BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7885
(79 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q68FH4|GALK2_MOUSE N-acetylgalactosamine kinase OS=Mus musculus GN=Galk2 PE=1 SV=1
Length = 458
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKYDDYHSTVD 76
PGRVN+IGEHIDYC YSV PMA+EQ++L+A + + L L N D Y D+ +T +
Sbjct: 41 PGRVNIIGEHIDYCGYSVIPMAVEQDMLIAVEPVKTHTLQLANTDPL-YPDFSTTAN 96
>sp|Q5XIG6|GALK2_RAT N-acetylgalactosamine kinase OS=Rattus norvegicus GN=Galk2 PE=2
SV=1
Length = 458
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKYDDYHSTVD 76
PGRVN+IGEHIDYC YSV PMA+EQ++L+A + L L N D Y D+ +T +
Sbjct: 41 PGRVNIIGEHIDYCGYSVLPMAVEQDMLIAVGPVKTQTLQLANTDPL-YPDFSTTAN 96
>sp|Q01415|GALK2_HUMAN N-acetylgalactosamine kinase OS=Homo sapiens GN=GALK2 PE=1 SV=1
Length = 458
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKYDDYHSTVDTFR 79
PGRVN+IGEHIDYC YSV PMA+EQ++L+A + + L L N + Y D+ ++ + +
Sbjct: 41 PGRVNIIGEHIDYCGYSVLPMAVEQDVLIAVEPVKTYALQLANTNPL-YPDFSTSANNIQ 99
>sp|Q5R6J8|GALK2_PONAB N-acetylgalactosamine kinase OS=Pongo abelii GN=GALK2 PE=2 SV=1
Length = 458
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNID 64
PGRVN+IGEHIDYC YSV PMA+EQ++L+A + + L L N +
Sbjct: 41 PGRVNIIGEHIDYCGYSVLPMAVEQDVLIAVEPVKTYTLQLANTN 85
>sp|Q9SEE5|GALK1_ARATH Galactokinase OS=Arabidopsis thaliana GN=GAL1 PE=1 SV=2
Length = 496
Score = 59.3 bits (142), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAF-KCNENGDLNLYNIDDQ 66
PGRVNLIGEHIDY YSV PMA+ Q+ ++A KC + L + N++D+
Sbjct: 54 PGRVNLIGEHIDYEGYSVLPMAIRQDTIIAIRKCEDQKQLRIANVNDK 101
>sp|P09608|GAL1_KLULA Galactokinase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS
2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=GAL1 PE=2 SV=2
Length = 503
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 7/57 (12%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKC---NENGDLNLYNIDD----QKYD 69
PGRVNLIGEHIDYC++SV PMA+E ++++A + +EN + L N D +K+D
Sbjct: 41 PGRVNLIGEHIDYCQFSVLPMAIENDLMLACRLTSESENPSITLTNHDSNFAQRKFD 97
>sp|Q54DN6|GALK_DICDI Galactokinase OS=Dictyostelium discoideum GN=galK PE=3 SV=1
Length = 501
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 17 YSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNE--NGDLNLYNIDDQ 66
+ PGRVNLIGEH+DY Y V P ALEQ+ +VA N+ N +N++N +++
Sbjct: 49 FRAPGRVNLIGEHVDYSGYCVLPFALEQDTIVAVSFNKLNNDIINIHNCNEK 100
>sp|P04385|GAL1_YEAST Galactokinase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GAL1 PE=1 SV=4
Length = 528
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKC--NENGDLNLYNID----DQKYD 69
PGRVNLIGEHIDYC +SV P+A++ ++L A K +N + L N D +K+D
Sbjct: 51 PGRVNLIGEHIDYCDFSVLPLAIDFDMLCAVKVLNEKNPSITLINADPKFAQRKFD 106
>sp|P13045|GAL3_YEAST Protein GAL3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GAL3 PE=1 SV=2
Length = 520
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKC--NENGDLNLYNID 64
PGRVNLIGEHIDYC +SV P+A++ ++L A K +N + L N D
Sbjct: 45 PGRVNLIGEHIDYCDFSVLPLAIDVDMLCAVKILDEKNPSITLTNAD 91
>sp|O42821|GAL1_CANPA Galactokinase OS=Candida parapsilosis GN=GAL1 PE=3 SV=1
Length = 504
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKY 68
PGRVNLIG+HIDY + V PMA+E +++ A N N + + N D K+
Sbjct: 45 PGRVNLIGDHIDYNYFPVLPMAIEVDVVAAVSTNNNDMIVIANTDSAKF 93
>sp|P56599|GAL1_CANMA Galactokinase (Fragment) OS=Candida maltosa GN=GAL1 PE=3 SV=1
Length = 214
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 4 RVNLIGEHIDYCRYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNI 63
+ N G+ I + S PGRVNLIG+HIDY + V PMA+ +++ A N ++ + N
Sbjct: 30 QTNFPGDDITFFARS-PGRVNLIGDHIDYNFFPVLPMAIANDVIAAVNVNSTNEIIITNT 88
Query: 64 DDQKY 68
D + +
Sbjct: 89 DSKDF 93
>sp|Q9HDU2|GAL1_SCHPO Galactokinase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=gal1 PE=3 SV=1
Length = 519
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 34/47 (72%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQ 66
PGRVN+IGEHIDY +SV PMA++ +++V+ +++ + L N + +
Sbjct: 45 PGRVNIIGEHIDYNYFSVLPMAIDVDVIVSVTTSDDAKVELNNTNPE 91
>sp|P56091|GAL1_CANAX Galactokinase OS=Candida albicans GN=GAL1 PE=3 SV=1
Length = 515
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 6 NLIGEHIDYCRYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDD 65
N ID+ S PGRVNLIG+HIDY + V PMA+ +++VA N+ ++ + + D
Sbjct: 33 NFPNASIDFFARS-PGRVNLIGDHIDYNFFPVLPMAISADVIVAVNVNDEPEIVITHTDS 91
Query: 66 QKY 68
+ +
Sbjct: 92 KNF 94
>sp|B8GCS2|GAL1_CHLAD Galactokinase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485)
GN=galK PE=3 SV=1
Length = 390
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNI---DDQKYDDYHSTVD 76
PGRVNLIGEH DY V PMAL++ VA + ++ + ++++ D+ ++D H D
Sbjct: 26 PGRVNLIGEHTDYNDGFVFPMALDRATYVAARPRDDRIVRVFSVKFRDEDQFDLDHIVRD 85
Query: 77 TFR 79
T R
Sbjct: 86 TQR 88
>sp|A6H768|GALK1_BOVIN Galactokinase OS=Bos taurus GN=GALK1 PE=2 SV=2
Length = 392
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/26 (76%), Positives = 20/26 (76%)
Query: 18 SVPGRVNLIGEHIDYCRYSVCPMALE 43
S PGRVNLIGEH DY R V PMALE
Sbjct: 33 SAPGRVNLIGEHTDYNRGLVLPMALE 58
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 13/15 (86%)
Query: 2 PGRVNLIGEHIDYCR 16
PGRVNLIGEH DY R
Sbjct: 35 PGRVNLIGEHTDYNR 49
>sp|P94169|GAL1_ACTPL Galactokinase OS=Actinobacillus pleuropneumoniae GN=galK PE=3
SV=1
Length = 384
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 13 DYCRYSV------PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQ 66
++C YS PGRVN+IGEH DY V P A+ + V+F ++ +Y ID
Sbjct: 13 EHCGYSAAQTVFAPGRVNIIGEHTDYNDGFVMPCAINYGMAVSFSKRDDSVWRVYAIDID 72
Query: 67 KYDDY 71
+ D++
Sbjct: 73 EQDEF 77
>sp|Q9K3S8|GAL1_STRCO Galactokinase OS=Streptomyces coelicolor (strain ATCC BAA-471 /
A3(2) / M145) GN=galK PE=3 SV=1
Length = 387
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 17 YSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNID 64
++ PGRVNLIGEH DY V P AL + A ++G L L++ D
Sbjct: 25 WAAPGRVNLIGEHTDYNDGFVMPFALPHQAVAAVSRRDDGILRLHSAD 72
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 28 PGRVNLIGEHTDY 40
>sp|B0BPT5|GAL1_ACTPJ Galactokinase OS=Actinobacillus pleuropneumoniae serotype 3
(strain JL03) GN=galK PE=3 SV=1
Length = 384
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKYDDY 71
PGRVN+IGEH DY V P A+ + V+F ++ +Y ID + D++
Sbjct: 26 PGRVNIIGEHTDYNDGFVMPCAINYGMAVSFSKRDDSVWRVYAIDIDEQDEF 77
>sp|B9LFE4|GAL1_CHLSY Galactokinase OS=Chloroflexus aurantiacus (strain ATCC 29364 /
DSM 637 / Y-400-fl) GN=galK PE=3 SV=1
Length = 390
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNI---DDQKYD 69
PGRVNLIGEH DY V PMAL++ VA + + + +++I D+ ++D
Sbjct: 26 PGRVNLIGEHTDYNDGFVFPMALDRATYVAARPRNDQIVRVFSIKFRDEDQFD 78
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 26 PGRVNLIGEHTDY 38
>sp|A9WB97|GAL1_CHLAA Galactokinase OS=Chloroflexus aurantiacus (strain ATCC 29366 /
DSM 635 / J-10-fl) GN=galK PE=3 SV=1
Length = 390
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNI---DDQKYD 69
PGRVNLIGEH DY V PMAL++ VA + + + +++I D+ ++D
Sbjct: 26 PGRVNLIGEHTDYNDGFVFPMALDRATYVAARPRNDQIVRVFSIKFRDEDQFD 78
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 26 PGRVNLIGEHTDY 38
>sp|Q9R0N0|GALK1_MOUSE Galactokinase OS=Mus musculus GN=Galk1 PE=2 SV=1
Length = 391
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/26 (73%), Positives = 20/26 (76%)
Query: 18 SVPGRVNLIGEHIDYCRYSVCPMALE 43
S PGRVNLIGEH DY + V PMALE
Sbjct: 32 SAPGRVNLIGEHTDYNQGLVLPMALE 57
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 34 PGRVNLIGEHTDY 46
>sp|P51570|GALK1_HUMAN Galactokinase OS=Homo sapiens GN=GALK1 PE=1 SV=1
Length = 392
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/26 (73%), Positives = 20/26 (76%)
Query: 18 SVPGRVNLIGEHIDYCRYSVCPMALE 43
S PGRVNLIGEH DY + V PMALE
Sbjct: 33 SAPGRVNLIGEHTDYNQGLVLPMALE 58
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 35 PGRVNLIGEHTDY 47
>sp|Q9GKK4|GALK1_CANFA Galactokinase OS=Canis familiaris GN=GALK1 PE=2 SV=1
Length = 392
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/26 (73%), Positives = 20/26 (76%)
Query: 18 SVPGRVNLIGEHIDYCRYSVCPMALE 43
S PGRVNLIGEH DY + V PMALE
Sbjct: 33 SAPGRVNLIGEHTDYNQGLVLPMALE 58
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 35 PGRVNLIGEHTDY 47
>sp|A3N103|GAL1_ACTP2 Galactokinase OS=Actinobacillus pleuropneumoniae serotype 5b
(strain L20) GN=galK PE=3 SV=1
Length = 384
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKYDDY 71
PGRVN+IGEH DY V P A+ + V+F ++ +Y ID + D++
Sbjct: 26 PGRVNIIGEHTDYNDGFVMPCAINYGMAVSFSKRDDSVWRVYAIDIDEQDEF 77
>sp|B3H1M3|GAL1_ACTP7 Galactokinase OS=Actinobacillus pleuropneumoniae serotype 7
(strain AP76) GN=galK PE=3 SV=1
Length = 384
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKYDDY 71
PGRVN+IGEH DY V P A+ + V+F ++ +Y ID + D++
Sbjct: 26 PGRVNIIGEHTDYNDGFVMPCAINYGMAVSFSKRDDSVWRVYAIDIDEQDEF 77
>sp|O58107|GAL1_PYRHO Galactokinase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=galK PE=1
SV=1
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYN 62
PGRVNLIGEH DY V PMA+ N+ + ++G++ LY+
Sbjct: 7 PGRVNLIGEHTDYTYGYVMPMAI--NLYTKIEAEKHGEVILYS 47
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 16/25 (64%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 2 PGRVNLIGEHIDYCR-YSVPGRVNL 25
PGRVNLIGEH DY Y +P +NL
Sbjct: 7 PGRVNLIGEHTDYTYGYVMPMAINL 31
>sp|O84902|GAL1_LACCA Galactokinase OS=Lactobacillus casei GN=galK PE=3 SV=1
Length = 387
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 17 YSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKYDDYHSTVD 76
+ PGR+NLIGEH DY V P A+ A NE+ LY+ + Q+ S
Sbjct: 22 FFAPGRINLIGEHTDYNGGHVFPCAISLGTYAAVGTNEDNAFRLYSANFQRLALLTSIFG 81
Query: 77 TFR 79
+F+
Sbjct: 82 SFQ 84
>sp|P96910|GAL1_MYCTU Galactokinase OS=Mycobacterium tuberculosis GN=galK PE=3 SV=2
Length = 363
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 22/40 (55%)
Query: 17 YSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENG 56
Y PGRVNLIGEH DY P+AL + +V F G
Sbjct: 5 YGAPGRVNLIGEHTDYNLGFALPIALPRRTVVTFTPEHTG 44
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 8 PGRVNLIGEHTDY 20
>sp|A5U003|GAL1_MYCTA Galactokinase OS=Mycobacterium tuberculosis (strain ATCC 25177 /
H37Ra) GN=galK PE=3 SV=1
Length = 363
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 22/40 (55%)
Query: 17 YSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENG 56
Y PGRVNLIGEH DY P+AL + +V F G
Sbjct: 5 YGAPGRVNLIGEHTDYNLGFALPIALPRRTVVTFTPEHTG 44
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 8 PGRVNLIGEHTDY 20
>sp|C1AKV1|GAL1_MYCBT Galactokinase OS=Mycobacterium bovis (strain BCG / Tokyo 172 /
ATCC 35737 / TMC 1019) GN=galK PE=3 SV=1
Length = 363
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 22/40 (55%)
Query: 17 YSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENG 56
Y PGRVNLIGEH DY P+AL + +V F G
Sbjct: 5 YGAPGRVNLIGEHTDYNLGFALPIALPRRTVVTFTPEHTG 44
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 8 PGRVNLIGEHTDY 20
>sp|A1KG98|GAL1_MYCBP Galactokinase OS=Mycobacterium bovis (strain BCG / Pasteur
1173P2) GN=galK PE=3 SV=1
Length = 363
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 22/40 (55%)
Query: 17 YSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENG 56
Y PGRVNLIGEH DY P+AL + +V F G
Sbjct: 5 YGAPGRVNLIGEHTDYNLGFALPIALPRRTVVTFTPEHTG 44
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 8 PGRVNLIGEHTDY 20
>sp|Q7U1L7|GAL1_MYCBO Galactokinase OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=galK PE=3 SV=1
Length = 363
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 22/40 (55%)
Query: 17 YSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENG 56
Y PGRVNLIGEH DY P+AL + +V F G
Sbjct: 5 YGAPGRVNLIGEHTDYNLGFALPIALPRRTVVTFTPEHTG 44
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 8 PGRVNLIGEHTDY 20
>sp|P57899|GAL1_PASMU Galactokinase OS=Pasteurella multocida (strain Pm70) GN=galK PE=3
SV=1
Length = 385
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKYDDY 71
PGRVN+IGEH DY V P A+ ++ + ++ +Y D Q++D++
Sbjct: 26 PGRVNIIGEHTDYNDGFVMPCAINYGTAISGRKRDDSRFKVYAGDLQQWDEF 77
Score = 32.3 bits (72), Expect = 1.0, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 2 PGRVNLIGEHIDYCR-YSVPGRVN----LIGEHIDYCRYSVCPMALEQ 44
PGRVN+IGEH DY + +P +N + G D R+ V L+Q
Sbjct: 26 PGRVNIIGEHTDYNDGFVMPCAINYGTAISGRKRDDSRFKVYAGDLQQ 73
>sp|B4F0A6|GAL1_PROMH Galactokinase OS=Proteus mirabilis (strain HI4320) GN=galK PE=3
SV=1
Length = 390
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKYDDYHS 73
PGRVNLIGEH DY V P A++ ++VA ++ + + +D Q D S
Sbjct: 27 PGRVNLIGEHTDYNDGFVLPCAIDYQMVVAAAKRDDNLIRVIAVDYQNAQDQFS 80
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 27 PGRVNLIGEHTDY 39
>sp|Q896X8|GAL1_CLOTE Galactokinase OS=Clostridium tetani (strain Massachusetts / E88)
GN=galK PE=3 SV=1
Length = 392
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNL----------YNIDDQKYD 69
PGRVNLIGEHIDY V P AL L + ++ +NL N++D KY+
Sbjct: 32 PGRVNLIGEHIDYNGGHVFPCALNFGTLGCVRKRKDNKVNLASTNIPLKVSINLEDIKYE 91
Query: 70 DYH 72
H
Sbjct: 92 KKH 94
>sp|Q8DBN9|GAL1_VIBVU Galactokinase OS=Vibrio vulnificus (strain CMCP6) GN=galK PE=3
SV=1
Length = 386
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKYDDYHSTVDTF 78
PGRVNLIGEH DY V P A+ +VA E+ + + ++ DY + VD F
Sbjct: 27 PGRVNLIGEHTDYNDGFVLPCAINYQTVVAAAKREDNIVRVVSV------DYGNAVDEF 79
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 27 PGRVNLIGEHTDY 39
>sp|Q87M60|GAL1_VIBPA Galactokinase OS=Vibrio parahaemolyticus serotype O3:K6 (strain
RIMD 2210633) GN=galK PE=3 SV=1
Length = 386
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKYDDYHSTVDTF 78
PGRVNLIGEH DY V P A+ +VA E+ + + ++ DY + VD F
Sbjct: 27 PGRVNLIGEHTDYNDGFVLPCAINYQTVVAAAKREDNIVRVVSV------DYGNAVDEF 79
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 27 PGRVNLIGEHTDY 39
>sp|B8F7C7|GAL1_HAEPS Galactokinase OS=Haemophilus parasuis serovar 5 (strain SH0165)
GN=galK PE=3 SV=1
Length = 384
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKYDDY 71
PGRVN+IGEH DY V P A+ + V+F ++ +Y ID + D +
Sbjct: 26 PGRVNIIGEHTDYNDGFVMPCAINYGMSVSFAKRDDSIWRVYAIDINETDAF 77
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 11/13 (84%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVN+IGEH DY
Sbjct: 26 PGRVNIIGEHTDY 38
>sp|Q7MI80|GAL1_VIBVY Galactokinase OS=Vibrio vulnificus (strain YJ016) GN=galK PE=3
SV=1
Length = 386
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKYDDYHSTVDTF 78
PGRVNLIGEH DY V P A+ +VA E+ + + ++ DY + VD F
Sbjct: 27 PGRVNLIGEHTDYNDGFVLPCAINYQTVVAAAKREDNLVRVVSV------DYGNAVDEF 79
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 27 PGRVNLIGEHTDY 39
>sp|A7MV01|GAL1_VIBHB Galactokinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120)
GN=galK PE=3 SV=1
Length = 386
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKYDDYHSTVDTF 78
PGRVNLIGEH DY V P A+ +VA E+ + + ++ DY + VD F
Sbjct: 27 PGRVNLIGEHTDYNDGFVLPCAINYQTVVAAAKREDNLVRVVSV------DYGNAVDEF 79
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 27 PGRVNLIGEHTDY 39
>sp|B3W7I5|GAL1_LACCB Galactokinase OS=Lactobacillus casei (strain BL23) GN=galK PE=3
SV=1
Length = 388
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 24/46 (52%)
Query: 17 YSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYN 62
+ PGR+NLIGEH DY V P A+ A NE+ LY+
Sbjct: 22 FFAPGRINLIGEHTDYNGGHVFPCAISLGTYAAVGTNEDNAFRLYS 67
>sp|Q1WUZ4|GAL1_LACS1 Galactokinase OS=Lactobacillus salivarius (strain UCC118) GN=galK
PE=3 SV=1
Length = 387
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 13/75 (17%)
Query: 7 LIGEHIDYCRYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLY----- 61
+ GE + +S PGR+NLIGEH DY V P A+ A + E+ L Y
Sbjct: 13 IFGEQAEATFFS-PGRINLIGEHTDYNGGHVFPCAISLGTYGAARKREDNKLRFYSANFE 71
Query: 62 -------NIDDQKYD 69
++DD KYD
Sbjct: 72 DLGIIETSLDDLKYD 86
>sp|Q03BB8|GAL1_LACC3 Galactokinase OS=Lactobacillus casei (strain ATCC 334) GN=galK
PE=3 SV=1
Length = 388
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 24/46 (52%)
Query: 17 YSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYN 62
+ PGR+NLIGEH DY V P A+ A NE+ LY+
Sbjct: 22 FFAPGRINLIGEHTDYNGGHVFPCAISLGTYAAVGTNEDNAFRLYS 67
>sp|Q5JEK8|GAL1_PYRKO Galactokinase OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 /
JCM 12380 / KOD1) GN=galK PE=3 SV=1
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 16 RYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDL 58
R PGRVNLIGEH DY V PMA+++ ++ + +E +L
Sbjct: 2 RVYSPGRVNLIGEHTDYSYGYVLPMAIDRYTVIEGEPHERVEL 44
Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 15/43 (34%)
Query: 2 PGRVNLIGEHIDYC----------RYSV-----PGRVNLIGEH 29
PGRVNLIGEH DY RY+V RV L EH
Sbjct: 6 PGRVNLIGEHTDYSYGYVLPMAIDRYTVIEGEPHERVELYSEH 48
>sp|Q9KDV4|GAL1_BACHD Galactokinase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM
18197 / FERM 7344 / JCM 9153 / C-125) GN=galK PE=3 SV=1
Length = 395
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 17 YSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNL 60
+ PGRVNLIGEH DY V P AL + K ++G+ +L
Sbjct: 28 FFAPGRVNLIGEHTDYNGGYVFPGALTNGTYMVIKLRDDGEYHL 71
Score = 32.3 bits (72), Expect = 0.79, Method: Composition-based stats.
Identities = 15/21 (71%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Query: 2 PGRVNLIGEHIDY-CRYSVPG 21
PGRVNLIGEH DY Y PG
Sbjct: 31 PGRVNLIGEHTDYNGGYVFPG 51
>sp|Q8RHD0|GAL1_FUSNN Galactokinase OS=Fusobacterium nucleatum subsp. nucleatum (strain
ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) GN=galK
PE=3 SV=1
Length = 389
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 16 RYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYN 62
R+ PGRVNLIGEH DY V P AL+ K E+ +Y+
Sbjct: 21 RFFSPGRVNLIGEHTDYNGGFVFPCALDFGTYAVVKKREDKTFKMYS 67
Score = 32.7 bits (73), Expect = 0.75, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 2 PGRVNLIGEHIDY-CRYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNL 60
PGRVNLIGEH DY + P +D+ Y+V ++ + K EN +
Sbjct: 25 PGRVNLIGEHTDYNGGFVFPCA-------LDFGTYAVVKKREDKTFKMYSKNFENLGIIE 77
Query: 61 YNIDDQKYD 69
+N+D+ YD
Sbjct: 78 FNLDNLIYD 86
>sp|Q66D80|GAL1_YERPS Galactokinase OS=Yersinia pseudotuberculosis serotype I (strain
IP32953) GN=galK PE=3 SV=1
Length = 383
Score = 38.9 bits (89), Expect = 0.011, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKYDDYHSTVDTF 78
PGRVNLIGEH DY V P A+ +++ C + GD + I DY + D F
Sbjct: 26 PGRVNLIGEHTDYNDGFVLPCAINYETVIS--CGKRGDRQIRVI----AADYENQQDIF 78
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 26 PGRVNLIGEHTDY 38
>sp|B2K8R6|GAL1_YERPB Galactokinase OS=Yersinia pseudotuberculosis serotype IB (strain
PB1/+) GN=galK PE=3 SV=1
Length = 383
Score = 38.9 bits (89), Expect = 0.011, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKYDDYHSTVDTF 78
PGRVNLIGEH DY V P A+ +++ C + GD + I DY + D F
Sbjct: 26 PGRVNLIGEHTDYNDGFVLPCAINYETVIS--CGKRGDRQIRVI----AADYENQQDIF 78
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 26 PGRVNLIGEHTDY 38
>sp|Q9KRP1|GAL1_VIBCH Galactokinase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 /
El Tor Inaba N16961) GN=galK PE=3 SV=2
Length = 386
Score = 38.9 bits (89), Expect = 0.011, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNID-DQKYDDY 71
PGRVNLIGEH DY V P A+ +VA E+ + L +D D D++
Sbjct: 27 PGRVNLIGEHTDYNDGFVLPCAINYQTVVAAAKREDFLVRLVAVDYDNDTDEF 79
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 2 PGRVNLIGEHIDY 14
PGRVNLIGEH DY
Sbjct: 27 PGRVNLIGEHTDY 39
>sp|Q9HHB6|GAL1_PYRFU Galactokinase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM
3638 / JCM 8422 / Vc1) GN=galK PE=1 SV=1
Length = 352
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 16/24 (66%), Positives = 18/24 (75%)
Query: 20 PGRVNLIGEHIDYCRYSVCPMALE 43
PGRVNLIGEH DY V PMA++
Sbjct: 9 PGRVNLIGEHTDYTYGYVMPMAID 32
Score = 33.5 bits (75), Expect = 0.45, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 2 PGRVNLIGEHIDYCR-YSVPGRVNL 25
PGRVNLIGEH DY Y +P ++L
Sbjct: 9 PGRVNLIGEHTDYTYGYVMPMAIDL 33
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.144 0.459
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,494,168
Number of Sequences: 539616
Number of extensions: 1206964
Number of successful extensions: 3762
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3460
Number of HSP's gapped (non-prelim): 303
length of query: 79
length of database: 191,569,459
effective HSP length: 50
effective length of query: 29
effective length of database: 164,588,659
effective search space: 4773071111
effective search space used: 4773071111
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)