Query psy7882
Match_columns 329
No_of_seqs 269 out of 1822
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 21:13:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7882.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7882hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e3q_A Pyruvate transaminase; 100.0 7.4E-41 2.5E-45 336.6 16.4 187 3-197 265-461 (473)
2 4atq_A 4-aminobutyrate transam 100.0 1.3E-40 4.5E-45 333.3 16.2 181 3-197 255-448 (456)
3 4ao9_A Beta-phenylalanine amin 100.0 1.6E-32 5.3E-37 274.9 14.9 179 3-197 249-439 (454)
4 4a0g_A Adenosylmethionine-8-am 100.0 1.2E-31 3.9E-36 285.8 7.1 185 4-197 625-821 (831)
5 3hmu_A Aminotransferase, class 100.0 9.5E-30 3.3E-34 253.9 16.4 181 4-197 253-445 (472)
6 3i5t_A Aminotransferase; pyrid 100.0 8.4E-30 2.9E-34 254.3 15.9 198 4-210 251-459 (476)
7 3gju_A Putative aminotransfera 100.0 1.6E-27 5.5E-32 235.3 17.8 189 4-197 251-449 (460)
8 4a6r_A Omega transaminase; tra 99.9 1.9E-27 6.6E-32 234.7 16.7 183 4-197 249-442 (459)
9 3n5m_A Adenosylmethionine-8-am 99.9 3.9E-27 1.3E-31 231.2 17.7 189 4-197 245-445 (452)
10 3tfu_A Adenosylmethionine-8-am 99.9 7.3E-27 2.5E-31 231.9 15.8 174 5-197 265-446 (457)
11 4ffc_A 4-aminobutyrate aminotr 99.9 1.5E-26 5E-31 228.8 16.4 180 4-197 255-442 (453)
12 3oks_A 4-aminobutyrate transam 99.9 2.2E-26 7.5E-31 227.2 17.5 180 4-197 257-444 (451)
13 3dod_A Adenosylmethionine-8-am 99.9 4.7E-26 1.6E-30 223.8 17.7 186 4-197 241-436 (448)
14 1z7d_A Ornithine aminotransfer 99.9 1.4E-24 4.8E-29 213.2 16.6 173 4-197 242-422 (433)
15 3i4j_A Aminotransferase, class 99.9 3.1E-24 1.1E-28 208.6 16.6 185 5-197 222-421 (430)
16 2oat_A Ornithine aminotransfer 99.9 5.8E-24 2E-28 209.4 15.1 171 5-197 254-432 (439)
17 3dxv_A Alpha-amino-epsilon-cap 99.9 1.7E-22 6E-27 196.8 16.6 179 5-197 232-418 (439)
18 1zod_A DGD, 2,2-dialkylglycine 99.9 2E-22 7E-27 195.7 16.9 182 5-197 234-425 (433)
19 3nx3_A Acoat, acetylornithine 99.9 2.6E-22 8.9E-27 192.4 16.9 170 5-197 210-388 (395)
20 2pb2_A Acetylornithine/succiny 99.9 2.5E-22 8.5E-27 196.0 14.1 172 5-197 232-411 (420)
21 3l44_A Glutamate-1-semialdehyd 99.9 5.5E-22 1.9E-26 193.0 15.8 179 4-197 232-423 (434)
22 2yky_A Beta-transaminase; tran 99.8 4.2E-24 1.4E-28 214.3 0.0 180 2-197 261-453 (465)
23 3a8u_X Omega-amino acid--pyruv 99.9 8.5E-22 2.9E-26 192.7 15.1 182 5-197 250-440 (449)
24 1ohv_A 4-aminobutyrate aminotr 99.9 5.3E-22 1.8E-26 197.7 12.1 165 4-197 288-464 (472)
25 2cjg_A L-lysine-epsilon aminot 99.9 1.3E-21 4.5E-26 192.9 14.6 172 4-197 261-441 (449)
26 4e77_A Glutamate-1-semialdehyd 99.9 3E-21 1E-25 187.8 14.8 178 5-197 231-422 (429)
27 3k28_A Glutamate-1-semialdehyd 99.9 2.4E-21 8.1E-26 188.8 13.5 179 4-197 230-420 (429)
28 2epj_A Glutamate-1-semialdehyd 99.9 4.8E-21 1.6E-25 186.6 15.1 179 4-197 233-424 (434)
29 3fq8_A Glutamate-1-semialdehyd 99.9 8.1E-21 2.8E-25 184.4 16.5 179 4-197 229-420 (427)
30 2e7u_A Glutamate-1-semialdehyd 99.8 8.7E-21 3E-25 184.3 15.2 178 5-197 229-420 (424)
31 1s0a_A Adenosylmethionine-8-am 99.8 5.8E-20 2E-24 178.4 16.8 174 5-197 236-417 (429)
32 2cy8_A D-phgat, D-phenylglycin 99.8 3.3E-20 1.1E-24 181.9 15.0 200 4-219 231-451 (453)
33 2eo5_A 419AA long hypothetical 99.8 4.1E-20 1.4E-24 179.7 12.2 163 5-197 243-411 (419)
34 1sff_A 4-aminobutyrate aminotr 99.8 8.4E-19 2.9E-23 169.0 17.3 180 5-197 230-417 (426)
35 4adb_A Succinylornithine trans 99.8 1E-18 3.5E-23 167.1 14.7 172 5-197 214-393 (406)
36 3ruy_A Ornithine aminotransfer 99.8 1.9E-18 6.3E-23 165.1 13.8 167 5-197 213-387 (392)
37 2ord_A Acoat, acetylornithine 99.7 3.6E-17 1.2E-21 156.7 13.7 169 5-197 214-390 (397)
38 1vef_A Acetylornithine/acetyl- 99.6 2.5E-15 8.6E-20 143.5 12.7 166 5-197 216-390 (395)
39 2eh6_A Acoat, acetylornithine 99.6 1.8E-14 6.1E-19 136.1 14.3 163 5-197 203-371 (375)
40 3l8a_A METC, putative aminotra 99.4 3.5E-13 1.2E-17 130.5 11.7 167 5-197 224-415 (421)
41 3kki_A CAI-1 autoinducer synth 99.3 6.3E-12 2.1E-16 120.8 11.1 163 5-197 213-397 (409)
42 1yiz_A Kynurenine aminotransfe 99.2 7.8E-11 2.7E-15 113.7 13.0 175 5-197 212-422 (429)
43 2w8t_A SPT, serine palmitoyltr 99.2 1.2E-10 4E-15 113.2 12.0 169 4-197 220-408 (427)
44 3tqx_A 2-amino-3-ketobutyrate 99.1 4.4E-10 1.5E-14 106.4 13.6 165 5-197 202-389 (399)
45 1fc4_A 2-amino-3-ketobutyrate 99.1 5.6E-10 1.9E-14 106.3 13.4 167 5-197 204-390 (401)
46 3ffh_A Histidinol-phosphate am 99.1 1.1E-09 3.8E-14 102.8 14.7 161 8-197 187-359 (363)
47 3dzz_A Putative pyridoxal 5'-p 99.0 1.5E-09 5E-14 102.5 12.9 169 5-197 190-382 (391)
48 4dq6_A Putative pyridoxal phos 99.0 1.2E-09 3.9E-14 103.2 11.7 168 5-197 194-386 (391)
49 3op7_A Aminotransferase class 99.0 1.5E-09 5.2E-14 102.4 12.3 170 5-197 184-364 (375)
50 3ftb_A Histidinol-phosphate am 99.0 3.5E-09 1.2E-13 99.0 14.5 165 6-197 175-354 (361)
51 2dou_A Probable N-succinyldiam 99.0 2.9E-09 9.8E-14 100.7 13.9 164 5-197 188-371 (376)
52 2zyj_A Alpha-aminodipate amino 99.0 7.3E-10 2.5E-14 105.7 9.8 168 5-197 193-386 (397)
53 3kax_A Aminotransferase, class 99.0 2E-09 7E-14 101.2 12.2 169 5-197 186-378 (383)
54 3h14_A Aminotransferase, class 99.0 1.9E-09 6.4E-14 102.5 11.9 169 5-197 191-375 (391)
55 1u08_A Hypothetical aminotrans 99.0 3E-09 1E-13 100.9 13.1 168 5-197 193-383 (386)
56 1vp4_A Aminotransferase, putat 99.0 1.2E-09 4E-14 105.8 9.9 171 5-197 218-411 (425)
57 3fdb_A Beta C-S lyase, putativ 99.0 2.2E-09 7.7E-14 100.9 11.6 167 5-197 180-369 (377)
58 2o0r_A RV0858C (N-succinyldiam 99.0 2.5E-09 8.5E-14 102.7 12.1 168 5-197 190-389 (411)
59 3ezs_A Aminotransferase ASPB; 99.0 2.3E-09 7.7E-14 101.0 10.7 163 5-197 184-368 (376)
60 3euc_A Histidinol-phosphate am 99.0 6.8E-09 2.3E-13 97.6 13.9 164 5-197 187-361 (367)
61 3b46_A Aminotransferase BNA3; 99.0 5.4E-09 1.8E-13 102.2 13.6 174 5-197 231-440 (447)
62 3f9t_A TDC, L-tyrosine decarbo 99.0 9.7E-09 3.3E-13 96.3 14.5 170 5-197 198-391 (397)
63 2zc0_A Alanine glyoxylate tran 98.9 2.6E-09 8.7E-14 101.9 10.3 168 5-197 205-397 (407)
64 3piu_A 1-aminocyclopropane-1-c 98.9 4.9E-09 1.7E-13 101.5 12.1 170 5-197 221-425 (435)
65 3e2y_A Kynurenine-oxoglutarate 98.9 1.2E-08 4E-13 97.2 14.5 179 5-197 197-406 (410)
66 1c7n_A Cystalysin; transferase 98.9 5.8E-09 2E-13 99.2 12.2 168 5-197 194-386 (399)
67 3nra_A Aspartate aminotransfer 98.9 8.6E-10 2.9E-14 104.8 6.4 167 5-197 209-398 (407)
68 1lc5_A COBD, L-threonine-O-3-p 98.9 1.5E-08 5.1E-13 95.5 14.6 165 5-197 176-353 (364)
69 3aow_A Putative uncharacterize 98.9 6.3E-09 2.2E-13 102.3 11.8 168 5-197 247-438 (448)
70 3cq5_A Histidinol-phosphate am 98.9 1.5E-08 5.3E-13 95.7 14.0 157 7-197 193-361 (369)
71 3fvs_A Kynurenine--oxoglutarat 98.9 1.3E-08 4.4E-13 97.5 13.4 179 5-197 204-415 (422)
72 1fg7_A Histidinol phosphate am 98.9 2.5E-08 8.4E-13 94.3 15.0 158 7-197 177-351 (356)
73 1d2f_A MALY protein; aminotran 98.9 1.1E-08 3.7E-13 97.2 12.5 167 5-197 192-382 (390)
74 2x5d_A Probable aminotransfera 98.9 6.7E-09 2.3E-13 99.7 11.1 168 5-197 202-391 (412)
75 2o1b_A Aminotransferase, class 98.9 9.3E-09 3.2E-13 98.9 12.1 165 5-197 211-396 (404)
76 3hdo_A Histidinol-phosphate am 98.9 2.1E-08 7.2E-13 94.3 13.8 160 6-197 177-348 (360)
77 2gb3_A Aspartate aminotransfer 98.9 8.5E-09 2.9E-13 99.0 11.1 164 5-197 204-395 (409)
78 2z61_A Probable aspartate amin 98.9 6.3E-09 2.2E-13 98.1 9.8 164 5-197 180-364 (370)
79 1cs1_A CGS, protein (cystathio 98.9 1.9E-08 6.4E-13 96.0 12.8 161 5-197 164-380 (386)
80 1v2d_A Glutamine aminotransfer 98.8 2.5E-08 8.6E-13 94.3 13.3 161 5-197 182-364 (381)
81 2dkj_A Serine hydroxymethyltra 98.8 1.2E-08 4E-13 97.0 10.5 170 5-197 188-381 (407)
82 1bs0_A Protein (8-amino-7-oxon 98.8 2E-08 6.9E-13 95.0 12.1 165 5-197 195-380 (384)
83 1gd9_A Aspartate aminotransfer 98.8 1.5E-08 5.2E-13 95.9 10.9 167 5-197 190-379 (389)
84 1elu_A L-cysteine/L-cystine C- 98.8 5.8E-08 2E-12 91.3 14.7 169 6-197 186-385 (390)
85 1iay_A ACC synthase 2, 1-amino 98.8 2.9E-08 9.9E-13 95.7 12.5 170 5-197 218-420 (428)
86 3b1d_A Betac-S lyase; HET: PLP 98.3 4.9E-10 1.7E-14 106.9 0.0 172 4-197 193-386 (392)
87 2vi8_A Serine hydroxymethyltra 98.8 1.7E-08 5.9E-13 95.8 10.6 169 5-197 188-380 (405)
88 3kgw_A Alanine-glyoxylate amin 98.8 3.6E-08 1.2E-12 92.6 12.5 172 5-197 175-381 (393)
89 1j32_A Aspartate aminotransfer 98.8 1.2E-08 4.1E-13 96.6 9.2 167 5-197 193-380 (388)
90 3a2b_A Serine palmitoyltransfe 98.8 3.5E-08 1.2E-12 93.9 12.2 166 5-197 200-385 (398)
91 3qgu_A LL-diaminopimelate amin 98.8 3.2E-08 1.1E-12 96.0 11.8 164 5-197 239-433 (449)
92 3f0h_A Aminotransferase; RER07 98.8 7.5E-08 2.6E-12 90.4 13.6 170 5-197 171-367 (376)
93 2x5f_A Aspartate_tyrosine_phen 98.8 6E-08 2.1E-12 93.5 13.2 169 7-197 226-422 (430)
94 3jtx_A Aminotransferase; NP_28 98.8 3.6E-08 1.2E-12 93.5 11.0 164 5-197 198-391 (396)
95 3ke3_A Putative serine-pyruvat 98.7 2.4E-08 8.4E-13 95.3 9.7 169 5-197 165-369 (379)
96 3dyd_A Tyrosine aminotransfera 98.7 1E-07 3.5E-12 92.4 14.1 171 5-197 221-417 (427)
97 1o4s_A Aspartate aminotransfer 98.7 3.8E-08 1.3E-12 93.8 10.4 164 5-197 204-382 (389)
98 3nnk_A Ureidoglycine-glyoxylat 98.7 1.7E-07 5.7E-12 88.9 14.6 173 5-197 165-383 (411)
99 3ly1_A Putative histidinol-pho 98.7 9.4E-08 3.2E-12 89.1 12.2 158 6-197 171-345 (354)
100 2r2n_A Kynurenine/alpha-aminoa 98.7 1.5E-07 5.2E-12 91.0 14.0 172 5-197 221-417 (425)
101 1xi9_A Putative transaminase; 98.7 4E-08 1.4E-12 94.0 9.3 167 5-197 204-396 (406)
102 3ez1_A Aminotransferase MOCR f 98.7 2.6E-07 8.9E-12 88.7 14.4 170 5-197 204-408 (423)
103 2bwn_A 5-aminolevulinate synth 98.7 1.7E-07 6E-12 89.1 12.9 167 5-197 205-393 (401)
104 1m32_A 2-aminoethylphosphonate 98.7 2.3E-07 7.8E-12 86.1 13.3 172 5-197 158-358 (366)
105 3get_A Histidinol-phosphate am 98.7 2.3E-07 8E-12 87.0 13.2 160 6-197 183-360 (365)
106 3d6k_A Putative aminotransfera 98.6 3.3E-07 1.1E-11 88.5 13.8 169 6-197 211-411 (422)
107 3g0t_A Putative aminotransfera 98.6 2E-07 7E-12 89.5 12.2 166 5-197 212-430 (437)
108 3ei9_A LL-diaminopimelate amin 98.6 3.1E-07 1.1E-11 88.6 13.5 164 5-197 228-421 (432)
109 3asa_A LL-diaminopimelate amin 98.6 2.4E-07 8.1E-12 88.6 12.5 165 5-197 193-386 (400)
110 3gbx_A Serine hydroxymethyltra 98.6 2.1E-07 7.1E-12 88.5 11.3 169 5-197 194-389 (420)
111 3g7q_A Valine-pyruvate aminotr 98.6 4.3E-07 1.5E-11 86.6 12.7 166 5-197 210-406 (417)
112 1kmj_A Selenocysteine lyase; p 98.6 8.3E-07 2.8E-11 83.6 14.3 169 5-197 191-398 (406)
113 3ele_A Amino transferase; RER0 98.6 1.7E-07 5.9E-12 88.9 9.6 167 7-197 210-389 (398)
114 1qz9_A Kynureninase; kynurenin 98.6 1.7E-07 5.9E-12 89.3 9.6 170 5-197 192-395 (416)
115 3mad_A Sphingosine-1-phosphate 98.5 3.5E-07 1.2E-11 91.0 11.3 175 5-197 266-462 (514)
116 3rq1_A Aminotransferase class 98.5 7E-07 2.4E-11 85.6 12.6 163 6-197 217-408 (418)
117 1uu1_A Histidinol-phosphate am 98.5 1.1E-06 3.7E-11 81.9 13.1 153 8-197 168-331 (335)
118 3h7f_A Serine hydroxymethyltra 98.5 4.1E-07 1.4E-11 89.0 10.5 176 5-197 210-407 (447)
119 3zrp_A Serine-pyruvate aminotr 98.5 1.3E-06 4.4E-11 81.7 13.5 172 5-197 154-356 (384)
120 1vjo_A Alanine--glyoxylate ami 98.5 1.3E-06 4.4E-11 82.6 13.5 171 5-197 186-388 (393)
121 2yrr_A Aminotransferase, class 98.5 5.3E-07 1.8E-11 83.2 10.6 171 5-197 151-346 (353)
122 3ppl_A Aspartate aminotransfer 98.5 1.1E-06 3.7E-11 84.8 13.1 170 5-197 212-413 (427)
123 1gc0_A Methionine gamma-lyase; 98.5 1.5E-06 5.3E-11 83.4 14.1 163 5-197 177-394 (398)
124 3if2_A Aminotransferase; YP_26 98.5 8.8E-07 3E-11 85.5 12.4 170 5-197 236-433 (444)
125 3t18_A Aminotransferase class 98.5 1.7E-06 5.7E-11 82.8 14.1 150 6-181 216-394 (413)
126 3fkd_A L-threonine-O-3-phospha 98.5 9.5E-07 3.2E-11 82.5 12.0 159 8-197 160-335 (350)
127 1bw0_A TAT, protein (tyrosine 98.5 8.6E-07 2.9E-11 84.7 11.9 174 5-197 207-406 (416)
128 2e7j_A SEP-tRNA:Cys-tRNA synth 98.5 9.8E-08 3.4E-12 89.3 5.1 166 5-197 174-363 (371)
129 2dr1_A PH1308 protein, 386AA l 98.5 2.3E-06 8E-11 80.1 14.5 173 5-197 173-372 (386)
130 1pff_A Methionine gamma-lyase; 98.5 1.4E-06 4.7E-11 80.7 12.4 163 7-197 113-327 (331)
131 3ecd_A Serine hydroxymethyltra 98.5 1.3E-06 4.3E-11 83.2 12.4 170 5-197 197-390 (425)
132 1ajs_A Aspartate aminotransfer 98.4 1.3E-07 4.3E-12 90.5 5.2 162 5-197 213-404 (412)
133 3qhx_A Cystathionine gamma-syn 98.4 7.5E-07 2.6E-11 85.9 10.4 136 5-166 178-341 (392)
134 2ay1_A Aroat, aromatic amino a 98.4 1.1E-07 3.8E-12 90.1 4.1 163 5-197 199-389 (394)
135 3dr4_A Putative perosamine syn 98.4 9.2E-07 3.2E-11 84.0 9.0 174 5-197 168-386 (391)
136 2rfv_A Methionine gamma-lyase; 98.4 8.8E-07 3E-11 84.9 8.6 168 5-197 176-393 (398)
137 3uwc_A Nucleotide-sugar aminot 98.3 1.6E-06 5.3E-11 81.4 9.5 173 5-197 149-364 (374)
138 1t3i_A Probable cysteine desul 98.3 9.7E-06 3.3E-10 76.8 15.0 172 5-197 196-406 (420)
139 3mc6_A Sphingosine-1-phosphate 98.3 2E-06 6.7E-11 84.8 10.5 175 5-197 233-430 (497)
140 3cai_A Possible aminotransfera 98.3 2.8E-06 9.6E-11 80.6 10.8 169 5-197 192-402 (406)
141 1iug_A Putative aspartate amin 98.3 4.1E-06 1.4E-10 77.4 11.6 166 8-197 153-341 (352)
142 2huf_A Alanine glyoxylate amin 98.3 7.8E-06 2.7E-10 77.0 13.4 172 5-197 171-376 (393)
143 3nmy_A Xometc, cystathionine g 98.3 1.5E-06 5.3E-11 84.5 8.8 116 5-136 179-321 (400)
144 2oga_A Transaminase; PLP-depen 98.3 2E-06 6.7E-11 82.3 9.3 172 5-197 175-389 (399)
145 2q7w_A Aspartate aminotransfer 98.3 2.2E-07 7.4E-12 88.0 2.3 163 6-197 203-392 (396)
146 1mdo_A ARNB aminotransferase; 98.3 3.1E-06 1.1E-10 79.9 10.1 176 5-197 151-379 (393)
147 2cb1_A O-acetyl homoserine sul 98.3 8.8E-06 3E-10 78.6 13.2 161 5-197 167-409 (412)
148 3e9k_A Kynureninase; kynurenin 98.2 6.3E-06 2.1E-10 80.5 11.7 169 5-197 241-454 (465)
149 2ch1_A 3-hydroxykynurenine tra 98.2 1.5E-05 5.2E-10 75.1 13.7 171 6-197 171-376 (396)
150 3isl_A Purine catabolism prote 98.2 1.6E-05 5.6E-10 75.2 14.0 174 5-197 163-383 (416)
151 1svv_A Threonine aldolase; str 98.2 9.7E-07 3.3E-11 81.7 4.9 161 5-197 174-351 (359)
152 2z9v_A Aspartate aminotransfer 98.1 2.3E-05 7.8E-10 73.7 13.4 173 5-197 161-364 (392)
153 2ctz_A O-acetyl-L-homoserine s 98.1 1E-05 3.5E-10 78.7 10.8 46 5-55 171-221 (421)
154 1ax4_A Tryptophanase; tryptoph 98.1 6.8E-06 2.3E-10 79.8 9.6 173 5-197 214-434 (467)
155 3acz_A Methionine gamma-lyase; 98.1 2E-05 6.9E-10 75.6 12.1 136 5-166 171-330 (389)
156 3ndn_A O-succinylhomoserine su 98.1 1.4E-05 4.7E-10 78.1 10.2 155 5-180 193-372 (414)
157 2ez2_A Beta-tyrosinase, tyrosi 98.1 1.9E-05 6.7E-10 76.4 11.2 175 5-197 205-424 (456)
158 1b5p_A Protein (aspartate amin 98.0 3.6E-05 1.2E-09 73.0 12.4 165 5-197 194-378 (385)
159 1wyu_B Glycine dehydrogenase s 98.0 2.9E-05 1E-09 76.6 11.9 172 5-197 230-434 (474)
160 1v72_A Aldolase; PLP-dependent 98.0 2.3E-05 8E-10 72.4 10.4 160 5-197 170-346 (356)
161 2qma_A Diaminobutyrate-pyruvat 98.0 2.7E-05 9.3E-10 77.1 11.1 176 5-197 285-489 (497)
162 3n0l_A Serine hydroxymethyltra 98.0 5.9E-05 2E-09 71.5 12.9 168 5-197 189-382 (417)
163 2fnu_A Aminotransferase; prote 98.0 1.8E-05 6E-10 73.9 8.9 175 5-197 145-365 (375)
164 3lvm_A Cysteine desulfurase; s 98.0 3.3E-05 1.1E-09 73.6 10.9 166 5-197 190-392 (423)
165 3frk_A QDTB; aminotransferase, 98.0 2.3E-05 8E-10 73.7 9.7 172 5-197 148-361 (373)
166 1w23_A Phosphoserine aminotran 98.0 0.00013 4.3E-09 67.8 14.3 163 6-197 164-353 (360)
167 1jg8_A L-ALLO-threonine aldola 98.0 4E-05 1.4E-09 71.0 10.7 165 5-197 163-339 (347)
168 3nyt_A Aminotransferase WBPE; 98.0 2.4E-05 8.3E-10 73.7 9.3 143 5-166 147-307 (367)
169 2oqx_A Tryptophanase; lyase, p 98.0 2.1E-05 7.2E-10 76.3 9.1 89 97-197 327-435 (467)
170 2po3_A 4-dehydrase; external a 97.9 3.5E-05 1.2E-09 74.1 10.5 173 5-197 162-379 (424)
171 3p1t_A Putative histidinol-pho 97.9 9.6E-05 3.3E-09 68.0 12.2 152 7-197 164-330 (337)
172 1eg5_A Aminotransferase; PLP-d 97.9 3.6E-05 1.2E-09 71.7 9.0 165 6-197 167-369 (384)
173 3ffr_A Phosphoserine aminotran 97.8 0.00036 1.2E-08 64.3 14.5 168 3-197 155-357 (362)
174 1e5e_A MGL, methionine gamma-l 97.8 0.00011 3.7E-09 71.0 10.6 51 7-63 177-234 (404)
175 3cog_A Cystathionine gamma-lya 97.7 0.00017 5.9E-09 69.7 11.7 53 5-63 178-238 (403)
176 2fyf_A PSAT, phosphoserine ami 97.7 0.00078 2.7E-08 64.0 15.9 167 7-197 191-391 (398)
177 1yaa_A Aspartate aminotransfer 97.7 1.2E-05 4.2E-10 76.7 3.2 160 5-197 206-404 (412)
178 1o69_A Aminotransferase; struc 97.7 0.00016 5.3E-09 69.0 10.4 157 5-167 146-331 (394)
179 2bkw_A Alanine-glyoxylate amin 97.7 0.0003 1E-08 65.6 12.0 167 8-197 169-377 (385)
180 1ibj_A CBL, cystathionine beta 97.7 5.5E-05 1.9E-09 75.1 6.8 51 5-63 244-303 (464)
181 4f4e_A Aromatic-amino-acid ami 97.6 3.5E-05 1.2E-09 74.0 4.2 168 5-197 225-415 (420)
182 3fsl_A Aromatic-amino-acid ami 97.6 4.5E-05 1.5E-09 72.0 4.6 168 5-197 203-393 (397)
183 3ht4_A Aluminum resistance pro 97.6 0.00031 1.1E-08 69.1 10.6 140 7-161 200-345 (431)
184 4eu1_A Mitochondrial aspartate 97.5 6.6E-05 2.3E-09 71.6 4.7 54 5-59 213-280 (409)
185 2x3l_A ORN/Lys/Arg decarboxyla 97.5 0.00018 6.1E-09 70.6 7.7 160 5-197 172-346 (446)
186 3bb8_A CDP-4-keto-6-deoxy-D-gl 97.5 0.00066 2.3E-08 65.6 11.3 176 5-197 182-429 (437)
187 2aeu_A Hypothetical protein MJ 97.5 0.00018 6.3E-09 68.5 7.3 175 5-197 169-364 (374)
188 3b8x_A WBDK, pyridoxamine 5-ph 97.5 0.00062 2.1E-08 64.4 10.9 144 5-166 152-334 (390)
189 1n8p_A Cystathionine gamma-lya 97.5 0.0004 1.4E-08 66.8 9.6 51 8-64 172-229 (393)
190 3pj0_A LMO0305 protein; struct 97.4 0.00052 1.8E-08 63.7 10.0 172 5-197 168-355 (359)
191 1b9h_A AHBA synthase, protein 97.4 0.00055 1.9E-08 64.5 10.2 145 5-167 150-322 (388)
192 3lws_A Aromatic amino acid bet 97.4 0.00072 2.5E-08 62.8 10.1 174 5-197 166-352 (357)
193 2jis_A Cysteine sulfinic acid 97.3 0.0014 4.8E-08 65.1 12.2 186 5-197 286-508 (515)
194 3f6t_A Aspartate aminotransfer 97.3 0.0011 3.6E-08 66.7 11.4 51 6-57 276-330 (533)
195 2okj_A Glutamate decarboxylase 97.3 0.001 3.5E-08 65.8 10.8 184 5-197 272-495 (504)
196 1qgn_A Protein (cystathionine 97.3 0.0011 3.7E-08 65.5 10.2 53 5-63 227-285 (445)
197 4hvk_A Probable cysteine desul 97.2 0.0032 1.1E-07 58.1 12.1 164 5-197 165-366 (382)
198 2c81_A Glutamine-2-deoxy-scyll 97.1 0.0031 1E-07 60.2 11.8 52 5-63 154-214 (418)
199 3a9z_A Selenocysteine lyase; P 97.1 0.0015 5E-08 62.4 9.5 159 9-197 216-421 (432)
200 4eb5_A Probable cysteine desul 97.1 0.0049 1.7E-07 57.2 12.1 162 5-197 165-366 (382)
201 3vax_A Putative uncharacterize 97.0 0.0014 4.9E-08 61.5 8.3 167 5-197 186-393 (400)
202 2z67_A O-phosphoseryl-tRNA(SEC 96.9 0.018 6E-07 56.2 14.9 167 5-197 258-451 (456)
203 3meb_A Aspartate aminotransfer 96.7 0.0012 4.2E-08 64.2 4.7 47 5-52 232-289 (448)
204 2c0r_A PSAT, phosphoserine ami 96.6 0.028 9.5E-07 52.1 13.3 168 7-197 166-354 (362)
205 3tcm_A Alanine aminotransferas 96.5 0.004 1.4E-07 61.8 7.4 178 5-197 267-487 (500)
206 3bwn_A AT1G70560, L-tryptophan 96.1 0.08 2.7E-06 50.3 13.6 153 8-197 185-380 (391)
207 7aat_A Aspartate aminotransfer 96.0 0.0049 1.7E-07 58.1 4.5 53 5-58 205-271 (401)
208 3ri6_A O-acetylhomoserine sulf 95.9 0.018 6.2E-07 56.4 8.3 46 5-54 194-242 (430)
209 3qm2_A Phosphoserine aminotran 95.9 0.06 2E-06 52.1 11.8 168 7-197 191-378 (386)
210 1rv3_A Serine hydroxymethyltra 95.9 0.043 1.5E-06 54.0 11.0 171 5-197 218-424 (483)
211 2a7v_A Serine hydroxymethyltra 95.9 0.036 1.2E-06 55.5 10.3 89 97-197 337-434 (490)
212 2zy4_A L-aspartate beta-decarb 95.9 0.028 9.7E-07 56.6 9.6 53 5-62 277-338 (546)
213 3e77_A Phosphoserine aminotran 95.1 0.13 4.6E-06 49.6 11.0 173 6-197 175-368 (377)
214 2fq6_A Cystathionine beta-lyas 95.0 0.077 2.6E-06 51.5 9.1 51 7-63 198-254 (415)
215 3k40_A Aromatic-L-amino-acid d 94.8 0.44 1.5E-05 46.8 13.9 179 5-197 261-464 (475)
216 3ihj_A Alanine aminotransferas 94.4 0.16 5.5E-06 50.2 9.9 176 5-197 265-486 (498)
217 3jzl_A Putative cystathionine 94.0 0.17 6E-06 49.1 9.1 138 7-161 194-339 (409)
218 1js3_A DDC;, DOPA decarboxylas 94.0 1.2 4.2E-05 43.1 15.2 178 5-197 262-467 (486)
219 4e1o_A HDC, histidine decarbox 93.9 0.63 2.2E-05 45.5 13.0 179 5-197 268-471 (481)
220 3vp6_A Glutamate decarboxylase 93.6 1 3.5E-05 44.6 14.0 186 5-197 275-498 (511)
221 3hbx_A GAD 1, glutamate decarb 93.6 1 3.5E-05 44.4 13.9 87 97-197 344-437 (502)
222 1c4k_A Protein (ornithine deca 93.4 0.79 2.7E-05 48.0 13.3 43 150-197 517-559 (730)
223 1wyu_A Glycine dehydrogenase ( 92.9 1 3.5E-05 43.0 12.4 84 97-197 346-433 (438)
224 2dgk_A GAD-beta, GADB, glutama 92.4 2.9 9.9E-05 40.0 14.8 176 7-197 222-427 (452)
225 2vyc_A Biodegradative arginine 91.8 1.9 6.5E-05 45.2 13.6 42 151-197 557-598 (755)
226 3m5u_A Phosphoserine aminotran 91.7 2.4 8.2E-05 40.3 13.1 166 7-197 163-353 (361)
227 3i16_A Aluminum resistance pro 91.4 1.2 4.2E-05 43.4 11.0 152 7-182 211-385 (427)
228 3hvy_A Cystathionine beta-lyas 90.6 1.8 6.2E-05 42.2 11.4 130 7-160 211-355 (427)
229 3ju7_A Putative PLP-dependent 90.4 0.64 2.2E-05 44.0 7.7 145 7-166 154-317 (377)
230 4h51_A Aspartate aminotransfer 84.8 0.8 2.7E-05 44.6 4.6 18 5-22 220-237 (420)
231 2hox_A ALLIIN lyase 1; cystein 84.3 9.8 0.00033 36.3 12.1 40 153-197 375-418 (427)
232 3hl2_A O-phosphoseryl-tRNA(SEC 81.7 3.8 0.00013 41.1 8.1 142 5-162 243-400 (501)
233 3k7y_A Aspartate aminotransfer 80.8 0.81 2.8E-05 44.1 2.9 57 5-62 204-274 (405)
234 3n75_A LDC, lysine decarboxyla 65.8 27 0.00093 36.4 10.1 43 150-197 511-553 (715)
235 3pk1_B Apoptosis regulator BAX 44.9 18 0.00063 22.9 2.8 30 282-311 3-32 (34)
236 2wh0_Q Pkcev3, protein kinase 43.6 11 0.00036 22.8 1.5 22 278-299 5-26 (31)
No 1
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=100.00 E-value=7.4e-41 Score=336.58 Aligned_cols=187 Identities=19% Similarity=0.246 Sum_probs=165.7
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
++-+||+|||+|||||||||||++|+++++||+|| ++|+|+||++|+||++++++||+.|... .....++.|++||
T Consensus 265 lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t~~K~l~gG~~Pl~av~~~~~i~~~~~~~-~~~~~~~~hg~T~ 343 (473)
T 4e3q_A 265 ILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAIISSKNLTAGFFPMGAVILGPELSKRLETA-IEAIEEFPHGFTA 343 (473)
T ss_dssp HHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEEECGGGGTTSSCCEEEEECHHHHHHHHHH-HHHHSCCCCCCTT
T ss_pred HhcccceEEeccCccccCCcccchhHHHhcCCCCChHHhcccccCCCCCcccccccHHHHHHhccc-cccccccccCCCC
Confidence 34578999999999999999999999999999999 6899999988999999999999988641 1122347899999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTH 152 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~ 152 (329)
+|| ++|++++++ +++++ +++++++|++|+++|+++. ++|.|.+|||.|+|++|+|..++.++.+++. ....+
T Consensus 344 ~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~-~~~~v~~vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~ 422 (473)
T 4e3q_A 344 SGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIA-ERPNIGEYRGIGFMWALEAVKDKASKTPFDGNLSVSER 422 (473)
T ss_dssp TTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHT-TSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHH
T ss_pred CCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHh-cCCCeeEEeecceEEEEEEecCccccccccccHHHHHH
Confidence 999 999999999 88876 8999999999999999986 4678999999999999999888777777753 36778
Q ss_pred HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.+.|+++||++++. +++++|+|||++ |++|||++++++
T Consensus 423 ~~~~~~~~Gll~~~~---g~~i~l~PPL~i---t~~eid~~~~~l 461 (473)
T 4e3q_A 423 IANTCTDLGLICRPL---GQSVVLCPPFIL---TEAQMDEMFDKL 461 (473)
T ss_dssp HHHHHHHTTEECEEE---TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHCCcEEEec---CCEEEEeCCCCC---CHHHHHHHHHHH
Confidence 999999999999986 589999999999 589999999985
No 2
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=100.00 E-value=1.3e-40 Score=333.33 Aligned_cols=181 Identities=18% Similarity=0.282 Sum_probs=162.4
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+.-+||+|||+|||||||||||++|++++|||+|| ++|+++||+ |+||+++++++|+.+.+ ..|++||
T Consensus 255 lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggg~-P~~av~~~~~i~~~~~~--------~~~~~Tf 325 (456)
T 4atq_A 255 WAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMAKGIAGGL-PLSAITGRADLLDAVHP--------GGLGGTY 325 (456)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTTS-SCEEEEEEHHHHTTSCT--------TSSCCSS
T ss_pred HHhhcCCceEecccccccCCccccccccccCCCCchhhhhhcccCcC-CceeeEecHHHHhcccc--------cCCCCCC
Confidence 34578999999999999999999999999999999 689999995 99999999999988763 6799999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhC-----CceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEF-----AIVGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~-----p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
+|| ++|++++++ +++++ +++++++|++|+++|+++++++ +.|.+|||+|+|+||+|..+. .+.| +.+.
T Consensus 326 ~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~-~~~~-~~~~ 403 (456)
T 4atq_A 326 GGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPG-SKEP-NAEL 403 (456)
T ss_dssp SSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTT-SCCB-CHHH
T ss_pred CCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCC-CCCc-CHHH
Confidence 999 999999999 98876 8999999999999999999885 569999999999999998643 2333 3567
Q ss_pred HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..++...|+++||++.++|..+|+|+|.|||++ |++|||++++++
T Consensus 404 ~~~v~~~~~~~Gvl~~~~g~~~~~irl~PpL~i---t~~~id~~l~~l 448 (456)
T 4atq_A 404 TKAVAAACLKEGVIILTCGTYGNVIRLLPPLVI---SDELLIDGLEVL 448 (456)
T ss_dssp HHHHHHHHHHTTEECEEECTTSCEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEecCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence 888999999999999999888999999999999 589999999986
No 3
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.98 E-value=1.6e-32 Score=274.94 Aligned_cols=179 Identities=12% Similarity=-0.010 Sum_probs=151.0
Q ss_pred ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
++-+||+|||+||||| ||||.+|+++++||+|| ++|+||||+ |+||++++++||+.+.+ . ...+.|++||
T Consensus 249 lc~~~g~lLI~DEV~t--GR~G~~~a~e~~gv~PDi~t~gK~lggG~-Piga~~~~~ei~~~~~~---~-~~~~~h~~T~ 321 (454)
T 4ao9_A 249 SATQVGALLVFDEVMT--SRLAPHGLANKLGIRSDLTTLGKYIGGGM-SFGAFGGRADVMALFDP---R-TGPLAHSGTF 321 (454)
T ss_dssp HHHHHTCEEEEECTTG--GGGSTTCHHHHHTCCCSEEEEEGGGGTTS-SCEEEEECHHHHGGGCT---T-TCSCCCCCTT
T ss_pred HHhhcCCEEEEECCCc--CCCccccchhccCCCCcEEEeccccCCCC-cceeeeeHHHHHHHHhh---c-cCCccccCCC
Confidence 4567899999999999 49999999999999999 689999995 99999999999998863 1 1246899999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC----CCCChHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK----VPLNSRHM 150 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~----~p~~~~~~ 150 (329)
++| ++|++++++ +++++ +++++++|++|+++|+++.++++.+.+|||.|+|++++|++++... ...+....
T Consensus 322 ~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~ 401 (454)
T 4ao9_A 322 NNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLR 401 (454)
T ss_dssp TTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHH
Confidence 999 999999999 88865 8999999999999999999999999999999999999997643211 01134567
Q ss_pred HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+...|+++||++.|.+ + +.|++. ||++|||++++++
T Consensus 402 ~~~~~~ll~~Gv~~~p~~---~---~~~s~~---~T~~dId~~l~al 439 (454)
T 4ao9_A 402 QLLFFHLLNEDIYSSPRG---F---VVLSLP---LTDADIDRYVAAI 439 (454)
T ss_dssp HHHHHHHHHTTEECCTTC---E---EECCTT---CCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEcCCC---C---EEEeCC---CCHHHHHHHHHHH
Confidence 788999999999998754 2 344544 4799999999985
No 4
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.97 E-value=1.2e-31 Score=285.80 Aligned_cols=185 Identities=16% Similarity=0.074 Sum_probs=151.3
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.-+||++||+|||||||||||++|+++++||+|| ++|+|+|||+|+|+++++++|++.|.. ......+.|++||+
T Consensus 625 c~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDiitlsK~L~gG~~Plgav~~~~~i~~~~~~--~~~~~~~~hg~T~~ 702 (831)
T 4a0g_A 625 CRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIACFAKLLTGGMVPLAVTLATDAVFDSFSG--DSKLKALLHGHSYS 702 (831)
T ss_dssp HHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEEEECGGGGTTSSCCEEEEECHHHHHTTCS--SCGGGSCCCCCTTT
T ss_pred HHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEEEEecccccCccCcEEEEECHHHHHHHhc--ccccccceeecCCc
Confidence 4568999999999999999999999999999999 689999998899999999999998863 11112467999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHH----HHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLT----HLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~----gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
+| ++|++++++ +++++ .+++.++++++++ .+.+...++|.+.+|||.|+|++|++..+.. +.+++...+.
T Consensus 703 g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~-~~~~~~~~a~ 781 (831)
T 4a0g_A 703 AHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGTLFALELKADAS-NSGYASLYAK 781 (831)
T ss_dssp TCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEETTEEEEEEC----------CHHHH
T ss_pred ccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeecccEEEEEEecCcc-ccccchHHHH
Confidence 99 999999999 88765 5677777776643 4555556799999999999999999975432 2233345677
Q ss_pred HHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.+.|+++||++.+. +++|||+||+++ |++|||++++++
T Consensus 782 ~~~~~l~e~Gv~v~p~---g~~lrl~pp~~~---t~e~id~~~~~l 821 (831)
T 4a0g_A 782 SLLIMLREDGIFTRPL---GNVIYLMCGPCT---SPEICRRLLTKL 821 (831)
T ss_dssp HHHHHHHHTTEECCCB---TTEEEEECCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHCCcEEEec---CCEEEEECCCCC---CHHHHHHHHHHH
Confidence 8999999999999975 589999999998 589999999985
No 5
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.96 E-value=9.5e-30 Score=253.87 Aligned_cols=181 Identities=17% Similarity=0.210 Sum_probs=156.6
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||+|||||+|.+|+++++|+.|| ++|+|+||++|+|++++++++++.+.. ..+.|++||+
T Consensus 253 ~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t~sK~l~gg~~plG~v~~~~~i~~~~~~------~~~~~~~t~~ 326 (472)
T 3hmu_A 253 CDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMTIAKGLSSGYAPIGGSIVCDEVAHVIGK------DEFNHGYTYS 326 (472)
T ss_dssp HHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSSCCEEEEEEHHHHHHHTT------SCBCCCCTTT
T ss_pred HHHcCCEEEEEccccCCcccCccchhHHhCCCCceeeechhhhcCCcceEEEEECHHHHHhccc------CCccccCCCC
Confidence 3468999999999999999999999999999999 679999998899999999999998831 1368999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHH-HHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC---hHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTY-VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN---SRHMT 151 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~-~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~---~~~~~ 151 (329)
+| ++|++++++ +++++ +++++ +++++++++|+++. ++|.+.++||.|+|+++++..+...+.+++ .....
T Consensus 327 ~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~-~~~~v~~vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~ 405 (472)
T 3hmu_A 327 GHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALT-DHPLVGEAKIVGMMASIALTPNKASRAKFASEPGTIGY 405 (472)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGG-GSTTEEEEEEETTEEEEEECSCGGGTCCBSSCTTHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh-cCCCeEEEEecCceEEEEEecCccccccccchhHHHHH
Confidence 99 999999998 87754 88999 99999999998874 589999999999999999975543333432 23567
Q ss_pred HHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.+.|+++||++.++| +++||.||+++ |++||+++++++
T Consensus 406 ~~~~~l~~~Gv~v~~~g---~~iRi~p~~~~---t~e~i~~~l~~l 445 (472)
T 3hmu_A 406 ICRERCFANNLIMRHVG---DRMIISPPLVI---TPAEIDEMFVRI 445 (472)
T ss_dssp HHHHHHHHTTBCCEEET---TEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHCCcEEEecC---CEEEEECCCCC---CHHHHHHHHHHH
Confidence 78999999999999864 89999999999 589999999986
No 6
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.96 E-value=8.4e-30 Score=254.29 Aligned_cols=198 Identities=14% Similarity=0.125 Sum_probs=160.1
Q ss_pred cccccceEEehhHhhchhccchhhhhc-ccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQ-CLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e-~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
..+||++||+|||+|||||||.+|+++ ++|+.|| ++|+|+|||+|+|++++++++++.+... ......+.|++||
T Consensus 251 c~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t~sK~l~~G~~plg~v~~~~~i~~~~~~~-~~~~~~~~~~~t~ 329 (476)
T 3i5t_A 251 CEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFAKGVTSGYVPLGGLAISEAVLARISGE-NAKGSWFTNGYTY 329 (476)
T ss_dssp HHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEEECGGGGTTSSCCEEEEECHHHHHTTSGG-GCTTCEECCCCTT
T ss_pred HHHcCCEEEEEecccCCccccCceeeecccCCCcchhhhhhhhcCCCcCeEEEEECHHHHHHHhcC-CcccccccccCCC
Confidence 346899999999999999999999999 9999999 6799999977999999999999987631 0011235799999
Q ss_pred hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTH 152 (329)
Q Consensus 80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~ 152 (329)
++| ++|++++++ +++++ ++++++++++++++|+++. ++|.+.++||.|+|+++++..+..++.+++. .....
T Consensus 330 ~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~-~~~~v~~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~ 408 (476)
T 3i5t_A 330 SNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLR-DLPGVAETRSVGLVGCVQCLLDPTRADGTAEDKAFTLK 408 (476)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTT-TSTTEEEEEEETTEEEEEECCC-----CCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh-cCCCeEEEEecCceeEEEEecCccccccccchhHHHHH
Confidence 999 999999998 87754 8899999999999999764 7899999999999999999765443444422 24667
Q ss_pred HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhccccchhhhhhhhhh
Q psy7882 153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQSYAGSIN 210 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~~~~~~~~~~~~~~ 210 (329)
+...|+++||++.++| +++||.||+++ +++||+++++++. ....++....+
T Consensus 409 ~~~~l~~~Gv~v~~~g---~~iRi~p~l~~---t~e~i~~~l~~l~-~~l~~~~~~~~ 459 (476)
T 3i5t_A 409 IDERCFELGLIVRPLG---DLCVISPPLII---SRAQIDEMVAIMR-QAITEVSAAHG 459 (476)
T ss_dssp HHHHHHHTTEECEEET---TEEEECCCTTC---CHHHHHHHHHHHH-HHHHHHHHHTT
T ss_pred HHHHHHHCCCEEEecC---CEEEEECCCCC---CHHHHHHHHHHHH-HHHHHHHHHhC
Confidence 8899999999999864 89999999999 5899999999862 34444444433
No 7
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.95 E-value=1.6e-27 Score=235.33 Aligned_cols=189 Identities=18% Similarity=0.215 Sum_probs=160.0
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||+|||||+|.+|+++++|+.|| ++|+|+||++|+|++++++++++.+... ......+.|++||+
T Consensus 251 ~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~l~gG~~~lg~v~~~~~i~~~~~~~-~~~~~~~~~~~t~~ 329 (460)
T 3gju_A 251 LKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLITIAKGLTSAYAPLSGVIVADRVWQVLVQG-SDKLGSLGHGWTYS 329 (460)
T ss_dssp HHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSSCCEEEEEEHHHHHHHHHH-HHHHCSCSCCCTTT
T ss_pred HHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeeeehhhcCCCCCeEEEEECHHHHHHHhcc-cccccccccCCCCC
Confidence 3468999999999999999999999999999999 6799999978999999999999988520 00012368999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTHI 153 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~~ 153 (329)
+| ++|+++++. +.+++ ++++++++++++++|++...++|.+..+||.|+|+++++..+...+.++.. .....+
T Consensus 330 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (460)
T 3gju_A 330 AHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEVRGDGMLAAVEFVADKDDRVFFDASQKIGPQV 409 (460)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeeEEEEEEEccCccccccccchHHHHHHH
Confidence 99 999999988 77654 889999999999999888888999999999999999999765443344422 346778
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.|+++||++.+++ .++.+||.||+++ |++||+++++++
T Consensus 410 ~~~l~~~Gv~v~~~~-~~~~iRi~~~~~~---t~e~i~~~l~~l 449 (460)
T 3gju_A 410 ATALAASGVIGRAMP-QGDILGFAPPLCL---TREQADIVVSKT 449 (460)
T ss_dssp HHHHHHTTEECEECS-SSCEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHCCeEEecCC-CCCEEEEECCCCC---CHHHHHHHHHHH
Confidence 999999999999876 4589999999998 589999999985
No 8
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.95 E-value=1.9e-27 Score=234.69 Aligned_cols=183 Identities=19% Similarity=0.212 Sum_probs=156.5
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||+|||||+|.+|+++++++.|| ++|+|+||++|+|++++++++++.+.. . ..+.|++||+
T Consensus 249 ~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t~sK~l~gg~~~lg~v~~~~~i~~~~~~--~---~~~~~~~t~~ 323 (459)
T 4a6r_A 249 CRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTAAKGLSSGYLPIGAVFVGKRVAEGLIA--G---GDFNHGFTYS 323 (459)
T ss_dssp HHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSSCCEEEEECHHHHHHHHH--H---CTTHHHHHHC
T ss_pred HHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeehhhhhcCCCCCccceeeCHHHHHHhhc--C---CCcccCCCCC
Confidence 3468999999999999999999999999999999 679999998899999999999998863 1 1367899999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHH-HHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC--hHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTY-VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN--SRHMTH 152 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~-~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~--~~~~~~ 152 (329)
+| ++|+++++. +.+++ +++++ ++++++++.|.+...++|.+.++||.|+|+++++..+...+.+|. ......
T Consensus 324 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (459)
T 4a6r_A 324 GHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVGMVQAFTLVKNKAKRELFPDFGEIGTL 403 (459)
T ss_dssp SCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECSBTTTTBCCSSTTHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEecCccccccccchHHHHHH
Confidence 99 999999998 77654 88999 999999999944446789999999999999999976544444442 235677
Q ss_pred HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.+.|+++||++.++| +.+||.||+++ |++|++++++++
T Consensus 404 ~~~~l~~~Gv~v~~~g---~~iRi~~~~~~---t~e~i~~~l~~l 442 (459)
T 4a6r_A 404 CRDIFFRNNLIMRACG---DHIVSAPPLVM---TRAEVDEMLAVA 442 (459)
T ss_dssp HHHHHHHTTEECEEET---TEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHCCeEEecCC---CEEEEECCCCC---CHHHHHHHHHHH
Confidence 8899999999999864 89999999998 589999999985
No 9
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.95 E-value=3.9e-27 Score=231.15 Aligned_cols=189 Identities=24% Similarity=0.410 Sum_probs=160.0
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||+|||||+|.+|+++++++.|| ++|++++|++|+|++++++++++.+.. ......+.|++||+
T Consensus 245 ~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~~ig~~~~~~~i~~~~~~--~~~~~~~~~~~t~~ 322 (452)
T 3n5m_A 245 CQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIITMAKGITSAYLPLSATAVKREIYEAFKG--KGEYEFFRHINTFG 322 (452)
T ss_dssp HHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTTSSCCEEEEEEHHHHGGGCS--SSTTCSCCCCCSST
T ss_pred HHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEeecccccCCCcceEEEEECHHHHHHHhh--ccCCCCccccCCCC
Confidence 3468999999999999999999999999999999 689999997799999999999988742 00112467999999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|+++++. +.+++ ++++++++++++++|+++..++|.+..++|.|+|+++++..+.....+++......+.+
T Consensus 323 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 402 (452)
T 3n5m_A 323 GNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRGKGLLVGIELVNDKETKEPIDNDKIASVVN 402 (452)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSSCEEEEEEEETTTTEECCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEecCCcccCCCCHHHHHHHHH
Confidence 99 999999988 76654 88999999999999999988899999999999999999975443334444455667899
Q ss_pred HHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+++. .++.+||.||+++ |++||+++++++
T Consensus 403 ~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~---t~e~i~~~l~~l 445 (452)
T 3n5m_A 403 ACKEKGLIIGRNGMTTAGYNNILTLAPPLVI---SSEEIAFVIGTL 445 (452)
T ss_dssp HHHHTTEECEECTTSSTTCCCEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHHCCcEEeecCcccCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence 99999999998652 2689999999998 589999999975
No 10
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.94 E-value=7.3e-27 Score=231.90 Aligned_cols=174 Identities=14% Similarity=0.093 Sum_probs=151.4
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
.+||++||+|||+|||||+|.+|+++++|+.|| ++|+|+||++|+|++++++++++.+.. .....+.|++||++
T Consensus 265 ~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdiit~sK~l~gG~~~lG~v~~~~~i~~~~~~---~~~~~~~~~~t~~~ 341 (457)
T 3tfu_A 265 RRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALTGGYLSLAATLCTADVAHTISA---GAAGALMHGPTFMA 341 (457)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHHH---SSSCSCCCCCTTTT
T ss_pred HHcCCEEEEEcCccCCccccchhHhHhcCCCceEEEEChhhhCCCcceEEEEEcHHHHHHhhc---cCCCceeEecCCCc
Confidence 467999999999999999999999999999999 689999998899999999999998852 11123589999999
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
| ++|++++++ +++++ .+++++++++++++|+++. +++.+.++|+.|+|+++++..+. + ...+.+.
T Consensus 342 n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~-~~~~v~~vr~~G~~~~i~l~~~~------~---~~~~~~~ 411 (457)
T 3tfu_A 342 NPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTAR-ALPAVTDVRVCGAIGVIECDRPV------D---LAVATPA 411 (457)
T ss_dssp CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGG-GSTTEEEEEECSSCEEEEESSCC------C---HHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-cCCCeeeeecCCeEEEEEECCcc------c---HHHHHHH
Confidence 9 999999998 77754 7899999999999999986 68889999999999999996421 1 4568899
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|+++||++.+. ++.+||.||+++ |++|++++++++
T Consensus 412 l~~~Gv~v~~~---~~~lRi~p~~~~---t~eei~~~l~~L 446 (457)
T 3tfu_A 412 ALDRGVWLRPF---RNLVYAMPPYIC---TPAEITQITSAM 446 (457)
T ss_dssp HHHTTEECCCB---TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHCCeEEEec---CCEEEEECCCCC---CHHHHHHHHHHH
Confidence 99999999875 589999999998 589999999985
No 11
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.94 E-value=1.5e-26 Score=228.81 Aligned_cols=180 Identities=18% Similarity=0.242 Sum_probs=156.9
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||+|||||+|.+|+++++|+.|| ++|++++| +|+|++++++++++.+.+ ..|++||+
T Consensus 255 ~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK~~~~G-~~~G~~~~~~~i~~~~~~--------~~~~~t~~ 325 (453)
T 4ffc_A 255 ASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMAKGIAGG-MPLSAVTGRAELMDAVYA--------GGLGGTYG 325 (453)
T ss_dssp HHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTT-SSCEEEEEEHHHHTTSCT--------TSSCCSSS
T ss_pred HHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhhhhhcCC-cCeEEEEECHHHHhhhcc--------cCcCCCCC
Confidence 3468999999999999999999999999999999 67999999 599999999999987653 56899999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|+++++. +.+++ ++++++++++++++|+++..++|.+..++|.|+|++++|.. ...+.| +......+.+
T Consensus 326 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~-~~~~~~~~~~ 403 (453)
T 4ffc_A 326 GNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEVRGRGAMLAIEIVK-PGTLEP-DAALTKSIAA 403 (453)
T ss_dssp SCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEEETTEEEEEEBC-TTSCCB-CHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeeceEEEEEEec-CcccCC-CHHHHHHHHH
Confidence 99 999999988 76654 78999999999999999999999999999999999999964 222222 2345677899
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+++..++.+||.||+++ +++||+++++++
T Consensus 404 ~l~~~Gv~v~~~~~~~~~iRi~~~~~~---t~e~i~~~l~~l 442 (453)
T 4ffc_A 404 EALSQGVLILTCGTFGNVIRLLPPLVI---GDDLLDEGITAL 442 (453)
T ss_dssp HHHHTTEECCEECTTSCEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHhCCCEEecCCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence 999999999998766799999999998 589999999985
No 12
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.94 E-value=2.2e-26 Score=227.18 Aligned_cols=180 Identities=18% Similarity=0.225 Sum_probs=156.9
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||+|||||+|.+|+++++|+.|| ++|++++| +|+|++++++++++.+.+ ..|++||+
T Consensus 257 ~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G-~~iG~v~~~~~~~~~~~~--------~~~~~t~~ 327 (451)
T 3oks_A 257 CRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVTAKGIAGG-LPLSAVTGRAEIMDSPHV--------SGLGGTYG 327 (451)
T ss_dssp HHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTT-SSCEEEEEEHHHHTCSCT--------TSBCCSSS
T ss_pred HHHcCCEEEEEecccCCCccccchhhhhcCCCCCeeeehhhhhCC-cceEEEEECHHHHhhhcC--------CCcCCCCC
Confidence 4568999999999999999999999999999999 67999999 599999999999987653 56899999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|+++++. +.+++ ++++++++++++++|+++..++|.+..++|.|+|+++++.. ...+.| +......+.+
T Consensus 328 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~-~~~~~~~~~~ 405 (451)
T 3oks_A 328 GNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDVRGRGAMIAMELVK-AGTTEP-DADLTKALCA 405 (451)
T ss_dssp SCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEBS-TTSCCB-CHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEeeEEEEEEEec-CccCCC-CHHHHHHHHH
Confidence 99 999999988 76654 88999999999999999998999999999999999999964 222222 2345677899
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+++..++.+||.||+++ +++||+++++++
T Consensus 406 ~l~~~Gv~v~~~~~~~~~iRi~~~~~~---t~e~i~~~l~~l 444 (451)
T 3oks_A 406 GAHAAGVIVLSCGTYGNVVRFLPPLSI---GDDLLNEGLDVL 444 (451)
T ss_dssp HHHHTTEECEEECTTSCEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHhCCcEEecCCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence 999999999998766799999999998 589999999985
No 13
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.94 E-value=4.7e-26 Score=223.84 Aligned_cols=186 Identities=21% Similarity=0.238 Sum_probs=155.7
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||+|||||+|.+|+++++|+.|| ++|++++|++|+|++++++++++.+... ......+.|++||+
T Consensus 241 ~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t~sK~l~~G~~~ig~v~~~~~~~~~~~~~-~~~~~~~~~~~t~~ 319 (448)
T 3dod_A 241 CTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIAVTFATEDIYKAFYDD-YENLKTFFHGHSYT 319 (448)
T ss_dssp HHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHTTCSC-GGGCCCCCCCCTTT
T ss_pred HHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEEecccccCCcCceEEEEECHHHHHHhhhc-cccCCcccccCCCC
Confidence 3468999999999999999999999999999999 6799999967999999999999887520 00112367899999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH--HHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR--HMTHI 153 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~--~~~~~ 153 (329)
+| ++|+++++. +.+++ ++++++++++++++|++ ...+|.+..++|.|+|+++++..+.....+++.. ....+
T Consensus 320 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~-l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (448)
T 3dod_A 320 GNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQD-LHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKV 398 (448)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH-HTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHH
T ss_pred cCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH-HhcCCCeEEEEeeeEEEEEEEccCcccccccchhhHHHHHH
Confidence 99 999999988 77654 78999999999999999 6778989999999999999997654333344322 24678
Q ss_pred HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.|+++||++.+. ++.+||.||+++ |++||+++++++
T Consensus 399 ~~~l~~~Gv~~~~~---~~~iRi~~~~~~---t~e~i~~~l~~l 436 (448)
T 3dod_A 399 SLKMRELGMLTRPL---GDVIAFLPPLAS---TAEELSEMVAIM 436 (448)
T ss_dssp HHHHHHTTEECCEE---TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHCCcEEecc---CCEEEEECCCCC---CHHHHHHHHHHH
Confidence 89999999999885 489999999998 589999999985
No 14
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.92 E-value=1.4e-24 Score=213.20 Aligned_cols=173 Identities=19% Similarity=0.220 Sum_probs=148.9
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+||||+||||+|.+++++++|+.|| ++|+++||++|+|++++++++++.+.. ..|++||+
T Consensus 242 ~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~--------~~~~~t~~ 313 (433)
T 1z7d_A 242 CKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKP--------GEHGSTYG 313 (433)
T ss_dssp HHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTCCT--------TCCCCTTT
T ss_pred HHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEEEECccccCCCCCeEEEEECHHHHhhhcc--------ccccccCC
Confidence 3467999999999999999999999999999999 679999996699999999999876642 46889999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|+++++. +.+++ .+++++++++|+++|+++...++.+..++|.|+|+++++..+.. ....+.+
T Consensus 314 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~~--------~~~~~~~ 385 (433)
T 1z7d_A 314 GNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNELV--------NVLDICL 385 (433)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTTC--------CHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccChh--------HHHHHHH
Confidence 99 999998888 76654 78999999999999999876788888999999999999964210 1346888
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|+++||++.+++ ++.+|+.||+++ +++||+++++++
T Consensus 386 ~l~~~Gv~v~~~~--~~~iRi~~~~~~---t~e~i~~~l~~l 422 (433)
T 1z7d_A 386 KLKENGLITRDVH--DKTIRLTPPLCI---TKEQLDECTEII 422 (433)
T ss_dssp HHHHTTEECCEET--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHHCCeEEecCC--CCEEEEECCcCC---CHHHHHHHHHHH
Confidence 9999999998863 689999999988 589999999985
No 15
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.91 E-value=3.1e-24 Score=208.63 Aligned_cols=185 Identities=19% Similarity=0.171 Sum_probs=148.9
Q ss_pred ccccceEEehhHhhchhccchhhhhccc-CCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCL-QICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~-GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.+||++||+|||++||||+|.+++++++ ++.|| ++|++++||+|+|++++++++++.+.. . ..++.|++||+
T Consensus 222 ~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~l~~G~~r~G~~~~~~~i~~~~~~--~--~~~~~~~~t~~ 297 (430)
T 3i4j_A 222 DEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKGLAAGYAPLAGLLAAPQVYETVMG--G--SGAFMHGFTYA 297 (430)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGGGTTTSSCCEEEEECHHHHHHHHH--T--TCBCCCCCTTT
T ss_pred HHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEcccccCCccccEEEEECHHHHHHHhc--c--CCcccccCCCC
Confidence 4679999999999999999999999999 99999 679999997799999999999998864 1 11357899999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC-hHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN-SRHMTHIL 154 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~-~~~~~~~~ 154 (329)
+| ++|+++++. +.+++ +++++++++++++.|+++..++|.+..+++.|+|+++++. +.....+++ ......+.
T Consensus 298 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 376 (430)
T 3i4j_A 298 GHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQVRGTGLLLGVVLG-DLATGQAFETPGIASRIG 376 (430)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEC-------------CHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEec-cccccCCCccHHHHHHHH
Confidence 99 999999887 66544 7899999999999999998889999999999999999996 322222221 12246788
Q ss_pred HHHHHCCceeecc-----CCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRG-----GLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~-----G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.|+++||++.++ +..++.+|+.||+++ +++|++++++++
T Consensus 377 ~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~---t~e~i~~~l~~l 421 (430)
T 3i4j_A 377 AAALKRGLITYPGSGAEPNGRGDHLLLGPPLSI---TAAEVDGLLALL 421 (430)
T ss_dssp HHHHHTTEECC-----------CEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHHhCCCEEEecccccCCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence 9999999999886 224689999999998 589999999985
No 16
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.91 E-value=5.8e-24 Score=209.36 Aligned_cols=171 Identities=18% Similarity=0.215 Sum_probs=145.8
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
.+||++||+|||||||||+|.+|+++++|+.|| ++|+++||++|+|++++++++++.+.. ..|++||++
T Consensus 254 ~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~--------~~~~~t~~~ 325 (439)
T 2oat_A 254 TRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKP--------GEHGSTYGG 325 (439)
T ss_dssp HHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTSCT--------TSSCCSSTT
T ss_pred HHcCCEEEEeccccCCccCCcchhHHHhCCCCcEEEecccccCCCCCeEEEEECHHHHhccCC--------CCcccCCCc
Confidence 468999999999999999999999999999999 579999996699999999999876642 468899999
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
| ++|+++++. +.+++ .+++++++++|+++|+++ .++.+.+++|.|+|+++++..+.. . ....+.+.
T Consensus 326 ~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l--~~~~~~~~~~~g~~~~v~l~~~~~----~---~~~~l~~~ 396 (439)
T 2oat_A 326 NPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKL--PSDVVTAVRGKGLLNAIVIKETKD----W---DAWKVCLR 396 (439)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTS--CTTTEEEEEEETTEEEEEECCCSS----C---CHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh--cCCCcEEEEeeeeEEEEEEecCcc----H---HHHHHHHH
Confidence 9 999998888 76654 789999999999999887 477778899999999999964210 0 13468889
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|+++||++.+.+ ++.+|+.||+++ +++|++++++++
T Consensus 397 l~~~Gv~v~~~~--~~~iRi~~~~~~---t~e~i~~~l~~l 432 (439)
T 2oat_A 397 LRDNGLLAKPTH--GDIIRFAPPLVI---KEDELRESIEII 432 (439)
T ss_dssp HHHTTEECCBSS--SSEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHCCeEEecCC--CCEEEEECccCC---CHHHHHHHHHHH
Confidence 999999998853 689999999987 589999999985
No 17
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.89 E-value=1.7e-22 Score=196.78 Aligned_cols=179 Identities=21% Similarity=0.271 Sum_probs=152.5
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
.+||++||+|||++||||+|.+++++++++.|| ++|++++|+ |+|++++++++++.+.. ..|++|| +
T Consensus 232 ~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~s~sK~~~~G~-riG~~~~~~~~~~~~~~--------~~~~~t~-~ 301 (439)
T 3dxv_A 232 RAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDILVLGKGLGGGL-PLSAVIAPAEILDCASA--------FAMQTLH-G 301 (439)
T ss_dssp HHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEEEECGGGGTTS-CCEEEEEEHHHHTSCSS--------SSCCTTT-T
T ss_pred HHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEEEEcchhcCCc-ceEEEEECHHHHhhhcC--------CCcCCCc-c
Confidence 467999999999999999999999999999999 679999996 99999999999876653 4688999 8
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
+ ++++++++. +.+++ +++++++++++++.|+++...++.+..+++.|+|+++++..+.....| +......+.+.
T Consensus 302 ~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 380 (439)
T 3dxv_A 302 NPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELVCDRQSREP-ARAETAKLIYR 380 (439)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEE-CHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCC-CHHHHHHHHHH
Confidence 8 999988887 65543 789999999999999999888999999999999999999654322222 22346678899
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|+++||++.+++..++.+|+.||+++ +++|++++++++
T Consensus 381 l~~~Gv~v~~~~~~~~~iRi~~~~~~---t~e~i~~~l~~l 418 (439)
T 3dxv_A 381 AYQLGLVVYYVGMNGNVLEFTPPLTI---TETDIHKALDLL 418 (439)
T ss_dssp HHHHTEECEEESTTSCEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHCCcEEeecCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence 99999999998756699999999988 589999999985
No 18
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.89 E-value=2e-22 Score=195.67 Aligned_cols=182 Identities=23% Similarity=0.289 Sum_probs=150.0
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
.+||++||+|||++||||+|.+++++++++.|| ++|++++| +|+|++++++++++.+.. . ...|++||++
T Consensus 234 ~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~sK~~~~G-~~ig~~~~~~~~~~~~~~---~---~~~~~~t~~~ 306 (433)
T 1zod_A 234 EARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLGAG-LPLAAIVTSAAIEERAHE---L---GYLFYTTHVS 306 (433)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHHTT-SSCEEEEECHHHHHHHHH---T---TCCCCCTTTT
T ss_pred HHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEecccccCC-CCeeEEEEhHHHHHhhcc---C---CCCCCCCCCc
Confidence 467999999999999999999889999999999 67999999 599999999999988763 1 1457789999
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
| ++|+++++. +.+++ .+++++++++|+++|+++..+++.+..+++.|+|+++++..+...+.+ +......+.+.
T Consensus 307 ~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~-~~~~~~~~~~~ 385 (433)
T 1zod_A 307 DPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEP-ADGLGAKITRE 385 (433)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEE-CTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCC-ChHHHHHHHHH
Confidence 9 999888887 76654 789999999999999998777888888999999999999643211111 11235668888
Q ss_pred HHHCCceeeccCCCC--CEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSG--NTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~--nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|+++||++.+++..+ +.+||.|+++. +++|++++++++
T Consensus 386 l~~~Gv~v~~~~~~~~~~~lRi~~~~~~---t~~~i~~~l~~l 425 (433)
T 1zod_A 386 CMNLGLSMNIVQLPGMGGVFRIAPPLTV---SEDEIDLGLSLL 425 (433)
T ss_dssp HHHTTEECCEECCTTSCCEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHCCCeEeccCCCCCCCEEEEECCcCC---CHHHHHHHHHHH
Confidence 999999998865434 89999999988 589999999985
No 19
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.89 E-value=2.6e-22 Score=192.38 Aligned_cols=170 Identities=17% Similarity=0.227 Sum_probs=148.0
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhH-HHhhhhhhhccCCCCccchhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCT-FENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI-~d~~~~~~~~~~~~~~hg~T~a 80 (329)
.+||++||+|||++||||+|.+++++++++.|| ++|++++|+ |+|++++++++ ++.+.+ ..|++||+
T Consensus 210 ~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~-~~G~~~~~~~~~~~~~~~--------~~~~~~~~ 280 (395)
T 3nx3_A 210 DEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGCGL-SVGAFVINQKVASNSLEA--------GDHGSTYG 280 (395)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGTTTS-CCEEEEECHHHHHHHSCT--------TCCSSCBS
T ss_pred HHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEecccccCCC-ceEEEEEchhhhhhhcCC--------cccCCCCC
Confidence 467999999999999999999999999999999 679999995 99999999999 776643 56889999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++++++++. +.+++ +++++++++++++.|+++..++|.+..+++.|+++++++..+. ....+.+
T Consensus 281 ~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~---------~~~~~~~ 351 (395)
T 3nx3_A 281 GNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLDKSV---------KVAKVIQ 351 (395)
T ss_dssp CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTS---------CHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeEEEEEEEEeCCcc---------hHHHHHH
Confidence 99 999998887 66543 7899999999999999998889988999999999999996421 1356888
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|.++||++.+++ .+.+||.||+++ |++|++++++++
T Consensus 352 ~l~~~Gi~v~~~~--~~~iRi~~~~~~---t~e~i~~~l~~l 388 (395)
T 3nx3_A 352 KCQENALLLISCG--ENDLRFLPPLIL---QKEHIDEMSEKL 388 (395)
T ss_dssp HHHHTTEECEEET--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHHCCCEEecCC--CCEEEEECCCCC---CHHHHHHHHHHH
Confidence 8999999999865 689999999998 589999999985
No 20
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.88 E-value=2.5e-22 Score=195.97 Aligned_cols=172 Identities=17% Similarity=0.233 Sum_probs=143.4
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
.+||++||+|||++||||+|.+++++.+++.|| ++|++++|+ |+|++++++++++.+.. ..|++||++
T Consensus 232 ~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~diit~sK~l~~G~-~iG~~~~~~~l~~~l~~--------~~~~~t~~~ 302 (420)
T 2pb2_A 232 DEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGF-PVSAMLTTQEIASAFHV--------GSHGSTYGG 302 (420)
T ss_dssp HHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTS-CCEEEEECHHHHTTCC------------CCEECC
T ss_pred HHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeEEecccccCCC-ceEEEEEhHHHHHhhcC--------CCcCcccCc
Confidence 467999999999999999999988999999999 679999995 99999999998876542 358889999
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
| ++|+++++. +.+++ .+++++++++|.++|+++...+|.+..+++.|+|+++++..+.. .....+.+.
T Consensus 303 ~~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~v~~~~~~~-------~~~~~l~~~ 375 (420)
T 2pb2_A 303 NPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYK-------GRARDFLYA 375 (420)
T ss_dssp CHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECGGGT-------TCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecceEEEEEECCCch-------HHHHHHHHH
Confidence 9 999888887 66642 78999999999999999876678888899999999999863210 013568888
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|+++||++.+.+ ++.+||.||+++ +++|++++++++
T Consensus 376 l~~~Gi~v~~~~--~~~iRl~~~~~~---t~eei~~~~~~l 411 (420)
T 2pb2_A 376 GAEAGVMVLNAG--ADVMRFAPSLVV---EEADIHEGMQRF 411 (420)
T ss_dssp HHHTTEECEESS--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHCCCEEEeCC--CCEEEEECCCCC---CHHHHHHHHHHH
Confidence 999999999864 689999999987 589999999985
No 21
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.88 E-value=5.5e-22 Score=193.00 Aligned_cols=179 Identities=9% Similarity=-0.063 Sum_probs=146.4
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||++|| |+|.+++++++++.|| ++|++++| +|+|++++++++++.+.. .....|++||+
T Consensus 232 ~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~G-~~iG~~~~~~~i~~~~~~-----~~~~~~~~t~~ 304 (434)
T 3l44_A 232 VHEAGALVIYDEVITAF-RFMYGGAQDLLGVTPDLTALGKVIGGG-LPIGAYGGKKEIMEQVAP-----LGPAYQAGTMA 304 (434)
T ss_dssp HHTTTCEEEEECTTTTT-TSSSSCHHHHHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTBTT-----TSSBCCCCTTT
T ss_pred HHHcCCEEEEeccccce-eccccHHHHHcCCCCCeeehhhhhcCC-cCeeeEEEcHHHHHhhcc-----CCCcccCCCCC
Confidence 34689999999999999 9999999999999999 67999999 599999999999987653 11256899999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC-----CCCChHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK-----VPLNSRHM 150 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~-----~p~~~~~~ 150 (329)
+| ++|+++++. +.+++ ++++++++++++++|+++...++.+..+++.|+|+++++..+.... .+ +....
T Consensus 305 ~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~ 383 (434)
T 3l44_A 305 GNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDT-DGEMF 383 (434)
T ss_dssp TCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHS-CHHHH
T ss_pred cCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccEEEEEEecCcccchhhcccc-CHHHH
Confidence 99 999999988 76643 8899999999999999998888888899999999999996422100 00 12345
Q ss_pred HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+.+.|+++||++.+++ .+.+++ ++++ |++|++++++++
T Consensus 384 ~~~~~~l~~~Gv~v~~~~--~~~~rl--~~~~---t~e~i~~~l~~l 423 (434)
T 3l44_A 384 GKFFKLMLQEGVNLAPSK--YEAWFL--TTEH---TKEDIEYTIEAV 423 (434)
T ss_dssp HHHHHHHHHTTEECCSST--TCCEEC--CTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHCCeEEeecC--CCcEEE--eccc---CHHHHHHHHHHH
Confidence 678899999999998864 356665 4554 689999999985
No 22
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.79 E-value=4.2e-24 Score=214.28 Aligned_cols=180 Identities=11% Similarity=-0.000 Sum_probs=146.6
Q ss_pred CccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 2 DTTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 2 ~~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
++..+||++||+|||+| | |+|.+|+++++|+.|| ++|+++||+ |+|++++++++++.+.+ . ....+.|++|
T Consensus 261 ~l~~~~g~llI~DEv~~-~-r~g~~~a~~~~gv~pDi~t~sK~lg~G~-piG~v~~~~~i~~~l~~--~-~~g~~~~~~T 334 (465)
T 2yky_A 261 AEASRCGALLIFDEVMT-S-RLSGGGAQEMLGISADLTTLGKYIGGGM-SFGAFGGRRDLMERFDP--A-RDGAFAHAGT 334 (465)
Confidence 34567899999999999 6 9999999999999999 679999995 99999999999988763 0 0012468899
Q ss_pred hhcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCC-----CCCCCChH
Q psy7882 79 ISDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKE-----TKVPLNSR 148 (329)
Q Consensus 79 ~agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~-----~~~p~~~~ 148 (329)
|++| ++|++++++ +++++ ++++++++++|+++|+++.++++.+.+|||.|+|++|+|..++. .+.+ +.+
T Consensus 335 ~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~-d~~ 413 (465)
T 2yky_A 335 FNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAA-DQQ 413 (465)
Confidence 9999 999999998 87754 78999999999999999988888889999999999999974211 0001 123
Q ss_pred HHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
....+.+.|+++||++.+++. + . ||+++ |++|||++++++
T Consensus 414 ~~~~~~~~ll~~GV~v~p~~~-~-~----~s~~~---t~edid~~l~~l 453 (465)
T 2yky_A 414 LKELFFFHMLRKGIYLAPRGM-Y-A----LSLEI---ADAGRDAFAEAL 453 (465)
Confidence 456789999999999998652 2 1 77765 689999999986
No 23
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.87 E-value=8.5e-22 Score=192.74 Aligned_cols=182 Identities=15% Similarity=0.089 Sum_probs=145.7
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhh-ccCCCCccchhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKY-QILKTPAHKLKIS 80 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~-~~~~~~~hg~T~a 80 (329)
.+||++||+|||+|||||+|.+++++++++.|| ++|+++||++|+|++++++++++.+..... .....+.|++||+
T Consensus 250 ~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~s~sK~l~~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~ 329 (449)
T 3a8u_X 250 NQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYS 329 (449)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTT
T ss_pred HHhCCEEEEeccccCccccCcchhhhhcCCCCCEEEEcccccCCCCceEEEEECHHHHHHhhccCcccccccccccCCCc
Confidence 457999999999999999999889999999999 579999997799999999999988763000 0001236888999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+| ++|+++++. +.+++ .+++++++++++++|+++ .+++.+..+++.|+|+++++..+.... ......+..
T Consensus 330 ~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~----~~~~~~~~~ 404 (449)
T 3a8u_X 330 AHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGI-KGAKNVIDIRNFGLAGAIQIAPRDGDA----IVRPFEAGM 404 (449)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-TTSTTEEEEEEETTEEEEEECCBTTBS----SHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-hcCCCeEEEeeeEEEEEEEEecCcccc----cccHHHHHH
Confidence 99 999888887 76654 789999999999999884 457878889999999999996432110 001235888
Q ss_pred HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|.++||++.+.+ +.+||.||+++ +++|++++++++
T Consensus 405 ~l~~~Gv~v~~~g---~~iRis~~~~~---t~~~i~~~l~~l 440 (449)
T 3a8u_X 405 ALWKAGFYVRFGG---DTLQFGPTFNS---KPQDLDRLFDAV 440 (449)
T ss_dssp HHHHHTEECEEET---TEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHHCCcEEecCC---CEEEEECCCcC---CHHHHHHHHHHH
Confidence 8889999999853 89999999988 589999999985
No 24
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.86 E-value=5.3e-22 Score=197.72 Aligned_cols=165 Identities=16% Similarity=0.262 Sum_probs=137.1
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCc--ch---HHHh-hcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQIC--RF---VQKD-FKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~--PD---i~Ka-LgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
..+||++||+|||||||||+|.+|+++++|+. || ++|+ ++||+ ++ ++++. .+ ....|++
T Consensus 288 ~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~l~GG~-~~-----~~~~~-~~--------~~~~~~~ 352 (472)
T 1ohv_A 288 SRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGGF-FH-----KEEFR-PN--------APYRIFN 352 (472)
T ss_dssp HHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEECGGGSSEEE-EE-----CGGGS-CS--------SSSSSCC
T ss_pred HHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEccccccCCc-cC-----chhhc-cc--------ccccccC
Confidence 34689999999999999999999999999997 99 6899 78886 42 44442 11 1357889
Q ss_pred hhhcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCC-ceeeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882 78 KISDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFA-IVGDVRGKGLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 78 T~agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p-~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
||++| ++|++++++ +++++ .+++++++++|+++|+++..++| .+..++|.|+|+++++.. .....
T Consensus 353 T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~~~~~~~~---------~~~~~ 423 (472)
T 1ohv_A 353 TWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTPD---------ESIRN 423 (472)
T ss_dssp SSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECSS---------HHHHH
T ss_pred ccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceEEEEEeCC---------hhHHH
Confidence 99999 999999888 77654 78999999999999999877888 488899999999998742 12356
Q ss_pred HHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+...|+++||++.+++ .++|||.||+++ |++|||++++++
T Consensus 424 ~~~~~l~~~Gv~~~~~g--~~~iRi~~~~~~---t~e~i~~~~~~l 464 (472)
T 1ohv_A 424 KLISIARNKGVMLGGCG--DKSIRFRPTLVF---RDHHAHLFLNIF 464 (472)
T ss_dssp HHHHHHHHTTEECEEET--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHCCeEEecCC--CCEEEEECCCCC---CHHHHHHHHHHH
Confidence 78899999999998864 589999999998 589999999985
No 25
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.86 E-value=1.3e-21 Score=192.89 Aligned_cols=172 Identities=17% Similarity=0.169 Sum_probs=143.4
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+||||+||||+|.+|+++++++.|| ++|++ |+|++++++++++.+.+ .......|++||+
T Consensus 261 ~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l-----~iG~~~~~~~~~~~l~~---~~~~~~~~~~t~~ 332 (449)
T 2cjg_A 261 CDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKT-----QVCGVMAGRRVDEVADN---VFAVPSRLNSTWG 332 (449)
T ss_dssp HHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGG-----SSEEEEECGGGGGSTTC---TTTSTTSSCCSSS
T ss_pred HHHCCcEEEEeccccCCCccCcceeecccCCCceEEEecCcc-----cEEEEEECHHHhhhhhh---cccCCcccccCCC
Confidence 3568999999999999999999999999999999 57887 99999999998875321 0011246889999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCc-eeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAI-VGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~-v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
+| ++|+++++. +.+++ .+++++++++|+++|+++..+++. +..+++.|+|+++++.. ......+.
T Consensus 333 ~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~~~~~~~~~---------~~~~~~~~ 403 (449)
T 2cjg_A 333 GNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSLPT---------TADRDELI 403 (449)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETTEEEEECSS---------HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccEEEEEEECC---------hHHHHHHH
Confidence 99 999998887 76643 789999999999999999878886 88999999999998852 12345688
Q ss_pred HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..|+++||++.++| .+.+|+.||+++ +++||+++++++
T Consensus 404 ~~l~~~Gv~v~~~g--~~~iRi~~~~~~---t~e~i~~~l~~l 441 (449)
T 2cjg_A 404 RQLWQRAVIVLPAG--ADTVRFRPPLTV---STAEIDAAIAAV 441 (449)
T ss_dssp HHHHHTTEECEEET--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHHHCCeEEecCC--CCEEEEECCCCC---CHHHHHHHHHHH
Confidence 88999999999875 589999999988 589999999985
No 26
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.86 E-value=3e-21 Score=187.81 Aligned_cols=178 Identities=10% Similarity=-0.000 Sum_probs=143.8
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
.+||++||+|||++|| |+|.+++++++++.|| ++|++++|+ |+|++++++++++.+.. . ....|++||++
T Consensus 231 ~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pdi~t~sK~~~~G~-~~G~~~~~~~~~~~l~~--~---~~~~~~~t~~~ 303 (429)
T 4e77_A 231 DEFGALLIIDEVMTGF-RVALAGAQDYYHVIPDLTCLGKIIGGGM-PVGAFGGRREVMNALAP--T---GPVYQAGTLSG 303 (429)
T ss_dssp HHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCSEEEEEGGGGTTS-CCEEEEECHHHHTTBTT--T---SSBCC--CCCC
T ss_pred HHcCCEEEEeccccCc-ccCcchHHHhcCCCCCeeeecccccCCC-CeEEEEECHHHHHHhcc--C---CCccccCCCCC
Confidence 4679999999999999 9999999999999999 679999994 99999999999987753 1 12468999999
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCC------ChHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPL------NSRHM 150 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~------~~~~~ 150 (329)
| ++|+++++. +.+++ ++++++++++++++|+++..+++.+..++|.|+|+++++..+.. ..++ +....
T Consensus 304 ~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 382 (429)
T 4e77_A 304 NPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADT-VTCYQDVMNCDVERF 382 (429)
T ss_dssp CHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSC-CCSHHHHHTSCHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcc-cccccccccccHHHH
Confidence 9 999999988 76643 88999999999999999988899889999999999999965321 1111 12345
Q ss_pred HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+.+.|+++||++.+++. ..+ .+++++ |++|++++++++
T Consensus 383 ~~~~~~l~~~Gi~v~~~~~--~~~--~~~~~~---t~e~i~~~l~~l 422 (429)
T 4e77_A 383 KRFFHLMLEEGVYLAPSAF--EAG--FMSLAH---SNEDIQKTVNAA 422 (429)
T ss_dssp HHHHHHHHHTTEECCSSTT--SCE--ECCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHCCeEEeecCC--CCE--EEeccC---CHHHHHHHHHHH
Confidence 6788999999999998652 333 345655 689999999985
No 27
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.85 E-value=2.4e-21 Score=188.78 Aligned_cols=179 Identities=14% Similarity=0.064 Sum_probs=145.6
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||++|| |+|.+++++++++.|| ++|++++| +|+|++++++++++.+.. .....|++||+
T Consensus 230 ~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~G-~~iG~~~~~~~~~~~~~~-----~~~~~~~~t~~ 302 (429)
T 3k28_A 230 TEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPDLTCLGKVIGGG-LPVGAYGGKAEIMRQVAP-----SGPIYQAGTLS 302 (429)
T ss_dssp HHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGGTT-SCCEEEEECHHHHTTBTT-----TSSBCCCCTTT
T ss_pred HHHcCCEEEEecccccc-ccCcchHHHHhCCCCceehhhhhhcCC-CCeEEEEEcHHHHhhhcc-----CCCccccCCCC
Confidence 34679999999999999 9999999999999999 67999998 599999999999987652 11246889999
Q ss_pred cc-HHHHHHHHh-hHHhH--HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC-----CCCCChHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER--FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET-----KVPLNSRHMT 151 (329)
Q Consensus 81 gn-lA~aaala~-~ile~--le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~-----~~p~~~~~~~ 151 (329)
+| ++|+++++. +.+++ ++++++.+++++++|+++..+++.+..+++.|+|+++++..+... ..+ +.....
T Consensus 303 ~~~~a~aaa~aal~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 381 (429)
T 3k28_A 303 GNPLAMAAGYETLVQLTPESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFFTDEPVINYDAAKSS-NLQFFA 381 (429)
T ss_dssp TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTS-CHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEEecCCcccccccccc-cHHHHH
Confidence 99 999999887 55434 889999999999999999888999999999999999999643211 001 223457
Q ss_pred HHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 152 HILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.+.|+++||++.+++ .+.+++ ++++ |++|++++++++
T Consensus 382 ~~~~~l~~~Gv~v~~~~--~~~~r~--~~~~---t~e~i~~~l~~l 420 (429)
T 3k28_A 382 AYYREMVEQGVFLPPSQ--FEGLFL--STVH---SDADIEATIAAA 420 (429)
T ss_dssp HHHHHHHHTTEECCSST--TSCBCC--CTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHCCeEEecCC--CCCEEE--ECCC---CHHHHHHHHHHH
Confidence 78899999999998864 345554 4554 689999999985
No 28
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.85 E-value=4.8e-21 Score=186.63 Aligned_cols=179 Identities=8% Similarity=0.018 Sum_probs=143.0
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||++|| |+|.+++++++|+.|| ++|++++| +|+|++++++++++.+.. .. ...|++||+
T Consensus 233 ~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~~G-~~~G~v~~~~~~~~~l~~--~~---~~~~~~t~~ 305 (434)
T 2epj_A 233 SRESGALLILDEVVTGF-RLGLEGAQGYFNIEGDIIVLGKIIGGG-FPVGAVAGSREVMSLLTP--QG---KVFNAGTFN 305 (434)
T ss_dssp HHHHTCEEEEEETTTTT-TSSTTHHHHHHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTBTT--TS---SBCCCCTTT
T ss_pred HHHcCCEEEEEcchhce-eCCcchhhHHhCCCCCeeeecchhcCC-cceeeeeecHHHHHhhcc--CC---CcccCCCCC
Confidence 34679999999999999 8999899999999999 57999999 599999999999987652 11 235889999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC-----CCCCChHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET-----KVPLNSRHM 150 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~-----~~p~~~~~~ 150 (329)
+| ++|+++++. +.+++ .+++++++++|+++|+++..+++.+..++|.|+|+++++..++.. +.+ +....
T Consensus 306 ~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~-~~~~~ 384 (434)
T 2epj_A 306 AHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKA-DKKFY 384 (434)
T ss_dssp TCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTS-CHHHH
T ss_pred cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhcccc-CHHHH
Confidence 99 999998888 76654 789999999999999998777787778999999999999642110 000 11245
Q ss_pred HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+.+.|+++||++.+++. . ++.+|+++ +++|++++++++
T Consensus 385 ~~~~~~l~~~Gv~v~~~~~--~--~~~~~~~~---t~e~i~~~l~~l 424 (434)
T 2epj_A 385 VKLHEEMLRRGVFIAPSNL--E--AVFTGLPH---QGEALEIAVEGL 424 (434)
T ss_dssp HHHHHHHHHTTEECCSSTT--S--CEECCTTC---SHHHHHHHHHHH
T ss_pred HHHHHHHHHCCeEEeccCC--C--cEEEeccC---CHHHHHHHHHHH
Confidence 6788999999999988652 2 24567665 689999999986
No 29
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.85 E-value=8.1e-21 Score=184.36 Aligned_cols=179 Identities=12% Similarity=0.007 Sum_probs=146.7
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||++|| |+|.+++++++++.|| ++|++++|+ |+|++++++++++.+.. . ....|++||+
T Consensus 229 ~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~G~-~~G~~~~~~~~~~~~~~--~---~~~~~~~t~~ 301 (427)
T 3fq8_A 229 TLEHDALLVFDEVITGF-RIAYGGVQEKFGVTPDLTTLGKIIGGGL-PVGAYGGKREIMQLVAP--A---GPMYQAGTLS 301 (427)
T ss_dssp HHHTTCEEEEECTTTBT-TTBTTHHHHHTTCCCSEEEECGGGGTTS-SCEEEEECHHHHTTBTT--T---SSBCCCCTTT
T ss_pred HHHcCCEEEEecccccc-ccCcchhhHhcCCCCChhhhhhhhhCCc-ceEEEEEcHHHHHhhcc--C---CCccccCCCC
Confidence 34689999999999999 9999999999999999 679999995 99999999999987753 1 2357899999
Q ss_pred cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC-----CCCCChHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET-----KVPLNSRHM 150 (329)
Q Consensus 81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~-----~~p~~~~~~ 150 (329)
+| ++|+++++. +.+++ ++++++++++++++|+++..+++.+..++|.|+|+++++..++.. ..+ +....
T Consensus 302 ~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~ 380 (427)
T 3fq8_A 302 GNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKS-DLQKF 380 (427)
T ss_dssp TCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTS-CHHHH
T ss_pred cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccc-cHHHH
Confidence 99 999999888 76643 789999999999999999888888889999999999999643211 001 12345
Q ss_pred HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+.+.|+++||++.+++. . ++.+++++ +++|++++++++
T Consensus 381 ~~l~~~l~~~Gi~v~~~~~--~--r~~~~~~~---t~e~i~~~l~~l 420 (427)
T 3fq8_A 381 SRFHRGMLEQGIYLAPSQF--E--AGFTSLAH---TEEDIDATLAAA 420 (427)
T ss_dssp HHHHHHHHHTTEECCSSTT--S--CEECCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHCCcEEecCCC--C--CEEeeCcC---CHHHHHHHHHHH
Confidence 6788999999999988652 2 46677776 689999999985
No 30
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.85 E-value=8.7e-21 Score=184.26 Aligned_cols=178 Identities=12% Similarity=0.042 Sum_probs=142.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
.+||++||+|||++|| |+|.+++++++|+.|| ++|++++| +|+|++++++++++.+.. .. ...|++||++
T Consensus 229 ~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~~G-~~~G~~~~~~~~~~~~~~--~~---~~~~~~t~~~ 301 (424)
T 2e7u_A 229 KAYGVLLIADEVMTGF-RLAFGGATELLGLKPDLVTLGKILGGG-LPAAAYAGRREIMEKVAP--LG---PVYQAGTLSG 301 (424)
T ss_dssp GGGTCEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGGTT-SSCEEEEECHHHHTTBTT--TS---SBCCCCTTCS
T ss_pred HHcCCEEEEecCcccc-ccchhHHHHHhCCCcchhhhhhhhhCC-cceEEEEEcHHHHhhhcc--cC---CcccCCCCCC
Confidence 5789999999999999 8999899999999999 67999999 599999999999987652 11 2458899999
Q ss_pred c-HHHHHHHHh-hHHh---H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC-----CCCCChHHH
Q psy7882 82 T-VRPHVQIKK-SVLE---R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET-----KVPLNSRHM 150 (329)
Q Consensus 82 n-lA~aaala~-~ile---~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~-----~~p~~~~~~ 150 (329)
| ++|+++++. +.++ + .+++++++++++++|+++..+++.+..+++.|+|+++++...+.. +.+ +....
T Consensus 302 ~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~-~~~~~ 380 (424)
T 2e7u_A 302 NPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRT-DTELF 380 (424)
T ss_dssp CHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTS-CHHHH
T ss_pred CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhccc-CHHHH
Confidence 9 999988887 6653 2 789999999999999999888887778999999999999642100 000 12345
Q ss_pred HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+.+.|+++||++.+++. .. +.+++++ +++|++++++++
T Consensus 381 ~~~~~~l~~~Gv~v~~~~~--~~--~~~~~~~---t~~~i~~~l~~l 420 (424)
T 2e7u_A 381 KRFFHGLLDRGIYWPPSNF--EA--AFLSVAH---REEDVEKTLEAL 420 (424)
T ss_dssp HHHHHHHHTTTEECCSSSS--SC--EECCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHCCeEEeccCC--Cc--eEeeccC---CHHHHHHHHHHH
Confidence 6788999999999988652 22 4566665 689999999875
No 31
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.83 E-value=5.8e-20 Score=178.45 Aligned_cols=174 Identities=15% Similarity=0.110 Sum_probs=141.8
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
.+||++||+||||+||||+|.+++++++++.|| ++|+++||++|+|++++++++++.+.. .....+.|++||++
T Consensus 236 ~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t~sK~l~~G~~~iG~~~~~~~~~~~l~~---~~~~~~~~~~t~~~ 312 (429)
T 1s0a_A 236 DREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISN---GEAGCFMHGPTFMG 312 (429)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTSSSCCEEEEECHHHHHHHHT---STTSSCSCCCTTTT
T ss_pred HHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEEEecccccCCCccceEEEeCHHHHHHhhc---CCCcccccCCCCCC
Confidence 457999999999999999998888999999999 579999996699999999999887753 10112347889999
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
| ++++++++. +.+++ .+++++++++|.++|+++.. +|.+..+++.|.++.+++... .+ ...+...
T Consensus 313 n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-~~~~~~~~~~g~~~~~~~~~~------~~---~~~l~~~ 382 (429)
T 1s0a_A 313 NPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARD-AEMVADVRVLGAIGVVETTHP------VN---MAALQKF 382 (429)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGG-CTTEEEEEEETTEEEEEESSC------BC---HHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEEeeEEEEEEECCc------cc---HHHHHHH
Confidence 9 888888877 66543 78899999999999988743 677778899999999998531 11 3457888
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|.++||++.+. ++.+|+.||++. +++|++++++++
T Consensus 383 l~~~Gi~v~~~---~~~iRis~~~~~---t~e~i~~~~~~l 417 (429)
T 1s0a_A 383 FVEQGVWIRPF---GKLIYLMPPYII---LPQQLQRLTAAV 417 (429)
T ss_dssp HHHTTEECCCB---TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHCCCEEecc---CCEEEEECCCCC---CHHHHHHHHHHH
Confidence 88999999875 479999999988 589999999975
No 32
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.83 E-value=3.3e-20 Score=181.94 Aligned_cols=200 Identities=11% Similarity=0.021 Sum_probs=142.2
Q ss_pred cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..+||++||+|||++|| |+|.+++++++|+.|| ++|++++|+ |+|++++++++++.+.. .......|++||+
T Consensus 231 ~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~~G~-~~G~v~~~~~~~~~l~~---~~~~~~~~~~t~~ 305 (453)
T 2cy8_A 231 ARQYGALFILDEVISGF-RVGNHGMQALLDVQPDLTCLAKASAGGL-PGGILGGREDVMGVLSR---GSDRKVLHQGTFT 305 (453)
T ss_dssp HHHTTCEEEEECTTTTT-TTCTTHHHHHHTCCCSEEEEEGGGGTTS-SCEEEEECHHHHTTSSS---CC---------CC
T ss_pred HHHcCCEEEEecCcccc-ccCchhhhHHhCCCCcEEEEChhhhCCc-ceEEEechHHHHHHhcc---ccCCCceeCCCCC
Confidence 35689999999999999 9999899999999999 579999995 99999999999887642 0001135788999
Q ss_pred cc-HHHHHHHHh-hH-H-hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeec-----CC------CCCCC
Q psy7882 81 DT-VRPHVQIKK-SV-L-ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQ-----DK------ETKVP 144 (329)
Q Consensus 81 gn-lA~aaala~-~i-l-e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~-----d~------~~~~p 144 (329)
+| ++|+++++. +. + ++ .+++++++++|+++|+++..+++.+..+++.|+|+++++.. +. ....+
T Consensus 306 ~n~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 385 (453)
T 2cy8_A 306 GNPITAAAAIAAIDTILEDDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARP 385 (453)
T ss_dssp CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCC
T ss_pred CCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccc
Confidence 99 999998888 66 4 33 78999999999999999877788777899999999999963 10 00000
Q ss_pred CChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhccccchhhhh--hhhhhhhcccCCch
Q psy7882 145 LNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQSY--AGSINKLTGKNSSN 219 (329)
Q Consensus 145 ~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~~~~~~~~~--~~~~~~~~~~~~~~ 219 (329)
+......+...|+++||++.+. + .+ .+++++ +++|++++++++. ..+.++ .|.+|....+++.|
T Consensus 386 -~~~~~~~l~~~l~~~Gv~v~~~---~-~~--~l~~~~---t~~~i~~~l~~l~-~~l~~~~~~~~~~~~~~~~~~~ 451 (453)
T 2cy8_A 386 -DVKMIAAMRMALILEGVDIGGR---G-SV--FLSAQH---EREHVEHLVTTFD-RVLDRLADENLLSWQGTNLSGN 451 (453)
T ss_dssp -CHHHHHHHHHHHHHTTEECBTT---T-EE--ECCTTC---CHHHHHHHHHHHH-HHHHHHHHTTCCCCCC------
T ss_pred -cHHHHHHHHHHHHHCCeEEeCC---C-CE--EeeccC---CHHHHHHHHHHHH-HHHHHHHhCCCccccccccCCC
Confidence 1223567888999999999642 2 23 456655 6899999999752 122222 37788777777654
No 33
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.82 E-value=4.1e-20 Score=179.71 Aligned_cols=163 Identities=18% Similarity=0.219 Sum_probs=132.0
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
.+||++||+|||++||||+|.+++++++++.|| ++|++++|++|+|+++++++++ .+ . ..|++||++
T Consensus 243 ~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~~riG~~~~~~~~~-~~-~--------~~~~~t~~~ 312 (419)
T 2eo5_A 243 KKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVITLAKALGGGIMPIGATIFRKDLD-FK-P--------GMHSNTFGG 312 (419)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTSCCEEEEEEGGGC-CC---------------CCCC
T ss_pred HHcCCEEEEeccccCCccCcchhhHHhcCCCCCEEEecccccCCccceEEEEEchHhh-cC-C--------cccCCCCCC
Confidence 457999999999999999999888899999999 6799999956999999999887 55 3 357789999
Q ss_pred c-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCK 158 (329)
Q Consensus 82 n-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~ 158 (329)
| ++++++++. +.+++ .+++++++++|.++|+++ +..+++.|+|+.+++.++ ..... +...|+
T Consensus 313 n~~~~~aa~aal~~~~~~~~~~~~~~~~l~~~L~~~------~~~~~~~g~~~~i~~~~~--------~~~~~-~~~~l~ 377 (419)
T 2eo5_A 313 NALACAIGSKVIDIVKDLLPHVNEIGKIFAEELQGL------ADDVRGIGLAWGLEYNEK--------KVRDR-IIGESF 377 (419)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS------SSEEEEETTEEEEECSCH--------HHHHH-HHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hhheEeeeEEEEEEEecC--------ccHHH-HHHHHH
Confidence 9 888888877 66555 678889999998888665 567899999999988421 12245 888889
Q ss_pred HCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 159 EHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 159 e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
++||++.+++ .+.+||.|+++. +++|++++++++
T Consensus 378 ~~Gv~v~~~~--~~~lRis~~~~~---t~e~i~~~l~~l 411 (419)
T 2eo5_A 378 KRGLLLLPAG--RSAIRVIPPLVI---SEEEAKQGLDIL 411 (419)
T ss_dssp HTTEECEEET--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HCCCEEecCC--CCEEEEECCCCC---CHHHHHHHHHHH
Confidence 9999999865 589999999988 589999999985
No 34
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.80 E-value=8.4e-19 Score=169.02 Aligned_cols=180 Identities=20% Similarity=0.279 Sum_probs=144.9
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
.+||+++|+||+++||+++|.+++++.+++.|| ++|++++| +|+|++++++++++.+.. ..+..|+++
T Consensus 230 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G-lriG~~~~~~~~~~~l~~--------~~~~~~~~~ 300 (426)
T 1sff_A 230 DEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGG-FPLAGVTGRAEVMDAVAP--------GGLGGTYAG 300 (426)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGTS-SCCEEEEEEHHHHTTSCT--------TSBCCSSSS
T ss_pred HHcCCEEEEechhhccCcccchhhhhhcCCCCCEEEEcccccCC-CceEEEEEcHHHHhhhcc--------CCcCcCCCC
Confidence 457999999999999999998888899999999 67999998 599999999998876542 346788888
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
+ ++++++.+. +.+++ .+++++++++++++|+++...++.+..+++.|.++.+++......+.| +......+...
T Consensus 301 ~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 379 (426)
T 1sff_A 301 NPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKP-DAKLTAEIVAR 379 (426)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTEEEEEEBGGGCTTSB-CHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCC-ChHHHHHHHHH
Confidence 8 888887766 65543 788999999999999998666787778899999999999532111111 11235668888
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|.++||++.+++...+.+|+.|++.. +++|++++++++
T Consensus 380 l~~~gi~v~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l 417 (426)
T 1sff_A 380 ARDKGLILLSCGPYYNVLRILVPLTI---EDAQIRQGLEII 417 (426)
T ss_dssp HHHTTEECEEESTTSCEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHCCcEEecCCCCCCEEEEECCccC---CHHHHHHHHHHH
Confidence 99999999986544689999999877 589999999985
No 35
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.79 E-value=1e-18 Score=167.10 Aligned_cols=172 Identities=16% Similarity=0.221 Sum_probs=145.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
..||+++|+||+++|||++|..++++.+++.|| ++|++++| +|+|++++++++++.+.. ..|++||+.
T Consensus 214 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~t~sK~~~~G-~r~G~~~~~~~~~~~~~~--------~~~~~~~~~ 284 (406)
T 4adb_A 214 NRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGG-FPVGALLATEECARVMTV--------GTHGTTYGG 284 (406)
T ss_dssp HHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTT-SCCEEEEECHHHHHTCCT--------TSSCCSSTT
T ss_pred HHcCCEEEEeccccCCCccchhHHHHhcCCCCCEEEechhhcCC-CCeEEEEEcHHHHhhhcc--------CCcCCCCCC
Confidence 467999999999999999999999999999999 57999998 599999999999877653 467889999
Q ss_pred c-HHHHHHHHh-hHHh--H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLE--R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 82 n-lA~aaala~-~ile--~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
+ ++++++++. +.++ + .++++++.+++.+.|+++...++.+.++++.|+++++++..+.. .....+.+.
T Consensus 285 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~ 357 (406)
T 4adb_A 285 NPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYA-------GQAKQISQE 357 (406)
T ss_dssp CHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTT-------TCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcH-------HHHHHHHHH
Confidence 9 888888776 5553 2 78899999999999999877778888999999999999964210 124568889
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|.++||++.+.+ .+.+|+.|++.. +++|++++++++
T Consensus 358 l~~~gi~v~~~~--~~~iRi~~~~~~---~~e~i~~~~~~l 393 (406)
T 4adb_A 358 AAKAGVMVLIAG--GNVVRFAPALNV---SEEEVTTGLDRF 393 (406)
T ss_dssp HHHTTEECEESS--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHCCcEEeecC--CCeEEEECCCCC---CHHHHHHHHHHH
Confidence 999999999864 689999999887 589999999985
No 36
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.77 E-value=1.9e-18 Score=165.10 Aligned_cols=167 Identities=19% Similarity=0.247 Sum_probs=138.9
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
..||+++|+||+++|||++|..++++.+++.|| ++|+|+||++|+|++++++++++.+.. ..+++||+.
T Consensus 213 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~SK~l~gG~~~~G~~~~~~~~~~~~~~--------~~~~~~~~~ 284 (392)
T 3ruy_A 213 KKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILGKALGGGVFPISCAAANRDILGVFEP--------GSHGSTFGG 284 (392)
T ss_dssp HTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTSCCEEEEECHHHHTTCCT--------TSSCCSSTT
T ss_pred HHcCCEEEEeechhCCCccccchhhhccCCCCCEEEEchhhhCChhhhEEEEECHHHHhhhcc--------CCcCCCCCC
Confidence 467999999999999999999999999999999 679999996799999999998876642 467888999
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
+ ++++++.+. +.+++ .++++++.++|.+.|+++ .++.+..+++.|.++.+.+.. . ...+.+.
T Consensus 285 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~g~~~~~~~~~-~----------~~~l~~~ 351 (392)
T 3ruy_A 285 NPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEI--DNPMITEVRGKGLFIGIELNE-P----------ARPYCEQ 351 (392)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTC--CCTTEEEEEEETTEEEEEESS-C----------SHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHh--cCCCceEEEeeeeEEEEEEcc-h----------HHHHHHH
Confidence 9 888877776 55532 778889999999988765 236678899999999999743 1 2357888
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|.++||++.+++ .+.+|+.||+.. +++|++++++++
T Consensus 352 l~~~gi~v~~~~--~~~iRi~~~~~~---~~~~i~~~~~~l 387 (392)
T 3ruy_A 352 LKAAGLLCKETH--ENVIRIAPPLVI---SEEDLEWAFQKI 387 (392)
T ss_dssp HHTTTEECCCBT--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHCCcEEecCC--CCEEEEECCCCC---CHHHHHHHHHHH
Confidence 899999998864 689999999987 589999999875
No 37
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.72 E-value=3.6e-17 Score=156.68 Aligned_cols=169 Identities=22% Similarity=0.305 Sum_probs=136.9
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
.+||+++|+||+++||+++|..++++.+++.|| ++|++++|+ ++|+++++++++ .+.. ..++.||+.
T Consensus 214 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~-r~G~~~~~~~~~-~l~~--------~~~~~~~~~ 283 (397)
T 2ord_A 214 DEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVLTTAKGLGGGV-PIGAVIVNERAN-VLEP--------GDHGTTFGG 283 (397)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTS-CCEEEEECSTTC-CCCT--------TSSCCSSTT
T ss_pred HHcCCEEEEEecccCCccCccchhhhhhCCCCCeeeeccccCCCc-CeEEEEEchHhc-ccCC--------CCcCCCCCC
Confidence 457999999999999999998777888899999 579999995 999999998876 4431 346778888
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
+ ++++++.+. +.+++ .++++++.++|.+.|+++...++.+..+++.|.++.+++..+. ....+.+.
T Consensus 284 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~---------~~~~l~~~ 354 (397)
T 2ord_A 284 NPLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREEV---------SNREVATK 354 (397)
T ss_dssp CHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTS---------CHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEECChH---------HHHHHHHH
Confidence 8 777777666 55532 7889999999999999875567777778999999999885321 13458888
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|.++||++.+.+ .+.+|+.||+.. +++|++++++++
T Consensus 355 l~~~gi~v~~~~--~~~iRis~~~~~---~~e~i~~~~~~l 390 (397)
T 2ord_A 355 CFENKLLVVPAG--NNTIRFLPPLTV---EYGEIDLAVETL 390 (397)
T ss_dssp HHHTTEECEEET--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHCCCEEccCC--CCEEEEECCcCC---CHHHHHHHHHHH
Confidence 999999999864 679999999876 589999999975
No 38
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.61 E-value=2.5e-15 Score=143.50 Aligned_cols=166 Identities=17% Similarity=0.274 Sum_probs=131.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
..||+++|+||+++||+++|..++++.+++.|| ++|.+++| +++|++++++++++.+.. ..++.|++.
T Consensus 216 ~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~g-~~~G~~~~~~~~~~~l~~--------~~~~~~~~~ 286 (395)
T 1vef_A 216 QEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDILTLAKALGGG-VPLGVAVMREEVARSMPK--------GGHGTTFGG 286 (395)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTT-SSCEEEEEEHHHHHTSCT--------TSSCCSSTT
T ss_pred HHcCCEEEEEecccCCccCCchhHhhhcCCCCCEEEEcccccCC-CceEEEEehHHHHhhhcc--------CCcCCCcCC
Confidence 357999999999999999998877888899999 57999998 599999999988766542 236678888
Q ss_pred c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
+ ++++++.+. +.+++ .++++++.+++.+.|+++. .+.+..+++.|.++.+++..+ ...+.+.
T Consensus 287 ~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~g~~~~~~~~~~-----------~~~l~~~ 353 (395)
T 1vef_A 287 NPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIP--SPKIREVRGMGLMVGLELKEK-----------AAPYIAR 353 (395)
T ss_dssp CHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSC--CTTEEEEEEETTEEEEEESSC-----------SHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh--cCceEEEEEEEEEEEEEEcCh-----------HHHHHHH
Confidence 8 777766665 54432 6788899999998887752 244556788999999988531 2347788
Q ss_pred HH-HCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CK-EHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~-e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|. ++||++.+.+ .+.+|+.|++.. +++|++++++++
T Consensus 354 l~~~~gi~v~~~~--~~~iRi~~~~~~---~~~~i~~~~~~l 390 (395)
T 1vef_A 354 LEKEHRVLALQAG--PTVIRFLPPLVI---EKEDLERVVEAV 390 (395)
T ss_dssp HHHHHCEECEESS--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HHHHCCeEEecCC--CCEEEEeCCCCC---CHHHHHHHHHHH
Confidence 88 8999998853 689999998876 589999999875
No 39
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.58 E-value=1.8e-14 Score=136.15 Aligned_cols=163 Identities=20% Similarity=0.336 Sum_probs=127.0
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
..||+++|+||+++|||++|..++.+.+|+.|| ++|.+++| +++|++++++++++.+.. ..++.|++.
T Consensus 203 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~s~SK~~~~g-~~~G~~~~~~~~~~~~~~--------~~~~~~~~~ 273 (375)
T 2eh6_A 203 KEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALAKGLGGG-VPIGAILAREEVAQSFTP--------GSHGSTFGG 273 (375)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTT-SCCEEEEEEHHHHTTCCT--------TSCCCSSTT
T ss_pred HHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEEEEcccccCC-CCeEEEEEcHHHHhhhcC--------CCCCCCCCC
Confidence 357999999999999999987677888898999 57999998 499999999988765542 235677777
Q ss_pred c-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHH
Q psy7882 82 T-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCK 158 (329)
Q Consensus 82 n-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~ 158 (329)
+ ++++++.+. +.+++ .++++++.++|.+.|+++ +. ..+++.|.++.+++..+ ...+.+.|.
T Consensus 274 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~~~g~~~~~~~~~~-----------~~~~~~~l~ 337 (375)
T 2eh6_A 274 NPLACRAGTVVVDEVEKLLPHVREVGNYFKEKLKEL----GK-GKVKGRGLMLGLELERE-----------CKDYVLKAL 337 (375)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TS-SEEEEETTEEEEECSSC-----------CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hc-CCceEEEEEEEEEEcCc-----------HHHHHHHHH
Confidence 7 777766655 44433 677888888888888764 22 45678899999988531 134778888
Q ss_pred HCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 159 EHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 159 e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
++||++.+.+ .+.+|+.|++.. +++|++++++++
T Consensus 338 ~~gi~~~~~~--~~~iRi~~~~~~---~~~~i~~~~~~l 371 (375)
T 2eh6_A 338 EKGLLINCTA--GKVLRFLPPLII---QKEHIDRAISVL 371 (375)
T ss_dssp HTTEECEEET--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred HCCCEEecCC--CCEEEEECCCCC---CHHHHHHHHHHH
Confidence 9999998753 689999999776 589999999875
No 40
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.44 E-value=3.5e-13 Score=130.48 Aligned_cols=167 Identities=8% Similarity=-0.032 Sum_probs=112.9
Q ss_pred ccccceEEehhHhhchhccchhh----hh--cccCCcch---HHHhhc-CCccccceeeec-hhHHHhhhhhhhccCCCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYL----GF--QCLQICRF---VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKYQILKTP 73 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~f----A~--e~~GV~PD---i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~~~~~~~ 73 (329)
.+||++||+|||++||+++|..+ .. +..++.++ ++|+++ +| +|+|+++++ +++++.+.. .
T Consensus 224 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~~~G~~~~~~~~l~~~~~~--------~ 294 (421)
T 3l8a_A 224 KKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAG-TKNSFAIIQNESLRRKFQY--------R 294 (421)
T ss_dssp HHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHH--------H
T ss_pred HHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCch-hheEeEEcCCHHHHHHHHH--------H
Confidence 46799999999999999988421 21 22455566 579998 77 599999998 889888764 2
Q ss_pred c-cchhhhcc-HHHHHHHHh-hH----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeE-EEeecCCCCCCC
Q psy7882 74 A-HKLKISDT-VRPHVQIKK-SV----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIG-VDLVQDKETKVP 144 (329)
Q Consensus 74 ~-hg~T~agn-lA~aaala~-~i----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~g-Ief~~d~~~~~p 144 (329)
. +.+++++| ++++++.+. +. +++ .++++++.++|.+.|++ +|.+..+++.|.++. +++.....
T Consensus 295 ~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~i~~~~~~~~~~~~v~~~~~~~---- 366 (421)
T 3l8a_A 295 QLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEA----KTKIKVMEPEGTYLVWLDFSAYAI---- 366 (421)
T ss_dssp HHHTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH----HCSCEEECCSBSSEEEEECGGGTC----
T ss_pred HHhcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHh----CCCceEeCCCeeEEEEEeccccCC----
Confidence 2 22445677 777666555 32 222 34445555555555544 366777888898887 88853110
Q ss_pred CChHHHHHHHHHHHH-CCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 145 LNSRHMTHILDSCKE-HGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 145 ~~~~~~~~~~~~l~e-~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+ ...+.+.|++ +||++.++. ...+.+||.++ + ++++|+++++++
T Consensus 367 -~---~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~---~~~~i~~~l~~l 415 (421)
T 3l8a_A 367 -A---QPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA--T---PKNTVQEALSRI 415 (421)
T ss_dssp -C---TTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC--S---CHHHHHHHHHHH
T ss_pred -C---HHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec--C---CHHHHHHHHHHH
Confidence 0 1347777875 599998732 23589999988 2 579999999875
No 41
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.31 E-value=6.3e-12 Score=120.82 Aligned_cols=163 Identities=15% Similarity=0.060 Sum_probs=117.5
Q ss_pred ccccceEEehhHhhc--hhccchhhhhcccCCc--ch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFG--SGDNGTYLGFQCLQIC--RF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTG--fGRTG~~fA~e~~GV~--PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
.+||++||+||++++ +|++|..+. +.+++. || ++|++++| .|++++++++++.+.. ..+
T Consensus 213 ~~~~~~li~De~~~~g~~g~~g~~~~-~~~~~~~~~di~~~s~sK~~~~~---gg~v~~~~~~~~~~~~--------~~~ 280 (409)
T 3kki_A 213 KEFGCALLVDESHSLGTHGPNGAGLL-AELGLTREVHFMTASLAKTFAYR---AGAIWCNNEVNRCVPF--------ISY 280 (409)
T ss_dssp HHHTCEEEEECTTTTTTSSGGGCCHH-HHHTCGGGCSEEEEESSSTTCSS---CEEEEESSSGGGTHHH--------HCH
T ss_pred HHcCCEEEEECCccccccCCCCCcch-hhcCCCCCCCEEEeecchhhCCC---ceEEEECHHHHHHHHH--------hCc
Confidence 467999999999999 999987665 677874 55 36999876 4888999998877653 122
Q ss_pred chhhh--cc-HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh
Q psy7882 76 KLKIS--DT-VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS 147 (329)
Q Consensus 76 g~T~a--gn-lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~ 147 (329)
+.+|+ .+ ++++++++. +.+++ .++++++.++|.+.|+++ .+ .+.+.|.++.+.+.. .
T Consensus 281 ~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~----~~~~~~~~~~~~~~~---------~ 345 (409)
T 3kki_A 281 PAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQL--GL----TIRSESQIIGLETGD---------E 345 (409)
T ss_dssp HHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT--TC----CCCCSSSEEEEEEES---------H
T ss_pred CccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CC----ccCCCCCEEEEEeCC---------H
Confidence 22233 34 666666666 55532 567788888888888765 22 234688899988853 1
Q ss_pred HHHHHHHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 148 RHMTHILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 148 ~~~~~~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.....+.+.|.++||++.+.. ...+.+||.|+... +++||+++++++
T Consensus 346 ~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~---t~e~i~~~~~~l 397 (409)
T 3kki_A 346 RNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDV---NDEQIAKIIEVC 397 (409)
T ss_dssp HHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEccCCC---CHHHHHHHHHHH
Confidence 234568889999999986532 13579999999866 589999999985
No 42
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.22 E-value=7.8e-11 Score=113.65 Aligned_cols=175 Identities=10% Similarity=-0.053 Sum_probs=108.6
Q ss_pred ccccceEEehhHhhchhccch----hhhhc-ccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT----YLGFQ-CLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~----~fA~e-~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..||+++|+||++++|+++|. +.... .++..++ ++|.++ +| +++|++++++++++.+.. ..+
T Consensus 212 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~--------~~~ 282 (429)
T 1yiz_A 212 KKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTG-WKIGWAYGPEALLKNLQM--------VHQ 282 (429)
T ss_dssp HHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGG-GCCEEEESCHHHHHHHHH--------HHH
T ss_pred HHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCC-cceEEEEeCHHHHHHHHH--------HHh
Confidence 357999999999999988764 22221 2344444 689998 67 599999999999887763 233
Q ss_pred chhhhcc-HHHHHHHHh-hH-----H--hH-HHH----HHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC
Q psy7882 76 KLKISDT-VRPHVQIKK-SV-----L--ER-FVH----TYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET 141 (329)
Q Consensus 76 g~T~agn-lA~aaala~-~i-----l--e~-le~----v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~ 141 (329)
..+|+.+ ++++++.+. +. . ++ +++ .+++.++|.+.|+++ +........|+++.+++......
T Consensus 283 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~~ 358 (429)
T 1yiz_A 283 NCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV----GMNPTVPQGGYFMVADWSSLDSK 358 (429)
T ss_dssp TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH----TCEEEECSBSSEEEEECCSSCTT
T ss_pred hcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCcceEEEEEccccccc
Confidence 4567777 666555554 43 2 22 333 444555555555443 33222223477888888532100
Q ss_pred CC-C-C-ChHHHHHHHHHHH-HCCceeeccCC---------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KV-P-L-NSRHMTHILDSCK-EHGLLLGRGGL---------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~-p-~-~~~~~~~~~~~l~-e~GVLl~~~G~---------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.. + . .......+.+.|. ++||++.++.. ..+.+|+.++. ++++|+++++++
T Consensus 359 ~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~-----~~e~i~~~l~~l 422 (429)
T 1yiz_A 359 VDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFK-----KDENLQKAAEIL 422 (429)
T ss_dssp TTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred ccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecC-----CHHHHHHHHHHH
Confidence 00 0 0 0012345777776 79999987421 15799999872 589999999875
No 43
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.17 E-value=1.2e-10 Score=113.23 Aligned_cols=169 Identities=12% Similarity=-0.009 Sum_probs=117.4
Q ss_pred cccccceEEehhHhhch--hccchhhhhcccCCcch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882 4 TYYRDCGVVVSAVDFGS--GDNGTYLGFQCLQICRF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGf--GRTG~~fA~e~~GV~PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~ 74 (329)
..+||++||+||+++++ +++|.. ..+++++.|| ++|+++ .|.|++++++++++.+.. .. ..
T Consensus 220 ~~~~g~~li~Dea~~~~~~~~~g~~-~~~~~~~~~~~di~~~s~sK~~g---~~gG~v~~~~~l~~~l~~--~~----~~ 289 (427)
T 2w8t_A 220 AKKHGAMVLVDEAHSMGFFGPNGRG-VYEAQGLEGQIDFVVGTFSKSVG---TVGGFVVSNHPKFEAVRL--AC----RP 289 (427)
T ss_dssp HHHTTCEEEEECTTTTTTSSTTSCC-HHHHTTCTTCCSEEEEESSSTTC---SCCEEEEECCTTGGGGGG--TC----HH
T ss_pred HHHcCCEEEEECCccccccCCCCCc-hHhhcCCCcCCcEEEecchhhhc---cCCCEEEeCHHHHHHHHH--hc----cc
Confidence 34679999999999984 455554 5677888776 369995 377999999999887753 00 01
Q ss_pred cchhhhcc-HHHHHHHHh-hHHh---H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882 75 HKLKISDT-VRPHVQIKK-SVLE---R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 75 hg~T~agn-lA~aaala~-~ile---~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~ 148 (329)
+..|++.+ ++++++++. +.++ + .+++++++++|.+.|+++ ..+..... +.|.++.+.+.. ..
T Consensus 290 ~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~-~~~~~~~~~~~~---------~~ 357 (427)
T 2w8t_A 290 YIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAM--GFRLGTET-CDSAIVAVMLED---------QE 357 (427)
T ss_dssp HHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH--TCEESCSS-CCSSEEEEEESS---------HH
T ss_pred ccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCcccCCC-CCCCEEEEEECC---------HH
Confidence 11234556 666666555 5442 3 778899999999999886 23222111 267888888742 12
Q ss_pred HHHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
....+.+.|.++||++.+... ..+.+|+.++... +++|++++++++
T Consensus 358 ~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~---t~e~i~~~~~~l 408 (427)
T 2w8t_A 358 QAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEH---TPAQIQTVLGMF 408 (427)
T ss_dssp HHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCCC---CHHHHHHHHHHH
Confidence 356788999999999987531 1358999988755 689999999985
No 44
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.13 E-value=4.4e-10 Score=106.37 Aligned_cols=165 Identities=14% Similarity=0.080 Sum_probs=117.3
Q ss_pred ccccceEEehhHh-hch-hccchhhhhcccCC--cch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVD-FGS-GDNGTYLGFQCLQI--CRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVq-TGf-GRTG~~fA~e~~GV--~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..||+++|+||++ +|+ +++|. +..+.+++ .|| ++|.++ |. |.|.+++++++++.+.. ..+
T Consensus 202 ~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~di~~~s~sK~~~-g~-~gG~~~~~~~~~~~~~~--------~~~ 270 (399)
T 3tqx_A 202 DKYNALVMVDDSHAVGFIGENGR-GTPEYCGVADRVDILTGTLGKALG-GA-SGGYTSGHKEIIEWLRN--------RSR 270 (399)
T ss_dssp HHTTCEEEEECTTTTTTSSTTSC-CHHHHHTCTTCCSEEEEESSSSSC-SS-CCEEEEECHHHHHHHHH--------HCH
T ss_pred HHcCCEEEEECCccccccCCCCC-chHHhhCCCCCCcEEEecchHhcc-cC-ceEEEEcCHHHHHHHHH--------hCc
Confidence 4579999999999 675 56654 35677887 778 469998 53 88999999999887763 111
Q ss_pred ch--hhhcc-HHHHHHHHh-hHH----hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC
Q psy7882 76 KL--KISDT-VRPHVQIKK-SVL----ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN 146 (329)
Q Consensus 76 g~--T~agn-lA~aaala~-~il----e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~ 146 (329)
+. +.+.+ ++++++++. +.+ ++ .++++++.+++.+.|+++ ..+. +...|.++.+.+..
T Consensus 271 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~---~~~~~~~~~~~~~~--------- 336 (399)
T 3tqx_A 271 PYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKL--GFQL---VPGNHPIIPVMLGD--------- 336 (399)
T ss_dssp HHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH--TCCB---CCCSSSEEEEEEEC---------
T ss_pred ceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc--CCCc---CCCCCCEEEEEeCC---------
Confidence 11 22445 666666665 444 22 677888888998888877 2222 26778888888753
Q ss_pred hHHHHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
......+.+.|.++||++.+... ..+.+|+.+++.. +++|++++++++
T Consensus 337 ~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l 389 (399)
T 3tqx_A 337 AQLATNMADHLLQEGIYVVGFSYPVVPMGKARIRVQMSAVH---TQQQLDRAIEAF 389 (399)
T ss_dssp HHHHHHHHHHHHHTTEECCEECTTTSCTTCEEEEEECCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEeeeCCCCCCCCCceEEEEeecCC---CHHHHHHHHHHH
Confidence 12356788999999999986421 2368999998766 589999999975
No 45
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.11 E-value=5.6e-10 Score=106.32 Aligned_cols=167 Identities=13% Similarity=0.039 Sum_probs=117.2
Q ss_pred ccccceEEehhHh-hch-hccchhhhhcccCCcc--h-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVD-FGS-GDNGTYLGFQCLQICR--F-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVq-TGf-GRTG~~fA~e~~GV~P--D-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..+|+++|+||++ +|+ +++|..+ .+.+++.| | ++|.++|+. .|++++++++++.+.. .. ..+
T Consensus 204 ~~~~~~li~De~~~~g~~~~~g~~~-~~~~~~~~~~di~~~s~sK~~~~~~--gG~~~~~~~~~~~l~~--~~----~~~ 274 (401)
T 1fc4_A 204 DKYDALVMVDDSHAVGFVGENGRGS-HEYCDVMGRVDIITGTLGKALGGAS--GGYTAARKEVVEWLRQ--RS----RPY 274 (401)
T ss_dssp HHTTEEEEEECTTTTTTSSTTSCCH-HHHTTCTTCCSEEEEESSSTTCSSS--CEEEEECHHHHHHHHH--HC----HHH
T ss_pred HHcCCEEEEECcccccccCCCCCcc-HHHcCCCcCCcEEEecchhhccCCC--CEEEEcCHHHHHHHHH--hC----cCc
Confidence 3579999999999 598 3677653 45577766 5 469998774 5888899999887763 10 012
Q ss_pred chhhhcc-HHHHHHHHh-hHHh---H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 76 KLKISDT-VRPHVQIKK-SVLE---R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 76 g~T~agn-lA~aaala~-~ile---~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
..+++.+ ++++++++. +.++ + .++++++.++|.+.|+++ ..+.+ .+.|.++.+++.. ...
T Consensus 275 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~---~~~~~~~~~~~~~---------~~~ 340 (401)
T 1fc4_A 275 LFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA--GFTLA---GADHAIIPVMLGD---------AVV 340 (401)
T ss_dssp HHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT--TCCBC---CSSSSEEEEEEEC---------HHH
T ss_pred eeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCccc---CCCCCEEEEEcCC---------hHH
Confidence 2345666 666666655 4443 3 678888889998888875 23322 4678888888842 123
Q ss_pred HHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|.++||++.+... ..+.+|+.+++.. +++|++++++++
T Consensus 341 ~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l 390 (401)
T 1fc4_A 341 AQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAH---TPEQITRAVEAF 390 (401)
T ss_dssp HHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeCCCC---CHHHHHHHHHHH
Confidence 45688889999999987531 1358999988766 589999999985
No 46
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.10 E-value=1.1e-09 Score=102.83 Aligned_cols=161 Identities=10% Similarity=-0.017 Sum_probs=104.2
Q ss_pred cceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
|+++|+||++++|++ |...........+| ++|.++ +| +++|++++++++.+.+.. .. .+|
T Consensus 187 ~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~--------~~--~~~ 254 (363)
T 3ffh_A 187 DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLAS-ARVGYGIADKEIIRQLNI--------VR--PPF 254 (363)
T ss_dssp TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSS-CCCEEEEECHHHHHHHHH--------TC--CSC
T ss_pred CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCch-hceeeeecCHHHHHHHHH--------hC--CCC
Confidence 999999999999987 76554444444455 469998 77 599999999999988764 11 245
Q ss_pred hcc-HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSC 157 (329)
Q Consensus 80 agn-lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l 157 (329)
+.+ ++++++.+. +..+.+++..+.....++.+.+..++++.+..+.+.|.++.+++..+ ...+.+.|
T Consensus 255 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~-----------~~~~~~~l 323 (363)
T 3ffh_A 255 NTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLYPANGNFVLIDLGIE-----------AGTIFSYL 323 (363)
T ss_dssp CCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCCSSEEEEECSSC-----------HHHHHHHH
T ss_pred CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceECCCCCeEEEEECCCC-----------HHHHHHHH
Confidence 566 555444433 21111233333333344444443344333444566788887777421 34578889
Q ss_pred HHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 158 KEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 158 ~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.++||++.++.. .++.+|+.++ +++|++++++++
T Consensus 324 ~~~gi~v~~g~~~~~~~~iRis~~------~~~~i~~~~~~l 359 (363)
T 3ffh_A 324 EKNGYITRSGAALGFPTAVRITIG------KEEDNSAVIALL 359 (363)
T ss_dssp HHTTEECEETTTTTCTTEEEEECC------CHHHHHHHHHHH
T ss_pred HHCCeEEEeCccCCCCCeEEEECC------CHHHHHHHHHHH
Confidence 999999987432 2579999865 579999999875
No 47
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.04 E-value=1.5e-09 Score=102.48 Aligned_cols=169 Identities=7% Similarity=-0.112 Sum_probs=105.5
Q ss_pred ccccceEEehhHhhchhccch-hhhhcccCCc-ch-------HHHhhc-CCccccceeeec-hhHHHhhhhhhhccCCCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT-YLGFQCLQIC-RF-------VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKYQILKTP 73 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~-~fA~e~~GV~-PD-------i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~~~~~~~ 73 (329)
..||+++|+||+++++.++|. ......++.. || ++|+++ +| +++|+++++ +++++.+... .
T Consensus 190 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~-------~ 261 (391)
T 3dzz_A 190 AKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAA-LHAACAIIPNPDLRARAEES-------F 261 (391)
T ss_dssp HHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTT-TCCEEEECCSHHHHHHHHHH-------H
T ss_pred HHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccc-hhheEEEECCHHHHHHHHHH-------H
Confidence 467999999999999988874 3344444432 77 469997 77 499999997 8888877641 0
Q ss_pred ccchhhhcc-HHHHHHHHh-h----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecCCCCCCCC
Q psy7882 74 AHKLKISDT-VRPHVQIKK-S----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQDKETKVPL 145 (329)
Q Consensus 74 ~hg~T~agn-lA~aaala~-~----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d~~~~~p~ 145 (329)
.+..+++.+ ++++++.+. + .+++ .++.++..++|.+.|++. .|.+.-+...| .+..+.+.....
T Consensus 262 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~----- 333 (391)
T 3dzz_A 262 FLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKE---VPEVKVLDSNASYLAWVDISALGM----- 333 (391)
T ss_dssp HHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTSEECCCCBSSEEEEECGGGCS-----
T ss_pred HhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhh---CCCcEEeccCceEEEEEehhhcCC-----
Confidence 112334555 554444433 2 2333 455566666666666552 33333233334 444466643110
Q ss_pred ChHHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 146 NSRHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 146 ~~~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
....+.+.|+ ++||++.++.. ..+.+|+.+. . ++++++++++++
T Consensus 334 ---~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~---~~~~i~~~l~~l 382 (391)
T 3dzz_A 334 ---NAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA--C---PKELVIDGMQRL 382 (391)
T ss_dssp ---CHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC--S---CHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--C---CHHHHHHHHHHH
Confidence 1345788886 89999987421 2478999876 2 589999999875
No 48
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.03 E-value=1.2e-09 Score=103.22 Aligned_cols=168 Identities=8% Similarity=-0.056 Sum_probs=104.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch----------HHHhhc-CCccccceeeech-hHHHhhhhhhhccCCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF----------VQKDFK-GSFWDKLIVHTST-CTFENFIKIKYQILKT 72 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD----------i~KaLg-GG~~PigAv~~~~-eI~d~~~~~~~~~~~~ 72 (329)
..||+++|+||++++|.++|..+ .....+.|| ++|+++ +| +++|+++++. ++++.+...
T Consensus 194 ~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~------- 264 (391)
T 4dq6_A 194 LKHNVKIISDEIHSDIILKKHKH-IPMASISKEFEKNTITCMAPTKTFNIAG-LQSSYVVLPDEKDYKLLDDA------- 264 (391)
T ss_dssp HHTTCEEEEECTTTTCBCTTCCC-CCGGGSCHHHHHTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHH-------
T ss_pred HHcCCEEEeeccccccccCCCCc-cCHHHcCccccCcEEEEEechhhccCcc-cceEEEEeCCHHHHHHHHHH-------
Confidence 45799999999999998877422 112223332 579997 66 5999999886 888776530
Q ss_pred Cccchhhhcc-HHHHHHHHh-hH----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeE-EEeecCCCCCCC
Q psy7882 73 PAHKLKISDT-VRPHVQIKK-SV----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIG-VDLVQDKETKVP 144 (329)
Q Consensus 73 ~~hg~T~agn-lA~aaala~-~i----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~g-Ief~~d~~~~~p 144 (329)
..+..+++.+ ++++++.+. +. +++ .++.++..+++.+.|++. .|.+..++..|.++. +++.....
T Consensus 265 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~---- 337 (391)
T 4dq6_A 265 FTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINEN---MPKLKVRKPEGTYLLWVDFSALGL---- 337 (391)
T ss_dssp HHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTSEECCCSBSSEEEEECGGGCC----
T ss_pred HHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhh---CCCCEecCCCccEEEEEEhhhcCC----
Confidence 1122344566 555554443 22 222 344455555555555442 344444556666655 77753110
Q ss_pred CChHHHHHHHHHHHHC-CceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 145 LNSRHMTHILDSCKEH-GLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 145 ~~~~~~~~~~~~l~e~-GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
-...+.+.|.++ ||++.++. ...+.+|+.++ . ++++++++++++
T Consensus 338 ----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~---~~~~i~~~l~~l 386 (391)
T 4dq6_A 338 ----SDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA--C---PRSMLEEALIRI 386 (391)
T ss_dssp ----CHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC--S---CHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc--C---CHHHHHHHHHHH
Confidence 134688889888 99998742 13488999877 2 578999999875
No 49
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.03 E-value=1.5e-09 Score=102.37 Aligned_cols=170 Identities=12% Similarity=-0.048 Sum_probs=109.9
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
..||+++|.||+++++++.+.....+.++..++ ++|+++ +| +++|.+++++++++.+.. ..+..+++
T Consensus 184 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~v~~~~~l~~~~~~--------~~~~~~~~ 254 (375)
T 3op7_A 184 SEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSKTYSLPG-IRIGWVAANHQVTDILRD--------YRDYTMIC 254 (375)
T ss_dssp HTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEESSSSSSCGG-GCCEEEECCHHHHHHHTT--------TGGGTTSC
T ss_pred HHcCCEEEEEcccccccccCCCchhhhcCCEEEEeEChhhcCCcc-cceEEEEeCHHHHHHHHH--------HHhhhccC
Confidence 468999999999999987754444566777777 679998 67 599999999999987753 34455666
Q ss_pred cc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 81 DT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 81 gn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
.+ ++++++.+. +..++ +++..+.....++.+.+..++++.+..++..| .+..+.+..+. + ...+...
T Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~ 325 (375)
T 3op7_A 255 AGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDM------P---MEDFCLQ 325 (375)
T ss_dssp CCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSS------C---HHHHHHH
T ss_pred CCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCC------C---HHHHHHH
Confidence 66 665555444 33332 44454444455555555555566555555544 34445553211 1 2446666
Q ss_pred H-HHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 C-KEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l-~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+ .++||++.++.. ..+.+|+.. .. +.++|+++++++
T Consensus 326 ll~~~gi~v~~g~~~~~~~~iRi~~--~~---~~~~i~~~l~~l 364 (375)
T 3op7_A 326 LLQEHGVLLVPGNRFERDGYVRLGF--AC---EQETLIKGLEKL 364 (375)
T ss_dssp HHHHHCEECEEGGGGTCTTEEEECC--CS---CHHHHHHHHHHH
T ss_pred HHHhCCEEEeChhhhCCCCeEEEEe--cC---CHHHHHHHHHHH
Confidence 6 589999987532 257888863 33 358899999875
No 50
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.02 E-value=3.5e-09 Score=98.97 Aligned_cols=165 Identities=6% Similarity=-0.079 Sum_probs=107.7
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceee-echhHHHhhhhhhhccCCCCccch
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVH-TSTCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~-~~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
.||+++|+||+++++.+.+........+..++ ++|.++ +| +++|+++ +++++++.+.. ...
T Consensus 175 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~g~~~~~~~~~~~~~~~----------~~~ 243 (361)
T 3ftb_A 175 EKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPG-IRFGYGITNNKEIAAKIKA----------KQN 243 (361)
T ss_dssp HHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGG-GCCEEEEESCHHHHHHHHT----------TSC
T ss_pred hcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCC-cceeEEEeCCHHHHHHHHh----------hCC
Confidence 67999999999999987522233333343343 469998 66 5999988 89898887763 122
Q ss_pred hhhcc-HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCcee-eEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 78 KISDT-VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVG-DVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 78 T~agn-lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
+++.+ ++++++.+. +..+.+++..+.....++.+.+..+++|.+. .+++.|.++.+++.. . + ...+.
T Consensus 244 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~------~---~~~l~ 313 (361)
T 3ftb_A 244 PWNINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLEN-I------S---GEKLY 313 (361)
T ss_dssp TTCSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCSSSEEEEEESS-S------C---HHHHH
T ss_pred CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCeEEEEEcCC-C------C---HHHHH
Confidence 45666 666555554 2111134444444445555555445567666 677889888888753 1 1 34588
Q ss_pred HHHHHCCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.|.++||++.++. ...+.+|+.++ +.+|++++++++
T Consensus 314 ~~l~~~gi~v~~g~~~~~~~~~~iRis~~------~~~~~~~l~~~l 354 (361)
T 3ftb_A 314 DSLLKEDIVIRRCCNFIGLDDSFVRFAIK------DEKKNTKFLRAL 354 (361)
T ss_dssp HHHHTTTEECEECTTSTTCCTTEEEEECC------CHHHHHHHHHHH
T ss_pred HHHHHCCeEEeeCccCCCCCCCEEEEEcC------CHHHHHHHHHHH
Confidence 88999999998743 12578999875 467777777764
No 51
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.02 E-value=2.9e-09 Score=100.71 Aligned_cols=164 Identities=5% Similarity=-0.111 Sum_probs=102.1
Q ss_pred ccccceEEehhHhhchhccchhh-hhcccC---Ccch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQ---ICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~G---V~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
.+||+++|.||++++|.+.|... ..+..+ ...+ ++|.++ +| +++|++++++++++.+.. ..+.
T Consensus 188 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~--------~~~~ 258 (376)
T 2dou_A 188 RKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAG-FRLGFALGSEEALARLER--------VKGV 258 (376)
T ss_dssp HHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGG-GCCEEEEECHHHHHHHHH--------HHHH
T ss_pred HHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChh-heeEEEecCHHHHHHHHH--------HHHh
Confidence 35799999999999997766321 122222 2233 679997 67 599999999999887764 2233
Q ss_pred hhhhcc-HHHHHHHHh-hH----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChH
Q psy7882 77 LKISDT-VRPHVQIKK-SV----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 77 ~T~agn-lA~aaala~-~i----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~ 148 (329)
.+++.+ ++++++.+. +. +++ .++.++..++|.+.|++ + +.-++. -|+++.+++... .+
T Consensus 259 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~--~~~~~~~~~~~~~~~~~~~------~~-- 324 (376)
T 2dou_A 259 IDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKG----V--LSLLPPRATMYLWGRLPEG------VD-- 324 (376)
T ss_dssp HCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTT----T--SEECCCCBSSEEEEECCTT------CC--
T ss_pred cccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----h--cCccCCCeeEEEEEECCCC------CC--
Confidence 445556 555554443 22 222 33344444444444433 3 222223 366777887421 11
Q ss_pred HHHHHHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|.++||++.++.. ..+.+|+.+.. ++++++++++.+
T Consensus 325 -~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~~-----~~~~i~~~l~~l 371 (376)
T 2dou_A 325 -DLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVR-----PLEELLEAAKRI 371 (376)
T ss_dssp -HHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred -HHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEecC-----CHHHHHHHHHHH
Confidence 24588889999999987421 25789999863 478999999874
No 52
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.02 E-value=7.3e-10 Score=105.74 Aligned_cols=168 Identities=13% Similarity=0.010 Sum_probs=105.9
Q ss_pred ccccceEEehhHhhchhccchh-hhhcccCCc---ch------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQIC---RF------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~---PD------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~ 74 (329)
.+||+++|+||++++++++|.. .....++.. ++ ++|.+++| +++|++++++++.+.+.. ..
T Consensus 193 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~l~~--------~~ 263 (397)
T 2zyj_A 193 MERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPG-LRVAFAVAHPEALQKLVQ--------AK 263 (397)
T ss_dssp HHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGG-GCCEEEECCHHHHHHHHH--------HH
T ss_pred HHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccccc-ceeEEEecCHHHHHHHHH--------HH
Confidence 3579999999999999877752 223333333 33 46999977 499999999999887763 23
Q ss_pred cchhhhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHHHHHHHhCC-ceeeE-EeeceeeEEEeecCCCCCCC
Q psy7882 75 HKLKISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHLSKLREEFA-IVGDV-RGKGLMIGVDLVQDKETKVP 144 (329)
Q Consensus 75 hg~T~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL~eL~~~~p-~v~~V-RG~GLm~gIef~~d~~~~~p 144 (329)
++.+++.+ ++++++.+. +. +++ .++.++..++|.+.|++. .| .+..+ .+.|.++.+++..+
T Consensus 264 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~g~~~~~~~~g~~~~~~~~~~------ 334 (397)
T 2zyj_A 264 QGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDRE---VPKEVRYTRPKGGMFVWMELPKG------ 334 (397)
T ss_dssp HHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH---SCTTSEECCCSBSSEEEEECSTT------
T ss_pred HhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCeEEccCCccEEEEEEcCCC------
Confidence 34555556 555554433 21 111 233334444444444432 33 13222 24577888887431
Q ss_pred CChHHHHHHHHHHHHCCceeeccCC------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 145 LNSRHMTHILDSCKEHGLLLGRGGL------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 145 ~~~~~~~~~~~~l~e~GVLl~~~G~------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+ ...+.+.|.++||++.++.. ..+.+|+.++.. +++|++++++++
T Consensus 335 ~~---~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~----~~~~i~~~~~~l 386 (397)
T 2zyj_A 335 LS---AEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATL----DREGIAEGVRRL 386 (397)
T ss_dssp CC---HHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSSS----CHHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCCC----CHHHHHHHHHHH
Confidence 11 34688889999999987421 357899998763 589999999975
No 53
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.01 E-value=2e-09 Score=101.22 Aligned_cols=169 Identities=9% Similarity=-0.039 Sum_probs=105.2
Q ss_pred ccccceEEehhHhhchhccchhh-hhcc-----cCCcch---HHHhhc-CCccccceeee-chhHHHhhhhhhhccCCCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYL-GFQC-----LQICRF---VQKDFK-GSFWDKLIVHT-STCTFENFIKIKYQILKTP 73 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~-----~GV~PD---i~KaLg-GG~~PigAv~~-~~eI~d~~~~~~~~~~~~~ 73 (329)
..||+++|+||++++++++|..+ .... .+..++ ++|.++ +| +++|++++ ++++++.+... .
T Consensus 186 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~-------~ 257 (383)
T 3kax_A 186 TKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAG-LQASIIIIPNEKLRQAFTSI-------Q 257 (383)
T ss_dssp HHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHH-------H
T ss_pred HHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcc-hhheEEEeCCHHHHHHHHHH-------H
Confidence 45799999999999998887421 1111 233344 579998 77 59999988 68888876530 0
Q ss_pred ccchhhhcc-HHHHHHHHh-hH----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeE-EEeecCCCCCCCC
Q psy7882 74 AHKLKISDT-VRPHVQIKK-SV----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIG-VDLVQDKETKVPL 145 (329)
Q Consensus 74 ~hg~T~agn-lA~aaala~-~i----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~g-Ief~~d~~~~~p~ 145 (329)
.+..+++.+ ++++++.+. +. +++ .++.++..+++.+.|++. .|.+..++..|.++. +++.... .
T Consensus 258 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~ 329 (383)
T 3kax_A 258 YRQGFHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDH---IPTLSVMKPEGSFLLWIDCSALN-----L 329 (383)
T ss_dssp HHTTCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTCEECCCSBSSEEEEECGGGC-----C
T ss_pred hhcccCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhh---CCCceEecCCceEEEEEEccccC-----C
Confidence 112234556 666555544 22 332 445555566666665542 344444455565555 7775311 0
Q ss_pred ChHHHHHHHHHHH-HCCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 146 NSRHMTHILDSCK-EHGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 146 ~~~~~~~~~~~l~-e~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
-...+...|. ++||++.++. ...+.+|+.+. . ++++|+++++++
T Consensus 330 ---~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~--~---~~~~i~~~l~~l 378 (383)
T 3kax_A 330 ---SQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG--C---PRSVLEEILNRL 378 (383)
T ss_dssp ---CHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECS--S---CHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEc--C---CHHHHHHHHHHH
Confidence 1346788887 6899998742 13488999865 2 578999999875
No 54
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.00 E-value=1.9e-09 Score=102.53 Aligned_cols=169 Identities=9% Similarity=-0.006 Sum_probs=104.0
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
..||+++|+||++++|.++|....... ..++ ++|.++ .| +++|.+++++++.+.+.. ..+..
T Consensus 191 ~~~~~~li~De~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~--------~~~~~ 259 (391)
T 3h14_A 191 QAQGASFISDEIYHGIEYEAKAVTALE--LTDECYVINSFSKYFSMTG-WRVGWMVVPEDQVRVVER--------IAQNM 259 (391)
T ss_dssp HHTTCEEEEECTTTTCBSSSCCCCGGG--TCSSSEEEEESSSTTCCTT-SCCEEEECCGGGHHHHHH--------HHHHT
T ss_pred HHcCCEEEEECcchhcccCCCCcChhh--cCCCEEEEEechhccCCcc-ceeEEEEeCHHHHHHHHH--------HHhhh
Confidence 357999999999999988775322222 2333 469998 77 499999999999887763 23445
Q ss_pred hhhcc-HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 78 KISDT-VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 78 T~agn-lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
+++.+ ++++++++. +..+.+++..+.....++.+.+..++++....++..| ++..+++..... ....+.
T Consensus 260 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 331 (391)
T 3h14_A 260 FICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTD--------DSRAFA 331 (391)
T ss_dssp TCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTCS--------CHHHHH
T ss_pred ccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccCC--------CHHHHH
Confidence 56666 555555443 3101133333333344444444333445443344444 666667642110 134577
Q ss_pred HHHHHC-CceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEH-GLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~-GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..|+++ ||++.++.. ..+.+|+.++. +++||+++++++
T Consensus 332 ~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-----~~~~i~~~l~~l 375 (391)
T 3h14_A 332 AEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-----ATADIEEGLDRL 375 (391)
T ss_dssp HHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-----CHHHHHHHHHHH
T ss_pred HHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-----CHHHHHHHHHHH
Confidence 787775 999987421 25689998775 468999999875
No 55
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.00 E-value=3e-09 Score=100.92 Aligned_cols=168 Identities=10% Similarity=-0.068 Sum_probs=102.4
Q ss_pred ccccceEEehhHhhchhccch----hhhhc-ccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT----YLGFQ-CLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~----~fA~e-~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..||+++|+||++++|.++|. ++... .++.... ++|.++ .| +++|++++++++++.+.. ..+
T Consensus 193 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~--------~~~ 263 (386)
T 1u08_A 193 AGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTG-WKVGYCVAPAPISAEIRK--------VHQ 263 (386)
T ss_dssp TTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGG-GCCEEEECCHHHHHHHHH--------HHH
T ss_pred HHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcc-cceEEEEcCHHHHHHHHH--------HHH
Confidence 467999999999999877663 22222 2344444 679998 67 599999999999887753 223
Q ss_pred chhhhcc-HHHHHHHHh-h----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882 76 KLKISDT-VRPHVQIKK-S----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 76 g~T~agn-lA~aaala~-~----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~ 148 (329)
..+|+.+ ++++++.+. + .+++ .+++++..++|.+.|++ ++.......-|+++.+++..... .+
T Consensus 264 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~~----~~-- 333 (386)
T 1u08_A 264 YLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNE----SRLEILPCEGTYFLLVDYSAVST----LD-- 333 (386)
T ss_dssp HHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTS----SSCEECCCCBSSEEEEECTTTCC----SC--
T ss_pred hhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH----CCCeecCCCceEEEEEecCCCCC----CC--
Confidence 3455555 544443332 2 2222 34445555555554443 33211111236778888742100 01
Q ss_pred HHHHHHHHHH-HCCceeeccC------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCK-EHGLLLGRGG------LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~-e~GVLl~~~G------~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.+. ++||++.++. ...+.+|+.++. +++||+++++++
T Consensus 334 -~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~-----~~~~i~~~~~~l 383 (386)
T 1u08_A 334 -DVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK-----KESTLLAAAERL 383 (386)
T ss_dssp -HHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS-----CHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC-----CHHHHHHHHHHH
Confidence 245777776 6899998742 135789998862 589999999874
No 56
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.99 E-value=1.2e-09 Score=105.80 Aligned_cols=171 Identities=11% Similarity=-0.023 Sum_probs=108.5
Q ss_pred ccccceEEehhHhhchhccchh-hhhcccCCcch------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
..+|+++|+||++++|.++|.. .....++..++ ++|.+++| +++|++++++++++.+.. ..+..
T Consensus 218 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~l~~--------~~~~~ 288 (425)
T 1vp4_A 218 EKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPG-LRIGMVAGSKEFIRKIVQ--------AKQSA 288 (425)
T ss_dssp HHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGG-GCEEEEECCHHHHHHHHH--------HHHHH
T ss_pred HHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccccc-cceEEEeeCHHHHHHHHH--------Hhhhh
Confidence 3579999999999999776642 22222222222 56999977 599999999999887763 22344
Q ss_pred hhhcc-HHHHHHHHh-hH------HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCCh
Q psy7882 78 KISDT-VRPHVQIKK-SV------LER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLNS 147 (329)
Q Consensus 78 T~agn-lA~aaala~-~i------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~~ 147 (329)
+++.+ ++++++.+. +. +++ .++.++..++|.+.|+++...++.+..+ .+.|.++.+++..+. +
T Consensus 289 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~------~- 361 (425)
T 1vp4_A 289 DLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGF------D- 361 (425)
T ss_dssp HSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTC------C-
T ss_pred cCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCC------C-
Confidence 55556 555554443 22 222 3445566666777666542221123222 345778888885311 1
Q ss_pred HHHHHHHHHHHHCCceeeccCC------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 148 RHMTHILDSCKEHGLLLGRGGL------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 148 ~~~~~~~~~l~e~GVLl~~~G~------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|.++||++.++.. ..+.+|+.++.. +++|++++++++
T Consensus 362 --~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~----~~e~i~~~l~~l 411 (425)
T 1vp4_A 362 --TWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLP----PDEKIVEGIKRL 411 (425)
T ss_dssp --TTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSS----CHHHHHHHHHHH
T ss_pred --HHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCC----CHHHHHHHHHHH
Confidence 12367788888999987421 257899998763 589999999985
No 57
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=98.99 E-value=2.2e-09 Score=100.92 Aligned_cols=167 Identities=11% Similarity=0.031 Sum_probs=103.5
Q ss_pred ccccceEEehhHhhchhccc-----hhhhhcccCCcch---HHHhhc-CCccccceee-echhHHHhhhhhhhccCCCCc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNG-----TYLGFQCLQICRF---VQKDFK-GSFWDKLIVH-TSTCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG-----~~fA~e~~GV~PD---i~KaLg-GG~~PigAv~-~~~eI~d~~~~~~~~~~~~~~ 74 (329)
..||+++|+||++++++++| .++.....+...+ ++|+++ +| +++|.++ .++++++.+.. ..
T Consensus 180 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~--------~~ 250 (377)
T 3fdb_A 180 HRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAG-LKCAQIIFSNPSDAEHWQQ--------LS 250 (377)
T ss_dssp HHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGG-GCCEEEECCSHHHHHHHHH--------SC
T ss_pred HHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcc-hhheEEEeCCHHHHHHHHH--------HH
Confidence 36799999999999998887 3333322333344 579996 66 5999554 57888887763 34
Q ss_pred cchhhhcc-HHHHHHHHh-hH----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceee-EEEeecCCCCCCCCC
Q psy7882 75 HKLKISDT-VRPHVQIKK-SV----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMI-GVDLVQDKETKVPLN 146 (329)
Q Consensus 75 hg~T~agn-lA~aaala~-~i----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~-gIef~~d~~~~~p~~ 146 (329)
+..+++.+ ++++++.+. +. +++ .++.++..++|.+.|++. .|.+.-+...|.++ .+++..... +
T Consensus 251 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~ 322 (377)
T 3fdb_A 251 PVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKR---IPGAKITPMQATYLMWIDFRDTTI-----E 322 (377)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH---STTCEECCCSBCSEEEEECTTSCC-----C
T ss_pred HhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhh---CCCceEecCCeeEEEEEECcccCC-----C
Confidence 55667777 666555444 22 222 445556666666665543 34333344444444 577743111 1
Q ss_pred hHHHHHHHHHHHHC-CceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCKEH-GLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~e~-GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+...++++ ||++.++.. ..+.+|+.+.. ++++|+++++++
T Consensus 323 ----~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-----~~e~i~~~l~~l 369 (377)
T 3fdb_A 323 ----GSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-----SREVLEEAIDRM 369 (377)
T ss_dssp ----SCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred ----HHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC-----CHHHHHHHHHHH
Confidence 1256666665 999987431 25889998762 578999999875
No 58
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=98.99 E-value=2.5e-09 Score=102.69 Aligned_cols=168 Identities=8% Similarity=-0.113 Sum_probs=103.8
Q ss_pred ccccceEEehhHhhchhccchh-hhhcc----cCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTY-LGFQC----LQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~----~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..+|+++|+||++++++++|.. ..... ++.... ++|.++ .| +++|++++++++++.+.. ..+
T Consensus 190 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~--------~~~ 260 (411)
T 2o0r_A 190 VAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTG-WKIGWACGPAELIAGVRA--------AKQ 260 (411)
T ss_dssp HHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTT-TCEEEEECCHHHHHHHHH--------HHH
T ss_pred HHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCcc-ceEEEEeeCHHHHHHHHH--------HHh
Confidence 3579999999999999877642 22222 222232 679998 77 599999999999887753 122
Q ss_pred chhhhcc-HHHHH---HHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882 76 KLKISDT-VRPHV---QIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 76 g~T~agn-lA~aa---ala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~ 148 (329)
..+++.+ +++++ +++. +.+++ .++++++.++|.+.|+++ +........|+++.+++..... .+
T Consensus 261 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~----~~-- 330 (411)
T 2o0r_A 261 YLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEI----GFAVHDSYGTYFLCADPRPLGY----DD-- 330 (411)
T ss_dssp HHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH----TCEECCCCBSSEEEEECGGGTC----CC--
T ss_pred hccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc----CCEecCCCeeEEEEEecCCCCC----CC--
Confidence 3344554 44333 3332 22333 456667777777777664 2211112347778888753100 01
Q ss_pred HHHHHHHHHH-HCCceeeccCC---------------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCK-EHGLLLGRGGL---------------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~-e~GVLl~~~G~---------------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+...|. ++||++.++.. ..+.+||.+. . +++|++++++++
T Consensus 331 -~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~--~---~~e~i~~~~~~l 389 (411)
T 2o0r_A 331 -STEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC--K---RDDTLDEAIRRL 389 (411)
T ss_dssp -HHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC--S---CHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec--C---CHHHHHHHHHHH
Confidence 245777776 68999976421 2467999874 2 578999999975
No 59
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=98.96 E-value=2.3e-09 Score=101.05 Aligned_cols=163 Identities=6% Similarity=-0.094 Sum_probs=102.7
Q ss_pred ccccceEEehhHhhchhccchhhhhc---------ccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQ---------CLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILK 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e---------~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~ 71 (329)
..||+++|+||++++|.++|...... .++...+ ++|.++ +| +++|.+++++++++.+..
T Consensus 184 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~------- 255 (376)
T 3ezs_A 184 LKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPG-LRSGFIAGDSRLLEKYKA------- 255 (376)
T ss_dssp HHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHH-------
T ss_pred HHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCcc-ceeEEEeeCHHHHHHHHH-------
Confidence 35799999999999998877443322 2344444 579996 67 599999999999988764
Q ss_pred CCccchhhhcc-HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 72 TPAHKLKISDT-VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 72 ~~~hg~T~agn-lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
..+..+++.+ ++++++.+. +..+.+++..+.....++.+.+..+ +. . ..+.|.++.+++. +
T Consensus 256 -~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~--~~-~-~~~~~~~~~~~~~-~----------- 318 (376)
T 3ezs_A 256 -FRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK--NT-L-IYPYSFYVYLPVQ-N----------- 318 (376)
T ss_dssp -HHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST--TC-C-CCSBSSEEEEECS-C-----------
T ss_pred -HHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc--CC-C-CCCcceEEEEECC-C-----------
Confidence 2334456666 555444433 2111122233333333333333222 22 1 4566788877774 1
Q ss_pred HHHHHHHHHH-CCceeeccC------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKE-HGLLLGRGG------LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e-~GVLl~~~G------~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+...|.+ +||++.++. ...+.+|+.++. +++|++++++++
T Consensus 319 ~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~-----~~~~i~~~l~~l 368 (376)
T 3ezs_A 319 GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY-----DTPLLEKPLEII 368 (376)
T ss_dssp HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-----CHHHHHHHHHHH
Confidence 2457788887 899998742 245899998762 589999999975
No 60
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=98.96 E-value=6.8e-09 Score=97.63 Aligned_cols=164 Identities=10% Similarity=-0.092 Sum_probs=105.0
Q ss_pred ccc--cceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 5 YYR--DCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 5 ~~~--giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
..| |+++|+||++++|+..+.....+.++...+ ++|...+| +++|++++++++++.+.. . ..+|
T Consensus 187 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~~~~--------~--~~~~ 255 (367)
T 3euc_A 187 QGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKLGLAG-IRLGYVAGDPQWLEQLDK--------V--RPPY 255 (367)
T ss_dssp BTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCTTSCS-CCEEEEEECHHHHHHHGG--------G--CCSS
T ss_pred hhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhhcccc-cCceeeeeCHHHHHHHHH--------h--CCCC
Confidence 456 899999999999976665555555555555 56995566 599999999999887753 1 1234
Q ss_pred hcc-HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHH
Q psy7882 80 SDT-VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSC 157 (329)
Q Consensus 80 agn-lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l 157 (329)
+.+ ++++++.+. +..+.+++..+.....++.|.+..+++|.+..+.+.|.++.+.+. + ...+.+.|
T Consensus 256 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~-~-----------~~~l~~~l 323 (367)
T 3euc_A 256 NVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSAANFLLARVP-D-----------AAQTFDRL 323 (367)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEECCCSSSEEEEECS-C-----------HHHHHHHH
T ss_pred CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCeEEEEECC-C-----------HHHHHHHH
Confidence 555 555444443 221112333333333444444433445544445567778777764 1 24577788
Q ss_pred HHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 158 KEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 158 ~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.++||++.+... ..+.+|+... +++|++++++++
T Consensus 324 ~~~gi~v~~~~~~~~~~~~~iRis~~------~~~~i~~~~~~l 361 (367)
T 3euc_A 324 LARKVLIKNVSKMHPLLANCLRVTVS------TPEENAQFLEAF 361 (367)
T ss_dssp HTTTEECEECGGGCGGGTTEEEEECC------CHHHHHHHHHHH
T ss_pred HHCCeEEEECCccCCCCCCEEEEecC------CHHHHHHHHHHH
Confidence 999999987532 3578999843 589999999975
No 61
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=98.96 E-value=5.4e-09 Score=102.20 Aligned_cols=174 Identities=11% Similarity=-0.026 Sum_probs=108.3
Q ss_pred ccccceEEehhHhhchhccch---hhhh--cccCCcch---HHHhhc-CCccccceeee-chhHHHhhhhhhhccCCCCc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT---YLGF--QCLQICRF---VQKDFK-GSFWDKLIVHT-STCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~---~fA~--e~~GV~PD---i~KaLg-GG~~PigAv~~-~~eI~d~~~~~~~~~~~~~~ 74 (329)
..||+++|.|||++++.++|. +.++ +.++..++ ++|.++ .| +++|.+++ ++++++.+.. ..
T Consensus 231 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G-~riG~~~~~~~~l~~~l~~--------~~ 301 (447)
T 3b46_A 231 VKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATG-WRIGWVLSLNAELLSYAAK--------AH 301 (447)
T ss_dssp HHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTT-SCCEEEECSCHHHHHHHHH--------HH
T ss_pred HHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcc-hhhEEEEeCCHHHHHHHHH--------HH
Confidence 367999999999999987763 2222 13455555 689998 77 49999999 9999887753 22
Q ss_pred cchhhhcc-HHHHHHHHh-hH------HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCC
Q psy7882 75 HKLKISDT-VRPHVQIKK-SV------LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPL 145 (329)
Q Consensus 75 hg~T~agn-lA~aaala~-~i------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~ 145 (329)
+..+|+.+ ++++++.+. +. +++ .++.++..++|.+.|+++ +.......-|+++.+++...... ..+
T Consensus 302 ~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~p-~~~ 376 (447)
T 3b46_A 302 TRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL----GLPYTAPEGTYFVLVDFSKVKIP-EDY 376 (447)
T ss_dssp HHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH----TCCEECCSBSSEEEEECTTCCCC-TTC
T ss_pred hhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC----CCeecCCCeeEEEEEecccccCc-ccc
Confidence 34556666 444443333 22 222 445666666676666664 32111234578888887431000 000
Q ss_pred C-------hHHHHHHHHHHH-HCCceeeccCC---------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 146 N-------SRHMTHILDSCK-EHGLLLGRGGL---------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 146 ~-------~~~~~~~~~~l~-e~GVLl~~~G~---------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+ ......+...|. ++||++.++.. ..+.+||.++. ++++|+++++.+
T Consensus 377 ~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~-----~~e~l~~~~~~l 440 (447)
T 3b46_A 377 PYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCK-----DDAYLENAVERL 440 (447)
T ss_dssp CCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCS-----CHHHHHHHHHHG
T ss_pred ccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeC-----CHHHHHHHHHHH
Confidence 0 012346777776 58999987521 15789999862 579999999986
No 62
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=98.95 E-value=9.7e-09 Score=96.26 Aligned_cols=170 Identities=7% Similarity=-0.045 Sum_probs=105.9
Q ss_pred ccccceEEehhHhhchhc--cch---------hhhhcccCCcch---HHHhhcCCccccceeeechhHH-Hhhhhhhhcc
Q psy7882 5 YYRDCGVVVSAVDFGSGD--NGT---------YLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTF-ENFIKIKYQI 69 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGR--TG~---------~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~-d~~~~~~~~~ 69 (329)
..||+++|+||+++|+.. +|. .+..+. ++.+. ..|.+++|. ++|+++++++.+ +.+.. ....
T Consensus 198 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~-~~g~~~~~~~~~~~~~~~-~~~~ 274 (397)
T 3f9t_A 198 KENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGHCPI-PSGGILFKDIGYKRYLDV-DAPY 274 (397)
T ss_dssp HHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTCCCS-SCEEEEESSGGGGGGTCE-ECTT
T ss_pred HHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccCCCC-CceEEEEeCHHHHHhhcc-CCcc
Confidence 457999999999998533 443 333344 55555 469988875 999988876643 22211 0000
Q ss_pred C----CCCccchhhhcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCC
Q psy7882 70 L----KTPAHKLKISDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKE 140 (329)
Q Consensus 70 ~----~~~~hg~T~agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~ 140 (329)
. ....++++.+.+ +++.++++. +-+++ .++..++.+++.+.|+++ ..+.+.. ..+.++.+.+..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~--~~~~~~~~~~~~--- 347 (397)
T 3f9t_A 275 LTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN--NFKPVIE--PILNIVAIEDED--- 347 (397)
T ss_dssp SSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCCBSSC--CSSSEEEEECTT---
T ss_pred ccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC--CCEEEcC--CCccEEEEEeCC---
Confidence 0 001123333345 555555543 22333 677888888888888876 3443332 234444444321
Q ss_pred CCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 141 TKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 141 ~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|.++||++.++. .++.+|+.+++.+ +++|++++++++
T Consensus 348 ---------~~~~~~~l~~~gi~v~~~~-~~~~~Ri~~~~~~---~~e~i~~~~~~l 391 (397)
T 3f9t_A 348 ---------YKEVCKKLRDRGIYVSVCN-CVKALRIVVMPHI---KREHIDNFIEIL 391 (397)
T ss_dssp ---------HHHHHHHHHHTTCBCEECS-SSSEEEEECCTTC---CHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHhCCeEEeccC-CCCEEEEEEcCCC---CHHHHHHHHHHH
Confidence 3468888999999998854 3689999998766 589999999975
No 63
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=98.94 E-value=2.6e-09 Score=101.94 Aligned_cols=168 Identities=8% Similarity=0.008 Sum_probs=105.6
Q ss_pred ccccceEEehhHhhchhccchh-hhhcccCCc---ch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQIC---RF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~---PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
..||+++|+||+++++.++|.. .....++.. .+ ++|.++.|+ ++|++++++++++.+.. ..+..
T Consensus 205 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~-r~G~~~~~~~~~~~~~~--------~~~~~ 275 (407)
T 2zc0_A 205 SKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGF-RIGWIIAEGEILKKVLM--------QKQPI 275 (407)
T ss_dssp HHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTS-CCEEEECCHHHHHHHHH--------HHTTT
T ss_pred HHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccCCCc-ceEEEecCHHHHHHHHH--------HHHhh
Confidence 3579999999999999776652 223333322 23 579999884 99999999999887764 12233
Q ss_pred hhhcc-HHHHHHHHh-hH--Hh-H-----HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCC
Q psy7882 78 KISDT-VRPHVQIKK-SV--LE-R-----FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLN 146 (329)
Q Consensus 78 T~agn-lA~aaala~-~i--le-~-----le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~ 146 (329)
+++.+ ++++++.+. +. ++ + .++.++..++|.+.|++. .|.+.-+ ...|+++.+.+..+ .+
T Consensus 276 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~------~~ 346 (407)
T 2zc0_A 276 DFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENH---LPNAEFTKPIAGMFVMFFLPEG------AD 346 (407)
T ss_dssp TSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHH---CTTSCBCCCSBSSEEEEECSTT------CC
T ss_pred cCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCEEecCCCcEEEEEEcCCC------CC
Confidence 44444 444433332 11 22 2 445566666666666553 2222111 23577788887421 11
Q ss_pred hHHHHHHHHHHHHC-CceeeccCC------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCKEH-GLLLGRGGL------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~e~-GVLl~~~G~------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|.++ ||++.++.. ..+.+|+.++.. +++|++++++++
T Consensus 347 ---~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~----~~~~i~~~~~~l 397 (407)
T 2zc0_A 347 ---GISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRP----SKEEIPIGIKKL 397 (407)
T ss_dssp ---HHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSS----CTTHHHHHHHHH
T ss_pred ---HHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCC----CHHHHHHHHHHH
Confidence 34578888888 999987421 257899998765 358999999875
No 64
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=98.93 E-value=4.9e-09 Score=101.50 Aligned_cols=170 Identities=8% Similarity=-0.022 Sum_probs=100.5
Q ss_pred ccccceEEehhHhhchhccchhhh-hcccC----Cc-----ch-------HHHhhc-CCccccceeee-chhHHHhhhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLG-FQCLQ----IC-----RF-------VQKDFK-GSFWDKLIVHT-STCTFENFIKI 65 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA-~e~~G----V~-----PD-------i~KaLg-GG~~PigAv~~-~~eI~d~~~~~ 65 (329)
..||+++|+||++++++++|..+. ....+ +. || ++|+++ +| +++|++++ ++++.+.+..
T Consensus 221 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~- 298 (435)
T 3piu_A 221 EDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK- 298 (435)
T ss_dssp HHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGG-GCEEEEEESCHHHHHHHHH-
T ss_pred HHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCc-eeEEEEEeCCHHHHHHHHH-
Confidence 357999999999999888775432 22222 22 66 469998 77 49999999 5667666542
Q ss_pred hhccCCCCccchhhhcc-HHH---HHHHHh-hHHhH-----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEE
Q psy7882 66 KYQILKTPAHKLKISDT-VRP---HVQIKK-SVLER-----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVD 134 (329)
Q Consensus 66 ~~~~~~~~~hg~T~agn-lA~---aaala~-~ile~-----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIe 134 (329)
+..++..+ +++ +++++. +.+++ .+++++..++|.+.|++ ++ +..+++.| +++.++
T Consensus 299 ---------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g-~~~~~~~~g~~~~~~ 364 (435)
T 3piu_A 299 ---------MSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQK----SG-ISCLNGNAGLFCWVD 364 (435)
T ss_dssp ---------HGGGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TT-CEECCCCSSSEEEEE
T ss_pred ---------HhhcCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh----cC-CcccCCCeeEEEEEE
Confidence 12222333 333 233333 33322 23334444444444433 33 22334554 888888
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHC-CceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 135 LVQDKETKVPLNSRHMTHILDSCKEH-GLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 135 f~~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+...... + .......+...|+++ ||++.++. ...+.+||.++.+ ++++|+++++++
T Consensus 365 l~~~~~~--~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~----~~e~i~~~l~~l 425 (435)
T 3piu_A 365 MRHLLRS--N-TFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANL----PERTLDLAMQRL 425 (435)
T ss_dssp CGGGSSS--S-SHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSS----CHHHHHHHHHHH
T ss_pred ccccccc--C-CchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCC----CHHHHHHHHHHH
Confidence 8542111 0 112345688888877 99998742 2357899998654 479999999975
No 65
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=98.93 E-value=1.2e-08 Score=97.24 Aligned_cols=179 Identities=9% Similarity=-0.094 Sum_probs=104.6
Q ss_pred ccccceEEehhHhhchhccchhh-hhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..||+++|+||++++|.++|..+ ....+...+| ++|.++ +| +++|++++++++++.+.. ..+
T Consensus 197 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~--------~~~ 267 (410)
T 3e2y_A 197 VKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTG-WKLGWSIGPAHLIKHLQT--------VQQ 267 (410)
T ss_dssp HHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGG-GCCEEEECCHHHHHHHHH--------HHH
T ss_pred HHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCC-ceEEEEEECHHHHHHHHH--------HHH
Confidence 35799999999999998887532 3333332222 579998 77 599999999999887753 233
Q ss_pred chhhhcc-HHHHHHHHh-hH-------HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCC-
Q psy7882 76 KLKISDT-VRPHVQIKK-SV-------LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVP- 144 (329)
Q Consensus 76 g~T~agn-lA~aaala~-~i-------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p- 144 (329)
.++++.+ ++++++.+. +. .++ ++++.+.....++.|.+..++++........|+++.+++.........
T Consensus 268 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (410)
T 3e2y_A 268 NSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDM 347 (410)
T ss_dssp TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECGGGCCCCTTC
T ss_pred hhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCccEEEEEEchhhhcccccc
Confidence 4556666 555444333 21 111 333333333344444443344444333445677888887532110000
Q ss_pred -CChHHHHHHHHHH-HHCCceeeccCC---------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 145 -LNSRHMTHILDSC-KEHGLLLGRGGL---------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 145 -~~~~~~~~~~~~l-~e~GVLl~~~G~---------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
-+......+...+ .++||++.++.. ..+.+||. +.. ++++|+++++++
T Consensus 348 ~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis--~~~---~~e~l~~~l~~l 406 (410)
T 3e2y_A 348 NSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFC--FIK---KDSTLDAAEEIF 406 (410)
T ss_dssp CSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEE--CCC---CHHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEE--EcC---CHHHHHHHHHHH
Confidence 0001123455544 578999987432 13789987 333 689999999875
No 66
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=98.93 E-value=5.8e-09 Score=99.18 Aligned_cols=168 Identities=11% Similarity=-0.042 Sum_probs=100.2
Q ss_pred ccccceEEehhHhhchhccch-hhhhccc-----CCcch---HHHhhc-CCccccceeeec-hhHHHhhhhhhhccCCCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT-YLGFQCL-----QICRF---VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKYQILKTP 73 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~-~fA~e~~-----GV~PD---i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~~~~~~~ 73 (329)
..||+++|+||++++|+++|. ......+ +...+ ++|.++ +| +++|+++++ +++++.+.. .
T Consensus 194 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~--------~ 264 (399)
T 1c7n_A 194 LKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAG-MGMSNIIIKNPDIRERFTK--------S 264 (399)
T ss_dssp HHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHH--------H
T ss_pred HHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccc-hheEEEEECCHHHHHHHHH--------H
Confidence 357999999999999987774 2222222 11122 579998 77 499999987 568887653 1
Q ss_pred ccchhh-hcc-HHHHHHHHh-h----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceee-EEEeecCCCCCCC
Q psy7882 74 AHKLKI-SDT-VRPHVQIKK-S----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMI-GVDLVQDKETKVP 144 (329)
Q Consensus 74 ~hg~T~-agn-lA~aaala~-~----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~-gIef~~d~~~~~p 144 (329)
.+..++ +.+ ++++++.+. + .+++ .++.++..+++.+.|++. +|.+..+++.|.++ .+++....
T Consensus 265 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~----- 336 (399)
T 1c7n_A 265 RDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVN---HPEIKAPLIEGTYLQWIDFRALK----- 336 (399)
T ss_dssp HHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTSBCCCCSBSSEEEEECGGGC-----
T ss_pred HhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhh---CCCCeEecCCceEEEEEEcccCC-----
Confidence 122223 334 555444333 2 2222 333444444554444431 44444455666554 57774310
Q ss_pred CChHHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 145 LNSRHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 145 ~~~~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+ ...+.+.|+ ++||++.++.. ..+.+|+.++.. +++++++++.+
T Consensus 337 ~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~-----~~~l~~~l~~l 386 (399)
T 1c7n_A 337 MD---HKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAP-----SSVIQESLERL 386 (399)
T ss_dssp CC---HHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSC-----HHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccC-----HHHHHHHHHHH
Confidence 01 345788887 68999987431 257899998742 57899998875
No 67
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=98.93 E-value=8.6e-10 Score=104.85 Aligned_cols=167 Identities=9% Similarity=-0.019 Sum_probs=102.9
Q ss_pred ccccceEEehhHhhchhccchhh-hhcccC-Ccch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQ-ICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~G-V~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~ 74 (329)
.+||+++|+||++++++++|..+ ....++ ..+| ++|+++ .| +++|++++++++++.+.. ..
T Consensus 209 ~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~--------~~ 279 (407)
T 3nra_A 209 ARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSG-YRLGVAFGSRAIIARMEK--------LQ 279 (407)
T ss_dssp HHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGG-GCCEEEEECHHHHHHHHH--------HH
T ss_pred HHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCe-eeEEEEEcCHHHHHHHHH--------HH
Confidence 35799999999999998877533 333333 2233 469998 77 599999999999887764 23
Q ss_pred cchhhhcc-HHHHHHHHh-----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCC
Q psy7882 75 HKLKISDT-VRPHVQIKK-----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLN 146 (329)
Q Consensus 75 hg~T~agn-lA~aaala~-----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~ 146 (329)
+..+++.+ ++++++.+. +.+++ .++.+++.++|.+.| ++++.+.-++.. |.++.+.+....
T Consensus 280 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L----~~~~~~~~~~~~~~~~~~~~~~~~~------- 348 (407)
T 3nra_A 280 AIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVL----RGCEGVFARTPQAGSYLFPRLPKLA------- 348 (407)
T ss_dssp HHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHH----HTSTTCBCCCCSBSSEECCBCCCBS-------
T ss_pred hhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH----hcCCCceeccCCeeEEEEEeCCCCC-------
Confidence 34455555 444443322 22332 344444444444444 445544434444 466666654211
Q ss_pred hHHHHHHHHHHHH-CCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCKE-HGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~e-~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.....+...|++ +||++.++.. ..+.+|+.++. ++++|+++++++
T Consensus 349 -~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-----~~~~i~~~~~~l 398 (407)
T 3nra_A 349 -VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ-----DHEAAVAAARRI 398 (407)
T ss_dssp -SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS-----CHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC-----CHHHHHHHHHHH
Confidence 013457777865 6999987431 35789998762 589999999975
No 68
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=98.92 E-value=1.5e-08 Score=95.51 Aligned_cols=165 Identities=4% Similarity=-0.104 Sum_probs=101.0
Q ss_pred ccccceEEehhHhhchhccchh-hhh-cccCCcch---HHHhhc-CCccccceee-echhHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTY-LGF-QCLQICRF---VQKDFK-GSFWDKLIVH-TSTCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~-fA~-e~~GV~PD---i~KaLg-GG~~PigAv~-~~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
.+||+++|+||++++|++.|.. ... +.++.... ++|.++ +| +++|+++ +++++++.+.. . ..
T Consensus 176 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~--~--------~~ 244 (364)
T 1lc5_A 176 KSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPG-LRLGYLVNSDDAAMARMRR--Q--------QM 244 (364)
T ss_dssp HHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTT-TCCEEEECCCHHHHHHHHH--H--------SC
T ss_pred hhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCc-cceEEEEECCHHHHHHHHH--h--------CC
Confidence 3579999999999998765422 111 22333232 579998 77 5999999 99999887763 1 12
Q ss_pred hhhcc-HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 78 KISDT-VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 78 T~agn-lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+++.+ ++++++.+. +.-+.+++..+.....++.|.+..+++|.+..+++.|.++.+++..+ ...+.+
T Consensus 245 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~-----------~~~l~~ 313 (364)
T 1lc5_A 245 PWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCERE-----------DIDLQR 313 (364)
T ss_dssp TTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCSSSEEEEEESCT-----------TCCHHH
T ss_pred CCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCCCeEEEEECCCc-----------HHHHHH
Confidence 45566 555555444 22111333333333334444433344554444466788888877421 113777
Q ss_pred HHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|.++||++.+... .++.+|+... +.+|++++++++
T Consensus 314 ~l~~~gi~v~~g~~~~~~~~~~iRis~~------~~~~~~~l~~~l 353 (364)
T 1lc5_A 314 RLLTQRILIRSCANYPGLDSRYYRVAIR------SAAQNERLLAAL 353 (364)
T ss_dssp HHHTTTEECEECTTSTTCCTTEEEEECC------CHHHHHHHHHHH
T ss_pred HHHHCCcEEeeCcccCCCCCCEEEEEeC------CHHHHHHHHHHH
Confidence 88899999987532 2578998832 478888888874
No 69
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=98.90 E-value=6.3e-09 Score=102.26 Aligned_cols=168 Identities=12% Similarity=0.016 Sum_probs=105.5
Q ss_pred ccccceEEehhHhhchhccch----hhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT----YLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~----~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
.+||+++|.||+++++.+.|. +++++..+...+ ++|.++.| +++|.+++++++++.+.. ..+..
T Consensus 247 ~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~G-lriG~v~~~~~l~~~l~~--------~~~~~ 317 (448)
T 3aow_A 247 SEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPG-FRIGWMVGDPGIIRKMEI--------AKQST 317 (448)
T ss_dssp HHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCGG-GCCEEEEECHHHHHHHHH--------HHHHH
T ss_pred HHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcccc-ccEEEEEeCHHHHHHHHH--------HHHHh
Confidence 357999999999999877664 333333444455 67999988 499999999999887763 22334
Q ss_pred hhhcc-HHHHHHHHh-hH--HhH-HH----HHHHHHHHHHHHHHHHHHhCC-ceeeEEe-eceeeEEEeecCCCCCCCCC
Q psy7882 78 KISDT-VRPHVQIKK-SV--LER-FV----HTYVVGNFLLTHLSKLREEFA-IVGDVRG-KGLMIGVDLVQDKETKVPLN 146 (329)
Q Consensus 78 T~agn-lA~aaala~-~i--le~-le----~v~~lG~~L~~gL~eL~~~~p-~v~~VRG-~GLm~gIef~~d~~~~~p~~ 146 (329)
+++.+ ++++++.+. +. +++ ++ ..++..+++.+.|++. .| .+..++. -|+++.+++... .+
T Consensus 318 ~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~g~~~~~p~~g~~~~v~~~~~------~~ 388 (448)
T 3aow_A 318 DLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEF---MPEGVKWTKPEGGMFIWVTLPDG------ID 388 (448)
T ss_dssp HSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCTTCEECCCSBSSEEEEECSTT------CC
T ss_pred cCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEeCCCccEEEEEEcCCC------CC
Confidence 55555 544443332 11 122 22 2334444444444432 34 2332333 367778887421 11
Q ss_pred hHHHHHHHHHHHHCCceeeccC------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCKEHGLLLGRGG------LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~e~GVLl~~~G------~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+...|.++||++.++. ...+.+|+.++.. ++++|+++++++
T Consensus 389 ---~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~~----~~e~i~~~~~~L 438 (448)
T 3aow_A 389 ---SKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYV----DEDKIMEGIKRL 438 (448)
T ss_dssp ---HHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSSS----CTHHHHHHHHHH
T ss_pred ---HHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCCC----CHHHHHHHHHHH
Confidence 3458888999999998742 1357899998753 468999999875
No 70
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=98.90 E-value=1.5e-08 Score=95.73 Aligned_cols=157 Identities=10% Similarity=0.004 Sum_probs=105.2
Q ss_pred ccceEEehhHhhchhccchhhhh-cccC-Ccch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGF-QCLQ-ICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~-e~~G-V~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
+++++|+||++++|++....+.. +.++ ...+ ++|.++ +| +++|++++++++.+.+.. . ..+|+
T Consensus 193 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~--------~--~~~~~ 261 (369)
T 3cq5_A 193 APGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAG-GRLGYFVANPAFIDAVML--------V--RLPYH 261 (369)
T ss_dssp CSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGG-GCCEEEEECTHHHHHHHT--------T--SCTTC
T ss_pred CCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcc-cceEEEEeCHHHHHHHHH--------c--CCCCC
Confidence 35999999999999764333332 3344 4445 579998 67 599999999998887753 1 12344
Q ss_pred cc-HHHHHHHHh----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 81 DT-VRPHVQIKK----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 81 gn-lA~aaala~----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
.+ ++++++.+. +.+++ .++.++..++|.+.|++. + +.-+++.|.++.+++.. + ...+.
T Consensus 262 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----g-~~~~~~~~~~~~~~~~~--------~---~~~l~ 325 (369)
T 3cq5_A 262 LSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL----G-YAVVPSESNFVFFGDFS--------D---QHAAW 325 (369)
T ss_dssp SCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHH----T-CEEECCSSSEEEEECCS--------S---HHHHH
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC----C-CEECCCCCeEEEEECCC--------C---HHHHH
Confidence 55 555444333 23333 566777777777777663 2 22345677888877631 1 24577
Q ss_pred HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.|.++||++.+.+ .++.+|+.++ +++|++++++++
T Consensus 326 ~~l~~~gi~v~~~~-~~~~iRis~~------~~~~i~~~~~~l 361 (369)
T 3cq5_A 326 QAFLDRGVLIRDVG-IAGHLRTTIG------VPEENDAFLDAA 361 (369)
T ss_dssp HHHHHTTEECBCCS-CTTEEEEECC------CHHHHHHHHHHH
T ss_pred HHHHHCCEEEEECC-CCCeEEEEeC------CHHHHHHHHHHH
Confidence 88889999998863 3578999886 478999999875
No 71
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=98.90 E-value=1.3e-08 Score=97.49 Aligned_cols=179 Identities=9% Similarity=-0.027 Sum_probs=102.9
Q ss_pred ccccceEEehhHhhchhccchh-hhhcccC----Ccch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQ----ICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~G----V~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..||+++|+||++++|.++|.. .....+. ...+ ++|.++ .| +++|++++++++++.+.. ..+
T Consensus 204 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~--------~~~ 274 (422)
T 3fvs_A 204 QQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATG-WKVGWVLGPDHIMKHLRT--------VHQ 274 (422)
T ss_dssp HHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGG-GCCEEEECCHHHHHHHHH--------HHH
T ss_pred HHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCcc-ceEEEEEeCHHHHHHHHH--------HHh
Confidence 3579999999999999888742 2222222 2223 579998 67 599999999999887753 233
Q ss_pred chhhhcc-HHHHHHHHh-hH-------HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCC--
Q psy7882 76 KLKISDT-VRPHVQIKK-SV-------LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKV-- 143 (329)
Q Consensus 76 g~T~agn-lA~aaala~-~i-------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~-- 143 (329)
..+++.+ ++++++.+. +. .++ ++++.+.-...++.|.+..++++........|++..+++........
T Consensus 275 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (422)
T 3fvs_A 275 NSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMPDL 354 (422)
T ss_dssp TTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECHHHHHHCCCC
T ss_pred hccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEechhhccccccc
Confidence 4566666 555444433 21 111 33333333333444444333444322334557777777743100000
Q ss_pred CC--ChHHHHHHHHHHH-HCCceeeccCC---------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 144 PL--NSRHMTHILDSCK-EHGLLLGRGGL---------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 144 p~--~~~~~~~~~~~l~-e~GVLl~~~G~---------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+. +......+...++ ++||++.+... ..+.+||... . ++++|+++++++
T Consensus 355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~--~---~~e~i~~~l~~l 415 (422)
T 3fvs_A 355 PGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV--K---DEATLQAMDEKL 415 (422)
T ss_dssp CCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECC--C---CHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEec--C---CHHHHHHHHHHH
Confidence 00 0011345666655 57999887431 2578999743 3 689999999975
No 72
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=98.89 E-value=2.5e-08 Score=94.33 Aligned_cols=158 Identities=10% Similarity=0.076 Sum_probs=101.9
Q ss_pred ccceEEehhHhhchhccchhhhh-cccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGF-QCLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~-e~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
+|+++|+||++++|++...++.. +.++.... ++|.++ .| +++|.+++++++.+.+.. . ..+|+.
T Consensus 177 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~--~--------~~~~~~ 245 (356)
T 1fg7_A 177 GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAG-LRCGFTLANEEVINLLMK--V--------IAPYPL 245 (356)
T ss_dssp TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGG-GCCEEEEECHHHHHHHHH--H--------SCSSCS
T ss_pred CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCch-hhhEEEEeCHHHHHHHHH--h--------cCCCCC
Confidence 78999999999999743333332 22332222 569997 77 599999999999887763 1 123345
Q ss_pred c-HHHHHHHHh----hH--HhH-HHHHHHHHHHHHHHHHHHHHhCCce-eeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 82 T-VRPHVQIKK----SV--LER-FVHTYVVGNFLLTHLSKLREEFAIV-GDVRGKGLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 82 n-lA~aaala~----~i--le~-le~v~~lG~~L~~gL~eL~~~~p~v-~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
+ ++++++.+. +. +++ .++.++..++|.+.|++ ++.+ ....+.|.++.+++. + ...
T Consensus 246 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~-~-----------~~~ 309 (356)
T 1fg7_A 246 STPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKE----IPCVEQVFDSETNYILARFK-A-----------SSA 309 (356)
T ss_dssp CHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHH----STTEEEECCCSSSEEEEEET-T-----------HHH
T ss_pred CHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHh----CCCceEECCCCCeEEEEECC-C-----------HHH
Confidence 5 555444443 22 333 45556666666666654 3432 223456777777763 1 235
Q ss_pred HHHHHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.+.|.++||++.++|. ..+.+|+.+. +++|++++++++
T Consensus 310 l~~~L~~~gI~v~~~g~~~~~~~~iRis~~------~~~e~~~~~~~l 351 (356)
T 1fg7_A 310 VFKSLWDQGIILRDQNKQPSLSGCLRITVG------TREESQRVIDAL 351 (356)
T ss_dssp HHHHHHHTTEECEECTTSTTCTTEEEEECC------CHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEEECCCCCCCCCeEEEEeC------CHHHHHHHHHHH
Confidence 77888899999998442 1368999875 478999999875
No 73
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=98.89 E-value=1.1e-08 Score=97.21 Aligned_cols=167 Identities=7% Similarity=-0.034 Sum_probs=101.9
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcc---h----HHHhhc-CCccccceeeec-hhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICR---F----VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~P---D----i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~~~~~~~~h 75 (329)
..||+++|+||++++|+++|..+. ...++.| | ++|.++ +| +++|+++++ +++++.+.. ..+
T Consensus 192 ~~~~~~li~De~~~~~~~~g~~~~-~~~~~~~~~~d~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~--------~~~ 261 (390)
T 1d2f_A 192 ERHGVRVISDEIHMDMVWGEQPHI-PWSNVARGDWALLTSGSKSFNIPA-LTGAYGIIENSSSRDAYLS--------ALK 261 (390)
T ss_dssp HHTTCEEEEECTTTTCBCSSSCCC-CGGGTCCSSEEEEECSHHHHTCGG-GCCEEEEECSHHHHHHHHH--------HHH
T ss_pred HHcCCEEEEEccccccccCCCCCc-CHHHcchhhHhhccCccHhhcccC-hhheEEEECCHHHHHHHHH--------HHh
Confidence 457999999999999988775321 1122322 3 579998 77 499999985 788877653 122
Q ss_pred -chhh-hcc-HHHHHHHHh-h----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecCCCCCCCC
Q psy7882 76 -KLKI-SDT-VRPHVQIKK-S----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQDKETKVPL 145 (329)
Q Consensus 76 -g~T~-agn-lA~aaala~-~----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d~~~~~p~ 145 (329)
..+| +.+ ++++++.+. + .+++ .++.++..+++.+.|++. +|.+..+++.| ++..+++.... .
T Consensus 262 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~ 333 (390)
T 1d2f_A 262 GRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAA---FPELNWQIPQSTYLAWLDLRPLN-----I 333 (390)
T ss_dssp TTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCCSBCSEEEEECGGGC-----C
T ss_pred hhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhh---CCCCEEecCCccEEEEEEccccC-----C
Confidence 3344 445 555444433 2 2222 334455555555555442 44444445555 44467774310 1
Q ss_pred ChHHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 146 NSRHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 146 ~~~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+ ...+.+.|. ++||++.++.. ..+.+|+.++. ++++++++++.+
T Consensus 334 ~---~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-----~~~~l~~~l~~l 382 (390)
T 1d2f_A 334 D---DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-----PRSKLEKGVAGL 382 (390)
T ss_dssp C---HHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC-----CHHHHHHHHHHH
Confidence 1 345788888 68999987432 25789999875 357899888875
No 74
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=98.89 E-value=6.7e-09 Score=99.71 Aligned_cols=168 Identities=7% Similarity=-0.040 Sum_probs=106.2
Q ss_pred ccccceEEehhHhhchhccch-hhhhccc----CCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT-YLGFQCL----QICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~-~fA~e~~----GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..||+++|+||+++++.++|. ......+ +.... ++|.++ +| +++|++++++++++.+.. ..+
T Consensus 202 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~--------~~~ 272 (412)
T 2x5d_A 202 KQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALAR--------IKS 272 (412)
T ss_dssp HHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTT-SCCEEEEECHHHHHHHHH--------HHH
T ss_pred HHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcc-cceEEEEcCHHHHHHHHH--------HHh
Confidence 357999999999999977663 1122222 22222 469998 77 499999999999887764 223
Q ss_pred chhhhcc-HHHHHHHHh-h----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCCh
Q psy7882 76 KLKISDT-VRPHVQIKK-S----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNS 147 (329)
Q Consensus 76 g~T~agn-lA~aaala~-~----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~ 147 (329)
..+++.+ ++++++.+. + .+++ .+++++..++|.+.|+++ .... +++. |+++.+++..+ +..
T Consensus 273 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~---~~~~~g~~~~~~~~~~------~~~ 341 (412)
T 2x5d_A 273 YHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA--GWMV---ENPKASMYVWAKIPEP------YAH 341 (412)
T ss_dssp HHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH--TCCC---CCCSBSSEEEEECCTT------TGG
T ss_pred hhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC--CCEe---cCCCeeeEEEEEcCCc------cCC
Confidence 3456666 555544433 2 2333 556777777787777765 2222 2333 66777777421 100
Q ss_pred HHHHHHHHHHHH-CCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 148 RHMTHILDSCKE-HGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 148 ~~~~~~~~~l~e-~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.-...+.+.|++ +||++.++.. ..+.+|+.++. ++++++++++.+
T Consensus 342 ~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-----~~~~l~~~l~~l 391 (412)
T 2x5d_A 342 LGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE-----NRDRLRQAVRGI 391 (412)
T ss_dssp GCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC-----CHHHHHHHHHHH
Confidence 013457778765 7999987421 25789999875 478999999875
No 75
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=98.89 E-value=9.3e-09 Score=98.89 Aligned_cols=165 Identities=10% Similarity=-0.018 Sum_probs=101.6
Q ss_pred ccccceEEehhHhhchhccchhhhhccc----CCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCL----QICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~----GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
..+|+++|+||++++|.++|.......+ +.... ++|.++ +| +++|++++++++.+.+.. ..+.
T Consensus 211 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~--------~~~~ 281 (404)
T 2o1b_A 211 KGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSG-FRVGFAVGNKDMIQALKK--------YQTH 281 (404)
T ss_dssp TTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHH--------HHHH
T ss_pred HHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCch-hheEeEecCHHHHHHHHH--------HHhh
Confidence 4679999999999999776632111111 22222 569997 77 599999999999887763 2233
Q ss_pred hhhhcc-HHHHHHHHh-hH----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChH
Q psy7882 77 LKISDT-VRPHVQIKK-SV----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 77 ~T~agn-lA~aaala~-~i----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~ 148 (329)
.+++.+ ++++++.+. +. +++ .+++++..++|.+.|+++ +. .-++.. |+++.+++... .+
T Consensus 282 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~-~~~~~~~g~~~~~~~~~~------~~-- 348 (404)
T 2o1b_A 282 TNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA----DL-PFVHAKGGIYVWLETPPG------YD-- 348 (404)
T ss_dssp HCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT----TC-CEECCCBSSEEEEECCTT------CC--
T ss_pred ccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc----CC-eecCCCcceEEEEeCCCC------CC--
Confidence 445556 555544443 22 222 344555556666665553 32 223333 56677777421 11
Q ss_pred HHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|+ ++||++.++.. ..+.+|+.++. ++++++++++.+
T Consensus 349 -~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-----~~e~l~~~l~~l 396 (404)
T 2o1b_A 349 -SEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL-----DDQKLDEAAIRL 396 (404)
T ss_dssp -HHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS-----CTTHHHHHHHHH
T ss_pred -HHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC-----CHHHHHHHHHHH
Confidence 245777777 57999987421 25789999875 356899998875
No 76
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=98.87 E-value=2.1e-08 Score=94.33 Aligned_cols=160 Identities=7% Similarity=-0.041 Sum_probs=103.1
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
.+|+++|.||++++|+..+.....+.++.... ++|.++ +| +++|.+++++++.+.+.. .. .+|+.
T Consensus 177 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~--~~--------~~~~~ 245 (360)
T 3hdo_A 177 RCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAG-MRIGLAIARPEVIAALDK--IR--------DHYNL 245 (360)
T ss_dssp HBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTT-SCCEEEECCHHHHHHHHH--HS--------CSCCS
T ss_pred HCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCc-cceeeEeeCHHHHHHHHH--hC--------CCCCC
Confidence 46899999999999854433333334444444 569997 66 599999999999988764 11 22445
Q ss_pred c-HHHHHHHH---h-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 82 T-VRPHVQIK---K-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 82 n-lA~aaala---~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+ ++++++.+ . +.+++ .++.++..+++.+.|+++ + +..+.+.|.++.+.+... -...+.+
T Consensus 246 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~-~~~~~~~~~~~~~~~~~~----------~~~~l~~ 310 (360)
T 3hdo_A 246 DRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI----G-YDVIPSQGNYLFATPPDR----------DGKRVYD 310 (360)
T ss_dssp CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT----T-CEECCCSSSEEEEECTTC----------CHHHHHH
T ss_pred CHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC----C-CEEcCCCccEEEEECCCC----------CHHHHHH
Confidence 5 44444333 3 33333 455666666666666554 3 223456777777765311 1345778
Q ss_pred HHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|.++||++.+++. ..+.+|+... +++|+|++++++
T Consensus 311 ~l~~~gi~v~~~~~~~~~~~iRis~~------~~~e~~~l~~al 348 (360)
T 3hdo_A 311 GLYARKVLVRHFSDPLLAHGMRISIG------TREEMEQTLAAL 348 (360)
T ss_dssp HHHHTTEECBCCCSTTTTTSEEEECC------CHHHHHHHHHHH
T ss_pred HHHHCCEEEEECCCCCCCCEEEEEcC------CHHHHHHHHHHH
Confidence 89999999987542 3478898743 589999999975
No 77
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.87 E-value=8.5e-09 Score=99.04 Aligned_cols=164 Identities=10% Similarity=-0.033 Sum_probs=103.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCc-ch-----HHHhhc-CCccccceeeech-hHHHhhhhhhhccCCCCccc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQIC-RF-----VQKDFK-GSFWDKLIVHTST-CTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~-PD-----i~KaLg-GG~~PigAv~~~~-eI~d~~~~~~~~~~~~~~hg 76 (329)
..+|+++|+||++++++++|..... ..++. .| ++|.++ +| +++|++++++ ++++.+.. ..+.
T Consensus 204 ~~~~~~li~Dea~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~l~~~l~~--------~~~~ 273 (409)
T 2gb3_A 204 ERHGLFLIVDEVYSEIVFRGEFASA-LSIESDKVVVIDSVSKKFSACG-ARVGCLITRNEELISHAMK--------LAQG 273 (409)
T ss_dssp HHTTCEEEEECTTTTCBCSSCCCCG-GGSCCTTEEEEEESTTTTTCGG-GCCEEEECSCHHHHHHHHH--------HHHH
T ss_pred HHcCCEEEEECcccccccCCCCCCc-cccCCCCEEEEecchhccCCcc-ceEEEEEECcHHHHHHHHH--------HHhc
Confidence 3579999999999999877754333 22332 35 469997 66 5999999999 88887653 1122
Q ss_pred hhhhcc-HHHHH---HHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 77 LKISDT-VRPHV---QIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 77 ~T~agn-lA~aa---ala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
.+ +.+ +++++ +++. +.+++ .+++++..+++.+.|+++ ....+ ....-|++..+.+. +. +
T Consensus 274 ~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~-~~~~~~~~~~~~~~-~~------~--- 339 (409)
T 2gb3_A 274 RL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH--GLKRF-TKPSGAFYITAELP-VE------D--- 339 (409)
T ss_dssp SC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT--TCCCB-CCCSBSSEEEEECS-SS------C---
T ss_pred cC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc--Cceee-eCCCeeEEEEEEeC-CC------C---
Confidence 22 344 44433 3322 22333 456667777777777664 22220 11223666666663 11 1
Q ss_pred HHHHHHHHHHC------CceeeccC-------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEH------GLLLGRGG-------LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~------GVLl~~~G-------~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|.++ ||++.+.. ...+.+|+.++ . ++++++++++++
T Consensus 340 ~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~--~---~~e~i~~~~~~l 395 (409)
T 2gb3_A 340 AEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--L---EKDLLSRAIDVL 395 (409)
T ss_dssp HHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--S---CHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC--C---CHHHHHHHHHHH
Confidence 34577888887 99998742 12578999988 3 588999999975
No 78
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=98.86 E-value=6.3e-09 Score=98.11 Aligned_cols=164 Identities=11% Similarity=0.004 Sum_probs=105.8
Q ss_pred ccccceEEehhHhhchhccchhhhhccc-CCcc-h-----HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCL-QICR-F-----VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~-GV~P-D-----i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
..||+++|.||+++++.+.|.......+ +..+ | ++|.++ .| +++|++++++++++.+.. ..++
T Consensus 180 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~--------~~~~ 250 (370)
T 2z61_A 180 YENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTG-WRIGYVISNDEIIEAILK--------LQQN 250 (370)
T ss_dssp HHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHH--------HHHH
T ss_pred HHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCcc-ceEEEEEECHHHHHHHHH--------HHhh
Confidence 3579999999999998777654333333 1222 3 469997 67 499999999999887763 2344
Q ss_pred hhhhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882 77 LKISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 77 ~T~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~ 148 (329)
.+++.+ ++++++.+. +. +++ .+++++..+++.+.|+++ ....+. ..-|+++.+++..
T Consensus 251 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~~~~~~~~----------- 315 (370)
T 2z61_A 251 LFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF--GWEVNN--PIGAYYVFPNIGE----------- 315 (370)
T ss_dssp HTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCBCCC--CCBTTEECCBCSS-----------
T ss_pred cccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc--CCeecC--CCcceEEEEecCC-----------
Confidence 556666 666555444 32 222 455667777777777664 222211 1225555555531
Q ss_pred HHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
-...+.+.|. ++||++.++.. ..+.+|+.++ . ++++|+++++++
T Consensus 316 ~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~--~---~~~~i~~~~~~l 364 (370)
T 2z61_A 316 DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA--N---SYENIKEGLERI 364 (370)
T ss_dssp CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC--S---CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--C---CHHHHHHHHHHH
Confidence 0245778887 78999987421 2578999988 2 578999999874
No 79
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=98.85 E-value=1.9e-08 Score=96.03 Aligned_cols=161 Identities=12% Similarity=-0.016 Sum_probs=101.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeech-hHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTST-CTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~-eI~d~~~~~~~~~~~~~~hg~ 77 (329)
..+|+++|+||+++++...- .. .++ +| ++|.++|+..++ |++++++ ++++.+.. ..++.
T Consensus 164 ~~~~~~li~De~~~~~~~~~-~~---~~~--~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~--------~~~~~ 229 (386)
T 1cs1_A 164 REVGAVSVVDNTFLSPALQN-PL---ALG--ADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAW--------WANNI 229 (386)
T ss_dssp HHTTCEEEEECTTTCTTTCC-GG---GGT--CSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHH--------HHHHH
T ss_pred HHcCCEEEEECCCcccccCC-cc---ccC--ceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHH--------HHHhc
Confidence 35799999999999886531 11 233 55 569998776455 8888886 78877653 23344
Q ss_pred hhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceee------------------EEeeceeeEEEee
Q psy7882 78 KISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGD------------------VRGKGLMIGVDLV 136 (329)
Q Consensus 78 T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~------------------VRG~GLm~gIef~ 136 (329)
+++.+ ++++++++. +.++. .++..+..+.+.+.|++ ++.+.+ ++|.|.|+++++.
T Consensus 230 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~----~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (386)
T 1cs1_A 230 GVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQT----QPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD 305 (386)
T ss_dssp TCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTT----CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES
T ss_pred CCCCCHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEEC
Confidence 44556 666655554 43332 33344444444444433 222221 3677999999984
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHCCceeec--cC--------------------------CCCCEEEEeCccccCcCCHH
Q psy7882 137 QDKETKVPLNSRHMTHILDSCKEHGLLLGR--GG--------------------------LSGNTLTALQPKLLNYWTDF 188 (329)
Q Consensus 137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~--~G--------------------------~~~nvIrl~PPL~It~~t~e 188 (329)
.. ...+...+.++||++.. .| ...+.+|+.|++ +++++
T Consensus 306 ~~-----------~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~---~~~~~ 371 (386)
T 1cs1_A 306 GD-----------EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI---EDGED 371 (386)
T ss_dssp SC-----------HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHH
T ss_pred CC-----------HHHHHHHHHhCCcceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc---CCHHH
Confidence 21 23466777889998864 12 125899999998 34788
Q ss_pred HHHHHHhcc
Q psy7882 189 VGTPCLDCE 197 (329)
Q Consensus 189 eId~~l~~~ 197 (329)
+|+.+.+++
T Consensus 372 ~i~~l~~al 380 (386)
T 1cs1_A 372 LIADLENGF 380 (386)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888888774
No 80
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=98.85 E-value=2.5e-08 Score=94.34 Aligned_cols=161 Identities=9% Similarity=-0.097 Sum_probs=103.5
Q ss_pred ccccceEEehhHhhchhc--cc-hhhhhcccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGD--NG-TYLGFQCLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGR--TG-~~fA~e~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
..||+++|+||+++++.. ++ .++.. .+++.++ ++|.++ .| +++|++++++++++.+.. ..+..
T Consensus 182 ~~~~~~li~De~~~~~~~g~~~~~~~~~-~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~--------~~~~~ 251 (381)
T 1v2d_A 182 RAHDLFLISDEVYDELYYGERPRRLREF-APERTFTVGSAGKRLEATG-YRVGWIVGPKEFMPRLAG--------MRQWT 251 (381)
T ss_dssp HHTTCEEEEECTTTTCBSSSCCCCHHHH-CTTTEEEEEEHHHHTTCGG-GCCEEEECCTTTHHHHHH--------HHHHH
T ss_pred HHcCCEEEEEcCccccccCCCCCCHHHh-cCCCEEEEeechhhcCCcc-cceEEEEeCHHHHHHHHH--------HHhhc
Confidence 357999999999998843 22 23333 4566666 679997 66 599999999999887753 12234
Q ss_pred hhhcc-HHHHHHHHh-hH------HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882 78 KISDT-VRPHVQIKK-SV------LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 78 T~agn-lA~aaala~-~i------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~ 148 (329)
+++.+ ++++++.+. +. +++ .++++++.++|.+.|+++ ....+.. .-|+++.+++.. .+
T Consensus 252 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~--~~~~~~~~~~~~---------~~ 318 (381)
T 1v2d_A 252 SFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM--GLRVYVP--EGTYFLMAELPG---------WD 318 (381)
T ss_dssp TSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT--TCCEECC--SBSSEEEEECTT---------CC
T ss_pred ccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC--CCEecCC--CcceEEEEecCh---------Hh
Confidence 45555 444444333 22 222 556777777787777763 2222111 126667676632 01
Q ss_pred HHHHHHHHHHHCCceeeccCC------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCKEHGLLLGRGGL------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~e~GVLl~~~G~------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+...+.++||++.++.. ..+.+|+.++. ++++++++++++
T Consensus 319 ----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-----~~~~i~~~~~~l 364 (381)
T 1v2d_A 319 ----AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-----TEEELHLALERL 364 (381)
T ss_dssp ----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred ----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC-----CHHHHHHHHHHH
Confidence 55667899999987421 35789999864 478999999874
No 81
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=98.83 E-value=1.2e-08 Score=96.97 Aligned_cols=170 Identities=12% Similarity=0.028 Sum_probs=105.1
Q ss_pred ccccceEEehhHhhc-hhccchhhhhcccCCcch-----HHHhhcCCccccceeeec-hhHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFG-SGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTS-TCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTG-fGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
..||+++|+||++++ +...|.... ... .+| ++|+|+|+ ..|+++++ +++++.+.. .. .++.
T Consensus 188 ~~~~~~li~Dea~~~g~~~~~~~~~--~~~-~~di~~~s~sK~l~g~--~~G~~~~~~~~~~~~l~~--~~-----~~~~ 255 (407)
T 2dkj_A 188 DEVGAYLVVDMAHFAGLVAAGLHPN--PLP-YAHVVTSTTHKTLRGP--RGGLILSNDPELGKRIDK--LI-----FPGI 255 (407)
T ss_dssp HHHTCEEEEECTTTHHHHHTTCSCC--CTT-TCSEEEEESSGGGCCC--SCEEEEESCHHHHHHHHH--HH-----TTTT
T ss_pred HHcCCEEEEEccccccccccCccCC--ccc-cccEEEEeccccCCCC--CceEEEECCHHHHHHHHh--hh-----cccc
Confidence 457999999999986 544554221 111 267 46999876 46999999 788887653 11 1222
Q ss_pred hhhcc-HHHH---HHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 78 KISDT-VRPH---VQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 78 T~agn-lA~a---aala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
+.+.+ ..++ ++++. +.+++ .++.+++.+++.+.|+++ ..+.+.. ++.|.++.+++.... . -
T Consensus 256 ~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~-~~~~~~~~~~~~~~~-----~---~ 324 (407)
T 2dkj_A 256 QGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR--GYRIVTG-GTDNHLFLVDLRPKG-----L---T 324 (407)
T ss_dssp CSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT--TCEEGGG-SCSSSEEEEECGGGT-----C---C
T ss_pred cCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC--CceeecC-CCCceEEEEECcccC-----C---C
Confidence 22333 2232 33322 12233 677888888888888775 2222221 456888888885311 0 1
Q ss_pred HHHHHHHHHHCCceeeccCC--------CCCEEEEeCcccc-CcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGGL--------SGNTLTALQPKLL-NYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G~--------~~nvIrl~PPL~I-t~~t~eeId~~l~~~ 197 (329)
...+.+.|.++||++.++.. .++.+|+.++... ...+++|++++++++
T Consensus 325 ~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l 381 (407)
T 2dkj_A 325 GKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELI 381 (407)
T ss_dssp HHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHH
Confidence 34577888899999987421 2568999987641 012578999999985
No 82
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=98.83 E-value=2e-08 Score=94.95 Aligned_cols=165 Identities=8% Similarity=-0.004 Sum_probs=109.6
Q ss_pred ccccceEEehhHh-hch-hccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVD-FGS-GDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVq-TGf-GRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
.+||+++|.||++ .|+ +++|..+. +.++..|| ++|.++. |.|.+++++++++.+.. .. ..+..
T Consensus 195 ~~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~~di~~~s~sK~~~~---~GG~~~~~~~~~~~l~~--~~----~~~~~ 264 (384)
T 1bs0_A 195 QQHNGWLMVDDAHGTGVIGEQGRGSC-WLQKVKPELLVVTFGKGFGV---SGAAVLCSSTVADYLLQ--FA----RHLIY 264 (384)
T ss_dssp HHTTCEEEEECTTTTTTSSGGGCCHH-HHTTCCCSEEEEESSSTTSS---CCEEEEECHHHHHHHHH--HC----HHHHS
T ss_pred HHcCcEEEEECCcccceecCCCCchH-HhcCCCCcEEEeeccchhhc---cCcEEEeCHHHHHHHHH--hc----hhhhc
Confidence 4679999999998 464 66766443 56777899 4598862 55888899998887653 10 01222
Q ss_pred hhhcc-HHHHHHHHh-hHHh-----H-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCCCCCCChH
Q psy7882 78 KISDT-VRPHVQIKK-SVLE-----R-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 78 T~agn-lA~aaala~-~ile-----~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~~~p~~~~ 148 (329)
|++.+ ++++++.+. +.++ + .++++++.+++.+.|+++ +. .+. +.|.++.+.+.. ..
T Consensus 265 ~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~--~~~~~~~~~~~~~~~~---------~~ 329 (384)
T 1bs0_A 265 STSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL----PF--TLADSCSAIQPLIVGD---------NS 329 (384)
T ss_dssp SBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS----SC--EECSCCSSBCCEEEES---------HH
T ss_pred CCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc----CC--cccCCCCCEEEEEeCC---------HH
Confidence 33455 666555544 3332 3 566777777777777654 32 233 567787787742 12
Q ss_pred HHHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
....+.+.|.++||++.+... ..+.+|+.++... +++|++++++++
T Consensus 330 ~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~---~~~~i~~~~~~l 380 (384)
T 1bs0_A 330 RALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAH---EMQDIDRLLEVL 380 (384)
T ss_dssp HHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCC---CHHHHHHHHHHH
Confidence 345688899999999987532 1368999988655 589999999875
No 83
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=98.82 E-value=1.5e-08 Score=95.94 Aligned_cols=167 Identities=12% Similarity=0.024 Sum_probs=105.1
Q ss_pred ccccceEEehhHhhchhccch-hhhhccc-CC-cch-----HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT-YLGFQCL-QI-CRF-----VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~-~fA~e~~-GV-~PD-----i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..||+++|+||+++++.++|. ......+ ++ ..| ++|.++ .| +++|.+++++++++.+.. ..+
T Consensus 190 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~--------~~~ 260 (389)
T 1gd9_A 190 VEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTG-WRLGFVAAPSWIIERMVK--------FQM 260 (389)
T ss_dssp HHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHH--------HHT
T ss_pred HHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcc-cceEEEEECHHHHHHHHH--------HHh
Confidence 357999999999999987765 3333333 22 235 469997 66 599999999999887764 223
Q ss_pred chhhhcc-HHHHHHHHh-h------HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC
Q psy7882 76 KLKISDT-VRPHVQIKK-S------VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN 146 (329)
Q Consensus 76 g~T~agn-lA~aaala~-~------ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~ 146 (329)
+.+++.+ ++++++.+. + .+++ .+++++..++|.+.|+++ ....+. ..-|+++.+++.... .+
T Consensus 261 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~~~~~~~~~~-----~~ 331 (389)
T 1gd9_A 261 YNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM--GLPTVK--PKGAFYIFPRIRDTG-----LT 331 (389)
T ss_dssp TTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCCCCC--CCBTTEECCBCGGGT-----CC
T ss_pred hhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc--CCeecC--CCeeeEEEEeccCCC-----CC
Confidence 3445555 444443333 2 2333 456667777777777664 222221 123555655653200 11
Q ss_pred hHHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|. ++||++.+... ..+.+|+.++. ++++++++++.+
T Consensus 332 ---~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-----~~~~i~~~l~~l 379 (389)
T 1gd9_A 332 ---SKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-----AYEKLEEAMDRM 379 (389)
T ss_dssp ---HHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-----CHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-----CHHHHHHHHHHH
Confidence 345788887 89999987421 25789999762 578999999875
No 84
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=98.82 E-value=5.8e-08 Score=91.27 Aligned_cols=169 Identities=10% Similarity=0.008 Sum_probs=103.6
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCC---------
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILK--------- 71 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~--------- 71 (329)
.+|+++|+||+++ +|.+. .......+| ++|.+.||. ++|++++++++++.+.....+...
T Consensus 186 ~~~~~li~Dea~~-~g~~~----~~~~~~~~d~~~~s~~K~~~~~~-g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 259 (390)
T 1elu_A 186 NYPVRVLVDGAQS-AGSLP----LDFSRLEVDYYAFTGHKWFAGPA-GVGGLYIHGDCLGEINPTYVGWRSITYGAKGEP 259 (390)
T ss_dssp SSCCEEEEECTTT-BTTBC----CCTTTSCCSEEEEESSSTTCCCT-TCEEEEECTTTGGGCCCCSCCTTTEEECTTSCE
T ss_pred hcCcEEEEEcccc-cCCcC----CChhhcCCCEEEccccccccCCC-ceEEEEECHHhHhhcCCccccCCcccccccCcc
Confidence 6899999999997 55442 112234577 459888884 799999999888765420000000
Q ss_pred ----CCccch-hhhcc-HHHH---HHHHh----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE---EeeceeeEEE
Q psy7882 72 ----TPAHKL-KISDT-VRPH---VQIKK----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV---RGKGLMIGVD 134 (329)
Q Consensus 72 ----~~~hg~-T~agn-lA~a---aala~----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V---RG~GLm~gIe 134 (329)
...+.. +.+.+ .+++ ++++. +.+++ .++.+++.+++.+.|+++ +.+.-+ ++.|.|+.++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~ 335 (390)
T 1elu_A 260 TGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQL----PHVHCLATSAPQAGLVSFT 335 (390)
T ss_dssp EEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHS----TTEEESCSSCCSSSEEEEE
T ss_pred cccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhc----CCcEEecCccccccEEEEE
Confidence 000011 11223 3333 33332 11333 566777777777777654 222212 4678888888
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+..+. + ...+.+.|.++||++.+.. ..+.+|+.+++.. +++|++++++++
T Consensus 336 ~~~~~------~---~~~~~~~l~~~gi~v~~~~-~~~~iRis~~~~~---~~~~i~~~~~~l 385 (390)
T 1elu_A 336 VDSPL------G---HRAIVQKLEEQRIYLRTIA-DPDCIRACCHYIT---DEEEINHLLARL 385 (390)
T ss_dssp ECSSS------C---HHHHHHHHHHTTEECEEET-TTTEEEEECCTTC---CHHHHHHHHHHH
T ss_pred cCCCC------C---HHHHHHHHHHCCEEEEecC-CCCeEEEecccCC---CHHHHHHHHHHH
Confidence 74211 1 3457888889999998753 3589999998776 589999999875
No 85
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=98.81 E-value=2.9e-08 Score=95.71 Aligned_cols=170 Identities=9% Similarity=-0.074 Sum_probs=106.7
Q ss_pred ccccceEEehhHhhchhccchh----hhhccc----CCcch-------HHHhhc-CCccccceeee-chhHHHhhhhhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTY----LGFQCL----QICRF-------VQKDFK-GSFWDKLIVHT-STCTFENFIKIKY 67 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~----fA~e~~----GV~PD-------i~KaLg-GG~~PigAv~~-~~eI~d~~~~~~~ 67 (329)
..+|+++|+||++++++++|.. ++.... ++.|| ++|+++ .| +++|++++ ++++.+.+.. .
T Consensus 218 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~G-lr~G~~~~~~~~~~~~~~~--~ 294 (428)
T 1iay_A 218 NQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG-FRVGIIYSFNDDVVNCARK--M 294 (428)
T ss_dssp HTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG-GCEEEEEESCHHHHHHHHH--H
T ss_pred HHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCC-ceEEEEEeCCHHHHHHHHH--H
Confidence 3679999999999998766532 222211 34477 469997 77 59999998 6788877653 1
Q ss_pred ccCCCCccchhhhcc-HHHHHHHHh----h----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEee
Q psy7882 68 QILKTPAHKLKISDT-VRPHVQIKK----S----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLV 136 (329)
Q Consensus 68 ~~~~~~~hg~T~agn-lA~aaala~----~----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~ 136 (329)
..+++.+ ++++++.+. + .+++ .+++++..++|.+.|+++ +. .-+++ .|.++.+++.
T Consensus 295 --------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~-~~~~~~~g~~~~~~~~ 361 (428)
T 1iay_A 295 --------SSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV----GI-KCLKNNAGLFCWMDLR 361 (428)
T ss_dssp --------HTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TC-CBCCCSSSSEEEEECG
T ss_pred --------HhcccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CC-cccCCCeeEEEEEech
Confidence 1123344 444444332 2 1222 556667777777777664 22 11234 5778888885
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHC-CceeeccCCC----CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 137 QDKETKVPLNSRHMTHILDSCKEH-GLLLGRGGLS----GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 137 ~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G~~----~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.... .+ .......+.+.|.++ ||++.+++.. ++.+|+.++ .. ++++++++++++
T Consensus 362 ~~~~--~~-~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~-~~---~~e~i~~~~~~l 420 (428)
T 1iay_A 362 PLLR--ES-TFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA-NM---DDGTVDIALARI 420 (428)
T ss_dssp GGCS--SS-SHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS-SS---CHHHHHHHHHHH
T ss_pred hhcC--CC-chhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-cC---CHHHHHHHHHHH
Confidence 3210 00 112345688888886 9999875321 468999987 33 689999999875
No 86
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=98.30 E-value=4.9e-10 Score=106.93 Aligned_cols=172 Identities=7% Similarity=-0.068 Sum_probs=102.4
Q ss_pred cccccceEEehhHhhchhccch----hhhhcc--cCCcch---HHHhhc-CCccccceeeech-hHHHhhhhhhhccCCC
Q psy7882 4 TYYRDCGVVVSAVDFGSGDNGT----YLGFQC--LQICRF---VQKDFK-GSFWDKLIVHTST-CTFENFIKIKYQILKT 72 (329)
Q Consensus 4 ~~~~giLLI~DEVqTGfGRTG~----~fA~e~--~GV~PD---i~KaLg-GG~~PigAv~~~~-eI~d~~~~~~~~~~~~ 72 (329)
-..||+++|+||++++|+++|. ++++.. .+..++ ++|+++ +| +++|++++++ ++++.+..
T Consensus 193 ~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~-------- 263 (392)
T 3b1d_A 193 CQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAG-TKNSYAIIENPTLCAQFKH-------- 263 (392)
Confidence 3467999999999999988773 333322 344455 579998 77 4999999875 48776653
Q ss_pred Cccchhh-hcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHh-CCceeeEEeeceeeE-EEeecCCCCCCCCC
Q psy7882 73 PAHKLKI-SDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREE-FAIVGDVRGKGLMIG-VDLVQDKETKVPLN 146 (329)
Q Consensus 73 ~~hg~T~-agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~-~p~v~~VRG~GLm~g-Ief~~d~~~~~p~~ 146 (329)
..+..++ +.+ ++++++.+. +..++ ++++.+.....++.|.+..++ +|.+..+++.|.|+. +++....
T Consensus 264 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~------- 336 (392)
T 3b1d_A 264 QQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYG------- 336 (392)
Confidence 2223333 335 555544443 21111 334444444444444444333 444555677777665 6764210
Q ss_pred hHHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.....+.+.|+ ++||++.++.. ..+.+|+.. .. ++++|+++++++
T Consensus 337 -~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~---~~e~i~~~l~~l 386 (392)
T 3b1d_A 337 -LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNI--AA---PKSLVEEICKRI 386 (392)
Confidence 01235777786 78999987421 245788763 22 367899988875
No 87
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=98.80 E-value=1.7e-08 Score=95.77 Aligned_cols=169 Identities=9% Similarity=-0.025 Sum_probs=104.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCC-cch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
..||+++|+||+++ +|+++.. ....++ .+| ++|+++|+. . |++++++++++.+.. . .++.+
T Consensus 188 ~~~~~~li~Dea~~-~g~~~~~--~~~~~~~~~di~~~s~sK~~~g~~-g-G~~~~~~~~~~~l~~--~------~~~~~ 254 (405)
T 2vi8_A 188 DEVGAYLMVDMAHI-AGLVAAG--LHPNPVPYAHFVTTTTHKTLRGPR-G-GMILCQEQFAKQIDK--A------IFPGI 254 (405)
T ss_dssp HHHTCEEEEECTTT-HHHHHTT--SSCCSTTTCSEEEEESSSTTCCCS-C-EEEEECHHHHHHHHH--H------HTTTT
T ss_pred HHcCCEEEEEcccc-ccccccC--cCCCccccCCEEEEeccccCCCCC-C-eEEEEcHHHHHHHHh--h------hcccc
Confidence 35799999999999 6665431 122333 477 359998753 4 888899888887653 1 01112
Q ss_pred hhc-c-HHHH---HHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 79 ISD-T-VRPH---VQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 79 ~ag-n-lA~a---aala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
+++ + ..++ ++++. +.+++ .++++++.++|.+.|+++ ..+.+.. ++.|.++.+.+.... .+
T Consensus 255 ~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~-~~~~~~~~~~~~~~~-----~~--- 323 (405)
T 2vi8_A 255 QGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE--GFTLVSG-GTDNHLLLVDLRPQQ-----LT--- 323 (405)
T ss_dssp CSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT--TCEEGGG-SCSSSEEEEECGGGT-----CC---
T ss_pred cCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC--CCeEecC-CCCceEEEEEccCCC-----CC---
Confidence 222 2 2222 33322 12233 677888888998888875 2222211 245788888885311 01
Q ss_pred HHHHHHHHHHCCceeeccC-------C-CCCEEEEeCccccC-cCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGG-------L-SGNTLTALQPKLLN-YWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G-------~-~~nvIrl~PPL~It-~~t~eeId~~l~~~ 197 (329)
...+.+.|.++||++.++. . .++.+|+.++...+ .++++|++++++++
T Consensus 324 ~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l 380 (405)
T 2vi8_A 324 GKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAII 380 (405)
T ss_dssp HHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHH
Confidence 3457778889999998731 1 24689999987321 34689999999985
No 88
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=98.80 E-value=3.6e-08 Score=92.64 Aligned_cols=172 Identities=11% Similarity=0.011 Sum_probs=104.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc-----
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA----- 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~----- 74 (329)
..||+++|+||+++ +| +..+..+.++ +| ..|+++|+. ++|++++++++++.+....... ..+.
T Consensus 175 ~~~~~~li~De~~~-~g--~~~~~~~~~~--~d~~~~s~sK~~~~~~-g~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 247 (393)
T 3kgw_A 175 HRYQCLLLVDSVAS-LG--GVPIYMDQQG--IDIMYSSSQKVLNAPP-GISLISFNDKAKYKVYSRKTKP-VSFYTDITY 247 (393)
T ss_dssp HHTTCEEEEECTTT-TT--TSCCCTTTTT--CCEEEEESSSTTCCCS-SCEEEEECHHHHHHHHTCSSCC-SCSTTCHHH
T ss_pred HHcCCEEEEECCcc-cc--CcccchhhcC--CCEEEecCcccccCCC-ceeEEEECHHHHHHHhccCCCC-CceeecHHH
Confidence 46799999999987 22 2233334444 45 349998874 8999999999988775310000 0000
Q ss_pred ----------cc-hhhhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHHHHHHHhCCce--eeEEeeceeeEE
Q psy7882 75 ----------HK-LKISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHLSKLREEFAIV--GDVRGKGLMIGV 133 (329)
Q Consensus 75 ----------hg-~T~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL~eL~~~~p~v--~~VRG~GLm~gI 133 (329)
+. .+++.+ .++++..+. +. +++ .+++.++.+++.+.|+++ ..... ......+.+..+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~ 325 (393)
T 3kgw_A 248 LAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM--GLKFFVKDPEIRLPTITTV 325 (393)
T ss_dssp HHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCBSSSSGGGBCSSEEEE
T ss_pred HHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCeeccCChhhcCCeEEEE
Confidence 00 112223 333333222 32 233 667788888888888776 22221 112234566777
Q ss_pred EeecCCCCCCCCChHHHHHHHHHHHHC-CceeeccC--CCCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882 134 DLVQDKETKVPLNSRHMTHILDSCKEH-GLLLGRGG--LSGNTLTALQ-PKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 134 ef~~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G--~~~nvIrl~P-PL~It~~t~eeId~~l~~~ 197 (329)
.+.... ....+.+.|.++ ||++.++. ..++.+|+.+ ++++ +++|++++++++
T Consensus 326 ~~~~~~---------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~---~~~~i~~~~~~l 381 (393)
T 3kgw_A 326 TVPAGY---------NWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNA---TTENVDRVAEAL 381 (393)
T ss_dssp ECCTTB---------CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGC---CHHHHHHHHHHH
T ss_pred eCCCCC---------CHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCC---CHHHHHHHHHHH
Confidence 764211 134578888887 99998642 2467999998 8876 479999999985
No 89
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=98.80 E-value=1.2e-08 Score=96.63 Aligned_cols=167 Identities=5% Similarity=-0.062 Sum_probs=103.0
Q ss_pred ccccceEEehhHhhchhccch----hhhhcc--cCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT----YLGFQC--LQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~----~fA~e~--~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~ 74 (329)
..||+++|+||+++++.+.|. ++.+.. ++..++ ++|.++ .| +++|.+++++++++.+.. ..
T Consensus 193 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~--------~~ 263 (388)
T 1j32_A 193 VEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTG-WRVGFLAGPVPLVKAATK--------IQ 263 (388)
T ss_dssp HHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTT-TCCEEEECCHHHHHHHHH--------HH
T ss_pred HHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcc-cceEEEEeCHHHHHHHHH--------HH
Confidence 357999999999999977663 222211 334444 579997 67 499999999999887753 22
Q ss_pred cchhhhcc-HHHHHHHHh-----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCC
Q psy7882 75 HKLKISDT-VRPHVQIKK-----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLN 146 (329)
Q Consensus 75 hg~T~agn-lA~aaala~-----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~ 146 (329)
++++++.+ ++++++++. +.+++ .+++++..++|.+.|+++ +.+.-+... |++..+.+.... .+
T Consensus 264 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~~-----~~ 334 (388)
T 1j32_A 264 GHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAM----PGLECPKPDGAFYMFPSIAKTG-----RS 334 (388)
T ss_dssp HTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTC----TTCBCCCCCBTTEECCBCGGGT-----CC
T ss_pred hhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhC----CCCcccCCCeeEEEEEecCCCC-----CC
Confidence 34455556 555443332 22333 556667777777776553 322222233 444444442100 01
Q ss_pred hHHHHHHHHHHHH-CCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCKE-HGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~e-~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+...|.+ +||++.+... ..+.+|+.++ . ++++++++++.+
T Consensus 335 ---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~---~~~~i~~~~~~l 380 (388)
T 1j32_A 335 ---SLDFCSELLDQHQVATVPGAAFGADDCIRLSYA--T---DLDTIKRGMERL 380 (388)
T ss_dssp ---HHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC--S---CHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec--C---CHHHHHHHHHHH
Confidence 3457788876 7999987421 1578999975 2 689999999875
No 90
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=98.79 E-value=3.5e-08 Score=93.94 Aligned_cols=166 Identities=8% Similarity=-0.011 Sum_probs=107.5
Q ss_pred ccccceEEehhHhh-c-hhccchhhhhcccCCc--ch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDF-G-SGDNGTYLGFQCLQIC--RF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqT-G-fGRTG~~fA~e~~GV~--PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..||+++|.||++. | ++++|..+ .+.+++. || ++|.++. |-|.+++++++++.+... . ..+
T Consensus 200 ~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~di~~~s~sK~~~~---~GG~~~~~~~~~~~l~~~--~----~~~ 269 (398)
T 3a2b_A 200 NEFDAAVMVDDAHSLGVIGHKGAGT-ASHFGLNDDVDLIMGTFSKSLAS---LGGFVAGDADVIDFLKHN--A----RSV 269 (398)
T ss_dssp HHHTCEEEEECTTTTTTSSGGGCCH-HHHHTCGGGCSEEEEESSSTTCS---SCEEEEECHHHHHHHHHH--C----HHH
T ss_pred HHcCcEEEEECCCcccccCCCCCch-HhhcCCCcCCeEEEecccccccC---CCcEEEeCHHHHHHHHHh--c----ccc
Confidence 35799999999995 5 45666433 4556765 57 4699873 116688899888876530 0 012
Q ss_pred chhhhcc-HHHH---HHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 76 KLKISDT-VRPH---VQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 76 g~T~agn-lA~a---aala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
..+...+ +.++ ++++. +.+++ .++.++..+++.+.|+++ ..+. +++.|.++.+.+.. ...
T Consensus 270 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~---~~~~g~~~~~~~~~---------~~~ 335 (398)
T 3a2b_A 270 MFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH--GFDL---GATESPILPIFIRS---------NEK 335 (398)
T ss_dssp HSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT--TCCB---CSCCSSEEEEECCC---------HHH
T ss_pred eecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc--CCCc---CCCCCCEEEEEcCC---------HHH
Confidence 2233333 3332 33333 22223 677888888888888875 2332 23558888888742 122
Q ss_pred HHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|.++||++.+... ..+.+|+.++..+ +++|++++++++
T Consensus 336 ~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~~~---~~e~i~~~~~~l 385 (398)
T 3a2b_A 336 TFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMATH---TYDQIDEAIEKM 385 (398)
T ss_dssp HHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeCCC---CHHHHHHHHHHH
Confidence 45688899999999987532 2478999988755 589999999985
No 91
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=98.78 E-value=3.2e-08 Score=96.04 Aligned_cols=164 Identities=8% Similarity=-0.098 Sum_probs=101.3
Q ss_pred ccccceEEehhHhhchhccchh-hhhcccC----Ccch---HHHhhc-CCccccceeeechhHHHh--------hhhhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQ----ICRF---VQKDFK-GSFWDKLIVHTSTCTFEN--------FIKIKY 67 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~G----V~PD---i~KaLg-GG~~PigAv~~~~eI~d~--------~~~~~~ 67 (329)
.+||+++|+||++++|++.|.. .....+. +..+ ++|+++ .| +++|++++++++++. +..
T Consensus 239 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~--- 314 (449)
T 3qgu_A 239 RKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTG-VRLGWTVVPKALKYANGEPVHADWNR--- 314 (449)
T ss_dssp HHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTT-CCCEEEECCTTCBCTTSCBHHHHHHH---
T ss_pred HHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCcc-ceeEEEecCHHHHhhhhhhHHHHHHH---
Confidence 3679999999999999887632 2233332 2233 579998 78 499999999988752 221
Q ss_pred ccCCCCccchhhhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecC
Q psy7882 68 QILKTPAHKLKISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQD 138 (329)
Q Consensus 68 ~~~~~~~hg~T~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d 138 (329)
..+..+++.+ ++++++++. +. +++ .+++++..++|.+.|+++ +. .-+.. .|.++.+.+. +
T Consensus 315 -----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~-~~~~~~~~~~~~~~~~-~ 383 (449)
T 3qgu_A 315 -----VMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM----GF-SVYGGDDAPYIWVGFP-G 383 (449)
T ss_dssp -----HHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TC-CEEESSSSSEEEEECT-T
T ss_pred -----HhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC----CC-eeeCCCCeeEEEEECC-C
Confidence 1122233455 666555544 22 222 455666666777666654 32 22233 3666777764 1
Q ss_pred CCCCCCCChHHHHHHHHHHHHC-CceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 139 KETKVPLNSRHMTHILDSCKEH-GLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 139 ~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
. + ...+...|+++ ||++.++. ...+.+||. +.. ++++|+++++++
T Consensus 384 ~------~---~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis--~~~---~~e~i~~~l~~l 433 (449)
T 3qgu_A 384 K------P---SWDVFAEILERCNIVTTPGSGYGPAGEGFVRAS--AFG---SRENILEAVRRF 433 (449)
T ss_dssp S------C---HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE--CCS---CHHHHHHHHHHH
T ss_pred C------C---HHHHHHHHHHHCCEEEecchHhCCCCCCeEEEE--ecC---CHHHHHHHHHHH
Confidence 1 1 24577777775 99998742 135789987 433 689999999975
No 92
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=98.77 E-value=7.5e-08 Score=90.39 Aligned_cols=170 Identities=9% Similarity=-0.010 Sum_probs=97.0
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc------
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH------ 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h------ 75 (329)
.+||+++|.||+++++++. +..+.+|+... .+|.++|+ .++|++++++++.+.+.. ......+.+
T Consensus 171 ~~~~~~li~D~~~~~~~~~---~~~~~~~~d~~~~s~~K~l~~~-~G~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 244 (376)
T 3f0h_A 171 KKNNMFFVCDCVSAFLADP---FNMNECGADVMITGSQKVLACP-PGISVIVLAPRGVERVEK--SKVRTMYFDLKDALK 244 (376)
T ss_dssp HHTTCEEEEECTTTTTTSC---CCHHHHTCSEEEEETTTTTCCC-SSCEEEEECHHHHHHHHT--CCCCCSTTCHHHHHH
T ss_pred HHcCCEEEEEcCccccCcc---ccccccCccEEEecCcccccCC-CceEEEEECHHHHHHhhc--CCCCceeecHHHHHh
Confidence 3579999999999987664 34455666444 45999876 488999999999887653 000000000
Q ss_pred -----chhhhccH-HHHHHHHh-hHH------hH-HHHHHHHHHHHHHHHHHHHHhCCce-eeEEeeceeeEEEeecCCC
Q psy7882 76 -----KLKISDTV-RPHVQIKK-SVL------ER-FVHTYVVGNFLLTHLSKLREEFAIV-GDVRGKGLMIGVDLVQDKE 140 (329)
Q Consensus 76 -----g~T~agnl-A~aaala~-~il------e~-le~v~~lG~~L~~gL~eL~~~~p~v-~~VRG~GLm~gIef~~d~~ 140 (329)
+..++.+. +++++.+. +.+ ++ .++.+++.+++.+.|+ +.+.. ..-...+.++.+.. +.
T Consensus 245 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~~~~~~~~~~~~~--~~- 317 (376)
T 3f0h_A 245 NQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIK----DLPFELVSESPANGVTSVHP--TT- 317 (376)
T ss_dssp HHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTT----TSSEEECCSSBBTTEEEEEE--SS-
T ss_pred hcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----HcCCccCccccCceEEEEeC--CC-
Confidence 11222232 22222222 322 22 3344444444444443 33421 11012233333332 11
Q ss_pred CCCCCChHHHHHHHHHHHHC-CceeeccC--CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 141 TKVPLNSRHMTHILDSCKEH-GLLLGRGG--LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 141 ~~~p~~~~~~~~~~~~l~e~-GVLl~~~G--~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
. ....+.+.|.++ ||++.+.. ..++.+|+.|++.+ |++|++++++++
T Consensus 318 ----~---~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~---t~e~i~~~~~~l 367 (376)
T 3f0h_A 318 ----A---NAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGAL---THEDNTTLVNAF 367 (376)
T ss_dssp ----S---CHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSC---CHHHHHHHHHHH
T ss_pred ----C---CHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCC---CHHHHHHHHHHH
Confidence 0 134688888888 99998742 24689999998876 589999999985
No 93
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=98.76 E-value=6e-08 Score=93.53 Aligned_cols=169 Identities=7% Similarity=-0.101 Sum_probs=100.2
Q ss_pred ccceEEehhHhhchhccchh-hhh--cccCCcc----h-----HHHhhc-CCccccceeee---chhHHHhhhhhhhccC
Q psy7882 7 RDCGVVVSAVDFGSGDNGTY-LGF--QCLQICR----F-----VQKDFK-GSFWDKLIVHT---STCTFENFIKIKYQIL 70 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~-fA~--e~~GV~P----D-----i~KaLg-GG~~PigAv~~---~~eI~d~~~~~~~~~~ 70 (329)
||+++|+||++++|.+.|.. ... ...++.+ + ++|.++ .| +++|++++ ++++.+.+......
T Consensus 226 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~~~~-- 302 (430)
T 2x5f_A 226 TKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWG-FRVGFMTFGTSDQTTKEVLEAKVKG-- 302 (430)
T ss_dssp CEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGG-GCCEEEEEBCCCHHHHHHHHHHHHH--
T ss_pred CCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCC-CCeEEEEEecCCHHHHHHHHHHHhh--
Confidence 89999999999999877641 111 1112222 3 579997 67 59999999 99998877531000
Q ss_pred CCCccchhhhcc-HHHHHHHHh-h----HHhHH----HHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCC
Q psy7882 71 KTPAHKLKISDT-VRPHVQIKK-S----VLERF----VHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDK 139 (329)
Q Consensus 71 ~~~~hg~T~agn-lA~aaala~-~----ile~l----e~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~ 139 (329)
..++.+++.+ ++++++.+. + .++++ ++.++..++|.+.|++.....+ +.-+... |+++.+++. +.
T Consensus 303 --~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g-~~~~~~~~g~~~~~~~~-~~ 378 (430)
T 2x5f_A 303 --LIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSH-WQAYDFNSGYFMAIKVH-DV 378 (430)
T ss_dssp --HHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTT-EEECCCCBSSEEEEEES-SS
T ss_pred --hhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC-ceeeCCCceEEEEeCCC-CC
Confidence 1223556666 555444333 3 33222 2233333444444332110223 2222333 566777774 11
Q ss_pred CCCCCCChHHHHHHHHHHHH-CCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 140 ETKVPLNSRHMTHILDSCKE-HGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 140 ~~~~p~~~~~~~~~~~~l~e-~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+ ...+.+.|.+ +||++.+. ..+.+|+.++.+ ++++++++++++
T Consensus 379 ------~---~~~~~~~l~~~~gi~v~~g--~~~~iRis~~~~----~~e~i~~~~~~l 422 (430)
T 2x5f_A 379 ------D---PEALRKHLIDKYSIGVIAL--NATDIRIAFSCV----EKDDIPHVFDSI 422 (430)
T ss_dssp ------C---HHHHHHHHHHHHCEECEEC--SSSEEEEEGGGS----CGGGHHHHHHHH
T ss_pred ------C---HHHHHHHHHHhCCEEEecC--CCCeEEEEEecC----CHHHHHHHHHHH
Confidence 1 2457888887 99999885 357899998863 467899999875
No 94
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=98.75 E-value=3.6e-08 Score=93.46 Aligned_cols=164 Identities=8% Similarity=-0.124 Sum_probs=99.1
Q ss_pred ccccceEEehhHhhchhccc-hhhhhc--------ccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNG-TYLGFQ--------CLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILK 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG-~~fA~e--------~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~ 71 (329)
..||+++|.||++++|.++| ..++.. .++...+ ++|+++ .| +++|.+++++++.+.+..
T Consensus 198 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~------- 269 (396)
T 3jtx_A 198 DKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPG-LRSGFVAGDAELLKNFLL------- 269 (396)
T ss_dssp HHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGG-GCCEEEEECHHHHHHHHH-------
T ss_pred HHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcc-cceEEEEeCHHHHHHHHH-------
Confidence 35799999999999998877 333221 1344444 579865 45 599999999999887764
Q ss_pred CCccchhhhcc-HHHHHHHHh----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCC
Q psy7882 72 TPAHKLKISDT-VRPHVQIKK----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPL 145 (329)
Q Consensus 72 ~~~hg~T~agn-lA~aaala~----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~ 145 (329)
..+..+++.+ ++++++.+. +.+++ .++.++.-+++.+.|++ +..+... .-|+++.+++...
T Consensus 270 -~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~-~~~~~~~~~~~~~------- 336 (396)
T 3jtx_A 270 -YRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQ----VFDVKLP-DASFYIWLKVPDG------- 336 (396)
T ss_dssp -HHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTT----TSCCCCC-SSSSEEEEECTTS-------
T ss_pred -HHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----cCCccCC-CeeEEEEEECCCC-------
Confidence 2334555666 555444333 22222 23333333444444332 2112122 2377777877421
Q ss_pred ChHHHHHHHHHHH-HCCceeeccC----------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 146 NSRHMTHILDSCK-EHGLLLGRGG----------LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 146 ~~~~~~~~~~~l~-e~GVLl~~~G----------~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
....+...|+ ++||++.+.. ...+.+|+.... ++++|+++++++
T Consensus 337 ---~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~-----~~~~i~~~l~~l 391 (396)
T 3jtx_A 337 ---DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA-----DVATCVKAAEDI 391 (396)
T ss_dssp ---CHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC-----CHHHHHHHHHHH
Confidence 1234667775 5799997742 135799998653 589999999874
No 95
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=98.75 E-value=2.4e-08 Score=95.29 Aligned_cols=169 Identities=12% Similarity=-0.044 Sum_probs=101.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc-------
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA------- 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~------- 74 (329)
..||+++|+||+|+ | +..+..+.+|+... ..|+|+|+. ++|++.+++++++.+.+ .. ..++.
T Consensus 165 ~~~~~~li~D~~~~--g--~~~~~~~~~~~d~~~~s~~K~l~~~~-g~g~~~~~~~~~~~l~~--~~-~~~~~~~~~~~~ 236 (379)
T 3ke3_A 165 HSVGGLLVIDCIAS--G--CVWLDMKELGIDVLISAPQKGWSSTP-CAGLVMLSAAAIKKVES--TE-SNCFSLDLKQWL 236 (379)
T ss_dssp HHTTCEEEEECTTC--T--TCCCCHHHHTCSEEEECTTTTTCSCC-CEEEEEECHHHHHHHHT--CC-CSCSTTCHHHHH
T ss_pred HHcCCEEEEEeccc--C--CccccccccCCCEEEecchhhcCCCC-ceEEEEECHHHHHhhhc--CC-CCceeecHHHHH
Confidence 45799999999997 4 34566777887666 359998763 68999999999887653 01 01111
Q ss_pred ----------cchhhhcc-HHHHHHHHh-hHHh-----H-HHHHHHHHHHHHHHHHHHHHhCCceee-EEeeceeeEEEe
Q psy7882 75 ----------HKLKISDT-VRPHVQIKK-SVLE-----R-FVHTYVVGNFLLTHLSKLREEFAIVGD-VRGKGLMIGVDL 135 (329)
Q Consensus 75 ----------hg~T~agn-lA~aaala~-~ile-----~-le~v~~lG~~L~~gL~eL~~~~p~v~~-VRG~GLm~gIef 135 (329)
+..+++.+ .++++..+. ++++ + .++.+++.++|+++|+++ ....+.. ....+.+..+.+
T Consensus 237 ~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~--g~~~~~~~~~~~~~i~~~~~ 314 (379)
T 3ke3_A 237 TIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK--GIESVAAEGFEAPGVVVSYT 314 (379)
T ss_dssp HHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCBSBCTTCBCSSEEEEEC
T ss_pred HHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCEecCCccccCceEEEEcc
Confidence 11122444 333222233 4332 2 556677777787777765 2222211 011222333332
Q ss_pred ecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC-------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 136 VQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL-------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 136 ~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~-------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
. + .+ ..+.+.|.++||++.+... .++++|+.|+... |++||+++++++
T Consensus 315 ~-~--------~~--~~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~---t~~di~~~~~~l 369 (379)
T 3ke3_A 315 E-R--------DD--MHKGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLD---KLTDIDGTVERF 369 (379)
T ss_dssp S-C--------HH--HHSSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHH---HHTCHHHHHHHH
T ss_pred C-C--------cc--hHHHHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCC---CHHHHHHHHHHH
Confidence 1 1 11 1135678899999876421 1689999998876 578999999985
No 96
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=98.74 E-value=1e-07 Score=92.41 Aligned_cols=171 Identities=6% Similarity=-0.032 Sum_probs=103.0
Q ss_pred ccccceEEehhHhhchhccchhh-hhcccCCcch------HHHhhcCCccccceeeec-------hhHHHhhhhhhhccC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQICRF------VQKDFKGSFWDKLIVHTS-------TCTFENFIKIKYQIL 70 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~GV~PD------i~KaLgGG~~PigAv~~~-------~eI~d~~~~~~~~~~ 70 (329)
..+|+++|+||++++|+++|..+ ....++..++ ++|.++...+++|+++++ +++.+.+..
T Consensus 221 ~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~------ 294 (427)
T 3dyd_A 221 ARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVK------ 294 (427)
T ss_dssp HHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHH------
T ss_pred HHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHH------
Confidence 46799999999999999888543 5555666665 469854333599999988 467666543
Q ss_pred CCCccchhhhcc-HHHHHHHHh-h-----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCC
Q psy7882 71 KTPAHKLKISDT-VRPHVQIKK-S-----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKET 141 (329)
Q Consensus 71 ~~~~hg~T~agn-lA~aaala~-~-----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~ 141 (329)
.+..+++.+ ++++++.+. + .+++ .++++++.+++.+.|++ +|.+..++.. |+++.+.+.....
T Consensus 295 ---~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~p~~g~~~~~~l~~~~~- 366 (427)
T 3dyd_A 295 ---LSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAA----IPGLRPVRPSGAMYLMVGIEMEHF- 366 (427)
T ss_dssp ---HHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH----STTEEEECCSBTTEEEEEECGGGC-
T ss_pred ---HHhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhc----CCCceecCCCeeEEEEEecCHhhc-
Confidence 122355566 554444333 2 2222 44455555555555543 4555444444 5556666642110
Q ss_pred CCCCChHHHHHHHHHHH-HCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCK-EHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~-e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
| +......++..|+ ++||++.++.. ..+.+|+. +.+ ++++|+++++++
T Consensus 367 --~-~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis--~~~---~~e~i~~~l~~l 417 (427)
T 3dyd_A 367 --P-EFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVV--ITV---PEVMMLEACSRI 417 (427)
T ss_dssp --T-TCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEE--SCS---CHHHHHHHHHHH
T ss_pred --C-CCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEE--ECC---CHHHHHHHHHHH
Confidence 0 0011345677775 89999987431 35789987 333 689999999875
No 97
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.73 E-value=3.8e-08 Score=93.84 Aligned_cols=164 Identities=12% Similarity=0.003 Sum_probs=107.1
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCC--cch-----HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI--CRF-----VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV--~PD-----i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
..+|+++|.||+++++...|.......+.- ..| ++|.++ .| +++|++++++++++.+.. ..++
T Consensus 204 ~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~l~~~~~~~~~l~~--------~~~~ 274 (389)
T 1o4s_A 204 KKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTG-WRVGYLISSEKVATAVSK--------IQSH 274 (389)
T ss_dssp HHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHH--------HHHH
T ss_pred HHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcc-cceEEEEeCHHHHHHHHH--------Hhhh
Confidence 357999999999999877664322222221 123 469997 66 599999999999887763 2334
Q ss_pred hhhhcc-HHHHHHHHh-h-HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 77 LKISDT-VRPHVQIKK-S-VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 77 ~T~agn-lA~aaala~-~-ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
.+++.+ ++++++.+. + .+++ .+++++..+++.+.|+++ ....+. - .-|+++.+.+. . + ...
T Consensus 275 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~-~-~~~~~~~~~~~--~------~---~~~ 339 (389)
T 1o4s_A 275 TTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKM--GVKFVE-P-EGAFYLFFKVR--G------D---DVK 339 (389)
T ss_dssp HTCSCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCC-C-SBSSEEEEECS--S------C---HHH
T ss_pred cccCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc--CCeeec-C-CcceEEEEeCC--C------C---HHH
Confidence 456666 655555443 2 1333 667888888888888875 233221 1 12566666663 0 1 245
Q ss_pred HHHHHH-HCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCK-EHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~-e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.+.|+ ++||++.++.. .++.+|+.++. ++++|+++++.+
T Consensus 340 l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~-----~~~~l~~~l~~l 382 (389)
T 1o4s_A 340 FCERLLEEKKVALVPGSAFLKPGFVRLSFAT-----SIERLTEALDRI 382 (389)
T ss_dssp HHHHHHHHHCEECEEGGGGTCTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEeCchhcCCCCeEEEEEeC-----CHHHHHHHHHHH
Confidence 778887 89999987421 14689999872 578999999874
No 98
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=98.72 E-value=1.7e-07 Score=88.93 Aligned_cols=173 Identities=14% Similarity=0.049 Sum_probs=103.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch----
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL---- 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~---- 77 (329)
..||+++|+||+++. |.. .+..+.+++... ..|.++|+. ++|++++++++.+.+.. .....+..||+
T Consensus 165 ~~~~~~li~Dea~~~-~~~--~~~~~~~~~d~~~~s~~K~l~~~~-g~g~~~~~~~~~~~~~~--~~~~~~~~~g~~~~g 238 (411)
T 3nnk_A 165 RRYDALFYTDATASL-GGN--PLETDVWGLDAVSAGMQKCLGGPS-GTSPITLSARMEEAIRR--RKCVEEGIRTDAHRD 238 (411)
T ss_dssp HHHTCEEEEECTTTB-TTB--CCCTTTTTCSEEECCSTTTTCCCS-SEEEEEECHHHHHHHHT--TCCCCGGGCCTTCCC
T ss_pred HHcCCEEEEECCccc-CCc--ccchhccCCcEEEecCccccCCCC-ceEEEEECHHHHHHHhh--ccccccccccccccc
Confidence 357999999999763 221 233344443333 459998875 89999999999887653 11000001110
Q ss_pred --------------------------hhhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHHHHHHHhCCcee-
Q psy7882 78 --------------------------KISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHLSKLREEFAIVG- 122 (329)
Q Consensus 78 --------------------------T~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL~eL~~~~p~v~- 122 (329)
+++.+ .++++..+. +. +++ .++..++.+++.+.|+++ ......
T Consensus 239 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~ 316 (411)
T 3nnk_A 239 GDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM--GLETFGD 316 (411)
T ss_dssp CSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCBCSC
T ss_pred ccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCEeCCC
Confidence 11223 233222222 22 233 667788888888888775 222221
Q ss_pred eEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHC-CceeeccC--CCCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882 123 DVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEH-GLLLGRGG--LSGNTLTALQ-PKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 123 ~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G--~~~nvIrl~P-PL~It~~t~eeId~~l~~~ 197 (329)
.....+.+..+.+.... + ...+.+.|.++ ||++.+.. ..++.+|+.+ +++. +++|++++++++
T Consensus 317 ~~~~~~~~~~~~~~~~~------~---~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~---~~~~i~~~~~~l 383 (411)
T 3nnk_A 317 LKHKMNNVLGVVIPQGI------N---GDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNA---RKDCVMTTLSAL 383 (411)
T ss_dssp GGGBCSSEEEEECCTTC------C---HHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGC---SHHHHHHHHHHH
T ss_pred cccccccEEEEECCCCC------C---HHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcC---CHHHHHHHHHHH
Confidence 11235677777763211 1 34577888876 99998631 2357999998 8776 579999999985
No 99
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=98.71 E-value=9.4e-08 Score=89.14 Aligned_cols=158 Identities=10% Similarity=-0.028 Sum_probs=101.9
Q ss_pred cccceEEehhHhhchhccchhh---h-hccc-CCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYL---G-FQCL-QICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~f---A-~e~~-GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
.+|+++|+||+++++.+.|... . ...+ +.... ++|.++ .| +++|.+++++++.+.+.. ..+.
T Consensus 171 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~--------~~~~ 241 (354)
T 3ly1_A 171 PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAG-MRVGYAVAHPTVIALMGR--------YVAG 241 (354)
T ss_dssp CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGG-GCCEEEECCHHHHHHHGG--------GTTC
T ss_pred CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChh-hhheeeecCHHHHHHHHH--------hcCC
Confidence 4799999999999998776321 1 1222 32233 569997 67 499999999999887763 1111
Q ss_pred hhhhcc-HHHHHHHHh----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHH
Q psy7882 77 LKISDT-VRPHVQIKK----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHM 150 (329)
Q Consensus 77 ~T~agn-lA~aaala~----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~ 150 (329)
++.+ ++++++.+. +.+++ .++.+++.+++.+.|+++ + +..+.+.|.++.+++..+ .
T Consensus 242 --~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----~-~~~~~~~~~~~~~~~~~~-----------~ 303 (354)
T 3ly1_A 242 --EKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL----K-LPYLPSEGNFVFHQLVVP-----------L 303 (354)
T ss_dssp --SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH----T-CCBCCCCSSEEEEECSSC-----------H
T ss_pred --CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC----C-CeECCCCceEEEEECCCC-----------H
Confidence 4455 444444333 33333 455666666666666654 2 223356788887777421 3
Q ss_pred HHHHHHHHHCCceeeccC--CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGG--LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G--~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+.+.|.++||++. .. ...+.+|+... +++|++++++++
T Consensus 304 ~~~~~~l~~~gi~v~-g~~~~~~~~iRis~~------~~~~i~~~~~~l 345 (354)
T 3ly1_A 304 KDYQTHMADAGVLIG-RAFPPADNWCRISLG------TPQEMQWVADTM 345 (354)
T ss_dssp HHHHHHHHHTTEECC-CCCTTCTTEEEEECC------CHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEe-ecCCCCCCEEEEEcC------CHHHHHHHHHHH
Confidence 457888899999987 21 13578999832 578999999975
No 100
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=98.71 E-value=1.5e-07 Score=90.99 Aligned_cols=172 Identities=10% Similarity=0.014 Sum_probs=100.4
Q ss_pred ccccceEEehhHhhchhccch----hhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT----YLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~----~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
..||+++|.||+++++...|. +.+....+.... ++|.++.| +++|.+++++++++.+.. ..+..
T Consensus 221 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~G-lRiG~~~~~~~l~~~l~~--------~~~~~ 291 (425)
T 2r2n_A 221 RKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSG-LRIGFLTGPKPLIERVIL--------HIQVS 291 (425)
T ss_dssp HHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCST-TCCEEEEEEHHHHHHHHH--------HHHTT
T ss_pred HHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCc-cceEEEecCHHHHHHHHH--------HHHHh
Confidence 357999999999999876663 222222222233 57999988 599999999999887763 12233
Q ss_pred hhhcc-HHHHHHHHh-hHHh--H-HHHHHHHHHHHHH---HHHHHHHh-CCceee--EEeeceeeEEEeecCCCCCCCCC
Q psy7882 78 KISDT-VRPHVQIKK-SVLE--R-FVHTYVVGNFLLT---HLSKLREE-FAIVGD--VRGKGLMIGVDLVQDKETKVPLN 146 (329)
Q Consensus 78 T~agn-lA~aaala~-~ile--~-le~v~~lG~~L~~---gL~eL~~~-~p~v~~--VRG~GLm~gIef~~d~~~~~p~~ 146 (329)
+++.+ ++++++.+. +.+. . .++++++.+++++ .|.+..++ .|.+.. ...-|+++.+++.... +
T Consensus 292 ~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~------~ 365 (425)
T 2r2n_A 292 TLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGIN------D 365 (425)
T ss_dssp TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCS------C
T ss_pred cCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCC------C
Confidence 45555 554444333 2210 0 1233333333322 22222222 333222 2345788888885311 1
Q ss_pred hHHHHHHHHHHHHCCceeeccCC-------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCKEHGLLLGRGGL-------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~e~GVLl~~~G~-------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
. ...+.+.|.++||++.++.. ..+.+|+.... . ++++++++++++
T Consensus 366 ~--~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~-~---~~~~i~~~~~~l 417 (425)
T 2r2n_A 366 V--KELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS-A---SPEQMDVAFQVL 417 (425)
T ss_dssp C--HHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS-C---CHHHHHHHHHHH
T ss_pred H--HHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC-C---CHHHHHHHHHHH
Confidence 1 12256778899999987421 13789998763 2 589999999875
No 101
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=98.69 E-value=4e-08 Score=94.04 Aligned_cols=167 Identities=8% Similarity=-0.007 Sum_probs=101.4
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCc-ch-----HHHhhc-CCccccceee--ech----hHHHhhhhhhhccCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQIC-RF-----VQKDFK-GSFWDKLIVH--TST----CTFENFIKIKYQILK 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~-PD-----i~KaLg-GG~~PigAv~--~~~----eI~d~~~~~~~~~~~ 71 (329)
..+|+++|.||+++++.+.|.......++-. || ++|.++ .| +++|+++ +++ ++++.+.. ..
T Consensus 204 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~l~~~l~~--~~--- 277 (406)
T 1xi9_A 204 GEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATG-WRLGYMYFVDPENKLSEVREAIDR--LA--- 277 (406)
T ss_dssp HHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGG-GCCEEEEEECTTCTTHHHHHHHHH--HH---
T ss_pred HHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccCCCc-cEEEEEEEecCchhHHHHHHHHHH--HH---
Confidence 3579999999999998774444344444311 14 369997 56 5999998 888 88887753 11
Q ss_pred CCccchhhhcc-HHHH---HHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCC
Q psy7882 72 TPAHKLKISDT-VRPH---VQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKV 143 (329)
Q Consensus 72 ~~~hg~T~agn-lA~a---aala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~ 143 (329)
+.. ++.+ ++++ ++++. +.+++ .++++++.+++.+.|++ .|.+.-++.. |++..+.+.....
T Consensus 278 ---~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~~~~~--- 346 (406)
T 1xi9_A 278 ---RIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNE----IPGISTTKPQGAFYIFPKIEVGPW--- 346 (406)
T ss_dssp ---HHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHT----STTEECCCCCBSSEECCEECSCSC---
T ss_pred ---Hhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHh----CCCCeeecCCeeEEEEEecCccCC---
Confidence 111 3344 3333 33432 22333 45666777777666654 3333323333 4555556632100
Q ss_pred CCChHHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 144 PLNSRHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 144 p~~~~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+ ...+.+.|+ ++||++.++.. ..+.+|+.++ . ++++|+++++++
T Consensus 347 -~~---~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~--~---~~~~i~~~~~~l 396 (406)
T 1xi9_A 347 -KN---DKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL--P---PIEILEEAMDRF 396 (406)
T ss_dssp -SS---HHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC--S---CHHHHHHHHHHH
T ss_pred -CC---HHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec--C---CHHHHHHHHHHH
Confidence 01 345777787 89999987531 1578999987 3 588999999875
No 102
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=98.67 E-value=2.6e-07 Score=88.71 Aligned_cols=170 Identities=11% Similarity=-0.046 Sum_probs=98.2
Q ss_pred ccccceEEehhHhhchhcc-------chhhhhc----ccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccC
Q psy7882 5 YYRDCGVVVSAVDFGSGDN-------GTYLGFQ----CLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL 70 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRT-------G~~fA~e----~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~ 70 (329)
..||+++|.||+++.+... ..+++.. ..+.... ++|.+.+| +++|.+++++++++.+..
T Consensus 204 ~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G-~r~G~~~~~~~~~~~~~~------ 276 (423)
T 3ez1_A 204 AAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAG-AGLGFVASSEDNIRWLSK------ 276 (423)
T ss_dssp SSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSS-SSCEEEEECHHHHHHHHH------
T ss_pred hccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCC-cceEEEEeCHHHHHHHHH------
Confidence 5789999999999943222 2233321 2222222 56987778 599999999999887764
Q ss_pred CCCccchhhhcc-HHHHHH---HHh--hHHhH-----HHHHHHHHHHHHHHHHHHHHhCC-cee-eEEeeceeeEEEeec
Q psy7882 71 KTPAHKLKISDT-VRPHVQ---IKK--SVLER-----FVHTYVVGNFLLTHLSKLREEFA-IVG-DVRGKGLMIGVDLVQ 137 (329)
Q Consensus 71 ~~~~hg~T~agn-lA~aaa---la~--~ile~-----le~v~~lG~~L~~gL~eL~~~~p-~v~-~VRG~GLm~gIef~~ 137 (329)
..+..+++.+ +++.++ ++. +.+++ .+..++.-+.+.+.|.+.....+ .+. ....-|+++.+++..
T Consensus 277 --~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~ 354 (423)
T 3ez1_A 277 --YLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAE 354 (423)
T ss_dssp --HHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESS
T ss_pred --HHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCC
Confidence 1223334444 433333 332 22211 11222223333344443322233 121 122457888888853
Q ss_pred CCCCCCCCChHHHHHHHHHHHHCCceeeccC--------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 138 DKETKVPLNSRHMTHILDSCKEHGLLLGRGG--------LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 138 d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G--------~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
. ....+...|.++||++.++| ...+.+||.++.. ++++|+++++++
T Consensus 355 ~----------~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~----~~~~i~~~~~~l 408 (423)
T 3ez1_A 355 P----------VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP----PVEEVRTAMQVV 408 (423)
T ss_dssp S----------CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS----CHHHHHHHHHHH
T ss_pred C----------cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC----CHHHHHHHHHHH
Confidence 1 13457788899999998843 1357899998654 379999999975
No 103
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=98.66 E-value=1.7e-07 Score=89.15 Aligned_cols=167 Identities=10% Similarity=-0.021 Sum_probs=102.7
Q ss_pred ccccceEEehhHhh-c-hhccchhhhhcccCCc--ch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDF-G-SGDNGTYLGFQCLQIC--RF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqT-G-fGRTG~~fA~e~~GV~--PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..||+++|+||+++ | +|++|..+. ..+++. +| ++|+++. |-|.+++++++.+.+....... ...
T Consensus 205 ~~~~~~li~Dea~~~g~~~~~g~~~~-~~~~~~~~~~i~~~s~sK~~~~---~GG~~~~~~~~~~~l~~~~~~~---~~~ 277 (401)
T 2bwn_A 205 EEFGALTYIDEVHAVGMYGPRGAGVA-ERDGLMHRIDIFNGTLAKAYGV---FGGYIAASARMVDAVRSYAPGF---IFS 277 (401)
T ss_dssp HHHTCEEEEECTTTTTTSSTTSCCHH-HHHTCGGGCSEEEEESSSTTCS---CCEEEEECHHHHHHHHHHCHHH---HTS
T ss_pred HHcCCEEEEeccccccccCCCCceee-eccCccccCcEEEeechhhccC---CCCEEecCHHHHHHHHHhCcCc---eec
Confidence 35799999999999 3 577776554 556653 35 5699982 1155677888877654200000 001
Q ss_pred chhhhccHHHHHHHHh-hHH-----hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882 76 KLKISDTVRPHVQIKK-SVL-----ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 76 g~T~agnlA~aaala~-~il-----e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~ 148 (329)
++| .+++++++.+. +.+ ++ .++++++.+++.+.|+++ ....+. ..|.++.+.+.. ..
T Consensus 278 ~~~--~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~---~~~~~~~~~~~~---------~~ 341 (401)
T 2bwn_A 278 TSL--PPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL--GMPIID---HGSHIVPVVIGD---------PV 341 (401)
T ss_dssp BCC--CHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH--TCCBCC---CSSSCEEEECCC---------HH
T ss_pred CCC--CHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC--CCcccC---CCCCeEEEEeCC---------hH
Confidence 111 11344333333 332 33 667888888999888876 333321 234577777642 12
Q ss_pred HHHHHHHHHH-HCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCK-EHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~-e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
....+.+.|+ ++||++.+... ..+.+|+.+++.. +++|++++++++
T Consensus 342 ~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~---t~~~i~~~~~~l 393 (401)
T 2bwn_A 342 HTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVH---DLKQIDGLVHAM 393 (401)
T ss_dssp HHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTS---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCC---CHHHHHHHHHHH
Confidence 2456788886 78999976431 1258999998765 589999999975
No 104
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=98.66 E-value=2.3e-07 Score=86.06 Aligned_cols=172 Identities=10% Similarity=0.007 Sum_probs=105.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc-----
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA----- 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~----- 74 (329)
.+||+++|+||+++ +|... +..+. ..+| ++|+++|+. ++|++++++++++.+.. .. .....
T Consensus 158 ~~~~~~li~Dea~~-~~~~~--~~~~~--~~~di~~~s~~K~~~~~~-g~G~~~~~~~~~~~~~~--~~-~~~~~~~~~~ 228 (366)
T 1m32_A 158 HRYGKTYIVDAMSS-FGGIP--MDIAA--LHIDYLISSANKCIQGVP-GFAFVIAREQKLAACKG--HS-RSLSLDLYAQ 228 (366)
T ss_dssp HHHTCEEEEECTTT-TTTSC--CCTTT--TTCSEEEEESSSTTCCCS-SEEEEEEEHHHHTTCTT--CC-SCSTTCHHHH
T ss_pred HHcCCEEEEECCcc-ccCcC--ccccc--cCccEEEecCcccccCCC-ceEEEEECHHHHHhhcC--CC-CCccccHHHH
Confidence 35799999999997 44432 11222 2377 359998874 78999999998876542 00 00000
Q ss_pred -c------c-hhhhcc-HHHHHHHHh-hH------HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEee
Q psy7882 75 -H------K-LKISDT-VRPHVQIKK-SV------LER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLV 136 (329)
Q Consensus 75 -h------g-~T~agn-lA~aaala~-~i------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~ 136 (329)
+ + ..++.+ .+++++.+. +. +++ .++.+++.+++.+.|+++ ........ ...|.++.+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~ 306 (366)
T 1m32_A 229 WRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL--GFNTLLDDELHSPIITAFYSP 306 (366)
T ss_dssp HHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT--TCCBSSCGGGBCSSEEEEECC
T ss_pred HhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC--CCeeccCchhcCceEEEEEcC
Confidence 0 0 024455 444333333 22 333 667788888888888775 23322211 124668888874
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHCCceeeccCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 137 QDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.... . ....+.+.|.++||++.+... ..+.+|+.++... +++|++++++++
T Consensus 307 ~~~~----~---~~~~~~~~l~~~gi~v~~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l 358 (366)
T 1m32_A 307 EDPQ----Y---RFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEV---YAADITALLTAI 358 (366)
T ss_dssp CCTT----C---CHHHHHHHHHHTTEECEECCCSSSCEEEEECCSSC---CHHHHHHHHHHH
T ss_pred ccCC----C---CHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCC---CHHHHHHHHHHH
Confidence 2100 0 135688889999999987432 3579999998765 589999999875
No 105
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=98.65 E-value=2.3e-07 Score=86.97 Aligned_cols=160 Identities=11% Similarity=0.073 Sum_probs=99.3
Q ss_pred cccceEEehhHhhchh---ccch----hhhhcccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882 6 YRDCGVVVSAVDFGSG---DNGT----YLGFQCLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 6 ~~giLLI~DEVqTGfG---RTG~----~fA~e~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~ 74 (329)
.+|+++|.||+++++. ..+. ....+.++.... ++|.++ .| +++|.+++++++.+.+.. .
T Consensus 183 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~--~------- 252 (365)
T 3get_A 183 NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGG-LRIGYGIANANIISAFYK--L------- 252 (365)
T ss_dssp CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTT-TCCEEEEECHHHHHHHHH--H-------
T ss_pred CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcc-hheEEEEcCHHHHHHHHH--h-------
Confidence 3599999999999886 3221 111122222222 569997 67 599999999999887763 1
Q ss_pred cchhhhcc-HHHHH---HHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882 75 HKLKISDT-VRPHV---QIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 75 hg~T~agn-lA~aa---ala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~ 148 (329)
..+|+.+ +++++ +++. +.+++ .++.++..+++.+.|+++ + +..+.+.|.++.+.+...
T Consensus 253 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----g-~~~~~~~~~~~~~~~~~~---------- 316 (365)
T 3get_A 253 -RAPFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH----N-IKIIDSYTNFITYFFDEK---------- 316 (365)
T ss_dssp -SCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT----T-CEECCCSSSEEEEECSSS----------
T ss_pred -cCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC----C-CEECCCCCeEEEEECCCC----------
Confidence 1123444 44333 3333 33333 445555555666655543 3 223456677777776421
Q ss_pred HHHHHHHHHHHCCceeeccCCC-CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCKEHGLLLGRGGLS-GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~e~GVLl~~~G~~-~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
....+.+.|.++||++.+.... .+.+|+... +++|++++++++
T Consensus 317 ~~~~~~~~l~~~gi~v~~g~~~~~~~iRis~~------~~~~i~~l~~~l 360 (365)
T 3get_A 317 NSTDLSEKLLKKGIIIRNLKSYGLNAIRITIG------TSYENEKFFTEF 360 (365)
T ss_dssp CHHHHHHHHHTTTEECEECGGGTCSEEEEECC------CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCEEEEECccCCCCEEEEEcC------CHHHHHHHHHHH
Confidence 1345788899999999875322 588999854 579999999875
No 106
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=98.63 E-value=3.3e-07 Score=88.55 Aligned_cols=169 Identities=14% Similarity=0.056 Sum_probs=101.9
Q ss_pred cccceEEehhHhh--chhccchh-hhh-------cccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCC
Q psy7882 6 YRDCGVVVSAVDF--GSGDNGTY-LGF-------QCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKT 72 (329)
Q Consensus 6 ~~giLLI~DEVqT--GfGRTG~~-fA~-------e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~ 72 (329)
+||+++|.||++. +|+..|.. ... +..+...+ ++|.++.| +++|.+++++++.+.+..
T Consensus 211 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G-lriG~~~~~~~l~~~l~~-------- 281 (422)
T 3d6k_A 211 APDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAG-SGVSFFASSKENIEWYAS-------- 281 (422)
T ss_dssp STTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTT-SSCEEEECCHHHHHHHHH--------
T ss_pred ccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcc-cceEEEEeCHHHHHHHHH--------
Confidence 6899999999997 57655421 111 12333344 57987777 599999999999887764
Q ss_pred Cccchhhhcc-HHHHHHHHh----hHHhH-----HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCC
Q psy7882 73 PAHKLKISDT-VRPHVQIKK----SVLER-----FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKET 141 (329)
Q Consensus 73 ~~hg~T~agn-lA~aaala~----~ile~-----le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~ 141 (329)
..+..+++.+ ++++++.+. +.+++ .+.+++.-+++.+.|++.....+.+.-+. .-|+++.+++...
T Consensus 282 ~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~--- 358 (422)
T 3d6k_A 282 HANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG--- 358 (422)
T ss_dssp HHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTT---
T ss_pred HHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCC---
Confidence 1223344455 444443332 11211 22233344455555555433333222222 2477788887421
Q ss_pred CCCCChHHHHHHHHHHHHCCceeeccCC--------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCKEHGLLLGRGGL--------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~e~GVLl~~~G~--------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+ ...+...+.++||++.++|. ..+.+||.+.. . ++++++++++++
T Consensus 359 ----~---~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~-~---~~e~i~~~~~~l 411 (422)
T 3d6k_A 359 ----T---ASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSL-P---PVAELEVAMDGF 411 (422)
T ss_dssp ----C---HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS-S---CHHHHHHHHHHH
T ss_pred ----C---HHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCC-C---CHHHHHHHHHHH
Confidence 1 23467788899999988431 24789999876 4 589999999975
No 107
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=98.63 E-value=2e-07 Score=89.51 Aligned_cols=166 Identities=9% Similarity=-0.023 Sum_probs=104.0
Q ss_pred ccccceEEehhHhhchhccchh---------hhhcc-cCCcch---HHHhhc-CCccccceeeechhHHH-h--------
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTY---------LGFQC-LQICRF---VQKDFK-GSFWDKLIVHTSTCTFE-N-------- 61 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~---------fA~e~-~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d-~-------- 61 (329)
..||+++|+||+++++...|.. ..+.. .+.... ++|.++ .| +++|++++++++++ .
T Consensus 212 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~ 290 (437)
T 3g0t_A 212 TKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAG-QRIGVLMISGKLYEREYPDLEESF 290 (437)
T ss_dssp HHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGG-GCCEEEEECHHHHHCBCGGGHHHH
T ss_pred HHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCcc-ceeEEEEECHHHhhhhhhcccccc
Confidence 3579999999999987554321 11111 121111 569998 77 49999999999988 6
Q ss_pred ---------hhhhhhccCCCCccchhhhcc-HHHHHHHHh-hH-------HhH-HHHHHHHHHHHHHHHHHHHHhCCcee
Q psy7882 62 ---------FIKIKYQILKTPAHKLKISDT-VRPHVQIKK-SV-------LER-FVHTYVVGNFLLTHLSKLREEFAIVG 122 (329)
Q Consensus 62 ---------~~~~~~~~~~~~~hg~T~agn-lA~aaala~-~i-------le~-le~v~~lG~~L~~gL~eL~~~~p~v~ 122 (329)
+.. ..+..+++.+ ++++++.+. +. +++ .+++++..+++.+.|+++ +...
T Consensus 291 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~ 358 (437)
T 3g0t_A 291 GRLRFGEALSSS--------ALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN----GFNI 358 (437)
T ss_dssp SCSBHHHHHHTT--------HHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT----TEEE
T ss_pred cccchhHHHHHH--------HHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc----CCEE
Confidence 331 2334556666 555444433 21 333 566677777777777654 3211
Q ss_pred e------EE-eeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC---C-CCEEEEeCccccCcCCHHHHH
Q psy7882 123 D------VR-GKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL---S-GNTLTALQPKLLNYWTDFVGT 191 (329)
Q Consensus 123 ~------VR-G~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~---~-~nvIrl~PPL~It~~t~eeId 191 (329)
. .. ..|.++.+.+. +. + ...+.+.|.++||++.+... . ++.+|+.++.+ +++||+
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~-~~------~---~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~----~~e~i~ 424 (437)
T 3g0t_A 359 VYDKDGNEPLADGFYFTVGYK-GM------D---SSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLL----PESQFP 424 (437)
T ss_dssp SSCEETTEECCSSSEEEEEET-TC------C---HHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSS----CGGGHH
T ss_pred eccccCCCCCceeEEEEEecC-CC------C---HHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecC----CHHHHH
Confidence 1 23 55777777774 11 1 34588889999999987432 1 16799988743 468999
Q ss_pred HHHhcc
Q psy7882 192 PCLDCE 197 (329)
Q Consensus 192 ~~l~~~ 197 (329)
++++++
T Consensus 425 ~~~~~l 430 (437)
T 3g0t_A 425 DLEKRL 430 (437)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
No 108
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=98.63 E-value=3.1e-07 Score=88.57 Aligned_cols=164 Identities=5% Similarity=-0.111 Sum_probs=97.5
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechhH--------HHhhhhhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCT--------FENFIKIKYQ 68 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI--------~d~~~~~~~~ 68 (329)
..||+++|+||++++|...+.......+.-.+| ++|+++ .| +++|.+++++++ .+.+..
T Consensus 228 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~---- 302 (432)
T 3ei9_A 228 KKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTG-VRLGWTVIPKKLLYSDGFPVAKDFNR---- 302 (432)
T ss_dssp HHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTT-TCCEEEECCTTCBCTTSCBHHHHHHH----
T ss_pred HHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcc-cceEEEEEChHHhhcchHHHHHHHHH----
Confidence 467999999999999866554333333322233 579998 88 499999999887 454442
Q ss_pred cCCCCccchhhhcc-HHHHHHHHh-h-----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCC
Q psy7882 69 ILKTPAHKLKISDT-VRPHVQIKK-S-----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDK 139 (329)
Q Consensus 69 ~~~~~~hg~T~agn-lA~aaala~-~-----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~ 139 (329)
..+..+++.+ ++++++++. . .+++ .+++++..++|.+.|+++ +. .-+.+ .|.++.+.+. +.
T Consensus 303 ----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~-~~~~~~~~~~~~~~~~-~~ 372 (432)
T 3ei9_A 303 ----IICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL----GY-DVYGGKNAPYVWVHFP-NQ 372 (432)
T ss_dssp ----HHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TC-CEEECSSSSEEEEECT-TS
T ss_pred ----HhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC----Cc-eecCCCcceEEEEECC-CC
Confidence 1111223344 444444333 1 1222 455566666666666654 22 22232 4566666664 11
Q ss_pred CCCCCCChHHHHHHHHHHHH-CCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 140 ETKVPLNSRHMTHILDSCKE-HGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 140 ~~~~p~~~~~~~~~~~~l~e-~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+ ...+...+++ +||++.+.. ...+.+|+. +.. ++++|+++++.+
T Consensus 373 ------~---~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis--~~~---~~e~l~~~l~rl 421 (432)
T 3ei9_A 373 ------S---SWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVS--AFG---HRENILEACRRF 421 (432)
T ss_dssp ------C---HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE--CCS---CHHHHHHHHHHH
T ss_pred ------C---HHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEE--ecC---CHHHHHHHHHHH
Confidence 1 2346666665 599998742 135789998 333 689999999975
No 109
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=98.62 E-value=2.4e-07 Score=88.62 Aligned_cols=165 Identities=7% Similarity=-0.120 Sum_probs=100.9
Q ss_pred ccccceEEehhHhhchhccchh-hhhcccCCcch-------HHHhhc-CCccccceeeechhH-------HHhhhhhhhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCT-------FENFIKIKYQ 68 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI-------~d~~~~~~~~ 68 (329)
..+|+++|+||++++|+..|.. .....++-.+| ++|.++ .| +++|.+++++++ .+.+..
T Consensus 193 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-lriG~~~~~~~~~~~~~~~~~~~~~---- 267 (400)
T 3asa_A 193 IEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAG-IRLGWTVIPQELTYADGHFVIQDWE---- 267 (400)
T ss_dssp HHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTT-CCCEEEECCTTCBCTTSCBHHHHHH----
T ss_pred HHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcc-hheeEEeeChhhccchhhhHHHHHH----
Confidence 3579999999999999776641 22223322244 469998 88 499999999887 444431
Q ss_pred cCCCCccchhh-hcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEE-eecCCC
Q psy7882 69 ILKTPAHKLKI-SDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVD-LVQDKE 140 (329)
Q Consensus 69 ~~~~~~hg~T~-agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIe-f~~d~~ 140 (329)
..+..++ +.+ ++++++.+. ..+++ .+++++..++|.+.|+++ +. .-+.+ .|.++.++ +....
T Consensus 268 ----~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~----g~-~~~~~~~~~~~~~~~~~~~~- 337 (400)
T 3asa_A 268 ----RFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT----GF-EVFGGEHAPYLWVKPTQANI- 337 (400)
T ss_dssp ----HHHHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT----TC-EEEECSSSSEEEEECCCTTC-
T ss_pred ----HHhccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC----CC-eeeCCCCceEEEEeccCCCC-
Confidence 1223344 344 444443333 21333 567778888888887764 22 22333 36777777 53211
Q ss_pred CCCCCChHHHHHHHHHHHH-CCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 141 TKVPLNSRHMTHILDSCKE-HGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 141 ~~~p~~~~~~~~~~~~l~e-~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+ ...+...+++ +||++.++.. ..+.+|+. +.. ++++++++++++
T Consensus 338 -----~---~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis--~~~---~~e~i~~~l~~l 386 (400)
T 3asa_A 338 -----S---DRDLFDFFLREYHIAITPGIGFGRSGSGFVRFS--SLG---KREDILAACERL 386 (400)
T ss_dssp -----C---TTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEE--CCS---CHHHHHHHHHHH
T ss_pred -----C---HHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEE--eeC---CHHHHHHHHHHH
Confidence 1 1136666664 5999987421 24679987 333 689999999875
No 110
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=98.60 E-value=2.1e-07 Score=88.52 Aligned_cols=169 Identities=8% Similarity=0.041 Sum_probs=97.3
Q ss_pred ccccceEEehhHh-hchhccchhhhhcccCCcch-----HHHhhcCCccccceeeech---hHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVD-FGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTST---CTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVq-TGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~---eI~d~~~~~~~~~~~~~~h 75 (329)
.+||+++|+||++ +|+.++|.+... .. .+| ++|+++|. ..|.+++++ ++++.+.. ..+
T Consensus 194 ~~~~~~li~De~~~~~~~~~~~~~~~--~~-~~di~~~s~sK~~~g~--~gg~~~~~~~~~~~~~~~~~--------~~~ 260 (420)
T 3gbx_A 194 DSIGAYLFVDMAHVAGLIAAGVYPNP--VP-HAHVVTTTTHKTLAGP--RGGLILAKGGDEELYKKLNS--------AVF 260 (420)
T ss_dssp HHTTCEEEEECTTTHHHHHTTSSCCS--TT-TSSEEEEESSGGGCSC--SCEEEEESSCCHHHHHHHHH--------HHC
T ss_pred HHcCCEEEEECCcchhceecccCCcc--cc-cCCEEEeecccCCCCC--CceEEEEcCCcHHHHHHhhh--------hcC
Confidence 4679999999996 577666643221 11 278 35999742 346777776 67766553 112
Q ss_pred chhhhcc-H----HHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC
Q psy7882 76 KLKISDT-V----RPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN 146 (329)
Q Consensus 76 g~T~agn-l----A~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~ 146 (329)
++++++. . ++++++.. +.+++ .+++.+..+++.+.|++. ....+. -...+.++.+.+.....
T Consensus 261 ~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~-~~~~~~~~~~~~~~~~~------ 331 (420)
T 3gbx_A 261 PSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR--GYKVVS-GGTENHLFLLDLVDKNL------ 331 (420)
T ss_dssp ----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT--TCEEGG-GSCSSSEEEEECGGGTC------
T ss_pred CCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc--CCeecc-CCCCCeEEEEEcCCCCC------
Confidence 2222222 1 22222221 12222 567778888888888762 111111 01245566677643110
Q ss_pred hHHHHHHHHHHHHCCceeecc------C--CCCCEEEEeCccccCc-CCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCKEHGLLLGRG------G--LSGNTLTALQPKLLNY-WTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~e~GVLl~~~------G--~~~nvIrl~PPL~It~-~t~eeId~~l~~~ 197 (329)
....+.+.|.++||++.+. + ..++.+||.||.+.+. .+++|++++++++
T Consensus 332 --~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l 389 (420)
T 3gbx_A 332 --TGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWM 389 (420)
T ss_dssp --CHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHH
Confidence 1345677788899999872 1 1245699999987542 3589999999975
No 111
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=98.57 E-value=4.3e-07 Score=86.59 Aligned_cols=166 Identities=9% Similarity=-0.022 Sum_probs=99.4
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch----------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF----------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD----------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~ 74 (329)
..||+++|.||++..+ ..+ ....++.|| ++|.+.+| +++|.+++++++.+.+.. ..
T Consensus 210 ~~~~~~li~De~~~~~-~~~----~~~~~~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~~~~--------~~ 275 (417)
T 3g7q_A 210 NQHNIPLVIDNAYGVP-FPG----IIFSEARPLWNPNIILCMSLSKLGLPG-SRCGIIIANDKTITAIAN--------MN 275 (417)
T ss_dssp HHTTCCEEEECTTCTT-TTC----CBCSCCCCCCCTTEEEEEESGGGTCTT-SCCEEEECCHHHHHHHHH--------HH
T ss_pred HHcCCEEEEeCCCccc-ccc----ccccccccCCCCCEEEEEechhccCCC-cceEEEEeCHHHHHHHHH--------hh
Confidence 4679999999998643 111 122233332 56977777 599999999999887764 23
Q ss_pred cchhhhcc-HHHHHH---HHh-hHHhH-----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCC
Q psy7882 75 HKLKISDT-VRPHVQ---IKK-SVLER-----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVP 144 (329)
Q Consensus 75 hg~T~agn-lA~aaa---la~-~ile~-----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p 144 (329)
+..+++.+ ++++++ ++. +..+. .++.++..+.+.+.|++.....+........|+++.+++....
T Consensus 276 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~----- 350 (417)
T 3g7q_A 276 GIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLP----- 350 (417)
T ss_dssp HHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTCS-----
T ss_pred cceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCCC-----
Confidence 44455555 444433 333 22211 2233444455555555533222222222345788888875311
Q ss_pred CChHHHHHHHHHHHHCCceeeccCC---C--------CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 145 LNSRHMTHILDSCKEHGLLLGRGGL---S--------GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 145 ~~~~~~~~~~~~l~e~GVLl~~~G~---~--------~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+ ...+...|.++||++.++.. . .+.+||.++. ++++|+++++++
T Consensus 351 ~~---~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~-----~~~~i~~~~~~l 406 (417)
T 3g7q_A 351 IT---TELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-----EPDKIEAGVKIL 406 (417)
T ss_dssp SC---HHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS-----CHHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC-----CHHHHHHHHHHH
Confidence 11 34577888999999987421 1 4689998863 479999999975
No 112
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=98.57 E-value=8.3e-07 Score=83.60 Aligned_cols=169 Identities=8% Similarity=-0.060 Sum_probs=98.8
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC---------
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL--------- 70 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~--------- 70 (329)
.+||+++|+||+++. |... +.... ..+| ++|.++ + ..+|++++++++++.+.+...+..
T Consensus 191 ~~~~~~li~D~~~~~-g~~~--~~~~~--~~~d~~~~s~~K~~g-~-~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (406)
T 1kmj_A 191 HQHGAKVLVDGAQAV-MHHP--VDVQA--LDCDFYVFSGHKLYG-P-TGIGILYVKEALLQEMPPWEGGGSMIATVSLSE 263 (406)
T ss_dssp HHTTCEEEEECTTTT-TTSC--CCHHH--HTCSEEEEEGGGTTS-C-TTCEEEEECHHHHHHCCCSSCSTTSEEEEETTT
T ss_pred HHcCCEEEEEchhhc-CCCC--Ccccc--cCCCEEEEEchhccC-C-CCcEEEEEeHHHHhhcCCcccCCCceeeccccc
Confidence 457999999999974 3331 12222 3477 469883 3 248999999998877643000000
Q ss_pred ----CCCccchhhhcc-HHHHHHH-Hh-hHHh-----H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe--eceeeEEEe
Q psy7882 71 ----KTPAHKLKISDT-VRPHVQI-KK-SVLE-----R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG--KGLMIGVDL 135 (329)
Q Consensus 71 ----~~~~hg~T~agn-lA~aaal-a~-~ile-----~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG--~GLm~gIef 135 (329)
.......+.+.+ +++++++ +. +.++ + .++.+++.+++.+.|++ .+.+.-+.. .|.++.+.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~ 339 (406)
T 1kmj_A 264 GTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLES----VPDLTLYGPQNRLGVIAFNL 339 (406)
T ss_dssp EEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT----STTEEEESCTTCCSEEEEEE
T ss_pred ccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCcCCEEEEEE
Confidence 000001112233 5555544 23 4443 2 44555666666666654 332322223 688888876
Q ss_pred ecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC----------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 136 VQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL----------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 136 ~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~----------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
. +. + ...+.+.|.++||++.+... ..+.+|+.++... +++|++++++++
T Consensus 340 ~-~~------~---~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~---t~~~i~~~~~~l 398 (406)
T 1kmj_A 340 G-KH------H---AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYN---THEEVDRLVTGL 398 (406)
T ss_dssp T-TC------C---HHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTC---CHHHHHHHHHHH
T ss_pred C-CC------C---HHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCC---CHHHHHHHHHHH
Confidence 3 11 1 23577888999999876321 1479999998776 589999999975
No 113
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=98.57 E-value=1.7e-07 Score=88.93 Aligned_cols=167 Identities=7% Similarity=-0.022 Sum_probs=101.8
Q ss_pred ccceEEehhHhhchhccchhhh--hcccCCcch---HHHhhc-CCccccceeeechhHHHh--hhhhhhccCCCCccchh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLG--FQCLQICRF---VQKDFK-GSFWDKLIVHTSTCTFEN--FIKIKYQILKTPAHKLK 78 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA--~e~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~--~~~~~~~~~~~~~hg~T 78 (329)
||+++|.||++++|.+.|.... .+.++.... ++|.++ .| +++|.+++++++.+. +...... ...+.++
T Consensus 210 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 285 (398)
T 3ele_A 210 RPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPG-ERIGYVLVPDEVYDKAELYAAVCG---AGRALGY 285 (398)
T ss_dssp SCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTT-TCCEEEECCTTSTTHHHHHHHHHH---HHHHTTC
T ss_pred CCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCcc-ceeEEEEEcchhhhHHHHHHHHHH---Hhhhccc
Confidence 7999999999999987774322 233333333 579998 88 499999999885432 1110000 0011224
Q ss_pred hhcc-HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 79 ISDT-VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 79 ~agn-lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
++.+ ++++++.+. +..+..+++++..+++.+.|+++ ... -+... |+++.+.+... ....+.+
T Consensus 286 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~L~~~--g~~---~~~~~~~~~~~~~~~~~----------~~~~~~~ 350 (398)
T 3ele_A 286 VCAPSLFQKMIVKCQGATGDINAYKENRDLLYEGLTRI--GYH---CFKPDGAFYMFVKALED----------DSNAFCE 350 (398)
T ss_dssp CCSCHHHHHHHTTCTTCCCCHHHHHHHHHHHHHHHHHH--TCC---EECCSBSSEEEEECSSS----------CHHHHHH
T ss_pred cCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCe---ecCCCeeEEEEEEcCCC----------CHHHHHH
Confidence 4455 444433322 11111567888888999888876 221 12222 45466666321 1345777
Q ss_pred HHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|.++||++.++.. .++.+|+... . ++++|+++++++
T Consensus 351 ~l~~~gi~v~~g~~~~~~~~iRis~~--~---~~e~i~~~l~~l 389 (398)
T 3ele_A 351 KAKEEDVLIVAADGFGCPGWVRISYC--V---DREMIKHSMPAF 389 (398)
T ss_dssp HHHTTTEECEESGGGTCTTEEEEECC--S---CHHHHHHHHHHH
T ss_pred HHHHCCEEEeCccccCCCCeEEEEec--C---CHHHHHHHHHHH
Confidence 88999999987432 2578999763 2 689999999975
No 114
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=98.56 E-value=1.7e-07 Score=89.29 Aligned_cols=170 Identities=6% Similarity=-0.051 Sum_probs=101.8
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhhhhhhc---cCC----
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFIKIKYQ---ILK---- 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~---~~~---- 71 (329)
..+|+++|+||+++ +|... +..+.+ .+| ..|.+++|. ++ |++++++++.+.+.+...+ ...
T Consensus 192 ~~~~~~li~D~a~~-~g~~~--~~~~~~--~~d~~~~s~~K~l~~g~-~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~ 265 (416)
T 1qz9_A 192 HECGALAIWDLAHS-AGAVP--VDLHQA--GADYAIGCTYKYLNGGP-GSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAM 265 (416)
T ss_dssp HHHTCEEEEECTTT-TTTSC--CCHHHH--TCSEEEECSSSTTCCCT-TCCCEEEECTTTTTTSCCSCCCGGGBCTTSCC
T ss_pred HHcCCEEEEEcccc-ccCcC--CChhhc--CCCEEEecCcccCCCCC-CCeEEEEECHHHHhccCCCccccCccccccCC
Confidence 35799999999997 55432 122223 377 249998885 77 9999999887655420000 000
Q ss_pred --CC-----ccchhh-hcc-HHHHHHHHh-hHH-----hH-HHHHHHHHHHHHHHHHHHHH--hCCceeeE--Eeeceee
Q psy7882 72 --TP-----AHKLKI-SDT-VRPHVQIKK-SVL-----ER-FVHTYVVGNFLLTHLSKLRE--EFAIVGDV--RGKGLMI 131 (329)
Q Consensus 72 --~~-----~hg~T~-agn-lA~aaala~-~il-----e~-le~v~~lG~~L~~gL~eL~~--~~p~v~~V--RG~GLm~ 131 (329)
.+ .+..++ +.+ .+++++.+. +.+ ++ .++.+++.++|.+.|+++.. ....+... ++.|.++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~ 345 (416)
T 1qz9_A 266 EPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHV 345 (416)
T ss_dssp CSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEE
T ss_pred CCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEE
Confidence 00 011111 234 344333333 333 22 67788888999998887632 22222111 1235667
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCc-cccCcCCHHHHHHHHhcc
Q psy7882 132 GVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQP-KLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 132 gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PP-L~It~~t~eeId~~l~~~ 197 (329)
.+.+.. ...+.+.|.++||++... ..+.+|+.++ +.+ +++|++++++++
T Consensus 346 ~~~~~~------------~~~l~~~l~~~gi~~~~~--~~~~lRis~~~~~~---t~~~i~~~~~~l 395 (416)
T 1qz9_A 346 SFEHPE------------GYAVIQALIDRGVIGDYR--EPRIMRFGFTPLYT---TFTEVWDAVQIL 395 (416)
T ss_dssp EEECTT------------HHHHHHHHHTTTEECEEE--TTTEEEEECCTTTC---CHHHHHHHHHHH
T ss_pred EEecCC------------HHHHHHHHHhCCcEeccC--CCCeEEEeCcccCC---CHHHHHHHHHHH
Confidence 776531 345788889999998653 3689999986 555 589999999985
No 115
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=98.53 E-value=3.5e-07 Score=90.99 Aligned_cols=175 Identities=11% Similarity=0.005 Sum_probs=107.0
Q ss_pred ccccceEEehhHhhch-----hccch---hhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhh------
Q psy7882 5 YYRDCGVVVSAVDFGS-----GDNGT---YLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKY------ 67 (329)
Q Consensus 5 ~~~giLLI~DEVqTGf-----GRTG~---~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~------ 67 (329)
.+||++||+||+++|| +++|. .+.....|+... ..|.+.+|+ ++|+++++++.+........
T Consensus 266 ~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~ 344 (514)
T 3mad_A 266 AEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAK-GTSVILYRRPDLLHYQYFIAADWPGG 344 (514)
T ss_dssp HHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCS-SCEEEEESSHHHHTTTCEEESSCTTC
T ss_pred HHhCCeEEEecccccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCC-CeEEEEEeCHHHhccccccccccCCC
Confidence 4679999999999987 45554 445556666443 459988885 89999998877654221000
Q ss_pred ccCCCCccchhhhcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC
Q psy7882 68 QILKTPAHKLKISDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK 142 (329)
Q Consensus 68 ~~~~~~~hg~T~agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~ 142 (329)
.......+++++..+ +++.++++. +-+++ .+++.++.++|.+.|+++ .....+... ..++.+... .
T Consensus 345 ~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~g~~~~~~~---~~~~~~~~~--~--- 415 (514)
T 3mad_A 345 LYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAI-PSLKILGDP---LWVIAVASD--E--- 415 (514)
T ss_dssp SEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-TTCEESSCC---SSEEEEECS--S---
T ss_pred cccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEEeCCC---eEEEEEeCC--C---
Confidence 000112355555555 666666654 22333 677888888888888764 111112121 224554431 1
Q ss_pred CCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 143 VPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 143 ~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+ ...+.+.|.++||++.... .++.+|+.+....+ ++++++++++++
T Consensus 416 --~~---~~~l~~~L~~~Gi~v~g~~-~~~~~Ri~~~~~~~--~~e~i~~~l~~L 462 (514)
T 3mad_A 416 --LN---IYQVMEEMAGRGWRLNGLH-RPPAFHVALTLRHT--EPGVVDRFLADL 462 (514)
T ss_dssp --SC---HHHHHHHHHTTTCBCEEET-TTTEEEEECCGGGG--STTHHHHHHHHH
T ss_pred --CC---HHHHHHHHHhcCCEeccCC-CCCeEEEEEecCCC--CHHHHHHHHHHH
Confidence 11 3468889999999884332 46789998763332 468999999975
No 116
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=98.52 E-value=7e-07 Score=85.56 Aligned_cols=163 Identities=6% Similarity=-0.024 Sum_probs=98.4
Q ss_pred cccceEEehhHhhchhccch---hhhhcccCCcch--------HHHhhc-CCccccceeee---chhHHHhhhhhhhccC
Q psy7882 6 YRDCGVVVSAVDFGSGDNGT---YLGFQCLQICRF--------VQKDFK-GSFWDKLIVHT---STCTFENFIKIKYQIL 70 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~---~fA~e~~GV~PD--------i~KaLg-GG~~PigAv~~---~~eI~d~~~~~~~~~~ 70 (329)
.||+++|.||++++|+++|. .+.....++.+| ++|.++ .| +++|.+++ ++++.+.+.....
T Consensus 217 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~--- 292 (418)
T 3rq1_A 217 RNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYG-QRVGAMIGISDDEEIADEFFEVNK--- 292 (418)
T ss_dssp SCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCS-SCCEEEEEEESSHHHHHHHHHHHH---
T ss_pred CCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcC-CcceEEEEEeCCHHHHHHHHHHHH---
Confidence 78999999999999998774 233344556666 469997 56 59999998 8999887753000
Q ss_pred CCCccchhh-hcc-HHHHHH---HHh-hH---H-h---H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEee
Q psy7882 71 KTPAHKLKI-SDT-VRPHVQ---IKK-SV---L-E---R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLV 136 (329)
Q Consensus 71 ~~~~hg~T~-agn-lA~aaa---la~-~i---l-e---~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~ 136 (329)
....+++ ..+ ++.+++ ++. +. + + + .++.++..+++.+.|+++ ..+.+. ..-|++..+.+.
T Consensus 293 --~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~~~~~~~ 366 (418)
T 3rq1_A 293 --STSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV--GLPMLP--YRGGFFITIPTD 366 (418)
T ss_dssp --HHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TCCCCC--CCSSSEEEEECT
T ss_pred --HHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCCC--CCceEEEEcCCC
Confidence 0111122 233 333332 322 21 1 1 1 345566666777777665 222221 122333333331
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 137 QDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
. ...+.+.|.++||++.+. ++.+||. +. ..++++|+++++++
T Consensus 367 ~------------~~~~~~~l~~~gi~v~~g---~~~iRis--~~--~~~~~~i~~~~~~l 408 (418)
T 3rq1_A 367 S------------ANAICEELKKEHIYVIAL---ANGIRIA--AC--GIPKCQMTGLAEKI 408 (418)
T ss_dssp T------------HHHHHHHHHHTTEECEEC---SSEEEEE--GG--GSCHHHHTTHHHHH
T ss_pred C------------HHHHHHHHHhCCEEEecC---CCCeEEE--Ee--cCCHHHHHHHHHHH
Confidence 0 235677888999999884 4679997 32 22689999999875
No 117
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=98.50 E-value=1.1e-06 Score=81.89 Aligned_cols=153 Identities=10% Similarity=0.086 Sum_probs=96.8
Q ss_pred cceEEehhHhhchhccchhhh-hcccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhhcc
Q psy7882 8 DCGVVVSAVDFGSGDNGTYLG-FQCLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISDT 82 (329)
Q Consensus 8 giLLI~DEVqTGfGRTG~~fA-~e~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~agn 82 (329)
| ++|.||++++|+.. .... .+.++.... ++|.++ .| +++|.+++++++++.+.. .. .+|+.+
T Consensus 168 ~-~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~--~~--------~~~~~~ 234 (335)
T 1uu1_A 168 A-FVALDEAYYEFHGE-SYVDFLKKYENLAVIRTFSKAFSLAA-QRVGYVVASEKFIDAYNR--VR--------LPFNVS 234 (335)
T ss_dssp C-EEEEECTTHHHHCC-CCGGGGGTCSSEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHH--HS--------CTTCSC
T ss_pred C-EEEEECcchhhcch-hHHHHhhhCCCEEEEecchhhcCCcc-cCeEEEEeCHHHHHHHHH--hc--------CCCCcC
Confidence 7 89999999988642 2222 122222222 579998 77 599999999999887763 11 123444
Q ss_pred -HHHHH---HHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882 83 -VRPHV---QIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS 156 (329)
Q Consensus 83 -lA~aa---ala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~ 156 (329)
+++++ +++. +.+++ .+++++..+++.+.|+++ .... ..+.|.++.+.+.. .-...+.+.
T Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~---~~~~~~~~~~~~~~----------~~~~~~~~~ 299 (335)
T 1uu1_A 235 YVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM--GYRI---TDSRGNFVFVFMEK----------EEKERLLEH 299 (335)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH--TCCB---CCCCSSEEEEECCT----------HHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC--CcEE---cCCCCeEEEEECCC----------CCHHHHHHH
Confidence 44433 3333 33444 566777777887777765 2221 23446666666531 113457888
Q ss_pred HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|.++||++.+. .+.+|+.+. +.+|++++++++
T Consensus 300 l~~~gi~v~~~---~~~iRis~~------~~~~i~~~~~~l 331 (335)
T 1uu1_A 300 LRTKNVAVRSF---REGVRITIG------KREENDMILREL 331 (335)
T ss_dssp HHHHTEEEEEE---TTEEEEECC------CHHHHHHHHHHH
T ss_pred HHHCCEEEEEC---CCeEEEEeC------CHHHHHHHHHHH
Confidence 88999999872 578999862 367899998874
No 118
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=98.50 E-value=4.1e-07 Score=89.04 Aligned_cols=176 Identities=14% Similarity=0.017 Sum_probs=96.2
Q ss_pred ccccceEEehhHh-hchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 5 YYRDCGVVVSAVD-FGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 5 ~~~giLLI~DEVq-TGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
..||++||+||++ +|+...|..... .. ..| ++|+++ | .+.|.+++++++.+.+..... ++.++++
T Consensus 210 ~~~g~lli~Dea~~~g~~~~g~~~~~--~~-~~di~~~s~sK~l~-G-~~gG~i~~~~~~~~~l~~~~~----~~~~~~~ 280 (447)
T 3h7f_A 210 DEVGAKLLVDMAHFAGLVAAGLHPSP--VP-HADVVSTTVHKTLG-G-GRSGLIVGKQQYAKAINSAVF----PGQQGGP 280 (447)
T ss_dssp HHHTCEEEEECTTTHHHHHTTSSCCS--TT-TCSEEEEESSGGGC-C-CSCEEEEECGGGHHHHHHHHT----TTTCSSC
T ss_pred HHcCCEEEEECCchhhhhcCCCCCCC--CC-CCcEEEecCCcCCC-C-CCeEEEEECHHHHHHHhhhcC----CcccCCc
Confidence 3579999999996 677665542211 10 125 469996 4 256778888888877653100 1223332
Q ss_pred hhcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE--eeceeeEEEeecCCCCCCCCChHHHH
Q psy7882 79 ISDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR--GKGLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 79 ~agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR--G~GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
.... .++++++.. +.+++ .+++.+..++|.+.|+++..+.+.+.-+. ..+.++.+++.... .+ ..
T Consensus 281 ~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~---~~ 352 (447)
T 3h7f_A 281 LMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSP-----LD---GQ 352 (447)
T ss_dssp CHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSS-----CC---HH
T ss_pred cHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCC-----CC---HH
Confidence 2222 333333332 12233 66788888888888876521111111111 12334555653211 01 23
Q ss_pred HHHHHHHHCCceee----cc----CCCCCEEEEeCccccCc-CCHHHHHHHHhcc
Q psy7882 152 HILDSCKEHGLLLG----RG----GLSGNTLTALQPKLLNY-WTDFVGTPCLDCE 197 (329)
Q Consensus 152 ~~~~~l~e~GVLl~----~~----G~~~nvIrl~PPL~It~-~t~eeId~~l~~~ 197 (329)
.+...+.++||++. +. ...++.+|+.+|.+.+. .+++|++++++++
T Consensus 353 ~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l 407 (447)
T 3h7f_A 353 AAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADII 407 (447)
T ss_dssp HHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHH
Confidence 35556667899987 22 11356799998886432 3689999999975
No 119
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=98.50 E-value=1.3e-06 Score=81.69 Aligned_cols=172 Identities=11% Similarity=0.022 Sum_probs=101.0
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhh-hhh----------hhc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENF-IKI----------KYQ 68 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~-~~~----------~~~ 68 (329)
.+||+++|+||+++.... ...... ..+| +.|.++|+. ++|++++++++++.+ .+. ...
T Consensus 154 ~~~~~~li~D~a~~~~~~---~~~~~~--~~~d~~~~s~~K~~~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (384)
T 3zrp_A 154 RKYVELIVVDGVSSVGAE---EVKAEE--WNVDVYLTASQKALGSAA-GLGLLLLSPKALSILDSQNSIAGYYLDLRNWL 227 (384)
T ss_dssp GGGEEEEEEECTTTTTTS---CCCTTT--TTCSEEEEETTSTTCCCS-SEEEEEECHHHHHHHHHCCCSCCSTTCHHHHH
T ss_pred HhcCCEEEEECcccccCc---cccccc--cCCCEEEecCcccccCCC-ceEEEEECHHHHHHhcCCCCCCcccccHHHHH
Confidence 468999999999873211 111122 2367 359998874 899999999998776 110 000
Q ss_pred -cCCCCc--cchhh-hcc----HHHHHHHHh--hH-HhH-HHHHHHHHHHHHHHHHHHHHhCCceee--EEeeceeeEEE
Q psy7882 69 -ILKTPA--HKLKI-SDT----VRPHVQIKK--SV-LER-FVHTYVVGNFLLTHLSKLREEFAIVGD--VRGKGLMIGVD 134 (329)
Q Consensus 69 -~~~~~~--hg~T~-agn----lA~aaala~--~i-le~-le~v~~lG~~L~~gL~eL~~~~p~v~~--VRG~GLm~gIe 134 (329)
....+. +...+ +.+ .++.++++. +. +++ .++.+++.+++.+.|+++ ....... ..+.|.++.+.
T Consensus 228 ~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~ 305 (384)
T 3zrp_A 228 PVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL--GLEIVARRPESYSNTVTGVI 305 (384)
T ss_dssp HHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCBSCSSGGGBCSSEEEEE
T ss_pred HHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC--CCeEccCcccccCccEEEEE
Confidence 000000 11111 122 222233332 11 233 667788888888888876 3332221 12346666777
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.. . ....+.+.|.++||++.+... ..+.+|+.++... +++|++++++++
T Consensus 306 ~~~-~---------~~~~~~~~l~~~gi~v~~g~~~~~~~iRi~~~~~~---~~e~i~~~~~~l 356 (384)
T 3zrp_A 306 LKV-A---------DPQKVLAGTVNEGVEFAPGVHPAFKYFRIGHMGWV---TPNDAIIAISVI 356 (384)
T ss_dssp CSS-S---------CHHHHHHHHHTTTCCCEECCCTTCCEEEEECCSSC---CHHHHHHHHHHH
T ss_pred CCC-C---------CHHHHHHHHHHCCEEEecCCCCCcCEEEEeccccC---CHHHHHHHHHHH
Confidence 642 1 134688889999999986421 1178999988765 589999999985
No 120
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=98.49 E-value=1.3e-06 Score=82.58 Aligned_cols=171 Identities=8% Similarity=-0.063 Sum_probs=104.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccc---
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK--- 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg--- 76 (329)
..+|+++|+||+++ +|... .......+| +.|.++++. ++|++++++++++.+...... ...+.++
T Consensus 186 ~~~~~~li~Dea~~-~g~~~----~~~~~~~~di~~~s~sK~l~~~~-~~G~l~~~~~~~~~~~~~~~~-~~~~~~~~~~ 258 (393)
T 1vjo_A 186 REFGTLLLVDTVTS-LGGVP----IFLDAWGVDLAYSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTK-VANWYLDMNL 258 (393)
T ss_dssp HHHTCEEEEECTTT-TTTSC----CCTTTTTCSEEECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSC-CSCSTTCHHH
T ss_pred HHcCCEEEEECCcc-ccCcC----CcccccCccEEEEcCcccccCCC-ceEEEEECHHHHHHHhccCCC-CCceecCcHh
Confidence 35699999999999 66532 222234578 349999986 899999999988876420000 0011111
Q ss_pred ---------hhh-hcc-HHHHHHHHh-hHH-----hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe--eceeeEEEee
Q psy7882 77 ---------LKI-SDT-VRPHVQIKK-SVL-----ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG--KGLMIGVDLV 136 (329)
Q Consensus 77 ---------~T~-agn-lA~aaala~-~il-----e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG--~GLm~gIef~ 136 (329)
.++ +.+ .+++++.+. +.+ ++ .++.+++.+++.+.|+++ ....... .| .+.+..+.+.
T Consensus 259 ~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~-~~~~~~~~~~~~~~ 335 (393)
T 1vjo_A 259 LGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI--GLSLHVE-KEYRLPTLTTVCIP 335 (393)
T ss_dssp HHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCBSSC-GGGBCSSEEEEECC
T ss_pred hhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc--CCcccCC-ccccCCcEEEEEcC
Confidence 122 344 444444433 332 22 567788888888888775 3333221 22 2345666653
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHC-CceeeccCC--CCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882 137 QDKETKVPLNSRHMTHILDSCKEH-GLLLGRGGL--SGNTLTALQ-PKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 137 ~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G~--~~nvIrl~P-PL~It~~t~eeId~~l~~~ 197 (329)
.+. + ...+.+.|.++ ||++.+... ..+.+|+.| ++.. ++++++++++++
T Consensus 336 ~~~------~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~---~~~~i~~~~~~l 388 (393)
T 1vjo_A 336 DGV------D---GKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNS---RKESVDQLIPAL 388 (393)
T ss_dssp TTC------C---HHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGC---SHHHHHHHHHHH
T ss_pred CCC------C---HHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCC---hHHHHHHHHHHH
Confidence 110 1 34588888887 999987421 357999995 5665 467899999875
No 121
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=98.49 E-value=5.3e-07 Score=83.16 Aligned_cols=171 Identities=10% Similarity=-0.017 Sum_probs=99.1
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhh-hhh--------ccC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIK-IKY--------QIL 70 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~-~~~--------~~~ 70 (329)
..+|+++|+||++ ++|+.. +....++ +| ..|.++|+. ++|++++++++++.+.. ... ...
T Consensus 151 ~~~~~~li~D~a~-~~~~~~--~~~~~~~--~d~~~~s~~K~~~~~~-g~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (353)
T 2yrr_A 151 KEAGALFFLDAVT-TLGMLP--FSMRAMG--VDYAFTGSQKCLSAPP-GLAPIAASLEARKAFTGKRGWYLDLARVAEHW 224 (353)
T ss_dssp HHHTCEEEEECTT-TTTTSC--CCHHHHT--CSEEECCTTSTTCCCS-SCEEEEECHHHHHHCCCCSCSTTCHHHHHHHH
T ss_pred HHcCCeEEEEcCc-cccccc--ccccccC--ceEEEecCcccccCCC-ceEEEEECHHHHHHhccCCCccccHHHHhhhh
Confidence 3579999999999 576552 2223333 57 359998764 68999999998865530 000 000
Q ss_pred CCCccchhhhcc-HHHH---HHHHh--hH-HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC
Q psy7882 71 KTPAHKLKISDT-VRPH---VQIKK--SV-LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK 142 (329)
Q Consensus 71 ~~~~hg~T~agn-lA~a---aala~--~i-le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~ 142 (329)
......+ +.+ .+++ ++++. +. +++ .++.+++.+++.+.|+++ ...........+.++.+.+...
T Consensus 225 ~~~~~~~--~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~---- 296 (353)
T 2yrr_A 225 ERGGYHH--TTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR--GFRPYPKASPLPTVLVVRPPEG---- 296 (353)
T ss_dssp TTCCCSS--CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCEESCSSSBCTTEEEEECCTT----
T ss_pred hcCCCCC--CCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC--CCccccCccCCCeEEEEECCCC----
Confidence 0011111 223 2222 33322 11 333 567788888888888774 2222221112466667776321
Q ss_pred CCCChHHHHHHHHHHHHCCceeeccC--CCCCEEEEeCccccCcCCHHHHH-HHHhcc
Q psy7882 143 VPLNSRHMTHILDSCKEHGLLLGRGG--LSGNTLTALQPKLLNYWTDFVGT-PCLDCE 197 (329)
Q Consensus 143 ~p~~~~~~~~~~~~l~e~GVLl~~~G--~~~nvIrl~PPL~It~~t~eeId-~~l~~~ 197 (329)
.+ ...+.+.|.++||++.+.. ..++.+|+.++... +++|++ ++++++
T Consensus 297 --~~---~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~---~~~~~~~~~~~~l 346 (353)
T 2yrr_A 297 --VD---ADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGEG---ARREAYQAFLKAL 346 (353)
T ss_dssp --CC---HHHHHHHHHHTTEECEECCGGGTTTCEEEECSGGG---SCHHHHHHHHHHH
T ss_pred --CC---HHHHHHHHHHCCEEEeCCccccCCCeEEEecCccC---CHHHHHHHHHHHH
Confidence 01 3468888999999998642 13578999986555 357888 888875
No 122
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=98.49 E-value=1.1e-06 Score=84.77 Aligned_cols=170 Identities=16% Similarity=0.035 Sum_probs=99.5
Q ss_pred ccccceEEehhHhhch--hccc----hhhhh----cccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCC
Q psy7882 5 YYRDCGVVVSAVDFGS--GDNG----TYLGF----QCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILK 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGf--GRTG----~~fA~----e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~ 71 (329)
..||+++|.||++.++ +..+ .++.. +..+...+ ++|.++.| +.+|.+++++++.+.+..
T Consensus 212 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G-~r~G~~~~~~~l~~~~~~------- 283 (427)
T 3ppl_A 212 AAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAG-AGVSFFLTSAENRKWYTG------- 283 (427)
T ss_dssp SSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTT-SSCEEEECCHHHHHHHHH-------
T ss_pred hcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcC-ccEEEEEcCHHHHHHHHH-------
Confidence 5789999999999984 3333 12222 13344444 57997778 499999999999887764
Q ss_pred CCccchhhhcc-HHH---HHHHHh-hHHhH-----HHHHHHHHHHHHHHHHHHHHhCCcee-eEEeeceeeEEEeecCCC
Q psy7882 72 TPAHKLKISDT-VRP---HVQIKK-SVLER-----FVHTYVVGNFLLTHLSKLREEFAIVG-DVRGKGLMIGVDLVQDKE 140 (329)
Q Consensus 72 ~~~hg~T~agn-lA~---aaala~-~ile~-----le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~GLm~gIef~~d~~ 140 (329)
..+..+++.+ +++ +++++. +.+++ .+..++.-+.+.+.|++.....+.+. ..-.-|+++.+++...
T Consensus 284 -~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~-- 360 (427)
T 3ppl_A 284 -HAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPG-- 360 (427)
T ss_dssp -HHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTT--
T ss_pred -HhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcc--
Confidence 1222333444 333 233333 22222 22333333444444444322222111 1112377888887431
Q ss_pred CCCCCChHHHHHHHHHHHHCCceeeccC--------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 141 TKVPLNSRHMTHILDSCKEHGLLLGRGG--------LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 141 ~~~p~~~~~~~~~~~~l~e~GVLl~~~G--------~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
....+...|.++||++.++| ...+.+||.++.. ++++|+++++++
T Consensus 361 --------~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~----~~~~i~~~~~~l 413 (427)
T 3ppl_A 361 --------TASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP----PVEELEVAMDGV 413 (427)
T ss_dssp --------CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS----CHHHHHHHHHHH
T ss_pred --------hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC----CHHHHHHHHHHH
Confidence 13457788899999998832 1357899988543 478999999875
No 123
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=98.49 E-value=1.5e-06 Score=83.40 Aligned_cols=163 Identities=13% Similarity=-0.059 Sum_probs=94.5
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCcccc-ceeeechhHHH-hhhhhhhccCCCCccc-hh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDK-LIVHTSTCTFE-NFIKIKYQILKTPAHK-LK 78 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~Pi-gAv~~~~eI~d-~~~~~~~~~~~~~~hg-~T 78 (329)
..+|+++|+||+++.+. .+.. ..+++... +.|.++|+..++ |++++++++++ .+.. ..++ .+
T Consensus 177 ~~~~~~li~D~~~~~~~-~~~~---~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~--------~~~~~~~ 244 (398)
T 1gc0_A 177 RKHGATVVVDNTYCTPY-LQRP---LELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQ--------GLKDMTG 244 (398)
T ss_dssp GGGTCEEEEECTTTHHH-HCCG---GGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHT--------HHHHHTC
T ss_pred HHcCCEEEEECCCcccc-cCCc---hhhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHH--------HhhccCC
Confidence 46799999999998552 2322 12444333 569999765687 88888887665 3332 1222 22
Q ss_pred hhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceee------------------EEeeceeeEEEeec
Q psy7882 79 ISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGD------------------VRGKGLMIGVDLVQ 137 (329)
Q Consensus 79 ~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~------------------VRG~GLm~gIef~~ 137 (329)
.+.+ ++++++++. +.+.. +++..+..+.+.+.|++ ++.+.. .+|.|.|+.+++..
T Consensus 245 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~----~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (398)
T 1gc0_A 245 AVLSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLAR----QPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG 320 (398)
T ss_dssp CCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHT----CTTEEEEEEC----------------CCTTEEEEEETT
T ss_pred CCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhc----CCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC
Confidence 3345 555555544 43322 44444555555555443 232222 24678899998842
Q ss_pred CCCCCCCCChHHHHHHHHHHHHCCceeecc--C--------------------------CCCCEEEEeCccccCcCCHHH
Q psy7882 138 DKETKVPLNSRHMTHILDSCKEHGLLLGRG--G--------------------------LSGNTLTALQPKLLNYWTDFV 189 (329)
Q Consensus 138 d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~--G--------------------------~~~nvIrl~PPL~It~~t~ee 189 (329)
+ ...+...+.+.|++.... | ...+.||+.+++. +++++
T Consensus 321 ~-----------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~---~~~~~ 386 (398)
T 1gc0_A 321 G-----------IGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLE---DIDDL 386 (398)
T ss_dssp H-----------HHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSS---CHHHH
T ss_pred C-----------HHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcC---CHHHH
Confidence 1 123445556677765431 1 1147999999874 36899
Q ss_pred HHHHHhcc
Q psy7882 190 GTPCLDCE 197 (329)
Q Consensus 190 Id~~l~~~ 197 (329)
|+.+++++
T Consensus 387 i~~l~~al 394 (398)
T 1gc0_A 387 LADVQQAL 394 (398)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988875
No 124
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=98.49 E-value=8.8e-07 Score=85.53 Aligned_cols=170 Identities=5% Similarity=-0.051 Sum_probs=97.6
Q ss_pred ccccceEEehhHhhchhccchhhh-h--cccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLG-F--QCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA-~--e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
..||+++|.||++..+ ..+..+. . ...+...+ ++|.+.+| +++|.+++++++.+.+.. ..+..+
T Consensus 236 ~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G-~r~G~~~~~~~l~~~~~~--------~~~~~~ 305 (444)
T 3if2_A 236 KRYDIPLIIDNAYGMP-FPNIIYSDAHLNWDNNTILCFSLSKIGLPG-MRTGIIVADAKVIEAVSA--------MNAVVN 305 (444)
T ss_dssp HHTTCCEEEECTTCTT-TTCCBCSCCCCCCCTTEEEEEESTTTTCGG-GCCEEEECCHHHHHHHHH--------HHHHHH
T ss_pred HHCCCEEEEECCCCCc-ccccccccccccCCCCEEEEechhhccCCC-CceEEEEECHHHHHHHHH--------HHHhcc
Confidence 4689999999999633 1111100 0 01122222 56987677 499999999999887764 234455
Q ss_pred hhcc-HHHHHHH---Hh-hHHhH-----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882 79 ISDT-VRPHVQI---KK-SVLER-----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 79 ~agn-lA~aaal---a~-~ile~-----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~ 148 (329)
++.+ ++++++. +. +..+. .++.++.-+.+.+.|++.....+........|+++.+++.... .+
T Consensus 306 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~-----~~-- 378 (444)
T 3if2_A 306 LAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLP-----IS-- 378 (444)
T ss_dssp SSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCS-----SC--
T ss_pred CCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCC-----CC--
Confidence 5555 5444433 33 22211 1223334444444444432222211112255788888885311 11
Q ss_pred HHHHHHHHHHHCCceeeccCCC------------CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCKEHGLLLGRGGLS------------GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~e~GVLl~~~G~~------------~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+...|.++||++.+.... .+.+||.++. ++++|+++++++
T Consensus 379 -~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-----~~e~i~~~l~~l 433 (444)
T 3if2_A 379 -TLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-----DEQTLIDGIKVI 433 (444)
T ss_dssp -HHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-----CHHHHHHHHHHH
T ss_pred -HHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC-----CHHHHHHHHHHH
Confidence 345778889999999874321 1589999885 479999999975
No 125
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=98.48 E-value=1.7e-06 Score=82.78 Aligned_cols=150 Identities=8% Similarity=-0.004 Sum_probs=88.1
Q ss_pred cccceEEehhHhhchhccch---hhhhcccCCcch--------HHHhhc-CCccccceeee---chhHHHhhhhhhhccC
Q psy7882 6 YRDCGVVVSAVDFGSGDNGT---YLGFQCLQICRF--------VQKDFK-GSFWDKLIVHT---STCTFENFIKIKYQIL 70 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~---~fA~e~~GV~PD--------i~KaLg-GG~~PigAv~~---~~eI~d~~~~~~~~~~ 70 (329)
.||+++|.||++.+|+++|. .+.....++.+| ++|.++ .| +++|.+++ ++++++.+.....
T Consensus 216 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~--- 291 (413)
T 3t18_A 216 DKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYG-LRSGAAVGISSSKEIIEEFEASLA--- 291 (413)
T ss_dssp TCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGG-GCCEEEEEEESCHHHHHHHHHHHH---
T ss_pred CCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcC-cCcEEEEEecCCHHHHHHHHHHHH---
Confidence 68999999999999998874 223333455555 569999 77 59999998 8999887764100
Q ss_pred CCCccchh-hhcc-HHHHHHHHh----h---HHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEee
Q psy7882 71 KTPAHKLK-ISDT-VRPHVQIKK----S---VLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLV 136 (329)
Q Consensus 71 ~~~~hg~T-~agn-lA~aaala~----~---ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~ 136 (329)
....++ +..+ ++++++.+. + ..+. .++.++..+++.+.|+++ +. .-+... |++..+.+.
T Consensus 292 --~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~-~~~~~~~~~~~~~~~~ 364 (413)
T 3t18_A 292 --HSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKEN----KL-TMIPYFGGFFTFIPTD 364 (413)
T ss_dssp --HHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TC-CCBCCCSSSCEEEECS
T ss_pred --HhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----CC-CccCCCceEEEEeCCC
Confidence 011112 2244 444443332 2 1111 233445555555555543 21 112223 333333331
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccc
Q psy7882 137 QDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKL 181 (329)
Q Consensus 137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~ 181 (329)
. ...+.+.|.++||++.+. ++.+|+.++..
T Consensus 365 ~------------~~~~~~~l~~~gv~v~~g---~~~iRis~~~~ 394 (413)
T 3t18_A 365 K------------AFDIVKDLEKENIFTIPS---AKGIRVAICGV 394 (413)
T ss_dssp C------------HHHHHHHHHHTTEECEEC---SSEEEECTTTS
T ss_pred C------------HHHHHHHHHhCCEEEecC---CCceEEEEeeC
Confidence 0 234677888999999884 57899998743
No 126
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=98.48 E-value=9.5e-07 Score=82.47 Aligned_cols=159 Identities=5% Similarity=-0.081 Sum_probs=98.2
Q ss_pred cceEEehhHhhchhccchhhh--hcccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882 8 DCGVVVSAVDFGSGDNGTYLG--FQCLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD 81 (329)
Q Consensus 8 giLLI~DEVqTGfGRTG~~fA--~e~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag 81 (329)
+.++|.||++.+|+..|.... .+.++.... ++|.++ .| +.+|.+++++++.+.+.. .. .+++.
T Consensus 160 ~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~~~--------~~--~~~~~ 228 (350)
T 3fkd_A 160 DTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPG-LRIGYIVANKDFMKRVAA--------FS--TPWAV 228 (350)
T ss_dssp TSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGG-GCCEEEECCHHHHHHHHT--------TC--CTTCS
T ss_pred CCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcc-hheEeEEeCHHHHHHHHH--------hC--CCCCC
Confidence 359999999999987765322 111221122 579998 67 499999999999887763 11 23444
Q ss_pred c-HHHHHH---HHh-h-HHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882 82 T-VRPHVQ---IKK-S-VLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD 155 (329)
Q Consensus 82 n-lA~aaa---la~-~-ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~ 155 (329)
+ ++++++ ++. + ..+++.+..+..+++.+.|+ ++|.+.-..+.|.++.+.+... -...+.+
T Consensus 229 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~~~~~~~~~~~~~~~----------~~~~l~~ 294 (350)
T 3fkd_A 229 NALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALN----RLDGVEVHPSGTTFFLLRLKKG----------TAAELKK 294 (350)
T ss_dssp CHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHH----HSTTEEECCCSSSEEEEEESSS----------CHHHHHH
T ss_pred CHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHh----cCCCcEECCCCCcEEEEECCCC----------CHHHHHH
Confidence 4 444333 333 2 33333333344555555554 3454444556677777777431 1346888
Q ss_pred HHHH-CCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 156 SCKE-HGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 156 ~l~e-~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.|.+ +||++.++.. ..+.+|+... +.+|++++++++
T Consensus 295 ~L~~~~gi~v~~g~~f~~~~~~~iRis~~------~~~~~~~l~~al 335 (350)
T 3fkd_A 295 YMLEEYNMLIRDASNFRGLDESYVRITTQ------RPAQNQLFIKAL 335 (350)
T ss_dssp HHHHTTCEECEECTTSTTCCTTEEEEECC------CHHHHHHHHHHH
T ss_pred HHHHHCCEEEEeCccCCCCCCCEEEEEcC------CHHHHHHHHHHH
Confidence 8888 9999987531 2678999753 467888888774
No 127
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=98.48 E-value=8.6e-07 Score=84.73 Aligned_cols=174 Identities=9% Similarity=-0.011 Sum_probs=99.8
Q ss_pred ccccceEEehhHhhchhccch-----hhhhcccCCcch------HHHhhc-CCccccceeeechh--HHHhhhhhhhccC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT-----YLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTC--TFENFIKIKYQIL 70 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~-----~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~e--I~d~~~~~~~~~~ 70 (329)
..||+++|+||+++++.++|. +.....++..++ ++|.++ .| +++|.++++++ +++.+... ..
T Consensus 207 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-lr~G~~~~~~~~~~~~~~~~~-~~-- 282 (416)
T 1bw0_A 207 EELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPG-WRLGWLLYVDPHGNGPSFLEG-LK-- 282 (416)
T ss_dssp HHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGG-GCCEEEEEECTTCSCHHHHHH-HH--
T ss_pred HHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCC-ceEEEEEeeCchhhHHHHHHH-HH--
Confidence 357999999999999877664 223332332222 469975 55 58999998774 55544320 00
Q ss_pred CCCccchhhhcc-HHHHHHHHh-h-----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCC
Q psy7882 71 KTPAHKLKISDT-VRPHVQIKK-S-----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKET 141 (329)
Q Consensus 71 ~~~~hg~T~agn-lA~aaala~-~-----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~ 141 (329)
..+..+++.+ ++++++.+. + .+++ .+++++..+++.+.|+ ++|.+..++. .|.++.+.+......
T Consensus 283 --~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~g~~~~~~~~~~~~~~~~~~~~~~ 356 (416)
T 1bw0_A 283 --RVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIG----ECIGLAPTMPRGAMYLMSRIDLEKYR 356 (416)
T ss_dssp --HHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHT----TSTTEEECCCCBTTEEEEEECGGGBS
T ss_pred --HHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH----hCCCCcccCCCeeEEEEEeCCHHHcC
Confidence 0123456666 555544433 2 2222 4455555555555554 3443433333 366777777421000
Q ss_pred CCCCChHHHHHHHHHHH-HCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCK-EHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~-e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.. .-...+...|+ ++||++.++.. .++.+|+.+. . ++++|++.++.+
T Consensus 357 -~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~--~---~~e~l~~~l~~l 406 (416)
T 1bw0_A 357 -DI---KTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTT--R---PVEVYREAVERI 406 (416)
T ss_dssp -SC---CSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC--S---CHHHHHHHHHHH
T ss_pred -CC---CCHHHHHHHHHHHCCEEEecccccCCCCeEEEEec--C---CHHHHHHHHHHH
Confidence 00 01345777774 89999987431 2478999883 2 578999999875
No 128
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=98.47 E-value=9.8e-08 Score=89.26 Aligned_cols=166 Identities=11% Similarity=-0.011 Sum_probs=103.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHh-hhhhhhccCCCCccch-
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFEN-FIKIKYQILKTPAHKL- 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~-~~~~~~~~~~~~~hg~- 77 (329)
..||+++|.||+++++ ..+ +....++ +| ++|.+++|. ++|++++++++++. +.. .. ....+..
T Consensus 174 ~~~~~~li~D~a~~~~-~~~--~~~~~~~--~di~~~s~sK~~~~~~-~~G~~~~~~~~~~~~~~~--~~--~~~~~~~~ 243 (371)
T 2e7j_A 174 SEYDVPLLVNGAYAIG-RMP--VSLKEIG--ADFIVGSGHKSMAASG-PIGVMGMKEEWAEIVLRR--SE--KYKNKEVE 243 (371)
T ss_dssp HTTTCCEEEECTTTBT-TBC--CCHHHHT--CSEEEEEHHHHSSCCS-SCEEEEECTTTTTTTTCB--CS--SCTTSBGG
T ss_pred HHcCCeEEEECccccC-CCC--CChhhcC--CCEEEecCCcCCCCCC-CcEEEEEechhhhhhccc--cc--cCcccccc
Confidence 3579999999999864 332 1223333 67 579999986 99999999988766 542 00 0011100
Q ss_pred --hhhcc-HHHHHHHHh-hHHh-H-HHHH--HHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 78 --KISDT-VRPHVQIKK-SVLE-R-FVHT--YVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 78 --T~agn-lA~aaala~-~ile-~-le~v--~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
+++.+ .+++++.+. +.++ + .+++ +++.+++.+.|+++ ....+...++.|.++.+++. +
T Consensus 244 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~-~----------- 309 (371)
T 2e7j_A 244 LLGCTARGATIITLMASFPHVRERIKRWDEEVEKARRFAAEMEKL--GIKQLGDNPHNHDLMFFHAE-V----------- 309 (371)
T ss_dssp GTTCCCCSHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHT--TCEEESSSSCCSSEEEEECH-H-----------
T ss_pred cccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CcEEecCCCccCceEEEECC-C-----------
Confidence 33445 555444444 4443 2 5677 88888888888775 22222222224667777763 1
Q ss_pred HHHHHHHHHHCCceeecc-------CCCCCEEE-EeCccc-cCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRG-------GLSGNTLT-ALQPKL-LNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~-------G~~~nvIr-l~PPL~-It~~t~eeId~~l~~~ 197 (329)
...+.+.|.++||++.+. |...+.+| +.++.. . +++|++++++++
T Consensus 310 ~~~~~~~l~~~gi~~~~~~~~~~~~g~~~~~iRii~~~~~~~---~~~~i~~~~~~l 363 (371)
T 2e7j_A 310 LYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLSTYGL---SDEEVDYVLNAF 363 (371)
T ss_dssp HHHHHHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEEECTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEEeccccccccCCCCCceEEEEeeccCC---CHHHHHHHHHHH
Confidence 245777788899988761 21256788 877754 4 589999999975
No 129
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=98.47 E-value=2.3e-06 Score=80.09 Aligned_cols=173 Identities=13% Similarity=-0.025 Sum_probs=104.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC--------C
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL--------K 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~--------~ 71 (329)
..||+++|+||+++.+ ... +....+ .+| +.|.++++. ++|++++++++++.+.+...... .
T Consensus 173 ~~~~~~li~D~a~~~~-~~~--~~~~~~--~~di~~~s~sK~~~~~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (386)
T 2dr1_A 173 KEHDKLVFVDAVSAMG-GAD--IKFDKW--GLDVVFSSSQKAFGVPP-GLAIGAFSERFLEIAEKMPERGWYFDIPLYVK 246 (386)
T ss_dssp HHTTCEEEEECTTTBT-TBC--CCTTTT--TCSEEEEETTSTTCCCS-SCEEEEECHHHHHHHTTCTTCCSTTCHHHHHH
T ss_pred HHcCCeEEEEcccccc-Ccc--cccccc--CCcEEEEeccccccCCC-ceEEEEECHHHHHHHhcCCCCceEEeHHHHHH
Confidence 3579999999998743 221 222222 357 459999874 68999999998876531000000 0
Q ss_pred CC--ccchhhhcc-HHHHHHHHh-hH------HhH-HHHHHHHHHHHHHHHHHHHHhCCceee-EEeeceeeEEEeecCC
Q psy7882 72 TP--AHKLKISDT-VRPHVQIKK-SV------LER-FVHTYVVGNFLLTHLSKLREEFAIVGD-VRGKGLMIGVDLVQDK 139 (329)
Q Consensus 72 ~~--~hg~T~agn-lA~aaala~-~i------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~-VRG~GLm~gIef~~d~ 139 (329)
.. ....+++.+ .+++++.+. +. +++ .++.+++.+++.+.|+++ ....... -...|.++.+.+....
T Consensus 247 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~ 324 (386)
T 2dr1_A 247 YLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI--GLDILAEPGHESPTITAVLTPPGI 324 (386)
T ss_dssp HHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT--TCCBSSCTTCBCSSEEEEECCTTC
T ss_pred hhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc--CCeeCcCccccCCceEEEEcCCCC
Confidence 00 011233444 444333333 22 333 677888888888888875 2332211 0115778888874211
Q ss_pred CCCCCCChHHHHHHHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 140 ETKVPLNSRHMTHILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 140 ~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
....+.+.|.++||++.+... ..+.+|+.++... +++|++++++++
T Consensus 325 ---------~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l 372 (386)
T 2dr1_A 325 ---------KGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHMGYM---KFEDIQEMLDNL 372 (386)
T ss_dssp ---------CHHHHHHHHHHTTEECEECCGGGTTTEEEEECCSSC---CHHHHHHHHHHH
T ss_pred ---------CHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence 134688889999999987421 2579999988755 589999999975
No 130
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=98.45 E-value=1.4e-06 Score=80.74 Aligned_cols=163 Identities=12% Similarity=-0.003 Sum_probs=93.0
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccc-cceeeech-hHHHhhhhhhhccCCCCccc-hhhh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWD-KLIVHTST-CTFENFIKIKYQILKTPAHK-LKIS 80 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~P-igAv~~~~-eI~d~~~~~~~~~~~~~~hg-~T~a 80 (329)
+|+++|+||+++.+ .... .. .++.... ++|.++++..+ .|++++++ ++.+.+.. ..++ .+.+
T Consensus 113 ~~~~li~D~a~~~~-~~~~--~~-~~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~--------~~~~~~~~~ 180 (331)
T 1pff_A 113 KDILVIVDNTFASP-ILTN--PL-DLGVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQ--------GIKDITGAI 180 (331)
T ss_dssp SSCEEEEECTTTHH-HHCC--GG-GGTCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHT--------CCCCCCCCC
T ss_pred cCCEEEEECCCccc-ccCC--hh-hcCCcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHH--------HHHhhcCCC
Confidence 89999999999743 2211 11 2342222 56999875457 68888998 88877653 2233 3344
Q ss_pred cc-HHHHHHHHh-hHHh----H-HHHHHHHHHHHHHHHHHHH-------HhCCce----eeEEeeceeeEEEeecCCCCC
Q psy7882 81 DT-VRPHVQIKK-SVLE----R-FVHTYVVGNFLLTHLSKLR-------EEFAIV----GDVRGKGLMIGVDLVQDKETK 142 (329)
Q Consensus 81 gn-lA~aaala~-~ile----~-le~v~~lG~~L~~gL~eL~-------~~~p~v----~~VRG~GLm~gIef~~d~~~~ 142 (329)
.+ +++.++++. +.+. . .+++..+.+++.+. .++. .++|.+ ...+|.|.|+++++. +
T Consensus 181 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~-~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~---- 254 (331)
T 1pff_A 181 ISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEH-KAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD-G---- 254 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS-S----
T ss_pred CCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHcC-CCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-C----
Confidence 55 455443333 2221 1 23344444443321 0000 111110 122567889988874 1
Q ss_pred CCCChHHHHHHHHHHHHCCceeecc----------------------------CCCCCEEEEeCccccCcCCHHHHHHHH
Q psy7882 143 VPLNSRHMTHILDSCKEHGLLLGRG----------------------------GLSGNTLTALQPKLLNYWTDFVGTPCL 194 (329)
Q Consensus 143 ~p~~~~~~~~~~~~l~e~GVLl~~~----------------------------G~~~nvIrl~PPL~It~~t~eeId~~l 194 (329)
...+.+.+.++||+++.. |...+.+|+.+++.. ++++|+.++
T Consensus 255 -------~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~---t~~~i~~l~ 324 (331)
T 1pff_A 255 -------LEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCEN---VQDIIDDLK 324 (331)
T ss_dssp -------HHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSC---HHHHHHHHH
T ss_pred -------HHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCC---HHHHHHHHH
Confidence 124667778899977532 112479999999754 689999999
Q ss_pred hcc
Q psy7882 195 DCE 197 (329)
Q Consensus 195 ~~~ 197 (329)
+++
T Consensus 325 ~~l 327 (331)
T 1pff_A 325 QAL 327 (331)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 131
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=98.45 E-value=1.3e-06 Score=83.19 Aligned_cols=170 Identities=11% Similarity=-0.031 Sum_probs=97.2
Q ss_pred ccccceEEehhH-hhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeec-hhHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAV-DFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTS-TCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEV-qTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
.+||+++|+||+ .+|+.+.|..+.... .+| ++|+++|+ ..|.++++ +++.+.+.. . ..++.
T Consensus 197 ~~~~~~li~De~~~~g~~~~~~~~~~~~---~~di~~~s~sK~l~g~--~~g~~~~~~~~~~~~~~~--~-----~~~~~ 264 (425)
T 3ecd_A 197 DSVGAKLMVDMAHIAGVIAAGRHANPVE---HAHVVTSTTHKTLRGP--RGGFVLTNDEEIAKKINS--A-----VFPGL 264 (425)
T ss_dssp HHHTCEEEEECGGGHHHHHTTSSCCGGG---TCSEEEEESSGGGCCC--SCEEEEESCHHHHHHHHH--H-----HC---
T ss_pred HHcCCEEEEECcChHhhhhcccccCchh---cCcEEEecCCcccCCC--CcEEEEeCCHHHHHHHHh--h-----hCccc
Confidence 457999999999 467766654322111 156 45999553 46777777 466665543 1 11111
Q ss_pred hhhcc--HHH--HHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 78 KISDT--VRP--HVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 78 T~agn--lA~--aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
+.+.+ ..+ ++++.. +.+++ .+++.++.++|.+.|+++ ....+. -.+.+.++.+.+..... .
T Consensus 265 ~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~-~~~~~~~~~~~~~~~~~--------~ 333 (425)
T 3ecd_A 265 QGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG--GVDLVT-GGTDNHLLLVDLRPKGL--------K 333 (425)
T ss_dssp --CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT--TCEEGG-GSCSSSEEEEECGGGTC--------C
T ss_pred cCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC--CCeecc-CCCCceEEEEEeCCCCC--------C
Confidence 11111 222 222211 12222 567888888888888763 111111 11356677777753110 1
Q ss_pred HHHHHHHHHHCCceeeccC--------CCCCEEEEeCccccC-cCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGG--------LSGNTLTALQPKLLN-YWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G--------~~~nvIrl~PPL~It-~~t~eeId~~l~~~ 197 (329)
...+.+.|.++||++.+.. ...+.+|+.||...+ .++++|++++++++
T Consensus 334 ~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l 390 (425)
T 3ecd_A 334 GAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLI 390 (425)
T ss_dssp HHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHH
Confidence 3456777888999998321 123589999887653 44589999999985
No 132
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=98.45 E-value=1.3e-07 Score=90.46 Aligned_cols=162 Identities=10% Similarity=-0.046 Sum_probs=95.3
Q ss_pred ccccceEEehhHhhchhccc---hhhhhcccCCcch-------HHHhhcC-Cccccceeee---chhHHHhhhhhhhccC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNG---TYLGFQCLQICRF-------VQKDFKG-SFWDKLIVHT---STCTFENFIKIKYQIL 70 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG---~~fA~e~~GV~PD-------i~KaLgG-G~~PigAv~~---~~eI~d~~~~~~~~~~ 70 (329)
..||+++|+||++++|+++| ..++...+...+| ++|+++. | +++|++++ ++++++.+.....
T Consensus 213 ~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~--- 288 (412)
T 1ajs_A 213 KRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYN-ERVGNLTVVAKEPDSILRVLSQMQ--- 288 (412)
T ss_dssp HHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGG-GCEEEEEEECSSHHHHHHHHHHHH---
T ss_pred HHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCC-cceEEEEEecCCHHHHHHHHHHHH---
Confidence 35799999999999999886 4555554432344 4699998 8 49999998 8886554432000
Q ss_pred CCCccchhhhc-c-HHHHHHHHh-h----------HHhH-HHHHHHHHHHHHHHHHHHHHhCC-ceeeEE-eeceeeEEE
Q psy7882 71 KTPAHKLKISD-T-VRPHVQIKK-S----------VLER-FVHTYVVGNFLLTHLSKLREEFA-IVGDVR-GKGLMIGVD 134 (329)
Q Consensus 71 ~~~~hg~T~ag-n-lA~aaala~-~----------ile~-le~v~~lG~~L~~gL~eL~~~~p-~v~~VR-G~GLm~gIe 134 (329)
..+..++++ + ++++++.+. + .+++ .+++++..++|.+.|+++. .| .+.-+. ..|++..+.
T Consensus 289 --~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~~~~~~~~~~~~ 364 (412)
T 1ajs_A 289 --KIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALK--TPGTWNHITDQIGMFSFTG 364 (412)
T ss_dssp --HHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CSSCCHHHHHCCSSEEECC
T ss_pred --HHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCCCeeEEcCCCceEEEeC
Confidence 113344543 5 555544433 2 1222 5567777777777777642 11 111112 223333222
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+ + ...+...+.++||++.++ +|+.... + +++|++++++++
T Consensus 365 ~----------~---~~~~~~~l~~~gv~v~~~------~Ris~~~-~---~~~~i~~~~~~l 404 (412)
T 1ajs_A 365 L----------N---PKQVEYLINQKHIYLLPS------GRINMCG-L---TTKNLDYVATSI 404 (412)
T ss_dssp C----------C---HHHHHHHHHTTCEECCTT------SEEEGGG-C---CTTTHHHHHHHH
T ss_pred C----------C---HHHHHHHHHhCCEEecCC------cEEEeee-C---CHHHHHHHHHHH
Confidence 2 1 123455566899999863 4676552 2 468899999875
No 133
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=98.43 E-value=7.5e-07 Score=85.89 Aligned_cols=136 Identities=13% Similarity=-0.004 Sum_probs=83.1
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeeec-hhHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHTS-TCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
..||+++|+||+++.+ +.+...+..+| +.|.++++. +..|+++++ +++++.+.. ..+..
T Consensus 178 ~~~g~~li~D~~~~~~------~~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~--------~~~~~ 243 (392)
T 3qhx_A 178 ADSSAKVLVDNTFASP------ALQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAF--------LQNGA 243 (392)
T ss_dssp HHHTCEEEEECTTTCT------TTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHH--------HHHHH
T ss_pred HHcCCEEEEECCCccc------ccCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHH--------HHHhc
Confidence 3579999999999732 22344455678 459999853 457888887 577776653 22333
Q ss_pred hhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE------------------EeeceeeEEEee
Q psy7882 78 KISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV------------------RGKGLMIGVDLV 136 (329)
Q Consensus 78 T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V------------------RG~GLm~gIef~ 136 (329)
++..+ +++..++.. +.++. +++..+..+++.+.|+ ++|.+..| ||.|.|++|+|.
T Consensus 244 g~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~L~----~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~ 319 (392)
T 3qhx_A 244 GAVPGPFDAYLTMRGLKTLVLRMQRHSENAAAVAEFLA----EHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMR 319 (392)
T ss_dssp CCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH----TCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEET
T ss_pred CCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh----cCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeC
Confidence 44445 555555544 33322 4455555555555443 45555555 788999999995
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHCCceeec
Q psy7882 137 QDKETKVPLNSRHMTHILDSCKEHGLLLGR 166 (329)
Q Consensus 137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~ 166 (329)
.+ ......++..+...|+.+..
T Consensus 320 ~~--------~~~~~~~~~~l~~~~~~~s~ 341 (392)
T 3qhx_A 320 AG--------RTAAEQLCAKTNIFILAESL 341 (392)
T ss_dssp TC--------HHHHHHHHHHCSSSEECSCC
T ss_pred Cc--------HHHHHHHHHhCCCceECCCC
Confidence 31 13455677777666665543
No 134
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=98.42 E-value=1.1e-07 Score=90.14 Aligned_cols=163 Identities=13% Similarity=-0.023 Sum_probs=92.7
Q ss_pred ccccceEEehhHhhchhccc--hhhhhcccC-Ccch------HHHhhc-CCccccceeee---chhHHHhhhhhhhccCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNG--TYLGFQCLQ-ICRF------VQKDFK-GSFWDKLIVHT---STCTFENFIKIKYQILK 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG--~~fA~e~~G-V~PD------i~KaLg-GG~~PigAv~~---~~eI~d~~~~~~~~~~~ 71 (329)
..+|+++|.||++++|+++| .......+. ..+| ++|+++ +| +++|++++ ++++++.+.....
T Consensus 199 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~~~---- 273 (394)
T 2ay1_A 199 EKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYR-ERTGCLLALCADAATRELAQGAMA---- 273 (394)
T ss_dssp HHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGG-GCEEEEEEECSSHHHHHHHHHHHH----
T ss_pred HHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcC-CccceEEEEeCCHHHHHHHHHHHH----
Confidence 35799999999999998765 333333232 2244 469998 77 49999988 6766554432000
Q ss_pred CCccchhhhc-c-HHHHHHHHh-h----------HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEee
Q psy7882 72 TPAHKLKISD-T-VRPHVQIKK-S----------VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLV 136 (329)
Q Consensus 72 ~~~hg~T~ag-n-lA~aaala~-~----------ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~ 136 (329)
..+..++++ + ++++++.+. + .+++ .+++++..++|.+.|+++....+ +.-+. .-|+++.+++.
T Consensus 274 -~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~~~~~ 351 (394)
T 2ay1_A 274 -FLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDR-FGFVAEHRGMFSRLGAT 351 (394)
T ss_dssp -HHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST-TTHHHHCCSSEEECCCC
T ss_pred -HHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-eeEEcCCceEEEeeCCC
Confidence 012223332 4 444444332 1 1222 45566667777777766531101 11112 23555444331
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 137 QDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
. ..+...+.++||++.++ +|+.++. + +++|++++++++
T Consensus 352 ----------~---~~~~~~l~~~gi~v~~~------~Ris~~~-~---~~~~i~~~~~~l 389 (394)
T 2ay1_A 352 ----------P---EQVKRIKEEFGIYMVGD------SRINIAG-L---NDNTIPILARAI 389 (394)
T ss_dssp ----------H---HHHHHHHHHHCEECCTT------CEEEGGG-C---CTTTHHHHHHHH
T ss_pred ----------H---HHHHHHHHhCCEEecCC------CeEEeec-C---CHhhHHHHHHHH
Confidence 1 23566777899999763 4787763 3 468999999875
No 135
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=98.36 E-value=9.2e-07 Score=83.96 Aligned_cols=174 Identities=11% Similarity=0.008 Sum_probs=101.8
Q ss_pred ccccceEEehhHhh-chhccchhhhhcccCCcch---HH----HhhcCCccccceeeech-hHHHhhhhhhhccCC----
Q psy7882 5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF---VQ----KDFKGSFWDKLIVHTST-CTFENFIKIKYQILK---- 71 (329)
Q Consensus 5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD---i~----KaLgGG~~PigAv~~~~-eI~d~~~~~~~~~~~---- 71 (329)
..+|+++|.||+++ |....+ ...+..+| ++ |+++|| ..|++++++ ++.+.+.........
T Consensus 168 ~~~~~~li~D~a~~~g~~~~~-----~~~~~~~di~~~S~s~~K~l~~g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~ 240 (391)
T 3dr4_A 168 RRHNLLVIEDAAEAVGATYRG-----KKSGSLGDCATFSFFGNAIITTG--EGGMITTNDDDLAAKMRLLRGQGMDPNRR 240 (391)
T ss_dssp HHTTCEEEEECTTCTTCEETT-----EETTSSSSEEEEECBTTSSSCCB--SCEEEEESCHHHHHHHHHHHBTTCCTTST
T ss_pred HHcCCEEEEECcccccceECC-----eeecccCCEEEEECCCCCcCCcC--CeEEEEECCHHHHHHHHHHHhcCCCCCCc
Confidence 45799999999987 332222 24455567 34 999886 366666654 466554420000000
Q ss_pred --CCccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceee-----EEeeceeeEEEeecCCCC
Q psy7882 72 --TPAHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGD-----VRGKGLMIGVDLVQDKET 141 (329)
Q Consensus 72 --~~~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~-----VRG~GLm~gIef~~d~~~ 141 (329)
....+..+..+ ++++.++.. +.+++ .++.+++.+++.+.|+++ ....... .++.+.++.+.+.....
T Consensus 241 ~~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 317 (391)
T 3dr4_A 241 YWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARL--GNRVTKPHVALTGRHVFWMYTVRLGEGLS- 317 (391)
T ss_dssp TCCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG--TTSEECCCCCTTSCCCCSSEEEEECSSCS-
T ss_pred ccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CccccCcCCCCCCcceeEEEEEEECCccc-
Confidence 01122335555 666666555 44554 677888888888888876 2222211 23445566777743111
Q ss_pred CCCCChHHHHHHHHHHHHCCceeeccCC----------------------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCKEHGLLLGRGGL----------------------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~e~GVLl~~~G~----------------------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
. ....+.+.|.++||.+.+... ...++++.+.... |++|||.+++++
T Consensus 318 ---~---~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~---t~edi~~~~~~l 386 (391)
T 3dr4_A 318 ---T---TRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGL---TEADIDRVIAAL 386 (391)
T ss_dssp ---S---CHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTC---CHHHHHHHHHHH
T ss_pred ---h---hHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCC---CHHHHHHHHHHH
Confidence 1 135688899999999885310 1245666444444 689999999975
No 136
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=98.35 E-value=8.8e-07 Score=84.86 Aligned_cols=168 Identities=10% Similarity=-0.047 Sum_probs=94.9
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHH-hhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFE-NFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d-~~~~~~~~~~~~~~hg~ 77 (329)
..||+++|+||++..+ ..+... .+| +| ++|.++|...|+ |++++++++++ .+.. ..++.
T Consensus 176 ~~~~~~li~De~~~~~-~~~~~~---~~~--~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~--------~~~~~ 241 (398)
T 2rfv_A 176 HQQGALLVVDNTFMSP-YCQQPL---QLG--ADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFV--------GLKDI 241 (398)
T ss_dssp HHTTCEEEEECTTTCT-TTCCGG---GGT--CSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHT--------HHHHT
T ss_pred HHcCCEEEEECCCccc-ccCCch---hhC--CcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHH--------HHHhC
Confidence 3579999999998843 222221 233 56 469998754688 89999998876 4432 12222
Q ss_pred -hhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHH----------HHhCCcee----eEEeeceeeEEEeecCC
Q psy7882 78 -KISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKL----------REEFAIVG----DVRGKGLMIGVDLVQDK 139 (329)
Q Consensus 78 -T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL----------~~~~p~v~----~VRG~GLm~gIef~~d~ 139 (329)
+++.+ ++++++++. +.+.. +++..+..+.+.+.|++. ...+|.+. +.++.|.|+.+++...
T Consensus 242 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~- 320 (398)
T 2rfv_A 242 TGGCMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGG- 320 (398)
T ss_dssp TCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTH-
T ss_pred CCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCC-
Confidence 33455 555555554 33322 334444444444444331 01111110 1246789999988521
Q ss_pred CCCCCCChHHHHHHHHHHHHCCceeecc-------------------------CCCCCEEEEeCccccCcCCHHHHHHHH
Q psy7882 140 ETKVPLNSRHMTHILDSCKEHGLLLGRG-------------------------GLSGNTLTALQPKLLNYWTDFVGTPCL 194 (329)
Q Consensus 140 ~~~~p~~~~~~~~~~~~l~e~GVLl~~~-------------------------G~~~nvIrl~PPL~It~~t~eeId~~l 194 (329)
......+...+...|+.+.+. |...+.+|+.+++.. ++++|+.++
T Consensus 321 -------~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~---~~~~i~~l~ 390 (398)
T 2rfv_A 321 -------LEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLED---PEDIINDLE 390 (398)
T ss_dssp -------HHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSC---HHHHHHHHH
T ss_pred -------HHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCC---HHHHHHHHH
Confidence 122344555555556654432 112589999999744 689999998
Q ss_pred hcc
Q psy7882 195 DCE 197 (329)
Q Consensus 195 ~~~ 197 (329)
+++
T Consensus 391 ~al 393 (398)
T 2rfv_A 391 HAI 393 (398)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 137
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=98.32 E-value=1.6e-06 Score=81.43 Aligned_cols=173 Identities=10% Similarity=-0.006 Sum_probs=97.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HH----HhhcC-Cccccceeeech-hHHHhhhhhhh-ccCCCC-
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQ----KDFKG-SFWDKLIVHTST-CTFENFIKIKY-QILKTP- 73 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~----KaLgG-G~~PigAv~~~~-eI~d~~~~~~~-~~~~~~- 73 (329)
..+|+++|+||+++.+.. +..+.++..+| .+ |.+++ |. .|++++++ ++.+.+..... +....+
T Consensus 149 ~~~~~~li~D~~~~~g~~----~~~~~~~~~~d~~~~s~~~~K~l~~~g~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (374)
T 3uwc_A 149 KKHNLHIVEDACQTILGR----INDKFVGSWGQFACFSLHPLKNLNVWSD--AGVIITHSDEYAEKLRLYRNHGLINRDV 222 (374)
T ss_dssp HHTTCEEEEECTTCTTCE----ETTEETTSSSSEEEEECSSSSSSCCSSC--CEEEEESCHHHHHHHHHHTBTTEEETTE
T ss_pred HHcCCEEEEeCCCccCce----eCCeeccccccEEEEeCCCCCcCCccce--eEEEEeCCHHHHHHHHHHHhcCccccCc
Confidence 457999999999984322 44456676678 23 99988 63 66676654 56655442000 000011
Q ss_pred --ccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHH--hCCceeeEEeeceeeEEEeecCCCCCCCCC
Q psy7882 74 --AHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLRE--EFAIVGDVRGKGLMIGVDLVQDKETKVPLN 146 (329)
Q Consensus 74 --~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~--~~p~v~~VRG~GLm~gIef~~d~~~~~p~~ 146 (329)
..+.++..+ ++++.++.. +.+++ .++.+++.+++.+.|+++.. +.+...+.+ ...+..+.+...
T Consensus 223 ~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-------- 293 (374)
T 3uwc_A 223 CVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGV-YHVFHIYVLRVK-------- 293 (374)
T ss_dssp ESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTE-ECCCSSEEEEET--------
T ss_pred cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCC-ceeeEEEEEEcC--------
Confidence 123344444 555555554 44554 67788888888888776521 111111111 111112222111
Q ss_pred hHHHHHHHHHHHHCCceeeccCCC-------------------------CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCKEHGLLLGRGGLS-------------------------GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~e~GVLl~~~G~~-------------------------~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
-...+.+.|.++||.+.+..+. .+.+|+.+.... |++||+++++++
T Consensus 294 --~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~---t~edi~~~~~~l 364 (374)
T 3uwc_A 294 --YRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYL---TEEEINYIIKKV 364 (374)
T ss_dssp --THHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTS---CHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCC---CHHHHHHHHHHH
Confidence 1346888899999988764200 156777555444 689999999985
No 138
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=98.32 E-value=9.7e-06 Score=76.75 Aligned_cols=172 Identities=11% Similarity=0.053 Sum_probs=98.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC---------
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL--------- 70 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~--------- 70 (329)
..+|+++|+||+++ +|... +....++ +| +.|.+ |+ .++|++++++++++.+........
T Consensus 196 ~~~~~~li~D~a~~-~~~~~--~~~~~~~--~di~~~s~sK~~-~~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (420)
T 1t3i_A 196 HQAGAKVLVDACQS-APHYP--LDVQLID--CDWLVASGHKMC-AP-TGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDH 268 (420)
T ss_dssp HHTTCEEEEECTTT-TTTSC--CCHHHHT--CSEEEEEGGGTT-SC-TTCEEEEECHHHHHHSCCCSCSTTSEEEECSSC
T ss_pred HHcCCEEEEEhhhc-cCCcc--CchhhcC--CCEEEEehhhhc-CC-CceEEEEEchHHHhhcCceecCCCccccccccc
Confidence 35799999999987 33331 1223333 67 45954 44 258999999998877643000000
Q ss_pred ---CCCccchhhhcc-HHHHHHHH-h-hHH-----hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE---eeceeeEEEe
Q psy7882 71 ---KTPAHKLKISDT-VRPHVQIK-K-SVL-----ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR---GKGLMIGVDL 135 (329)
Q Consensus 71 ---~~~~hg~T~agn-lA~aaala-~-~il-----e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR---G~GLm~gIef 135 (329)
....+..+++.+ +++++++. . +.+ ++ .++.+++.+++.+.|+++. ....+...+ +.|.++.+.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~ 347 (420)
T 1t3i_A 269 FTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIP-QLRLYGPNPKHGDRAALASFNV 347 (420)
T ss_dssp EEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCT-TEEEESCCGGGSCBCSEEEEEE
T ss_pred cCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCC-CeEEeCCCccccccCCEEEEEE
Confidence 000001112233 44444443 2 333 22 5566677777777776531 111111111 3488888886
Q ss_pred ecCCCCCCCCChHHHHHHHHHHHHCCceeeccC---------CC-CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 136 VQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG---------LS-GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 136 ~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G---------~~-~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.. . + ...+.+.|.++||++.+.. .. .+.+|+.++... +++|++++++++
T Consensus 348 ~~-~------~---~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~---~~~~i~~~~~~l 406 (420)
T 1t3i_A 348 AG-L------H---ASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYN---TKEEIDLFLQSL 406 (420)
T ss_dssp TT-B------C---HHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTC---CHHHHHHHHHHH
T ss_pred CC-C------C---HHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCCC---CHHHHHHHHHHH
Confidence 31 1 1 2357788889999998741 01 578999988765 589999999875
No 139
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=98.32 E-value=2e-06 Score=84.82 Aligned_cols=175 Identities=8% Similarity=-0.061 Sum_probs=100.5
Q ss_pred ccccceEEehhHhhchhcc-------chh--hhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhh---hhhcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDN-------GTY--LGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIK---IKYQI 69 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRT-------G~~--fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~---~~~~~ 69 (329)
..+|++||+||+++|+.+. |.. +.....|+..- ..|.+.||. ++|+++++++.+..... .....
T Consensus 233 ~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~ 311 (497)
T 3mc6_A 233 QKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPK-GSSVIMYRNSDLRMHQYYVNPAWTG 311 (497)
T ss_dssp HHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCS-SCEEEECSSHHHHTTTSCCBTTCTT
T ss_pred HHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCC-CceeEEecCHHHHhhhhcccccccC
Confidence 4679999999999988664 211 33444555221 349887774 89999998877654321 00000
Q ss_pred ---CCCCccchhhhcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC
Q psy7882 70 ---LKTPAHKLKISDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET 141 (329)
Q Consensus 70 ---~~~~~hg~T~agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~ 141 (329)
......++.+.+. +++.++++. +-+++ .++..++.+++.+.|++.......+.. ..+.++.+... .
T Consensus 312 ~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~--~~~~~v~~~~~--~-- 385 (497)
T 3mc6_A 312 GLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGN--PRYSVISFSSK--T-- 385 (497)
T ss_dssp SCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSC--CCSSEEEEECT--T--
T ss_pred CCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC--CCeeEEEEeCC--C--
Confidence 0011122222222 344444443 22233 667778888888888763111211211 33444444421 1
Q ss_pred CCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.-...+.+.|.++||++.... .++.+|+.++ .+ +++|++++++++
T Consensus 386 ------~~~~~l~~~L~~~Gi~v~~~~-~~~~~ri~~~-~~---t~e~i~~~~~~L 430 (497)
T 3mc6_A 386 ------LNIHELSDRLSKKGWHFNALQ-KPVALHMAFT-RL---SAHVVDEICDIL 430 (497)
T ss_dssp ------TTHHHHHHHHHTTTCBCEECC-SSCCEEEECC-TT---TTCTHHHHHHHH
T ss_pred ------CCHHHHHHHHHhCCEEEecCC-CCCeEEEEEe-CC---CHHHHHHHHHHH
Confidence 014568899999999887653 3567788877 33 578999999875
No 140
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=98.30 E-value=2.8e-06 Score=80.56 Aligned_cols=169 Identities=10% Similarity=-0.023 Sum_probs=93.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccc-eeeechhHHHhhhhhhhccCC---CCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKL-IVHTSTCTFENFIKIKYQILK---TPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pig-Av~~~~eI~d~~~~~~~~~~~---~~~h 75 (329)
..+|+++|+||+++ +|... +..+.++ +| +.|.++ + .+| ++++++++.+.+.+....... ....
T Consensus 192 ~~~~~~li~D~a~~-~g~~~--~~~~~~~--~d~~~~s~~K~~g-~--~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 263 (406)
T 3cai_A 192 HDVGALVVVDHSAA-APYRL--LDIRETD--ADVVTVNAHAWGG-P--PIGAMVFRDPSVMNSFGSVSTNPYATGPARLE 263 (406)
T ss_dssp HHTTCEEEEECTTT-TTTCC--CCHHHHC--CSEEEEEGGGGTS-C--SCEEEEESCHHHHHTSCCCCSCTTCCGGGGGC
T ss_pred HHcCCEEEEEcccc-cCCCC--CCchhcC--CCEEEeehhhhcC-C--CcCeEEEEehHHHhhcCCcccCCCCCcccccc
Confidence 35799999999997 33221 2223334 57 469654 3 288 888999887765420000000 0000
Q ss_pred chhhhcc-HH---HHHHHHh-h----------------HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEE
Q psy7882 76 KLKISDT-VR---PHVQIKK-S----------------VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGV 133 (329)
Q Consensus 76 g~T~agn-lA---~aaala~-~----------------ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gI 133 (329)
.+| .+ .+ +.++++. + .+++ .++++++.+++.+.|+++. .........+.+.++.+
T Consensus 264 ~~t--~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~ 340 (406)
T 3cai_A 264 IGV--HQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLP-LVMLIGRPEAQIPVVSF 340 (406)
T ss_dssp CSC--CCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT-TEEECCCCSSBCSEEEE
T ss_pred CCC--ccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCC-CeEEcCCccccCCEEEE
Confidence 111 23 22 2233332 1 1333 5566677777777776531 11111111123446777
Q ss_pred EeecCCCCCCCCChHHHHHHHHHHHHCCceeeccC-----------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 134 DLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG-----------LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 134 ef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G-----------~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.. . + ...+.+.|.++||++.+.. ...+.+|+.++... +++|++++++++
T Consensus 341 ~~~~-~------~---~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~---t~e~i~~~~~~l 402 (406)
T 3cai_A 341 AVHK-V------P---ADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYS---TMAEVDQLVRAL 402 (406)
T ss_dssp EETT-B------C---HHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTC---CHHHHHHHHHHH
T ss_pred EECC-c------C---HHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCC---CHHHHHHHHHHH
Confidence 7631 1 1 3457788889999998642 12478999998766 589999999875
No 141
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=98.30 E-value=4.1e-06 Score=77.43 Aligned_cols=166 Identities=10% Similarity=-0.035 Sum_probs=98.3
Q ss_pred cceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHh---------hhhhhhccCCCC
Q psy7882 8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFEN---------FIKIKYQILKTP 73 (329)
Q Consensus 8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~---------~~~~~~~~~~~~ 73 (329)
|+++|.||+++ +|... +..+.+ .+| ++|.++|+. .+|++++++++.+. +....... ...
T Consensus 153 ~~~li~D~a~~-~~~~~--~~~~~~--~~d~~~~s~~K~~~~~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 225 (352)
T 1iug_A 153 EGLVGADMVTS-LLVGE--VALEAM--GVDAAASGSQKGLMCPP-GLGFVALSPRALERLKPRGYYLDLARELKAQ-KEG 225 (352)
T ss_dssp TCEEEEECTTT-BTTBC--CCSGGG--TCSEEEEESSSTTCCCS-CEEEEEECHHHHHTCCCCSSTTCHHHHHHHH-TTT
T ss_pred CCEEEEECCcc-ccCcc--eecccc--CeeEEEecCcccccCCC-ceeEEEECHHHHHHhhCCCceeeHHHHHhhc-ccC
Confidence 99999999986 44321 122222 367 359888763 68999999987654 11000000 001
Q ss_pred ccchhhhcc-HH---HHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC
Q psy7882 74 AHKLKISDT-VR---PHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN 146 (329)
Q Consensus 74 ~hg~T~agn-lA---~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~ 146 (329)
.. +++.+ .+ +.++++. +.+++ .++.+++.+++.+.|+++ ....+... ..|.++.+.+.... +
T Consensus 226 ~~--~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~-~~~~~~~~~~~~~~------~ 294 (352)
T 1iug_A 226 ES--AWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEG--GLRPVPKR-FSPAVAAFYLPEGV------P 294 (352)
T ss_dssp CC--SSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT--TCEESCSS-BCTTCEEEECCTTC------C
T ss_pred CC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCcccccc-cCCeEEEEEcCCCC------C
Confidence 11 11223 22 2333332 12333 667788888888888774 22221111 25778888774211 1
Q ss_pred hHHHHHHHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|.++||++.+... ..+.+|+.++... +++|++++++++
T Consensus 295 ---~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l 341 (352)
T 1iug_A 295 ---YARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAY---DRYEALGVAGMF 341 (352)
T ss_dssp ---HHHHHHHHHTTTEECEECCGGGTTTEEEECCCSSC---CHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHCCEEEEeCCCccCCCEEEEEccccC---CHHHHHHHHHHH
Confidence 34588888999999987421 3578999988755 589999999985
No 142
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=98.29 E-value=7.8e-06 Score=76.99 Aligned_cols=172 Identities=12% Similarity=0.008 Sum_probs=99.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc-----
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA----- 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~----- 74 (329)
..+|+++|+||+++ +|.. .+....+ .+| ++|.++|+. ++|++++++++++.+...... ..++.
T Consensus 171 ~~~~~~li~D~a~~-~~~~--~~~~~~~--~~d~~~~s~sK~l~g~~-G~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 243 (393)
T 2huf_A 171 HQHNCLLIVDTVAS-LGGA--PMFMDRW--EIDAMYTGSQKVLGAPP-GITPVSFSHRAVERYKRRNTK-VKVYYWDMSL 243 (393)
T ss_dssp HHTTCEEEEECTTT-BTTB--CCCTTTT--TCSEEECCSSSTTCCCS-SCEEEEECHHHHHHHHTCSSC-CSCGGGCHHH
T ss_pred HHcCCEEEEEcccc-cCCC--Ccchhhc--CccEEEECCCcccccCC-CeEEEEECHHHHHHHhhcCCC-CceEEEchHH
Confidence 35799999999975 5433 1122222 367 359988763 779999999998876531000 00110
Q ss_pred ----------cchhhhc-cH-HHH---HHHHh--h-HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEE
Q psy7882 75 ----------HKLKISD-TV-RPH---VQIKK--S-VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVD 134 (329)
Q Consensus 75 ----------hg~T~ag-nl-A~a---aala~--~-ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIe 134 (329)
+..+++. +. +++ ++++. + -+++ .++.+++.+++.+.|+++ ......... ..+.++.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~ 321 (393)
T 2huf_A 244 VGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDA--GFELYADPKDRLSTVTTIK 321 (393)
T ss_dssp HHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCBSSCGGGBCTTEEEEE
T ss_pred HHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc--CCeeccCccccCCcEEEEE
Confidence 1122222 22 222 23322 1 1223 567788888888888775 333222110 124577777
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHC-CceeeccCC--CCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882 135 LVQDKETKVPLNSRHMTHILDSCKEH-GLLLGRGGL--SGNTLTALQ-PKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 135 f~~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G~--~~nvIrl~P-PL~It~~t~eeId~~l~~~ 197 (329)
+... .+ ...+.+.|.++ ||++.+... ..+.+|+.+ ++.+ +++|++++++++
T Consensus 322 ~~~~------~~---~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~---~~e~i~~~~~~l 376 (393)
T 2huf_A 322 VPQG------VD---WLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNA---TTERVDRVLQVF 376 (393)
T ss_dssp CCTT------CC---HHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGC---SHHHHHHHHHHH
T ss_pred cCCC------CC---HHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcC---CHHHHHHHHHHH
Confidence 6321 01 34577888765 999986421 357999999 7765 478999999985
No 143
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=98.29 E-value=1.5e-06 Score=84.48 Aligned_cols=116 Identities=13% Similarity=-0.041 Sum_probs=70.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccce--ee-echhHHHhhhhhhhccCCCCccchh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLI--VH-TSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigA--v~-~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
..||+++|+||+++. |.++....+|+.+. +.|.++|+..++++ ++ .++++++.+.. ..+..+
T Consensus 179 ~~~g~~livDe~~~~----~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~--------~~~~~g 246 (400)
T 3nmy_A 179 RKHGLLTVVDNTFAS----PMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAF--------LQNSIG 246 (400)
T ss_dssp HHTTCEEEEECTTTH----HHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHH--------HHHHHC
T ss_pred HHcCCEEEEECCCcc----cccCChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHH--------HHHhcC
Confidence 467999999999862 22222233455444 56999987657755 43 46677766543 222333
Q ss_pred hhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE------------------EeeceeeEEEee
Q psy7882 79 ISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV------------------RGKGLMIGVDLV 136 (329)
Q Consensus 79 ~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V------------------RG~GLm~gIef~ 136 (329)
...+ +++..++.. +.++. +++..+....+.+.| +++|.+..| ||.|.|++|++.
T Consensus 247 ~~~~~~~a~~~l~~l~~l~~r~~~~~~~a~~l~~~L----~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~ 321 (400)
T 3nmy_A 247 GVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWL----ETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLK 321 (400)
T ss_dssp CBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH----TTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEET
T ss_pred CCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHH----HcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeC
Confidence 3444 556555554 43432 444444444444444 457777777 899999999995
No 144
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=98.29 E-value=2e-06 Score=82.31 Aligned_cols=172 Identities=10% Similarity=-0.018 Sum_probs=99.8
Q ss_pred ccccceEEehhHhhchh-ccchhhhhcccCCcch-----H--HHhhcC-Cccccceeeec-hhHHHhhhhh-hhccCCCC
Q psy7882 5 YYRDCGVVVSAVDFGSG-DNGTYLGFQCLQICRF-----V--QKDFKG-SFWDKLIVHTS-TCTFENFIKI-KYQILKTP 73 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfG-RTG~~fA~e~~GV~PD-----i--~KaLgG-G~~PigAv~~~-~eI~d~~~~~-~~~~~~~~ 73 (329)
..+|+++|+||+++.+. ..|. .++..+| + +|.+++ | +.|+++++ +++++.+... ..+....+
T Consensus 175 ~~~~~~li~Dea~~~g~~~~~~-----~~~~~~di~~~S~~~sK~~~~~G--~~g~~~~~~~~~~~~l~~~~~~g~~~~~ 247 (399)
T 2oga_A 175 DRHGLHIVEDAAQAHGARYRGR-----RIGAGSSVAAFSFYPGKNLGCFG--DGGAVVTGDPELAERLRMLRNYGSRQKY 247 (399)
T ss_dssp HHHTCEECEECTTCTTCEETTE-----ETTCTTCEEEEECCTTSSSCCSS--CCEEEEESCHHHHHHHHHHHBTTCSSTT
T ss_pred HHcCCEEEEECcccccCccCCe-----ecccccCEEEEeCCCCccCCcCC--ceEEEEeCCHHHHHHHHHHHhcCccccc
Confidence 35799999999997331 2222 2344468 2 499987 6 67888876 7887766431 01100001
Q ss_pred c---cchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCC
Q psy7882 74 A---HKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLN 146 (329)
Q Consensus 74 ~---hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~ 146 (329)
. .+.++..+ ++++++.+. +.+++ .++.+++.+++.+.|+++. .......- .+.++++.+.+...
T Consensus 248 ~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~-------- 318 (399)
T 2oga_A 248 SHETKGTNSRLDEMQAAVLRIRLAHLDSWNGRRSALAAEYLSGLAGLP-GIGLPVTAPDTDPVWHLFTVRTE-------- 318 (399)
T ss_dssp CCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCT-TCBCCCCCTTEECCCSSEEEECS--------
T ss_pred cccccccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CccccCCCCCCcceeEEEEEECC--------
Confidence 1 13344556 666666555 54444 5667777777777766531 11111100 23344433444211
Q ss_pred hHHHHHHHHHHHHCCceeeccCCC-------------------------CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCKEHGLLLGRGGLS-------------------------GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~e~GVLl~~~G~~-------------------------~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
-...+.+.|.++||++.+.... .+++|+.++... |++|++++++++
T Consensus 319 --~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~---t~edi~~~~~~l 389 (399)
T 2oga_A 319 --RRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHL---ERPQALRVIDAV 389 (399)
T ss_dssp --SHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTC---CHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCC---CHHHHHHHHHHH
Confidence 1345888889999998763210 157999887766 589999999985
No 145
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=98.27 E-value=2.2e-07 Score=88.01 Aligned_cols=163 Identities=10% Similarity=-0.016 Sum_probs=88.5
Q ss_pred cccceEEehhHhhchhccc--hhhhhcccCCcch-------HHHhhc-CCccccceeee---chhHHHhhhhhhhccCCC
Q psy7882 6 YRDCGVVVSAVDFGSGDNG--TYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHT---STCTFENFIKIKYQILKT 72 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG--~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~---~~eI~d~~~~~~~~~~~~ 72 (329)
.||+++|.||++++|++.| ..++...+...+| ++|+++ .|+ ++|.+++ ++++++.+...-.
T Consensus 203 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~~~~~~~~~~~~~----- 276 (396)
T 2q7w_A 203 EKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNE-RVGACTLVAADSETVDRAFSQMK----- 276 (396)
T ss_dssp HHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGG-CCEEEEEECSSHHHHHHHHHHHH-----
T ss_pred HCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEecccccccccc-ccceEEEEcCCHHHHHHHHHHHH-----
Confidence 5799999999999998765 4444544433344 469998 784 9999986 5644333321000
Q ss_pred Cccchhhhc-c-HHHHHHHHh-h----------HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecC
Q psy7882 73 PAHKLKISD-T-VRPHVQIKK-S----------VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQD 138 (329)
Q Consensus 73 ~~hg~T~ag-n-lA~aaala~-~----------ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d 138 (329)
..+..++++ + ++++++.+. + .+++ .+++++..+++.+.|+++....+.......-|++..+.+.
T Consensus 277 ~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-- 354 (396)
T 2q7w_A 277 AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLT-- 354 (396)
T ss_dssp HHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCC--
T ss_pred HHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecCC--
Confidence 011223332 4 444444332 1 1122 3445566666666665541000011111123444433321
Q ss_pred CCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 139 KETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 139 ~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
. ..+...+.++||++.++ +|+.++.+ +++|++++++++
T Consensus 355 --------~---~~~~~~l~~~gv~v~~~------~Ris~~~~----~~e~i~~~~~~l 392 (396)
T 2q7w_A 355 --------K---EQVLRLREEFGVYAVAS------GRVNVAGM----TPDNMAPLCEAI 392 (396)
T ss_dssp --------H---HHHHHHHHHHCEECCTT------CEEEGGGC----CTTTHHHHHHHH
T ss_pred --------H---HHHHHHHHhcCeeecCC------ceEEEeec----CHHHHHHHHHHH
Confidence 1 23556677899999762 58887743 467899988874
No 146
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=98.26 E-value=3.1e-06 Score=79.89 Aligned_cols=176 Identities=11% Similarity=0.035 Sum_probs=101.3
Q ss_pred ccccceEEehhHhh-chhccchhhhhcccCCcch-----HH--HhhcCCccccceeeec-hhHHHhhhhhhhccC-----
Q psy7882 5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF-----VQ--KDFKGSFWDKLIVHTS-TCTFENFIKIKYQIL----- 70 (329)
Q Consensus 5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD-----i~--KaLgGG~~PigAv~~~-~eI~d~~~~~~~~~~----- 70 (329)
..+|+++|.||+++ |+...|. .++. +| +. |.++|| ..|.++++ +++.+.+........
T Consensus 151 ~~~~~~li~D~a~~~g~~~~~~-----~~~~-~d~~~~S~~k~K~l~~~--~~g~~~~~~~~~~~~l~~~~~~~~~~~~~ 222 (393)
T 1mdo_A 151 ERYGIPVIEDAAHATGTSYKGR-----HIGA-RGTAIFSFHAIKNITCA--EGGIVVTDNPQFADKLRSLKFHGLGVDAW 222 (393)
T ss_dssp HHHTCCBCEECTTCTTCEETTE-----ETTS-SSEEEEECCTTSSSCSS--SCEEEEESCHHHHHHHHHHTBTTEECC--
T ss_pred HHcCCeEEEECccccCCeECCe-----ecCC-CCeEEEeCCCCCccccc--cceEEEeCCHHHHHHHHHHHhcCCcccch
Confidence 35799999999998 5544443 2333 78 23 999886 36778776 778776653100000
Q ss_pred -------CCCc----cchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCcee--eEEeeceeeEEE
Q psy7882 71 -------KTPA----HKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVG--DVRGKGLMIGVD 134 (329)
Q Consensus 71 -------~~~~----hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~--~VRG~GLm~gIe 134 (329)
.... .|..+..+ ++++.++.. +.+++ +++.+++.++|.+.|+++--+..... +.++.+.++.+.
T Consensus 223 ~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~ 302 (393)
T 1mdo_A 223 DRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIR 302 (393)
T ss_dssp ---------CCEESSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEE
T ss_pred hhhcccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEE
Confidence 0000 11112334 665555544 43444 66677777778777765410000011 245566778888
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCC-----------------------CCEEEEeCccccCcCCHHHHH
Q psy7882 135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLS-----------------------GNTLTALQPKLLNYWTDFVGT 191 (329)
Q Consensus 135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~-----------------------~nvIrl~PPL~It~~t~eeId 191 (329)
+..+.. .. ....+.+.|.++||++.+.... .+.+|+.+...+ |++|++
T Consensus 303 ~~~~~~---~~---~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~---t~~~i~ 373 (393)
T 1mdo_A 303 VDEARC---GI---TRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDM---TESDFD 373 (393)
T ss_dssp CCHHHH---SS---CHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTC---CHHHHH
T ss_pred eccccc---cc---CHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCC---CHHHHH
Confidence 742000 00 1356888899999988763210 236888665444 689999
Q ss_pred HHHhcc
Q psy7882 192 PCLDCE 197 (329)
Q Consensus 192 ~~l~~~ 197 (329)
.+++++
T Consensus 374 ~~~~~l 379 (393)
T 1mdo_A 374 RVITAL 379 (393)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999985
No 147
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=98.25 E-value=8.8e-06 Score=78.56 Aligned_cols=161 Identities=12% Similarity=-0.066 Sum_probs=91.4
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeech-h---------------------
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTST-C--------------------- 57 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~-e--------------------- 57 (329)
.+||+++|+||++++++... ......+| ++|.++|...++|++++.+ +
T Consensus 167 ~~~~~~li~D~~~~~~~~~~-----~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (412)
T 2cb1_A 167 EEAGVALVVDNTFGAAGALC-----RPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWE 241 (412)
T ss_dssp HHHTCEEEEECGGGTTTTSC-----CGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HH
T ss_pred HHcCCEEEEECCCccccccC-----CccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhh
Confidence 35799999999999774221 22234577 4699987555788777655 2
Q ss_pred ------HHHhhhhhhhccCCCCccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE----
Q psy7882 58 ------TFENFIKIKYQILKTPAHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV---- 124 (329)
Q Consensus 58 ------I~d~~~~~~~~~~~~~~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V---- 124 (329)
+++.+.. . ..+..++..+ .+++.++.. +.++. +++..++.++|.+.|.+ ++.+..|
T Consensus 242 ~~~~~~~~~~~r~---~----~~~~~g~~~~~~~a~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~----~~~v~~v~~p~ 310 (412)
T 2cb1_A 242 ALRARCFPERVRT---L----GLSLCGMALSPFNAYLLFQGLETVALRVARMSETARFLAERLQG----HPKVKALRYPG 310 (412)
T ss_dssp HHGGGHHHHHHHH---H----HTTTTCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHT----CTTCSEEECTT
T ss_pred ccchHHHHHHHHH---H----HHHhcCCCCChHHhHHHHcCCchHHHHHHHHHHHHHHHHHHHHc----CCCeeEEECCC
Confidence 2222211 0 0011112223 445444444 44433 55566777777776654 4444444
Q ss_pred --------------EeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC---------------------
Q psy7882 125 --------------RGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL--------------------- 169 (329)
Q Consensus 125 --------------RG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~--------------------- 169 (329)
+|.|.++.|++ .+ ...+.+.+.+.|+++ ....
T Consensus 311 ~~~~p~~~~~~~~~~~~~~iv~~~~-~~-----------~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~ 377 (412)
T 2cb1_A 311 LPEDPAHRNARKYLASGGPILTLDL-GD-----------LERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEE 377 (412)
T ss_dssp STTCTTHHHHHHHCSSSCSEEEEEC-SS-----------HHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHH
T ss_pred CCCCccHHHHHHhCCCCceEEEEEe-CC-----------HHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHH
Confidence 46788999998 32 123455555678886 3210
Q ss_pred -------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 170 -------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 170 -------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
....||+...+- +++++|+.+++++
T Consensus 378 ~~~~~g~~~~~iR~s~g~~---~~~~~i~~l~~al 409 (412)
T 2cb1_A 378 ARLQAGVTPGLVRVSVGLE---DPLDLLALFEEAL 409 (412)
T ss_dssp HHHHTTCCTTEEEEECCSS---CHHHHHHHHHHHH
T ss_pred HHHhcCCCCCeEEEEeccC---CHHHHHHHHHHHH
Confidence 035666665433 3678888888764
No 148
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=98.23 E-value=6.3e-06 Score=80.51 Aligned_cols=169 Identities=8% Similarity=0.006 Sum_probs=99.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccc---
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK--- 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg--- 76 (329)
..||+++|+|++++. |-.. +....++ .| ..|.+.||..++|++.+++++.+.+.+...+ ...|.
T Consensus 241 ~~~g~~vi~D~a~~~-g~~~--~~~~~~~--~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g---~~~~~~~~ 312 (465)
T 3e9k_A 241 QAKGCYVGFDLAHAV-GNVE--LYLHDWG--VDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVG---WFGHELST 312 (465)
T ss_dssp HHTTCEEEEECTTTT-TTSC--CCHHHHT--CCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCC---GGGBCHHH
T ss_pred HHcCCEEEEEhhhhc-CCcC--CchhhcC--CCEEEECcccccccCCCceEEEEEcHHHHhhcCCcccC---ccCCCCCc
Confidence 467999999999873 2221 1122223 45 2499976644678999999887654320000 00010
Q ss_pred -------hh-------h---hcc-HHHHHHHHh-hHH-----hH-HHHHHHHHHHHHHHHHHHHHhC------Cce----
Q psy7882 77 -------LK-------I---SDT-VRPHVQIKK-SVL-----ER-FVHTYVVGNFLLTHLSKLREEF------AIV---- 121 (329)
Q Consensus 77 -------~T-------~---agn-lA~aaala~-~il-----e~-le~v~~lG~~L~~gL~eL~~~~------p~v---- 121 (329)
.+ | +.+ +++++..+. +.+ ++ .++..++.+++.+.|+++...+ +.+
T Consensus 313 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~ 392 (465)
T 3e9k_A 313 RFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIIT 392 (465)
T ss_dssp HTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECS
T ss_pred ccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeC
Confidence 00 0 223 333333333 333 33 5667777777877777653111 111
Q ss_pred -eeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882 122 -GDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQ-PKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 122 -~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~P-PL~It~~t~eeId~~l~~~ 197 (329)
.+.++.|.++.+.+..+ ...+.+.|.++||++... .++++|+.| |+.. +++||+++++++
T Consensus 393 p~~~~~~g~~~~~~~~~~-----------~~~l~~~L~~~Gi~v~~~--~~~~iRis~~~~~~---t~edi~~~~~~l 454 (465)
T 3e9k_A 393 PSHVEERGCQLTITFSVP-----------NKDVFQELEKRGVVCDKR--NPNGIRVAPVPLYN---SFHDVYKFTNLL 454 (465)
T ss_dssp CSSGGGBCSCEEEEECCT-----------TCCHHHHHHTTTEECEEE--TTTEEEEBCCTTTC---CHHHHHHHHHHH
T ss_pred CCCHhhcccEEEEEecCC-----------HHHHHHHHHHCCEEEecC--CCCEEEEeCcccCC---CHHHHHHHHHHH
Confidence 12344688888887521 123778899999998753 368999999 8877 589999999985
No 149
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=98.22 E-value=1.5e-05 Score=75.09 Aligned_cols=171 Identities=13% Similarity=-0.040 Sum_probs=98.3
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc------
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA------ 74 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~------ 74 (329)
.+|+++|+||++. +|... +..+.+ .+| ..|.++++ .++|++++++++++.+.....+. ..+.
T Consensus 171 ~~~~~li~Dea~~-~g~~~--~~~~~~--~~d~~~~s~~K~~~~~-~g~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 243 (396)
T 2ch1_A 171 QHDCLLIVDAVAS-LCGVP--FYMDKW--EIDAVYTGAQKVLGAP-PGITPISISPKALDVIRNRRTKS-KVFYWDLLLL 243 (396)
T ss_dssp HTTCEEEEECTTT-BTTBC--CCTTTT--TCCEEECCCC-CCCCC-SSCEEEEECHHHHHHHHTCSSCC-SCGGGCHHHH
T ss_pred HcCCEEEEEcccc-ccCCc--cchhhc--CcCEEEEcCCccccCC-CCeEEEEECHHHHHhhhhccCcc-cceEechHHH
Confidence 5799999999987 65431 222222 357 23999887 37899999998887654200000 0000
Q ss_pred ---------cchh-hhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE--eeceeeEEE
Q psy7882 75 ---------HKLK-ISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR--GKGLMIGVD 134 (329)
Q Consensus 75 ---------hg~T-~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR--G~GLm~gIe 134 (329)
...+ ++.+ .+++++.+. +. +++ .++.+++.+++.+.|+++ ....+.... ..|.++.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~ 321 (396)
T 2ch1_A 244 GNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM--GLDIFVKDPRHRLPTVTGIM 321 (396)
T ss_dssp HHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH--TCCBSSCSGGGBCTTEEEEE
T ss_pred HHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC--CCeeccCCccccCCceEEEE
Confidence 0111 1223 333332222 22 222 567778888888888876 333222111 234567777
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHC-CceeeccC--CCCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882 135 LVQDKETKVPLNSRHMTHILDSCKEH-GLLLGRGG--LSGNTLTALQ-PKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 135 f~~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G--~~~nvIrl~P-PL~It~~t~eeId~~l~~~ 197 (329)
+..+. + ...+.+.|.++ ||++.++. ..++.+|+.+ +++. +++|++++++++
T Consensus 322 ~~~~~------~---~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~---~~e~i~~~~~~l 376 (396)
T 2ch1_A 322 IPKGV------D---WWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECS---TVQKIQFYLYGF 376 (396)
T ss_dssp CCTTC------C---HHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGC---SHHHHHHHHHHH
T ss_pred cCCCC------C---HHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcC---CHHHHHHHHHHH
Confidence 63210 1 34577888875 99998632 1357899998 6766 578999999985
No 150
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=98.22 E-value=1.6e-05 Score=75.20 Aligned_cols=174 Identities=13% Similarity=0.004 Sum_probs=100.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhh-------------
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIK------------- 66 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~------------- 66 (329)
..||+++|+||+++ +|.. .+..+.++ +| ..|.+.|+. ++|++++++++++.+....
T Consensus 163 ~~~~~~li~D~a~~-~~~~--~~~~~~~~--~d~~~~s~~K~l~g~~-g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~ 236 (416)
T 3isl_A 163 RTEDALFIVDAVAT-IGGC--EVKVDEWK--IDAAIGGTQKCLSVPS-GMAPITYNERVADVIAARKKVERGIATQADRA 236 (416)
T ss_dssp HHTTCEEEEECTTT-TTTS--CCCTTTTT--CSEEECCSSSTTCCCS-SEEEEEECHHHHHHHHTC--------------
T ss_pred HHcCCEEEEECCcc-ccCC--CcchhhcC--CCEEEecCccccCCCC-CeEEEEECHHHHHHhhccccccccccccccch
Confidence 46799999999987 2221 11222233 56 349998875 8999999999987765200
Q ss_pred -----hccC--------------CCCccchhhhcc--HHHHHHHHh--hH-HhH-HHHHHHHHHHHHHHHHHHHHhCCce
Q psy7882 67 -----YQIL--------------KTPAHKLKISDT--VRPHVQIKK--SV-LER-FVHTYVVGNFLLTHLSKLREEFAIV 121 (329)
Q Consensus 67 -----~~~~--------------~~~~hg~T~agn--lA~aaala~--~i-le~-le~v~~lG~~L~~gL~eL~~~~p~v 121 (329)
.... ......+|.+.. .++.++++. +. +++ .++..++.+++.+.|+++ .....
T Consensus 237 ~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~ 314 (416)
T 3isl_A 237 ALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM--GLRLF 314 (416)
T ss_dssp ----CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCBC
T ss_pred hccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCEec
Confidence 0000 000011111111 233333333 22 334 677888888888888874 23222
Q ss_pred ee-EEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHC-CceeeccC--CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 122 GD-VRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEH-GLLLGRGG--LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 122 ~~-VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G--~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.. -...|.++.+.+..+. + ...+.+.|.++ ||++.+.. ..++.+|+.++...+ ++++++++++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~------~---~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~--~~e~i~~~~~~l 383 (416)
T 3isl_A 315 GDDSCKMPVVTCVEIPGGI------D---GESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSC--RKENVLFVLAGL 383 (416)
T ss_dssp SCGGGBCTTEEEEECCTTC------C---HHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGC--SHHHHHHHHHHH
T ss_pred cCccccCCcEEEEeCCCCC------C---HHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCC--cHHHHHHHHHHH
Confidence 11 1223667777774211 1 34688888887 99998632 246799999855543 345599999985
No 151
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=98.20 E-value=9.7e-07 Score=81.72 Aligned_cols=161 Identities=6% Similarity=-0.036 Sum_probs=92.5
Q ss_pred ccccceEEehhHhhch--hccchhhhhcccC--CcchH-----HHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGS--GDNGTYLGFQCLQ--ICRFV-----QKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGf--GRTG~~fA~e~~G--V~PDi-----~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
.+||+++|+||+++|| |+++.. ....+ ..+|+ .|. ||...+|++++++++++.+.. .. ..+
T Consensus 174 ~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~~d~~~~s~~K~--g~~~~~g~l~~~~~~~~~~~~--~~----~~~ 243 (359)
T 1svv_A 174 KEHGLYLFLDGARLASALSSPVND--LTLADIARLTDMFYIGATKA--GGMFGEALIILNDALKPNARH--LI----KQR 243 (359)
T ss_dssp HHHTCEEEEECTTHHHHHTSTTCC--CCHHHHHHHCSEEEEECTTT--TCSSCEEEEECSGGGCTTHHH--HH----HHT
T ss_pred HHhCCEEEEEccchhhhhcCCCcc--hhhhhhhhcCCEEEEecccC--CCCCceEEEEEcccHHHHHHH--HH----hcC
Confidence 3579999999999877 454421 12212 24661 374 443456888889888776643 00 012
Q ss_pred chhhhcc----HHHHHHHHhhHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeece-eeEEEeecCCCCCCCCChHH
Q psy7882 76 KLKISDT----VRPHVQIKKSVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGL-MIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 76 g~T~agn----lA~aaala~~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GL-m~gIef~~d~~~~~p~~~~~ 149 (329)
+.+++.+ .+++++++.+.+++ .++.+++.++|.+.| +. .....+. ..|. ++.+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~-~~~~~~~---~~~~~~~~~~~~------------- 305 (359)
T 1svv_A 244 GALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGL-EA-CGIRLAW---PSASNQLFPILE------------- 305 (359)
T ss_dssp TCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHH-HH-TTCCBSS---CCSSSEECBEEE-------------
T ss_pred CcccccchhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh-cc-CCeEEcc---CCccceEEEEcC-------------
Confidence 2222212 22222233322333 667888888888888 43 2222221 1222 2222221
Q ss_pred HHHHHHHHHHC-CceeeccC-CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEH-GLLLGRGG-LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~-GVLl~~~G-~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+.+.|.++ ||++.... ...+.+|+.|++.. +++|++++++++
T Consensus 306 -~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l 351 (359)
T 1svv_A 306 -NTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWAT---EEKECHRFVEVL 351 (359)
T ss_dssp -HHHHHHHTTTEECEEEEEETTTEEEEEEECCTTC---CHHHHHHHHHHH
T ss_pred -HHHHHHHHHhcCEEEEecccCCCceEEEEccCcC---CHHHHHHHHHHH
Confidence 2477888888 99985421 13568999988876 589999999975
No 152
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=98.15 E-value=2.3e-05 Score=73.73 Aligned_cols=173 Identities=9% Similarity=0.026 Sum_probs=99.6
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhh-c--c-C-----
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKY-Q--I-L----- 70 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~-~--~-~----- 70 (329)
..+|+++|.||+++ +|... +..+.+ .+| ++|.++|+. ++|++++++++++.+..... . . .
T Consensus 161 ~~~~~~li~D~a~~-~g~~~--~~~~~~--~~d~~~~s~sK~~~~~~-g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~ 234 (392)
T 2z9v_A 161 SAHGAYLIVDAVSS-FGGMK--THPEDC--KADIYVTGPNKCLGAPP-GLTMMGVSERAWAKMKANPLAPRASMLSIVDW 234 (392)
T ss_dssp HHTTCEEEEECTTT-BTTBS--CCGGGG--TCSEEEECSSSTTCCCS-CCEEEEECHHHHHHHHTCTTSCCSSTTCSGGG
T ss_pred HHcCCeEEEEcccc-cCCcc--cccccc--cceEEEecCcccccCCC-ceeEEEECHHHHHHhhhccCCCCceeccHHHH
Confidence 35799999999997 33321 122222 367 359998863 77999999998876642000 0 0 0
Q ss_pred -CCC-ccch-hhhcc-HHHH---HHHHh--hH-HhH-HHHHHHHHHHHHHHHHHHHHhCCcee-e-EEeeceeeEEEeec
Q psy7882 71 -KTP-AHKL-KISDT-VRPH---VQIKK--SV-LER-FVHTYVVGNFLLTHLSKLREEFAIVG-D-VRGKGLMIGVDLVQ 137 (329)
Q Consensus 71 -~~~-~hg~-T~agn-lA~a---aala~--~i-le~-le~v~~lG~~L~~gL~eL~~~~p~v~-~-VRG~GLm~gIef~~ 137 (329)
... .... +.+.+ .+++ ++++. +. +++ .++.+++.+++.+.|+++ ...... . ....|.++.+.+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~ 312 (392)
T 2z9v_A 235 ENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM--GLSVWAASDSIASPTTTAVRTPD 312 (392)
T ss_dssp TTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCBSSSSGGGBCTTEEEEECCT
T ss_pred HhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc--CCeeccCCccccCCceEEEECCC
Confidence 000 0001 11223 3322 23332 11 333 667788888888888775 232221 1 01246677777632
Q ss_pred CCCCCCCCChHHHHHHHHHHHHC-CceeeccC--CCCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882 138 DKETKVPLNSRHMTHILDSCKEH-GLLLGRGG--LSGNTLTALQ-PKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 138 d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G--~~~nvIrl~P-PL~It~~t~eeId~~l~~~ 197 (329)
+. + ...+.+.|.++ ||++.+.. ...+.+|+.| ++.. +++|++++++++
T Consensus 313 ~~------~---~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~---~~~~i~~~~~~l 364 (392)
T 2z9v_A 313 GV------D---EKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTA---QPIYAIAALTAL 364 (392)
T ss_dssp TC------C---HHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGC---SHHHHHHHHHHH
T ss_pred CC------C---HHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCccccc---CHHHHHHHHHHH
Confidence 11 1 34578888887 99998742 1367899986 4344 589999999975
No 153
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=98.13 E-value=1e-05 Score=78.66 Aligned_cols=46 Identities=11% Similarity=-0.223 Sum_probs=34.1
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeec
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTS 55 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~ 55 (329)
..+|+++|+||+|+++|..+..+ +..+| +.|.++|...++|+++++
T Consensus 171 ~~~g~~livD~~~~~~g~~~~~~-----~~~~Di~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 171 REKGVALIVDNTFGMGGYLLRPL-----AWGAALVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp HHHTCEEEEECGGGGGGTSCCGG-----GGTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred HHcCCEEEEECCcccccccCCcc-----ccCCeEEEECCcccccCCCCcEEEEEEe
Confidence 35799999999998888765443 34588 459999844588877764
No 154
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=98.13 E-value=6.8e-06 Score=79.78 Aligned_cols=173 Identities=12% Similarity=-0.006 Sum_probs=93.2
Q ss_pred ccccceEEehhHhhchhccchhhhh----cccCCc-----------ch-----HHHhhcCCccccceeee-c-h-hHHHh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGF----QCLQIC-----------RF-----VQKDFKGSFWDKLIVHT-S-T-CTFEN 61 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~----e~~GV~-----------PD-----i~KaLgGG~~PigAv~~-~-~-eI~d~ 61 (329)
.+||++||.||++..-| .+|.. .+.|+. +| ++|++ | +|+|++++ + + ++++.
T Consensus 214 ~~~gi~li~De~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~--g-~~~Gg~~~~~d~~~l~~~ 287 (467)
T 1ax4_A 214 KQHGIFVVMDSARFCEN---AYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDP--L-LNIGGLVAIRDNEEIFTL 287 (467)
T ss_dssp HHHTCCEEEECTTHHHH---HHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTT--C-CSSCEEEEESSCHHHHHH
T ss_pred HHcCCEEEEEchhhhhc---chhccccccccCCCchhhhhhhhccccceEEEeccccC--C-CCcceEEEeCCHHHHHHH
Confidence 46899999999876311 11111 223332 34 34765 4 38876554 5 5 78876
Q ss_pred hhhhhhccCCCCccchhhhcc-HHHHH----HHHhhHHh--HHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEE
Q psy7882 62 FIKIKYQILKTPAHKLKISDT-VRPHV----QIKKSVLE--RFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVD 134 (329)
Q Consensus 62 ~~~~~~~~~~~~~hg~T~agn-lA~aa----ala~~ile--~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIe 134 (329)
+...... ..+..+++++ .++.+ +++. ..+ .+++..+.+++|.+.|++ ..++.+...+|.++++.+.
T Consensus 288 ~~~~~~~----~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~l~~~L~~--~~~~~~~~~~~~~~~~~~~ 360 (467)
T 1ax4_A 288 ARQRCVP----MEGFVTYGGLAGRDMAAMVQGLEE-GTEEEYLHYRIGQVKYLGDRLRE--AGIPIQYPTGGHAVFVDCK 360 (467)
T ss_dssp HHHHHHH----HTCSTTTTTCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHH--TTCCBCSSCCSSEEEEEST
T ss_pred HHhhccc----cccccccCCccchHHHHHHHHHHH-hhhhhHHHHHHHHHHHHHHHHHh--CCCCcccCCCceEEEEehh
Confidence 6431010 1112344444 33333 3332 112 144556777888888877 2344444455554443310
Q ss_pred -eecCCCCCCCCChHHHHHHHHHH-HHCCceeeccCC---------------CCCEEEEeCc-cccCcCCHHHHHHHHhc
Q psy7882 135 -LVQDKETKVPLNSRHMTHILDSC-KEHGLLLGRGGL---------------SGNTLTALQP-KLLNYWTDFVGTPCLDC 196 (329)
Q Consensus 135 -f~~d~~~~~p~~~~~~~~~~~~l-~e~GVLl~~~G~---------------~~nvIrl~PP-L~It~~t~eeId~~l~~ 196 (329)
+...-. ...+ -...+...| .++||.+.++|. ..+.+||.|| +++ |++|+++++++
T Consensus 361 ~~~~~~~-~~~~---~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~---t~e~i~~~~~~ 433 (467)
T 1ax4_A 361 KLVPQIP-GDQF---PAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVY---TNDHMDYIADA 433 (467)
T ss_dssp TTCTTSC-GGGC---HHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSS---CHHHHHHHHHH
T ss_pred hhccccc-cCCC---CHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccC---CHHHHHHHHHH
Confidence 000000 0001 245678888 889999987321 1279999999 434 68999999998
Q ss_pred c
Q psy7882 197 E 197 (329)
Q Consensus 197 ~ 197 (329)
+
T Consensus 434 l 434 (467)
T 1ax4_A 434 L 434 (467)
T ss_dssp H
T ss_pred H
Confidence 5
No 155
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=98.10 E-value=2e-05 Score=75.55 Aligned_cols=136 Identities=13% Similarity=-0.027 Sum_probs=74.7
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeech-hHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTST-CTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~-eI~d~~~~~~~~~~~~~~hg~ 77 (329)
..+|+++|+||+++++.. +. ..+..+| +.|.++|+..++ |++++++ ++++.+.. .. ..++.
T Consensus 171 ~~~~~~livD~~~~~~~~-~~-----~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~--~~----~~~g~ 238 (389)
T 3acz_A 171 HERGARLVVDATFTSPCF-LK-----PLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKF--YR----KDAGS 238 (389)
T ss_dssp HHHTCEEEEECTTTCTTT-CC-----GGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHH--HH----HHHCC
T ss_pred HHcCCEEEEECCCccccc-cC-----ccccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHH--HH----HhcCC
Confidence 357999999999986521 22 2234578 459999876687 8999998 88877653 10 01222
Q ss_pred hhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHH----------HhCCce----eeEEeeceeeEEEeecCCC
Q psy7882 78 KISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLR----------EEFAIV----GDVRGKGLMIGVDLVQDKE 140 (329)
Q Consensus 78 T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~----------~~~p~v----~~VRG~GLm~gIef~~d~~ 140 (329)
+ .+ .++.++++. +.+.. +++..+....+.+.|++.. ..+|.+ ...+|.|.|+++++..
T Consensus 239 ~--~~~~~~~~~~~~l~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~--- 313 (389)
T 3acz_A 239 L--MAPMDAFLCARGMKTLPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS--- 313 (389)
T ss_dssp C--CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---
T ss_pred C--CCHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC---
Confidence 2 23 444444444 33321 3334444444444444320 011110 0125778899999842
Q ss_pred CCCCCChHHHHHHHHHHHHCCceeec
Q psy7882 141 TKVPLNSRHMTHILDSCKEHGLLLGR 166 (329)
Q Consensus 141 ~~~p~~~~~~~~~~~~l~e~GVLl~~ 166 (329)
...+.+.+.+.|++...
T Consensus 314 ---------~~~~~~~l~~~~i~~~~ 330 (389)
T 3acz_A 314 ---------FEAAKKLMEHLKVCTLA 330 (389)
T ss_dssp ---------HHHHHHHHTTCSSSEEB
T ss_pred ---------HHHHHHHHHhCCCcEEC
Confidence 12244555567877755
No 156
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=98.06 E-value=1.4e-05 Score=78.10 Aligned_cols=155 Identities=14% Similarity=0.056 Sum_probs=85.9
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcC-CccccceeeechhHHH-hhhhhhhccCCCCccchhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKG-SFWDKLIVHTSTCTFE-NFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgG-G~~PigAv~~~~eI~d-~~~~~~~~~~~~~~hg~T~ 79 (329)
..+|+++|+||+++ +|.++....+|+... ++|.++| |.++.|+++++++.+. .+.. .. ..++.++
T Consensus 193 ~~~g~~livDe~~~----~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~--~~----~~~g~~~ 262 (414)
T 3ndn_A 193 HAAGAKVVLDNVFA----TPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQK--LM----RHTGPAM 262 (414)
T ss_dssp HHTTCEEEEECTTT----HHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHH--HH----HHHCCCC
T ss_pred HHcCCEEEEECCCc----ccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHH--HH----HHcCCCC
Confidence 35799999999987 333333345566444 5699988 5457899999988765 3331 00 1122222
Q ss_pred hccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE------------------EeeceeeEEEeecCC
Q psy7882 80 SDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV------------------RGKGLMIGVDLVQDK 139 (329)
Q Consensus 80 agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V------------------RG~GLm~gIef~~d~ 139 (329)
+ ..++..++.. +.++. +++..+..+++.+.|+ ++|.+..| ||.|.|++|++..+.
T Consensus 263 ~-~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~----~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~ 337 (414)
T 3ndn_A 263 S-AFNAWVLLKGLETLAIRVQHSNASAQRIAEFLN----GHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPE 337 (414)
T ss_dssp C-HHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH----TCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCG
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCc
Confidence 1 1444444444 33332 4445555555555554 34544443 778999999995310
Q ss_pred CCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCcc
Q psy7882 140 ETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPK 180 (329)
Q Consensus 140 ~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL 180 (329)
. .+.+...+++..|...++.+...+ ..++...|+.
T Consensus 338 ~----~~~~~~~~~~~~l~~~~~~~s~G~--~~sl~~~p~~ 372 (414)
T 3ndn_A 338 D----VAKQRAFEVLDKMRLIDISNNLGD--AKSLVTHPAT 372 (414)
T ss_dssp G----GHHHHHHHHHHHCSSSEECSCCSC--SSCEEECGGG
T ss_pred c----ccHHHHHHHHHhCccceEcCCCCC--CCceeeCccc
Confidence 0 001345667777766665554432 2344444443
No 157
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=98.06 E-value=1.9e-05 Score=76.43 Aligned_cols=175 Identities=13% Similarity=0.005 Sum_probs=97.8
Q ss_pred ccccceEEehhHhhc----------hhccchhhh--hcccCCcch---H-HHhhcCCccc-cceeee-chhHHHhhhhhh
Q psy7882 5 YYRDCGVVVSAVDFG----------SGDNGTYLG--FQCLQICRF---V-QKDFKGSFWD-KLIVHT-STCTFENFIKIK 66 (329)
Q Consensus 5 ~~~giLLI~DEVqTG----------fGRTG~~fA--~e~~GV~PD---i-~KaLgGG~~P-igAv~~-~~eI~d~~~~~~ 66 (329)
..||+++|.||++++ +.+.|..+. .+..+..+| + +|.+++ .| .|.+++ ++++++.+....
T Consensus 205 ~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~--~~~gG~~~~~~~~~~~~~~~~~ 282 (456)
T 2ez2_A 205 EAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCL--VNIGGFLCMNDDEMFSSAKELV 282 (456)
T ss_dssp HHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTC--CSSCEEEEESCHHHHHHHHHHH
T ss_pred HHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCC--CCceeEEEECCHHHHHHHHHHH
Confidence 457999999999985 345554321 012344478 2 355644 26 466666 578877654300
Q ss_pred hccCCCCccc-hhhhc-c-HHHHH-HHHh-hHH-hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeec--
Q psy7882 67 YQILKTPAHK-LKISD-T-VRPHV-QIKK-SVL-ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQ-- 137 (329)
Q Consensus 67 ~~~~~~~~hg-~T~ag-n-lA~aa-ala~-~il-e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~-- 137 (329)
.. .++ +++.+ + .++++ +++. +.+ ++ .++..++.+++.+.|+++ ..+.+... .|.++.+.+..
T Consensus 283 ~~-----~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~p~--~~~~~~~~~~~~~ 353 (456)
T 2ez2_A 283 VV-----YEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLKAA--GVPIVEPV--GGHAVFLDARRFC 353 (456)
T ss_dssp HH-----HTCCTTTTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT--TCCBCSSC--CSSEEEEEHHHHT
T ss_pred hh-----ccCcccccCcchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC--CCccccCC--CceEEEEEhHHhc
Confidence 00 011 12222 2 22222 3333 344 23 667788888888888774 33333322 25666666531
Q ss_pred CCCCCCCCChHH-HHHHHHHH-HHCCceeeccCC---------------CCCEEEEeCccc-cCcCCHHHHHHHHhcc
Q psy7882 138 DKETKVPLNSRH-MTHILDSC-KEHGLLLGRGGL---------------SGNTLTALQPKL-LNYWTDFVGTPCLDCE 197 (329)
Q Consensus 138 d~~~~~p~~~~~-~~~~~~~l-~e~GVLl~~~G~---------------~~nvIrl~PPL~-It~~t~eeId~~l~~~ 197 (329)
+... ..++ ...+...| .++||.+.++|. ..+.+||.+|+. + +++|++++++++
T Consensus 354 ~~~~----~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~---t~e~i~~~~~~l 424 (456)
T 2ez2_A 354 EHLT----QDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVY---TYAHMDVVADGI 424 (456)
T ss_dssp TTSC----GGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTC---CHHHHHHHHHHH
T ss_pred CCCC----hhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCC---CHHHHHHHHHHH
Confidence 1100 1123 45556777 588998654331 137899999985 3 689999999975
No 158
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=98.04 E-value=3.6e-05 Score=72.99 Aligned_cols=165 Identities=11% Similarity=0.003 Sum_probs=94.9
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg 76 (329)
..||+++|.||++..+...|.......+ .|| ++|.++ .| +.+|.+++++++.+.+.. ....
T Consensus 194 ~~~~~~li~De~~~~~~~~~~~~~~~~~--~~~~~i~~~s~SK~~~~~G-~RiG~~~~~~~~~~~l~~--------~~~~ 262 (385)
T 1b5p_A 194 VEHDFYLVSDEIYEHLLYEGEHFSPGRV--APEHTLTVNGAAKAFAMTG-WRIGYACGPKEVIKAMAS--------VSRQ 262 (385)
T ss_dssp HHTTCEEEEECTTTTCBSSSCCCCGGGT--CTTTEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHH--------HHHT
T ss_pred HHcCCEEEEEccchhcccCCCCCCHHHc--CCCCEEEEEechhhcCCcc-cceEEEEeCHHHHHHHHH--------HHhh
Confidence 3579999999999987544422222222 223 469987 56 489999999998887653 1111
Q ss_pred hhhhcc-HHH---HHHHH----h-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC
Q psy7882 77 LKISDT-VRP---HVQIK----K-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN 146 (329)
Q Consensus 77 ~T~agn-lA~---aaala----~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~ 146 (329)
.+++.+ ++. .++++ . +.+++ .++.++..+++.+.|+++ ...... ..-|.++-+.+... + .+
T Consensus 263 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~~~~~~~~~-~----~~ 333 (385)
T 1b5p_A 263 STTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL--GLKAVR--PSGAFYVLMDTSPI-A----PD 333 (385)
T ss_dssp TTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TCCBCC--CSBTTEEEEECTTT-C----SS
T ss_pred ccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC--CCeecC--CCeeEEEEEecCCC-C----CC
Confidence 233333 222 23342 1 22333 455666667777777664 222111 11234444454210 0 11
Q ss_pred hHHHHHHHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+...|.++||++.++.. ..+.+|+.-. .++++|++.++..
T Consensus 334 ---~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~-----~~~~~i~~~l~~l 378 (385)
T 1b5p_A 334 ---EVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA-----TSEENLRKALERF 378 (385)
T ss_dssp ---HHHHHHHHHHTTEECEESGGGTCTTEEEEECC-----SCHHHHHHHHHHG
T ss_pred ---HHHHHHHHHHCCeEEecccccCCCCeEEEEec-----CCHHHHHHHHHHH
Confidence 34577888899999987421 1468998743 2678999999875
No 159
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=98.03 E-value=2.9e-05 Score=76.55 Aligned_cols=172 Identities=6% Similarity=-0.131 Sum_probs=96.0
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCC----ccccceeeechhHHHhhhhhhhc-cCCCC-
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGS----FWDKLIVHTSTCTFENFIKIKYQ-ILKTP- 73 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG----~~PigAv~~~~eI~d~~~~~~~~-~~~~~- 73 (329)
..+|+++|+||++..+ .+|.. ....+| +| +.|.+++. ..++|++++++++++.+...... ....+
T Consensus 230 ~~~g~~li~Dea~~~~-~~g~~-~~~~~g--~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~ 305 (474)
T 1wyu_B 230 KEAGVQLYYDGANLNA-IMGWA-RPGDMG--FDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFY 305 (474)
T ss_dssp HHHTCEEEEEGGGGGG-TTTTC-CHHHHT--CSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEE
T ss_pred HHcCCEEEEeCchhhh-hccCC-CcccCC--CcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeE
Confidence 3579999999999532 23311 112223 67 35988632 24789999999887655310000 00000
Q ss_pred ------cc---chhhhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeecee--eEEE
Q psy7882 74 ------AH---KLKISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLM--IGVD 134 (329)
Q Consensus 74 ------~h---g~T~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm--~gIe 134 (329)
.| ..++.++ ++++++++. .. +++ .+++.++.++|.+.|+++ .+..+. +.+.+ +-+.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~--g~~~~~---~~~~~~~~~~~ 380 (474)
T 1wyu_B 306 LDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK--GYRVPY---DGPSMHEFVAQ 380 (474)
T ss_dssp EECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCBCSS---CSSCCSCEEEB
T ss_pred ecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CcEecC---CCCcceEEEEE
Confidence 00 1233355 555555544 22 222 566777888888888774 232211 11222 2233
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+ ... .....+.+.|.++||++..... ..+.+|+.|+... +++|+|++++++
T Consensus 381 ~-~~~--------~~~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~~~~~---t~e~id~~~~~L 434 (474)
T 1wyu_B 381 P-PEG--------FRALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETE---AKETLEAFAEAM 434 (474)
T ss_dssp C-STT--------CCHHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTS---CHHHHHHHHHHH
T ss_pred c-CCC--------CCHHHHHHHHHHCCccccccccccccCCEEEEEeecCC---CHHHHHHHHHHH
Confidence 3 110 0135688889999998632211 2578999988665 589999999985
No 160
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=98.02 E-value=2.3e-05 Score=72.40 Aligned_cols=160 Identities=12% Similarity=-0.031 Sum_probs=89.0
Q ss_pred ccccceEEehhHhhchhcc--chhhhhcccCC--cch-----HHHhhcCCccccc--eeeechhHHHhhhhhhhccCCCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDN--GTYLGFQCLQI--CRF-----VQKDFKGSFWDKL--IVHTSTCTFENFIKIKYQILKTP 73 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRT--G~~fA~e~~GV--~PD-----i~KaLgGG~~Pig--Av~~~~eI~d~~~~~~~~~~~~~ 73 (329)
..||+++|+||++..+... |. ....+++ ..| ++|. |. |+| ++++++++++.+......
T Consensus 170 ~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~~~d~~~~s~sK~---g~-~~G~g~~~~~~~~~~~~~~~~~~----- 238 (356)
T 1v72_A 170 KSSSLGLHMDGSRFANALVSLGC--SPAEMTWKAGVDALSFGATKN---GV-LAAEAIVLFNTSLATEMSYRRKR----- 238 (356)
T ss_dssp HHTTCEEEEEETTHHHHHHHHTC--CTTTTTGGGTCCEEEECCGGG---TC-SSCEEEEESSGGGHHHHHHHHHH-----
T ss_pred HHcCCeEEEEchhhHhHhccCCC--CHHHhhhhhcCCEEEEecccC---CC-cCccEEEEECHHHHhhHHHHhhc-----
Confidence 4679999999999755221 11 1112221 244 4698 33 887 666788888765430000
Q ss_pred ccchhhhcc-HHHHHHHH---hhHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCCCCCCCh
Q psy7882 74 AHKLKISDT-VRPHVQIK---KSVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKETKVPLNS 147 (329)
Q Consensus 74 ~hg~T~agn-lA~aaala---~~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~~~p~~~ 147 (329)
.+...+.. .+..++++ .+.+++ .++..++.++|.+.|+++ +.+.-+. ..+.++.+.+.
T Consensus 239 -~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~----------- 302 (356)
T 1v72_A 239 -AGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGL----GGVEVLGGTEANILFCRLD----------- 302 (356)
T ss_dssp -TTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTC----TTEEEESCCCSSEEEEEEC-----------
T ss_pred -cCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhC----CCcEEccCCCccEEEEEcC-----------
Confidence 11111112 23222222 122222 456677777777776543 2221111 12333334431
Q ss_pred HHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 148 RHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 148 ~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+.+.|.++||++.++....+.+|+.+++.+ +++|++++++++
T Consensus 303 ---~~~~~~l~~~gi~v~~g~~~~~~iRi~~~~~~---~~~~i~~~~~~l 346 (356)
T 1v72_A 303 ---SAMIDALLKAGFGFYHDRWGPNVVRFVTSFAT---TAEDVDHLLNQV 346 (356)
T ss_dssp ---HHHHHHHHHTTCBCBCSSSSTTEEEEECCTTC---CHHHHHHHHHHH
T ss_pred ---HHHHHHHHhcCeEEeccccCCCeEEEEecCCC---CHHHHHHHHHHH
Confidence 14778888999999864222589999988876 589999999975
No 161
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=98.00 E-value=2.7e-05 Score=77.06 Aligned_cols=176 Identities=8% Similarity=-0.034 Sum_probs=103.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCC-cch-----HHHhhcCCccccceeeechhH-HHhhhhhhhccCCCCc-cc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRF-----VQKDFKGSFWDKLIVHTSTCT-FENFIKIKYQILKTPA-HK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PD-----i~KaLgGG~~PigAv~~~~eI-~d~~~~~~~~~~~~~~-hg 76 (329)
..||++|++||++.|+...+. +.....|+ .+| ..|.+++++ ++|+++++++. ++.+.. .. .+. ++
T Consensus 285 ~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~p~-~~G~l~~~~~~~~~~~~~--~~---~yl~~~ 357 (497)
T 2qma_A 285 VKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQTI-SCGALLVNDKSNFKFLLH--HA---DYLNRE 357 (497)
T ss_dssp HHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCCCS-SCEEEEESCGGGGGGGCC-------------
T ss_pred HHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCCCc-ceEEEEEeCHHHHHHhcC--Cc---hhcCCc
Confidence 457999999999999987665 55555677 778 359999885 89999987654 333321 00 011 11
Q ss_pred hhhhc-------------c-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecC
Q psy7882 77 LKISD-------------T-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQD 138 (329)
Q Consensus 77 ~T~ag-------------n-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d 138 (329)
.+... . +++.++++. +-+++ +++..+++++|.+.|+++. .+..+... .+.++.+.+...
T Consensus 358 ~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~--~~~~v~f~~~~~ 434 (497)
T 2qma_A 358 HDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTND-QFELLAEP--SLSTVLFRATHE 434 (497)
T ss_dssp ------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCT-TEEECSCC--SSSEEEEEECCS
T ss_pred cccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEcCC--CceEEEEEEcCC
Confidence 11001 1 233333332 22333 6677888888888877531 11122222 345777777532
Q ss_pred CCCCCCCChHHHHHHHHHHHHCCceeeccCC--CCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882 139 KETKVPLNSRHMTHILDSCKEHGLLLGRGGL--SGNTLTALQ-PKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 139 ~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~--~~nvIrl~P-PL~It~~t~eeId~~l~~~ 197 (329)
.. . .......+...+.++|+++.+... ....+|+.. +... |++||+++++++
T Consensus 435 ~~---~-~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~---t~edi~~~~~~l 489 (497)
T 2qma_A 435 TA---D-LDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCL---TTSDFESLLSKI 489 (497)
T ss_dssp SS---C-HHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTC---CHHHHHHHHHHH
T ss_pred cc---C-HHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCC---CHHHHHHHHHHH
Confidence 10 0 013455678889999998764211 235899975 5544 589999999975
No 162
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=97.99 E-value=5.9e-05 Score=71.52 Aligned_cols=168 Identities=10% Similarity=0.010 Sum_probs=91.9
Q ss_pred ccccceEEehhHhh-chhccchhhhhcccCC--cch-----HHHhhcCCccccceeeec-hhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQI--CRF-----VQKDFKGSFWDKLIVHTS-TCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV--~PD-----i~KaLgGG~~PigAv~~~-~eI~d~~~~~~~~~~~~~~h 75 (329)
..||+++|+||+++ |+...| .+.+. ..| ++|+++|+ ..|.++++ +++.+.+.. . ..+
T Consensus 189 ~~~~~~li~Dea~~~g~~~~~-----~~~~~~~~~di~~~s~sK~l~g~--~~G~~~~~~~~~~~~~~~--~-----~~~ 254 (417)
T 3n0l_A 189 DEIGAYLFADIAHIAGLVVAG-----EHPSPFPYAHVVSSTTHKTLRGP--RGGIIMTNDEELAKKINS--A-----IFP 254 (417)
T ss_dssp HHHTCEEEEECTTTHHHHHTT-----SSCCCTTTCSEEEEESSTTTCSC--SCEEEEESCHHHHHHHHH--H-----HTT
T ss_pred HHcCCEEEEECccchhhhhcc-----cCCCccccceEEEeeCccccCCC--CeeEEEECCHHHHHHHhh--h-----hCC
Confidence 45799999999974 442222 12222 236 34999554 46888887 688877653 1 112
Q ss_pred chhhhcc-H---HHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh
Q psy7882 76 KLKISDT-V---RPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS 147 (329)
Q Consensus 76 g~T~agn-l---A~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~ 147 (329)
+.+.+.+ . ++++++.. +.+++ .+++.++.++|.+.|++. ....+.. ...+.++.+.+.... .
T Consensus 255 ~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~-~~~~~~~~~~~~~~~-----~-- 324 (417)
T 3n0l_A 255 GIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR--KFKLVSD-GTDNHLVLMSFLDRE-----F-- 324 (417)
T ss_dssp TTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT--TCEEGGG-SCSSSEEEEECTTSS-----S--
T ss_pred cccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC--CceeccC-CCCceEEEEEcccCC-----C--
Confidence 2222222 2 22222221 11222 556777777777777662 1111110 012334555553211 0
Q ss_pred HHHHHHHHHHHHCCceeeccC--------CCCCEEEEeCccccC-cCCHHHHHHHHhcc
Q psy7882 148 RHMTHILDSCKEHGLLLGRGG--------LSGNTLTALQPKLLN-YWTDFVGTPCLDCE 197 (329)
Q Consensus 148 ~~~~~~~~~l~e~GVLl~~~G--------~~~nvIrl~PPL~It-~~t~eeId~~l~~~ 197 (329)
....+.+.|.++||++.+.. ...+.+|+.++.+.+ ..+++||+++++++
T Consensus 325 -~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l 382 (417)
T 3n0l_A 325 -SGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYI 382 (417)
T ss_dssp -CHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHH
Confidence 13456777888999987532 123668998775432 34689999999985
No 163
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=97.99 E-value=1.8e-05 Score=73.93 Aligned_cols=175 Identities=6% Similarity=-0.082 Sum_probs=98.4
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HH--HhhcCCccccceeeec--hhHHHhhhhhhhccC----C
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQ--KDFKGSFWDKLIVHTS--TCTFENFIKIKYQIL----K 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~--KaLgGG~~PigAv~~~--~eI~d~~~~~~~~~~----~ 71 (329)
..+|+++|.||+++. |... ....++..+| ++ |.++.| +|+++++ +++++.+........ .
T Consensus 145 ~~~~~~li~D~a~~~-~~~~---~~~~~~~~~~i~~~s~s~~K~~~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (375)
T 2fnu_A 145 KKHSLSFLSDSSHAL-GSEY---QNKKVGGFALASVFSFHAIKPITTA---EGGAVVTNDSELHEKMKLFRSHGMLKKDF 217 (375)
T ss_dssp HHHTCEEEEECTTCT-TCEE---TTEETTSSSSEEEEECCTTSSSCCS---SCEEEEESCHHHHHHHHHHTBTTEEESSS
T ss_pred HHcCCEEEEECcccc-CCeE---CCeeccccCCeEEEeCCCCCCcccc---CceEEEeCCHHHHHHHHHHHhcCCccccc
Confidence 357999999999974 3321 1123444456 45 998654 6777764 667776543100000 0
Q ss_pred -C---Cccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCcee---eEEeeceeeEEEeecCCCC
Q psy7882 72 -T---PAHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVG---DVRGKGLMIGVDLVQDKET 141 (329)
Q Consensus 72 -~---~~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~---~VRG~GLm~gIef~~d~~~ 141 (329)
. ..++.+++.+ ++++.++.. +.+++ .++.+++.++|.+.|+++. ...... ..++.+.++.+.+....
T Consensus 218 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-- 294 (375)
T 2fnu_A 218 FEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNP-YFTPLHPLLKDKSSNHLYPILMHQKF-- 294 (375)
T ss_dssp SCEEESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCS-SEEESGGGCSSCCCCSCEEEEECGGG--
T ss_pred cccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CccccCCCCCCCcceEEEEEEeCccc--
Confidence 0 0122233444 666665544 44444 6777888888888776631 110111 11233455566664210
Q ss_pred CCCCChHHHHHHHHHHHHCCceeecc-CC----------------------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCKEHGLLLGRG-GL----------------------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~e~GVLl~~~-G~----------------------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
. .....+.+.|.++||.+... .+ ..+.+|+.+.... +++|++++++++
T Consensus 295 ---~--~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~---t~~~i~~~~~~l 365 (375)
T 2fnu_A 295 ---F--TCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANL---NLESVQNIAHSV 365 (375)
T ss_dssp ---G--GGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTC---CHHHHHHHHHHH
T ss_pred ---c--chHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCC---CHHHHHHHHHHH
Confidence 0 02456888889999998731 00 0157999877655 589999999985
No 164
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=97.98 E-value=3.3e-05 Score=73.56 Aligned_cols=166 Identities=10% Similarity=-0.108 Sum_probs=86.9
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
..+|+++|+||++++ |.. ........+| ++|. .|+ .++|++++++++.+.+.+...+. .....-.+.
T Consensus 190 ~~~~~~li~Dea~~~-~~~----~~~~~~~~~di~~~s~sK~-~g~-~g~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 261 (423)
T 3lvm_A 190 RARGIIYHVDATQSV-GKL----PIDLSQLKVDLMSFSGHKI-YGP-KGIGALYVRRKPRVRIEAQMHGG-GHERGMRSG 261 (423)
T ss_dssp HHHTCEEEEECTTTT-TTS----CCCTTTSCCSEEEEESTTT-TSC-SSCEEEEECBTTBCCCCCSSCSS-CTTTTTCCS
T ss_pred HHcCCEEEEEhhhhc-CCC----CcChhhcCCCEEEechHHh-cCC-CCeEEEEEeccccCCCCccccCC-cccccccCC
Confidence 457999999999874 221 2233344578 3494 444 36999999988765543200000 000000112
Q ss_pred hcc-HHHHHHHHh-hHH----hH-HHHHHHHHHHHHHHHHHHHHhCCceeeE----EeeceeeEEEeecCCCCCCCCChH
Q psy7882 80 SDT-VRPHVQIKK-SVL----ER-FVHTYVVGNFLLTHLSKLREEFAIVGDV----RGKGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 80 agn-lA~aaala~-~il----e~-le~v~~lG~~L~~gL~eL~~~~p~v~~V----RG~GLm~gIef~~d~~~~~p~~~~ 148 (329)
+.+ .++++..+. +.+ ++ .++.+++.++|.+.|++ .+.+.-+ .+.+.++.+.+.. . +
T Consensus 262 ~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~~~~~-~------~-- 328 (423)
T 3lvm_A 262 TLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKD----IEEVYLNGDLEHGAPNILNVSFNY-V------E-- 328 (423)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----STTEEEESCSTTBCTTEEEEEETT-S------C--
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCEEEeCCccccCCCeEEEEeCC-C------C--
Confidence 223 333332222 322 22 45566666666666643 3322211 1224566666621 1 1
Q ss_pred HHHHHHHHHHHCCceeeccCC---------------------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCKEHGLLLGRGGL---------------------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~e~GVLl~~~G~---------------------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|.+ +.+.+... ..+.+|+.+++.. +++|++++++++
T Consensus 329 -~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~---t~e~i~~~~~~l 392 (423)
T 3lvm_A 329 -GESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFT---TEEEIDYTIELV 392 (423)
T ss_dssp -HHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTC---CHHHHHHHHHHH
T ss_pred -HHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCC---CHHHHHHHHHHH
Confidence 2345555555 55554210 0378999998766 589999999985
No 165
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=97.98 E-value=2.3e-05 Score=73.70 Aligned_cols=172 Identities=6% Similarity=-0.137 Sum_probs=93.4
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HH----HhhcC-Cccccceeeech-hHHHhhhhhhh-cc---CC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQ----KDFKG-SFWDKLIVHTST-CTFENFIKIKY-QI---LK 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~----KaLgG-G~~PigAv~~~~-eI~d~~~~~~~-~~---~~ 71 (329)
..+|+++|.||+++.. - .+..+.+|..+| ++ |++++ |. .|+++++. ++.+.+..... +. ..
T Consensus 148 ~~~~~~li~D~a~~~g-~---~~~~~~~~~~~d~~~~S~~~~K~l~~~g~--gg~~~~~~~~~~~~~~~~~~~g~~~~~~ 221 (373)
T 3frk_A 148 KKYNLKLIEDAAQAHG-S---LYKGMKVGSLGDAAGFSFYPAKNLGSLGD--GGAVVTNDKDLAEKIKALSNYGSEKKYH 221 (373)
T ss_dssp HHHTCEEEEECTTCTT-C---EETTEETTSSSSEEEEECCTTSSSCCSSS--CEEEEESCHHHHHHHHHHHBTTCSBTTB
T ss_pred HHcCCEEEEECCcccC-C---EECCEeccccccEEEEeCcCCCccCccce--eEEEEeCCHHHHHHHHHHHhcCcccCCc
Confidence 3579999999999722 1 133456676678 34 99988 63 56666654 56655442001 10 01
Q ss_pred CCccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCcee-eEEeeceeeEEEeecCCCCCCCCCh
Q psy7882 72 TPAHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVG-DVRGKGLMIGVDLVQDKETKVPLNS 147 (329)
Q Consensus 72 ~~~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~GLm~gIef~~d~~~~~p~~~ 147 (329)
....|.++..+ ++++.++.. +.+++ .++.+++.+++.+.|+++.-..+... .....-..+.+...
T Consensus 222 ~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 290 (373)
T 3frk_A 222 HIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRSE----------- 290 (373)
T ss_dssp CCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEES-----------
T ss_pred cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEeC-----------
Confidence 12234455555 666665554 44444 56677777777776654310011000 01111112222221
Q ss_pred HHHHHHHHHHHHCCceeeccCC--C-----------------------CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 148 RHMTHILDSCKEHGLLLGRGGL--S-----------------------GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 148 ~~~~~~~~~l~e~GVLl~~~G~--~-----------------------~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
-...+.+.|.++||.+++..+ . ..++|+.... ..|++|||.+++++
T Consensus 291 -~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~---~~t~~di~~~~~~l 361 (373)
T 3frk_A 291 -KRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWY---GMKNEEIEYVIDKI 361 (373)
T ss_dssp -SHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCT---TCCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCC---CCCHHHHHHHHHHH
Confidence 134688889999999874310 0 0466663222 34789999999985
No 166
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=97.96 E-value=0.00013 Score=67.78 Aligned_cols=163 Identities=9% Similarity=-0.077 Sum_probs=94.4
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc------
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA------ 74 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~------ 74 (329)
.||+++|.||++..+.+.-. ...+ | +.|.++.. .+|.+++++++.+.+.. .. ....
T Consensus 164 ~~~~~li~D~a~~~~~~~~~---~~~~----di~~~s~sK~~~~~--G~G~~~~~~~~~~~~~~--~~--~~~~~~~~~~ 230 (360)
T 1w23_A 164 INHAPLIADMSSDILSRPLK---VNQF----GMIYAGAQKNLGPS--GVTVVIVKKDLLNTKVE--QV--PTMLQYATHI 230 (360)
T ss_dssp CCSSCEEEECTTTTTSSCCC---GGGC----SEEEEETTTTTSCT--TCEEEEEEHHHHCSCCT--TC--CGGGCHHHHH
T ss_pred cCCceEEEechhhcCCCCcC---cccC----CEEEEEcccccCCC--CcEEEEEcHHHHhhccc--CC--cchhhhhhhh
Confidence 68999999999986543211 1222 6 45988632 47889999888765432 00 0000
Q ss_pred -cchhhhc-c-H---HHHHHHHh--h--HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE---E-e-eceeeEEEeecC
Q psy7882 75 -HKLKISD-T-V---RPHVQIKK--S--VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV---R-G-KGLMIGVDLVQD 138 (329)
Q Consensus 75 -hg~T~ag-n-l---A~aaala~--~--ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V---R-G-~GLm~gIef~~d 138 (329)
++.+++. + . ++.++++. + -+++ .++.+++.+++.+.|+++ +.+..+ . + .|.++.+.+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~~- 305 (360)
T 1w23_A 231 KSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDES----NGFYVGHAEKGSRSLMNVTFNLRN- 305 (360)
T ss_dssp HTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTT----TTSSEESSCGGGBCSSEEEEECSS-
T ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc----cCcccccCCchhccCcEEEEEcCC-
Confidence 1222222 2 2 22233332 1 2333 556667777777777653 311011 1 1 25577777631
Q ss_pred CCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 139 KETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 139 ~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
......+.+.|.++||.+.+.....+.+|+.+.... +++|++++++++
T Consensus 306 --------~~~~~~~~~~l~~~gi~~~~~~~~~~~iRis~~~~~---~~~~i~~~~~~l 353 (360)
T 1w23_A 306 --------EELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAV---PIDACIALRELM 353 (360)
T ss_dssp --------HHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTS---CHHHHHHHHHHH
T ss_pred --------CccHHHHHHHHHHCCeeeecCCCCCCeEEEEecCCC---CHHHHHHHHHHH
Confidence 122456778899999998764323578999987655 589999999875
No 167
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=97.96 E-value=4e-05 Score=71.01 Aligned_cols=165 Identities=12% Similarity=0.035 Sum_probs=90.1
Q ss_pred ccccceEEehhHhhchhc---cchhhhhcccCCcch-----HHHhhcCCccccce-eeechhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGD---NGTYLGFQCLQICRF-----VQKDFKGSFWDKLI-VHTSTCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGR---TG~~fA~e~~GV~PD-----i~KaLgGG~~PigA-v~~~~eI~d~~~~~~~~~~~~~~h 75 (329)
..||+++|+||.+. ++- .|. ....++...| ++|++++ |+|+ +++++++.+.+.. .. ..+
T Consensus 163 ~~~~~~li~D~a~~-~~~~~~~~~--~~~~~~~~~d~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~--~~----~~~ 230 (347)
T 1jg8_A 163 KEHGINVHIDGARI-FNASIASGV--PVKEYAGYADSVMFCLSKGLCA---PVGSVVVGDRDFIERARK--AR----KML 230 (347)
T ss_dssp HHHTCEEEEEETTH-HHHHHHHCC--CHHHHHHTCSEEEEESSSTTCC---SSCEEEEECHHHHHHHHH--HH----HHH
T ss_pred HHCCCEEEeehhhh-hcchhhcCC--ChHHhcccccEEEEecccccCC---CceEEEEcCHHHHHHHHH--HH----HHc
Confidence 35799999999764 321 111 0000101123 5699864 5774 5567777765432 00 011
Q ss_pred chhhhcc-HHHHHHHHh-hH-HhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 76 KLKISDT-VRPHVQIKK-SV-LERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 76 g~T~agn-lA~aaala~-~i-le~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
++++..+ +++++++.. +. .+.+.+..+..+++.+.|+++ ...... ....|.++.+++.... . ....
T Consensus 231 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~-~~~~~~~~~~~~~~~~-----~---~~~~ 299 (347)
T 1jg8_A 231 GGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEI--GYSVNP-EDVKTNMVILRTDNLK-----V---NAHG 299 (347)
T ss_dssp TCCCSSTHHHHHHHHHHHHHSSTTHHHHHHHHHHHHHHHHHH--TCBCCG-GGCCSSEEEEECTTSS-----S---CHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--Cceecc-CCCcceEEEEEccccc-----C---CHHH
Confidence 2222222 333322222 11 112444555667788878765 222111 1123556667763211 0 1345
Q ss_pred HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.+.|.++||++.+.+ .+.+|+.+++.+ +++|++++++++
T Consensus 300 ~~~~l~~~gi~v~~~~--~~~iRl~~~~~~---~~e~i~~~~~~l 339 (347)
T 1jg8_A 300 FIEALRNSGVLANAVS--DTEIRLVTHKDV---SRNDIEEALNIF 339 (347)
T ss_dssp HHHHHHHHTEECEEEE--TTEEEEECCTTS---CHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEecCC--CCeEEEEeCCCC---CHHHHHHHHHHH
Confidence 8888889999998754 578999887766 589999999875
No 168
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=97.95 E-value=2.4e-05 Score=73.68 Aligned_cols=143 Identities=10% Similarity=-0.037 Sum_probs=83.7
Q ss_pred ccccceEEehhHhh-chhccchhhhhcccCCcch---H----HHhhcC-Cccccceeee-chhHHHhhhhhh-hccCCC-
Q psy7882 5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF---V----QKDFKG-SFWDKLIVHT-STCTFENFIKIK-YQILKT- 72 (329)
Q Consensus 5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD---i----~KaLgG-G~~PigAv~~-~~eI~d~~~~~~-~~~~~~- 72 (329)
.++|+++|.||+|+ |+...|. ..+.-+| + .|.+++ |. .|++++ ++++++.+.... .+....
T Consensus 147 ~~~~~~li~D~a~~~g~~~~~~-----~~~~~~di~~~Sf~~~K~l~~~g~--gg~~~~~~~~l~~~~~~~~~~g~~~~~ 219 (367)
T 3nyt_A 147 SKYGIPVIEDAAQSFGASYKGK-----RSCNLSTVACTSFFPSAPLGCYGD--GGAIFTNDDELATAIRQIARHGQDRRY 219 (367)
T ss_dssp HHTTCCBEEECTTTTTCEETTE-----ETTSSSSEEEEECCTTSSSCCSSC--CEEEEESCHHHHHHHHHHTBTTEEETT
T ss_pred HHcCCEEEEECccccCCeECCe-----eccCCCCEEEEECCCCCcCCCcCc--eeEEEeCCHHHHHHHHHHHhcCCCcCc
Confidence 45799999999997 4543333 2333348 2 399988 74 666766 467776654300 000000
Q ss_pred --Cccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCcee-eEEeeceeeEEEeecCCCCCCCCC
Q psy7882 73 --PAHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVG-DVRGKGLMIGVDLVQDKETKVPLN 146 (329)
Q Consensus 73 --~~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~GLm~gIef~~d~~~~~p~~ 146 (329)
...|.++..+ ++++++++. +.+++ .++.+++.+++.+.|+++--..+... .......++.+.+. +
T Consensus 220 ~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------- 290 (367)
T 3nyt_A 220 HHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMD-N-------- 290 (367)
T ss_dssp EECSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECS-S--------
T ss_pred eeeccCcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeC-C--------
Confidence 1224567777 777777766 55555 67788888899888887621112111 11222223333332 1
Q ss_pred hHHHHHHHHHHHHCCceeec
Q psy7882 147 SRHMTHILDSCKEHGLLLGR 166 (329)
Q Consensus 147 ~~~~~~~~~~l~e~GVLl~~ 166 (329)
...+.+.|.++||.+++
T Consensus 291 ---~~~l~~~L~~~GI~~~~ 307 (367)
T 3nyt_A 291 ---RESVQASLKAAGVPTAV 307 (367)
T ss_dssp ---HHHHHHHHHHHTCCCBC
T ss_pred ---HHHHHHHHHHCCCceec
Confidence 34588889999998875
No 169
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=97.95 E-value=2.1e-05 Score=76.30 Aligned_cols=89 Identities=12% Similarity=0.050 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeec--CCCCCCCCChHH-HHHHHHHH-HHCCceeeccCC---
Q psy7882 97 FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQ--DKETKVPLNSRH-MTHILDSC-KEHGLLLGRGGL--- 169 (329)
Q Consensus 97 le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~--d~~~~~p~~~~~-~~~~~~~l-~e~GVLl~~~G~--- 169 (329)
+++..+++++|.+.|+++ .++.+ ..+ |.++.+.+.. +... ..++ ...+...| .++||++.+.+.
T Consensus 327 ~~~~~~~~~~l~~~L~~~--~~~~~-~~~--~~~~~~~~~~~~~~~~----~~~~~~~~l~~~L~~~~gv~~~~~~~~~~ 397 (467)
T 2oqx_A 327 LAYRIAQVQYLVDGLEEI--GVVCQ-QAG--GHAAFVDAGKLLPHIP----ADQFPAQALACELYKVAGIRAVEIGSFLL 397 (467)
T ss_dssp HHHHHHHHHHHHHHHHHT--TCCEE-EEC--SSCEEEEHHHHSTTSC----GGGCHHHHHHHHHHHHHCEECEEESHHHH
T ss_pred HHHHHHHHHHHHHHHHHC--CCeee-cCC--ceEEEEechhhcccCC----cccccHHHHHHHHHHhcCceecccccccc
Confidence 566778889999999886 45555 444 4445555531 1100 0122 45678888 889999987441
Q ss_pred ------------CCCEEEEeCccc-cCcCCHHHHHHHHhcc
Q psy7882 170 ------------SGNTLTALQPKL-LNYWTDFVGTPCLDCE 197 (329)
Q Consensus 170 ------------~~nvIrl~PPL~-It~~t~eeId~~l~~~ 197 (329)
..+.+||.|++. + +++||+++++++
T Consensus 398 ~~~~~~g~~~~~~~~~iRl~~~~~~~---t~e~i~~~~~~l 435 (467)
T 2oqx_A 398 GRDPKTGKQLPCPAELLRLTIPRATY---TQTHMDFIIEAF 435 (467)
T ss_dssp CBCTTTCSBCCCSCCEEEECCCTTTS---CHHHHHHHHHHH
T ss_pred cccccccccccCccCeEEEEecCCCC---CHHHHHHHHHHH
Confidence 127999999987 6 589999999975
No 170
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=97.95 E-value=3.5e-05 Score=74.14 Aligned_cols=173 Identities=11% Similarity=-0.026 Sum_probs=95.3
Q ss_pred ccccceEEehhHhh-chhccchhhhhcccCCcch-----HH--HhhcCCccccceeeec-hhHHHhhhhhhh-ccCCCC-
Q psy7882 5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF-----VQ--KDFKGSFWDKLIVHTS-TCTFENFIKIKY-QILKTP- 73 (329)
Q Consensus 5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD-----i~--KaLgGG~~PigAv~~~-~eI~d~~~~~~~-~~~~~~- 73 (329)
..+|+++|.||+++ |+...|.. .+.-+| ++ |+++|| .+|.++++ +++.+.+..... .....+
T Consensus 162 ~~~~~~li~Dea~~~g~~~~~~~-----~~~~~di~~~S~sk~K~l~~~--~~G~~v~~~~~l~~~l~~~~~~~~~~~~~ 234 (424)
T 2po3_A 162 DEHGLRLYFDAAHALGCAVDGRP-----AGSLGDAEVFSFHATKAVNAF--EGGAVVTDDADLAARIRALHNFGFDLPGG 234 (424)
T ss_dssp HHTTCEEEEECTTCTTCEETTEE-----TTSSSSEEEEECCTTSSSCCS--SCEEEEESCHHHHHHHHHHHBTTTTCTTC
T ss_pred HHcCCEEEEECccccCCeECCee-----cccccCEEEEeCCCCCCccCC--CCeEEEeCCHHHHHHHHHHHhcCcccccc
Confidence 35799999999999 88766532 233367 33 999874 68888888 788776653101 100000
Q ss_pred --ccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceee---EEe-e--ceeeEEEeecCCCCC
Q psy7882 74 --AHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGD---VRG-K--GLMIGVDLVQDKETK 142 (329)
Q Consensus 74 --~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~---VRG-~--GLm~gIef~~d~~~~ 142 (329)
.++.++..+ +++++++.. +.+++ .++..++.++|.+.|++ .+.+.- ..| . ..++.+.+.....
T Consensus 235 ~~~~g~~~~~~~~~aa~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~~~~~~~~~~~~i~~~~~~~-- 308 (424)
T 2po3_A 235 SPAGGTNAKMSEAAAAMGLTSLDAFPEVIDRNRRNHAAYREHLAD----LPGVLVADHDRHGLNNHQYVIVEIDEATT-- 308 (424)
T ss_dssp CTTCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS----CTTEEECCGGGGSCCCCCCEEEEECHHHH--
T ss_pred ccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----CCCccccCCCCCCccccEEEEEEECCccc--
Confidence 122233334 666666554 44443 55566666666666543 222211 112 1 2566666642000
Q ss_pred CCCChHHHHHHHHHHHHCCceeecc-CCC---------------CCE-------EEEeCccccCcCCHHHHHHHHhcc
Q psy7882 143 VPLNSRHMTHILDSCKEHGLLLGRG-GLS---------------GNT-------LTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 143 ~p~~~~~~~~~~~~l~e~GVLl~~~-G~~---------------~nv-------Irl~PPL~It~~t~eeId~~l~~~ 197 (329)
.. -...+.+.|.++||++.+. +.. ++. +++...... +++|++++++++
T Consensus 309 -~~---~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~---t~e~i~~~~~~L 379 (424)
T 2po3_A 309 -GI---HRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAI---GDDDIRRVADLL 379 (424)
T ss_dssp -SS---CHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTC---CHHHHHHHHHHH
T ss_pred -hh---hHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCC---CHHHHHHHHHHH
Confidence 00 1345778888999998762 100 011 444322333 689999999975
No 171
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=97.90 E-value=9.6e-05 Score=67.97 Aligned_cols=152 Identities=8% Similarity=-0.008 Sum_probs=90.7
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcc-h-----HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICR-F-----VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~P-D-----i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
+++ +|+||++.+|+..+... ....+ + ++|.++ .| +.+|.+++++++.+.+.. . ..++
T Consensus 164 ~~~-~ivDea~~~~~~~~~~~----~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~l~~--------~--~~~~ 227 (337)
T 3p1t_A 164 AGK-LLIDETYVDYSSFRARG----LAYGENELVFRSFSKSYGLAG-LRLGALFGPSELIAAMKR--------K--QWFC 227 (337)
T ss_dssp CSE-EEEECTTGGGSSCSSSC----CCCBTTEEEEEESSSTTCCTT-TCCEEEECCHHHHHHHHT--------T--SCTT
T ss_pred CCc-EEEECCChhhccccccc----cccCCCEEEEeeCchhccCcc-hheEEEEeCHHHHHHHHh--------h--cCCC
Confidence 455 55699999886554211 11111 2 469997 77 489999999999887753 1 1122
Q ss_pred hcc-H---HHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882 80 SDT-V---RPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI 153 (329)
Q Consensus 80 agn-l---A~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~ 153 (329)
+.+ + +++++++. +.+++ .++..+..+++.+.|+++ +. .-....|.++.+.+.. ...+
T Consensus 228 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~-~~~~~~~~~~~~~~~~------------~~~~ 290 (337)
T 3p1t_A 228 NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL----GY-RVASSEANFVLVENAA------------GERT 290 (337)
T ss_dssp CSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT----TC-CBCCCSSSEEEEECTT------------THHH
T ss_pred CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC----cC-EECCCCCeEEEEEcCC------------HHHH
Confidence 333 2 33334443 33333 455555556666666554 22 2233456666655421 1246
Q ss_pred HHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 154 LDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 154 ~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+.|.++||++.++.. .++.+|+... +++|++++++++
T Consensus 291 ~~~l~~~gi~v~~g~~~~~~~~iRis~~------~~~~~~~l~~al 330 (337)
T 3p1t_A 291 LRFLRERGIQVKDAGQFGLHHHIRISIG------REEDNDRLLAAL 330 (337)
T ss_dssp HHHHHHTTEECEEGGGGTCCSEEEEECC------CHHHHHHHHHHH
T ss_pred HHHHHHCCeEEEECccCCCCCeEEEecC------CHHHHHHHHHHH
Confidence 6778899999987532 2478998743 578999999875
No 172
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=97.88 E-value=3.6e-05 Score=71.73 Aligned_cols=165 Identities=11% Similarity=-0.068 Sum_probs=91.1
Q ss_pred ccc--ceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhH--HHhhhhhhhccCCCCccc
Q psy7882 6 YRD--CGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCT--FENFIKIKYQILKTPAHK 76 (329)
Q Consensus 6 ~~g--iLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI--~d~~~~~~~~~~~~~~hg 76 (329)
.+| +++|+||+++ +|... +..+. ..+| ++|.++ ...+|++++++++ ...+.. .. .....
T Consensus 167 ~~~~~~~li~Dea~~-~~~~~--~~~~~--~~~di~~~s~sK~~g--~~G~G~~~~~~~~~~~~~~~~--~~---~~~~~ 234 (384)
T 1eg5_A 167 KKNKETLVHVDAVQT-IGKIP--FSLEK--LEVDYASFSAHKFHG--PKGVGITYIRKGVPIRPLIHG--GG---QERGL 234 (384)
T ss_dssp HHCTTCEEEEECTTT-TTTSC--CCCTT--TCCSEEEEEGGGGTS--CTTCEEEEECTTSCCCCSBCS--SC---TTTTT
T ss_pred hcCCceEEEEEhhhh-cCCcc--cCchh--cCCCEEEecHHHhcC--CCceEEEEEcCCCcccccccc--Cc---ccccc
Confidence 467 9999999997 65431 12222 2467 459643 2127889988875 211110 00 00011
Q ss_pred hhhhcc-HHHHHHHHh-hH----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChH
Q psy7882 77 LKISDT-VRPHVQIKK-SV----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 77 ~T~agn-lA~aaala~-~i----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~ 148 (329)
.+++.+ .+++++.+. +. +++ .++.+++.++|.+.|++. ....+....| .+.+..+.+.. . +
T Consensus 235 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~-~------~-- 303 (384)
T 1eg5_A 235 RSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNL--GAHIITPLEISLPNTLSVSFPN-I------R-- 303 (384)
T ss_dssp BCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTT--TCEECSCTTSBCTTEEEEECTT-C------C--
T ss_pred cCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCC--CeEEeCCcccCCCCEEEEEeCC-C------C--
Confidence 233444 444433333 22 222 566777777777777651 1111111111 45666666631 1 1
Q ss_pred HHHHHHHHHHHCCceeeccC---C------------------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 149 HMTHILDSCKEHGLLLGRGG---L------------------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 149 ~~~~~~~~l~e~GVLl~~~G---~------------------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|.++||++.+.. . ..+.+|+.+.... +++|++++++++
T Consensus 304 -~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l 369 (384)
T 1eg5_A 304 -GSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYN---TEEEVDYFLKKI 369 (384)
T ss_dssp -HHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTC---CHHHHHHHHHHH
T ss_pred -HHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCC---CHHHHHHHHHHH
Confidence 2457788889999998721 1 0368999987655 589999999985
No 173
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=97.81 E-value=0.00036 Score=64.31 Aligned_cols=168 Identities=9% Similarity=-0.137 Sum_probs=94.0
Q ss_pred ccccc-cceEEehhHhhchhccchhhhhcccCCc-ch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC-CCC-
Q psy7882 3 TTYYR-DCGVVVSAVDFGSGDNGTYLGFQCLQIC-RF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL-KTP- 73 (329)
Q Consensus 3 ~~~~~-giLLI~DEVqTGfGRTG~~fA~e~~GV~-PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~-~~~- 73 (329)
+-..| |+++|.||++..+... ..+. .| ..|.++|+. .+|.+.+++++.+.+.....+.. ...
T Consensus 155 la~~~p~~~li~D~a~~~~~~~--------~~~~~~d~~~~s~~K~~~~~~-G~g~~~~~~~~~~~~~~~~~gg~~~~~~ 225 (362)
T 3ffr_A 155 FRDKNKDALIFVDAVSSLPYPK--------FDWTKIDSVFFSVQKCFGLPA-GLGVWILNDRVIEKSKALLAKRKSIGTY 225 (362)
T ss_dssp SGGGSTTSEEEEECTTTTTSSC--------CCTTSCSEEEEETTSTTCCCS-CCEEEEEEHHHHHHHHHHHHTTCCCCST
T ss_pred HHHhCCCCEEEEecccccCCcc--------cChhHCcEEEEecccccCCCC-ceEEEEECHHHHHHhhhccccCCCCccc
Confidence 44577 9999999997633221 1111 56 459998542 56888899988876653111000 000
Q ss_pred cc----------ch-hhhcc-H---HHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-----Eeece
Q psy7882 74 AH----------KL-KISDT-V---RPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-----RGKGL 129 (329)
Q Consensus 74 ~h----------g~-T~agn-l---A~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-----RG~GL 129 (329)
.. +. .++.+ . ++.++++. +-+++ .++..++.+++.+.|+++ |.+.-+ ...+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~ 301 (362)
T 3ffr_A 226 HTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESS----KVFSFGVEDAKLRSMT 301 (362)
T ss_dssp TSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC----SSEEESSSCGGGBCSS
T ss_pred ccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc----cCceeccCChhhcCCc
Confidence 00 00 11222 2 22233321 00222 556666677777766543 322111 11345
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccC--CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 130 MIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG--LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 130 m~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G--~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
++.+.+.. ....+.+.|.++||.+.+.. ..++.+|+.+.... +++|++++++++
T Consensus 302 ~~~~~~~~-----------~~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~~~---~~e~i~~l~~~l 357 (362)
T 3ffr_A 302 TIVANTTM-----------LPGEINKILEPFDMAVGAGYGSKKETQIRIANFPAH---SLEQVHKLVQTL 357 (362)
T ss_dssp EEEEEESS-----------CHHHHHHHHGGGTEEEEECSGGGTTTEEEEECCTTS---CHHHHHHHHHHH
T ss_pred eEEEecCC-----------CHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence 55666532 13468888999999998631 13678999987644 689999999875
No 174
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=97.77 E-value=0.00011 Score=70.99 Aligned_cols=51 Identities=6% Similarity=-0.138 Sum_probs=37.2
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHH-hhh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFE-NFI 63 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d-~~~ 63 (329)
+|+++|.||+++.+... ..+ + +| .| ++|.+++...++ |.+++++++.+ .+.
T Consensus 177 ~~~~li~De~~~~~~~~-~~~--~-~~--~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~ 234 (404)
T 1e5e_A 177 EGVLVIADNTFCSPMIT-NPV--D-FG--VDVVVHSATKYINGHTDVVAGLICGKADLLQQIRM 234 (404)
T ss_dssp TTCEEEEECTTTCTTTC-CGG--G-GT--CSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHH
T ss_pred cCCEEEEECCCchhhhC-Ccc--c-cC--CEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHH
Confidence 89999999999977532 111 1 33 55 569998755687 99999998877 565
No 175
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=97.75 E-value=0.00017 Score=69.68 Aligned_cols=53 Identities=13% Similarity=-0.083 Sum_probs=36.0
Q ss_pred cccc-ceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcC-Cccccceeeec-hhHHHhhh
Q psy7882 5 YYRD-CGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKG-SFWDKLIVHTS-TCTFENFI 63 (329)
Q Consensus 5 ~~~g-iLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgG-G~~PigAv~~~-~eI~d~~~ 63 (329)
..+| +++|+||+++++.. +. .....+| +.|.++| |...+|+++++ +++.+.+.
T Consensus 178 ~~~g~~~livD~~~~~~~~-~~-----~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~ 238 (403)
T 3cog_A 178 HKHGDIILVVDNTFMSPYF-QR-----PLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLR 238 (403)
T ss_dssp TSSSCCEEEEECTTTCTTT-CC-----TTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHH
T ss_pred HHcCCCEEEEECCCccccc-CC-----ccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHH
Confidence 3578 99999999987632 11 2234577 4699986 32357888885 67777665
No 176
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=97.73 E-value=0.00078 Score=63.97 Aligned_cols=167 Identities=14% Similarity=0.051 Sum_probs=94.5
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhc-c-CCCCc-----
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQ-I-LKTPA----- 74 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~-~-~~~~~----- 74 (329)
+|+++|.||++..+.+.-. .+ .+| ..|.++.+. -+|.+++++++.+.+...... . ..++.
T Consensus 191 ~~~~vivD~a~~~~~~~~~---~~----~~di~~~s~sK~~~~~g-g~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 262 (398)
T 2fyf_A 191 DDALVVIDATSGAGGLPVD---IA----ETDAYYFAPQKNFASDG-GLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIA 262 (398)
T ss_dssp C-CEEEEECTTTTTTSCCC---GG----GCSEEEECTTSTTCSCS-SEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHH
T ss_pred cCCeEEEEeccccCCcccC---cc----cCcEEEEecCcccCCCC-ceEEEEECHHHHHHhhcccccCCCCCcEEehHHH
Confidence 7999999999986543211 11 257 359988762 378888999887765310000 0 00000
Q ss_pred -----cchhhh-cc-H---HHHHHHHh--hH--HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE---E--eeceeeEEE
Q psy7882 75 -----HKLKIS-DT-V---RPHVQIKK--SV--LER-FVHTYVVGNFLLTHLSKLREEFAIVGDV---R--GKGLMIGVD 134 (329)
Q Consensus 75 -----hg~T~a-gn-l---A~aaala~--~i--le~-le~v~~lG~~L~~gL~eL~~~~p~v~~V---R--G~GLm~gIe 134 (329)
++.+++ .+ . ++.++++. +. +++ .++.+++.+++.+.|+++ +.+.-+ . ..+.++.+.
T Consensus 263 ~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~ 338 (398)
T 2fyf_A 263 VENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQER----PYTTPFVTDPGLRSQVVGTID 338 (398)
T ss_dssp HHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHS----TTEEESCCSGGGBCSSEEEEE
T ss_pred hhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHc----CCceeccCChhhcCCcEEEEE
Confidence 112222 22 2 23333332 11 333 566777777777777654 211111 1 124477777
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHCCceeeccC--CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG--LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G--~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+..+ .+ ...+.+.|.++||.+.+.. ..++.+|+.+.... +++|++++++++
T Consensus 339 ~~~~------~~---~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~---t~e~i~~~~~~l 391 (398)
T 2fyf_A 339 FVDD------VD---AGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAV---EPDDVSALTECV 391 (398)
T ss_dssp ECTT------SC---HHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTS---CHHHHHHHHHHH
T ss_pred CCCC------CC---HHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCC---CHHHHHHHHHHH
Confidence 7321 01 3468888999999997631 12478999987655 589999999975
No 177
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=97.73 E-value=1.2e-05 Score=76.66 Aligned_cols=160 Identities=9% Similarity=-0.065 Sum_probs=85.4
Q ss_pred ccccceEEehhHhhchhccc---hhhhhccc-CCcc---h------HHHhhcC-Cccccceee--e-----chh----HH
Q psy7882 5 YYRDCGVVVSAVDFGSGDNG---TYLGFQCL-QICR---F------VQKDFKG-SFWDKLIVH--T-----STC----TF 59 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG---~~fA~e~~-GV~P---D------i~KaLgG-G~~PigAv~--~-----~~e----I~ 59 (329)
..||+++|.||++.+|+..| .......+ ...+ + ++|.++. | +++|.++ + +++ +.
T Consensus 206 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-lriG~~~~~~~~~~~~~~~~~~l~ 284 (412)
T 1yaa_A 206 ASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYG-ERVGCFHLALTKQAQNKTIKPAVT 284 (412)
T ss_dssp HHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGG-GCEEEEEEECCSCTTHHHHHHHHH
T ss_pred HHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcC-CcceEEEEEecCCCCCHHHHHHHH
Confidence 35799999999999997655 22233221 1233 3 4699988 7 4899887 6 566 66
Q ss_pred HhhhhhhhccCCCCccchhhhcc-HHHH---HHHHh-h-------HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe
Q psy7882 60 ENFIKIKYQILKTPAHKLKISDT-VRPH---VQIKK-S-------VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG 126 (329)
Q Consensus 60 d~~~~~~~~~~~~~~hg~T~agn-lA~a---aala~-~-------ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG 126 (329)
+.+.. .....+.+.+ ++++ ++++. + .+++ .+++++..+++.+.|+++-... .+.-+..
T Consensus 285 ~~l~~--------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~ 355 (412)
T 1yaa_A 285 SQLAK--------IIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPG-NWDHIVN 355 (412)
T ss_dssp HHHHH--------HHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-CCTHHHH
T ss_pred HHHHH--------HHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-Ceeeecc
Confidence 55442 0111112223 3333 33332 2 1222 4556667777777776642100 0111112
Q ss_pred e-ceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 127 K-GLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 127 ~-GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
. |++.-+.+ +. ..+...+.++||++.+ .+|+.+.. . +++|++++++++
T Consensus 356 ~~~~~~~~~~----------~~---~~~~~~l~~~gi~v~~------~~Ris~~~-~---~~~~i~~~~~~l 404 (412)
T 1yaa_A 356 QCGMFSFTGL----------TP---QMVKRLEETHAVYLVA------SGRASIAG-L---NQGNVEYVAKAI 404 (412)
T ss_dssp CCSSEEECCC----------CH---HHHHHHHHHHCEECCT------TSEEEGGG-C---CTTTHHHHHHHH
T ss_pred CceEEEeeCC----------CH---HHHHHHHHhCCEEecc------CcEEEEcc-C---CHhHHHHHHHHH
Confidence 2 33221111 11 2344455578999875 25787763 2 467888888875
No 178
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=97.70 E-value=0.00016 Score=69.01 Aligned_cols=157 Identities=12% Similarity=-0.009 Sum_probs=85.0
Q ss_pred ccccceEEehhHhh-chhccchhhhhcccCCcch---H--HHhhcCCccccceeeec-hhHHHhhhhhhhccC---CC--
Q psy7882 5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF---V--QKDFKGSFWDKLIVHTS-TCTFENFIKIKYQIL---KT-- 72 (329)
Q Consensus 5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD---i--~KaLgGG~~PigAv~~~-~eI~d~~~~~~~~~~---~~-- 72 (329)
..+|+++|.||+++ |+...|.... .++ ..| + .|+++|+ -+|+++++ +++++.+........ ..
T Consensus 146 ~~~~~~li~Dea~~~g~~~~~~~~~--~~~-~~~~~s~s~~K~l~~~--~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 220 (394)
T 1o69_A 146 KENDIVLIEDAAEALGSFYKNKALG--TFG-EFGVYSYNGNKIITTS--GGGMLIGKNKEKIEKARFYSTQARENCLHYE 220 (394)
T ss_dssp HHTTCEEEEECTTCTTCEETTEETT--SSS-SEEEEECCTTSSSCCS--SCEEEEESCHHHHHHHHHHTBTCCCSSSSCC
T ss_pred HHcCCEEEEECcCcccceeCCcccc--ccc-CcEEEEEeCCccCCCC--CceEEEECCHHHHHHHHHHHHhccccCcccc
Confidence 35799999999999 8765553211 111 255 3 5988865 48889995 788777653101100 00
Q ss_pred -Cccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeece-eeEEEeecCCCCCC----
Q psy7882 73 -PAHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGL-MIGVDLVQDKETKV---- 143 (329)
Q Consensus 73 -~~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GL-m~gIef~~d~~~~~---- 143 (329)
...|.++... ++++.++.. +.+++ .++.+++.+++.+.|+++ -+.....+.+..+. ++.+.+..+...+.
T Consensus 221 ~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 299 (394)
T 1o69_A 221 HLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTALINFDKNELNACQK 299 (394)
T ss_dssp CSSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEEEESCCGGGSCCCCE
T ss_pred ccccCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEEEecchhhccccccc
Confidence 0112222233 666666555 55555 778888888998888765 21111101111122 45566642100000
Q ss_pred ----CC----ChHHHHHHHHHHHHCCceeecc
Q psy7882 144 ----PL----NSRHMTHILDSCKEHGLLLGRG 167 (329)
Q Consensus 144 ----p~----~~~~~~~~~~~l~e~GVLl~~~ 167 (329)
.+ .......+.+.|.++||.+++.
T Consensus 300 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~ 331 (394)
T 1o69_A 300 DINISQKNITLHPKISKLIEDLKNKQIETRPL 331 (394)
T ss_dssp EEECCCCCCCCCHHHHHHHHHHHHTTCCCBCC
T ss_pred cccccccccccccCHHHHHHHHHHcCCccccc
Confidence 00 0012456888899999998764
No 179
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=97.69 E-value=0.0003 Score=65.56 Aligned_cols=167 Identities=13% Similarity=0.045 Sum_probs=91.5
Q ss_pred cceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHH-hhhhh-------------hh-
Q psy7882 8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFE-NFIKI-------------KY- 67 (329)
Q Consensus 8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d-~~~~~-------------~~- 67 (329)
|+++|.||+++ +|.. .+..+.+ .+| +.|.++|+. ++|++++++++++ .+... ..
T Consensus 169 ~~~li~D~a~~-~~~~--~~~~~~~--~~d~~~~s~~K~~~~~~-G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 242 (385)
T 2bkw_A 169 ETFFVVDAVCS-IGCE--EFEFDEW--GVDFALTASQKAIGAPA-GLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWT 242 (385)
T ss_dssp TSEEEEECTTT-TTTS--CCCTTTT--TCSEEEEESSSTTCCCS-CEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHH
T ss_pred CCEEEEECccc-cCCc--ccccccc--CceEEEecCccccccCC-cceEEEEcHHHHHHHHhhccCCCCCceeecHHHHh
Confidence 89999999997 3322 1222223 367 359998763 6799999988876 43100 00
Q ss_pred ccCCCCc--cchh-hhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHH-HHHHHhCCcee-eE-E-eeceeeE
Q psy7882 68 QILKTPA--HKLK-ISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHL-SKLREEFAIVG-DV-R-GKGLMIG 132 (329)
Q Consensus 68 ~~~~~~~--hg~T-~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL-~eL~~~~p~v~-~V-R-G~GLm~g 132 (329)
.....+. .+.+ ++.+ .+++++.+. +. +++ .++.+++.+++.+.| +++ ....+. +- . ..|.++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--g~~~~~~~~~~~~~~~~~~ 320 (385)
T 2bkw_A 243 PIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGL--QLTSVSRYPSNMSAHGLTA 320 (385)
T ss_dssp HHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT--CCEESSCSSSTTBCSSCEE
T ss_pred hHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhc--CceecccCcccccCCceEE
Confidence 0000000 0011 1233 333332222 22 222 566777777777777 553 111111 00 0 2466777
Q ss_pred EEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC---CCCEEEEe-Cc---cccCcCCHHHHHHHHhcc
Q psy7882 133 VDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL---SGNTLTAL-QP---KLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 133 Ief~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~---~~nvIrl~-PP---L~It~~t~eeId~~l~~~ 197 (329)
+.+.. ...+.+.|.++||.+.+... ..+.+|+. -+ +.. +++|++++++++
T Consensus 321 ~~~~~------------~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~---~~e~i~~~~~~l 377 (385)
T 2bkw_A 321 VYVAD------------PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNK---NLPYMKNCFDLI 377 (385)
T ss_dssp EECSC------------HHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSST---TCTHHHHHHHHH
T ss_pred EecCC------------HHHHHHHHHHCCeEEeCCCCcccCCCEEEEEccccccccC---CHHHHHHHHHHH
Confidence 76631 34578888899999987421 25789988 33 223 468999999875
No 180
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=97.66 E-value=5.5e-05 Score=75.07 Aligned_cols=51 Identities=10% Similarity=-0.070 Sum_probs=35.2
Q ss_pred ccccceEEehhHhhchhccchhh-hhcccCCcch-----HHHhhcC--Cccccceeeech-hHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQICRF-----VQKDFKG--SFWDKLIVHTST-CTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~GV~PD-----i~KaLgG--G~~PigAv~~~~-eI~d~~~ 63 (329)
..||+++|+||+++. |..+ ..+ + .+| ++|.++| | +++|++++++ ++.+.+.
T Consensus 244 ~~~gi~livDea~~~----g~~~~~~~-~--~~div~~S~sK~~~g~~G-l~~G~l~~~~~~l~~~l~ 303 (464)
T 1ibj_A 244 HAQGALVLVDNSIMS----PVLSRPLE-L--GADIVMHSATKFIAGHSD-VMAGVLAVKGEKLAKEVY 303 (464)
T ss_dssp HTTTCEEEEECTTTC----TTTCCGGG-T--TCSEEEEETTTTTTCSSC-CCCEEEEECSHHHHHHHH
T ss_pred HHcCCEEEEECCCcc----cccCChhh-c--CCEEEEECCcccccCCCC-CcEEEEEEChHHHHHHHH
Confidence 457999999999973 2221 122 3 367 4699987 6 4789999985 7777665
No 181
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=97.60 E-value=3.5e-05 Score=74.05 Aligned_cols=168 Identities=10% Similarity=-0.051 Sum_probs=84.8
Q ss_pred ccccceEEehhHhhchhccc--hhhhhccc-CCcch------HHHhhc-CCccccceeee---chhHHHhhhhhhhcc-C
Q psy7882 5 YYRDCGVVVSAVDFGSGDNG--TYLGFQCL-QICRF------VQKDFK-GSFWDKLIVHT---STCTFENFIKIKYQI-L 70 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG--~~fA~e~~-GV~PD------i~KaLg-GG~~PigAv~~---~~eI~d~~~~~~~~~-~ 70 (329)
..||+++|.||+..+|+..| ...+...+ +..++ ++|.++ .| +++|.+++ ++++++.+....... .
T Consensus 225 ~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~~~~~~~~~~~~~~~~~~~~~ 303 (420)
T 4f4e_A 225 KARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYG-ERVGALSIITDSKDEAARVLSQLKRVIR 303 (420)
T ss_dssp HHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGG-GCEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred HHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcC-CCcEEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 35799999999999997654 12222222 22232 569998 57 48988653 556555432100000 0
Q ss_pred CCCccchhhhccHHHHHHHHh-hH-------HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC
Q psy7882 71 KTPAHKLKISDTVRPHVQIKK-SV-------LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET 141 (329)
Q Consensus 71 ~~~~hg~T~agnlA~aaala~-~i-------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~ 141 (329)
....++++++. .+.++++.. .+ +++ .++.+++.++|.+.|+++....+........|++..+.+.
T Consensus 304 ~~~~~~~~~~~-~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~----- 377 (420)
T 4f4e_A 304 TNYSNPPTHGG-AIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLT----- 377 (420)
T ss_dssp TTTSSCCSHHH-HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCC-----
T ss_pred cccCCCCHHHH-HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCC-----
Confidence 00111111111 122222322 11 222 4556667777777776653211211111223444332221
Q ss_pred CCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+...+.++||++.+.+ |+.... + ++++|+++++++
T Consensus 378 --------~~~~~~~l~~~gI~v~~~~------Ris~~~-~---~~~~i~~~~~~l 415 (420)
T 4f4e_A 378 --------SAQVDRLREEFGIYAVSTG------RICVAA-L---NTRNLDVVANAI 415 (420)
T ss_dssp --------HHHHHHHHHHHCEECCTTS------EEEGGG-C---CTTTHHHHHHHH
T ss_pred --------HHHHHHHHHhCCEEecCCC------eEEEec-C---CHHHHHHHHHHH
Confidence 1235666778999998743 666542 2 356799998874
No 182
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=97.58 E-value=4.5e-05 Score=71.97 Aligned_cols=168 Identities=10% Similarity=-0.049 Sum_probs=84.7
Q ss_pred ccccceEEehhHhhchhccc--hhhhhccc-CCcch------HHHhhc-CCccccceeee---chhHHHhhhhhhhcc-C
Q psy7882 5 YYRDCGVVVSAVDFGSGDNG--TYLGFQCL-QICRF------VQKDFK-GSFWDKLIVHT---STCTFENFIKIKYQI-L 70 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG--~~fA~e~~-GV~PD------i~KaLg-GG~~PigAv~~---~~eI~d~~~~~~~~~-~ 70 (329)
..||+++|.||+..+|...+ ...+...+ +..++ ++|.++ .| +++|.+++ ..++.+.+....... .
T Consensus 203 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~ 281 (397)
T 3fsl_A 203 KARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYG-ERVGGLSVMCEDAEAAGRVLGQLKATVR 281 (397)
T ss_dssp HHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred HhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcC-CCeeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 35799999999999987642 22222222 12222 569998 67 48998864 455554332100000 0
Q ss_pred CCCccchhhhccHHHHHHHHh-h-------HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC
Q psy7882 71 KTPAHKLKISDTVRPHVQIKK-S-------VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET 141 (329)
Q Consensus 71 ~~~~hg~T~agnlA~aaala~-~-------ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~ 141 (329)
.....+++++.. ++++++.. . .+++ .+++++..++|.+.|+++....+.......-|++..+.+.
T Consensus 282 ~~~~~~~~~~~~-~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----- 355 (397)
T 3fsl_A 282 RNYSSPPNFGAQ-VVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS----- 355 (397)
T ss_dssp TTTSSCCSHHHH-HHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCC-----
T ss_pred hccCCCCHHHHH-HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCC-----
Confidence 011111222222 22222322 1 1222 4566777777777777653211111111123444333221
Q ss_pred CCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+...+.++||++.+.+ |+.... +++++|+++++++
T Consensus 356 --------~~~~~~~l~~~gi~v~~g~------Ris~~~----~~~~~i~~~~~~l 393 (397)
T 3fsl_A 356 --------AAQVDRLREEFGVYLIASG------RMCVAG----LNTANVQRVAKAF 393 (397)
T ss_dssp --------HHHHHHHHHTTCEECCTTC------EEEGGG----CCTTTHHHHHHHH
T ss_pred --------HHHHHHHHHhCCEEECCCC------eEEEEe----cCHhhHHHHHHHH
Confidence 1235667778999998742 665432 2456799998874
No 183
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=97.57 E-value=0.00031 Score=69.09 Aligned_cols=140 Identities=9% Similarity=-0.102 Sum_probs=84.4
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCcc-ccceeeechhHHHhhhhhhhccCCCCccchhhhcc
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFW-DKLIVHTSTCTFENFIKIKYQILKTPAHKLKISDT 82 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~-PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~agn 82 (329)
+|+++|+||++.++...+... .+|+... ++|.|+||+. |-|.+++++++.+.+............++.++..+
T Consensus 200 ~~~~livDea~~~~~~~~~~~---~~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~ 276 (431)
T 3ht4_A 200 PDVVVFVDNCYGEFIEEQEPC---HVGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSL 276 (431)
T ss_dssp TTCEEEEECTTCTTSSSCCGG---GTTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCS
T ss_pred CCCEEEEeCCChhhccCCCcc---ccCCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHH
Confidence 799999999999886544322 2243222 5699999764 44778888888887653101100001233444444
Q ss_pred HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHh-CCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHC
Q psy7882 83 VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREE-FAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEH 160 (329)
Q Consensus 83 lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~-~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~ 160 (329)
.++..++.. ... +++..+...++.+.|+++--+ +|. .+.++.++|++|++.+ .+...++++.+.+.
T Consensus 277 ~~~~~~l~~~~~~--~~~~~~~a~~l~~~L~~~g~~v~p~-~~~~~~~li~~i~l~~---------~~~~~~~~~~l~~~ 344 (431)
T 3ht4_A 277 QEMYQGFFLAPHV--AGQALKGAIFTAAFLEKLGMNTSPA-WNAPRTDLIQSVQFDD---------KDRMIAFCQAIQYA 344 (431)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHTCCEESC-TTSCCSSSCCEEECCC---------HHHHHHHHHHHHHT
T ss_pred HHHHhHhhhHHHH--HHHHHHHHHHHHHHHHhCcCEecCC-CCCCCccEEEEEEeCC---------HHHHHHHHHHHHhc
Confidence 334444443 211 566777888888888776211 222 3557888899999952 24566788888876
Q ss_pred C
Q psy7882 161 G 161 (329)
Q Consensus 161 G 161 (329)
.
T Consensus 345 ~ 345 (431)
T 3ht4_A 345 S 345 (431)
T ss_dssp S
T ss_pred C
Confidence 3
No 184
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=97.51 E-value=6.6e-05 Score=71.61 Aligned_cols=54 Identities=11% Similarity=-0.087 Sum_probs=36.9
Q ss_pred ccccceEEehhHhhchhccch---hhhhcc-cCCcch------HHHhhc-CCccccce---eeechhHH
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT---YLGFQC-LQICRF------VQKDFK-GSFWDKLI---VHTSTCTF 59 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~---~fA~e~-~GV~PD------i~KaLg-GG~~PigA---v~~~~eI~ 59 (329)
..||+++|.||+..+|+..+. .+.... .+..++ ++|.++ .| +.+|. +.+++++.
T Consensus 213 ~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~riG~~~~v~~~~~~~ 280 (409)
T 4eu1_A 213 KRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYG-HRCGALHISTASAEEA 280 (409)
T ss_dssp HHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGG-GCCEEEEEECSSHHHH
T ss_pred HhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCcc-CCceEEEEEeCCHHHH
Confidence 467999999999999977652 223322 355566 469997 56 48888 46677733
No 185
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=97.49 E-value=0.00018 Score=70.60 Aligned_cols=160 Identities=9% Similarity=-0.065 Sum_probs=83.2
Q ss_pred ccccceEEehhHhhchhc-cchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHH--hhhhhhhccCCCCccc
Q psy7882 5 YYRDCGVVVSAVDFGSGD-NGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFE--NFIKIKYQILKTPAHK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGR-TG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d--~~~~~~~~~~~~~~hg 76 (329)
..||+++|+||++++..+ .|..+....+| +| +.|.++|+. ++|++++++++.+ .+... ... +..+
T Consensus 172 ~~~~~~livDea~~~~~~f~~~~~~~~~~g--~Di~~~S~~K~l~~~~-g~g~l~~~~~~i~~~~~~~~-~~~---~~~~ 244 (446)
T 2x3l_A 172 HQLNIPVLIDEAHGAHFGLQGFPDSTLNYQ--ADYVVQSFHKTLPALT-MGSVLYIHKNAPYRENIIEY-LSY---FQTS 244 (446)
T ss_dssp HHTTCCEEEECTTCTTTTSTTSCCCGGGGT--CSEEEECHHHHSSSCT-TCEEEEEETTCTTHHHHHHH-HHH---HSCS
T ss_pred HhcCCeEEEcchhhhhhccCCCCCChHHcC--CCEEEECCcccccccc-ccEEEEEcCCcCCHHHHHHH-HHH---HcCC
Confidence 357999999999987222 22211222233 68 459988774 7899999888654 22210 000 1111
Q ss_pred h-hhhccHHHHHHHHhhHHhH------HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882 77 L-KISDTVRPHVQIKKSVLER------FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH 149 (329)
Q Consensus 77 ~-T~agnlA~aaala~~ile~------le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~ 149 (329)
+ .+....++.+++ +.+++ .++..++.+++++. ....+.. ..+..+.+.+. + . .
T Consensus 245 s~~~~~~aal~~a~--~~l~~~g~~~~~~~~~~l~~~l~~~------g~~~~~~--~~~~~l~i~~~-~------~---~ 304 (446)
T 2x3l_A 245 SPSYLIMASLESAA--QFYKTYDSTLFFAKRAQLIECLENK------GFEMLQV--DDPLKLLIKYE-G------F---T 304 (446)
T ss_dssp SCCHHHHHHHHHHH--HHHHHCCCHHHHHHHHHHHHHHHHH------TCEEEEC--SSTTEEEEECT-T------S---C
T ss_pred CchHHHHHHHHHHH--HHHHHhCHHHHHHHHHHHHHHHHHc------CCEECcC--CCCeEEEEEeC-C------c---C
Confidence 1 111112222222 22221 44555655555554 1111110 01223344432 1 0 1
Q ss_pred HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|.++||.+..++ .+.+|+.+++..+ ++|+ ++++++
T Consensus 305 ~~~l~~~L~~~GI~v~~~g--~~~iRi~~~~~~t---~e~i-~l~~aL 346 (446)
T 2x3l_A 305 GHDIQNWFMNAHIYLELAD--DYQALAILPLWHH---DDTY-LFDSLL 346 (446)
T ss_dssp HHHHHHHHHHTTEEESEEC--SSCEEEECCCCCT---TCCC-CHHHHH
T ss_pred HHHHHHHHHHCCCEEEecC--CCEEEEEeecCCC---HHHH-HHHHHH
Confidence 3457888999999997444 4689999987664 4667 777653
No 186
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=97.47 E-value=0.00066 Score=65.63 Aligned_cols=176 Identities=10% Similarity=-0.031 Sum_probs=91.5
Q ss_pred ccccceEEehhHhh-chhccchhhhhcccCCcchH-------HHhhcCCccccceeeechhHHHhhhhh--hhccC----
Q psy7882 5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRFV-------QKDFKGSFWDKLIVHTSTCTFENFIKI--KYQIL---- 70 (329)
Q Consensus 5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PDi-------~KaLgGG~~PigAv~~~~eI~d~~~~~--~~~~~---- 70 (329)
..+|+++|.||+++ |....| +.+|..+|+ +|+++||. .|+++++++........ .....
T Consensus 182 ~~~~~~li~D~a~~~g~~~~~-----~~~~~~~d~~~~s~~~~k~l~~g~--gg~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (437)
T 3bb8_A 182 DKYNLWLIEDCCDALGSTYDG-----KMAGTFGDIGTVSFYPAKHITMGE--GGAVFTQSAELKSIIESFRDWGRDCYCA 254 (437)
T ss_dssp HHHTCEEEEECTTCTTCEETT-----EETTSSSSEEEEECSTTSSSCCSS--CEEEEESCHHHHHHHHHHHBTTBCC---
T ss_pred HHcCCEEEEECccccCceECC-----eecccccCEEEEECcCCcCCCCCC--eEEEEeCCHHHHHHHHHHHHhCcccccc
Confidence 35799999999998 543322 345655783 48887763 57777775554432110 00000
Q ss_pred --------------------------CCCccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHH--hCC
Q psy7882 71 --------------------------KTPAHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLRE--EFA 119 (329)
Q Consensus 71 --------------------------~~~~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~--~~p 119 (329)
.....|.++..+ ++++++++. +.+++ +++.+++.+++.++|+++.. .+|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 334 (437)
T 3bb8_A 255 PGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLERIEEFVEKRKANFKYLKDALQSCADFIELP 334 (437)
T ss_dssp -------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTTTEECC
T ss_pred cccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccccC
Confidence 000112222334 666666665 44443 56667778888887766421 111
Q ss_pred ceeeEEeece-eeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCC--------------------------CC
Q psy7882 120 IVGDVRGKGL-MIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLS--------------------------GN 172 (329)
Q Consensus 120 ~v~~VRG~GL-m~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~--------------------------~n 172 (329)
....-+..+. .+.+.+..+.+ .....+.+.|.++||++++.... .+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 407 (437)
T 3bb8_A 335 EATENSDPSWFGFPITLKEDSG-------VSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQ 407 (437)
T ss_dssp CCCTTEECCCSSEEEEECGGGS-------SCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHH
T ss_pred CCCCCCceeeEEEEEEECCcCc-------CcHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcC
Confidence 1000011121 12233321100 01346888899999998764210 01
Q ss_pred EEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 173 TLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 173 vIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+++. + ....|++|||.+++++
T Consensus 408 ~lrl~--~-~~~~t~~di~~i~~~l 429 (437)
T 3bb8_A 408 TFWIG--I-YPGLTHDHLDYVVSKF 429 (437)
T ss_dssp EEEEC--C-STTCCHHHHHHHHHHH
T ss_pred EEEec--C-CCCCCHHHHHHHHHHH
Confidence 25552 2 2234789999999875
No 187
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=97.46 E-value=0.00018 Score=68.52 Aligned_cols=175 Identities=10% Similarity=0.013 Sum_probs=83.4
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI 79 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ 79 (329)
..||+++|.||++.-+ ..|...........+| ++|.++| ..+|.+++++++++.+.. .. ...+ .
T Consensus 169 ~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~di~~~S~sK~l~g--~~~G~~~~~~~~~~~l~~--~~----~~~~--~ 237 (374)
T 2aeu_A 169 KNKEAIVFVDDASGAR-VRLLFNQPPALKLGADLVVTSTDKLMEG--PRGGLLAGKKELVDKIYI--EG----TKFG--L 237 (374)
T ss_dssp HHHTCCEEEECTTHHH-HHHHTTCCCHHHHTCSEEEEETTSSSSS--CSCEEEEEEHHHHHHHHH--HH----HTTT--C
T ss_pred HHcCCEEEEECCcccc-cccccccCCccccCCcEEEecCcccccC--cceEEEEECHHHHHHHHH--hh----cccc--C
Confidence 4579999999965433 2111110001123467 4699875 378999999999887653 11 0011 1
Q ss_pred hcc-HHHHHHHHh-hHHh--HHHHHHHHHHHH----HHHHHHHHHhC----CceeeEEeeceeeEEEeecCCCCCCCCCh
Q psy7882 80 SDT-VRPHVQIKK-SVLE--RFVHTYVVGNFL----LTHLSKLREEF----AIVGDVRGKGLMIGVDLVQDKETKVPLNS 147 (329)
Q Consensus 80 agn-lA~aaala~-~ile--~le~v~~lG~~L----~~gL~eL~~~~----p~v~~VRG~GLm~gIef~~d~~~~~p~~~ 147 (329)
+.+ ++++++.+. +.++ ++++..+....+ ++.|++..... +.....+..|.++... .... ..+.
T Consensus 238 ~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~-~~~~----~~~~ 312 (374)
T 2aeu_A 238 EAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRV-YKDD----TINI 312 (374)
T ss_dssp BCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEE-ESSH----HHHH
T ss_pred CCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEee-cccc----cccc
Confidence 223 333333333 2221 122333333333 34444432221 2222345667665442 1100 0000
Q ss_pred HHHHHHH-HHHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 148 RHMTHIL-DSCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 148 ~~~~~~~-~~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.....+. ..+.++||++.++.. ..+.+||.++-.. .++.+++++++++
T Consensus 313 ~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~--~~~~~l~~l~~~l 364 (374)
T 2aeu_A 313 KKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRD--AERIDDNYIIKAI 364 (374)
T ss_dssp HHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGG--GGGSCHHHHHHHH
T ss_pred cchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCch--HHHHHHHHHHHHH
Confidence 0112244 444578999987521 2457999865311 1233477777764
No 188
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=97.46 E-value=0.00062 Score=64.37 Aligned_cols=144 Identities=8% Similarity=0.071 Sum_probs=78.6
Q ss_pred ccccceEEehhHhh-chhccchhhhhcccCCcch---HH----HhhcCCccccceeeech-hHHHhhhhhh-hcc-C---
Q psy7882 5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF---VQ----KDFKGSFWDKLIVHTST-CTFENFIKIK-YQI-L--- 70 (329)
Q Consensus 5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD---i~----KaLgGG~~PigAv~~~~-eI~d~~~~~~-~~~-~--- 70 (329)
..+|+++|.||+|+ |... ..+.+|+.+| ++ |.+++| ..|++++++ ++.+.+.... .+. .
T Consensus 152 ~~~~~~li~D~a~~~g~~~-----~~~~~g~~~~~~~~s~~~~k~~~~g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~ 224 (390)
T 3b8x_A 152 GGRDIILLEDNCESMGATF-----NNKCAGTFGLMGTFSSFYSNHIATM--EGGCIVTDDEEIYHILLCIRAHGWTRNLP 224 (390)
T ss_dssp TTSCCEEEEECTTCTTCEE-----TTEETTSSSSEEEEECCTTSSSCSS--SCEEEEESCHHHHHHHHHHTBTTBSTTSC
T ss_pred HHcCCEEEEECcCcccCEE-----CCcccccccceEEEEccCCCCCccC--CceEEEeCCHHHHHHHHHHHhcCCCcccc
Confidence 46799999999998 4432 2356788777 33 555443 236666665 5655443200 010 0
Q ss_pred ---------------CCC---ccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCcee--e--EE
Q psy7882 71 ---------------KTP---AHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVG--D--VR 125 (329)
Q Consensus 71 ---------------~~~---~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~--~--VR 125 (329)
..+ ..|.++..+ ++++++++. +.+++ .++.+++.+++.+.|+++ |.+. . .+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~ 300 (390)
T 3b8x_A 225 KKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQLKKLPRFISVRRKNAEYFLDKFKDH----PYLDVQQETGE 300 (390)
T ss_dssp SEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC----SSEEECCCCSB
T ss_pred ccccccccccccccccccceeccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCcccCCCCCC
Confidence 000 012333355 777777666 55555 667777788887777643 3211 0 11
Q ss_pred eeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeec
Q psy7882 126 GKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGR 166 (329)
Q Consensus 126 G~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~ 166 (329)
....++.|.+..+.+ .....+.+.|.++||.+++
T Consensus 301 ~~~~~~~i~~~~~~~-------~~~~~l~~~L~~~gI~v~~ 334 (390)
T 3b8x_A 301 SSWFGFSFIIKKDSG-------VIRKQLVENLNSAGIECRP 334 (390)
T ss_dssp CCCCEEEEEECTTSC-------CCHHHHHHHHHHTTBCCBC
T ss_pred cccEEEEEEecCcCc-------ccHHHHHHHHHHCCCCeee
Confidence 222334555532100 0134678888899998875
No 189
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=97.46 E-value=0.0004 Score=66.79 Aligned_cols=51 Identities=16% Similarity=-0.005 Sum_probs=36.2
Q ss_pred cceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeec-hhHHHhhhh
Q psy7882 8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTS-TCTFENFIK 64 (329)
Q Consensus 8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~-~eI~d~~~~ 64 (329)
|+++|+||+|+++.+. ..+. +| +| +.|.+++...++ |+++++ +++.+.+..
T Consensus 172 ~~~livD~a~~~~~~~-~~~~---~~--~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~ 229 (393)
T 1n8p_A 172 DVILVVDNTFLSPYIS-NPLN---FG--ADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQF 229 (393)
T ss_dssp TCEEEEECTTTHHHHC-CGGG---GT--CSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCccccccC-CHHH---cC--CeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHH
Confidence 9999999999987653 3322 23 67 469999754578 777775 678776653
No 190
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=97.45 E-value=0.00052 Score=63.67 Aligned_cols=172 Identities=8% Similarity=-0.110 Sum_probs=87.8
Q ss_pred ccccceEEehhHhhchhc--cchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882 5 YYRDCGVVVSAVDFGSGD--NGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGR--TG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~ 77 (329)
..||+++|+||.+..+.. .|.- ...+.-..| ++|+++++. . +.+++++++++.+..... ...+.
T Consensus 168 ~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~sK~~~~~~-g-g~~~~~~~l~~~~~~~~~-----~~~~~ 238 (359)
T 3pj0_A 168 HEQGISLHLDGARLWEITPFYQKS--AEEICALFDSVYVSFYKGIGGIA-G-AILAGNDDFVQEAKIWKR-----RYGGD 238 (359)
T ss_dssp HHHTCEEEEEETTCGGGHHHHTCC--HHHHHTTCSEEEEESSSTTCCSS-C-EEEEECHHHHHHHHHHHH-----HTTCC
T ss_pred HHcCCEEEEECcchhcchhhhCCC--HHHhhccCCEEEEeccccCCCcc-e-EEEECCHHHHHHHHHHHH-----HhCCC
Confidence 357999999998653211 1100 000111224 469887652 2 567788888887653000 11122
Q ss_pred hhhcc-HHHHH--HHHhhHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeE--EeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882 78 KISDT-VRPHV--QIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDV--RGKGLMIGVDLVQDKETKVPLNSRHMTH 152 (329)
Q Consensus 78 T~agn-lA~aa--ala~~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~V--RG~GLm~gIef~~d~~~~~p~~~~~~~~ 152 (329)
++..+ .++++ +++ +.++.+++..+..+++.+.|+++ +.+.-. ...+.++.+.+.... ......
T Consensus 239 ~~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 306 (359)
T 3pj0_A 239 LISLYPYILSADYYFE-KRIGKMAEYFEAAKGLAERFNSC----SGVKTVPEVPVSNMFHVYFENSA-------DEIGAI 306 (359)
T ss_dssp CSCCHHHHHHHHHHHH-HHGGGHHHHHHHHHHHHHHHHTS----TTEEEESSSCSSSEEEEEESSCH-------HHHHHH
T ss_pred cchhHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHhhC----CCceeeccCCcceEEEEEecCcc-------chhHHH
Confidence 33333 22222 222 22233556667777777777653 322111 123444445553210 122456
Q ss_pred HHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.+.|.++||++.+... ....+|+.--...+..+.+++++.++.+
T Consensus 307 l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l 355 (359)
T 3pj0_A 307 LTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCL 355 (359)
T ss_dssp HHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHH
T ss_pred HHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHH
Confidence 88899999999987521 1234555322112223688999888764
No 191
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=97.44 E-value=0.00055 Score=64.46 Aligned_cols=145 Identities=14% Similarity=0.002 Sum_probs=81.1
Q ss_pred ccccceEEehhHhh-chhccchhhhhcccCCcch-----HH--HhhcCCccccceeeechh-H--HHhhhh-hhhcc---
Q psy7882 5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF-----VQ--KDFKGSFWDKLIVHTSTC-T--FENFIK-IKYQI--- 69 (329)
Q Consensus 5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD-----i~--KaLgGG~~PigAv~~~~e-I--~d~~~~-~~~~~--- 69 (329)
.++|+++|.||+++ |+...|.. ...++ | ++ |+++|| ..|+++++++ + ++.+.. ...+.
T Consensus 150 ~~~~~~li~D~a~~~g~~~~~~~--~~~~~---~i~~~S~s~~K~l~g~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (388)
T 1b9h_A 150 ADTGVPLLQDAAHAHGARWQGKR--VGELD---SIATFSFQNGKLMTAG--EGGAVVFPDGETEKYETAFLRHSCGRPRD 222 (388)
T ss_dssp HHHTCCBCEECTTCTTCEETTEE--GGGSS---SCEEEECCTTSSSCSS--SCEEEEECTTCHHHHHHHHHHTBTTCCTT
T ss_pred HHcCCEEEEecchhcCCccCCee--ccccc---ceEEEEccCCCcccCC--CeEEEEECCHHHHHHHHHHHHHhCCCCcc
Confidence 35799999999998 45444432 22233 5 23 999886 4788888875 6 555432 00000
Q ss_pred CCCC---ccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-------EeeceeeEEEee
Q psy7882 70 LKTP---AHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-------RGKGLMIGVDLV 136 (329)
Q Consensus 70 ~~~~---~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-------RG~GLm~gIef~ 136 (329)
...+ ..|.++..+ ++++++.+. +.+++ .++.++..+++.+.|+++ |.+.-+ +..|.++.+.+.
T Consensus 223 ~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (388)
T 1b9h_A 223 DRRYFHKIAGSNMRLNEFSASVLRAQLARLDEQIAVRDERWTLLSRLLGAI----DGVVPQGGDVRADRNSHYMAMFRIP 298 (388)
T ss_dssp CSSCCCCSCCCBCBCBHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTS----TTCEECCCCTTCCBCCCSEEEEECT
T ss_pred CccceeecccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----CCccccCCCcCCCccceEEEEEEeC
Confidence 0001 113334445 555554444 55544 566777777777777653 322111 233667777774
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHCCceeecc
Q psy7882 137 QDKETKVPLNSRHMTHILDSCKEHGLLLGRG 167 (329)
Q Consensus 137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~ 167 (329)
.. ...-...+.+.|.++||.+.++
T Consensus 299 ~~-------~~~~~~~l~~~L~~~gI~v~~~ 322 (388)
T 1b9h_A 299 GL-------TEERRNALVDRLVEAGLPAFAA 322 (388)
T ss_dssp TC-------CHHHHHHHHHHHHHTTCCEEEC
T ss_pred Cc-------CcccHHHHHHHHHHCCCCcccc
Confidence 21 0112456888899999999763
No 192
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=97.38 E-value=0.00072 Score=62.78 Aligned_cols=174 Identities=9% Similarity=-0.130 Sum_probs=89.6
Q ss_pred ccccceEEehhHh-----hchhccchhhhhcccCC-cchHHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882 5 YYRDCGVVVSAVD-----FGSGDNGTYLGFQCLQI-CRFVQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 5 ~~~giLLI~DEVq-----TGfGRTG~~fA~e~~GV-~PDi~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
..||+++|+||.+ .++|++...+. +..++ .=.++|+++|.. -|.+++++++++.+..... ...++.
T Consensus 166 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~d~~~~s~sK~~~~~~--gg~~~~~~~~~~~~~~~~~-----~~~~~~ 237 (357)
T 3lws_A 166 RERGIRLHLDGARLFEMLPYYEKTAAEIA-GLFDSIYISFYKGLGGIA--GAILAGPAAFCQTARIWKR-----RYGGDL 237 (357)
T ss_dssp HHTTCEEEEEETTHHHHHHHHTCCHHHHH-TTSSEEEEESSSTTCCSS--CEEEEECHHHHHHHHHHHH-----HTTCCC
T ss_pred HHcCCEEEEECchhhhhhhhcCCChHHHH-hcCCEEEEeccccCCCCc--eEEEEcCHHHHHHHHHHHH-----HhcCCc
Confidence 3679999999864 34555543332 11111 111569986532 2777788888877642000 011122
Q ss_pred hhccHHHHHHHHh--hHHhHHHHHHHHHHHHHHHHHHHHHhCCceee--EEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882 79 ISDTVRPHVQIKK--SVLERFVHTYVVGNFLLTHLSKLREEFAIVGD--VRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154 (329)
Q Consensus 79 ~agnlA~aaala~--~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~--VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~ 154 (329)
+..+..++++++. +.++++.+..+..+++.+.|+++ +.+.- ....+.++.+.+.... ......+.
T Consensus 238 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 306 (357)
T 3lws_A 238 ISLYPYIVSADYYYELRKDRMGQYYEQAKQLAEQFNAL----PGVHTTPEVPVSNMFHLHFDGQA-------ADISPKLE 306 (357)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS----TTEEEESSSCSSSEEEEEEESCH-------HHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCCeeccCCCcceEEEEEecCCh-------HHHHHHHH
Confidence 2223212222222 22222445566667777766543 33221 1234556666764310 11245678
Q ss_pred HHHHHCCceeeccC---CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 155 DSCKEHGLLLGRGG---LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 155 ~~l~e~GVLl~~~G---~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.|.++||++.+.. +....+|+.--......+++++++.++.+
T Consensus 307 ~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l 352 (357)
T 3lws_A 307 QVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARL 352 (357)
T ss_dssp HHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHH
T ss_pred HHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHH
Confidence 88999999998742 11125555422222223688999988864
No 193
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=97.34 E-value=0.0014 Score=65.14 Aligned_cols=186 Identities=15% Similarity=0.025 Sum_probs=98.7
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCC-cch-----HHHhhcCCccccceeeechh--HHHhhhh--hhh--ccCCC
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRF-----VQKDFKGSFWDKLIVHTSTC--TFENFIK--IKY--QILKT 72 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PD-----i~KaLgGG~~PigAv~~~~e--I~d~~~~--~~~--~~~~~ 72 (329)
.++|++||+|+++.|+......+.+...|+ .+| ..|.+++++ ++|+++++++ +++.... ..+ +....
T Consensus 286 ~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~-g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~ 364 (515)
T 2jis_A 286 QRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGL-QCSALLLQDTSNLLKRCHGSQASYLFQQDKF 364 (515)
T ss_dssp HHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCS-CCEEEEESCCSCHHHHHHCC---------CC
T ss_pred HHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCC-CeeEEEEeChHHHHHHHhcCCchhccCCccc
Confidence 457999999999999877655444445566 678 259988774 8899999977 6553211 000 00000
Q ss_pred ---Cccchhh------hcc-HHHHHHHH---hhHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecC
Q psy7882 73 ---PAHKLKI------SDT-VRPHVQIK---KSVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQD 138 (329)
Q Consensus 73 ---~~hg~T~------agn-lA~aaala---~~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d 138 (329)
.....++ ... +++.++++ .+-+++ .++..++.++|.+.|+++ ..+..+...+ ...+.+.+.++
T Consensus 365 ~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~g~~~~~~~~--~~~v~f~~~p~ 441 (515)
T 2jis_A 365 YDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKR-EGFELVMEPE--FVNVCFWFVPP 441 (515)
T ss_dssp SCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-TTEEESSCCS--SSEEEEEECCG
T ss_pred ccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEeCCCC--eeEEEEEEeCc
Confidence 0001111 011 22222222 222333 667778888888887664 1111222211 22334433221
Q ss_pred C--C--CCCCCChH---HHHHHHHHHHHCCceeecc---CCCCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882 139 K--E--TKVPLNSR---HMTHILDSCKEHGLLLGRG---GLSGNTLTALQ-PKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 139 ~--~--~~~p~~~~---~~~~~~~~l~e~GVLl~~~---G~~~nvIrl~P-PL~It~~t~eeId~~l~~~ 197 (329)
. . ....+... ....+...+.++|++.... ....+.+|+.+ +... |++||+.+++++
T Consensus 442 ~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~---t~edid~~~~~l 508 (515)
T 2jis_A 442 SLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSAL---TCADMDFLLNEL 508 (515)
T ss_dssp GGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTC---CHHHHHHHHHHH
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCC---CHHHHHHHHHHH
Confidence 0 0 00000000 1234677888999765321 11236899988 6655 589999999975
No 194
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=97.34 E-value=0.0011 Score=66.67 Aligned_cols=51 Identities=10% Similarity=-0.093 Sum_probs=34.5
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch---HHHhhc-CCccccceeeechh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFK-GSFWDKLIVHTSTC 57 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLg-GG~~PigAv~~~~e 57 (329)
.+|+++|.||++.+|...+.-......+.... ++|.++ .| +++|.++++++
T Consensus 276 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~l~~~~~ 330 (533)
T 3f6t_A 276 NPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTG-WRLGVIALNEK 330 (533)
T ss_dssp CTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGG-GCEEEEEEESS
T ss_pred CCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCcc-cceEEEEECcH
Confidence 47999999999999865432222211122222 679997 67 49999998876
No 195
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=97.32 E-value=0.001 Score=65.77 Aligned_cols=184 Identities=10% Similarity=-0.064 Sum_probs=96.4
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCC-cch-----HHHhhcCCccccceeeech-hHHHhhhhhhhccCCCCc-cc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRF-----VQKDFKGSFWDKLIVHTST-CTFENFIKIKYQILKTPA-HK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PD-----i~KaLgGG~~PigAv~~~~-eI~d~~~~~~~~~~~~~~-hg 76 (329)
..||+++++|+++.|+.....-+.....|+ .+| ..|.+++.+ ++|++++++ ++++..... .. .+. ++
T Consensus 272 ~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~-~~g~l~~~~~~~~~~~~~~-~~---~~l~~~ 346 (504)
T 2okj_A 272 EKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLL-QCSAILVKEKGILQGCNQM-CA---GYLFQP 346 (504)
T ss_dssp HHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCS-CCEEEEESSTTHHHHHHCC-CC---SSSCCS
T ss_pred HHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCc-ceEEEEEECHHHHHHHhcC-CC---ccccCC
Confidence 457999999999998865433222333455 567 239888774 899999987 466532210 00 011 11
Q ss_pred h----------hh------hcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEe
Q psy7882 77 L----------KI------SDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDL 135 (329)
Q Consensus 77 ~----------T~------agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef 135 (329)
. ++ ..+ +++.++++. +-+++ .++..++.++|.+.|+++ ..+..+......+.++.+.+
T Consensus 347 ~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~~~~~~p~~~~v~f~~ 425 (504)
T 2okj_A 347 DKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNR-EEFEMVFNGEPEHTNVCFWY 425 (504)
T ss_dssp CCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-TTEEESSSSCCSSSCEEEEE
T ss_pred cccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEecCCCCeEEEEEEE
Confidence 0 00 112 333333332 22333 667777778887777653 11111111012344455554
Q ss_pred ecCCCCC--CC--CC---hHHHHHHHHHHHHCCcee-eccCCCC--CEEEEeCc-cccCcCCHHHHHHHHhcc
Q psy7882 136 VQDKETK--VP--LN---SRHMTHILDSCKEHGLLL-GRGGLSG--NTLTALQP-KLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 136 ~~d~~~~--~p--~~---~~~~~~~~~~l~e~GVLl-~~~G~~~--nvIrl~PP-L~It~~t~eeId~~l~~~ 197 (329)
.+..... .. +. ......+.+.|.++|+++ .+....+ +.+|+.+. ... |++||+.+++++
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~---t~edi~~~~~~l 495 (504)
T 2okj_A 426 IPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAA---TQSDIDFLIEEI 495 (504)
T ss_dssp CCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTC---CHHHHHHHHHHH
T ss_pred eCccccccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCC---CHHHHHHHHHHH
Confidence 3211000 00 00 012456888899999643 3211112 57998874 333 689999999975
No 196
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=97.26 E-value=0.0011 Score=65.51 Aligned_cols=53 Identities=8% Similarity=-0.140 Sum_probs=37.5
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeeechhHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHTSTCTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~~~eI~d~~~ 63 (329)
..+|+++|+||+++.. .. +......+| +.|.++|+. +++|++++++++++.+.
T Consensus 227 ~~~g~~livD~a~~~~----~~--~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~ 285 (445)
T 1qgn_A 227 HEKGALVCIDGTFATP----LN--QKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIR 285 (445)
T ss_dssp HHTTCEEEEECTTTCT----TT--CCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHH
T ss_pred HHcCCEEEEECCCccc----cc--CCccccCCEEEEECCcccccccccceEEEEEECHHHHHHHH
Confidence 3579999999999732 11 223345578 359998763 36899999999887765
No 197
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=97.19 E-value=0.0032 Score=58.11 Aligned_cols=164 Identities=9% Similarity=-0.074 Sum_probs=83.8
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC-CCCccchh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL-KTPAHKLK 78 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~-~~~~hg~T 78 (329)
..||+ +|.||+++. |.. .+..+.++ +| +.|.+ |+ .++|+++++++. .+.+...+.. ......+
T Consensus 165 ~~~~~-li~D~a~~~-~~~--~~~~~~~~--~d~~~~s~~K~~-g~-~g~g~~~~~~~~--~~~~~~~~~~~~~~~~~~- 233 (382)
T 4hvk_A 165 AGKAA-LHIDATASV-GQI--EVDVEKIG--ADMLTISSNDIY-GP-KGVGALWIRKEA--KLQPVILGGGQENGLRSG- 233 (382)
T ss_dssp SSSSE-EEEECTTTB-TTB--CCCHHHHT--CSEEEEESGGGT-SC-TTCEEEEEETTC--CCCCSSCSSCTGGGTSCS-
T ss_pred HHcCE-EEEEhHHhc-CCC--CCCchhcC--CCEEEEeHHHhc-CC-CceEEEEEcCcc--CcCcccccCCCcCccccC-
Confidence 46799 999999873 221 11222222 46 45953 33 258888888764 1111000000 0000111
Q ss_pred hhcc-HHH---HHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE----EeeceeeEEEeecCCCCCCCCCh
Q psy7882 79 ISDT-VRP---HVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV----RGKGLMIGVDLVQDKETKVPLNS 147 (329)
Q Consensus 79 ~agn-lA~---aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V----RG~GLm~gIef~~d~~~~~p~~~ 147 (329)
+.+ .++ .+++.. +.+++ .++.+++.++|.+.|++ .|.+.-. .+.+.++.+.+.. . +
T Consensus 234 -~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~~~~~-~------~- 300 (382)
T 4hvk_A 234 -SENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK----IEESYLNGHPEKRLPNNVNVRFSY-I------E- 300 (382)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----STTEEECSCSSSBCTTEEEEEETT-C------C-
T ss_pred -CcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc----CCCeEEeCCccccCCCEEEEEECC-C------C-
Confidence 122 222 223221 22222 45566666666666653 3322111 1123355555531 1 1
Q ss_pred HHHHHHHHHHHHCCceeeccCC---C------------------CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 148 RHMTHILDSCKEHGLLLGRGGL---S------------------GNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 148 ~~~~~~~~~l~e~GVLl~~~G~---~------------------~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
...+.+.|.++||++.+... . .+.+|+.+.... +++|++++++++
T Consensus 301 --~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~---t~e~i~~~~~~l 366 (382)
T 4hvk_A 301 --GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYN---TDEDVDRLLEVL 366 (382)
T ss_dssp --HHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTC---CHHHHHHHHHHH
T ss_pred --HHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCC---CHHHHHHHHHHH
Confidence 34578888999999876320 0 478999887665 589999999985
No 198
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=97.15 E-value=0.0031 Score=60.24 Aligned_cols=52 Identities=13% Similarity=-0.029 Sum_probs=35.8
Q ss_pred ccccceEEehhHhhchhc-cchhhhhcccCCcch-----H--HHhhcCCccccceeeec-hhHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGD-NGTYLGFQCLQICRF-----V--QKDFKGSFWDKLIVHTS-TCTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGR-TG~~fA~e~~GV~PD-----i--~KaLgGG~~PigAv~~~-~eI~d~~~ 63 (329)
..+|+++|.||+++.+.+ .|. ..+..+| + +|.+++| ..|.++++ +++.+.+.
T Consensus 154 ~~~~~~li~D~a~~~~~~~~~~-----~~~~~~~~~~~s~s~~K~~~~g--~~g~~~~~~~~l~~~~~ 214 (418)
T 2c81_A 154 QEHNLFVIEDCAQSHGSVWNNQ-----RAGTIGDIGAFSCQQGKVLTAG--EGGIIVTKNPRLFELIQ 214 (418)
T ss_dssp HHTTCEEEEECTTCTTCEETTE-----ETTSSSSEEEEECCTTSSSCSS--SCEEEEESCHHHHHHHH
T ss_pred HHCCCEEEEECcccccCccCCE-----ecccccceEEEeccCCcccCCC--CeEEEEECCHHHHHHHH
Confidence 357999999999997753 222 2333345 3 6999886 67888884 67776654
No 199
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=97.14 E-value=0.0015 Score=62.42 Aligned_cols=159 Identities=12% Similarity=0.002 Sum_probs=86.2
Q ss_pred ceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhH-HHhhhhhhhccCCCCccc------
Q psy7882 9 CGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCT-FENFIKIKYQILKTPAHK------ 76 (329)
Q Consensus 9 iLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI-~d~~~~~~~~~~~~~~hg------ 76 (329)
+++|+||++ ++|++. +... ...+| ++|.+ |. .+|++++++++ ...+.+ ..++
T Consensus 216 ~~livDea~-~~~~~~--~~~~--~~~~d~~~~s~~K~~--g~-~~G~~~~~~~~~~~~~~~--------~~~~~~~~~~ 279 (432)
T 3a9z_A 216 VLVHTDAAQ-ALGKRR--VDVE--DLGVDFLTIVGHKFY--GP-RIGALYVRGVGKLTPLYP--------MLFGGGQERN 279 (432)
T ss_dssp CEEEEECTT-TTTTSC--CCHH--HHCCSEEEEEGGGTT--CC-SCEEEEETTBTTTBCCCC--------SCCSSCGGGG
T ss_pred eEEEEEchh-hhCCcc--cChh--hcCCCEEEEehhHhc--CC-cceEEEEccccccCCcCc--------eeecCCcccc
Confidence 999999999 565542 1111 23477 46965 43 48999998775 222211 1111
Q ss_pred -hhhhcc-HHHHH---HHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCce--e---eEEeeceeeEEEeecCCCCCC
Q psy7882 77 -LKISDT-VRPHV---QIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIV--G---DVRGKGLMIGVDLVQDKETKV 143 (329)
Q Consensus 77 -~T~agn-lA~aa---ala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v--~---~VRG~GLm~gIef~~d~~~~~ 143 (329)
.+++.+ .++++ +++. +.+++ .++++++.++|.+.|+++.. .... . ..+..|.+..+.+....
T Consensus 280 ~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 354 (432)
T 3a9z_A 280 FRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFG-KRIHLNSRFPGVERLPNTCNFSIQGSQ---- 354 (432)
T ss_dssp TSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG-GGEEESSCCTTCCBCTTEEEEEECSTT----
T ss_pred ccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccC-CcEEEeCCCCcccCCCCEEEEEeCCCC----
Confidence 112334 33333 3332 22233 67788888889888887532 1111 1 12355778888875311
Q ss_pred CCChHHHHHHHHHHHHCCceeecc------------------CC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 144 PLNSRHMTHILDSCKEHGLLLGRG------------------GL----SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 144 p~~~~~~~~~~~~l~e~GVLl~~~------------------G~----~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+ ...+...+ .|+++... |. ..+.+|+.++... |++|++++++++
T Consensus 355 -~~---~~~~~~~l--~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~---t~eei~~~~~~l 421 (432)
T 3a9z_A 355 -LR---GYMVLAQC--QTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRST---TRAEVDLIVQDL 421 (432)
T ss_dssp -CC---HHHHHHHC--SSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTC---CHHHHHHHHHHH
T ss_pred -Cc---HHHHHHHh--cCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCC---CHHHHHHHHHHH
Confidence 01 12233332 23333210 11 1378999998766 589999999985
No 200
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=97.06 E-value=0.0049 Score=57.16 Aligned_cols=162 Identities=10% Similarity=-0.069 Sum_probs=86.0
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhH-HHhhhhhhhccCCCCccch-
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCT-FENFIKIKYQILKTPAHKL- 77 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI-~d~~~~~~~~~~~~~~hg~- 77 (329)
..||++ |.||++. +|... +....+ .+| +.|. .|...+|+++++++. +..... +. . .....
T Consensus 165 ~~~~~~-i~D~a~~-~g~~~--~~~~~~--~~di~~~s~sK~--~g~~g~G~~~~~~~~~l~~~~~---~~-~-~~~~~~ 231 (382)
T 4eb5_A 165 AGKAAL-HIDATAS-VGQIE--VDVEKI--GADMLTISSNDI--YGPKGVGALWIRKEAKLQPVIL---GG-G-QENGLR 231 (382)
T ss_dssp TTSSEE-EEECTTT-BTTBC--CCHHHH--TCSEEEEETGGG--TCCSSCEEEEEETTCCCCCSSC---SS-C-TGGGTS
T ss_pred HHCCCE-EEEcchh-cCCcc--cCcccc--CCCEEEeehHHh--cCCCceEEEEEccccccCceec---CC-C-cccccc
Confidence 457999 9999997 54321 112222 357 4596 332237888888763 111100 00 0 00011
Q ss_pred hhhcc-HHH---HHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-----eceeeEEEeecCCCCCCCC
Q psy7882 78 KISDT-VRP---HVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-----KGLMIGVDLVQDKETKVPL 145 (329)
Q Consensus 78 T~agn-lA~---aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-----~GLm~gIef~~d~~~~~p~ 145 (329)
..+.+ .++ .++++. +-+++ .++.+++.+++.+.|++ .|.+ .+.+ .|.++.+.+. +.
T Consensus 232 ~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~-~~~~~~~~~~~~~~~~~~~-~~------ 299 (382)
T 4eb5_A 232 SGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK----IEES-YLNGHPEKRLPNNVNVRFS-YI------ 299 (382)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----STTE-EECSCSSSBCTTEEEEEET-TS------
T ss_pred CCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh----CCCe-EEeCCcccCCCCEEEEEeC-Cc------
Confidence 11122 222 223322 11222 45666666667666654 3322 1221 2556667663 11
Q ss_pred ChHHHHHHHHHHHHCCceeeccCC---------------------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 146 NSRHMTHILDSCKEHGLLLGRGGL---------------------SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 146 ~~~~~~~~~~~l~e~GVLl~~~G~---------------------~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+ ...+.+.|.++||++.+... ..+.+|+.+.... +++|++++++++
T Consensus 300 ~---~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l 366 (382)
T 4eb5_A 300 E---GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYN---TDEDVDRLLEVL 366 (382)
T ss_dssp C---HHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTC---CHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCC---CHHHHHHHHHHH
Confidence 1 24577888899999876321 1478999977655 589999999985
No 201
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=97.04 E-value=0.0014 Score=61.49 Aligned_cols=167 Identities=13% Similarity=-0.023 Sum_probs=73.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceee-echh-HH---HhhhhhhhccCCCCc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVH-TSTC-TF---ENFIKIKYQILKTPA 74 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~-~~~e-I~---d~~~~~~~~~~~~~~ 74 (329)
.++|+++|.||+++ +|.. ....... +| +.| +.|+ .++|+++ ++++ +. ..+.+..... ...
T Consensus 186 ~~~~~~li~D~a~~-~~~~----~~~~~~~-~d~~~~s~~K-~~g~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 255 (400)
T 3vax_A 186 RATPTYLHVDAAQG-YGKV----PGDLTTP-IDMISISGHK-IGAP-KGVGALVTRRREEMDDERVPLEPIMFGG--GQE 255 (400)
T ss_dssp TTSSCEEEEECTTT-TTTS----GGGGGSC-CSEEEEETGG-GTSC-SSCEEEEECBCSSSTTCBCCCCCSSCSS--CTG
T ss_pred HhcCCEEEEEhhhh-cCCC----CcChhhc-CcEEEEeHHH-hCCC-CceEEEEEecchhccccccccCceecCC--Cce
Confidence 46799999999997 3322 1222233 88 459 5444 3688888 7762 11 1111100000 000
Q ss_pred cch-hhhcc-HHHHHHHHh-hHH----hH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCC
Q psy7882 75 HKL-KISDT-VRPHVQIKK-SVL----ER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPL 145 (329)
Q Consensus 75 hg~-T~agn-lA~aaala~-~il----e~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~ 145 (329)
.+. +.+.+ .++++..+. +.+ ++ .++.+++.++|.+.|+ + ......... .+.+.++.+.+.. .
T Consensus 256 ~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~-~-~~~~~~~~~~~~~~~~~~~~~~~-~------ 326 (400)
T 3vax_A 256 RKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA-S-TSFQVNGDQDHVVPHILNLSFED-V------ 326 (400)
T ss_dssp GGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT-T-TTCEECSCTTSBCTTEEEEECTT-C------
T ss_pred eeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC-C-CCEEEeCCcccCCCCEEEEEeCC-C------
Confidence 011 11123 222222222 222 22 5566677777777665 2 111111111 1234466665531 1
Q ss_pred ChHHHHHHHHHHHHCCceeeccC-----------------CC----CCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882 146 NSRHMTHILDSCKEHGLLLGRGG-----------------LS----GNTLTALQ-PKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 146 ~~~~~~~~~~~l~e~GVLl~~~G-----------------~~----~nvIrl~P-PL~It~~t~eeId~~l~~~ 197 (329)
+ ...+.+.|. +||++.+.. .. .+.+||.+ +... +++|++++++++
T Consensus 327 ~---~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~---t~e~i~~~~~~l 393 (400)
T 3vax_A 327 D---AEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQA---TDLDVEELARGV 393 (400)
T ss_dssp C---HHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC-----------------
T ss_pred C---HHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCC---CHHHHHHHHHHH
Confidence 1 345777777 898876521 00 38899998 7766 478999999875
No 202
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=96.90 E-value=0.018 Score=56.24 Aligned_cols=167 Identities=7% Similarity=-0.136 Sum_probs=91.5
Q ss_pred ccccceEEehhHhhchhccchh-hhhcc-cCCcch-----HHHhhcCCccccceeeec-hhHHHhhhhhhhccCCCCccc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTY-LGFQC-LQICRF-----VQKDFKGSFWDKLIVHTS-TCTFENFIKIKYQILKTPAHK 76 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~-~GV~PD-----i~KaLgGG~~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg 76 (329)
..+|+++|+||...++.. |.. ..... .+ .+| ..|.++++ ..+|+++++ +++.+.+.+ ...|
T Consensus 258 ~~~g~~v~vD~A~~~~~~-g~~~~~~~~~~~-~~D~~~~s~hK~~~~p-~g~G~l~~~~~~~~~~l~~--------~~~g 326 (456)
T 2z67_A 258 ENYDIPHIINGAYAIQNN-YYLEKLKKAFKY-RVDAVVSSSDKNLLTP-IGGGLVYSTDAEFIKEISL--------SYPG 326 (456)
T ss_dssp HHHTCCEEEECTTTTTCH-HHHHHHHHHHTS-CCSEEEEEHHHHHCCC-SSCEEEEESCHHHHHHHHT--------TSCS
T ss_pred HHcCCcEEEECcchHHHH-HhhHHHHHhhCC-CCCEEEEcCCCCcCCC-CCeEEEEEcCHHHHhhcCc--------CCCC
Confidence 357999999988665522 210 11111 12 577 35987776 378999994 667666542 1122
Q ss_pred hhhhc-cHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCc-eeeEEeeceeeEEEeecCCCCCCCCChHHH
Q psy7882 77 LKISD-TVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAI-VGDVRGKGLMIGVDLVQDKETKVPLNSRHM 150 (329)
Q Consensus 77 ~T~ag-nlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~-v~~VRG~GLm~gIef~~d~~~~~p~~~~~~ 150 (329)
.+... .++..+++.. +-+++ .++..++.++|.++|+++...++. +.... .++.+.+..+. ..
T Consensus 327 ~~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~~---~~v~~~~~~~~---------~~ 394 (456)
T 2z67_A 327 RASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVE---SPIASCISVNS---------DP 394 (456)
T ss_dssp CBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCCC---CSSEEEEECSS---------CH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecCCC---CeEEEEEeccc---------HH
Confidence 21111 1333333322 22333 678889999999999887433231 11111 34455553111 02
Q ss_pred HHHHHHHHHCCce-eecc------------CCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLL-LGRG------------GLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVL-l~~~------------G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+...|.++|+. ++.. ......+|+...+-. |++|||++++++
T Consensus 395 ~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~---t~eeid~~l~~L 451 (456)
T 2z67_A 395 VEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGV---RTEDIVNSVSKL 451 (456)
T ss_dssp HHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCC---CHHHHHHHHHHH
Confidence 4577788888852 1111 011356777765544 689999999975
No 203
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=96.68 E-value=0.0012 Score=64.22 Aligned_cols=47 Identities=6% Similarity=-0.104 Sum_probs=31.3
Q ss_pred ccccceEEehhHhhchhccch---hhhhccc-CCcch------HHHhhc-CCcccccee
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT---YLGFQCL-QICRF------VQKDFK-GSFWDKLIV 52 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~---~fA~e~~-GV~PD------i~KaLg-GG~~PigAv 52 (329)
..||+++|+||+..+|+..+. .+....+ +..++ ++|.++ .| +.+|.+
T Consensus 232 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~l 289 (448)
T 3meb_A 232 KEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYG-ERIGCL 289 (448)
T ss_dssp HHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGG-GCCEEE
T ss_pred HHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCcc-ccceee
Confidence 357999999999999977651 2333322 22344 569987 56 488886
No 204
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=96.61 E-value=0.028 Score=52.13 Aligned_cols=168 Identities=11% Similarity=-0.020 Sum_probs=86.1
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCC--C-cc-ch
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKT--P-AH-KL 77 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~--~-~h-g~ 77 (329)
+|+++|+||++. +|-. ......+ | ..|.++. .-+|.+.+++++.+.+.+........ . .+ ..
T Consensus 166 ~~~~vivD~a~~-~~~~--~~~~~~~----d~~~~s~~K~~g~--~G~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 236 (362)
T 2c0r_A 166 GSVPLIGDMSSD-ILSR--PFDLNQF----GLVYAGAQKNLGP--SGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSL 236 (362)
T ss_dssp TTSCEEEECTTT-TTSS--CCCGGGC----SEEEEETTTTTCC--SSCEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTC
T ss_pred CCCEEEEEChhh-ccCC--ccchhHC----cEEEEeccccccC--cCcEEEEEcHHHHhhccccCchHHhHHHHhhccCc
Confidence 789999999986 3211 1111111 6 4598852 12688888988765543100000000 0 00 00
Q ss_pred hhhcc----HHHHHHHHh--h--HHhH-HHHHHHHHHHHHHHHHHHHHhC-Cceee--EEeeceeeEEEeecCCCCCCCC
Q psy7882 78 KISDT----VRPHVQIKK--S--VLER-FVHTYVVGNFLLTHLSKLREEF-AIVGD--VRGKGLMIGVDLVQDKETKVPL 145 (329)
Q Consensus 78 T~agn----lA~aaala~--~--ile~-le~v~~lG~~L~~gL~eL~~~~-p~v~~--VRG~GLm~gIef~~d~~~~~p~ 145 (329)
.++.+ .++.++++. + -+++ .++.+++.++|.++|+++- .. +.... .+ .+.++.+.+..
T Consensus 237 ~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~-~~~~~~~~~~~-------- 306 (362)
T 2c0r_A 237 YNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSG-GFYRGCVDVDSR-SDMNITFRLAS-------- 306 (362)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTST-TSSEESSCGGGB-CSSEEEEECSC--------
T ss_pred CCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcC-CccccCCChHHc-CCcEEEEEcCC--------
Confidence 11222 333444432 1 2333 5566677777777766531 01 11110 11 23344444421
Q ss_pred ChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 146 NSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 146 ~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
......+.+.|.++||.+.+.....+.+|+..... ++++|++++++++
T Consensus 307 -~~~~~~~~~~L~~~gi~~~~g~~~~~~iRis~~~~---~~~e~i~~l~~~l 354 (362)
T 2c0r_A 307 -EELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNA---VPYESCEALVQFM 354 (362)
T ss_dssp -HHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTT---SCHHHHHHHHHHH
T ss_pred -cchHHHHHHHHHHCCCeeccCCCCCCEEEEECCCC---CCHHHHHHHHHHH
Confidence 12345678888999998765322235699986432 3689999999985
No 205
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=96.54 E-value=0.004 Score=61.78 Aligned_cols=178 Identities=9% Similarity=-0.037 Sum_probs=86.7
Q ss_pred ccccceEEehhHhhchhccch--hhhh----cccCC-cch--------HHHhhc--CCccccceeee---chhHHHhhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT--YLGF----QCLQI-CRF--------VQKDFK--GSFWDKLIVHT---STCTFENFIK 64 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~--~fA~----e~~GV-~PD--------i~KaLg--GG~~PigAv~~---~~eI~d~~~~ 64 (329)
..||+++|+||+..++...+. ...+ ..+|. ..| ++|++. .| +.+|.+++ ++++.+.+..
T Consensus 267 ~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~ 345 (500)
T 3tcm_A 267 KNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECG-KRGGYFEITGFSAPVREQIYK 345 (500)
T ss_dssp HHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGG-GCCEEEEEESCCTTHHHHHHH
T ss_pred HHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCc-cceEEEEEeCCCHHHHHHHHH
Confidence 457999999999988644321 1111 12222 222 469984 36 48888887 8888887653
Q ss_pred hhhccCCCCccchhhhccHHHHHHHHh-h--------HHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceee
Q psy7882 65 IKYQILKTPAHKLKISDTVRPHVQIKK-S--------VLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMI 131 (329)
Q Consensus 65 ~~~~~~~~~~hg~T~agnlA~aaala~-~--------ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~ 131 (329)
... ....+++.+. .+++.++.. + ..+. .+++++..++|.+.|++ .|.+.-+...|.|+
T Consensus 346 --~~~--~~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~~g~~~~~~~g~~~ 416 (500)
T 3tcm_A 346 --IAS--VNLCSNITGQ-ILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNK----LEGITCNEAEGAMY 416 (500)
T ss_dssp --HHH--TTCCCCHHHH-HHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----STTEECCCCCBTTE
T ss_pred --HHh--cccCCCHHHH-HHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCcEEecCCeEEE
Confidence 110 0111111111 223333321 0 1111 34455555556555554 34333333344333
Q ss_pred E-EEeecCCCCCC---CCChHHHHH-HHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 132 G-VDLVQDKETKV---PLNSRHMTH-ILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 132 g-Ief~~d~~~~~---p~~~~~~~~-~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
. +.+..+..... .....-... +...+.++||++.+.. ...+.+|+... . ++++|+++++++
T Consensus 417 ~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~--~---~~e~i~~~i~~l 487 (500)
T 3tcm_A 417 VFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL--P---QEDKIPAVISRF 487 (500)
T ss_dssp ECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC--S---CTTTHHHHHHHH
T ss_pred EeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC--C---CHHHHHHHHHHH
Confidence 2 22321100000 000000122 2355667899998742 12357888754 2 567899998875
No 206
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=96.10 E-value=0.08 Score=50.28 Aligned_cols=153 Identities=8% Similarity=-0.045 Sum_probs=81.9
Q ss_pred cceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeee-chhHHHhhhhhhhccCCCCccchh
Q psy7882 8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHT-STCTFENFIKIKYQILKTPAHKLK 78 (329)
Q Consensus 8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~-~~eI~d~~~~~~~~~~~~~~hg~T 78 (329)
++++|.||++.. + ...... ..+| ++|.++ .| +-+|.+++ ++++.+.+.. . ....+
T Consensus 185 ~~~ii~De~y~~-~---~~~~l~---~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~~l~~~l~~--~------~~~~~ 248 (391)
T 3bwn_A 185 EAKVIHDFAYYW-P---HYTPIT---RRQDHDIMLFTFSKITGHAG-SRIGWALVKDKEVAKKMVE--Y------IIVNS 248 (391)
T ss_dssp CCEEEEECTTCS-T---TTSCCC---CCBCCSEEEEEHHHHHSCGG-GCEEEEEECCHHHHHHHHH--H------HHHHH
T ss_pred CCEEEEeCCCCC-C---CCCccc---cCCCCeEEEEechhhcCCCc-cceEEEEecCHHHHHHHHH--H------hcccc
Confidence 399999999963 2 111111 1233 679986 56 47788886 8888877653 1 01112
Q ss_pred hhcc----HHHHHHHHh-h-----------HHhH-HHHHHHHHHHHHHHHHHHHHhCCceee--------------EEee
Q psy7882 79 ISDT----VRPHVQIKK-S-----------VLER-FVHTYVVGNFLLTHLSKLREEFAIVGD--------------VRGK 127 (329)
Q Consensus 79 ~agn----lA~aaala~-~-----------ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~--------------VRG~ 127 (329)
++.+ .+++++++. . .+++ .++.++.-+++.+.|++ +|.+.- +...
T Consensus 249 ~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~p~~~~~~f~~~~~~~~ 324 (391)
T 3bwn_A 249 IGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKE----SDAFTLPKYPEAFCNYFGKSLESY 324 (391)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHT----CSSEECCCCCCEEETTTTEEECCC
T ss_pred cCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHh----CCCcccccCCccccccccccCCCc
Confidence 2223 233444443 1 1222 23344444444444443 332110 0122
Q ss_pred ceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 128 GLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 128 GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
|+++.+.+..+ ..+...+.++||.+.++.. ..+.+||.-. . ++++++++++++
T Consensus 325 g~~~~~~~~~~------------~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~--~---~~e~i~~~~~~L 380 (391)
T 3bwn_A 325 PAFAWLGTKEE------------TDLVSELRRHKVMSRAGERCGSDKKHVRVSML--S---REDVFNVFLERL 380 (391)
T ss_dssp CSEEEEEESSS------------CCHHHHHHHTTEECEEGGGGTCCTTEEEEESC--S---CHHHHHHHHHHH
T ss_pred ceEEEecCCcH------------HHHHHHHHHCCEEEccCCCCCCCCCEEEEEec--C---CHHHHHHHHHHH
Confidence 44555666321 1255667789999988422 2467888754 1 578899999874
No 207
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=96.00 E-value=0.0049 Score=58.12 Aligned_cols=53 Identities=6% Similarity=-0.145 Sum_probs=33.5
Q ss_pred ccccceEEehhHhhchhccch---hhhhccc-CCcch------HHHhhc-CCccccceeee---chhH
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT---YLGFQCL-QICRF------VQKDFK-GSFWDKLIVHT---STCT 58 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~---~fA~e~~-GV~PD------i~KaLg-GG~~PigAv~~---~~eI 58 (329)
..||+++|.||+..+|+..+. .++...+ +..++ ++|.++ .| +.+|.+++ +++.
T Consensus 205 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~RiG~l~~~~~~~~~ 271 (401)
T 7aat_A 205 KKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYG-ERAGAFTVICRDAEE 271 (401)
T ss_dssp HHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGG-GCEEEEEEECSSHHH
T ss_pred HhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCccccccc-CceEEEEEEeCCHHH
Confidence 357999999999998876542 2233222 22233 569987 55 47887665 5553
No 208
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=95.92 E-value=0.018 Score=56.36 Aligned_cols=46 Identities=15% Similarity=-0.138 Sum_probs=28.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeee
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHT 54 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~ 54 (329)
..+|+++|+||++. +|.++....+|+... +.|.++|.-..+|++++
T Consensus 194 ~~~g~~livD~a~~----~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv 242 (430)
T 3ri6_A 194 HAKGIPLVVDTTMT----PPYLLEAKRLGVDIEVLSSTKFISGGGTSVGGVLI 242 (430)
T ss_dssp HTTTCCEEEECTTS----CTTTCCGGGGTCSEEEEECCCEEETTEEECCEEEE
T ss_pred HHcCCEEEEECCCc----ccccCChHHcCCEEEEECCcccccCCCCceEEEEE
Confidence 46799999999986 333333334554322 45999885334554444
No 209
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=95.90 E-value=0.06 Score=52.09 Aligned_cols=168 Identities=10% Similarity=-0.059 Sum_probs=89.3
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch-HH--HhhcCCccccceeeechhHHHhhhhhhhccC------CCCccch
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-VQ--KDFKGSFWDKLIVHTSTCTFENFIKIKYQIL------KTPAHKL 77 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-i~--KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~------~~~~hg~ 77 (329)
+|+++++|=+|+ +|.. -.-.+.+|+ + ++ |.+ | -.-+|++.+++++.+.+.+...... .......
T Consensus 191 ~g~~~~vDa~qs-~g~~--pidv~~~~~--~~~s~hK~l-G-P~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~g 263 (386)
T 3qm2_A 191 PEVVVTADFSST-ILSA--PLDVSRYGV--IYAGAQKNI-G-PAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFN 263 (386)
T ss_dssp TTCCEEEECTTT-TTSS--CCCGGGCSE--EEEETTTTT-C-CTTEEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-----
T ss_pred CCCEEEEEcccc-cCCC--CCCccccCE--EEEeccccc-C-CCccEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCC
Confidence 689999999988 4332 233444554 4 22 988 3 2236888899887543221000000 0001112
Q ss_pred hhhcc--HHHHHHHHh--hH--HhH-HHHHHHHHHHHHHHHHHHHHhCCcee---eE-EeeceeeEEEeecCCCCCCCCC
Q psy7882 78 KISDT--VRPHVQIKK--SV--LER-FVHTYVVGNFLLTHLSKLREEFAIVG---DV-RGKGLMIGVDLVQDKETKVPLN 146 (329)
Q Consensus 78 T~agn--lA~aaala~--~i--le~-le~v~~lG~~L~~gL~eL~~~~p~v~---~V-RG~GLm~gIef~~d~~~~~p~~ 146 (329)
|-+-. .++.++++- +. ++. .++.+++.++|.++|+++ +... +- ......+.+.+.. .
T Consensus 264 Tp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~----~~~~~~~~~~~rs~~iv~f~~~~-~------- 331 (386)
T 3qm2_A 264 TPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS----DFYRNDVAQANRSRMNVPFQLAD-N------- 331 (386)
T ss_dssp --CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC----SSEECCBCGGGBCSSEEEEEESS-G-------
T ss_pred CCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC----CCcccCCCHHHcCceEEEEECCC-c-------
Confidence 32222 444455543 22 444 566777778887777664 2211 11 0112355666632 1
Q ss_pred hHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 147 SRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 147 ~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.....+...+.++||.+...-.....+|+..-... |++|||.+++++
T Consensus 332 -~~~~~~~~~L~~~gI~~~~g~~~~~~iRiS~~~~~---t~edId~l~~~l 378 (386)
T 3qm2_A 332 -TLDKVFLEESFAAGLHALKGHRVVGGMRASIYNAM---PIEGVKALTDFM 378 (386)
T ss_dssp -GGHHHHHHHHHHTTEECCBCCTTTCSEEEECCTTS---CHHHHHHHHHHH
T ss_pred -cccHHHHHHHHHCCCEEeCCCCCcCeEEEEcCCCC---CHHHHHHHHHHH
Confidence 11145667788999987653111245999964444 689999999985
No 210
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=95.89 E-value=0.043 Score=54.04 Aligned_cols=171 Identities=12% Similarity=0.031 Sum_probs=89.3
Q ss_pred ccccceEEehhHhh-chhccchhhhhcccCCcch-----HHHhhcCCccccceeeechh---------------HHHhhh
Q psy7882 5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTC---------------TFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~e---------------I~d~~~ 63 (329)
..+|+++|.||++. |+--.|.. .. .++ ..| ..|.|+|. ..|.++++++ +.+.+.
T Consensus 218 ~~~g~~livD~ah~~g~~~~~~~-~~-p~~-~~div~~s~~K~l~Gp--rgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~ 292 (483)
T 1rv3_A 218 DENGAYLMADMAHISGLVVAGVV-PS-PFE-HCHVVTTTTHKTLRGC--RAGMIFYRRGVRSVDPKTGKEILYNLESLIN 292 (483)
T ss_dssp HHTTCEEEEECTTTHHHHHHTSS-CC-GGG-TCSEEEEESSGGGCCC--SCEEEEEECSBCC-------CCBCCHHHHHH
T ss_pred HHcCCEEEEEccchhcccccCCC-CC-CCC-CCcEEEecCcccCCCC--CceEEEEcchhhhhccccCcchhhHHHHHhh
Confidence 35799999999976 44222210 00 000 246 34999653 4588888874 222222
Q ss_pred hhhhccCCCCccchhhhcc--HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEee
Q psy7882 64 KIKYQILKTPAHKLKISDT--VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLV 136 (329)
Q Consensus 64 ~~~~~~~~~~~hg~T~agn--lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~ 136 (329)
.... +.. .+|...+ .+.+++++. .-+++ .+++.++.++|.+.|+++ ....+.. |.+ .+.-+.+.
T Consensus 293 ~~~~----~~~-~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~--~~~~~~~~v~~~ 363 (483)
T 1rv3_A 293 SAVF----PGL-QGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL--GYKIVTG--GSDNHLILVDLR 363 (483)
T ss_dssp HHHT----TTT-CCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT--TCEEGGG--SCSSSEEEEEGG
T ss_pred hhcC----Ccc-cCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc--CCEeccC--CCCCceEEEecc
Confidence 1000 011 1111111 233334432 12333 567778888888888764 2222211 111 24445553
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHCCceee----ccC---CCCCEEEEeCccccC-cCCHHHHHHHHhcc
Q psy7882 137 QDKETKVPLNSRHMTHILDSCKEHGLLLG----RGG---LSGNTLTALQPKLLN-YWTDFVGTPCLDCE 197 (329)
Q Consensus 137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~----~~G---~~~nvIrl~PPL~It-~~t~eeId~~l~~~ 197 (329)
... .+ ...+.+.|.+.||.+. |.. .....+||..|...+ ..+++|++++++++
T Consensus 364 ~~g-----~~---~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l 424 (483)
T 1rv3_A 364 SKG-----TD---GGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFI 424 (483)
T ss_dssp GGT-----CC---HHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHH
T ss_pred CCC-----CC---HHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHH
Confidence 211 11 2346677788999988 521 134689999886442 12379999999975
No 211
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=95.87 E-value=0.036 Score=55.49 Aligned_cols=89 Identities=12% Similarity=0.085 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeecc---C----
Q psy7882 97 FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRG---G---- 168 (329)
Q Consensus 97 le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~---G---- 168 (329)
.+++.+..++|.++|++. .+..+. .|.+ -++-+.+.... . ....+...|.+.||.+... +
T Consensus 337 ~~~~~~na~~L~~~L~~~--G~~v~~--~~t~t~lv~vdl~~~g-----~---~~~~~~~~L~~~GI~v~~~~~p~d~~p 404 (490)
T 2a7v_A 337 SLQVLKNARAMADALLER--GYSLVS--GGTDNHLVLVDLRPKG-----L---DGARAERVLELVSITANKNTCPGDRSA 404 (490)
T ss_dssp HHHHHHHHHHHHHHHHHT--TCEEGG--GSCSSSEEEEECTTTT-----C---CHHHHHHHHHHTTEECEEECCTTCCCS
T ss_pred HHHHHHHHHHHHHHHHHc--CcEEec--CCCCCeEEEEEeCCCC-----C---CHHHHHHHHHhCCeEEecCccCCCCCC
Confidence 567788888888888764 222221 1111 24445553211 1 1345777888899999742 1
Q ss_pred CCCCEEEEeCc-cccCcCCHHHHHHHHhcc
Q psy7882 169 LSGNTLTALQP-KLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 169 ~~~nvIrl~PP-L~It~~t~eeId~~l~~~ 197 (329)
..+..||+.-| ++.--.+++|+++++++.
T Consensus 405 ~~~~~iRig~~a~t~~g~~~~d~~~~~~~i 434 (490)
T 2a7v_A 405 ITPGGLRLGAPALTSRQFREDDFRRVVDFI 434 (490)
T ss_dssp SSCSEEEEESHHHHHTTCCHHHHHHHHHHH
T ss_pred CCCCceEecccccccCCCCHHHHHHHHHHH
Confidence 12467999655 443345789999999874
No 212
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=95.85 E-value=0.028 Score=56.62 Aligned_cols=53 Identities=21% Similarity=0.143 Sum_probs=36.4
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechh-HHHhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTC-TFENF 62 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~e-I~d~~ 62 (329)
..+|+++|.||++..|...+.-.. .+.|| ++|.++ .| +.+|.++++++ +.+.+
T Consensus 277 ~~~~~~ii~De~y~~~~~~~~s~~----~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~~l~~~l 338 (546)
T 2zy4_A 277 HRPDLMILTDDVYGTFADDFQSLF----AICPENTLLVYSFSKYFGATG-WRLGVVAAHQQNVFDLA 338 (546)
T ss_dssp TCTTCEEEEECTTGGGSTTCCCHH----HHCGGGEEEEEESTTTTTCGG-GCEEEEEEESSCHHHHH
T ss_pred ccCCcEEEEeCcchhhcccCcCHH----HhCCCCEEEEEeCccccCCCC-cceEEEEECCHHHHHHH
Confidence 357999999999998864221111 11244 579996 66 48999998885 76665
No 213
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=95.07 E-value=0.13 Score=49.56 Aligned_cols=173 Identities=10% Similarity=-0.036 Sum_probs=90.8
Q ss_pred cccceEEehhHhhchhccchhhhhcccCCcch-H--HHhhcCCccccceeeechhHHHhhhhhhhccCC--CC-ccchhh
Q psy7882 6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-V--QKDFKGSFWDKLIVHTSTCTFENFIKIKYQILK--TP-AHKLKI 79 (329)
Q Consensus 6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-i--~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~--~~-~hg~T~ 79 (329)
.+|+++++|=||+ +|-. -+-.+.+|+ . + -|.+ |. .-+|++.+++++.+...+....... .. ..+.++
T Consensus 175 ~~~~~~~vD~~q~-~g~~--~id~~~~~~--~~~s~~K~~-gp-~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~ 247 (377)
T 3e77_A 175 VKGAVLVCDMSSN-FLSK--PVDVSKFGV--IFAGAQKNV-GS-AGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLY 247 (377)
T ss_dssp CTTCCEEEECTTT-TTSS--CCCGGGCSE--EEEEGGGTT-SC-TTCEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCS
T ss_pred cCCCEEEEEcccc-cCCC--CCchhhcCE--EEEeccccc-CC-CccEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCC
Confidence 5799999999998 4322 233445554 3 2 2988 32 2468888888875433210000000 00 011111
Q ss_pred h-cc----HHHHHHHHh--hH--HhH-HHHHHHHHHHHHHHHHHHHHhCCcee----eE-EeeceeeEEEeecCCCCCCC
Q psy7882 80 S-DT----VRPHVQIKK--SV--LER-FVHTYVVGNFLLTHLSKLREEFAIVG----DV-RGKGLMIGVDLVQDKETKVP 144 (329)
Q Consensus 80 a-gn----lA~aaala~--~i--le~-le~v~~lG~~L~~gL~eL~~~~p~v~----~V-RG~GLm~gIef~~d~~~~~p 144 (329)
+ -+ .++.++++- +. ++. .++.+++.++|.++|+++ |.+. +- ...+....+.+..-. +
T Consensus 248 ~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~----~g~~~~~~~~~~rs~~ivsf~~~~~~----~ 319 (377)
T 3e77_A 248 NTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNS----QGFYVCPVEPQNRSKMNIPFRIGNAK----G 319 (377)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTS----TTSEECCSCGGGBCSSEEEEEESSTT----C
T ss_pred CCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhc----CCceecCCCHHHcCCcEEEEEcCCCC----C
Confidence 1 12 233333332 11 333 456667777777777654 2111 10 112344666664211 0
Q ss_pred CChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 145 LNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 145 ~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+.+....+...+.++||.+.+.-.....+|+..-... |++|||.+++++
T Consensus 320 -~~~~~~~~l~~l~~~Gi~~~~g~~~~g~iRiS~~~~~---t~edId~l~~al 368 (377)
T 3e77_A 320 -DDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAV---TIEDVQKLAAFM 368 (377)
T ss_dssp -CHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTS---CHHHHHHHHHHH
T ss_pred -chhHHHHHHHHHHHCCcEEeCCCCcCCEEEEECCCCC---CHHHHHHHHHHH
Confidence 1233345778888999988653222356999875444 689999999985
No 214
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=95.02 E-value=0.077 Score=51.50 Aligned_cols=51 Identities=10% Similarity=-0.123 Sum_probs=33.0
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcc-ccceeeechhHHHhhh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFW-DKLIVHTSTCTFENFI 63 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~-PigAv~~~~eI~d~~~ 63 (329)
+|+++|+||++.-. -.+. ....-.| +.|.++|+.. ..|++++++++.+.+.
T Consensus 198 ~g~~livD~a~a~~-~~~~-----p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~ 254 (415)
T 2fq6_A 198 PDAIIMIDNTWAAG-VLFK-----ALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLR 254 (415)
T ss_dssp TTCEEEEECTTTTT-TSSC-----GGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHH
T ss_pred CCCEEEEECCCccc-ccCC-----ccccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHH
Confidence 89999999998622 1111 1122357 3599987532 3588888888776654
No 215
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=94.77 E-value=0.44 Score=46.75 Aligned_cols=179 Identities=9% Similarity=-0.060 Sum_probs=90.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCC-cch-----HHHhhcCCccccceeeechhHH--Hhhhhh-hh---cc-C-
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRF-----VQKDFKGSFWDKLIVHTSTCTF--ENFIKI-KY---QI-L- 70 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PD-----i~KaLgGG~~PigAv~~~~eI~--d~~~~~-~~---~~-~- 70 (329)
..||+.+++|+++.|.-..+..+.....|+ ..| ..|.+++.+ .+|+++++.+-. +.+... .+ .. .
T Consensus 261 ~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~-g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~ 339 (475)
T 3k40_A 261 NKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNF-DCSAMWLKDPSWVVNAFNVDPLYLKHDMQGS 339 (475)
T ss_dssp HHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCS-SCEEEEESSGGGC------------------
T ss_pred HHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCC-ceEEEEEeCHHHHHHHhcCCccccCCCcCCC
Confidence 467999999999876433332222222344 246 349887763 677888776421 222110 00 00 0
Q ss_pred -C---CCccchhhhcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC
Q psy7882 71 -K---TPAHKLKISDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET 141 (329)
Q Consensus 71 -~---~~~hg~T~agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~ 141 (329)
. ......+.... +++.+++.. +-+++ +++..++.+++.++|+++ .....+... ...++.+.+..
T Consensus 340 ~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~g~~l~~~~--~~~iv~f~~~~---- 412 (475)
T 3k40_A 340 APDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVAD-SRFELAAEI--NMGLVCFRLKG---- 412 (475)
T ss_dssp ---------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-TTEEESSCC--BTTEEEEEESS----
T ss_pred CCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEecCC--ceEEEEEEeCC----
Confidence 0 00000111112 344444432 22333 667778888888888764 111112111 22344555432
Q ss_pred CCCCChHHHHHHHHHHHHCCcee-eccCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCKEHGLLL-GRGGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~e~GVLl-~~~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.......+.+.+.++|.+. .+... ....+|+... ....|++||+++++++
T Consensus 413 ----~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~--~~~tt~~di~~~~~~i 464 (475)
T 3k40_A 413 ----SNERNEALLKRINGRGHIHLVPAKIKDVYFLRMAIC--SRFTQSEDMEYSWKEV 464 (475)
T ss_dssp ----CHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECC--CTTCCHHHHHHHHHHH
T ss_pred ----chHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeC--CCCCCHHHHHHHHHHH
Confidence 1234567888888888754 32211 2357888642 2222689999999985
No 216
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=94.41 E-value=0.16 Score=50.19 Aligned_cols=176 Identities=6% Similarity=-0.029 Sum_probs=85.4
Q ss_pred ccccceEEehhHhhchhccch--hhhhccc--CCc----ch--------HHHhhc--CCccccceee---echhHHHhhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT--YLGFQCL--QIC----RF--------VQKDFK--GSFWDKLIVH---TSTCTFENFI 63 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~--~fA~e~~--GV~----PD--------i~KaLg--GG~~PigAv~---~~~eI~d~~~ 63 (329)
..||+++|.||+...+...+. ...+... .+. .| ++|++. .|+ .+|.++ .++++.+.+.
T Consensus 265 ~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~-R~G~~~~~~~~~~l~~~l~ 343 (498)
T 3ihj_A 265 WEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGY-RGGYMEVINLHPEIKGQLV 343 (498)
T ss_dssp HHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSS-CCEEEEEESCCHHHHHHHH
T ss_pred HHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCccc-ceEEEEEecCCHHHHHHHH
Confidence 357999999999987643321 1111110 011 11 469995 474 788777 5888888765
Q ss_pred hhhhccCCCCccchhhhccHHHHHHHHh---------hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeecee
Q psy7882 64 KIKYQILKTPAHKLKISDTVRPHVQIKK---------SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLM 130 (329)
Q Consensus 64 ~~~~~~~~~~~hg~T~agnlA~aaala~---------~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm 130 (329)
.... ....+++.+. .++++++.. +.+++ .+++++..+++.+.|++ +|.+..+...|.|
T Consensus 344 ~~~~----~~~~~~~~~q-~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~~g~~~~~p~gg~ 414 (498)
T 3ihj_A 344 KLLS----VRLCPPVSGQ-AAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQ----VPGIHCNPLQGAM 414 (498)
T ss_dssp HHHH----HSCCCCHHHH-HHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHT----STTEECCCCCBSS
T ss_pred HHHh----ccCCCCHHHH-HHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCcEecCCCeEE
Confidence 3100 0111111111 233333321 11111 23444455555555543 4444333334444
Q ss_pred eE-EEeecCCCC-----CCCCChHHHHH-HHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 131 IG-VDLVQDKET-----KVPLNSRHMTH-ILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 131 ~g-Ief~~d~~~-----~~p~~~~~~~~-~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+. +.+..+... ....+. ... +...+.++||++.+.. ...+.+|+.- . +++++++++++.+
T Consensus 415 ~~~~~l~~p~~~~~~~~~~g~~~--~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~--~---~~~e~l~~~i~~L 486 (498)
T 3ihj_A 415 YAFPRIFIPAKAVEAAQAHQMAP--DMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTI--L---PPVEKLKTVLQKV 486 (498)
T ss_dssp EECCEECCCHHHHHHHHHTTSCH--HHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEEC--C---SCHHHHHHHHHHH
T ss_pred EEEEeccCchhhhHHHHhcCCCc--HHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEe--C---CCHHHHHHHHHHH
Confidence 33 244211000 000000 112 3455667899998732 1235788865 1 3689999999875
No 217
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=94.03 E-value=0.17 Score=49.07 Aligned_cols=138 Identities=8% Similarity=-0.086 Sum_probs=73.3
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFIKIKYQILKTPAHKLKIS 80 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a 80 (329)
+|+++|+||++.-+ .. ..+......| +.|.++|+..|. |.+++++++.+.+........-....+.+.+
T Consensus 194 ~~~~livD~a~~~~-~~----~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~ 268 (409)
T 3jzl_A 194 PEVIVFVDNCYGEF-VE----YQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLY 268 (409)
T ss_dssp TTCEEEEECTTCTT-TS----SCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTT
T ss_pred CCCEEEEeCCcccc-cc----cCCccccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHH
Confidence 89999999996432 10 0111122346 459999876565 7788898888876531000000001122222
Q ss_pred ccHHHHHHHHhhHHhH-HHHHHHHHHHHHHHHHHHHHh-CCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHH
Q psy7882 81 DTVRPHVQIKKSVLER-FVHTYVVGNFLLTHLSKLREE-FAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCK 158 (329)
Q Consensus 81 gnlA~aaala~~ile~-le~v~~lG~~L~~gL~eL~~~-~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~ 158 (329)
.+.++..++.+ +.. +++..+...++.+.|+++--+ +|. ..-.+..+++.|.+.+ .+...++++.+.
T Consensus 269 ~~~~~l~gl~~--~~~r~~~~~~~a~~la~~L~~~g~~v~p~-~~~~~~~~i~~i~l~~---------~~~~~~~~~~L~ 336 (409)
T 3jzl_A 269 SLLEMYQGFFL--APHVTAQAIKGARFTAAMLAEFGVEADPV-WDAPRTDLIQSVSFHN---------KEKMVAFAQAIQ 336 (409)
T ss_dssp CHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCEEESC-TTSCCSSSCCEEECSC---------HHHHHHHHHHHH
T ss_pred HHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHhCCCcccCC-CCCCCccEEEEEEeCC---------HHHHHHHHHHHH
Confidence 22233334433 111 556667777777777664110 111 1112344588888852 245677888888
Q ss_pred HCC
Q psy7882 159 EHG 161 (329)
Q Consensus 159 e~G 161 (329)
+..
T Consensus 337 ~~~ 339 (409)
T 3jzl_A 337 AAS 339 (409)
T ss_dssp HTS
T ss_pred hcC
Confidence 764
No 218
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=94.01 E-value=1.2 Score=43.13 Aligned_cols=178 Identities=9% Similarity=-0.135 Sum_probs=89.2
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCC-cch-----HHHhhcCCccccceeeechhH--HHhhhh-hhh--ccC---
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRF-----VQKDFKGSFWDKLIVHTSTCT--FENFIK-IKY--QIL--- 70 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PD-----i~KaLgGG~~PigAv~~~~eI--~d~~~~-~~~--~~~--- 70 (329)
..||+++++|+++.|+-....-+.....|+ ..| ..|.++.. +.+|+++++++- .+.+.. ..+ ...
T Consensus 262 ~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p-~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~ 340 (486)
T 1js3_A 262 HEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVN-FDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGS 340 (486)
T ss_dssp HHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESCHHHHHGGGC------------C
T ss_pred HHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCC-cceEEEEEeCHHHHHHHhcCCchhhCCCcccc
Confidence 468999999999987543221111111233 134 45988765 377888887652 233311 000 000
Q ss_pred ---CCCcc---chhhhcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecC
Q psy7882 71 ---KTPAH---KLKISDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQD 138 (329)
Q Consensus 71 ---~~~~h---g~T~agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d 138 (329)
....+ ..+.... +++.++++. +-+++ +++..++.+++.+.|+++ |.+.-+ .-.+.++.+.+..
T Consensus 341 ~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~- 415 (486)
T 1js3_A 341 GLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQD----PRFEVCAEVTLGLVCFRLKG- 415 (486)
T ss_dssp CSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----TTEEECSCCCSSEEEEEESS-
T ss_pred cCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEeCCCceeEEEEEecC-
Confidence 00000 0011112 444444432 23333 566777777777777653 322111 1124455555431
Q ss_pred CCCCCCCChHHHHHHHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 139 KETKVPLNSRHMTHILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 139 ~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.......+...|.++|++....+. ....+|+.-. ....+++||+++++++
T Consensus 416 -------~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~--~~~~t~~di~~~~~~l 467 (486)
T 1js3_A 416 -------SDGLNEALLERINSARKIHLVPCRLRGQFVLRFAIC--SRKVESGHVRLAWEHI 467 (486)
T ss_dssp -------CHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECC--CTTCCHHHHHHHHHHH
T ss_pred -------hHHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeC--CCCCCHHHHHHHHHHH
Confidence 012346688888888865432111 2357887631 1122689999999975
No 219
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=93.94 E-value=0.63 Score=45.54 Aligned_cols=179 Identities=12% Similarity=-0.064 Sum_probs=91.0
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCC-cch-----HHHhhcCCccccceeeechhHH-H-hhhh-hhhccCC----
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRF-----VQKDFKGSFWDKLIVHTSTCTF-E-NFIK-IKYQILK---- 71 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PD-----i~KaLgGG~~PigAv~~~~eI~-d-~~~~-~~~~~~~---- 71 (329)
.+||+.+++|+.+.|+...+..+.....|+ ..| ..|.+++-+ .+|+++++++-. . .+.. ..+-...
T Consensus 268 ~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~ 346 (481)
T 4e1o_A 268 AREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHF-DCTGFWVKDKYKLQQTFSVNPIYLRHANSGV 346 (481)
T ss_dssp HHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCS-SCEEEEESBHHHHHTTTCCCCGGGCCTTTTT
T ss_pred HHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCC-ceEEEEEeCHHHHHHHhcCCchhccCcccCC
Confidence 467999999999887643333233323455 236 359987653 677787776532 1 1110 0000000
Q ss_pred --CC---ccchhhhcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC
Q psy7882 72 --TP---AHKLKISDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET 141 (329)
Q Consensus 72 --~~---~hg~T~agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~ 141 (329)
.. ....+.... +++.+++.. +-+++ +++..++.++|.++|+++- ....+... ...++.+.+..
T Consensus 347 ~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-g~~~~~~~--~~~~v~f~~~~---- 419 (481)
T 4e1o_A 347 ATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDP-SFEIPAKR--HLGLVVFRLKG---- 419 (481)
T ss_dssp SCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT-TEECCSCC--CSSEEEEEESS----
T ss_pred CCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--ceeEEEEEeCC----
Confidence 00 000111112 344444432 23333 6677778888877776531 11111111 12344454421
Q ss_pred CCCCChHHHHHHHHHHHHCCce-eeccCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCKEHGLL-LGRGGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~e~GVL-l~~~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.......+.+.+.++|.+ +.+... ....+|+... ....|++||+++++++
T Consensus 420 ----~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~--~~~tt~~di~~~~~~i 471 (481)
T 4e1o_A 420 ----PNSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVT--SQFTTRDDILRDWNLI 471 (481)
T ss_dssp ----CHHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECC--CTTCCHHHHHHHHHHH
T ss_pred ----chHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeC--CCCCCHHHHHHHHHHH
Confidence 123456788889888844 333211 2357887642 2222689999999985
No 220
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=93.62 E-value=1 Score=44.57 Aligned_cols=186 Identities=10% Similarity=-0.101 Sum_probs=92.0
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCC-cch-----HHHhhcCCccccceeeechh-HHHhhhhhhhccCC-CC---
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRF-----VQKDFKGSFWDKLIVHTSTC-TFENFIKIKYQILK-TP--- 73 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PD-----i~KaLgGG~~PigAv~~~~e-I~d~~~~~~~~~~~-~~--- 73 (329)
..||+.+++|+++.|.-....-+.....|+ ..| ..|.+++. ..+|+++++.+ .............. ..
T Consensus 275 ~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 353 (511)
T 3vp6_A 275 EKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMHASYLFQQDKHY 353 (511)
T ss_dssp HHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCTTTCCSSCSS
T ss_pred HHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHhccCCccccCccccc
Confidence 467999999999887533222122222243 235 34988765 35677877664 44432110000000 00
Q ss_pred ---------ccchhhhcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE---eeceeeEEEee
Q psy7882 74 ---------AHKLKISDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR---GKGLMIGVDLV 136 (329)
Q Consensus 74 ---------~hg~T~agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR---G~GLm~gIef~ 136 (329)
....+-... +++.+++.. +-+++ +++..++.+++.+.|+++ |.+.-+. -...++.+.+.
T Consensus 354 ~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~----pg~~l~~~~~p~~~~v~f~~~ 429 (511)
T 3vp6_A 354 DVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNR----EEFEMVFNGEPEHTNVCFWYI 429 (511)
T ss_dssp CGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC----TTEEESSSSCCSSSCEEEEEC
T ss_pred ccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC----CCEEEEecCCCCeEEEEEEEe
Confidence 000010112 444444443 23333 667778888888877653 3221111 23344555553
Q ss_pred cCCCCCCCCCh-------HHHHHHHHHHHHCCceeecc---CCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 137 QDKETKVPLNS-------RHMTHILDSCKEHGLLLGRG---GLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 137 ~d~~~~~p~~~-------~~~~~~~~~l~e~GVLl~~~---G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+......+-+. .....+.+.|.++|+++... +...+.+|+.. ....++++||+.+++++
T Consensus 430 p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~--~~~~~t~~di~~ll~~i 498 (511)
T 3vp6_A 430 PQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVI--SNPAATQSDIDFLIEEI 498 (511)
T ss_dssp CGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECC--CCTTCCHHHHHHHHHHH
T ss_pred CccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEe--cCCCCCHHHHHHHHHHH
Confidence 22110000001 12346888999999755431 11124688864 12234689999999874
No 221
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=93.59 E-value=1 Score=44.43 Aligned_cols=87 Identities=10% Similarity=-0.039 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCceeeEEe--eceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC-----
Q psy7882 97 FVHTYVVGNFLLTHLSKLREEFAIVGDVRG--KGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL----- 169 (329)
Q Consensus 97 le~v~~lG~~L~~gL~eL~~~~p~v~~VRG--~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~----- 169 (329)
.++..++.++|.+.|+++ +.+.-+.. ...++.+.+..+.. ++ ...+.+.|.++|+++..+..
T Consensus 344 ~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~~v~f~~~~~~~----~~---~~~l~~~L~~~Gi~v~~~~~p~~~~ 412 (502)
T 3hbx_A 344 MENCRENMIVLREGLEKT----ERFNIVSKDEGVPLVAFSLKDSSC----HT---EFEISDMLRRYGWIVPAYTMPPNAQ 412 (502)
T ss_dssp HHHHHHHHHHHHHHHHTT----TCEEECSCSSSSSEEEEEESSCSS----CC---HHHHHHHHHTTTCBCCEEECCTTCT
T ss_pred HHHHHHHHHHHHHHHHhC----CCEEEEeCCCCceEEEEEecCCCc----CC---HHHHHHHHHhCCcEEeeccCCcccC
Confidence 566777777777777654 32211111 23456666642211 11 23688889999998753211
Q ss_pred CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 170 SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 170 ~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
....+|+..-. .+|++|++.+++.+
T Consensus 413 ~~~~lRisv~~---~~t~edid~li~~L 437 (502)
T 3hbx_A 413 HITVLRVVIRE---DFSRTLAERLVIDI 437 (502)
T ss_dssp TCEEEEEECCT---TCCHHHHHHHHHHH
T ss_pred CceEEEEEeCC---CCCHHHHHHHHHHH
Confidence 23578887543 34689999999975
No 222
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=93.38 E-value=0.79 Score=48.03 Aligned_cols=43 Identities=14% Similarity=0.100 Sum_probs=33.1
Q ss_pred HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+..+.+.|.++||++...+ ...+++...+-. |+++++.+++++
T Consensus 517 ~~~l~~~L~e~GI~v~~~~--~~~ir~~~s~g~---t~e~i~~Ll~aL 559 (730)
T 1c4k_A 517 ATIVANYLRDHGIIPEKSD--LNSILFLMTPAE---TPAKMNNLITQL 559 (730)
T ss_dssp HHHHHHHHHHTTCCCSEEC--SSEEEEECCTTC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEEECC--CCeEEEEeCCCC---CHHHHHHHHHHH
Confidence 4567888889999998764 467788765544 689999999974
No 223
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=92.93 E-value=1 Score=43.05 Aligned_cols=84 Identities=11% Similarity=-0.064 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCcee--eccC-CCCC
Q psy7882 97 FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLL--GRGG-LSGN 172 (329)
Q Consensus 97 le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl--~~~G-~~~n 172 (329)
.++..++.+++.++|+++ +.+ .+.+. ..+..+.+..+. ....+.+.|.++||.+ .+.. ...+
T Consensus 346 ~~~~~~~~~~l~~~L~~~----~g~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~L~~~gi~v~~~~~~~~~~~ 411 (438)
T 1wyu_A 346 ALKSVEMAHKLHALLLEV----PGV-RPFTPKPFFNEFALALPK---------DPEAVRRALAERGFHGATPVPREYGEN 411 (438)
T ss_dssp HHHHHHHHHHHHHHHTTS----TTC-EECSCSSBCSEEEEECSS---------CHHHHHHHHHHTTCCCCEECCTTSCSS
T ss_pred HHHHHHHHHHHHHHHhcC----CCe-EECCCCCeEEEEEEeCCC---------CHHHHHHHHHHCCceeccccccccCCC
Confidence 455666667776666543 211 22222 233333332110 1346888899999998 3321 1257
Q ss_pred EEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 173 TLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 173 vIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.+|+.+.... |++|++++++++
T Consensus 412 ~lRis~~~~~---t~edi~~~~~~l 433 (438)
T 1wyu_A 412 LALFAATELH---EEEDLLALREAL 433 (438)
T ss_dssp EEEEECCTTC---CHHHHHHHHHHH
T ss_pred eEEEEecccC---CHHHHHHHHHHH
Confidence 8999886544 689999999875
No 224
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=92.37 E-value=2.9 Score=40.05 Aligned_cols=176 Identities=9% Similarity=-0.031 Sum_probs=86.5
Q ss_pred ccceEEehhHhhchhc---cchh-hhhcccCCcch-----HHHhhcCCccccceeeechh-HH-Hhhhh-hhhccCC--C
Q psy7882 7 RDCGVVVSAVDFGSGD---NGTY-LGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTC-TF-ENFIK-IKYQILK--T 72 (329)
Q Consensus 7 ~giLLI~DEVqTGfGR---TG~~-fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~e-I~-d~~~~-~~~~~~~--~ 72 (329)
+|+++++||++.|+.. .+.. +..+.. .-| ..|.+.+| ..+|+++++++ .. +.+.. ..+-... .
T Consensus 222 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~hK~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (452)
T 2dgk_A 222 IDIDMHIDAASGGFLAPFVAPDIVWDFRLP--RVKSISASGHKFGLAP-LGCGWVIWRDEEALPQELVFNVDYLGGQIGT 298 (452)
T ss_dssp CCCCEEEECTTGGGTHHHHCTTCCCSTTST--TEEEEEEETTTTTCCC-SSCEEEEESSGGGSCGGGCEEECCTTCCEEE
T ss_pred CCCcEEEEcccHHHHHHhhCccchhhcCCC--CCcEEEECcccccCCC-CCeEEEEEcCHHHHHHHhccCccccCCCCCC
Confidence 5999999999988632 1110 111111 234 23866565 37888988754 32 33311 0000000 0
Q ss_pred Cccchhhhc-c-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-E----eeceeeEEEeecCCCC
Q psy7882 73 PAHKLKISD-T-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-R----GKGLMIGVDLVQDKET 141 (329)
Q Consensus 73 ~~hg~T~ag-n-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-R----G~GLm~gIef~~d~~~ 141 (329)
+....|-.+ . ++..++++. +-+++ .++..++.++|.+.|++ .+.+.-+ . ..+.++.+.+.....
T Consensus 299 ~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~~~~~v~f~~~~~~~- 373 (452)
T 2dgk_A 299 FAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAK----LGPYEFICTGRPDEGIPAVCFKLKDGED- 373 (452)
T ss_dssp CCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TSSEEEEEECCTTTBSSEEEEEECTTCC-
T ss_pred cccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh----CCCeEEecCCCCCCCeEEEEEEecCccc-
Confidence 000111112 2 333333332 22333 55666666777666654 3422111 1 134456666642110
Q ss_pred CCCCChHHHHHHHHHHHHCCceeecc----C-CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCKEHGLLLGRG----G-LSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~e~GVLl~~~----G-~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..++ ...+.+.|.++|+++..+ . .....+|+..--. .|++|+|.+++++
T Consensus 374 -~~~~---~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~---~t~e~id~li~~l 427 (452)
T 2dgk_A 374 -PGYT---LYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRG---FEMDFAELLLEDY 427 (452)
T ss_dssp -CSCC---HHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTT---CCHHHHHHHHHHH
T ss_pred -ccCC---HHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCC---CCHHHHHHHHHHH
Confidence 0011 246888899999975432 1 1234788865332 3689999999985
No 225
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=91.81 E-value=1.9 Score=45.18 Aligned_cols=42 Identities=12% Similarity=-0.036 Sum_probs=30.1
Q ss_pred HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
..+...|.++||.+..++ .+.++++..+-. |+++++.+++++
T Consensus 557 ~~l~~~L~~~gI~~e~~~--~~~v~~~~~~g~---t~~~~~~l~~al 598 (755)
T 2vyc_A 557 ALVTAWLGRHGIVPTRTT--DFQIMFLFSMGV---TRGKWGTLVNTL 598 (755)
T ss_dssp HHHHHHHHTTTCCCSEEC--SSEEEEECCTTC---CTTTTHHHHHHH
T ss_pred HHHHHHHHHCCCEEeecC--CCeEEEEECCCC---CHHHHHHHHHHH
Confidence 456677888999987654 567777766655 467888888864
No 226
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=91.66 E-value=2.4 Score=40.31 Aligned_cols=166 Identities=10% Similarity=-0.008 Sum_probs=87.5
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcchH---H--HhhcCCccccceeeechhHHHhhhhh-hhccCC------CCc
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV---Q--KDFKGSFWDKLIVHTSTCTFENFIKI-KYQILK------TPA 74 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi---~--KaLgGG~~PigAv~~~~eI~d~~~~~-~~~~~~------~~~ 74 (329)
+|+++++|-||+ +|.. -+-.+ ..|+ + |.+ | -.-+|++.+++++.+.+.+. ...... ...
T Consensus 163 ~~~~~~vD~~q~-~g~~--~id~~----~~d~~~~s~~K~~-g-p~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 233 (361)
T 3m5u_A 163 TKTPLIVDASSD-FFSR--KVDFS----NIALFYGGVQKNA-G-ISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQS 233 (361)
T ss_dssp CSSCEEEECGGG-TTSS--CCCCT----TEEEEEEETTTTS-S-CTTCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTT
T ss_pred cCCEEEEEcccc-cCCC--CCCcc----cCCEEEEechhcc-C-CCccEEEEEcHHHHhhhcCCCCCceeehHHHhhcCC
Confidence 389999999998 4322 11111 1362 1 988 3 22378999999987655320 000000 000
Q ss_pred cchhhhcc--HHHHHHHHh--hH--HhH-HHHHHHHHHHHHHHHHHHHHhCCce----e--eEEeeceeeEEEeecCCCC
Q psy7882 75 HKLKISDT--VRPHVQIKK--SV--LER-FVHTYVVGNFLLTHLSKLREEFAIV----G--DVRGKGLMIGVDLVQDKET 141 (329)
Q Consensus 75 hg~T~agn--lA~aaala~--~i--le~-le~v~~lG~~L~~gL~eL~~~~p~v----~--~VRG~GLm~gIef~~d~~~ 141 (329)
..+|-+-. .++.++++- +. ++. .++.+++.++|.++|+++ +.+ . +-| ...+..+.+....
T Consensus 234 ~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~----~g~~~~~~~~~~r-s~~ivsf~~~~~~-- 306 (361)
T 3m5u_A 234 LFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLS----NGFYKGHADKKDR-SLMNVSFNIAKNK-- 306 (361)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTS----TTSEEESSCGGGB-CSSEEEEEESSCT--
T ss_pred CCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHC----CCeeeccCCHHHc-CCeEEEEECCCch--
Confidence 01121111 333444432 22 333 456667777777777654 311 1 111 1234566653201
Q ss_pred CCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 142 KVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 142 ~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
.....+...|.++||.+...-..-..+|+.+-... |++|||.+++++
T Consensus 307 ------~~~~~~~~~L~~~gI~~~~g~~~~g~iRiS~~~~~---t~edId~l~~al 353 (361)
T 3m5u_A 307 ------DLEPLFVKEAEEAGMIGLKGHRILGGIRASIYNAL---NLDQVKTLCEFM 353 (361)
T ss_dssp ------THHHHHHHHHHHTTEECCBCCTTTCSEEEECCTTS---CHHHHHHHHHHH
T ss_pred ------hhhHHHHHHHHHCCCEEecCCCccCeEEEEccCCC---CHHHHHHHHHHH
Confidence 11135777888999988653112256999875444 689999999985
No 227
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=91.43 E-value=1.2 Score=43.39 Aligned_cols=152 Identities=7% Similarity=-0.035 Sum_probs=79.3
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhhhhhhccCCCCccchh--
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFIKIKYQILKTPAHKLK-- 78 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~~~~~~~hg~T-- 78 (329)
+|+++|+||++.-+..... ......| +.|.++|+..|. |.+++++++.+.+..... ....+.+
T Consensus 211 ~g~~livD~a~~~~~~~~~-----p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~----~~~~g~~~~ 281 (427)
T 3i16_A 211 KDIICFVDNCYGEFMDTKE-----PTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLT----VPGIGGECG 281 (427)
T ss_dssp TTSEEEEECTTTTTSSSSC-----GGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHS----CTTTGGGCC
T ss_pred CCCEEEEECCCccccccCC-----ccccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcc----cCccCccCC
Confidence 7999999999763311111 1111236 469999876564 778889888887653100 0111222
Q ss_pred --hhccHHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCc-e---eeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882 79 --ISDTVRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAI-V---GDVRGKGLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 79 --~agnlA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~-v---~~VRG~GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
+..+..+..++.+ ... +++..+...++.+.|+++ +. + ..-.+..+++.|.+.. .+.+.
T Consensus 282 ~~~~~a~~~l~gl~~~~~r--~~~~~~~a~~la~~L~~~----g~~V~p~~~~~~~~~i~~i~l~~---------~~~~~ 346 (427)
T 3i16_A 282 STFGVVRSMYQGLFLAPHI--SMEALKGAILCSRIMELA----GFEVMPKYDEKRSDIIQSIKFND---------KDKLI 346 (427)
T ss_dssp CCTTCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHT----TCEEESCTTSCCSSSCEEEECSS---------HHHHH
T ss_pred ccHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhC----CCeecCCCCCCCccEEEEEEECC---------HHHHH
Confidence 3222233334433 111 455666666777766654 32 1 0112234488888852 24567
Q ss_pred HHHHHHHHC---Cceeec-----cCCCCCEEEEeCcccc
Q psy7882 152 HILDSCKEH---GLLLGR-----GGLSGNTLTALQPKLL 182 (329)
Q Consensus 152 ~~~~~l~e~---GVLl~~-----~G~~~nvIrl~PPL~I 182 (329)
+|++.+... +.++.| .|....+|.-.-.|+-
T Consensus 347 ~f~~~l~~~~~~~s~~~p~~~~~~gy~~~~~~~~~~~~~ 385 (427)
T 3i16_A 347 EFCKGIQTGSPIDSFVSCEPWDMPGYTDQVIMAAGAFIQ 385 (427)
T ss_dssp HHHHHHHHTCSSSTTSCCCCBCC---CCCEEEEECCSST
T ss_pred HHHHHHhhcCcccccccCcCCCCCCCCCceeeccCcCCC
Confidence 788888776 333332 1334455554444443
No 228
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=90.64 E-value=1.8 Score=42.18 Aligned_cols=130 Identities=5% Similarity=-0.054 Sum_probs=69.9
Q ss_pred ccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhhhhhhccCCCCccch---
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFIKIKYQILKTPAHKL--- 77 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~~~~~~~hg~--- 77 (329)
+|+++|+||++..+..... ......| +.|.++|+..|. |.+++++++.+.+..... ....+.
T Consensus 211 ~g~~livD~a~~~~~~~~~-----p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~----~~~~g~~~~ 281 (427)
T 3hvy_A 211 ENVIVFVDNCYGEFVEEKE-----PTDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVT----VPGIGGECG 281 (427)
T ss_dssp SSSEEEEECTTCTTTSSSC-----GGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHS----CTTTGGGCC
T ss_pred CCCEEEEECCccccccCCC-----CcccCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhh----cCCcccccC
Confidence 7999999999753311111 1112236 469999876565 677788888887653100 011121
Q ss_pred -hhhccHHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCc-e---eeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882 78 -KISDTVRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAI-V---GDVRGKGLMIGVDLVQDKETKVPLNSRHMT 151 (329)
Q Consensus 78 -T~agnlA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~-v---~~VRG~GLm~gIef~~d~~~~~p~~~~~~~ 151 (329)
++..+..+..++.+ ... +++..+...++.+.|+++ +. + ..-.+..+++.|.+.. .+...
T Consensus 282 ~~~~~a~~~~~gl~~~~~r--~~~~~~~a~~la~~L~~~----g~~V~p~~~~~~~~li~~~~l~~---------~~~~~ 346 (427)
T 3hvy_A 282 STFGVMRSLYEGLFMAPHV--TIEAVKGAVFCARIMELA----GFDVLPKYNDKRTDIIQAIKFND---------EKKLI 346 (427)
T ss_dssp CCTTCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHT----TCEEESCTTSCCSSSEEEEECSS---------HHHHH
T ss_pred CCHHHHHHHHHhHhHHHHH--HHHHHHHHHHHHHHHHhC----CCeecCCCCCCCceEEEEEeCCC---------HHHHH
Confidence 22222223333433 111 556666677777776654 32 1 0112234488888852 24566
Q ss_pred HHHHHHHHC
Q psy7882 152 HILDSCKEH 160 (329)
Q Consensus 152 ~~~~~l~e~ 160 (329)
++++.+...
T Consensus 347 ~f~~~l~~~ 355 (427)
T 3hvy_A 347 DFIKGIQTA 355 (427)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHhccc
Confidence 788887765
No 229
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=90.36 E-value=0.64 Score=43.97 Aligned_cols=145 Identities=8% Similarity=-0.012 Sum_probs=70.3
Q ss_pred ccceEEehhHhhchhccchhhhhccc-CCcch---H----HHhhcCCccccceeeec-hhHHHhhhhh-hhccCCC---C
Q psy7882 7 RDCGVVVSAVDFGSGDNGTYLGFQCL-QICRF---V----QKDFKGSFWDKLIVHTS-TCTFENFIKI-KYQILKT---P 73 (329)
Q Consensus 7 ~giLLI~DEVqTGfGRTG~~fA~e~~-GV~PD---i----~KaLgGG~~PigAv~~~-~eI~d~~~~~-~~~~~~~---~ 73 (329)
||+++|.|++|+ +|-. +..... +.-.| + .|.+++| ..|+++++ +++.+.+..- ..+.... .
T Consensus 154 ~~~~vi~D~a~a-~g~~---~~~~~~g~~~~d~~~~S~~~~K~l~~g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~ 227 (377)
T 3ju7_A 154 KGVPVVVDAAPG-FGLM---NGGMHYGQDFSGMIIYSFHATKPFGIG--EGGLIYSKNEEDIQRIKRMGNFGFDTNRECT 227 (377)
T ss_dssp TTCCBEEECTTC-TTCE---ETTEETTTTCSSEEEEECBTTSSSCCB--SCEEEEESCHHHHHHHHHHTBTTBCTTSCBC
T ss_pred cCCEEEEECCCc-cCCe---ECCEeccCCCCcEEEEECCCCCcCCCC--CcEEEEECCHHHHHHHHHHHhcCCCCCCcee
Confidence 799999999997 4322 111223 22245 2 3999875 34556554 5666554420 0110000 0
Q ss_pred ccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHh-CCceee-EE-eeceeeEEEeecCCCCCCCCCh
Q psy7882 74 AHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREE-FAIVGD-VR-GKGLMIGVDLVQDKETKVPLNS 147 (329)
Q Consensus 74 ~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~-~p~v~~-VR-G~GLm~gIef~~d~~~~~p~~~ 147 (329)
..|..+.-+ +.++.++.. +.++. .++.+++.+++.+.|+++-.- .+.... -. ..-.++.+.+.. .
T Consensus 228 ~~g~~~~~~~~~aa~~~~~l~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------- 298 (377)
T 3ju7_A 228 MMGFNCKMSEYAAAIGIATMKKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPE-E-------- 298 (377)
T ss_dssp SSCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCT-T--------
T ss_pred eccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCC-h--------
Confidence 112223333 444444443 33333 667777888888877764210 011100 00 011122333321 1
Q ss_pred HHHHHHHHHHHHCCceeec
Q psy7882 148 RHMTHILDSCKEHGLLLGR 166 (329)
Q Consensus 148 ~~~~~~~~~l~e~GVLl~~ 166 (329)
.....+.+.|.++||.++.
T Consensus 299 ~~~~~l~~~L~~~gI~~~~ 317 (377)
T 3ju7_A 299 VRNKQVIEDLKKQKIEARL 317 (377)
T ss_dssp SCHHHHHHHHHTTTBCCBC
T ss_pred hhHHHHHHHHHHCCCceec
Confidence 0145688999999998765
No 230
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=84.76 E-value=0.8 Score=44.59 Aligned_cols=18 Identities=11% Similarity=0.080 Sum_probs=15.3
Q ss_pred ccccceEEehhHhhchhc
Q psy7882 5 YYRDCGVVVSAVDFGSGD 22 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGR 22 (329)
..+++++|+||+..||.-
T Consensus 220 ~~~~~~~~~D~~Y~~~~~ 237 (420)
T 4h51_A 220 LAKHHQVFFDSAYQGYAS 237 (420)
T ss_dssp HHHTCEEEEEESCTTTTT
T ss_pred HhcCceEeeehhhhhhcc
Confidence 457999999999999953
No 231
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=84.32 E-value=9.8 Score=36.31 Aligned_cols=40 Identities=8% Similarity=-0.311 Sum_probs=27.7
Q ss_pred HHHHHH-HCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 153 ILDSCK-EHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 153 ~~~~l~-e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
++..++ ++||++.++.. ..+.+|+... . +++++++.++.+
T Consensus 375 ~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~--~---~~e~l~~~l~~l 418 (427)
T 2hox_A 375 DCYQTFQNGRINTQNGVGFEASSRYVRLSLI--K---TQDDFDQLMYYL 418 (427)
T ss_dssp SHHHHHHHTTEECEEGGGGTSCTTEEEEECS--S---CHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEcCCCccCCCCCEEEEEec--C---CHHHHHHHHHHH
Confidence 555554 79999987421 2468998754 1 578899988864
No 232
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=81.67 E-value=3.8 Score=41.13 Aligned_cols=142 Identities=11% Similarity=0.019 Sum_probs=78.3
Q ss_pred ccccceEEehhHhhchhccchhhhhcccCC-cchH-----HHhhcCCccccce-ee-e-chhHHHhhhhhhhccCCCCcc
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRFV-----QKDFKGSFWDKLI-VH-T-STCTFENFIKIKYQILKTPAH 75 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PDi-----~KaLgGG~~PigA-v~-~-~~eI~d~~~~~~~~~~~~~~h 75 (329)
..||+.+++||-.-+.-+...-+..+.+.. ..|+ =|-+ ++|++. ++ + .++.++.+.. ..
T Consensus 243 h~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~l---lvpIGG~ii~~~d~e~l~~~~~---------~y 310 (501)
T 3hl2_A 243 ANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNF---MVPVGGAIIAGFNDSFIQEISK---------MY 310 (501)
T ss_dssp HHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHH---CCCSSCEEEEESCHHHHHHHHH---------TS
T ss_pred HHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccc---eeecCceEEEeCCHHHHHHHHH---------hC
Confidence 357999999985544432222222222222 3662 1664 678854 33 2 4456665542 11
Q ss_pred chhhhcc--HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCC-ceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882 76 KLKISDT--VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFA-IVGDVRGKGLMIGVDLVQDKETKVPLNSR 148 (329)
Q Consensus 76 g~T~agn--lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p-~v~~VRG~GLm~gIef~~d~~~~~p~~~~ 148 (329)
++|-++. +.+..++.. +-+.+ +++..++.++|++.|+++...++ .+.+...--.-+++.+...... . ..
T Consensus 311 PGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~-~---~~ 386 (501)
T 3hl2_A 311 PGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEH-R---DK 386 (501)
T ss_dssp CSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTT-T---SC
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccccccc-c---cc
Confidence 1222233 323333322 44555 78889999999999999998776 3556665666677777532111 0 11
Q ss_pred HHHHHHHHHHHCCc
Q psy7882 149 HMTHILDSCKEHGL 162 (329)
Q Consensus 149 ~~~~~~~~l~e~GV 162 (329)
....+-..|+.++|
T Consensus 387 ~~t~~gs~Lf~r~v 400 (501)
T 3hl2_A 387 AVTQLGSMLFTRQV 400 (501)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHhcCC
Confidence 24456666776654
No 233
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=80.81 E-value=0.81 Score=44.06 Aligned_cols=57 Identities=9% Similarity=-0.023 Sum_probs=33.5
Q ss_pred ccccceEEehhHhhchhccch---hhhhccc-CCcch------HHHhhc-CCccccceee---echhHHHhh
Q psy7882 5 YYRDCGVVVSAVDFGSGDNGT---YLGFQCL-QICRF------VQKDFK-GSFWDKLIVH---TSTCTFENF 62 (329)
Q Consensus 5 ~~~giLLI~DEVqTGfGRTG~---~fA~e~~-GV~PD------i~KaLg-GG~~PigAv~---~~~eI~d~~ 62 (329)
..||+++|.||+..+|...+. ......+ ...+. ++|.++ .|. -+|.++ ..+++.+.+
T Consensus 204 ~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~Gl-RiG~~~~~~~~~~~~~~~ 274 (405)
T 3k7y_A 204 LHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGE-RAGALHIVCKNQEEKKIV 274 (405)
T ss_dssp HHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTT-TEEEEEEECSSHHHHHHH
T ss_pred HHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccc-cceEEEEEeCCHHHHHHH
Confidence 357999999999998853221 1111111 11122 579998 774 788764 356665544
No 234
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=65.84 E-value=27 Score=36.38 Aligned_cols=43 Identities=16% Similarity=0.170 Sum_probs=28.1
Q ss_pred HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882 150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE 197 (329)
Q Consensus 150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~ 197 (329)
+..+.+.|.++||.+..++ ..+++-+.++ -. ++++++.+++++
T Consensus 511 g~~~~~~L~~~~I~~E~~d-~~~vl~l~s~-g~---~~~~~~~L~~aL 553 (715)
T 3n75_A 511 ASIVAKYLDEHGIVVEKTG-PYNLLFLFSI-GI---DKTKALSLLRAL 553 (715)
T ss_dssp HHHHHHHHHHTTCCCSEEE-TTEEEEECCT-TC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEecC-CCcEEEEeCC-CC---CHHHHHHHHHHH
Confidence 3456677788999987764 2344444333 22 578899988874
No 235
>3pk1_B Apoptosis regulator BAX; BCL-2 family fold, regulation of apoptosis, mitochondri apoptosis-apoptosis regulator complex; 2.49A {Homo sapiens} PDB: 3pl7_C 2xa0_C
Probab=44.93 E-value=18 Score=22.86 Aligned_cols=30 Identities=23% Similarity=0.351 Sum_probs=23.9
Q ss_pred CCCCchhhhhhHHHHHHHHHHhhhhHHHHH
Q psy7882 282 NPSDPKLKELNYTIRKMVYEYKKNKWLEHL 311 (329)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (329)
-|+||..|++---+++.--|...|-=|.|+
T Consensus 3 ~~~Dp~~K~l~~cL~~IgDEld~N~ELQrm 32 (34)
T 3pk1_B 3 VPQDASTKKLSECLKRIGDELDSNMELQRM 32 (34)
T ss_dssp ----CTHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCccHHHHHHHHHHHHHHHcccHHHHHh
Confidence 489999999999999999999999888775
No 236
>2wh0_Q Pkcev3, protein kinase C epsilon type, NPKC-epsilon; tandem binding, phosphoprotein, signaling protein, 14-3-3, cytoplasm, acetylation; HET: SEP; 2.25A {Homo sapiens}
Probab=43.61 E-value=11 Score=22.85 Aligned_cols=22 Identities=41% Similarity=0.623 Sum_probs=18.7
Q ss_pred cccCCCCCchhhhhhHHHHHHH
Q psy7882 278 LRSTNPSDPKLKELNYTIRKMV 299 (329)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~ 299 (329)
-..|.|-|..+|||.-.|||.+
T Consensus 5 saptspcdqeikelennirkal 26 (31)
T 2wh0_Q 5 SAPTSPCDQEIKELENNIRKAL 26 (31)
T ss_pred cCCCCchHHHHHHHHHHHHHHh
Confidence 3458899999999999999865
Done!