.99 E-value=1.9 Score=42.82 Aligned_cols=168 Identities=12% Similarity=0.008 Sum_probs=90.8
Q ss_pred cceEEehhHhhchhccchhhhhcccCCcchH---HHhhcCCccc-cceeeechhHHHhhhhhhhccCCC---Cccchhh-
Q psy7882 8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRFV---QKDFKGSFWD-KLIVHTSTCTFENFIKIKYQILKT---PAHKLKI- 79 (329)
Q Consensus 8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi---~KaLgGG~~P-igAv~~~~eI~d~~~~~~~~~~~~---~~hg~T~- 79 (329)
++++|+|=|++=.++ -.-.+.+|+ |+ -|.+ | .| ++++.+|+++.+............ ..+.++|
T Consensus 170 ~~~lvVDa~Ss~g~~---pidv~~~~v--~~~saqK~l--G-P~Gl~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 241 (365)
T PLN02452 170 NVPLVADMSSNFLSK---PVDVSKYGV--IYAGAQKNV--G-PSGVTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYN 241 (365)
T ss_pred CCeEEEECCccccCc---ccCHHHcCE--EEEeccccc--C-CCCeEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccC
Confidence 579999999884433 344566776 63 2988 3 35 899999999886543200000000 0122333
Q ss_pred hccHHHHHHHH-h-hHHh------H-HHHHHHHHHHHHHHHHHHHHhCCc-ee-eEEeeceeeEEEeecCCCCCCCCChH
Q psy7882 80 SDTVRPHVQIK-K-SVLE------R-FVHTYVVGNFLLTHLSKLREEFAI-VG-DVRGKGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 80 agnlA~aaala-~-~ile------~-le~v~~lG~~L~~gL~eL~~~~p~-v~-~VRG~GLm~gIef~~d~~~~~p~~~~ 148 (329)
+-++....++. . +.++ . .++-+++.++|.++|++...=+.. +. +.|. ...+.+.+.. .+
T Consensus 242 TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs-~~~vsF~~~~---------~~ 311 (365)
T PLN02452 242 TPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRS-LMNVPFTLGG---------SE 311 (365)
T ss_pred ChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhC-CeEEEEEcCC---------ch
Confidence 22332222222 2 3332 2 455666667777777653110111 11 1232 2334444321 13
Q ss_pred HHHHHHHHHHHCCceeeccC-CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCKEHGLLLGRGG-LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~e~GVLl~~~G-~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+|.+.+.++|++..+.- ..+. +|+. +..+.+.++++.+++..
T Consensus 312 ~~~~f~~~~~~~g~~~~~G~r~~gg-~R~s---~yna~~~~~v~~L~~~m 357 (365)
T PLN02452 312 LEAEFVKEAAKAGMVQLKGHRSVGG-MRAS---IYNAMPLAGVEKLVAFM 357 (365)
T ss_pred hHHHHHHHHHHCCCcccCCccccCc-eEEE---CcCCCCHHHHHHHHHHH
Confidence 56789999999999886531 1233 6664 45556789999999874
No 249
>PTZ00376 aspartate aminotransferase; Provisional
Probab=89.43 E-value=2.7 Score=41.65 Aligned_cols=57 Identities=5% Similarity=-0.120 Sum_probs=33.9
Q ss_pred ccccceEEehhHhhchhccch---hhhhcccCCcch-------HHHhhc-CCcccccee---eechhHHHhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT---YLGFQCLQICRF-------VQKDFK-GSFWDKLIV---HTSTCTFENF 62 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~---~fA~e~~GV~PD-------i~KaLg-GG~~PigAv---~~~~eI~d~~ 62 (329)
.+||+++|.||+...|-.-+. .-+...+.-.+| ++|.++ .|+ =+|.+ .+++++.+.+
T Consensus 206 ~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~Gl-RvG~~~~~~~~~~~~~~l 276 (404)
T PTZ00376 206 KRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGE-RIGALHIVCANKEEAANV 276 (404)
T ss_pred HhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCccccccc-ccceEEEEeCCHHHHHHH
Confidence 357999999999987743221 101111111122 679999 784 78887 5677655433
No 250
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=88.64 E-value=3.9 Score=40.74 Aligned_cols=51 Identities=12% Similarity=-0.056 Sum_probs=28.7
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeee-chhHHHhh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHT-STCTFENF 62 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~-~~eI~d~~ 62 (329)
.+|+++|+||++..... +.....-.| +.|.++|.- .-.|++++ ++++.+.+
T Consensus 165 ~~g~~vivDeay~~~~~------~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l 222 (386)
T PRK08045 165 EAGAVSVVDNTFLSPAL------QNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTEL 222 (386)
T ss_pred HcCCEEEEECCCCcccc------CCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHH
Confidence 46999999999764311 111222337 349987531 12466655 45555544
No 251
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=88.62 E-value=11 Score=37.03 Aligned_cols=173 Identities=6% Similarity=-0.038 Sum_probs=84.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch--------HHHh-hcCCccccceeeech------hHHHhhhhhhhcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF--------VQKD-FKGSFWDKLIVHTST------CTFENFIKIKYQI 69 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD--------i~Ka-LgGG~~PigAv~~~~------eI~d~~~~~~~~~ 69 (329)
..+|+++|.||+...|-..|.-+. ......|+ ++|. ...| +=+|.+++.. ++.+.+.. ..
T Consensus 198 ~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~~vi~~~SfSK~~~~~G-lRiG~iv~~~~~~~~~~~~~~~~~--~~- 272 (401)
T TIGR01264 198 ERQCLPIIADEIYGDMVFSGATFE-PLASLSSTVPILSCGGLAKRWLVPG-WRLGWIIIHDRRGILRDIRDGLVK--LS- 272 (401)
T ss_pred HHCCCEEEEEhhhhhhccCCcccc-cHHHcCCCCcEEEEccCcccCCCcc-ceEEEEEecCcchhHHHHHHHHHH--Hh-
Confidence 357999999999998854442111 01112232 5797 5555 4788888763 23333321 00
Q ss_pred CCCCccchhhhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCC
Q psy7882 70 LKTPAHKLKISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVP 144 (329)
Q Consensus 70 ~~~~~hg~T~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p 144 (329)
....+.++.+. .++++++.. +.+++ .+..++.-+++.+.|++ ++.+..+ -.-|+++-+.+....-. ..
T Consensus 273 -~~~~~~~~~~q-~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~----~~~~~~~~p~~g~f~~~~~~~~~~~-~~ 345 (401)
T TIGR01264 273 -QRILGPCTIVQ-GALPSILLRTPQEYFDGTLSVLESNAMLCYGALAA----VPGLRPVMPSGAMYMMVGIEMEHFP-EF 345 (401)
T ss_pred -hccCCCCcHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHh----CCCCcccCCCeeeEEEEEecccccC-CC
Confidence 00111122111 223333332 23332 33344444444444443 3322212 23477777776421000 00
Q ss_pred CChHHHHHHHHHHH-HCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 145 LNSRHMTHILDSCK-EHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 145 ~~~~~~~~~~~~l~-e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+ ...+...++ ++||++.++.. ..+.+|+. +.. .++++++.++.+
T Consensus 346 ~~---~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis--~~~---~~~~l~~~l~rl 393 (401)
T TIGR01264 346 KN---DVEFTERLVAEQSVFCLPGSCFEYPGFFRVV--LTV---PVVMMEEACSRI 393 (401)
T ss_pred CC---HHHHHHHHHHhCCEEEeCchhcCCCCeEEEE--EcC---CHHHHHHHHHHH
Confidence 01 234666765 78999987532 24667764 222 467888888764
No 252
>PRK09265 aminotransferase AlaT; Validated
Probab=88.47 E-value=12 Score=37.03 Aligned_cols=180 Identities=8% Similarity=-0.046 Sum_probs=81.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch--------HHHhh-cCCccccceeee--chhHHHhhhhhhhccCCCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF--------VQKDF-KGSFWDKLIVHT--STCTFENFIKIKYQILKTP 73 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD--------i~KaL-gGG~~PigAv~~--~~eI~d~~~~~~~~~~~~~ 73 (329)
..+|+++|.||+...|-..+..+ .......++ ++|.+ ..| +-+|.+++ .+++.+.+...........
T Consensus 198 ~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~vi~~~S~SK~~~~pG-lRiG~~v~~~~~~~~~~~~~~~~~~~~~~ 275 (404)
T PRK09265 198 RQHNLIIFADEIYDKILYDGAVH-ISIASLAPDLLCVTFNGLSKAYRVAG-FRVGWMVLSGPKKHAKGYIEGLDMLASMR 275 (404)
T ss_pred HHCCCEEEEehhhhhccCCCCCc-CCHHHcCCCceEEEEecchhhccCcc-cceEEEEEeCchHHHHHHHHHHHHHhccc
Confidence 35789999999998773323110 000112233 57999 456 47888875 3433222211000000000
Q ss_pred ccchhhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCCCCCCChHHH
Q psy7882 74 AHKLKISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKETKVPLNSRHM 150 (329)
Q Consensus 74 ~hg~T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~~~p~~~~~~ 150 (329)
.+.++.+. .++.+++.. +.+++ +...+.+-+. ++.+.+..+.++.+.-+. .-|+++-+.+..... +. ..-.
T Consensus 276 ~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~-r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~---~~-~~~~ 349 (404)
T PRK09265 276 LCANVPAQ-HAIQTALGGYQSINELILPGGRLYEQ-RDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVY---PI-HDDE 349 (404)
T ss_pred cCCCcHHH-HHHHHHhcCchhHHHHHHHHHHHHHH-HHHHHHHHhcCCCCcccCCCcceEEEEEeccccc---CC-CCHH
Confidence 11111111 233334432 22221 1111112111 223333333343322122 236666666642110 00 0112
Q ss_pred HHHHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+...+.++||++.++.. .++.+|+.= .. +++++++.++..
T Consensus 350 ~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~--~~---~~e~l~~~l~rl 395 (404)
T PRK09265 350 QFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVT--LP---RVDDLEEAIGRI 395 (404)
T ss_pred HHHHHHHHhCCEEEECchhhCCCCCCeEEEEe--CC---CHHHHHHHHHHH
Confidence 3466788899999987521 245677752 22 578888888874
No 253
>PRK06107 aspartate aminotransferase; Provisional
Probab=88.44 E-value=6.9 Score=38.64 Aligned_cols=176 Identities=8% Similarity=-0.035 Sum_probs=84.4
Q ss_pred cceEEehhHhhchhccchhhh-hccc--CCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882 8 DCGVVVSAVDFGSGDNGTYLG-FQCL--QICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 8 giLLI~DEVqTGfGRTG~~fA-~e~~--GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
++++|.||+...+...+..+. .... +.... ++|.++ .|+ =+|.+++.+++.+.+.. ... ....+.+
T Consensus 200 ~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGl-RiG~~~~~~~~~~~~~~--~~~-~~~~~~s 275 (402)
T PRK06107 200 HVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGW-RIGYAAGPADLIAAINK--LQS-QSSSCPS 275 (402)
T ss_pred CeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCccc-ceeeeecCHHHHHHHHH--HHH-hcccCCC
Confidence 899999999976533332111 1111 11111 579997 774 78989999999887764 110 0011222
Q ss_pred hhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCCh--HHHH
Q psy7882 78 KISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNS--RHMT 151 (329)
Q Consensus 78 T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~--~~~~ 151 (329)
+++. .+++.++.. ..+++ .+..++.-+.+.+.|++ ++.+.-.... |+.+-+.+..-.....|... ....
T Consensus 276 ~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (402)
T PRK06107 276 SISQ-AAAAAALNGDQSFVTESVAVYKQRRDYALALLNA----IPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQ 350 (402)
T ss_pred hHHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhc----CCCCcccCCCcceEEeeecccccccccccccCCCCHH
Confidence 2211 233334432 23332 23334443444444433 3322212222 55555555210000000000 0123
Q ss_pred HHHH-HHHHCCceeeccCCC--CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILD-SCKEHGLLLGRGGLS--GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~-~l~e~GVLl~~~G~~--~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.++. .+.++||.+.+.... .+.+|+.= .. +++++++.++..
T Consensus 351 ~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~--~~---~~e~l~~~l~~l 394 (402)
T PRK06107 351 DVVLYLLDSAGVAVVQGTAYGLSPYFRLSI--AT---SLETLEEACARI 394 (402)
T ss_pred HHHHHHHHhCCEEEeCccccCCCCeEEEEe--CC---CHHHHHHHHHHH
Confidence 4554 445789999885321 35677642 22 578999888864
No 254
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=88.20 E-value=8.6 Score=38.19 Aligned_cols=174 Identities=11% Similarity=-0.032 Sum_probs=80.9
Q ss_pred ccccceEEehhHhhchhccchhh-hhcccCCcch------HHHh-hcCCccccceeeec--hhHH------Hhhhhhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQICRF------VQKD-FKGSFWDKLIVHTS--TCTF------ENFIKIKYQ 68 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~GV~PD------i~Ka-LgGG~~PigAv~~~--~eI~------d~~~~~~~~ 68 (329)
..|++++|.||+...|-..|..+ ....+.-.+. ++|. ...| +-+|.+++. +.+. +.+.. ..
T Consensus 200 ~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pG-lRvG~~v~~~p~~~~~~~~~~~~~~~--~~ 276 (409)
T PLN00143 200 RKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPG-WGLGWLVTCDPSGLLQICEIADSIKK--AL 276 (409)
T ss_pred HHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCc-cceEEEEeeCchhhhhhHHHHHHHHH--HH
Confidence 35799999999998874433211 1111211111 6799 5666 489988873 2332 22221 00
Q ss_pred cCCCCccchhhhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-E-eeceeeEEEeecCCCCC
Q psy7882 69 ILKTPAHKLKISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-R-GKGLMIGVDLVQDKETK 142 (329)
Q Consensus 69 ~~~~~~hg~T~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-R-G~GLm~gIef~~d~~~~ 142 (329)
.....+++.+. .+.++++.. +.+++ .+.+++.-+++.+.|+ +.+..... + .-|+++-+.+.....
T Consensus 277 --~~~~~~~~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~----~~~~~~~~~~p~gg~f~w~~l~~~~~-- 347 (409)
T PLN00143 277 --NPAPFPPTFIQ-AAIPEILEKTTEDFFSKTINILRAALAFCYDKLK----EIPCIMCPQKAEGAFFALVKLNLLLL-- 347 (409)
T ss_pred --hccCCCCchHH-HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHh----cCCCCCCCCCCCeeEEEEEecchhhc--
Confidence 00011111111 223333331 23332 2223332233333333 23322111 1 236777777742100
Q ss_pred CCCChHHHHHH-HHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 143 VPLNSRHMTHI-LDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 143 ~p~~~~~~~~~-~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+ .....+ ...+.++||++.++.. ..+.+|+. +.. +++++++.++..
T Consensus 348 ~~~--~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~--~~~---~~~~l~~al~rl 398 (409)
T PLN00143 348 EDI--EDDMEFCLKLAKEESLIILPGVTVGLKNWLRIT--FAV---EQSSLEDGLGRL 398 (409)
T ss_pred CCC--CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEE--EcC---CHHHHHHHHHHH
Confidence 000 012234 4555789999988531 24677775 222 478888888764
No 255
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=88.11 E-value=7.2 Score=39.44 Aligned_cols=135 Identities=16% Similarity=0.090 Sum_probs=71.2
Q ss_pred HHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh---cc-HHHHHHHHh-h-HHhH--HHHHHHHHHHHHHH
Q psy7882 39 QKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS---DT-VRPHVQIKK-S-VLER--FVHTYVVGNFLLTH 110 (329)
Q Consensus 39 ~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a---gn-lA~aaala~-~-ile~--le~v~~lG~~L~~g 110 (329)
+|.---|- -++++.++++-++.+..+ ....|.+ -| +.-+..+.. + -++. -.|.+-+...|..-
T Consensus 253 SKITf~Ga-Gva~~aaS~~Nl~~~~~~--------~~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V 323 (425)
T PF12897_consen 253 SKITFPGA-GVAFFAASEANLAWIKKH--------LSVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAV 323 (425)
T ss_dssp TTTS-TTS-S-EEEEE-HHHHHHHHHH--------HHHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCc-ceeeeecCHHHHHHHHHH--------hcCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHH
Confidence 35544442 578888888777665531 0011111 12 343444444 3 2322 34556666666655
Q ss_pred HHHHHHhCC----ce-eeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccC--------CCCCEEEEe
Q psy7882 111 LSKLREEFA----IV-GDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG--------LSGNTLTAL 177 (329)
Q Consensus 111 L~eL~~~~p----~v-~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G--------~~~nvIrl~ 177 (329)
++.|.++.+ +. +..--=|.++.++..+ ..+.++++.|.+.||.+.++| +...-||++
T Consensus 324 ~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~----------G~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiA 393 (425)
T PF12897_consen 324 LEILEEELGDGLGIASWTKPKGGYFISLDVLD----------GTAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIA 393 (425)
T ss_dssp HHHHHHHHGTGGTSEEE---SBSS-EEEEEST----------T-HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE-
T ss_pred HHHHHHhcCCCCCeeEecCCCCceEEEEecCC----------ChHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEec
Confidence 555544433 21 2222337777777653 357889999999999999876 356789999
Q ss_pred CccccCcCCHHHHHHHHhc
Q psy7882 178 QPKLLNYWTDFVGTPCLDC 196 (329)
Q Consensus 178 PPL~It~~t~eeId~~l~~ 196 (329)
|.+-. .+|++..+++
T Consensus 394 PS~P~----leel~~Am~~ 408 (425)
T PF12897_consen 394 PSYPS----LEELETAMDV 408 (425)
T ss_dssp -SSS-----HHHHHHHHHH
T ss_pred CCCCC----HHHHHHHHHH
Confidence 98764 6899998885
No 256
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=87.99 E-value=4.9 Score=40.32 Aligned_cols=53 Identities=11% Similarity=-0.056 Sum_probs=29.8
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCC-ccccceeee-chhHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGS-FWDKLIVHT-STCTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG-~~PigAv~~-~~eI~d~~~ 63 (329)
..+|+++|.||++..-... .-...-.|+ .|.++|. -.-.|++++ ++++.+.+.
T Consensus 172 ~~~gi~vIvD~a~a~~~~~------~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~ 231 (405)
T PRK08776 172 HKVGALTVVDNTFLSPALQ------KPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLV 231 (405)
T ss_pred HHcCCEEEEECCCcccccC------CcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHH
Confidence 3579999999998632111 111123473 3999763 123466655 456666553
No 257
>PRK06855 aminotransferase; Validated
Probab=87.63 E-value=8.7 Score=38.57 Aligned_cols=48 Identities=8% Similarity=-0.087 Sum_probs=30.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch--------HHHhhc-CCccccceeee
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF--------VQKDFK-GSFWDKLIVHT 54 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD--------i~KaLg-GG~~PigAv~~ 54 (329)
.+||+++|.||+...+-..|.-+. ....+.|| ++|.++ .|+ =+|.+++
T Consensus 201 ~~~~~~II~De~Y~~l~~~~~~~~-sl~~~~~~~~~I~~~S~SK~~~~pGl-RiG~ii~ 257 (433)
T PRK06855 201 REYDLFIICDEIYNNIVYNGKKTV-PLSEVIGDVPGIALKGISKELPWPGS-RCGWIEV 257 (433)
T ss_pred HHcCCEEEEeccccccccCCCCCC-CHHHHcCcCCeEEEecCccccCCCcc-eEEEEEE
Confidence 457999999999988843342110 00112233 679996 774 7888886
No 258
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=87.55 E-value=3.1 Score=41.35 Aligned_cols=52 Identities=17% Similarity=-0.107 Sum_probs=29.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCC-ccccceeeec-hhHHHhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGS-FWDKLIVHTS-TCTFENF 62 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG-~~PigAv~~~-~eI~d~~ 62 (329)
..+|+++|+||++... -.+. ..+.-.| +.|.++|. -.-.|+++++ +++.+.+
T Consensus 173 ~~~gi~lIvD~a~a~~-~~~~-----p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~ 231 (388)
T PRK07811 173 HDAGAKVVVDNTFASP-YLQQ-----PLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAF 231 (388)
T ss_pred HHcCCEEEEECCCCcc-ccCC-----chhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHH
Confidence 3579999999987532 1111 1222356 45999862 1124666664 5555543
No 259
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=87.36 E-value=8.3 Score=39.70 Aligned_cols=40 Identities=15% Similarity=0.048 Sum_probs=27.2
Q ss_pred HHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+...|.++||++.++.. ..+.+|+. +.. +++++.+.++..
T Consensus 465 ~~~ll~~~gV~v~pg~~F~~~~~~~~Ris--~~~---~~~~l~~a~~rl 508 (517)
T PRK13355 465 ALDLLHDKKVLIVQGTGFNWDKPDHFRVV--YLP---RLEDLEDAMDRL 508 (517)
T ss_pred HHHHHHhCCEEEeCcchhCCCCcCEEEEE--eCC---CHHHHHHHHHHH
Confidence 45667789999987521 24678875 332 578888888764
No 260
>PLN02724 Molybdenum cofactor sulfurase
Probab=86.82 E-value=19 Score=39.52 Aligned_cols=172 Identities=13% Similarity=0.026 Sum_probs=87.5
Q ss_pred ceEEehhHhhchhccchhhhhcccCCcchH---H--HhhcCCccccceeeechhHHHhhhhhhhccCC------------
Q psy7882 9 CGVVVSAVDFGSGDNGTYLGFQCLQICRFV---Q--KDFKGSFWDKLIVHTSTCTFENFIKIKYQILK------------ 71 (329)
Q Consensus 9 iLLI~DEVqTGfGRTG~~fA~e~~GV~PDi---~--KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~------------ 71 (329)
+++++|=+|+ .|.. ....-.+.+|+ + |-++ |=.-+|++.++++..+.+.+...+...
T Consensus 231 ~~v~vDaaQ~-~g~~----piDv~~~~~Dfl~~S~HK~~G-gP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~ 304 (805)
T PLN02724 231 WMVLLDAAKG-CGTS----PPDLSRYPADFVVVSFYKIFG-YPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVK 304 (805)
T ss_pred eEEEeehhhh-cCCC----CCChhhcCCCEEEEecceecc-CCCCceEEEEehhhhhhhcCCccCCCceEEEecccceee
Confidence 5788888776 3321 22222345782 2 9654 311269999999887655431001000
Q ss_pred ------CCccchhhhcc--HHHHHHHHhhHHhH------HHHHHHHHHHHHHHHHHHHHhC--CceeeE----------E
Q psy7882 72 ------TPAHKLKISDT--VRPHVQIKKSVLER------FVHTYVVGNFLLTHLSKLREEF--AIVGDV----------R 125 (329)
Q Consensus 72 ------~~~hg~T~agn--lA~aaala~~ile~------le~v~~lG~~L~~gL~eL~~~~--p~v~~V----------R 125 (329)
...-.+|.+-. +++.++++ .+++ .++...+.++|.++|.++.... |.+ .+ .
T Consensus 305 ~~~~~~~rfE~GT~n~~~i~~l~aal~--~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v-~iyg~~~~~~~~~ 381 (805)
T PLN02724 305 RRERVEQRFEDGTISFLSIAALRHGFK--LLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVC-VLYGNHTFKLEFH 381 (805)
T ss_pred ccccHHHHhcCCCcchhHHHHHHHHHH--HHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEE-EEcCCCCCCCCcc
Confidence 00011222211 34444443 3322 4577888888888888763111 111 11 1
Q ss_pred eeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC------------------------------------
Q psy7882 126 GKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL------------------------------------ 169 (329)
Q Consensus 126 G~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~------------------------------------ 169 (329)
.+|.++++.+....+. ... ...+...+-++||.++..-+
T Consensus 382 ~r~~ivsFnv~~~~~~--~v~---~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~ 456 (805)
T PLN02724 382 IQGPIVTFNLKRADGS--WVG---HREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHG 456 (805)
T ss_pred cccCEEEEEEEcCCCC--EeC---HHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecC
Confidence 2566777777532211 011 11233333455666653110
Q ss_pred -CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 170 -SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 170 -~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...++|+..-+.. |.+|||.+++++
T Consensus 457 ~~~G~vRvS~g~yn---t~eDvd~lv~~l 482 (805)
T PLN02724 457 RPTGAVRVSFGYMS---TFEDCQKFIDFI 482 (805)
T ss_pred cccceEEEEcCccC---CHHHHHHHHHHH
Confidence 1267888877765 689999999974
No 261
>PRK14012 cysteine desulfurase; Provisional
Probab=86.69 E-value=3.3 Score=40.84 Aligned_cols=48 Identities=10% Similarity=-0.121 Sum_probs=29.0
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHH
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTF 59 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~ 59 (329)
.++|+++|.|++|+ +|.. ........+| ..|.++.+ .+|+++++++..
T Consensus 171 ~~~g~~vivD~a~~-~g~~----~~~~~~~~~D~~~~s~~K~~gp~--g~G~l~~~~~~~ 223 (404)
T PRK14012 171 RERGIIFHVDAAQS-VGKV----PIDLSKLKVDLMSFSAHKIYGPK--GIGALYVRRKPR 223 (404)
T ss_pred HHcCCEEEEEcchh-cCCc----ccCcccCCCCEEEEehhhccCCC--ceEEEEEecCCC
Confidence 35799999999997 3322 1111123478 23966432 578888887643
No 262
>PLN02187 rooty/superroot1
Probab=86.15 E-value=15 Score=37.38 Aligned_cols=178 Identities=10% Similarity=0.017 Sum_probs=82.1
Q ss_pred ccccceEEehhHhhchhccchhh-hhccc-CCcc----h-HHHh-hcCCccccceeeec--hhHH---HhhhhhhhccCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCL-QICR----F-VQKD-FKGSFWDKLIVHTS--TCTF---ENFIKIKYQILK 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~-GV~P----D-i~Ka-LgGG~~PigAv~~~--~eI~---d~~~~~~~~~~~ 71 (329)
..||+++|.||+...+-..|..+ ....+ ...| . ++|. ...| +-+|.+++. +.++ +.+....... .
T Consensus 234 ~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pG-lRiG~~v~~~p~~~~~~~~~~~~~~~~~-~ 311 (462)
T PLN02187 234 RKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPG-WKIGWIALNDPEGVFETTKVLQSIKQNL-D 311 (462)
T ss_pred HHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCcc-ceeEEEEecCchhHHHHHHHHHHHHHhc-c
Confidence 35799999999998853333211 11111 1111 1 6799 6666 489988873 2222 2222100000 0
Q ss_pred CCccchhhhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-Ee-eceeeEEEeecCCCCCCCC
Q psy7882 72 TPAHKLKISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RG-KGLMIGVDLVQDKETKVPL 145 (329)
Q Consensus 72 ~~~hg~T~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG-~GLm~gIef~~d~~~~~p~ 145 (329)
....+++++. .+++++++. +.+++ .+.+++.-+.+.+.|++ ++.+..+ .. -|.++-+.+..... ..+
T Consensus 312 ~~~~~s~~~Q-~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~----~~~~~~~~~P~gg~fl~~~l~~~~~--~~~ 384 (462)
T PLN02187 312 VTPDPATIIQ-AALPAILEKADKNFFAKKNKILKHNVDLVCDRLKD----IPCVVCPKKPESCTYLLTKLELSLM--DNI 384 (462)
T ss_pred ccCCCCHHHH-HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh----CCCCcCCCCCCEeEEEEeecChhhC--CCC
Confidence 0001122222 333444432 23332 23333333444444443 3432211 22 24555555531100 001
Q ss_pred ChHHHHHHHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 146 NSRHMTHILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 146 ~~~~~~~~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
. .-...+...+.++||++.|+.. ..+.+||. +.. .++.+++.++.+
T Consensus 385 ~-~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis--~~~---~~e~l~~al~rL 432 (462)
T PLN02187 385 K-DDIDFCVKLAREENLVFLPGDALGLKNWMRIT--IGV---EAHMLEDALERL 432 (462)
T ss_pred C-CHHHHHHHHHhhCCEEEECccccCCCCeEEEE--eCC---CHHHHHHHHHHH
Confidence 0 0112234556789999987521 24678875 222 467888888864
No 263
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=85.14 E-value=8.2 Score=38.32 Aligned_cols=52 Identities=15% Similarity=-0.034 Sum_probs=28.7
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeee-chhHHHhhh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHT-STCTFENFI 63 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~-~~eI~d~~~ 63 (329)
.+|+++|+||++..+-.. .....-.| +.|.++|.- +-.|++.+ .+++.+.+.
T Consensus 164 ~~g~~vvvD~a~~~~~~~------~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~ 222 (382)
T TIGR02080 164 AVGAVVVVDNTFLSPALQ------NPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELA 222 (382)
T ss_pred HcCCEEEEECCCcccccC------CchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHH
Confidence 579999999998522111 11112246 459887631 12465555 456655443
No 264
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=84.77 E-value=3.3 Score=40.89 Aligned_cols=114 Identities=14% Similarity=0.111 Sum_probs=59.7
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeee-chhHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHT-STCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~-~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
..+|+++|+||.+. ++.. +...+.-.| ..|.++|.---+ |++++ ++++++.+.. .. ..+|.
T Consensus 163 ~~~gi~vvvD~t~~----~~~~--~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~--~~----~~~G~ 230 (364)
T PRK07269 163 HAKGAKVIVDNTFY----SPIY--QRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFY--NL----NTTGA 230 (364)
T ss_pred HHcCCEEEEECCCc----cccc--CCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHH--HH----HHhCC
Confidence 35799999999842 1111 233344567 349998621123 55565 4566655432 10 01121
Q ss_pred hhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE--eeceeeEEEee
Q psy7882 78 KISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR--GKGLMIGVDLV 136 (329)
Q Consensus 78 T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR--G~GLm~gIef~ 136 (329)
..+ +.+..++.. +-++. +++..+....+.+ ..+.||.+..|. |.|.|++|++.
T Consensus 231 --~~s~~~a~l~~~~L~tL~~r~~~~~~na~~~a~----~L~~~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 231 --VLSPFDSYLLMRGLKTLSLRMERSTANAQEVVA----FLKKSPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred --CCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH----HHHhCCCccEEeCCCcCcEEEEEEC
Confidence 122 444333333 33332 4444444444444 345688776665 78999999984
No 265
>PLN02656 tyrosine transaminase
Probab=84.60 E-value=15 Score=36.50 Aligned_cols=175 Identities=10% Similarity=0.004 Sum_probs=84.5
Q ss_pred ccccceEEehhHhhchhccchhh-hhcccC-----Ccch-HHHh-hcCCccccceeeec--------hhHHHhhhhhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQ-----ICRF-VQKD-FKGSFWDKLIVHTS--------TCTFENFIKIKYQ 68 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~G-----V~PD-i~Ka-LgGG~~PigAv~~~--------~eI~d~~~~~~~~ 68 (329)
..||+++|.||+...|-..|.-+ ....++ |.=. ++|. ...| +=+|.+++. +++.+.+.. ..
T Consensus 199 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pG-lRiG~~i~~~~~~~~~~~~~~~~~~~--~~ 275 (409)
T PLN02656 199 EKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPG-WRLGWFVTTDPSGSFRDPKIVERIKK--YF 275 (409)
T ss_pred HHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcc-eeEEEEEEeCcccccccHHHHHHHHH--HH
Confidence 45799999999998874333211 111111 1111 6798 6666 478988873 466665542 10
Q ss_pred cCCCCccchhhhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCcee-eEEee-ceeeEEEeecCCCCC
Q psy7882 69 ILKTPAHKLKISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVG-DVRGK-GLMIGVDLVQDKETK 142 (329)
Q Consensus 69 ~~~~~~hg~T~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~-GLm~gIef~~d~~~~ 142 (329)
. ...+.++++. .+++++++. +.+++ .+..++.-+.+.+.|+ +++... .++.. |+++-+.+......
T Consensus 276 ~--~~~~~s~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~----~~~~~~~~~~p~gg~~~w~~l~~~~~~- 347 (409)
T PLN02656 276 D--ILGGPATFIQ-AAVPTILEQTDESFFKKTINILKQSSDICCDRIK----EIPCITCPHKPEGSMAVMVKLNLSLLE- 347 (409)
T ss_pred h--hhcCCCHHHH-HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHh----hCCCCcCCcCCCeEEEEEEecchhhcC-
Confidence 0 0111222211 333444442 23332 2233333333333333 333322 12333 56666666321000
Q ss_pred CCCChHHHHHHHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 143 VPLNSRHMTHILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 143 ~p~~~~~~~~~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+. .-...+...+.++||++.|... ..+.+|+.= .. +++++.+.++..
T Consensus 348 -~~~-~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~--~~---~~e~l~eal~rl 397 (409)
T PLN02656 348 -DIS-DDIDFCFKLAREESVIILPGTAVGLKNWLRITF--AA---DPSSLEEALGRI 397 (409)
T ss_pred -CCC-CHHHHHHHHHHhCCEEEecchhcCCCCeEEEEe--CC---CHHHHHHHHHHH
Confidence 000 1112345677889999988521 245677642 22 478888888764
No 266
>PRK07050 cystathionine beta-lyase; Provisional
Probab=84.39 E-value=2.4 Score=42.33 Aligned_cols=53 Identities=9% Similarity=-0.189 Sum_probs=31.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeee-chhHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHT-STCTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~-~~eI~d~~~ 63 (329)
..+|+++|+||.+.- |..+.-...| .| +.|.++||. .+.|++++ ++++++.+.
T Consensus 177 ~~~gi~livD~a~a~----~~~~~~l~~G--aDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~ 236 (394)
T PRK07050 177 RARGVVTAIDNTYSA----GLAFKPFEHG--VDISVQALTKYQSGGSDVLMGATITADAELHAKLK 236 (394)
T ss_pred HHcCCEEEEECCccc----ccccCHHHcC--CeEEEEECCceecCCCCeeEEEEEECCHHHHHHHH
Confidence 357999999999752 2111111224 26 469998663 35676776 566666543
No 267
>KOG1368|consensus
Probab=84.14 E-value=12 Score=36.69 Aligned_cols=136 Identities=12% Similarity=0.058 Sum_probs=71.4
Q ss_pred HHHhhcCCcccc-ceeeechhHHHhhhhhhhccCCCCccchhhhcc-HHHHHHHHh--hHHhHHHHHHHHHHHHHHHHHH
Q psy7882 38 VQKDFKGSFWDK-LIVHTSTCTFENFIKIKYQILKTPAHKLKISDT-VRPHVQIKK--SVLERFVHTYVVGNFLLTHLSK 113 (329)
Q Consensus 38 i~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~~~~~~~hg~T~agn-lA~aaala~--~ile~le~v~~lG~~L~~gL~e 113 (329)
++|+||. |+ |+++++.+..+.... .. -..|+.+-.. +-|++++-. +.+..+.+..+....|.++++.
T Consensus 223 LSKglgA---PVGSViVG~k~FI~kA~~--~R----KalGGGmRQsGvLaaaaLval~~~~~~L~~dHk~A~~lAe~~~~ 293 (384)
T KOG1368|consen 223 LSKGLGA---PVGSVIVGSKDFIDKARH--FR----KALGGGMRQSGVLAAAALVALDENVPLLRADHKRAKELAEYINT 293 (384)
T ss_pred hhccCCC---CcccEEEccHHHHHHHHH--HH----HHhcCchhHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhcc
Confidence 5799974 99 567777766554321 00 0223333333 334444433 2221144555666666666653
Q ss_pred HHHhCCceeeEE-eeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHH
Q psy7882 114 LREEFAIVGDVR-GKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTP 192 (329)
Q Consensus 114 L~~~~p~v~~VR-G~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~ 192 (329)
.- .+..+|- -.-=|..+++...+ -....++..+.++|+++... ....+|+.=-.-+ |+++++.
T Consensus 294 ~~---~i~v~v~a~etNiv~~~l~q~~--------~~~~~l~~~~~k~gi~lm~~--~s~r~Rivlh~Qv---t~~~ve~ 357 (384)
T KOG1368|consen 294 PE---EIRVEVPAVETNIVNMVLCQAR--------LTAEELCKFLEKNGILLMGG--ASRRIRIVLHHQV---TDEDVEY 357 (384)
T ss_pred cc---ceeeecchhhcceeeeeccccc--------CCHHHHHHHHHHCCeEEeec--cccceEEEEEEec---CHHHHHH
Confidence 21 0222332 11224455553221 12466888899999998763 2344555544445 5889998
Q ss_pred HHhccc
Q psy7882 193 CLDCES 198 (329)
Q Consensus 193 ~l~~~~ 198 (329)
++.+.+
T Consensus 358 ~~~~~~ 363 (384)
T KOG1368|consen 358 VKSVLS 363 (384)
T ss_pred HHHHHH
Confidence 888763
No 268
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=84.09 E-value=2.6 Score=41.90 Aligned_cols=53 Identities=15% Similarity=-0.110 Sum_probs=31.1
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~ 63 (329)
..+|+++|.||++... ..... . .+| .| +.|.++|....+ |+++++++..+.+.
T Consensus 173 ~~~gi~livD~t~~~~-~~~~p--l-~~g--~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~ 231 (390)
T PRK08133 173 HAAGALLVVDNCFCTP-ALQQP--L-KLG--ADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVF 231 (390)
T ss_pred HHcCCEEEEECCCccc-ccCCc--h-hhC--CcEEEeecceeecCCcceEeEEEEcCHHHHHHHH
Confidence 3579999999997421 11111 0 122 46 459998754466 56667777665443
No 269
>PRK05367 glycine dehydrogenase; Provisional
Probab=83.92 E-value=4.4 Score=45.35 Aligned_cols=62 Identities=8% Similarity=-0.091 Sum_probs=41.4
Q ss_pred HHHHHHHHHHCCceeecc-CCCCCEEEEeCccccCcCCHHHHHHHHhcc--ccchhhhhhhhhhhhcc
Q psy7882 150 MTHILDSCKEHGLLLGRG-GLSGNTLTALQPKLLNYWTDFVGTPCLDCE--SKGTFQSYAGSINKLTG 214 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~-G~~~nvIrl~PPL~It~~t~eeId~~l~~~--~~~~~~~~~~~~~~~~~ 214 (329)
...+.++|.+.|+..... -+..+.+++.|--.- +++|||+++++. .....+++....|....
T Consensus 824 ~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~---s~~elDr~~~al~~i~~e~~~~~~~~~~~~~ 888 (954)
T PRK05367 824 VDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESE---SKAELDRFCDAMIAIRAEIDEVEAGEWPAED 888 (954)
T ss_pred HHHHHHHHHHCCCeEeecCCccCCEEEEEeeecC---CHHHHHHHHHHHHHHHHHHHHhhcCCCCCCc
Confidence 356888899999987542 123678999986533 799999999985 23344554545554433
No 270
>PTZ00377 alanine aminotransferase; Provisional
Probab=82.57 E-value=38 Score=34.49 Aligned_cols=39 Identities=10% Similarity=-0.019 Sum_probs=26.0
Q ss_pred HHHHHHCCceeeccCCC-----CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLS-----GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~-----~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.++||.+.|+... .+.+|+. +.. +++++++.++..
T Consensus 426 ~~ll~~~gV~v~pG~~F~~~~~~~~~Rls--~~~---~~e~l~~~l~rl 469 (481)
T PTZ00377 426 LELLESTGIVVVPGSGFGQKPGTYHFRIT--ILP---PEEQIEEMVKKI 469 (481)
T ss_pred HHHHHHcCEEEeCCcccCCCCCCCEEEEE--ECC---CHHHHHHHHHHH
Confidence 45666789999875321 2468874 332 578899988874
No 271
>PRK08637 hypothetical protein; Provisional
Probab=82.18 E-value=31 Score=33.81 Aligned_cols=170 Identities=9% Similarity=-0.032 Sum_probs=79.6
Q ss_pred ccceEEehhHhhchhccchh----hhhcccCCcch--------HHHh-hcCCccccceeeec------hhHHHhhhhhhh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTY----LGFQCLQICRF--------VQKD-FKGSFWDKLIVHTS------TCTFENFIKIKY 67 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~----fA~e~~GV~PD--------i~Ka-LgGG~~PigAv~~~------~eI~d~~~~~~~ 67 (329)
||+++|.||+...|-..+.. ++. ..+..+. ++|. ...| +-+|.++.. +++.+.+.....
T Consensus 183 ~~~~iI~De~Y~~l~~~~~~~~~~~~~-~~~~~~~vi~i~~~s~SK~~~~pG-lRlG~~~~~~~~~~~~~l~~~~~~~~~ 260 (388)
T PRK08637 183 TKVVAVVDDAYFGLFYEDSYKESLFAA-LANLHSNILAVKLDGATKEEFVWG-FRVGFITFGTKAGSSQTVKEALEKKVK 260 (388)
T ss_pred CcEEEEecccchhcccCCccchhhHHH-hhcccccceEEEeccccccCCCcc-cceEEEEEccccCCcHHHHHHHHHHHH
Confidence 78999999999887433321 111 1111112 4586 4455 478887743 577766542000
Q ss_pred ccC-CCCccchhhhccHHHHHHHHhhHHhHHHHHHHHHHHHHHH---HHHHHHhCC---ceeeEE-eeceeeEEEeecCC
Q psy7882 68 QIL-KTPAHKLKISDTVRPHVQIKKSVLERFVHTYVVGNFLLTH---LSKLREEFA---IVGDVR-GKGLMIGVDLVQDK 139 (329)
Q Consensus 68 ~~~-~~~~hg~T~agnlA~aaala~~ile~le~v~~lG~~L~~g---L~eL~~~~p---~v~~VR-G~GLm~gIef~~d~ 139 (329)
... ....+.++++. .++.+++....+ ..+++++-..++++ +.++..+++ .+.-.. .-|+++.+.+..
T Consensus 261 ~~~~~~~~~~s~~~q-~a~~~~l~~~~~--~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~-- 335 (388)
T PRK08637 261 GLIRSNISNGPHPSQ-SAVLRALNSPEF--DKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKG-- 335 (388)
T ss_pred HHhhcccCCCCcHHH-HHHHHHhCCHHH--HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCCh--
Confidence 000 00112222211 222333333222 22333332223322 222223332 122122 235666666631
Q ss_pred CCCCCCChHHHHHHHHHHH-HCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 140 ETKVPLNSRHMTHILDSCK-EHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 140 ~~~~p~~~~~~~~~~~~l~-e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.-..++...|. ++||.+.+.+ .+.+|+. ++..+++++.+.++..
T Consensus 336 --------~~~~~l~~~l~~~~gv~~~~~~--~~~iRi~----~~~~~~~~i~~~~~~l 380 (388)
T PRK08637 336 --------VDAEELRVHLLEKYGIGTIALN--ETDLRIA----FSCVEEEDIPELFDSI 380 (388)
T ss_pred --------HHHHHHHHHHhhhcceEEEecc--CCceEEE----eecCCHHHHHHHHHHH
Confidence 11345777876 6799876532 4567764 2223578888888763
No 272
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=82.00 E-value=3.7 Score=40.90 Aligned_cols=53 Identities=8% Similarity=-0.147 Sum_probs=32.4
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~ 63 (329)
..+|+++|+||.+. .+-.+. ..+.-.| +.|.++|--.++ |++++++++.+.+.
T Consensus 171 ~~~gi~livD~a~a-~~~~~~-----~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~ 229 (391)
T TIGR01328 171 HSQGVKVIVDNTFA-TPMLTN-----PVALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIR 229 (391)
T ss_pred HHcCCEEEEECCCc-hhccCC-----chhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHH
Confidence 35799999999975 212221 1223356 459998622354 66777888776554
No 273
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=81.78 E-value=3.2 Score=41.25 Aligned_cols=52 Identities=12% Similarity=-0.208 Sum_probs=29.5
Q ss_pred ccccceEEehhHhh-chhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeee-chhHHHhhh
Q psy7882 5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHT-STCTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~-~~eI~d~~~ 63 (329)
..+|+++|+||.+. |+.-.+ . .+| .| +.|.++|.--.+ |++++ ++++.+.+.
T Consensus 164 ~~~gi~livD~t~a~~~~~~~----l-~~G--aDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~ 223 (385)
T PRK08574 164 KELGAILVVDNTFATPLLYRP----L-RHG--ADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELW 223 (385)
T ss_pred HHcCCEEEEECCCCccccCCh----h-hhC--CcEEEeeCceeecCCCCceeEEEEECcHHHHHHHH
Confidence 35799999999984 332111 1 123 36 459998622234 43444 566666543
No 274
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=81.62 E-value=32 Score=34.41 Aligned_cols=44 Identities=18% Similarity=0.024 Sum_probs=30.6
Q ss_pred HHHHHHHHHCCceeec----cCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGR----GGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~----~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+.+.|.++|++... ..+ ..+.+|+.+.... |++|++++++++
T Consensus 394 ~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~---t~e~i~~l~~~L 442 (447)
T PRK00451 394 EEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKR---TKEDIDALVAAL 442 (447)
T ss_pred HHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCC---CHHHHHHHHHHH
Confidence 4688888999887432 110 1357888876554 689999999985
No 275
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=81.61 E-value=3.3 Score=41.18 Aligned_cols=53 Identities=11% Similarity=-0.128 Sum_probs=31.8
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeeechhHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHTSTCTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~~~eI~d~~~ 63 (329)
..+|+++|+||++. .|-.+.. ...-.| ..|.++|-- .=.|++.++++.++.+.
T Consensus 162 ~~~g~~livD~t~a-~g~~~~p-----l~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~ 220 (377)
T TIGR01324 162 RNPGIVIMIDNTWA-AGLLFKP-----LEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLR 220 (377)
T ss_pred HHcCCEEEEECCCc-cccccCc-----cccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHH
Confidence 35799999999986 2322221 122357 349997631 12467778877666543
No 276
>KOG2862|consensus
Probab=81.51 E-value=19 Score=35.59 Aligned_cols=180 Identities=14% Similarity=0.036 Sum_probs=93.2
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhcc----------
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQI---------- 69 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~---------- 69 (329)
+..+|+++|++|-|.+ .| |.-|.++.|||.=- -.|+|++= .-++.+..++..++.+.......
T Consensus 168 lc~k~~~lllVD~VaS-lg--gt~F~mDewgVDvaytgSQKaL~aP-~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~ 243 (385)
T KOG2862|consen 168 LCHKHEALLLVDTVAS-LG--GTEFEMDEWGVDVAYTGSQKALGAP-AGLSIISFSDKALEAIRDRKTKPVSFYFDILRL 243 (385)
T ss_pred HhhcCCeEEEEechhh-cC--CccceehhhcccEEEecchhhcCCC-CCcceeecCHHHHHHHhhccCCceEEEEeHHhh
Confidence 5668999999999987 43 55789999998543 23999763 13466777777776665311100
Q ss_pred CCCCcc-------chhhhcc--HHHHHHH---HhhHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEee
Q psy7882 70 LKTPAH-------KLKISDT--VRPHVQI---KKSVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLV 136 (329)
Q Consensus 70 ~~~~~h-------g~T~agn--lA~aaal---a~~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~ 136 (329)
+..+.- .+|-.-. -+..+|+ ..+=+++ +++=++++++|+..|+.+--+.=.+.+--..-..-++-.
T Consensus 244 ~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~v- 322 (385)
T KOG2862|consen 244 GNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKV- 322 (385)
T ss_pred cchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeec-
Confidence 000000 0111111 1122222 2233333 667788888888888875110000011001111122221
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 137 QDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|+.-+ ...++..+..++.+....|. .+.++||- =+-+. .+.+-|+..+++.
T Consensus 323 -------p~gvD-w~dVv~~~~~~~~vei~gglg~~~gKv~RIG-l~gcn-a~~e~i~~v~~ll 376 (385)
T KOG2862|consen 323 -------PYGVD-WKDVVAYAMSHYVVEIGGGLGPTVGKVFRIG-LLGCN-ANVEYIDNVVELL 376 (385)
T ss_pred -------CCCCC-HHHHHHHHHHhcCEEeccccCCCcccEEEEE-Eeecc-CCcHHHHHHHHHH
Confidence 11101 34577778877555444332 46788887 12222 2567888888764
No 277
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=80.57 E-value=6.6 Score=38.55 Aligned_cols=113 Identities=16% Similarity=0.016 Sum_probs=54.4
Q ss_pred ccccceEEehhHh-hchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeeec-hhHHHhhhhhhhccCCCCccc
Q psy7882 5 YYRDCGVVVSAVD-FGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHTS-TCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 5 ~~~giLLI~DEVq-TGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg 76 (329)
..+|+++|.||++ +++. +. -...-.| +.|.++|.- +-.|+++++ +++.+.+.. .. ..
T Consensus 163 ~~~g~~lIvD~t~~~~~~--~~-----p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~--~~------~~ 227 (366)
T PRK08247 163 KKHGLLLIVDNTFYTPVL--QR-----PLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAY--YQ------NA 227 (366)
T ss_pred HHcCCEEEEECCCccccc--cC-----chhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHH--HH------Hh
Confidence 4579999999997 2221 11 1111245 459998631 123556665 566665432 00 00
Q ss_pred hhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE--eeceeeEEEee
Q psy7882 77 LKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR--GKGLMIGVDLV 136 (329)
Q Consensus 77 ~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR--G~GLm~gIef~ 136 (329)
.+...+ ..+..++.. +.+.. +++.++..+.+.+. .+.||.+..|. |.|.|+++++.
T Consensus 228 ~g~~~s~~~a~l~~~~l~tl~~r~~~~~~~a~~l~~~----L~~~p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 228 AGAVLSPFDSWLLIRGMKTLALRMRQHEENAKAIAAF----LNEQPGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred cCCCCChHHHHHHHhccCcHHHHHHHHHHHHHHHHHH----HHhCCCeeEEecCCcCcEEEEEEC
Confidence 011111 222222222 22221 33334444444443 44567665543 45889999874
No 278
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=79.15 E-value=38 Score=33.08 Aligned_cols=63 Identities=8% Similarity=-0.020 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCcee--eEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeec
Q psy7882 97 FVHTYVVGNFLLTHLSKLREEFAIVG--DVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGR 166 (329)
Q Consensus 97 le~v~~lG~~L~~gL~eL~~~~p~v~--~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~ 166 (329)
.++-+++.+++.+.|..+-.-.+... .....-.+..+.+..+.. .....+.+.|.++||.++.
T Consensus 261 ~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------~~r~~l~~~L~~~gI~~~~ 325 (380)
T TIGR03588 261 VAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFG-------CTRKEVFEALRAAGIGVQV 325 (380)
T ss_pred HHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCC-------CCHHHHHHHHHHCCCCccc
Confidence 56677778888887766421011100 111111233444432110 1245688888899987753
No 279
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=78.99 E-value=54 Score=32.30 Aligned_cols=172 Identities=5% Similarity=-0.026 Sum_probs=81.7
Q ss_pred ccccceEEehhHhhchhccchh-hhhcccCCcch--------HHHh-hcCCccccceeeech--hH-----HHhhhhhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF--------VQKD-FKGSFWDKLIVHTST--CT-----FENFIKIKY 67 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD--------i~Ka-LgGG~~PigAv~~~~--eI-----~d~~~~~~~ 67 (329)
..+|+.+|.||+...|-..|.- ..... +.++ ++|. ...| +=+|.+++.. ++ .+.+.. .
T Consensus 199 ~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~~vi~~~S~SK~~~~pG-lRiG~~v~~~~~~~~~~~~~~~~~~--~ 273 (403)
T TIGR01265 199 RKLGIPIIADEIYGHMVFGDAPFIPMAS--FASIVPVLSLGGISKRWVVPG-WRLGWIIIHDPHGIFRDTVLQGLKN--L 273 (403)
T ss_pred HHCCCEEEEEccccccccCCCCccchhh--hccCCcEEEEeecccccCCCc-ceEEEEEEeCchhhhHHHHHHHHHH--H
Confidence 3579999999999888544421 11111 2222 5798 4555 4788887642 32 222221 0
Q ss_pred ccCCCCccchhhhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCCC
Q psy7882 68 QILKTPAHKLKISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKETK 142 (329)
Q Consensus 68 ~~~~~~~hg~T~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~~ 142 (329)
. ....+.++++. .+++++++. ..+++ .+.+++.-+.+.+.|+ .++.+..+. .-|+++-+++......
T Consensus 274 ~--~~~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~~p~~g~f~~~~~~~~~~~- 345 (403)
T TIGR01265 274 L--QRILGPATIVQ-GALPDILENTPQEFFDGKISVLKSNAELCYEELK----DIPGLVCPKPEGAMYLMVKLELELFP- 345 (403)
T ss_pred h--hhhcCCChHHH-HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh----cCCCceecCCCceeEEEEeccccccC-
Confidence 0 00111222221 223333432 23322 2233333333444333 343332222 2366677776432100
Q ss_pred CCCChHHHHHHHHHH-HHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 143 VPLNSRHMTHILDSC-KEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 143 ~p~~~~~~~~~~~~l-~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+ .-...+...+ .++||++.++.. ..+.+|+. +.. .++.+++.++..
T Consensus 346 -~~--~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis--~~~---~~~~l~~~l~~l 395 (403)
T TIGR01265 346 -EI--KDDVDFCEKLVREESVICLPGSAFGLPNWVRIT--ITV---PESMLEEACSRI 395 (403)
T ss_pred -CC--CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEE--ecC---CHHHHHHHHHHH
Confidence 00 0123466665 578999987532 24677775 222 367788877764
No 280
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=78.70 E-value=4.9 Score=39.63 Aligned_cols=149 Identities=11% Similarity=0.055 Sum_probs=72.4
Q ss_pred ccccceEEehhHhh-chhccchhhhhcccCCcch-H----HHhhcCCccccceeeec-hhHHHhhhh-hhhccC-C---C
Q psy7882 5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF-V----QKDFKGSFWDKLIVHTS-TCTFENFIK-IKYQIL-K---T 72 (329)
Q Consensus 5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD-i----~KaLgGG~~PigAv~~~-~eI~d~~~~-~~~~~~-~---~ 72 (329)
.++|+++|.|++|+ |.-..|.. ...+|+ | + .|.+++| .-|++++. +++++.+.. ...+.. . .
T Consensus 145 ~~~gi~vi~D~a~a~g~~~~~~~--~g~~g~--~~~Sf~~~K~l~~g--~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~ 218 (379)
T PRK11658 145 ERYGIPVIEDAAHAVGTYYKGRH--IGARGT--AIFSFHAIKNITCA--EGGLVVTDDDELADRLRSLKFHGLGVDAFDR 218 (379)
T ss_pred HHcCCeEEEECCCccCCeECCee--cCCCCC--EEEeCCCCCcCccc--CceEEEECCHHHHHHHHHHHHcCCCcchhhh
Confidence 46799999999998 54333321 122343 4 2 2888876 45666664 677665432 001100 0 0
Q ss_pred Cc-----------cchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHh-CCceee-EEeeceeeEEEee
Q psy7882 73 PA-----------HKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREE-FAIVGD-VRGKGLMIGVDLV 136 (329)
Q Consensus 73 ~~-----------hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~-~p~v~~-VRG~GLm~gIef~ 136 (329)
.. -|..+.-+ +..+.++.. +-+++ .++-+++.+++.+.|+++--. .+.... .+..-.+..+.+.
T Consensus 219 ~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (379)
T PRK11658 219 QTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVD 298 (379)
T ss_pred hcccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEEC
Confidence 00 01122222 344444444 44444 667778888888877654100 001111 0111123344442
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHCCceee
Q psy7882 137 QDKETKVPLNSRHMTHILDSCKEHGLLLG 165 (329)
Q Consensus 137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~ 165 (329)
.+.. . .....+.+.|.++||-++
T Consensus 299 ~~~~---~---~~r~~~~~~L~~~gI~~~ 321 (379)
T PRK11658 299 EERC---G---ISRDALMEALKERGIGTG 321 (379)
T ss_pred Cccc---c---CCHHHHHHHHHHCCCCCc
Confidence 2110 0 124568888889998654
No 281
>PLN02509 cystathionine beta-lyase
Probab=77.59 E-value=6.5 Score=40.40 Aligned_cols=107 Identities=11% Similarity=-0.061 Sum_probs=50.0
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeech-hHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTST-CTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~-eI~d~~~~~~~~~~~~~~hg~ 77 (329)
..||+++|+||.+. .+-.+. ..+.-.| ..|.|+|.--.+ |++.++. .+.+.+.. .. ...+.
T Consensus 244 k~~g~~lIVD~A~a-~~~~~~-----pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~--~~----~~~g~ 311 (464)
T PLN02509 244 HAQGALVLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYF--LQ----NSEGS 311 (464)
T ss_pred HHcCCEEEEECCcc-ccccCC-----hhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHH--HH----HhcCC
Confidence 46799999999974 222222 2233457 349998722234 4454443 34333221 00 01111
Q ss_pred hhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec
Q psy7882 78 KISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG 128 (329)
Q Consensus 78 T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G 128 (329)
.++. ..|..++.. +.++. +++..+...++.+.|+ .||.|..|.--|
T Consensus 312 ~l~p-~~A~l~lr~L~tL~~R~~r~~~nA~~la~~L~----~~p~V~~V~yPg 359 (464)
T PLN02509 312 GLAP-FDCWLCLRGIKTMALRIEKQQENARKIAMYLS----SHPRVKKVYYAG 359 (464)
T ss_pred CcCH-HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh----cCCCccEEECCC
Confidence 1211 233333333 33322 4555555555555553 566665554433
No 282
>PRK07503 methionine gamma-lyase; Provisional
Probab=77.49 E-value=6.5 Score=39.32 Aligned_cols=53 Identities=13% Similarity=-0.063 Sum_probs=32.9
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcC-CccccceeeechhHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKG-SFWDKLIVHTSTCTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgG-G~~PigAv~~~~eI~d~~~ 63 (329)
..+|+++|.|+.+... ..+. ..+.-.| +.|.++| |-.=.|++++++++++.+.
T Consensus 177 ~~~gi~lIvD~a~a~~-~~~~-----~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~ 235 (403)
T PRK07503 177 HGAGAKVVVDNTYCTP-YLQR-----PLELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIR 235 (403)
T ss_pred HHcCCEEEEECCCccc-ccCC-----chhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHH
Confidence 3579999999998632 1221 1233456 3599987 3212467777888776653
No 283
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=76.87 E-value=21 Score=35.28 Aligned_cols=147 Identities=10% Similarity=-0.009 Sum_probs=73.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HH----HhhcCCccccceeeec-hhHHHhhhh-hhhccCC--CC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQ----KDFKGSFWDKLIVHTS-TCTFENFIK-IKYQILK--TP 73 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~----KaLgGG~~PigAv~~~-~eI~d~~~~-~~~~~~~--~~ 73 (329)
..||+++|.|++|+ +|.+ +.-...|.--| ++ |.++.|. ..|++++. +++++.+.. ...+... .+
T Consensus 143 ~~~~i~vIeDaa~~-~g~~---~~~~~~g~~~~~~~fSf~~~K~l~~g~-~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~ 217 (376)
T TIGR02379 143 NKHQLFVIEDAAQG-VMST---YKGRALGSIGHLGTFSFHETKNYTSGG-EGGALLINDQAFIERAEIIREKGTNRSQFF 217 (376)
T ss_pred HHCCCEEEEECccc-cCCc---cCCcccCCCCCEEEEeCCCCCcCcccC-CceEEEECCHHHHHHHHHHHHhCCCCcccc
Confidence 35799999999987 3321 11112222223 33 8888773 56777665 677776553 1111100 00
Q ss_pred ----------ccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHH----hCCc-eeeEE-eeceeeEEE
Q psy7882 74 ----------AHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLRE----EFAI-VGDVR-GKGLMIGVD 134 (329)
Q Consensus 74 ----------~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~----~~p~-v~~VR-G~GLm~gIe 134 (329)
..|..|-.+ +.++.+++. +.+++ .++-++..++..+.|.++.. ..+. ..... ... ++.+.
T Consensus 218 ~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~i~ 296 (376)
T TIGR02379 218 RGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAH-MFYIK 296 (376)
T ss_pred ccCCCcceeeeecccCCccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeE-EEEEE
Confidence 012233333 444444444 44544 55566666667777765421 1111 11111 112 23444
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHCCceeec
Q psy7882 135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGR 166 (329)
Q Consensus 135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~ 166 (329)
+... .-..++.+.|.++||-+++
T Consensus 297 ~~~~---------~~r~~l~~~L~~~gI~~~~ 319 (376)
T TIGR02379 297 LKDE---------DDRNELIKYLKEQEIMAVF 319 (376)
T ss_pred ECCc---------CCHHHHHHHHHHCCCCccc
Confidence 4221 0145688899999997663
No 284
>PLN02397 aspartate transaminase
Probab=76.85 E-value=19 Score=36.03 Aligned_cols=55 Identities=5% Similarity=-0.168 Sum_probs=31.7
Q ss_pred ccccceEEehhHhhchhccch---hhhhcccCCcch-------HHHhhc-CCccccceee---echhHHH
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT---YLGFQCLQICRF-------VQKDFK-GSFWDKLIVH---TSTCTFE 60 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~---~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~---~~~eI~d 60 (329)
..||+++|.||+..+|.--|. ......+--.+| ++|.++ .|. =+|.++ ..+++.+
T Consensus 224 ~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~-RvG~~v~~~~~~~~~~ 292 (423)
T PLN02397 224 KSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGE-RVGALSVVCKSADVAV 292 (423)
T ss_pred HhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccc-cceEEEEEeCCHHHHH
Confidence 357999999999998843220 111111100112 679998 674 788763 3555544
No 285
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=75.69 E-value=17 Score=35.99 Aligned_cols=53 Identities=11% Similarity=-0.106 Sum_probs=28.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccc-cceeeech-hHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWD-KLIVHTST-CTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~P-igAv~~~~-eI~d~~~ 63 (329)
..+|+++|+|+.+.. +-... ....-.| ..|.++|..-. .|++++++ ++.+.+.
T Consensus 158 ~~~g~~vivD~a~~~-~~~~~-----~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~ 217 (378)
T TIGR01329 158 HAQNALVVVDNTMMS-PLLCN-----PLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVY 217 (378)
T ss_pred HHcCCEEEEECCCcc-cccCC-----hhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHH
Confidence 467999999998731 11111 1122357 34999874212 46665644 4444443
No 286
>PRK06234 methionine gamma-lyase; Provisional
Probab=75.17 E-value=9.3 Score=38.10 Aligned_cols=51 Identities=16% Similarity=-0.045 Sum_probs=31.8
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFI 63 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~ 63 (329)
+|+++|+||++... -.+. ..+...| +.|.++|....+ |++++++++.+.+.
T Consensus 180 ~~i~livDea~~~~-~~~~-----~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~ 236 (400)
T PRK06234 180 KECLVFVDNTFCTP-YIQR-----PLQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVK 236 (400)
T ss_pred CCCEEEEECCCCch-hcCC-----chhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHH
Confidence 38999999997532 1111 1222356 459998632344 77888888776654
No 287
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=73.87 E-value=20 Score=35.10 Aligned_cols=16 Identities=19% Similarity=0.339 Sum_probs=13.1
Q ss_pred HHHHHHHHHHCCceee
Q psy7882 150 MTHILDSCKEHGLLLG 165 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~ 165 (329)
...+.+.|.++||.++
T Consensus 302 r~~l~~~L~~~gI~~~ 317 (375)
T PRK11706 302 RSALINFLKEAGIMAV 317 (375)
T ss_pred HHHHHHHHHHCCCCcc
Confidence 4568899999999865
No 288
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=73.77 E-value=22 Score=35.71 Aligned_cols=46 Identities=9% Similarity=-0.205 Sum_probs=29.8
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeech
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTST 56 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~ 56 (329)
..+|+++|+||++. . | +.+......+| +.|.++|....+|.++++.
T Consensus 169 ~~~~i~livD~t~~-~---~--~~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 169 HAHGVPLIVDNTFA-T---P--YLCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred HHcCCEEEEECCCc-h---h--hcCCchhcCCeEEEECccccccCCccceEEEEEec
Confidence 35799999999975 2 2 12222333468 4599998335888777754
No 289
>PLN02672 methionine S-methyltransferase
Probab=72.76 E-value=66 Score=36.79 Aligned_cols=43 Identities=14% Similarity=0.023 Sum_probs=29.2
Q ss_pred HHHHHHHHHHC-CceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEH-GLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~-GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.++++ ||.+.+... ..+.+||.= .. +++++++.++..
T Consensus 1029 s~efae~LLee~GVaV~PGs~FG~~g~~RIsf--a~---~~e~LeeALerL 1074 (1082)
T PLN02672 1029 SSNIREAILKSTGLCINSSSWTGIPGYCRFSF--AL---EDSEFDRALKAI 1074 (1082)
T ss_pred HHHHHHHHHHcCCEEEecCcccCCCCeEEEEe--cC---CHHHHHHHHHHH
Confidence 35678888765 999988521 245677752 22 578999999874
No 290
>KOG0634|consensus
Probab=72.73 E-value=1e+02 Score=31.73 Aligned_cols=187 Identities=11% Similarity=-0.025 Sum_probs=91.0
Q ss_pred CccccccceEEehhHhhchhcc--------------chhhh---------hcccC--Ccch-HHHhhcCCccccceeeec
Q psy7882 2 DTTYYRDCGVVVSAVDFGSGDN--------------GTYLG---------FQCLQ--ICRF-VQKDFKGSFWDKLIVHTS 55 (329)
Q Consensus 2 ~~~~~~giLLI~DEVqTGfGRT--------------G~~fA---------~e~~G--V~PD-i~KaLgGG~~PigAv~~~ 55 (329)
++-.+||+|+|-||+.-=+-.. +..|- .+-.| |.=| ++|-|+-|. =+|-..+.
T Consensus 231 ~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGl-RlG~it~~ 309 (472)
T KOG0634|consen 231 QLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGL-RLGWITGN 309 (472)
T ss_pred HHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcc-eeEEeecC
Confidence 3557899999999996533211 00111 11111 2233 679999995 88888888
Q ss_pred hhHHHhhhhhhhccCCCCccchhhhcc--HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhC-Cc-ee--eEEeec
Q psy7882 56 TCTFENFIKIKYQILKTPAHKLKISDT--VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEF-AI-VG--DVRGKG 128 (329)
Q Consensus 56 ~eI~d~~~~~~~~~~~~~~hg~T~agn--lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~-p~-v~--~VRG~G 128 (329)
.-..+.... .. ..+..++++++.. -++...... ..++.+.+++..=..=+..+-..+.+| |. +. .+---|
T Consensus 310 ~~~l~ril~--~a-e~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aG 386 (472)
T KOG0634|consen 310 SLFLKRILD--LA-EVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAG 386 (472)
T ss_pred HHHHHHHhh--hc-ceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcc
Confidence 766555432 11 1123445666555 233333222 222222222211111111122222222 32 22 333469
Q ss_pred eeeEEEeecCCC-CCCCCChHHHHHHHHHHHHCCceeeccC-------CC-CC-EEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 129 LMIGVDLVQDKE-TKVPLNSRHMTHILDSCKEHGLLLGRGG-------LS-GN-TLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 129 Lm~gIef~~d~~-~~~p~~~~~~~~~~~~l~e~GVLl~~~G-------~~-~n-vIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+++-|++.-... ++... ++....+...+.++||++.+.. .. .. .+|+ .++..+.+++++.++.+
T Consensus 387 mFiwv~i~~~~~~~~~~i-~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRl----s~a~a~~e~l~~g~~rf 460 (472)
T KOG0634|consen 387 MFIWVEIPYINFDTKKSI-NQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRL----SIAFAEPEKLDEGIERF 460 (472)
T ss_pred eEEEEEecccccccccch-HHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEE----EeecCCHHHHHHHHHHH
Confidence 999999851100 00011 2344556778889999986521 01 12 3333 34444577888887753
No 291
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=70.04 E-value=55 Score=37.08 Aligned_cols=59 Identities=7% Similarity=-0.084 Sum_probs=38.5
Q ss_pred HHHHHHHHHCCceeeccC-CCCCEEEEeCccccCcCCHHHHHHHHhcc--ccchhhhhhhhhhhh
Q psy7882 151 THILDSCKEHGLLLGRGG-LSGNTLTALQPKLLNYWTDFVGTPCLDCE--SKGTFQSYAGSINKL 212 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G-~~~nvIrl~PPL~It~~t~eeId~~l~~~--~~~~~~~~~~~~~~~ 212 (329)
..+.+.|.+.|+...... +..+.++++|--.- +++|||+++++. ......++....|..
T Consensus 857 ~di~krL~d~Gihapt~~~pv~~~lmiepTE~~---skeelDrf~~al~~i~~e~~~~~~g~~~~ 918 (993)
T PLN02414 857 EDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESE---SKAELDRFCDALISIREEIADIENGKADR 918 (993)
T ss_pred HHHHHHHHHcCcEEeeeccccCCEEEEEeeeeC---CHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 557888889898764321 24678999986544 689999999985 223444444444443
No 292
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=69.49 E-value=39 Score=33.18 Aligned_cols=48 Identities=15% Similarity=0.020 Sum_probs=28.3
Q ss_pred ccccceEEehhHhhchhcc-ch-hhhhccc-CCcch------HHHhhcC-Cccccceee
Q psy7882 5 YYRDCGVVVSAVDFGSGDN-GT-YLGFQCL-QICRF------VQKDFKG-SFWDKLIVH 53 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRT-G~-~fA~e~~-GV~PD------i~KaLgG-G~~PigAv~ 53 (329)
..||+++|.||+...|.-. +. ..+...+ +..+. ++|.++- |+ =+|.++
T Consensus 202 ~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~Gl-RiG~~~ 259 (396)
T PRK09257 202 KERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGE-RVGALS 259 (396)
T ss_pred HhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccc-cceeEE
Confidence 4579999999999887532 11 1111111 11122 6799985 74 788765
No 293
>PLN02231 alanine transaminase
Probab=69.02 E-value=75 Score=33.21 Aligned_cols=59 Identities=12% Similarity=0.006 Sum_probs=34.3
Q ss_pred ccccceEEehhHhhchhcc-chhh-hhcc----cCCcc-h--------HHHhhcC--Cccccceeee---chhHHHhhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDN-GTYL-GFQC----LQICR-F--------VQKDFKG--SFWDKLIVHT---STCTFENFIK 64 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRT-G~~f-A~e~----~GV~P-D--------i~KaLgG--G~~PigAv~~---~~eI~d~~~~ 64 (329)
..+|+++|.|||..-+--. |.-+ .+.. .|... | ++|++.| |+ -+|.+.+ .+++.+.+..
T Consensus 301 ~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGl-RiGy~~~~~~~~~l~~~l~k 379 (534)
T PLN02231 301 KQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGK-RGGYMEVTGFTSDVREQIYK 379 (534)
T ss_pred HHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCcc-ceEEEEEecCCHHHHHHHHH
Confidence 4579999999999876332 2211 1111 11111 1 5798754 63 6777664 5778777653
No 294
>PRK05367 glycine dehydrogenase; Provisional
Probab=66.85 E-value=91 Score=35.20 Aligned_cols=43 Identities=14% Similarity=0.009 Sum_probs=35.3
Q ss_pred HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.+.++||.+... .++.++++|-.+. |++|||.+++++
T Consensus 394 ~~~i~~~l~~~gi~~~~~--~~~~l~is~~e~~---t~~did~l~~~l 436 (954)
T PRK05367 394 AAAVLARALAAGINLRRV--DDDHVGISLDETT---TREDLAALLAVF 436 (954)
T ss_pred HHHHHHHHHHCCceeccc--cCCEEEEEecccC---CHHHHHHHHHHH
Confidence 456899999999998653 2578999998777 589999999986
No 295
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=65.85 E-value=16 Score=36.95 Aligned_cols=45 Identities=7% Similarity=-0.199 Sum_probs=27.9
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeec
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTS 55 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~ 55 (329)
..+|+++|+||++.. +.. +.....-.| +.|.++|....+|++++.
T Consensus 170 ~~~~i~vVvD~a~a~-~~~-----~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 170 HRHGVPLIVDNTVAT-PVL-----CRPFEHGADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred HHcCCEEEEECCCcc-ccc-----CChhhcCCCEEEECchhcccccccceeEEEEe
Confidence 357999999999862 222 122233467 459998754567655553
No 296
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=65.04 E-value=7.2 Score=36.88 Aligned_cols=15 Identities=20% Similarity=0.051 Sum_probs=12.7
Q ss_pred ccccceEEehhHhhc
Q psy7882 5 YYRDCGVVVSAVDFG 19 (329)
Q Consensus 5 ~~~giLLI~DEVqTG 19 (329)
..+|+++|+||++..
T Consensus 180 ~~~g~~livDeA~~~ 194 (294)
T cd00615 180 HHRGLPVLVDEAHGA 194 (294)
T ss_pred HhcCCeEEEECcchh
Confidence 467999999999875
No 297
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=64.97 E-value=41 Score=34.12 Aligned_cols=76 Identities=8% Similarity=0.046 Sum_probs=40.1
Q ss_pred HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHH--hCCc-eeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHH
Q psy7882 83 VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLRE--EFAI-VGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSC 157 (329)
Q Consensus 83 lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~--~~p~-v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l 157 (329)
+.++.++.. +.+++ +++-+++.+++.+.|..+.. ..|. ..+....-.++.|.+.... + .....+++.|
T Consensus 295 l~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~---~~Rd~l~~~L 367 (438)
T PRK15407 295 MQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDA----G---FTRVELVKYL 367 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcC----C---CCHHHHHHHH
Confidence 555555555 55555 66677777777777765421 1121 1111222234445543211 0 1145688899
Q ss_pred HHCCceee
Q psy7882 158 KEHGLLLG 165 (329)
Q Consensus 158 ~e~GVLl~ 165 (329)
.++||-++
T Consensus 368 ~~~GI~~~ 375 (438)
T PRK15407 368 EENKIGTR 375 (438)
T ss_pred HHCCCCcc
Confidence 99998654
No 298
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=64.66 E-value=44 Score=33.82 Aligned_cols=71 Identities=11% Similarity=-0.038 Sum_probs=41.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhc---cCCCCccc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQ---ILKTPAHK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~---~~~~~~hg 76 (329)
.+||++||+|-.++.- + -++-+.--.| ..|-|+|=-..+|.+++-.--+|.-....++ ...+..||
T Consensus 174 h~~gvpliVDNT~atp-----y-l~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhG 247 (426)
T COG2873 174 HRHGVPLIVDNTFATP-----Y-LCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHG 247 (426)
T ss_pred HHcCCcEEEecCCCcc-----e-ecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccc
Confidence 5789999999987642 1 1222222235 4588888666788777666555533111111 12235788
Q ss_pred hhhhc
Q psy7882 77 LKISD 81 (329)
Q Consensus 77 ~T~ag 81 (329)
..|..
T Consensus 248 l~~~~ 252 (426)
T COG2873 248 LVYTE 252 (426)
T ss_pred eehhh
Confidence 77776
No 299
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=63.21 E-value=39 Score=33.46 Aligned_cols=52 Identities=12% Similarity=-0.146 Sum_probs=29.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeec-hhHHHhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTS-TCTFENF 62 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~-~eI~d~~ 62 (329)
..+|+++|.|+++... -.+ ...+.-.| ..|.++|.--.+ |+++++ +++++.+
T Consensus 161 ~~~gi~vivD~t~a~~-~~~-----~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~ 219 (380)
T PRK06176 161 KDHGLLTIVDNTFATP-YYQ-----NPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEI 219 (380)
T ss_pred HHcCCEEEEECCcccc-ccC-----CccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHH
Confidence 4579999999998632 111 12233457 249998632123 445554 4555544
No 300
>KOG0256|consensus
Probab=62.98 E-value=68 Score=32.89 Aligned_cols=160 Identities=11% Similarity=0.081 Sum_probs=82.5
Q ss_pred cccccceEEehhHhhchhccch-hhhh-cc--c-CCcch-------HHHhhcCCccccceeeechh-HHHhhhhhhhccC
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGT-YLGF-QC--L-QICRF-------VQKDFKGSFWDKLIVHTSTC-TFENFIKIKYQIL 70 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~-~fA~-e~--~-GV~PD-------i~KaLgGG~~PigAv~~~~e-I~d~~~~~~~~~~ 70 (329)
...+.+-+|.|||..|-=.... +-.. +. . ...|| ++|-+|=-.+-+|++....+ +..+..+ +
T Consensus 255 a~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~k----m- 329 (471)
T KOG0256|consen 255 ASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATK----M- 329 (471)
T ss_pred HhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHH----H-
Confidence 3457899999999987422111 1111 11 1 12566 46776522235677776543 4433322 1
Q ss_pred CCCccchhhhccHHHHHHHH-h-hHHhH-----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCC
Q psy7882 71 KTPAHKLKISDTVRPHVQIK-K-SVLER-----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKV 143 (329)
Q Consensus 71 ~~~~hg~T~agnlA~aaala-~-~ile~-----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~ 143 (329)
..+.--+.+...+ ++.+- . ++.+. -.+++..-.++.++|+++ ++..--++-|+++-+++..--.. .
T Consensus 330 ssf~~vSs~tQ~~--la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l----gI~cl~s~AGlF~wvDlr~lL~s-~ 402 (471)
T KOG0256|consen 330 SSFGLVSSQTQYL--LASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL----GIPCLKSNAGLFCWVDLRKLLTS-L 402 (471)
T ss_pred hhccCCcHHHHHH--HHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc----CCceeecCCeeEEEEEhHHhcCc-C
Confidence 1121113333331 12222 2 33332 345566666777777765 44445678999999999642111 1
Q ss_pred CCChHHHHHHHHHHHHC-CceeeccCC----CCCEEEEe
Q psy7882 144 PLNSRHMTHILDSCKEH-GLLLGRGGL----SGNTLTAL 177 (329)
Q Consensus 144 p~~~~~~~~~~~~l~e~-GVLl~~~G~----~~nvIrl~ 177 (329)
.|..+ ..++..+.++ +|.+.|... .+..+|++
T Consensus 403 tfe~E--l~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvc 439 (471)
T KOG0256|consen 403 TFEGE--LELWERILDNVKLNLSPGSSCHCHEPGWFRVC 439 (471)
T ss_pred ChHHH--HHHHHHHHHhhccccCCCCcceecCCCeEEEE
Confidence 12222 3366666666 888887432 35566664
No 301
>PRK09028 cystathionine beta-lyase; Provisional
Probab=62.69 E-value=19 Score=36.15 Aligned_cols=53 Identities=8% Similarity=-0.102 Sum_probs=31.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCccc-cceeeechhHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFWD-KLIVHTSTCTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~P-igAv~~~~eI~d~~~ 63 (329)
..||+++|+||++.. +. .+.-...-.|+ -|-|+|.--- .|+++.+++.++.+.
T Consensus 173 ~~~g~~lvvD~t~a~----p~--~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~ 231 (394)
T PRK09028 173 HEHDIVVMLDNTWAS----PI--NSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLR 231 (394)
T ss_pred HHcCCEEEEECCccc----cc--cCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHH
Confidence 357999999999963 21 12222333573 3999875312 255666666655443
No 302
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=62.55 E-value=65 Score=33.06 Aligned_cols=123 Identities=11% Similarity=0.059 Sum_probs=64.9
Q ss_pred ccccceEEehhHhhchhcc-chhhhhcccCC-cch-----HHHhhcCCccccceeee-chhHHHhhhhhhhccCCCCccc
Q psy7882 5 YYRDCGVVVSAVDFGSGDN-GTYLGFQCLQI-CRF-----VQKDFKGSFWDKLIVHT-STCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRT-G~~fA~e~~GV-~PD-----i~KaLgGG~~PigAv~~-~~eI~d~~~~~~~~~~~~~~hg 76 (329)
..||+.+|.|+.+...... ..+. .....+ ..| ..|.+.... .-|++++ .+++.+.+.. .+. ....
T Consensus 232 ~k~gI~lIvDaAyg~~~~~~~~~~-~~g~~~Grad~vv~s~hK~l~~pg-~Gg~I~~~d~el~~~i~~-~y~----g~~~ 304 (444)
T TIGR03531 232 ANYDIPHIVNNAYGLQSNKYMELI-NKAIKVGRVDAVVSSTDKNFMVPV-GGAIIYSFDENFIQEISK-SYP----GRAS 304 (444)
T ss_pred HHcCCEEEEECcCcCcChhhhhhh-hccccccCCCeEEEeCccCCCCCC-CEEEEEECCHHHHHHHHH-hcc----CCCC
Confidence 4689999999998642111 0000 000111 134 348765321 2345556 4566665543 111 0001
Q ss_pred hhhhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCc-eeeEEeeceeeEEEee
Q psy7882 77 LKISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAI-VGDVRGKGLMIGVDLV 136 (329)
Q Consensus 77 ~T~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~-v~~VRG~GLm~gIef~ 136 (329)
.+. .+.+.+.+.. +-+++ +++-.++.+++.+.|+++.++++. +.++..--.-+++.+.
T Consensus 305 ~s~--~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~ 367 (444)
T TIGR03531 305 ASP--SLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLS 367 (444)
T ss_pred ChH--HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecc
Confidence 111 1222222222 44444 777888999999999999988874 5566555555666664
No 303
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=62.52 E-value=59 Score=32.35 Aligned_cols=128 Identities=11% Similarity=0.016 Sum_probs=64.3
Q ss_pred cccc-eeeechhHHHhhhhhhhccCCCCccchhhhcc--HHH--HHHHHhhHHhH-HHHHHHHHHHHHHHHHHHHHhCCc
Q psy7882 47 WDKL-IVHTSTCTFENFIKIKYQILKTPAHKLKISDT--VRP--HVQIKKSVLER-FVHTYVVGNFLLTHLSKLREEFAI 120 (329)
Q Consensus 47 ~Pig-Av~~~~eI~d~~~~~~~~~~~~~~hg~T~agn--lA~--aaala~~ile~-le~v~~lG~~L~~gL~eL~~~~p~ 120 (329)
.|.+ .|.++.+....+.- .. -..|+-++-. +|. ..+++.++... -.|.+++..+|.++++... .++.
T Consensus 204 ~~~gAiv~gn~~~~~~a~~--~r----K~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~-G~~~ 276 (342)
T COG2008 204 APVGAIVFGNRDFAKRARR--WR----KRAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKP-GVKL 276 (342)
T ss_pred ceeeeEEEcCHHHHHHHHH--HH----HHhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcC-Ccee
Confidence 5885 45566666555432 00 0233334433 222 23334444332 4577788888888777431 1111
Q ss_pred eeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 121 VGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 121 v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.- =|+-+.+.+. ..-.......++..|++.... +..+||.-.+-+ +++|||+++...
T Consensus 277 ~~~~~t--N~vf~~l~~~--------~i~~l~~~~~~~~~~~~~~~~---~~~vRfvts~a~---~~edv~~~~~~~ 337 (342)
T COG2008 277 AFPVET--NMVFVRLPES--------AIEALRLAGALFYRGVLIGAH---GEIVRFVTSWAT---SEEDVDELVAAI 337 (342)
T ss_pred ccCCcc--cEEEEECChH--------HHHHHHhhchhheeeeeccCC---CceEEEEeeccC---CHHHHHHHHHHH
Confidence 111110 1111122110 011223345566778877642 258999887777 589999988864
No 304
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=60.23 E-value=25 Score=35.50 Aligned_cols=45 Identities=7% Similarity=-0.192 Sum_probs=28.8
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCccccceeeec
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFWDKLIVHTS 55 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~PigAv~~~ 55 (329)
..+|+++|+||+++. |. .+.....-+|+ .|.++|---++|++++.
T Consensus 175 ~~~gi~livD~a~a~----~~--~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~ 224 (427)
T PRK05994 175 HRAGLPLIVDNTLAS----PY--LIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVD 224 (427)
T ss_pred HHcCCEEEEECCccc----cc--cCCccccCCcEEEEcCccccCCCCCcEEEEEEe
Confidence 357999999999862 21 23344566883 49998622367766553
No 305
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=59.81 E-value=1.9e+02 Score=28.92 Aligned_cols=41 Identities=15% Similarity=0.001 Sum_probs=25.9
Q ss_pred HHH-HHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HIL-DSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~-~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.++ ..+.++||++.|+.. ..+.+||.- .. +.+++.+.++..
T Consensus 375 ~~~~~ll~~~gV~v~pG~~fg~~~~lRis~--~~---~~~~l~~al~rl 418 (430)
T PLN00145 375 DFCCKLAKEESVVVLPGSALGMKNWLRITF--AI---DPPSLEDGLERL 418 (430)
T ss_pred HHHHHHHHhCCEEEeCccccCCCCeEEEEe--CC---CHHHHHHHHHHH
Confidence 355 445578999988521 247788753 22 467788887753
No 306
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=57.30 E-value=2e+02 Score=30.13 Aligned_cols=58 Identities=14% Similarity=-0.059 Sum_probs=34.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCC-cch-H----HHhhcCCccccceeeech-hHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRF-V----QKDFKGSFWDKLIVHTST-CTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PD-i----~KaLgGG~~PigAv~~~~-eI~d~~~ 63 (329)
..+|+.|.+|=.+.|....-.-+....-|+ ..| + =|.+.+-+ ++|+++.++ +..+.+.
T Consensus 292 ~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~-g~G~llvr~~~~~~~~~ 356 (522)
T TIGR03799 292 QELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPM-GAGMVLFKDPALMSAIE 356 (522)
T ss_pred HHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCc-ccEEEEEeCHHHHHHhc
Confidence 467899999999887532211111112455 457 2 29876653 778998875 4444443
No 307
>PRK12566 glycine dehydrogenase; Provisional
Probab=56.59 E-value=1.3e+02 Score=34.02 Aligned_cols=59 Identities=5% Similarity=-0.131 Sum_probs=38.7
Q ss_pred HHHHHHHHHCCceeecc-CCCCCEEEEeCccccCcCCHHHHHHHHhcc--ccchhhhhhhhhhhh
Q psy7882 151 THILDSCKEHGLLLGRG-GLSGNTLTALQPKLLNYWTDFVGTPCLDCE--SKGTFQSYAGSINKL 212 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~-G~~~nvIrl~PPL~It~~t~eeId~~l~~~--~~~~~~~~~~~~~~~ 212 (329)
..+.++|.+.|+..... -+..+.++++|--.- +++|||+++++. .....+++....|..
T Consensus 826 ~dvakRL~d~Gihapt~~fPv~~~LmIepTE~e---skeEIDrf~eAL~~I~~e~~~v~~g~~~~ 887 (954)
T PRK12566 826 EDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESE---SKAELDRFVEAMLSIRAEIGKVQEGNWPA 887 (954)
T ss_pred HHHHHHHHHCCcEEeEEeeccCCEEEEEeeeeC---CHHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 45777888988865431 123678999986544 689999999985 234445555545543
No 308
>KOG3846|consensus
Probab=55.93 E-value=1.1e+02 Score=30.40 Aligned_cols=91 Identities=10% Similarity=0.047 Sum_probs=59.6
Q ss_pred hHHhH--HHHHHHHHHHHHHHHHHHHHhC-Cceee---------------EEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882 92 SVLER--FVHTYVVGNFLLTHLSKLREEF-AIVGD---------------VRGKGLMIGVDLVQDKETKVPLNSRHMTHI 153 (329)
Q Consensus 92 ~ile~--le~v~~lG~~L~~gL~eL~~~~-p~v~~---------------VRG~GLm~gIef~~d~~~~~p~~~~~~~~~ 153 (329)
+++.+ ++.+++.+-+|...|+.|.+.. +.-.. +.-+|.-..+.|..+ ...+
T Consensus 347 e~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp-----------~~~v 415 (465)
T KOG3846|consen 347 ELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSP-----------TPKV 415 (465)
T ss_pred HHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCC-----------chHH
Confidence 66665 7788888888888888876431 21112 233344455555321 2458
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+++.++|++.-. ..+|+||++|--.-. +-.|+-.+++++
T Consensus 416 fqeL~krGv~~Dk--R~PNvIRvAPvpLYN--~f~Dvy~f~n~L 455 (465)
T KOG3846|consen 416 FQELHKRGVIGDK--RRPNVIRVAPVPLYN--TFSDVYIFVNAL 455 (465)
T ss_pred HHHHHHcCeeccc--cCCCceEeecchhhc--cHHHHHHHHHHH
Confidence 9999999998764 468999999843332 456787777764
No 309
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=55.45 E-value=1e+02 Score=34.82 Aligned_cols=61 Identities=10% Similarity=-0.092 Sum_probs=39.6
Q ss_pred HHHHHHHHHHCCceeeccC-CCCCEEEEeCccccCcCCHHHHHHHHhcc--ccchhhhhhhhhhhhc
Q psy7882 150 MTHILDSCKEHGLLLGRGG-LSGNTLTALQPKLLNYWTDFVGTPCLDCE--SKGTFQSYAGSINKLT 213 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G-~~~nvIrl~PPL~It~~t~eeId~~l~~~--~~~~~~~~~~~~~~~~ 213 (329)
...+.++|.+.|+...... +....+.+.|-- ..+++|||+++++. +.....++....|...
T Consensus 816 ~~dIakrL~d~G~hapt~~~pv~g~lmiepTE---~eskeelD~f~~al~~I~~e~~~~~~g~~~~~ 879 (939)
T TIGR00461 816 AIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTE---SESLEELDRFCDAMIAIKEEINALVAGQPKGQ 879 (939)
T ss_pred HHHHHHHHHhCCeeccccCCccCCeEEEEeec---cCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Confidence 5678999999998764322 223477777743 33799999999974 3344555554555433
No 310
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=48.91 E-value=38 Score=32.51 Aligned_cols=48 Identities=8% Similarity=-0.184 Sum_probs=28.5
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHH
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTF 59 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~ 59 (329)
.++|+++|+|+++. +|.. .+-.+. ...| ..|.+ |-..+|++.++++..
T Consensus 165 ~~~~~~~ivD~a~~-~g~~--~~~~~~--~~~D~~~~s~~K~~--gp~g~g~l~~~~~~~ 217 (353)
T TIGR03235 165 EAHEAFFHVDAAQV-VGKI--TVDLSA--DRIDLISCSGHKIY--GPKGIGALVIRKRGK 217 (353)
T ss_pred HHcCCEEEEEchhh-cCCc--cccccc--cCCCEEEeehhhcC--CCCceEEEEEccCcc
Confidence 45799999999987 3332 111122 2356 23963 422368888888743
No 311
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=48.68 E-value=1.8e+02 Score=33.10 Aligned_cols=42 Identities=19% Similarity=0.007 Sum_probs=34.7
Q ss_pred HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+.+.+.++||.++... .+.+++++-... |++|||.+++++
T Consensus 422 ~~v~~~L~~~gI~l~~~~--~~~lrvs~~e~~---T~edId~L~~~l 463 (993)
T PLN02414 422 DAIADAAAKVGINLRVVD--ANTVTVSFDETT---TLEDVDKLFKVF 463 (993)
T ss_pred HHHHHHHHHCCCeeEEec--CCeEEEEeeccC---CHHHHHHHHHHH
Confidence 568899999999887643 568999988776 589999999986
No 312
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=45.96 E-value=67 Score=32.41 Aligned_cols=174 Identities=16% Similarity=0.088 Sum_probs=92.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcchH---HHhhcCCccc-cceeeechhHHHhhhhhhhc------------
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV---QKDFKGSFWD-KLIVHTSTCTFENFIKIKYQ------------ 68 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi---~KaLgGG~~P-igAv~~~~eI~d~~~~~~~~------------ 68 (329)
..||+++|+|=|-+ +| |..+-.+.|||.-=+ .|+|++ .| +|.+..|++.++.+......
T Consensus 158 k~~g~l~iVDaVsS-~G--g~~~~vd~wgiDv~itgSQK~l~~--PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~ 232 (383)
T COG0075 158 KEHGALLIVDAVSS-LG--GEPLKVDEWGIDVAITGSQKALGA--PPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKY 232 (383)
T ss_pred HHcCCEEEEEeccc-CC--CcccchhhcCccEEEecCchhccC--CCccceeEECHHHHHHHhcCCCCceeecHHHHHHH
Confidence 46799999999866 64 345566777764333 299986 24 58899999988877641100
Q ss_pred cCCCCccchhhhcc--HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCC
Q psy7882 69 ILKTPAHKLKISDT--VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKET 141 (329)
Q Consensus 69 ~~~~~~hg~T~agn--lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~ 141 (329)
.......+.|-.-+ .+..+++.. +=++. +++=+.+++.++++++++ ......+- +-.-.+.++....+.
T Consensus 233 ~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al--Gl~~~~~~~~~s~tvta~~~P~g~-- 308 (383)
T COG0075 233 MEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL--GLELFADPERRSPTVTAIKVPEGV-- 308 (383)
T ss_pred HhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCccccCcccCCCceEEEECCCCC--
Confidence 00001112232333 333333322 11222 566677777777777765 12222211 112233444432211
Q ss_pred CCCCChHHHHHHHHHHHH-CCceeecc-C-CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCKE-HGLLLGRG-G-LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~e-~GVLl~~~-G-~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+ ...+...+++ .|+.+... + ..+.++||.-- ...+.+++...+.++
T Consensus 309 ----~---~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhM---G~~~~~dv~~~l~al 357 (383)
T COG0075 309 ----D---DKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHM---GNVRPEDVLAALAAL 357 (383)
T ss_pred ----C---cHHHHHHHHHhCCEEecccccccCccEEEEecC---ccCCHHHHHHHHHHH
Confidence 1 1223334554 58777553 1 24578888642 233678898888874
No 313
>PRK06434 cystathionine gamma-lyase; Validated
Probab=44.89 E-value=90 Score=31.19 Aligned_cols=109 Identities=18% Similarity=0.170 Sum_probs=52.5
Q ss_pred EEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCc-cccceeee-chhHHHhhhhhhhccCCCCccchhhhccH
Q psy7882 11 VVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSF-WDKLIVHT-STCTFENFIKIKYQILKTPAHKLKISDTV 83 (329)
Q Consensus 11 LI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~-~PigAv~~-~~eI~d~~~~~~~~~~~~~~hg~T~agnl 83 (329)
+|+|-.+. ++ ..+...+.-.|+ -|-|+|.- .=-|++++ ++++++.+.. .. ..+|...+ .+
T Consensus 179 lvVD~t~~----s~--~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~--~~----~~~G~~~~-~~ 245 (384)
T PRK06434 179 VIVDATFA----SP--YNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVE--RR----KTLGSNPD-PI 245 (384)
T ss_pred eEEECCCC----Cc--ccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHH--HH----HhcCCCCC-HH
Confidence 46688852 11 122334445673 29998721 11355555 4455554331 00 01221111 13
Q ss_pred HHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE------------EeeceeeEEEee
Q psy7882 84 RPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV------------RGKGLMIGVDLV 136 (329)
Q Consensus 84 A~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V------------RG~GLm~gIef~ 136 (329)
.++.++.. +-++. +++-.+....+.+.|+ .||.|..| +|.|.|++|++.
T Consensus 246 ~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~----~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~ 308 (384)
T PRK06434 246 QAYLALRGLKTLGLRMEKHNKNGMELARFLR----DSKKISNVYYPDTEIGKKVLRGFGGMLSFELR 308 (384)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHH----cCCCccEEECCChHHHHHhcCCCCceEEEEEC
Confidence 33333333 33332 5555555555555444 46655544 467889999985
No 314
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=44.53 E-value=1.4e+02 Score=30.27 Aligned_cols=43 Identities=9% Similarity=-0.174 Sum_probs=24.6
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeee
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHT 54 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~ 54 (329)
.+|+++|+|+++. ++.. +.....-.| ..|.++|.-..+|++++
T Consensus 177 ~~gi~vIvD~t~a----~~~~--~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 177 EHGIPLIVDNTFA----SPYL--LRPIEHGADIVVHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred HcCCEEEEeCCCC----cccc--CChhHcCCCEEEEcCccccCCCCCceEEEEE
Confidence 5699999999864 2211 111112356 24999875445655554
No 315
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=44.41 E-value=2.2e+02 Score=28.56 Aligned_cols=114 Identities=15% Similarity=0.049 Sum_probs=54.9
Q ss_pred ccc-ceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccc-cceeeech--hHHHhhhhhhhccCCCCccc
Q psy7882 6 YRD-CGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWD-KLIVHTST--CTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 6 ~~g-iLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~P-igAv~~~~--eI~d~~~~~~~~~~~~~~hg 76 (329)
.+| +++|+|...... ..+.-+..-.| ..|-++|---- .|+++++. ++++.+.. .. ...|
T Consensus 168 ~~g~~~~vVDnT~atp------~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~--~~----~~~G 235 (386)
T PF01053_consen 168 EHGDILVVVDNTFATP------YNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLRE--FR----RLLG 235 (386)
T ss_dssp HTTT-EEEEECTTTHT------TTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHH--HH----HHHT
T ss_pred HhCCceEEeeccccce------eeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcc--hh----hhcC
Confidence 456 999999986432 12222222257 34999754212 36666554 66665442 00 1122
Q ss_pred hhhhcc--HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEE------------------eeceeeEEEe
Q psy7882 77 LKISDT--VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVR------------------GKGLMIGVDL 135 (329)
Q Consensus 77 ~T~agn--lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VR------------------G~GLm~gIef 135 (329)
.+.+.. .-+..++++ .+ |+++..+.+..+.+ ..+.||.|..|. |.|-|++|+|
T Consensus 236 ~~~~p~da~ll~rgl~Tl~~--R~~~~~~nA~~lA~----~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l 309 (386)
T PF01053_consen 236 ATLSPFDAWLLLRGLRTLPL--RMERQNENAEALAE----FLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFEL 309 (386)
T ss_dssp -B--HHHHHHHHHHHTTHHH--HHHHHHHHHHHHHH----HHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEE
T ss_pred ccchHHHHHHHhcCCCcHHH--HHHHHHHHHHHHHH----HHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEe
Confidence 222222 112234444 22 13333344433333 334578777775 6667999999
Q ss_pred ec
Q psy7882 136 VQ 137 (329)
Q Consensus 136 ~~ 137 (329)
..
T Consensus 310 ~~ 311 (386)
T PF01053_consen 310 KG 311 (386)
T ss_dssp SS
T ss_pred cc
Confidence 64
No 316
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=42.80 E-value=71 Score=31.90 Aligned_cols=50 Identities=14% Similarity=-0.061 Sum_probs=28.2
Q ss_pred cccceEEehhHhh-chhccchhhhhcccCCcch-----HHHhhcCCc-cccceeeec-hhHHHhh
Q psy7882 6 YRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHTS-TCTFENF 62 (329)
Q Consensus 6 ~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~~-~eI~d~~ 62 (329)
.+|+++|+||.+. |... .-..+-.| ..|-++|.- .-.|+++++ +++++.+
T Consensus 166 ~~gi~vIvDea~~~~~~~-------~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~ 223 (388)
T PRK08861 166 AVGALVAVDNTFLTPVLQ-------KPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEEL 223 (388)
T ss_pred HcCCEEEEECCccccccC-------CCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHH
Confidence 4689999999985 2211 11223357 349998732 113555564 4555544
No 317
>PLN02368 alanine transaminase
Probab=41.80 E-value=95 Score=31.14 Aligned_cols=59 Identities=14% Similarity=0.053 Sum_probs=35.2
Q ss_pred ccccceEEehhHhhchhccch--hhhh-ccc-CCcc------h------HHHhhc--CCccccceee---echhHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT--YLGF-QCL-QICR------F------VQKDFK--GSFWDKLIVH---TSTCTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~--~fA~-e~~-GV~P------D------i~KaLg--GG~~PigAv~---~~~eI~d~~~ 63 (329)
..||+++|.||+...+--.|. +... +.. ++.| . ++|++. -|+ =+|.++ +.+++.+.+.
T Consensus 240 ~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~Gl-RiGy~i~~~~~~~li~~~~ 318 (407)
T PLN02368 240 YQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQ-RGGYFEMTNIPPKTVEEIY 318 (407)
T ss_pred HHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCcc-ceEEEEEeCCCHHHHHHHH
Confidence 357999999999887743231 1111 110 1211 1 579985 564 788777 4778887765
Q ss_pred h
Q psy7882 64 K 64 (329)
Q Consensus 64 ~ 64 (329)
.
T Consensus 319 ~ 319 (407)
T PLN02368 319 K 319 (407)
T ss_pred H
Confidence 3
No 318
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=41.49 E-value=95 Score=31.40 Aligned_cols=103 Identities=14% Similarity=-0.063 Sum_probs=53.9
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HH-HhhcCCccccceeeechhHHHh-hhhhhhccCCCCccchh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQ-KDFKGSFWDKLIVHTSTCTFEN-FIKIKYQILKTPAHKLK 78 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~-KaLgGG~~PigAv~~~~eI~d~-~~~~~~~~~~~~~hg~T 78 (329)
...|+++|..|=||. +|+.= .......-| ++ --++|- =.+||+..++.+.=. +...+.+ ....-++|
T Consensus 167 ~k~~~i~fHvDAvQa-~Gkip----i~~~~~~vD~ls~SaHK~~Gp-kGiGaLyv~~~~~~~p~i~GGgQ--E~g~RsGT 238 (386)
T COG1104 167 CKERGILFHVDAVQA-VGKIP----IDLEELGVDLLSFSAHKFGGP-KGIGALYVRPGVRLEPLIHGGGQ--ERGLRSGT 238 (386)
T ss_pred HHHcCCeEEEehhhh-cCcee----ccccccCcceEEeehhhccCC-CceEEEEECCCCccCceeccCcC--CCCCCCCC
Confidence 346789999999998 77752 222222256 32 224332 256888877655421 1110000 00111233
Q ss_pred hhcc--HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHH
Q psy7882 79 ISDT--VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKL 114 (329)
Q Consensus 79 ~agn--lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL 114 (329)
-+-. ++++.|++. +-++. ..++..+-++|.++|.+.
T Consensus 239 env~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~ 279 (386)
T COG1104 239 ENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEI 279 (386)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3322 444444433 33433 677888888888888765
No 319
>PRK07671 cystathionine beta-lyase; Provisional
Probab=41.32 E-value=66 Score=31.80 Aligned_cols=53 Identities=11% Similarity=-0.115 Sum_probs=28.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeee-chhHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHT-STCTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~-~~eI~d~~~ 63 (329)
..+|+++|+||++... -.+.. ...-.| +.|.++|----+ |++++ ++++++.+.
T Consensus 161 ~~~g~~lvvD~a~~~~-~~~~p-----~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~ 220 (377)
T PRK07671 161 KEKGLLTIVDNTFMTP-YWQSP-----ISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLH 220 (377)
T ss_pred HHcCCEEEEECCCCcc-ccCCh-----hhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHH
Confidence 3579999999997531 11111 122346 359998531012 43444 456665543
No 320
>PRK05967 cystathionine beta-lyase; Provisional
Probab=40.60 E-value=64 Score=32.44 Aligned_cols=51 Identities=14% Similarity=-0.014 Sum_probs=29.8
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeeechhHHHhh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHTSTCTFENF 62 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~~~eI~d~~ 62 (329)
.+|+++|+|+++... .+ +.-...-.| ..|.++|.- +=.|++.++++.++.+
T Consensus 177 ~~g~~vvVD~t~a~p----~~--~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l 233 (395)
T PRK05967 177 RHGAIVMMDNTWATP----LY--FRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQL 233 (395)
T ss_pred HhCCEEEEECCccCc----ee--cChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHH
Confidence 579999999998643 11 111222355 349988732 1236666677665544
No 321
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=39.66 E-value=4e+02 Score=26.61 Aligned_cols=166 Identities=10% Similarity=0.004 Sum_probs=87.7
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch----------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF----------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD----------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~ 74 (329)
.-||+.||+|-.. |.-..|.. ...++|- ++|.=-=| .-+|.+++.+++..++.. -+ .-...
T Consensus 209 ~~~giPliIDnAY-g~PFP~ii----fsd~~~~w~~NiilC~SLSK~GLPG-~R~GIiIane~viqaitn--mn-~iisL 279 (417)
T COG3977 209 RQHGIPLIIDNAY-GVPFPGII----FSDATPLWNENIILCMSLSKLGLPG-SRCGIIIANEKVIQAITN--MN-GIISL 279 (417)
T ss_pred hhcCCcEEEeccc-CCCCCcee----cccccccCCCCEEEEeehhhcCCCC-cceeEEEccHHHHHHHHh--cc-ceeee
Confidence 4578999999743 23223322 2234442 45652223 257999999999887753 11 11246
Q ss_pred cchhhhccHHHHHHHHh-hHH-------hH--HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCC
Q psy7882 75 HKLKISDTVRPHVQIKK-SVL-------ER--FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVP 144 (329)
Q Consensus 75 hg~T~agnlA~aaala~-~il-------e~--le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p 144 (329)
|++.|+.++++- .++. +++ .. .++++..-..|+..| ..+++. --++.|.++..-.-+|- |
T Consensus 280 ap~~~G~Aia~~-mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~l----p~~~~~-iHkpEGAIFlWLWf~dL----P 349 (417)
T COG3977 280 APGRMGPAIAAE-MIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYL----PEYRCL-IHKPEGAIFLWLWFKDL----P 349 (417)
T ss_pred cCCCccHHHHHH-HhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhc----Ccccee-eecCCcceeehhhhccC----C
Confidence 777777776553 3443 332 21 233333333333333 233331 12456655433332221 1
Q ss_pred CChHHHHHHHHHHHHCCceeeccC-----------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 145 LNSRHMTHILDSCKEHGLLLGRGG-----------LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 145 ~~~~~~~~~~~~l~e~GVLl~~~G-----------~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
-....+++++.++||++.|.. +.+..+|+. ++- ++++|+..+.+.
T Consensus 350 ---Itt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn--~~~---~~~~ie~Gva~l 405 (417)
T COG3977 350 ---ITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMN--YVP---EPEKIEKGVAIL 405 (417)
T ss_pred ---CCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEe--cCC---CHHHHHHHHHHH
Confidence 124568899999999998742 123344442 222 578888888764
No 322
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=38.66 E-value=2.3e+02 Score=28.79 Aligned_cols=52 Identities=17% Similarity=-0.052 Sum_probs=29.8
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcchHH-----HhhcCCcccc-ceeeech-hHHHhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFVQ-----KDFKGSFWDK-LIVHTST-CTFENF 62 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi~-----KaLgGG~~Pi-gAv~~~~-eI~d~~ 62 (329)
..+|+++|+|....+ +-+ ++-+..=.||+ |-|+|.-==+ |+|+++. ++++.+
T Consensus 176 ~~~g~~vvVDNTfat----P~~--q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~ 234 (396)
T COG0626 176 KAYGALVVVDNTFAT----PVL--QRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELL 234 (396)
T ss_pred HhcCCEEEEECCccc----ccc--cChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHH
Confidence 456799999998653 222 23332336743 9998875333 5566444 555543
No 323
>PRK09275 aspartate aminotransferase; Provisional
Probab=37.40 E-value=4e+02 Score=28.03 Aligned_cols=47 Identities=11% Similarity=0.108 Sum_probs=31.0
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTC 57 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~e 57 (329)
.+|+.+|.|||..-|. +.+.. ....-|| ++|..+ .| +=+|.+++.++
T Consensus 274 ~~~l~II~DEvY~~f~--~~~~s--~~~~~~~~~I~v~SfSK~f~mtG-~RlG~i~~~~~ 328 (527)
T PRK09275 274 RPDLMIITDDVYGTFV--DDFRS--LFAVLPYNTILVYSFSKYFGATG-WRLGVIALHED 328 (527)
T ss_pred CCCcEEEECCCChhhc--ccccC--HHHhCCCCEEEEeehhhhccCcH-hHHhhhhcCch
Confidence 4599999999998773 21111 1122465 679986 66 47888888875
No 324
>PRK08114 cystathionine beta-lyase; Provisional
Probab=37.38 E-value=48 Score=33.35 Aligned_cols=50 Identities=14% Similarity=0.086 Sum_probs=30.5
Q ss_pred cceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCcc-ccceeeechhHHHhhh
Q psy7882 8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFW-DKLIVHTSTCTFENFI 63 (329)
Q Consensus 8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~-PigAv~~~~eI~d~~~ 63 (329)
|+++|+|-++.. |.. ++-...-.|+ -|.|+|.-- =.|++.++++.++.+.
T Consensus 179 g~~lvVDnT~a~----p~~--~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~ 234 (395)
T PRK08114 179 DAVIMIDNTWAA----GVL--FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLR 234 (395)
T ss_pred CCEEEEECCCcc----ccc--cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHH
Confidence 699999999862 322 3333344673 399988621 2366666777666543
No 325
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=34.52 E-value=2.8e+02 Score=28.26 Aligned_cols=14 Identities=7% Similarity=-0.107 Sum_probs=11.5
Q ss_pred ccccceEEehhHhh
Q psy7882 5 YYRDCGVVVSAVDF 18 (329)
Q Consensus 5 ~~~giLLI~DEVqT 18 (329)
..+|+++|+|+.+.
T Consensus 182 ~~~gi~liVD~t~a 195 (436)
T PRK07812 182 HEAGVPLIVDNTIA 195 (436)
T ss_pred HHcCCEEEEECCCc
Confidence 36799999999765
No 326
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=32.22 E-value=4.2e+02 Score=30.07 Aligned_cols=43 Identities=14% Similarity=0.029 Sum_probs=33.2
Q ss_pred HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.+.++|+.++.. .++.+.++.--+. |++||+.+++++
T Consensus 383 ~~~i~~~~~~~gi~l~~~--~~~~i~~s~~E~~---t~~di~~l~~~~ 425 (939)
T TIGR00461 383 SSELLKAAEEFNINLRAV--DTTTVGIALDETT---TKADVENLLKVF 425 (939)
T ss_pred HHHHHHHHHHCCCeeeec--CCCEEEEEeecCC---CHHHHHHHHHHh
Confidence 456889999999998763 3567877655444 689999999986
No 327
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=31.80 E-value=88 Score=31.61 Aligned_cols=125 Identities=11% Similarity=0.062 Sum_probs=61.8
Q ss_pred ccccccceEEehhHhhchhccc-hhhhhcccCCcchH----------HHhhcCCccccceeee-chhHHHhhhhhhhccC
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNG-TYLGFQCLQICRFV----------QKDFKGSFWDKLIVHT-STCTFENFIKIKYQIL 70 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG-~~fA~e~~GV~PDi----------~KaLgGG~~PigAv~~-~~eI~d~~~~~~~~~~ 70 (329)
+-.+||+.+|-|||..=+-.+| +.+ ....+.|+. +|+..=..+-+|.++. .++.-+.+... ..
T Consensus 186 lc~kh~v~VISDEIHaDlv~~g~~h~--~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~---l~ 260 (388)
T COG1168 186 LCLRHGVRVISDEIHADLVLGGHKHI--PFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKR---LK 260 (388)
T ss_pred HHHHcCCEEEeecccccccccCCCcc--chhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHH---HH
Confidence 4468999999999999886666 322 223466761 3765322235554444 44443445431 11
Q ss_pred CCCccchhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCcee--eEEeeceeeEEEee
Q psy7882 71 KTPAHKLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVG--DVRGKGLMIGVDLV 136 (329)
Q Consensus 71 ~~~~hg~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~--~VRG~GLm~gIef~ 136 (329)
....|+.+.-|-+|..+|.+. +.|++ .+-++.-=+++.+.+++. .|.+. .-.|.=|+ -++|.
T Consensus 261 ~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~---~P~v~v~~p~gTYL~-WLD~r 327 (388)
T COG1168 261 RNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKH---LPGVKVTEPQGTYLA-WLDCR 327 (388)
T ss_pred HhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhh---CCCcEEecCCCceee-eeecc
Confidence 113344332333455555554 45544 333444444444444432 35443 33344333 35664
No 328
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=31.34 E-value=1.2e+02 Score=30.65 Aligned_cols=44 Identities=9% Similarity=-0.000 Sum_probs=23.0
Q ss_pred HHHHHHHHHHCCceeeccC-------CCCCEEEEeCc-cccCcCCHHHHHHH
Q psy7882 150 MTHILDSCKEHGLLLGRGG-------LSGNTLTALQP-KLLNYWTDFVGTPC 193 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G-------~~~nvIrl~PP-L~It~~t~eeId~~ 193 (329)
.....+.|-+.||++.... ..+..|||.-| ++.--..++|+.++
T Consensus 344 g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~i 395 (399)
T PF00464_consen 344 GKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEI 395 (399)
T ss_dssp HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHH
T ss_pred hHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHH
Confidence 3456778889999997531 12356787733 33333335555544
No 329
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=29.57 E-value=6.3e+02 Score=25.90 Aligned_cols=54 Identities=15% Similarity=0.029 Sum_probs=30.4
Q ss_pred ccccceEEehhHhhchhccchhhh---------hcccCCcchH---H--HhhcCCccccceeeechhHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLG---------FQCLQICRFV---Q--KDFKGSFWDKLIVHTSTCTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA---------~e~~GV~PDi---~--KaLgGG~~PigAv~~~~eI~d~~~ 63 (329)
..||+++|.|- |+|-.|.... ++....-.|+ + |.++|- -.|+++++++..+.+.
T Consensus 242 ~~~g~~vivD~---~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~~~~i~~l~ 309 (454)
T TIGR00474 242 REHGLPVMEDL---GSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIERLK 309 (454)
T ss_pred HHcCCeEEEEC---CCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEECHHHHHhhh
Confidence 45799999994 4443322110 0111122462 3 998764 2577888888776544
No 330
>PRK08064 cystathionine beta-lyase; Provisional
Probab=28.51 E-value=1.3e+02 Score=29.94 Aligned_cols=52 Identities=10% Similarity=-0.142 Sum_probs=27.6
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeec-hhHHHhhh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTS-TCTFENFI 63 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~-~eI~d~~~ 63 (329)
.+|+++|+||.+..+- ... .. .+| .| ..|.++|.---+ |+++++ +++.+.+.
T Consensus 166 ~~g~~vvvD~a~~~~~-~~~--~~-~~g--~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~ 224 (390)
T PRK08064 166 AIGCLTFVDNTFLTPL-LQK--PL-DLG--ADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLY 224 (390)
T ss_pred HcCCEEEEECCCCccc-ccC--ch-hhC--CcEEEeecceeccCCccceeEEEEeCCHHHHHHHH
Confidence 4689999999875321 101 11 123 46 349886521012 445554 56766654
No 331
>KOG0633|consensus
Probab=28.13 E-value=5.8e+02 Score=25.01 Aligned_cols=167 Identities=11% Similarity=0.067 Sum_probs=76.4
Q ss_pred cceEEehhHhhchhccchhhhhcccCCcch------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
..|+++||..--| +|-........--|. ++|.+|=-.+-+|-...+.+|.+.+.. .-.++ + .+-.+
T Consensus 191 nglVVvDEAYidF--sg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~----~KaPY-N-iS~~~ 262 (375)
T KOG0633|consen 191 NGLVVVDEAYIDF--SGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNR----AKAPY-N-ISVAG 262 (375)
T ss_pred CcEEEEeeeeEee--ccccccchHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHh----ccCCc-c-ccchh
Confidence 4789999998766 342222222111233 678765332467777778878776542 00011 1 11123
Q ss_pred cHHHHHHHHh---hHHhHH-HHHHHHHHHHHHHHHHHHHhCCceeeEEe-e-ceeeEEEeecCCCCCCCCChHHHHHH-H
Q psy7882 82 TVRPHVQIKK---SVLERF-VHTYVVGNFLLTHLSKLREEFAIVGDVRG-K-GLMIGVDLVQDKETKVPLNSRHMTHI-L 154 (329)
Q Consensus 82 nlA~aaala~---~ile~l-e~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~-GLm~gIef~~d~~~~~p~~~~~~~~~-~ 154 (329)
..+..+|+.. +.++.+ +-+.+--.+|...|.+ .|.+.++-| . .-++-+++... +...+..+ .
T Consensus 263 s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~----v~~~~~~~gg~daNFiLi~v~~~-------~n~~akkly~ 331 (375)
T KOG0633|consen 263 SVAALAALSDSNGKKMEDVRDAIVRERERLFKELTE----VPFLNDYPGGSDANFILIEVTGG-------DNGMAKKLYK 331 (375)
T ss_pred HHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhc----CccccCCCCcccccEEEEEEcCC-------CcHHHHHHHH
Confidence 3333344432 223221 1111112222222332 233333222 1 23455666532 12444444 5
Q ss_pred HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882 155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDC 196 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~ 196 (329)
+.+-.+||.++..|... .+.--|-||..|.||=+.++++
T Consensus 332 q~at~~gVvVRfrgse~---~c~G~lRitvGt~EentvL~k~ 370 (375)
T KOG0633|consen 332 QDATKMGVVVRFRGSEE---GCKGYLRITVGTPEENTVLMKC 370 (375)
T ss_pred HHHHhcceEEEEcCCcc---ccceeEEEEcCCcccchHHHHH
Confidence 66778999998755321 1111222333456666666655
No 332
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=27.01 E-value=58 Score=33.58 Aligned_cols=86 Identities=14% Similarity=0.109 Sum_probs=62.7
Q ss_pred EEehhHhhchhccchhhhhcccCCcchHHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhccHHHHHHHH
Q psy7882 11 VVVSAVDFGSGDNGTYLGFQCLQICRFVQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISDTVRPHVQIK 90 (329)
Q Consensus 11 LI~DEVqTGfGRTG~~fA~e~~GV~PDi~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~agnlA~aaala 90 (329)
+.-|-+.+|.|-||.+......-+..++..++..|. .+++. .- .+...|+..++++++....++
T Consensus 275 i~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~--~~~f~-HG-------------~TYsghPlacAaAla~L~i~e 338 (449)
T COG0161 275 IVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGD--AGAFM-HG-------------HTYSGNPLACAAALANLDILE 338 (449)
T ss_pred CCCCeeeecccccccchhhHhHhhhHHHHHHHhccc--CCeec-cC-------------CccccCHHHHHHHHHHHHHHH
Confidence 567888899999999888887777888988888884 22221 11 123579998888899999999
Q ss_pred h-hHHhH-HHHHHHHHHHHHHHHH
Q psy7882 91 K-SVLER-FVHTYVVGNFLLTHLS 112 (329)
Q Consensus 91 ~-~ile~-le~v~~lG~~L~~gL~ 112 (329)
. +++++ -+.-..+.+.|++.+.
T Consensus 339 ~e~l~~~~~~~~~~l~~~L~~~l~ 362 (449)
T COG0161 339 EEDLLERVAEIGAYLQAGLQAALA 362 (449)
T ss_pred hcCHHHHHHHHHHHHHHHHHHhcc
Confidence 8 88888 4455666666766444
No 333
>KOG0257|consensus
Probab=26.37 E-value=1.3e+02 Score=30.70 Aligned_cols=59 Identities=10% Similarity=-0.104 Sum_probs=38.3
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch----------HHHhhcCCccccceeeechhHHHhhh
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF----------VQKDFKGSFWDKLIVHTSTCTFENFI 63 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD----------i~KaLgGG~~PigAv~~~~eI~d~~~ 63 (329)
+-..||+++|.|||.--+--.|.-+.. -... |+ .+|..+-=.+-+|=+++.+.++....
T Consensus 200 l~~k~~~lvisDevYe~~v~d~~~h~r-~asl-Pgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~ 268 (420)
T KOG0257|consen 200 LCKKHGLLVISDEVYEWLVYDGNKHIR-IASL-PGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALF 268 (420)
T ss_pred HHHHCCEEEEEhhHhHHHhhCCCccee-eecC-CchhheEEEeccccceeeeeeeeeeeeechHHhhhhHH
Confidence 346799999999999877555531111 1122 77 35776543367888888888887654
No 334
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=25.45 E-value=5.7e+02 Score=26.18 Aligned_cols=110 Identities=11% Similarity=0.088 Sum_probs=51.6
Q ss_pred HHHHHHHHhhHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEE-EeecCCCCCCCCCh-HHHHHHHHH---
Q psy7882 83 VRPHVQIKKSVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGV-DLVQDKETKVPLNS-RHMTHILDS--- 156 (329)
Q Consensus 83 lA~aaala~~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gI-ef~~d~~~~~p~~~-~~~~~~~~~--- 156 (329)
.|+|++|...+=.+ +.+--..-+||.++|.+. .-|++..+-|.+.++-. +|-+.. ..+.|+. .++..++.+
T Consensus 314 ealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~~--GVpi~~paGGHavfvda~~~lphi-p~eqFpaqala~ely~e~Gi 390 (471)
T COG3033 314 EALAVGLREGVNFDYLAHRVAQVQYLADGLEEA--GVPIVQPAGGHAVFVDAGKFLPHI-PAEQFPAQALACELYKEAGI 390 (471)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhc--CCeeEecCCCceEEeehhhhcCCC-ChhhCcHHHHHHHHHHHhCe
Confidence 56777765411111 333333445677777664 34566667777654422 121111 1112221 122223222
Q ss_pred -HHHCCceeeccCC--------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 -CKEHGLLLGRGGL--------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 -l~e~GVLl~~~G~--------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+.|.+...... .-+.+|+.-|=-.. |.+.+|.+++++
T Consensus 391 RavElG~~~~~rd~ktg~q~~~~~elvRltipRrtY--t~~HmD~V~~a~ 438 (471)
T COG3033 391 RAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTY--TQTHMDFVIEAF 438 (471)
T ss_pred eeeeeeceecccCCCccccCCCchheeeEecccccc--chhHHHHHHHHH
Confidence 1234444432111 12678877554443 678899988864
No 335
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=25.35 E-value=6.9e+02 Score=24.90 Aligned_cols=177 Identities=11% Similarity=0.008 Sum_probs=90.9
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCccc-cceeeechhHHHhhhhhh-h----ccCC----
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFWD-KLIVHTSTCTFENFIKIK-Y----QILK---- 71 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~P-igAv~~~~eI~d~~~~~~-~----~~~~---- 71 (329)
+++++|+|=|-+ +| |.-+-++ + -|+ .|+|++ .| +|.+..+++..+...... + ....
T Consensus 154 ~~~lliVDavSs-~g--~~~l~~d--~--iDv~~tgsQK~L~~--ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~ 224 (374)
T TIGR01365 154 REGLTICDATSA-AF--AQDLDYH--K--LDVVTFSWQKVLGG--EGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKG 224 (374)
T ss_pred CCCcEEEEccch-hc--CCCCChh--H--CcEEEEechhccCC--CCceEEEEECHHHHHHHhhcCCCCCChhhhccccc
Confidence 588999998755 43 2222222 1 452 399976 34 478888988876544200 0 0000
Q ss_pred -----CCccchhhhc-cH----HHHHHHH---h-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCce--eeEEeeceeeEEE
Q psy7882 72 -----TPAHKLKISD-TV----RPHVQIK---K-SVLER-FVHTYVVGNFLLTHLSKLREEFAIV--GDVRGKGLMIGVD 134 (329)
Q Consensus 72 -----~~~hg~T~ag-nl----A~aaala---~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v--~~VRG~GLm~gIe 134 (329)
....+.|..- ++ ++..+++ . +=++. .++-+++++.++++++++---.... .+.|. -.+.++.
T Consensus 225 ~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS-~tvt~v~ 303 (374)
T TIGR01365 225 GKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRS-NTSVCLK 303 (374)
T ss_pred cchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcC-CCeEEEE
Confidence 0001222222 22 2222222 1 11222 5566777777777777652011111 12332 2335555
Q ss_pred eecCCCC--C-CCCChHHHHHHHHHHHHCCceeeccC--CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 135 LVQDKET--K-VPLNSRHMTHILDSCKEHGLLLGRGG--LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 135 f~~d~~~--~-~p~~~~~~~~~~~~l~e~GVLl~~~G--~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+..+... . .| ..++...+.+.+.++|+.+.+.. ..++++||.- +.+.+.+||+.+++++
T Consensus 304 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~---~G~i~~~di~~l~~~l 367 (374)
T TIGR01365 304 VVDPAIDALDEDA-QADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWC---GATVEKSDLECLCPWL 367 (374)
T ss_pred eCCccccccccch-hhHHHHHHHHHHHHCCEEEeccccccCCCceEEec---CCcCCHHHHHHHHHHH
Confidence 5221100 0 00 11245678999999999887532 2358889864 5556799999999874
No 336
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=22.67 E-value=4.6e+02 Score=26.70 Aligned_cols=41 Identities=10% Similarity=-0.176 Sum_probs=24.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccce
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLI 51 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigA 51 (329)
..||+++|.|++.. | ...++-+..=.| +.|-++|--.-++.
T Consensus 174 ~~~gi~livD~T~~----t--P~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G 219 (432)
T PRK06702 174 KELEVPFIVDNTLA----T--PYLCQAFEHGANIIVHSTTKYIDGHASSLGG 219 (432)
T ss_pred HHcCCEEEEECCCC----c--hhhCChhhcCCCEEEEccccccCCCcceece
Confidence 46899999999852 2 223342323356 45888775444543
No 337
>KOG3110|consensus
Probab=22.29 E-value=42 Score=29.15 Aligned_cols=48 Identities=13% Similarity=-0.011 Sum_probs=29.4
Q ss_pred eEEehhHhhchhccchhhhhcccCCcchHHHhhcCCccccceeeechhH
Q psy7882 10 GVVVSAVDFGSGDNGTYLGFQCLQICRFVQKDFKGSFWDKLIVHTSTCT 58 (329)
Q Consensus 10 LLI~DEVqTGfGRTG~~fA~e~~GV~PDi~KaLgGG~~PigAv~~~~eI 58 (329)
+++--||.+||||-++-.++--.++.-+..+.+-.+ .|.|+.-+-..+
T Consensus 13 ~~~~g~VVrGFGRGskeLGiPTAN~~~~~v~~l~~~-l~~GvYfG~A~v 60 (153)
T KOG3110|consen 13 LFFGGEVVRGFGRGSKELGIPTANFPENVVPKLPED-LPSGVYFGWAHV 60 (153)
T ss_pred EEecCeEEEecCCCccccCCccCCCCHHHHhccccc-CCCceEEEeeee
Confidence 344559999999977654444444444455555555 377776665443
No 338
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=21.94 E-value=8.3e+02 Score=24.67 Aligned_cols=42 Identities=10% Similarity=0.011 Sum_probs=30.1
Q ss_pred HHHHHHHHHHCCceeeccCCCCCEEEEeC-ccccCcCCHHHHHHHHhc
Q psy7882 150 MTHILDSCKEHGLLLGRGGLSGNTLTALQ-PKLLNYWTDFVGTPCLDC 196 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~P-PL~It~~t~eeId~~l~~ 196 (329)
+..+++.+.++||+--. ..++++||.| ||-.+ -.|+=..+++
T Consensus 353 ~~~V~qaLi~rGVigD~--R~P~vlRfgftPlY~~---~~DVw~AV~~ 395 (407)
T COG3844 353 GYQVMQALIDRGVIGDF--REPDVLRFGFTPLYVS---FVDVWDAVDA 395 (407)
T ss_pred HHHHHHHHHHcCccccc--cCCCeeeecCccceec---hhHHHHHHHH
Confidence 56799999999998754 3589999986 44443 3566555554
No 339
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=20.90 E-value=2.3e+02 Score=29.25 Aligned_cols=112 Identities=13% Similarity=0.009 Sum_probs=56.3
Q ss_pred cccccceEEehhHhhchhccchhhh----hcccCCcc-----------h--HHHhhcCCccccceeee--chhHHHhhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLG----FQCLQICR-----------F--VQKDFKGSFWDKLIVHT--STCTFENFIK 64 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA----~e~~GV~P-----------D--i~KaLgGG~~PigAv~~--~~eI~d~~~~ 64 (329)
...||+.+|.|=-+. || .+ +|- -.+.+..+ | ++|+..-+..|+|.+++ .+++++....
T Consensus 200 A~~~Gl~vi~DaAR~-~g-NA-~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~ 276 (450)
T TIGR02618 200 CEAHGIKVFYDATRC-VE-NA-YFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDDEMFQSAKE 276 (450)
T ss_pred HHHcCCEEEEEccch-hh-Ch-hhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCHHHHHHHHH
Confidence 346899999996554 21 11 111 12345554 2 34666555569977776 5666665442
Q ss_pred hhhccCCCCccc-hhhhc---c--HHHHHHHHhhHHhH--HHHHHHHHHHHHHHHHHHHHhCCceeeEEe
Q psy7882 65 IKYQILKTPAHK-LKISD---T--VRPHVQIKKSVLER--FVHTYVVGNFLLTHLSKLREEFAIVGDVRG 126 (329)
Q Consensus 65 ~~~~~~~~~~hg-~T~ag---n--lA~aaala~~ile~--le~v~~lG~~L~~gL~eL~~~~p~v~~VRG 126 (329)
... ..-| .||++ . .|++.++.. .+++ .++.....++|.++|++. ..|++..+.|
T Consensus 277 --~~~---~~eG~~tyGgla~r~~~ala~gL~e-~~~~~y~~~r~~~a~~La~~L~~~--Gvpv~~p~gg 338 (450)
T TIGR02618 277 --LVV---VFEGMPSYGGLAGRDMEAMAIGIRE-AVDYEYIEHRVKQVRYLGDKLKAA--GVPIVEPVGG 338 (450)
T ss_pred --Hhh---hcCCccccCchhhhhHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHC--CCcccCCCCc
Confidence 110 0111 23333 3 455556654 2222 445555566777777665 3444443444
No 340
>KOG4476|consensus
Probab=20.31 E-value=42 Score=31.68 Aligned_cols=18 Identities=11% Similarity=-0.079 Sum_probs=15.8
Q ss_pred cccceEEehhHhhchhcc
Q psy7882 6 YRDCGVVVSAVDFGSGDN 23 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRT 23 (329)
+.|.+|||||.+.|+.|-
T Consensus 45 rsGsIFVf~Ee~sGiKRW 62 (248)
T KOG4476|consen 45 RSGSIFVFDEEESGIKRW 62 (248)
T ss_pred ecCCEEEEeeccccceec
Confidence 458999999999999883
No 341
>COG5037 TOS9 Gluconate transport-inducing protein [Signal transduction mechanisms / Carbohydrate transport and metabolism]
Probab=20.31 E-value=42 Score=31.68 Aligned_cols=18 Identities=11% Similarity=-0.079 Sum_probs=15.8
Q ss_pred cccceEEehhHhhchhcc
Q psy7882 6 YRDCGVVVSAVDFGSGDN 23 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRT 23 (329)
+.|.+|||||.+.|+.|-
T Consensus 45 rsGsIFVf~Ee~sGiKRW 62 (248)
T COG5037 45 RSGSIFVFDEEESGIKRW 62 (248)
T ss_pred ecCCEEEEeeccccceec
Confidence 458999999999999883
No 342
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=20.22 E-value=3e+02 Score=27.12 Aligned_cols=170 Identities=11% Similarity=0.038 Sum_probs=83.6
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch-H-H---HhhcCCccccceeeechhHHHhhhhhhhccCC---CCccchh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-V-Q---KDFKGSFWDKLIVHTSTCTFENFIKIKYQILK---TPAHKLK 78 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-i-~---KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~---~~~hg~T 78 (329)
+|+.|++.=..| .||. ....-.+.+| | + |+++..- |+|++.++++..+.+...+-...+ .-..|.|
T Consensus 185 ~gvPlllN~AYt-~Grm----pvs~ke~g~DFiVgSGHKsmAAs~-PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT 258 (382)
T COG1103 185 YGVPLLLNCAYT-VGRM----PVSGKEIGADFIVGSGHKSMAASA-PIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCT 258 (382)
T ss_pred cCCceEeeccee-eccc----cccccccCCCEEEecCccchhccC-CeeEEeehhHHHHHHHhhcccccccceeeeeccc
Confidence 467777765555 4442 2333457789 2 2 9988874 999999999988876531100000 0134555
Q ss_pred hhcc-HHHHHHHHhhHHhH---HHHHHHHHHHHHHHHHHHHH--hCCceeeEEeeceeeEEEeecCCCCCCCCC------
Q psy7882 79 ISDT-VRPHVQIKKSVLER---FVHTYVVGNFLLTHLSKLRE--EFAIVGDVRGKGLMIGVDLVQDKETKVPLN------ 146 (329)
Q Consensus 79 ~agn-lA~aaala~~ile~---le~v~~lG~~L~~gL~eL~~--~~p~v~~VRG~GLm~gIef~~d~~~~~p~~------ 146 (329)
--|. +.+..|--..+.++ .+.=-+...+|.+.|+++-. +.+ ..-...-||. |..+ . |.
T Consensus 259 ~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG--~rPk~HdLm~---Fetp-~----f~eIakk~ 328 (382)
T COG1103 259 VRGAPIVTLMASFPHVVERVKRWDEEVEKARWFVAELEKIGGVKQLG--ERPKNHDLMK---FETP-V----FHEIAKKH 328 (382)
T ss_pred ccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhC--CCCcccceee---ecCc-h----HHHHHHhC
Confidence 4444 33322211134333 22223445556666665520 000 0001112222 2111 0 10
Q ss_pred hHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
......++.++.++||.-...|. ...+++ .+.-.+.++++..++++
T Consensus 329 ~r~gyFlY~ELK~RgI~GI~~G~-Tk~~K~----svyGl~~Eqve~V~~af 374 (382)
T COG1103 329 KRKGYFLYEELKKRGIHGIQPGQ-TKYFKL----SVYGLSWEQVEYVVDAF 374 (382)
T ss_pred cCCceeeHHHHHhcCccccccCc-eeEEEE----EeecCCHHHHHHHHHHH
Confidence 01122357889999987544442 233333 23334689999988874
No 343
>PRK05939 hypothetical protein; Provisional
Probab=20.00 E-value=1.8e+02 Score=29.10 Aligned_cols=44 Identities=16% Similarity=-0.117 Sum_probs=25.0
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeee
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHT 54 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~ 54 (329)
..+|+++|+|+++... .. ++....-.| +.|.++|.---++.+++
T Consensus 158 ~~~gi~livD~t~a~~----~~--~~~~~~gaDivv~S~sK~~~g~g~~igg~v~ 206 (397)
T PRK05939 158 RERGLLYVVDNTMTSP----WL--FRPKDVGASLVINSLSKYIAGHGNALGGAVT 206 (397)
T ss_pred HHcCCEEEEECCcccc----cc--cCccccCCEEEEecCeecccCCCCeEEEEEe
Confidence 3579999999997421 11 122222356 35999973234555444
Done!