Query psy7883
Match_columns 607
No_of_seqs 252 out of 1887
Neff 6.4
Searched_HMMs 46136
Date Fri Aug 16 21:14:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7883.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7883hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK12425 fumarate hydratase; P 100.0 2E-105 3E-110 877.5 49.3 460 6-468 2-462 (464)
2 PRK14515 aspartate ammonia-lya 100.0 7E-101 2E-105 841.5 49.2 462 2-467 7-469 (479)
3 TIGR00979 fumC_II fumarate hyd 100.0 8E-101 2E-105 840.0 48.4 457 6-465 1-458 (458)
4 PLN00134 fumarate hydratase; P 100.0 2E-100 5E-105 836.5 49.1 454 13-467 1-455 (458)
5 COG0114 FumC Fumarase [Energy 100.0 7E-100 2E-104 784.7 46.4 459 5-466 2-461 (462)
6 PRK00485 fumC fumarate hydrata 100.0 7.1E-99 2E-103 827.4 49.0 461 3-466 1-462 (464)
7 PRK13353 aspartate ammonia-lya 100.0 7.3E-99 2E-103 828.0 46.8 459 4-466 3-462 (473)
8 PRK12273 aspA aspartate ammoni 100.0 2E-97 4E-102 816.4 47.3 462 3-467 2-465 (472)
9 COG1027 AspA Aspartate ammonia 100.0 1.6E-96 4E-101 757.4 43.8 464 3-468 1-465 (471)
10 TIGR00839 aspA aspartate ammon 100.0 6.6E-95 1.4E-99 793.8 48.4 459 7-467 1-461 (468)
11 cd01357 Aspartase Aspartase. T 100.0 1.2E-94 2.6E-99 790.7 46.9 449 7-459 1-450 (450)
12 cd01362 Fumarase_classII Class 100.0 5.2E-93 1.1E-97 778.3 49.3 453 7-462 1-454 (455)
13 cd01596 Aspartase_like asparta 100.0 3E-89 6.4E-94 747.2 48.4 448 7-459 1-450 (450)
14 KOG1317|consensus 100.0 4.3E-86 9.3E-91 663.8 38.1 462 4-467 26-487 (487)
15 COG0165 ArgH Argininosuccinate 100.0 1.7E-85 3.7E-90 701.8 35.8 436 22-512 4-457 (459)
16 KOG1316|consensus 100.0 5.7E-84 1.2E-88 653.1 27.5 432 22-509 7-456 (464)
17 PLN02646 argininosuccinate lya 100.0 1.1E-78 2.4E-83 667.7 37.0 425 32-511 31-469 (474)
18 PRK09053 3-carboxy-cis,cis-muc 100.0 2.2E-78 4.7E-83 664.4 36.5 415 20-470 8-439 (452)
19 PRK00855 argininosuccinate lya 100.0 2.1E-76 4.6E-81 649.8 38.3 435 21-510 4-456 (459)
20 TIGR00838 argH argininosuccina 100.0 9.4E-76 2E-80 644.3 38.4 413 44-511 23-453 (455)
21 cd01597 pCLME prokaryotic 3-ca 100.0 8.1E-76 1.8E-80 642.3 37.6 411 20-469 2-429 (437)
22 PRK08540 adenylosuccinate lyas 100.0 5.6E-76 1.2E-80 645.1 34.8 413 18-470 4-436 (449)
23 TIGR00928 purB adenylosuccinat 100.0 9.2E-76 2E-80 641.3 35.3 413 20-471 1-432 (435)
24 PRK04833 argininosuccinate lya 100.0 5.3E-75 1.1E-79 637.1 37.8 428 22-510 6-454 (455)
25 PRK08470 adenylosuccinate lyas 100.0 1E-74 2.2E-79 632.7 39.5 403 23-471 4-437 (442)
26 PRK06705 argininosuccinate lya 100.0 5.3E-75 1.1E-79 642.7 35.4 424 44-513 33-472 (502)
27 PRK07492 adenylosuccinate lyas 100.0 1.9E-74 4.2E-79 628.7 37.3 408 21-471 2-428 (435)
28 COG0015 PurB Adenylosuccinate 100.0 6E-74 1.3E-78 614.7 36.0 406 21-471 2-432 (438)
29 PRK07380 adenylosuccinate lyas 100.0 1.7E-73 3.7E-78 620.5 38.7 404 23-471 4-426 (431)
30 PRK06390 adenylosuccinate lyas 100.0 1.9E-73 4.1E-78 624.9 36.3 416 16-470 2-434 (451)
31 cd01359 Argininosuccinate_lyas 100.0 9.8E-73 2.1E-77 617.8 37.8 389 44-465 4-411 (435)
32 cd03302 Adenylsuccinate_lyase_ 100.0 5.2E-71 1.1E-75 603.0 39.6 407 20-466 1-436 (436)
33 cd01360 Adenylsuccinate_lyase_ 100.0 3.2E-71 6.9E-76 596.8 34.3 364 23-431 1-374 (387)
34 cd01595 Adenylsuccinate_lyase_ 100.0 1.7E-71 3.7E-76 598.4 32.1 359 44-431 6-375 (381)
35 PRK12308 bifunctional arginino 100.0 1.4E-70 3E-75 623.5 36.4 420 44-515 20-459 (614)
36 PRK02186 argininosuccinate lya 100.0 4E-70 8.7E-75 642.9 37.5 431 22-514 413-858 (887)
37 TIGR02426 protocat_pcaB 3-carb 100.0 1.9E-67 4.2E-72 557.9 33.5 335 21-395 3-338 (338)
38 PRK06389 argininosuccinate lya 100.0 9.6E-67 2.1E-71 562.3 34.0 353 44-440 27-390 (434)
39 PRK09285 adenylosuccinate lyas 100.0 1.1E-66 2.3E-71 570.1 31.4 412 17-471 9-452 (456)
40 cd01334 Lyase_I Lyase class I 100.0 2.2E-65 4.7E-70 540.4 33.8 323 49-398 1-325 (325)
41 PRK05975 3-carboxy-cis,cis-muc 100.0 7.4E-65 1.6E-69 539.9 33.4 336 20-397 11-347 (351)
42 cd01598 PurB PurB_like adenylo 100.0 1.4E-63 3E-68 540.4 35.6 393 44-465 6-424 (425)
43 PLN02848 adenylosuccinate lyas 100.0 6.8E-63 1.5E-67 539.5 36.3 415 17-470 12-454 (458)
44 PF00206 Lyase_1: Lyase; Inte 100.0 3.1E-62 6.7E-67 513.6 20.8 302 14-346 1-312 (312)
45 KOG2700|consensus 100.0 1.1E-47 2.4E-52 401.8 24.6 440 16-496 6-481 (481)
46 cd01594 Lyase_I_like Lyase cla 100.0 1.1E-33 2.3E-38 283.7 24.5 164 136-357 35-200 (231)
47 PRK08937 adenylosuccinate lyas 100.0 2.7E-29 5.9E-34 250.7 18.1 178 284-465 22-216 (216)
48 PF10415 FumaraseC_C: Fumarase 98.7 1.1E-08 2.3E-13 80.6 2.8 55 412-466 1-55 (55)
49 PF10397 ADSL_C: Adenylosuccin 97.9 4.1E-06 8.8E-11 71.2 1.9 58 414-471 11-77 (81)
50 PF14698 ASL_C2: Argininosucci 97.7 2.8E-05 6.1E-10 64.4 3.3 60 411-489 2-70 (70)
51 PF08328 ASL_C: Adenylosuccina 93.5 0.24 5.2E-06 44.8 6.7 74 389-464 31-115 (115)
52 KOG2700|consensus 88.1 7.9 0.00017 42.8 12.9 32 317-348 325-356 (481)
53 PF10925 DUF2680: Protein of u 55.6 41 0.00089 27.0 5.8 39 46-84 10-49 (59)
54 PF10078 DUF2316: Uncharacteri 33.3 2.2E+02 0.0049 24.8 7.3 54 433-499 20-73 (89)
55 CHL00180 rbcR LysR transcripti 21.0 3.5E+02 0.0076 27.8 7.8 59 180-239 44-102 (305)
No 1
>PRK12425 fumarate hydratase; Provisional
Probab=100.00 E-value=1.6e-105 Score=877.49 Aligned_cols=460 Identities=59% Similarity=0.954 Sum_probs=442.1
Q ss_pred ccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q psy7883 6 VRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVI 84 (607)
Q Consensus 6 ~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~ 84 (607)
+|+|+|++|+++||.+.|||.+|+|++.||++||. +.++++|+++..|++|||+||.+.| |+++++++|.++|++|.
T Consensus 2 ~r~e~d~~g~~~~p~~~~~g~~t~ra~~nf~~~~~--~~~~~~i~a~~~ik~Aha~~l~~~G~l~~~~~~~I~~al~ei~ 79 (464)
T PRK12425 2 SRTETDSLGPIEVPEDAYWGAQTQRSLINFAIGKE--RMPLAVLHALALIKKAAARVNDRNGDLPADIARLIEQAADEVL 79 (464)
T ss_pred CCcCcccCCCCCCcccccchHHHHHHHHcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999987 4779999999999999999999999 99999999999999998
Q ss_pred cCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHH
Q psy7883 85 SGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRL 164 (607)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L 164 (607)
++.. +++|+++.++.+++||+|||+||||++++.+++|++.|++.+||||+|||+||||||+++|+++|++|+.+.+.|
T Consensus 80 ~~~~-~~~f~~~~~~~g~~ed~~mnvnevi~~~~~e~~G~~~g~~~~vhpn~~vh~g~S~ND~~~Ta~~L~~r~~l~~~l 158 (464)
T PRK12425 80 DGQH-DDQFPLVVWQTGSGTQSNMNVNEVIAGRANELAGNGRGGKSPVHPNDHVNRSQSSNDCFPTAMHIAAAQAVHEQL 158 (464)
T ss_pred cCcc-cCCCCccCCCCCCcchHHHHHHHHHHHHHHHHhCcccccccccCchhcccCCCChhhHHHHHHHHHHHHHHHHHH
Confidence 8665 689999999998899999999999999999999987887778999999999999999999999999999874359
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCc
Q psy7883 165 LCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYV 244 (607)
Q Consensus 165 ~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~ 244 (607)
.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++++++.+|+||||+||++++++
T Consensus 159 ~~~L~~l~~~L~~~A~~~~~tim~GrTHlQ~A~PiT~G~~~~a~~~~l~rd~~RL~~~~~r~~~~plGggAvGT~~~~~~ 238 (464)
T PRK12425 159 LPAIAELSGGLAEQSARHAKLVKTGRTHMMDATPITFGQELSAFVAQLDYAERAIRAALPAVCELAQGGTAVGTGLNAPH 238 (464)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeeecccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhcCcccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCCC
Q psy7883 245 GFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSI 324 (607)
Q Consensus 245 ~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSSi 324 (607)
+|++.+.+.|++.|||+.++.+|++|++++||+++++++++++++++|+|||+||++|+|+|++||||+.+|+.++||||
T Consensus 239 ~~~~~~~~~La~~LG~~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~llsS~p~~g~~ei~lp~~~~GSSi 318 (464)
T PRK12425 239 GFAEAIAAELAALSGLPFVTAPNKFAALAGHEPLVSLSGALKTLAVALMKIANDLRLLGSGPRAGLAEVRLPANEPGSSI 318 (464)
T ss_pred cHHHHHHHHHHHHhCCCCcccccHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccCCceEEECCCCCCCCCC
Confidence 99999999999999999877899999999999999999999999999999999999999999999999999988999999
Q ss_pred CCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHH
Q psy7883 325 MPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAK 404 (607)
Q Consensus 325 MPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~ 404 (607)
|||||||+.+|.++++|+++.|++.+++....+++++.+.++|.+.+.++++++.+.++++.++..|+++|+||++||++
T Consensus 319 MPqK~NP~~~E~i~~~a~~v~G~~~~v~~~~~~~~~q~n~~~~~~~~~~l~s~~~l~~~~~~~~~~~i~~l~vn~erm~~ 398 (464)
T PRK12425 319 MPGKVNPTQCEALSMLACQVMGNDATIGFAASQGHLQLNVFKPVIIHNLLQSIRLLADGCRNFQQHCVAGLEPDAEQMAA 398 (464)
T ss_pred CCCCcCCHHHHHHHHHHHHHHhHHHHHHHHHhcCCchhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHH
Confidence 99999999999999999999999999988878889998888888888999999999999999999999999999999999
Q ss_pred hhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCC
Q psy7883 405 HVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEY 468 (607)
Q Consensus 405 ~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~~ 468 (607)
+++.+++++|+|++++||++||+++++|.++|++++|++.+.+.+++++++++|||.+|+|+..
T Consensus 399 ~l~~~~~~at~L~~~ig~~~A~~ia~~a~~~g~~l~e~~~~~~~l~~~el~~~ldP~~~~~~~~ 462 (464)
T PRK12425 399 HLERGLMLVTALNPHIGYDKAAEIAKKAYAEGTTLREAALALGYLTDEQFDAWVRPENMLEAGG 462 (464)
T ss_pred HHHcccHHHHHhhhccCHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHHcCHHHhcCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999764
No 2
>PRK14515 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=7e-101 Score=841.51 Aligned_cols=462 Identities=44% Similarity=0.732 Sum_probs=441.2
Q ss_pred CCCCccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHH
Q psy7883 2 GKDGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAA 80 (607)
Q Consensus 2 ~~~~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al 80 (607)
++..+|+|+|++|+++||.+.|||.||+|++.||++++. ..|..+|++++.+++|||+||.+.| |+++++++|.++|
T Consensus 7 ~~~~~r~e~d~~g~~~~p~~~~~g~~t~ra~~~f~~~~~--~~~~~~i~~~~~v~~A~a~~l~~~G~l~~~~~~~I~~al 84 (479)
T PRK14515 7 VKNGVRIEKDFLGEKEVPNYAYYGVQTMRAVENFPITGY--KIHEGLIKAFAIVKKAAALANTDVGRLELNKGGAIAEAA 84 (479)
T ss_pred CCCCCccccccCCCCCCcccccchHHHHHHHHhccCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Confidence 566799999999999999999999999999999998775 4789999999999999999999999 9999999999999
Q ss_pred HHHHcCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHH
Q psy7883 81 DEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEI 160 (607)
Q Consensus 81 ~~i~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l 160 (607)
++|.++.+ +++|++++++++.+++.|||+|||||+++++++|++.|+|..||||||||+||||||+++|+++|++|+.+
T Consensus 85 ~ei~~~~~-~~~f~~~~~~~g~~t~~nmnvnevie~~~~~~~G~~~g~~~~~hpnd~vn~grS~ND~v~Ta~~L~~~~~l 163 (479)
T PRK14515 85 QEILDGKW-HDHFIVDPIQGGAGTSMNMNANEVIANRALELLGMEKGDYHYISPNSHVNMAQSTNDAFPTAIHIATLNAL 163 (479)
T ss_pred HHHHcCcc-cCCCCCCcccCCCcccccchHHHHHHHHHHHHhCcccCCccccCccccCCCCCCchhHHHHHHHHHHHHHH
Confidence 99998766 68999999999999999999999999999999998779999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCC
Q psy7883 161 HNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGL 240 (607)
Q Consensus 161 ~~~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~ 240 (607)
. .|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++++++.+||||||+||++
T Consensus 164 ~-~l~~~L~~L~~~L~~~A~~~~~~vm~GrTHlQ~A~PiT~G~~~~~~a~~l~r~~~RL~~~~~~l~~~pLG~gAvGT~~ 242 (479)
T PRK14515 164 E-GLLQTMGYMHDVFELKAEQFDHVIKMGRTHLQDAVPIRLGQEFKAYSRVLERDMKRIQQSRQHLYEVNMGATAVGTGL 242 (479)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhcCCcccchhccccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCC
Confidence 6 599999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred CCCcchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCC
Q psy7883 241 NTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEP 320 (607)
Q Consensus 241 ~~d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~ 320 (607)
+++++|..++...|++.+|+..++.+|++|++++||+++++++++++++++|+|||+||++|+|+|++||+|+.+|++++
T Consensus 243 ~~~~~~~~~~l~~la~~~gl~~~~~~n~~da~~~rd~~~e~~~~l~~la~~L~kiA~Dl~llsS~p~~g~~Ei~lp~~~~ 322 (479)
T PRK14515 243 NADPEYIEAVVKHLAAISELPLVGAEDLVDATQNTDAYTEVSAALKVCMMNMSKIANDLRLMASGPRVGLAEIMLPARQP 322 (479)
T ss_pred CCChhHHHHHHHHHHHHhCCCCCCCcchHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCeeEEeCCCCCC
Confidence 99999999999999999999887777999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHH
Q psy7883 321 GSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNED 400 (607)
Q Consensus 321 GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~e 400 (607)
|||||||||||+.+|.++++|+++.|+..++++...+++++++.+.|.+...++.+++.+..++..++..|++||+||++
T Consensus 323 GSSiMP~KrNP~~~E~i~~~a~~v~G~~~~~~~~~~~~~le~n~~~p~i~~~l~~si~~l~~al~~~~~~~l~gl~vn~e 402 (479)
T PRK14515 323 GSSIMPGKVNPVMPEVINQIAFQVIGNDHTICLASEAGQLELNVMEPVLVFNLLQSISIMNNGFRAFTDNCLKGIEANED 402 (479)
T ss_pred CcCCCCcccCchHHHHHHHHHHHHHhHHHHHHHHHhcccHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 99999999999999999999999999999998777788899988778777889999999998887888889999999999
Q ss_pred HHHHhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCC
Q psy7883 401 TIAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467 (607)
Q Consensus 401 rm~~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~ 467 (607)
||++|+..+++++|+|++++||+.+++++++|.++|++++|++.+.+.++++|++++|||.+++++.
T Consensus 403 rm~~~l~~s~~l~t~La~~iG~~~v~~~a~~A~~~g~~l~e~~~~~~~l~~~el~~~ldP~~~~~~~ 469 (479)
T PRK14515 403 RLKEYVEKSVGIITAVNPHIGYEAAARVAKEAIATGQSVRELCVKNGVLSQEDLELILDPFEMTHPG 469 (479)
T ss_pred HHHHHHHhCccHHHHhcchhcHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHhCCHHHcCCCC
Confidence 9999999999999999999999999999999999999999999998999999999999999999863
No 3
>TIGR00979 fumC_II fumarate hydratase, class II. Putative fumarases from several species (Mycobacterium tuberculosis, Streptomyces coelicolor, Pseudomonas aeruginosa) branch deeply, although within the same branch of a phylogenetic tree rooted by aspartate ammonia-lyase sequences, and score between the trusted and noise cutoffs.
Probab=100.00 E-value=7.8e-101 Score=839.96 Aligned_cols=457 Identities=69% Similarity=1.075 Sum_probs=434.5
Q ss_pred ccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q psy7883 6 VRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVI 84 (607)
Q Consensus 6 ~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~ 84 (607)
||+|+|++|++++|.++|||.+|.|++.||+++|. +.+++++++|++||+||++||.++| ||++++++|.++|+++.
T Consensus 1 ~r~e~d~~g~~~~p~~~~~g~~t~r~~~~f~~~~~--~~~~~~i~a~~~ve~A~a~a~~~~Giip~~~a~~I~~a~~~i~ 78 (458)
T TIGR00979 1 FRIEKDSMGEIQVPADKYWGAQTQRSLENFKIGTE--KMPLELIHAFAILKKAAAIVNEDLGKLDAKKADAIVQAADEIL 78 (458)
T ss_pred CCCccccCCCCCCcccchhhHHHHHHHhcCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999987 4779999999999999999999999 99999999999999987
Q ss_pred cCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHH
Q psy7883 85 SGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRL 164 (607)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L 164 (607)
++++ +++|+.+.++.+.++++||++|+||+.++.+++|++.|++.++|||||||+|+||||+++|+++|++|+.+.+.|
T Consensus 79 ~~~~-~~~~~~~~~~~~~~~~~~m~~~~via~~l~e~~g~~~g~~~~vH~~d~vn~G~S~nDiv~Ta~~L~lr~~l~~~l 157 (458)
T TIGR00979 79 AGKL-DDHFPLVVWQTGSGTQSNMNVNEVIANRAIELLGGKLGSKQPVHPNDHVNKSQSSNDTFPTAMHIAAVLAIKNQL 157 (458)
T ss_pred hccc-cCCCceecccccccccccccHHHHHHHHHHHHcCcccCCCceeCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 7665 678888888888899999999999999999999977777767899999999999999999999999999874469
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCc
Q psy7883 165 LCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYV 244 (607)
Q Consensus 165 ~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~ 244 (607)
.+.|.+++++|.++|++|+||+||||||+|||||||||||+++|+++|.||++||.+++++++.+||||||+||++++++
T Consensus 158 ~~~l~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~~ 237 (458)
T TIGR00979 158 IPALENLKKTLDAKSKEFAHIVKIGRTHLQDATPLTLGQEFSGYVAQLEHGLERIAYSLPHLYELAIGGTAVGTGLNTHP 237 (458)
T ss_pred HHHHHHHHHHHHHHHHHccCCeeecccccccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhcCCccCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988899999999
Q ss_pred chhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCCC
Q psy7883 245 GFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSI 324 (607)
Q Consensus 245 ~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSSi 324 (607)
.++.++.++++++|||+.++++|+++++++||+++++++++++++++|+|||+||++|+|+||+|||||.+|++++||||
T Consensus 238 ~~~~~v~~~~a~~LGl~~~~~~n~~~~~~~rD~~~e~~~~La~la~~L~kia~Dl~llss~~~~e~gev~~p~~~~GSSi 317 (458)
T TIGR00979 238 GFDEKVAEEIAKETGLPFVTAPNKFEALAAHDAIVEAHGALKTLAASLMKIANDIRWLGSGPRCGLGELFIPENEPGSSI 317 (458)
T ss_pred hHHHHHHHHHHHHhCCCCeecCcHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCceeEECCCCCCCCCC
Confidence 88889999999999999877899999999999999999999999999999999999999999999999999998999999
Q ss_pred CCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHH
Q psy7883 325 MPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAK 404 (607)
Q Consensus 325 MPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~ 404 (607)
|||||||+.+|+++++|+++.|+..+++.....++++.+.++|.+.|.++++++.+.+++..++..|+++|+||++||++
T Consensus 318 MP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~v~~erm~~ 397 (458)
T TIGR00979 318 MPGKVNPTQCEALTMVCVQVMGNDATIGFAGSQGNFELNVFKPVIIYNFLQSVRLLSDAMESFRDHCVVGIEPNKERIQQ 397 (458)
T ss_pred CCCCcCCHHHHHHHHHHHHHHhhHHHHHHHHHhccchhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHH
Confidence 99999999999999999999999999987666667777777888889999999999999999988999999999999999
Q ss_pred hhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccC
Q psy7883 405 HVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLG 465 (607)
Q Consensus 405 ~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg 465 (607)
|+..+++++|+|++++||++||++++++.++|++|+|++.+.+.+++++++++|||.+|+|
T Consensus 398 nl~~~~~~~t~La~~lg~~~A~~~~~~a~~~~~~~~e~~~~~~~l~~~el~~~ldp~~~~~ 458 (458)
T TIGR00979 398 LLNNSLMLVTALNPHIGYDNAAKIAKKAHKEGITLKEAALELGLLSEEEFDEWVVPEQMVG 458 (458)
T ss_pred HHHcCccHHHHhhhccCHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHcCHHHhcC
Confidence 9999999999999999999999999999999999999999988899999999999999986
No 4
>PLN00134 fumarate hydratase; Provisional
Probab=100.00 E-value=2.1e-100 Score=836.51 Aligned_cols=454 Identities=71% Similarity=1.081 Sum_probs=432.4
Q ss_pred CCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccC
Q psy7883 13 FGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYED 91 (607)
Q Consensus 13 ~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~ 91 (607)
+|+++||.+.|||.+|.|++.||++||.....++++|++++.|++||++||.+.| ||++++++|.++|++|.++.. .+
T Consensus 1 ~g~~~~p~~~~~g~~t~ra~~nf~~~~~~~~~~~~~i~a~~~v~~A~a~~l~~~G~l~~~~a~~I~~al~ei~~~~~-~~ 79 (458)
T PLN00134 1 MGPIQVPADKLWGAQTQRSLQNFEIGGERERMPEPIVRAFGIVKKAAAKVNMEYGLLDPDIGKAIMQAADEVAEGKL-DD 79 (458)
T ss_pred CCCccCCcccchhHHHHHHHHhcCCCCCccCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcc-cC
Confidence 6999999999999999999999999994345789999999999999999999999 999999999999999988655 68
Q ss_pred CccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 92 HFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQML 171 (607)
Q Consensus 92 ~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L 171 (607)
+|+++++|.+.++++||++|+|||+++++++|++.|++.++|||||||+||||||+++|+++|++|++....+.+.|..|
T Consensus 80 ~f~~~~~~~g~g~~~~~~v~evie~~l~e~~g~~~g~~~~lHp~d~vh~G~S~nDiv~Ta~~L~~~~~~~~~l~~~l~~l 159 (458)
T PLN00134 80 HFPLVVWQTGSGTQTNMNANEVIANRAAEILGGPVGEKSPVHPNDHVNRSQSSNDTFPTAMHIAAATEIHSRLIPALKEL 159 (458)
T ss_pred CccccccccCCcccccCcHHHHHHHHHHHHhCcccCCccccCcccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999878887557999999999999999999999999966455699999999
Q ss_pred HHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHH
Q psy7883 172 HDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCT 251 (607)
Q Consensus 172 ~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~ 251 (607)
+++|.++|++|+||+||||||+|+|||||||||+++|+++|.||++||.+++++++.+||||||+||++++++.|+.++.
T Consensus 160 ~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~~~~~~~v~ 239 (458)
T PLN00134 160 HESLRAKSFEFKDIVKIGRTHLQDAVPLTLGQEFSGYATQVKYGLNRVQCTLPRLYELAQGGTAVGTGLNTKKGFDEKIA 239 (458)
T ss_pred HHHHHHHHHHhcCCccccccccCCCeeecHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCccCChhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred HHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCCCCCCCCCh
Q psy7883 252 QRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIMPGKVNP 331 (607)
Q Consensus 252 ~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSSiMPqKrNP 331 (607)
+++|++|||+.++.+|++|++++||+++++++++++++++|+|||+||++|+|+||+|||||.+|+.++|||||||||||
T Consensus 240 ~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~p~~e~gev~lp~~~~GSSiMP~KrNP 319 (458)
T PLN00134 240 AAVAEETGLPFVTAPNKFEALAAHDAFVELSGALNTVAVSLMKIANDIRLLGSGPRCGLGELNLPENEPGSSIMPGKVNP 319 (458)
T ss_pred HHHHHHhCCCCCCCccHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcceEECCCCCCCCCCCCCCcCC
Confidence 99999999998668999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred hHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHh
Q psy7883 332 TQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLM 411 (607)
Q Consensus 332 ~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~ 411 (607)
+.+|.++++|+++.|++.+++.....++++.+.++|++.|.++++++.+.+++..++..|+++|+||++||++|++.+++
T Consensus 320 v~~E~i~~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~l~~l~vn~erm~~~l~~~~~ 399 (458)
T PLN00134 320 TQCEALTMVCAQVMGNHVAITVGGSAGHFELNVFKPLIAYNLLHSIRLLGDASASFRKNCVRGIEANRERISKLLHESLM 399 (458)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhcCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccc
Confidence 99999999999999999998866667788887788988999999999999999999889999999999999999999999
Q ss_pred HHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCC
Q psy7883 412 LVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467 (607)
Q Consensus 412 lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~ 467 (607)
++++|++++||++||+++++|.++|++++|++.+.+.++++|++++|||.+|+|+.
T Consensus 400 l~~~La~~ig~~~A~~~~~~a~~~g~~l~e~~~~~~~l~~~el~~~ldP~~~~~~~ 455 (458)
T PLN00134 400 LVTALNPKIGYDKAAAVAKKAHKEGTTLKEAALKLGVLTAEEFDELVVPEKMTGPS 455 (458)
T ss_pred hHHHhhhccCHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHHcCHHHhcCCC
Confidence 99999999999999999999999999999999998899999999999999999964
No 5
>COG0114 FumC Fumarase [Energy production and conversion]
Probab=100.00 E-value=7.1e-100 Score=784.72 Aligned_cols=459 Identities=68% Similarity=1.055 Sum_probs=452.1
Q ss_pred CccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHH
Q psy7883 5 GVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEV 83 (607)
Q Consensus 5 ~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i 83 (607)
.+|+|+|++|++++|.|+|||.||+|++.||++|++ +.|..+|+++..+++|.|+++.++| +|++.+++|.++|++|
T Consensus 2 ~~R~E~Dt~G~i~Vpad~~wgAQTqRs~~nF~ig~~--~mp~~~I~Al~~lKkaaA~~N~~LG~L~~~~a~aI~~Aadev 79 (462)
T COG0114 2 TYRIEHDTMGEVEVPADALWGAQTQRSLENFPIGGE--KMPREIIRALGLLKKAAAQVNADLGLLDPEKADAIIAAADEV 79 (462)
T ss_pred CcccccccCccccccHHHHHHHHHHHHHhcCCcccc--cCcHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 489999999999999999999999999999999998 4899999999999999999999999 9999999999999999
Q ss_pred HcCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHH
Q psy7883 84 ISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNR 163 (607)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~ 163 (607)
++|++ +++||++.||+|+|++.|||+||||++++.+.+|++.|.+.+||||||||+|+||||+++||+++....++.+.
T Consensus 80 ~~Gk~-d~~FPl~VwQTGSGTqsNMN~NEVIanrA~e~~gg~~g~~~~VHPNDhVN~sQSSNDtfPTAmhIAa~~~v~~~ 158 (462)
T COG0114 80 LAGKH-DDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAVLAVVNR 158 (462)
T ss_pred HcCcc-cCCCCeEEEecCCCccccccHHHHHHHHHHHHhCcccCCCCCCCCCCcCCcccccCcchhhHHHHHHHHHHHHH
Confidence 99998 89999999999999999999999999999999999999888999999999999999999999999999999899
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCC
Q psy7883 164 LLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTY 243 (607)
Q Consensus 164 L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d 243 (607)
|++.|+.|.++|.+||++|.+++.+||||+|+|.|+|||+.|++|+.+|.+.++|++.+.+++...++||+|||||.+.+
T Consensus 159 LiPaL~~L~~~L~~Ka~~~~~iVKiGRTHLqDAtPlTlGQE~sGy~~ql~~~~~~i~~~l~~l~eLAiGGTAVGTGlNa~ 238 (462)
T COG0114 159 LIPALKHLIKTLAAKAEEFADVVKIGRTHLQDATPLTLGQEFSGYAAQLEHALERIEASLPHLYELAIGGTAVGTGLNAH 238 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhcCcccccccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCC
Q psy7883 244 VGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSS 323 (607)
Q Consensus 244 ~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSS 323 (607)
++|++++.+.++++.|+++.+.+|.|.+.+++|.++++..+|..++..|-|||+|||+|.||||+++||+.+|+.+.|||
T Consensus 239 p~f~ekva~~i~~~TG~~F~~a~NkF~al~~hd~lv~~~Gal~~lA~~L~KIAnDiR~l~SGPr~GLgEi~lPenePGSS 318 (462)
T COG0114 239 PEFGEKVAEELAELTGLPFVTAPNKFEALAAHDALVEASGALRTLAVSLMKIANDIRWLGSGPRCGLGEIELPENEPGSS 318 (462)
T ss_pred ccHHHHHHHHHHHHhCCCcccCCcHHHHHhcchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCCCcc
Confidence 99999999999999999998899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHH
Q psy7883 324 IMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIA 403 (607)
Q Consensus 324 iMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~ 403 (607)
|||.|.||+.||.+...|.+|+|+..++.+++..+.||+|+++|++.+++++++.++++++..+...|+.||++|+++|+
T Consensus 319 IMPGKVNPtq~EA~tmv~~QV~Gnd~ai~~ags~GnFELNv~~Pvi~~N~LqS~~LLada~~~f~~~ci~gie~n~~~i~ 398 (462)
T COG0114 319 IMPGKVNPTQCEALTMVAAQVIGNDAAIAFAGSQGNFELNVFKPVIAYNFLQSVRLLADAMRSFADHCIVGIEPNEERIK 398 (462)
T ss_pred CCCCCCCchhHHHHHHHHHHHHcchHHHHHhhccCceeeccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCC
Q psy7883 404 KHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGP 466 (607)
Q Consensus 404 ~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~ 466 (607)
++++.+.+++|+|++.|||+.|.+|++.|.++|++++|++.+.|++|++|+++++||++++++
T Consensus 399 ~~l~~SlmLVTaLnp~IGYdkAa~IAK~A~keg~tlreaa~~~G~lte~efd~~v~Pe~mv~~ 461 (462)
T COG0114 399 ELLERSLMLVTALNPHIGYDKAAKIAKKAHKEGTTLREAALELGLLSEEEFDKLVDPEKMVGP 461 (462)
T ss_pred HHHhhCchHHHhcccccchHHHHHHHHHHHHCCCcHHHHHHHcCCCCHHHHHHhcCHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999986
No 6
>PRK00485 fumC fumarate hydratase; Reviewed
Probab=100.00 E-value=7.1e-99 Score=827.39 Aligned_cols=461 Identities=70% Similarity=1.076 Sum_probs=433.6
Q ss_pred CCCccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH
Q psy7883 3 KDGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAAD 81 (607)
Q Consensus 3 ~~~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~ 81 (607)
|++||+|+|++|+++||.+++||+++.+++.+|++|+. ..+.+++++|++|++|||+||.++| ||++++++|.++|+
T Consensus 1 ~~~~r~e~d~~g~~~~~~~~l~g~~~~~~~~~f~~s~~--~~~~~~~~~~l~ve~A~a~al~~~Giip~~~a~~I~~al~ 78 (464)
T PRK00485 1 MMETRIEKDSMGEVEVPADALWGAQTQRSLENFPIGGE--RMPRELIRALALLKKAAARVNAELGLLDAEKADAIVAAAD 78 (464)
T ss_pred CCCcccccccCCCcCCccccccchhhHHHHhcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Confidence 46699999999999999999999999999999999965 3789999999999999999999999 99999999999999
Q ss_pred HHHcCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHH
Q psy7883 82 EVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIH 161 (607)
Q Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~ 161 (607)
++.++.+ +++|+.++.+.+.++++||++|++|+.++.+..|++.|.+..+|+++|||+|||||||++|+++|++|+.+.
T Consensus 79 ~i~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~g~~~~~~~~~h~~~~vh~G~SrnD~v~Ta~~L~lr~~l~ 157 (464)
T PRK00485 79 EVIAGKH-DDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAVLAIV 157 (464)
T ss_pred HHHhCcc-ccCCCcchhhccccccccccHHHHHHHHHHHhcCccccccCccCccccCCCCCCchhHHHHHHHHHHHHHHH
Confidence 9866434 567888888888899999999999999777766755554455799999999999999999999999999872
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCC
Q psy7883 162 NRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLN 241 (607)
Q Consensus 162 ~~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~ 241 (607)
..+.+.|.+|+++|.++|++|+||+||||||+|+||||||||||++|+++|.||++||.+++++++.+||||||+||+++
T Consensus 158 ~~l~~~l~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~PiTfG~~~~~~~~~l~R~~~RL~~~~~r~~~~pLGg~AvGT~~~ 237 (464)
T PRK00485 158 ERLLPALEHLRDTLAAKAEEFADIVKIGRTHLQDATPLTLGQEFSGYAAQLEHGIERIEAALPHLYELALGGTAVGTGLN 237 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeeeeecCcCceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcc
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999978899999
Q ss_pred CCcchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCC
Q psy7883 242 TYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPG 321 (607)
Q Consensus 242 ~d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~G 321 (607)
++++++.++.+++|++|||+.++.+|++|++++||+++|+++++++++++|+|||+||++|+|+|++|||||.+|++++|
T Consensus 238 ~~~~~~~~v~~~~A~~LGl~~~~~~n~~da~~~rD~~~e~~~~la~la~~L~ria~Dl~l~ss~~~~e~gev~lp~~~~G 317 (464)
T PRK00485 238 AHPGFAERVAEELAELTGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLASGPRCGLGEISLPENEPG 317 (464)
T ss_pred CChhHHHHHHHHHHHHhCCCCccCcCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCceEEcCCCCCC
Confidence 99999999999999999999668999999999999999999999999999999999999999999999999999998999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHH
Q psy7883 322 SSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDT 401 (607)
Q Consensus 322 SSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~er 401 (607)
||||||||||+.+|+|+++|+++.|++.+++....++++|++.+.+...|.++++++.+.++++.++..++++|+||++|
T Consensus 318 SSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~v~~er 397 (464)
T PRK00485 318 SSIMPGKVNPTQCEALTMVCAQVMGNDAAVTFAGSQGNFELNVFKPVIAYNFLQSIRLLADAMRSFADHCVVGIEPNRER 397 (464)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHhhhHHHHHHHhccCcccccccChHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHH
Confidence 99999999999999999999999999999987777889999988887789999999999999998888999999999999
Q ss_pred HHHhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCC
Q psy7883 402 IAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGP 466 (607)
Q Consensus 402 m~~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~ 466 (607)
|++|+..+++++|+|++++||++||++++++.++|.+|+|++.+.+.+++++++++|||.+|+|+
T Consensus 398 m~~~l~~~~~~~t~La~~lg~~~A~~~~~~a~~~g~~l~~~~~~~~~l~~~~l~~~ldP~~~~~~ 462 (464)
T PRK00485 398 IKELLERSLMLVTALNPHIGYDKAAKIAKKAHKEGLTLKEAALELGYLTEEEFDRWVDPEKMTGP 462 (464)
T ss_pred HHHHHHhCCeeHHHhccccCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcCHHHhcCC
Confidence 99999999999999999999999999999999999999999999888999999999999999996
No 7
>PRK13353 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=7.3e-99 Score=827.97 Aligned_cols=459 Identities=48% Similarity=0.776 Sum_probs=431.8
Q ss_pred CCccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHH
Q psy7883 4 DGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADE 82 (607)
Q Consensus 4 ~~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~ 82 (607)
.++|+|+|++|+++||.+.|||.+|+|++.||+++|. +.+.+++++|++|++|||+||.++| ||++++++|.++|++
T Consensus 3 ~~~r~~~d~~g~~~~~~~~~~g~~t~r~~~~f~~~~~--~~~~~~i~a~~~ve~A~a~~l~~~Glip~~~a~~I~~al~~ 80 (473)
T PRK13353 3 KNMRIEHDLLGEKEVPAEAYYGIQTLRAVENFPITGY--KIHPELIRAFAQVKKAAALANADLGLLPRRIAEAIVQACDE 80 (473)
T ss_pred CCcccccccCCCCCCcccccchHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 3599999999999999999999999999999999985 5789999999999999999999999 999999999999999
Q ss_pred HHcCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHH
Q psy7883 83 VISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHN 162 (607)
Q Consensus 83 i~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~ 162 (607)
+.++.+ .++|+++.++++.++++|||+|++|++++++++|++.|+|.+||||+|||+||||||+++|+++|++|+.+.
T Consensus 81 i~~~~~-~d~f~~~~~~~~~~~~~~~n~~~vi~~~l~e~~g~~~g~~~~~hp~d~vH~GrSrnD~v~Ta~~L~~r~~l~- 158 (473)
T PRK13353 81 ILAGKL-HDQFIVDPIQGGAGTSTNMNANEVIANRALELLGGEKGDYHYVSPNDHVNMAQSTNDVFPTAIRIAALNLLE- 158 (473)
T ss_pred HHhccc-cCCCCcchhhccccchhcchhhHHHHHHHHHHhCccccCCccCCcccCccCCCChhhHHHHHHHHHHHHHHH-
Confidence 877654 578999999999999999999999999999999977788778999999999999999999999999999876
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCC
Q psy7883 163 RLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNT 242 (607)
Q Consensus 163 ~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~ 242 (607)
.|.+.|..|+++|.++|++|+|++||||||+|+|||||||||+++|+++|.||++||.+++++++.+||||||+||++++
T Consensus 159 ~l~~~L~~l~~~L~~~A~~~~~~im~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~pLGg~AvGT~~~~ 238 (473)
T PRK13353 159 GLLAAMGALQDVFEEKAAEFDHVIKMGRTQLQDAVPITLGQEFSAYARALKRDRKRIQQAREHLYEVNLGGTAVGTGLNA 238 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeeccccCccceeecHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCccccCCccC
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999888999999
Q ss_pred CcchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCC
Q psy7883 243 YVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGS 322 (607)
Q Consensus 243 d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GS 322 (607)
+++++.++.+++|++|||+.++.+|++|++++||+++++++++++++++|+|||+||++|+|+||+|||||.+|+.++||
T Consensus 239 ~~~~~~~~~~~la~~LG~~~~~~~n~~~a~~~rD~~~e~~~~la~la~~l~riA~Dl~llss~pr~e~gev~lp~~~~GS 318 (473)
T PRK13353 239 DPEYIERVVKHLAAITGLPLVGAEDLVDATQNTDAFVEVSGALKVCAVNLSKIANDLRLLSSGPRTGLGEINLPAVQPGS 318 (473)
T ss_pred ChhHHHHHHHHHHHHhCCCCccccchHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCceEEECCCCCCCC
Confidence 99999999999999999997677899999999999999999999999999999999999999999999999999989999
Q ss_pred CCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHH
Q psy7883 323 SIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTI 402 (607)
Q Consensus 323 SiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm 402 (607)
|||||||||+.+|.++++|+++.|+..+++....+.+++.+..++.+...++.+++.+.+++..++..||++|+||++||
T Consensus 319 SiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~vn~erm 398 (473)
T PRK13353 319 SIMPGKVNPVMPEVVNQIAFQVIGNDVTITLAAEAGQLELNVMEPVIAFNLLESISILTNACRAFTDNCVKGIEANEERC 398 (473)
T ss_pred CCCCCCcCChHHHHHHHHHHHHHhHHHHHHHHHHcCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHH
Confidence 99999999999999999999999999998765555555555556666677888888888888888889999999999999
Q ss_pred HHhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCC
Q psy7883 403 AKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGP 466 (607)
Q Consensus 403 ~~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~ 466 (607)
++|+..+++++|+|++.+||+.+.+++++|.++|++|+|++.+.+.+++++++++|||.+|+++
T Consensus 399 ~~~l~~~~~l~t~La~~Lgh~~v~~~~~~a~~~g~~l~e~~~~~~~~~~~el~~~ldp~~~v~~ 462 (473)
T PRK13353 399 KEYVEKSVGIATALNPHIGYEAAARIAKEAIATGRSVRELALENGLLSEEELDLILDPFRMTHP 462 (473)
T ss_pred HHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCCHHHHHHHcCHHHhcCC
Confidence 9999999999999999999999999999999999999999998888999999999999999985
No 8
>PRK12273 aspA aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=2e-97 Score=816.37 Aligned_cols=462 Identities=47% Similarity=0.746 Sum_probs=420.4
Q ss_pred CCCccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH
Q psy7883 3 KDGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAAD 81 (607)
Q Consensus 3 ~~~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~ 81 (607)
|+.+|+|+|++|++++|.+.|||.+|+|++.||+++|...+..++++++|+++++||++||+++| ||++++++|.++|.
T Consensus 2 ~~~~r~~~~~~~~~~~~~~~~~~~~t~~~~~~f~~~~~~~~~~~~~~~~~l~ve~A~a~al~~~Gii~~~~a~~I~~al~ 81 (472)
T PRK12273 2 MMNTRIEKDLLGEREVPADAYYGIHTLRAVENFPISGVKISDYPELIRALAMVKKAAALANKELGLLDEEKADAIVAACD 81 (472)
T ss_pred CCCcccccccCCCcCCcccccchHHHHHHHHcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Confidence 45699999999999999999999999999999999986544459999999999999999999999 99999999999999
Q ss_pred HHHcCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHH
Q psy7883 82 EVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIH 161 (607)
Q Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~ 161 (607)
++.++.. +++|+++.++++.+++.||++|++|+.++++++|++.|++..+|||+|||+|||||||++|+++|++|+.+.
T Consensus 82 ~i~~~~~-~~~~~~~~~~~~~~e~~~~~v~~~i~~~~~e~~g~~~~~~~~vHp~d~v~~GrSrnD~v~Ta~~L~lr~~l~ 160 (472)
T PRK12273 82 EILAGKL-HDQFVVDVIQGGAGTSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQSTNDAYPTAIRIALLLSLR 160 (472)
T ss_pred HHHhccc-cCCcccchhhccccchhhhHHHHHHHHHHHHHhCcccCCcceeCCCCCCCCCCCchHHHHHHHHHHHHHHHH
Confidence 9876443 456888888888899999999999999777889865555423799999999999999999999999999876
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCC
Q psy7883 162 NRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLN 241 (607)
Q Consensus 162 ~~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~ 241 (607)
.|.+.|.+|+++|.++|++|+||+||||||+|||||||||||+++|+++|.||++||.+++++++.+||||||+||+++
T Consensus 161 -~l~~~L~~l~~~L~~~A~~~~dt~m~GrTH~Q~AqP~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~plGg~AvGT~~~ 239 (472)
T PRK12273 161 -KLLDALEQLQEAFEAKAKEFADILKMGRTQLQDAVPMTLGQEFGAYAVALAEDRKRLYRAAELLREVNLGATAIGTGLN 239 (472)
T ss_pred -HHHHHHHHHHHHHHHHHHHccCCEEeecccCccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccceeCCCC
Confidence 5999999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred CCcchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCC
Q psy7883 242 TYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPG 321 (607)
Q Consensus 242 ~d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~G 321 (607)
++++++.++++++|++|||+.++.+|++|++++||+++++++++++++++|+|||+||++|+|+||+|||||.+|+.++|
T Consensus 240 i~~~~~~~v~~~~A~~LGf~~~~~~n~~da~~~rD~~~e~~~~la~la~~L~rlA~Di~llss~e~~e~gev~lp~~~~G 319 (472)
T PRK12273 240 APPGYIELVVEKLAEITGLPLVPAEDLIEATQDTGAFVEVSGALKRLAVKLSKICNDLRLLSSGPRAGLNEINLPAVQAG 319 (472)
T ss_pred CChhHHHHHHHHHHHHcCCCcccCcCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCceEEECCCCCCc
Confidence 99998899999999999999766779999999999999999999999999999999999999999999999999988899
Q ss_pred CCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHH-HhhhccccCHH
Q psy7883 322 SSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTT-KCVTGILPNED 400 (607)
Q Consensus 322 SSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~-~vl~gL~Vn~e 400 (607)
||||||||||+.+|++|++|+++.|++.+++....+.+++.+...+.+...+++++..+..++ ..+. .++++|+||++
T Consensus 320 SSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~l~~l~v~~e 398 (472)
T PRK12273 320 SSIMPGKVNPVIPEVVNQVCFQVIGNDTTVTMAAEAGQLELNVMEPVIAYNLFESISILTNAC-RTLREKCIDGITANEE 398 (472)
T ss_pred CCCCCcccCcHHHHHHHHHHHHHhhhHHHHHHHHHcCCchhhhhhhhhHHHHHHHHHHHHHHH-HHHHHHHHccCEECHH
Confidence 999999999999999999999999999988754333344433334444566777777777655 5555 59999999999
Q ss_pred HHHHhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCC
Q psy7883 401 TIAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467 (607)
Q Consensus 401 rm~~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~ 467 (607)
||++|+..+++++|+|++.+||+.||+++++|.++|++|.|++.+.+.+++++++++|||.+|+++.
T Consensus 399 rm~~~l~~~~~~~t~LA~~L~~~~a~~lv~~a~~~g~~l~~~~~~~~~l~~~el~~~ldp~~~v~~~ 465 (472)
T PRK12273 399 RCREYVENSIGIVTALNPYIGYENAAEIAKEALETGKSVRELVLERGLLTEEELDDILSPENMTHPG 465 (472)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCCHHHHHHHcCHHHhCCCC
Confidence 9999999999999999999999999999999999999999999888889999999999999999864
No 9
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-96 Score=757.39 Aligned_cols=464 Identities=45% Similarity=0.747 Sum_probs=452.5
Q ss_pred CCCccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH
Q psy7883 3 KDGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAAD 81 (607)
Q Consensus 3 ~~~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~ 81 (607)
++++|+|+|.+|+.++|.+.|||.+|.|+.+||+++|.....-+.+++++..|++|.|.++.|+| ||++.+++|.+||+
T Consensus 1 ~~~~R~E~D~lGe~~ip~evYyGI~TlRA~eNF~Is~~~~~~~p~~i~a~~~VKKAaAlaN~elg~l~~~~~~aIv~ACD 80 (471)
T COG1027 1 STDMRIERDLLGEREIPAEVYYGIHTLRAVENFPISGLKISDVPEFIRAMAMVKKAAALANKELGALPKEIADAIVKACD 80 (471)
T ss_pred CCcchhhhhhcccccCcchhhhhhHHHHHHhcCCCcCCcccccHHHHHHHHHHHHHHHHhhhhhCCCCHHHHHHHHHHHH
Confidence 36799999999999999999999999999999999998644559999999999999999999999 99999999999999
Q ss_pred HHHcCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHH
Q psy7883 82 EVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIH 161 (607)
Q Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~ 161 (607)
+|++|++ .++|++|++|+|.|+++|||.||||++++.|++|.+.|.|..+||+||||+++|+||..+|++|+.+...+.
T Consensus 81 eil~Gk~-~dqFvvD~~QGGAGTS~NMN~NEVIAN~AlE~lG~~KGeY~~~hPndhVNmsQSTND~yPTa~ria~~~~l~ 159 (471)
T COG1027 81 EILDGKC-HDQFVVDVYQGGAGTSTNMNANEVIANRALELLGHEKGEYQYLHPNDHVNMSQSTNDAYPTAFRIAVYKSLR 159 (471)
T ss_pred HHHcCcc-ccccceeccccCCCccccccHHHHHHHHHHHHhcCCCCceeeeCCccccchhhcccccchhHHHHHHHHHHH
Confidence 9999998 899999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCC
Q psy7883 162 NRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLN 241 (607)
Q Consensus 162 ~~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~ 241 (607)
+ |.+.+..|++++..||++|++++++||||+|+|.|||+|+.|.+|+..|.||++||.++.+++..+.|||+|+|||.+
T Consensus 160 ~-L~~al~~L~~af~~Ka~EF~~ilKmGRTqLQDAvPmtlGqEF~Afa~~l~ed~~ri~~~~~~l~evNlGgTAiGTGiN 238 (471)
T COG1027 160 K-LIDALEDLIEAFERKAKEFADILKMGRTQLQDAVPMTLGQEFGAFAVALKEDIKRIYRAAELLLEVNLGGTAIGTGIN 238 (471)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhhhhhcChhhhcccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCceeeccCcC
Confidence 5 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCC
Q psy7883 242 TYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPG 321 (607)
Q Consensus 242 ~d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~G 321 (607)
.++++.+.+.+++++.+||+..+..|.++++++.|.++++.++|..++..|+|||+||||++||||++++|+.+|+.|.|
T Consensus 239 a~~~Y~~~vv~~l~evtg~~~~~A~~Lieatq~~~afv~vsg~lk~~Av~LsKI~NDlRLLsSGPr~Gl~EI~LP~~Q~G 318 (471)
T COG1027 239 APKGYIELVVKKLAEVTGLPLVPAENLIEATQDTGAFVMVSGALKRLAVKLSKICNDLRLLSSGPRAGLNEINLPAVQAG 318 (471)
T ss_pred CChhHHHHHHHHHHHHhCCCCccchhHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhhhhhccCCccCcccccCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHH
Q psy7883 322 SSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDT 401 (607)
Q Consensus 322 SSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~er 401 (607)
|||||.|.||+++|.+.+.|..|+|+..++.++...+++|+|+++|++.+.+++|+.++..++..+.++||+||++|+++
T Consensus 319 SSIMPgKVNPVipEvvnQvcf~ViGnD~tit~AaeaGQLqLNvmePvI~~~l~~Si~iL~na~~~l~ekcI~gItaN~e~ 398 (471)
T COG1027 319 SSIMPGKVNPVIPEVVNQVCFKVIGNDTTITMAAEAGQLQLNVMEPVIAYALFESISILTNACRNLREKCIDGITANEER 398 (471)
T ss_pred CCCCCCCcCchhHHHHHHHHHHHhcchHHHHHHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCC
Q psy7883 402 IAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEY 468 (607)
Q Consensus 402 m~~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~~ 468 (607)
|++++..|.+++|.|.+++||+.+..++++|.+.|++.+|++.+.+.||++||+++|+|..++.+..
T Consensus 399 C~~~v~nSigivTaLnp~iGy~~~~~iaK~a~~tgksv~evvLe~g~Lteeel~~Il~~~~m~~p~~ 465 (471)
T COG1027 399 CEEYVENSIGIVTALNPYIGYENAAIIAKEALETGKSVREVVLERGLLTEEELDDILSPENMTKPGY 465 (471)
T ss_pred HHHHHHhhhHHHHhhcccccchHHHHHHHHHHHcCCcHHHHHHHhCCCCHHHHHHHhChhhcCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999988754
No 10
>TIGR00839 aspA aspartate ammonia-lyase. Fumarate hydratase scores as high as 570 bits against this model.
Probab=100.00 E-value=6.6e-95 Score=793.82 Aligned_cols=459 Identities=41% Similarity=0.670 Sum_probs=425.0
Q ss_pred cccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHc
Q psy7883 7 RIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVIS 85 (607)
Q Consensus 7 r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~ 85 (607)
|||.|++|++++|.+.|||.+|.|++.||.++|.....+++++++|++|+.||++||.++| ||++++++|.++|+++.+
T Consensus 1 r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~i~~~l~ve~A~a~al~e~GiIp~~~a~~I~~al~~~~d 80 (468)
T TIGR00839 1 RIEEDLLGEREVPADAYYGIHTLRASENFYISNNKISDIPEFVRGMVMVKKAAALANKELGTIPESIANAIVAACDEILN 80 (468)
T ss_pred CCCcccCCCCCCcccccchHHHHHHHHcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999987544559999999999999999999999 999999999999988765
Q ss_pred -CccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHH
Q psy7883 86 -GKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRL 164 (607)
Q Consensus 86 -~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L 164 (607)
+++ .+.++++....+.|+++|+++|+||+..+++.+|.+.|+|..+|||||||+||||||+++|+++|++|+.+. .+
T Consensus 81 ~~~~-~~~~~l~~~~~~~g~~~~~~v~~vie~~l~e~~g~~~g~~~H~~p~~~v~~G~S~nD~v~Ta~~L~lr~~l~-~l 158 (468)
T TIGR00839 81 NGKC-HDQFPVDVYQGGAGTSVNMNTNEVIANLALELMGHQKGEYQYLNPNDHVNKSQSTNDAYPTGFRIAVYSSLI-KL 158 (468)
T ss_pred cccc-cccccccHHHccCccccccchHHHHHHHHHHHhCccccCeeecCCCCCCCCCCChhhHHHHHHHHHHHHHHH-HH
Confidence 443 346778877777889999999999999999999877899887889999999999999999999999999875 59
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCc
Q psy7883 165 LCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYV 244 (607)
Q Consensus 165 ~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~ 244 (607)
.+.|..|+++|.++|++|+||+||||||+|+|||||||||+++|+++|.|+++||.+++++++.+||||||+||++++++
T Consensus 159 ~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~~ 238 (468)
T TIGR00839 159 VDAINQLRDGFEQKAKEFADILKMGRTQLQDAVPMTLGQEFEAFSILLEEEVKNIKRTAELLLEVNLGATAIGTGLNTPP 238 (468)
T ss_pred HHHHHHHHHHHHHHHHHccCCeeeccccCccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcceeCCCcCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988899999999
Q ss_pred chhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCCC
Q psy7883 245 GFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSI 324 (607)
Q Consensus 245 ~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSSi 324 (607)
+++.++++++|++|||+.+..+|++|++++||+++++++++++++++|+|||+||++|+|+|++|||||.+|.+++||||
T Consensus 239 ~~~~~v~~~~a~~LGl~~~~~~n~~da~~~rd~~~e~~~~l~~la~~L~ria~Dl~l~~s~~~~~~~ev~~~~~~~gSS~ 318 (468)
T TIGR00839 239 EYSPLVVKKLAEVTGLPCVPAENLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSI 318 (468)
T ss_pred hHHHHHHHHHHHHhCCCCCCCccHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCceEEeCCCCCCCCCC
Confidence 98999999999999999865779999999999999999999999999999999999999999999999999977999999
Q ss_pred CCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHH
Q psy7883 325 MPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAK 404 (607)
Q Consensus 325 MPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~ 404 (607)
|||||||+.+|.++++++++.|++.+++....+.+++.+..++.+...++++++.+.+++..++..++++|+||++||++
T Consensus 319 MPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~vn~erm~~ 398 (468)
T TIGR00839 319 MPAKVNPVVPEVVNQVCFKVIGNDTTVTLAAEAGQLQLNVMEPVIGQAMFESIHILTNACYNLTDKCVNGITANKEICEG 398 (468)
T ss_pred CCCCcCcHHHHHHHHHHHHHHhHHHHHHHHHhcCChHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHH
Confidence 99999999999999999999999998866444455555445555556677888999999988888999999999999999
Q ss_pred hhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCC
Q psy7883 405 HVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467 (607)
Q Consensus 405 ~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~ 467 (607)
|+..+.+++++|++.+||+.||++++.+.++|++++|++.+.+.+++++++++|||.+|+++.
T Consensus 399 ~l~~~~~~~~~La~~~g~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldP~~~v~~~ 461 (468)
T TIGR00839 399 YVFNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLEKGLLTEEELDDIFSVENLMHPA 461 (468)
T ss_pred HHHHhHHHHHHHhhHhhHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHHcCHHHHcCCC
Confidence 999999999999999999999999999999999999999988889999999999999999863
No 11
>cd01357 Aspartase Aspartase. This subgroup contains Escherichia coli aspartase (L-aspartate ammonia-lyase), Bacillus aspartase and related proteins. It is a member of the Lyase class I family, which includes both aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid.
Probab=100.00 E-value=1.2e-94 Score=790.74 Aligned_cols=449 Identities=50% Similarity=0.804 Sum_probs=412.0
Q ss_pred cccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHc
Q psy7883 7 RIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVIS 85 (607)
Q Consensus 7 r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~ 85 (607)
|+|+|++|++++|.+.+||.+|+|++.||+++|. +.|++++++|+++++|||+||+++| ||++++++|.++|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~g~~t~~~~~~~~~~~~--~~d~~~i~~~l~ve~A~a~al~~~Giip~~~a~~I~~al~~i~~ 78 (450)
T cd01357 1 RIEHDLLGEREVPADAYYGIQTLRALENFPISGL--KIHPELIRALAMVKKAAALANAELGLLDEEKAEAIVKACDEIIA 78 (450)
T ss_pred CCCcccCCCcCCcccccchHHHHHHHHcCCCCCC--CcCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999985 5899999999999999999999999 999999999999999876
Q ss_pred CccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHH
Q psy7883 86 GKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLL 165 (607)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~ 165 (607)
+.+ .++|+++.++++.++++|+++|++|+.++++++|++.|+|.++|+|+|||+||||||+++|+++|++|+.+. .+.
T Consensus 79 ~~~-~d~~~~~~~~~~~~~~~~~~~~~vi~~~~~e~~g~~~g~~~~~h~~~~vH~GrSrnD~v~Ta~~L~lr~~l~-~l~ 156 (450)
T cd01357 79 GKL-HDQFVVDVIQGGAGTSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQSTNDVYPTALRLALILLLR-KLL 156 (450)
T ss_pred ccc-cCCCccchhhccccchhhhhHhHHHHHHHHHHhCccccCCcccCCcccccCCCChHhHHHHHHHHHHHHHHH-HHH
Confidence 544 467888888888999999999999999888889866777666899999999999999999999999999875 699
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcc
Q psy7883 166 CSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVG 245 (607)
Q Consensus 166 ~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~ 245 (607)
+.|..++++|.++|++|+||+||||||+|||||||||||+++|+++|.|+++||.+++++++.+||||||+||+++++++
T Consensus 157 ~~L~~l~~~L~~~A~~~~~t~m~GrTH~Q~A~P~TfG~~~~~~~~~l~r~~~rL~~~~~~~~~~pLGg~AvGt~~~~~~~ 236 (450)
T cd01357 157 DALAALQEAFQAKAREFADVLKMGRTQLQDAVPMTLGQEFGAYATALKRDRARIYKARERLREVNLGGTAIGTGINAPPG 236 (450)
T ss_pred HHHHHHHHHHHHHHHHccCCEeeccccCcccccchHHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888999999999
Q ss_pred hhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCCCC
Q psy7883 246 FAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIM 325 (607)
Q Consensus 246 ~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSSiM 325 (607)
++.++++++|++|||+.++.+|++|++++||+++++++++++++++|+|||+||++|+|+||+|||||.+|.+++|||||
T Consensus 237 ~~~~v~~~~a~~LGl~~~~~~n~~~a~~~rd~~~e~~~~l~~~a~~L~riA~Di~l~ss~e~~~~gev~~p~~~~GSSiM 316 (450)
T cd01357 237 YIELVVEKLSEITGLPLKRAENLIDATQNTDAFVEVSGALKRLAVKLSKIANDLRLLSSGPRAGLGEINLPAVQPGSSIM 316 (450)
T ss_pred HHHHHHHHHHHHhCCCCccCcCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCceeEECCCCCCcCCCC
Confidence 89999999999999997567799999999999999999999999999999999999999999999999999889999999
Q ss_pred CCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHh
Q psy7883 326 PGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKH 405 (607)
Q Consensus 326 PqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~ 405 (607)
||||||+.+|+|+++|+++.|+..++++...+..++.+...+.+...++.+++.+..++..+...+|++|+||++||++|
T Consensus 317 PqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~v~~erm~~~ 396 (450)
T cd01357 317 PGKVNPVIPEVVNQVAFQVIGNDLTITMAAEAGQLELNVFEPVIAYNLLESIDILTNAVRTLRERCIDGITANEERCREY 396 (450)
T ss_pred CCCcCcHHHHHHHHHHHHHhhHHHHHHHHHhcCcchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHH
Confidence 99999999999999999999999888553333334333334544566777777777655444359999999999999999
Q ss_pred hhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcC
Q psy7883 406 VNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVK 459 (607)
Q Consensus 406 l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lld 459 (607)
+..+++++|+|++.+||+.||+++++|.++|+++.|++.+.+.|+++||+++||
T Consensus 397 l~~~~~~~t~La~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~el~~~~~ 450 (450)
T cd01357 397 VENSIGIVTALNPYIGYEAAAEIAKEALETGRSVRELVLEEGLLTEEELDEILS 450 (450)
T ss_pred HHhCcchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHHhC
Confidence 999999999999999999999999999999999999999889999999999886
No 12
>cd01362 Fumarase_classII Class II fumarases. This subgroup contains Escherichia coli fumarase C, human mitochondrial fumarase, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=5.2e-93 Score=778.26 Aligned_cols=453 Identities=73% Similarity=1.100 Sum_probs=424.3
Q ss_pred cccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHc
Q psy7883 7 RIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVIS 85 (607)
Q Consensus 7 r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~ 85 (607)
|||+|.+|++++|.+++||.++.|+++||++|+.. .+++++++|++||+||++||+++| ||++++++|.++|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~f~~~~~~--~~~~~i~~~l~ve~A~a~al~~~GiIp~~~a~~I~~al~~i~~ 78 (455)
T cd01362 1 RIEKDSMGEVEVPADALWGAQTQRSLENFPIGGER--MPRELIRALGLLKKAAAQANAELGLLDEEKADAIVQAADEVIA 78 (455)
T ss_pred CCCcccCCCcCCccccchhHHHHHHHhccCCCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999874 679999999999999999999999 999999999999999865
Q ss_pred CccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHH
Q psy7883 86 GKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLL 165 (607)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~ 165 (607)
... +++|+.++.+.+.++++|+++|++|+..+.+..|+++|++.++|++.|||+|+|||||++|+++|++|+.+.+.+.
T Consensus 79 ~~~-~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g~~~g~~~~~~~~~~vH~G~SrnDiv~Ta~~L~lr~~l~~~l~ 157 (455)
T cd01362 79 GKL-DDHFPLVVWQTGSGTQTNMNVNEVIANRAIELLGGVLGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAALALQERLL 157 (455)
T ss_pred ccc-ccCCceehhhccccccccccHHHHHHHHHHHhcCcccCCcCcCCccccccCCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 323 5677888877888999999999999977777778788988778999999999999999999999999998766799
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcc
Q psy7883 166 CSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVG 245 (607)
Q Consensus 166 ~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~ 245 (607)
+.|..++++|.++|++|+||+||||||+|||||||||||+++|+++|.|+++||.+++++++.+||||+|+||++++++.
T Consensus 158 ~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~TfG~~~~~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~ 237 (455)
T cd01362 158 PALKHLIDALDAKADEFKDIVKIGRTHLQDATPLTLGQEFSGYAAQLEHAIARIEAALPRLYELALGGTAVGTGLNAHPG 237 (455)
T ss_pred HHHHHHHHHHHHHHHHccCCeeeccccCCCCeeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcCCeeccCCccCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999778999999998
Q ss_pred hhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCCCC
Q psy7883 246 FAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIM 325 (607)
Q Consensus 246 ~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSSiM 325 (607)
++..+.+++|++|||..++.+|++|++++||+++++++++++++++|+|||+||++|+|+|++|||||.+|++++|||||
T Consensus 238 ~~~~v~~~~a~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~l~ria~Dl~~~~s~~~~e~gev~~~~~~~GSS~M 317 (455)
T cd01362 238 FAEKVAAELAELTGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLGSGPRCGLGELSLPENEPGSSIM 317 (455)
T ss_pred HHHHHHHHHHHHhCCCCccCCCHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccCCCceEECCCCCCCCCCC
Confidence 88999999999999997678999999999999999999999999999999999999999888999999999989999999
Q ss_pred CCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHh
Q psy7883 326 PGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKH 405 (607)
Q Consensus 326 PqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~ 405 (607)
||||||+.+|+|+++++++.|.+.+++.....++++.+.+.+...|.+++.++.+.++++.++..++++|+||++||++|
T Consensus 318 PqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~v~~~rm~~~ 397 (455)
T cd01362 318 PGKVNPTQCEALTMVAAQVMGNDAAITIAGSSGNFELNVFKPVIIYNLLQSIRLLADACRSFADKCVAGIEPNRERIAEL 397 (455)
T ss_pred CCCCCcHHHHHHHHHHHHHhhhHHHHHHHHhcCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHH
Confidence 99999999999999999999999999866556667666555655688999999999999988889999999999999999
Q ss_pred hhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCccc
Q psy7883 406 VNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEK 462 (607)
Q Consensus 406 l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~ 462 (607)
+..+++++++|++++||++||++++++.++|.+|.|++.+.+.++++|++++|||.+
T Consensus 398 l~~~~~~~~~La~~ig~~~A~~l~~~a~~~~~~l~~~~~~~~~~~~~el~~~~dp~~ 454 (455)
T cd01362 398 LERSLMLVTALNPHIGYDKAAKIAKKAHKEGLTLKEAALELGYLTEEEFDRLVDPEK 454 (455)
T ss_pred HHhcchhHHHhccccCHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHHHhcCccc
Confidence 999999999999999999999999999999999999998888899999999999975
No 13
>cd01596 Aspartase_like aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. This group contains aspartase (L-aspartate ammonia-lyase), fumarase class II enzymes, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=3e-89 Score=747.17 Aligned_cols=448 Identities=63% Similarity=0.956 Sum_probs=417.0
Q ss_pred cccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHc
Q psy7883 7 RIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVIS 85 (607)
Q Consensus 7 r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~ 85 (607)
|+|+|.+|++++|.+.+||.++.+.+.+|++|+.. .+++++++|++++.||++||++.| ||++++++|.++|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~i~~~l~ve~A~a~al~~~Giip~~~a~~I~~~l~~i~~ 78 (450)
T cd01596 1 RIEKDSLGEVEVPADAYYGAQTQRALENFPISGER--MPPELIRALALVKKAAALANAELGLLDEEKADAIVQACDEVIA 78 (450)
T ss_pred CCCcccCCCCCCcccccccHhHHHHHhcCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHc
Confidence 89999999999999999999999999999999764 789999999999999999999999 999999999999999876
Q ss_pred CccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCC-CCCCChhhHHHHHHHHHHHHHHHHHH
Q psy7883 86 GKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHV-NKCQSSNDTFPTAMHIAVALEIHNRL 164 (607)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~V-h~GrSrnDiv~Ta~~L~lr~~l~~~L 164 (607)
+.. ++.|+.+..+.+.++++|+++|++|+.++.+.+|+..|+| .+|+++|| |+|+|||||++|+++|++|+.+. .+
T Consensus 79 ~~~-~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g~~~g~~-~~h~~~~v~h~g~SrnD~v~t~~~L~lr~~l~-~l 155 (450)
T cd01596 79 GKL-DDQFPLDVWQTGSGTSTNMNVNEVIANRALELLGGKKGKY-PVHPNDDVNNSQSSNDDFPPAAHIAAALALLE-RL 155 (450)
T ss_pred Ccc-cCCCcccHHhccCcccccchHHHHHHHHHHHHhccccCCc-ccCCCcccCCCCCCchHHHHHHHHHHHHHHHH-HH
Confidence 444 5677777777778999999999999977767888545665 26999998 79999999999999999999875 59
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCc
Q psy7883 165 LCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYV 244 (607)
Q Consensus 165 ~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~ 244 (607)
.+.|..|+++|.++|++|+|++||||||+|+|||||||||+++|+++|.||++||..++++++.+||||||+||++++++
T Consensus 156 ~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGg~A~Gt~~~~~~ 235 (450)
T cd01596 156 LPALEQLQDALDAKAEEFADIVKIGRTHLQDAVPLTLGQEFSGYAAQLARDIARIEAALERLRELNLGGTAVGTGLNAPP 235 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeeeccccccCCeeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcceeCCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988899999999
Q ss_pred chhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCCC
Q psy7883 245 GFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSI 324 (607)
Q Consensus 245 ~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSSi 324 (607)
.++.++++++|++|||+.++.+|++||+++||+++++++++++++++|+|||+||++|+|+|++|||||.+|++++|||+
T Consensus 236 ~~~~~v~~~~a~~LGl~~~~~~n~~d~~~~rd~~~e~~~~la~~~~~l~ria~Dl~~~ss~~~~e~gev~~~~~~~GSS~ 315 (450)
T cd01596 236 GYAEKVAAELAELTGLPFVTAPNLFEATAAHDALVEVSGALKTLAVSLSKIANDLRLLSSGPRAGLGEINLPANQPGSSI 315 (450)
T ss_pred hHHHHHHHHHHHHhCCCCccCcCHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCeeEECCCCCCCCCC
Confidence 99999999999999999767899999999999999999999999999999999999999988899999999998899999
Q ss_pred CCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHH
Q psy7883 325 MPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAK 404 (607)
Q Consensus 325 MPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~ 404 (607)
|||||||+.+|+|+++++++.|...+++....+.+++++...+...+.++++++.+.++++.++..++++|+||++||++
T Consensus 316 MPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~ 395 (450)
T cd01596 316 MPGKVNPVIPEAVNMVAAQVIGNDTAITMAGSAGQLELNVFKPVIAYNLLQSIRLLANACRSFRDKCVEGIEANEERCKE 395 (450)
T ss_pred CCCCCCCHHHHHHHHHHHHHhccHHHHHHHhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHH
Confidence 99999999999999999999999999887777778887766665567799999999999988888999999999999999
Q ss_pred hhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcC
Q psy7883 405 HVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVK 459 (607)
Q Consensus 405 ~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lld 459 (607)
|+..+++++|+|++.+||+.||++++++.++|+++.+++.+.+.|++++++++||
T Consensus 396 ~l~~~~~~~t~LA~~lg~~~a~~~v~~a~~~g~~l~~~~~~~~~~~~~~l~~~~d 450 (450)
T cd01596 396 YVENSLMLVTALNPHIGYEKAAEIAKEALKEGRTLREAALELGLLTEEELDEILD 450 (450)
T ss_pred HHHhCcchHHHHhHHHhHHHHHHHHHHHHHcCCCHHHHHHHhCCCCHHHHHHHhC
Confidence 9999999999999999999999999999999999999998889899999999886
No 14
>KOG1317|consensus
Probab=100.00 E-value=4.3e-86 Score=663.76 Aligned_cols=462 Identities=77% Similarity=1.145 Sum_probs=452.9
Q ss_pred CCccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Q psy7883 4 DGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFGLDSKIADTISKAADEV 83 (607)
Q Consensus 4 ~~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~GIp~e~a~~I~~al~~i 83 (607)
+..|+|+|.+|++++|.|+|||.||+|+..||.+||..++.|...++++.-+++|.|..+.+.|+++..+++|.++++++
T Consensus 26 ~~fR~E~DtfGe~~VP~DkyyGAQT~Rs~~NF~IGg~~ERMP~pii~AfGiLKkaaA~vN~~~GLDpkis~Ai~~AadeV 105 (487)
T KOG1317|consen 26 SSFRTERDTFGEIEVPADKYYGAQTQRSLQNFKIGGERERMPEPIIQAFGILKKAAAEVNQEYGLDPKISKAISQAADEV 105 (487)
T ss_pred cchhhhccccCcccccchhhhhHHHHHHhhccccCCccccCchHHHHHHHHHHHHHHHHhHhhCCChHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHH
Q psy7883 84 ISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNR 163 (607)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~ 163 (607)
.+|++ .++||+..||+|+|++.|||.||||.++++|.+|.+.|.+. +|||||||..+|+||.++|++++..-.++.+.
T Consensus 106 ~~GKL-~dhFPLvvwQTGSGTQsNMN~NEVIsNrAieilGg~~GsK~-VHPNdHvN~SQSSNDTFPtamHIa~~~ei~~~ 183 (487)
T KOG1317|consen 106 ASGKL-NDHFPLVVWQTGSGTQSNMNANEVISNRAIEILGGKLGSKK-VHPNDHVNKSQSSNDTFPTAMHIAAATEINSR 183 (487)
T ss_pred hcCcc-cccCceeEEecCCCccccCcHHHHHHHHHHHHhcccccCcc-cCCccccccccccCCccchHHHHHHHHHHHHh
Confidence 99998 78999999999999999999999999999999999999886 99999999999999999999999999899899
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCC
Q psy7883 164 LLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTY 243 (607)
Q Consensus 164 L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d 243 (607)
|++.|..|.++|..++.+++|++.+||||.|+|.|.|+|+.|++|++.+...++|+..+.+|+.....||+||||+++.-
T Consensus 184 L~P~l~~L~~aL~aKs~EfkdIiKIGRTHtqDAvPLTLGQEFsgY~qQ~~ngl~Rv~~~lpr~y~LA~GGTAVGTGLNTr 263 (487)
T KOG1317|consen 184 LIPALTNLRDALEAKSKEFKDIIKIGRTHTQDAVPLTLGQEFSGYVQQVTNGLQRVAATLPRLYQLAQGGTAVGTGLNTR 263 (487)
T ss_pred hhHHHHHHHHHHHhhhHHHHHHHHhcccccccccccchhhhhhhHHHHHHHHHHHHHhhhhHHHHHhcCCcccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCC
Q psy7883 244 VGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSS 323 (607)
Q Consensus 244 ~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSS 323 (607)
++|.+++.++++++.||++...+|-+.+.+.||.++|+..+|..++.+|-||++||+++.||||.++||+.+|+...|||
T Consensus 264 ~GFaeK~a~~va~ltgLpFvtApNkFEALAahDA~VE~~GalNt~A~SlmKianDIRfLGSGPRcGlgEL~LPENEPGSS 343 (487)
T KOG1317|consen 264 KGFAEKIAARVAELTGLPFVTAPNKFEALAAHDAMVEVSGALNTIAVSLMKIANDIRFLGSGPRCGLGELMLPENEPGSS 343 (487)
T ss_pred ccHHHHHHHHHHHHhCCCceecccHHHHHHhhhhHHHhcccHHHHHHHHHHHhhhhhhccCCCCCCccccccCCCCCCcc
Confidence 99999999999999999998899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHH
Q psy7883 324 IMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIA 403 (607)
Q Consensus 324 iMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~ 403 (607)
|||.|.||.-||.+...|.+|.|+..++...+.+++||+|+++|++..+++.++.+++|+...+...|+.||+.|+||+.
T Consensus 344 IMPGKVNPTQcEamTmvcaQVMGN~vAvtvgGsnGhFELNVFKP~i~~nvL~SirLl~D~~~sF~~nCV~GI~aN~erI~ 423 (487)
T KOG1317|consen 344 IMPGKVNPTQCEAMTMVCAQVMGNHVAVTVGGSNGHFELNVFKPLIASNVLHSIRLLADASVSFTKNCVVGIEANKERIA 423 (487)
T ss_pred cCCCCCCcHHHHHHHHHHHHHhcCceEEEecccCceeEEecchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCC
Q psy7883 404 KHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467 (607)
Q Consensus 404 ~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~ 467 (607)
+.+.++.|++|+|.++|||+.|..|++.|.++|.+|.+...+.|.+|++++++.+.|+.++|+.
T Consensus 424 kll~eSLMLVTALNPhIGYD~aAkiAKtAhKng~TLk~eal~lG~lTeeqFdewV~Pe~Mlgpk 487 (487)
T KOG1317|consen 424 KLLNESLMLVTALNPHIGYDNAAKIAKTAHKNGTTLKEEALKLGVLTEEQFDEWVVPEKMLGPK 487 (487)
T ss_pred HHHHhhhhhhhccCCccCchhHHHHHHHHhhcCCcHHHHHHHhcCCCHHHHHhhhCHHhccCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999973
No 15
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-85 Score=701.78 Aligned_cols=436 Identities=23% Similarity=0.347 Sum_probs=388.1
Q ss_pred CCCchHhhhh----cccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCcccc
Q psy7883 22 KYYGAQTVRS----LINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLS 96 (607)
Q Consensus 22 ~~yg~~~~ra----i~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~ 96 (607)
.+||.++.+. +..|+.|.. .|..++..-+.+..||+.||.+.| |+++++++|.++|.++.++ ...++|.++
T Consensus 4 ~lwggRf~~~~~~~~~~~~~Si~---~D~~l~~~di~~s~AH~~mL~~~Gii~~ee~~~I~~~L~~l~~e-~~~g~~~~~ 79 (459)
T COG0165 4 KLWGGRFSGGPDPLVKEFNASIS---FDKRLAEYDIAGSIAHAKMLAKQGIITEEEAAKILEGLEELLEE-IRAGKFELD 79 (459)
T ss_pred CCCCCCccCCCcHHHHHHhccch---hHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH-HhcCCccCC
Confidence 4566554444 566777755 789999999999999999999999 9999999999999988752 213345544
Q ss_pred ccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 97 IWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALD 176 (607)
Q Consensus 97 ~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~ 176 (607)
+ ..||+|++ ||++|++++| +.||++ |+ ||||||||+|+++||+|+++.+ |...+..|+++|+
T Consensus 80 ~----~~EDvH~a----iE~~L~~~iG-~~ggkL--ht------gRSRNDQVatd~rL~lr~~~~~-l~~~i~~l~~aL~ 141 (459)
T COG0165 80 P----DDEDVHTA----IEARLIERIG-DVGGKL--HT------GRSRNDQVATDLRLWLRDKLLE-LLELIRILQKALL 141 (459)
T ss_pred C----ccccHHHH----HHHHHHHHHh-hhhchh--cc------ccchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 2 57898888 9999999999 899985 75 9999999999999999999875 9999999999999
Q ss_pred HHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccc-cCCCCCCcchhHHHHHHHH
Q psy7883 177 KKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRIS 255 (607)
Q Consensus 177 ~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAv-GT~~~~d~~~~~~v~~~la 255 (607)
++|++|.+++||||||+|+|||+|||||+.+|+++|.||++||.++++|++.+|||+||. ||++++|| +++|
T Consensus 142 ~~Ae~~~~~imPGyTHlQ~AQPvtf~H~llay~~~l~RD~~Rl~d~~~rvn~sPLGagAlaGt~~~iDR-------~~tA 214 (459)
T COG0165 142 DLAEEHAETVMPGYTHLQRAQPVTFAHHLLAYAEMLARDIERLRDALKRVNVSPLGAGALAGTPFPIDR-------ERTA 214 (459)
T ss_pred HHHHHccCCccCCcccccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccccCCCCCCCCH-------HHHH
Confidence 999999999999999999999999999999999999999999999999999999999997 99999998 5799
Q ss_pred HHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCC-CCCCCCCCCCCChhHH
Q psy7883 256 ELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQV 334 (607)
Q Consensus 256 ~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~~ 334 (607)
++|||+. +..|++|++++|||++|+++++++++.+|||||+||++|+| .|||+|++|+. ++|||||||||||+.+
T Consensus 215 ~lLGF~~-~~~Nsldavs~Rdf~le~l~~~s~~~~~LSRlaedlI~wss---~EfgfI~l~D~~sTGSSIMPQKKNPD~~ 290 (459)
T COG0165 215 ELLGFDA-VTRNSLDAVSDRDFILEFLSAAALIMVHLSRLAEDLILWSS---PEFGFIELPDEFSTGSSIMPQKKNPDVL 290 (459)
T ss_pred HHcCCch-hhcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---ccCceEeCCcccccccccCCCCCCCcHH
Confidence 9999996 89999999999999999999999999999999999999998 59999999997 8999999999999999
Q ss_pred HHHHHHHHHhhcchHHHH--hcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhH
Q psy7883 335 EALTMVAAQVMGNHVAVT--VGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLML 412 (607)
Q Consensus 335 E~ir~~a~~v~G~~~~~~--~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~l 412 (607)
|+||++++++.|++.+++ +++.+..|+++.++. ...+++++..+.+++ .++..++++|+||+++|++.+.+++++
T Consensus 291 ELiRgk~grv~G~l~~ll~~~k~lPlaYnrDlQed--ke~lfds~~t~~~~l-~~~~~mv~~l~vn~e~~~~a~~~gfs~ 367 (459)
T COG0165 291 ELIRGKAGRVIGALTGLLTIMKGLPLAYNRDLQED--KEPLFDSVDTLEDSL-RVLAGMVSGLTVNKERMREAAEAGFST 367 (459)
T ss_pred HHHHHhhhhhHHHHHHHHHHHhcCcccccHHHHhh--hHHHHHHHHHHHHHH-HHHHHHHccCeeCHHHHHHHhhcccch
Confidence 999999999999999887 456666666665543 466889999988766 455699999999999999999999999
Q ss_pred HHhhCC-----CCCHHHHHHHHH----HHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCcccCCCccccccch
Q psy7883 413 VTALNP-----HIGYDKAAEIAK----HAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHT 483 (607)
Q Consensus 413 at~La~-----~ig~~~Ah~ia~----~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~~~~~~~~~v~~~~~~~ 483 (607)
+|+||+ ++|||+||+++. ++.+.|+++.+ ++.++++.+ ++++.+||++ ++++
T Consensus 368 aTdlAd~lv~kGvPFReAh~ivG~~v~~~~~~~~~l~~-------l~~~~~~~~-----------~~~~~~dv~~-~l~~ 428 (459)
T COG0165 368 ATDLADYLVRKGVPFREAHEIVGEAVRRAEERGKDLAD-------LSLEELQSI-----------SPLIDEDVYE-VLTP 428 (459)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCHHh-------ccHHHHhhh-----------ccccchHHHH-Hhch
Confidence 998864 699999999865 45677887776 888898874 7899999999 9999
Q ss_pred HHHHHHHhhhccCCCCCCCCCchhhhhcc
Q psy7883 484 EKVISQQILAAKVLPPWSRPSCPQARSII 512 (607)
Q Consensus 484 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (607)
+.+|+.+...||+.|+.++.+++.+++-+
T Consensus 429 ~~~v~~R~~~Ggtap~~v~~~i~~~~~~l 457 (459)
T COG0165 429 EESVAKRNSEGGTAPEEVREAIARAKARL 457 (459)
T ss_pred HHHHHHhhccCCCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999988754
No 16
>KOG1316|consensus
Probab=100.00 E-value=5.7e-84 Score=653.12 Aligned_cols=432 Identities=21% Similarity=0.281 Sum_probs=392.0
Q ss_pred CCCchHhhhh----cccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCcccc
Q psy7883 22 KYYGAQTVRS----LINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLS 96 (607)
Q Consensus 22 ~~yg~~~~ra----i~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~ 96 (607)
++||.++..+ +..|+-|.. ++..++.+.++..+|+|.++++.| |++++.+.|.++++.|.. +|..++|.+.
T Consensus 7 KlWGGRFtg~~dp~m~~fn~Si~---ydk~ly~~Dv~gSkaya~~L~~~glit~~e~dkil~gLe~i~~-ew~~~kf~~~ 82 (464)
T KOG1316|consen 7 KLWGGRFTGAVDPLMEKFNASIP---YDKRLYEADVDGSKAYAKALEKAGLITEAELDKILKGLEKIRR-EWAAGKFKLN 82 (464)
T ss_pred hhhccccCCCCCHHHHHhhccCc---cchHHHHhhhhhhHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH-HHhcCceEeC
Confidence 6788877776 778887765 899999999999999999999999 999999999999998876 5545677665
Q ss_pred ccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 97 IWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALD 176 (607)
Q Consensus 97 ~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~ 176 (607)
+ ++||+|++ +|++|.|++| +.++++ |+ ||||||||.|++|||+|+.+. .+...+..|++++.
T Consensus 83 p----~dEDvHta----nErrL~eliG-~~agKl--HT------gRSRNDQV~TDlRLw~r~~i~-~~~~~l~~L~~~~v 144 (464)
T KOG1316|consen 83 P----NDEDVHTA----NERRLTELIG-EIAGKL--HT------GRSRNDQVVTDLRLWLRDAID-TILGLLWNLIRVLV 144 (464)
T ss_pred C----CchhhhhH----HHHHHHHHHh-hhhhhc--cc------CccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 3 67999988 8999999999 688875 76 999999999999999999875 59999999999999
Q ss_pred HHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccc-cCCCCCCcchhHHHHHHHH
Q psy7883 177 KKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRIS 255 (607)
Q Consensus 177 ~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAv-GT~~~~d~~~~~~v~~~la 255 (607)
++|+.+.|++||||||+|+|||+.|.||+.+++..|.||..||.+++.|+|.+|||+||+ |+++++|| +.++
T Consensus 145 ~rAe~~~dvlmpGYTHLQRAQpvrwsH~LlSha~~l~~D~~Rl~q~~~R~n~~PLGagALAGnpl~iDR-------~~la 217 (464)
T KOG1316|consen 145 DRAEAELDVLMPGYTHLQRAQPVRWSHWLLSHAEQLTRDLGRLVQIRKRLNQLPLGAGALAGNPLGIDR-------EFLA 217 (464)
T ss_pred HHHhhccCeeccChhhhhhccCchhHHHHHHHHHHHHhHHHHHHHHHHHhccCCcccchhcCCCCCccH-------HHHH
Confidence 999999999999999999999999999999999999999999999999999999999997 99999998 4699
Q ss_pred HHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCC-CCCCCCCCCCCChhHH
Q psy7883 256 ELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQV 334 (607)
Q Consensus 256 ~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~~ 334 (607)
+.|||.. ++-|||++++.|||++||++|.++++.||||||+|+++|+| .|||+|.+.+. .+|||+||||+||+++
T Consensus 218 ~~LgF~~-v~~NSm~AvsDRDFVvef~fw~sm~m~HlSRlaEdlIiy~t---~EF~Fv~lSDaySTGSSlMPQKKNpDsl 293 (464)
T KOG1316|consen 218 EELGFEG-VIMNSMDAVSDRDFVVEFLFWASMVMTHLSRLAEDLIIYST---KEFGFVTLSDAYSTGSSLMPQKKNPDSL 293 (464)
T ss_pred HhcCCcc-cchhhhhccccchhHHHHHHHHHHHHHHHHHHhhHhheeec---cccCceeeccccccCcccCCCCCCCCHH
Confidence 9999997 79999999999999999999999999999999999999998 69999999986 8999999999999999
Q ss_pred HHHHHHHHHhhcchHHHHh--cccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhH
Q psy7883 335 EALTMVAAQVMGNHVAVTV--GGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLML 412 (607)
Q Consensus 335 E~ir~~a~~v~G~~~~~~~--~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~l 412 (607)
|++|+++++|+|.+.++++ +|.++.|+.+.+++ ++.+|++...+.+.+ ..+.+++++|+||+|+|++.|.. .++
T Consensus 294 ELlRgksgrV~gdl~g~lmt~KG~PstYnkDlQeD--Kep~Fds~~tv~~~l-~v~tgv~stltvn~e~m~~aLt~-dml 369 (464)
T KOG1316|consen 294 ELLRGKSGRVFGDLTGLLMTLKGLPSTYNKDLQED--KEPLFDSSKTVSDSL-QVATGVISTLTVNQENMEKALTP-DML 369 (464)
T ss_pred HHhccccceehhhhHHHHHHhcCCccccccchhhh--hhHHHhhHHHHHHHH-HHHHHHhhheeECHHHHhhccCc-hhh
Confidence 9999999999999999974 78888888887665 466899999998765 56779999999999999999987 588
Q ss_pred HHhhCC-----CCCHHHHHHHHH----HHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCcccCCCccccccch
Q psy7883 413 VTALNP-----HIGYDKAAEIAK----HAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHT 483 (607)
Q Consensus 413 at~La~-----~ig~~~Ah~ia~----~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~~~~~~~~~v~~~~~~~ 483 (607)
||+||+ ++|||++|+|+. .|.+.|.++.+ |+.+|++++ ++.|+.||.. +|+|
T Consensus 370 ATdlA~YLVrKGvPFRqtHhisG~~V~~ae~rg~~l~~-------Lsledlqkl-----------splF~eDv~~-v~~y 430 (464)
T KOG1316|consen 370 ATDLAYYLVRKGVPFRQTHHISGKAVRMAEERGVTLDK-------LSLEDLQKL-----------SPLFEEDVFC-VFNY 430 (464)
T ss_pred HhHHHHHHHHcCCCchhhhhhhHHHHHHHHHcCCCccc-------CCHHHHhhc-----------CcccccchHH-hhch
Confidence 998875 689999999865 46788888875 999999996 9999999999 9999
Q ss_pred HHHHHHHhhhccCCCCCCCCCchhhh
Q psy7883 484 EKVISQQILAAKVLPPWSRPSCPQAR 509 (607)
Q Consensus 484 ~~~v~~~~~~~~~~~~~~~~~~~~~~ 509 (607)
|+|||||.+.||++-.-+..|..|-+
T Consensus 431 e~sVek~~a~GgTa~s~V~eQl~~~k 456 (464)
T KOG1316|consen 431 ENSVEKRCAIGGTAKSCVLEQLRQLK 456 (464)
T ss_pred hhhHHHhhccCCchHHHHHHHHHHHH
Confidence 99999999999998887777666544
No 17
>PLN02646 argininosuccinate lyase
Probab=100.00 E-value=1.1e-78 Score=667.74 Aligned_cols=425 Identities=21% Similarity=0.259 Sum_probs=368.7
Q ss_pred cccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCccccccccCCCcccccch
Q psy7883 32 LINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNV 110 (607)
Q Consensus 32 i~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~di~~~v 110 (607)
+..|+-+-. .|..++...+.+.+||++||.++| ||++++++|.++|+++.++.. +++|++. . ..+|+||+
T Consensus 31 ~~~~~~s~~---~d~~l~~~di~~~~Aha~~L~~~Gii~~~~a~~I~~al~~i~~~~~-~~~f~~~---~-~~ed~h~~- 101 (474)
T PLN02646 31 VEKFNESIS---FDKRLYKEDIMGSKAHASMLAKQGIITDEDRDSILDGLDEIEKEIE-AGKFEWR---P-DREDVHMN- 101 (474)
T ss_pred HHHHhcCHH---HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcc-cCCCcCC---C-CCCchHHH-
Confidence 555654433 678999999999999999999999 999999999999999976433 4667643 3 34899998
Q ss_pred hHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q psy7883 111 NEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGR 190 (607)
Q Consensus 111 nevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA~~~~dt~m~Gr 190 (607)
||+++++++| +.|++ +| +|||||||++|+++|++|+.+. .|.+.|.+|+++|.++|++|+|++||||
T Consensus 102 ---iE~~L~e~~G-~~g~~--lH------~grSrND~v~Ta~~L~lr~~l~-~l~~~L~~L~~~L~~~A~~~~dtvmpGr 168 (474)
T PLN02646 102 ---NEARLTELIG-EPAKK--LH------TARSRNDQVATDTRLWCRDAID-VIRKRIKTLQVALVELAEKNVDLVVPGY 168 (474)
T ss_pred ---HHHHHHHHhc-hhhCc--cc------CCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCEEecc
Confidence 8899999998 56664 35 6999999999999999999876 5999999999999999999999999999
Q ss_pred cccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccc-cCCCCCCcchhHHHHHHHHHHhCCCCcCCCCch
Q psy7883 191 THTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRISELTGLPFKSAPNKF 269 (607)
Q Consensus 191 TH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAv-GT~~~~d~~~~~~v~~~la~~LGl~~~~~~ns~ 269 (607)
||+||||||||||||++|+++|.||++||.+++++++.+||||||+ ||++++|+ +++|++|||.. +..|++
T Consensus 169 THlQ~AqPiT~G~~l~~~~~~l~rd~~RL~~~~~r~~~~pLGgga~aGt~~~idr-------~~~A~~LGf~~-~~~n~~ 240 (474)
T PLN02646 169 THLQRAQPVLLSHWLLSHVEQLERDAGRLVDCRPRVNFCPLGSCALAGTGLPIDR-------FMTAKDLGFTA-PMRNSI 240 (474)
T ss_pred cCCccceeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhcCCCCCCCH-------HHHHHHhCCCC-CCCChH
Confidence 9999999999999999999999999999999999999999999997 99998887 57999999985 788999
Q ss_pred hhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhcch
Q psy7883 270 EALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQVEALTMVAAQVMGNH 348 (607)
Q Consensus 270 da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~ 348 (607)
||+++||+++++++++++++++|+|||+||++|+| .|||||.+|+. ++|||||||||||+.+|++|++|+++.|++
T Consensus 241 da~~~RD~~~e~~~~la~ia~~LsRia~Dl~l~ss---~e~g~v~~~d~~~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~ 317 (474)
T PLN02646 241 DAVSDRDFVLEFLFANSITAIHLSRLGEEWVLWAS---EEFGFVTPSDAVSTGSSIMPQKKNPDPMELVRGKSARVIGDL 317 (474)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCCCeeeeCCCCCCCcCCCCCCCCCHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999997 58999999975 899999999999999999999999999999
Q ss_pred HHHHh--cccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhHHHhhC-----CCCC
Q psy7883 349 VAVTV--GGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALN-----PHIG 421 (607)
Q Consensus 349 ~~~~~--~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~lat~La-----~~ig 421 (607)
.+++. .+.+..|+++.+.. ...+++.+..+..+ +..+..+|++|+||+++|++++..+++++|+|+ .++|
T Consensus 318 ~~~~~~~~~~p~~~~rD~q~~--~~~l~~~~~~~~~~-l~~~~~~l~~l~v~~~rm~~~l~~~~~~At~la~~Lv~~Gi~ 394 (474)
T PLN02646 318 VTVLALCKGLPTAYNRDLQED--KEPLFDSVDTVSDM-LEVATEFAQNITFNPERIKKSLPAGMLDATTLADYLVRKGVP 394 (474)
T ss_pred HHHHHHhcCCchHhhcchhhH--HHHHHHHHHHHHHH-HHHHHHHHccCEECHHHHHHHHHcCccHHHHHHHHHHHcCCC
Confidence 88863 45555666665332 23355666666654 466678999999999999999999988888764 3699
Q ss_pred HHHHHHHHH----HHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCcccCCCccccccchHHHHHHHhhhccCC
Q psy7883 422 YDKAAEIAK----HAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVISQQILAAKVL 497 (607)
Q Consensus 422 ~~~Ah~ia~----~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~~ 497 (607)
|++||++|. ++.++|+++.| ++.++++.+ .+.+.+||.. +++++++|+.+...||+.
T Consensus 395 fr~Ah~iV~~~v~~a~~~g~~l~~-------l~~~~~~~~-----------~~~~~~~~~~-~l~~~~~v~~r~~~Gg~~ 455 (474)
T PLN02646 395 FRETHHIVGAAVALAESKGCELSD-------LTLEDLKSI-----------NPVFEEDVYE-VLGVENSVEKFDSYGSTG 455 (474)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHH-------HHHHHHHHh-----------cccchHHHHH-hCCHHHHHHHccCCCCCC
Confidence 999999875 46778899988 666677774 2336888998 999999999999999999
Q ss_pred CCCCCCCchhhhhc
Q psy7883 498 PPWSRPSCPQARSI 511 (607)
Q Consensus 498 ~~~~~~~~~~~~~~ 511 (607)
|..++.++.++++.
T Consensus 456 p~~v~~~~~~~~~~ 469 (474)
T PLN02646 456 SRSVLEQLEKWRTK 469 (474)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998874
No 18
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=2.2e-78 Score=664.37 Aligned_cols=415 Identities=22% Similarity=0.284 Sum_probs=361.5
Q ss_pred CCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCcccccc
Q psy7883 20 NDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIW 98 (607)
Q Consensus 20 ~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~ 98 (607)
.+.+||..+|+++| ++++++++|++||+|+|++|+++| ||++.+++|.++|++ ++|+++.+
T Consensus 8 ~~~~~~~~~~~~i~----------s~~~~i~a~l~ve~A~A~a~~~~G~ip~~~a~~I~~a~~~--------~~~d~~~~ 69 (452)
T PRK09053 8 TDLYFGSPAMRAIF----------SDRATVQRMLDFEAALARAEAACGVIPAAAVAPIEAACDA--------ERLDLDAL 69 (452)
T ss_pred hhhhcCCHHHHHHc----------CcHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhccc--------cCCCHHHH
Confidence 34699999999999 899999999999999999999999 999999999999864 12456666
Q ss_pred ccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 99 QTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKK 178 (607)
Q Consensus 99 ~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~l 178 (607)
+.+.++..|.. .+.+ +.+.+.+| . .+.|+++|||+|+||||+++|+++|++|+.+. .+.+.|..|+++|.++
T Consensus 70 ~~~~~~~~~~~-~~lv-~~l~~~~~----~-~~~~~~~~vH~G~SsnDi~~Ta~~l~lr~~l~-~l~~~l~~l~~~L~~~ 141 (452)
T PRK09053 70 AQAAALAGNLA-IPLV-KQLTAQVA----A-RDAEAARYVHWGATSQDIIDTGLVLQLRDALD-LLEPDLDRLCDALATL 141 (452)
T ss_pred HHHHhhcCCch-HHHH-HHHHHHhc----c-cCcchhccccCCCChhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 66666665543 2221 22334444 2 12488999999999999999999999999864 6999999999999999
Q ss_pred HHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHHHHHh
Q psy7883 179 SQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELT 258 (607)
Q Consensus 179 A~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~la~~L 258 (607)
|++|+||+||||||+||||||||||||++|+++|.||++||.+++++++.+||||+ +||+ +..++++..+++++|++|
T Consensus 142 A~~~~~t~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGga-vGt~-~~~~~~~~~v~~~~a~~L 219 (452)
T PRK09053 142 AARHRATPMVGRTWLQQALPVTLGLKFAGWLDALLRHRQRLAALRPRALVLQFGGA-AGTL-ASLGEQALPVAQALAAEL 219 (452)
T ss_pred HHHccCCeeehhccCCcceechHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccch-hhcc-cccccchHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999996 7994 444667788899999999
Q ss_pred CCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCC--CCCCCCCCCCCCChhHHHH
Q psy7883 259 GLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPTQVEA 336 (607)
Q Consensus 259 Gl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~~~E~ 336 (607)
||+.+..+ |+++||++++++++|++++++|+|||+||++|++ +|||||.+|. +++|||||||||||+.+|.
T Consensus 220 Gl~~~~~~----~~~~rD~~~e~~~~la~la~~L~kia~Di~ll~~---~e~gev~e~~~~~~~GSSiMP~KrNPv~~E~ 292 (452)
T PRK09053 220 QLALPALP----WHTQRDRIAEFASALGLLAGTLGKIARDVSLLMQ---TEVGEVFEPAAAGKGGSSTMPHKRNPVGCAA 292 (452)
T ss_pred CCCCCCCC----cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccchhhccccCCCCCcCCCCCCCCchHHHH
Confidence 99975433 5799999999999999999999999999999994 7999998775 4799999999999999999
Q ss_pred HHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhHH---
Q psy7883 337 LTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLV--- 413 (607)
Q Consensus 337 ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~la--- 413 (607)
++++|+++.|+..++ +.+..++++++...|.+.|..++.+..+...++..+..++++|+||++||++|++.+.+++
T Consensus 293 i~~~a~~v~g~~~~~-~~~~~~~~erd~~~~~~~~~~l~~~~~~~~~al~~~~~~l~~l~v~~erm~~~l~~s~~~~~ae 371 (452)
T PRK09053 293 VLTAATRAPGLVATL-FAAMPQEHERALGGWHAEWDTLPELACLAAGALAQMAQIVEGLEVDAARMRANLDLTHGLILAE 371 (452)
T ss_pred HHHHHHHHHHHHHHH-HHhChhhhcccCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhcCCHHHHH
Confidence 999999999999887 5566788999987877778777777777777788888999999999999999998877554
Q ss_pred ---HhhCCCCCHHHHHHHH----HHHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCCc
Q psy7883 414 ---TALNPHIGYDKAAEIA----KHAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYHP 470 (607)
Q Consensus 414 ---t~La~~ig~~~Ah~ia----~~A~~~g~~l~e~l~~~----~~Ls~eel~~lldP~~~vg~~~~~ 470 (607)
+.|++.+||++||+++ +++.++|++|+|++.+. +.+++++++++|||.+|+|.+..+
T Consensus 372 ~~~~~La~~lgr~~Ah~iV~~~~~~a~~~g~~~~~~~~~~~~~~~~l~~~~l~~~l~P~~~~g~~~~~ 439 (452)
T PRK09053 372 AVMLALADRIGRLDAHHLVEQASKRAVAEGRHLRDVLAEDPQVSAHLSPAALDRLLDPAHYLGQAHAW 439 (452)
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHCCCHHHHHHhChhhhccCCHHHHHHHcCHHHHhcchHHH
Confidence 7899999999999994 56778999999999875 679999999999999999987754
No 19
>PRK00855 argininosuccinate lyase; Provisional
Probab=100.00 E-value=2.1e-76 Score=649.77 Aligned_cols=435 Identities=22% Similarity=0.318 Sum_probs=372.8
Q ss_pred CCCCchH----hhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCccc
Q psy7883 21 DKYYGAQ----TVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPL 95 (607)
Q Consensus 21 ~~~yg~~----~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~ 95 (607)
+.+||.+ +.+++.+|+++-. .+.+++.+++.+++||+.||.+.| ||++++++|.++|+++.++.. .++|++
T Consensus 4 ~~~~g~~~~~~~~~~~~~~~~s~~---~~~~~~~~~~~~~~Aha~~l~~~G~l~~~~a~~i~~al~~i~~~~~-~~~~~~ 79 (459)
T PRK00855 4 NKLWGGRFSEGPDELVERFTASIS---FDKRLAEEDIAGSIAHARMLAKQGILSEEEAEKILAGLDEILEEIE-AGKFEF 79 (459)
T ss_pred ccccccCCCcchHHHHHHcccCcc---chHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhcc-cCCccc
Confidence 4688887 8999999999944 789999999999999999999999 999999999999999976433 467776
Q ss_pred cccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 96 SIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDAL 175 (607)
Q Consensus 96 ~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L 175 (607)
++ .++|+|++ ||+++++++| +.|++ ||+||||||+++|+++|++|+.+. .+.+.|..++++|
T Consensus 80 ~~----~~~d~~~~----ie~~l~~~~g-~~g~~--------iH~g~SrnD~~~Ta~~L~~r~~l~-~l~~~L~~l~~~L 141 (459)
T PRK00855 80 SP----ELEDIHMA----IEARLTERIG-DVGGK--------LHTGRSRNDQVATDLRLYLRDEID-EIAELLLELQKAL 141 (459)
T ss_pred CC----CCCcHHHH----HHHHHHHHhc-cccCc--------ccCCCCHhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 53 57898888 8999999998 66654 446999999999999999999876 5999999999999
Q ss_pred HHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccc-cCCCCCCcchhHHHHHHH
Q psy7883 176 DKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRI 254 (607)
Q Consensus 176 ~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAv-GT~~~~d~~~~~~v~~~l 254 (607)
.++|++|++|+||||||+|||||||||||+++|+++|.||++||.+++++++.+||||+|+ ||++++++ +++
T Consensus 142 ~~~A~~~~~t~m~GrTH~Q~A~P~T~G~~l~~~~~~L~r~~~rL~~~~~~~~~~plGgaag~gt~~~~~r-------~~~ 214 (459)
T PRK00855 142 LDLAEEHADTIMPGYTHLQRAQPVTFGHHLLAYAEMLARDLERLRDARKRVNRSPLGSAALAGTTFPIDR-------ERT 214 (459)
T ss_pred HHHHHHcCCCEeecCcCCccceeecHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhcCCCCCcCH-------HHH
Confidence 9999999999999999999999999999999999999999999999999999999999986 89888776 579
Q ss_pred HHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCC-CCCCCCCCCCCChhH
Q psy7883 255 SELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQ 333 (607)
Q Consensus 255 a~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~ 333 (607)
|++|||.. +..|++||+++||++++++++++.++++|+|||+||++|+| .|||||.+|+. ++|||||||||||+.
T Consensus 215 a~~LG~~~-~~~n~~~a~~~rd~~~e~~~~l~~la~~L~ria~Dl~l~ss---~e~gei~~p~~~~~gSSiMPqK~NP~~ 290 (459)
T PRK00855 215 AELLGFDG-VTENSLDAVSDRDFALEFLSAASLLMVHLSRLAEELILWSS---QEFGFVELPDAFSTGSSIMPQKKNPDV 290 (459)
T ss_pred HHHcCCCC-CCCCHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---cCCCeEeCCCCCCCCcCCCCCCCCCHH
Confidence 99999997 78999999999999999999999999999999999999997 58999999986 599999999999999
Q ss_pred HHHHHHHHHHhhcchHHHHh--cccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHh
Q psy7883 334 VEALTMVAAQVMGNHVAVTV--GGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLM 411 (607)
Q Consensus 334 ~E~ir~~a~~v~G~~~~~~~--~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~ 411 (607)
+|+++++|+++.|+..+++. ...+..++++.... ...+++++..+.++ +..+..++++|+||+++|++++..+++
T Consensus 291 ~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rD~~~~--~~~l~~~~~~~~~a-l~~~~~~l~~l~v~~~~m~~~l~~~~~ 367 (459)
T PRK00855 291 AELIRGKTGRVYGNLTGLLTVMKGLPLAYNRDLQED--KEPLFDAVDTLKLS-LEAMAGMLETLTVNKERMREAAGKGFS 367 (459)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhcCchHHhhhhhhhh--HHHHHHHHHHHHHH-HHHHHHHHccCEECHHHHHHHHHcchh
Confidence 99999999999999988874 33334455554332 23355556666554 455567999999999999999999998
Q ss_pred HHHhhCC-----CCCHHHHHHHHH----HHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCcccCCCccccccc
Q psy7883 412 LVTALNP-----HIGYDKAAEIAK----HAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFH 482 (607)
Q Consensus 412 lat~La~-----~ig~~~Ah~ia~----~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~~~~~~~~~v~~~~~~ 482 (607)
+++++++ ++||++||+++. ++.++|+++.+++ .++++.+. .+..+++.. +.+
T Consensus 368 ~at~la~~Lv~~gi~~r~Ah~~v~~~~~~a~~~g~~~~~~~-------~~~~~~~~-----------~~~~~~~~~-~~~ 428 (459)
T PRK00855 368 TATDLADYLVRKGVPFREAHEIVGKAVREAEERGVDLADLS-------LEELQAFS-----------PLITEDVYE-VLT 428 (459)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHh-------HHHHHHhc-----------ccchHHHHH-HhC
Confidence 8876643 699999999854 5678899999844 34455531 124556777 889
Q ss_pred hHHHHHHHhhhccCCCCCCCCCchhhhh
Q psy7883 483 TEKVISQQILAAKVLPPWSRPSCPQARS 510 (607)
Q Consensus 483 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 510 (607)
.+++|+.+...||..|..++.+..+++.
T Consensus 429 ~~~~v~~r~~~Gg~~~~~~~~~~~~~~~ 456 (459)
T PRK00855 429 PEGSVAARNSIGGTAPEQVREQIARAKA 456 (459)
T ss_pred hHHHHHhcCCCCCCCHHHHHHHHHHHHh
Confidence 9999999999999999988877777654
No 20
>TIGR00838 argH argininosuccinate lyase. This model describes argininosuccinate lyase, but may include examples of avian delta crystallins, in which argininosuccinate lyase activity may or may not be present and the biological role is to provide the optically clear cellular protein of the eye lens.
Probab=100.00 E-value=9.4e-76 Score=644.31 Aligned_cols=413 Identities=21% Similarity=0.274 Sum_probs=351.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCccccccccCCCcccccchhHHHHHHHHHHh
Q psy7883 44 MPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEML 122 (607)
Q Consensus 44 ~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~l 122 (607)
.+..++...+.+++||++||.+.| ||++++++|.++|+++.++.. +++|+.++. .+|+||+ ||+++++++
T Consensus 23 ~d~~l~~~~i~~~~Ah~~~L~~~G~l~~~~a~~I~~al~~i~~~~~-~~~~~~~~~----~~d~~~~----ie~~l~e~~ 93 (455)
T TIGR00838 23 FDKELAEYDIEGSIAHTKMLKKAGILTEEEAAKIIEGLNELKEEGR-EGPFILDPD----DEDIHMA----IERELIDRV 93 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcc-cCCcCCCCC----cCcHHHH----HHHHHHHHh
Confidence 478889999999999999999999 999999999999999987544 456766654 3676665 999999999
Q ss_pred ccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchh
Q psy7883 123 GGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLG 202 (607)
Q Consensus 123 G~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG 202 (607)
|++.|++ ||+||||||+++|+++|++|+.+. .|.+.|..|+++|.++|++|+|++||||||+|||||||||
T Consensus 94 g~~~g~~--------iH~g~SrnD~~~Ta~~L~lr~~l~-~l~~~L~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P~T~G 164 (455)
T TIGR00838 94 GEDLGGK--------LHTGRSRNDQVATDLRLYLRDHVL-ELAEALLDLQDALIELAEKHVETLMPGYTHLQRAQPITLA 164 (455)
T ss_pred CCCccCC--------ccCCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCCEeecccccccceeccHH
Confidence 9666654 446999999999999999999876 4999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccc-cCCCCCCcchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHH
Q psy7883 203 QEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEV 281 (607)
Q Consensus 203 ~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAv-GT~~~~d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~ 281 (607)
|||++|+++|.|+++||.+++++++.+||||||+ ||++++++ +++|+.|||+. +..|++||+++||+++++
T Consensus 165 ~~~~~~~~~L~r~~~rL~~~~~~~~~~plGg~a~aGt~~~~~r-------~~~a~~LG~~~-~~~n~~~a~~~rd~~~e~ 236 (455)
T TIGR00838 165 HHLLAYAEMLLRDYERLQDALKRVNVSPLGSGALAGTGFPIDR-------EYLAELLGFDA-VTENSLDAVSDRDFILEL 236 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcchhcccCCCCCCCH-------HHHHHHcCCCC-CcCCHHHHHhCcHHHHHH
Confidence 9999999999999999999999999999999997 99888776 47999999997 578999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhcchHHHHhccccc--
Q psy7883 282 SGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNG-- 358 (607)
Q Consensus 282 ~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~-- 358 (607)
+++++.++++|+|||+||++|+| +|||||.+|+. ++|||||||||||+.+|+++++++++.|+..+++....+.
T Consensus 237 ~~~l~~~a~~L~ria~Dl~l~ss---~e~gei~lp~~~~~GSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~ 313 (455)
T TIGR00838 237 LFVAALIMVHLSRFAEDLILWST---GEFGFVELPDEFSSGSSIMPQKKNPDVAELIRGKTGRVQGNLTGMLMTLKALPL 313 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC---CCCCeeeCCCCCCCccCCCCCCcCChHHHHHHHHHHHHhhhHHHHHHHHhcCCh
Confidence 99999999999999999999997 57999999986 8999999999999999999999999999998887543333
Q ss_pred ccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhHHHhhCC-----CCCHHHHHHHHH---
Q psy7883 359 HFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALNP-----HIGYDKAAEIAK--- 430 (607)
Q Consensus 359 ~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~lat~La~-----~ig~~~Ah~ia~--- 430 (607)
+++++. +.....+++.+..+..++ ..+..++++|+||+++|++++..+++++|++++ ++||++||+++.
T Consensus 314 ~~~rd~--~~~~~~l~~~~~~~~~al-~~~~~~i~~l~v~~~rm~~~~~~~~~~at~la~~Lv~~g~~~r~Ah~~v~~~~ 390 (455)
T TIGR00838 314 AYNRDL--QEDKEPLFDALKTVELSL-EMATGMLDTITVNKERMEEAASAGFSNATELADYLVRKGVPFREAHHIVGELV 390 (455)
T ss_pred Hhhhhh--HhhHHHHHHHHHHHHHHH-HHHHHHHccCEECHHHHHHHHHcCccHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 344443 222344555666665554 555679999999999999999999988876643 699999999865
Q ss_pred -HHHHcCCCHHHHHHHcCC----CCHHHHhhhcCcccccCCCCCcccCCCccccccchHHHHHHHhhhccCCCCCCCCCc
Q psy7883 431 -HAYKTGITLKEAAVKLGY----LTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVISQQILAAKVLPPWSRPSC 505 (607)
Q Consensus 431 -~A~~~g~~l~e~l~~~~~----Ls~eel~~lldP~~~vg~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 505 (607)
++.++|+++.|++.+... +..+++++ +++++++|+.+...||..|..++.+.
T Consensus 391 ~~a~~~g~~l~~~~~~~~~~~~~~~~~~l~~-----------------------~ldp~~~v~~r~~~Gg~~~~~~~~~~ 447 (455)
T TIGR00838 391 ATAIERGKGLEELTLEELQKFSPEFDEDVYE-----------------------ALDPESSVEKRDAKGGTAPEEVLQAI 447 (455)
T ss_pred HHHHHcCCCHHHHHHHHHhhhcccCHHHHHH-----------------------HCCHHHHHHhccCCCCCCHHHHHHHH
Confidence 477889999987665321 22333444 66667777888999999999999888
Q ss_pred hhhhhc
Q psy7883 506 PQARSI 511 (607)
Q Consensus 506 ~~~~~~ 511 (607)
.+++.-
T Consensus 448 ~~~~~~ 453 (455)
T TIGR00838 448 AEAKAR 453 (455)
T ss_pred HHHHHh
Confidence 887763
No 21
>cd01597 pCLME prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like. This subgroup contains pCLME and related proteins, and belongs to the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.
Probab=100.00 E-value=8.1e-76 Score=642.26 Aligned_cols=411 Identities=24% Similarity=0.296 Sum_probs=349.2
Q ss_pred CCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCcccccc
Q psy7883 20 NDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIW 98 (607)
Q Consensus 20 ~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~ 98 (607)
++++||..+|+.+| ++++++++|++||.||++||.+.| ||++++++|.++|+++ +.+. +.+
T Consensus 2 ~~~~y~~~~~~~~~----------s~~~~i~~~~~ve~A~a~~l~~~Gii~~~~a~~I~~al~~~-~~~~-------~~~ 63 (437)
T cd01597 2 LGDLFGTPAMREIF----------SDENRVQAMLDVEAALARAQAELGVIPKEAAAEIAAAADVE-RLDL-------EAL 63 (437)
T ss_pred CccccCCHHHHHHc----------CcHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccc-CCCH-------HHH
Confidence 35799999999999 899999999999999999999999 9999999999998765 1111 111
Q ss_pred ccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 99 QTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKK 178 (607)
Q Consensus 99 ~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~l 178 (607)
..+.+++.|.. ..++..+.+++|++.|++ ||+||||||+++|+++|++|+.+. .+.+.|..|+++|.++
T Consensus 64 ~~~~~~~~~~v--~a~e~~l~e~~g~~~g~~--------lH~grSrnD~~~Ta~~l~lr~~l~-~l~~~l~~l~~~L~~~ 132 (437)
T cd01597 64 AEATARTGHPA--IPLVKQLTAACGDAAGEY--------VHWGATTQDIIDTALVLQLRDALD-LLERDLDALLDALARL 132 (437)
T ss_pred HHHHHHhCCCc--HHHHHHHHHHcCccccCe--------eecCccHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 22223333321 126677888888655554 456999999999999999999975 5999999999999999
Q ss_pred HHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHHHHHh
Q psy7883 179 SQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELT 258 (607)
Q Consensus 179 A~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~la~~L 258 (607)
|++|+|++||||||+||||||||||||++|+++|.||++||.+++++++.+||||+ +||+.+. +.++..+++++|++|
T Consensus 133 A~~~~~~~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGga-~Gtg~~~-~~~~~~~~~~~a~~L 210 (437)
T cd01597 133 AATHRDTPMVGRTHLQHALPITFGLKVAVWLSELLRHRERLDELRPRVLVVQFGGA-AGTLASL-GDQGLAVQEALAAEL 210 (437)
T ss_pred HHHhcCCeeehhhcCccceechHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccc-ccccccc-CCcHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999995 5776543 445667889999999
Q ss_pred CCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCC--CCCCCCCCCCCCChhHHHH
Q psy7883 259 GLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPTQVEA 336 (607)
Q Consensus 259 Gl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~~~E~ 336 (607)
||+.+ ..+ |+++||++++++++++.++++|+|||+||++|++ +|||||.+|+ .++|||||||||||+.+|.
T Consensus 211 Gf~~~-~~~---~~~~rd~~~e~~~~l~~~a~~l~rla~Dl~l~s~---~e~gel~~~~~~~~~GSSiMPqK~NP~~~E~ 283 (437)
T cd01597 211 GLGVP-AIP---WHTARDRIAELASFLALLTGTLGKIARDVYLLMQ---TEIGEVAEPFAKGRGGSSTMPHKRNPVGCEL 283 (437)
T ss_pred CCCCC-CCc---cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccceeecccCCCCCCCCCCCCCcCcHHHHH
Confidence 99974 333 6899999999999999999999999999999996 6999999996 6899999999999999999
Q ss_pred HHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhHH---
Q psy7883 337 LTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLV--- 413 (607)
Q Consensus 337 ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~la--- 413 (607)
++++|+++.|+..+++ ....++++++...+...+.+++....+...++.++..|+++|+||++||++++..++++.
T Consensus 284 i~~~a~~~~g~~~~~~-~~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~~~~~~~ae 362 (437)
T cd01597 284 IVALARRVPGLAALLL-DAMVQEHERDAGAWHAEWIALPEIFLLASGALEQAEFLLSGLEVNEDRMRANLDLTGGLILSE 362 (437)
T ss_pred HHHHHHHHHHHHHHHH-HhchhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccChHHHH
Confidence 9999999999976654 344478888876666667777666666667778999999999999999999998766543
Q ss_pred ---HhhCCCCCHHHHHHHH----HHHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCC
Q psy7883 414 ---TALNPHIGYDKAAEIA----KHAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYH 469 (607)
Q Consensus 414 ---t~La~~ig~~~Ah~ia----~~A~~~g~~l~e~l~~~----~~Ls~eel~~lldP~~~vg~~~~ 469 (607)
..|++++||++||+++ +++.++|+++.+.+.+. +.++++++++++||.+|+|+++.
T Consensus 363 ~l~~~l~~~i~~~~Ah~~v~~~~~~a~~~g~~~~~~~~~~~~~~~~l~~~~l~~~ldp~~~v~~a~~ 429 (437)
T cd01597 363 AVMMALAPKLGRQEAHDLVYEACMRAVEEGRPLREVLLEDPEVAAYLSDEELDALLDPANYLGSAPA 429 (437)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCCHHHHHHhChhhhccCCHHHHHHhcCHHHHhcchHH
Confidence 2567789999999985 45778899999998865 56899999999999999997664
No 22
>PRK08540 adenylosuccinate lyase; Reviewed
Probab=100.00 E-value=5.6e-76 Score=645.13 Aligned_cols=413 Identities=25% Similarity=0.322 Sum_probs=352.6
Q ss_pred cCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHH--HHcCccccCCcc
Q psy7883 18 VPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADE--VISGKLYEDHFP 94 (607)
Q Consensus 18 ~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~--i~~~~~~~~~~~ 94 (607)
.|.+.+|++..|+++| ++++++++|++||.||++||.++| ||++++++|.++|.+ +..... ...
T Consensus 4 ~~~~~~~~~~~~~~~~----------s~~~~~~~~l~ve~A~a~~l~~~Giip~~~a~~I~~~l~~~~i~~~~~--~~~- 70 (449)
T PRK08540 4 HPIDYRYGTPEMKRVW----------SEENKLQKMLDVEAALARAEAELGLIPEEAAEEINRKASTKYVKLERV--KEI- 70 (449)
T ss_pred CCcCcccCCHHHHHHc----------ChHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccccCCHHHH--HHH-
Confidence 5899999999999999 899999999999999999999999 999999999999876 421111 000
Q ss_pred ccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 95 LSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDA 174 (607)
Q Consensus 95 ~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~ 174 (607)
. ...++++ ++ +++.|++.+|++.|++ ||+|+|||||++|+++|++|+.+. .+.+.|..++++
T Consensus 71 -~---~~~~~~v-~~----~e~~L~~~~~~~~~~~--------vH~g~S~nDi~~Ta~~L~lr~~l~-~l~~~L~~l~~~ 132 (449)
T PRK08540 71 -E---AEIHHDI-MA----VVKALSEVCEGDAGEY--------VHFGATSNDIIDTATALQLKDSLE-ILEEKLKKLRGV 132 (449)
T ss_pred -H---HHhCCCc-HH----HHHHHHHHhhhhhhcc--------eecCccHhhHHhHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 0 1123343 44 7888888886556654 557999999999999999999875 599999999999
Q ss_pred HHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHH
Q psy7883 175 LDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRI 254 (607)
Q Consensus 175 L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~l 254 (607)
|.++|++|+|++||||||+||||||||||||++|+++|.||++||.+++++++.+|||| |+||+.+. ++++..+.+++
T Consensus 133 L~~~A~~~~~~~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-avGt~~a~-~~~~~~i~~~~ 210 (449)
T PRK08540 133 LLKKAEEHKNTVCIGRTHGQHAVPTTYGMRFAIWASEIQRHLERLEQLKPRVCVGQMTG-AVGTQAAF-GEKGIEIQKRV 210 (449)
T ss_pred HHHHHHHhcCCchhhhcCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHhhheccccc-cccchhhC-CCccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 68997544 55667788999
Q ss_pred HHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEc--CCCCCCCCCCCCCCChh
Q psy7883 255 SELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKL--PENEPGSSIMPGKVNPT 332 (607)
Q Consensus 255 a~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~l--p~~~~GSSiMPqKrNP~ 332 (607)
+++|||+.+.. |+ ++++||++++++++++.++++|+|||+||++|++ +|||||.+ |++++|||||||||||+
T Consensus 211 a~~LGl~~~~~-~~--~~~~rd~~~e~~~~l~~~a~~l~kia~Dl~l~s~---~e~gei~e~~~~~~~GSSiMP~K~NP~ 284 (449)
T PRK08540 211 MEILGLKPVLI-SN--QVIQRDRHAEFMMFLANIATTLDKIGLEIRNLQR---TEIGEVEEEFGKKQVGSSTMPHKRNPI 284 (449)
T ss_pred HHHcCCCCCCC-cC--CccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhhhhcccCCCCCCcCCCCCCcCcH
Confidence 99999997543 32 5799999999999999999999999999999995 79999986 45699999999999999
Q ss_pred HHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhh--hH
Q psy7883 333 QVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVND--SL 410 (607)
Q Consensus 333 ~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~--~~ 410 (607)
.+|+++++++++.|....+ +.....+++++...+..+|.+++.+..+.++++.++..++++|+||++||++|++. .+
T Consensus 285 ~~E~i~~~a~~~~g~~~~~-~~~~~~~~~rd~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~ 363 (449)
T PRK08540 285 TSEQICGLARVVRSNVEPA-LLNNPLWDERDLTNSSCERIIFPESCVLTDHILKLMIKVLEGLRFNPENIRRNLELTKGL 363 (449)
T ss_pred HHHHHHHHHHHHHHHHHHH-HhcchhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHHhcCH
Confidence 9999999999999987554 44555567777666666788999899999999999999999999999999999974 44
Q ss_pred hHHHhh----C-CCCCHHHHHHHHH----HHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCCc
Q psy7883 411 MLVTAL----N-PHIGYDKAAEIAK----HAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYHP 470 (607)
Q Consensus 411 ~lat~L----a-~~ig~~~Ah~ia~----~A~~~g~~l~e~l~~~----~~Ls~eel~~lldP~~~vg~~~~~ 470 (607)
.+++++ . +++||++||+++. .+.++|+++.|.+.+. +.|++++|+++|||.+|+|.++..
T Consensus 364 ~~ae~la~~L~~~glg~~~Ah~~v~~l~~~a~~~g~~l~e~~~~~~~~~~~l~~~~l~~~ldp~~~~g~a~~~ 436 (449)
T PRK08540 364 IMAEAVMIELAKRGMGRQEAHELVRQAAMKAHEEGRHLKEVLLEDEEVMKYLTEEELEELLDPETYIGTAPEI 436 (449)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHhChhhhccCCHHHHHHHcCHHHhcCchHHH
Confidence 444433 3 4799999998765 4778899999988875 568999999999999999987753
No 23
>TIGR00928 purB adenylosuccinate lyase. This family consists of adenylosuccinate lyase, the enzyme that catalyzes step 8 in the purine biosynthesis pathway for de novo synthesis of IMP and also the final reaction in the two-step sequence from IMP to AMP.
Probab=100.00 E-value=9.2e-76 Score=641.32 Aligned_cols=413 Identities=25% Similarity=0.296 Sum_probs=354.0
Q ss_pred CCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCcccccc
Q psy7883 20 NDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIW 98 (607)
Q Consensus 20 ~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~ 98 (607)
+|.+||+.+|+++| ++++++++|+++|+||++||.++| ||+++++.|.+++ ++....+ ..+ ...
T Consensus 1 ~~~~y~~~~~~~if----------s~~~~~~~~l~ve~A~a~~l~~~giip~~~a~~i~~~~-~~~~~d~--~~l--~~~ 65 (435)
T TIGR00928 1 LDERYGTPEMRAIW----------SEENKFKTWLDVEVALLRALAELGVIPAEAVKEIRAKA-NFTDVDL--ARI--KEI 65 (435)
T ss_pred CCcccCcHHHHHHh----------CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhC-CCCccCH--HHH--HHH
Confidence 46799999999999 899999999999999999999999 9999999998873 2210001 000 000
Q ss_pred ccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 99 QTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKK 178 (607)
Q Consensus 99 ~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~l 178 (607)
....++++ ++ +++.+++.+| +.|+ |||+|+||||+++|+++|++|+.+. .+.+.|..++++|.++
T Consensus 66 ~~~~~~~v-~~----~e~~l~~~~g-~~~~--------~vh~g~SsnD~~~Ta~~l~lr~~l~-~l~~~l~~l~~~L~~~ 130 (435)
T TIGR00928 66 EAVTRHDV-KA----VVYALKEKCG-AEGE--------FIHFGATSNDIVDTALALLLRDALE-IILPKLKQLIDRLKDL 130 (435)
T ss_pred HHHHCcCh-HH----HHHHHHHHhh-hhhh--------heeecccHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 11124443 33 7888888888 5555 4567999999999999999999865 6999999999999999
Q ss_pred HHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHHHHHh
Q psy7883 179 SQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELT 258 (607)
Q Consensus 179 A~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~la~~L 258 (607)
|++|+|++||||||+|||||||||||+++|+++|.|+++||.+++++++.+|||| |+||++++++++ ..+++++|++|
T Consensus 131 A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lgG-a~Gt~~~~~~~~-~~~~~~~a~~L 208 (435)
T TIGR00928 131 AVEYKDTVMLGRTHGQHAEPTTLGKKFALWADEMKRQLERLLQAKERIKVGGISG-AVGTHAAAYPLV-EEVEERVTEFL 208 (435)
T ss_pred HHHHccchHhHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccc-hhhhHhhccccH-HHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999988 589999998877 68899999999
Q ss_pred CCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCC--CCCCCCCCCCCCChhHHHH
Q psy7883 259 GLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPTQVEA 336 (607)
Q Consensus 259 Gl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~~~E~ 336 (607)
||+.+..+| ++++||+++++++++++++++|+|||+||++|++ +||+|+.+|. +++|||||||||||+.+|+
T Consensus 209 Gl~~~~~~~---~~~~rD~~~e~~~~l~~la~~L~ria~Dl~l~s~---~~~~el~~~~~~~~~GSS~MP~K~NP~~~E~ 282 (435)
T TIGR00928 209 GLKPVPIST---QIEPRDRHAELLDALALLATTLEKFAVDIRLLQR---TEHFEVEEPFGKGQVGSSAMPHKRNPIDFEN 282 (435)
T ss_pred CCCCCCCCc---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccceecccCCCCCCcCCCCcCcCcHHHHH
Confidence 999754332 7899999999999999999999999999999996 6999999885 3799999999999999999
Q ss_pred HHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhHH--H
Q psy7883 337 LTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLV--T 414 (607)
Q Consensus 337 ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~la--t 414 (607)
++++++++.|+...++. ...++++++.+.+...+.++++++.+..+++.++..|+++|+||++||++++..+++++ +
T Consensus 283 i~~~a~~~~g~~~~~~~-~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~a~ 361 (435)
T TIGR00928 283 VCGLARVIRSVLSPALE-NVPLWHERDLTDSSVERIILPDSFILADIMLKTTLKVVKKLVVNPENILRNLELTLGLIASE 361 (435)
T ss_pred HHHHHHHHHHHHHHHHH-HhhHHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccChHhHH
Confidence 99999999999877654 33678888888887778888999999999999999999999999999999999877643 3
Q ss_pred h----hC-CCCCHHHHHHHH----HHHHH-cCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCCcc
Q psy7883 415 A----LN-PHIGYDKAAEIA----KHAYK-TGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYHPY 471 (607)
Q Consensus 415 ~----La-~~ig~~~Ah~ia----~~A~~-~g~~l~e~l~~~----~~Ls~eel~~lldP~~~vg~~~~~~ 471 (607)
+ |+ .++||++||+++ +.+.+ +|.++.+.+.+. +.+++++++++|||.+|+|.+.+++
T Consensus 362 ~la~~L~~~g~g~~~Ah~~v~~~~~~a~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~ldp~~~~~~a~~~~ 432 (435)
T TIGR00928 362 RVLIALVERGMGREEAYEIVRELAMGAAEVDEPDLLEFLLADERITKYLKEEELAELLDPETYIGNAREIV 432 (435)
T ss_pred HHHHHHHHhCCChhhHHHHHHHHHHHHHHcccccHHHHHhhCccchhhcCHHHHHHcCCHHHHhChHHHHH
Confidence 3 33 379999999975 45667 899999988875 5689999999999999999876543
No 24
>PRK04833 argininosuccinate lyase; Provisional
Probab=100.00 E-value=5.3e-75 Score=637.08 Aligned_cols=428 Identities=19% Similarity=0.289 Sum_probs=361.5
Q ss_pred CCCchH--hhhhcccccCCCCCCCChHHHHHHHHH---HH--HHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCc
Q psy7883 22 KYYGAQ--TVRSLINFPIGGESERMPEAIISAMGI---LK--KAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHF 93 (607)
Q Consensus 22 ~~yg~~--~~rai~~f~~~~~~~~~~~~~i~a~l~---ve--~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~ 93 (607)
.+|+.. .+...| ++...++.++. |+ .||++||.++| ||++++++|.++|+++.+.. + .+
T Consensus 6 ~r~~~~~~~~~~~~----------~~~~~~d~~l~~~~i~~~~Aha~~l~e~Gii~~~~a~~I~~al~~i~~~~--~-~~ 72 (455)
T PRK04833 6 GRFTQAADQRFKQF----------NDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTADEQQQLEEALNELLEEV--R-AN 72 (455)
T ss_pred cccCCcchHHHHHH----------hccHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhh--h-cC
Confidence 467665 555666 55667777777 77 99999999999 99999999999999885421 0 11
Q ss_pred cccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 94 PLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHD 173 (607)
Q Consensus 94 ~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~ 173 (607)
+...++. ..++ +|++||++|++++| +.|++ +| +||||||+++|+++|++|+.+. .+.+.|..+++
T Consensus 73 ~~~~~~~-~~ed----v~~~ie~~L~~~~g-~~g~~--lH------~grSrnD~~~Ta~rl~~r~~l~-~l~~~l~~l~~ 137 (455)
T PRK04833 73 PQQILAS-DAED----IHSWVEGKLIDKVG-DLGKK--LH------TGRSRNDQVATDLKLWCKDQVA-ELLTALRQLQS 137 (455)
T ss_pred CcccCCC-CCch----HHHHHHHHHHHHhc-cccCc--cc------CCCCchhhHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 1222222 3455 66779999999998 66664 35 6999999999999999999976 59999999999
Q ss_pred HHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccc-cCCCCCCcchhHHHHH
Q psy7883 174 ALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQ 252 (607)
Q Consensus 174 ~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAv-GT~~~~d~~~~~~v~~ 252 (607)
+|.++|++|++|+||||||+|||||+||||||++|+++|.||++||.+++++++.+||||||+ ||++++|+ +
T Consensus 138 ~L~~~A~~~~~tvm~GrTH~Q~AqP~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGgaA~~GT~~~~dr-------~ 210 (455)
T PRK04833 138 ALVETAENNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGSGALAGTAYEIDR-------E 210 (455)
T ss_pred HHHHHHHHcCCCEEeccccCccceeccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCCCH-------H
Confidence 999999999999999999999999999999999999999999999999999999999999986 99999985 6
Q ss_pred HHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCC-CCCCCCCCCCCCh
Q psy7883 253 RISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNP 331 (607)
Q Consensus 253 ~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP 331 (607)
++|++|||+. +..|++|++++||+++++++++++++++|+|||+||++|+| +|||++++|+. ++|||||||||||
T Consensus 211 ~~a~~LGf~~-~~~n~~~a~~~rd~~~e~~~~l~~~a~~L~ria~Dl~l~ss---~e~g~~el~~~~~~gSSiMPqKrNP 286 (455)
T PRK04833 211 QLAGWLGFAS-ATRNSLDSVSDRDHVLELLSDASISMVHLSRFAEDLIFFNS---GEAGFVELSDRVTSGSSLMPQKKNP 286 (455)
T ss_pred HHHHHhCCCC-CCCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCceeeCCCCCCCcccCCCCCCC
Confidence 8999999997 68899999999999999999999999999999999999997 58998888875 7999999999999
Q ss_pred hHHHHHHHHHHHhhcchHHHHh--cccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhh
Q psy7883 332 TQVEALTMVAAQVMGNHVAVTV--GGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDS 409 (607)
Q Consensus 332 ~~~E~ir~~a~~v~G~~~~~~~--~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~ 409 (607)
+.+|+++++++++.|+..+++. .+.+..++++.+.+ ...+++.+..+.. ++.++..++++|+||+++|++++..+
T Consensus 287 ~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~rd~~~~--~~~l~~~~~~~~~-~l~~~~~~l~~l~v~~~rm~~~~~~g 363 (455)
T PRK04833 287 DALELIRGKCGRVQGALTGMLMTLKGLPLAYNKDMQED--KEGLFDALDTWLD-CLHMAALVLDGIQVKRPRCQEAAQQG 363 (455)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHHhCChHHHhhhhhhh--HHHHHHHHHHHHH-HHHHHHHHHhhCeECHHHHHHHHHcc
Confidence 9999999999999999988874 44555666664433 2335555566554 67888899999999999999999988
Q ss_pred HhHHHhhC----C-CCCHHHHHHHHH----HHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCcccCCCccccc
Q psy7883 410 LMLVTALN----P-HIGYDKAAEIAK----HAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETI 480 (607)
Q Consensus 410 ~~lat~La----~-~ig~~~Ah~ia~----~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~~~~~~~~~v~~~~ 480 (607)
+.++++++ . ++||++||+++. .+.++|+++.+ +..++++.+. +.+.+++.. +
T Consensus 364 ~~~a~~~a~~L~~~g~~~r~Ah~~v~~~~~~a~~~~~~~~~-------~~~~~~~~~~-----------~~~~~~~~~-~ 424 (455)
T PRK04833 364 YANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLED-------LPLAELQKFS-----------SVIGDDVYP-I 424 (455)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCChhh-------cCHHHHHHhc-----------ccchHHHHH-h
Confidence 88877664 2 699999999876 45677888887 7777787742 224677888 9
Q ss_pred cchHHHHHHHhhhccCCCCCCCCCchhhhh
Q psy7883 481 FHTEKVISQQILAAKVLPPWSRPSCPQARS 510 (607)
Q Consensus 481 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 510 (607)
++++++|+.+...||+.|..++.+..++++
T Consensus 425 l~p~~~v~~r~~~Gg~~~~~v~~~~~~~~~ 454 (455)
T PRK04833 425 LSLQSCLDKRAAKGGVSPQQVAQAIAAAKA 454 (455)
T ss_pred CCHHHHHHhccCCCCCCHHHHHHHHHHHhh
Confidence 999999999999999999999888877653
No 25
>PRK08470 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1e-74 Score=632.72 Aligned_cols=403 Identities=19% Similarity=0.221 Sum_probs=342.6
Q ss_pred CCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH-HHHcCccccCCcccccccc
Q psy7883 23 YYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAAD-EVISGKLYEDHFPLSIWQT 100 (607)
Q Consensus 23 ~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~-~i~~~~~~~~~~~~~~~~~ 100 (607)
+|++.+|+++| ++++++++|++||.||++||+++| ||++++++|.+++. .+.. . .....
T Consensus 4 ~y~~~~~~~i~----------s~~~~~~~~l~ve~A~a~al~~~G~Ip~~~a~~I~~~~~~d~~~--~-------~~~~~ 64 (442)
T PRK08470 4 RYAREEMKKKW----------TMQAKYDAWLEVEKAAVKAWNKLGLIPDSDCEKICKNAKFDIAR--I-------DEIEK 64 (442)
T ss_pred ccCcHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccchHH--H-------HHHHH
Confidence 89999999999 899999999999999999999999 99999999999883 1110 0 00011
Q ss_pred CCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 101 GSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQ 180 (607)
Q Consensus 101 ~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA~ 180 (607)
..++|++ . ++..+.+.+|+ .|+ |||+|+|||||+||+++|++|+.+ ..+.+.|..++++|.++|+
T Consensus 65 ~~~~dv~----~-~v~~L~e~~g~-~~~--------~vH~G~TsnDi~dTa~~L~lr~~l-~~l~~~l~~l~~~L~~lA~ 129 (442)
T PRK08470 65 TTKHDLI----A-FLTSVSESLGE-ESR--------FVHYGMTSSDCIDTAVALQMRDSL-KLIIEDVKNLMEAIKKRAL 129 (442)
T ss_pred ccCCChH----H-HHHHHHHHccc-ccc--------ceecCCChhchHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 2345542 2 33566778873 444 455799999999999999999987 4799999999999999999
Q ss_pred HhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHHHHHhCC
Q psy7883 181 EFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGL 260 (607)
Q Consensus 181 ~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~la~~LGl 260 (607)
+|++|+||||||+|||||||||||+++|+++|.|+++||.+++++++.+|||| |+||+.+.+ ..+++++|++|||
T Consensus 130 ~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~~lgG-AvGt~a~~~----~~v~~~~a~~LGl 204 (442)
T PRK08470 130 EHKDTLMVGRSHGIHGEPITFGLVLAIWYDEIKRHLKALEHTMEVISVGKISG-AMGNFAHAP----LELEELVCEELGL 204 (442)
T ss_pred HhCCCeeecccCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcc-hhcccccCC----hHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999987 679976553 4667899999999
Q ss_pred CCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcC--CCCCCCCCCCCCCChhHHHHHH
Q psy7883 261 PFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLP--ENEPGSSIMPGKVNPTQVEALT 338 (607)
Q Consensus 261 ~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp--~~~~GSSiMPqKrNP~~~E~ir 338 (607)
+.++++| ++++||+++|+++++++++++|+|||+||++|++ +||+|+.++ ++++|||+|||||||+.+|+++
T Consensus 205 ~~~~~~~---~v~~RD~~~e~~~~La~~a~~L~ria~Di~~l~~---~E~~ev~e~~~~g~~GSS~MPhKrNPv~~E~i~ 278 (442)
T PRK08470 205 KPAPVSN---QVIQRDRYARLASALALLASSCEKIAVAIRHLQR---TEVYEAEEYFSKGQKGSSAMPHKRNPVLSENIT 278 (442)
T ss_pred CCCCCCC---CccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccceecccCCCCCCCcCCCCCCcCcHHHHHHH
Confidence 9766776 6799999999999999999999999999999995 799999887 4589999999999999999999
Q ss_pred HHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhh--hHhHHH--
Q psy7883 339 MVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVND--SLMLVT-- 414 (607)
Q Consensus 339 ~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~--~~~lat-- 414 (607)
++++.+.|....+ +.+...++|++...+...|..++.++.+.+.++..+..++++|+||++||++|++. ++.+++
T Consensus 279 ~~a~~~~~~~~~~-~~~~~~~~eRD~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~nl~~~~g~~~ae~l 357 (442)
T PRK08470 279 GLCRVIRSFATPA-LENVALWHERDISHSSVERFILPDAFITTDFMLHRLNNVIENLVVYPENMMKNLNLTGGLVFSQRV 357 (442)
T ss_pred HHHHHHHHHHHHH-HHhchHhhccCCchhHHHhhhHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccChHHHHHH
Confidence 9999999986444 44556678888766555678888989999999999999999999999999999976 444444
Q ss_pred --hhCC-CCCHHHHHHHHH----HHHHc---CCC---------HHHHHHHc----CCCCHHHHhhhcCcccccCCCCCcc
Q psy7883 415 --ALNP-HIGYDKAAEIAK----HAYKT---GIT---------LKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYHPY 471 (607)
Q Consensus 415 --~La~-~ig~~~Ah~ia~----~A~~~---g~~---------l~e~l~~~----~~Ls~eel~~lldP~~~vg~~~~~~ 471 (607)
.|++ ++||++||+++. ++.++ |++ |.|.+.++ +.+++++|+++|||..|+|.+..++
T Consensus 358 ~~~L~~~G~~~~~Ah~~V~~~~~~a~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~~~dp~~~~g~~~~~~ 437 (442)
T PRK08470 358 LLELPKKGVSREDAYKIVQRNAMKVWEDLQQGKAAINEKGESLFLQALLNDEDLRKSLSEEEIRACFDYSYYTKNVDAIF 437 (442)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHhhcCCCccccccHHHHHHHHhcCHHhHhcCCHHHHHHHhCHHHHHhhHHHHH
Confidence 3444 699999999975 45566 888 99988764 4789999999999999999876653
No 26
>PRK06705 argininosuccinate lyase; Provisional
Probab=100.00 E-value=5.3e-75 Score=642.69 Aligned_cols=424 Identities=18% Similarity=0.202 Sum_probs=343.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCccccccccCCCcccccchhHHHHHHHHHHh
Q psy7883 44 MPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEML 122 (607)
Q Consensus 44 ~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~l 122 (607)
.++.+++.|+++++||++||.++| ||++++++|.++|.++.+.. .+.+.. ...++|+|++ ||.++++..
T Consensus 33 ~~~~~~~~~l~ve~Aha~~l~~~GiIp~e~a~~I~~al~~~~~~~--~~~l~~----~~~~edv~~~----ie~~l~~~~ 102 (502)
T PRK06705 33 QRNYLLKDMFQVHKAHIVMLTEENLMKKEEAKFILHALKKVEEIP--EEQLLY----TEQHEDLFFL----VEHLISQEA 102 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHhhhcc--cCcccc----CCCCCchHHH----HHHHHHHhc
Confidence 678999999999999999999999 99999999999998763311 223332 2357887666 888888887
Q ss_pred ccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchh
Q psy7883 123 GGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLG 202 (607)
Q Consensus 123 G~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG 202 (607)
|++.|+| +|+|||||||++|+++|++|+.+. .+...|..++++|.++|++|+||+||||||+|||||||||
T Consensus 103 G~~~g~~--------lH~GrSrnD~v~Ta~~L~lr~~l~-~l~~~l~~l~~~l~~~A~~~~~t~m~g~TH~Q~AqP~T~G 173 (502)
T PRK06705 103 KSDFVSN--------MHIGRSRNDMGVTMYRMSLRRYVL-RLMEHHLLLQESILQLAADHKETIMPAYTHTQPAQPTTFG 173 (502)
T ss_pred Cchhhcc--------ccCCCCHhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCEEecccCCccceehHHH
Confidence 7556775 345999999999999999999976 5999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccc-cCCCCCCcchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHH
Q psy7883 203 QEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEV 281 (607)
Q Consensus 203 ~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAv-GT~~~~d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~ 281 (607)
||+++|+++|.||++||.+++++++.+||||||. ||++++ .++++|++|||+. +..|+++++++||+++|+
T Consensus 174 ~~l~~~~~~l~r~~~rL~~~~~r~~~~plGgaag~gt~~~~-------~r~~~a~~LGf~~-~~~ns~~a~~~rD~~~e~ 245 (502)
T PRK06705 174 HYTLAIYDTMQRDLERMKKTYKLLNQSPMGAAALSTTSFPI-------KRERVADLLGFTN-VIENSYDAVAGADYLLEV 245 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcCCchhhhhccCCchH-------HHHHHHHHcCCCC-CcCCHHHHHhccHHHHHH
Confidence 9999999999999999999999999999999874 555543 3578999999997 677999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhcchHHHHhccccccc
Q psy7883 282 SGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHF 360 (607)
Q Consensus 282 ~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~ 360 (607)
++++++++++|+|||+||++|+| +|||+|++|+. ++|||||||||||+.+|+||++++++.|++.+++....+.++
T Consensus 246 ~~~la~~~~~L~Ria~Dl~~~ss---~e~g~iel~e~~~~gSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~l~~~~~~~~ 322 (502)
T PRK06705 246 SSLLMVMMTNTSRWIHDFLLLAT---KEYDGITVARPYVQISSIMPQKRNPVSIEHARAITSSALGEAFTVFQMIHNTPF 322 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC---CCCCeeeecCCCCCccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999997 58998889876 689999999999999999999999999999888754333222
Q ss_pred ccccchhhHHHhHHHHHHHHHHHH---HHHHHHhhhccccCHHHHHHhhhhhHhHHHhhC----C--CCCHHHHHHHHHH
Q psy7883 361 ELNVFKPLIVSNVLRSIRLLADTT---ESFTTKCVTGILPNEDTIAKHVNDSLMLVTALN----P--HIGYDKAAEIAKH 431 (607)
Q Consensus 361 e~~~~~~~~~~~ll~s~~~l~~~l---l~~~~~vl~gL~Vn~erm~~~l~~~~~lat~La----~--~ig~~~Ah~ia~~ 431 (607)
..+. + ..|.+.+.++...+.+ +..+..++++|+||++||++|+..++.++|+++ . ++||++||++|.+
T Consensus 323 ~~~~--d-~q~~~~~~~~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~g~~~At~la~~Lv~~~Gl~fr~Ah~iV~~ 399 (502)
T PRK06705 323 GDIV--D-TEDDLQPYLYKGIEKAIRVFCIMNAVIRTMKVEEDTLKRRSYKHAITITDFADVLTKNYGIPFRHAHHAASV 399 (502)
T ss_pred hhhh--h-hHhhhhhHHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHhcCchHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 2111 1 1344444444444444 677789999999999999999999888877653 3 6999999998764
Q ss_pred ----HHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCcccCCCccccccchHHHHHHHhhhccCCCCCCCCCchh
Q psy7883 432 ----AYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVISQQILAAKVLPPWSRPSCPQ 507 (607)
Q Consensus 432 ----A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 507 (607)
+.++|++|.+... ++....+.+. ++ ..+..+++.. +++++++|..+...||+.|..++.+..+
T Consensus 400 ~v~~a~~~~~~l~~~~~-------~~~~~~~~~~--~~---~~~~~~~l~~-~ldp~~~v~~r~~~Gg~~p~~v~~~~~~ 466 (502)
T PRK06705 400 IANMSLEQKKELHELCF-------KDVNIYLQEK--FK---IQLLEKEWEE-IISPEAFIQKRNVYGGPSKKEMERMINN 466 (502)
T ss_pred HHHHHHHhCCCHHHhhH-------HHHHhhhhhh--hh---hcCCHHHHHH-HCCHHHHHhhccCCCCCCHHHHHHHHHH
Confidence 5678888887443 2222211110 00 2222344555 7777888888899999999999999998
Q ss_pred hhhccc
Q psy7883 508 ARSIIR 513 (607)
Q Consensus 508 ~~~~~~ 513 (607)
+++.+.
T Consensus 467 ~~~~~~ 472 (502)
T PRK06705 467 RKELFR 472 (502)
T ss_pred HHHHHH
Confidence 887443
No 27
>PRK07492 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1.9e-74 Score=628.67 Aligned_cols=408 Identities=19% Similarity=0.230 Sum_probs=342.9
Q ss_pred CCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHH-HcCccccCCcccccc
Q psy7883 21 DKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEV-ISGKLYEDHFPLSIW 98 (607)
Q Consensus 21 ~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i-~~~~~~~~~~~~~~~ 98 (607)
..+|++.+|+++| ++++++++|++||.|++++++++| ||++++++|.+++... .+ + + .+...
T Consensus 2 ~~~y~~~~~~~i~----------s~~~~~~~~l~vE~ala~a~~~~g~ip~~aa~~i~~~~~~~~~d--~-~---~~~~~ 65 (435)
T PRK07492 2 IPRYSRPEMVAIW----------EPETKFRIWFEIEAHACEAQAELGVIPKEAAETIWEKGKDAEFD--V-A---RIDEI 65 (435)
T ss_pred CcccCcHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCcccCCC--H-H---HHHHH
Confidence 4689999999999 899999999999999999999999 9999999998876320 11 0 0 00000
Q ss_pred ccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 99 QTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKK 178 (607)
Q Consensus 99 ~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~l 178 (607)
....+.+ +-. +++.+++.+|+ .|+ |||+|+|||||+||+++|++|+.+ +.+.+.|..++++|.++
T Consensus 66 ~~~~~h~----v~a-~~~~L~~~~g~-~~~--------~vH~G~Ts~Di~dTa~~L~lr~~~-~~l~~~l~~l~~~L~~~ 130 (435)
T PRK07492 66 EAVTKHD----VIA-FLTHLAEFVGP-DAR--------FVHQGMTSSDVLDTCLNVQLVRAA-DLLLADLDRVLAALKKR 130 (435)
T ss_pred HHHhCCC----hHH-HHHHHHHHhhH-hhh--------hhcCCCChhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 0112222 222 55677888874 354 455799999999999999999986 56999999999999999
Q ss_pred HHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHHHHHh
Q psy7883 179 SQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELT 258 (607)
Q Consensus 179 A~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~la~~L 258 (607)
|++|+||+||||||+|||+|||||||+++|+++|.|+++||.+++++++++|||| |+||++++++ ++++++|++|
T Consensus 131 A~~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~~~~~~~~~lgG-AvGT~~~~~~----~~~~~~a~~L 205 (435)
T PRK07492 131 AFEHKDTPTIGRSHGIHAEPTTFGLKLARFYAEFARNRERLVAAREEIATCAISG-AVGTFANIDP----RVEEHVAKKL 205 (435)
T ss_pred HHHcCCCEEeeccCCccceehhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcc-cccCCccCCh----HHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999988 5799988874 5678999999
Q ss_pred CCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcC--CCCCCCCCCCCCCChhHHHH
Q psy7883 259 GLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLP--ENEPGSSIMPGKVNPTQVEA 336 (607)
Q Consensus 259 Gl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp--~~~~GSSiMPqKrNP~~~E~ 336 (607)
||+.++..+ ++++||+++++++++++++++|+|||+||++|++ +||+|+.++ ++++|||+|||||||+.+|+
T Consensus 206 Gl~~~~~~~---~v~~RD~~~e~~~~la~~~~~L~ria~Di~~l~~---~e~~El~e~~~~g~~GSS~MPhKrNP~~~E~ 279 (435)
T PRK07492 206 GLKPEPVST---QVIPRDRHAMFFATLGVIASSIERLAIEIRHLQR---TEVLEAEEFFSPGQKGSSAMPHKRNPVLTEN 279 (435)
T ss_pred CCCCCCccc---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccchhccccCCCCCCCCCCCCCCCcHHHHH
Confidence 999643332 4799999999999999999999999999999995 799999876 46899999999999999999
Q ss_pred HHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhh--hHhHHH
Q psy7883 337 LTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVND--SLMLVT 414 (607)
Q Consensus 337 ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~--~~~lat 414 (607)
++++++.+.|...++ +.+...+++++...+...|.+++.+..+.+.++..+..++++|+||++||++|++. .+.+++
T Consensus 280 i~~~a~~~~~~~~~~-~~~~~~~~eRD~~~~~~e~~~lp~~~~~~~~~l~~~~~~l~~L~v~~~rm~~nl~~~~g~i~ae 358 (435)
T PRK07492 280 LTGLARLVRSYVVPA-MENVALWHERDISHSSVERMIGPDATITLDFALNRLAGVIEKLVVYPENMLKNLNKFGGLVHSQ 358 (435)
T ss_pred HHHHHHHHHHHHHHH-HHhcchhhccCChHHHHhhhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhhcCChhHHH
Confidence 999999999986554 34456677877655555778889998888889999999999999999999999985 333443
Q ss_pred ----hhCC-CCCHHHHHHHHH----HHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCCcc
Q psy7883 415 ----ALNP-HIGYDKAAEIAK----HAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYHPY 471 (607)
Q Consensus 415 ----~La~-~ig~~~Ah~ia~----~A~~~g~~l~e~l~~~----~~Ls~eel~~lldP~~~vg~~~~~~ 471 (607)
.|++ ++||++||++++ ++.++|.+|.|.+.++ +.|+++||+++|||.+|+|.+..++
T Consensus 359 ~~~~~L~~~g~~r~~Ah~~V~~~~~~a~~~~~~l~e~l~~~~~~~~~l~~~el~~~~dp~~ylg~~~~~~ 428 (435)
T PRK07492 359 RVLLALTQAGVSREDAYRLVQRNAMKVWEQGGDFLEELKADPEVRAALSEEEIEELFDLGYHTKHVDTIF 428 (435)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHhCCHHhHhcCCHHHHHHHhCHHHHhcchHHHH
Confidence 4555 699999999875 4567899999998864 4789999999999999999887653
No 28
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=6e-74 Score=614.74 Aligned_cols=406 Identities=25% Similarity=0.347 Sum_probs=354.2
Q ss_pred CCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH-------HHHcCccccCC
Q psy7883 21 DKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAAD-------EVISGKLYEDH 92 (607)
Q Consensus 21 ~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~-------~i~~~~~~~~~ 92 (607)
+.+|++++|+++| ++++.+++|++||.|+++|++++| ||+++++.|.+++. .|.+.+.
T Consensus 2 ~~RY~~~em~~if----------S~~~~~~~~l~vE~ala~A~aelG~Ip~~a~~~I~~~~~~~~~d~~~i~eie~---- 67 (438)
T COG0015 2 DGRYSSPEMRAIF----------SEEAKLRAWLKVEAALARAQAELGVIPAEAAAEIDAAAAFAEFDLERIKEIEA---- 67 (438)
T ss_pred CcccCcHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhcccccCHHHHHHHHH----
Confidence 6799999999999 899999999999999999999999 99999999999863 1221110
Q ss_pred ccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 93 FPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLH 172 (607)
Q Consensus 93 ~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~ 172 (607)
..++| |-. +...+.+.+|++.+ .|||+|+|||||+||++.|++|+.+ ++|.+.|.+++
T Consensus 68 --------~t~Hd----V~a-~v~~l~e~~~~~~~--------~~VH~GaTS~DI~Dta~~L~lk~a~-~ii~~~l~~l~ 125 (438)
T COG0015 68 --------ETGHD----VKA-LVRALAEKVGEEAS--------EYVHFGATSQDIIDTALALQLKEAL-DLILPDLKRLI 125 (438)
T ss_pred --------HhCCC----cHH-HHHHHHHhcCcccc--------cceecccchHHHHhHHHHHHHHHHH-HHHHHHHHHHH
Confidence 01222 122 23455677774332 2677899999999999999999875 68999999999
Q ss_pred HHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHH
Q psy7883 173 DALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQ 252 (607)
Q Consensus 173 ~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~ 252 (607)
+.|.++|.+|+|++|+||||+|||+|||||++++.|+++|.|+++||.++.+++..+++|| |+||..+. ++.+..+++
T Consensus 126 ~~L~~~A~~~k~t~m~GRTHgq~A~PtT~G~k~A~w~~el~R~~~rL~~~~~~~~~g~i~G-a~Gt~Aa~-~~~~~~ve~ 203 (438)
T COG0015 126 EALAELALEHKDTPMLGRTHGQPAEPTTFGKKFANWLAELLRHLERLEEAEERIIVGKIGG-AVGTLAAL-GDLGAEVEE 203 (438)
T ss_pred HHHHHHHHHhCCCeecccccCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccc-chhhHhhc-CchhHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 57996554 566788999
Q ss_pred HHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcC--CCCCCCCCCCCCCC
Q psy7883 253 RISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLP--ENEPGSSIMPGKVN 330 (607)
Q Consensus 253 ~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp--~~~~GSSiMPqKrN 330 (607)
++++.|||...+.++ |+.+||++++|+++|++++++|.|||.||++|+ ++|++||.+| ++++|||+||||||
T Consensus 204 ~v~e~LGL~~~p~st---q~~~RD~~ae~~~~La~i~~sl~k~a~dIr~l~---~~e~~Ev~E~f~~gq~GSSaMPHKrN 277 (438)
T COG0015 204 RVAEKLGLKPAPIST---QVSPRDRIAEFFSALALLAGSLEKFARDIRLLQ---RTEVGEVEEPFAKGQVGSSAMPHKRN 277 (438)
T ss_pred HHHHHcCCCCCCCCc---ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccccccccccCCCCCCCCCCCcccC
Confidence 999999999767766 899999999999999999999999999999999 5899999988 46999999999999
Q ss_pred hhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhH
Q psy7883 331 PTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSL 410 (607)
Q Consensus 331 P~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~ 410 (607)
|+.+|++.++++.+.+....++.+. ..|+|++...+...|..+|..+.+++.++..+.+++++|+||+++|++||+..+
T Consensus 278 Pi~~E~~~glar~~r~~~~~~~e~~-~~whERdlt~ssver~~Lp~~~~~~~~aL~~~~~vl~~L~v~~~~m~~nL~~~~ 356 (438)
T COG0015 278 PIDSENVTGLARVARALVSTLLENL-VLWHERDLTDSSVERVILPDAFIAADGALNRLLNVLEGLEVNPERMRRNLDLTL 356 (438)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHh-HHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCHHHHHHHHhhcc
Confidence 9999999999999999887776665 789999988888889999999999999999999999999999999999999887
Q ss_pred hHH------HhhCC-CCCHHHHHHHHH----HHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCCcc
Q psy7883 411 MLV------TALNP-HIGYDKAAEIAK----HAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYHPY 471 (607)
Q Consensus 411 ~la------t~La~-~ig~~~Ah~ia~----~A~~~g~~l~e~l~~~----~~Ls~eel~~lldP~~~vg~~~~~~ 471 (607)
+++ .++.+ ++||++||++++ .+.++++++.+.+..+ +++++++++++|||.+|+|.+++++
T Consensus 357 gli~se~v~~~l~~~g~~Re~a~elvr~~a~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~dp~~y~G~a~~i~ 432 (438)
T COG0015 357 GLIASERVMLALRKKGMGREEAHELVREKAMKAWEQGKEFLELLLADERVTKYLSEEELLELLDPANYLGRADEIV 432 (438)
T ss_pred chhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccchHHHhccchhhhccCcHHHHHHcCCHHHHhhHHHHHH
Confidence 653 24555 899999999975 4678889997776653 5899999999999999999986554
No 29
>PRK07380 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1.7e-73 Score=620.54 Aligned_cols=404 Identities=21% Similarity=0.247 Sum_probs=340.6
Q ss_pred CCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCccccccccC
Q psy7883 23 YYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTG 101 (607)
Q Consensus 23 ~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~~~~ 101 (607)
+|++.+|+++| ++++++++|++||.|++++++++| ||++.+++|.+++ ++.-.++ ......
T Consensus 4 ~y~~~~~~~~f----------s~~~~~~~~l~vE~ala~a~~~~g~ip~~aa~~i~~~~-~~d~~~i-------~~~~~~ 65 (431)
T PRK07380 4 RYTLPEMGNIW----------TDTAKFQTWLDVEIAVCEAQAELGKIPQEAVEEIKAKA-NFDPQRI-------LEIEAE 65 (431)
T ss_pred ccCcHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcc-CCCHHHH-------HHHHHH
Confidence 89999999999 899999999999999999999999 9999999998765 2200000 000011
Q ss_pred CCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 102 SGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQE 181 (607)
Q Consensus 102 ~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA~~ 181 (607)
.++| |-.+ .+.+.+.+| +.|+ |||+|+|||||++|+++|++|+.+ ..+.+.|.+++++|.++|++
T Consensus 66 ~~h~----v~a~-v~~l~~~~g-~~~~--------~vH~G~Ts~Di~dTa~~L~lr~~l-~~l~~~l~~l~~~L~~lA~~ 130 (431)
T PRK07380 66 VRHD----VIAF-LTNVNEYVG-DAGR--------YIHLGMTSSDVLDTGLALQLVASL-DLLLEELEDLIQAIRYQARE 130 (431)
T ss_pred hCCC----hHHH-HHHHHHHHH-Hhhc--------cccCCCChhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 2233 2222 234567777 4555 455799999999999999999987 56999999999999999999
Q ss_pred hcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHHHHHhCCC
Q psy7883 182 FQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLP 261 (607)
Q Consensus 182 ~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~la~~LGl~ 261 (607)
|+||+||||||+|||||||||||+++|+++|.|+++||.+++++++.+|||| |+||++++++ ++.+++++.|||+
T Consensus 131 ~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~~l~G-AvGt~~~~~~----~~~~~~a~~LGl~ 205 (431)
T PRK07380 131 HRNTVMIGRSHGIHAEPITFGFKLAGWLAETLRNRERLVRLREDIAVGQISG-AVGTYANTDP----RVEAITCQKLGLK 205 (431)
T ss_pred cCCCeeechhcCccceechHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcch-hhcCcccCCh----hHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999976 5799988875 4567899999999
Q ss_pred CcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcC--CCCCCCCCCCCCCChhHHHHHHH
Q psy7883 262 FKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLP--ENEPGSSIMPGKVNPTQVEALTM 339 (607)
Q Consensus 262 ~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp--~~~~GSSiMPqKrNP~~~E~ir~ 339 (607)
.++.+ +++++||+++++++++++++++|+|||+||++|++ +||+|+.++ .+++|||+|||||||+.+|++++
T Consensus 206 ~~~~~---~~v~~rd~~~e~~~~la~~a~~L~kia~Di~~l~~---~~~~el~e~~~~g~~GSS~MPhKrNP~~~E~i~~ 279 (431)
T PRK07380 206 PDTAS---TQVISRDRHAEYVQTLALVGASLERFATEIRNLQR---TDVLEVEEYFAKGQKGSSAMPHKRNPIRSERLSG 279 (431)
T ss_pred CCCCC---CCccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCceeecccCCCCCCCCcCCCCCCCCHHHHHHHH
Confidence 75433 26799999999999999999999999999999994 799999765 45899999999999999999999
Q ss_pred HHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhh--hhHhHHH---
Q psy7883 340 VAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVN--DSLMLVT--- 414 (607)
Q Consensus 340 ~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~--~~~~lat--- 414 (607)
+|+.+.|...++ +.+...++|++...+..+|..++.+..+.+.++..+..++++|+||+++|++|++ .++.+++
T Consensus 280 ~a~~~~g~~~~~-~~~~~~~~eRD~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~L~v~~~rm~~nl~~~~g~~~ae~~~ 358 (431)
T PRK07380 280 LARVLRSYAVAA-LENVALWHERDISHSSVERVMLPDCSILLHFMLREMTDLVKNLLVYPENMRRNMNIYGGVVFSQRVL 358 (431)
T ss_pred HHHHHHHHHHHH-HHhchhhhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhcCChHHHHHHH
Confidence 999999998764 4455567788876555578889999888888999999999999999999999997 4444444
Q ss_pred -hhCC-CCCHHHHHHHHH----HHHH-cCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCCcc
Q psy7883 415 -ALNP-HIGYDKAAEIAK----HAYK-TGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYHPY 471 (607)
Q Consensus 415 -~La~-~ig~~~Ah~ia~----~A~~-~g~~l~e~l~~~----~~Ls~eel~~lldP~~~vg~~~~~~ 471 (607)
.|++ ++||++||+++. ++.+ +|.+|.|++.++ +.|+++||+++|||..|+|.+..++
T Consensus 359 ~~Lv~~gl~r~~Ah~~V~~~~~~a~~~~~~~l~e~l~~~~~~~~~l~~~~l~~~~dp~~ylg~~~~~~ 426 (431)
T PRK07380 359 LALVEKGMSREEAYRLVQKNAHTAWNTEGGNFRANLEADPEVTQLLSAAELADCFDPQLHLKNLDVIY 426 (431)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHhCCCHHHHHHcChHhhhcCCHHHHHHhhCHHHHhcchHHHH
Confidence 4445 699999999875 5667 899999999875 4789999999999999999877654
No 30
>PRK06390 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1.9e-73 Score=624.90 Aligned_cols=416 Identities=22% Similarity=0.295 Sum_probs=346.0
Q ss_pred cccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCcc
Q psy7883 16 LEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFP 94 (607)
Q Consensus 16 ~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~ 94 (607)
+..|.+.+||+.+|+++| ++++++++|++||.||++||.++| ||++++++|.++|..... +. ..
T Consensus 2 ~~~~~~~~y~~~~~~~i~----------s~~~~~~~~l~ve~A~a~al~~~Giip~~~a~~I~~~l~~~~~-d~-~~--- 66 (451)
T PRK06390 2 VVSPIEYRYGRDQVKYIF----------DDENRLRYMLKVEAAIAKAEYEYGIIPRDAFLDIKNAVDSNSV-RL-ER--- 66 (451)
T ss_pred CCCCcCcccCCHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccccC-CH-HH---
Confidence 457999999999999999 899999999999999999999999 999999999999865311 11 00
Q ss_pred ccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 95 LSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDA 174 (607)
Q Consensus 95 ~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~ 174 (607)
+.......++|+ ++ ++..+++.+| +.|++ ||+|+|||||++|+++|++|+.+. .+.+.|..|+++
T Consensus 67 ~~~~~~~~~~dv-~~----~~~~L~~~~g-~~~~~--------iH~G~SsnDi~~Ta~~L~lr~~l~-~l~~~l~~l~~~ 131 (451)
T PRK06390 67 VREIESEIKHDV-MA----LVEALSEQCS-AGKNY--------VHFGVTSNDINDTATALQIHDFVS-IIKDDIKNLMET 131 (451)
T ss_pred HHHHHHHhCCCc-HH----HHHHHHHHhh-hhhhh--------eecCccHhhhHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 000112235565 34 7778888887 55654 456999999999999999999875 699999999999
Q ss_pred HHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHH
Q psy7883 175 LDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRI 254 (607)
Q Consensus 175 L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~l 254 (607)
|.++|++|++|+||||||+||||||||||||++|+++|.||++||.+++++++.+++|| ++||+...+.. ...+++++
T Consensus 132 L~~lA~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~r~~~~~~~g-avGt~a~~g~~-~~~~~~~~ 209 (451)
T PRK06390 132 LIKLIDEYKDSPMMGRTHGQHASPITFGLKFAVYLDEMSRHLDRLTEMGDRAFAGKVLG-PVGTGAALGKD-ALDIQNRV 209 (451)
T ss_pred HHHHHHHhCCCchhhhhCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCC-hhcChhhCCCc-HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 68997776443 56788999
Q ss_pred HHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEE--cC-CCCCCCCCCCCCCCh
Q psy7883 255 SELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELK--LP-ENEPGSSIMPGKVNP 331 (607)
Q Consensus 255 a~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~--lp-~~~~GSSiMPqKrNP 331 (607)
+++|||+.+ +..+++++||+++++++++++++++|+|||+||++|+| +|||||. ++ ++++|||||||||||
T Consensus 210 a~~LGl~~~---~~~~~~~~rD~~~e~~~~l~~la~~l~kia~Di~l~ss---~e~g~v~E~~~~~~~~GSSiMP~KrNP 283 (451)
T PRK06390 210 MEILGIYSE---IGSTQIVNRDRYIEYLSVINGISVTLEKIATEIRNLQR---PEIDEVSEYFDEESQVGSSSMPSKVNP 283 (451)
T ss_pred HHHcCCCCC---CCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccchhhcccccCCCCCccCCCCCCCc
Confidence 999999974 23347899999999999999999999999999999997 5788885 33 469999999999999
Q ss_pred hHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHh
Q psy7883 332 TQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLM 411 (607)
Q Consensus 332 ~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~ 411 (607)
+.+|.+++++..+.+... ..+.....+++++...+...|..++.+..+.+.++..+..++++|+||++||++|++..+.
T Consensus 284 v~~E~i~~~a~~~~~l~~-~~~~~~~~~~erd~~~~~~e~~~~~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~ 362 (451)
T PRK06390 284 INSENVVSLSRFIRSLII-PEYEAGVTWHERDLTNSALERFTIPYASILIDYVLYNMNDVLSHLIIKEDEIRRNLESDDS 362 (451)
T ss_pred HHHHHHHHHHHHHHHhHH-HHHHhhhHhhccCCcchHHHHhhHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHhccch
Confidence 999999999977776655 3332223336766555555666778887778888899999999999999999999998444
Q ss_pred H-----HHhhCC-CCCHHHHHHHHH----HHHHcCCCHHHHHHHcC---CCCHHHHhhhcCcccccCCCCCc
Q psy7883 412 L-----VTALNP-HIGYDKAAEIAK----HAYKTGITLKEAAVKLG---YLTEQEYDQWVKPEKMLGPEYHP 470 (607)
Q Consensus 412 l-----at~La~-~ig~~~Ah~ia~----~A~~~g~~l~e~l~~~~---~Ls~eel~~lldP~~~vg~~~~~ 470 (607)
+ ++.|++ ++||++||+++. ++.++|+++.+++.+.+ .++++++++++||.+|+|.+++.
T Consensus 363 ~~se~la~~L~~~G~~~~~Ah~~v~~~~~~a~~~g~~l~~~~~~~~~~~~l~~~~l~~~ldP~~~i~~a~~~ 434 (451)
T PRK06390 363 IMSESIVRALTLSGMPRQDAHEFVRRASMEARSNGKSLKSSLIEAGILKYIDEKTLDRAMDPANFIGQAPSI 434 (451)
T ss_pred hhHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHhChhhhcCCHHHHHHhcCHHHHhhhhHHH
Confidence 3 445665 699999999865 46778999999887753 48999999999999999965543
No 31
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL). This group contains ASAL and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASAL is a cytosolic enzyme which catalyzes the reversible breakdown of argininosuccinate to arginine and fumarate during arginine biosynthesis. In ureotelic species ASAL also catalyzes a reaction involved in the production of urea. Included in this group are the major soluble avian eye lens proteins from duck, delta 1 and delta 2 crystallin. Of these two isoforms only delta 2 has retained ASAL activity. These crystallins may have evolved by, gene recruitment of ASAL followed by gene duplication.
Probab=100.00 E-value=9.8e-73 Score=617.81 Aligned_cols=389 Identities=23% Similarity=0.298 Sum_probs=330.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCccccccccCCCcccccchhHHHHHHHHHHh
Q psy7883 44 MPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEML 122 (607)
Q Consensus 44 ~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~l 122 (607)
.+++++++|+.+++||++||.++| ||++++++|.++|+++.++ +..+.|+.+. .+++.|++ ++..+++++
T Consensus 4 ~d~~~~~~~~~ve~A~a~al~~~Gii~~~~a~~I~~al~~~~~~-~~~~~~~~~~----~~~~~~~~----~e~~l~~~~ 74 (435)
T cd01359 4 FDRRLFEEDIAGSIAHAVMLAEQGILTEEEAAKILAGLAKIRAE-IEAGAFELDP----EDEDIHMA----IERRLIERI 74 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhh-cccCCccCCC----CCCcHHHH----HHHHHHHHH
Confidence 578999999999999999999999 9999999999999988653 2234555542 46777888 555667777
Q ss_pred ccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchh
Q psy7883 123 GGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLG 202 (607)
Q Consensus 123 G~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG 202 (607)
| +.|++ ||+|+||||+++|+++|++|+.+. .+.+.|..++++|.++|++|+||+||||||+|||||||||
T Consensus 75 g-~~~~~--------iH~G~SsnDi~~Ta~~L~lr~~l~-~l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~T~G 144 (435)
T cd01359 75 G-DVGGK--------LHTGRSRNDQVATDLRLYLRDALL-ELLELLLDLQRALLDRAEEHADTIMPGYTHLQRAQPITFG 144 (435)
T ss_pred H-HHHhh--------hhccCCHHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCEecCCCCCccceeccHH
Confidence 7 55553 456999999999999999999976 5999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccc-cCCCCCCcchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHH
Q psy7883 203 QEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEV 281 (607)
Q Consensus 203 ~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAv-GT~~~~d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~ 281 (607)
||+++|+++|.|+++||.+++++++.+||||++. ||++++++ +++|++|||+. +..|+++++++||+++++
T Consensus 145 ~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgaag~gt~~~~~~-------~~~a~~LG~~~-~~~~~~~a~~~rd~~~e~ 216 (435)
T cd01359 145 HYLLAYAEMLERDLERLADAYKRVNVSPLGAGALAGTTFPIDR-------ERTAELLGFDG-PTENSLDAVSDRDFVLEF 216 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcCCcccccccCCCCCCCH-------HHHHHHcCCCC-CccCHHHHHhcchHHHHH
Confidence 9999999999999999999999999999999875 77777665 57999999995 778888999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhcchHHHHhccc--cc
Q psy7883 282 SGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGS--NG 358 (607)
Q Consensus 282 ~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~--~~ 358 (607)
++++++++++|+|||+||++|++ +|||||.+|+. ++|||||||||||+.+|+++++++++.|...+++.... ..
T Consensus 217 ~~~l~~~a~~l~ria~Dl~l~~~---~e~gev~lpe~~~~GSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~ 293 (435)
T cd01359 217 LSAAALLMVHLSRLAEDLILWST---QEFGFVELPDAYSTGSSIMPQKKNPDVLELIRGKAGRVIGALAGLLTTLKGLPL 293 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC---CCCCeeeCCCCCCCccccCCCCCCCcHHHHHHHHHHHHhhHHhHHHHHhcCCCC
Confidence 99999999999999999999997 58999999987 58999999999999999999999999999988875432 34
Q ss_pred ccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhHHHhhC------CCCCHHHHHHHHH--
Q psy7883 359 HFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALN------PHIGYDKAAEIAK-- 430 (607)
Q Consensus 359 ~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~lat~La------~~ig~~~Ah~ia~-- 430 (607)
+++++... .+..++.+..+...++..+..+|++|+||+++|++++..+++++++++ .++||++||+++.
T Consensus 294 ~~~~d~~~---~~~~l~~~~~~~~~al~~~~~~l~~l~v~~~~m~~~l~~~~~~a~~l~~~l~~~~g~~~r~Ah~~v~~~ 370 (435)
T cd01359 294 AYNKDLQE---DKEPLFDAVDTLIASLRLLTGVISTLTVNPERMREAAEAGFSTATDLADYLVREKGVPFREAHHIVGRA 370 (435)
T ss_pred ccchhHHH---hhHHHHHHHHHHHHHHHHHHHHHhhCEECHHHHHHHHhcCccHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 45544322 233444444555556667778999999999999999998888877654 4799999999764
Q ss_pred --HHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccC
Q psy7883 431 --HAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLG 465 (607)
Q Consensus 431 --~A~~~g~~l~e~l~~~----~~Ls~eel~~lldP~~~vg 465 (607)
++.++|+++.|.+.+. +.+++++++++|||.+|+|
T Consensus 371 ~~~a~~~g~~~~~~~~~~~~~~~~l~~~~l~~~ldp~~~~~ 411 (435)
T cd01359 371 VRLAEEKGKDLSDLTLAELQAISPLFEEDVREALDPENSVE 411 (435)
T ss_pred HHHHHHcCCChhhcCHHHHHhhcccCHHHHHHhCCHHHHHH
Confidence 5677899999876654 6688899998888877775
No 32
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL)_subgroup 2. This subgroup contains mainly eukaryotic proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). ASL deficiency has been linked to several pathologies including psychomotor retardation with autistic features, epilepsy and muscle wasting.
Probab=100.00 E-value=5.2e-71 Score=602.99 Aligned_cols=407 Identities=18% Similarity=0.177 Sum_probs=344.3
Q ss_pred CCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC--CCHHHHHHHHHHHHHHHcCccccCCccccc
Q psy7883 20 NDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG--LDSKIADTISKAADEVISGKLYEDHFPLSI 97 (607)
Q Consensus 20 ~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G--Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~ 97 (607)
+|.+|+++.|+++| ++++++++|+++|.|++++++++| ||++.++.|.+++.++ + . + .+..
T Consensus 1 ~~~ry~~~~~~~~f----------s~~~~~~~~l~~e~ala~a~~~~g~~ip~~~a~~i~~~~~~~-d--~-~---~i~~ 63 (436)
T cd03302 1 LASRYASKEMVYIF----------SPRKKFSTWRKLWLWLAEAEKELGLDISDEQIEEMKANVENI-D--F-E---IAAA 63 (436)
T ss_pred CCCCcCCHHHHHHc----------ChHHHHHHHHHHHHHHHHhhHHhCCCCCHHHHHHHHHhhhcC-C--H-H---HHHH
Confidence 46799999999999 899999999999999999999999 7999999998887221 1 0 0 0000
Q ss_pred cccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 98 WQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDK 177 (607)
Q Consensus 98 ~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~ 177 (607)
.....+.|+ .. ++..+.+.+| +.|+ |||+|+||||+++|++.|++|+.+ ..+.+.|..++++|.+
T Consensus 64 ~e~~~~hdv----~a-~~~~l~~~~~-~~~~--------~vH~G~TS~Di~dta~~L~lr~a~-~~l~~~L~~l~~~L~~ 128 (436)
T cd03302 64 EEKKLRHDV----MA-HVHAFGLLCP-AAAG--------IIHLGATSCFVTDNTDLIQIRDAL-DLILPKLAAVIDRLAE 128 (436)
T ss_pred HHHHhCcCc----hH-HHHHHHHHhH-hccC--------eeeeCcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 011123342 22 2345677787 4555 455699999999999999999987 5699999999999999
Q ss_pred HHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCC------CCCcchhHHHH
Q psy7883 178 KSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGL------NTYVGFAENCT 251 (607)
Q Consensus 178 lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~------~~d~~~~~~v~ 251 (607)
+|++|+||+||||||+||||||||||||++|+++|.|+++||.+++++++.+++||+ +||+. +.+++.+.++.
T Consensus 129 ~A~~~~dt~m~GrTH~Q~A~P~TfG~~~a~~~~~L~r~~~RL~~~~~~~~~~~~~Ga-vGt~a~~~~~~~~dr~~~~~v~ 207 (436)
T cd03302 129 FALEYKDLPTLGFTHYQPAQLTTVGKRACLWIQDLLMDLRNLERLRDDLRFRGVKGT-TGTQASFLDLFEGDHDKVEALD 207 (436)
T ss_pred HHHHhCCCeeeccccCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCh-hhhhHHHHhcCCchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999984 68752 23444467888
Q ss_pred HHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcC--CCCCCCCCCCCCC
Q psy7883 252 QRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLP--ENEPGSSIMPGKV 329 (607)
Q Consensus 252 ~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp--~~~~GSSiMPqKr 329 (607)
+++|++|||..+ . +..+++++||+++|+++++++++++|+|||+||++|+| +|||.+| .+++|||||||||
T Consensus 208 ~~~a~~LGl~~~-~-~~~~~v~~rD~~~e~~~~la~~a~~L~riA~Dl~l~~s-----~~el~e~~~~g~~GSS~MPhKr 280 (436)
T cd03302 208 ELVTKKAGFKKV-Y-PVTGQTYSRKVDIDVLNALSSLGATAHKIATDIRLLAN-----LKEVEEPFEKGQIGSSAMPYKR 280 (436)
T ss_pred HHHHHHcCCCCC-C-CchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----CceecccccCCCCCcccCCCcc
Confidence 999999999963 2 33457899999999999999999999999999999995 8899988 4589999999999
Q ss_pred ChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhh
Q psy7883 330 NPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDS 409 (607)
Q Consensus 330 NP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~ 409 (607)
||+.+|+++++|+.+.|++.+++.....+++|+|...+...|..++++..+.++++..+..++++|+||++||++|++.+
T Consensus 281 NPv~~E~i~~~a~~~~g~~~~~~~~~~~~~~Erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~ 360 (436)
T cd03302 281 NPMRSERCCSLARHLMNLASNAAQTASTQWFERTLDDSANRRIAIPEAFLAADAILITLQNISEGLVVYPKVIERHIRQE 360 (436)
T ss_pred CcHHHHHHHHHHHHHHhhHHHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhc
Confidence 99999999999999999998888777788999998888778888999999999999999999999999999999999986
Q ss_pred Hh--HH----HhhCC-CCCHHHHHHHHH----HHHHc------CCCHHHHHHHcCC--CCHHHHhhhcCcccccCC
Q psy7883 410 LM--LV----TALNP-HIGYDKAAEIAK----HAYKT------GITLKEAAVKLGY--LTEQEYDQWVKPEKMLGP 466 (607)
Q Consensus 410 ~~--la----t~La~-~ig~~~Ah~ia~----~A~~~------g~~l~e~l~~~~~--Ls~eel~~lldP~~~vg~ 466 (607)
.. ++ ..|++ ++||++||+++. ++.++ |.+|.|++.++.. -+++||+++|||..|+|.
T Consensus 361 ~g~~~se~~~~~L~~~g~~~~~Ah~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~dp~~~~g~ 436 (436)
T cd03302 361 LPFMATENIIMAAVKAGGDRQDAHERIRVLSHQAAAVVKQEGGDNDLIERIKNDAYFKPIWDELDALLDPKTFIGR 436 (436)
T ss_pred cChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHhcCCCcCCCHHHHHHHhCHHhhhCc
Confidence 43 32 24555 699999999876 45667 9999999997531 188999999999999984
No 33
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL)_subgroup 1. This subgroup contains bacterial and archeal proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=3.2e-71 Score=596.82 Aligned_cols=364 Identities=22% Similarity=0.307 Sum_probs=308.9
Q ss_pred CCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCccccccccC
Q psy7883 23 YYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTG 101 (607)
Q Consensus 23 ~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~~~~ 101 (607)
+||+..++++| ++++++++|++||.||++||.+.| ||++++++|.++|+...+ +. . .+ . ..
T Consensus 1 ~~~~~~~~~~f----------s~~~~~~~~l~ve~A~a~~l~~~Glip~~~a~~I~~~l~~~~~-~~-~-~~--~---~~ 62 (387)
T cd01360 1 RYGRPEMKKIW----------SEENKFRKWLEVEAAVCEAWAKLGVIPAEAAEEIRKKAKFDVE-RV-K-EI--E---AE 62 (387)
T ss_pred CCCchHHHHHh----------CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhhcCHH-HH-H-HH--H---HH
Confidence 59999999999 899999999999999999999999 999999999999864221 11 0 00 0 11
Q ss_pred CCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 102 SGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQE 181 (607)
Q Consensus 102 ~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA~~ 181 (607)
.++++ ++ ++..|++++|+ .|+ |||+|+|||||++|+++|++|+.+. .+.+.|..++++|.++|++
T Consensus 63 ~~~dv-~~----~e~~L~~~~g~-~~~--------~lH~G~S~nDi~~ta~~L~lr~~l~-~l~~~l~~l~~~L~~~A~~ 127 (387)
T cd01360 63 TKHDV-IA----FVTAIAEYCGE-AGR--------YIHFGLTSSDVVDTALALQLREALD-IILKDLKELLEVLKKKALE 127 (387)
T ss_pred hCCCh-HH----HHHHHHHHHHH-hhh--------heeCCCChhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 33443 23 67778888883 555 4567999999999999999999875 5999999999999999999
Q ss_pred hcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHHHHHhCCC
Q psy7883 182 FQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLP 261 (607)
Q Consensus 182 ~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~la~~LGl~ 261 (607)
|+||+||||||+|||||||||||+++|+++|.||++||.+++++++.+||||+ +||+.+.+ ..++++++++|||+
T Consensus 128 ~~~t~m~grTH~Q~A~P~TfG~~l~~~~~~L~r~~~rL~~~~~~~~~~~lgga-~Gt~~~~~----~~~~~~~a~~LG~~ 202 (387)
T cd01360 128 HKDTVMVGRTHGIHAEPTTFGLKFALWYAEFKRHLERLKEARERILVGKISGA-VGTYANLG----PEVEERVAEKLGLK 202 (387)
T ss_pred hCCCeeehhhcCCcceeehHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccchH-hhcCccCC----HHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999985 68876654 34678999999999
Q ss_pred CcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCC--CCCCCCCCCCCCChhHHHHHHH
Q psy7883 262 FKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPTQVEALTM 339 (607)
Q Consensus 262 ~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~~~E~ir~ 339 (607)
.++..+ ++++||+++|+++++++++++|+|||+||++|++ +|||||.+|. +++|||||||||||+.+|++++
T Consensus 203 ~~~~~~---~~~~rD~~~e~~~~la~~~~~L~ria~Dl~~~s~---~e~gel~e~~~~~~~GSS~MPqKrNP~~~E~i~~ 276 (387)
T cd01360 203 PEPIST---QVIQRDRHAEYLSTLALIASTLEKIATEIRHLQR---TEVLEVEEPFSKGQKGSSAMPHKRNPILSENICG 276 (387)
T ss_pred CCCCCC---cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccccceecCCCCCCCCcCCCCCCCCCHHHHHHHH
Confidence 744332 6799999999999999999999999999999996 6999999883 5799999999999999999999
Q ss_pred HHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhh--hHhHHHhh-
Q psy7883 340 VAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVND--SLMLVTAL- 416 (607)
Q Consensus 340 ~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~--~~~lat~L- 416 (607)
+++.+.|...++ +.+.+.+++++...+...|..++.+......++..+..++++|+||+++|++++.. .+.+++++
T Consensus 277 ~a~~~~g~~~~~-~~~~~~~~~rd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~ae~la 355 (387)
T cd01360 277 LARVIRSNVIPA-LENVALWHERDISHSSVERVILPDATILLDYILRRMTRVLENLVVYPENMRRNLNLTKGLIFSQRVL 355 (387)
T ss_pred HHHHHHHHHHHH-HhhhHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccCHHHHHHHH
Confidence 999999988644 44455566777655544577888888888888899999999999999999999986 45555544
Q ss_pred ---CC-CCCHHHHHHHHHH
Q psy7883 417 ---NP-HIGYDKAAEIAKH 431 (607)
Q Consensus 417 ---a~-~ig~~~Ah~ia~~ 431 (607)
+. ++||++||+++.+
T Consensus 356 ~~L~~~g~~~r~Ah~~V~~ 374 (387)
T cd01360 356 LALVEKGMSREEAYEIVQR 374 (387)
T ss_pred HHHHHcCCCHHHHHHHHHH
Confidence 34 6999999999887
No 34
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase (ASL)_like. This group contains ASL, prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. These proteins are members of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). pCMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone, in the beta-ketoadipate pathway. ASL deficiency has been linked t
Probab=100.00 E-value=1.7e-71 Score=598.38 Aligned_cols=359 Identities=25% Similarity=0.312 Sum_probs=312.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCccccccccCCCcccccchhHHHHHHHHHHh
Q psy7883 44 MPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEML 122 (607)
Q Consensus 44 ~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~l 122 (607)
++++++++|++||.||+++|.+.| ||++++++|.++|+.+. .+. +.-+... ...++++ ++ ++..|++++
T Consensus 6 s~~~~~~~~l~ve~A~a~~l~~~giip~~~a~~i~~~l~~~~-~d~-~~~~~~~---~~~~~~v-~~----~e~~L~~~~ 75 (381)
T cd01595 6 SEENKLRTWLDVEAALAEAQAELGLIPKEAAEEIRAAADVFE-IDA-ERIAEIE---KETGHDV-IA----FVYALAEKC 75 (381)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhhccc-CCH-HHHHHHH---HHhCcCc-HH----HHHHHHHHh
Confidence 899999999999999999999999 99999999999998752 121 1000111 1134553 34 788899999
Q ss_pred ccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchh
Q psy7883 123 GGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLG 202 (607)
Q Consensus 123 G~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG 202 (607)
|++.|+ |||+|+|||||++|+++|++|+.+. .+.+.|..++++|.++|++|+||+||||||+|||||||||
T Consensus 76 g~~~~~--------~vH~g~S~nDi~~Ta~~l~lr~~l~-~l~~~l~~l~~~L~~~A~~~~dt~m~grTH~Q~A~P~T~G 146 (381)
T cd01595 76 GEDAGE--------YVHFGATSQDINDTALALQLRDALD-IILPDLDALIDALAKLALEHKDTPMLGRTHGQHALPTTFG 146 (381)
T ss_pred hhHhhh--------HeecCcCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCChHHhhcCCCCCcchhHH
Confidence 854665 4557999999999999999999876 6999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHHHHHhCCCCcCCCCchhh-hhchhHHHHH
Q psy7883 203 QEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEA-LASHDALVEV 281 (607)
Q Consensus 203 ~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~la~~LGl~~~~~~ns~da-~~sRD~~~e~ 281 (607)
||+++|+++|.||++||.+++++++.+||||+ +||+.+.++ ++..+++++|++|||..+ .++| +++||+++|+
T Consensus 147 ~~~~~~~~~L~r~~~rL~~~~~~~~~~~lGga-~G~g~~~~~-~~~~~~~~~a~~LGl~~~----~~~~~~~~rd~~~e~ 220 (381)
T cd01595 147 KKFAVWAAELLRHLERLEEARERVLVGGISGA-VGTHASLGP-KGPEVEERVAEKLGLKVP----PITTQIEPRDRIAEL 220 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhcccH-hhhHhhcCC-cHHHHHHHHHHHcCCCCC----CCCCCcccchHHHHH
Confidence 99999999999999999999999999999995 588766643 678889999999999642 3445 4499999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCC--CCCCCCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccc
Q psy7883 282 SGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGH 359 (607)
Q Consensus 282 ~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~ 359 (607)
++++++++++|+|||+||++|+| +|||||.+|. +++|||||||||||+.+|.++++++++.|+..+++... .++
T Consensus 221 ~~~l~~~~~~l~ria~Dl~~~~s---~e~gev~~~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~-~~~ 296 (381)
T cd01595 221 LSALALIAGTLEKIATDIRLLQR---TEIGEVEEPFEKGQVGSSTMPHKRNPIDSENIEGLARLVRALAAPALENL-VQW 296 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh---ccccceeccccCCCCCCccCCCcCCcHHHHHHHHHHHHHHHHHHHHHHhh-hHh
Confidence 99999999999999999999997 6999999996 38999999999999999999999999999998887655 788
Q ss_pred cccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHh------HHHhhCC-CCCHHHHHHHHHH
Q psy7883 360 FELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLM------LVTALNP-HIGYDKAAEIAKH 431 (607)
Q Consensus 360 ~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~------lat~La~-~ig~~~Ah~ia~~ 431 (607)
++++.+.+.+.|..++++..+..+++.++..++++|+||+++|++++..+++ +++.|++ ++||++||+++++
T Consensus 297 ~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~g~~~ae~~~~~L~~~g~g~~~Ah~~v~~ 375 (381)
T cd01595 297 HERDLSDSSVERNILPDAFLLLDAALSRLQGLLEGLVVNPERMRRNLDLTWGLILSEAVMMALAKKGLGRQEAYELVKE 375 (381)
T ss_pred hccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccCHHHHHHHHHHHHHhCCCHhHHHHHHHH
Confidence 9999888877889999999999999999999999999999999999998663 2345656 4999999999886
No 35
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=100.00 E-value=1.4e-70 Score=623.54 Aligned_cols=420 Identities=20% Similarity=0.264 Sum_probs=351.6
Q ss_pred ChHHHHHHHHHHH-----HHHHHHHHHcC-CCHHHHHHHHHHHHHHHcC-ccccCCccccccccCCCcccccchhHHHHH
Q psy7883 44 MPEAIISAMGILK-----KAAAQVNKGFG-LDSKIADTISKAADEVISG-KLYEDHFPLSIWQTGSGTQTNMNVNEVISN 116 (607)
Q Consensus 44 ~~~~~i~a~l~ve-----~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~-~~~~~~~~~~~~~~~~~~di~~~vnevIe~ 116 (607)
++...++.++.++ .||++||.+.| ||++++++|.++|.++... .. +..+.. ....+| +|++||+
T Consensus 20 ~~~~~~~~~l~~e~i~~~~A~a~~l~~~Giip~~~a~~I~~~l~~~~~~~~~-~~~~~~----~~~~ed----~h~~ie~ 90 (614)
T PRK12308 20 NDSLRFDYRLAEQDIVGSIAWSKALLSVGVLSEEEQQKLELALNELKLEVME-DPEQIL----LSDAED----IHSWVEQ 90 (614)
T ss_pred hcCHHHHHHHHHHHHHHhHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCC----CCcccc----HHHHHHH
Confidence 4567789999999 99999999999 9999999999999876321 01 101111 123455 4556999
Q ss_pred HHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccC
Q psy7883 117 RAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDA 196 (607)
Q Consensus 117 ~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~A 196 (607)
.|++.+| +.|++ ||+|+||||+++|+++|++|+.+. .+.+.|..|+++|.++|++|++|+||||||+|||
T Consensus 91 ~L~~~~g-~~~~~--------iH~g~S~nD~~~Ta~~L~~r~~~~-~l~~~l~~l~~~l~~~a~~~~~t~m~grTH~Q~A 160 (614)
T PRK12308 91 QLIGKVG-DLGKK--------LHTGRSRNDQVATDLKLWCRQQGQ-QLLLALDQLQQQMVNVAERHQGTVLPGYTHLQRA 160 (614)
T ss_pred HHHHHhc-ccccc--------eecCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCEeecCcCCccc
Confidence 9999998 56664 456999999999999999999875 5999999999999999999999999999999999
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccc-cCCCCCCcchhHHHHHHHHHHhCCCCcCCCCchhhhhch
Q psy7883 197 TPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASH 275 (607)
Q Consensus 197 qPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAv-GT~~~~d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sR 275 (607)
||||||||+++|+++|.||++||.+++++++.+|||||++ ||+++.++ +++|+.|||.. +..|++||+++|
T Consensus 161 ~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGgga~agt~~~~~r-------~~~a~~LG~~~-~~~n~~da~~~r 232 (614)
T PRK12308 161 QPVTFAHWCLAYVEMFERDYSRLEDALTRLDTCPLGSGALAGTAYPIDR-------EALAHNLGFRR-ATRNSLDSVSDR 232 (614)
T ss_pred EEecHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhccccCCCCCCCH-------HHHHHHhCCCC-CcCCHHHHHcCc
Confidence 9999999999999999999999999999999999999997 88877765 58999999996 678999999999
Q ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhcchHHHHh-
Q psy7883 276 DALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTV- 353 (607)
Q Consensus 276 D~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~- 353 (607)
|+++++++++++++++|+|||+||++|+| +|||++++++. ++|||||||||||+.+|+++++++++.|++.+++.
T Consensus 233 d~~~e~~~~l~~~~~~l~ria~Dl~~~ss---~e~g~~el~~~~~~gSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~~ 309 (614)
T PRK12308 233 DHVMELMSVASISMLHLSRLAEDLIFYNS---GESGFIELADTVTSGSSLMPQKKNPDALELIRGKTGRVYGALAGMMMT 309 (614)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCcCCEEeCccCCCccccCcCccCCcHHHHHHHHHHHHhhHHHHHHHH
Confidence 99999999999999999999999999997 58998888875 79999999999999999999999999999988873
Q ss_pred -cccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhHHHhhC----C-CCCHHHHHH
Q psy7883 354 -GGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALN----P-HIGYDKAAE 427 (607)
Q Consensus 354 -~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~lat~La----~-~ig~~~Ah~ 427 (607)
.+.+.+++++.+.+ +..++.+..+...++.++..++++|+||++||++|+..++.++++++ . ++||++||+
T Consensus 310 ~~~~~~~~~rd~~~~---~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~g~~~a~~la~~L~~~g~~~r~Ah~ 386 (614)
T PRK12308 310 VKALPLAYNKDMQED---KEGLFDALDTWNDCMEMAALCFDGIKVNGERTLEAAKQGYANATELADYLVAKGIPFREAHH 386 (614)
T ss_pred HcCCchhhccchhhh---HHHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHHHcCHHHHHHHHHHHHHcCCCHHHHHH
Confidence 45555677665433 33444444444556678899999999999999999988888877654 3 699999999
Q ss_pred HHHH----HHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCcccCCCccccccchHHHHHHHhhhccCCCCCCCC
Q psy7883 428 IAKH----AYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVISQQILAAKVLPPWSRP 503 (607)
Q Consensus 428 ia~~----A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~ 503 (607)
++.+ +.++|+++.+ +..++++.+ ...+.+++.. +.+++.+++.+...||++|..+..
T Consensus 387 ~v~~~v~~a~~~g~~l~~-------~~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~~~~~~G~~~~~~v~~ 447 (614)
T PRK12308 387 IVGVAVVGAIAKGCALEE-------LSLEQLKEF-----------SDVIEDDVYQ-ILTIESCLEKRCALGGVSPEQVAY 447 (614)
T ss_pred HHHHHHHHHHHcCCChhh-------CCHHHHHHh-----------hhhhhHHHHH-hCCHHHHHHhccCCCCCCHHHHHH
Confidence 8764 6678888887 555665553 2234566776 788999999999999999999988
Q ss_pred CchhhhhccccC
Q psy7883 504 SCPQARSIIRGR 515 (607)
Q Consensus 504 ~~~~~~~~~~~~ 515 (607)
...+++.-+..+
T Consensus 448 ~~~~~~~~l~~~ 459 (614)
T PRK12308 448 AVEQADKRLAAR 459 (614)
T ss_pred HHHHHHHHhcCC
Confidence 888887765544
No 36
>PRK02186 argininosuccinate lyase; Provisional
Probab=100.00 E-value=4e-70 Score=642.89 Aligned_cols=431 Identities=17% Similarity=0.190 Sum_probs=352.8
Q ss_pred CCCc-hHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCccccccc
Q psy7883 22 KYYG-AQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQ 99 (607)
Q Consensus 22 ~~yg-~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~~ 99 (607)
.+++ .+++++++.=+... ..+++++++|++++.||++||+++| ||++++++|.++|.++.+... ..+..+
T Consensus 413 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~Ah~~~l~~~gii~~~~a~~I~~~l~~~~~~~~--~~~~~~--- 484 (887)
T PRK02186 413 ARPGLPPEAQAIVYGPGAS---EAPLAELDHLAAIDEAHLVMLGDTGIVAPERARPLLDAHRRLRDAGF--APLLAR--- 484 (887)
T ss_pred cccCCChhhhceecCCCcc---hhhhhhhHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHhHH--hhCcCC---
Confidence 4554 67788888322222 2578999999999999999999999 999999999999977643211 122222
Q ss_pred cCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 100 TGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKS 179 (607)
Q Consensus 100 ~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA 179 (607)
...+++|++ +|++|++++|++.|++ +|+|||||||++|+++|++|+.+. .|.+.|..|+++|+++|
T Consensus 485 -~~~~~~~~~----~e~~L~~~~g~~~~~~--------lH~grSrnD~v~T~~~l~lr~~~~-~l~~~l~~l~~~L~~~A 550 (887)
T PRK02186 485 -PAPRGLYML----YEAYLIERLGEDVGGV--------LQTARSRNDINATTTKLHLREATS-RAFDALWRLRRALVFKA 550 (887)
T ss_pred -CCCcchHHH----HHHHHHHHhChhhhcc--------cCccccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 234667777 8999999999666765 346999999999999999999976 59999999999999999
Q ss_pred HHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccc-cCCCCCCcchhHHHHHHHHHHh
Q psy7883 180 QEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRISELT 258 (607)
Q Consensus 180 ~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAv-GT~~~~d~~~~~~v~~~la~~L 258 (607)
++|+||+||||||+|||||||||||+++|+++|.||++||.+++++++.+||||||. ||++++++ +++|++|
T Consensus 551 ~~~~~~~m~g~TH~Q~A~P~T~G~~~~~~~~~l~r~~~rl~~~~~r~~~~plG~aag~gt~~~~~~-------~~~a~~L 623 (887)
T PRK02186 551 SANVDCALPIYSQYQPALPGSLGHYLLAVDGALARETHALFALFEHIDVCPLGAGAGGGTTFPIDP-------EFVARLL 623 (887)
T ss_pred HHcCCCEeecCccCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCcccccccCCCCCCCH-------HHHHHHc
Confidence 999999999999999999999999999999999999999999999999999999884 88888776 5789999
Q ss_pred CCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCC-CCCCCCCCCCCChhHHHHH
Q psy7883 259 GLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQVEAL 337 (607)
Q Consensus 259 Gl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~~E~i 337 (607)
||+. +..|++||+++||+++|+++++++++++|+|||+||++|+| +|||||.+|+. ++|||||||||||+.+|++
T Consensus 624 Gf~~-~~~n~~da~~~rd~~~e~~~~l~~~~~~l~ria~Dl~~~~~---~e~g~i~~~~~~~~gSSiMPqKrNP~~~E~i 699 (887)
T PRK02186 624 GFEQ-PAPNSLDAVASRDGVLHFLSAMAAISTVLSRLAQDLQLWTT---REFALVSLPDALTGGSSMLPQKKNPFLLEFV 699 (887)
T ss_pred CCCC-CccCHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCcEECCCccccccCCCCCCCCCcHHHHH
Confidence 9995 78899999999999999999999999999999999999997 69999999985 7999999999999999999
Q ss_pred HHHHHHhhcchHHHHhcccccccccccchhhHHH-hHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhHHHhh
Q psy7883 338 TMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVS-NVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTAL 416 (607)
Q Consensus 338 r~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~-~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~lat~L 416 (607)
|++++++.|++.+++....+.+++++.......+ .+++.+..+. .++.++..++++|+||++||++++..+++++|+|
T Consensus 700 r~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~l~~~~~~l~~l~v~~~rm~~~~~~~~~~at~l 778 (887)
T PRK02186 700 KGRAGVVAGALASASAALGKTPFSNSFEAGSPMNGPIAQACAAIE-DAAAVLVLLIDGLEADQARMRAHLEDGGVSATAV 778 (887)
T ss_pred HHHHHHHhhHHHHHHHHHccCCcccccchhhhhHHHHHHHHHHHH-HHHHHHHHHHhhCEECHHHHHHHHhcCcchHHHH
Confidence 9999999999988876555556664432211123 3445555554 5556777999999999999999999998888766
Q ss_pred C----C--CCCHHHHHHHHHH----HHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCcccCCCccccccchHHH
Q psy7883 417 N----P--HIGYDKAAEIAKH----AYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKV 486 (607)
Q Consensus 417 a----~--~ig~~~Ah~ia~~----A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~~~~~~~~~v~~~~~~~~~~ 486 (607)
+ . ++||++||+++.+ +.++|.++.+.+.+ +... +..++ .+.+
T Consensus 779 a~~L~~~~g~~fr~Ah~~v~~~v~~~~~~~~~~~~~~~~--------~~~~--------------~~~~~------~~~~ 830 (887)
T PRK02186 779 AESLVVRRSISFRSAHTQVGQAIRQSLDQGRSSADALAA--------LDPQ--------------FVSRA------PLEW 830 (887)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHhcCCcccchHHH--------hhhh--------------hccch------HHHH
Confidence 4 3 6999999999765 45566555543322 1110 12222 4568
Q ss_pred HHHHhhhccCCCCCCCCCchhhhhcccc
Q psy7883 487 ISQQILAAKVLPPWSRPSCPQARSIIRG 514 (607)
Q Consensus 487 v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (607)
++.+...||+.|..++.++.++++-.+.
T Consensus 831 ~~~r~~~gg~~~~~v~~~~~~~~~~l~~ 858 (887)
T PRK02186 831 ARSHRFGGGPGAADLNAGLARACAALRD 858 (887)
T ss_pred HHHhhCCCCCCHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999988875544
No 37
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase. Members of this family are 3-carboxy-cis,cis-muconate cycloisomerase, the enzyme the catalyzes the second step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=1.9e-67 Score=557.93 Aligned_cols=335 Identities=23% Similarity=0.254 Sum_probs=290.4
Q ss_pred CCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCccccccc
Q psy7883 21 DKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQ 99 (607)
Q Consensus 21 ~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~~ 99 (607)
+.+||+++|+++| ++++++++|++||+||++||.++| ||++++++|.++|+++.. +. .+
T Consensus 3 ~~~~~~~~~~~i~----------sd~~~i~~~~~ve~A~a~al~~~Gii~~~~a~~I~~a~~~~~~-d~---------~~ 62 (338)
T TIGR02426 3 DGLFGDPAALELF----------SDRAFLRAMLDFEAALARAQADAGLIPAEAAAAIEAACAAAAP-DL---------EA 62 (338)
T ss_pred ccccCCHHHHHHc----------CCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhccCCC-CH---------HH
Confidence 5699999999999 899999999999999999999999 999999999999976521 11 11
Q ss_pred cCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 100 TGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKS 179 (607)
Q Consensus 100 ~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA 179 (607)
.+.++..+.+....++..+.+.+|++.|+ |||+||||||+++|+++|++|+.+. .+.+.|.+++++|.++|
T Consensus 63 ~~~~~~~~~~~~~~~~~~l~~~~g~~~g~--------~vH~G~S~nD~~~Ta~~L~lr~~l~-~l~~~l~~l~~~L~~~A 133 (338)
T TIGR02426 63 LAHAAATAGNPVIPLVKALRKAVAGEAAR--------YVHRGATSQDVIDTSLMLQLRDALD-LLLADLGRLADALADLA 133 (338)
T ss_pred HHhHHHhcCCcHHHHHHHHHHHhCccccC--------cccCCCChhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 11111111222222567788999866665 3556999999999999999999875 69999999999999999
Q ss_pred HHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHHHHHhC
Q psy7883 180 QEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTG 259 (607)
Q Consensus 180 ~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~la~~LG 259 (607)
++|+|++||||||+||||||||||||++|+++|.||++||.+++++++.+||||+ +||+.+. +.++..++++++++||
T Consensus 134 ~~~~~~~m~grTH~Q~A~P~T~G~~l~~~~~~l~r~~~rL~~~~~~~~~~~lGga-vGtg~~~-~~~~~~v~~~~a~~LG 211 (338)
T TIGR02426 134 ARHRDTPMTGRTLLQQAVPTTFGLKAAGWLAAVLRARDRLAALRTRALPLQFGGA-AGTLAAL-GTRGGAVAAALAARLG 211 (338)
T ss_pred HHhCCCceecccCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcch-hccCCCc-cchHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999994 6987655 4677788999999999
Q ss_pred CCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCCCCCCCCChhHHHHHHH
Q psy7883 260 LPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIMPGKVNPTQVEALTM 339 (607)
Q Consensus 260 l~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSSiMPqKrNP~~~E~ir~ 339 (607)
|+.+ ..+ |+++||+++|+++++++++++|+|||+||++|++ +||||+.++ .++|||||||||||+.+|++++
T Consensus 212 l~~~-~~~---~~~~rd~~~e~~~~l~~la~~l~ria~Dl~l~s~---~e~gei~~~-~~~GSSiMPqK~NP~~~E~i~~ 283 (338)
T TIGR02426 212 LPLP-ALP---WHTQRDRIAEFGSALALVAGALGKIAGDIALLSQ---TEVGEVFEA-GGGGSSAMPHKRNPVGAALLAA 283 (338)
T ss_pred cCCC-CCc---chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCChhhhC-CCCCcccCCCCCCcHHHHHHHH
Confidence 9974 333 6899999999999999999999999999999995 699999884 3799999999999999999999
Q ss_pred HHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhcc
Q psy7883 340 VAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGI 395 (607)
Q Consensus 340 ~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL 395 (607)
+|+++.|+..+++.. ...++|++...+..+|.++|+++.++++++..+..++++|
T Consensus 284 ~a~~~~g~~~~~~~~-~~~~~Er~~~~~~~e~~~lp~~~~~~~~~l~~~~~~l~~l 338 (338)
T TIGR02426 284 AARRVPGLAATLHAA-LPQEHERSLGGWHAEWETLPELVRLTGGALRQAQVLAEGL 338 (338)
T ss_pred HHHHHHHHHHHHHHh-chHhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999998777544 6678888877777789999999999999999999998875
No 38
>PRK06389 argininosuccinate lyase; Provisional
Probab=100.00 E-value=9.6e-67 Score=562.29 Aligned_cols=353 Identities=16% Similarity=0.128 Sum_probs=301.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCccccccccCCCcccccchhHHHHHHHHHHh
Q psy7883 44 MPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEML 122 (607)
Q Consensus 44 ~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~l 122 (607)
.|...+...+.+.+||+.||.+.| ||++++++|.++|.++.+++ |+++ ...||+|++ ||++|++++
T Consensus 27 ~D~~l~~~di~~~~AH~~mL~~~gii~~~e~~~i~~~L~~i~~~~-----~~~~----~~~EDvh~~----iE~~L~~~~ 93 (434)
T PRK06389 27 ADKNLIKYEIINLLAYHVALAQRRLITEKAPKCVINALIDIYKNG-----IEID----LDLEDVHTA----IENFVIRRC 93 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCC-----CcCC----CCCCchHHH----HHHHHHHHh
Confidence 578889999999999999999999 99999999999999987643 3433 256898888 999999999
Q ss_pred ccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchh
Q psy7883 123 GGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLG 202 (607)
Q Consensus 123 G~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG 202 (607)
| +.|+++ |+ |||||||+.|++|||+|+++.+ +...|..++++|+++ |.|++||||||+|+|||+|||
T Consensus 94 G-~~gg~l--ht------gRSRNDqvat~~RL~~r~~~~~-~~~~l~~l~~~l~~~---~~dtimpGyTHlQ~AqP~TfG 160 (434)
T PRK06389 94 G-DMFKNF--RL------FLSRNEQVHADLNLFIIDKIIE-IEKILYEIIKVIPGF---NLKGRLPGYTHFRQAMPMTVN 160 (434)
T ss_pred c-hhhhhh--cc------cCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH---ccCceeccccccCcCcchhHH
Confidence 9 688874 65 9999999999999999999886 999999999999964 999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHHhcCCcccc-ccCCCCCCcchhHHHHHHHHHHhCCCCcCCCCchhhhhchhH-HHH
Q psy7883 203 QEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTA-VGTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDA-LVE 280 (607)
Q Consensus 203 ~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaA-vGT~~~~d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~-~~e 280 (607)
||+++|+++|.||++||.+++++++.+|||+|+ +||++++++ +++|++|||+. +..|+++++.++|+ +++
T Consensus 161 ~~l~a~a~~L~rd~~RL~~~~~r~~~~pLGaga~~Gt~~~idr-------~~~A~lLGf~~-~~~n~~~a~~~~~~~~~e 232 (434)
T PRK06389 161 TYINYIKSILYHHINNLDSFLMDLREMPYGYGSGYGSPSSVKF-------NQMSELLGMEK-NIKNPVYSSSLYIKTIEN 232 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCCchhhH-------HHHHHHhCCCC-CCCCCchhhhccchHHHH
Confidence 999999999999999999999999999998666 499888865 68999999997 67888887677655 889
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhcchHHHHh--cccc
Q psy7883 281 VSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTV--GGSN 357 (607)
Q Consensus 281 ~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~--~~~~ 357 (607)
+++++++++++|+|||+||++|+| . |++++|+. ++|||||||||||+.+|.++++|+++.|.+.++.. .+.+
T Consensus 233 ~~~~la~la~~LsRiA~Dl~l~ss---~--g~ielpd~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~n~~ 307 (434)
T PRK06389 233 ISYLISSLAVDLSRICQDIIIYYE---N--GIITIPDEFTTGSSLMPNKRNPDYLELFQGIAAESISVLSFIAQSELNKT 307 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC---C--CEEEecCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 999999999999999999999997 2 77889976 89999999999999999999999999999988864 3344
Q ss_pred cccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhHHHhhC-----CCCCHHHHHHHHHHH
Q psy7883 358 GHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALN-----PHIGYDKAAEIAKHA 432 (607)
Q Consensus 358 ~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~lat~La-----~~ig~~~Ah~ia~~A 432 (607)
..|.++.+.. ...+++.+..+.+++ .++..++++++||+++ ++.+. +..++|++| .+++||+||++|+.+
T Consensus 308 ~~y~~D~q~~--~~~~~~~~~~~~~~l-~l~~~~i~~l~~~~~~-~~a~~-~~~~ATdlA~~lv~~GipFR~AH~~Vg~~ 382 (434)
T PRK06389 308 TGYHRDFQIV--KDSTISFINNFERIL-LGLPDLLYNIKFEITN-EKNIK-NSVYATYNAWLAFKNGMDWKSAYAYIGNK 382 (434)
T ss_pred chhhHHHHHH--HHHHHHHHHHHHHHH-HHHHHHHHhCeECHHH-Hhhcc-CCCcHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 3444443222 345677777776554 5667999999999999 55554 445588765 479999999999999
Q ss_pred HHcCCCHH
Q psy7883 433 YKTGITLK 440 (607)
Q Consensus 433 ~~~g~~l~ 440 (607)
++++.-+.
T Consensus 383 V~~~~~~~ 390 (434)
T PRK06389 383 IREGEVLD 390 (434)
T ss_pred HHhccchh
Confidence 88877643
No 39
>PRK09285 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1.1e-66 Score=570.11 Aligned_cols=412 Identities=17% Similarity=0.160 Sum_probs=325.9
Q ss_pred ccCCCCCCch--HhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C---CHHHHHH---HHHHHHHHHcCc
Q psy7883 17 EVPNDKYYGA--QTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-L---DSKIADT---ISKAADEVISGK 87 (607)
Q Consensus 17 ~~P~~~~yg~--~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I---p~e~a~~---I~~al~~i~~~~ 87 (607)
..|.+.+|+. .+|+.+| ++++++++|++||.|++++++++| + |+..++. |.+.+.++..+.
T Consensus 9 ~~p~~~ry~~~~~e~~~~~----------s~~~~~~~~l~vE~A~a~a~a~~g~~~~ip~~~~~~~~~i~~~~~~~~~~d 78 (456)
T PRK09285 9 LSPLDGRYASKTAALRPIF----------SEFGLIRYRVQVEVEWLIALAAHPGIPEVPPFSAEANAFLRAIVENFSEED 78 (456)
T ss_pred CCCCccccCCCCHHHHHHh----------CHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCccc
Confidence 5789999999 8999999 789999999999999999999997 4 5555555 777663321111
Q ss_pred cccCCccccccccCCCcccccchhHHHHHHHHHHhcc-----CCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHH
Q psy7883 88 LYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGG-----KLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHN 162 (607)
Q Consensus 88 ~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~-----~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~ 162 (607)
+ . .+.......+.|+ + .++..+.+.+|. +.|+ |||+|+|||||+||+++|++|+.+ .
T Consensus 79 ~-~---~i~~~e~~~~hdv-~----a~~~~l~~~~~~~~~~~~~~~--------~vH~G~Ts~Di~dTa~~L~lr~~l-~ 140 (456)
T PRK09285 79 A-A---RIKEIERTTNHDV-K----AVEYFLKEKLAGLPELEAVSE--------FIHFACTSEDINNLSHALMLKEAR-E 140 (456)
T ss_pred H-H---HHHHHHHHhCCCh-H----HHHHHHHHHhcccCcchhHHh--------HccCCCChhhHHHHHHHHHHHHHH-H
Confidence 1 0 0000001112221 2 267778888873 2333 566799999999999999999986 4
Q ss_pred H-HHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCC-C
Q psy7883 163 R-LLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTG-L 240 (607)
Q Consensus 163 ~-L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~-~ 240 (607)
. |.+.|..++++|.++|++|+||+|+||||+||||||||||||++|+++|.|+++||.++ ...+++|| |+||. .
T Consensus 141 ~~l~~~L~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~---~~~g~~~G-AvGt~~a 216 (456)
T PRK09285 141 EVLLPALRELIDALKELAHEYADVPMLSRTHGQPATPTTLGKEMANVAYRLERQLKQLEAV---EILGKING-AVGNYNA 216 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeeceecCCCCeeehHHHHHHHHHHHHHHHHHHHHHH---HHhhhccc-ccccHHH
Confidence 5 99999999999999999999999999999999999999999999999999999999999 45677777 57883 2
Q ss_pred CC---CcchhHHHHHHHHHHhCCCCcCCCCchhh-hhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcC
Q psy7883 241 NT---YVGFAENCTQRISELTGLPFKSAPNKFEA-LASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLP 316 (607)
Q Consensus 241 ~~---d~~~~~~v~~~la~~LGl~~~~~~ns~da-~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp 316 (607)
+. +...+.++.+.++++|||..+ +++| +++||++++++++++.++++|+|||+||++|++ ..|++|. .+
T Consensus 217 ~~~~~~~~~~~~v~~~~~~~LGL~~~----~~~~~v~~rD~~~e~~~~la~~a~~L~kia~Di~ll~~--~~e~~e~-~~ 289 (456)
T PRK09285 217 HLAAYPEVDWHAFSREFVESLGLTWN----PYTTQIEPHDYIAELFDAVARFNTILIDLDRDVWGYIS--LGYFKQK-TK 289 (456)
T ss_pred HhhhcCCccHHHHHHHHHHHhCCCCC----CCccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--chhhhcc-CC
Confidence 21 111135678888899999853 3445 699999999999999999999999999999996 2455552 24
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccc
Q psy7883 317 ENEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGIL 396 (607)
Q Consensus 317 ~~~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~ 396 (607)
.+++|||+|||||||+.+|+++++++.+.+....++......++|++...+...|.+ +.+..+...++..+..++++|+
T Consensus 290 ~~~~GSS~MPhKrNPv~~E~i~~~a~~~~~~~~~~~~~~~~~~~eRD~~~~~~e~~~-~~~~~~~~~~l~~~~~~l~~L~ 368 (456)
T PRK09285 290 AGEIGSSTMPHKVNPIDFENSEGNLGLANALLEHLAAKLPISRWQRDLTDSTVLRNL-GVAFGYSLIAYDSLLKGLGKLE 368 (456)
T ss_pred CCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHHHHhhccHHhhCCcCchhhhhcch-HHHHHHHHHHHHHHHHHHccCE
Confidence 569999999999999999999999999998776655443245678777666556777 8888888888899999999999
Q ss_pred cCHHHHHHhhhhhHhHHH-----hhCCCCCHHHHHHHHHH----HHHcCCCHHHH---HHHcCCCCHHHHhhhcCccccc
Q psy7883 397 PNEDTIAKHVNDSLMLVT-----ALNPHIGYDKAAEIAKH----AYKTGITLKEA---AVKLGYLTEQEYDQWVKPEKML 464 (607)
Q Consensus 397 Vn~erm~~~l~~~~~lat-----~La~~ig~~~Ah~ia~~----A~~~g~~l~e~---l~~~~~Ls~eel~~lldP~~~v 464 (607)
||++||++|+..++++++ .|++ +|+++||+++++ +.++|.+|.|+ +.++..++ ++| .+|||.+|+
T Consensus 369 V~~~rm~~nl~~~~~~~sE~~~~~l~~-~gr~~A~~~v~~~~~~~~~~~~~~~e~~~~l~~~~~~~-~~l-~~~~p~~yl 445 (456)
T PRK09285 369 VNEARLAEDLDANWEVLAEPIQTVMRR-YGIENPYEKLKELTRGKRITAEALREFIDGLDLPEEAK-ARL-KALTPANYI 445 (456)
T ss_pred ECHHHHHHHHHhcCcchHHHHHHHHHH-hChHhHHHHHHHHHHHHHhccCCHHHHHHHhcCCHhHH-HHH-HcCCHHHHH
Confidence 999999999988777543 4566 999999998764 46789999998 65544344 789 999999999
Q ss_pred CCCCCcc
Q psy7883 465 GPEYHPY 471 (607)
Q Consensus 465 g~~~~~~ 471 (607)
|.+..++
T Consensus 446 g~a~~~~ 452 (456)
T PRK09285 446 GLAAELA 452 (456)
T ss_pred hhHHHHH
Confidence 9876654
No 40
>cd01334 Lyase_I Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions. The Lyase class I family contains class II fumarase, aspartase, adenylosuccinate lyase (ASL), argininosuccinate lyase (ASAL), prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. It belongs to the Lyase_I superfamily. Proteins of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits.
Probab=100.00 E-value=2.2e-65 Score=540.39 Aligned_cols=323 Identities=38% Similarity=0.517 Sum_probs=274.8
Q ss_pred HHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCC
Q psy7883 49 ISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLG 127 (607)
Q Consensus 49 i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g 127 (607)
+++|+++|+||++||.++| ||+++++.|.++|.++..... +.. ..+.+.+++.|++ +++.+.+++|++.+
T Consensus 1 ~~~~l~ve~A~a~al~~~Gli~~~~a~~I~~~l~~~~~~~~-~~~----~~~~~~~~~~~~~----~e~~l~~~~g~~~~ 71 (325)
T cd01334 1 IRADLQVEKAHAKALAELGLLPKEAAEAILAALDEILEGIA-ADQ----VEQEGSGTHDVMA----VEEVLAERAGELNG 71 (325)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhCcc-ccC----eeeCCCCccHHHH----HHHHHHHHhccccC
Confidence 4689999999999999999 999999999999988754211 111 1234467787777 67777788886545
Q ss_pred CCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHH
Q psy7883 128 SKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSG 207 (607)
Q Consensus 128 ~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~ 207 (607)
+ |||+|+||||+++|+++|++|+.+. .+.+.|.+++++|.++|++|+||+||||||+|||||||||||+++
T Consensus 72 ~--------~lH~G~S~nDi~~ta~~l~lr~~~~-~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~ 142 (325)
T cd01334 72 G--------YVHTGRSSNDIVDTALRLALRDALD-ILLPALKALIDALAAKAEEHKDTVMPGRTHLQDAQPTTLGHELAA 142 (325)
T ss_pred C--------CCccCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCcEeecccccccCccccHHHHHHH
Confidence 4 5667999999999999999999876 699999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHH
Q psy7883 208 YVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNT 287 (607)
Q Consensus 208 ~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~ 287 (607)
|+++|.|+++||.+++++++.+|||+||+||+...+ ..+++++|++|||.. +..|+++++++||+++|++++++.
T Consensus 143 ~~~~l~r~~~rL~~~~~~~~~~~lG~gA~g~~~~~~----~~~~~~~a~~LG~~~-~~~~~~~a~~~rd~~~e~~~~l~~ 217 (325)
T cd01334 143 WAAELERDLERLEEALKRLNVLPLGGGAVGTGANAP----PIDRERVAELLGFFG-PAPNSTQAVSDRDFLVELLSALAL 217 (325)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCcHhHHhCcCCCC----cchHHHHHHHhcCcC-cCcCHHHHHhCcHHHHHHHHHHHH
Confidence 999999999999999999999999977887654432 234589999999964 678999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCCCceeeEEcCCC-CCCCCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccch
Q psy7883 288 VAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFK 366 (607)
Q Consensus 288 la~~LsRiA~Dl~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~ 366 (607)
++++|+|||+|+++|++ +|||||.+|+. ++|||+|||||||+.+|+++++++++.|...+++....+.+++.+...
T Consensus 218 ~~~~l~ria~Dl~~~~~---~e~gev~~~~~~~~gSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~~~~ 294 (325)
T cd01334 218 LAVSLSKIANDLRLLSS---GEFGEVELPDAKQPGSSIMPQKVNPVILELVRGLAGRVIGNLAALLEALKGGPLEDNVDS 294 (325)
T ss_pred HHHHHHHHHHHHHHHcC---CCCCeEECCCCCCCCcccCCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHhcCchhhhccc
Confidence 99999999999999997 59999999986 899999999999999999999999999999888876666555433222
Q ss_pred hhHHHhHHHHHHHHHHHHHHHHHHhhhccccC
Q psy7883 367 PLIVSNVLRSIRLLADTTESFTTKCVTGILPN 398 (607)
Q Consensus 367 ~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn 398 (607)
. ..+..++.+......++..+..++++|+||
T Consensus 295 ~-~~~~~l~~~~~~~~~~l~~~~~~~~~l~v~ 325 (325)
T cd01334 295 P-VEREALPDSFDLLDAALRLLTGVLEGLEVN 325 (325)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHhCcCEeC
Confidence 2 235566666666666777888999999987
No 41
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=7.4e-65 Score=539.93 Aligned_cols=336 Identities=21% Similarity=0.257 Sum_probs=287.9
Q ss_pred CCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCcccccc
Q psy7883 20 NDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIW 98 (607)
Q Consensus 20 ~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~ 98 (607)
++.+|+.++|+.+| ++++++++|++||+|+|++|.++| ||++++++|.++|+++.. +. ..+.
T Consensus 11 ~~~~~~~~~~~~~~----------s~~~~i~a~l~vE~A~a~a~~~~G~Ip~~~a~~I~~a~~~~~~-d~--~~~~---- 73 (351)
T PRK05975 11 LSGLFGDDEIAALF----------SAEADIAAMLAFEAALAEAEAEHGIIPAEAAERIAAACETFEP-DL--AALR---- 73 (351)
T ss_pred hhccCCCHHHHHHc----------CcHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhccCCC-CH--HHHh----
Confidence 45699999999999 899999999999999999999999 999999999999976421 11 0000
Q ss_pred ccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 99 QTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKK 178 (607)
Q Consensus 99 ~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~l 178 (607)
.+..+ ..+++++++ ..+.+.+|++.|+ |||+|+||||++||+++|++|+.+ ..|.+.|..++++|.++
T Consensus 74 -~~~~~-~g~~v~~~v-~~l~~~~g~~~~~--------~vH~G~TsnDi~dTa~~L~lr~~l-~~l~~~L~~l~~~L~~l 141 (351)
T PRK05975 74 -HATAR-DGVVVPALV-RQLRAAVGEEAAA--------HVHFGATSQDVIDTSLMLRLKAAS-EILAARLGALIARLDAL 141 (351)
T ss_pred -hHHHh-cCCcHHHHH-HHHHHHhCchhhC--------cccCCCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 00000 013455544 5566777754443 677899999999999999999987 46999999999999999
Q ss_pred HHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHHHHHh
Q psy7883 179 SQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELT 258 (607)
Q Consensus 179 A~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~la~~L 258 (607)
|++|+||+|+||||+|||||||||||+++|+++|.|+++||.+++++++.+|||| |+||+.+. +++...+++++|++|
T Consensus 142 A~~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~~~~~~~~~lGG-AvGt~~~~-~~~~~~~~~~~a~~L 219 (351)
T PRK05975 142 EATFGQNALMGHTRMQAAIPITVADRLASWRAPLLRHRDRLEALRADVFPLQFGG-AAGTLEKL-GGKAAAVRARLAKRL 219 (351)
T ss_pred HHHhCCCeeecccCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc-HhccCccC-CCcHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999 57997664 455678999999999
Q ss_pred CCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCCCCCCCCChhHHHHHH
Q psy7883 259 GLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIMPGKVNPTQVEALT 338 (607)
Q Consensus 259 Gl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSSiMPqKrNP~~~E~ir 338 (607)
||..++ .|+++||+++++++++++++++|+|||+||++|+| +| ||+.+|. ++|||||||||||+.+|+++
T Consensus 220 Gl~~~~-----~~~~~rD~~~e~~~~la~la~~l~kiA~Di~ll~s---~e-gev~~~~-~~GSS~MPhKrNPv~~E~i~ 289 (351)
T PRK05975 220 GLEDAP-----QWHSQRDFIADFAHLLSLVTGSLGKFGQDIALMAQ---AG-DEISLSG-GGGSSAMPHKQNPVAAETLV 289 (351)
T ss_pred CcCCCc-----chhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CC-CcccCCC-CCccCCCCCCcCcHHHHHHH
Confidence 997532 37899999999999999999999999999999997 69 9999998 59999999999999999999
Q ss_pred HHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhcccc
Q psy7883 339 MVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILP 397 (607)
Q Consensus 339 ~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~V 397 (607)
++++.+.+....+. .....++|++...+..+|..+|+++.++++++..+..+++||++
T Consensus 290 ~~ar~~~~~~~~~~-~~~~~~~er~~~~~~~e~~~lp~~~~~~~~~l~~~~~ll~~l~~ 347 (351)
T PRK05975 290 TLARFNATQVSGLH-QALVHEQERSGAAWTLEWMILPQMVAATGAALRLALELAGNIRR 347 (351)
T ss_pred HHHHHHHHHHHHHH-hcccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHh
Confidence 99999998876554 34556778877666678999999999999999999999999875
No 42
>cd01598 PurB PurB_like adenylosuccinases (adenylsuccinate lyase, ASL). This subgroup contains EcASL, the product of the purB gene in Escherichia coli, and related proteins. It is a member of the Lyase class I family of the Lyase_I superfamily. Members of the Lyase class I family function as homotetramers to catalyze similar beta-elimination reactions in which a Calpha-N or Calpha-O bond is cleaved with the subsequent release of fumarate as one of the products. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two non-sequential steps in the de novo purine biosynthesis pathway: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=1.4e-63 Score=540.38 Aligned_cols=393 Identities=18% Similarity=0.185 Sum_probs=302.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHcC-CCH------HHHHHHHHHHHHHHcCccccCCccccccccCCCcccccchhHHHHH
Q psy7883 44 MPEAIISAMGILKKAAAQVNKGFG-LDS------KIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISN 116 (607)
Q Consensus 44 ~~~~~i~a~l~ve~A~A~al~e~G-Ip~------e~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~ 116 (607)
++++++++|++||.|++++|+++| ||+ ++++.|.+++......++ + .+.......+.| +. .++.
T Consensus 6 s~~~~~~~~l~vE~ala~a~a~~g~Ip~~~~~~~~aa~~i~~~~~~~~~~d~-~---~~~~~~~~~~hd----v~-al~~ 76 (425)
T cd01598 6 SEYALIKYRVQVEVEWLIALSNLEEIPEVPPLTKEELKFLRAIIENFSEEDA-L---RIKEIEATTNHD----VK-AVEY 76 (425)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHhhcCccCH-H---HHHHHHHHHCCC----cH-HHHH
Confidence 899999999999999999999999 999 999999988853210010 0 000001112333 22 2677
Q ss_pred HHHHHhccCCCC-CCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccc
Q psy7883 117 RAIEMLGGKLGS-KDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQD 195 (607)
Q Consensus 117 ~l~e~lG~~~g~-~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~ 195 (607)
.+.+.+|. .|+ . ..+.|||+|+|||||+||+++|++|+.+.+.+.+.|..++++|.++|++|+||+|+||||+||
T Consensus 77 ~l~~~~g~-~~~~~---~~~~~vH~G~TsnDi~dTa~~L~lr~~l~~~l~~~L~~l~~~L~~lA~~~~dt~m~GrTH~Q~ 152 (425)
T cd01598 77 FLKEKFET-LGLLK---KIKEFIHFACTSEDINNLAYALMIKEARNEVILPLLKEIIDSLKKLAKEYADVPMLSRTHGQP 152 (425)
T ss_pred HHHHHhcc-cccch---hhhhHhccCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeecccCCcc
Confidence 88888873 220 0 012366789999999999999999998766678999999999999999999999999999999
Q ss_pred CcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCC----cch-hHHHHHHHHHHhCCCCcCCCCchh
Q psy7883 196 ATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTY----VGF-AENCTQRISELTGLPFKSAPNKFE 270 (607)
Q Consensus 196 AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d----~~~-~~~v~~~la~~LGl~~~~~~ns~d 270 (607)
|||||||||+++|+++|.|+++||.++ ...++||| ++|| ++.. +++ +..+.+.+++.|||..++.++
T Consensus 153 A~P~TfG~~~a~w~~~L~r~~~RL~~~---~~~g~~gG-avGt-~~~~~~~~~~~~~~~~~~~~a~~LgL~~~~~~~--- 224 (425)
T cd01598 153 ATPTTLGKELAVFVYRLERQYKQLKQI---EILGKFNG-AVGN-FNAHLVAYPDVDWRKFSEFFVTSLGLTWNPYTT--- 224 (425)
T ss_pred CeehhHHHHHHHHHHHHHHHHHHHHHH---HHhheeeC-chhh-hhhhhhccCcccHHHHHHHHHHHhCcCCCCccc---
Confidence 999999999999999999999999998 35566877 5798 4332 222 367889999999998754442
Q ss_pred hhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEc--CCCCCCCCCCCCCCChhHHHHHHHHHHHhhcch
Q psy7883 271 ALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKL--PENEPGSSIMPGKVNPTQVEALTMVAAQVMGNH 348 (607)
Q Consensus 271 a~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~l--p~~~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~ 348 (607)
++++||+++|+++++++++++|+|||+||++|++ ++ |+.+ +.+++|||+|||||||+.+|+++++++.+.+..
T Consensus 225 ~v~~rD~~~e~~~~La~la~~L~kia~Di~ll~s---~g--e~~e~~~~~~~GSS~MPhKrNPv~~E~i~~~a~~a~~~~ 299 (425)
T cd01598 225 QIEPHDYIAELFDALARINTILIDLCRDIWGYIS---LG--YFKQKVKKGEVGSSTMPHKVNPIDFENAEGNLGLSNALL 299 (425)
T ss_pred chhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---Cc--ceeecCCCCCCCcCCCCCCcCchHHHHHHHHHHHHHHHH
Confidence 3799999999999999999999999999999997 33 3443 346899999999999999999999998888876
Q ss_pred HHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhHHH-----hhCCCCCHH
Q psy7883 349 VAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVT-----ALNPHIGYD 423 (607)
Q Consensus 349 ~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~lat-----~La~~ig~~ 423 (607)
..++......+++++...+..+|.+ +.+..+...++..+..++++|+||++||++|+..++++++ .|++ +|++
T Consensus 300 ~~~~~~~~~~~~eRD~~~~~~e~~~-~~~~~~~~~al~~~~~ll~~L~v~~~rm~~nl~~~~~i~sE~~~~~l~~-~gr~ 377 (425)
T cd01598 300 NHLSAKLPISRLQRDLTDSTVLRNI-GVAFGHSLIAYKSLLRGLDKLELNEARLLEDLDANWEVLAEPIQTVMRR-YGIP 377 (425)
T ss_pred HHHHhhhhhhhhcccccchhhhccH-HHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCcCHHHHHHHHHHHh-cChH
Confidence 5554333245678776665556767 7777777888889999999999999999999998877654 3455 9999
Q ss_pred HHHHHHHHHHH-cCCCHHH---HHHHcCCCCHHHHh--hhcCcccccC
Q psy7883 424 KAAEIAKHAYK-TGITLKE---AAVKLGYLTEQEYD--QWVKPEKMLG 465 (607)
Q Consensus 424 ~Ah~ia~~A~~-~g~~l~e---~l~~~~~Ls~eel~--~lldP~~~vg 465 (607)
+||+++.++.. ...+..+ ...+.+ .+++.-. -.|.|.+|+|
T Consensus 378 ~Ah~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 424 (425)
T cd01598 378 NPYEKLKDLTRGKRIDKETLKEFIDSLD-IPEEAKAELLALTPANYIG 424 (425)
T ss_pred hHHHHHHHHhCCCCCCHHHHHHHHHhCC-CCHHHHHHHHhCCccccCC
Confidence 99999988643 2233333 233322 3433222 2358999998
No 43
>PLN02848 adenylosuccinate lyase
Probab=100.00 E-value=6.8e-63 Score=539.50 Aligned_cols=415 Identities=17% Similarity=0.181 Sum_probs=322.4
Q ss_pred ccCCCCCCch--HhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C---CH---HHHHHHHHHHHHHHcCc
Q psy7883 17 EVPNDKYYGA--QTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-L---DS---KIADTISKAADEVISGK 87 (607)
Q Consensus 17 ~~P~~~~yg~--~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I---p~---e~a~~I~~al~~i~~~~ 87 (607)
..|++.+|++ ++|+++| ++++++++|++||.|+++++++.| | |+ ++++.|.+++.++....
T Consensus 12 ~~pl~~ry~~~~~e~~~if----------Sd~a~~~~~l~vE~ala~a~a~~g~i~~~P~i~~~aa~~i~~~~~~~~~~d 81 (458)
T PLN02848 12 LSPLDGRYWSKVKDLRPIF----------SEFGLIRYRVLVEVKWLLKLSQIPEVTEVPPFSDEANSFLEGIIAGFSVDD 81 (458)
T ss_pred CCCchhhhcCCcHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCHhh
Confidence 5799999999 8999999 899999999999999999999999 8 88 99999988873321000
Q ss_pred cccCCccccccccCCCcccccchhHHHHHHHHHHhcc--CCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHH
Q psy7883 88 LYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGG--KLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLL 165 (607)
Q Consensus 88 ~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~--~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~ 165 (607)
. . .+.......+.| +-. ++..+.+++|. +.|. .+.|||+|+|||||+||+++|++|+.+...|.
T Consensus 82 ~-~---~~~~~e~~t~hd----v~a-~~~~l~~~~~~~~~~~~-----~~~~vH~G~TsqDi~dTa~~L~lr~a~~~~l~ 147 (458)
T PLN02848 82 A-L---EVKKIERVTNHD----VKA-VEYFLKQKCKSHPELAK-----VLEFFHFACTSEDINNLSHALMLKEGVNSVVL 147 (458)
T ss_pred H-H---HHHHHHHHhCCC----cHH-HHHHHHHHhccccchhh-----hhCcccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 000000112233 222 46677888862 2110 12367789999999999999999998642399
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCC---
Q psy7883 166 CSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNT--- 242 (607)
Q Consensus 166 ~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~--- 242 (607)
+.|..++++|.++|++|+|++|+||||+|||+|||||||+++|+++|.|+++||.++. ..+++|| |+||....
T Consensus 148 ~~L~~l~~aL~~lA~~~~dt~m~GRTH~Q~A~PiTfG~~~a~w~~~L~r~~~rL~~~~---l~g~~~G-AvGt~aa~~~~ 223 (458)
T PLN02848 148 PTMDEIIKAISSLAHEFAYVPMLSRTHGQPASPTTLGKEMANFAYRLSRQRKQLSEVK---IKGKFAG-AVGNYNAHMSA 223 (458)
T ss_pred HHHHHHHHHHHHHHHHhcCCeeeccccCccceeehHHHHHHHHHHHHHHHHHHHHHHH---hccEeec-ccchhhhhhhc
Confidence 9999999999999999999999999999999999999999999999999999999882 3577777 47874332
Q ss_pred Ccch-hHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcC--CCC
Q psy7883 243 YVGF-AENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLP--ENE 319 (607)
Q Consensus 243 d~~~-~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp--~~~ 319 (607)
.+++ +..+.+.+++.|||...+.. .++++||+++++++++++++++|+|||+|++.|+ |+||+.++ +++
T Consensus 224 ~~~~d~~~v~~~la~~LGL~~~~~~---~~v~~rD~~~e~~~~La~~a~~l~kia~Di~~~~-----e~ge~~e~~~~~~ 295 (458)
T PLN02848 224 YPEVDWPAVAEEFVTSLGLTFNPYV---TQIEPHDYMAELFNAVSRFNNILIDFDRDIWSYI-----SLGYFKQITKAGE 295 (458)
T ss_pred cCCCCHHHHHHHHHHHhCCCCCCch---hhHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hcCCcccccCCCC
Confidence 1333 36788999999999852222 2579999999999999999999999999988776 56666654 358
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCH
Q psy7883 320 PGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNE 399 (607)
Q Consensus 320 ~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~ 399 (607)
+|||||||||||+.+|+++++++.+.|.+..++.....+++|++...+...|.+ +.+..++..++..+..++++|+||+
T Consensus 296 ~GSS~MP~KrNPv~~E~i~~~a~~~~~~~~~~~~~~~~~~~eRD~~~s~~e~~~-~~~~~~~~~al~~~~~~l~~L~v~~ 374 (458)
T PLN02848 296 VGSSTMPHKVNPIDFENSEGNLGLANAELSHLSMKLPISRMQRDLTDSTVLRNM-GVGLGHSLLAYKSTLRGIGKLQVNE 374 (458)
T ss_pred CCcCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHhcCcchhhccccchhhhhccH-HHHHHHHHHHHHHHHHHHccCEECH
Confidence 999999999999999999999999999988877543555678877555556766 7777777788888899999999999
Q ss_pred HHHHHhhhhhHhHHH-----hhCCCCCHHHHHHHHHHHH-HcCCC---HHHHHHHcCCCCHHHHhhhc--CcccccCCCC
Q psy7883 400 DTIAKHVNDSLMLVT-----ALNPHIGYDKAAEIAKHAY-KTGIT---LKEAAVKLGYLTEQEYDQWV--KPEKMLGPEY 468 (607)
Q Consensus 400 erm~~~l~~~~~lat-----~La~~ig~~~Ah~ia~~A~-~~g~~---l~e~l~~~~~Ls~eel~~ll--dP~~~vg~~~ 468 (607)
+||++|++.++++++ .|++ +|+++||++++++. .+.++ +++.+.... ++++..++++ .|.+|+|.+.
T Consensus 375 ~rm~~nl~~~~~~~sE~~~~~l~~-~G~~~A~e~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~y~g~~~ 452 (458)
T PLN02848 375 ARLAEDLDQTWEVLAEPIQTVMRR-YGVPEPYEKLKELTRGRAVTKESMREFIEGLE-LPEEAKDQLLKLTPHTYIGAAA 452 (458)
T ss_pred HHHHHHHHccchhHHHHHHHHHHH-hChHHHHHHHHHHHHHccCCHHHHHHHHHHcC-CCHHHHHHHHhCCchhhhchHH
Confidence 999999998887643 4565 89999999998754 33332 333333332 5655555444 8999999765
Q ss_pred Cc
Q psy7883 469 HP 470 (607)
Q Consensus 469 ~~ 470 (607)
+.
T Consensus 453 ~~ 454 (458)
T PLN02848 453 AL 454 (458)
T ss_pred HH
Confidence 43
No 44
>PF00206 Lyase_1: Lyase; InterPro: IPR022761 This entry represents the N-terminal region of lyase-1 family; PDB: 1DOF_C 1K62_B 1AOS_B 2VD6_D 2J91_B 1C3U_B 1C3C_A 3R6Y_C 3R6V_F 3R6Q_F ....
Probab=100.00 E-value=3.1e-62 Score=513.60 Aligned_cols=302 Identities=33% Similarity=0.495 Sum_probs=250.2
Q ss_pred CccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHH-----HHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHc-C
Q psy7883 14 GELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGI-----LKKAAAQVNKGFG-LDSKIADTISKAADEVIS-G 86 (607)
Q Consensus 14 g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~-----ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~-~ 86 (607)
|.|++|.+.+|+..+.++.+ +.|+. ++.|+++|+++.| ||++++++|.++|+++.. +
T Consensus 1 Gr~~~~~~~~~~~~s~~~~~----------------~~~l~~~~~~~e~a~~~a~a~~g~i~~~~a~~I~~a~~~i~~~~ 64 (312)
T PF00206_consen 1 GRYEVPTDEMYAIFSDRARF----------------DFWLAEYDIRVEAALAKALAEAGIIPKEAADAIVKALEEILEDG 64 (312)
T ss_dssp EEEEEETTHHHHHHHHHHHH----------------HHHHHSHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHHT
T ss_pred CCcCCchHHHHHHHCHHHHh----------------CCEeeccHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhh
Confidence 77888888888766655554 55555 9999999999999 999999999999998865 4
Q ss_pred ccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q psy7883 87 KLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLC 166 (607)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~ 166 (607)
+. .+.|+++..+. ++|.. ++..+.+.+|+..+. ..+++.|||+|+||||+++|+++|++|+.+.+.|.+
T Consensus 65 ~~-~~~~~~~~~~~----~~~~~----~~~~l~~~~~e~~~~--~~~~~~~vH~G~Ts~Di~~Ta~~l~lr~~~~~~l~~ 133 (312)
T PF00206_consen 65 DL-DDAFELDEIEE----DIGHA----VEANLNEVLGELLGE--PPEAGGWVHYGRTSNDIVDTALRLQLRDALLELLLE 133 (312)
T ss_dssp CT-HGHHHHCSCSS----SHHHH----HHHHHHHHHHHHHTH--SSGGGGGTTTT--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-ccccchhhhhc----cchhH----HHHHHHHHhhhhhhc--cccccccccCCCcHHHHHHHHHHHHHHHhhHHHHHH
Confidence 43 33455554433 33333 333333444421121 136677899999999999999999999987567999
Q ss_pred HHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCcccc-ccCCCCCCcc
Q psy7883 167 SLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTA-VGTGLNTYVG 245 (607)
Q Consensus 167 ~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaA-vGT~~~~d~~ 245 (607)
.|..++++|.++|++|++|+||||||+||||||||||||++|+++|.|+++||.+++++++.+|||||+ +||+++.+++
T Consensus 134 ~l~~l~~~L~~~a~~~~~t~~~grTh~Q~A~P~T~G~~~a~~~~~l~r~~~rL~~~~~~~~~~~lgga~g~gt~~~~~~~ 213 (312)
T PF00206_consen 134 RLKALIDALAELAEEHKDTPMPGRTHGQPAQPTTFGHKLAAWADELARDLERLEEARKRLNVSPLGGAVGAGTSLGIDRE 213 (312)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEETTTTTTTSSHTTSHHH
T ss_pred HHHHHHHHHHHHHHhhcCceeccccccccccceeHHHHHHHHHHHHHHHHHHHHHhHhHHHHHhccCCCccccccccCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999975 3787777776
Q ss_pred hhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCC--CCCCCC
Q psy7883 246 FAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSS 323 (607)
Q Consensus 246 ~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~--~~~GSS 323 (607)
+...+.+.|++.+||. .+..|+++|+++||+++++++++++++++|+|||+||++|+| +|+||+++|. +++|||
T Consensus 214 ~~~~~~~~L~~~~~l~-~~~~~~~~~~~~rd~~~e~~~~l~~l~~~l~kia~Dl~~~~s---~e~g~~~~~~~~~~~GSS 289 (312)
T PF00206_consen 214 FQERVAEELGEFTGLG-VPAPNWHDAVSSRDRLAELASALALLAGTLSKIAEDLRLLSS---TEIGEVEEPFPEGQVGSS 289 (312)
T ss_dssp HHHHHHHHHHHHHCST-EECSSHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---TTTSSEEEEGGGSSSCSS
T ss_pred hhhhHHhhhhhhhhcc-cchhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CceeeeecccccccCCCc
Confidence 6666666666666666 467889999999999999999999999999999999999997 5789988874 467999
Q ss_pred CCCCCCChhHHHHHHHHHHHhhc
Q psy7883 324 IMPGKVNPTQVEALTMVAAQVMG 346 (607)
Q Consensus 324 iMPqKrNP~~~E~ir~~a~~v~G 346 (607)
+|||||||+.+|+++++|++++|
T Consensus 290 ~MP~K~NP~~~E~i~~~a~~v~G 312 (312)
T PF00206_consen 290 IMPHKRNPVILENIRGLARQVIG 312 (312)
T ss_dssp SSTTCEETHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHhhhcCcC
Confidence 99999999999999999999986
No 45
>KOG2700|consensus
Probab=100.00 E-value=1.1e-47 Score=401.84 Aligned_cols=440 Identities=18% Similarity=0.157 Sum_probs=355.5
Q ss_pred cccCCCCCCch-HhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHHcCccccC
Q psy7883 16 LEVPNDKYYGA-QTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG---LDSKIADTISKAADEVISGKLYED 91 (607)
Q Consensus 16 ~~~P~~~~yg~-~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G---Ip~e~a~~I~~al~~i~~~~~~~~ 91 (607)
|++|...+|.+ ..|-.++ ++.+.+..|-++|.-+|.+..++| ||++.++++...++ +...+|
T Consensus 6 ~~~pls~ry~~~~~l~~~~----------s~~~~~~twr~lw~~lA~ae~~lgL~~itk~ai~e~~s~~~-~e~~d~--- 71 (481)
T KOG2700|consen 6 YKSPLSGRYASISELNPIF----------SDRNKFSTWRRLWLWLAEAEKELGLTTITKEAIEEMKSSRD-IENIDF--- 71 (481)
T ss_pred CCCcccceeccccccchhh----------hhhhhhhhhhHHHHhhhhhhhcCCcccchHHHHHHHHhhcc-ccccch---
Confidence 89999999997 7777777 668888999998888888888777 89999999988774 211112
Q ss_pred CccccccccCCCcccccchhHHHHH--HHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 92 HFPLSIWQTGSGTQTNMNVNEVISN--RAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQ 169 (607)
Q Consensus 92 ~~~~~~~~~~~~~di~~~vnevIe~--~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~ 169 (607)
+.....+ . .-.|+|..+ .+.+.|.. ..+ .+|+|+|++++.|.+..+.+|+.+ +.+.+.|.
T Consensus 72 --~~l~~ee-----~-r~~hdVmahvh~~~~~cp~-aag--------iihlgatsc~vtdnadli~~rd~~-k~i~~~l~ 133 (481)
T KOG2700|consen 72 --TALSPEE-----G-RYRHDVMAHVHSFGELCPI-AAG--------IIHLGATSCFVTDNADLIELRDAS-KLILPYLA 133 (481)
T ss_pred --hhcChhh-----h-hhcccHHHHHHHHHhhcch-hcc--------eEEeeeeeeeecCCccceechhHH-HHHHHHHH
Confidence 2111111 1 112444543 22333332 222 345799999999999999999985 67999999
Q ss_pred HHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCC------C
Q psy7883 170 MLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNT------Y 243 (607)
Q Consensus 170 ~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~------d 243 (607)
.+++.|..++.+|++++|.||||+|+|||+|||++.+-|..+|.+|+++|..++.++....++| |+||..+. +
T Consensus 134 ~vIdrls~~~~~~k~~~~~g~Th~q~A~l~tfgkr~~~~~qel~~~l~~f~~~~~~~~~~~~kg-a~gtqasf~~l~~~~ 212 (481)
T KOG2700|consen 134 GVIDRLSQFADKYKEKPTLGRTHLQPAQLTTFGKRMCLWIQELLRDLERFHRARTDVRFRGLKG-ATGTQASFLSLFLGD 212 (481)
T ss_pred HHHHHHHHHHHHhccceecccccCccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccc-chhhHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 47986542 3
Q ss_pred cchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCC--CCCC
Q psy7883 244 VGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPG 321 (607)
Q Consensus 244 ~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~--~~~G 321 (607)
.+..+++.+.+++.+||....+.+ .++++||..++.++.|+++++++.|+|.|+++++ .|+|+.+|- .+.|
T Consensus 213 ~~kv~~ld~Lv~k~~gf~~~~~~T--GQt~sr~~~~~~~~~la~lgat~~k~~Tdirll~-----~~~ev~epFea~q~g 285 (481)
T KOG2700|consen 213 MDKVEKLDSLVTKELGFVPMYIVT--GQTYSRKTDAEEVAPLASLGATAHKYATDIRLLA-----KFAEVEEPFEAHQIG 285 (481)
T ss_pred HHHHHHHHHHHHHHhCCCcccccc--CCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHhhccccccccc
Confidence 345567778899999999754443 5899999999999999999999999999999999 399999994 5899
Q ss_pred CCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHH
Q psy7883 322 SSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDT 401 (607)
Q Consensus 322 SSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~er 401 (607)
||.||+||||+.+|+++++++.+.......+..++..|+++....+.+.|.++|..+..+++.+....++++||.|.|++
T Consensus 286 sSaMp~krNpm~~E~itslar~l~~~v~~al~~~~~qw~Ertl~dSa~~rivlP~~Fl~ad~~L~~~~ni~~gl~v~p~~ 365 (481)
T KOG2700|consen 286 SSAMPYKRNPMRCERITSLARHLRPYVTQALNTASVQWHERTLDDSANRRIVLPDAFLTADGNLGTLLNILEGLVVYPKV 365 (481)
T ss_pred cccCCCCCCCchhHHHhHHHHHHHHHHHHHhhhHHHHHhhcccccccccceechHHHHHHHHHHHHHHHHHhhcccccHH
Confidence 99999999999999999999999998887776566667777655555568899999999999999888999999999999
Q ss_pred HHHhhhhhHhH------HHhhCCC-CCHHHHHHHHH----HH----HHcCCCHHHHHH--Hc--CCCCHHHHhhhcCccc
Q psy7883 402 IAKHVNDSLML------VTALNPH-IGYDKAAEIAK----HA----YKTGITLKEAAV--KL--GYLTEQEYDQWVKPEK 462 (607)
Q Consensus 402 m~~~l~~~~~l------at~La~~-ig~~~Ah~ia~----~A----~~~g~~l~e~l~--~~--~~Ls~eel~~lldP~~ 462 (607)
|++++.....+ +++|.+. ..|++||+.++ ++ .++|..+.+..+ ++ +....||++.+|||.+
T Consensus 366 i~r~i~~e~~~~~~eni~mAL~~~g~srq~ahe~I~~L~~~a~~~v~~e~g~~~~ie~~k~~~~~~~v~ee~~~ll~p~~ 445 (481)
T KOG2700|consen 366 IERNIRDELPFMVLENIIMALVKAGLSRQEAHEGIRKLSHQAAQVVKQEGGDNDLIERAKEDPTFKPVKEELDSLLDPLN 445 (481)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHhcccccccchHHHHHhhccchh
Confidence 99999865554 2466554 56999999754 33 567777655433 22 4678999999999999
Q ss_pred ccCCCC---CcccCCCccccccchHHHHHHHhhhccC
Q psy7883 463 MLGPEY---HPYFKPDNNETIFHTEKVISQQILAAKV 496 (607)
Q Consensus 463 ~vg~~~---~~~~~~~v~~~~~~~~~~v~~~~~~~~~ 496 (607)
|+|.+. +.|...+|.+++-.|...|. ..+.+||
T Consensus 446 f~gra~dQie~~v~~~~~~a~a~~~~~~~-~~v~L~~ 481 (481)
T KOG2700|consen 446 FTGRAVDQIEKFVPKEVVPALAAYALAVD-EAVHLGV 481 (481)
T ss_pred cccccHHHHHHHhhhhhhHHHHHHHHHhh-hhhccCC
Confidence 999996 77888899998999999987 4455543
No 46
>cd01594 Lyase_I_like Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions. Lyase class I_like superfamily of enzymes that catalyze beta-elimination reactions and are active as homotetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. This superfamily contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase. The lyase class I family comprises proteins similar to class II fumarase, aspartase, adenylosuccinate lyase, argininosuccinate lyase, and 3-carboxy-cis, cis-muconate lactonizing enzyme which, for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. Histidine or phenylalanine ammonia-lyase catalyze a beta-elimination of ammonia from histidine and phenylalanine, respective
Probab=100.00 E-value=1.1e-33 Score=283.67 Aligned_cols=164 Identities=41% Similarity=0.540 Sum_probs=152.4
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHH
Q psy7883 136 DHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYG 215 (607)
Q Consensus 136 ~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd 215 (607)
.++|+|+||||+.+|++++++|+.+. .+...+..+.+++..+|++|++++||||||+|+|+|+||||++.+|.+.|.|+
T Consensus 35 ~~~h~g~s~~d~~~t~~~~~~~~~l~-~l~~~l~~~~~~l~~~a~~~~~~~~~~~th~q~A~p~t~g~~~~~~~~~l~~~ 113 (231)
T cd01594 35 ALVHKGRSSNDIGTTALRLALRDALD-DLLPLLKALIDALALKAEAHKGTVMPGRTHLQDAQPVTLGYELRAWAQVLGRD 113 (231)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCEeecccccccCccccHHHHHHHHHHHHHHH
Confidence 37889999999999999999999876 59999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHH
Q psy7883 216 IERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKI 295 (607)
Q Consensus 216 ~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRi 295 (607)
++||.++ +++++++.++.++.+|+||
T Consensus 114 ~~rL~~~------------------------------------------------------~~~~~~~~l~~~~~~l~r~ 139 (231)
T cd01594 114 LERLEEA------------------------------------------------------AVAEALDALALAAAHLSKI 139 (231)
T ss_pred HHHHHHH------------------------------------------------------HHHHHHHHHHHHHHHHHHH
Confidence 9999998 8899999999999999999
Q ss_pred HHHHHHHccCCCCceeeEEcCC--CCCCCCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccc
Q psy7883 296 ANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSN 357 (607)
Q Consensus 296 A~Dl~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~ 357 (607)
|+|+++|++. |++++.+|+ .++|||+||||+||+.+|.+++++..+.|....+.....+
T Consensus 140 a~d~~~~~~~---~~~~~~~~~~~~~~gSS~mp~k~Np~~~e~~~~~~~~~~~~~~~~~~~~~~ 200 (231)
T cd01594 140 AEDLRLLLSG---EFGELGEPFLPGQPGSSIMPQKVNPVAAELVRGLAGLVIGNLVAVLTALKG 200 (231)
T ss_pred HHHHHHHcCC---CCCeeeCccCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHhhHHHHHHHHhc
Confidence 9999999984 677777776 4899999999999999999999999999998777654433
No 47
>PRK08937 adenylosuccinate lyase; Provisional
Probab=99.96 E-value=2.7e-29 Score=250.67 Aligned_cols=178 Identities=26% Similarity=0.301 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCC--CCCCCCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccc
Q psy7883 284 ALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFE 361 (607)
Q Consensus 284 ~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e 361 (607)
+++.++++|+|||+||++|+| +|||||.+|. +++|||||||||||+.+|.++++++++.|+..+++... .+++|
T Consensus 22 ~l~~i~~~l~ria~Dl~~~~s---~e~gei~~~~~~~~~gSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~-~~~~e 97 (216)
T PRK08937 22 VLALIATSLEKFANEIRLLQR---SEIREVEEPFAKGQKGSSAMPHKRNPIGSERITGLARVLRSYLVTALENV-PLWHE 97 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---cccceeecccccCCCCCccCCCccCcHHHHHHHHHHHHHHHHHHHHHHHh-HHHhc
Confidence 999999999999999999997 6999999994 58999999999999999999999999999998887655 67788
Q ss_pred cccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhH--hHHHh----hC-CCCCHHHHHHHHH----
Q psy7883 362 LNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSL--MLVTA----LN-PHIGYDKAAEIAK---- 430 (607)
Q Consensus 362 ~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~--~lat~----La-~~ig~~~Ah~ia~---- 430 (607)
++...+...|..++.+......++..+..++++|+||++||++++..++ .+++. |+ .++||++||++++
T Consensus 98 rd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~~~~~~~a~~l~~~L~~~g~~~~~Ah~~v~~~~~ 177 (216)
T PRK08937 98 RDLSHSSAERIALPDAFLALDYILNRFVNILENLVVFPENIERNLDKTLGFIATERVLLELVEKGMGREEAHELIREKAM 177 (216)
T ss_pred cCCchhHHHhhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHHhcChHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 8876666567666766677777778888999999999999999999743 33333 33 4799999999875
Q ss_pred HHHHcCCCHHHHHHHcC----CCCHHHHhhhcCcccccC
Q psy7883 431 HAYKTGITLKEAAVKLG----YLTEQEYDQWVKPEKMLG 465 (607)
Q Consensus 431 ~A~~~g~~l~e~l~~~~----~Ls~eel~~lldP~~~vg 465 (607)
.+.++|+++.+.+.+.+ .+++++++.+|||.+|+|
T Consensus 178 ~~~~~g~~~~~~~~~~~~~~~~l~~~~l~~~ldp~~~vg 216 (216)
T PRK08937 178 EAWKNQKDLRELLEADERFTKQLTKEELDELFDPEAFVG 216 (216)
T ss_pred HHHHhCCCHHHHHHhChHhHhcCCHHHHHHHhCHHhhcC
Confidence 46678999999888763 689999999999999987
No 48
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=98.68 E-value=1.1e-08 Score=80.60 Aligned_cols=55 Identities=53% Similarity=0.823 Sum_probs=48.3
Q ss_pred HHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCC
Q psy7883 412 LVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGP 466 (607)
Q Consensus 412 lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~ 466 (607)
++|.|++.+||+.|.+|+++|.++|++++|++.+.+.||+++++++|||..++++
T Consensus 1 laTaL~p~iGYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~p~~mt~P 55 (55)
T PF10415_consen 1 LATALNPYIGYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLDPERMTNP 55 (55)
T ss_dssp GGGGGHHHHHHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTSHHHHTT-
T ss_pred CeeeccchhccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcCHHHcCCc
Confidence 3688999999999999999999999999999999999999999999999998764
No 49
>PF10397 ADSL_C: Adenylosuccinate lyase C-terminus; InterPro: IPR019468 Adenylosuccinate lyase catalyses two steps in the synthesis of purine nucleotides: the conversion of succinylaminoimidazole-carboxamide ribotide into aminoimidazole-carboxamide ribotide (the fifth step of de novo IMP biosynthesis); the formation of adenosine monophosphate (AMP) from adenylosuccinate (the final step in the synthesis of AMP from IMP) []. This entry represents the C-terminal, seven alpha-helical, domain of adenylosuccinate lyase [].; PDB: 1YIS_A 1C3U_B 1C3C_A 3C8T_A 2PFM_B 1RE5_D 1Q5N_A 2VD6_D 2J91_B 2X75_A.
Probab=97.93 E-value=4.1e-06 Score=71.25 Aligned_cols=58 Identities=29% Similarity=0.491 Sum_probs=45.5
Q ss_pred HhhCCC-CCHHHHHHHHH----HHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCCcc
Q psy7883 414 TALNPH-IGYDKAAEIAK----HAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYHPY 471 (607)
Q Consensus 414 t~La~~-ig~~~Ah~ia~----~A~~~g~~l~e~l~~~----~~Ls~eel~~lldP~~~vg~~~~~~ 471 (607)
.+|++. +|+++||+++. +|.++|.+|.|++.++ +.|+.++|+++|||..|+|.++.++
T Consensus 11 ~~L~~~G~gR~~Ah~lv~~~a~~a~~~~~~l~e~l~~d~~i~~~ls~~el~~l~dp~~ylg~~~~i~ 77 (81)
T PF10397_consen 11 LALAEKGLGRQEAHELVQEAAMEAWENGRDLREVLLADPEIAAYLSEEELEELFDPESYLGNADEIV 77 (81)
T ss_dssp HHHHHTTH-HHHHHHHHHHHHHHHHHTTS-HHHHHCTTHHHHTTSHHHHHHHHT-GGGGCTTHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHhHCCHHHHHhhcCHHHHHhhHHHHH
Confidence 455555 99999999864 5778999999999854 5799999999999999999887654
No 50
>PF14698 ASL_C2: Argininosuccinate lyase C-terminal; PDB: 1XWO_A 2E9F_A 1TJW_C 1TJU_A 1DCN_B 1K7W_B 1HY1_C 1TJV_B 1AUW_A 1U15_B ....
Probab=97.71 E-value=2.8e-05 Score=64.37 Aligned_cols=60 Identities=28% Similarity=0.343 Sum_probs=43.1
Q ss_pred hHHHhhCC-----CCCHHHHHHHHH----HHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCcccCCCcccccc
Q psy7883 411 MLVTALNP-----HIGYDKAAEIAK----HAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIF 481 (607)
Q Consensus 411 ~lat~La~-----~ig~~~Ah~ia~----~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~~~~~~~~~v~~~~~ 481 (607)
+++|+||+ +++||+||++++ .|.++|+++.+ ++.++++++ ++-+.+++.+ ++
T Consensus 2 ~~ATdlAD~LVr~GipFR~AH~iVg~~V~~a~~~~~~l~~-------l~~~~~~~~-----------~~~~~~~~~~-~l 62 (70)
T PF14698_consen 2 STATDLADYLVRKGIPFREAHHIVGRLVRLAEEEGKPLSE-------LTLEELQEI-----------SPEFEEDVRE-AL 62 (70)
T ss_dssp GGHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTTS-GGG-------S-HHHHHHH------------TT--GGGGG-GS
T ss_pred ccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCChhh-------CCHHHHHHH-----------hHHhHHHHHH-HC
Confidence 56677654 799999999875 46678888887 999999985 4555788998 99
Q ss_pred chHHHHHH
Q psy7883 482 HTEKVISQ 489 (607)
Q Consensus 482 ~~~~~v~~ 489 (607)
+++++|++
T Consensus 63 ~~~~~V~~ 70 (70)
T PF14698_consen 63 DPEASVEA 70 (70)
T ss_dssp SHHHHHTT
T ss_pred CHHHHhcC
Confidence 99999863
No 51
>PF08328 ASL_C: Adenylosuccinate lyase C-terminal; InterPro: IPR013539 This domain is found at the C terminus of adenylosuccinate lyase(ASL; PurB in Escherichia coli). It has been identified in bacteria, eukaryotes and archaea and is found together with the lyase domain IPR000362 from INTERPRO. ASL catalyses the cleavage of succinylaminoimidazole carboxamide ribotide to aminoimidazole carboxamide ribotide and fumarate and the cleavage of adenylosuccinate to adenylate and fumarate []. ; GO: 0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity, 0006188 IMP biosynthetic process; PDB: 2HVG_A 2QGA_C 2PTS_A 2PTR_A 2PTQ_B 3BHG_A 3GZH_A.
Probab=93.47 E-value=0.24 Score=44.76 Aligned_cols=74 Identities=16% Similarity=0.265 Sum_probs=43.0
Q ss_pred HHhhhccccCHHHHHHhhhhhHhHHHh----hCCCCCHHHHHHHHHHHHHcCCCH-----HHHHHHcCCCCHHHHhhh--
Q psy7883 389 TKCVTGILPNEDTIAKHVNDSLMLVTA----LNPHIGYDKAAEIAKHAYKTGITL-----KEAAVKLGYLTEQEYDQW-- 457 (607)
Q Consensus 389 ~~vl~gL~Vn~erm~~~l~~~~~lat~----La~~ig~~~Ah~ia~~A~~~g~~l-----~e~l~~~~~Ls~eel~~l-- 457 (607)
.+-+..|.||+++|.+.|+++|....+ +-...|+.++||..++.. .|+.+ .+.+.... +++++-+++
T Consensus 31 lkGl~Kl~vn~~~l~~dL~~nWeVlaEpIQTvmRr~g~~~pYE~LK~lT-Rg~~it~~~l~~fI~~L~-ip~~~k~~L~~ 108 (115)
T PF08328_consen 31 LKGLGKLEVNEERLAEDLDENWEVLAEPIQTVMRRYGIPNPYEKLKELT-RGKKITKEDLREFIESLD-IPEEAKARLLA 108 (115)
T ss_dssp HHHHHTEEE-HHHHHHHHCT-GGGGHHHHHHHHHHTT-SSHHHHHHHHH-TTS---HHHHHHHHHTSS-S-HHHHHHHHH
T ss_pred HHHHhcccCCHHHHHHHHHHCHHHHHHHHHHHHHHcCCCCHHHHHHHHH-cCCCCCHHHHHHHHHhCC-CCHHHHHHHHh
Confidence 367888999999999999999975321 223568889999888754 45443 33333334 676664444
Q ss_pred cCccccc
Q psy7883 458 VKPEKML 464 (607)
Q Consensus 458 ldP~~~v 464 (607)
+.|.+|+
T Consensus 109 ltP~~Y~ 115 (115)
T PF08328_consen 109 LTPATYI 115 (115)
T ss_dssp --CCC--
T ss_pred cCccccC
Confidence 3676664
No 52
>KOG2700|consensus
Probab=88.06 E-value=7.9 Score=42.78 Aligned_cols=32 Identities=13% Similarity=-0.042 Sum_probs=26.0
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHhhcch
Q psy7883 317 ENEPGSSIMPGKVNPTQVEALTMVAAQVMGNH 348 (607)
Q Consensus 317 ~~~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~ 348 (607)
++..|+|+||+|.||+.++...+.-....+..
T Consensus 325 Ertl~dSa~~rivlP~~Fl~ad~~L~~~~ni~ 356 (481)
T KOG2700|consen 325 ERTLDDSANRRIVLPDAFLTADGNLGTLLNIL 356 (481)
T ss_pred hcccccccccceechHHHHHHHHHHHHHHHHH
Confidence 35789999999999999999988766555443
No 53
>PF10925 DUF2680: Protein of unknown function (DUF2680); InterPro: IPR024485 Members in this family of proteins are annotated as YckD however currently no function is known.
Probab=55.63 E-value=41 Score=27.02 Aligned_cols=39 Identities=28% Similarity=0.251 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q psy7883 46 EAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVI 84 (607)
Q Consensus 46 ~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~ 84 (607)
.++...+++..++..--..+.| |+++.|+.|.+..+...
T Consensus 10 ~~l~~qm~e~kK~~idk~Ve~G~iTqeqAd~ik~~id~~~ 49 (59)
T PF10925_consen 10 KALYKQMLELKKQIIDKYVEAGVITQEQADAIKKHIDQRQ 49 (59)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 4778899999999999999999 99999999999987643
No 54
>PF10078 DUF2316: Uncharacterized protein conserved in bacteria (DUF2316); InterPro: IPR018757 Members of this family of hypothetical bacterial proteins have no known function.
Probab=33.29 E-value=2.2e+02 Score=24.84 Aligned_cols=54 Identities=17% Similarity=0.321 Sum_probs=41.2
Q ss_pred HHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCcccCCCccccccchHHHHHHHhhhccCCCC
Q psy7883 433 YKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVISQQILAAKVLPP 499 (607)
Q Consensus 433 ~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~~~~ 499 (607)
...|.+..+++...+ +|.++++++|+-. ..+... +|..++.+++.....|.-|.
T Consensus 20 ~~~~ls~~~ia~dL~-~s~~~le~vL~l~-----------~~~~~~-vW~lRdyL~~~i~~~G~eP~ 73 (89)
T PF10078_consen 20 ELSGLSLEQIAADLG-TSPEHLEQVLNLK-----------QPFPED-VWILRDYLNDKIKEQGKEPV 73 (89)
T ss_pred HHcCCCHHHHHHHhC-CCHHHHHHHHcCC-----------CCCccc-chHHHHHHHHHHHHcCCCCC
Confidence 356888888888887 9999999998775 223444 99999999777776665553
No 55
>CHL00180 rbcR LysR transcriptional regulator; Provisional
Probab=21.01 E-value=3.5e+02 Score=27.83 Aligned_cols=59 Identities=22% Similarity=0.213 Sum_probs=44.7
Q ss_pred HHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCC
Q psy7883 180 QEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTG 239 (607)
Q Consensus 180 ~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~ 239 (607)
|+.-++...=|| +..-.||..|..|..++..+.+..+++.+........+-|-=-+|+.
T Consensus 44 E~~lg~~Lf~R~-~r~~~lT~~G~~l~~~a~~ll~~~~~~~~~~~~~~~~~~g~l~ig~~ 102 (305)
T CHL00180 44 EKQLNIPLFDRS-KNKASLTEAGELLLRYGNRILALCEETCRALEDLKNLQRGTLIIGAS 102 (305)
T ss_pred HHHhCCEEEEec-CCCceECHhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCceEEEEEc
Confidence 345577788887 56799999999999999999999999998887776544332113553
Done!