BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7886
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q01415|GALK2_HUMAN N-acetylgalactosamine kinase OS=Homo sapiens GN=GALK2 PE=1 SV=1
Length = 458
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 59/80 (73%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
+GT+GGGMDQ+I+FLA G AK I+F PLR+ DV LPS AVFV+A S NKA +S FN
Sbjct: 182 IGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFN 241
Query: 62 TRVVECRLSAKWIPHLQTPQ 81
RV+ECRL+AK + ++ Q
Sbjct: 242 IRVMECRLAAKLLAKYKSLQ 261
>sp|Q5R6J8|GALK2_PONAB N-acetylgalactosamine kinase OS=Pongo abelii GN=GALK2 PE=2 SV=1
Length = 458
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 59/80 (73%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
+GT+GGGMDQ+I+FLA G AK I+F PLR+ DV LPS AVFV+A S NKA +S FN
Sbjct: 182 IGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFN 241
Query: 62 TRVVECRLSAKWIPHLQTPQ 81
RV+ECRL+AK + ++ Q
Sbjct: 242 IRVMECRLAAKLLAKYKSLQ 261
>sp|Q5XIG6|GALK2_RAT N-acetylgalactosamine kinase OS=Rattus norvegicus GN=Galk2 PE=2
SV=1
Length = 458
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 55/71 (77%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
+GT+GGGMDQ+I+FLA G AK I+F PLR+ DV LPS AVFV+A S NKA +S FN
Sbjct: 182 IGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFN 241
Query: 62 TRVVECRLSAK 72
RV+ECRL+AK
Sbjct: 242 VRVMECRLAAK 252
>sp|Q68FH4|GALK2_MOUSE N-acetylgalactosamine kinase OS=Mus musculus GN=Galk2 PE=1 SV=1
Length = 458
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 55/71 (77%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
+GT+GGGMDQ+I+FLA G AK I+F PLR+ +V LPS AVFV+A S NKA +S FN
Sbjct: 182 IGTEGGGMDQSISFLAEEGTAKLIEFSPLRATNVKLPSGAVFVIANSCMEMNKAATSHFN 241
Query: 62 TRVVECRLSAK 72
RV+ECRL+AK
Sbjct: 242 VRVMECRLAAK 252
>sp|Q9SEE5|GALK1_ARATH Galactokinase OS=Arabidopsis thaliana GN=GAL1 PE=1 SV=2
Length = 496
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSS--E 59
+GTQ GGMDQAI+ +A G A+ I F+P+R+ DV LP FV+A SLA KA ++
Sbjct: 202 IGTQSGGMDQAISIMAKTGFAELIDFNPVRATDVKLPDGGSFVIAHSLAESQKAVTAAKN 261
Query: 60 FNTRVVECRLSA 71
+N RVVECRL++
Sbjct: 262 YNNRVVECRLAS 273
>sp|Q54DN6|GALK_DICDI Galactokinase OS=Dictyostelium discoideum GN=galK PE=3 SV=1
Length = 501
Score = 66.6 bits (161), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPSQAVFVVAQSLATKNK--AQSS 58
+G + GGMDQ+I+FLA AK I+FHP L++ DV LP FV+ SL K ++
Sbjct: 199 VGVESGGMDQSISFLAEQNTAKLIEFHPSLKTFDVQLPKGVSFVICNSLVDSLKVVTGAT 258
Query: 59 EFNTRVVECRLSA 71
+N RVVECRL+A
Sbjct: 259 NYNLRVVECRLAA 271
>sp|P09608|GAL1_KLULA Galactokinase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359
/ DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=GAL1
PE=2 SV=2
Length = 503
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPSQ--AVFVVAQSLATKNKAQSS 58
+G GGMDQA + G A +++F P L++ P F++A +L NKA++
Sbjct: 197 VGVNNGGMDQAASICGIEGHALYVEFKPELKATPFKFPEDLPISFLIANTLVVSNKAETG 256
Query: 59 --EFNTRVVECRLSA 71
+N RVVE ++A
Sbjct: 257 PVNYNLRVVEVTVAA 271
>sp|O42821|GAL1_CANPA Galactokinase OS=Candida parapsilosis GN=GAL1 PE=3 SV=1
Length = 504
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPSQAV-FVVAQSLATKNKAQSS- 58
LG GGMDQ + G A IQF P L+ P + + FV+ SL NK +++
Sbjct: 192 LGLNNGGMDQCASVYGEQGKALFIQFKPQLKGTPFEFPVKNLTFVITNSLQVSNKYETAP 251
Query: 59 -EFNTRVVE 66
+N RVVE
Sbjct: 252 IHYNLRVVE 260
>sp|P13045|GAL3_YEAST Protein GAL3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GAL3 PE=1 SV=2
Length = 520
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPS----QAVFVVAQSLATKNKAQ 56
+G GGMDQA + A +++F P L++ P + FV+A +L NK +
Sbjct: 201 VGVNNGGMDQATSVYGEEDHALYVEFRPKLKATPFKFPQLKNHEISFVIANTLVKSNKFE 260
Query: 57 S--SEFNTRVVECRLSAKWIPHLQTPQQSYIKINMKKRNFLKGSLQD 101
+ + +N RV+E ++A L T + + N +G+L+D
Sbjct: 261 TAPTNYNLRVIEVTVAAN---ALATRYSVALPSHKDNSNSERGNLRD 304
>sp|P56091|GAL1_CANAX Galactokinase OS=Candida albicans GN=GAL1 PE=3 SV=1
Length = 515
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPSQAV-FVVAQSLATKNKAQSS- 58
+G GGMDQ + P A IQF P L + P + + FV+ SL NK +++
Sbjct: 197 VGVNTGGMDQCASVYGEPDKALLIQFKPKLIGKPFKFPVENLTFVITNSLQVSNKHETAP 256
Query: 59 -EFNTRVVECRLSA 71
+N RVVE ++A
Sbjct: 257 IHYNLRVVEMAIAA 270
>sp|Q9HDU2|GAL1_SCHPO Galactokinase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=gal1 PE=3 SV=1
Length = 519
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSED-----VVLPSQAVFVVAQSLATKNKAQ 56
+G GGMDQ + A +QF P V+ P VF+++ +L NK +
Sbjct: 201 VGVNTGGMDQCASIYGEQNKALLVQFKPKLMATPFKMPVLKPHDMVFLISNTLVEANKQE 260
Query: 57 S--SEFNTRVVECRLSAKWIP---HLQTPQQS 83
+ + +N RVVE ++++++ +L+ P++S
Sbjct: 261 TALTNYNLRVVEMAVASEFLAKKFNLELPKES 292
>sp|P04385|GAL1_YEAST Galactokinase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GAL1 PE=1 SV=4
Length = 528
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPS----QAVFVVAQSLATKNKAQ 56
+G GGMDQA + A +++F P L++ P + FV+A +L NK +
Sbjct: 209 VGVNNGGMDQAASVCGEEDHALYVEFKPQLKATPFKFPQLKNHEISFVIANTLVVSNKFE 268
Query: 57 S--SEFNTRVVECRLSA 71
+ + +N RVVE +A
Sbjct: 269 TAPTNYNLRVVEVTTAA 285
>sp|Q9KRP1|GAL1_VIBCH Galactokinase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 /
El Tor Inaba N16961) GN=galK PE=3 SV=2
Length = 386
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
+G G MDQ I+ A + L++E V +P Q V+ S K SE+N
Sbjct: 167 VGCNCGIMDQMISAQGQANHAMLLDCRSLQTEAVAMPEQMAVVILNS-NKKRGLVESEYN 225
Query: 62 TRVVECRLSAK 72
TR +C +AK
Sbjct: 226 TRRQQCEAAAK 236
>sp|A7NI09|GAL1_ROSCS Galactokinase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8)
GN=galK PE=3 SV=1
Length = 391
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
+G Q G MDQ IA L A I L V LP V+ S + A S+ +N
Sbjct: 163 VGVQCGIMDQLIAVLGRADHALLIDCRDLSYRAVPLPPSVAVVICDSHIPRTLAASA-YN 221
Query: 62 TRVVECRLSA----KWIPHLQ 78
R EC ++ +W P ++
Sbjct: 222 QRRQECDMAVQLLRRWYPGIR 242
>sp|B2VBV2|GAL1_ERWT9 Galactokinase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99)
GN=galK PE=3 SV=1
Length = 382
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
+G G MDQ I+ L A + L + V +PS V+ + +N SE+N
Sbjct: 166 VGCHCGIMDQMISALGEKNSAMLLDCRTLDTRAVPMPSDIAVVIINTNFKRNLV-GSEYN 224
Query: 62 TRVVECRLSAKW 73
TR +C A++
Sbjct: 225 TRRQQCEAGARF 236
>sp|A1JRX5|GAL1_YERE8 Galactokinase OS=Yersinia enterocolitica serotype O:8 / biotype 1B
(strain 8081) GN=galK PE=3 SV=1
Length = 383
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L + V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGQQDHALLIDCRTLETRAVPMPENVAVVIINS-NVKRGLVDSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C +A++
Sbjct: 224 NTRRQQCETAARF 236
>sp|A4W899|GAL1_ENT38 Galactokinase OS=Enterobacter sp. (strain 638) GN=galK PE=3 SV=1
Length = 382
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V LP A V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKEHALLIDCRSLGTKAVPLPKGAAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKWIPHLQTPQQSYIKIN 88
NTR +C A++ Q P + +N
Sbjct: 224 NTRREQCETGARF---FQQPALRDVSLN 248
>sp|A5UZX0|GAL1_ROSS1 Galactokinase OS=Roseiflexus sp. (strain RS-1) GN=galK PE=3 SV=1
Length = 391
Score = 32.3 bits (72), Expect = 0.85, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
+G Q G MDQ IA A I L V LP VV S + A S+ +N
Sbjct: 163 VGVQCGIMDQLIAVFGRADHALLIDCRDLTYRAVPLPPSVAVVVCDSHIARTLAASA-YN 221
Query: 62 TRVVEC----RLSAKWIPHLQ 78
R EC R +W P ++
Sbjct: 222 QRRQECDAAVRALQQWYPGIR 242
>sp|P57899|GAL1_PASMU Galactokinase OS=Pasteurella multocida (strain Pm70) GN=galK PE=3
SV=1
Length = 385
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVV---LPSQAVFVVAQSLATKNKAQS 57
+G Q G MDQ I+ L G H+ RS + + +P+ ++ S K+ +
Sbjct: 165 FVGCQCGNMDQLISAL---GQKDHLLMIDCRSLETIPTPIPANVAVMIVNS-HVKHDLVA 220
Query: 58 SEFNTRVVECRLSAKW 73
E+NTR +C ++AK+
Sbjct: 221 GEYNTRRQQCEVAAKF 236
>sp|B4F0A6|GAL1_PROMH Galactokinase OS=Proteus mirabilis (strain HI4320) GN=galK PE=3
SV=1
Length = 390
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
+G G MDQ I+ A I L + V +P AV ++ S K SE+N
Sbjct: 167 VGCNCGIMDQLISACGEESHALLIDCRSLATTAVKMPESAVVMIINS-NKKRGLVDSEYN 225
Query: 62 TRVVECRLSAKWI 74
TR +C +AK +
Sbjct: 226 TRRQQCEEAAKIL 238
>sp|A7MIX5|GAL1_CROS8 Galactokinase OS=Cronobacter sakazakii (strain ATCC BAA-894)
GN=galK PE=3 SV=1
Length = 382
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
+G G MDQ I+ L A I L ++ V +P Q V VV + K SE+N
Sbjct: 166 VGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVPMP-QGVAVVIINSNFKRTLVGSEYN 224
Query: 62 TRVVECRLSAKW 73
TR +C A++
Sbjct: 225 TRREQCETGARF 236
>sp|A6VQK2|GAL1_ACTSZ Galactokinase OS=Actinobacillus succinogenes (strain ATCC 55618 /
130Z) GN=galK PE=3 SV=1
Length = 385
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVV---LPSQAVFVVAQSLATKNKAQS 57
+G G MDQ I+ L G A H+ RS + V +P ++ S K+ +
Sbjct: 165 FVGANCGNMDQLISAL---GQADHLLMIDCRSLETVPTPVPEDIAVMIVNS-HVKHDLVT 220
Query: 58 SEFNTRVVECRLSAKW 73
E+NTR +C +AK+
Sbjct: 221 GEYNTRRQQCETAAKF 236
>sp|A8GBA5|GAL1_SERP5 Galactokinase OS=Serratia proteamaculans (strain 568) GN=galK PE=3
SV=1
Length = 383
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
+G G MDQ I+ L A I L + V +P V+ S K SE+N
Sbjct: 166 VGCNCGIMDQLISALGEKDHALLIDCRTLETRAVSVPEDIAVVIINS-NVKRGLVDSEYN 224
Query: 62 TRVVECRLSAKW 73
TR +C +A++
Sbjct: 225 TRREQCEEAARF 236
>sp|Q8VYG2|GALAK_ARATH Galacturonokinase OS=Arabidopsis thaliana GN=GALAK PE=1 SV=1
Length = 424
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPS-QAVFVVAQSLATKNKAQSSE- 59
LG + G +DQ+ L++ GC ++ L E V P + F + + + +A ++
Sbjct: 189 LGLRNGILDQSAILLSNYGCLTYMDCKTLDHELVQAPELEKPFRILLAFSGLRQALTTNP 248
Query: 60 -FNTRVVECRLSAK 72
+N RV EC+ +AK
Sbjct: 249 GYNLRVSECQEAAK 262
>sp|B1JST8|GAL1_YERPY Galactokinase OS=Yersinia pseudotuberculosis serotype O:3 (strain
YPIII) GN=galK PE=3 SV=1
Length = 383
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L + V +P V+ S + SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRTLETRAVPMPENMAVVIINSNIQRGLV-DSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C +A++
Sbjct: 224 NTRRQQCEAAARF 236
>sp|A4TNR8|GAL1_YERPP Galactokinase OS=Yersinia pestis (strain Pestoides F) GN=galK PE=3
SV=1
Length = 383
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L + V +P V+ S + SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRTLETRAVPMPENMAVVIINSNIQRGLV-DSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C +A++
Sbjct: 224 NTRRQQCEAAARF 236
>sp|Q1CFP0|GAL1_YERPN Galactokinase OS=Yersinia pestis bv. Antiqua (strain Nepal516)
GN=galK PE=3 SV=1
Length = 383
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L + V +P V+ S + SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRTLETRAVPMPENMAVVIINSNIQRGLV-DSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C +A++
Sbjct: 224 NTRRQQCEAAARF 236
>sp|A9R3B5|GAL1_YERPG Galactokinase OS=Yersinia pestis bv. Antiqua (strain Angola)
GN=galK PE=3 SV=1
Length = 383
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L + V +P V+ S + SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRTLETRAVPMPENMAVVIINSNIQRGLV-DSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C +A++
Sbjct: 224 NTRRQQCEAAARF 236
>sp|Q8ZGY3|GAL1_YERPE Galactokinase OS=Yersinia pestis GN=galK PE=3 SV=1
Length = 383
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L + V +P V+ S + SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRTLETRAVPMPENMAVVIINSNIQRGLV-DSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C +A++
Sbjct: 224 NTRRQQCEAAARF 236
>sp|Q1C960|GAL1_YERPA Galactokinase OS=Yersinia pestis bv. Antiqua (strain Antiqua)
GN=galK PE=3 SV=1
Length = 383
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L + V +P V+ S + SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRTLETRAVPMPENMAVVIINSNIQRGLV-DSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C +A++
Sbjct: 224 NTRRQQCEAAARF 236
>sp|A7FKP2|GAL1_YERP3 Galactokinase OS=Yersinia pseudotuberculosis serotype O:1b (strain
IP 31758) GN=galK PE=3 SV=1
Length = 383
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L + V +P V+ S + SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRTLETRAVPMPENMAVVIINSNIQRGLV-DSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C +A++
Sbjct: 224 NTRRQQCEAAARF 236
>sp|Q66D80|GAL1_YERPS Galactokinase OS=Yersinia pseudotuberculosis serotype I (strain
IP32953) GN=galK PE=3 SV=1
Length = 383
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L + V +P V+ S + SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRTLETRAVPMPENMAVVIINSNIQRGLV-DSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C +A++
Sbjct: 224 NTRRQQCEAAARF 236
>sp|B2K8R6|GAL1_YERPB Galactokinase OS=Yersinia pseudotuberculosis serotype IB (strain
PB1/+) GN=galK PE=3 SV=1
Length = 383
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L + V +P V+ S + SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRTLETRAVPMPENMAVVIINSNIQRGLV-DSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C +A++
Sbjct: 224 NTRRQQCEAAARF 236
>sp|B7LK02|GAL1_ESCF3 Galactokinase OS=Escherichia fergusonii (strain ATCC 35469 / DSM
13698 / CDC 0568-73) GN=galK PE=3 SV=1
Length = 382
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKNHALLIDCRSLGTKAVSMPKGVAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C A++
Sbjct: 224 NTRREQCETGARF 236
>sp|Q0T6Y7|GAL1_SHIF8 Galactokinase OS=Shigella flexneri serotype 5b (strain 8401)
GN=galK PE=3 SV=1
Length = 382
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C A++
Sbjct: 224 NTRREQCETGARF 236
>sp|Q3Z453|GAL1_SHISS Galactokinase OS=Shigella sonnei (strain Ss046) GN=galK PE=3 SV=1
Length = 382
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C A++
Sbjct: 224 NTRREQCETGARF 236
>sp|Q83M01|GAL1_SHIFL Galactokinase OS=Shigella flexneri GN=galK PE=3 SV=3
Length = 382
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C A++
Sbjct: 224 NTRREQCETGARF 236
>sp|B7NNH9|GAL1_ECO7I Galactokinase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC)
GN=galK PE=3 SV=1
Length = 382
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C A++
Sbjct: 224 NTRREQCETGARF 236
>sp|A7ZY13|GAL1_ECOHS Galactokinase OS=Escherichia coli O9:H4 (strain HS) GN=galK PE=3
SV=1
Length = 382
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C A++
Sbjct: 224 NTRREQCETGARF 236
>sp|Q32IG8|GAL1_SHIDS Galactokinase OS=Shigella dysenteriae serotype 1 (strain Sd197)
GN=galK PE=3 SV=1
Length = 382
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C A++
Sbjct: 224 NTRREQCETGARF 236
>sp|Q324G2|GAL1_SHIBS Galactokinase OS=Shigella boydii serotype 4 (strain Sb227) GN=galK
PE=3 SV=1
Length = 382
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C A++
Sbjct: 224 NTRREQCETGARF 236
>sp|B7N9Z9|GAL1_ECOLU Galactokinase OS=Escherichia coli O17:K52:H18 (strain UMN026 /
ExPEC) GN=galK PE=3 SV=1
Length = 382
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C A++
Sbjct: 224 NTRREQCETGARF 236
>sp|B7MPP1|GAL1_ECO81 Galactokinase OS=Escherichia coli O81 (strain ED1a) GN=galK PE=3
SV=1
Length = 382
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C A++
Sbjct: 224 NTRREQCETGARF 236
>sp|B7ULN0|GAL1_ECO27 Galactokinase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC)
GN=galK PE=3 SV=1
Length = 382
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C A++
Sbjct: 224 NTRREQCETGARF 236
>sp|A8AJ37|GAL1_CITK8 Galactokinase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC
4225-83 / SGSC4696) GN=galK PE=3 SV=1
Length = 382
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRTLGTKAVSMPEGVAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C A++
Sbjct: 224 NTRREQCETGARF 236
>sp|B1LM48|GAL1_ECOSM Galactokinase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=galK
PE=3 SV=1
Length = 382
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C A++
Sbjct: 224 NTRREQCETGARF 236
>sp|B6I7R1|GAL1_ECOSE Galactokinase OS=Escherichia coli (strain SE11) GN=galK PE=3 SV=1
Length = 382
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C A++
Sbjct: 224 NTRREQCETGARF 236
>sp|P0A6T3|GAL1_ECOLI Galactokinase OS=Escherichia coli (strain K12) GN=galK PE=1 SV=2
Length = 382
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C A++
Sbjct: 224 NTRREQCETGARF 236
>sp|B1IXX9|GAL1_ECOLC Galactokinase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 /
Crooks) GN=galK PE=3 SV=1
Length = 382
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C A++
Sbjct: 224 NTRREQCETGARF 236
>sp|C4ZXS8|GAL1_ECOBW Galactokinase OS=Escherichia coli (strain K12 / MC4100 / BW2952)
GN=galK PE=3 SV=1
Length = 382
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
+G G MDQ I+ L A I L ++ V +P V+ S K SE+
Sbjct: 165 FVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS-NFKRTLVGSEY 223
Query: 61 NTRVVECRLSAKW 73
NTR +C A++
Sbjct: 224 NTRREQCETGARF 236
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,849,415
Number of Sequences: 539616
Number of extensions: 1197985
Number of successful extensions: 2440
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 2421
Number of HSP's gapped (non-prelim): 87
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)