Query psy7885
Match_columns 79
No_of_seqs 119 out of 1063
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 21:17:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7885.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7885hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v2u_C Protein GAL3; rossmann 99.9 1.3E-22 4.4E-27 156.3 5.9 74 3-76 21-104 (520)
2 2a2c_A N-acetylgalactosamine k 99.6 1.3E-16 4.5E-21 120.4 6.1 73 3-76 37-116 (478)
3 3k85_A D-glycero-D-manno-hepto 99.6 1.9E-16 6.5E-21 115.7 6.1 53 15-67 4-62 (357)
4 1kvk_A MK, mevalonate kinase; 99.6 2.2E-15 7.6E-20 110.3 5.5 51 15-65 6-56 (395)
5 1wuu_A Galactokinase; galactos 99.5 3.7E-15 1.3E-19 109.4 4.7 64 3-66 18-88 (399)
6 1pie_A Galactokinase; galactos 99.5 9.3E-15 3.2E-19 108.0 6.3 62 4-65 30-99 (419)
7 3k17_A LIN0012 protein; protei 99.5 1.2E-14 4.2E-19 106.6 4.8 50 15-66 7-57 (365)
8 2pg9_A Phosphomevalonate kinas 99.4 2E-13 6.8E-18 98.9 5.5 49 15-65 4-53 (337)
9 4hac_A Mevalonate kinase; GHMP 99.2 6.2E-12 2.1E-16 90.4 5.4 48 15-64 22-69 (321)
10 2cz9_A Probable galactokinase; 99.2 2.9E-12 9.9E-17 91.3 3.3 48 16-63 3-50 (350)
11 1kkh_A Mevalonate kinase; mixe 99.2 2E-11 6.7E-16 86.3 5.5 51 15-65 6-56 (317)
12 2x7i_A Mevalonate kinase; tran 99.1 4.4E-11 1.5E-15 84.2 5.2 49 15-63 7-57 (308)
13 3gon_A Phosphomevalonate kinas 98.9 7.6E-10 2.6E-14 77.7 4.6 45 16-60 3-48 (335)
14 2hfs_A Mevalonate kinase, puta 98.9 1.7E-09 5.8E-14 76.8 4.1 48 15-62 14-62 (332)
15 2oi2_A Mevalonate kinase; enzy 98.8 3.8E-09 1.3E-13 73.3 4.1 46 15-61 6-52 (292)
16 2ww4_A 4-diphosphocytidyl-2C-m 98.6 1.8E-08 6E-13 71.3 4.0 46 17-62 5-55 (283)
17 2v8p_A 4-diphosphocytidyl-2-C- 98.2 1.2E-06 4.3E-11 60.9 3.7 44 16-62 6-54 (271)
18 3qt5_A Mevalonate diphosphate 98.1 1.7E-06 5.8E-11 62.6 3.3 35 15-49 10-44 (332)
19 2gs8_A Mevalonate pyrophosphat 98.0 2.2E-06 7.6E-11 60.7 1.8 35 15-49 9-43 (317)
20 1uek_A 4-(cytidine 5'-diphosph 97.4 0.00011 3.8E-09 50.9 3.5 35 17-52 4-43 (275)
21 1h72_C HK, homoserine kinase; 97.1 0.00044 1.5E-08 47.9 3.8 43 15-62 3-46 (296)
22 3pyf_A 4-diphosphocytidyl-2-C- 95.4 0.025 8.4E-07 40.2 5.1 48 15-62 6-58 (306)
23 1fi4_A Mevalonate 5-diphosphat 91.3 0.083 2.8E-06 39.0 1.8 27 15-41 26-52 (416)
24 2jmb_A AGR_L_42P, hypothetical 36.8 9 0.00031 22.7 0.4 16 20-35 38-53 (79)
25 1f35_A Olfactory marker protei 35.2 29 0.00098 22.8 2.7 19 15-33 69-87 (162)
26 3oon_A Outer membrane protein 24.1 40 0.0014 20.0 1.8 17 19-36 46-63 (123)
27 1o12_A N-acetylglucosamine-6-p 24.1 59 0.002 22.7 2.9 29 19-49 35-65 (376)
28 3ggm_A Uncharacterized protein 23.6 97 0.0033 16.8 3.6 20 30-49 52-71 (81)
29 3hul_A HSK, HK, homoserine kin 22.9 49 0.0017 22.8 2.3 41 16-62 4-44 (298)
30 1v4p_A Alanyl-tRNA synthetase; 21.3 1.1E+02 0.0039 18.7 3.7 25 22-46 104-129 (157)
31 2e1m_C L-glutamate oxidase; L- 20.5 29 0.00098 22.3 0.6 23 21-44 118-140 (181)
No 1
>3v2u_C Protein GAL3; rossmann fold, GHMP superfamily, transcription regulation, transcription; HET: GLA ATP; 2.10A {Saccharomyces cerevisiae} PDB: 3v5r_A 2aj4_A*
Probab=99.86 E-value=1.3e-22 Score=156.34 Aligned_cols=74 Identities=36% Similarity=0.609 Sum_probs=63.6
Q ss_pred hhhhhhhccee--E-----EEEcCCceEEEeeeccccCCceeeeeeccccEEEEEEeC--CCCcEEEEEcCCC-CcceEE
Q psy7885 3 GRVNLIGEHID--Y-----CRYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCN--ENGDLNLYNIDDQ-KYDDYH 72 (79)
Q Consensus 3 ~r~~~~~~~f~--y-----~~~~APGRvnliGeHtDy~gg~Vl~~Ai~~~~~v~~~~~--~d~~v~i~s~~~~-~~~~~~ 72 (79)
+||+++.+.|+ | .+++||||||||||||||+||+||||||+++++++++++ +|++++++|.+.+ +..+|+
T Consensus 21 ~R~~~l~~~F~~~fg~~p~~v~~APGRVnLiGEHtDyngG~VLp~AI~~~~~vav~~~~~~d~~i~i~S~~~~~~~~~~~ 100 (520)
T 3v2u_C 21 QKHLAVVDAFFQTYHVKPDFIARSPGRVNLIGEHIDYCDFSVLPLAIDVDMLCAVKILDEKNPSITLTNADPKFAQRKFD 100 (520)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEEEEEEEEEEECTTCGGGTCCBEEEEEEEEEEEEEEECCCSSCEEEEEESSTTSCCEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEcceeEEEeccCeeeCCCEEEEEEeecceEEEEEeccCCCCEEEEEECCCCCCceEEE
Confidence 49999999999 7 789999999999999999999999999999999999998 8899999998742 123455
Q ss_pred eecC
Q psy7885 73 STVD 76 (79)
Q Consensus 73 l~l~ 76 (79)
++++
T Consensus 101 l~~~ 104 (520)
T 3v2u_C 101 LPLD 104 (520)
T ss_dssp CCTT
T ss_pred eccC
Confidence 5333
No 2
>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A*
Probab=99.65 E-value=1.3e-16 Score=120.42 Aligned_cols=73 Identities=41% Similarity=0.721 Sum_probs=63.0
Q ss_pred hhhhhhhccee--E-----EEEcCCceEEEeeeccccCCceeeeeeccccEEEEEEeCCCCcEEEEEcCCCCcceEEeec
Q psy7885 3 GRVNLIGEHID--Y-----CRYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQKYDDYHSTV 75 (79)
Q Consensus 3 ~r~~~~~~~f~--y-----~~~~APGRvnliGeHtDy~gg~Vl~~Ai~~~~~v~~~~~~d~~v~i~s~~~~~~~~~~l~l 75 (79)
+||+++.+.|. | ++++||||+||+|||+||+||.||++||++++++++++++++.+++.+.+. ++..+++++
T Consensus 37 ~r~~~~~~~f~~~fg~~~~~~~~APgrv~L~Geh~D~~g~~vl~~AI~~~~~v~v~~~~~~~i~i~~~~~-~~~~~~~~~ 115 (478)
T 2a2c_A 37 PRLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIAVEPVKTYALQLANTNP-LYPDFSTSA 115 (478)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEEEEEEEEEEECTTCGGGTCCBEEEEEEEEEEEEEEECSSSCEEEEESST-TSCCEEECC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeceEEEEeccceeeCCCeEEEEEecccEEEEEEECCCCeEEEEECCC-CCcceeccc
Confidence 48999999999 7 789999999999999999999999999999999999998888899988765 233555544
Q ss_pred C
Q psy7885 76 D 76 (79)
Q Consensus 76 ~ 76 (79)
+
T Consensus 116 ~ 116 (478)
T 2a2c_A 116 N 116 (478)
T ss_dssp C
T ss_pred h
Confidence 4
No 3
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron}
Probab=99.64 E-value=1.9e-16 Score=115.74 Aligned_cols=53 Identities=17% Similarity=0.204 Sum_probs=49.0
Q ss_pred EEEcCCceEEEeeecccc------CCceeeeeeccccEEEEEEeCCCCcEEEEEcCCCC
Q psy7885 15 CRYSVPGRVNLIGEHIDY------CRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQK 67 (79)
Q Consensus 15 ~~~~APGRvnliGeHtDy------~gg~Vl~~Ai~~~~~v~~~~~~d~~v~i~s~~~~~ 67 (79)
+.++|||||||+|||||| +||.|||+||++++++++++++|+.+++.+.++++
T Consensus 4 i~~~APgRvnL~GehtD~~~~~~~~gG~vl~~AId~~~~v~i~~~~d~~i~i~s~~~~~ 62 (357)
T 3k85_A 4 VRSKAPLRLGLAGGGSDVSPYSDIYGGLILNATINLYAYCTIEETNSGRIEINAYDAQC 62 (357)
T ss_dssp EEEEEEEEEEEECTTTTSTTHHHHTCEEEEEEEEEEEEEEEEEECSSSEEEEEETTTTE
T ss_pred EEEECceEEEEecCCccCcchhhcCCCEEEEEEEeCcEEEEEEECCCCeEEEEECCCCc
Confidence 358999999999999999 99999999999999999999999999999987743
No 4
>1kvk_A MK, mevalonate kinase; RMK, ATP, GHMP, transferase; HET: ATP; 2.40A {Rattus norvegicus} SCOP: d.14.1.5 d.58.26.3 PDB: 2r42_A* 2r3v_A
Probab=99.57 E-value=2.2e-15 Score=110.28 Aligned_cols=51 Identities=25% Similarity=0.296 Sum_probs=47.4
Q ss_pred EEEcCCceEEEeeeccccCCceeeeeeccccEEEEEEeCCCCcEEEEEcCC
Q psy7885 15 CRYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDD 65 (79)
Q Consensus 15 ~~~~APGRvnliGeHtDy~gg~Vl~~Ai~~~~~v~~~~~~d~~v~i~s~~~ 65 (79)
+.++|||||||+|||+||+||.||++||++++++++++++++.+++.+.+.
T Consensus 6 ~~~~APgrv~L~Geh~d~~g~~~l~~ai~~~~~v~v~~~~~~~i~i~~~~~ 56 (395)
T 1kvk_A 6 LLVSAPGKVILHGEHAVVHGKVALAVALNLRTFLVLRPQSNGKVSLNLPNV 56 (395)
T ss_dssp EEEEEEEEEEEECTTGGGGTCCEEEEEEEEEEEEEEEECSSSEEEEEETTT
T ss_pred EEEEeCeEEEEecCCeeeECCEeeeeEeeccEEEEEEECCCCeEEEEcCCC
Confidence 358999999999999999999999999999999999999888999987765
No 5
>1wuu_A Galactokinase; galactosemia, GHMP superfamily, transferase; HET: GLA ANP; 2.50A {Homo sapiens} SCOP: d.14.1.5 d.58.26.7
Probab=99.54 E-value=3.7e-15 Score=109.38 Aligned_cols=64 Identities=33% Similarity=0.440 Sum_probs=58.0
Q ss_pred hhhhhhhccee--E-----EEEcCCceEEEeeeccccCCceeeeeeccccEEEEEEeCCCCcEEEEEcCCC
Q psy7885 3 GRVNLIGEHID--Y-----CRYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDDQ 66 (79)
Q Consensus 3 ~r~~~~~~~f~--y-----~~~~APGRvnliGeHtDy~gg~Vl~~Ai~~~~~v~~~~~~d~~v~i~s~~~~ 66 (79)
+|++++.+.|. | +.++||||+||+|||+||+||.+|++||++++++.+++++++.+++.+.+.+
T Consensus 18 ~~~~~~~~~f~~~~~~~~~~~~~APgkv~L~Geh~Dy~~~~~l~~ai~~~~~v~v~~~~~~~i~i~~~~~~ 88 (399)
T 1wuu_A 18 ELLAEARRAFREEFGAEPELAVSAPGRVNLIGEHTDYNQGLVLPMALELMTVLVGSPRKDGLVSLLTTSEG 88 (399)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEEEEEEEEEEECTTCGGGTCEEEEEEEEEEEEEEEEEETTCEEEEEECCSS
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeeeeEEEeccccccCCCEEEeEEecccEEEEEEECCCCeEEEEECCCC
Confidence 58888888888 6 6899999999999999999999999999999999999988888999887653
No 6
>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} SCOP: d.14.1.5 d.58.26.7
Probab=99.53 E-value=9.3e-15 Score=107.96 Aligned_cols=62 Identities=27% Similarity=0.436 Sum_probs=56.6
Q ss_pred hhhhhhccee--E------EEEcCCceEEEeeeccccCCceeeeeeccccEEEEEEeCCCCcEEEEEcCC
Q psy7885 4 RVNLIGEHID--Y------CRYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDD 65 (79)
Q Consensus 4 r~~~~~~~f~--y------~~~~APGRvnliGeHtDy~gg~Vl~~Ai~~~~~v~~~~~~d~~v~i~s~~~ 65 (79)
|++++.+.|. | +.++||||+||+|||+||+||.+|++||++++++.+++++++.+++.+.+.
T Consensus 30 ~~~~~~~~f~~~~g~~~~~~~~~APgkv~L~Geh~d~~G~~~l~~aI~l~~~v~v~~~~~~~i~i~~~~~ 99 (419)
T 1pie_A 30 VLSALTEKFAEVFGDTKEVEYFFSPGRINLIGEHTDYNGGYVFPASITIGTTGLARLREDKKVKLYSENF 99 (419)
T ss_dssp HHHHHHHHHHHHHSCCCSCEEEEEEEEEEEECCSCTTTTCEEEEEEEEEEEEEEEEECSSSEEEEEETTC
T ss_pred HHHHHHHHHHHHhCCCCceEEEEeeEEEEEcccceeeCCCEEEEEEEcccEEEEEEECCCCEEEEEECCC
Confidence 8888998898 7 578999999999999999999999999999999999998888889887664
No 7
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua}
Probab=99.50 E-value=1.2e-14 Score=106.64 Aligned_cols=50 Identities=16% Similarity=0.224 Sum_probs=43.8
Q ss_pred EEEcCCceEEEeeeccccC-CceeeeeeccccEEEEEEeCCCCcEEEEEcCCC
Q psy7885 15 CRYSVPGRVNLIGEHIDYC-RYSVCPMALEQNILVAFKCNENGDLNLYNIDDQ 66 (79)
Q Consensus 15 ~~~~APGRvnliGeHtDy~-gg~Vl~~Ai~~~~~v~~~~~~d~~v~i~s~~~~ 66 (79)
+.++||||++|+|||+||+ ||+|||+||+++++++++++++. ++.+..++
T Consensus 7 i~~~APGrv~L~GEh~~~~~g~~~l~~Ai~~~~~v~v~~~~~~--~i~s~~~~ 57 (365)
T 3k17_A 7 LQVKIPGKLYVAGEYAVVESGHTAILTAVNRYITLTLEDSERN--ELWIPHYE 57 (365)
T ss_dssp EEEEEEEEEEEECTTGGGSTTCEEEEEEEEEEEEEEEEECSSC--EEECTTCS
T ss_pred EEEEecceEEEecccEEecCCCEEEEEEccCcEEEEEEECCCc--EEEecCCC
Confidence 4589999999999999995 99999999999999999998776 56666653
No 8
>2pg9_A Phosphomevalonate kinase; GHMP kinase superfamily, transferase; HET: PMV ANP; 1.90A {Streptococcus pneumoniae} PDB: 1k47_A* 3gon_A*
Probab=99.41 E-value=2e-13 Score=98.92 Aligned_cols=49 Identities=8% Similarity=-0.042 Sum_probs=43.5
Q ss_pred EEEcCCceEEEeeecc-ccCCceeeeeeccccEEEEEEeCCCCcEEEEEcCC
Q psy7885 15 CRYSVPGRVNLIGEHI-DYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDD 65 (79)
Q Consensus 15 ~~~~APGRvnliGeHt-Dy~gg~Vl~~Ai~~~~~v~~~~~~d~~v~i~s~~~ 65 (79)
+.++||||+||+|||+ ||+||.||++||+++++++++++++ +++.+..+
T Consensus 4 i~~~aPgkv~L~GeH~v~y~G~~~l~~Ai~~~~~v~v~~~~~--~~i~s~~~ 53 (337)
T 2pg9_A 4 IAVKTCGKLYWAGEYAILEPGQLALIKDIPIYMRAEIAFSDS--YRIYSDMF 53 (337)
T ss_dssp EEEEEEEEEEEECTTGGGSTTCEEEEEEEEEEEEEEEEECSS--CEEEETTS
T ss_pred EEEeeCceEEEeccceEecCCCEEEEEEccccEEEEEEeCCc--EEEecCCC
Confidence 3589999999999999 8999999999999999999998753 78887655
No 9
>4hac_A Mevalonate kinase; GHMP, ATP binding, phosphorylation, transferase; 1.92A {Methanosarcina mazei}
Probab=99.25 E-value=6.2e-12 Score=90.40 Aligned_cols=48 Identities=23% Similarity=0.301 Sum_probs=43.0
Q ss_pred EEEcCCceEEEeeeccccCCceeeeeeccccEEEEEEeCCCCcEEEEEcC
Q psy7885 15 CRYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNID 64 (79)
Q Consensus 15 ~~~~APGRvnliGeHtDy~gg~Vl~~Ai~~~~~v~~~~~~d~~v~i~s~~ 64 (79)
+.++||||+||+|||+||+||.+|++||++++++.++++++ +++.+.+
T Consensus 22 i~~~APgkinL~GeH~~~~Gg~~l~~aI~~~~~v~v~~~~~--i~i~~~~ 69 (321)
T 4hac_A 22 VSCSAPGKIYLFGEHAVVYGETAIACAVELRTRVRAELNDS--ITIQSQI 69 (321)
T ss_dssp EEEEEEEEEEEECTTTGGGTCCEEEEEEEEEEEEEEEECSS--EEEEETT
T ss_pred EEEEeeEEEEEEccCEEEcCCEEEEEEeccCEEEEEEECCC--EEEEECC
Confidence 56899999999999999999999999999999999998643 8887754
No 10
>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A*
Probab=99.24 E-value=2.9e-12 Score=91.34 Aligned_cols=48 Identities=35% Similarity=0.438 Sum_probs=43.3
Q ss_pred EEcCCceEEEeeeccccCCceeeeeeccccEEEEEEeCCCCcEEEEEc
Q psy7885 16 RYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNI 63 (79)
Q Consensus 16 ~~~APGRvnliGeHtDy~gg~Vl~~Ai~~~~~v~~~~~~d~~v~i~s~ 63 (79)
.++||||+||+|||+||+||.+|++||++++++.+++++++.+++.+.
T Consensus 3 ~~~aP~ki~L~Ge~~d~~~~~~l~~ai~~~~~v~v~~~~~~~i~i~~~ 50 (350)
T 2cz9_A 3 KVKSPGRVNLIGEHTDYTYGYVMPMAINLYTKIEAEKHGEVILYSEHF 50 (350)
T ss_dssp EEEEEEEEEEECTTCGGGTCEEEEEEEEEEEEEEEEEESSEEEEETTT
T ss_pred EEEeccEEEEeecChhhCCCEEEEEEeeceEEEEEEECCCCeEEEEEC
Confidence 578999999999999999999999999999999999887767777544
No 11
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A
Probab=99.19 E-value=2e-11 Score=86.31 Aligned_cols=51 Identities=24% Similarity=0.296 Sum_probs=46.0
Q ss_pred EEEcCCceEEEeeeccccCCceeeeeeccccEEEEEEeCCCCcEEEEEcCC
Q psy7885 15 CRYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYNIDD 65 (79)
Q Consensus 15 ~~~~APGRvnliGeHtDy~gg~Vl~~Ai~~~~~v~~~~~~d~~v~i~s~~~ 65 (79)
+.++||||+||+|||+||+|+.+|++||++++++.+++++++.+++.+.+.
T Consensus 6 ~~~~APgki~L~geh~~~~G~~~l~~ai~~~~~v~v~~~~~~~i~i~~~~~ 56 (317)
T 1kkh_A 6 MIIETPSKVILFGEHAVVYGYRAISMAIDLTSTIEIKETQEDEIILNLNDL 56 (317)
T ss_dssp EEEEEEEEEEEECTTGGGGTCCEEEEEEEEEEEEEEEECCSSEEEEEETTT
T ss_pred EEEEccEEEEEEcCCeeEcCCEEEEEEecCeEEEEEEECCCCeEEEEeCCC
Confidence 357899999999999999999999999999999999998777888887654
No 12
>2x7i_A Mevalonate kinase; transferase; HET: CIT; 2.20A {Staphylococcus aureus}
Probab=99.14 E-value=4.4e-11 Score=84.18 Aligned_cols=49 Identities=20% Similarity=0.230 Sum_probs=42.6
Q ss_pred EEEcCCceEEEeeeccccCCceeeeeecccc-EEEEEEeCCCCc-EEEEEc
Q psy7885 15 CRYSVPGRVNLIGEHIDYCRYSVCPMALEQN-ILVAFKCNENGD-LNLYNI 63 (79)
Q Consensus 15 ~~~~APGRvnliGeHtDy~gg~Vl~~Ai~~~-~~v~~~~~~d~~-v~i~s~ 63 (79)
..++||||+||+|||+||+|+.+|++||++. +.+.+++++++. +++.+.
T Consensus 7 ~~~~APgkinL~Ge~~d~~g~~~l~~ai~~~~~~v~v~~~~~~~~i~~~~~ 57 (308)
T 2x7i_A 7 GYGESTGKIILIGEHAVTFGEPAIAVPFNAGKIKVLIEALESGNYSSIKSD 57 (308)
T ss_dssp EEEEEEEEEEEEEBTTCCTTSCEEEEEEEEEEEEEEEEECCTTCCCEEEEE
T ss_pred eEEEEeeEEEEEecCeeecCCeEEEEEEcCCEEEEEEEECCCCCeeEEEec
Confidence 3578999999999999999999999999985 889999887766 777654
No 13
>3gon_A Phosphomevalonate kinase; GHMP kinase superfamily, ATP-binding, nucleotide- binding, transferase; HET: PMV ANP; 1.90A {Streptococcus pneumoniae} PDB: 1k47_A
Probab=98.93 E-value=7.6e-10 Score=77.75 Aligned_cols=45 Identities=9% Similarity=-0.043 Sum_probs=39.5
Q ss_pred EEcCCceEEEeeec-cccCCceeeeeeccccEEEEEEeCCCCcEEE
Q psy7885 16 RYSVPGRVNLIGEH-IDYCRYSVCPMALEQNILVAFKCNENGDLNL 60 (79)
Q Consensus 16 ~~~APGRvnliGeH-tDy~gg~Vl~~Ai~~~~~v~~~~~~d~~v~i 60 (79)
.++|||++.|+||| ..|.|+++|++||++++++.++++++..+..
T Consensus 3 ~v~apGKviL~GEhaVv~~G~~Ala~ai~~~~~v~i~~~~~~~i~~ 48 (335)
T 3gon_A 3 AVKTCGKLYWAGEYAILEPGQLALIKDIPIYMRAEIAFSDSYRIYS 48 (335)
T ss_dssp EEEEEEEEEEECTTGGGSTTCEEEEEEEEEEEEEEEEECSSCEEEE
T ss_pred EEEECCEEEEEeeeeEEcCCCcEEEEEecceEEEEEEECCCCEEEE
Confidence 58999999999999 5666999999999999999999988765543
No 14
>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A*
Probab=98.85 E-value=1.7e-09 Score=76.76 Aligned_cols=48 Identities=17% Similarity=0.133 Sum_probs=41.2
Q ss_pred EEEcCCceEEEeeeccccCCceeeeeeccccEEEEEEeCC-CCcEEEEE
Q psy7885 15 CRYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNE-NGDLNLYN 62 (79)
Q Consensus 15 ~~~~APGRvnliGeHtDy~gg~Vl~~Ai~~~~~v~~~~~~-d~~v~i~s 62 (79)
+.++||||+||+|||.|++||.+|.+||++...+.+.+++ ++.+++.+
T Consensus 14 ~~~~ApgKi~L~Geh~~~~G~~~l~~ai~~~~~v~v~~~~~~~~~~~~~ 62 (332)
T 2hfs_A 14 GKNIGYGKVILFGEHFVVHGAEAIVAGISEYTECRLEINPGVPGLQVDD 62 (332)
T ss_dssp SCCEEEEEEEEECTTGGGGTCCEEEEEEEEEEEEEEEEETTCCSEEEEE
T ss_pred EEEEEeEEEEEecCCEEEcCCeEEEEEecccEEEEEEEcCCCCCeEEEe
Confidence 4578999999999999999999999999999999998864 45566643
No 15
>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae}
Probab=98.79 E-value=3.8e-09 Score=73.32 Aligned_cols=46 Identities=24% Similarity=0.301 Sum_probs=39.5
Q ss_pred EEEcCCceEEEeeeccccCCceeeeeec-cccEEEEEEeCCCCcEEEE
Q psy7885 15 CRYSVPGRVNLIGEHIDYCRYSVCPMAL-EQNILVAFKCNENGDLNLY 61 (79)
Q Consensus 15 ~~~~APGRvnliGeHtDy~gg~Vl~~Ai-~~~~~v~~~~~~d~~v~i~ 61 (79)
..++||||+||+|||+||+|+.+|++|| ++++.+.+++++ +.+++.
T Consensus 6 ~~~~aP~ki~L~Ge~~~~~g~~~l~~ai~~~~~~v~v~~~~-~~~~i~ 52 (292)
T 2oi2_A 6 GVGQAHSKIILIGEHAVVYGYPAISLPLLEVEVTCKVVPAE-SPWRLY 52 (292)
T ss_dssp EEEEEEEEEEEECTTGGGGTCCEEEEEEEEEEEEEEEEECS-SCCCCC
T ss_pred EEEEeeeEEEEEeCCeeecCCcEEEEEEcCcEEEEEEEECC-CceEEE
Confidence 3578999999999999999999999999 999999999864 344443
No 16
>2ww4_A 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; non-mevalonate pathway, isoprenoid biosynthesis, transferase; HET: ADP; 2.00A {Escherichia coli} PDB: 1oj4_A*
Probab=98.65 E-value=1.8e-08 Score=71.34 Aligned_cols=46 Identities=22% Similarity=0.460 Sum_probs=41.6
Q ss_pred EcCCceEEE----eeeccc-cCCceeeeeeccccEEEEEEeCCCCcEEEEE
Q psy7885 17 YSVPGRVNL----IGEHID-YCRYSVCPMALEQNILVAFKCNENGDLNLYN 62 (79)
Q Consensus 17 ~~APGRvnl----iGeHtD-y~gg~Vl~~Ai~~~~~v~~~~~~d~~v~i~s 62 (79)
++||||||| +|+|+| |+++.++++||++...+.+++++++.+++.+
T Consensus 5 ~~apaKinL~L~v~g~~~dGyh~l~sl~~ai~l~~~v~v~~~~~~~i~i~~ 55 (283)
T 2ww4_A 5 WPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLT 55 (283)
T ss_dssp EEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEEEEESSSCEEECS
T ss_pred ccCceeEEeeeeccCCCCCCCcceEEEEEECCCCcEEEEEECCCCcEEEEe
Confidence 579999999 899999 9999999999999999999988777787754
No 17
>2v8p_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; nucleotide-binding, isoprene biosynthesis, transferase, ATP-binding, non-mevalonate; HET: CDP ADP; 2.1A {Aquifex aeolicus} PDB: 2v2v_A* 2v2q_A* 2v34_A* 2v2z_A* 2vf3_A*
Probab=98.16 E-value=1.2e-06 Score=60.95 Aligned_cols=44 Identities=16% Similarity=0.218 Sum_probs=38.5
Q ss_pred EEcCCceEEE----eeeccc-cCCceeeeeeccccEEEEEEeCCCCcEEEEE
Q psy7885 16 RYSVPGRVNL----IGEHID-YCRYSVCPMALEQNILVAFKCNENGDLNLYN 62 (79)
Q Consensus 16 ~~~APGRvnl----iGeHtD-y~gg~Vl~~Ai~~~~~v~~~~~~d~~v~i~s 62 (79)
.++||||+|| +|+|.| |+++.++++||++...+ +++ ++.+++..
T Consensus 6 ~~~aPakinl~l~v~g~r~dgyh~~~sl~~ai~l~~~v-~~~--~~~i~i~~ 54 (271)
T 2v8p_A 6 KVLSPAKINLGLWVLGRLPSGYHEILTLYQEIPFYDEI-YIR--EGVLRVET 54 (271)
T ss_dssp EEEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEE-EEE--ESSCEEEE
T ss_pred EEeecceEEeeEeecccCCCCCceEEEEEEEcCcccEE-EEe--CCeEEEEe
Confidence 4789999999 899999 99999999999999999 887 44677765
No 18
>3qt5_A Mevalonate diphosphate decarboxylase; GHMP kinase family, lyase; 1.85A {Staphylococcus epidermidis} PDB: 3qt6_A* 3qt7_A* 4dpt_A* 4du7_A* 4dpu_A* 3qt8_A* 4dpx_A 4dpy_A* 4du8_A* 4dpw_A* 2hk2_A 2hk3_A
Probab=98.09 E-value=1.7e-06 Score=62.64 Aligned_cols=35 Identities=11% Similarity=0.034 Sum_probs=32.2
Q ss_pred EEEcCCceEEEeeeccccCCceeeeeeccccEEEE
Q psy7885 15 CRYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVA 49 (79)
Q Consensus 15 ~~~~APGRvnliGeHtDy~gg~Vl~~Ai~~~~~v~ 49 (79)
..++||+|++|||+|+||++|.+||+....++.+.
T Consensus 10 ~~~~ap~nialiky~gk~~~~~~lP~~dslglal~ 44 (332)
T 3qt5_A 10 GKARAHTNIALIKYWGKADETYIIPMNNSLSVTLD 44 (332)
T ss_dssp EEEEEEEEEEEECCCCEEETTTTEESSCEEEEEEE
T ss_pred EEEEecCcEEEEeeeeeccCCccccCCCceEEEec
Confidence 56899999999999999999999999999888776
No 19
>2gs8_A Mevalonate pyrophosphate decarboxylase; streptococcus pyogen structural genomics, PSI, protein structure initiative; HET: MSE; 1.50A {Streptococcus pyogenes m1 gas}
Probab=97.97 E-value=2.2e-06 Score=60.67 Aligned_cols=35 Identities=6% Similarity=-0.003 Sum_probs=30.6
Q ss_pred EEEcCCceEEEeeeccccCCceeeeeeccccEEEE
Q psy7885 15 CRYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVA 49 (79)
Q Consensus 15 ~~~~APGRvnliGeHtDy~gg~Vl~~Ai~~~~~v~ 49 (79)
..+.||||++|+|+|+||++|++||+.....+.+.
T Consensus 9 ~~~~ap~~i~l~~~~g~~~~g~~lp~~dslg~al~ 43 (317)
T 2gs8_A 9 ITVTSYANIAIIKYWGKENQAKMIPSTSSISLTLE 43 (317)
T ss_dssp EEEEEEEEEEEECCCCEEETTTTEESSCEEEEEEE
T ss_pred EEEEecCcEEEEeeeeeccCCcccCCCCceEEEee
Confidence 46899999999999999999999998887776664
No 20
>1uek_A 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase; non-mevalonate pathway, GHMP superfamily; 1.70A {Thermus thermophilus} SCOP: d.14.1.5 d.58.26.5
Probab=97.40 E-value=0.00011 Score=50.91 Aligned_cols=35 Identities=17% Similarity=0.125 Sum_probs=32.7
Q ss_pred EcCCceEEE----eeeccc-cCCceeeeeeccccEEEEEEe
Q psy7885 17 YSVPGRVNL----IGEHID-YCRYSVCPMALEQNILVAFKC 52 (79)
Q Consensus 17 ~~APGRvnl----iGeHtD-y~gg~Vl~~Ai~~~~~v~~~~ 52 (79)
+ ||||+|| +|+|.| |++..++.+||+++..+.+.+
T Consensus 4 ~-aPakinl~l~v~g~r~dgyh~~~sl~~ai~l~~~v~~~~ 43 (275)
T 1uek_A 4 L-APAKVNLGLSVRFRREDGYHELHTLFAPFSLADRLVVEP 43 (275)
T ss_dssp E-EEEEEEEEEEEEEECTTSSEEEEEEEEEEEEEEEEEEEE
T ss_pred e-ecCeEEEeeeecCcCCCCCceeeEEEEEcCCCCEEEEEE
Confidence 5 9999999 799999 999999999999999999887
No 21
>1h72_C HK, homoserine kinase; transferase, threonine biosynthesis; HET: ANP; 1.8A {Methanococcus jannaschii} SCOP: d.14.1.5 d.58.26.1 PDB: 1fwl_A 1fwk_A* 1h73_A* 1h74_A*
Probab=97.08 E-value=0.00044 Score=47.87 Aligned_cols=43 Identities=14% Similarity=0.242 Sum_probs=33.8
Q ss_pred EEEcCCceEEEeeeccccCCceeeeeeccc-cEEEEEEeCCCCcEEEEE
Q psy7885 15 CRYSVPGRVNLIGEHIDYCRYSVCPMALEQ-NILVAFKCNENGDLNLYN 62 (79)
Q Consensus 15 ~~~~APGRvnliGeHtDy~gg~Vl~~Ai~~-~~~v~~~~~~d~~v~i~s 62 (79)
+.++||+|++.+|++.| +|++|++. ...+.+.+++++.+++..
T Consensus 3 i~v~aPaki~nlG~g~~-----vl~~a~d~~~~~~~~~~~~~~~~~i~~ 46 (296)
T 1h72_C 3 VRVKAPCTSANLGVGFD-----VFGLCLKEPYDVIEVEAIDDKEIIIEV 46 (296)
T ss_dssp EEEEEEEEEECTGGGTT-----TEEEEEEEEEEEEEEEEESSSSEEEEE
T ss_pred EEEEEEeehhccccchh-----hhHHhcccccEEEEEEecCCCeEEEEE
Confidence 35789999999999877 99999998 556667766666677754
No 22
>3pyf_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; transferase; HET: ANP; 1.70A {Mycobacterium tuberculosis} PDB: 3pyd_A* 3pye_A* 3pyg_A* 4ed4_A* 4dxl_A* 4emd_A*
Probab=95.41 E-value=0.025 Score=40.18 Aligned_cols=48 Identities=25% Similarity=0.248 Sum_probs=40.5
Q ss_pred EEEcCCceEEE----eeeccc-cCCceeeeeeccccEEEEEEeCCCCcEEEEE
Q psy7885 15 CRYSVPGRVNL----IGEHID-YCRYSVCPMALEQNILVAFKCNENGDLNLYN 62 (79)
Q Consensus 15 ~~~~APGRvnl----iGeHtD-y~gg~Vl~~Ai~~~~~v~~~~~~d~~v~i~s 62 (79)
+.++||+++|| .|.+.| |+.--.+-+||++.-.+.+.+.++..+++..
T Consensus 6 ~~~~apAKiNL~L~v~~~r~DGyh~l~s~~~al~l~D~l~~~~~~~~~i~~~g 58 (306)
T 3pyf_A 6 VTVRVPGKVNLYLAVGDRREDGYHELTTVFHAVSLVDEVTVRNADVLSLELVG 58 (306)
T ss_dssp EEEEEEEEEEEEEEECCCCTTSCCCEEEEEEEEEEEEEEEEEECSSCEEEEES
T ss_pred EEEEecceEEeecccCCcCCCCCcchheeEEEcccCCEEEEEECCCCEEEEeC
Confidence 35789999999 999999 8888889999999988999887666666653
No 23
>1fi4_A Mevalonate 5-diphosphate decarboxylase; mixed alpha/beta structure, ATP binding, CHOL biosynthesis, structural genomics, PSI; 2.27A {Saccharomyces cerevisiae} SCOP: d.14.1.5 d.58.26.2
Probab=91.27 E-value=0.083 Score=39.05 Aligned_cols=27 Identities=7% Similarity=-0.063 Sum_probs=23.0
Q ss_pred EEEcCCceEEEeeeccccCCceeeeee
Q psy7885 15 CRYSVPGRVNLIGEHIDYCRYSVCPMA 41 (79)
Q Consensus 15 ~~~~APGRvnliGeHtDy~gg~Vl~~A 41 (79)
+.++||+|+.|++.|.+|.++..+|..
T Consensus 26 ~~~~Ap~nialik~~gkr~~~~~~P~~ 52 (416)
T 1fi4_A 26 ASVTAPVNIATLKYWGKRDTKLNLPTN 52 (416)
T ss_dssp EEEEECCEEEEECCCCEEETTTTEESS
T ss_pred EEEEecceEEEEecccccCCceecccc
Confidence 568999999999999999998865543
No 24
>2jmb_A AGR_L_42P, hypothetical protein ATU4866; structural genomics, ontario centre for structural proteomic unknown function; NMR {Agrobacterium tumefaciens str}
Probab=36.80 E-value=9 Score=22.68 Aligned_cols=16 Identities=38% Similarity=0.683 Sum_probs=13.6
Q ss_pred CceEEEeeeccccCCc
Q psy7885 20 PGRVNLIGEHIDYCRY 35 (79)
Q Consensus 20 PGRvnliGeHtDy~gg 35 (79)
-||-.+-|+|+||-.-
T Consensus 38 qGrY~v~G~~I~Y~DD 53 (79)
T 2jmb_A 38 QGRYEVRGAHINYWDD 53 (79)
T ss_dssp EEEEEEETTEEEEBCT
T ss_pred eEEEEEeCceEEEEcC
Confidence 5788899999999764
No 25
>1f35_A Olfactory marker protein; beta, structural genomics, PSI, protein structure initiative northeast structural genomics consortium, NESG, signaling P; 2.30A {Mus musculus} SCOP: b.94.1.1 PDB: 1job_A 1jod_A 1jyt_A 1zri_A
Probab=35.20 E-value=29 Score=22.76 Aligned_cols=19 Identities=21% Similarity=0.527 Sum_probs=14.7
Q ss_pred EEEcCCceEEEeeeccccC
Q psy7885 15 CRYSVPGRVNLIGEHIDYC 33 (79)
Q Consensus 15 ~~~~APGRvnliGeHtDy~ 33 (79)
+....||||++.|--+-+.
T Consensus 69 v~l~~pGkvtitgtsQ~WT 87 (162)
T 1f35_A 69 VVLDKPGKVTITGTSQNWT 87 (162)
T ss_dssp EEESSSEEEEEEEBCTTCC
T ss_pred EEEcCCCeEEEEeeccccC
Confidence 5667999999999765443
No 26
>3oon_A Outer membrane protein (TPN50); protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG; 1.79A {Borrelia burgdorferi}
Probab=24.12 E-value=40 Score=19.95 Aligned_cols=17 Identities=12% Similarity=0.204 Sum_probs=12.8
Q ss_pred CCc-eEEEeeeccccCCce
Q psy7885 19 VPG-RVNLIGEHIDYCRYS 36 (79)
Q Consensus 19 APG-RvnliGeHtDy~gg~ 36 (79)
-|+ ++.+.| |||-.|..
T Consensus 46 ~~~~~i~I~G-htD~~g~~ 63 (123)
T 3oon_A 46 FKKNNILIEG-HTEQFGLE 63 (123)
T ss_dssp SCSCCEEEEE-CCCSCCCH
T ss_pred CCCceEEEEE-EeCCCCCh
Confidence 476 777777 99988764
No 27
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=24.11 E-value=59 Score=22.70 Aligned_cols=29 Identities=17% Similarity=0.122 Sum_probs=24.5
Q ss_pred CCceEEEee--eccccCCceeeeeeccccEEEE
Q psy7885 19 VPGRVNLIG--EHIDYCRYSVCPMALEQNILVA 49 (79)
Q Consensus 19 APGRvnliG--eHtDy~gg~Vl~~Ai~~~~~v~ 49 (79)
.=||+.-+| + +| .|..++|.-||..+.+.
T Consensus 35 ~~g~I~~vg~~~-iD-~g~~v~PGlID~H~H~~ 65 (376)
T 1o12_A 35 EEGKIVKVEKRE-CI-PRGVLMPGFVDPHIHGV 65 (376)
T ss_dssp ETTEEEEEEECC-SC-CSSEEEECEEEEEECEE
T ss_pred ECCEEEEeCCCc-cC-CCCEEccCeEEEeecCC
Confidence 468888887 7 99 99999999999887764
No 28
>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian}
Probab=23.56 E-value=97 Score=16.76 Aligned_cols=20 Identities=30% Similarity=0.268 Sum_probs=15.2
Q ss_pred cccCCceeeeeeccccEEEE
Q psy7885 30 IDYCRYSVCPMALEQNILVA 49 (79)
Q Consensus 30 tDy~gg~Vl~~Ai~~~~~v~ 49 (79)
+|..|..++|.-||..+.+.
T Consensus 52 iD~~g~~v~PG~ID~H~H~~ 71 (81)
T 3ggm_A 52 IDLKRKRAIPGLNDSHIHVI 71 (81)
T ss_dssp EECTTCEEEECCCCTTEEEE
T ss_pred EECCCCEEeeCeEeeeeCCC
Confidence 57778888888888776654
No 29
>3hul_A HSK, HK, homoserine kinase; structural genomics, putative homoserine kinase, THRB, amino-acid biosynthesis, ATP-binding, cytoplasm; 2.19A {Listeria monocytogenes}
Probab=22.93 E-value=49 Score=22.78 Aligned_cols=41 Identities=17% Similarity=0.360 Sum_probs=31.1
Q ss_pred EEcCCceEEEeeeccccCCceeeeeeccccEEEEEEeCCCCcEEEEE
Q psy7885 16 RYSVPGRVNLIGEHIDYCRYSVCPMALEQNILVAFKCNENGDLNLYN 62 (79)
Q Consensus 16 ~~~APGRvnliGeHtDy~gg~Vl~~Ai~~~~~v~~~~~~d~~v~i~s 62 (79)
.+++|++.--+|. |.-+|-+||++.-.+.+.+. ++.+++..
T Consensus 4 ~v~vPat~anlG~-----Gfd~lg~al~l~d~v~~~~~-~~~~~i~~ 44 (298)
T 3hul_A 4 RIRVPATTANLGP-----GFDSCGLALTLYLTLDIGAE-ADSWYIEH 44 (298)
T ss_dssp EEEEEEEEESCTT-----CTTTEEEEEEEEEEEEEEEE-CSSCEEEC
T ss_pred EEEEeeceeccCC-----CcchhhhhcccceEEEEEEc-CCceEEEe
Confidence 5788998887776 78889999999988888753 34566653
No 30
>1v4p_A Alanyl-tRNA synthetase; alanine-tRNA ligase, riken structural genomics/proteomics initiative RSGI, structural genomics; 1.45A {Pyrococcus horikoshii} SCOP: d.67.1.2 PDB: 1wxo_A 1v7o_A 1wnu_A 3rhu_A 3rfn_A
Probab=21.34 E-value=1.1e+02 Score=18.65 Aligned_cols=25 Identities=16% Similarity=0.213 Sum_probs=20.6
Q ss_pred eEEEeeec-cccCCceeeeeeccccE
Q psy7885 22 RVNLIGEH-IDYCRYSVCPMALEQNI 46 (79)
Q Consensus 22 RvnliGeH-tDy~gg~Vl~~Ai~~~~ 46 (79)
|+-=+|+. .|+|+|+-++-.=....
T Consensus 104 rv~~ig~~~~~~C~GtHv~~Tg~I~~ 129 (157)
T 1v4p_A 104 KVVVIEDWNVNACNKEHTKTTGEIGP 129 (157)
T ss_dssp EEEEETTTEEEECCSCCCSBGGGTCC
T ss_pred EEEEECCeeEeCCCCCccCChhhcce
Confidence 66778999 99999999988776654
No 31
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=20.50 E-value=29 Score=22.32 Aligned_cols=23 Identities=30% Similarity=0.355 Sum_probs=16.2
Q ss_pred ceEEEeeeccccCCceeeeeeccc
Q psy7885 21 GRVNLIGEHIDYCRYSVCPMALEQ 44 (79)
Q Consensus 21 GRvnliGeHtDy~gg~Vl~~Ai~~ 44 (79)
|||-+.||||.+..| .+-.|+..
T Consensus 118 grl~FAGe~ts~~~g-~~eGAl~S 140 (181)
T 2e1m_C 118 GPVYFAGEHVSLKHA-WIEGAVET 140 (181)
T ss_dssp TTEEECSGGGTTSTT-SHHHHHHH
T ss_pred CcEEEEEHHHcCCcc-CHHHHHHH
Confidence 799999999996333 35555543
Done!