Query psy7883
Match_columns 607
No_of_seqs 252 out of 1887
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 21:15:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7883.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7883hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gtd_A Fumarase C, fumarate hy 100.0 3E-110 1E-114 913.8 42.7 460 3-465 22-482 (482)
2 3e04_A Fumarase, fumarate hydr 100.0 6E-110 2E-114 911.8 40.9 462 4-466 28-489 (490)
3 3r6q_A Aspartase; aspartate am 100.0 4E-107 1E-111 891.0 42.6 459 5-467 4-463 (468)
4 3ocf_A Fumarate lyase:delta cr 100.0 9E-107 3E-111 888.1 41.0 455 6-463 23-478 (478)
5 4hgv_A Fumarase C, fumarate hy 100.0 3E-106 1E-110 888.4 43.1 463 2-467 32-495 (495)
6 1fur_A Fumarase C, FUMC; hydro 100.0 6E-104 2E-108 867.1 45.7 461 4-467 2-463 (467)
7 4adm_A Fumarase C, fumarate hy 100.0 2E-104 9E-109 871.9 41.9 454 4-467 30-489 (495)
8 1yfm_A Fumarase, YFUM; lyase, 100.0 7E-104 2E-108 868.4 43.6 458 6-466 28-487 (488)
9 1jsw_A L-aspartase, L-aspartat 100.0 4E-103 1E-107 863.7 42.6 458 6-467 5-466 (478)
10 1vdk_A Fumarase C, fumarate hy 100.0 1E-102 4E-107 857.3 38.8 459 6-467 3-463 (466)
11 1q5n_A 3-carboxy-CIS,CIS-mucon 100.0 1E-80 3.5E-85 682.3 30.5 417 19-471 7-442 (454)
12 1re5_A 3-carboxy-CIS,CIS-mucon 100.0 1.1E-80 3.9E-85 681.3 29.9 415 18-471 4-438 (450)
13 2e9f_A Argininosuccinate lyase 100.0 4.9E-81 1.7E-85 685.5 23.6 437 21-512 3-459 (462)
14 3c8t_A Fumarate lyase; structu 100.0 5.3E-80 1.8E-84 675.9 31.7 412 18-471 6-436 (451)
15 1k7w_A Delta 2 crystallin; eye 100.0 1.1E-80 3.7E-85 683.7 23.9 435 23-513 14-462 (468)
16 1c3c_A Protein (adenylosuccina 100.0 2.4E-79 8.2E-84 667.1 32.1 402 23-471 3-424 (429)
17 2pfm_A Adenylosuccinate lyase; 100.0 6.5E-79 2.2E-83 665.9 33.6 404 22-471 12-436 (444)
18 1tj7_A Argininosuccinate lyase 100.0 1.9E-79 6.5E-84 672.0 27.5 437 22-512 6-456 (457)
19 1dof_A Adenylosuccinate lyase; 100.0 1.4E-75 4.9E-80 632.3 35.4 377 18-445 4-396 (403)
20 4eei_A Adenylosuccinate lyase; 100.0 1.6E-74 5.5E-79 629.3 29.5 374 22-445 3-394 (438)
21 2ptr_A Adenylosuccinate lyase; 100.0 1.8E-75 6.1E-80 641.6 22.1 418 18-471 10-452 (462)
22 2j91_A Adenylosuccinate lyase; 100.0 2.5E-74 8.7E-79 637.5 25.3 422 11-472 30-480 (503)
23 1yis_A Adenylosuccinate lyase; 100.0 3.6E-74 1.2E-78 634.0 24.5 418 15-472 6-452 (478)
24 2fel_A 3-carboxy-CIS,CIS-mucon 100.0 8.9E-70 3.1E-74 578.5 25.9 348 16-405 6-355 (359)
25 3bhg_A Adenylosuccinate lyase; 100.0 3.3E-69 1.1E-73 591.5 27.3 417 17-471 12-455 (459)
26 2qga_B Adenylosuccinate lyase; 100.0 7.1E-70 2.4E-74 597.7 22.0 415 17-471 8-454 (465)
27 3fxd_A Protein ICMQ; helix bun 20.9 58 0.002 24.8 2.4 21 68-88 5-26 (57)
No 1
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii}
Probab=100.00 E-value=2.8e-110 Score=913.81 Aligned_cols=460 Identities=65% Similarity=0.980 Sum_probs=442.9
Q ss_pred CCCccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH
Q psy7883 3 KDGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAAD 81 (607)
Q Consensus 3 ~~~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~ 81 (607)
|+++|+|+|++|+++||.|+|||.||+|+++||++|+.. .|+++|++++.||+|+|++|.++| ||++.+++|.++|+
T Consensus 22 ~~~~r~e~d~~g~~~vp~~~~~g~qt~Ra~~nf~i~~~~--~~~~~i~a~~~vk~AaA~an~~~G~l~~~~a~aI~~a~~ 99 (482)
T 3gtd_A 22 MKNYRIESDSFGEIQIEEKFYWGAQTQRSLNNFKISKQK--MPKILIRALAILKKCAAQVNYEFGDLEYKIATSIDKAID 99 (482)
T ss_dssp --CEEEEEETTEEEEEETTCCCCHHHHHHHHHCCCCSCB--CCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred cccCcCccccCCCccCCcccccCHHHHHHHHhccccCCC--CCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 567899999999999999999999999999999999974 789999999999999999999999 99999999999999
Q ss_pred HHHcCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHH
Q psy7883 82 EVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIH 161 (607)
Q Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~ 161 (607)
+|.+|++ +++|+++++|+|+|+++|||+||||++++++++|.+.|+|.+||||+|||+||||||+++|+++|++++++.
T Consensus 100 ev~~g~~-~~~fp~~~~q~gsGt~~Nmn~NevIa~ra~e~~G~~~g~~~~vHpndhVn~gqSsND~~~Ta~~l~~~~~~~ 178 (482)
T 3gtd_A 100 RILAGEF-EDNFPLVVWQTGSGTQTNMNMNEVIASIANEELTGKKGGKFPVHPNDHVNKGQSSNDSFPTAMHIATVLATK 178 (482)
T ss_dssp HHHHTTT-TTSCCCBSSSCTTCHHHHHHHHHHHHHHHHHHHHSCCCSSSSSCCCCCCTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCc-ccCCCeehhccCCCccccchHHHHHHHHHHHHhCcccCCcCcCCccccCCCCCChhhHHHHHHHHHHHHHHH
Confidence 9999887 889999999999999999999999999999999988999988999999999999999999999999998876
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCC
Q psy7883 162 NRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLN 241 (607)
Q Consensus 162 ~~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~ 241 (607)
+.|.+.|..|+++|.++|++|+|++||||||+|+||||||||+|++|+++|.||++||.+++++++.+||||||+||+++
T Consensus 179 ~~L~~~L~~L~~~L~~kA~e~~d~v~~GrTHlQ~A~P~TlG~~~~~~~~~l~rd~~RL~~~~~~l~~~~lGgtAvGT~~~ 258 (482)
T 3gtd_A 179 QQLIPALNNLLTYLQDKSKDWDKIIKIGRTHLQDATPLTLKQEFSGYITQIEYALERIEDALKKVYLLAQGGTAVGTGIN 258 (482)
T ss_dssp HTHHHHHHHHHHHHHHHHTTGGGCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHTTTTEECTTCTTTSSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHccCcEeeccccCccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCc
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999998999999
Q ss_pred CCcchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCC
Q psy7883 242 TYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPG 321 (607)
Q Consensus 242 ~d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~G 321 (607)
++++|+.++.++++++|||+..+.+|++|++++||++++++++|+.++++|+|||+||++|+|+||+|||||.+|+.++|
T Consensus 259 ~~~~~~~~v~~~la~~lGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp~~~~G 338 (482)
T 3gtd_A 259 SKIGFDIKFAQKVAEFTQQPFKTAPNKFESLAAHDALVEFSGTLNTIAVSLMKIANDIRLLGSGPRCGLGELHLPENEPG 338 (482)
T ss_dssp SCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECCCCSCC
T ss_pred CCchhHHHHHHHHHHHhCCCCccccchhhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCeeEEECCCCCCC
Confidence 99999999999999999999877899999999999999999999999999999999999999999999999999998999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHH
Q psy7883 322 SSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDT 401 (607)
Q Consensus 322 SSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~er 401 (607)
|||||||+||+.+|.++++|++++|+..++++++..+++|++.++|++.++++++++++.++++.++.+|++||+||++|
T Consensus 339 SSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~pl~~~~~l~s~~ll~~~~~~~~~~~v~gl~vn~er 418 (482)
T 3gtd_A 339 SSIMPGKVNPTQVEALTMVCTQVMGNHVTVTIAGSNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIAR 418 (482)
T ss_dssp CSSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCEECHHH
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHH
Confidence 99999999999999999999999999999998889999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccC
Q psy7883 402 IAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLG 465 (607)
Q Consensus 402 m~~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg 465 (607)
|+++++++++++|+|++++||+.|++++++|.++|++++|++.+.++||++||+++|||.+|+|
T Consensus 419 m~~~l~~s~~lvTaLa~~iGy~~a~~ia~~A~~~g~~l~e~~~~~~~ls~eeld~~ldP~~~~g 482 (482)
T 3gtd_A 419 INTLRDKSLMLVTVLNPHIGYDNAAKIAKEAHKYGITLKEAAKKLNFLSEEEFDKIVVPEKMIS 482 (482)
T ss_dssp HHHHHHHCGGGHHHHHHHHCHHHHHHHHHHHHHHTCCHHHHHHHTTSCCHHHHHHHHSCC----
T ss_pred HHHHHhhhhHHHHHhhhHHHHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHcCHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999987
No 2
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.1e-110 Score=911.79 Aligned_cols=462 Identities=75% Similarity=1.151 Sum_probs=443.1
Q ss_pred CCccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Q psy7883 4 DGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFGLDSKIADTISKAADEV 83 (607)
Q Consensus 4 ~~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~GIp~e~a~~I~~al~~i 83 (607)
+++|+|+|++|+++||.|+|||.||+|++.||++|+...+.++.+|+++..|++|+|++|.++|||++.+++|.++|++|
T Consensus 28 ~~~r~e~D~~G~~~vp~~~~~g~qt~ra~~nf~i~~~~~~~~~~~i~a~~~vkkAaA~an~~~Gl~~~~a~aI~~a~~ev 107 (490)
T 3e04_A 28 NSFRIEYDTFGELKVPNDKYYGAQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQDYGLDPKIANAIMKAADEV 107 (490)
T ss_dssp -CEEEEEETTEEEEEETTCCCCHHHHHHHHHCCCSCGGGBCCHHHHHHHHHHHHHHHHHGGGGTCCHHHHHHHHHHHHHH
T ss_pred cCCCcccccCcCccCcchhhhhHHHHHHHHcccccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHH
Confidence 34899999999999999999999999999999999975557899999999999999999999999999999999999999
Q ss_pred HcCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHH
Q psy7883 84 ISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNR 163 (607)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~ 163 (607)
.+|++ +++||++++|+|+|+++|||+|||||++++|++|.+.|+|.+||||+|||+||||||+++|+++|++++++.+.
T Consensus 108 ~~g~~-~~~Fp~~~~q~Gsgt~~nmn~NEvia~ra~e~~G~~~g~~~~vHpndhVn~gqSsND~~~Ta~~l~~~~~~~~~ 186 (490)
T 3e04_A 108 AEGKL-NDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPNDHVNKSQSSNDTFPTAMHIAAAIEVHEV 186 (490)
T ss_dssp HTTSC-GGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCTTSCCSSCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HcCCc-ccCCceeeecCCCCCcccccHHHHHHHHHHHHhCcccCCCCCCCcccccCCCCChhhHHHHHHHHHHHHHHHHH
Confidence 99887 78999999999999999999999999999999998899998899999999999999999999999999887667
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCC
Q psy7883 164 LLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTY 243 (607)
Q Consensus 164 L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d 243 (607)
|.+.|..|+++|.++|++|+|++||||||+|+||||||||||++|+++|.||++||.+++++++.+||||||+||+++++
T Consensus 187 L~~~L~~L~~aL~~kA~e~~d~v~~GRTHlQ~A~PiTlG~~~~~~a~~l~rd~~RL~~~~~~l~~~~lGgtAvGTg~~~~ 266 (490)
T 3e04_A 187 LLPGLQKLHDALDAKSKEFAQIIKIGRTHTQDAVPLTLGQEFSGYVQQVKYAMTRIKAAMPRIYELAAGGTAVGTGLNTR 266 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHTCTTTSEECTTCTTTSSCTTSC
T ss_pred HHHHHHHHHHHHHHHHHHhhCceeeccccCccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999899999999
Q ss_pred cchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCC
Q psy7883 244 VGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSS 323 (607)
Q Consensus 244 ~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSS 323 (607)
++|+.++.++++++|||+..+.+|++|++++||++++++++|+.++++|+|||+||++|+||||+|||||.+|+.++|||
T Consensus 267 ~~~~~~v~~~la~~lGl~~~~~~n~~da~~~rD~~ve~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp~~~~GSS 346 (490)
T 3e04_A 267 IGFAEKVAAKVAALTGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSGPRSGLGELILPENEPGSS 346 (490)
T ss_dssp TTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECCCCSCC--
T ss_pred hhHHHHHHHHHHHHhCCCCcCCCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEECCCCCCCCC
Confidence 99999999999999999986789999999999999999999999999999999999999999999999999999899999
Q ss_pred CCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHH
Q psy7883 324 IMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIA 403 (607)
Q Consensus 324 iMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~ 403 (607)
|||||+||+.+|.++++|++|+|+..++++++.++++|++.++|++.++++++++++.++++.++.+|++||+||++||+
T Consensus 347 iMP~K~NPv~~E~i~~~a~~v~G~~~ai~~a~~~g~~eln~~~p~~~~~ll~s~~ll~~~~~~~~~~~v~gl~vn~erm~ 426 (490)
T 3e04_A 347 IMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERIN 426 (490)
T ss_dssp ---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCC
Q psy7883 404 KHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGP 466 (607)
Q Consensus 404 ~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~ 466 (607)
++++++++++|+|++++||+.|++++++|.++|++++|++.+.++||++||+++|||.+|+|+
T Consensus 427 ~~l~~s~~lvTaLa~~iGy~~a~~iak~A~~~g~~l~e~~~~~~~ls~eeld~~ldP~~~~g~ 489 (490)
T 3e04_A 427 KLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGSTLKETAIELGYLTAEQFDEWVKPKDMLGP 489 (490)
T ss_dssp HHHHHCSGGGGGGHHHHCHHHHHHHHHHHHHHTCCHHHHHHHHTSCCHHHHHHHCCGGGSSCC
T ss_pred HHHhhchHHHHHhhhHHHHHHHHHHHHHHHHHCCCHHHHHHHcCCCCHHHHHHHcCHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999986
No 3
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A
Probab=100.00 E-value=3.8e-107 Score=891.00 Aligned_cols=459 Identities=45% Similarity=0.759 Sum_probs=440.1
Q ss_pred CccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHH
Q psy7883 5 GVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEV 83 (607)
Q Consensus 5 ~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i 83 (607)
.+|+|+|++|+++||.|+|||.||+|++.||++|+. +.++++|++|+.||+|+|++|.++| ||++++++|.++|++|
T Consensus 4 ~~r~e~d~~g~~~vp~~~~yg~qt~ra~~nf~i~~~--~~~~~~i~a~~~vk~A~A~a~~~~Gil~~~~a~aI~~a~~~i 81 (468)
T 3r6q_A 4 DVRIEKDFLGEKEIPKDAYYGVQTIRATENFPITGY--RIHPELIKSLGIVKKSAALANMEVGLLDKEVGQYIVKAADEV 81 (468)
T ss_dssp -CEEEEETTEEEEECTTCCCCHHHHHHHHHCCSSCC--CCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred CCCCccccCCCccCCcccccCHHHHHHHHccccCCC--CCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 489999999999999999999999999999999986 4789999999999999999999999 9999999999999999
Q ss_pred HcCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHH
Q psy7883 84 ISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNR 163 (607)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~ 163 (607)
.++.+ +++|+++.+++++++++|||+||||++++.+++|++.|+|.++|||+|||+||||||+++|+++|++|+.+. .
T Consensus 82 ~~~~~-~~~f~~~~~~~g~gt~~nmnvnevia~~~~e~~G~~~g~y~~vHpndhVn~g~SsnDv~~Ta~~L~~r~~l~-~ 159 (468)
T 3r6q_A 82 IEGKW-NDQFIVDPIQGGAGTSINMNANEVIANRALELMGEEKGNYSKISPNSHVNMSQSTNDAFPTATHIAVLSLLN-Q 159 (468)
T ss_dssp HTTTT-GGGCCSCSSCSSTTHHHHHHHHHHHHHHHHHHTTCCTTCTTTSCCCCCCTTTCCHHHHHHHHHHHHHHHHHH-H
T ss_pred HhCcc-ccCCCccHHhccccccccccHHHHHHHHHHHHhccccCCcCccCCccCCCCCCChHhHHHHHHHHHHHHHHH-H
Confidence 98766 788999999999999999999999999999999987787766899999999999999999999999999875 6
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCC
Q psy7883 164 LLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTY 243 (607)
Q Consensus 164 L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d 243 (607)
|.+.|..|+++|.++|++|+|++||||||+|+||||||||||++|+++|.||++||.+++++++.+||||||+||+++++
T Consensus 160 l~~~L~~L~~~L~~~A~~~~~~v~~GrTHlQ~A~PiT~G~~~~~~~~~l~rd~~RL~~~~~~l~~~~lGgtAvGT~~~~~ 239 (468)
T 3r6q_A 160 LIETTKYMQQEFMKKADEFAGVIKMGRTHLQDAVPILLGQEFEAYARVIARDIERIANTRNNLYDINMGATAVGTGLNAD 239 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHTHHHHTEECTTCTTTSSCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHccCcEEecCcCCccceeccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCeecCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred cchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCC
Q psy7883 244 VGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSS 323 (607)
Q Consensus 244 ~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSS 323 (607)
+++...+.++++++|||+..+.+|+++|+++||++++++++|+.++++|+|||+||++|+|+||+|||||.+|+.++|||
T Consensus 240 ~~~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~Kia~DlrllsS~pr~g~gei~lp~~~~GSS 319 (468)
T 3r6q_A 240 PEYISIVTEHLAKFSGHPLRSAQHLVDATQNTDCYTEVSSALKVCMINMSKIANDLRLMASGPRAGLSEIVLPARQPGSS 319 (468)
T ss_dssp HHHHHHHHHHHHHHHCSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSCCCEECCCCSCCCT
T ss_pred hHHHHHHHHHHHHHhCCCCccccchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeEEECCCCCCCCC
Confidence 99999999999999999986789999999999999999999999999999999999999999999999999998899999
Q ss_pred CCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHH
Q psy7883 324 IMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIA 403 (607)
Q Consensus 324 iMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~ 403 (607)
||||||||+.+|.++++|++++|+..++++....+++|++.++|.+.+++++++.++.+++..+..+|++||+||++||+
T Consensus 320 iMP~K~NP~~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~p~i~~~l~~s~~~l~~~l~~~~~~~i~gl~vn~erm~ 399 (468)
T 3r6q_A 320 IMPGKVNPVMPEVMNQVAFQVFGNDLTITSASEAGQFELNVMEPVLFFNLIQSISIMTNVFKSFTENCLKGIKANEERMK 399 (468)
T ss_dssp TSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHH
Confidence 99999999999999999999999999998887788999998889888889999999998887777799999999999999
Q ss_pred HhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCC
Q psy7883 404 KHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467 (607)
Q Consensus 404 ~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~ 467 (607)
++++.+++++|+|++++||+.|++++++|.++|++|+|++.+.+.|+++||+++|||.+|+++.
T Consensus 400 ~~l~~s~~l~t~La~~lgy~~a~~ia~~a~~~g~~l~e~~~~~~~ls~eel~~~ldp~~~~~~~ 463 (468)
T 3r6q_A 400 EYVEKSIGIITAINPHVGYETAAKLAREAYLTGESIRELCIKYGVLTEEQLNEILNPYEMIHPG 463 (468)
T ss_dssp HHHHTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCCSHHHHHHHTSSCHHHHHHHSCHHHHTSCC
T ss_pred HHHHcCCchHHhcchhhHHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHcCHHHhcCCC
Confidence 9999999999999999999999999999999999999999998999999999999999999974
No 4
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A
Probab=100.00 E-value=8.5e-107 Score=888.08 Aligned_cols=455 Identities=42% Similarity=0.678 Sum_probs=426.5
Q ss_pred ccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q psy7883 6 VRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVI 84 (607)
Q Consensus 6 ~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~ 84 (607)
+|+|+|++|+++||.|+|||.||+|++.||++|+.....++++|++|+.||+|+|++|+++| ||++++++|.++|++|.
T Consensus 23 ~r~e~d~~g~~~vp~~~~yG~qt~Ra~~nf~i~~~~~~~~~~~i~a~~~vk~A~A~an~~~G~l~~~~a~aI~~a~~ei~ 102 (478)
T 3ocf_A 23 TRREQDSLGERDIPMDAYFGIQTLRAVENFSLSDVALNHIPALVRALAMVKKAAATANYKLRQLPEPKYAAIVAACDDII 102 (478)
T ss_dssp CEEEEETTEEEEECTTCSSCHHHHHHHHHCCCSSCBGGGSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred cccccccCCCccCCcccccCHHHHHHHHhccccCCCCCCcHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999987433348999999999999999999999 99999999999999999
Q ss_pred cCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHH
Q psy7883 85 SGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRL 164 (607)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L 164 (607)
++++ +++|+++.+++++++++|||+||||++++++++|++.|+|.++|||+|||+||||||+++|+++|++|+.+. .|
T Consensus 103 ~g~~-~~~f~~~~~q~g~gt~~nmnvnevia~~a~e~~G~~~G~~~~vHpndhVn~g~SsNDv~~Ta~~L~~~~~l~-~L 180 (478)
T 3ocf_A 103 DGLL-MEQFVVDVFQGGAGTSSNMNANEVIANRALEHLGRPRGDYQTIHPNDDVNMSQSTNDVYPTAVRLALLLSQN-QV 180 (478)
T ss_dssp TTTT-GGGCCCBTTCSSTTHHHHHHHHHHHHHHHHHHTTCCTTCTTTSCCCCCCTTTCCHHHHHHHHHHHHHHHTHH-HH
T ss_pred cCcc-ccCCCcchhhccCCccccchHHHHHHHHHHHHhchhcCCCCccCCCCCCCCCCChhhHHHHHHHHHHHHHHH-HH
Confidence 8777 789999999999999999999999999999999988888866899999999999999999999999999875 69
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCc
Q psy7883 165 LCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYV 244 (607)
Q Consensus 165 ~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~ 244 (607)
.+.|..|+++|.++|++|+|++||||||+|+||||||||+|++|+++|.||++||.+++++++.+||||||+||++++++
T Consensus 181 ~~~L~~L~~~L~~kA~e~~d~v~~GRTHlQ~A~PiTlG~~~~~~a~~l~rd~~RL~~~~~~l~~~~lGgtAvGTg~~~~~ 260 (478)
T 3ocf_A 181 QTALHRLIAAFEAKGREFATVIKIGRTQLQDAVPITLGQEFEAFAATLREDTARLEEVAALFREVNLGGTAIGTRINASH 260 (478)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHGGGEECTTC-----------
T ss_pred HHHHHHHHHHHHHHHHHccCcEeecccccccceeecHHHHHHHHHHHHHHHHHHHHHHHHHHhHhCCCCeeeCCCcCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998999999999
Q ss_pred chhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCCC
Q psy7883 245 GFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSI 324 (607)
Q Consensus 245 ~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSSi 324 (607)
+|...+.++++++|||+..+.+|+++++++||++++++++|+.++++|+|||+||++|+|+||+|||||.+|+.++||||
T Consensus 261 ~~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp~~q~GSSi 340 (478)
T 3ocf_A 261 AYAEQAIVELSQISGIELKATGNLVEASWDTGAFVTFSGILRRIAVKLSKIANDLRLLSSGPRSGLGEIRLPAVQPGSSI 340 (478)
T ss_dssp CHHHHHHHHHHHHHTSCCEECSCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCBSSSSCCCEECCCCSCCBTT
T ss_pred hHHHHHHHHHHHhcCCCCccCCChhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeEEECCCCCCcCCC
Confidence 99999999999999999778999999999999999999999999999999999999999999999999999988999999
Q ss_pred CCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHH
Q psy7883 325 MPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAK 404 (607)
Q Consensus 325 MPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~ 404 (607)
|||||||+.+|.++++|++|+|+..++++.+.++++|++.++|.+.++++++++++.+++..++..|++||+||++||++
T Consensus 341 MP~K~NPv~~E~i~~~a~~V~G~~~~i~~a~~~g~leln~~~p~i~~~l~~s~~ll~~~~~~~~~~~v~gl~vn~erm~~ 420 (478)
T 3ocf_A 341 MPGKVNPVIPESVNQVCYQVIGNDLTVTMAAESGQLQLNAFEPLIVYNILSSMRLLGRAMTNLAERCVDGIEANVERCRA 420 (478)
T ss_dssp BTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHH
T ss_pred CCcccCcHHHHHHHHHHHHHHhHHHHHHHHHhcCcchhcccchhHHHHHHHHHHHHHHHHHHHHHHhhCCCEECHHHHHH
Confidence 99999999999999999999999999988888899999999998889999999999999999988899999999999999
Q ss_pred hhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccc
Q psy7883 405 HVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKM 463 (607)
Q Consensus 405 ~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~ 463 (607)
+++.+++++|+|++++||+.|++++++|.++|++|+|++.+.++ |++||+++|||.++
T Consensus 421 ~l~~s~~lvtaLa~~igy~~a~~ia~~A~~~g~~l~e~~~~~~~-s~eel~~~ldp~~m 478 (478)
T 3ocf_A 421 GAEESISLATALVPVVGYARAAEIAKQALASGQTVMEVAISKGL-DASALTIMLDPLRM 478 (478)
T ss_dssp HHHTCGGGGGGGHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTC-CCHHHHHHTCSCC-
T ss_pred HHHhCccHHHHhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHcCC-CHHHHHHhcCcccC
Confidence 99999999999999999999999999999999999999999986 99999999999763
No 5
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.2e-106 Score=888.40 Aligned_cols=463 Identities=63% Similarity=0.977 Sum_probs=442.7
Q ss_pred CCCCccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHH
Q psy7883 2 GKDGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAA 80 (607)
Q Consensus 2 ~~~~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al 80 (607)
.|+++|+|+|++|+++||.|+|||.||+|++.||++|+. +.|+++|++++.||+|+|++|.++| ||++.+++|.++|
T Consensus 32 ~m~~~r~e~d~~g~~~vp~~~~~g~qt~ra~~nf~i~~~--~~~~~~i~a~~~vk~AaA~an~~lG~l~~~~a~aI~~A~ 109 (495)
T 4hgv_A 32 TMTSTRTETDTFGPIEVASDRYWGAQAQRSLGNFKIGWE--KQPLAIVRALGIVKQAAARANMALGRLDPAIGDAIVKAA 109 (495)
T ss_dssp ---CEEEEEETTEEEEEETTCCCCHHHHHHHHHCCCCSC--BCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred CCCCCeeeecCCCCccCCCccchHHHHHHHHHccCCCCC--CCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 477899999999999999999999999999999999987 4789999999999999999999999 9999999999999
Q ss_pred HHHHcCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHH
Q psy7883 81 DEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEI 160 (607)
Q Consensus 81 ~~i~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l 160 (607)
++|.+|++ +++|+++++|+|+|++.|||+||||++++.+++|.+.|.+.++|||+|||+|+||||+++||++|++++++
T Consensus 110 ~ei~~g~~-~~~F~~d~~q~gsgt~~nmn~nevian~a~e~lg~~~g~~~~vhpnd~Vh~gqSsnDv~~TA~~l~~~~~~ 188 (495)
T 4hgv_A 110 QEVIDGKL-DEHFPLVVWQTGSGTQSNMNANEVVSNRAIELLGGVMGSKKPVHPNDHVNMSQSSNDTYPTAMHIACAERV 188 (495)
T ss_dssp HHHHTTSS-GGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCTTTTCSCCCCCCCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCch-hhccchhhhhhccccccCcchhHHHHHHHHHHcCcccCCCCCCCHHHhccCCCChhhHHHHHHHHHHHHHH
Confidence 99999988 88999999999999999999999999999999999899888999999999999999999999999999887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCC
Q psy7883 161 HNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGL 240 (607)
Q Consensus 161 ~~~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~ 240 (607)
.+.|.+.|..|+++|.++|++|++++|+||||+|+|+||||||+|++|+++|.||++||.+++++++.+++||+|+||+.
T Consensus 189 ~~~L~~~L~~L~~~L~~kA~~~~~~~~~GRTHlQ~A~P~TlG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGgtAvGtg~ 268 (495)
T 4hgv_A 189 IHDLLPALKHLHKALEEKVKAFDHIIKIGRTHTQDATPLTLGQEFSGYAAQVASSIKRIEMTLPGLCELAQGGTAVGTGL 268 (495)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHTHHHHTEECTTCTTTSSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCeeecccCCCCceeecHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhhcc
Confidence 77799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCC
Q psy7883 241 NTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEP 320 (607)
Q Consensus 241 ~~d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~ 320 (607)
+.++++...+.+++++.+||.+.+.+|+++|+++||++++++++|+.++++|+|||+||++|+|+|+.||+|+.+|++++
T Consensus 269 ~~~~~~~~~v~~~la~~~gl~f~~a~n~~~~~~~rD~~~e~~~~L~~la~~L~Kia~Dirll~S~~~~g~~Ei~~p~~q~ 348 (495)
T 4hgv_A 269 NAPVGFAEKVAEEIAAITGIGFTSAPNKFEALAAHDSMVFSHGAINATAAALFKIANDIRFLGSGPRSGLGELSLPENEP 348 (495)
T ss_dssp TSCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECCCCSC
T ss_pred cCchhHHHHHHHHHHHHhCCCccccCCHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEEecCcCCc
Confidence 99999999999999999999988889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHH
Q psy7883 321 GSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNED 400 (607)
Q Consensus 321 GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~e 400 (607)
||||||||+||+.+|.++++|+++.|+..++.+....+++|+|.+.+.+.|.++++++++.++++.++.+|++||+||++
T Consensus 349 GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~~~~e~n~~~~~~~~~ll~s~~~l~~~~~~~~~~~i~gl~vn~e 428 (495)
T 4hgv_A 349 GSSIMPGKVNPTQCEALTQVCVQVFGNHAALTFAGSQGHFELNVYNPLMAYNFLQSVQLLADAAISFTDNCVVGIEARED 428 (495)
T ss_dssp CC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHH
T ss_pred ccccCccccChHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCEECHH
Confidence 99999999999999999999999999999998888889999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCC
Q psy7883 401 TIAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467 (607)
Q Consensus 401 rm~~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~ 467 (607)
+|+++++.+++++|+|++++||+.|++++++|.++|++|+|++.+.+.||++||+++|||.+|+|++
T Consensus 429 rm~~~l~~s~~lvtaL~~~iGy~~A~~iak~A~~~g~~lre~~~~~~~ls~eeld~lldP~~~~gpA 495 (495)
T 4hgv_A 429 NIKAALDRSLMLVTALAPKIGYDNAAKIAKTAHKNGTTLREEAVGGGYVTDEEFDAVVRPETMIGPA 495 (495)
T ss_dssp HHHHHHHHCSGGGGGTHHHHCHHHHHHHHHHHHHHTCCHHHHHHTTTSSCHHHHHHHCCGGGSSSCC
T ss_pred HHHHHHhcChhHHHHhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHhCCHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999985
No 6
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A
Probab=100.00 E-value=6.1e-104 Score=867.10 Aligned_cols=461 Identities=58% Similarity=0.943 Sum_probs=436.7
Q ss_pred CCccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHH
Q psy7883 4 DGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADE 82 (607)
Q Consensus 4 ~~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~ 82 (607)
+.+|+|+|++|+++||.++|||.++.|++.||++|+.+ .+++++++|++||+|||+||+++| ||++++++|.++|++
T Consensus 2 ~~~r~e~d~~g~~~vp~~~~~g~~t~r~~~~f~~s~~~--~~~~~i~a~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~ 79 (467)
T 1fur_A 2 NTVRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEK--MPTSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADE 79 (467)
T ss_dssp --CEEEEETTEEEEECTTCCCCHHHHHHHHHCCCSSCB--CCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred CCcCccccCCCCccCCcccccchhhHHHHHhccCCCcc--CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 34899999999999999999999999999999999863 589999999999999999999999 999999999999999
Q ss_pred HHcCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHH
Q psy7883 83 VISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHN 162 (607)
Q Consensus 83 i~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~ 162 (607)
|.++.+ +++|+++++++++++++|||+|+||++++++++|++.|+|.++|||+|||+||||||+++|+++|++|+.+..
T Consensus 80 i~~~~~-~~~f~~~~~q~g~~~~~~mn~~~via~~a~e~~G~~~g~~~~lHp~~~Vn~g~SsnD~~~Ta~~L~lr~~l~~ 158 (467)
T 1fur_A 80 VLAGQH-DDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRK 158 (467)
T ss_dssp HHTTTT-GGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCSSTTCSSCCCCCCTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccc-cccccchhhhccccccccccHHHHHHHHHHHHhCcccccccccCchhhcccCCChhhHHHHHHHHHHHHHHHH
Confidence 988766 7789999999999999999999999999899999888887568999999999999999999999999998653
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCC
Q psy7883 163 RLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNT 242 (607)
Q Consensus 163 ~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~ 242 (607)
.|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++++++.+||||||+||++++
T Consensus 159 ~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGgtAvGT~~~~ 238 (467)
T 1fur_A 159 QLIPQLKTLTQTLNEKSRAFADIVKIGRTNLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGTGLNT 238 (467)
T ss_dssp THHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTEECTTCTTTSSCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcEeeccccCccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCcchhcCCccC
Confidence 39999999999999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred CcchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCC
Q psy7883 243 YVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGS 322 (607)
Q Consensus 243 d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GS 322 (607)
+++|+.++.+.+|++|||+..+.+|++||+++||++++++++++.++++|+|||+||++|+|+||+|||||.+|++++||
T Consensus 239 ~~~~~~~v~~~la~~LGl~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~~r~~~gei~lp~~~~GS 318 (467)
T 1fur_A 239 HPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGS 318 (467)
T ss_dssp CTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCSEECCCCSCCC
T ss_pred ChhHHHHHHHHHHHHhCCCCccCCCHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCceeEECCCCCCCC
Confidence 99999999999999999997789999999999999999999999999999999999999999999999999999989999
Q ss_pred CCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHH
Q psy7883 323 SIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTI 402 (607)
Q Consensus 323 SiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm 402 (607)
|||||||||+.+|.|+++|+++.|+..+++.....+++|++.+.|.+.+.++++++++.+++..+..+|++||+||+++|
T Consensus 319 SiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~g~~e~~~~~~~~~~~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm 398 (467)
T 1fur_A 319 SIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERI 398 (467)
T ss_dssp TTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHccCeeCHHHH
Confidence 99999999999999999999999999999887777899999999988899999999999998888788999999999999
Q ss_pred HHhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCC
Q psy7883 403 AKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467 (607)
Q Consensus 403 ~~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~ 467 (607)
+++++.+++++|+|++++||+.|++++++|.++|++++|++.+.+.|++++++++|||.+|+|+.
T Consensus 399 ~~~l~~~~~l~t~La~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~e~~~~ldp~~~~~~~ 463 (467)
T 1fur_A 399 NQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEFDSWVRPEQMVGSM 463 (467)
T ss_dssp HHHHHHCSTTHHHHHTTSCHHHHHHHHHHHHHHTCCHHHHHHHTTSSCHHHHHHHCCGGGC----
T ss_pred HHHHHhCccHHHHhHhhccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHHHhcCHHHHhCcc
Confidence 99999999999999999999999999999999999999999999989999999999999999965
No 7
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A
Probab=100.00 E-value=2.5e-104 Score=871.85 Aligned_cols=454 Identities=50% Similarity=0.777 Sum_probs=425.0
Q ss_pred CCccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHH
Q psy7883 4 DGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADE 82 (607)
Q Consensus 4 ~~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~ 82 (607)
+.+|+|+|++|+++||.++|||.+|.|+++||++|+. +.++++|++|+.||+|+|+||+++| ||++++++|.++|++
T Consensus 30 ~~~r~e~d~~g~~~vp~~~~~G~~t~r~~~~F~is~~--~~~~~~I~a~~~vk~A~A~a~~~~Gil~~~~a~aI~~a~~e 107 (495)
T 4adm_A 30 ANYRIEHDTMGEVRVPAKALWRAQTQRAVENFPISGR--GLERTQIRALGLLKGACAQVNSDLGLLAPEKADAIIAAAAE 107 (495)
T ss_dssp -CEEEEEETTEEEEEETTCSCCHHHHHHHHHCCSSSC--BCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred cccCCccCcCCCccCChhhhcCchhHHHHHhcCCCCC--CCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 3579999999999999999999999999999999986 4789999999999999999999999 999999999999999
Q ss_pred HHcCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHH
Q psy7883 83 VISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHN 162 (607)
Q Consensus 83 i~~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~ 162 (607)
|.++.+ +++|+++++++++++++|||+|+||.++. ++| |+| +|||+|||+||||||+++|+++|++|+++.+
T Consensus 108 i~~~~~-~~~f~~~~~q~g~gt~~nmnvnevia~ra--~lG---G~~--vH~~dhVn~g~SsNDv~~Ta~~L~lr~~l~~ 179 (495)
T 4adm_A 108 IADGQH-DDQFPIDVFQTGSGTSSNMNTNEVIASIA--AKG---GVT--LHPNDDVNMSQSSNDTFPTATHIAATEAAVA 179 (495)
T ss_dssp HHTTSC-GGGCCCBSSSCTTCHHHHHHHHHHHHHHH--HHT---TCC--CCTTTTTTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCcc-cCCCCcchhhccccccccccHHHHHHHHH--HhC---CCc--cCcccccCCCCChhhHHHHHHHHHHHHHHHH
Confidence 998766 78999999999999999999999998865 566 666 7999999999999999999999999998755
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCC
Q psy7883 163 RLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNT 242 (607)
Q Consensus 163 ~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~ 242 (607)
.|.+.|..|+++|.++|++|+|++||||||+|+||||||||||++|+++|.||++||.+++++++.+||||||+||++++
T Consensus 180 ~l~~~L~~L~~~L~~kA~e~~d~v~~GrTHlQ~A~PiT~G~~~~~~a~~l~rd~~RL~~~~~~l~~~~LGgtAvGT~~~~ 259 (495)
T 4adm_A 180 HLIPALQQLHDALAAKALDWHTVVKSGRTHLMDAVPVTLGQEFSGYARQIEAGIERVRACLPRLGELAIGGTAVGTGLNA 259 (495)
T ss_dssp THHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTEECTTCTTTSSCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHccCCeeeccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCccC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred CcchhHHHHHHHHHHhCC-CCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCC
Q psy7883 243 YVGFAENCTQRISELTGL-PFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPG 321 (607)
Q Consensus 243 d~~~~~~v~~~la~~LGl-~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~G 321 (607)
+++|+..+.++++++||| +..+.+|+++|+++||++++++++|+.++++|+|||+||++|+||||+|||||.+|+.++|
T Consensus 260 ~~~~~~~v~~~la~~lG~~~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsSgpr~e~gei~lp~~q~G 339 (495)
T 4adm_A 260 PDDFGVRVVAVLVAQTGLSELRTAANSFEAQAARDGLVEASGALRTIAVSLTKIANDIRWMGSGPLTGLAEIQLPDLQPG 339 (495)
T ss_dssp CTTHHHHHHHHHHHHHCCTTCEECSCTTHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCBSTTSCCCEECCCC---
T ss_pred ChhHHHHHHHHHHHHhCCCCCccccchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceEECCCCCCC
Confidence 999999999999999999 6668999999999999999999999999999999999999999999999999999998999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHH
Q psy7883 322 SSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDT 401 (607)
Q Consensus 322 SSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~er 401 (607)
||||||||||+.+|.++++|++|+|+..++++.+.+++++++.++|.+.++++++++++.+++..++..|++||+||++|
T Consensus 340 SSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~p~i~~~l~~s~~~l~~~l~~~~~~~l~gl~vn~er 419 (495)
T 4adm_A 340 SSIMPGKVNPVLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRCIAGLTANVEH 419 (495)
T ss_dssp ------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHH
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHcChHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHH
Confidence 99999999999999999999999999999988888899999999998889999999999999988878999999999999
Q ss_pred HHHhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCC----CCHHHHhhhcCcccccCCC
Q psy7883 402 IAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGY----LTEQEYDQWVKPEKMLGPE 467 (607)
Q Consensus 402 m~~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~----Ls~eel~~lldP~~~vg~~ 467 (607)
|+++++.+++++|+|++++||+.|+++|++|.++|++|+|++.+.+. |+++||+++|||.+|+|++
T Consensus 420 m~~~l~~s~~l~t~La~~igy~~a~~ia~~a~~~g~~l~e~~~~~~~~~~~ls~eel~~~ldp~~~~~~~ 489 (495)
T 4adm_A 420 LRRLAESSPSIVTPLNSAIGYEEAAAVAKQALKERKTIRQTVIDRGLIGDRLSIEDLDRRLDVLAMAKAE 489 (495)
T ss_dssp HHHHHHHCGGGGGGGHHHHCHHHHHHHHHHHHHHTCCHHHHHHHTTCCBTTBCHHHHHHHTCHHHHTTCC
T ss_pred HHHHHhccccHHHHhhhhhhHHHHHHHHHHHHHhCCCHHHHHHhCcccccCCCHHHHHHHcCHHHhcCCc
Confidence 99999999999999999999999999999999999999999998876 9999999999999999975
No 8
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1
Probab=100.00 E-value=7.1e-104 Score=868.37 Aligned_cols=458 Identities=65% Similarity=1.006 Sum_probs=431.4
Q ss_pred ccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q psy7883 6 VRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVI 84 (607)
Q Consensus 6 ~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~ 84 (607)
+|+|+|++|+++||.++|||.++.|++.||++|+..++.+++++++|++||+|||+||+++| ||++++++|.++|++|.
T Consensus 28 ~r~e~d~~g~~~vp~~~~~g~~t~r~~~~f~~s~~~~~~~~~~i~a~~~v~~A~A~a~~~~Gil~~~~a~aI~~a~~ei~ 107 (488)
T 1yfm_A 28 FRTETDAFGEIHVPADKYWGAQTQRSFQNFKIGGARERMPLPLVHAFGVLKKSAAIVNESLGGLDPKISKAIQQAADEVA 107 (488)
T ss_dssp EEEECSSSCCEEEESSCCCCHHHHHHHTTCCTTGGGGBCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred cCcccccCCCcCCCccchhchHHHHHHHhccCCCCcccCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999986334689999999999999999999999 99999999999999999
Q ss_pred cCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCC-CCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHH
Q psy7883 85 SGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLG-SKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNR 163 (607)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g-~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~ 163 (607)
++++ .++|+++.+|+++++++|||+|+||++++.|++|++.| ++ +|||+|||+||||||+++|+++|++|+.+.+.
T Consensus 108 ~~~~-~~~f~~~~~q~g~~t~~nmn~~evia~~a~e~lG~~~g~~~--vHp~d~Vn~g~SsNDv~~Ta~~L~lr~~l~~~ 184 (488)
T 1yfm_A 108 SGKL-DDHFPLVVFQTGSGTQSNMNANEVISNRAIEILGGKIGSKQ--VHPNNHCNQSQSSNDTFPTVMHIAASLQIQNE 184 (488)
T ss_dssp HTSS-GGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHC-----------CCCCCCCTTTCCHHHHHHHHHHHHHHHHHHTT
T ss_pred hccc-ccCCCcchhhccccccccccHHHHHHHHHHHHhCccccCCc--cCcccCcCCCCChhhHHHHHHHHHHHHHHHHH
Confidence 8776 77899999999999999999999999998898987777 54 79999999999999999999999999987525
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCC
Q psy7883 164 LLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTY 243 (607)
Q Consensus 164 L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d 243 (607)
|.+.|..|+++|.++|++|+|++||||||+|+||||||||+|++|+++|.||++||.+++++++.+||||||+||+++++
T Consensus 185 l~~~L~~L~~~L~~~A~e~~~~v~~GrTHlQ~A~PiT~G~~~~~~~~~l~rd~~RL~~~~~~l~~~~lGgtAvGT~~~~~ 264 (488)
T 1yfm_A 185 LIPELTNLKNALEAKSKEFDHIVKIGRTHLQDATPLTLGQEFSGYVQQVENGIQRVAHSLKTLSFLAQGGTAVGTGLNTK 264 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTEECTTCTTTSSCTTSC
T ss_pred HHHHHHHHHHHHHHHHHHhcCcEeeceecCccceEeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999899999999
Q ss_pred cchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCC
Q psy7883 244 VGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSS 323 (607)
Q Consensus 244 ~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSS 323 (607)
++|..++.+++|++|||+..+.+|+++++++||++++++++|+.++++|+|||+||++|+|+||+|||||.+|++++|||
T Consensus 265 ~~~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsS~pr~g~gei~lp~~~~GSS 344 (488)
T 1yfm_A 265 PGFDVKIAEQISKETGLKFQTAPNRFEALAAHDAIVECSGALNTLACSLFKIAQDIRYLGSGPRCGYHELMLPENEPGSS 344 (488)
T ss_dssp TTHHHHHHHHHHHHHSSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECCCCSCCCT
T ss_pred hhHHHHHHHHHHHHhCCCCccCccHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCceeEECCCCCCcCC
Confidence 99999999999999999977899999999999999999999999999999999999999999999999999999899999
Q ss_pred CCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHH
Q psy7883 324 IMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIA 403 (607)
Q Consensus 324 iMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~ 403 (607)
||||||||+.+|.++++|++++|+..+++..+..+++|++.++|.+.+++++++.++.+++..+..+|++||+||+++|+
T Consensus 345 iMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~p~~~~~l~~s~~~l~~~l~~~~~~~i~gl~vn~erm~ 424 (488)
T 1yfm_A 345 IMPGKVNPTQNEALTQVCVQVMGNNAAITFAGSQGQFELNVFKPVMIANLLNSIRLITDAAYSFRVHCVEGIKANEPRIH 424 (488)
T ss_dssp TSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCBTTBCSCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHH
T ss_pred CcccccCcHHHHHHHHHHHHHHhHHHHHHHHHhcccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHH
Confidence 99999999999999999999999999998877788999999999888999999999999988887789999999999999
Q ss_pred HhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCC
Q psy7883 404 KHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGP 466 (607)
Q Consensus 404 ~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~ 466 (607)
++++.+++++|+|++++||+.|++++++|.++|++++|++.+.+.|+++|++++|||..|+|+
T Consensus 425 ~~l~~s~~l~t~La~~lg~~~a~~i~~~a~~~g~~l~e~~~~~~~l~~eel~~~ldp~~~~~~ 487 (488)
T 1yfm_A 425 ELLTKSLMLVTALNPKIGYDAASKVAKNAHKKGITLKESALELGVLTEKEFDEWVVPEHMLGP 487 (488)
T ss_dssp HHHHHCSGGGTTTGGGTCHHHHHHHHHHHHHHTCCHHHHHHHTTSCCHHHHHHHCCGGGCC--
T ss_pred HHHccCchHHHHHHHhccHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHhcCHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999985
No 9
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1
Probab=100.00 E-value=3.6e-103 Score=863.68 Aligned_cols=458 Identities=40% Similarity=0.671 Sum_probs=431.5
Q ss_pred ccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCC--hHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHH
Q psy7883 6 VRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERM--PEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADE 82 (607)
Q Consensus 6 ~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~--~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~ 82 (607)
+|+|+|++|+++||.|+|||.++.|++.||++|+.. . +++++++|++||+|||+||+++| ||++++++|.++|++
T Consensus 5 ~r~e~d~~g~~~vp~~~~~g~~t~r~~~~f~~s~~~--~~~~~~~i~~~~~ve~A~a~a~~~~Gii~~~~a~~I~~a~~~ 82 (478)
T 1jsw_A 5 IRIEEDLLGTREVPADAYYGVHTLRAIENFYISNNK--ISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDE 82 (478)
T ss_dssp EEEEECSSCEEEEESSCCCCHHHHHHHHHCCSCSCC--SCCTTSHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred cCcccccCCCcCCCCccccchHHHHHHHhCCCcCcc--ccCcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999753 4 89999999999999999999999 999999999999999
Q ss_pred HH-cCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHH
Q psy7883 83 VI-SGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIH 161 (607)
Q Consensus 83 i~-~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~ 161 (607)
|. +++. .++|+++++++++++++|||+|+||++++++++|++.|++.++|||+|||+|||||||++|+++|++|+.+
T Consensus 83 i~~~~~~-~~~f~v~~~~~g~~~~~~mnv~~vIa~~~~e~~g~~~g~~~~lHpnd~Vn~g~SsnDv~~Ta~~L~lr~~l- 160 (478)
T 1jsw_A 83 VLNNGKC-MDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSL- 160 (478)
T ss_dssp HSTTTCS-TTCCCCCSSCCSTTHHHHHHHHHHHHHHHHHTTTSCCTTSCSSCCCCCCSCSCCHHHHHHHHHHHHHHHHH-
T ss_pred HHhcchh-ccCCccchhhccCcccccccHHHHHHHHHHHHcCccccccccccccccccCCCChhhHHHHHHHHHHHHHH-
Confidence 98 8765 77899999999999999999999999999999997778745689999999999999999999999999987
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCC
Q psy7883 162 NRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLN 241 (607)
Q Consensus 162 ~~L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~ 241 (607)
+.|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++++++.+||||||+||+++
T Consensus 161 ~~l~~~L~~L~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~rd~~RL~~~~~~~~~~~lGg~AvGT~~~ 240 (478)
T 1jsw_A 161 IKLVDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNIQRTAELLLEVNLGATAIGTGLN 240 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGCEEECCGGGSCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHTTEECCSCCSSSSCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCeeeccccCccceeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccCCcc
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred CCcchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCC
Q psy7883 242 TYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPG 321 (607)
Q Consensus 242 ~d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~G 321 (607)
++++++.++.+++|+.|||+..+.+|++|++++||++++++++|+.++++|+|||+||++|+|+||+|||||.+|++++|
T Consensus 241 ~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gei~lp~~~~G 320 (478)
T 1jsw_A 241 TPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAG 320 (478)
T ss_dssp CTTTHHHHHHHHHHHHHCCCCEECSCSSSBTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTTSCCCEECCCCSCC
T ss_pred CCcchHHHHHHHHHHHcCCCCCcCCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCceeEECCCCCCC
Confidence 99999999999999999999778999999999999999999999999999999999999999999999999999998999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHH
Q psy7883 322 SSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDT 401 (607)
Q Consensus 322 SSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~er 401 (607)
||||||||||+.+|+++++|+++.|++.+++.....+++|++.+.|.+.+++++++..+.+++..+..+|++||+||++|
T Consensus 321 SSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~p~~~~~l~~s~~~l~~~l~~~~~~~l~gl~vn~er 400 (478)
T 1jsw_A 321 SSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCINGITANKEV 400 (478)
T ss_dssp CSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHH
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHhHHHHHHHHHhccchhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHccCeecHHH
Confidence 99999999999999999999999999999987777789999988888889999999999988877766899999999999
Q ss_pred HHHhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCC
Q psy7883 402 IAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467 (607)
Q Consensus 402 m~~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~ 467 (607)
|+++++.+++++|+|++++||+.|++++++|.++|++++|++.+.+.|++++++++|||.+|+|+.
T Consensus 401 m~~~l~~~~~l~t~La~~lg~~~a~~~v~~a~~~g~~l~e~~~~~~~l~~~~~~~~ldp~~~~~~~ 466 (478)
T 1jsw_A 401 CEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTEAELDDIFSVQNLMHPA 466 (478)
T ss_dssp HHHHHTTCTTCGGGTHHHHCHHHHHHHHHHHHTTCCCHHHHHHHHTSSCSHHHHTSCCC-------
T ss_pred HHHHHHhCchHHHHHHHhhhHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHhCCHHHHhCCC
Confidence 999999999999999999999999999999999999999999988889999999999999999975
No 10
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1
Probab=100.00 E-value=1.1e-102 Score=857.34 Aligned_cols=459 Identities=57% Similarity=0.860 Sum_probs=433.1
Q ss_pred ccccccCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q psy7883 6 VRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVI 84 (607)
Q Consensus 6 ~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~ 84 (607)
+|+|+|++|+++||.++|||.++.|++.||++|+.....+++++++|++||+|||+||+++| ||++++++|.++|++|.
T Consensus 3 ~r~e~d~~g~~~vp~~~~~g~~t~~~~~~f~~s~~~~~~~~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~ 82 (466)
T 1vdk_A 3 YRIERDTMGEVRVPADKYWGAQTQRSLENFRIGTDRFRMPLEIIRAYGMLKKAAARANLELGELPEEIAKAIIQAAEEVV 82 (466)
T ss_dssp -CEEEETTEEEECCTTCCCCHHHHHHHHHCCSSTTTCBCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCcCCCcccccchhhHHHHHhccCCCccccCcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999976312289999999999999999999999 99999999999999998
Q ss_pred cCccccCCccccccccCCCcccccchhHHHHHHHHHHhccCCC-CCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHH
Q psy7883 85 SGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLG-SKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNR 163 (607)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g-~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~ 163 (607)
++.+ +++|+++.++.+.++++|||+|+||+++++|++|++.| ++ +||++|||+||||||+++|+++|++|+.+.+.
T Consensus 83 ~~~~-~~~f~~~~~q~~~~~~~~mn~~~via~~a~e~~g~~~g~~~--lHp~~~Vn~g~SsnD~~~Ta~~L~lr~~l~~~ 159 (466)
T 1vdk_A 83 QGKW-DDHFPLVVFQTGSGTQTNMNVNEVIANRASEILGKPLGSKY--AHPNDHVNRGQSSNDTFPTAMYVAVALALHQR 159 (466)
T ss_dssp TTTT-GGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCTTSCS--SCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred hccc-ccCCCchhhhccccccccccHHHHHHHHHHHHhCccccccc--cccccCcCCCCChhhHHHHHHHHHHHHHHHHH
Confidence 8766 67899999999999999999999999998899997777 54 79999999999999999999999999987536
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCC
Q psy7883 164 LLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTY 243 (607)
Q Consensus 164 L~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d 243 (607)
|.+.|..|+++|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++++++.+||||||+||+++++
T Consensus 160 l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~ 239 (466)
T 1vdk_A 160 LYPAVEGLIRTFTAKAQAFDQIVKVGRTHLMDAVPITLGQEIGSWAAQLKTTLAAVKEMEKGLYNLAIGGTAVGTGLNAH 239 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHGGGGEECTTCTTTSSCTTSC
T ss_pred HHHHHHHHHHHHHHHHHHccCCeeeccccCccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred cchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCC
Q psy7883 244 VGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSS 323 (607)
Q Consensus 244 ~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSS 323 (607)
++|..++.+++|++|||+..+.+|++|++++||++++++++++.++++|+|||+||++|+|+||+|||||.+|++++|||
T Consensus 240 ~~~~~~v~~~la~~LG~~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~~r~~~gei~lp~~~~GSS 319 (466)
T 1vdk_A 240 PRFGELVAKYLAEETGLPFRVAENRFAALAAHDELVNVMGAIRTLAGALMKIGNDVRWLASGPYAGIGEITIPANEPGSS 319 (466)
T ss_dssp TTHHHHHHHHHHHHHSSCCEECSCTTHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCBSSSSCCSEECCCCSCCSS
T ss_pred chHHHHHHHHHHHHcCCCCCCCcchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceeEECCCCCCcCC
Confidence 99999999999999999976799999999999999999999999999999999999999999999999999999899999
Q ss_pred CCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHH
Q psy7883 324 IMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIA 403 (607)
Q Consensus 324 iMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~ 403 (607)
||||||||+.+|.++++|+++.|+..+++.....++++++.++|.+.+++++++..+.+++..+..+|++||+||+++|+
T Consensus 320 iMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~g~~e~~~~~~~~~~~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~ 399 (466)
T 1vdk_A 320 IMPGKVNPTQVEALTMVVVRVYGNDHTVAFAGSQGNFQLNVYKPVMAYSTLESINLLADAVASFDAHLAQGIEPNLERIE 399 (466)
T ss_dssp CCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCBTTBCSCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCEEcHHHHH
Confidence 99999999999999999999999999998877778999998888888889999999998887776789999999999999
Q ss_pred HhhhhhHhHHHhhCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCC
Q psy7883 404 KHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467 (607)
Q Consensus 404 ~~l~~~~~lat~La~~ig~~~Ah~ia~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~ 467 (607)
++++.+++++|+|++++||+.+++++++|.++|++++|++.+.+.|+++|++++|||.+|+|+.
T Consensus 400 ~~l~~~~~l~t~La~~lg~~~a~~~v~~a~~~g~~l~e~~~~~~~l~~~~~~~~ldp~~~~~~~ 463 (466)
T 1vdk_A 400 EYLQKNPMLATALNKAIGYDKAAEIVKKALKEKKTLKQAALELGYLTEEEFDRIVVPMRLAKPH 463 (466)
T ss_dssp HHHTTCGGGGHHHHHHHCSHHHHTTTTTSCC--CCHHHHHHHTSSSCHHHHHHHCCHHHHHCCC
T ss_pred HHHHhcchHHHHHHHhccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHHHHcCHHHhcCCC
Confidence 9999999999999999999999999999999999999999998889999999999999999975
No 11
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1
Probab=100.00 E-value=1e-80 Score=682.30 Aligned_cols=417 Identities=21% Similarity=0.246 Sum_probs=352.5
Q ss_pred CCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCccccc
Q psy7883 19 PNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSI 97 (607)
Q Consensus 19 P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~ 97 (607)
|.+.+|+...|+.+| ++++++++|++||+|||+||.++| ||++++++|.++|++|.. ++ ..+.
T Consensus 7 ~~~~ry~~~~~~~~~----------sd~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~-~~-----~~~~ 70 (454)
T 1q5n_A 7 LYASLFYQRDVTEIF----------SDRALVSYMVEAEVALAQAQAQVGVIPQSAATVIQRAAKTAID-KI-----DFDA 70 (454)
T ss_dssp TTHHHHSCHHHHHHT----------SHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTHHH-HC-----CHHH
T ss_pred ccccccCcHHHHHHc----------CcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHhhh-cC-----CHHH
Confidence 566699999999999 899999999999999999999999 999999999999987642 33 3333
Q ss_pred cccCCCcccccchhHHHHH--HHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 98 WQTGSGTQTNMNVNEVISN--RAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDAL 175 (607)
Q Consensus 98 ~~~~~~~di~~~vnevIe~--~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L 175 (607)
++.+.++ +.|+|+++ .+++++|...| .++.|||+|||||||++|+++|++|+.+. .|.+.|..|+++|
T Consensus 71 ~~~~~~~----~~~dVia~~~~l~e~~g~~~g-----~~~~~vH~g~SsnD~~~Ta~~L~~r~~l~-~l~~~l~~L~~~L 140 (454)
T 1q5n_A 71 LATATGL----AGNIAIPFVKQLTAIVKDADE-----DAARYVHWGATSQDILDTACILQCRDALA-IVQNQVQQCYETA 140 (454)
T ss_dssp HHHHHHH----HSSSHHHHHHHHHHHHHTTCT-----TGGGGTTTTCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred HHHHhhc----cCCcHHHHHHHHHHHhccccC-----CccccccCCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 3332222 34555555 55788852211 12457889999999999999999999875 6999999999999
Q ss_pred HHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHHH
Q psy7883 176 DKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRIS 255 (607)
Q Consensus 176 ~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~la 255 (607)
.++|++|+|++||||||+||||||||||||++|+++|.||++||.+++++++.+|||| |+||+.+..+ +++.++++++
T Consensus 141 ~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-AvGT~~~~~~-~~~~~~~~~a 218 (454)
T 1q5n_A 141 LSQAQTYRHQVMMGRTWLQQALPITLGHKLARWASAFKRDLDRINAIKARVLVAQLGG-AVGSLASLQD-QGSIVVEAYA 218 (454)
T ss_dssp HHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHSBCCCCC-TTSSCGGGTT-CHHHHHHHHH
T ss_pred HHHHHHhcCceeeccccCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-HhhcCccccc-ccHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 5799988755 8889999999
Q ss_pred HHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCC--CCCCCCCCCCCCChhH
Q psy7883 256 ELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPTQ 333 (607)
Q Consensus 256 ~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~~ 333 (607)
+.|||+.++.+ ++.+||++++++++++.++++|+|||+||++|++ +||||+.+|. +++|||||||||||+.
T Consensus 219 ~~LG~~~~~~~----~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~~---~e~gEl~~p~~~~q~GSSiMP~K~NP~~ 291 (454)
T 1q5n_A 219 KQLKLGQTACT----WHGERDRIVEIASVLGIITGNVGKMARDWSLMMQ---TEIAEVFEPTAKGRGGSSTMPHKRNPVA 291 (454)
T ss_dssp HHHTCBCCSSC----CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---TTTCCEECCC-------------CCCHH
T ss_pred HHhCcCCCCCC----CccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccchhccccccCCCCCccCCCCCCCHH
Confidence 99999985544 4679999999999999999999999999999995 7999999996 6899999999999999
Q ss_pred HHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhHH
Q psy7883 334 VEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLV 413 (607)
Q Consensus 334 ~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~la 413 (607)
+|.++++|++++|++.+++. +.+++||+|.+.+.+.+.++++...+.+.++.++.+|++||+||++||+++++.+.+++
T Consensus 292 ~E~i~~~a~~v~g~~~~~~~-~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~s~~~~ 370 (454)
T 1q5n_A 292 AASVLAAANRVPALMSSIYQ-SMVQEHERSLGAWHAEWLSLPEIFQLTAGALERTLDVLKGMEVNAENMHQNIECTHGLI 370 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TTCCCTTSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHTTTTGG
T ss_pred HHHHHHHHHHHHHHHHHHHH-hccchhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHHhCcChh
Confidence 99999999999999988764 46789999988887777788777777778888899999999999999999998665543
Q ss_pred ------HhhCCCCCHHHHHHHH----HHHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCCcc
Q psy7883 414 ------TALNPHIGYDKAAEIA----KHAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYHPY 471 (607)
Q Consensus 414 ------t~La~~ig~~~Ah~ia----~~A~~~g~~l~e~l~~~----~~Ls~eel~~lldP~~~vg~~~~~~ 471 (607)
+.|.+++||++||+++ ++|.++|++|+|++.+. +.|++++++++|||.+|+|++++.+
T Consensus 371 ~ae~l~~~L~~~ig~~~A~~iv~~~~~~a~~~g~~l~e~~~~~~~~~~~l~~~~l~~~ldp~~~~g~a~~~v 442 (454)
T 1q5n_A 371 MAEAVMMALAPHMGRLNAHHVVEAACKTAVAEQKHLKDIISQVDEVKQYFNPSQLDEIFKPESYLGNIQDQI 442 (454)
T ss_dssp GHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTCCHHHHHTTCHHHHTTCCHHHHHHHTCGGGGCTTHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCCHHHHHhcchhhhcCCCHHHHHHhCCHHHHcCcHHHHH
Confidence 5677779999999976 67788999999999876 7899999999999999999876543
No 12
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1
Probab=100.00 E-value=1.1e-80 Score=681.31 Aligned_cols=415 Identities=22% Similarity=0.247 Sum_probs=354.6
Q ss_pred cCCCCCCch-HhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCccc
Q psy7883 18 VPNDKYYGA-QTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPL 95 (607)
Q Consensus 18 ~P~~~~yg~-~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~ 95 (607)
.|++ +|+. ++|+++| ++++++++|++||+|||++|.++| ||++++++|.++|++ ++ |++
T Consensus 4 ~~~~-ry~~~~~~~~i~----------s~~~~i~~~~~v~~A~a~a~~~~G~i~~~~a~~I~~a~~~---~~-----f~~ 64 (450)
T 1re5_A 4 QLFD-AYFTAPAMREIF----------SDRGRLQGMLDFEAALARAEASAGLVPHSAVAAIEAACQA---ER-----YDT 64 (450)
T ss_dssp CTTH-HHHSCHHHHHHT----------SHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHCCG---GG-----SCH
T ss_pred cchh-hccCCHHHHHHc----------CcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhc---CC-----CCH
Confidence 3666 8887 9999999 899999999999999999999999 999999999999853 11 333
Q ss_pred cccccCCCcccccchhHHHHH--HHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 96 SIWQTGSGTQTNMNVNEVISN--RAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHD 173 (607)
Q Consensus 96 ~~~~~~~~~di~~~vnevIe~--~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~ 173 (607)
+.++.+.++ +.|+|+++ .+++++|... . .+++|||+||||||+++|+++|++|+.+. .|.+.|..|++
T Consensus 65 ~~~~~~~~~----~~~dV~a~~~~l~e~~g~~~-~----~~~~~vh~g~SsnD~~~Ta~~l~lr~~l~-~l~~~l~~L~~ 134 (450)
T 1re5_A 65 GALANAIAT----AGNSAIPLVKALGKVIATGV-P----EAERYVHLGATSQDAMDTGLVLQLRDALD-LIEADLGKLAD 134 (450)
T ss_dssp HHHHHHHHH----HSSSHHHHHHHHHHHHHHHC-G----GGGGGTTTTCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHhc----cCccHHHHHHHHHHHhCCCC-C----cccccccCCCChhhhHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 333332222 23444544 4568887310 0 13678999999999999999999999875 69999999999
Q ss_pred HHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHH
Q psy7883 174 ALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQR 253 (607)
Q Consensus 174 ~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~ 253 (607)
+|.++|++|+|++||||||+|+||||||||||++|+++|.||++||.+++++++.+|||| |+||+.+++++ +.++.++
T Consensus 135 ~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGG-AvGt~~~~~~~-~~~~~~~ 212 (450)
T 1re5_A 135 TLSQQALKHADTPLVGRTWLQHATPVTLGMKLAGVLGALTRHRQRLQELRPRLLVLQFGG-ASGSLAALGSK-AMPVAEA 212 (450)
T ss_dssp HHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHSBCCCCC-TTSSCGGGGGG-HHHHHHH
T ss_pred HHHHHHHHccCCeeeccccCccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcc-hhcCCcccCcc-hHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998 68999999887 8889999
Q ss_pred HHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCC--CCCCCCCCCCCCCh
Q psy7883 254 ISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNP 331 (607)
Q Consensus 254 la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP 331 (607)
+++.|||+.++.+ |+++||++++++++++.++++|+|||+||++|++ +||||+.+|. +++|||||||||||
T Consensus 213 la~~LG~~~~~~~----~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~~---~e~~El~~p~~~~q~GSSiMP~K~NP 285 (450)
T 1re5_A 213 LAEQLKLTLPEQP----WHTQRDRLVEFASVLGLVAGSLGKFGRDISLLMQ---TEAGEVFEPSAPGKGGSSTMPHKRNP 285 (450)
T ss_dssp HHHHHTCBCCSSC----CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---TTTCCEECCCCC----------CCCC
T ss_pred HHHHhCcCCCCcc----cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCcceeecccccCCCccccCCCCcCC
Confidence 9999999975433 6999999999999999999999999999999995 7999999996 58999999999999
Q ss_pred hHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHh
Q psy7883 332 TQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLM 411 (607)
Q Consensus 332 ~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~ 411 (607)
+.+|.++++|+++.|+..+++.+ .+.+||+|.+.|.+.+.+++++..+.++++.++.+|++||+||+++|+++++.+++
T Consensus 286 ~~~E~i~~~a~~v~g~~~~~~~~-~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~s~~ 364 (450)
T 1re5_A 286 VGAAVLIGAATRVPGLLSTLFAA-MPQEHERSLGLWHAEWETLPDICCLVSGALRQAQVIAEGMEVDAARMRRNLDLTQG 364 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-CCCCTTBCSSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-ChhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHHHhCcC
Confidence 99999999999999999888754 45699999998888889999999999999999999999999999999999986666
Q ss_pred HH------HhhCCCCCHHHHHHHH----HHHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCCcc
Q psy7883 412 LV------TALNPHIGYDKAAEIA----KHAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYHPY 471 (607)
Q Consensus 412 la------t~La~~ig~~~Ah~ia----~~A~~~g~~l~e~l~~~----~~Ls~eel~~lldP~~~vg~~~~~~ 471 (607)
++ +.|.+++||++||+++ ++|.++|++|+|++.+. +.|+++|++++|||.+|+|+++.++
T Consensus 365 ~~~Ae~l~~~L~~gig~~~A~~~v~~~~~~a~~~g~~l~e~~~~~~~~~~~l~~~~l~~~ldp~~~~~~a~~~~ 438 (450)
T 1re5_A 365 LVLAEAVSIVLAQRLGRDRAHHLLEQCCQRAVAEQRHLRAVLGDEPQVSAELSGEELDRLLDPAHYLGQARVWV 438 (450)
T ss_dssp GGGHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCHHHHHHTCHHHHHHSCHHHHHHHTCGGGCCTTHHHHH
T ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHhChhhccCCCHHHHHHhcCHHHHhhhHHHHH
Confidence 54 6677799999999764 56788999999999876 6799999999999999999887654
No 13
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=4.9e-81 Score=685.46 Aligned_cols=437 Identities=22% Similarity=0.328 Sum_probs=377.0
Q ss_pred CCCCch----HhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCccc
Q psy7883 21 DKYYGA----QTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPL 95 (607)
Q Consensus 21 ~~~yg~----~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~ 95 (607)
+++||. ++.|.+.+|++|+. .|..++++++.+|+|||+||.++| ||++++++|.++|++|.++.. +++|++
T Consensus 3 ~~~~g~r~~~~t~~~~~~f~~s~~---~d~~l~~~~i~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~-~~~f~~ 78 (462)
T 2e9f_A 3 HRTWGGRFGEGPDALAARFNASLA---FDRALWREDLWQNRVHARMLHAVGLLSAEELEAILKGLDRIEEEIE-AGTFPW 78 (462)
T ss_dssp -----------CCSHHHHHHCCHH---HHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH-HTCSCC
T ss_pred ccccCCccchhhHHHHHhccCCCc---cCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhHh-cccCCc
Confidence 467887 99999999999875 688999999999999999999999 999999999999998876433 556776
Q ss_pred cccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 96 SIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDAL 175 (607)
Q Consensus 96 ~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L 175 (607)
+. .++|+||+ +++++++++| +.|+ +||+||||||+++|+++|++|+.+. .|.+.|..|+++|
T Consensus 79 ~~----~~~dv~~~----~~~~l~e~~g-~~g~--------~vH~g~SsnDv~~Ta~~l~lr~~l~-~l~~~l~~L~~~L 140 (462)
T 2e9f_A 79 RE----ELEDVHMN----LEARLTELVG-PPGG--------KLHTARSRNDQVATDLRLYLRGAID-ELLALLLALRRVL 140 (462)
T ss_dssp CG----GGCSHHHH----HHHHHHHHHC-TTHH--------HHTTTCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred CC----CCCchHHH----HHHHHHHHcc-cccc--------ceecCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 53 47898888 6788899998 5554 4557999999999999999999875 6999999999999
Q ss_pred HHHHHHhccc--ccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccc-cCCCCCCcchhHHHHH
Q psy7883 176 DKKSQEFQNI--IKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQ 252 (607)
Q Consensus 176 ~~lA~~~~dt--~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAv-GT~~~~d~~~~~~v~~ 252 (607)
.++|++|+|+ +||||||+||||||||||||++|+++|.||++||.+++++++.+||||||+ ||++++++ +
T Consensus 141 ~~~A~~~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgaA~aGt~~~~~~-------~ 213 (462)
T 2e9f_A 141 VREAEKHLDPLYVLPGYTHLQRAQPVLLAHWFLAYYEMLKRDAGRLEDAKERLNESPLGAAALAGTGFPIDR-------H 213 (462)
T ss_dssp HHHHHHTTTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCEECTTCCSSSCCSSCCCH-------H
T ss_pred HHHHHHccCcCccccCcccCccCeeccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCccccccccCCCCCCH-------H
Confidence 9999999999 999999999999999999999999999999999999999999999999987 99998886 4
Q ss_pred HHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCC-CCCCCCCCCCCh
Q psy7883 253 RISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENE-PGSSIMPGKVNP 331 (607)
Q Consensus 253 ~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~-~GSSiMPqKrNP 331 (607)
++|+.|||+ .+..|+++|+++||++++++++++.++++|+|||+||++|+|+ |||||++|+.. +|||||||||||
T Consensus 214 ~~a~~LG~~-~~~~n~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~s~---e~g~iel~e~~~~GSSiMP~K~NP 289 (462)
T 2e9f_A 214 FTARELGFK-APMRNSLDAVASRDFALEVLSALNIGMLHLSRMAEELILYSTE---EFGFVEVPDAFATGSSIMPQKKNP 289 (462)
T ss_dssp HHHHHTTCS-EECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTST---TTCCEECCGGGCEECSSSSSCEEC
T ss_pred HHHHHhCCC-CCCCCcHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCcEEecCCCCCCCCCCCCCcCC
Confidence 699999999 4789999999999999999999999999999999999999985 69999999875 699999999999
Q ss_pred hHHHHHHHHHHHhhcchHHHHh--cccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhh
Q psy7883 332 TQVEALTMVAAQVMGNHVAVTV--GGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDS 409 (607)
Q Consensus 332 ~~~E~ir~~a~~v~G~~~~~~~--~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~ 409 (607)
+.+|+++++|+++.|++.+++. .+.+.+++++.+.+ ...+++++..+..++ ..+..+++||+||+++|+++++.+
T Consensus 290 ~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~rDl~~~--~~~l~~s~~~~~~~l-~~~~~~l~gl~vn~e~m~~~l~~~ 366 (462)
T 2e9f_A 290 DILELIRAKAGRVLGAFVGLSAVVKGLPLAYNKDLQED--KEPLLDALATYRDSL-RLLAALLPGLKWRRERMWRAAEGG 366 (462)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHTTCCSSBCGGGGGG--HHHHHHHHHHHHHHH-HHHHHHGGGCEECHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchHhhhchhhh--HhHHHHHHHHHHHHH-HHHHHHhCcCEECHHHHHHHHhcC
Confidence 9999999999999999988874 45556778776553 234667777776555 455579999999999999999999
Q ss_pred HhHHHhhCC-----CCCHHHHHHHH----HHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCcccCCCccccc
Q psy7883 410 LMLVTALNP-----HIGYDKAAEIA----KHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETI 480 (607)
Q Consensus 410 ~~lat~La~-----~ig~~~Ah~ia----~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~~~~~~~~~v~~~~ 480 (607)
++++|+|++ ++||++||+++ ++|.++|++|+| +..+++.++ +..+.+++.+ +
T Consensus 367 ~~~at~l~~~Lv~~G~~~r~ay~~v~~~~~~a~~~g~~l~e-------~~~~~~~~~-----------~~~l~~~l~~-~ 427 (462)
T 2e9f_A 367 YTLATELADYLAEKGLPFREAHHVVGRLVRRLVEEGRALKD-------LTLEELQAH-----------HPLFAEDALP-L 427 (462)
T ss_dssp STTHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHTTCCGGG-------CCHHHHHHH-----------CTTCCGGGGG-G
T ss_pred ccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHCcCHHH-------HHHHHHHHh-----------hhhhHHHHHH-h
Confidence 998887754 57999999865 567789999988 677776664 2234567887 9
Q ss_pred cchHHHHHHHhhhccCCCCCCCCCchhhhhcc
Q psy7883 481 FHTEKVISQQILAAKVLPPWSRPSCPQARSII 512 (607)
Q Consensus 481 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (607)
++++++|+++...||++|..+..+++++++.+
T Consensus 428 ldp~~~~~~r~~~gG~a~~~v~~~i~~~~~~l 459 (462)
T 2e9f_A 428 LRLETAIHRRRSYGGTAPEAVRERLEEAKKEV 459 (462)
T ss_dssp GSHHHHTTSCCSTTSSCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHhcCcCCCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999887754
No 14
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP}
Probab=100.00 E-value=5.3e-80 Score=675.94 Aligned_cols=412 Identities=20% Similarity=0.205 Sum_probs=348.2
Q ss_pred cCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCcccc
Q psy7883 18 VPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLS 96 (607)
Q Consensus 18 ~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~ 96 (607)
.|.+.+|+..+|+.+| ++++++++|++||+|||+||.++| ||++++++|.++|++ +++ .++
T Consensus 6 ~~~~~ry~~~~~~~~~----------sd~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~---~~~-----~~~ 67 (451)
T 3c8t_A 6 PLYGRSFADDKMRELF----------SAQSFISRCVETEVALARAQARLGIIPEDAAAGITAAART---FAP-----EME 67 (451)
T ss_dssp CCSSCCCSCHHHHHHT----------SHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH---CCC-----CHH
T ss_pred CccccccCcHHHHHHc----------CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhhh---cCC-----CHH
Confidence 4777899999999999 899999999999999999999999 999999999999975 222 233
Q ss_pred ccccCCCcccccchhHHHHH--HHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 97 IWQTGSGTQTNMNVNEVISN--RAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDA 174 (607)
Q Consensus 97 ~~~~~~~~di~~~vnevIe~--~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~ 174 (607)
.++.+.++ +.|+|+++ .+++++|+ .|+ +||+|||||||++|+++|++|+.+. .|.+.|..|+++
T Consensus 68 ~~~~~~~~----~~~dVia~~~~l~e~~g~-~g~--------~vH~g~SsnDv~~Ta~~L~lr~~l~-~l~~~l~~L~~~ 133 (451)
T 3c8t_A 68 RLRDDTEI----VGYPILPLVEQLSAHAGE-AGK--------YLHWGATTQDIMDTATVLQIRDGLA-LISRRIESVRKA 133 (451)
T ss_dssp HHHHHHHH----HSSSHHHHHHHHHHHHGG-GGG--------GSSSSCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHhhc----CCCcHHHHHHHHHHHccc-ccc--------cccCCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 33322222 34555555 55788984 554 4557999999999999999999875 699999999999
Q ss_pred HHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHH
Q psy7883 175 LDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRI 254 (607)
Q Consensus 175 L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~l 254 (607)
|.++|++|++++||||||+|+||||||||||++|+++|.||++||.+++++++.+|||| |+||+.+..+ +++.+++++
T Consensus 134 L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-AvGT~~~~~~-~~~~~~~~~ 211 (451)
T 3c8t_A 134 LAALARNHRDTPMAGRTHLQHALPVTFGYKAAVWLSAFDRHAARLEEISPRVLVVEFSG-ASGTLASLGT-RGLDVQREL 211 (451)
T ss_dssp HHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCBCCCCC-TTSSCGGGTT-CHHHHHHHH
T ss_pred HHHHHHHccCceeecccCCCCceeehHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hhhcCccccc-ccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 5799988855 888999999
Q ss_pred HHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCC--CCCCCCCCCCCCChh
Q psy7883 255 SELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPT 332 (607)
Q Consensus 255 a~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~ 332 (607)
++.|||+.++.+ ++.+||++++++++++.++++|+|||+||++|++ +||||+.+|. +++|||||||||||+
T Consensus 212 a~~LGl~~~~~~----~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~~---~e~gEl~~p~~~~q~GSSiMP~K~NP~ 284 (451)
T 3c8t_A 212 ARELNLGVPSIT----WHSARDAVAETVQFLALVSGSLGKLAMDISIMMT---TELGEVAEPFVRHRGASSTMPQKQNPV 284 (451)
T ss_dssp HHHHTCBCCSSC----CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---TTTCCEECC---------------CCH
T ss_pred HHHhCCCCCCCC----CccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---ccccccccccccCCCCCCCCCCCcCCH
Confidence 999999975544 4669999999999999999999999999999995 7999999996 689999999999999
Q ss_pred HHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhH
Q psy7883 333 QVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLML 412 (607)
Q Consensus 333 ~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~l 412 (607)
.+|.++++|++++|+..+++. +.+++||+|.+.+.+.+.++++...+.+.++.++.+|++||+||++||+++++.+.++
T Consensus 285 ~~E~i~~~a~~v~g~~~~~~~-~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~s~~~ 363 (451)
T 3c8t_A 285 SCELILAGARIVRNHATSMLD-AMIHDFERATGPWHLEWSAVPEGFAVASGILYQAEFMLGGLQVFPDRMRENLDHSRGL 363 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HTCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCEECHHHHHHHHTTTTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCchhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHHHhccCh
Confidence 999999999999999988764 4667899998887767778877777777888889999999999999999999866555
Q ss_pred H------HhhCCCCCHHHHHHHH----HHHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCCcc
Q psy7883 413 V------TALNPHIGYDKAAEIA----KHAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYHPY 471 (607)
Q Consensus 413 a------t~La~~ig~~~Ah~ia----~~A~~~g~~l~e~l~~~----~~Ls~eel~~lldP~~~vg~~~~~~ 471 (607)
+ +.|++++||++||+++ ++|.++|++|+|++.+. +.|+++|++++|||.+|+|+++.++
T Consensus 364 ~~ae~l~~~L~~~ig~~~A~~iv~~~~~~a~~~g~~l~e~~~~~~~~~~~l~~~~l~~~ldp~~~~~~~~~~~ 436 (451)
T 3c8t_A 364 IVAEAVMMALAPHTGRKEAHDIVYLGCRRAVEDKTGLFEVLRTMPEVAKPLGEEALRDLTDPRNYLGSAGAMV 436 (451)
T ss_dssp GGHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCHHHHHTTCHHHHHHHCHHHHHHHTCGGGCCTTHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCHHHHHhcChhhhccCCHHHHHHhCCHHHHhchHHHHH
Confidence 3 5677779999999976 67788999999998876 6689999999999999999877543
No 15
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A
Probab=100.00 E-value=1.1e-80 Score=683.67 Aligned_cols=435 Identities=18% Similarity=0.250 Sum_probs=376.3
Q ss_pred CCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCccccccccC
Q psy7883 23 YYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTG 101 (607)
Q Consensus 23 ~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~~~~ 101 (607)
+|+.++.|.+.+|++|+. .|+.++++|+++|+|||+||.++| ||++++++|.++|++|.++.. +++|+++.
T Consensus 14 r~~~~~~~~~~~f~~s~~---~d~~~~~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~-~~~f~~~~---- 85 (468)
T 1k7w_A 14 RFSGSTDPIMEKLNSSIA---YDQRLSEVDIQGSMAYAKALEKAGILTKTELEKILSGLEKISEEWS-KGVFVVKQ---- 85 (468)
T ss_dssp -----CCHHHHHHHCCHH---HHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH-HTCCCCCT----
T ss_pred ccchhHHHHHHHccCCCc---ccHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhhh-cccCccCC----
Confidence 444488888999988875 689999999999999999999999 999999999999998876433 55677653
Q ss_pred CCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 102 SGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQE 181 (607)
Q Consensus 102 ~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA~~ 181 (607)
.++|+||+ +++++++++| +.|+ +||+|+|||||++|+++|++|+.+. .|.+.|..|+++|.++|++
T Consensus 86 ~~~dv~m~----~~~~l~e~~g-~~g~--------~vH~g~SsnDv~~Ta~~l~lr~~l~-~l~~~L~~L~~~L~~~A~~ 151 (468)
T 1k7w_A 86 SDEDIHTA----NERRLKELIG-DIAG--------KLHTGRSRNDQVVTDLKLFMKNSLS-IISTHLLQLIKTLVERAAI 151 (468)
T ss_dssp TCCSHHHH----HHHHHHHHHC-GGGG--------GGGTTCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHH----HHHHHHHHcc-cccc--------ceecCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 57898888 7889999998 5554 4557999999999999999999875 6999999999999999999
Q ss_pred hcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccc-cCCCCCCcchhHHHHHHHHHHhCC
Q psy7883 182 FQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRISELTGL 260 (607)
Q Consensus 182 ~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAv-GT~~~~d~~~~~~v~~~la~~LGl 260 (607)
|+|++||||||+||||||||||||++|+++|.||++||.+++++++.+||||||+ ||++++++ +++|++|||
T Consensus 152 ~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgaA~aGt~~~~~~-------~~la~~LG~ 224 (468)
T 1k7w_A 152 EIDVILPGYTHLQKAQPIRWSQFLLSHAVALTRDSERLGEVKKRINVLPLGSGALAGNPLDIDR-------EMLRSELEF 224 (468)
T ss_dssp TTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHSEECTTCTTTTCCTTCCCH-------HHHHHHHTC
T ss_pred ccCCEeeccccCcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCh-------HHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999987 99998886 469999999
Q ss_pred CCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCC-CCCCCCCCCCChhHHHHHHH
Q psy7883 261 PFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENE-PGSSIMPGKVNPTQVEALTM 339 (607)
Q Consensus 261 ~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~-~GSSiMPqKrNP~~~E~ir~ 339 (607)
+ .+..|+++|+++||++++++++++.++++|+|||+||++|+|+ |||||++|+.. +|||||||||||+.+|++++
T Consensus 225 ~-~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~s~---e~g~iel~e~~~~GSSiMP~K~NP~~~E~i~~ 300 (468)
T 1k7w_A 225 A-SISLNSMDAISERDFVVEFLSFATLLMIHLSKMAEDLIIYSTS---EFGFLTLSDAFSTGASLMPQKKNPDSLELIRS 300 (468)
T ss_dssp S-EECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTST---TTCCEECCGGGCEEETTEEEEEECHHHHHHHH
T ss_pred C-CCCCChHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCceeccCCCCCCCCCCCCCCCcHHHHHHHH
Confidence 9 4789999999999999999999999999999999999999984 69999999875 69999999999999999999
Q ss_pred HHHHhhcchHHHHh--cccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhHHHhhC
Q psy7883 340 VAAQVMGNHVAVTV--GGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALN 417 (607)
Q Consensus 340 ~a~~v~G~~~~~~~--~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~lat~La 417 (607)
+|+++.|++.+++. .+.+.+++++.+.+ ...+++++..+..++ ..+..+++||+||+++|+++++.+ +++|+|+
T Consensus 301 ~a~~v~g~~~~~~~~~~~~p~~~~rDl~~~--~~~l~~s~~~~~~~l-~~~~~~l~gl~vn~e~m~~~l~~~-~~at~l~ 376 (468)
T 1k7w_A 301 KAGRVFGRLASILMVLKGLPSTYNKDLQED--KEAVFDVVDTLTAVL-QVATGVISTLQISKENMEKALTPE-MLATDLA 376 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSSCCGGGGGH--HHHHHHHHHHHHHHH-HHHHHHHHHCEECHHHHHHTCCGG-GGHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCchHhhhhhhhh--HhHHHHHHHHHHHHH-HHHHHHhCCCEECHHHHHHHhhCC-ChHHHHH
Confidence 99999999988874 45556778776553 235667777776655 455579999999999999999988 8888664
Q ss_pred -----CCCCHHHHHHHH----HHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCcccCCCccccccchHHHHH
Q psy7883 418 -----PHIGYDKAAEIA----KHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVIS 488 (607)
Q Consensus 418 -----~~ig~~~Ah~ia----~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~~~~~~~~~v~~~~~~~~~~v~ 488 (607)
.++||++||+++ ++|.++|++|+| +..+++.++ +..+.+++.+ +++++++|+
T Consensus 377 ~~Lv~~G~~~r~ay~~v~~~~~~a~~~g~~l~e-------~~~~~~~~~-----------~~~l~~~~~~-~ldp~~~~~ 437 (468)
T 1k7w_A 377 LYLVRKGVPFRQAHTASGKAVHLAETKGITINK-------LSLEDLKSI-----------SPQFSSDVSQ-VFNFVNSVE 437 (468)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHHHHHTTTCCGGG-------CCHHHHHHH-----------CTTCCGGGGG-GSCHHHHHT
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhCCChHH-------HHHHHHHHH-----------HHhhHHHHHH-hCCHHHHHh
Confidence 468999999875 456778999988 777777664 2234567887 999999999
Q ss_pred HHhhhccCCCCCCCCCchhhhhccc
Q psy7883 489 QQILAAKVLPPWSRPSCPQARSIIR 513 (607)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (607)
++...||++|..+..++.++++.+.
T Consensus 438 ~r~~~GG~a~~~v~~~i~~~~~~l~ 462 (468)
T 1k7w_A 438 QYTALGGTAKSSVTTQIEQLRELMK 462 (468)
T ss_dssp TCCSTTSSSHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999887654
No 16
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A
Probab=100.00 E-value=2.4e-79 Score=667.10 Aligned_cols=402 Identities=20% Similarity=0.230 Sum_probs=347.9
Q ss_pred CCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCccccccccC
Q psy7883 23 YYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTG 101 (607)
Q Consensus 23 ~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~~~~ 101 (607)
+|+..+|+.+| ++++++++|++||+|||+||.++| ||++++++|.++| ++ .++.++.+
T Consensus 3 ry~~~~~~~~~----------sd~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~------~~-----d~~~i~~~ 61 (429)
T 1c3c_A 3 RYSLSPMKDLW----------TEEAKYRRWLEVELAVTRAYEELGMIPKGVTERIRNNA------KI-----DVELFKKI 61 (429)
T ss_dssp GGCCTTHHHHT----------SHHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHC------CC-----CHHHHHHH
T ss_pred CcccHHHHHHc----------ChHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhC------CC-----CHHHHHHH
Confidence 78889999999 899999999999999999999999 9999999999996 11 11111111
Q ss_pred CCcccccchhHHHHH--HHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 102 SGTQTNMNVNEVISN--RAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKS 179 (607)
Q Consensus 102 ~~~di~~~vnevIe~--~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA 179 (607)
.+ .+.|+|+++ .+.+++|+ .|+ +||+||||||+++|+++|++|+.+. .|.+.|..|+++|.++|
T Consensus 62 ~~----~~~~dVia~~~~l~e~~g~-~g~--------~vH~g~SsnD~~~Ta~~l~lr~~~~-~l~~~l~~l~~~L~~~A 127 (429)
T 1c3c_A 62 EE----KTNHDVVAFVEGIGSMIGE-DSR--------FFHYGLTSSDVLDTANSLALVEAGK-ILLESLKEFCDVLWEVA 127 (429)
T ss_dssp HH----HHCCHHHHHHHHHHHHHGG-GGG--------GTTTTCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred Hh----ccCCChHHHHHHHHHHcCc-ccc--------cccCCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 11 134666655 55788984 454 4557999999999999999999875 69999999999999999
Q ss_pred HHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHHHHHhC
Q psy7883 180 QEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTG 259 (607)
Q Consensus 180 ~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~la~~LG 259 (607)
++|+|++||||||+||||||||||||++|+++|.||++||.+++++++.+|||| |+||+.+.+ .++++++++.||
T Consensus 128 ~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-AvGt~~~~~----~~~~~~~a~~LG 202 (429)
T 1c3c_A 128 NRYKHTPTIGRTHGVHAEPTSFGLKVLGWYSEMKRNVQRLERAIEEVSYGKISG-AVGNYANVP----PEVEEKALSYLG 202 (429)
T ss_dssp HHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHTCEECCCC-TTSSCSSSC----HHHHHHHHHHTT
T ss_pred HHhcCCeeecCcCCCcCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCch-hhcCCccCC----HHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999 579998875 367899999999
Q ss_pred CCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCC--CCCCCCCCCCCCChhHHHHH
Q psy7883 260 LPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPTQVEAL 337 (607)
Q Consensus 260 l~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~~~E~i 337 (607)
|+.++ .| |++.+||++++++++++.++++|+|||+||++|++ +||||+.+|. +++|||||||||||+.+|.+
T Consensus 203 l~~~~-~~--d~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~~---~e~~El~~p~~~~q~GSSiMP~K~NP~~~E~i 276 (429)
T 1c3c_A 203 LKPEP-VS--TQVVPRDRHAFYLSTLAIVAAGIERIAVEIRHLQR---TEVLEVEEPFRKGQRGSSAMPHKKNPITCERL 276 (429)
T ss_dssp CEECS-SC--SSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---TTTCSEECCCCC-----CCCTTCCCCHHHHHH
T ss_pred CCCCC-CC--cCccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccchhccccccCCCcCCCCCCCCCcHHHHHH
Confidence 99743 33 67889999999999999999999999999999995 7999999996 68999999999999999999
Q ss_pred HHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhHH----
Q psy7883 338 TMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLV---- 413 (607)
Q Consensus 338 r~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~la---- 413 (607)
+++|+++.|+..+++.. .+++||+|.+.|.+.+.+++++..+.+.++.++.+|++||+||+++|+++++.+++++
T Consensus 277 ~~~a~~v~g~~~~~~~~-~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~s~~~~~a~~ 355 (429)
T 1c3c_A 277 TGLSRMMRAYVDPSLEN-IALWHERDISHSSVERYVFPDATQTLYYMIVTATNVVRNMKVNEERMKKNIDLTKGLVFSQR 355 (429)
T ss_dssp HHHHHHHHHTHHHHHHT-TCCSTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHTTTTTGGGHHH
T ss_pred HHHHHHHHHHHHHHHhc-CCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHCcCeeCHHHHHHHHHhccChHHHHH
Confidence 99999999999888654 4789999999988888888888888888888999999999999999999998666553
Q ss_pred --HhhCCC-CCHHHHHHH----HHHHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCCcc
Q psy7883 414 --TALNPH-IGYDKAAEI----AKHAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYHPY 471 (607)
Q Consensus 414 --t~La~~-ig~~~Ah~i----a~~A~~~g~~l~e~l~~~----~~Ls~eel~~lldP~~~vg~~~~~~ 471 (607)
+.|.++ +||++||++ +++|.++|++++|++.+. +.|+++|++++|||.+|+|+++.++
T Consensus 356 la~~L~~~gig~~~A~~iv~~~~~~a~~~g~~l~e~~~~~~~~~~~l~~~~l~~~ldp~~~~~~a~~~~ 424 (429)
T 1c3c_A 356 VLLKLIEKGLTRKEAYDIVQRNALKTWNSEKHFLEYLLEDEEVKKLVTKEELEELFDISYYLKHVDHIF 424 (429)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSCHHHHHHTCHHHHTTCCHHHHHHTTCTHHHHTTHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHhCChhhhccCCHHHHHHhCCHHHHhhhHHHHH
Confidence 566664 999999976 566778999999999887 7899999999999999999887654
No 17
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A*
Probab=100.00 E-value=6.5e-79 Score=665.86 Aligned_cols=404 Identities=20% Similarity=0.198 Sum_probs=353.4
Q ss_pred CCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCcccccccc
Q psy7883 22 KYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQT 100 (607)
Q Consensus 22 ~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~~~ 100 (607)
.+|-.++|+++| ++++++++|++||+|||+||.++| ||++++++|.++| ++ .++.++.
T Consensus 12 ~~~~~~~~~~i~----------sd~~~i~~~~~v~~A~a~a~~~~G~i~~~~a~~I~~a~------~~-----d~~~i~~ 70 (444)
T 2pfm_A 12 SRYTRPEMGAIW----------TEENKFKAWLEVEILACEAWAELGDIPKEDVKKIREHA------SF-----DIDRIYE 70 (444)
T ss_dssp CTTCCHHHHHHT----------SHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHC------CC-----CHHHHHH
T ss_pred HhcchHHHHHHc----------ChHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhC------CC-----CHHHHHH
Confidence 488889999999 899999999999999999999999 9999999999986 11 1111222
Q ss_pred CCCcccccchhHHHHH--HHHHHhc-cCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 101 GSGTQTNMNVNEVISN--RAIEMLG-GKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDK 177 (607)
Q Consensus 101 ~~~~di~~~vnevIe~--~l~e~lG-~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~ 177 (607)
+.+ .+.|+|+++ .+.+++| ++.|+ +||+|||||||++|+++|++|+.+. .|.+.|..|+++|.+
T Consensus 71 ~~~----~~~~dVia~~~~l~e~~g~g~~g~--------~vH~g~SsnDv~~Ta~~L~lr~~l~-~l~~~l~~L~~~L~~ 137 (444)
T 2pfm_A 71 IEK----ETRHDVVAFTRAVSETPALGEERK--------WVHYGLTSTDVVDTALSYILKQANE-IILKDLENFVSILAN 137 (444)
T ss_dssp HHH----HHCCHHHHHHHHHHTCTTCCGGGG--------GTTTTCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred Hhc----cCCCCHHHHHHHHHHHcCCCcccc--------cccCCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 111 235676666 4467774 34443 4567999999999999999999875 699999999999999
Q ss_pred HHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHHHHH
Q psy7883 178 KSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISEL 257 (607)
Q Consensus 178 lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~la~~ 257 (607)
+|++|+|++||||||+|+||||||||||++|+++|.||++||.+++++++.+|||| |+||+.+.+ .++++++++.
T Consensus 138 ~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-AvGt~~~~~----~~~~~~~a~~ 212 (444)
T 2pfm_A 138 KAKEHKYTIMMGRTHGVHAEPTTFGLKLGLWYEEMKRNVERFKQAANTVRVGKLSG-AVGTYANID----PFVEKYVCEN 212 (444)
T ss_dssp HHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHTCEECCCC-TTSSCTTSC----HHHHHHHHHH
T ss_pred HHHHhcCCeeecccCCccceeccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCch-hhccCCcCC----HHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 579998875 3678999999
Q ss_pred hCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCC--CCCCCCCCCCCCChhHHH
Q psy7883 258 TGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPTQVE 335 (607)
Q Consensus 258 LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~~~E 335 (607)
|||+.++ .| |++.+||++++++++++.++++|+|||+||++|++ +||||+.+|. +++|||||||||||+.+|
T Consensus 213 LGl~~~~-~~--d~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~~---~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E 286 (444)
T 2pfm_A 213 LGLEAAP-IS--TQTLQRDRHAHYMSTLALIATSIEKMAVEIRGLQK---SETREVEEAFAKGQKGSSAMPHKRNPIGSE 286 (444)
T ss_dssp TTCEECS-SC--SSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---TTTCSEECCCCTTCCSCSSCTTCCCCHHHH
T ss_pred hCCCCCC-CC--cCccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccccccccccccCCCcCccCCcccCCHHHH
Confidence 9999744 33 67889999999999999999999999999999995 7999999996 689999999999999999
Q ss_pred HHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhHH--
Q psy7883 336 ALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLV-- 413 (607)
Q Consensus 336 ~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~la-- 413 (607)
.++++|+++.|+..+++.+ .+++||+|.+.|.+.+.+++++..+.+.++.++.+|++||+||+++|+++++.+++++
T Consensus 287 ~i~~~a~~v~g~~~~~~~~-~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~s~~~~~a 365 (444)
T 2pfm_A 287 NMTGLARVIRGYMMTAYEN-VPLWHERDISHSSAERVILPDATIALNYMLNRFGNIVKNLTVYPENMKRNMTRTYGLIYS 365 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHT-SCCCTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECHHHHHHHHTTTTTGGGH
T ss_pred HHHHHHHHHHHHHHHHHHh-CcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCcCchHH
Confidence 9999999999999888655 5789999999988888899888888888888899999999999999999998666553
Q ss_pred ----HhhCCC-CCHHHHHHH----HHHHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCCcc
Q psy7883 414 ----TALNPH-IGYDKAAEI----AKHAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYHPY 471 (607)
Q Consensus 414 ----t~La~~-ig~~~Ah~i----a~~A~~~g~~l~e~l~~~----~~Ls~eel~~lldP~~~vg~~~~~~ 471 (607)
+.|.+. +||++||++ +++|.++|++|+|++.+. +.|+++|++++|||.+|+|.++.++
T Consensus 366 e~la~~L~~~gig~~~A~~iv~~~~~~a~~~g~~l~e~~~~~~~~~~~l~~~~l~~~ldp~~~~~~a~~~~ 436 (444)
T 2pfm_A 366 QRVMLTLIDKGMVREEAYDIVQPKAMEAWETQVQFKELVEADERITSKLTQEEINECFNYEHHMQHVDTIF 436 (444)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCHHHHHHTCHHHHTTSCHHHHHHHTCGGGGGTTHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCCHHHHHhcchhhhccCCHHHHHHhCCHHHHHhHHHHHH
Confidence 566664 999999976 567788999999999887 7899999999999999999887654
No 18
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1
Probab=100.00 E-value=1.9e-79 Score=672.04 Aligned_cols=437 Identities=18% Similarity=0.254 Sum_probs=375.2
Q ss_pred CCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCcccccccc
Q psy7883 22 KYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQT 100 (607)
Q Consensus 22 ~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~~~~~ 100 (607)
.+|..++.+.+.+|+.|.. .|..++++.+.+++|||+||.++| ||++++++|.++|+++.++.. +++|+++..
T Consensus 6 gr~~~~~~~~~~~f~~s~~---~d~~l~~~~i~~~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~-~~~~~~~~~-- 79 (457)
T 1tj7_A 6 GRFTQAADQRFKQFNDSLR---FDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEALNVLLEDVR-ARPQQILES-- 79 (457)
T ss_dssp TTCSSCCCHHHHHHHCCHH---HHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH-HCGGGGGGS--
T ss_pred cccccchHHHHHHHhcChh---hhHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhHh-cCCcCcCCC--
Confidence 4555577888888887765 578999999999999999999999 999999999999988765332 456666532
Q ss_pred CCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 101 GSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQ 180 (607)
Q Consensus 101 ~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~~lA~ 180 (607)
.++|+||+ +++++.+++|+ .|+ +||+||||||+++|+++|++|+.+. .|.+.|..|+++|.++|+
T Consensus 80 -~~~dv~~~----v~~~l~e~~g~-~g~--------~vH~g~SsnD~~~Ta~~l~lr~~l~-~l~~~l~~l~~~L~~~A~ 144 (457)
T 1tj7_A 80 -DAEDIHSW----VEGKLIDKVGQ-LGK--------KLHTGRSRNDQVATDLKLWCKDTVS-ELLTANRQLQSALVETAQ 144 (457)
T ss_dssp -CCSSHHHH----HHHHHHHHHGG-GGG--------GTTTTCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred -CCCcHHHH----HHHHHHHHccc-ccc--------ceecCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 68999988 66788899984 554 4557999999999999999999875 699999999999999999
Q ss_pred HhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccc-cCCCCCCcchhHHHHHHHHHHhC
Q psy7883 181 EFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRISELTG 259 (607)
Q Consensus 181 ~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAv-GT~~~~d~~~~~~v~~~la~~LG 259 (607)
+|+|++||||||+||||||||||||++|+++|.||++||.+++++++.+||||||+ ||++++++ +++|+.||
T Consensus 145 ~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgaA~aGt~~~~~~-------~~la~~LG 217 (457)
T 1tj7_A 145 NNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDR-------EQLAGWLG 217 (457)
T ss_dssp TTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCBCTTCTTTTCCSSCCCH-------HHHHHHHT
T ss_pred HccCCeeeccccCcCCeechHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCCCCCH-------HHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999987 99999886 46999999
Q ss_pred CCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCC-CCCCCCCCCCChhHHHHHH
Q psy7883 260 LPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENE-PGSSIMPGKVNPTQVEALT 338 (607)
Q Consensus 260 l~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~-~GSSiMPqKrNP~~~E~ir 338 (607)
|+. +..|+++|+++||++++++++++.++++|+|||+||++|+|+ |||||++|+.. +|||||||||||+.+|+++
T Consensus 218 l~~-~~~n~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~---e~g~iel~e~~~~GSSiMP~K~NP~~~E~i~ 293 (457)
T 1tj7_A 218 FAS-ATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNTG---EAGFVELSDRVTSGSSLMPQKKNPDALELIR 293 (457)
T ss_dssp CSS-BCSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTST---TTCCEECCGGGCBCCTTCTTCCBCHHHHHHH
T ss_pred CCC-CCCChHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCceeccCCCCCCCCCCCCCCCcHHHHHHH
Confidence 995 789999999999999999999999999999999999999984 69999999874 7999999999999999999
Q ss_pred HHHHHhhcchHHHHh--cccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhHHHhh
Q psy7883 339 MVAAQVMGNHVAVTV--GGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTAL 416 (607)
Q Consensus 339 ~~a~~v~G~~~~~~~--~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~lat~L 416 (607)
++|+++.|+..+++. .+.+.+++++.+.. ...+++++..+..++ ..+..|++||+||+++|++++..+++++|+|
T Consensus 294 ~~a~~v~g~~~~~~~~~~~~p~~~~RDl~~~--~~~l~~s~~~~~~~l-~~~~~~l~gl~vn~~~m~~~l~~~~~~at~l 370 (457)
T 1tj7_A 294 GKCGRVQGALTGMMMTLKGLPLAYNKDMQED--KEGLFDALDTWLDCL-HMAALVLDGIQVKRPRCQEAAQQGYANATEL 370 (457)
T ss_dssp HTHHHHHHHHHHHHHHHTTCCSSCCGGGGGH--HHHHHHHHHHHHHHH-HHHHHHHTTCEECHHHHHHHHTSTTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCcHHhhcchhhH--HhHHHHHHHHHHHHH-HHHHHHHccCEECHHHHHHHHhcCCchHHHH
Confidence 999999999998863 44556777776543 234666666666555 4555799999999999999999999888876
Q ss_pred CC-----CCCHHHHHHHH----HHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCcccCCCccccccchHHHH
Q psy7883 417 NP-----HIGYDKAAEIA----KHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVI 487 (607)
Q Consensus 417 a~-----~ig~~~Ah~ia----~~A~~~g~~l~e~l~~~~~Ls~eel~~lldP~~~vg~~~~~~~~~~v~~~~~~~~~~v 487 (607)
++ ++||++||+++ ++|.++|++++| +..+++..+ ...+.+++.+ +++++++|
T Consensus 371 ~~~Lv~~G~~~r~Ay~~v~~~~~~a~~~g~~l~e-------~~~~~~~~~-----------~~~~~~~l~~-~ldp~~~v 431 (457)
T 1tj7_A 371 ADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLED-------LPLSELQKF-----------SQVIDEDVYP-ILSLQSCL 431 (457)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCGGG-------SCHHHHTTT-----------CTTCCTTHHH-HTSHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHCcCHHH-------HHHHHHHHH-----------hhhcHHHHHH-hCCHHHHH
Confidence 53 57899999875 467788999988 555665442 2234667888 99999999
Q ss_pred HHHhhhccCCCCCCCCCchhhhhcc
Q psy7883 488 SQQILAAKVLPPWSRPSCPQARSII 512 (607)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (607)
+++...||++|..+..++.++++.+
T Consensus 432 ~~r~~~gG~a~~~v~~~i~~~~~~l 456 (457)
T 1tj7_A 432 DKRAAKGGVSPQQVAQAIAFAQARL 456 (457)
T ss_dssp HTCCSTTCCSHHHHHHHHHHHHHHH
T ss_pred hccCCCCCCCHHHHHHHHHHHHHhc
Confidence 9999999999999999988877643
No 19
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1
Probab=100.00 E-value=1.4e-75 Score=632.29 Aligned_cols=377 Identities=21% Similarity=0.253 Sum_probs=320.2
Q ss_pred cCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCcccc
Q psy7883 18 VPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLS 96 (607)
Q Consensus 18 ~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~~~~ 96 (607)
.|++.+|+.++|+.+| +|++++++|++||+|||++|.++| ||++++++|.++ ++ +++
T Consensus 4 sp~~~ry~~~~~~~i~----------sd~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a-------~~-----d~~ 61 (403)
T 1dof_A 4 SPFDWRYGSEEIRRLF----------TNEAIINAYLEVERALVCALEELGVAERGCCEKVNKA-------SV-----SAD 61 (403)
T ss_dssp CGGGTTSSCHHHHTTS----------SHHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHC-------CC-----CTT
T ss_pred CCcccccCcHHHHHHc----------ChHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC-------CC-----CHH
Confidence 3788899999999999 899999999999999999999999 999999999877 11 223
Q ss_pred ccccCCCcccccchhHHHHH--HHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 97 IWQTGSGTQTNMNVNEVISN--RAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDA 174 (607)
Q Consensus 97 ~~~~~~~~di~~~vnevIe~--~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~ 174 (607)
.++.+.++ +.|||+++ .+++++| |+ +||+||||||+++|+++|++|+.+. .|.+.|..|+++
T Consensus 62 ~~~~~~~~----~~~dVia~~~~l~e~~G---g~--------~vH~g~SsnD~~~Ta~~l~~r~~l~-~l~~~l~~L~~~ 125 (403)
T 1dof_A 62 EVYRLERE----TGHDILSLVLLLEQKSG---CR--------YVHYGATSNDIIDTAWALLIRRALA-AVKEKARAVGDQ 125 (403)
T ss_dssp TC------------CHHHHHHHHHHHHHC---CS--------CTTTTCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHhhc----cCCcHHHHHHHHHHHcC---CC--------cccCCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 33333333 45777766 4478887 44 3457999999999999999999875 699999999999
Q ss_pred HHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHH
Q psy7883 175 LDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRI 254 (607)
Q Consensus 175 L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~l 254 (607)
|.++|++|+|++||||||+||||||||||||++|+++|.|| +||.+++++++.+|||| |+||+.+..+ |++.+++++
T Consensus 126 L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~-~rL~~~~~~~~~~~lGg-AvGt~~~~~~-~~~~~~~~~ 202 (403)
T 1dof_A 126 LASMARKYKTLEMVGRTHGQWAEPITLGFKFANYYYELYIA-CRQLALAEEFIRAKIGG-AVGTMASWGE-LGLEVRRRV 202 (403)
T ss_dssp HHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHH-HHHHHHHHHHCCBCCCC-TTSSCGGGGG-GHHHHHHHH
T ss_pred HHHHHHHhcCCeeeccccCcccccCcHHHHHHHHHHHHHHH-HHHHHHHHHhcccCccH-HHhhCccccc-ccHHHHHHH
Confidence 99999999999999999999999999999999999999999 99999999999999999 5799988755 888999999
Q ss_pred HHHhCCCCcCCCCchhhhh-chhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCCCCCCCCChhH
Q psy7883 255 SELTGLPFKSAPNKFEALA-SHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIMPGKVNPTQ 333 (607)
Q Consensus 255 a~~LGl~~~~~~ns~da~~-sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSSiMPqKrNP~~ 333 (607)
++.|||+.++.+ ++. +||++++++++++.++++|+|||+||++|++ +|||||++| + +|||||||||||+.
T Consensus 203 a~~lGl~~~~~~----~~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~~---~e~~ei~lp-~-~GSSiMP~K~NP~~ 273 (403)
T 1dof_A 203 AERLGLPHHVIT----TQVAPRESFAVLASALALMAAVFERLAVEIRELSR---PEIGEVVEG-G-GGSSAMPHKANPTA 273 (403)
T ss_dssp HHHTTCCBCSSC----SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---TTTCSEESC-C----------CCCHH
T ss_pred HHHhCcCCCCCc----chhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CccCeEeCC-C-CccCCCCCCCCchH
Confidence 999999975544 467 9999999999999999999999999999995 799999999 7 99999999999999
Q ss_pred HHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhHH
Q psy7883 334 VEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLV 413 (607)
Q Consensus 334 ~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~la 413 (607)
+|.++++|+++.|+..+++. +.+++||+|.+.+.+.|..+++...+.+.++.++.+|++||+||+++|+++++.+.+++
T Consensus 274 ~E~i~~~a~~v~g~~~~~~~-~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~s~~~~ 352 (403)
T 1dof_A 274 SERIVSLARYVRALTHVAFE-NVALWHERDLTNSANERVWIPEALLALDEILTSALRVLKNVYIDEERITENLQKALPYI 352 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TTCCCTTCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-cCcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHHhccCHH
Confidence 99999999999999988765 56689999988877666777777777777788889999999999999999999777765
Q ss_pred ------HhhCCC-CCHHHHHHHHH----HHHHcCC-CHHHHHHH
Q psy7883 414 ------TALNPH-IGYDKAAEIAK----HAYKTGI-TLKEAAVK 445 (607)
Q Consensus 414 ------t~La~~-ig~~~Ah~ia~----~A~~~g~-~l~e~l~~ 445 (607)
+.|.++ +||++||++++ +|.++|+ +++|++.+
T Consensus 353 ~a~~l~~~L~~~gig~~~A~~iv~~~~~~a~~~g~~~l~e~~~~ 396 (403)
T 1dof_A 353 LTEFHMNRMIKEGASRAEAYKKAKEVKALTFEYQKWPVERLIED 396 (403)
T ss_dssp CHHHHHHHHHHTTCCHHHHHHHHTTCCCCCCGGGGCCHHHHHHH
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCcCHHHHHHH
Confidence 677765 99999999976 6778898 99997765
No 20
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp}
Probab=100.00 E-value=1.6e-74 Score=629.32 Aligned_cols=374 Identities=18% Similarity=0.208 Sum_probs=308.5
Q ss_pred CCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH----HHHcCccccCCcccc
Q psy7883 22 KYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAAD----EVISGKLYEDHFPLS 96 (607)
Q Consensus 22 ~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~----~i~~~~~~~~~~~~~ 96 (607)
.+|++++|+++| ++++++++|++||.|+++++++ | ||++++++|.++++ .+.+.+
T Consensus 3 ~ry~~~~m~~~f----------s~~~~~~~~l~ve~Ala~a~~~-GlIp~~~~~~i~~~~~~d~~~i~~~e--------- 62 (438)
T 4eei_A 3 KRYDVAEISKIW----------ADENKYAKMLEVELAILEALED-RMVPKGTAAEIRARAQIRPERVDEIE--------- 62 (438)
T ss_dssp GGGCCHHHHHHH----------SHHHHHHHHHHHHHHHHHHGGG-TTSCTTHHHHHHHHCCCCHHHHHHHH---------
T ss_pred cccCcHHHHHHc----------ChHHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHhhCCCCHHHHHHHH---------
Confidence 489999999999 8999999999999999999999 9 99999999988852 111100
Q ss_pred ccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 97 IWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALD 176 (607)
Q Consensus 97 ~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~~L~ 176 (607)
...++|+ .. +++.+.+.+|++.|+ |||+|+|||||++|+++|++|+.+. .|.+.|..|+++|.
T Consensus 63 ---~~~~hdV----~a-~~~~l~e~~g~~~~~--------~iH~G~SsnDv~~Ta~~L~lr~~~~-~l~~~L~~l~~~L~ 125 (438)
T 4eei_A 63 ---KVTKHDI----IA-FCTSIAEQFTAETGK--------FFHFGVTSSDIIDSALSLQIRDSMS-YVIKDLEALCDSLL 125 (438)
T ss_dssp ---HHHSCHH----HH-HHHHHHTTSCTTTTT--------TTTCSCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred ---HhcCCCH----HH-HHHHHHHHcCHHhhc--------ccCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 0123343 22 556777888854355 4557999999999999999999864 69999999999999
Q ss_pred HHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHHHHH
Q psy7883 177 KKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISE 256 (607)
Q Consensus 177 ~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~la~ 256 (607)
++|++|+|++||||||+||||||||||||++|+++|.||++||.+++++++.+|||| |+||+++++++ +++++++
T Consensus 126 ~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lgG-AvGT~~~~~~~----~~~~~a~ 200 (438)
T 4eei_A 126 TKAEETKEIITMGRSHGMFAEPMSFGQKFLGAYVEFKRRLKDLKDFQKDGLTVQFSG-AVGNYCILTTE----DEKKAAD 200 (438)
T ss_dssp HHHHHHTTCEEEEEETTEEEEEEETHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCC-TTSCCSSSCHH----HHHHHHH
T ss_pred HHHHHhhCCcccccccCccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCcc-HhhCcccccHH----HHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999997 68999988764 4578999
Q ss_pred HhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcC--CCCCCCCCCCCCCChhHH
Q psy7883 257 LTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLP--ENEPGSSIMPGKVNPTQV 334 (607)
Q Consensus 257 ~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp--~~~~GSSiMPqKrNP~~~ 334 (607)
.|||+.. +++ +++++||++++++++++.++++|+|||+||++|++ +||||+.+| ++++|||||||||||+.+
T Consensus 201 ~LG~~~~--~~~-~~v~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~~---~e~gel~~~f~~~q~GSSiMP~K~NP~~~ 274 (438)
T 4eei_A 201 ILGLPVE--EVS-TQVIPRDRIAKLISIHGLIASAIERLAVEIRHLHR---SDVFEVYEGFSKGQKGSSTMPHKKNPIST 274 (438)
T ss_dssp HHTCCBC--SSC-SSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---TTTCSEECCC------------CCCCHHH
T ss_pred HcCCCCC--Ccc-ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccceeccccccCCCCCCCCCCCCCcHHH
Confidence 9999853 443 58999999999999999999999999999999994 799999998 568999999999999999
Q ss_pred HHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHhhhhhHhHH-
Q psy7883 335 EALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLV- 413 (607)
Q Consensus 335 E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~l~~~~~la- 413 (607)
|+++++|+++.|++.+. +.+.+.+||++...+...|.+++++..+.++++.++.+|++||+||+++|+++++.+++++
T Consensus 275 E~i~~~a~~v~g~~~~~-~~~~~~~~erdl~~~~~er~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~~~ 353 (438)
T 4eei_A 275 ENLTGMARMLRSHVSIA-LENCVLWHERDISHSSAERFYLPDNFGIMVYALRRMKNTIDNLVVQRDIIEDRVRSTSAYLS 353 (438)
T ss_dssp HHHHHHHHHHHHHHHHH-HHTTCCCTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHCCTTHH
T ss_pred HHHHHHHHHHHHHHHHH-HhccchhcCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccCHHH
Confidence 99999999999988543 5566778898887777678889999999999999999999999999999999999776553
Q ss_pred -Hh----hC-CCCCHHHHHHHHH----HHHHcCCCHHHHHHH
Q psy7883 414 -TA----LN-PHIGYDKAAEIAK----HAYKTGITLKEAAVK 445 (607)
Q Consensus 414 -t~----La-~~ig~~~Ah~ia~----~A~~~g~~l~e~l~~ 445 (607)
++ |. +++||++||+++. +|.+ |++|+|++.+
T Consensus 354 a~~~a~~Lv~~g~~~~~Ah~~v~~~~~~a~~-g~~l~e~~~~ 394 (438)
T 4eei_A 354 SFYLHFLVANTPFMREDCYKIVQQVAFDLKQ-GESFSKKLQK 394 (438)
T ss_dssp HHHHHHHHHHSSCCHHHHHHHHHHC--------CCHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-CCCHHHHHHH
Confidence 33 33 4799999999865 5677 9999996553
No 21
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A
Probab=100.00 E-value=1.8e-75 Score=641.64 Aligned_cols=418 Identities=16% Similarity=0.167 Sum_probs=353.8
Q ss_pred cCCCCCCchH--hhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CC------HHHHHHHHHHHHHHHcCcc
Q psy7883 18 VPNDKYYGAQ--TVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LD------SKIADTISKAADEVISGKL 88 (607)
Q Consensus 18 ~P~~~~yg~~--~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip------~e~a~~I~~al~~i~~~~~ 88 (607)
.|.+.+|+.. .++.+| ++++++++++++|+||+++|+++| || ++++++|.++|+++..+.+
T Consensus 10 s~~~gRy~~~~~~~~~~f----------sd~~~i~~~~~ve~A~a~ala~~g~i~~ip~i~~~~a~~I~~~~~~i~~g~~ 79 (462)
T 2ptr_A 10 SPVDGRYGDKVSALRGIF----------SEYGLLKFRVQVEVRWLQKLAAHAAIKEVPAFAADAIGYLDAIVASFSEEDA 79 (462)
T ss_dssp STTTTTTGGGSGGGGGTT----------SHHHHHHHHHHHHHHHHHHHHHCTTCTTSCCCCHHHHHHHHHHHHTCCHHHH
T ss_pred CcccccccCchHHHHHHC----------CcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHhccCCH
Confidence 4788899987 788888 799999999999999999999997 83 7999999999976543222
Q ss_pred ccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 89 YEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSL 168 (607)
Q Consensus 89 ~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L 168 (607)
+.++.+. +..+++|+++ +..+.+++|+ .|. ..|+++|||+|||||||++|+++|++|+.+.+.|.+.|
T Consensus 80 -------~~~~~~~-~~~~~dv~av-~~~l~e~~g~-~g~--~~~~~~~vH~g~SsnDv~~Ta~~L~lr~~l~~~l~~~L 147 (462)
T 2ptr_A 80 -------ARIKTIE-RTTNHDVKAV-EYFLKEKVAE-IPE--LHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYW 147 (462)
T ss_dssp -------HHHHHHH-HHHSCHHHHH-HHHHHHHHTT-SHH--HHTTGGGTTTTCCHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred -------HHHHhhc-cccCCCHHHH-HHHHHHHhcc-ccC--CcchhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222222 3446778775 4556788883 432 23788999999999999999999999998642599999
Q ss_pred HHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchh-
Q psy7883 169 QMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFA- 247 (607)
Q Consensus 169 ~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~- 247 (607)
..|+++|.++|++|+|++||||||+|+||||||||||++|+++|.||++||.+++ ..+++|| ||||+.+..+.|+
T Consensus 148 ~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~---~~~~~~G-AvGT~~~~~~~~~~ 223 (462)
T 2ptr_A 148 RQLIDGLKDLAVQYRDIPLLSRTAGQPATPSTIGKEMANVAYRMERQYRQLNQVE---ILGKING-AVGNYNAHIAAYPE 223 (462)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC---CEECCCC-TTSSCHHHHHHCTT
T ss_pred HHHHHHHHHHHHHccCCEeeccccCeeceechHHHHHHHHHHHHHHHHHHHHHHH---HHhccCc-hhcchhhcccccCc
Confidence 9999999999999999999999999999999999999999999999999999998 3777777 6899876666666
Q ss_pred ---HHHHHHHHHHhCCCCcCCCCchh-hhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCC
Q psy7883 248 ---ENCTQRISELTGLPFKSAPNKFE-ALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSS 323 (607)
Q Consensus 248 ---~~v~~~la~~LGl~~~~~~ns~d-a~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSS 323 (607)
.++.+.+++.|||. .|+++ ++++||++++++++++.++++|+|||+||++|+|+|+ |+| .+|++++|||
T Consensus 224 ~~~~~v~~~~~~~LGl~----~n~~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~s~~~--~~E-~~~~~~~GSS 296 (462)
T 2ptr_A 224 VDWHQFSEEFVTSLGIQ----WNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVWGYIALNH--FKQ-KTIAGEIGSS 296 (462)
T ss_dssp SCHHHHHHHHHHHTTCE----ECCCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--EEE-CCCTTCCSCS
T ss_pred ccHHHHHHHHHHHhCCC----CCchhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc--hhc-cCCCCCCcCC
Confidence 77889999999984 56788 5999999999999999999999999999999999763 666 4556799999
Q ss_pred CCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHH
Q psy7883 324 IMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIA 403 (607)
Q Consensus 324 iMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~ 403 (607)
||||||||+.+|.++++|+++.|+..+++.....+++|+|.+.+.+.+.++.++..+..++..+. .||+||+||++||+
T Consensus 297 iMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~erd~~~~~~~~~l~~~~~~~~~~l~~~~-~~l~gl~vn~e~m~ 375 (462)
T 2ptr_A 297 TMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQSTL-KGVSKLEVNRDHLL 375 (462)
T ss_dssp SCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTCCTHHHHHGGGHHHHHHHHHHHHHHHH-HHHHHEEECHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHHHHHHHHHHHHHH-HHHCcCEECHHHHH
Confidence 99999999999999999999999998887665557899999888877888899998887776555 89999999999999
Q ss_pred HhhhhhHhHHH-----hhCCCCCHHHHHHHHHHHHH----cCCCHHHHHHHcCCC--CHHHHhhhcCcccccCCCCCcc
Q psy7883 404 KHVNDSLMLVT-----ALNPHIGYDKAAEIAKHAYK----TGITLKEAAVKLGYL--TEQEYDQWVKPEKMLGPEYHPY 471 (607)
Q Consensus 404 ~~l~~~~~lat-----~La~~ig~~~Ah~ia~~A~~----~g~~l~e~l~~~~~L--s~eel~~lldP~~~vg~~~~~~ 471 (607)
++++.+++++| .|.+. ||++||++++++.. +|++|+|++.+.+.. .+++++ +|||.+|+|.++.++
T Consensus 376 ~~l~~~~~~~te~~~~~l~~~-G~~~A~~iv~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~l~-~ldp~~~~~~a~~~~ 452 (462)
T 2ptr_A 376 DELDHNWEVLAEPIQTVMRRY-GIEKPYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKARLK-AMTPANYIGRAITMV 452 (462)
T ss_dssp HHHTTCGGGGHHHHHHHHHHT-TCSSHHHHHHHC-----CCHHHHHHHHHTSSSCHHHHHHHH-TCCGGGCCTTHHHHH
T ss_pred HHHHcCCchHHHHHHHHHHhh-ChHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCCcccHHHHH-hCCHHHHhChHHHHH
Confidence 99999999888 55564 88999999998766 888999999876622 378899 999999999876543
No 22
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A*
Probab=100.00 E-value=2.5e-74 Score=637.53 Aligned_cols=422 Identities=18% Similarity=0.138 Sum_probs=349.4
Q ss_pred cCCCccccCCCCCCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC--CCHHHHHHHHHHHHHHHcCcc
Q psy7883 11 DSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG--LDSKIADTISKAADEVISGKL 88 (607)
Q Consensus 11 d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G--Ip~e~a~~I~~al~~i~~~~~ 88 (607)
+....+..|++.+|+.++|+++| +++++++.|+++|+|+++|++++| ||++++++|.++++++.....
T Consensus 30 ~~~~~~~spl~~ry~~~~m~~~f----------S~~~~~~~~~~~e~Ala~a~~~~Gl~i~~e~~~~I~~~l~~i~~~~~ 99 (503)
T 2j91_A 30 GSPDSYRSPLASRYASPEMCFVF----------SDRYKFRTWRQLWLWLAEAEQTLGLPITDEQIREMKSNLENIDFKMA 99 (503)
T ss_dssp CCTTSCCCHHHHTTSCHHHHHHT----------SHHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTTSSCCCHHHH
T ss_pred cCcccccCCcccccCCHHHHHHh----------ChhHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCHHHH
Confidence 34778999999999999999999 899999999999999999999999 899999999887643311000
Q ss_pred ccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 89 YEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSL 168 (607)
Q Consensus 89 ~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L 168 (607)
. . .....++|+|.. ++. +.+.+| +.|+ +||+|+||||+.+|+..|++|+.+. .|.+.|
T Consensus 100 -~-----~-~e~~~~hDV~a~----v~~-l~e~~g-~~~~--------~iH~G~TS~Di~dta~~L~lr~al~-~l~~~L 157 (503)
T 2j91_A 100 -A-----E-EEKRLRHDVMAH----VHT-FGHCCP-KAAG--------IIHLGATSCYVGDNTDLIILRNALD-LLLPKL 157 (503)
T ss_dssp -H-----H-HHHHHSCHHHHH----HHH-HHHHCT-TTGG--------GTTTTCCTHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred -h-----h-hhhhcCCcHHHH----HHH-HHHHhc-cccc--------cccCCCCHhhHHHHHHHHHHHHHHH-HHHHHH
Confidence 0 0 001134554443 553 677887 4444 4557999999999999999999875 699999
Q ss_pred HHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCC------CCC
Q psy7883 169 QMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTG------LNT 242 (607)
Q Consensus 169 ~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~------~~~ 242 (607)
..|+++|.++|++|++++||||||+|+||||||||+|++|+++|.||++||.+++++++.+++||+ +||+ ++.
T Consensus 158 ~~L~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~rd~~RL~~~~~~l~~lg~gG~-~GT~a~~~~~f~~ 236 (503)
T 2j91_A 158 ARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCLWIQDLCMDLQNLKRVRDDLRFRGVKGT-TGTQASFLQLFEG 236 (503)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCBCCSCCT-TSSCHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcCcEeeccccCccceecchHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-ccchhhhccccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999885 6998 666
Q ss_pred CcchhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCC--CCC
Q psy7883 243 YVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEP 320 (607)
Q Consensus 243 d~~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~--~~~ 320 (607)
|+....++.+++|+.|||+. +..|+. |+++||++++++++++.++++|+|||+||++|+| +|||.+|. +++
T Consensus 237 D~~~~~~v~~~~a~~LGl~~-~~~~s~-~~~~rd~~~e~~~~la~la~~L~kia~Dirll~s-----~~ei~ep~~~~q~ 309 (503)
T 2j91_A 237 DDHKVEQLDKMVTEKAGFKR-AFIITG-QTYTRKVDIEVLSVLASLGASVHKICTDIRLLAN-----LKEMEEPFEKQQI 309 (503)
T ss_dssp CHHHHHHHHHHHHHHTTCSC-BCSCCS-SSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HTSEECCC-----
T ss_pred chHHHHHHHHHHHHHhCCCC-CCCccc-ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cceeeccccCCCC
Confidence 66566788899999999995 445554 7999999999999999999999999999999995 89999994 589
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHH
Q psy7883 321 GSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNED 400 (607)
Q Consensus 321 GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~e 400 (607)
|||||||||||+.+|+++++|++++|++.+++......++|+|...+.+.+..+++++.+.++++.++.+|++||+||++
T Consensus 310 GSSiMP~K~NPv~~E~i~~~a~~v~g~~~~~~~~~~~~~~erd~~~s~~~~~~l~~~~~~~~~~l~~~~~~l~gL~vn~e 389 (503)
T 2j91_A 310 GSSAMPYKRNPMRSERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLAEAFLTADTILNTLQNISEGLVVYPK 389 (503)
T ss_dssp ------CCCCCHHHHHHHHHHHHHHHTTHHHHHHHHTCCTTCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSCEECHH
T ss_pred CCCCCccccCcHHHHHHHHHHHHHHHHHHHHHHHHccCcccccccchHHHHhhHHHHHHHHHHHHHHHHHHHcCCEECHH
Confidence 99999999999999999999999999998777666667899998888888889999999999999999999999999999
Q ss_pred HHHHhhhhhHhH-HHh-----hC-CCCCHHHHHHHHHH-HH------Hc---CCCHHHHHHHcCC--CCHHHHhhhcCcc
Q psy7883 401 TIAKHVNDSLML-VTA-----LN-PHIGYDKAAEIAKH-AY------KT---GITLKEAAVKLGY--LTEQEYDQWVKPE 461 (607)
Q Consensus 401 rm~~~l~~~~~l-at~-----La-~~ig~~~Ah~ia~~-A~------~~---g~~l~e~l~~~~~--Ls~eel~~lldP~ 461 (607)
+|+++++.++++ +|+ |. .+++|++||+++++ |. ++ +.+|.|.+..... +++++|+++|||.
T Consensus 390 rm~~~l~~s~~~~ate~v~~~lv~~G~~~~~Ah~~v~~~a~~~g~~V~~~~~~~~l~e~l~~~~~~~l~~eel~~~ldp~ 469 (503)
T 2j91_A 390 VIERRIRQELPFMATENIIMAMVKAGGSRQDCHEKIRVLSQQAASVVKQEGGDNDLIERIQVDAYFSPIHSQLDHLLDPS 469 (503)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHCGGGHHHHTTHHHHTCGG
T ss_pred HHHHHHHhccChHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHhcCcccCCCHHHHHHhcCHH
Confidence 999999988766 443 43 46999999998743 22 21 2467777776554 5688999999999
Q ss_pred cccCCCCCccc
Q psy7883 462 KMLGPEYHPYF 472 (607)
Q Consensus 462 ~~vg~~~~~~~ 472 (607)
+|+|.+++.+-
T Consensus 470 ~~~g~a~~~v~ 480 (503)
T 2j91_A 470 SFTGRASQQVQ 480 (503)
T ss_dssp GGSTTHHHHHH
T ss_pred HhCCcHHHHHH
Confidence 99998876543
No 23
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans}
Probab=100.00 E-value=3.6e-74 Score=633.96 Aligned_cols=418 Identities=15% Similarity=0.126 Sum_probs=329.6
Q ss_pred ccccCCCCCCchHh-hhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHHcCcccc
Q psy7883 15 ELEVPNDKYYGAQT-VRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG---LDSKIADTISKAADEVISGKLYE 90 (607)
Q Consensus 15 ~~~~P~~~~yg~~~-~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G---Ip~e~a~~I~~al~~i~~~~~~~ 90 (607)
.+..|++.+|++++ |+++| +++++++.|+++|+|++++++++| ||++++++|.++++++..... .
T Consensus 6 ~~~spl~~ry~~~~~m~~~f----------s~~~~~~~~~~~e~Ala~a~~~~Gl~~i~~~~~~~I~~~l~~i~~~~~-~ 74 (478)
T 1yis_A 6 KFESVLSTRYCKNSPLVSIL----------SETNKATLWRQLWIWLAEAEKELGLKQVTQDAIDEMKSNRDVFDWPFI-R 74 (478)
T ss_dssp SCCCHHHHTTTTTCTHHHHT----------SHHHHHHHHHHHHHHHHHHHHHTTCTTSCHHHHHHHHHTTTCCCHHHH-H
T ss_pred cCCCCcccccCChHHHHHHc----------CchHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhCCHHHH-h
Confidence 47899999999999 99999 899999999999999999999999 599999999987754321000 0
Q ss_pred CCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 91 DHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQM 170 (607)
Q Consensus 91 ~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~ 170 (607)
.+ . ...++|+|.. ++. +.+.+| +.|+ +||+|+||||+.+|+..|++|+.+. .|.+.|..
T Consensus 75 -~~----e-~~~~~DV~a~----v~~-l~e~~g-~~~~--------~iH~G~TS~Di~~ta~~L~lr~~l~-~l~~~L~~ 133 (478)
T 1yis_A 75 -SE----E-RKLKHDVMAH----NHA-FGKLCP-TAAG--------IIHLGATSCFVQDNADLIAYRDSID-HILKRFAT 133 (478)
T ss_dssp -HH----H-HHSSCHHHHH----HHH-HHHHCT-TTGG--------GTTTTCCHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred -hH----H-HhcCCcHHHH----HHH-HHHhhh-hchh--------heeCCCchhhhHHHHHHHHHHHHHH-HHHHHHHH
Confidence 00 0 1135665554 653 678887 4554 4556999999999999999999875 69999999
Q ss_pred HHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCC------CCCCc
Q psy7883 171 LHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTG------LNTYV 244 (607)
Q Consensus 171 L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~------~~~d~ 244 (607)
|+++|.++|++|+|++||||||+||||||||||+|++|+++|.||++||.++++++..+++||+ +||+ ++.|+
T Consensus 134 L~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~rd~~rL~~~~~~l~~lg~gg~-~GT~a~~~~~f~~d~ 212 (478)
T 1yis_A 134 VIDRLAAFSLKNKEVVTVGRTHYQTASLVTVGKRGVLWAQELLMAFQSLSEFRDKMRFRGIKGA-TGTQDSFLTLFAGDE 212 (478)
T ss_dssp HHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCBCCSCTT-TSSCHHHHHHTTTCH
T ss_pred HHHHHHHHHHHcCCCeeecccCCccceeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccch-hccchhhhcccCcch
Confidence 9999999999999999999999999999999999999999999999999999999999999886 6998 67777
Q ss_pred chhHHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCC--CCCCC
Q psy7883 245 GFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGS 322 (607)
Q Consensus 245 ~~~~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~--~~~GS 322 (607)
....++.+++++.|||+. +..|+. |+++||++++++++++.++++|+|||+||++|+| +||+.+|. +++||
T Consensus 213 ~~~~~v~~~~a~~LG~~~-~~~~s~-~~~~rd~~~e~~~~l~~~a~~L~kia~Di~ll~s-----~~el~~p~~~~q~GS 285 (478)
T 1yis_A 213 SKVEALDELVTKKANFSN-RFLITG-QTYSRQQDSQLVFSLSLLGAAAKKVCTDIRVLQA-----FGELLEPFEKDQIGS 285 (478)
T ss_dssp HHHHHHHHHHHHHTTCSC-BCSSCS-SSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TTSEECC--------
T ss_pred hhHHHHHHHHHHHhCcCC-CCCccc-cccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhheeccccCCCCcc
Confidence 666788899999999995 445654 8999999999999999999999999999999995 89999994 58999
Q ss_pred CCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHH
Q psy7883 323 SIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTI 402 (607)
Q Consensus 323 SiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm 402 (607)
|||||||||+.+|+++++|++++|++.+++......++|+|...+.+.+..+++++.+.++++.++.+|++||+||+++|
T Consensus 286 SiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~er~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm 365 (478)
T 1yis_A 286 SAMPYKKNPMKSERCCALSRKLINAPQEALTILADQGLERTLDDSAGRRMLIPDVLLTAEALLTTLQNIFEGLSVQTDNV 365 (478)
T ss_dssp -----CCCCHHHHHHHHHHHHHHTSHHHHHHHHHTCCTTCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHH
T ss_pred ccCCcccCCHHHHHHHHHHHHHHHhHHHHHHHhccCCcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHH
Confidence 99999999999999999999999999888776666789999888888888999999999999999999999999999999
Q ss_pred HHhhhhhHhH-HHh-----hC-CCCCHHHHHHHHHH--------HHHcCCCHHHHHHHcCC-CCHHHHhhhc-CcccccC
Q psy7883 403 AKHVNDSLML-VTA-----LN-PHIGYDKAAEIAKH--------AYKTGITLKEAAVKLGY-LTEQEYDQWV-KPEKMLG 465 (607)
Q Consensus 403 ~~~l~~~~~l-at~-----La-~~ig~~~Ah~ia~~--------A~~~g~~l~e~l~~~~~-Ls~eel~~ll-dP~~~vg 465 (607)
+++++.++++ +|+ |. .+++|++||+++++ +.++|+++.++..+.+. +++++++++| ||.+|+|
T Consensus 366 ~~~l~~~~~~~~te~v~~~l~~~G~~~~~Ah~~v~~~a~~~~~~v~~~g~~~~~l~~~~~~~l~~~el~~~l~dp~~~~g 445 (478)
T 1yis_A 366 KKIVEDEIAFLGLEKAMMMLTEEGVDRQQAHAVIRKTALEAKQLQATQKVDIRQTMADPFFDSVRDRVVGLVNNPINFTG 445 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHC---------------------------------CCCTTTTSTTTHHHHHHHHHCGGGGST
T ss_pred HHHHHhCCChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhcCCCCCCCHHHHHHHHhCHHHHcC
Confidence 9999998766 443 33 36888999998743 12577775443333333 7899999999 9999999
Q ss_pred CCCCccc
Q psy7883 466 PEYHPYF 472 (607)
Q Consensus 466 ~~~~~~~ 472 (607)
.+++.+.
T Consensus 446 ~a~~~v~ 452 (478)
T 1yis_A 446 RCVSQTE 452 (478)
T ss_dssp THHHHHH
T ss_pred cHHHHHH
Confidence 8876543
No 24
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A
Probab=100.00 E-value=8.9e-70 Score=578.52 Aligned_cols=348 Identities=21% Similarity=0.216 Sum_probs=286.9
Q ss_pred cccCCCC-CCchHhhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccccCCc
Q psy7883 16 LEVPNDK-YYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHF 93 (607)
Q Consensus 16 ~~~P~~~-~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip~e~a~~I~~al~~i~~~~~~~~~~ 93 (607)
+..|.-. ||++++|+.+| +++++|++|++||+|+|+||+++| ||++++++|.++|+++. |
T Consensus 6 ~~~~l~~~~~~~~~m~~~f----------s~~~~i~~~~~ve~A~a~a~~~~G~i~~~~a~~I~~~~~~i~--------~ 67 (359)
T 2fel_A 6 FEHPFLSGLFGDSEIIELF----------SAKADIDAMIRFETALAQAEAEASIFADDEAEAIVSGLSEFA--------A 67 (359)
T ss_dssp TSCTTTHHHHCCHHHHGGG----------SHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTCC--------C
T ss_pred ccccccccccCCHHHHHHc----------CcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHhcc--------c
Confidence 4455444 68999999999 899999999999999999999999 99999999999997652 1
Q ss_pred cccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7883 94 PLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHD 173 (607)
Q Consensus 94 ~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~L~~L~~ 173 (607)
+++.++.+.+++.| ++++++.+ +.+.+|++. ++|||+|+|||||++|+++|++|+.+. .|.+.|..|++
T Consensus 68 ~~~~~~~~~~~~~~-~~~~~~~~-l~~~~g~~~--------~~~vH~G~SsnDv~~Ta~~l~lr~~l~-~l~~~L~~l~~ 136 (359)
T 2fel_A 68 DMSALRHGVAKDGV-VVPELIRQ-MRAAVAGQA--------ADKVHFGATSQDVIDTSLMLRLKMAAE-IIATRLGHLID 136 (359)
T ss_dssp CHHHHHHHHHHHSS-SHHHHHHH-HHTTSCGGG--------GGGTTTTCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred cHHHHHhhccccCC-cHHHHHHH-HHHHcCccc--------cchhcCCCCHhhHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 22333333334444 56776544 556666433 447888999999999999999999875 69999999999
Q ss_pred HHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCcchhHHHHHH
Q psy7883 174 ALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQR 253 (607)
Q Consensus 174 ~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~~~~~~v~~~ 253 (607)
+|.++|++|+|++||||||+|+||||||||+|++|+++|.||++||.+++++++.+||||+ +||+.+ .+++++.++++
T Consensus 137 ~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGga-vGT~~~-~~~~~~~~~~~ 214 (359)
T 2fel_A 137 TLGDLASRDGHKPLTGYTRMQAAIGITVADRAAGWIAPLERHLLRLETFAQNGFALQFGGA-AGTLEK-LGDNAGAVRAD 214 (359)
T ss_dssp HHHHHHHHHTTSEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCSBCCCCCT-TSSCTT-TGGGHHHHHHH
T ss_pred HHHHHHHHhcCcEeeccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHH-hccCcc-CcchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999995 799654 46788899999
Q ss_pred HHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCCCCCCCCCChhH
Q psy7883 254 ISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIMPGKVNPTQ 333 (607)
Q Consensus 254 la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GSSiMPqKrNP~~ 333 (607)
+|+.|||+.++ +|+++||+++|++++++.++++|+|||+||++|+| +| ||+.+|. ++|||||||||||+.
T Consensus 215 ~a~~LG~~~~~-----~~~~~RD~~~e~~~~l~~~a~~L~kia~Dirll~s---~e-~Ei~~~~-~~GSS~MP~K~NP~~ 284 (359)
T 2fel_A 215 LAKRLGLADRP-----QWHNQRDGIAEFANLLSLVTGTLGKFGQDIALMAE---IG-SEIRLSG-GGGSSAMPHKQNPVN 284 (359)
T ss_dssp HHHHHTCBCCC-----CCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HC-TTEEEC-------------CCHH
T ss_pred HHHHhCcCCCc-----hHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CC-CeecCCC-CCCCccCCcccCCHH
Confidence 99999999743 47899999999999999999999999999999997 68 9999986 599999999999999
Q ss_pred HHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHh
Q psy7883 334 VEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKH 405 (607)
Q Consensus 334 ~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm~~~ 405 (607)
+|+|+++++++.|++.+++. ....|+|++...+...|..+++++.+.++++..+..+++||+||+++|..+
T Consensus 285 ~E~i~~~a~~v~~~~~~~~~-~~~~~~er~~~~~~~e~~~lp~~~~~~~~~L~~~~~v~~~l~v~~~~m~~~ 355 (359)
T 2fel_A 285 AETLVTLARFNAVQISALHQ-SLVQEQERSGAGWMLEWLTLPQMVTATGTSLLVAERLAAQIDRLGADESHH 355 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TTCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC-----
T ss_pred HHHHHHHHHHHHHHHHHHHH-HhhccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHhCcc
Confidence 99999999999999988764 445678887666666777899999999999999999999999999999753
No 25
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp}
Probab=100.00 E-value=3.3e-69 Score=591.51 Aligned_cols=417 Identities=17% Similarity=0.170 Sum_probs=323.1
Q ss_pred ccCCCCCCchH--hhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CC------HHHHHHHHHHHHHHHcCc
Q psy7883 17 EVPNDKYYGAQ--TVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LD------SKIADTISKAADEVISGK 87 (607)
Q Consensus 17 ~~P~~~~yg~~--~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-Ip------~e~a~~I~~al~~i~~~~ 87 (607)
..|.+.+|+.. +|+.+| ++++++++++++|.||++||+++| || ++++++|.+++.++..+.
T Consensus 12 ~s~~~gRy~~~~~~~~~~f----------sd~~~~~~~l~ve~a~~~ala~~~gi~~ip~i~~~~~~~i~~~~~~~~~~d 81 (459)
T 3bhg_A 12 ISPIDGRYVNKTRALSPYF----------SEFALTYYRLMVEIKWFESLAANDTIPEVPALDNKARKFLSDLISNFNESE 81 (459)
T ss_dssp SSTTTTTTHHHHGGGTTTS----------SHHHHHHHHHHHHHHHHHHHHTCTTCTTSCCCCHHHHHHHHHHHHTCCHHH
T ss_pred cCcccccccCChHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhcccc
Confidence 45888899987 799999 799999999999999999999995 73 789999999986542211
Q ss_pred cccCCccccccccCCCcccccchhHHHHHHHHHHhccCCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHH
Q psy7883 88 LYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCS 167 (607)
Q Consensus 88 ~~~~~~~~~~~~~~~~~di~~~vnevIe~~l~e~lG~~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L~~~ 167 (607)
+ . .+.......++|+ ++ ++..+.+.+|+ .|... ..+.|||+|||||||++|+++|++|+.+.+.|.+.
T Consensus 82 ~-~---~~~~~e~~~~~Dv-~a----~e~~l~e~~g~-~~~~~--~~~~~iH~g~SsnDv~~Ta~~L~lr~~l~~~l~~~ 149 (459)
T 3bhg_A 82 A-E---KIKEFEKQTNHDV-KA----VEYYLQDKFQE-NEQLK--SCVAFIHFACTSEDINNLAYALMIKQAIAQVIQPT 149 (459)
T ss_dssp H-H---HHHHHTTTCSSHH-HH----HHHHHHHHHTT-STTGG--GGGGGTTTTCCHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred H-H---HHHHHHHhcCCCh-HH----HHHHHHHHhcc-cccCc--hhhhhhcCCCCHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 1 0 0000111235564 44 78888899983 22100 12446778999999999999999999865369999
Q ss_pred HHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCc-ch
Q psy7883 168 LQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYV-GF 246 (607)
Q Consensus 168 L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~-~~ 246 (607)
|..|+++|.++|++|+|++||||||+||||||||||+|++|+++|.||++||.+++ .+++||||+|| ++... .|
T Consensus 150 L~~l~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~----~~~~~~GAvGT-~~a~~~~~ 224 (459)
T 3bhg_A 150 IAEIMGSITLLGKQHADVAMLSRTHGQPATPTTMGKELVNFVARLKRPQQQLAEVL----IPAKFNGAVGN-YNAHVAAY 224 (459)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC----CEECCCCSSSS-CHHHHHHC
T ss_pred HHHHHHHHHHHHHHccCCEeeccccCccceechHHHHHHHHHHHHHHHHHHHHHHH----Hhhcccccccc-cccccccc
Confidence 99999999999999999999999999999999999999999999999999999988 46666668899 54321 22
Q ss_pred h----HHHHHHHHHHhCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCCCCCC
Q psy7883 247 A----ENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGS 322 (607)
Q Consensus 247 ~----~~v~~~la~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~~~GS 322 (607)
+ +.+.+.+++.|||...+.++ ++++||++++++++++.++++|+|||+||++|+|+ |+.+...|++++||
T Consensus 225 ~~~~~~~~~~~~~~~LGl~~~~~~~---~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~---~~~~e~~~~~~~GS 298 (459)
T 3bhg_A 225 PEVDWRKHCANFVTSLGLSFNAYTT---QIEPHDGIAEVSQIMVRINNILLDYTQDIWSYISL---GYFKQKTIAEEVGS 298 (459)
T ss_dssp TTSCHHHHHHHHHHHTTCEECSSCS---SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TSEEECC------C
T ss_pred CcccHHHHHHHHHHHhCCCCCcccc---chhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---cceehccCCCCCCC
Confidence 2 45778888899998543332 68999999999999999999999999999999983 66443445679999
Q ss_pred CCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHH
Q psy7883 323 SIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTI 402 (607)
Q Consensus 323 SiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn~erm 402 (607)
|||||||||+.+|.++++++.+.|....++......+++++...+...+.++..+..+..+ +..+.++|+||+||+++|
T Consensus 299 SiMP~K~NP~~~e~~~g~~~l~~~~~~~~~~~l~~~~~~rdl~~s~~~r~l~~~~~~~~~~-l~~~~~~l~gl~vn~e~m 377 (459)
T 3bhg_A 299 STMPHKVNPIDFENAEGNLGLSNALFIHFANKLTQSRMQRDLSDSTVLRNLGVAFSYSLIA-YHSVAKGNDKLQINKSAL 377 (459)
T ss_dssp CSSCCCCCTHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTCCTHHHHHHTTHHHHHHHHHHH-HHHHHHHHTTEEECHHHH
T ss_pred CCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhhhhHHHHHHHHHHH-HHHHHHHHCcCEECHHHH
Confidence 9999999999999999999999998776655444456777765544445555555555543 455578999999999999
Q ss_pred HHhhhhhHhHH-----HhhCCCCCHHHHHHHHHHHHHcCC-----CHHHHHHHcCCCC---HHHHhhhcCcccccCCCCC
Q psy7883 403 AKHVNDSLMLV-----TALNPHIGYDKAAEIAKHAYKTGI-----TLKEAAVKLGYLT---EQEYDQWVKPEKMLGPEYH 469 (607)
Q Consensus 403 ~~~l~~~~~la-----t~La~~ig~~~Ah~ia~~A~~~g~-----~l~e~l~~~~~Ls---~eel~~lldP~~~vg~~~~ 469 (607)
+++++.+++++ +.|++. ||++||++++++.. |. +|+|.+.+.+ ++ .++|+ +|||.+|+|.++.
T Consensus 378 ~~~l~~~~~~~te~~~~~L~~~-G~~~A~~iv~~~~~-~~~~~~~~l~~~l~~l~-~~~~~~~~l~-~~dp~~y~g~a~~ 453 (459)
T 3bhg_A 378 QKDLSENWEVLAEAIQTVMRRY-NEPNAYEQLKELTR-GQMIDAENLKKFIKTLS-IPEEAKAELM-KLTPETYTGLATQ 453 (459)
T ss_dssp HHHHHTCGGGGHHHHHHHHHHT-TCTTHHHHHHHHHT-TSCCCHHHHHHHHHTSC-SCHHHHHHHH-HCCGGGCCTTHHH
T ss_pred HHHHHcCCchHHHHHHHHHHHh-ChHHHHHHHHHHHh-hcccccccHHHHHHhcC-CCchhHHHHH-hCCHHHHhCcHHH
Confidence 99999999887 455554 99999999999876 44 4777776644 33 46888 9999999998876
Q ss_pred cc
Q psy7883 470 PY 471 (607)
Q Consensus 470 ~~ 471 (607)
++
T Consensus 454 ~~ 455 (459)
T 3bhg_A 454 LV 455 (459)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 26
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A
Probab=100.00 E-value=7.1e-70 Score=597.69 Aligned_cols=415 Identities=17% Similarity=0.173 Sum_probs=321.5
Q ss_pred ccCCCCCCchH--hhhhcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHc-C-CCHHHHHHHHHHHHHHHcCccccCC
Q psy7883 17 EVPNDKYYGAQ--TVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGF-G-LDSKIADTISKAADEVISGKLYEDH 92 (607)
Q Consensus 17 ~~P~~~~yg~~--~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~-G-Ip~e~a~~I~~al~~i~~~~~~~~~ 92 (607)
..|.+.+|+.. .|+.+| ++++++++++++|+||++||+++ | ||++.+++|.+ +.++.+ ++..+.
T Consensus 8 ~s~~~gRy~~~~~~~~~~~----------sd~~~~~~~i~ve~A~~~ala~~~gii~~~~~~~i~~-l~~~~~-~~~~~d 75 (465)
T 2qga_B 8 ISPIDGRYKKACGELSAFF----------SEHALIKHRIIVEVRWLLFLNEEELFFEKVTDHSVEV-LNQIAT-NITDSD 75 (465)
T ss_dssp SSTTTTTTHHHHGGGGGTS----------SHHHHHHHHHHHHHHHHHHHHHHTSSSCCCCHHHHHH-HHHHHH-CCCHHH
T ss_pred cCcccccccCCcHHHHHHh----------CHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHH-HHHHHH-hhcccc
Confidence 35788899986 799998 79999999999999999999999 9 99999999975 333322 120001
Q ss_pred cc-ccccccCCCcccccchhHHHHHHHHHHhcc-------CCCCCCCCCCccCCCCCCChhhHHHHHHHHHHHHHHHHHH
Q psy7883 93 FP-LSIWQTGSGTQTNMNVNEVISNRAIEMLGG-------KLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRL 164 (607)
Q Consensus 93 ~~-~~~~~~~~~~di~~~vnevIe~~l~e~lG~-------~~g~~l~iH~~~~Vh~GrSrnDiv~Ta~~L~lr~~l~~~L 164 (607)
+. +........+|+ ++ ++..+++.+|. +.|+ |||+|+|||||++|+++|++|+.+.+.|
T Consensus 76 ~~~i~~~e~~~~hDV-~a----~e~~l~e~~g~~~~~~~~~~~~--------~iH~g~SsnDv~~Ta~~L~lr~~l~~~l 142 (465)
T 2qga_B 76 IARVKAIEEETNHDV-KA----VEYFVKEKLKNSKREDLLKIKE--------YVHYLCTSEDINNVAYATCLKACLNDVV 142 (465)
T ss_dssp HHHHHHHHHHHSCHH-HH----HHHHHHHHHHTSCCHHHHHHGG--------GTTTTCCHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHhhccCCCh-HH----HHHHHHHHhcccccccchhhhh--------hccCCCChhhHHHHHHHHHHHHHHHHHH
Confidence 11 100111135665 55 78888899972 2333 5667999999999999999999875369
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccccccccCcCCchhhHHHHHHHHHHHHHHHHHhhhhHHHhcCCccccccCCCCCCc
Q psy7883 165 LCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYV 244 (607)
Q Consensus 165 ~~~L~~L~~~L~~lA~~~~dt~m~GrTH~Q~AqPiTfG~~la~~a~~L~Rd~~RL~~~~~r~~~~pLGGaAvGT~~~~d~ 244 (607)
.+.|..|+++|.++|++|+|++||||||+||||||||||+|++|+++|.||++||.+++ .+++||||+|| ++...
T Consensus 143 ~~~L~~l~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~----~~~~~~GAvGT-~~a~~ 217 (465)
T 2qga_B 143 IPCLEKIMLKLKDLAVEYSHVPLLSRTHGQPASSTTFGKEMANFYARIHHHVGVIRRVK----VCAKFNGAVGN-FNAHK 217 (465)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHSC----CEECCCCTTSS-CHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCcEeeccccCcccccchHHHHHHHHHHHHHHHHHHHHHHH----HhccccchhcC-ccccc
Confidence 99999999999999999999999999999999999999999999999999999999988 57777778999 54221
Q ss_pred -chh----HHHHHHHHHH-hCCCCcCCCCchhhhhchhHHHHHHhHHHHHHHHHHHHHHHHHHHccCCCCceeeEEcCCC
Q psy7883 245 -GFA----ENCTQRISEL-TGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN 318 (607)
Q Consensus 245 -~~~----~~v~~~la~~-LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~Dl~llsS~pr~E~gev~lp~~ 318 (607)
.|+ ..+.+.+++. |||+.++.+ +++++||++++++++++.++++|+|||+||++|+|+ |+.+..+|++
T Consensus 218 ~~~p~~d~~~~~~~~~~~~LGl~~~~~~---~~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~---~~~~e~~~~~ 291 (465)
T 2qga_B 218 VASKDTDWVNTIGLFLKKHFNLTYSIYC---TQIQDHDYICELCDGLARANGTLIDLCVDIWLYISN---NLLKLKVKEK 291 (465)
T ss_dssp HHCTTCCHHHHHHHHHHHHHCCEECCCC---SSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TSEEEC----
T ss_pred cccCcccHHHHHHHHHHHHhCCCCCCCc---cchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---cceeeeCCCC
Confidence 111 2344555555 999865433 689999999999999999999999999999999983 6655445667
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHhhcchHHHHhcccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhhhccccC
Q psy7883 319 EPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPN 398 (607)
Q Consensus 319 ~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~ll~s~~~l~~~ll~~~~~vl~gL~Vn 398 (607)
++|||||||||||+.+|.++++++.+.|....++......++|++...+...+.++..+.....+ +..+.++|+||+||
T Consensus 292 ~~GSSiMP~K~NP~~~e~~~g~~~~~~~~~~~~~~~l~~~~~erdl~~s~~~r~l~~~~~~~~~~-l~~~~~~l~~l~vn 370 (465)
T 2qga_B 292 EVGSSTMPHKVNPIDFENAEGNLHIANAFFKLFSSKLPTSRLQRDLSDSTVLRNIGSSLAYCLIA-YKSVLKGLNKIDID 370 (465)
T ss_dssp ---CCSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTBCTHHHHHHTTHHHHHHHHHHH-HHHHHHHHHHEEEC
T ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhhhhHHHHHHHHHHH-HHHHHHHHccCEEC
Confidence 99999999999999999999999999998877765555667787765554445555555555443 34556899999999
Q ss_pred HHHHHHhhhhhHhHH-----HhhCCCCCHHHHHHHHHHHHHcCC-----CHHHHHHHcC-CCCH---HHHhhhcCccccc
Q psy7883 399 EDTIAKHVNDSLMLV-----TALNPHIGYDKAAEIAKHAYKTGI-----TLKEAAVKLG-YLTE---QEYDQWVKPEKML 464 (607)
Q Consensus 399 ~erm~~~l~~~~~la-----t~La~~ig~~~Ah~ia~~A~~~g~-----~l~e~l~~~~-~Ls~---eel~~lldP~~~v 464 (607)
+++|+++++.+++++ +.|.+. ||++||++++++.. +. +|.+.+.+.. .+++ ++|+ +|||.+|+
T Consensus 371 ~~~m~~~l~~~~~~~ae~v~~~L~~~-G~~~A~~iv~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~l~-~ldp~~y~ 447 (465)
T 2qga_B 371 RRNLEEELNQNWSTLAEPIQIVMKRH-NYVDAYEELKQFTR-GKVIDQKIMQEFIKTKCAFLPQDVVDQLL-ELTPATYT 447 (465)
T ss_dssp HHHHHHHHHTCGGGGHHHHHHHHHHT-TCSCHHHHHHHHHT-TSCCCHHHHHHHHHHHSTTSCHHHHHHHH-HCCGGGCC
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHh-ChHHHHHHHHHHHh-hhhhccCCHHHHHHhchhcCCcchHHHHH-hcCHHHhC
Confidence 999999999998875 566665 99999999998875 33 3556565553 4777 8998 99999999
Q ss_pred CCCCCcc
Q psy7883 465 GPEYHPY 471 (607)
Q Consensus 465 g~~~~~~ 471 (607)
|.+++.+
T Consensus 448 G~a~~~v 454 (465)
T 2qga_B 448 GYADYLA 454 (465)
T ss_dssp TTHHHHH
T ss_pred CcHHHHH
Confidence 9887654
No 27
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=20.90 E-value=58 Score=24.84 Aligned_cols=21 Identities=29% Similarity=0.416 Sum_probs=17.3
Q ss_pred CCHHHHHHHHHHHHH-HHcCcc
Q psy7883 68 LDSKIADTISKAADE-VISGKL 88 (607)
Q Consensus 68 Ip~e~a~~I~~al~~-i~~~~~ 88 (607)
++++.+++|.++|++ |..|.|
T Consensus 5 lt~eq~~aILkaLdeaIe~GPW 26 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEKGPW 26 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCT
T ss_pred hhHHHHHHHHHHHHHHHHcCCc
Confidence 788999999999998 445665
Done!