RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy7889
(433 letters)
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 472 bits (1216), Expect = e-167
Identities = 233/297 (78%), Positives = 259/297 (87%), Gaps = 4/297 (1%)
Query: 6 FPITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIH 65
FPITALREIKILQLLKHENVV+LIEICRTKA+ YNR + + YLVFDFCEHDLAGLLSN+
Sbjct: 59 FPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL 118
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
VKF+L EIK+V+Q LLNGLYYIH NKILHRDMKAANVLIT+ G+LKLADFGLARAFS K
Sbjct: 119 VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 178
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQI 185
N Q NRYTNRVVTLWYRPPELLLG+R+YGPP+DLWGAGCIMAEMWTRSPIMQGNTEQ Q+
Sbjct: 179 NSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 238
Query: 186 TLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLL 245
LISQLCGSITPE WP V+ +LY K+EL K QKRKVK+RLK YV+D Y DL+DKLL+L
Sbjct: 239 ALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVL 298
Query: 246 DPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSMFEYLAPPRRPGHMRAHHHHH 302
DP++R DSD ALNHDFFW+DPMPSDL ML+ H SMFEYLAPPRR + HHHHH
Sbjct: 299 DPAQRIDSDDALNHDFFWSDPMPSDLKGMLSTHLTSMFEYLAPPRR----KHHHHHH 351
Score = 103 bits (258), Expect = 1e-24
Identities = 57/96 (59%), Positives = 68/96 (70%), Gaps = 4/96 (4%)
Query: 312 PAAGRATTETGYHDRVKERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDP 371
+ G +VK+RLK YV+D Y DL+DKLL+LDP++R DSD ALNHDFFW+DP
Sbjct: 260 ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP 319
Query: 372 MPSDLSKMLAQHTQSMFEYLAPPRRPGHMRAHHHHH 407
MPSDL ML+ H SMFEYLAPPRR + HHHHH
Sbjct: 320 MPSDLKGMLSTHLTSMFEYLAPPRR----KHHHHHH 351
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 381 bits (980), Expect = e-131
Identities = 93/275 (33%), Positives = 149/275 (54%), Gaps = 13/275 (4%)
Query: 6 FPITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIH 65
A+REIK+L+ L+HEN+V+L+E+C+ K +YLVF+F +H + L
Sbjct: 67 VKKIAMREIKLLKQLRHENLVNLLEVCKKKKR--------WYLVFEFVDHTILDDLELFP 118
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
++K + Q++NG+ + HS+ I+HRD+K N+L++++G++KL DFG AR +
Sbjct: 119 NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA--- 175
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQI 185
Y + V T WYR PELL+GD YG VD+W GC++ EM+ P+ G+++ Q+
Sbjct: 176 -APGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQL 234
Query: 186 TLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLL 245
I G++ P ++ + LP+ ++R+ ER P + + DL K L +
Sbjct: 235 YHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKL-SEVVIDLAKKCLHI 293
Query: 246 DPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQ 280
DP KR L+HDFF D S+ L Q
Sbjct: 294 DPDKRPFCAELLHHDFFQMDGFAERFSQELQLKVQ 328
Score = 67.2 bits (165), Expect = 2e-12
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 329 ERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQ 385
ER P + + DL K L +DP KR L+HDFF D S+ L Q
Sbjct: 273 ERRYPKL-SEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERFSQELQLKVQ 328
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 377 bits (971), Expect = e-130
Identities = 88/279 (31%), Positives = 144/279 (51%), Gaps = 13/279 (4%)
Query: 6 FPITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIH 65
ALREI++L+ LKH N+V+L+E+ R K +LVF++C+H + L
Sbjct: 45 IKKIALREIRMLKQLKHPNLVNLLEVFRRKRR--------LHLVFEYCDHTVLHELDRYQ 96
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
+K + Q L + + H + +HRD+K N+LITK ++KL DFG AR +
Sbjct: 97 RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLT--- 153
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQI 185
G + Y + V T WYR PELL+GD YGPPVD+W GC+ AE+ + P+ G ++ Q+
Sbjct: 154 -GPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQL 212
Query: 186 TLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLL 245
LI + G + P T ++ +++P + + E P + LL L +
Sbjct: 213 YLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNI-SYPALGLLKGCLHM 271
Query: 246 DPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSMFE 284
DP++R + L+H +F DL+K + ++++
Sbjct: 272 DPTERLTCEQLLHHPYFENIREIEDLAKEHDKPAENLYF 310
Score = 68.0 bits (167), Expect = 7e-13
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 337 DQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSMFE 389
LL L +DP++R + L+H +F DL+K + ++++
Sbjct: 258 SYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDLAKEHDKPAENLYF 310
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 378 bits (972), Expect = e-130
Identities = 111/303 (36%), Positives = 158/303 (52%), Gaps = 26/303 (8%)
Query: 6 FPITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIH 65
P TA+RE+ +L+ LKH N+V L +I T+ + LVF++ + DL L +
Sbjct: 43 APCTAIREVSLLKDLKHANIVTLHDIIHTE--------KSLTLVFEYLDKDLKQYLDDCG 94
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
++ +K + QLL GL Y H K+LHRD+K N+LI + G LKLADFGLARA S
Sbjct: 95 NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKS--- 151
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQI 185
Y N VVTLWYRPP++LLG +Y +D+WG GCI EM T P+ G+T ++Q+
Sbjct: 152 -IPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL 210
Query: 186 TLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLL 245
I ++ G+ T E+WPG+ + + + PK + + D G DLL KLL
Sbjct: 211 HFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRL--DSDGADLLTKLLQF 268
Query: 246 DPSKRFDSDAALNHDFFWTDP-----MPSDLSKMLAQHTQSMFEYLAPPRRPGHMRAHHH 300
+ R ++ A+ H FF + +P S + Q E AHHH
Sbjct: 269 EGRNRISAEDAMKHPFFLSLGERIHKLPDTTSIFALKEIQLQKE-------ASLRSAHHH 321
Query: 301 HHH 303
HHH
Sbjct: 322 HHH 324
Score = 69.2 bits (170), Expect = 4e-13
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 12/77 (15%)
Query: 337 DQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDP-----MPSDLSKMLAQHTQSMFEYL 391
D G DLL KLL + R ++ A+ H FF + +P S + Q E
Sbjct: 255 DSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLPDTTSIFALKEIQLQKE-- 312
Query: 392 APPRRPGHMRAHHHHHH 408
AHHHHHH
Sbjct: 313 -----ASLRSAHHHHHH 324
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 366 bits (943), Expect = e-126
Identities = 111/306 (36%), Positives = 157/306 (51%), Gaps = 42/306 (13%)
Query: 6 FPITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIH 65
P TA+REI +++ LKHEN+V L ++ T+ LVF+F ++DL + +
Sbjct: 46 TPSTAIREISLMKELKHENIVRLYDVIHTENK--------LTLVFEFMDNDLKKYMDSRT 97
Query: 66 VK-----FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARA 120
V L +K QLL GL + H NKILHRD+K N+LI K G LKL DFGLARA
Sbjct: 98 VGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARA 157
Query: 121 FSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNT 180
F VN +++ VVTLWYR P++L+G R Y +D+W GCI+AEM T P+ G
Sbjct: 158 FGI----PVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213
Query: 181 EQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVK---DQYGCD 237
+++Q+ LI + G+ WP V L Y + + R +++ L+P+ K D D
Sbjct: 214 DEEQLKLIFDIMGTPNESLWPSVTKLPKY-NPNIQQRPPRDLRQVLQPHTKEPLDGNLMD 272
Query: 238 LLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSMFEYLAPPRRPGHMRA 297
L LL L+P R + AL+H +F + G R+
Sbjct: 273 FLHGLLQLNPDMRLSAKQALHHPWFAEYYHHAS---------------------MGGSRS 311
Query: 298 HHHHHH 303
HHHHHH
Sbjct: 312 HHHHHH 317
Score = 63.8 bits (156), Expect = 2e-11
Identities = 21/86 (24%), Positives = 30/86 (34%), Gaps = 22/86 (25%)
Query: 323 YHDRVKERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQ 382
++ K + D D L LL L+P R + AL+H +F +
Sbjct: 254 LRQVLQPHTKEPL-DGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHAS------- 305
Query: 383 HTQSMFEYLAPPRRPGHMRAHHHHHH 408
G R+HHHHHH
Sbjct: 306 --------------MGGSRSHHHHHH 317
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 357 bits (918), Expect = e-122
Identities = 95/284 (33%), Positives = 143/284 (50%), Gaps = 18/284 (6%)
Query: 6 FPITALREIKILQLLK---HENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLS 62
P++ +RE+ +L+ L+ H NVV L ++C + LVF+ + DL L
Sbjct: 54 MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE---TKLTLVFEHVDQDLTTYLD 110
Query: 63 NI-HVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAF 121
+ IK ++ QLL GL ++HS++++HRD+K N+L+T +G +KLADFGLAR +
Sbjct: 111 KVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY 170
Query: 122 SQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTE 181
S T+ VVTLWYR PE+LL Y PVDLW GCI AEM+ R P+ +G+++
Sbjct: 171 SFQM-----ALTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSD 224
Query: 182 QQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDK 241
Q+ I + G E WP L K + D+ G DLL K
Sbjct: 225 VDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDI-----DELGKDLLLK 279
Query: 242 LLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSMFEY 285
L +P+KR + +AL+H +F + +Q+ E
Sbjct: 280 CLTFNPAKRISAYSALSHPYFQDLERCKENLDSHLPPSQNTSEL 323
Score = 62.2 bits (152), Expect = 7e-11
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 337 DQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSMFEY 390
D+ G DLL K L +P+KR + +AL+H +F + +Q+ E
Sbjct: 270 DELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKENLDSHLPPSQNTSEL 323
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 353 bits (907), Expect = e-120
Identities = 101/261 (38%), Positives = 142/261 (54%), Gaps = 14/261 (5%)
Query: 6 FPITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIH 65
P TA+REI +L+ L H N+V LI++ ++ LVF+F E DL +L
Sbjct: 62 IPSTAIREISLLKELHHPNIVSLIDVIHSERC--------LTLVFEFMEKDLKKVLDENK 113
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
+IK + QLL G+ + H ++ILHRD+K N+LI G LKLADFGLARAF
Sbjct: 114 TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI-- 171
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQI 185
V YT+ VVTLWYR P++L+G + Y VD+W GCI AEM T P+ G T+ Q+
Sbjct: 172 --PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL 229
Query: 186 TLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLL 245
I + G+ P WP V+ L L+ + +K+ + + Q G DLL +L
Sbjct: 230 PKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGF--CQEGIDLLSNMLCF 287
Query: 246 DPSKRFDSDAALNHDFFWTDP 266
DP+KR + A+NH +F
Sbjct: 288 DPNKRISARDAMNHPYFKDLD 308
Score = 48.3 bits (116), Expect = 2e-06
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 337 DQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDP 371
Q G DLL +L DP+KR + A+NH +F
Sbjct: 274 CQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 348 bits (894), Expect = e-119
Identities = 95/265 (35%), Positives = 136/265 (51%), Gaps = 18/265 (6%)
Query: 6 FPITALREIKILQLLK---HENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLS 62
PI+ +RE+ +L+ L+ H NVV L+++C T LVF+ + DL L
Sbjct: 54 LPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDR---EIKVTLVFEHVDQDLRTYLD 110
Query: 63 NI-HVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAF 121
IK +++Q L GL ++H+N I+HRD+K N+L+T G +KLADFGLAR +
Sbjct: 111 KAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY 170
Query: 122 SQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTE 181
S T VVTLWYR PE+LL Y PVD+W GCI AEM+ R P+ GN+E
Sbjct: 171 SYQM-----ALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSE 224
Query: 182 QQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDK 241
Q+ I L G + WP +L + P R V+ + ++ G LL +
Sbjct: 225 ADQLGKIFDLIGLPPEDDWPRDVSL---PRGAFPPRGPRPVQSVVPEM--EESGAQLLLE 279
Query: 242 LLLLDPSKRFDSDAALNHDFFWTDP 266
+L +P KR + AL H + D
Sbjct: 280 MLTFNPHKRISAFRALQHSYLHKDE 304
Score = 54.1 bits (131), Expect = 3e-08
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 337 DQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDP 371
++ G LL ++L +P KR + AL H + D
Sbjct: 270 EESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 349 bits (897), Expect = e-118
Identities = 97/269 (36%), Positives = 140/269 (52%), Gaps = 16/269 (5%)
Query: 6 FPITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIH 65
TALREIK+LQ L H N++ L++ K+N LVFDF E DL ++ +
Sbjct: 55 INRTALREIKLLQELSHPNIIGLLDAFGHKSN--------ISLVFDFMETDLEVIIKDNS 106
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
+ + IK + L GL Y+H + ILHRD+K N+L+ + G+LKLADFGLA++F
Sbjct: 107 LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS-- 164
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQI 185
YT++VVT WYR PELL G R YG VD+W GCI+AE+ R P + G+++ Q+
Sbjct: 165 --PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL 222
Query: 186 TLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLL 245
T I + G+ T E WP + +L Y + DL+ L L
Sbjct: 223 TRIFETLGTPTEEQWPDMCSLPDYV--TFKSFPGIPLHHIFSAA--GDDLLDLIQGLFLF 278
Query: 246 DPSKRFDSDAALNHDFFWTDPMPSDLSKM 274
+P R + AL +F P P+ ++
Sbjct: 279 NPCARITATQALKMKYFSNRPGPTPGCQL 307
Score = 57.2 bits (139), Expect = 3e-09
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 337 DQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKM 379
DL+ L L +P R + AL +F P P+ ++
Sbjct: 265 GDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQL 307
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 347 bits (893), Expect = e-118
Identities = 94/268 (35%), Positives = 150/268 (55%), Gaps = 20/268 (7%)
Query: 6 FPITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIH 65
P TA+RE+ +L+ L+H N++ L + +L+F++ E+DL + +
Sbjct: 76 VPGTAIREVSLLKELQHRNIIELKSVIHHN--------HRLHLIFEYAENDLKKYMDK-N 126
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT-----KTGILKLADFGLARA 120
S+ IK + QL+NG+ + HS + LHRD+K N+L++ +T +LK+ DFGLARA
Sbjct: 127 PDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186
Query: 121 FSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNT 180
F + ++T+ ++TLWYRPPE+LLG R+Y VD+W CI AEM ++P+ G++
Sbjct: 187 FGI----PIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS 242
Query: 181 EQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLD 240
E Q+ I ++ G +WPGV L + K PK + + +K L + D G DLL
Sbjct: 243 EIDQLFKIFEVLGLPDDTTWPGVTALPDW-KQSFPKFRGKTLKRVLGALL-DDEGLDLLT 300
Query: 241 KLLLLDPSKRFDSDAALNHDFFWTDPMP 268
+L +DP KR + AL H +F +
Sbjct: 301 AMLEMDPVKRISAKNALEHPYFSHNDFD 328
Score = 56.1 bits (136), Expect = 7e-09
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 329 ERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMP 373
+R+ + D G DLL +L +DP KR + AL H +F +
Sbjct: 284 KRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDFD 328
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 344 bits (885), Expect = e-117
Identities = 98/266 (36%), Positives = 136/266 (51%), Gaps = 20/266 (7%)
Query: 6 FPITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIH 65
P +ALREI +L+ LKH+N+V L ++ + LVF+FC+ DL + +
Sbjct: 44 VPSSALREICLLKELKHKNIVRLHDVLHSD--------KKLTLVFEFCDQDLKKYFDSCN 95
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
+K + QLL GL + HS +LHRD+K N+LI + G LKLA+FGLARAF
Sbjct: 96 GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI-- 153
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT-RSPIMQGNTEQQQ 184
V Y+ VVTLWYRPP++L G + Y +D+W AGCI AE+ P+ GN Q
Sbjct: 154 --PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211
Query: 185 ITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVK--DQYGCDLLDKL 242
+ I +L G+ T E WP + L Y L V + G DLL L
Sbjct: 212 LKRIFRLLGTPTEEQWPSMTKLPDYKPY-----PMYPATTSLVNVVPKLNATGRDLLQNL 266
Query: 243 LLLDPSKRFDSDAALNHDFFWTDPMP 268
L +P +R ++ AL H +F P
Sbjct: 267 LKCNPVQRISAEEALQHPYFSDFCPP 292
Score = 55.6 bits (135), Expect = 9e-09
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 328 KERLKPYVK--DQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMP 373
L V + G DLL LL +P +R ++ AL H +F P
Sbjct: 245 TTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 342 bits (879), Expect = e-117
Identities = 99/257 (38%), Positives = 140/257 (54%), Gaps = 15/257 (5%)
Query: 6 FPITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIH 65
P T +REI IL+ LKH N+V L ++ TK LVF+ + DL LL
Sbjct: 43 IPSTTIREISILKELKHSNIVKLYDVIHTKKR--------LVLVFEHLDQDLKKLLDVCE 94
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
K + QLLNG+ Y H ++LHRD+K N+LI + G LK+ADFGLARAF
Sbjct: 95 GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI-- 152
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQI 185
V +YT+ +VTLWYR P++L+G + Y +D+W GCI AEM +P+ G +E Q+
Sbjct: 153 --PVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL 210
Query: 186 TLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLL 245
I ++ G+ ++WP V L Y + + LK D+ G DLL K+L L
Sbjct: 211 MRIFRILGTPNSKNWPNVTELPKY-DPNFTVYEPLPWESFLKGL--DESGIDLLSKMLKL 267
Query: 246 DPSKRFDSDAALNHDFF 262
DP++R + AL H +F
Sbjct: 268 DPNQRITAKQALEHAYF 284
Score = 47.5 bits (114), Expect = 3e-06
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 337 DQYGCDLLDKLLLLDPSKRFDSDAALNHDFF 367
D+ G DLL K+L LDP++R + AL H +F
Sbjct: 254 DESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 340 bits (875), Expect = e-116
Identities = 107/270 (39%), Positives = 150/270 (55%), Gaps = 16/270 (5%)
Query: 6 FPITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLL-SNI 64
P TA+REI +L+ L H N+V L+++ T+ YLVF+F DL + ++
Sbjct: 45 VPSTAIREISLLKELNHPNIVKLLDVIHTENK--------LYLVFEFLHQDLKKFMDASA 96
Query: 65 HVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQT 124
L IK + QLL GL + HS+++LHRD+K N+LI G +KLADFGLARAF
Sbjct: 97 LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV- 155
Query: 125 KNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQ 184
V YT+ VVTLWYR PE+LLG + Y VD+W GCI AEM TR + G++E Q
Sbjct: 156 ---PVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
Query: 185 ITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLL 244
+ I + G+ WPGV ++ Y K PK ++ + + P D+ G LL ++L
Sbjct: 213 LFRIFRTLGTPDEVVWPGVTSMPDY-KPSFPKWARQDFSKVVPPL--DEDGRSLLSQMLH 269
Query: 245 LDPSKRFDSDAALNHDFFWTDPMPSDLSKM 274
DP+KR + AAL H FF P ++
Sbjct: 270 YDPNKRISAKAALAHPFFQDVTKPVPHLRL 299
Score = 53.7 bits (130), Expect = 4e-08
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 337 DQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKM 379
D+ G LL ++L DP+KR + AAL H FF P ++
Sbjct: 257 DEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL 299
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 331 bits (850), Expect = e-111
Identities = 97/338 (28%), Positives = 156/338 (46%), Gaps = 37/338 (10%)
Query: 6 FPITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLL---- 61
++A REI +L+ LKH NV+ L ++ + A+ +L+FD+ EHDL ++
Sbjct: 61 ISMSACREIALLRELKHPNVISLQKVFLSHAD------RKVWLLFDYAEHDLWHIIKFHR 114
Query: 62 ----SNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT----KTGILKLA 113
+ V+ G +K ++ Q+L+G++Y+H+N +LHRD+K AN+L+ + G +K+A
Sbjct: 115 ASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIA 174
Query: 114 DFGLARAFSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRS 173
D G AR F+ + VVT WYR PELLLG R+Y +D+W GCI AE+ T
Sbjct: 175 DMGFARLFNSPLKPLAD-LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
Query: 174 PIMQGNTE---------QQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKE 224
PI E Q+ I + G + W ++ + ++ + +
Sbjct: 234 PIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNC 293
Query: 225 RLKPYVK------DQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQH 278
L Y++ D LL KLL +DP KR S+ A+ +F DP+P+ Q
Sbjct: 294 SLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQI 353
Query: 279 TQSMFEYLA---PPRRPGHMRAHHHHHHAGAPGAAGPA 313
E+L P + + G P
Sbjct: 354 PYPKREFLTEEEPDDKGDKKNQQQQQGNNHTNGTGHPG 391
Score = 64.8 bits (158), Expect = 1e-11
Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 3/85 (3%)
Query: 337 DQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSMFEYLA---P 393
D LL KLL +DP KR S+ A+ +F DP+P+ Q E+L P
Sbjct: 307 DSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTEEEP 366
Query: 394 PRRPGHMRAHHHHHHAGAPGAAGPA 418
+ + G P
Sbjct: 367 DDKGDKKNQQQQQGNNHTNGTGHPG 391
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 241 bits (617), Expect = 9e-76
Identities = 79/329 (24%), Positives = 132/329 (40%), Gaps = 27/329 (8%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLL---SNIHVK 67
RE++I++ L H N+V L + + + LV D+ + + S
Sbjct: 95 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDE--VYLNLVLDYVPETVYRVARHYSRAKQT 152
Query: 68 FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLI-TKTGILKLADFGLARAFSQTKN 126
+ +K + QL L YIHS I HRD+K N+L+ T +LKL DFG A+ +
Sbjct: 153 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-- 210
Query: 127 GQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQIT 186
+ + + +YR PEL+ G +Y +D+W AGC++AE+ PI G++ Q+
Sbjct: 211 ---EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
Query: 187 LISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLLD 246
I ++ G+ T E + Y + + P+ + + +P L +LL
Sbjct: 268 EIIKVLGTPTREQIREM--NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 324
Query: 247 PSKRFDSDAALNHDFF--WTDP---MPS--------DLSKMLAQHTQSMFEYLAPPRRPG 293
P+ R A H FF DP +P+ + + + L PP
Sbjct: 325 PTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARI 384
Query: 294 HMRAHHHHHHAGAPGAAGPAAGRATTETG 322
A + A A G+
Sbjct: 385 QAAASTPTNATAASDANTGDRGQTNNAAS 413
Score = 42.4 bits (100), Expect = 2e-04
Identities = 19/101 (18%), Positives = 28/101 (27%), Gaps = 13/101 (12%)
Query: 340 GCDLLDKLLLLDPSKRFDSDAALNHDFF--WTDP---MPS--------DLSKMLAQHTQS 386
L +LL P+ R A H FF DP +P+ + +
Sbjct: 313 AIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPP 372
Query: 387 MFEYLAPPRRPGHMRAHHHHHHAGAPGAAGPAAGRATTETG 427
+ L PP A + A A G+
Sbjct: 373 LATILIPPHARIQAAASTPTNATAASDANTGDRGQTNNAAS 413
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 239 bits (611), Expect = 3e-75
Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 14/256 (5%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLL---SNIHVK 67
RE++I++++KH NVV L + ++ + LV ++ + + +
Sbjct: 80 NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF--LNLVLEYVPETVYRASRHYAKLKQT 137
Query: 68 FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLI-TKTGILKLADFGLARAFSQTKN 126
+ IK + QLL L YIHS I HRD+K N+L+ +G+LKL DFG A+
Sbjct: 138 MPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG-- 195
Query: 127 GQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQIT 186
+ + + +YR PEL+ G NY +D+W GC+MAE+ P+ G + Q+
Sbjct: 196 ---EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLV 252
Query: 187 LISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLLD 246
I ++ G+ + E + Y + + P+ + + +P DL+ +LL
Sbjct: 253 EIIKVLGTPSREQIKTM--NPNYMEHKFPQIRPHPFSKVFRPRT-PPDAIDLISRLLEYT 309
Query: 247 PSKRFDSDAALNHDFF 262
PS R + AL H FF
Sbjct: 310 PSARLTAIEALCHPFF 325
Score = 39.6 bits (93), Expect = 0.001
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 340 GCDLLDKLLLLDPSKRFDSDAALNHDFF 367
DL+ +LL PS R + AL H FF
Sbjct: 298 AIDLISRLLEYTPSARLTAIEALCHPFF 325
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 218 bits (557), Expect = 4e-68
Identities = 86/271 (31%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTF------YLVFDFCEHDL-----A 58
ALREIKI++ L H+N+V + EI +Q + Y+V ++ E DL
Sbjct: 55 ALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ 114
Query: 59 GLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLI-TKTGILKLADFGL 117
G L H + + QLL GL YIHS +LHRD+K AN+ I T+ +LK+ DFGL
Sbjct: 115 GPLLEEHARL-------FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGL 167
Query: 118 ARAFSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQ 177
AR + +VT WYR P LLL NY +D+W AGCI AEM T +
Sbjct: 168 ARIMD-PHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFA 226
Query: 178 GNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCD 237
G E +Q+ LI + + E + ++ + + + L P + + D
Sbjct: 227 GAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLL-PGISRE-AVD 284
Query: 238 LLDKLLLLDPSKRFDSDAALNHDFF--WTDP 266
L+++L P R ++ AL+H + ++ P
Sbjct: 285 FLEQILTFSPMDRLTAEEALSHPYMSIYSFP 315
Score = 40.7 bits (96), Expect = 6e-04
Identities = 9/32 (28%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF--WTDP 371
D L+++L P R ++ AL+H + ++ P
Sbjct: 284 DFLEQILTFSPMDRLTAEEALSHPYMSIYSFP 315
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 220 bits (562), Expect = 2e-67
Identities = 87/324 (26%), Positives = 131/324 (40%), Gaps = 75/324 (23%)
Query: 6 FPITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGL----- 60
LREI IL L H++VV +++I K + Y+V + + D L
Sbjct: 95 DCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD---ELYVVLEIADSDFKKLFRTPV 151
Query: 61 -LSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLAR 119
L+ +H+K ++ LL G+ Y+HS ILHRD+K AN L+ + +K+ DFGLAR
Sbjct: 152 YLTELHIKT-------LLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
Query: 120 AFSQTKNGQVNR-----------------------YTNRVVTLWYRPPELLLGDRNYGPP 156
+NG T VVT WYR PEL+L NY
Sbjct: 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEA 264
Query: 157 VDLWGAGCIMAEM-----------WTRSPIMQGN--------------------TEQQQI 185
+D+W GCI AE+ R P+ G+ + Q+
Sbjct: 265 IDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQL 324
Query: 186 TLISQLCGSITPESWPGVETLDLYNKME-LPKAQKRKVKERLKPYVKDQYGCDLLDKLLL 244
+I + G+ + E +E D + PK + + ER P LL ++L+
Sbjct: 325 NVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERF-PASSAD-AIHLLKRMLV 382
Query: 245 LDPSKRFDSDAALNHDFF--WTDP 266
+P+KR + L H FF
Sbjct: 383 FNPNKRITINECLAHPFFKEVRIA 406
Score = 42.1 bits (99), Expect = 3e-04
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 340 GCDLLDKLLLLDPSKRFDSDAALNHDFF--WTDP 371
LL ++L+ +P+KR + L H FF
Sbjct: 373 AIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA 406
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 217 bits (554), Expect = 4e-67
Identities = 80/272 (29%), Positives = 132/272 (48%), Gaps = 27/272 (9%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDL-----AGLLSNI 64
LREIKIL+ KHEN++ + I R + + + Y++ + + DL +LS+
Sbjct: 56 TLREIKILKHFKHENIITIFNIQR--PDSFENFN-EVYIIQELMQTDLHRVISTQMLSDD 112
Query: 65 HVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQT 124
H+++ I Q L + +H + ++HRD+K +N+LI LK+ DFGLAR ++
Sbjct: 113 HIQY-------FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165
Query: 125 KNGQVNRY------TNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQG 178
V T WYR PE++L Y +D+W GCI+AE++ R PI G
Sbjct: 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225
Query: 179 NTEQQQITLISQLCGSITPESWPGVETLDLYNKM--ELPKAQKRKVKERLKPYVKDQYGC 236
+ Q+ LI + G+ ++ + LP +++ P V + G
Sbjct: 226 RDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPK-GI 283
Query: 237 DLLDKLLLLDPSKRFDSDAALNHDFF--WTDP 266
DLL ++L+ DP+KR + AL H + + DP
Sbjct: 284 DLLQRMLVFDPAKRITAKEALEHPYLQTYHDP 315
Score = 40.7 bits (96), Expect = 6e-04
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF--WTDP 371
DLL ++L+ DP+KR + AL H + + DP
Sbjct: 284 DLLQRMLVFDPAKRITAKEALEHPYLQTYHDP 315
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 216 bits (553), Expect = 7e-67
Identities = 72/268 (26%), Positives = 121/268 (45%), Gaps = 28/268 (10%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLA-------GLLS 62
LREI++L H N++ L +I YLV + DLA ++S
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMH---KLYLVTELMRTDLAQVIHDQRIVIS 132
Query: 63 NIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFS 122
H+++ + +L GL+ +H ++HRD+ N+L+ + + DF LAR +
Sbjct: 133 PQHIQY-------FMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDT 185
Query: 123 QTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQ 182
N T+ V WYR PEL++ + + VD+W AGC+MAEM+ R + +G+T
Sbjct: 186 ADAN-----KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240
Query: 183 QQITLISQLCGSITPESWPGVETLDLYNKME--LPKAQKRKVKERLKPYVKDQYGCDLLD 240
Q+ I ++ G+ E + + + L R + P DL+
Sbjct: 241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVV-PTADPV-ALDLIA 298
Query: 241 KLLLLDPSKRFDSDAALNHDFF--WTDP 266
K+L +P +R ++ AL H +F DP
Sbjct: 299 KMLEFNPQRRISTEQALRHPYFESLFDP 326
Score = 40.8 bits (96), Expect = 6e-04
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF--WTDP 371
DL+ K+L +P +R ++ AL H +F DP
Sbjct: 295 DLIAKMLEFNPQRRISTEQALRHPYFESLFDP 326
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 216 bits (552), Expect = 1e-66
Identities = 93/265 (35%), Positives = 131/265 (49%), Gaps = 21/265 (7%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDL-----AGLLSNI 64
LREIKIL +HEN++ + +I R A + + Y+V D E DL LSN
Sbjct: 72 TLREIKILLRFRHENIIGINDIIR--APTIEQMK-DVYIVQDLMETDLYKLLKTQHLSND 128
Query: 65 HVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQT 124
H+ + + Q+L GL YIHS +LHRD+K +N+L+ T LK+ DFGLAR
Sbjct: 129 HICY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP- 180
Query: 125 KNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQ 184
+ T V T WYR PE++L + Y +D+W GCI+AEM + PI G Q
Sbjct: 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
Query: 185 ITLISQLCGSITPESWPGVETLDLYNKME-LPKAQKRKVKERLKPYVKDQYGCDLLDKLL 243
+ I + GS + E + L N + LP K P + DLLDK+L
Sbjct: 241 LNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSK-ALDLLDKML 298
Query: 244 LLDPSKRFDSDAALNHDFF--WTDP 266
+P KR + + AL H + + DP
Sbjct: 299 TFNPHKRIEVEQALAHPYLEQYYDP 323
Score = 40.7 bits (96), Expect = 7e-04
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF--WTDP 371
DLLDK+L +P KR + + AL H + + DP
Sbjct: 292 DLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 323
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 212 bits (543), Expect = 7e-66
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 28/264 (10%)
Query: 10 ALREIKILQLLK-HENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVK 67
REIKIL+ L+ N++ L +I + ++ T LVF+ + D L
Sbjct: 77 IKREIKILENLRGGPNIITLADIVKDPVSR------TPALVFEHVNNTDFKQLYQ----T 126
Query: 68 FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLI-TKTGILKLADFGLARAFSQTKN 126
+ +I+ + ++L L Y HS I+HRD+K NV+I + L+L D+GLA + +
Sbjct: 127 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ- 185
Query: 127 GQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTR-SPIMQGNTEQQQI 185
Y RV + +++ PELL+ + Y +D+W GC++A M R P G+ Q+
Sbjct: 186 ----EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 241
Query: 186 TLISQLCGSITPESWPGVETLDL---YNKMELPKAQKRK----VKERLKPYVKDQYGCDL 238
I+++ G+ + ++L +N + L + +++ V + V + D
Sbjct: 242 VRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPE-ALDF 299
Query: 239 LDKLLLLDPSKRFDSDAALNHDFF 262
LDKLL D R + A+ H +F
Sbjct: 300 LDKLLRYDHQSRLTAREAMEHPYF 323
Score = 39.9 bits (94), Expect = 0.001
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 340 GCDLLDKLLLLDPSKRFDSDAALNHDFF 367
D LDKLL D R + A+ H +F
Sbjct: 296 ALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 213 bits (544), Expect = 1e-65
Identities = 84/265 (31%), Positives = 134/265 (50%), Gaps = 26/265 (9%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDL-----AGLLSNI 64
A RE+++L+ ++HENV+ L+++ ++ + FYLV F DL L
Sbjct: 71 AYRELRLLKHMRHENVIGLLDVFT--PDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGED 128
Query: 65 HVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQT 124
++F ++ Q+L GL YIH+ I+HRD+K N+ + + LK+ DFGLAR
Sbjct: 129 RIQF-------LVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE 181
Query: 125 KNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQ 184
T VVT WYR PE++L Y VD+W GCIMAEM T + +G+ Q
Sbjct: 182 M-------TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ 234
Query: 185 ITLISQLCGSITPESWPGVETLDLYNKME-LPKAQKRKVKERLKPYVKDQYGCDLLDKLL 243
+ I ++ G+ E +++ + N M+ LP+ +K+ L +LL+K+L
Sbjct: 235 LKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASIL-TNASPL-AVNLLEKML 292
Query: 244 LLDPSKRFDSDAALNHDFF--WTDP 266
+LD +R + AL H +F D
Sbjct: 293 VLDAEQRVTAGEALAHPYFESLHDT 317
Score = 40.4 bits (95), Expect = 9e-04
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF--WTDP 371
+LL+K+L+LD +R + AL H +F D
Sbjct: 286 NLLEKMLVLDAEQRVTAGEALAHPYFESLHDT 317
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 212 bits (541), Expect = 2e-65
Identities = 87/264 (32%), Positives = 132/264 (50%), Gaps = 25/264 (9%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGL----LSNIH 65
A RE+ +L+ ++HENV+ L+++ R FYLV F + DL + S
Sbjct: 70 AYRELLLLKHMQHENVIGLLDVFT--PASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEK 127
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
+++ ++ Q+L GL YIHS ++HRD+K N+ + + LK+ DFGLAR
Sbjct: 128 IQY-------LVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM 180
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQI 185
T VVT WYR PE++L +Y VD+W GCIMAEM T + +G Q+
Sbjct: 181 -------TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL 233
Query: 186 TLISQLCGSITPESWPGVETLDLYNKME-LPKAQKRKVKERLKPYVKDQYGCDLLDKLLL 244
T I ++ G E + + ++ LP+ ++ + P Q DLL+K+L
Sbjct: 234 TQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLF-PRASPQ-AADLLEKMLE 291
Query: 245 LDPSKRFDSDAALNHDFF--WTDP 266
LD KR + AL H FF + DP
Sbjct: 292 LDVDKRLTAAQALTHPFFEPFRDP 315
Score = 40.7 bits (96), Expect = 6e-04
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF--WTDP 371
DLL+K+L LD KR + AL H FF + DP
Sbjct: 284 DLLEKMLELDVDKRLTAAQALTHPFFEPFRDP 315
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 213 bits (543), Expect = 2e-65
Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 56/298 (18%)
Query: 6 FPITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTF------------------- 46
P RE+ I+++L H N++ L++ T ++ +
Sbjct: 43 DPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKS 102
Query: 47 -----------YLVFDFCEHDLAGL----------LSNIHVKFSLGEIKKVIQQLLNGLY 85
++ ++ L + + + I QL +
Sbjct: 103 VIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISI-------YIYQLFRAVG 155
Query: 86 YIHSNKILHRDMKAANVLI-TKTGILKLADFGLARAFSQTKNGQVNRYTNRVVTLWYRPP 144
+IHS I HRD+K N+L+ +K LKL DFG A+ ++ + + +YR P
Sbjct: 156 FIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-----SVAYICSRFYRAP 210
Query: 145 ELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQITLISQLCGSITPESWPGVE 204
EL+LG Y P +DLW GC+ E+ P+ G T Q+ I Q+ G+ T E +
Sbjct: 211 ELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMN 270
Query: 205 TLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFF 262
Y ++ P + + ++ L P DLL+++L +P R + A+ H FF
Sbjct: 271 P--HYTEVRFPTLKAKDWRKIL-PEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325
Score = 40.1 bits (94), Expect = 0.001
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 333 PYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFF 367
P DLL+++L +P R + A+ H FF
Sbjct: 291 PEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 211 bits (539), Expect = 8e-65
Identities = 86/265 (32%), Positives = 130/265 (49%), Gaps = 26/265 (9%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDL-----AGLLSNI 64
RE+++L+ +KHENV+ L+++ + + YLV DL L++
Sbjct: 75 TYRELRLLKHMKHENVIGLLDV--FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 65 HVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQT 124
HV+F +I Q+L GL YIHS I+HRD+K +N+ + + LK+ DFGLAR +
Sbjct: 133 HVQF-------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185
Query: 125 KNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQ 184
T V T WYR PE++L +Y VD+W GCIMAE+ T + G Q
Sbjct: 186 M-------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 238
Query: 185 ITLISQLCGSITPESWPGVETLDLYNKME-LPKAQKRKVKERLKPYVKDQYGCDLLDKLL 243
+ LI +L G+ E + + N ++ L + K DLL+K+L
Sbjct: 239 LKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF-IGANPL-AVDLLEKML 296
Query: 244 LLDPSKRFDSDAALNHDFF--WTDP 266
+LD KR + AL H +F + DP
Sbjct: 297 VLDSDKRITAAQALAHAYFAQYHDP 321
Score = 40.8 bits (96), Expect = 6e-04
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF--WTDP 371
DLL+K+L+LD KR + AL H +F + DP
Sbjct: 290 DLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 321
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 211 bits (540), Expect = 9e-65
Identities = 89/297 (29%), Positives = 137/297 (46%), Gaps = 53/297 (17%)
Query: 10 ALREIKILQLLK-HENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDL-----AGLLSN 63
REI IL L HEN+V+L+ + R ++ YLVFD+ E DL A +L
Sbjct: 55 TFREIMILTELSGHENIVNLLNVLRADNDR------DVYLVFDYMETDLHAVIRANILEP 108
Query: 64 IHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQ 123
+H ++ V+ QL+ + Y+HS +LHRDMK +N+L+ +K+ADFGL+R+F
Sbjct: 109 VHKQY-------VVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVN 161
Query: 124 TKNGQVNRY-----------------TNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIM 166
+ N T+ V T WYR PE+LLG Y +D+W GCI+
Sbjct: 162 IRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCIL 221
Query: 167 AEMWTRSPIMQGNTEQQQITLISQLCGSITPE---------------SWPGVETLDLYNK 211
E+ PI G++ Q+ I + + E S + NK
Sbjct: 222 GEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNK 281
Query: 212 MELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFF--WTDP 266
++ K + + ++ DLLDKLL +P+KR ++ AL H F + +P
Sbjct: 282 RDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNP 338
Score = 38.9 bits (91), Expect = 0.002
Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 23/109 (21%)
Query: 266 PMPSDLSKMLAQHTQSMFEYLAP-PRRPGHMRAHHHHHHAGAPGAAGPAAGRATTETGYH 324
P D+ + + ++M E L + P A
Sbjct: 250 PSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKAD--------- 300
Query: 325 DRVKERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFF--WTDP 371
++ DLLDKLL +P+KR ++ AL H F + +P
Sbjct: 301 -----------CNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNP 338
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 207 bits (529), Expect = 2e-63
Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 20/262 (7%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNR--YRSTFYLVFDFCEHDLAGLL---SNIH 65
L+ ++ L +L H N+V L T + R Y +V ++ L
Sbjct: 67 LQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIY---LNVVMEYVPDTLHRCCRNYYRRQ 123
Query: 66 VKFSLGEIKKVIQQLLNGLYYIH--SNKILHRDMKAANVLI-TKTGILKLADFGLARAFS 122
V IK + QL+ + +H S + HRD+K NVL+ G LKL DFG A+ S
Sbjct: 124 VAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS 183
Query: 123 QTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQ 182
++ + + +YR PEL+ G+++Y VD+W GCI AEM PI +G+
Sbjct: 184 PSEP-----NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA 238
Query: 183 QQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVK--DQYGCDLLD 240
Q+ I ++ G + E + + ++L ++ + + DLL
Sbjct: 239 GQLHEIVRVLGCPSREVLRKLNP--SHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLS 296
Query: 241 KLLLLDPSKRFDSDAALNHDFF 262
LL P +R AL H +F
Sbjct: 297 ALLQYLPEERMKPYEALCHPYF 318
Score = 39.6 bits (93), Expect = 0.001
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 340 GCDLLDKLLLLDPSKRFDSDAALNHDFF 367
DLL LL P +R AL H +F
Sbjct: 291 AYDLLSALLQYLPEERMKPYEALCHPYF 318
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 204 bits (522), Expect = 1e-61
Identities = 80/312 (25%), Positives = 136/312 (43%), Gaps = 67/312 (21%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGL------LSN 63
LREI IL LK + ++ L ++ + ++ Y+V + + DL L L+
Sbjct: 72 ILREITILNRLKSDYIIRLYDLII--PDDLLKFD-ELYIVLEIADSDLKKLFKTPIFLTE 128
Query: 64 IHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQ 123
H+K ++ LL G +IH + I+HRD+K AN L+ + +K+ DFGLAR +
Sbjct: 129 EHIKT-------ILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181
Query: 124 TKNGQVNRY------------------TNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCI 165
K+ + T+ VVT WYR PEL+L NY +D+W GCI
Sbjct: 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCI 241
Query: 166 MAEM-----------WTRSPIMQGNTEQQ-----------------QITLISQLCGSITP 197
AE+ R P+ G++ Q+ +I + G+ T
Sbjct: 242 FAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTE 301
Query: 198 ESWPGVETLDLYNKME-LPKAQKRKVKERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAA 256
+ + ++ ++ P + +K++ P + D G +LL+ +L +P+KR D A
Sbjct: 302 DDLKNINKPEVIKYIKLFPHRKPINLKQKY-PSISDD-GINLLESMLKFNPNKRITIDQA 359
Query: 257 LNHDFF--WTDP 266
L+H +
Sbjct: 360 LDHPYLKDVRKK 371
Score = 40.9 bits (96), Expect = 6e-04
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF--WTDP 371
+LL+ +L +P+KR D AL+H +
Sbjct: 340 NLLESMLKFNPNKRITIDQALDHPYLKDVRKK 371
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 200 bits (511), Expect = 9e-60
Identities = 77/275 (28%), Positives = 125/275 (45%), Gaps = 35/275 (12%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGL----LSNIH 65
A RE+ +++ + H+N++ L+ + + YLV + + +L + L +
Sbjct: 108 AYRELVLMKCVNHKNIISLLNVFT--PQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 165
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
+ + ++ Q+L G+ ++HS I+HRD+K +N+++ LK+ DFGLAR +
Sbjct: 166 MSY-------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS- 217
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQI 185
T VVT +YR PE++LG Y VD+W GCIM EM + G Q
Sbjct: 218 ----FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 272
Query: 186 TLISQLCGS--------ITPESWPGVETLDLYNKMEL----PKAQKRKVKERLKPYVKDQ 233
+ + G+ + P VE Y + P + E K K
Sbjct: 273 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKL--KAS 330
Query: 234 YGCDLLDKLLLLDPSKRFDSDAALNHDFF--WTDP 266
DLL K+L++DP+KR D AL H + W DP
Sbjct: 331 QARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 365
Score = 39.4 bits (92), Expect = 0.002
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF--WTDP 371
DLL K+L++DP+KR D AL H + W DP
Sbjct: 334 DLLSKMLVIDPAKRISVDDALQHPYINVWYDP 365
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 197 bits (502), Expect = 3e-59
Identities = 73/273 (26%), Positives = 123/273 (45%), Gaps = 31/273 (11%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGL----LSNIH 65
A RE+ +++ + H+N++ L+ + + Y+V + + +L + L +
Sbjct: 71 AYRELVLMKCVNHKNIIGLLNVFT--PQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 128
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
+ + ++ Q+L G+ ++HS I+HRD+K +N+++ LK+ DFGLAR +
Sbjct: 129 MSY-------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 181
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQI 185
T VVT +YR PE++LG Y VD+W GCIM EM + G Q
Sbjct: 182 MM-----TPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW 235
Query: 186 TLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKE----------RLKPYVKDQYG 235
+ + G+ PE ++ PK ++ +K
Sbjct: 236 NKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA 295
Query: 236 CDLLDKLLLLDPSKRFDSDAALNHDFF--WTDP 266
DLL K+L++D SKR D AL H + W DP
Sbjct: 296 RDLLSKMLVIDASKRISVDEALQHPYINVWYDP 328
Score = 38.9 bits (91), Expect = 0.002
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 324 HDRVKERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFF--WTDP 371
+ +K DLL K+L++D SKR D AL H + W DP
Sbjct: 279 VLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 328
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 160 bits (407), Expect = 3e-46
Identities = 62/285 (21%), Positives = 109/285 (38%), Gaps = 52/285 (18%)
Query: 10 ALREIKILQLLKHENVVHLIEI-----CRTKANQYNRYRSTFYLVFDFCE-HDLAGLLSN 63
L E+ +L L H+ VV K + +ST ++ ++CE L L+ +
Sbjct: 49 ILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS 108
Query: 64 IHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQ 123
++ E ++ +Q+L L YIHS I+HRD+K N+ I ++ +K+ DFGLA+ +
Sbjct: 109 ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
Query: 124 TKNGQVNRYTNRVV----------TLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRS 173
+ + N T Y E+L G +Y +D++ G I EM
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---- 224
Query: 174 PIMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQ 233
+ G+E +++ K+ R V P D
Sbjct: 225 -----------------IYP---FS--TGMERVNILKKL-------RSVSIEFPPDFDDN 255
Query: 234 Y---GCDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKML 275
++ L+ DP+KR + LN + + + L
Sbjct: 256 KMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEAL 300
Score = 33.1 bits (76), Expect = 0.17
Identities = 8/39 (20%), Positives = 16/39 (41%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKML 380
++ L+ DP+KR + LN + + + L
Sbjct: 262 KIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEAL 300
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 155 bits (395), Expect = 1e-44
Identities = 59/264 (22%), Positives = 96/264 (36%), Gaps = 52/264 (19%)
Query: 10 ALREIKILQLLKHENVVHLIE--------ICRTKANQYNRYRSTFYLVFDFCEH-DLAGL 60
A RE+K L L H N+VH + N ++ +FC+ L
Sbjct: 51 AEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW 110
Query: 61 LSN-IHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLAR 119
+ K ++ +Q+ G+ YIHS K+++RD+K +N+ + T +K+ DFGL
Sbjct: 111 IEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVT 170
Query: 120 AFSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGN 179
+ + T TL Y PE + ++YG VDL+ G I+AE+
Sbjct: 171 SLKND-----GKRTRSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAELLHVCD----- 219
Query: 180 TEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLL 239
ET + + + + + K LL
Sbjct: 220 ---------------------TAFETSKFFTDL-----RDGIISDIFDKKEK-----TLL 248
Query: 240 DKLLLLDPSKRFDSDAALNHDFFW 263
KLL P R ++ L W
Sbjct: 249 QKLLSKKPEDRPNTSEILRTLTVW 272
Score = 29.6 bits (67), Expect = 2.1
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFW 368
LL KLL P R ++ L W
Sbjct: 246 TLLQKLLSKKPEDRPNTSEILRTLTVW 272
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 156 bits (396), Expect = 2e-44
Identities = 61/272 (22%), Positives = 90/272 (33%), Gaps = 53/272 (19%)
Query: 11 LREIKILQLLKH--ENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHVKF 68
EI L L+ + ++ L + T Y+V + DL L
Sbjct: 74 RNEIAYLNKLQQHSDKIIRLYDYEITD--------QYIYMVMECGNIDLNSWLKK-KKSI 124
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
E K + +L ++ IH + I+H D+K AN LI G+LKL DFG+A
Sbjct: 125 DPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSV 183
Query: 129 VNRYTNRVVTLWYRPPELLLG----------DRNYGPPVDLWGAGCIMAEMWTRSPIMQG 178
V ++V T+ Y PPE + P D+W GCI+ M Q
Sbjct: 184 VK--DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
Query: 179 NTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDL 238
Q L + + + E E Q D+
Sbjct: 242 IINQIS-KLHAIIDPNHEIEFPDIPE----------KDLQ------------------DV 272
Query: 239 LDKLLLLDPSKRFDSDAALNHDFFWTDPMPSD 270
L L DP +R L H + P +
Sbjct: 273 LKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 304
Score = 35.0 bits (81), Expect = 0.036
Identities = 9/34 (26%), Positives = 13/34 (38%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSD 375
D+L L DP +R L H + P +
Sbjct: 271 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 304
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 156 bits (396), Expect = 4e-44
Identities = 63/300 (21%), Positives = 98/300 (32%), Gaps = 56/300 (18%)
Query: 11 LREIKILQLLKH--ENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHVKF 68
EI L L+ + ++ L + T Y+V + DL L
Sbjct: 55 RNEIAYLNKLQQHSDKIIRLYDYEITD--------QYIYMVMECGNIDLNSWLKK-KKSI 105
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
E K + +L ++ IH + I+H D+K AN LI G+LKL DFG+A
Sbjct: 106 DPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ---PDT 161
Query: 129 VNRYTNRVV-TLWYRPPELLLG----------DRNYGPPVDLWGAGCIMAEMWTRSPIMQ 177
+ + V T+ Y PPE + P D+W GCI+ M Q
Sbjct: 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 221
Query: 178 GNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCD 237
Q L + + + E E Q D
Sbjct: 222 QIINQISK-LHAIIDPNHEIEFPDIPE----------KDLQ------------------D 252
Query: 238 LLDKLLLLDPSKRFDSDAALNHDFFWTDPMP-SDLSKMLAQHTQSMFEYLAPPRRPGHMR 296
+L L DP +R L H + P + ++K + + + L P +
Sbjct: 253 VLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSIL 312
Score = 35.8 bits (83), Expect = 0.021
Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMP-SDLSKMLAQHTQSMFEYLAPPRRPGHM 400
D+L L DP +R L H + P + ++K + + + L P +
Sbjct: 252 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSI 311
Query: 401 R 401
Sbjct: 312 L 312
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 154 bits (390), Expect = 2e-42
Identities = 58/264 (21%), Positives = 105/264 (39%), Gaps = 47/264 (17%)
Query: 10 ALREIKILQ-LLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHVKF 68
A RE+++L+ +H NV+ + + Y+ + C L +
Sbjct: 64 ADREVQLLRESDEHPNVIRYFCTEKDRQF--------QYIAIELCAATLQEYVEQKDFAH 115
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTG-----ILKLADFGLARAFSQ 123
E ++QQ +GL ++HS I+HRD+K N+LI+ ++DFGL + +
Sbjct: 116 LGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175
Query: 124 TKNGQVNRYTNRVVTLWYRPPELLLGD--RNYGPPVDLWGAGCIMAEMWTR-SPIMQGNT 180
++ R T + PE+L D N VD++ AGC+ + + S +
Sbjct: 176 GRHSFSRRSG-VPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL 234
Query: 181 EQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLD 240
++Q L+ S+ E A+ +L++
Sbjct: 235 QRQANILLGA--CSLDCLHPEKHED---------VIAR------------------ELIE 265
Query: 241 KLLLLDPSKRFDSDAALNHDFFWT 264
K++ +DP KR + L H FFW+
Sbjct: 266 KMIAMDPQKRPSAKHVLKHPFFWS 289
Score = 40.9 bits (96), Expect = 6e-04
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWT 369
+L++K++ +DP KR + L H FFW+
Sbjct: 262 ELIEKMIAMDPQKRPSAKHVLKHPFFWS 289
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 151 bits (384), Expect = 6e-42
Identities = 62/296 (20%), Positives = 96/296 (32%), Gaps = 56/296 (18%)
Query: 11 LREIKILQLLKH--ENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHVKF 68
EI L L+ + ++ L + T Y+V + DL L
Sbjct: 102 RNEIAYLNKLQQHSDKIIRLYDYEITD--------QYIYMVMECGNIDLNSWLKK-KKSI 152
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
E K + +L ++ IH + I+H D+K AN LI G+LKL DFG+A
Sbjct: 153 DPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ---PDT 208
Query: 129 VNRYTNRVV-TLWYRPPELLLG----------DRNYGPPVDLWGAGCIMAEMWTRSPIMQ 177
+ + V + Y PPE + P D+W GCI+ M Q
Sbjct: 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
Query: 178 GNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCD 237
Q L + + + E E Q D
Sbjct: 269 QIINQISK-LHAIIDPNHEIEFPDIPE----------KDLQ------------------D 299
Query: 238 LLDKLLLLDPSKRFDSDAALNHDFFWTDPMP-SDLSKMLAQHTQSMFEYLAPPRRP 292
+L L DP +R L H + P + ++K + + + L P
Sbjct: 300 VLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSP 355
Score = 34.4 bits (79), Expect = 0.059
Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMP-SDLSKMLAQHTQSMFEYLAPPRRP 397
D+L L DP +R L H + P + ++K + + + L P
Sbjct: 299 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSP 355
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 149 bits (377), Expect = 8e-42
Identities = 51/275 (18%), Positives = 102/275 (37%), Gaps = 49/275 (17%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKAN----QYNRYRSTFYLVFDFCEH-DLAGLLS-- 62
+RE+K L L+H +V K Q + + Y+ C +L ++
Sbjct: 50 VMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGR 109
Query: 63 NIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFS 122
+ + Q+ + ++HS ++HRD+K +N+ T ++K+ DFGL A
Sbjct: 110 CTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD 169
Query: 123 QTKN--------GQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSP 174
Q + R+T +V T Y PE + G +Y VD++ G I+ E+ P
Sbjct: 170 QDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG-NSYSHKVDIFSLGLILFELLY--P 226
Query: 175 IMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQY 234
+T+ +++ ++ + P + +Y
Sbjct: 227 F---STQMERVRTLTDVRNLKFPPLFTQ--------------------------KYPCEY 257
Query: 235 GCDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPS 269
++ +L P +R ++ + + F P
Sbjct: 258 --VMVQDMLSPSPMERPEAINIIENAVFEDLDFPG 290
Score = 30.0 bits (68), Expect = 1.5
Identities = 5/33 (15%), Positives = 13/33 (39%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPS 374
++ +L P +R ++ + + F P
Sbjct: 258 VMVQDMLSPSPMERPEAINIIENAVFEDLDFPG 290
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 147 bits (374), Expect = 3e-41
Identities = 50/254 (19%), Positives = 83/254 (32%), Gaps = 49/254 (19%)
Query: 10 ALREIKIL-QLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHVKF 68
L E+ ++ +H V L + YL + C L
Sbjct: 103 KLAEVGSHEKVGQHPCCVRLEQAWEEG--------GILYLQTELCGPSLQQHCEAWGASL 154
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
++ ++ L L ++HS ++H D+K AN+ + G KL DFGL G+
Sbjct: 155 PEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE 214
Query: 129 VNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQITLI 188
V + Y PELL G +YG D++ G + E+ + G QQ+
Sbjct: 215 V-----QEGDPRYMAPELLQG--SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL--- 264
Query: 189 SQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLLDPS 248
P + + +L +L +L DP
Sbjct: 265 ---RQGYLPPEFTAGLSSEL---------------------------RSVLVMMLEPDPK 294
Query: 249 KRFDSDAALNHDFF 262
R ++A L
Sbjct: 295 LRATAEALLALPVL 308
Score = 29.6 bits (67), Expect = 2.1
Identities = 10/49 (20%), Positives = 16/49 (32%), Gaps = 3/49 (6%)
Query: 322 GYHDRVKERLKPYVKDQY---GCDLLDKLLLLDPSKRFDSDAALNHDFF 367
G+ + L P +L +L DP R ++A L
Sbjct: 260 GWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVL 308
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 147 bits (373), Expect = 8e-41
Identities = 62/256 (24%), Positives = 103/256 (40%), Gaps = 48/256 (18%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNI-HVK 67
+ RE+ +L +KH N+V E + Y+V D+CE DL ++ V
Sbjct: 70 SRREVAVLANMKHPNIVQYRESFEEN--------GSLYIVMDYCEGGDLFKRINAQKGVL 121
Query: 68 FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNG 127
F +I Q+ L ++H KILHRD+K+ N+ +TK G ++L DFG+AR + T
Sbjct: 122 FQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE- 180
Query: 128 QVNRYTNRVV-TLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQIT 186
+ T +Y PE+ ++ Y D+W GC++ E+ T + + + +
Sbjct: 181 ----LARACIGTPYYLSPEICE-NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVL 235
Query: 187 LISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLLD 246
I GS P + DL L+ +L +
Sbjct: 236 KIIS--GSFPP--VSLHYSYDL---------------------------RSLVSQLFKRN 264
Query: 247 PSKRFDSDAALNHDFF 262
P R ++ L F
Sbjct: 265 PRDRPSVNSILEKGFI 280
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 145 bits (368), Expect = 8e-41
Identities = 56/263 (21%), Positives = 101/263 (38%), Gaps = 53/263 (20%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNI---H 65
+ E+ +L+ LKH N+V + + N Y+V ++CE DLA +++
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTT------LYIVMEYCEGGDLASVITKGTKER 105
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHS-----NKILHRDMKAANVLITKTGILKLADFGLARA 120
+ +V+ QL L H + +LHRD+K ANV + +KL DFGLAR
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
Query: 121 FSQTKNGQVNRYTNRVV-TLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGN 179
+ + + V T +Y PE + +Y D+W GC++ E+ P
Sbjct: 166 LNHDTS-----FAKTFVGTPYYMSPEQMNR-MSYNEKSDIWSLGCLLYELCALMPPFTAF 219
Query: 180 TEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLL 239
++++ I + G P + +L +++
Sbjct: 220 SQKELAGKIRE--GKFRR--IPYRYSDEL---------------------------NEII 248
Query: 240 DKLLLLDPSKRFDSDAALNHDFF 262
++L L R + L +
Sbjct: 249 TRMLNLKDYHRPSVEEILENPLI 271
Score = 27.6 bits (62), Expect = 8.7
Identities = 4/26 (15%), Positives = 11/26 (42%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF 367
+++ ++L L R + L +
Sbjct: 246 EIITRMLNLKDYHRPSVEEILENPLI 271
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 147 bits (373), Expect = 5e-40
Identities = 55/284 (19%), Positives = 101/284 (35%), Gaps = 64/284 (22%)
Query: 10 ALREIKILQ-LLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLA------GLLS 62
AL EIK+L H NV+ T Y+ + C +L +
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCSETTDRF--------LYIALELCNLNLQDLVESKNVSD 106
Query: 63 NIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGI------------- 109
+++Q+ +G+ ++HS KI+HRD+K N+L++ +
Sbjct: 107 ENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166
Query: 110 LKLADFGLARAFSQTKNGQVNRYTNRVVTLWYRPPELLLGD------RNYGPPVDLWGAG 163
+ ++DFGL + ++ N T +R PELL R +D++ G
Sbjct: 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
Query: 164 CIMAEMWT--RSPIMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRK 221
C+ + + + P + + I + G ++ E+ R
Sbjct: 227 CVFYYILSKGKHPFGDKYSRESNI-----IRGI--------------FSLDEMKCLHDRS 267
Query: 222 VKERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTD 265
+ DL+ +++ DP KR + L H FW
Sbjct: 268 LIAEAT---------DLISQMIDHDPLKRPTAMKVLRHPLFWPK 302
Score = 41.7 bits (98), Expect = 4e-04
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTD 370
DL+ +++ DP KR + L H FW
Sbjct: 274 DLISQMIDHDPLKRPTAMKVLRHPLFWPK 302
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 146 bits (371), Expect = 9e-40
Identities = 72/289 (24%), Positives = 125/289 (43%), Gaps = 52/289 (17%)
Query: 10 ALREIKILQLLKHE------NVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLL-S 62
A EI+IL+ L+ + NV+H++E +R+ + F+ +L L+
Sbjct: 140 AAEEIRILEHLRKQDKDNTMNVIHMLE--------NFTFRNHICMTFELLSMNLYELIKK 191
Query: 63 NIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT--KTGILKLADFGLARA 120
N FSL ++K +L L +H N+I+H D+K N+L+ +K+ DFG +
Sbjct: 192 NKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251
Query: 121 FSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNT 180
Q V Y + + +YR PE++LG YG P+D+W GCI+AE+ T P++ G
Sbjct: 252 EHQR----VYTY---IQSRFYRAPEVILG-ARYGMPIDMWSLGCILAELLTGYPLLPGED 303
Query: 181 EQQQITLISQLCGSI---------------TPESWPGVETLDLYNKMELPKAQKRKVKER 225
E Q+ + +L G + + +P T+ + + R + +
Sbjct: 304 EGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGK 363
Query: 226 LKPYVKDQYGC------------DLLDKLLLLDPSKRFDSDAALNHDFF 262
L+ + + D L + L DP+ R AL H +
Sbjct: 364 LRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
Score = 39.3 bits (92), Expect = 0.002
Identities = 14/104 (13%), Positives = 26/104 (25%), Gaps = 20/104 (19%)
Query: 282 MFEYLAPPRRPGHM--RAHHHHHHAGAPGAAGPAAGRATTETGYHDRVKERLKPYVKDQY 339
M E L P + + + + G ++ + ++
Sbjct: 311 MIELLGMP--SQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPP 368
Query: 340 GC----------------DLLDKLLLLDPSKRFDSDAALNHDFF 367
D L + L DP+ R AL H +
Sbjct: 369 ESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 141 bits (357), Expect = 9e-39
Identities = 48/271 (17%), Positives = 92/271 (33%), Gaps = 44/271 (16%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVK- 67
A RE + +L H N++ L+ C + + +L+ F + L + + K
Sbjct: 73 AQREADMHRLFNHPNILRLVAYCLRERGAKHE----AWLLLPFFKRGTLWNEIERLKDKG 128
Query: 68 --FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLAR-----A 120
+ +I ++ + GL IH+ HRD+K N+L+ G L D G
Sbjct: 129 NFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV 188
Query: 121 FSQTKNGQVNRYTNRVVTLWYRPPELLLGDRN--YGPPVDLWGAGCIMAEMWTRSPIMQG 178
+ + + + T+ YR PEL + D+W GC++ M
Sbjct: 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
Query: 179 NTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDL 238
++ ++ + ++ P + L L
Sbjct: 249 VFQKGD-SVALAVQNQLSIPQSP-------------------RHSSALW---------QL 279
Query: 239 LDKLLLLDPSKRFDSDAALNHDFFWTDPMPS 269
L+ ++ +DP +R L+ P P
Sbjct: 280 LNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 138 bits (350), Expect = 8e-38
Identities = 63/280 (22%), Positives = 102/280 (36%), Gaps = 57/280 (20%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNI---H 65
++EI +L+ L H NV+ + +V + + DL+ ++ +
Sbjct: 79 CIKEIDLLKQLNHPNVIKYYASFIED--------NELNIVLELADAGDLSRMIKHFKKQK 130
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
+ K QL + L ++HS +++HRD+K ANV IT TG++KL D GL R FS
Sbjct: 131 RLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 190
Query: 126 NGQVNRYTNRVV-TLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQ 184
+ +V T +Y PE + Y D+W GC++ EM G+
Sbjct: 191 T-----AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-- 242
Query: 185 ITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQY---GCDLLDK 241
+ LC I + P D Y L++
Sbjct: 243 ---LYSLCKKI--------------------------EQCDYPPLPSDHYSEELRQLVNM 273
Query: 242 LLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQS 281
+ DP KR D + M + + L H
Sbjct: 274 CINPDPEKRPDVTYVYDVAKR----MHACTASSLEHHHHH 309
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 139 bits (352), Expect = 1e-37
Identities = 76/329 (23%), Positives = 128/329 (38%), Gaps = 52/329 (15%)
Query: 9 TALREIKILQLLKHENVVHLIEICRTKANQYN--RYRSTFY----------LVFDFCEHD 56
A EIK+LQ + + + + F +VF+ +
Sbjct: 61 AAEDEIKLLQRVNDADNTK-----EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGEN 115
Query: 57 LAGLL-SNIHVKFSLGEIKKVIQQLLNGLYYIHSN-KILHRDMKAANVLI------TKTG 108
L L+ H L +K++ +QLL GL Y+H I+H D+K NVL+
Sbjct: 116 LLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLI 175
Query: 109 ILKLADFGLARAFSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAE 168
+K+AD G A + + YTN + T YR PE+LLG +G D+W C++ E
Sbjct: 176 QIKIADLGNACWYDE-------HYTNSIQTREYRSPEVLLG-APWGCGADIWSTACLIFE 227
Query: 169 MWTRSPIMQGNT------EQQQITLISQLCGSITPE-SWPGVETLDLYNKMELPKAQKRK 221
+ T + + + + I I +L G + G T +N L + +
Sbjct: 228 LITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKL 287
Query: 222 VKERLKPYVKDQYGC---------DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLS 272
L+ + ++Y D L +L LDP KR D+ +NH + D + +
Sbjct: 288 KFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL-KDTLGMEEI 346
Query: 273 KMLAQHTQSMFEYLAPPRRPGHMRAHHHH 301
++ + + P +R H H
Sbjct: 347 RVPDRELYGSGSDI--PGWFEEVRDHKRH 373
Score = 43.9 bits (104), Expect = 7e-05
Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 38/148 (25%)
Query: 274 MLAQHTQSMFEYLAPPRRPGHM--RAHHHHHHAGAPGAAGPAAGRATTETGYHDRVKE-- 329
+AQ + E L P ++ + G + +
Sbjct: 249 HIAQ----IIELLGEL--PSYLLRNGKYTRTFF--------------NSRGLLRNISKLK 288
Query: 330 --RLKPYVKDQYGC---------DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSK 378
L+ + ++Y D L +L LDP KR D+ +NH + D + + +
Sbjct: 289 FWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL-KDTLGMEEIR 347
Query: 379 MLAQHTQSMFEYLAPPRRPGHMRAHHHH 406
+ + + P +R H H
Sbjct: 348 VPDRELYGSGSDI--PGWFEEVRDHKRH 373
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 139 bits (351), Expect = 2e-37
Identities = 38/276 (13%), Positives = 68/276 (24%), Gaps = 55/276 (19%)
Query: 12 REIKILQLLKHENVVHLIE------------------ICRTKANQYNRYRSTFYLVFDFC 53
L E+ + + Q + + + L+
Sbjct: 111 EATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAA 170
Query: 54 EHDLAGLLSNI------HVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKT 107
DL L S + + + + QL+ + S ++H N+ I
Sbjct: 171 SVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPD 230
Query: 108 GILKLADFGLARAFSQTKNGQVNRYTNRVVTLWYRPPELLLGDRN-YGPPVDLWGAGCIM 166
G L L D R V + Y P E L + ++ W G +
Sbjct: 231 GRLMLGDVSALWKVGT-------RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSI 283
Query: 167 AEMWTRSPIMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERL 226
+W T + + +S L
Sbjct: 284 YRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLA------------------FGSCTPL 325
Query: 227 KPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFF 262
+VK L+ + L D +R A+ F
Sbjct: 326 PDFVK-----TLIGRFLNFDRRRRLLPLEAMETPEF 356
Score = 35.0 bits (80), Expect = 0.044
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF 367
L+ + L D +R A+ F
Sbjct: 331 TLIGRFLNFDRRRRLLPLEAMETPEF 356
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 137 bits (346), Expect = 3e-37
Identities = 53/267 (19%), Positives = 95/267 (35%), Gaps = 36/267 (13%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
+RE ++L+ L H+N+V L I ++ L+ +FC L +L +
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRH------KVLIMEFCPCGSLYTVLEEPSNAYG 108
Query: 70 LGE--IKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKT----GILKLADFGLARAFSQ 123
L E V++ ++ G+ ++ N I+HR++K N++ + KL DFG AR
Sbjct: 109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168
Query: 124 TKNGQVNRYTNRVVTLWYRPPELLLGD-------RNYGPPVDLWGAGCIMAEMWTRSP-- 174
+ + + T Y P++ + YG VDLW G T S
Sbjct: 169 DEQ-----FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
Query: 175 --IMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKD 232
++ + I S E + ++P L ++
Sbjct: 224 RPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPV------SCSLSRGLQV 277
Query: 233 QYGCDLLDKLLLLDPSKRFDSDAALNH 259
+L +L D K + D
Sbjct: 278 L-LTPVLANILEADQEKCWGFDQFFAE 303
Score = 29.3 bits (66), Expect = 2.2
Identities = 6/42 (14%), Positives = 12/42 (28%), Gaps = 5/42 (11%)
Query: 323 YHDRVKERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNH 364
+ L+ + +L +L D K + D
Sbjct: 267 VSCSLSRGLQVLLTP-----VLANILEADQEKCWGFDQFFAE 303
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 140 bits (354), Expect = 6e-37
Identities = 65/259 (25%), Positives = 113/259 (43%), Gaps = 54/259 (20%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI--HV 66
L E+ +L+LL H N++ L + K N +YLV + + G L I +
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRN--------YYLVMECYK----GGELFDEIIHRM 131
Query: 67 KFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT---KTGILKLADFGLARAFSQ 123
KF+ + +I+Q+L+G+ Y+H + I+HRD+K N+L+ K ++K+ DFGL+ F
Sbjct: 132 KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191
Query: 124 TKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQ 183
K + R+ T +Y PE+L + Y D+W G I+ + P G T+Q+
Sbjct: 192 QK-----KMKERLGTAYYIAPEVL--RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE 244
Query: 184 QITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLL 243
+ + + + W V A+ DL+ ++L
Sbjct: 245 ILRKVEKGKYTFDSPEWKNVS----------EGAK------------------DLIKQML 276
Query: 244 LLDPSKRFDSDAALNHDFF 262
D +R + AL H +
Sbjct: 277 QFDSQRRISAQQALEHPWI 295
Score = 32.7 bits (75), Expect = 0.24
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF 367
DL+ ++L D +R + AL H +
Sbjct: 270 DLIKQMLQFDSQRRISAQQALEHPWI 295
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 139 bits (353), Expect = 6e-37
Identities = 67/259 (25%), Positives = 113/259 (43%), Gaps = 54/259 (20%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI--HV 66
LRE+++L+ L H N++ L E K FYLV + G L I
Sbjct: 74 LREVQLLKQLDHPNIMKLYEFFEDKGY--------FYLVGEVYT----GGELFDEIISRK 121
Query: 67 KFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT---KTGILKLADFGLARAFSQ 123
+FS + ++I+Q+L+G+ Y+H NKI+HRD+K N+L+ K +++ DFGL+ F
Sbjct: 122 RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181
Query: 124 TKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQ 183
+K + +++ T +Y PE+L Y D+W G I+ + + P G E
Sbjct: 182 SK-----KMKDKIGTAYYIAPEVL--HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYD 234
Query: 184 QITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLL 243
+ + + + W V A+ DL+ K+L
Sbjct: 235 ILKKVEKGKYTFELPQWKKVS----------ESAK------------------DLIRKML 266
Query: 244 LLDPSKRFDSDAALNHDFF 262
PS R + AL+H++
Sbjct: 267 TYVPSMRISARDALDHEWI 285
Score = 33.1 bits (76), Expect = 0.19
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF 367
DL+ K+L PS R + AL+H++
Sbjct: 260 DLIRKMLTYVPSMRISARDALDHEWI 285
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 139 bits (351), Expect = 1e-36
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 54/256 (21%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI--HV 66
EI +L+ L H N++ L ++ K FYLV +F E G L I
Sbjct: 94 YNEISLLKSLDHPNIIKLFDVFEDKKY--------FYLVTEFYE----GGELFEQIINRH 141
Query: 67 KFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTG---ILKLADFGLARAFSQ 123
KF + +++Q+L+G+ Y+H + I+HRD+K N+L+ +K+ DFGL+ FS+
Sbjct: 142 KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK 201
Query: 124 TKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQ 183
+ +R+ T +Y PE+L + Y D+W G IM + P G +Q
Sbjct: 202 DY-----KLRDRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD 254
Query: 184 QITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLL 243
I + + W + +A+ +L+ +L
Sbjct: 255 IIKKVEKGKYYFDFNDWKNIS----------DEAK------------------ELIKLML 286
Query: 244 LLDPSKRFDSDAALNH 259
D +KR ++ ALN
Sbjct: 287 TYDYNKRCTAEEALNS 302
Score = 32.4 bits (74), Expect = 0.27
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
+L+ +L D +KR ++ ALN
Sbjct: 280 ELIKLMLTYDYNKRCTAEEALNS 302
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 140 bits (354), Expect = 2e-36
Identities = 62/287 (21%), Positives = 103/287 (35%), Gaps = 26/287 (9%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFSL 70
EI+I++ L H NVV E+ Q L ++CE DL L+ L
Sbjct: 61 LEIQIMKKLNHPNVVSAREVPDGL--QKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGL 118
Query: 71 GE--IKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTG---ILKLADFGLARAFSQTK 125
E I+ ++ + + L Y+H N+I+HRD+K N+++ I K+ D G A+ Q +
Sbjct: 119 KEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE 178
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT-RSPIMQGNTEQQQ 184
T V TL Y PELL + Y VD W G + E T P + Q
Sbjct: 179 L-----CTEFVGTLQYLAPELLEQ-KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQW 232
Query: 185 ITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLL 244
+ + + + + P + +L+ L +L+
Sbjct: 233 HGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLER---------WLQCMLM 283
Query: 245 LDPSKRFDSDAALNHDFF--WTDPMPSDLSKMLAQHTQSMFEYLAPP 289
+R N F + L ++ + + Y
Sbjct: 284 WHQRQRGTDPQNPNVGCFQALDSILSLKLLSVMNMVSGRVHTYPVTE 330
Score = 28.5 bits (63), Expect = 4.8
Identities = 7/55 (12%), Positives = 15/55 (27%), Gaps = 2/55 (3%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF--WTDPMPSDLSKMLAQHTQSMFEYLAPP 394
L +L+ +R N F + L ++ + + Y
Sbjct: 276 RWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLKLLSVMNMVSGRVHTYPVTE 330
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 137 bits (347), Expect = 5e-36
Identities = 64/256 (25%), Positives = 109/256 (42%), Gaps = 54/256 (21%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI--HV 66
LRE+++L+ L H N++ L EI ++ FY+V + G L I
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSS--------FYIVGELYT----GGELFDEIIKRK 116
Query: 67 KFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT---KTGILKLADFGLARAFSQ 123
+FS + ++I+Q+ +G+ Y+H + I+HRD+K N+L+ K +K+ DFGL+ F Q
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 124 TKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQ 183
+ +R+ T +Y PE+L Y D+W AG I+ + + +P G E
Sbjct: 177 NT-----KMKDRIGTAYYIAPEVL--RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYD 229
Query: 184 QITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLL 243
+ + + W + A+ DL+ K+L
Sbjct: 230 ILKRVETGKYAFDLPQWRTIS----------DDAK------------------DLIRKML 261
Query: 244 LLDPSKRFDSDAALNH 259
PS R + L H
Sbjct: 262 TFHPSLRITATQCLEH 277
Score = 32.7 bits (75), Expect = 0.21
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
DL+ K+L PS R + L H
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEH 277
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 135 bits (341), Expect = 5e-36
Identities = 72/296 (24%), Positives = 116/296 (39%), Gaps = 59/296 (19%)
Query: 10 ALREIKILQLLKHE------NVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLL-S 62
A E+++L+L+ +VHL + +R+ LVF+ ++L LL +
Sbjct: 97 AQIEVRLLELMNKHDTEMKYYIVHLKR--------HFMFRNHLCLVFEMLSYNLYDLLRN 148
Query: 63 NIHVKFSLGEIKKVIQQLLNGLYYIHSNK--ILHRDMKAANVLIT--KTGILKLADFGLA 118
SL +K QQ+ L ++ + + I+H D+K N+L+ K +K+ DFG +
Sbjct: 149 TNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208
Query: 119 RAFSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQG 178
Q + +Y + + +YR PE+LLG Y +D+W GCI+ EM T P+ G
Sbjct: 209 CQLGQR----IYQY---IQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSG 260
Query: 179 NTEQQQITLISQLCGSITPE--------------------------------SWPGVETL 206
E Q+ I ++ G PG L
Sbjct: 261 ANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKL 320
Query: 207 DLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFF 262
+E R+ E DL+ ++L DP R AL H FF
Sbjct: 321 HNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFF 376
Score = 38.9 bits (91), Expect = 0.002
Identities = 13/44 (29%), Positives = 16/44 (36%)
Query: 324 HDRVKERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFF 367
R E DL+ ++L DP R AL H FF
Sbjct: 333 GRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFF 376
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 135 bits (342), Expect = 9e-36
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 60/278 (21%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI--HVK 67
EI+IL+ L H ++ + + +Y+V + E G L + + +
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAE---------DYYIVLELME----GGELFDKVVGNKR 235
Query: 68 FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT---KTGILKLADFGLARAFSQT 124
K Q+L + Y+H N I+HRD+K NVL++ + ++K+ DFG ++
Sbjct: 236 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--- 292
Query: 125 KNGQVNRYTNRVVTLWYRPPELLLGD--RNYGPPVDLWGAGCIMAEMWT-RSPIMQGNTE 181
G+ + T Y PE+L+ Y VD W G I+ + P + T+
Sbjct: 293 --GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 350
Query: 182 QQQITLISQLCGSIT--PESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLL 239
I G PE W V KA DL+
Sbjct: 351 VSLKDQI--TSGKYNFIPEVWAEVS----------EKAL------------------DLV 380
Query: 240 DKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQ 277
KLL++DP RF ++ AL H + + M +L++
Sbjct: 381 KKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSE 418
Score = 39.7 bits (93), Expect = 0.002
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQ 382
DL+ KLL++DP RF ++ AL H + + M +L++
Sbjct: 378 DLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSE 418
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 133 bits (337), Expect = 9e-36
Identities = 57/294 (19%), Positives = 106/294 (36%), Gaps = 79/294 (26%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCE----------------- 54
E+++++ L H N+ L E+ + LV + C
Sbjct: 77 TEVRLMKKLHHPNIARLYEVYEDEQY--------ICLVMELCHGGHLLDKLNVFIDDSTG 128
Query: 55 -----------------------HDLAGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNK 91
+ G ++ I +++Q+ + L+Y+H+
Sbjct: 129 KCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG 188
Query: 92 ILHRDMKAANVLIT--KTGILKLADFGLARAFSQTKNGQVNRYTNRVVTLWYRPPELLLG 149
I HRD+K N L + K+ +KL DFGL++ F + NG+ T + T ++ PE+L
Sbjct: 189 ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT 248
Query: 150 -DRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQITLISQLCGSITPESWPGVETLDL 208
+ +YGP D W AG ++ + + G + I+ + ++
Sbjct: 249 TNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYN------- 301
Query: 209 YNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFF 262
+ + DLL LL + +RFD+ AL H +
Sbjct: 302 ------------VLSPLAR---------DLLSNLLNRNVDERFDAMRALQHPWI 334
Score = 35.2 bits (81), Expect = 0.032
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF 367
DLL LL + +RFD+ AL H +
Sbjct: 309 DLLSNLLNRNVDERFDAMRALQHPWI 334
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 131 bits (331), Expect = 5e-35
Identities = 62/280 (22%), Positives = 106/280 (37%), Gaps = 64/280 (22%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI--HVK 67
EI+IL+ L H ++ + + +Y+V + E G L + + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED---------YYIVLELME----GGELFDKVVGNKR 110
Query: 68 FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTG---ILKLADFGLARAFSQT 124
K Q+L + Y+H N I+HRD+K NVL++ ++K+ DFG ++ +T
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 125 KNGQVNRYTNRVVTLWYRPPELLLGD--RNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQ 182
T Y PE+L+ Y VD W G I+ I
Sbjct: 171 S-----LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-------IC------ 212
Query: 183 QQITLISQLCGSITPESWPGVETLDLYNKM-----ELPKAQKRKVKERLKPYVKDQYGCD 237
L G P + L +++ +V E+ D
Sbjct: 213 --------LSG--YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL---------D 253
Query: 238 LLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQ 277
L+ KLL++DP RF ++ AL H + + M +L++
Sbjct: 254 LVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSE 293
Score = 41.1 bits (97), Expect = 4e-04
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQ 382
DL+ KLL++DP RF ++ AL H + + M +L++
Sbjct: 253 DLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSE 293
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 131 bits (331), Expect = 2e-34
Identities = 53/267 (19%), Positives = 95/267 (35%), Gaps = 36/267 (13%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
+RE ++L+ L H+N+V L I ++ L+ +FC L +L +
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRH------KVLIMEFCPCGSLYTVLEEPSNAYG 108
Query: 70 LGE--IKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKT----GILKLADFGLARAFSQ 123
L E V++ ++ G+ ++ N I+HR++K N++ + KL DFG AR
Sbjct: 109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168
Query: 124 TKNGQVNRYTNRVVTLWYRPPELLLGD-------RNYGPPVDLWGAGCIMAEMWTRSP-- 174
+ + + T Y P++ + YG VDLW G T S
Sbjct: 169 DEQ-----FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
Query: 175 --IMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKD 232
++ + I S E + ++P L ++
Sbjct: 224 RPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPV------SCSLSRGLQV 277
Query: 233 QYGCDLLDKLLLLDPSKRFDSDAALNH 259
+L +L D K + D
Sbjct: 278 LL-TPVLANILEADQEKCWGFDQFFAE 303
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 128 bits (323), Expect = 3e-34
Identities = 65/257 (25%), Positives = 101/257 (39%), Gaps = 58/257 (22%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI--HVK 67
+EI+I++ L H N++ L E + YLV + C G L +
Sbjct: 55 QEIEIMKSLDHPNIIRLYETFEDNTD--------IYLVMELCT----GGELFERVVHKRV 102
Query: 68 FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT---KTGILKLADFGLARAFSQT 124
F + ++++ +L+ + Y H + HRD+K N L LKL DFGLA F
Sbjct: 103 FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162
Query: 125 KNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQ 184
K +V T +Y P++L + YGP D W AG +M + P T+ +
Sbjct: 163 K-----MMRTKVGTPYYVSPQVL--EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV 215
Query: 185 ITLISQLCGSIT--PESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKL 242
+ I G+ T + W V P+A+ L+ +L
Sbjct: 216 MLKI--REGTFTFPEKDWLNVS----------PQAE------------------SLIRRL 245
Query: 243 LLLDPSKRFDSDAALNH 259
L P +R S AL H
Sbjct: 246 LTKSPKQRITSLQALEH 262
Score = 33.0 bits (76), Expect = 0.17
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
L+ +LL P +R S AL H
Sbjct: 240 SLIRRLLTKSPKQRITSLQALEH 262
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 128 bits (323), Expect = 3e-34
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 58/257 (22%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI--HVK 67
RE+++L+ L H N++ L EI ++ FY+V + G L I +
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSS--------FYIVGELYT----GGELFDEIIKRKR 117
Query: 68 FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT---KTGILKLADFGLARAFSQT 124
FS + ++I+Q+ +G+ Y+H + I+HRD+K N+L+ K +K+ DFGL+ F Q
Sbjct: 118 FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
Query: 125 KNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQ 184
+ +R+ T +Y PE+L Y D+W AG I+ + + +P G E
Sbjct: 178 T-----KMKDRIGTAYYIAPEVL--RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI 230
Query: 185 ITLISQLCGSIT--PESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKL 242
+ + G W + A+ DL+ K+
Sbjct: 231 LKRV--ETGKYAFDLPQWRTIS----------DDAK------------------DLIRKM 260
Query: 243 LLLDPSKRFDSDAALNH 259
L PS R + L H
Sbjct: 261 LTFHPSLRITATQCLEH 277
Score = 33.4 bits (77), Expect = 0.11
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
DL+ K+L PS R + L H
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEH 277
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 128 bits (323), Expect = 4e-34
Identities = 61/270 (22%), Positives = 105/270 (38%), Gaps = 65/270 (24%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHV---KF 68
EI I + L H++VV ++V + C L +H
Sbjct: 64 MEISIHRSLAHQHVVGFHGFFEDNDF--------VFVVLELCRR---RSLLELHKRRKAL 112
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
+ E + ++Q++ G Y+H N+++HRD+K N+ + + +K+ DFGLA +
Sbjct: 113 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA--------TK 164
Query: 129 VNRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQ 184
V R L Y PE+L + + VD+W GCIM +
Sbjct: 165 VEYDGERKKVLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTL--------------- 208
Query: 185 ITLISQLCGSITPESWPGVETLD---LYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDK 241
L G P ET Y ++ +K + + ++ L+ K
Sbjct: 209 ------LVGK------PPFETSCLKETYLRI-------KKNEYSIPKHINPV-AASLIQK 248
Query: 242 LLLLDPSKRFDSDAALNHDFFWTDPMPSDL 271
+L DP+ R + LN +FF + +P+ L
Sbjct: 249 MLQTDPTARPTINELLNDEFFTSGYIPARL 278
Score = 36.8 bits (86), Expect = 0.010
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDL 376
L+ K+L DP+ R + LN +FF + +P+ L
Sbjct: 244 SLIQKMLQTDPTARPTINELLNDEFFTSGYIPARL 278
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 128 bits (324), Expect = 5e-34
Identities = 46/261 (17%), Positives = 96/261 (36%), Gaps = 53/261 (20%)
Query: 13 EIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLS--NIHVKFS 69
+I+ + +N V Q + + Y+ C +L ++
Sbjct: 111 KIRRMDPFSTKNTVGQ--------LQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ- 128
G + Q+ + ++HS ++HRD+K +N+ T ++K+ DFGL A Q + Q
Sbjct: 163 HGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
Query: 129 -------VNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTE 181
+T +V T Y PE + G NY VD++ G I+ E+ T+
Sbjct: 223 VLTPMPAYATHTGQVGTKLYMSPEQIHG-NNYSHKVDIFSLGLILFELLYSFS-----TQ 276
Query: 182 QQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDK 241
+++ +I+ + P + ++ ++
Sbjct: 277 MERVRIITDVRNLKFPLLFT--------------------------QKYPQEH--MMVQD 308
Query: 242 LLLLDPSKRFDSDAALNHDFF 262
+L P++R ++ + + F
Sbjct: 309 MLSPSPTERPEATDIIENAIF 329
Score = 29.1 bits (65), Expect = 3.2
Identities = 4/27 (14%), Positives = 13/27 (48%)
Query: 341 CDLLDKLLLLDPSKRFDSDAALNHDFF 367
++ +L P++R ++ + + F
Sbjct: 303 HMMVQDMLSPSPTERPEATDIIENAIF 329
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 128 bits (324), Expect = 8e-34
Identities = 58/275 (21%), Positives = 99/275 (36%), Gaps = 64/275 (23%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCE--------HDLAGLLSN 63
E++I+ +K+E + I Y+++++ E L N
Sbjct: 92 NELQIITDIKNEYCLTCEGIITNYDE--------VYIIYEYMENDSILKFDEYFFVLDKN 143
Query: 64 IHVKFSLGEIKKVIQQLLNGLYYIHSNK-ILHRDMKAANVLITKTGILKLADFGLARAFS 122
+ IK +I+ +LN YIH+ K I HRD+K +N+L+ K G +KL+DFG +
Sbjct: 144 YTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMV 203
Query: 123 QTKNGQVNRYTNRVVTLWYRPPELLLGDRNY-GPPVDLWGAGCIMAEMWTRSPIMQGNTE 181
K T + PPE + +Y G VD+W G + M
Sbjct: 204 DKK-----IKG-SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM------------ 245
Query: 182 QQQITLISQLCGSITP---ESWPGVETLDLYNK-----MELPKAQKRKVKERLKPYVKDQ 233
P + ++L+N +E P + +
Sbjct: 246 ---------FYNV-VPFSLKI----SLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCS 291
Query: 234 YG------CDLLDKLLLLDPSKRFDSDAALNHDFF 262
D L L +P++R S+ AL H++
Sbjct: 292 NNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326
Score = 35.1 bits (81), Expect = 0.040
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF 367
D L L +P++R S+ AL H++
Sbjct: 301 DFLKLFLRKNPAERITSEDALKHEWL 326
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 127 bits (322), Expect = 1e-33
Identities = 61/271 (22%), Positives = 105/271 (38%), Gaps = 65/271 (23%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHV---KF 68
EI I + L H++VV ++V + C L +H
Sbjct: 90 MEISIHRSLAHQHVVGFHGFFEDNDF--------VFVVLELCRR---RSLLELHKRRKAL 138
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
+ E + ++Q++ G Y+H N+++HRD+K N+ + + +K+ DFGLA +
Sbjct: 139 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA--------TK 190
Query: 129 VNRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQ 184
V R L Y PE+L + + VD+W GCIM +
Sbjct: 191 VEYDGERKKVLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTL--------------- 234
Query: 185 ITLISQLCGSITPESWPGVETLD---LYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDK 241
L G P ET Y ++ +K + + ++ L+ K
Sbjct: 235 ------LVGK------PPFETSCLKETYLRI-------KKNEYSIPKHINPV-AASLIQK 274
Query: 242 LLLLDPSKRFDSDAALNHDFFWTDPMPSDLS 272
+L DP+ R + LN +FF + +P+ L
Sbjct: 275 MLQTDPTARPTINELLNDEFFTSGYIPARLP 305
Score = 36.9 bits (86), Expect = 0.011
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLS 377
L+ K+L DP+ R + LN +FF + +P+ L
Sbjct: 270 SLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLP 305
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 127 bits (321), Expect = 2e-33
Identities = 61/291 (20%), Positives = 110/291 (37%), Gaps = 54/291 (18%)
Query: 10 ALREIKILQLLKHE------NVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLL-S 62
A EI++L+ L V ++E + + +VF+ +
Sbjct: 58 ARSEIQVLEHLNTTDPNSTFRCVQMLE--------WFEHHGHICIVFELLGLSTYDFIKE 109
Query: 63 NIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT----------------- 105
N + F L I+K+ Q+ + ++HSNK+ H D+K N+L
Sbjct: 110 NGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDER 169
Query: 106 --KTGILKLADFGLARAFSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAG 163
+K+ DFG S T + + + T V T YR PE++L + P D+W G
Sbjct: 170 TLINPDIKVVDFG-----SATYDDE-HHST-LVSTRHYRAPEVILALG-WSQPCDVWSIG 221
Query: 164 CIMAEMWTRSPIMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVK 223
CI+ E + + + ++ + ++ ++ G + ++ L +
Sbjct: 222 CILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAG 281
Query: 224 ERLKPYVK------------DQYGCDLLDKLLLLDPSKRFDSDAALNHDFF 262
+ K + DL+ K+L DP+KR AL H FF
Sbjct: 282 RYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFF 332
Score = 43.0 bits (102), Expect = 1e-04
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 9/96 (9%)
Query: 277 QHTQSMFEYLAPPRRPGHM----RAHHHHHHAGAPGAAGPAAGRATTETGYHDRVKERLK 332
+H M L P P HM R + HH +AGR + +KE +
Sbjct: 241 EHLAMMERILGPL--PKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRA--CKPLKEFML 296
Query: 333 PYVKDQYGC-DLLDKLLLLDPSKRFDSDAALNHDFF 367
+ DL+ K+L DP+KR AL H FF
Sbjct: 297 SQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 127 bits (322), Expect = 2e-33
Identities = 63/286 (22%), Positives = 113/286 (39%), Gaps = 44/286 (15%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYN--RYRSTFY------LVFDFCEHDLAGLL 61
A EI +L+ +K ++ K N++ F + F+ + L
Sbjct: 63 ARLEINVLKKIKEKD----------KENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFL 112
Query: 62 -SNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARA 120
N + L ++ + QL + L ++H N++ H D+K N+L + L + +
Sbjct: 113 KENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172
Query: 121 FSQTKNGQV------------NRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAE 168
KN + +T V T YRPPE++L + P D+W GCI+ E
Sbjct: 173 EKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFE 231
Query: 169 MWTRSPIMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELP----KAQKRKVKE 224
+ + Q + ++ + ++ ++ G I + K L + R VKE
Sbjct: 232 YYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKE 291
Query: 225 RLKP--------YVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFF 262
KP ++ DL+ ++L DP++R AL H FF
Sbjct: 292 NCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337
Score = 43.1 bits (102), Expect = 1e-04
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 9/96 (9%)
Query: 277 QHTQSMFEYLAPPRRPGHM----RAHHHHHHAGAPGAAGPAAGRATTETGYHDRVKERLK 332
+H M + L P P HM R + + G + GR E +K +
Sbjct: 246 EHLVMMEKILGPI--PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKE--NCKPLKSYML 301
Query: 333 PYVKDQYGC-DLLDKLLLLDPSKRFDSDAALNHDFF 367
+ DL+ ++L DP++R AL H FF
Sbjct: 302 QDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 125 bits (316), Expect = 3e-33
Identities = 62/264 (23%), Positives = 106/264 (40%), Gaps = 56/264 (21%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFSL 70
E+KI LKH +++ L YLV + C + ++ L N FS
Sbjct: 60 NEVKIHCQLKHPSILELYNYFEDSNY--------VYLVLEMCHNGEMNRYLKNRVKPFSE 111
Query: 71 GEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQVN 130
E + + Q++ G+ Y+HS+ ILHRD+ +N+L+T+ +K+ADFGLA + + +
Sbjct: 112 NEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLA-TQLKMPHEK-- 168
Query: 131 RYTNRVV--TLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQITLI 188
YT + T Y PE+ +G D+W GC+ +
Sbjct: 169 HYT---LCGTPNYISPEIATR-SAHGLESDVWSLGCMFYTL------------------- 205
Query: 189 SQLCGSITPESWPGVETLD---LYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLL 245
L G P +T NK+ + ++ + DL+ +LL
Sbjct: 206 --LIGR------PPFDTDTVKNTLNKV-------VLADYEMPSFLSIE-AKDLIHQLLRR 249
Query: 246 DPSKRFDSDAALNHDFFWTDPMPS 269
+P+ R + L+H F +
Sbjct: 250 NPADRLSLSSVLDHPFMSRNSSTK 273
Score = 32.9 bits (76), Expect = 0.16
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPS 374
DL+ +LL +P+ R + L+H F +
Sbjct: 241 DLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTK 273
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 125 bits (316), Expect = 3e-33
Identities = 68/260 (26%), Positives = 101/260 (38%), Gaps = 63/260 (24%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI--HVK 67
RE +I + L+H N+V L + + ++ YLVFD G L +I
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESF--------HYLVFDLVT----GGELFEDIVAREF 101
Query: 68 FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT---KTGILKLADFGLARAFSQT 124
+S + IQQ+L + Y HSN I+HR++K N+L+ K +KLADFGLA
Sbjct: 102 YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV--- 158
Query: 125 KNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQ-- 182
+ + + T Y PE+L Y PVD+W G I+ + P +
Sbjct: 159 NDSEA--WHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL 215
Query: 183 -QQITLISQLCGSIT--PESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLL 239
QI G+ W V K L+
Sbjct: 216 YAQI-----KAGAYDYPSPEWDTVT--------PEAK--------------------SLI 242
Query: 240 DKLLLLDPSKRFDSDAALNH 259
D +L ++P KR +D AL
Sbjct: 243 DSMLTVNPKKRITADQALKV 262
Score = 33.7 bits (78), Expect = 0.082
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
L+D +L ++P KR +D AL
Sbjct: 240 SLIDSMLTVNPKKRITADQALKV 262
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 124 bits (313), Expect = 1e-32
Identities = 56/255 (21%), Positives = 96/255 (37%), Gaps = 51/255 (20%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCE----HDLAGLLSNIHVK 67
EI++L+ L H N++ + E+ N Y+V + CE +
Sbjct: 69 AEIEVLKSLDHPNIIKIFEVFEDYHN--------MYIVMETCEGGELLERIVSAQARGKA 120
Query: 68 FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT---KTGILKLADFGLARAFSQT 124
S G + ++++Q++N L Y HS ++H+D+K N+L +K+ DFGLA F
Sbjct: 121 LSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD 180
Query: 125 KNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQ 184
+ TN T Y PE+ R+ D+W AG +M + T G + ++
Sbjct: 181 E-----HSTNAAGTALYMAPEVF--KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV 233
Query: 185 ITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLL 244
R + + DLL ++L
Sbjct: 234 QQKA--TYKEPNYAVEC------------------RPLTPQAV---------DLLKQMLT 264
Query: 245 LDPSKRFDSDAALNH 259
DP +R + L+H
Sbjct: 265 KDPERRPSAAQVLHH 279
Score = 32.6 bits (75), Expect = 0.19
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
DLL ++L DP +R + L+H
Sbjct: 257 DLLKQMLTKDPERRPSAAQVLHH 279
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 124 bits (313), Expect = 1e-32
Identities = 54/172 (31%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQY---NRYRSTFYLVFDFCEHD-LAGLLSNIHVK 67
EI + + LKH+N+V QY + + L+ LL +
Sbjct: 68 EEIALHKHLKHKNIV-----------QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGP 116
Query: 68 FSLGE--IKKVIQQLLNGLYYIHSNKILHRDMKAANVLI-TKTGILKLADFGLARAFSQT 124
E I +Q+L GL Y+H N+I+HRD+K NVLI T +G+LK++DFG ++ +
Sbjct: 117 LKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI 176
Query: 125 KNGQVNRYTNRVV-TLWYRPPELLLGDRN-YGPPVDLWGAGCIMAEMWTRSP 174
N T TL Y PE++ YG D+W GC + EM T P
Sbjct: 177 -----NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 223
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 124 bits (314), Expect = 3e-32
Identities = 57/298 (19%), Positives = 110/298 (36%), Gaps = 61/298 (20%)
Query: 10 ALREIKILQLLKHE-----NVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLL-SN 63
A E IL+ ++++ N+V Y L+F+ L ++ N
Sbjct: 78 AKIEADILKKIQNDDINNNNIVKYHG--------KFMYYDHMCLIFEPLGPSLYEIITRN 129
Query: 64 IHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT------------------ 105
+ F + +IK ++L L Y+ + H D+K N+L+
Sbjct: 130 NYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGK 189
Query: 106 -------KTGILKLADFGLARAFSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVD 158
K+ +KL DFG T + + + T YR PE++L + D
Sbjct: 190 KIQIYRTKSTGIKLIDFG-----CATFKSD--YHGSIINTRQYRAPEVILN-LGWDVSSD 241
Query: 159 LWGAGCIMAEMWTRSPIMQGNTEQQQITLISQLCGSITPE-----SWPGVETLDLYNKME 213
+W GC++AE++T S + + + + + ++ + I + ++++
Sbjct: 242 MWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELK 301
Query: 214 LPKAQKRKVKERLKPY---------VKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFF 262
L + +K +K + CD L +L +DP+ R L H F
Sbjct: 302 LAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
Score = 40.4 bits (95), Expect = 8e-04
Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 7/96 (7%)
Query: 277 QHTQSMFEYLAPPRRPGHM--RAHHHHHHAGAPGAAGPAAGRATTETGYHDRVKERLKP- 333
+H M + P P +M A + A + + ++ P
Sbjct: 266 EHLAMMESIIQPI--PKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPL 323
Query: 334 --YVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFF 367
+K + CD L +L +DP+ R L H F
Sbjct: 324 YKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 124 bits (314), Expect = 3e-32
Identities = 67/257 (26%), Positives = 101/257 (39%), Gaps = 57/257 (22%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI--HVK 67
RE +I + L+H N+V L + + ++ YLVFD G L +I
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEESF--------HYLVFDLVT----GGELFEDIVAREF 124
Query: 68 FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT---KTGILKLADFGLARAFSQT 124
+S + IQQ+L + Y HSN I+HR++K N+L+ K +KLADFGLA
Sbjct: 125 YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV--- 181
Query: 125 KNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQ 184
+ + + T Y PE+L Y PVD+W G I+ + P + +
Sbjct: 182 NDSEA--WHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL 238
Query: 185 ITLISQLCGSIT--PESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKL 242
I G+ W V K L+D +
Sbjct: 239 YAQI--KAGAYDYPSPEWDTVT--------PEAK--------------------SLIDSM 268
Query: 243 LLLDPSKRFDSDAALNH 259
L ++P KR +D AL
Sbjct: 269 LTVNPKKRITADQALKV 285
Score = 33.8 bits (78), Expect = 0.10
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
L+D +L ++P KR +D AL
Sbjct: 263 SLIDSMLTVNPKKRITADQALKV 285
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 124 bits (312), Expect = 3e-32
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 15/175 (8%)
Query: 10 ALREIKIL-QLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNI--HV 66
++E+ + +L H N+V + + ++ F L+ + C+ L L +
Sbjct: 72 IIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG 131
Query: 67 KFSLGEIKKVIQQLLNGLYYIHSNK--ILHRDMKAANVLITKTGILKLADFGLAR----- 119
S + K+ Q + ++H K I+HRD+K N+L++ G +KL DFG A
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHY 191
Query: 120 ---AFSQTKNGQVNRYTNRVVTLWYRPPEL--LLGDRNYGPPVDLWGAGCIMAEM 169
++S + V R T YR PE+ L + G D+W GCI+ +
Sbjct: 192 PDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLL 246
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 121 bits (307), Expect = 7e-32
Identities = 62/275 (22%), Positives = 102/275 (37%), Gaps = 65/275 (23%)
Query: 11 LREIKILQLLK-HENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI--H 65
L+E+ IL+ + H N++ L + T F+LVFD + L +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTF--------FFLVFDLMK----KGELFDYLTEK 118
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
V S E +K+++ LL + +H I+HRD+K N+L+ +KL DFG +
Sbjct: 119 VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG- 177
Query: 126 NGQVNRYTNRVVTLWYRPPELLLG-----DRNYGPPVDLWGAGCIMAEMWTRSPIMQGNT 180
+ T Y PE++ YG VD+W G IM + SP
Sbjct: 178 ----EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233
Query: 181 EQ---QQITLISQLCGSIT--PESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYG 235
+ + I + G+ W + K
Sbjct: 234 QMLMLRMI-----MSGNYQFGSPEWDDYS--------DTVK------------------- 261
Query: 236 CDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSD 270
DL+ + L++ P KR+ ++ AL H FF +
Sbjct: 262 -DLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEEV 295
Score = 35.3 bits (82), Expect = 0.030
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSD 375
DL+ + L++ P KR+ ++ AL H FF +
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEEV 295
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 121 bits (305), Expect = 1e-31
Identities = 62/252 (24%), Positives = 98/252 (38%), Gaps = 49/252 (19%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFSL 70
RE++I L+H N++ L YL+ ++ + L + KF
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATR--------VYLILEYAPLGTVYRELQKLS-KFDE 108
Query: 71 GEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQVN 130
I +L N L Y HS +++HRD+K N+L+ G LK+ADFG +
Sbjct: 109 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSR 163
Query: 131 RYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQITLISQ 190
R TL Y PPE++ G R + VDLW G + E
Sbjct: 164 RTD-LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF--------------------- 200
Query: 191 LCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLLDPSKR 250
L G P + + Y ++ +V+ +V + DL+ +LL +PS+R
Sbjct: 201 LVGK-PP--FEANTYQETYKRI-------SRVEFTFPDFVTEG-ARDLISRLLKHNPSQR 249
Query: 251 FDSDAALNHDFF 262
L H +
Sbjct: 250 PMLREVLEHPWI 261
Score = 33.0 bits (76), Expect = 0.15
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF 367
DL+ +LL +PS+R L H +
Sbjct: 236 DLISRLLKHNPSQRPMLREVLEHPWI 261
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 122 bits (308), Expect = 2e-31
Identities = 67/262 (25%), Positives = 106/262 (40%), Gaps = 63/262 (24%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLL-------SNI 64
RE I +LKH ++V L+E + Y+VF+F + L ++
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGM--------LYMVFEFMD---GADLCFEIVKRADA 123
Query: 65 HVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT---KTGILKLADFGLARAF 121
+S ++Q+L L Y H N I+HRD+K VL+ + +KL FG+A
Sbjct: 124 GFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183
Query: 122 SQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTE 181
++G V RV T + PE++ YG PVD+WG G I+ + + G E
Sbjct: 184 G--ESGLV--AGGRVGTPHFMAPEVVKR-EPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
Query: 182 Q--QQITLISQLCGSIT--PESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCD 237
+ + I + G P W + KD
Sbjct: 239 RLFEGI-----IKGKYKMNPRQWSHIS-----------------------ESAKD----- 265
Query: 238 LLDKLLLLDPSKRFDSDAALNH 259
L+ ++L+LDP++R ALNH
Sbjct: 266 LVRRMLMLDPAERITVYEALNH 287
Score = 33.0 bits (76), Expect = 0.15
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
DL+ ++L+LDP++R ALNH
Sbjct: 265 DLVRRMLMLDPAERITVYEALNH 287
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 121 bits (306), Expect = 2e-31
Identities = 62/280 (22%), Positives = 111/280 (39%), Gaps = 56/280 (20%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNIHVKF 68
RE+ IL+ + H NV+ L ++ + + L+ + +G L + K
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTD--------VVLILELV----SGGELFDFLAQKE 110
Query: 69 SLGE--IKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT----KTGILKLADFGLARAFS 122
SL E I+Q+L+G+ Y+H+ KI H D+K N+++ +KL DFGLA
Sbjct: 111 SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 123 QTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQ 182
+ N T + PE++ + G D+W G I + + + G+T+Q
Sbjct: 171 DGV-----EFKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQ 224
Query: 183 QQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKL 242
+ + I+ + E + EL K D + KL
Sbjct: 225 ETLANITSVSYDFDEEFFSHTS--------ELAK--------------------DFIRKL 256
Query: 243 LLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSM 282
L+ + KR AL H W P+ + + + + ++
Sbjct: 257 LVKETRKRLTIQEALRHP--WITPVDNQQAMVRRESVVNL 294
Score = 33.8 bits (78), Expect = 0.086
Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSM 387
D + KLL+ + KR AL H W P+ + + + + ++
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHP--WITPVDNQQAMVRRESVVNL 294
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 120 bits (304), Expect = 3e-31
Identities = 50/255 (19%), Positives = 93/255 (36%), Gaps = 53/255 (20%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI---HV 66
+EI IL + +H N++HL E + ++F+F G + I
Sbjct: 50 KEISILNIARHRNILHLHESFESMEE--------LVMIFEFIS----GLDIFERINTSAF 97
Query: 67 KFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT--KTGILKLADFGLARAFSQT 124
+ + EI + Q+ L ++HS+ I H D++ N++ ++ +K+ +FG AR
Sbjct: 98 ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157
Query: 125 KNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQ 184
+ Y PE+ D D+W G ++ + + T QQ
Sbjct: 158 D-----NFRLLFTAPEYYAPEVHQHD-VVSTATDMWSLGTLVYVLLSGINPFLAETNQQI 211
Query: 185 ITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLL 244
I I + E++ + +A D +D+LL+
Sbjct: 212 IENIMNAEYTFDEEAFKEIS----------IEAM------------------DFVDRLLV 243
Query: 245 LDPSKRFDSDAALNH 259
+ R + AL H
Sbjct: 244 KERKSRMTASEALQH 258
Score = 33.0 bits (76), Expect = 0.17
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
D +D+LL+ + R + AL H
Sbjct: 236 DFVDRLLVKERKSRMTASEALQH 258
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 121 bits (305), Expect = 3e-31
Identities = 58/262 (22%), Positives = 97/262 (37%), Gaps = 57/262 (21%)
Query: 12 REIKIL-QLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI---- 64
+E+ Q ++V ++++ + + ++ + E G L S I
Sbjct: 70 QEVDHHWQASGGPHIVCILDVYENMHHG----KRCLLIIMECME----GGELFSRIQERG 121
Query: 65 HVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT---KTGILKLADFGLARAF 121
F+ E ++++ + + ++HS+ I HRD+K N+L T K +LKL DFG A+
Sbjct: 122 DQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181
Query: 122 SQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTE 181
+Q N T +Y PE+L Y D+W G IM + P NT
Sbjct: 182 TQ------NALQTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGFPPFYSNTG 234
Query: 182 QQQITLISQ--LCGSIT--PESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCD 237
Q + + G W +V E K
Sbjct: 235 QAISPGMKRRIRLGQYGFPNPEWS-------------------EVSEDAK---------Q 266
Query: 238 LLDKLLLLDPSKRFDSDAALNH 259
L+ LL DP++R +NH
Sbjct: 267 LIRLLLKTDPTERLTITQFMNH 288
Score = 33.5 bits (77), Expect = 0.11
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
L+ LL DP++R +NH
Sbjct: 266 QLIRLLLKTDPTERLTITQFMNH 288
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 119 bits (301), Expect = 4e-31
Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 54/256 (21%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNIHVKFS 69
RE+ IL+ ++H N++ L +I K + L+ + +G L + K S
Sbjct: 57 REVNILREIRHPNIITLHDIFENKTD--------VVLILELV----SGGELFDFLAEKES 104
Query: 70 LGE--IKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT----KTGILKLADFGLARAFSQ 123
L E + ++Q+L+G++Y+HS +I H D+K N+++ +KL DFG+A
Sbjct: 105 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 164
Query: 124 TKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQ 183
+ N T + PE++ + G D+W G I + + + G T+Q+
Sbjct: 165 GN-----EFKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGETKQE 218
Query: 184 QITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLL 243
+T IS + E + EL K D + +LL
Sbjct: 219 TLTNISAVNYDFDEEYFSNTS--------ELAK--------------------DFIRRLL 250
Query: 244 LLDPSKRFDSDAALNH 259
+ DP +R +L H
Sbjct: 251 VKDPKRRMTIAQSLEH 266
Score = 33.3 bits (77), Expect = 0.12
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
D + +LL+ DP +R +L H
Sbjct: 244 DFIRRLLVKDPKRRMTIAQSLEH 266
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 120 bits (303), Expect = 5e-31
Identities = 64/272 (23%), Positives = 109/272 (40%), Gaps = 54/272 (19%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNIHVKF 68
RE+ IL+ ++H NV+ L E+ K + L+ + AG L + K
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTD--------VILILELV----AGGELFDFLAEKE 109
Query: 69 SLGE--IKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT----KTGILKLADFGLARAFS 122
SL E + ++Q+LNG+YY+HS +I H D+K N+++ +K+ DFGLA
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 123 QTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQ 182
+ N T + PE++ + G D+W G I + + + G+T+Q
Sbjct: 170 FGN-----EFKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQ 223
Query: 183 QQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKL 242
+ + +S + E + L K D + +L
Sbjct: 224 ETLANVSAVNYEFEDEYFSNTS--------ALAK--------------------DFIRRL 255
Query: 243 LLLDPSKRFDSDAALNHDFFWTDPMPSDLSKM 274
L+ DP KR +L H + LS+
Sbjct: 256 LVKDPKKRMTIQDSLQHPWIKPKDTQQALSRK 287
Score = 33.0 bits (76), Expect = 0.15
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKM 379
D + +LL+ DP KR +L H + LS+
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRK 287
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 120 bits (304), Expect = 6e-31
Identities = 61/279 (21%), Positives = 111/279 (39%), Gaps = 56/279 (20%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNIHVKFS 69
RE+ IL+ + H N++ L ++ + + L+ + +G L + K S
Sbjct: 64 REVSILRQVLHPNIITLHDVYENRTD--------VVLILELV----SGGELFDFLAQKES 111
Query: 70 LGE--IKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT----KTGILKLADFGLARAFSQ 123
L E I+Q+L+G+ Y+H+ KI H D+K N+++ +KL DFGLA
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171
Query: 124 TKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQ 183
+ N T + PE++ + G D+W G I + + + G+T+Q+
Sbjct: 172 GV-----EFKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 184 QITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLL 243
+ I+ + E + EL K D + KLL
Sbjct: 226 TLANITAVSYDFDEEFFSQTS--------ELAK--------------------DFIRKLL 257
Query: 244 LLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSM 282
+ + KR AL H W P+ + + + + ++
Sbjct: 258 VKETRKRLTIQEALRHP--WITPVDTQQAMVRRESVVNL 294
Score = 34.6 bits (80), Expect = 0.057
Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSM 387
D + KLL+ + KR AL H W P+ + + + + ++
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHP--WITPVDTQQAMVRRESVVNL 294
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 120 bits (304), Expect = 9e-31
Identities = 51/256 (19%), Positives = 92/256 (35%), Gaps = 53/256 (20%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI---H 65
EI I+ L H +++L + K L+ +F G L I
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYE--------MVLILEFLS----GGELFDRIAAED 143
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT--KTGILKLADFGLARAFSQ 123
K S E+ ++Q GL ++H + I+H D+K N++ K +K+ DFGLA +
Sbjct: 144 YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203
Query: 124 TKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQ 183
+ T + PE++ + G D+W G + + + G + +
Sbjct: 204 DE-----IVKVTTATAEFAAPEIVDRE-PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE 257
Query: 184 QITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLL 243
+ + + +++ V P+A+ D + LL
Sbjct: 258 TLQNVKRCDWEFDEDAFSSVS----------PEAK------------------DFIKNLL 289
Query: 244 LLDPSKRFDSDAALNH 259
+P KR AL H
Sbjct: 290 QKEPRKRLTVHDALEH 305
Score = 33.9 bits (78), Expect = 0.089
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
D + LL +P KR AL H
Sbjct: 283 DFIKNLLQKEPRKRLTVHDALEH 305
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 123 bits (310), Expect = 1e-30
Identities = 52/252 (20%), Positives = 99/252 (39%), Gaps = 45/252 (17%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCE-HDLAGLLSNIHVKFS 69
+EI+ + +L+H +V+L + ++++F +L +++ H K S
Sbjct: 202 RKEIQTMSVLRHPTLVNLHDAFEDDNE--------MVMIYEFMSGGELFEKVADEHNKMS 253
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT--KTGILKLADFGLARAFSQTKNG 127
E + ++Q+ GL ++H N +H D+K N++ T ++ LKL DFGL +
Sbjct: 254 EDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ-- 311
Query: 128 QVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQITL 187
T + PE+ G + G D+W G + + + G + + +
Sbjct: 312 ---SVKVTTGTAEFAAPEVAEG-KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRN 367
Query: 188 ISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLLDP 247
+ ++ ++ G+ E K D + KLLL DP
Sbjct: 368 VKSCDWNMDDSAFSGIS--------EDGK--------------------DFIRKLLLADP 399
Query: 248 SKRFDSDAALNH 259
+ R AL H
Sbjct: 400 NTRMTIHQALEH 411
Score = 34.0 bits (78), Expect = 0.098
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
D + KLLL DP+ R AL H
Sbjct: 389 DFIRKLLLADPNTRMTIHQALEH 411
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 121 bits (306), Expect = 1e-30
Identities = 70/257 (27%), Positives = 105/257 (40%), Gaps = 56/257 (21%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI--HVK 67
RE +I +LLKH N+V L + + + YL+FD G L +I
Sbjct: 59 REARICRLLKHPNIVRLHDSISEEGH--------HYLIFDLVT----GGELFEDIVAREY 106
Query: 68 FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT---KTGILKLADFGLARAFSQT 124
+S + IQQ+L + + H ++HR++K N+L+ K +KLADFGLA
Sbjct: 107 YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG- 165
Query: 125 KNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQ 184
Q + T Y PE+L YG PVDLW G I+ + P + +
Sbjct: 166 -EQQA--WFGFAGTPGYLSPEVLRK-DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRL 221
Query: 185 ITLISQLCGSIT--PESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKL 242
I G+ W V P+A+ DL++K+
Sbjct: 222 YQQI--KAGAYDFPSPEWDTVT----------PEAK------------------DLINKM 251
Query: 243 LLLDPSKRFDSDAALNH 259
L ++PSKR + AL H
Sbjct: 252 LTINPSKRITAAEALKH 268
Score = 33.4 bits (77), Expect = 0.14
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
DL++K+L ++PSKR + AL H
Sbjct: 246 DLINKMLTINPSKRITAAEALKH 268
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 119 bits (300), Expect = 1e-30
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 13/174 (7%)
Query: 4 IFFPITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLS 62
+ + + E+ L +V L R + + E L L+
Sbjct: 91 VRLEVFRVEELVACAGLSSPRIVPLYGAVRE--------GPWVNIFMELLEGGSLGQLIK 142
Query: 63 NIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGIL-KLADFGLARAF 121
+ Q L GL Y+H+ +ILH D+KA NVL++ G L DFG A
Sbjct: 143 Q-MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCL 201
Query: 122 SQTKNGQVNRYTNRVV-TLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSP 174
G+ + + T + PE+++G + VD+W + C+M M
Sbjct: 202 QPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLHMLNGCH 254
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 118 bits (297), Expect = 2e-30
Identities = 60/266 (22%), Positives = 111/266 (41%), Gaps = 50/266 (18%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNI-HVKFSL 70
+EI++L+ L+H+NV+ L+++ + + Y+V ++C + +L ++ +F +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEE------KQKMYMVMEYCVCGMQEMLDSVPEKRFPV 108
Query: 71 GEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQVN 130
+ QL++GL Y+HS I+H+D+K N+L+T G LK++ G+A A
Sbjct: 109 CQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTC 168
Query: 131 RYT----NRVVTLWYRPPELLLGDRNY-GPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQI 185
R + ++PPE+ G + G VD+W AG + +
Sbjct: 169 RTSQGSPA------FQPPEIANGLDTFSGFKVDIWSAGVTLYNI---------------- 206
Query: 186 TLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLL 245
G P + G L+ + K + DLL +L
Sbjct: 207 -----TTGLY-P--FEGDNIYKLFENI-------GKGSYAIPGDCGPP-LSDLLKGMLEY 250
Query: 246 DPSKRFDSDAALNHDFFWTDPMPSDL 271
+P+KRF H +F P++
Sbjct: 251 EPAKRFSIRQIRQHSWFRKKHPPAEA 276
Score = 29.5 bits (67), Expect = 1.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDL 376
DLL +L +P+KRF H +F P++
Sbjct: 242 DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEA 276
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 118 bits (297), Expect = 2e-30
Identities = 62/257 (24%), Positives = 97/257 (37%), Gaps = 58/257 (22%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI--HVK 67
EI +L+ +KHEN+V L +I + + +YLV G L I
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTH--------YYLVMQLVS----GGELFDRILERGV 102
Query: 68 FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTG---ILKLADFGLARAFSQT 124
++ + VIQQ+L+ + Y+H N I+HRD+K N+L + + DFGL++
Sbjct: 103 YTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN- 161
Query: 125 KNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQ 184
+ T Y PE+L + Y VD W G I + P TE +
Sbjct: 162 -----GIMSTACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVITYILLCGYPPFYEETESKL 215
Query: 185 ITLISQLCGSIT--PESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKL 242
I G W + A+ D + L
Sbjct: 216 FEKI--KEGYYEFESPFWDDIS----------ESAK------------------DFICHL 245
Query: 243 LLLDPSKRFDSDAALNH 259
L DP++R+ + AL+H
Sbjct: 246 LEKDPNERYTCEKALSH 262
Score = 34.5 bits (80), Expect = 0.047
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
D + LL DP++R+ + AL+H
Sbjct: 240 DFICHLLEKDPNERYTCEKALSH 262
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 117 bits (295), Expect = 3e-30
Identities = 44/208 (21%), Positives = 77/208 (37%), Gaps = 56/208 (26%)
Query: 10 ALREIKIL-QLLKHENVVHLIEICRTKANQYNRYRSTF------YLVFDFCEH-DLAGLL 61
ALRE+ L +H +VV RY S + + ++C LA +
Sbjct: 57 ALREVYAHAVLGQHSHVV--------------RYFSAWAEDDHMLIQNEYCNGGSLADAI 102
Query: 62 SNIHVK---FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGIL-------- 110
S + F E+K ++ Q+ GL YIHS ++H D+K +N+ I++T I
Sbjct: 103 SENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGD 162
Query: 111 -----------KLADFGLARAFS--QTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPV 157
K+ D G S Q + G + E+L + + P
Sbjct: 163 EDDWASNKVMFKIGDLGHVTRISSPQVEEG----------DSRFLANEVLQENYTHLPKA 212
Query: 158 DLWGAGCIMAEMWTRSPIMQGNTEQQQI 185
D++ + P+ + + +I
Sbjct: 213 DIFALALTVVCAAGAEPLPRNGDQWHEI 240
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 118 bits (297), Expect = 6e-30
Identities = 60/264 (22%), Positives = 103/264 (39%), Gaps = 61/264 (23%)
Query: 12 REIKILQLLK-HENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI--HV 66
RE IL+ + H +++ LI+ + + +LVFD L + V
Sbjct: 148 RETHILRQVAGHPHIITLIDSYESSSF--------MFLVFDLMR----KGELFDYLTEKV 195
Query: 67 KFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKN 126
S E + +++ LL + ++H+N I+HRD+K N+L+ ++L+DFG + +
Sbjct: 196 ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE- 254
Query: 127 GQVNRYTNRVVTLWYRPPELLLGD-----RNYGPPVDLWGAGCIMAEMWTRSPIMQGNTE 181
+ T Y PE+L YG VDLW G I+ +
Sbjct: 255 ----KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF-------TL----- 298
Query: 182 QQQITLISQLCGSITP---ESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDL 238
L GS P + + + + + + +K DL
Sbjct: 299 ---------LAGS-PPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVK---------DL 339
Query: 239 LDKLLLLDPSKRFDSDAALNHDFF 262
+ +LL +DP R ++ AL H FF
Sbjct: 340 ISRLLQVDPEARLTAEQALQHPFF 363
Score = 34.3 bits (79), Expect = 0.071
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF 367
DL+ +LL +DP R ++ AL H FF
Sbjct: 338 DLISRLLQVDPEARLTAEQALQHPFF 363
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 117 bits (294), Expect = 8e-30
Identities = 62/263 (23%), Positives = 97/263 (36%), Gaps = 60/263 (22%)
Query: 12 REIKILQLLK-HENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNIHVK- 67
+EI L+L + H N+V L E+ + + +LV + G L I K
Sbjct: 54 KEITALKLCEGHPNIVKLHEVFHDQLH--------TFLVMELLN----GGELFERIKKKK 101
Query: 68 -FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT---KTGILKLADFGLARAFSQ 123
FS E ++++L++ + ++H ++HRD+K N+L T +K+ DFG AR
Sbjct: 102 HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP 161
Query: 124 TKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQ 183
TL Y PELL Y DLW G I+ M + Q +
Sbjct: 162 DN----QPLKTPCFTLHYAAPELLNQ-NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSL 216
Query: 184 QITLISQLCGSI-------TPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGC 236
T ++ I E+W V + K
Sbjct: 217 TCTSAVEIMKKIKKGDFSFEGEAWKNVS--------QEAK-------------------- 248
Query: 237 DLLDKLLLLDPSKRFDSDAALNH 259
DL+ LL +DP+KR +
Sbjct: 249 DLIQGLLTVDPNKRLKMSGLRYN 271
Score = 33.0 bits (76), Expect = 0.14
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
DL+ LL +DP+KR +
Sbjct: 249 DLIQGLLTVDPNKRLKMSGLRYN 271
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 116 bits (292), Expect = 2e-29
Identities = 67/257 (26%), Positives = 95/257 (36%), Gaps = 56/257 (21%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI--HVK 67
EI +L L H N++ L EI T LV + G L I
Sbjct: 97 TEIGVLLRLSHPNIIKLKEIFETPTE--------ISLVLELVT----GGELFDRIVEKGY 144
Query: 68 FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT---KTGILKLADFGLARAFSQT 124
+S + ++Q+L + Y+H N I+HRD+K N+L LK+ADFGL++
Sbjct: 145 YSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--- 201
Query: 125 KNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQ 184
++ + T Y PE+L G YGP VD+W G I + Q
Sbjct: 202 EHQVL--MKTVCGTPGYCAPEILRG-CAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF 258
Query: 185 ITLISQLCGSIT--PESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKL 242
+ L W V A KD L+ KL
Sbjct: 259 M-FRRILNCEYYFISPWWDEVS----------LNA-------------KD-----LVRKL 289
Query: 243 LLLDPSKRFDSDAALNH 259
++LDP KR + AL H
Sbjct: 290 IVLDPKKRLTTFQALQH 306
Score = 34.2 bits (79), Expect = 0.079
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
DL+ KL++LDP KR + AL H
Sbjct: 284 DLVRKLIVLDPKKRLTTFQALQH 306
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 114 bits (288), Expect = 3e-29
Identities = 62/253 (24%), Positives = 102/253 (40%), Gaps = 51/253 (20%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFSL 70
REI+I L+H N++ + + YL+ +F +L L +F
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKR--------IYLMLEFAPRGELYKELQKHG-RFDE 113
Query: 71 GEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQVN 130
+++L + L+Y H K++HRD+K N+L+ G LK+ADFG + +
Sbjct: 114 QRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR----- 168
Query: 131 RYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQITLISQ 190
R T TL Y PPE++ G + + VDLW AG + E
Sbjct: 169 RRT-MCGTLDYLPPEMIEG-KTHDEKVDLWCAGVLCYEF--------------------- 205
Query: 191 LCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGC-DLLDKLLLLDPSK 249
L G P + + + ++ V + P++ D G DL+ KLL P +
Sbjct: 206 LVGM-PP--FDSPSHTETHRRI-------VNVDLKFPPFLSD--GSKDLISKLLRYHPPQ 253
Query: 250 RFDSDAALNHDFF 262
R + H +
Sbjct: 254 RLPLKGVMEHPWV 266
Score = 32.6 bits (75), Expect = 0.23
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF 367
DL+ KLL P +R + H +
Sbjct: 241 DLISKLLRYHPPQRLPLKGVMEHPWV 266
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 116 bits (292), Expect = 3e-29
Identities = 31/278 (11%), Positives = 78/278 (28%), Gaps = 60/278 (21%)
Query: 1 MLGIFFPITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGL 60
+ GI A ++ + ++ R + ++ + + + + ++ + +L
Sbjct: 130 LRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTF 189
Query: 61 LSNI------HVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLAD 114
+ H ++ Q++ L +H ++H ++ ++++ + G + L
Sbjct: 190 GEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTG 249
Query: 115 FGLARAFSQTKNGQVNRYTNRVVTLWYRPPELL----------LGDRNYGPPVDLWGAGC 164
F + V+ + PPEL D W G
Sbjct: 250 FEHLV--------RDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301
Query: 165 IMAEMWTRSPIMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKE 224
++ +W + + I + C +I
Sbjct: 302 VIYWIWCADLPITKDAALGGSEWIFRSCKNIPQP-------------------------- 335
Query: 225 RLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFF 262
V+ LL+ L R A+ +
Sbjct: 336 -----VRA-----LLEGFLRYPKEDRLLPLQAMETPEY 363
Score = 34.6 bits (79), Expect = 0.060
Identities = 5/26 (19%), Positives = 8/26 (30%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF 367
LL+ L R A+ +
Sbjct: 338 ALLEGFLRYPKEDRLLPLQAMETPEY 363
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 114 bits (288), Expect = 5e-29
Identities = 61/274 (22%), Positives = 102/274 (37%), Gaps = 62/274 (22%)
Query: 12 REIKILQLLK-HENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNIHVK- 67
RE+++L + H NV+ LIE + FYLVF+ G +LS+IH +
Sbjct: 59 REVEMLYQCQGHRNVLELIEFFEEEDR--------FYLVFEKMR----GGSILSHIHKRR 106
Query: 68 -FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT---KTGILKLADFGLARAF-- 121
F+ E V+Q + + L ++H+ I HRD+K N+L + +K+ DF L
Sbjct: 107 HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166
Query: 122 -SQTKNGQVNRYTNRVVTLWYRPPELLLG----DRNYGPPVDLWGAGCIMAEMWTRSPIM 176
+ Y PE++ Y DLW G I+ I+
Sbjct: 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILY-------IL 219
Query: 177 QGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLK--------- 227
L G P + +++ E A + + E ++
Sbjct: 220 --------------LSGY--PPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDK 263
Query: 228 --PYVKDQYGCDLLDKLLLLDPSKRFDSDAALNH 259
++ DL+ KLL+ D +R + L H
Sbjct: 264 DWAHISCA-AKDLISKLLVRDAKQRLSAAQVLQH 296
Score = 33.0 bits (76), Expect = 0.17
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
DL+ KLL+ D +R + L H
Sbjct: 274 DLISKLLVRDAKQRLSAAQVLQH 296
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 113 bits (286), Expect = 5e-29
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 58/261 (22%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNI---HVKF 68
E ++L+ L+H N+V + + + LV + +G L
Sbjct: 74 EEAEMLKGLQHPNIVRFYDSWESTVKG----KKCIVLVTELMT---SGTLKTYLKRFKVM 126
Query: 69 SLGEIKKVIQQLLNGLYYIHSNK--ILHRDMKAANVLIT-KTGILKLADFGLARAFSQTK 125
+ ++ +Q+L GL ++H+ I+HRD+K N+ IT TG +K+ D GLA +
Sbjct: 127 KIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 186
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQI 185
V + T + PE + + Y VD++ G M EM T
Sbjct: 187 AKAV------IGTPEFMAPE--MYEEKYDESVDVYAFGMCMLEMATSEY----------- 227
Query: 186 TLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPY----VKDQYGCDLLDK 241
P Y++ + R+V +KP V ++++
Sbjct: 228 -----------P-----------YSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEG 265
Query: 242 LLLLDPSKRFDSDAALNHDFF 262
+ + +R+ LNH FF
Sbjct: 266 CIRQNKDERYSIKDLLNHAFF 286
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 115 bits (291), Expect = 7e-29
Identities = 63/264 (23%), Positives = 105/264 (39%), Gaps = 60/264 (22%)
Query: 12 REIKIL-QLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI---- 64
RE+++ + + ++V ++++ R +V + + G L S I
Sbjct: 103 REVELHWRASQCPHIVRIVDVYENLYAG----RKCLLIVMECLD----GGELFSRIQDRG 154
Query: 65 HVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTG---ILKLADFGLARAF 121
F+ E ++++ + + Y+HS I HRD+K N+L T ILKL DFG A+
Sbjct: 155 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 214
Query: 122 SQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTE 181
+ N T T +Y PE +LG Y D+W G IM I+
Sbjct: 215 TSH-----NSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMY-------IL----- 256
Query: 182 QQQITLISQLCG------SITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYG 235
LCG + PG++T + E P + +V E +K
Sbjct: 257 ---------LCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK-------- 299
Query: 236 CDLLDKLLLLDPSKRFDSDAALNH 259
L+ LL +P++R +NH
Sbjct: 300 -MLIRNLLKTEPTQRMTITEFMNH 322
Score = 32.4 bits (74), Expect = 0.30
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
L+ LL +P++R +NH
Sbjct: 300 MLIRNLLKTEPTQRMTITEFMNH 322
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 113 bits (285), Expect = 9e-29
Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 57/260 (21%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNI--HVKFS 69
+EI IL+ L H NVV L+E+ Y+VF+ G + + S
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPN------EDHLYMVFELVNQ---GPVMEVPTLKPLS 135
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
+ + Q L+ G+ Y+H KI+HRD+K +N+L+ + G +K+ADFG++ F G
Sbjct: 136 EDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK----GSD 191
Query: 130 NRYTNRVVTLWYRPPELLLGD-RNY-GPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQITL 187
+N V T + PE L + + G +D+W G +
Sbjct: 192 ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCF------------------ 233
Query: 188 ISQLCGSITPESWPGVETLDLYNKM-----ELPKAQKRKVKERLKPYVKDQYGCDLLDKL 242
+ G P + + L++K+ E P + + +K DL+ ++
Sbjct: 234 ---VFGQC-P--FMDERIMCLHSKIKSQALEFPD------QPDIAEDLK-----DLITRM 276
Query: 243 LLLDPSKRFDSDAALNHDFF 262
L +P R H +
Sbjct: 277 LDKNPESRIVVPEIKLHPWV 296
Score = 27.2 bits (61), Expect = 10.0
Identities = 6/26 (23%), Positives = 11/26 (42%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF 367
DL+ ++L +P R H +
Sbjct: 271 DLITRMLDKNPESRIVVPEIKLHPWV 296
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 114 bits (287), Expect = 2e-28
Identities = 55/278 (19%), Positives = 102/278 (36%), Gaps = 53/278 (19%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI---H 65
EI ++ L H N++ L + +K + LV ++ + G L I
Sbjct: 134 KNEISVMNQLDHANLIQLYDAFESKND--------IVLVMEYVD----GGELFDRIIDES 181
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT--KTGILKLADFGLARAFSQ 123
+ + ++Q+ G+ ++H ILH D+K N+L +K+ DFGLAR +
Sbjct: 182 YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241
Query: 124 TKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQ 183
+ + T + PE++ D P D+W G I + + G+ + +
Sbjct: 242 RE-----KLKVNFGTPEFLAPEVVNYDF-VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE 295
Query: 184 QITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLL 243
+ I + E + + E K + + KLL
Sbjct: 296 TLNNILACRWDLEDEEFQDIS--------EEAK--------------------EFISKLL 327
Query: 244 LLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQS 281
+ + S R + AL H + + S LS ++ S
Sbjct: 328 IKEKSWRISASEALKHPWLSDHKLHSRLSAQKKKNRGS 365
Score = 35.1 bits (81), Expect = 0.041
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQS 386
+ + KLL+ + S R + AL H + + S LS ++ S
Sbjct: 321 EFISKLLIKEKSWRISASEALKHPWLSDHKLHSRLSAQKKKNRGS 365
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 111 bits (281), Expect = 6e-28
Identities = 60/257 (23%), Positives = 104/257 (40%), Gaps = 52/257 (20%)
Query: 11 LREIKILQLLKH-ENVVHLIEICRTKANQYNRYRSTFYLVFDFCE----HDLAGLLSNIH 65
L EI +L+L K V++L E+ + L+ ++ L L +
Sbjct: 76 LHEIAVLELAKSCPRVINLHEVYENTSE--------IILILEYAAGGEIFSL--CLPELA 125
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLI---TKTGILKLADFGLARAFS 122
S ++ ++I+Q+L G+YY+H N I+H D+K N+L+ G +K+ DFG++R
Sbjct: 126 EMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI- 184
Query: 123 QTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQ 182
+ + T Y PE+L D D+W G I + T + G Q
Sbjct: 185 --GHACE--LREIMGTPEYLAPEILNYDP-ITTATDMWNIGIIAYMLLTHTSPFVGEDNQ 239
Query: 183 QQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKL 242
+ ISQ+ + E++ V +L D + L
Sbjct: 240 ETYLNISQVNVDYSEETFSSVS--------QLAT--------------------DFIQSL 271
Query: 243 LLLDPSKRFDSDAALNH 259
L+ +P KR ++ L+H
Sbjct: 272 LVKNPEKRPTAEICLSH 288
Score = 32.6 bits (75), Expect = 0.22
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
D + LL+ +P KR ++ L+H
Sbjct: 266 DFIQSLLVKNPEKRPTAEICLSH 288
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 111 bits (281), Expect = 8e-28
Identities = 53/260 (20%), Positives = 100/260 (38%), Gaps = 57/260 (21%)
Query: 12 REIKIL-QLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNIHVK- 67
EI+IL + +H N++ L ++ Y+V + + G LL I +
Sbjct: 64 EEIEILLRYGQHPNIITLKDVYDDGKY--------VYVVTELMK----GGELLDKILRQK 111
Query: 68 -FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVL-ITKTG---ILKLADFGLARAFS 122
FS E V+ + + Y+H+ ++HRD+K +N+L + ++G +++ DFG A+
Sbjct: 112 FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL- 170
Query: 123 QTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQ 182
+ T + PE+L + Y D+W G ++ M T +
Sbjct: 171 ---RAENGLLMTPCYTANFVAPEVLER-QGYDAACDIWSLGVLLYTMLTGYTPFANGPDD 226
Query: 183 QQITLISQ-LCGSI--TPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLL 239
++++ G + W V + K DL+
Sbjct: 227 TPEEILARIGSGKFSLSGGYWNSVS--------DTAK--------------------DLV 258
Query: 240 DKLLLLDPSKRFDSDAALNH 259
K+L +DP +R + L H
Sbjct: 259 SKMLHVDPHQRLTAALVLRH 278
Score = 33.8 bits (78), Expect = 0.10
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
DL+ K+L +DP +R + L H
Sbjct: 256 DLVSKMLHVDPHQRLTAALVLRH 278
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 111 bits (280), Expect = 9e-28
Identities = 61/326 (18%), Positives = 105/326 (32%), Gaps = 102/326 (31%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLV----------FDFCEHDLAGLL 61
EI IL ++H N++ +++I + F LV F F +
Sbjct: 78 LEIAILSRVEHANIIKVLDIFENQ--------GFFQLVMEKHGSGLDLFAFIDR------ 123
Query: 62 SNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAF 121
H + + +QL++ + Y+ I+HRD+K N++I + +KL DFG A
Sbjct: 124 ---HPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180
Query: 122 SQ-----TKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIM 176
+ T G + Y PE+L+G+ GP +++W G
Sbjct: 181 ERGKLFYTFCGTIE----------YCAPEVLMGNPYRGPELEMWSLG------------- 217
Query: 177 QGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKE---RLKPYVKDQ 233
+TL + + E P + + E V +
Sbjct: 218 --------VTLYTLVFE-------------------ENPFCELEETVEAAIHPPYLVSKE 250
Query: 234 YGCDLLDKLLLLDPSKRFDSDAALNHDFF----------------WTDPMPSDLSKMLAQ 277
L+ LL P +R + + + P LS +
Sbjct: 251 -LMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPESGVLSAASLE 309
Query: 278 HTQSMFEYLAPPRRPGHMRAHHHHHH 303
+A + HHHHHH
Sbjct: 310 MGNRSLSDVAQAQELCGGEGHHHHHH 335
Score = 32.4 bits (74), Expect = 0.29
Identities = 15/83 (18%), Positives = 23/83 (27%), Gaps = 16/83 (19%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF----------------WTDPMPSDLSKMLAQHTQ 385
L+ LL P +R + + + P LS +
Sbjct: 253 SLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPESGVLSAASLEMGN 312
Query: 386 SMFEYLAPPRRPGHMRAHHHHHH 408
+A + HHHHHH
Sbjct: 313 RSLSDVAQAQELCGGEGHHHHHH 335
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 109 bits (275), Expect = 4e-27
Identities = 77/317 (24%), Positives = 118/317 (37%), Gaps = 72/317 (22%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG-LLSNI--HVKF 68
+EI I ++L HENVV R + YL ++C G L I +
Sbjct: 54 KEICINKMLNHENVVKFYGHRREG--------NIQYLFLEYCSG---GELFDRIEPDIGM 102
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
+ ++ QL+ G+ Y+H I HRD+K N+L+ + LK++DFGLA F
Sbjct: 103 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY---NN 159
Query: 129 VNRYTNRVV-TLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQITL 187
R N++ TL Y PELL + PVD+W G ++ M
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM------------------ 201
Query: 188 ISQLCGSITPESWP---GVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGC-DLLDKLL 243
L G + P ++ Y+ ++ K L P+ K LL K+L
Sbjct: 202 ---LAGEL-----PWDQPSDSCQEYSD-------WKEKKTYLNPWKKIDSAPLALLHKIL 246
Query: 244 LLDPSKRFDSDAALNHDFF----------------WTDPMPSDLSKMLAQHTQSM-FEYL 286
+ +PS R ++ PS SK + +
Sbjct: 247 VENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDFSPVNSA 306
Query: 287 APPRRPGHMRAHHHHHH 303
+ G + HHHHHH
Sbjct: 307 SRTPGSGWSKEHHHHHH 323
Score = 33.1 bits (76), Expect = 0.16
Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 17/84 (20%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF----------------WTDPMPSDLSKMLAQHTQ 385
LL K+L+ +PS R ++ PS SK + +
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLD 299
Query: 386 SM-FEYLAPPRRPGHMRAHHHHHH 408
+ G + HHHHHH
Sbjct: 300 FSPVNSASRTPGSGWSKEHHHHHH 323
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 109 bits (274), Expect = 4e-27
Identities = 53/278 (19%), Positives = 92/278 (33%), Gaps = 80/278 (28%)
Query: 12 REIKILQLLKHE--NVVHLIEICRTKANQYNRYRSTFYLV----------FDFCEHDLAG 59
E+ +L+ + V+ L++ +F L+ FDF
Sbjct: 95 MEVVLLKKVSSGFSGVIRLLDWFERP--------DSFVLILERPEPVQDLFDFITE---- 142
Query: 60 LLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLI-TKTGILKLADFGLA 118
+ Q+L + + H+ +LHRD+K N+LI G LKL DFG
Sbjct: 143 -----RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 197
Query: 119 RAFSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQG 178
+ K+ YT+ T Y PPE + R +G +W G ++ +M
Sbjct: 198 ---ALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM--------- 242
Query: 179 NTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKE---RLKPYVKDQYG 235
+CG +P ++ + V +
Sbjct: 243 ------------VCGD-------------------IPFEHDEEIIRGQVFFRQRVSSE-C 270
Query: 236 CDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSK 273
L+ L L PS R + NH + +P + ++
Sbjct: 271 QHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 308
Score = 30.8 bits (70), Expect = 0.87
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 341 CDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSK 378
L+ L L PS R + NH + +P + ++
Sbjct: 271 QHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 308
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 110 bits (276), Expect = 6e-27
Identities = 58/344 (16%), Positives = 103/344 (29%), Gaps = 64/344 (18%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTF------YLVFDFCEHDLAGLLSNI 64
E+ + +L H N+V YR+TF ++V F G ++
Sbjct: 74 QGELHVSKLFNHPNIV--------------PYRATFIADNELWVVTSFMA---YGSAKDL 116
Query: 65 ---HVKFSLGE--IKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLAR 119
H + E I ++Q +L L YIH +HR +KA+++LI+ G + L+
Sbjct: 117 ICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNL 176
Query: 120 AFSQT---KNGQVNRYTNRVVTLWYRPPELLL-GDRNYGPPVDLWGAGCIMA-EMWTRSP 174
+ + + V L + PE+L + Y D++ G I A E+
Sbjct: 177 SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG-ITACELANGHV 235
Query: 175 -------------IMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRK 221
+ G + S + S + +
Sbjct: 236 PFKDMPATQMLLEKLNGTVP--CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPS 293
Query: 222 VKERLKPYVKDQYGC---DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQH 278
+ + +++ L +P R + LNH FF K + +
Sbjct: 294 NGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF----------KQIKRR 343
Query: 279 TQSMFEYLAPPRRPGHMRAHHHHHHAGAPGAAGPAAGRATTETG 322
L P P + G G E
Sbjct: 344 ASEALPELLRPVTP--ITNFEGSQSQDHSGIFGLVTNLEELEVD 385
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 110 bits (275), Expect = 9e-27
Identities = 35/323 (10%), Positives = 85/323 (26%), Gaps = 62/323 (19%)
Query: 7 PITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNI-- 64
A ++ + ++ R + ++ + + + + ++ + +L +
Sbjct: 141 QKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLS 200
Query: 65 ----HVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARA 120
H ++ Q++ L +H ++H ++ ++++ + G + L F
Sbjct: 201 HSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVR 260
Query: 121 FSQTKNGQVNRYTNRVVTLWYRPPELLLGDR----NYGPPVDLWGAGCIMAEMWTRSPIM 176
+ V+ +L + D W G + +W
Sbjct: 261 DGAS---AVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPN 317
Query: 177 QGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGC 236
+ I + C +I
Sbjct: 318 TDDAALGGSEWIFRSCKNIPQPVR------------------------------------ 341
Query: 237 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSMFEYLAPPRRPGHMR 296
LL+ L R A+ + + + ++LS L + P R G
Sbjct: 342 ALLEGFLRYPKEDRLLPLQAMETPEY--EQLRTELSAALPLYQTD-----GEPTREGGAP 394
Query: 297 AHHHHHHAGAPGAAGPAAGRATT 319
+G A A T
Sbjct: 395 P------SGTSQPDEAGAAEAVT 411
Score = 34.6 bits (79), Expect = 0.051
Identities = 15/83 (18%), Positives = 24/83 (28%), Gaps = 13/83 (15%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSMFEYLAPPRRPGHMR 401
LL+ L R A+ + + + ++LS L + P R G
Sbjct: 342 ALLEGFLRYPKEDRLLPLQAMETPEY--EQLRTELSAALPLYQTD-----GEPTREGGAP 394
Query: 402 AHHHHHHAGAPGAAGPAAGRATT 424
+G A A T
Sbjct: 395 P------SGTSQPDEAGAAEAVT 411
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 108 bits (272), Expect = 1e-26
Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 65/283 (22%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFSL 70
RE++I+++L H N+V L E+ T+ T YL+ ++ ++ L H +
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETE--------KTLYLIMEYASGGEVFDYLVA-HGRMKE 113
Query: 71 GEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQ-----TK 125
E + +Q+++ + Y H +I+HRD+KA N+L+ +K+ADFG + F+
Sbjct: 114 KEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF 173
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQI 185
G Y PEL G + GP VD+W G I+ +
Sbjct: 174 CG----------APPYAAPELFQGKKYDGPEVDVWSLGVILYTL---------------- 207
Query: 186 TLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKE---RLKPYVKDQYGC-DLLDK 241
+ GS+ P D N EL + +V R+ Y+ C +LL +
Sbjct: 208 -----VSGSL-P--------FDGQNLKEL----RERVLRGKYRIPFYMST--DCENLLKR 247
Query: 242 LLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSMFE 284
L+L+P KR + + + +L + +
Sbjct: 248 FLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQ 290
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 107 bits (270), Expect = 1e-26
Identities = 36/165 (21%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
E+ +L+ +H N++ + T +V +CE L L KF
Sbjct: 68 KNEVGVLRKTRHVNILLFMGYS-TAPQ--------LAIVTQWCEGSSLYHHLHASETKFE 118
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
+ ++ + +Q G+ Y+H+ I+HRD+K+ N+ + + +K+ DFGLA S+
Sbjct: 119 MKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS-- 176
Query: 130 NRYTNRVVTLWYRPPELLLGDRN--YGPPVDLWGAGCIMAEMWTR 172
+++ ++ + PE++ + Y D++ G ++ E+ T
Sbjct: 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 221
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 107 bits (268), Expect = 2e-26
Identities = 44/187 (23%), Positives = 74/187 (39%), Gaps = 20/187 (10%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFSL 70
E+ +L+HEN++ I T + + +L+ + E L L
Sbjct: 51 TELYNTVMLRHENILGFIASDMTSRHSSTQL----WLITHYHEMGSLYDYLQL--TTLDT 104
Query: 71 GEIKKVIQQLLNGLYYIHS--------NKILHRDMKAANVLITKTGILKLADFGLARAFS 122
+++ + +GL ++H I HRD+K+ N+L+ K G +AD GLA S
Sbjct: 105 VSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS 164
Query: 123 QTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPP-----VDLWGAGCIMAEMWTRSPIMQ 177
Q+ N RV T Y PE+L VD+W G ++ E+ R
Sbjct: 165 QSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNG 224
Query: 178 GNTEQQQ 184
+ +
Sbjct: 225 IVEDYKP 231
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 107 bits (270), Expect = 3e-26
Identities = 66/277 (23%), Positives = 110/277 (39%), Gaps = 50/277 (18%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHVKFSLG 71
+E++ LQ L+H N + Y R T +LV ++C + LL
Sbjct: 103 KEVRFLQKLRHPNTIQYRG-------CYLR-EHTAWLVMEYCLGSASDLLEVHKKPLQEV 154
Query: 72 EIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQVNR 131
EI V L GL Y+HS+ ++HRD+KA N+L+++ G++KL DFG A +
Sbjct: 155 EIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSA--------SIMAP 206
Query: 132 YTNRVVTLWYRPPELLLGDRN--YGPPVDLWGAGCIMA-EMWTRSPIMQGNTEQQQITLI 188
+ V T ++ PE++L Y VD+W G I E+ R P + + I
Sbjct: 207 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHI 265
Query: 189 SQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLLDPS 248
+ + E P Q E + + +D L P
Sbjct: 266 A---------------------QNESPALQSGHWSEYFR---------NFVDSCLQKIPQ 295
Query: 249 KRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSMFEY 285
R S+ L H F + P+ + ++ + ++ E
Sbjct: 296 DRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVREL 332
Score = 28.2 bits (63), Expect = 6.1
Identities = 10/49 (20%), Positives = 21/49 (42%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSMFEY 390
+ +D L P R S+ L H F + P+ + ++ + ++ E
Sbjct: 284 NFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVREL 332
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 106 bits (266), Expect = 4e-26
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 20/186 (10%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFSL 70
EI +L+HEN++ I + + +LV D+ EH L L+ ++
Sbjct: 46 AEIYQTVMLRHENILGFIAADNKDNGTWTQL----WLVSDYHEHGSLFDYLN--RYTVTV 99
Query: 71 GEIKKVIQQLLNGLYYIHSN--------KILHRDMKAANVLITKTGILKLADFGLARAFS 122
+ K+ +GL ++H I HRD+K+ N+L+ K G +AD GLA
Sbjct: 100 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159
Query: 123 QTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPP-----VDLWGAGCIMAEMWTRSPIMQ 177
+ +RV T Y PE+L N D++ G + E+ R I
Sbjct: 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 219
Query: 178 GNTEQQ 183
+ + Q
Sbjct: 220 IHEDYQ 225
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 105 bits (265), Expect = 5e-26
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 53/273 (19%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRY--RSTFYLVFDFCEHDLAGLLSNI--HV 66
+ EI +++ K+ N+V N + Y ++V ++ G L+++
Sbjct: 65 INEILVMRENKNPNIV----------NYLDSYLVGDELWVVMEYLA---GGSLTDVVTET 111
Query: 67 KFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKN 126
G+I V ++ L L ++HSN+++HRD+K+ N+L+ G +KL DFG +Q
Sbjct: 112 CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC---AQITP 168
Query: 127 GQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMA-EMWTRSPIMQGNTEQQQI 185
Q R T V T ++ PE++ + YGP VD+W G IMA EM P + +
Sbjct: 169 EQSKRST-MVGTPYWMAPEVVT-RKAYGPKVDIWSLG-IMAIEMIEGEPPYLNENPLRAL 225
Query: 186 TLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLL 245
LI+ P+ Q E+L + D L++ L +
Sbjct: 226 YLIA---------------------TNGTPELQN---PEKLSAIFR-----DFLNRCLEM 256
Query: 246 DPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQH 278
D KR + L H F S L+ ++A
Sbjct: 257 DVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAA 289
Score = 29.2 bits (66), Expect = 2.9
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQH 383
D L++ L +D KR + L H F S L+ ++A
Sbjct: 248 DFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAA 289
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 105 bits (264), Expect = 6e-26
Identities = 64/258 (24%), Positives = 101/258 (39%), Gaps = 53/258 (20%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG-LLSNI--HVKF 68
+EI I ++L HENVV R + YL ++C G L I +
Sbjct: 54 KEICINKMLNHENVVKFYGHRREG--------NIQYLFLEYCSG---GELFDRIEPDIGM 102
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
+ ++ QL+ G+ Y+H I HRD+K N+L+ + LK++DFGLA F +
Sbjct: 103 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 129 VNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQITLI 188
+ TL Y PELL + PVD+W G ++ M
Sbjct: 163 LLNKM--CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM------------------- 201
Query: 189 SQLCGSITPESWP---GVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGC-DLLDKLLL 244
L G + P ++ Y+ ++ K L P+ K LL K+L+
Sbjct: 202 --LAGEL-----PWDQPSDSCQEYSD-------WKEKKTYLNPWKKIDSAPLALLHKILV 247
Query: 245 LDPSKRFDSDAALNHDFF 262
+PS R ++
Sbjct: 248 ENPSARITIPDIKKDRWY 265
Score = 27.5 bits (62), Expect = 8.9
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF 367
LL K+L+ +PS R ++
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWY 265
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 106 bits (266), Expect = 6e-26
Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 20/187 (10%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFSL 70
EI L++HEN++ I + + YL+ D+ E+ L L +
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKGTGSWTQL----YLITDYHENGSLYDYLKST--TLDA 133
Query: 71 GEIKKVIQQLLNGLYYIHS--------NKILHRDMKAANVLITKTGILKLADFGLARAFS 122
+ K+ ++GL ++H+ I HRD+K+ N+L+ K G +AD GLA F
Sbjct: 134 KSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFI 193
Query: 123 QTKNGQVNRYTNRVVTLWYRPPELLLGDRN-----YGPPVDLWGAGCIMAEMWTRSPIMQ 177
N RV T Y PPE+L N D++ G I+ E+ R
Sbjct: 194 SDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGG 253
Query: 178 GNTEQQQ 184
E Q
Sbjct: 254 IVEEYQL 260
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 105 bits (265), Expect = 7e-26
Identities = 52/269 (19%), Positives = 91/269 (33%), Gaps = 82/269 (30%)
Query: 12 REIKILQLL----KHENVVHLIEICRTKANQYNRYRSTFYLV----------FDFCEHDL 57
E+ +L + H V+ L++ T+ F LV FD+
Sbjct: 83 LEVALLWKVGAGGGHPGVIRLLDWFETQ--------EGFMLVLERPLPAQDLFDYITE-- 132
Query: 58 AGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLI-TKTGILKLADFG 116
G + Q++ + + HS ++HRD+K N+LI + G KL DFG
Sbjct: 133 -------KGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG 185
Query: 117 LARAFSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIM 176
A + YT+ T Y PPE + + + P +W G ++ +M
Sbjct: 186 SG-AL--LHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDM------- 232
Query: 177 QGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKE---RLKPYVKDQ 233
+CG ++P + +++ E +V
Sbjct: 233 --------------VCG-------------------DIPFERDQEILEAELHFPAHVSPD 259
Query: 234 YGCDLLDKLLLLDPSKRFDSDAALNHDFF 262
C L+ + L PS R + L +
Sbjct: 260 -CCALIRRCLAPKPSSRPSLEEILLDPWM 287
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 104 bits (262), Expect = 9e-26
Identities = 59/259 (22%), Positives = 108/259 (41%), Gaps = 62/259 (23%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHVKFSLG 71
REI L+LL+H +++ L ++ ++K +V ++ ++L + K S
Sbjct: 62 REISYLRLLRHPHIIKLYDVIKSK--------DEIIMVIEYAGNELFDYIVQ-RDKMSEQ 112
Query: 72 EIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQ-----TKN 126
E ++ QQ+++ + Y H +KI+HRD+K N+L+ + +K+ADFGL+ + T
Sbjct: 113 EARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 172
Query: 127 GQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQIT 186
G N Y PE++ G GP VD+W G I+ M
Sbjct: 173 GSPN----------YAAPEVISGKLYAGPEVDVWSCGVILYVM----------------- 205
Query: 187 LISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKE---RLKPYVKDQYGCDLLDKLL 243
LC + P D + L + + L ++ L+ ++L
Sbjct: 206 ----LCRRL-P--------FDDESIPVL----FKNISNGVYTLPKFLSPG-AAGLIKRML 247
Query: 244 LLDPSKRFDSDAALNHDFF 262
+++P R + D+F
Sbjct: 248 IVNPLNRISIHEIMQDDWF 266
Score = 28.0 bits (63), Expect = 6.1
Identities = 6/26 (23%), Positives = 14/26 (53%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF 367
L+ ++L+++P R + D+F
Sbjct: 241 GLIKRMLIVNPLNRISIHEIMQDDWF 266
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 105 bits (263), Expect = 1e-25
Identities = 51/267 (19%), Positives = 84/267 (31%), Gaps = 87/267 (32%)
Query: 12 REIKILQ-LLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAG--LLSNI---- 64
RE+++ + ++V ++++ R +V + + G L S I
Sbjct: 59 REVELHWRASQCPHIVRIVDVYENLYAG----RKCLLIVMECLD----GGELFSRIQDRG 110
Query: 65 HVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTG---ILKLADFGLARAF 121
F+ E ++++ + + Y+HS I HRD+K N+L T ILKL DFG A
Sbjct: 111 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 167
Query: 122 SQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEM-------WTRSP 174
E Y D+W G IM + ++
Sbjct: 168 ----------------------KETT--GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 203
Query: 175 IMQGNTEQQQITLISQLCGSIT--PESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKD 232
T I G W V +VK
Sbjct: 204 ---LAISPGMKTRI--RMGQYEFPNPEWSEVSE---------------EVK--------- 234
Query: 233 QYGCDLLDKLLLLDPSKRFDSDAALNH 259
L+ LL +P++R +NH
Sbjct: 235 ----MLIRNLLKTEPTQRMTITEFMNH 257
Score = 32.3 bits (74), Expect = 0.27
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNH 364
L+ LL +P++R +NH
Sbjct: 235 MLIRNLLKTEPTQRMTITEFMNH 257
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 103 bits (260), Expect = 2e-25
Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 63/260 (24%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFSL 70
REI+ L+L +H +++ L ++ T + F++V ++ +L + H +
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTP--------TDFFMVMEYVSGGELFDYICK-HGRVEE 110
Query: 71 GEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQ-----TK 125
E +++ QQ+L+ + Y H + ++HRD+K NVL+ K+ADFGL+ S T
Sbjct: 111 MEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS 170
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQI 185
G N Y PE++ G GP VD+W G I+ +
Sbjct: 171 CGSPN----------YAAPEVISGRLYAGPEVDIWSCGVILYAL---------------- 204
Query: 186 TLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKE---RLKPYVKDQYGCDLLDKL 242
LCG++ P D + L +K++ + Y+ LL +
Sbjct: 205 -----LCGTL-P--------FDDEHVPTL----FKKIRGGVFYIPEYLNRS-VATLLMHM 245
Query: 243 LLLDPSKRFDSDAALNHDFF 262
L +DP KR H++F
Sbjct: 246 LQVDPLKRATIKDIREHEWF 265
Score = 27.9 bits (63), Expect = 5.3
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF 367
LL +L +DP KR H++F
Sbjct: 240 TLLMHMLQVDPLKRATIKDIREHEWF 265
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 104 bits (262), Expect = 2e-25
Identities = 64/273 (23%), Positives = 119/273 (43%), Gaps = 53/273 (19%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRY--RSTFYLVFDFCEHDLAGLLSNI--HV 66
E+ I++ +H NVV Y Y +++ +F + G L++I V
Sbjct: 90 FNEVVIMRDYQHFNVV----------EMYKSYLVGEELWVLMEFLQ---GGALTDIVSQV 136
Query: 67 KFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKN 126
+ + +I V + +L L Y+H+ ++HRD+K+ ++L+T G +KL+DFG +Q
Sbjct: 137 RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFC---AQISK 193
Query: 127 GQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMA-EMWTRSPIMQGNTEQQQI 185
R + V T ++ PE++ Y VD+W G IM EM P ++ Q +
Sbjct: 194 DVPKRKS-LVGTPYWMAPEVIS-RSLYATEVDIWSLG-IMVIEMVDGEPPYFSDSPVQAM 250
Query: 186 TLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLL 245
+ +S P PK + ++ P ++ D L+++L+
Sbjct: 251 KRL--------RDSPP-------------PKLKN---SHKVSPVLR-----DFLERMLVR 281
Query: 246 DPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQH 278
DP +R + L+H F +P L ++ +
Sbjct: 282 DPQERATAQELLDHPFLLQTGLPECLVPLIQLY 314
Score = 28.9 bits (65), Expect = 3.4
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQH 383
D L+++L+ DP +R + L+H F +P L ++ +
Sbjct: 273 DFLERMLVRDPQERATAQELLDHPFLLQTGLPECLVPLIQLY 314
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 104 bits (261), Expect = 4e-25
Identities = 34/267 (12%), Positives = 74/267 (27%), Gaps = 63/267 (23%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH----DLAGLLSNIHV 66
+ ++ L+ + +++ LV + + + L N
Sbjct: 115 TQLMERLKPSMQHMFMKFYSAHL--------FQNGSVLVGELYSYGTLLNAINLYKNTPE 166
Query: 67 K-FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGI-----------LKLAD 114
K G + ++L + +H +I+H D+K N ++ + L L D
Sbjct: 167 KVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALID 226
Query: 115 FGLARAFSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSP 174
G + G + +T + T ++ E+L + + +D +G + M
Sbjct: 227 LGQSIDMKLFPKGTI--FTAKCETSGFQCVEMLSN-KPWNYQIDYFGVAATVYCM----- 278
Query: 175 IMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQY 234
L G+ G E K + +
Sbjct: 279 ----------------LFGTYMKVKNEGGEC---------------KPEGLFRRLPHLDM 307
Query: 235 GCDLLDKLLLLDPSKRFDSDAALNHDF 261
+ +L + S L
Sbjct: 308 WNEFFHVMLNIPDCHHLPSLDLLRQKL 334
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 103 bits (258), Expect = 5e-25
Identities = 39/185 (21%), Positives = 81/185 (43%), Gaps = 20/185 (10%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
L+E+K+++ L+H NV+ I + + ++ + L G++ ++ ++
Sbjct: 55 LKEVKVMRCLEHPNVLKFIGVLYKDKR--------LNFITEYIKGGTLRGIIKSMDSQYP 106
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
+ + + +G+ Y+HS I+HRD+ + N L+ + + +ADFGLAR K
Sbjct: 107 WSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166
Query: 130 NRYTNRVVTLWYRP----------PELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGN 179
+ + R PE++ G R+Y VD++ G ++ E+ R
Sbjct: 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMING-RSYDEKVDVFSFGIVLCEIIGRVNADPDY 225
Query: 180 TEQQQ 184
+
Sbjct: 226 LPRTM 230
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 103 bits (258), Expect = 6e-25
Identities = 62/271 (22%), Positives = 105/271 (38%), Gaps = 49/271 (18%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRY--RSTFYLVFDFCEH-DLAGLLSNIHVKF 68
+EI I+Q +VV Y Y + ++V ++C ++ ++ +
Sbjct: 73 KEISIMQQCDSPHVV----------KYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTL 122
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
+ EI ++Q L GL Y+H + +HRD+KA N+L+ G KLADFG+A Q +
Sbjct: 123 TEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVA---GQLTDTM 179
Query: 129 VNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMA-EMWTRSPIMQGNTEQQQITL 187
R T + T ++ PE++ + Y D+W G I A EM P + I +
Sbjct: 180 AKRNT-VIGTPFWMAPEVIQ-EIGYNCVADIWSLG-ITAIEMAEGKPPYADIHPMRAIFM 236
Query: 188 ISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLLDP 247
I P +K E D + + L+ P
Sbjct: 237 IP---------------------TNPPPTFRK---PELWSDNFT-----DFVKQCLVKSP 267
Query: 248 SKRFDSDAALNHDFFWTDPMPSDLSKMLAQH 278
+R + L H F + S L ++ +
Sbjct: 268 EQRATATQLLQHPFVRSAKGVSILRDLINEA 298
Score = 28.1 bits (63), Expect = 5.0
Identities = 9/42 (21%), Positives = 18/42 (42%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQH 383
D + + L+ P +R + L H F + S L ++ +
Sbjct: 257 DFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSILRDLINEA 298
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 103 bits (259), Expect = 6e-25
Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 20/187 (10%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFSL 70
EI +L+HEN++ I + + +LV D+ EH L L+ ++
Sbjct: 85 AEIYQTVMLRHENILGFIAADNKDNGTWTQL----WLVSDYHEHGSLFDYLN--RYTVTV 138
Query: 71 GEIKKVIQQLLNGLYYIHSN--------KILHRDMKAANVLITKTGILKLADFGLARAFS 122
+ K+ +GL ++H I HRD+K+ N+L+ K G +AD GLA
Sbjct: 139 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 198
Query: 123 QTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPP-----VDLWGAGCIMAEMWTRSPIMQ 177
+ +RV T Y PE+L N D++ G + E+ R I
Sbjct: 199 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 258
Query: 178 GNTEQQQ 184
+ + Q
Sbjct: 259 IHEDYQL 265
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 102 bits (256), Expect = 1e-24
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
E+ +L+ +H N++ + TK N +V +CE L L KF
Sbjct: 80 RNEVAVLRKTRHVNILLFMGYM-TKDN--------LAIVTQWCEGSSLYKHLHVQETKFQ 130
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
+ ++ + +Q G+ Y+H+ I+HRDMK+ N+ + + +K+ DFGLA S+ Q
Sbjct: 131 MFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190
Query: 130 NRYTNRVVTLWYRPPELLLGDRN--YGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQI 185
++ + PE++ N + D++ G ++ E+ T + QI
Sbjct: 191 --VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI 246
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 102 bits (257), Expect = 1e-24
Identities = 57/260 (21%), Positives = 103/260 (39%), Gaps = 64/260 (24%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHVKFSLG 71
REI L+LL+H +++ L ++ T + +V ++ +L + + +
Sbjct: 58 REISYLKLLRHPHIIKLYDVITTP--------TDIVMVIEYAGGELFDYIVE-KKRMTED 108
Query: 72 EIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQ-----TKN 126
E ++ QQ++ + Y H +KI+HRD+K N+L+ +K+ADFGL+ + T
Sbjct: 109 EGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC 168
Query: 127 GQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQIT 186
G N Y PE++ G GP VD+W G ++ M
Sbjct: 169 GSPN----------YAAPEVINGKLYAGPEVDVWSCGIVLYVM----------------- 201
Query: 187 LISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKE---RLKPYVKDQYGC-DLLDKL 242
L G + P D L +KV + ++ G L+ ++
Sbjct: 202 ----LVGRL-P--------FDDEFIPNL----FKKVNSCVYVMPDFLSP--GAQSLIRRM 242
Query: 243 LLLDPSKRFDSDAALNHDFF 262
++ DP +R +F
Sbjct: 243 IVADPMQRITIQEIRRDPWF 262
Score = 27.2 bits (61), Expect = 9.6
Identities = 5/26 (19%), Positives = 12/26 (46%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFF 367
L+ ++++ DP +R +F
Sbjct: 237 SLIRRMIVADPMQRITIQEIRRDPWF 262
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 101 bits (254), Expect = 3e-24
Identities = 34/172 (19%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
RE+ + +HENVV + C + + ++ C+ L ++ + +
Sbjct: 77 KREVMAYRQTRHENVVLFMGACMSPPH--------LAIITSLCKGRTLYSVVRDAKIVLD 128
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTK-NGQ 128
+ + +++ Q+++ G+ Y+H+ ILH+D+K+ NV G + + DFGL + +
Sbjct: 129 VNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQAGRR 187
Query: 129 VNRYTNRVVTLWYRPPELLLGDRN--------YGPPVDLWGAGCIMAEMWTR 172
++ + L + PE++ + D++ G I E+ R
Sbjct: 188 EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR 239
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 101 bits (253), Expect = 3e-24
Identities = 60/271 (22%), Positives = 105/271 (38%), Gaps = 59/271 (21%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTF------YLVFDFCEHDLAGLLSNI 64
L+EI+ + H N+V Y ++F +LV G + +I
Sbjct: 61 LKEIQAMSQCHHPNIV--------------SYYTSFVVKDELWLVMKLLS---GGSVLDI 103
Query: 65 -----------HVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLA 113
I +++++L GL Y+H N +HRD+KA N+L+ + G +++A
Sbjct: 104 IKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIA 163
Query: 114 DFGLARAFSQTKNGQVNRYTNRVV-TLWYRPPELLLGDRNYGPPVDLWGAGCIMA-EMWT 171
DFG++ + + N+ V T + PE++ R Y D+W G I A E+ T
Sbjct: 164 DFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG-ITAIELAT 222
Query: 172 RSPIMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVK 231
+ + + L Q + P +L+ K +K + +
Sbjct: 223 GAAPYHKYPPMKVLMLTLQ---NDPP-------SLE---TGVQDKEMLKKYGKSFR---- 265
Query: 232 DQYGCDLLDKLLLLDPSKRFDSDAALNHDFF 262
++ L DP KR + L H FF
Sbjct: 266 -----KMISLCLQKDPEKRPTAAELLRHKFF 291
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 98.9 bits (247), Expect = 2e-23
Identities = 62/281 (22%), Positives = 113/281 (40%), Gaps = 50/281 (17%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
+ EI+IL H +V L+ Y +++ +FC + ++ + +
Sbjct: 64 IVEIEILATCDHPYIVKLLG-------AYYH-DGKLWIMIEFCPGGAVDAIMLELDRGLT 115
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
+I+ V +Q+L L ++HS +I+HRD+KA NVL+T G ++LADFG++ ++
Sbjct: 116 EPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS---AKNLKTLQ 172
Query: 130 NRYTNRVV-TLWYRPPELLLG----DRNYGPPVDLWGAGCIMA-EMWTRSPIMQGNTEQQ 183
R + + T ++ PE+++ D Y D+W G I EM P +
Sbjct: 173 KRDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG-ITLIEMAQIEPPHHELNPMR 229
Query: 184 QITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLL 243
+ I++ S P TL + + D L L
Sbjct: 230 VLLKIAK---SDPP-------TL--------------LTPSKWSVEFR-----DFLKIAL 260
Query: 244 LLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSMFE 284
+P R + L H F + L +++A+ + E
Sbjct: 261 DKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAKAEVME 301
Score = 27.3 bits (61), Expect = 9.7
Identities = 11/48 (22%), Positives = 19/48 (39%)
Query: 342 DLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSMFE 389
D L L +P R + L H F + L +++A+ + E
Sbjct: 254 DFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAKAEVME 301
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 100 bits (250), Expect = 4e-23
Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 63/260 (24%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFSL 70
REI+ L+L +H +++ L ++ T S ++V ++ +L + + +
Sbjct: 65 REIQNLKLFRHPHIIKLYQVISTP--------SDIFMVMEYVSGGELFDYICK-NGRLDE 115
Query: 71 GEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQ-----TK 125
E +++ QQ+L+G+ Y H + ++HRD+K NVL+ K+ADFGL+ S T
Sbjct: 116 KESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS 175
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQI 185
G N Y PE++ G GP VD+W +G I+ +
Sbjct: 176 CGSPN----------YAAPEVISGRLYAGPEVDIWSSGVILYAL---------------- 209
Query: 186 TLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKE---RLKPYVKDQYGCDLLDKL 242
LCG++ P D + L +K+ + Y+ LL +
Sbjct: 210 -----LCGTL-P--------FDDDHVPTL----FKKICDGIFYTPQYLNPS-VISLLKHM 250
Query: 243 LLLDPSKRFDSDAALNHDFF 262
L +DP KR H++F
Sbjct: 251 LQVDPMKRATIKDIREHEWF 270
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 96.6 bits (241), Expect = 7e-23
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
+E K+ +LKH N++ L +C + N LV +F L +LS +
Sbjct: 54 RQEAKLFAMLKHPNIIALRGVCLKEPN--------LCLVMEFARGGPLNRVLSGK--RIP 103
Query: 70 LGEIKKVIQQLLNGLYYIHSNK---ILHRDMKAANVLITKTG--------ILKLADFGLA 118
+ Q+ G+ Y+H I+HRD+K++N+LI + ILK+ DFGLA
Sbjct: 104 PDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
Query: 119 RAFSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTR 172
R + +T + + PE++ + D+W G ++ E+ T
Sbjct: 164 REWHRT------TKMSAAGAYAWMAPEVIRASM-FSKGSDVWSYGVLLWELLTG 210
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 96.9 bits (242), Expect = 8e-23
Identities = 59/269 (21%), Positives = 95/269 (35%), Gaps = 71/269 (26%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DL------AGLLSN 63
RE ++ L H V L + Y + ++ +L G
Sbjct: 78 TRERDVMSRLDHPFFVKLYFTFQDDEK--------LYFGLSYAKNGELLKYIRKIGSFDE 129
Query: 64 IHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQ 123
+F EI ++ L Y+H I+HRD+K N+L+ + +++ DFG A+
Sbjct: 130 TCTRFYTAEI-------VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---V 179
Query: 124 TKNGQVNRYTNRVV-TLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT-RSPIMQGNTE 181
N V T Y PELL ++ DLW GCI+ ++ P GN
Sbjct: 180 LSPESKQARANSFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNEY 238
Query: 182 Q--QQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLL 239
Q+I + + + P+ + P + DL+
Sbjct: 239 LIFQKI----------------------IKLEYDFPE--------KFFPKAR-----DLV 263
Query: 240 DKLLLLDPSKRF------DSDAALNHDFF 262
+KLL+LD +KR H FF
Sbjct: 264 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
Score = 31.8 bits (73), Expect = 0.34
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 7/48 (14%)
Query: 327 VKERLK-PYVKDQYGCDLLDKLLLLDPSKRF------DSDAALNHDFF 367
+K P DL++KLL+LD +KR H FF
Sbjct: 245 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 96.6 bits (241), Expect = 1e-22
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 18/167 (10%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL--SNIHVK 67
LRE+ I++ L+H N+V + N +V ++ L LL S +
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPN--------LSIVTEYLSRGSLYRLLHKSGAREQ 133
Query: 68 FSLGEIKKVIQQLLNGLYYIHSNK--ILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
+ + G+ Y+H+ I+HR++K+ N+L+ K +K+ DFGL+R + T
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTR 172
+ T + PE+L + D++ G I+ E+ T
Sbjct: 194 LSS----KSAAGTPEWMAPEVLRDEP-SNEKSDVYSFGVILWELATL 235
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 96.2 bits (240), Expect = 2e-22
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRY--RSTFYLVFDFCEHDLAGLLSNI--HVK 67
+EI +L V Y Y + +++ ++ G ++
Sbjct: 69 QEITVLSQCDSPYVTKY----------YGSYLKDTKLWIIMEYLG---GGSALDLLEPGP 115
Query: 68 FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNG 127
+I +++++L GL Y+HS K +HRD+KAANVL+++ G +KLADFG+A Q +
Sbjct: 116 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTDT 172
Query: 128 QVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMA-EMWTRSP 174
Q+ R T V T ++ PE++ Y D+W G I A E+ P
Sbjct: 173 QIKRNT-FVGTPFWMAPEVIK-QSAYDSKADIWSLG-ITAIELARGEP 217
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 97.0 bits (242), Expect = 2e-22
Identities = 56/263 (21%), Positives = 99/263 (37%), Gaps = 61/263 (23%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFSL 70
REI + L+H N+V E+ T + ++ ++ +L + N +FS
Sbjct: 65 REIINHRSLRHPNIVRFKEVILTP--------THLAIIMEYASGGELYERICN-AGRFSE 115
Query: 71 GEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLI--TKTGILKLADFGLARAFSQ----- 123
E + QQLL+G+ Y HS +I HRD+K N L+ + LK+ DFG +++
Sbjct: 116 DEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 175
Query: 124 TKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQ 183
+ G T Y PE+LL G D+W G + M
Sbjct: 176 STVG----------TPAYIAPEVLLRQEYDGKIADVWSCGVTLYVM-------------- 211
Query: 184 QITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKE---RLKPYVKDQYGC-DLL 239
L G+ P + + + +++ + ++ C L+
Sbjct: 212 -------LVGAY-P--------FEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLI 255
Query: 240 DKLLLLDPSKRFDSDAALNHDFF 262
++ + DP+ R H +F
Sbjct: 256 SRIFVADPATRISIPEIKTHSWF 278
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 95.9 bits (239), Expect = 2e-22
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 23/189 (12%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFSL 70
E+ L +KHEN++ I + + +L+ F E L+ L S
Sbjct: 67 YEVYSLPGMKHENILQFIGAEKRGTSVDVDL----WLITAFHEKGSLSDFLKA--NVVSW 120
Query: 71 GEIKKVIQQLLNGLYYIHSN----------KILHRDMKAANVLITKTGILKLADFGLARA 120
E+ + + + GL Y+H + I HRD+K+ NVL+ +ADFGLA
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180
Query: 121 FSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPP----VDLWGAGCIMAEMWTRSPIM 176
F K+ +V T Y PE+L G N+ +D++ G ++ E+ +R
Sbjct: 181 FEAGKSAGDT--HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAA 238
Query: 177 QGNTEQQQI 185
G ++ +
Sbjct: 239 DGPVDEYML 247
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 95.5 bits (238), Expect = 3e-22
Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 25/169 (14%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
+ E++ L + H N+V L C LV ++ E L +L
Sbjct: 49 IVELRQLSRVNHPNIVKLYGACLNP----------VCLVMEYAEGGSLYNVLHGAEPLPY 98
Query: 70 LGEIKKVI--QQLLNGLYYIHSNK---ILHRDMKAANVLITKTG-ILKLADFGLARAFSQ 123
+ Q G+ Y+HS + ++HRD+K N+L+ G +LK+ DFG A
Sbjct: 99 YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158
Query: 124 TKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTR 172
TN + + PE+ G NY D++ G I+ E+ TR
Sbjct: 159 HM-------TNNKGSAAWMAPEVFEG-SNYSEKCDVFSWGIILWEVITR 199
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 96.1 bits (239), Expect = 3e-22
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 27/182 (14%)
Query: 12 REIKILQLLKHENVVHLIEIC-RTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
+ I + L++H+N+ I R A+ Y LV ++ + L LS
Sbjct: 56 KNIYRVPLMEHDNIARFIVGDERVTADGRMEY----LLVMEYYPNGSLXKYLSL--HTSD 109
Query: 70 LGEIKKVIQQLLNGLYYIHS---------NKILHRDMKAANVLITKTGILKLADFGLARA 120
++ + GL Y+H+ I HRD+ + NVL+ G ++DFGL+
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
Query: 121 FSQTK---NGQVNRYTNRVV-TLWYRPPELLLGDRN------YGPPVDLWGAGCIMAEMW 170
+ + G+ + V T+ Y PE+L G N VD++ G I E++
Sbjct: 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
Query: 171 TR 172
R
Sbjct: 230 MR 231
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 95.1 bits (237), Expect = 3e-22
Identities = 32/171 (18%), Positives = 65/171 (38%), Gaps = 26/171 (15%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
RE+ I+ L H N+V L + +V +F DL L +
Sbjct: 71 QREVFIMSNLNHPNIVKLYGLMHNP----------PRMVMEFVPCGDLYHRLLDKAHPIK 120
Query: 70 LGEIKKVIQQLLNGLYYIHSNK--ILHRDMKAANVLITKTG-----ILKLADFGLARAFS 122
+++ + G+ Y+ + I+HRD+++ N+ + K+ADFGL++
Sbjct: 121 WSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV 180
Query: 123 QTKNGQVNRYTNRVVTLWYRPPELLLG-DRNYGPPVDLWGAGCIMAEMWTR 172
+ + + + PE + + +Y D + I+ + T
Sbjct: 181 HSV-------SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 92.1 bits (229), Expect = 5e-21
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 12 REIKIL-QLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCE----HDLAGLLSNIHV 66
+EI +L + H N+ K +LV +FC DL + +
Sbjct: 69 QEINMLKKYSHHRNIATYYGAFIKKNPP--GMDDQLWLVMEFCGAGSVTDL--IKNTKGN 124
Query: 67 KFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKN 126
I + +++L GL ++H +K++HRD+K NVL+T+ +KL DFG++ +Q
Sbjct: 125 TLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS---AQLDR 181
Query: 127 GQVNRYTNRVV-TLWYRPPELLLGDRN----YGPPVDLWGAGCIMA-EMWTRSP 174
R T + T ++ PE++ D N Y DLW G I A EM +P
Sbjct: 182 TVGRRNT--FIGTPYWMAPEVIACDENPDATYDFKSDLWSLG-ITAIEMAEGAP 232
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 92.6 bits (230), Expect = 6e-21
Identities = 58/276 (21%), Positives = 101/276 (36%), Gaps = 50/276 (18%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDL--------AGLLS 62
+RE+++L +V FY F + + ++ G L
Sbjct: 79 IRELQVLHECNSPYIVG------------------FYGAF-YSDGEISICMEHMDGGSLD 119
Query: 63 NI---HVKFSLGEIKKVIQQLLNGLYYIHSN-KILHRDMKAANVLITKTGILKLADFGLA 118
+ + + KV ++ GL Y+ KI+HRD+K +N+L+ G +KL DFG++
Sbjct: 120 QVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
Query: 119 RAFSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT-RSPIMQ 177
+ + V T Y PE L G +Y D+W G + EM R PI
Sbjct: 180 GQLIDSM-----ANSF-VGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPP 232
Query: 178 GNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRK--------VKERLKPY 229
+ ++ ++ Q+ G NK + V E
Sbjct: 233 PDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKL 292
Query: 230 VKDQYG---CDLLDKLLLLDPSKRFDSDAALNHDFF 262
+ D ++K L+ +P++R D + H F
Sbjct: 293 PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 328
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 92.6 bits (230), Expect = 3e-20
Identities = 45/223 (20%), Positives = 84/223 (37%), Gaps = 44/223 (19%)
Query: 47 YLVFDFCEH-DLAGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLIT 105
+ D DL LS H FS +++ +++ GL ++H+ +++RD+K AN+L+
Sbjct: 268 SFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD 326
Query: 106 KTGILKLADFGLARAFSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCI 165
+ G ++++D GLA + + V T Y PE+L Y D + GC+
Sbjct: 327 EHGHVRISDLGLA------CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM 380
Query: 166 MAEMWT-RSPIMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKE 224
+ ++ SP Q T+ + ++ +
Sbjct: 381 LFKLLRGHSPFRQHKTKDKH----------------------EIDRMT-------LTMAV 411
Query: 225 RLKPYVKDQYGCDLLDKLLLLDPSKRF-----DSDAALNHDFF 262
L + LL+ LL D ++R + FF
Sbjct: 412 ELPDSFSPE-LRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 89.6 bits (223), Expect = 3e-20
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCE-HDLAGLLSNIHVKFSL 70
RE+ L H+N+V +I++ +YLV ++ E L+ + + H S+
Sbjct: 60 REVHNSSQLSHQNIVSMIDVDEE--------DDCYYLVMEYIEGPTLSEYIES-HGPLSV 110
Query: 71 GEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQVN 130
Q+L+G+ + H +I+HRD+K N+LI LK+ DFG+A+A S+T Q
Sbjct: 111 DTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-- 168
Query: 131 RYTNRVV-TLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT 171
TN V+ T+ Y PE G+ D++ G ++ EM
Sbjct: 169 --TNHVLGTVQYFSPEQAKGEA-TDECTDIYSIGIVLYEMLV 207
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 88.9 bits (221), Expect = 6e-20
Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 14/199 (7%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
REI+IL+ L+H+N+V +C Y+ R L+ ++ + L L +
Sbjct: 59 EREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 112
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
++ + Q+ G+ Y+ + + +HRD+ N+L+ +K+ DFGL + Q K
Sbjct: 113 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK 172
Query: 130 NRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQITLIS 189
+ WY PE L + + D+W G ++ E++T +
Sbjct: 173 VKEPGESPIFWY-APESLT-ESKFSVASDVWSFGVVLYELFTY-----IEKSKSPPAEFM 225
Query: 190 QLCGSITPESWPGVETLDL 208
++ G+ ++L
Sbjct: 226 RMIGNDKQGQMIVFHLIEL 244
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 90.2 bits (224), Expect = 6e-20
Identities = 57/266 (21%), Positives = 87/266 (32%), Gaps = 61/266 (22%)
Query: 13 EIKILQLLKHENVVHLIEICRTKANQYNRYRSTF------YLVFDFCEH-DLAGLLSNIH 65
E +L + L F YLV ++ DL LLS
Sbjct: 111 ERDVLVNGDRRWITQL--------------HFAFQDENYLYLVMEYYVGGDLLTLLSKFG 156
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
+ + + +++ + +H +HRD+K N+L+ + G ++LADFG
Sbjct: 157 ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKL--RA 214
Query: 126 NGQVNRYTNRVVTLWYRPPELLLG------DRNYGPPVDLWGAGCIMAEMWTRSPIMQGN 179
+G V V T Y PE+L +YGP D W G EM
Sbjct: 215 DGTVRSLV-AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEM---------- 263
Query: 180 TEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLL 239
G TP + T + Y K+ K + L + D +
Sbjct: 264 -----------FYG-QTP--FYADSTAETYGKI---VHYKEHLSLPLVDEGVPEEARDFI 306
Query: 240 DKLLLLDPSKRF---DSDAALNHDFF 262
+ LL P R + H FF
Sbjct: 307 QR-LLCPPETRLGRGGAGDFRTHPFF 331
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 88.5 bits (220), Expect = 8e-20
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCE-HDLAGLLSNIHVKFSL 70
RE + L H +V + + + Y+V ++ + L ++ +
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLP----YIVMEYVDGVTLRDIVHT-EGPMTP 115
Query: 71 GEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQVN 130
+VI L + H N I+HRD+K AN++I+ T +K+ DFG+ARA + + N
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 131 RYTNRVV-TLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT 171
T V+ T Y PE GD D++ GC++ E+ T
Sbjct: 176 --TAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLT 214
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 86.9 bits (216), Expect = 1e-19
Identities = 24/169 (14%), Positives = 58/169 (34%), Gaps = 25/169 (14%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCE----HDLAGLLSNIHVK 67
E L++ H NV+ ++ C + L+ + +++ L +
Sbjct: 56 EECPRLRIFSHPNVLPVLGAC-QSPPAPH-----PTLITHWMPYGSLYNV--LHEGTNFV 107
Query: 68 FSLGEIKKVIQQLLNGLYYIHS--NKILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
+ K + G+ ++H+ I + + +V+I + +++ + +F
Sbjct: 108 VDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-- 165
Query: 126 NGQVNRYTNRVVTLWYRPPELLLGDRN--YGPPVDLWGAGCIMAEMWTR 172
R+ + PE L D+W ++ E+ TR
Sbjct: 166 -------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTR 207
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 87.8 bits (218), Expect = 2e-19
Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 14/199 (7%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
REI+IL+ L+H+N+V +C Y+ R L+ ++ + L L +
Sbjct: 90 EREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 143
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
++ + Q+ G+ Y+ + + +HRD+ N+L+ +K+ DFGL + Q K
Sbjct: 144 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYK 203
Query: 130 NRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQITLIS 189
+ WY PE L + + D+W G ++ E++T +
Sbjct: 204 VKEPGESPIFWY-APESLT-ESKFSVASDVWSFGVVLYELFTY-----IEKSKSPPAEFM 256
Query: 190 QLCGSITPESWPGVETLDL 208
++ G+ ++L
Sbjct: 257 RMIGNDKQGQMIVFHLIEL 275
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 88.3 bits (219), Expect = 3e-19
Identities = 62/353 (17%), Positives = 101/353 (28%), Gaps = 101/353 (28%)
Query: 13 EIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFSLG 71
E +L + + L + N YLV D+ DL LLS +
Sbjct: 124 ERDVLVNGDSKWITTLHYAFQDDNN--------LYLVMDYYVGGDLLTLLSKFEDRLPEE 175
Query: 72 EIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQVNR 131
+ + +++ + +H +HRD+K N+L+ G ++LADFG ++G V
Sbjct: 176 MARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKL--MEDGTVQS 233
Query: 132 YTNRVVTLWYRPPELLL----GDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQITL 187
V T Y PE+L G YGP D W G M EM + +
Sbjct: 234 SV-AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK 292
Query: 188 ISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLLDP 247
I ++ + + P + DL+ + L+
Sbjct: 293 I-----------------MNHKERFQFPTQVTDVSEN----------AKDLIRR-LICSR 324
Query: 248 SKRF---DSDAALNHDFF----WTD-------------------------------PMPS 269
R + H FF W +
Sbjct: 325 EHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNFDVDDDCLKNSETMP 384
Query: 270 DLSKMLAQHTQSMFE---YLAP----------------PRRPGHMRAHHHHHH 303
+ F Y + + ++HHHHHH
Sbjct: 385 PPTHTAFSGHHLPFVGFTYTSSCVLSDRSCLRVTAGPTSAENLYFQSHHHHHH 437
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 86.9 bits (216), Expect = 3e-19
Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 20/173 (11%)
Query: 12 REIKILQLLKHENVVHLIEICRTKANQYNR--YRSTFYLVFDFCE-HDLAGLLSNIHVKF 68
RE + L+ +VV + ++ Y+ DLA +L
Sbjct: 83 REARTAGRLQEPHVVPI----------HDFGEIDGQLYVDMRLINGVDLAAMLRR-QGPL 131
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
+ +++Q+ + L H+ HRD+K N+L++ L DFG+A A + K Q
Sbjct: 132 APPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQ 191
Query: 129 VNRYTNRVV-TLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNT 180
V TL+Y PE D++ C++ E T SP QG+
Sbjct: 192 ----LGNTVGTLYYMAPERFSESH-ATYRADIYALTCVLYECLTGSPPYQGDQ 239
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 86.2 bits (214), Expect = 5e-19
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
+EI+IL+ L HEN+V IC + L+ +F L L K +
Sbjct: 71 KKEIEILRNLYHENIVKYKGIC------TEDGGNGIKLIMEFLPSGSLKEYLPKNKNKIN 124
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
L + K Q+ G+ Y+ S + +HRD+ A NVL+ +K+ DFGL +A K
Sbjct: 125 LKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY-- 182
Query: 130 NRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT 171
YT + WY PE L+ + D+W G + E+ T
Sbjct: 183 --YTVKDDRDSPVFWY-APECLM-QSKFYIASDVWSFGVTLHELLT 224
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 85.9 bits (213), Expect = 8e-19
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
REI+IL+ L + +V + Y R + LV ++ L L +
Sbjct: 72 QREIQILKALHSDFIVKYRGVS------YGPGRQSLRLVMEYLPSGCLRDFLQRHRARLD 125
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
+ Q+ G+ Y+ S + +HRD+ A N+L+ +K+ADFGLA+ K+ V
Sbjct: 126 ASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 185
Query: 130 NRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT 171
R + WY PE L D + D+W G ++ E++T
Sbjct: 186 VREPGQSPIFWY-APESLS-DNIFSRQSDVWSFGVVLYELFT 225
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 86.6 bits (215), Expect = 9e-19
Identities = 56/264 (21%), Positives = 92/264 (34%), Gaps = 63/264 (23%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTF------YLVFDFCEH-DLAGLLSN 63
+E++I+Q L+H +V+L +F ++V D DL L
Sbjct: 63 FKELQIMQGLEHPFLVNL--------------WYSFQDEEDMFMVVDLLLGGDLRYHLQQ 108
Query: 64 IHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQ 123
+V F +K I +L+ L Y+ + +I+HRDMK N+L+ + G + + DF +A
Sbjct: 109 -NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIA----- 162
Query: 124 TKNGQVNRYTNRVV-TLWYRPPELLLGDRN--YGPPVDLWGAGCIMAEMWTRSPIMQGNT 180
+ T Y PE+ + Y VD W G E+
Sbjct: 163 -AMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYEL----------- 210
Query: 181 EQQQITLISQLCGSITP-ESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLL 239
L G P + ++ + + V Q LL
Sbjct: 211 ----------LRG-RRPYHIRSSTSSKEIVHTF-----ETTVV--TYPSAW-SQEMVSLL 251
Query: 240 DKLLLLDPSKRF-DSDAALNHDFF 262
KLL +P +RF N +
Sbjct: 252 KKLLEPNPDQRFSQLSDVQNFPYM 275
Score = 28.8 bits (65), Expect = 3.8
Identities = 9/29 (31%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query: 340 GCDLLDKLLLLDPSKRF-DSDAALNHDFF 367
LL KLL +P +RF N +
Sbjct: 247 MVSLLKKLLEPNPDQRFSQLSDVQNFPYM 275
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 86.2 bits (214), Expect = 9e-19
Identities = 60/267 (22%), Positives = 101/267 (37%), Gaps = 77/267 (28%)
Query: 13 EIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCE-----HDL--AGLLSNIH 65
E +ILQ + +V L + +N Y+V ++ L G S H
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN--------LYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
+F +I + Y+HS +++RD+K N+LI + G +++ DFG A+
Sbjct: 143 ARFYAAQI-------VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------ 189
Query: 126 NGQVNRYTNRVV-TLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQ 184
+V T + T PE++L + Y VD W G ++ EM
Sbjct: 190 --RVKGRTWTLCGTPEALAPEIILS-KGYNKAVDWWALGVLIYEM--------------- 231
Query: 185 ITLISQLCGSITPESWP---GVETLDLYNKMELPKAQKRKVKERLK-PYVKDQYGCDLLD 240
G +P + + +Y K+ V +++ P DLL
Sbjct: 232 ------AAG------YPPFFADQPIQIYEKI---------VSGKVRFPSHFSSDLKDLLR 270
Query: 241 KLLLLDPSKRF-----DSDAALNHDFF 262
LL +D +KRF + NH +F
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297
Score = 29.9 bits (68), Expect = 1.7
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
Query: 323 YHDRVKERLK-PYVKDQYGCDLLDKLLLLDPSKRF-----DSDAALNHDFF 367
Y V +++ P DLL LL +D +KRF + NH +F
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 83.9 bits (208), Expect = 4e-18
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 11/162 (6%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
+EI IL+ L HE+++ C + ++ LV ++ L L H
Sbjct: 81 KQEIDILRTLYHEHIIKYKGCC------EDAGAASLQLVMEYVPLGSLRDYLPR-H-SIG 132
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
L ++ QQ+ G+ Y+H+ +HRD+ A NVL+ ++K+ DFGLA+A +
Sbjct: 133 LAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 192
Query: 130 NRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT 171
R WY PE L + + D+W G + E+ T
Sbjct: 193 VREDGDSPVFWY-APECLK-EYKFYYASDVWSFGVTLYELLT 232
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 83.4 bits (207), Expect = 5e-18
Identities = 53/265 (20%), Positives = 90/265 (33%), Gaps = 73/265 (27%)
Query: 13 EIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCE-----HDL--AGLLSNIH 65
E +L ++ H ++ + + +++ D+ E L + N
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQ--------IFMIMDYIEGGELFSLLRKSQRFPNPV 107
Query: 66 VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTK 125
KF E+ L Y+HS I++RD+K N+L+ K G +K+ DFG A+
Sbjct: 108 AKFYAAEV-------CLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 160
Query: 126 N---GQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQ 182
G T Y PE++ Y +D W G ++ EM +
Sbjct: 161 YTLCG----------TPDYIAPEVVSTKP-YNKSIDWWSFGILIYEMLAGYTPFYDSNTM 209
Query: 183 QQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKL 242
+ I L ++ P VK DLL +L
Sbjct: 210 KTYEKI-------------------LNAELRFPP--------FFNEDVK-----DLLSRL 237
Query: 243 LLLDPSKRF-----DSDAALNHDFF 262
+ D S+R ++ NH +F
Sbjct: 238 ITRDLSQRLGNLQNGTEDVKNHPWF 262
Score = 30.2 bits (69), Expect = 1.4
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Query: 337 DQYGCDLLDKLLLLDPSKRF-----DSDAALNHDFF 367
++ DLL +L+ D S+R ++ NH +F
Sbjct: 227 NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 262
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 83.5 bits (207), Expect = 5e-18
Identities = 55/308 (17%), Positives = 110/308 (35%), Gaps = 64/308 (20%)
Query: 11 LREIKI-LQLLKHENVVHLIEICRTKANQYNRY--RSTFYLVFDFCEHDLAGLLSNIHVK 67
L ++ + ++ +V Y ++ + ++
Sbjct: 68 LMDLDVVMRSSDCPYIVQF----------YGALFREGDCWICMELMSTSFDKFYKYVYSV 117
Query: 68 FS--LGE--IKKVIQQLLNGLYYIHSN-KILHRDMKAANVLITKTGILKLADFGLARAFS 122
+ E + K+ + L ++ N KI+HRD+K +N+L+ ++G +KL DFG++
Sbjct: 118 LDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177
Query: 123 QTKNGQVNRYTNRVVTLWYRPPELLLGDRN---YGPPVDLWGAGCIMAEMWT-RSPIMQG 178
+ T Y PE + + Y D+W G + E+ T R P +
Sbjct: 178 DSIAK-----TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKW 232
Query: 179 NTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYG--- 235
N+ Q+T + K + P +L + ++
Sbjct: 233 NSVFDQLTQVV---------------------KGDPP---------QLSNSEEREFSPSF 262
Query: 236 CDLLDKLLLLDPSKRFDSDAALNHDFFWT-DPMPSDLSKMLAQHTQSMFEYLAPPRRPGH 294
+ ++ L D SKR L H F + +++ + + + + A P P +
Sbjct: 263 INFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYV---CKILDQMPATPSSPMY 319
Query: 295 MRAHHHHH 302
+ HHHHH
Sbjct: 320 VDHHHHHH 327
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 84.8 bits (210), Expect = 6e-18
Identities = 55/276 (19%), Positives = 84/276 (30%), Gaps = 78/276 (28%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTF------YLVFDFC---------- 53
A+ E KIL + +V L F LV
Sbjct: 232 AMVEKKILAKVHSRFIVSL--------------AYAFETKTDLCLVMTIMNGGDIRYHIY 277
Query: 54 -EHDLAGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKL 112
+ F +I ++GL ++H I++RD+K NVL+ G +++
Sbjct: 278 NVDEDNPGFQEPRAIFYTAQI-------VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRI 330
Query: 113 ADFGLARAFSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT- 171
+D GLA + + T + PELLLG+ Y VD + G + EM
Sbjct: 331 SDLGLAVELKAGQ----TKTKGYAGTPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAA 385
Query: 172 RSPIMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVK 231
R P + VE +L ++ +
Sbjct: 386 RGPFRARGEK---------------------VENKELKQRV-------LEQAVTYPDKF- 416
Query: 232 DQYGCDLLDKLLLLDPSKRF-----DSDAALNHDFF 262
D + LL DP KR D H F
Sbjct: 417 SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLF 452
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 83.6 bits (207), Expect = 1e-17
Identities = 68/257 (26%), Positives = 95/257 (36%), Gaps = 49/257 (19%)
Query: 13 EIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCE-HDLAGLLSNIHVKFSLG 71
E I+ VV L A Q +RY Y+V ++ DL L+SN
Sbjct: 119 ERDIMAFANSPWVVQL-----FYAFQDDRY---LYMVMEYMPGGDLVNLMSN--YDVPEK 168
Query: 72 EIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQVNR 131
+ +++ L IHS +HRD+K N+L+ K+G LKLADFG K G V
Sbjct: 169 WARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM--NKEGMVRC 226
Query: 132 YTNRVVTLWYRPPELLL---GDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQITLI 188
T V T Y PE+L GD YG D W G + EM
Sbjct: 227 DT-AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM------------------- 266
Query: 189 SQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLLDPS 248
L G TP + + Y+K+ K + + + +L+ L D
Sbjct: 267 --LVG-DTP--FYADSLVGTYSKI---MNHKNSLTFPDDNDISKE-AKNLICA-FLTDRE 316
Query: 249 KRF---DSDAALNHDFF 262
R + H FF
Sbjct: 317 VRLGRNGVEEIKRHLFF 333
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 84.1 bits (208), Expect = 1e-17
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL-SNIHVKF 68
L+E +++ +KH N+V L+ +C + FY++ +F + +L L +
Sbjct: 264 LKEAAVMKEIKHPNLVQLLGVCTRE--------PPFYIITEFMTYGNLLDYLRECNRQEV 315
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
S + + Q+ + + Y+ +HR++ A N L+ + ++K+ADFGL+R +
Sbjct: 316 SAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG----- 370
Query: 129 VNRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT 171
+ YT W P L + D+W G ++ E+ T
Sbjct: 371 -DTYTAHAGAKFPIKWTAPESLA--YNKFSIKSDVWAFGVLLWEIAT 414
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 82.0 bits (203), Expect = 2e-17
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 11/162 (6%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
L E I+ H N++ L + T+ +V ++ E+ L L +F+
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVV-TR-------GRLAMIVTEYMENGSLDTFLRTHDGQFT 149
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
+ ++ +++ + G+ Y+ +HRD+ A NVL+ + K++DFGL+R +
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209
Query: 130 NRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT 171
++ W PE + R + D+W G +M E+
Sbjct: 210 TTTGGKIPIRWT-APEAIA-FRTFSSASDVWSFGVVMWEVLA 249
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 81.1 bits (201), Expect = 2e-17
Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 20/167 (11%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
+RE+ + L H N++ L + T +V + L L F
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLT---------PPMKMVTELAPLGSLLDRLRKHQGHFL 119
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
LG + + Q+ G+ Y+ S + +HRD+ A N+L+ ++K+ DFGL RA Q
Sbjct: 120 LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND---- 175
Query: 130 NRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTR 172
+ Y + W PE L R + D W G + EM+T
Sbjct: 176 DHYVMQEHRKVPFAWC-APESLK-TRTFSHASDTWMFGVTLWEMFTY 220
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 83.4 bits (206), Expect = 3e-17
Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 22/166 (13%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
L+E ++ H ++V LI + T+ + +++ + C +L L
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVI-TE--------NPVWIIMELCTLGELRSFLQVRKFSLD 489
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
L + QL L Y+ S + +HRD+ A NVL++ +KL DFGL+R +
Sbjct: 490 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST---- 545
Query: 130 NRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT 171
Y W PE + R + D+W G M E+
Sbjct: 546 --YYKASKGKLPIKWM-APESIN-FRRFTSASDVWMFGVCMWEILM 587
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 82.0 bits (203), Expect = 3e-17
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 11/162 (6%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
L E I+ H N++ L + TK +V ++ E+ L L +F+
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVV-TK-------SKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
+ ++ +++ + +G+ Y+ +HRD+ A N+LI + K++DFGL R
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAY 205
Query: 130 NRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT 171
++ W PE + R + D+W G ++ E+ +
Sbjct: 206 TTRGGKIPIRWT-SPEAIA-YRKFTSASDVWSYGIVLWEVMS 245
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 83.4 bits (206), Expect = 3e-17
Identities = 31/166 (18%), Positives = 65/166 (39%), Gaps = 18/166 (10%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCE-HDLAGLLSNIHVKF 68
A+ E + L + H ++V + + Y+V ++ L K
Sbjct: 126 AMAERQFLAEVVHPSIVQIFNFVEHTDRHGD---PVGYIVMEYVGGQSLKRSKGQ---KL 179
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
+ E + ++L L Y+HS +++ D+K N+++T+ + KL D G + G
Sbjct: 180 PVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQL-KLIDLGAVSRINSF--GY 236
Query: 129 VNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSP 174
+ T ++ PE++ D++ G +A + P
Sbjct: 237 L------YGTPGFQAPEIVRTGP--TVATDIYTVGRTLAALTLDLP 274
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 80.7 bits (200), Expect = 3e-17
Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 22/166 (13%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
L+E ++ H ++V LI + + +++ + C +L L
Sbjct: 64 LQEALTMRQFDHPHIVKLIGVIT---------ENPVWIIMELCTLGELRSFLQVRKYSLD 114
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
L + QL L Y+ S + +HRD+ A NVL++ +KL DFGL+R +
Sbjct: 115 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------ED 168
Query: 130 NRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT 171
+ Y W PE + R + D+W G M E+
Sbjct: 169 STYYKASKGKLPIKWM-APESIN-FRRFTSASDVWMFGVCMWEILM 212
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 82.3 bits (203), Expect = 3e-17
Identities = 69/341 (20%), Positives = 120/341 (35%), Gaps = 111/341 (32%)
Query: 9 TALREIKILQLLK--------HENVVHLIE-----------ICRTKANQYNRYRSTFYLV 49
TAL EI++L+ ++ E VV L++ IC +V
Sbjct: 79 TALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC---------------MV 123
Query: 50 FDFCEHDLAGLL-SNIHVKFSLGEIKKVIQQLLNGLYYIHS-NKILHRDMKAANVLIT-- 105
F+ H L + + + L +KK+IQQ+L GL Y+H+ +I+H D+K N+L++
Sbjct: 124 FEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN 183
Query: 106 -----------------------------------------------KTGILKLADFGLA 118
+ +K+AD G A
Sbjct: 184 EQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNA 243
Query: 119 RAFSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQG 178
+ +T + T YR E+L+G Y P D+W C+ E+ T + +
Sbjct: 244 CWVHKH-------FTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEP 295
Query: 179 ------NTEQQQITLISQLCGSITPESWPGVETLDLY-----NKMELPKAQKRKVKERLK 227
++ I LI +L G + + + + + + K + + E L
Sbjct: 296 HSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLV 355
Query: 228 PYV------KDQYGCDLLDKLLLLDPSKRFDSDAALNHDFF 262
+ D L +L L P KR + L H +
Sbjct: 356 EKYEWSQEEAAGF-TDFLLPMLELIPEKRATAAECLRHPWL 395
Score = 28.7 bits (64), Expect = 4.5
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 341 CDLLDKLLLLDPSKRFDSDAALNHDFF 367
D L +L L P KR + L H +
Sbjct: 369 TDFLLPMLELIPEKRATAAECLRHPWL 395
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 80.8 bits (200), Expect = 3e-17
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 12/163 (7%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
+RE +I+ L + +V LI +C+ + LV + L L +
Sbjct: 58 MREAQIMHQLDNPYIVRLIGVCQAE---------ALMLVMEMAGGGPLHKFLVGKREEIP 108
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
+ + +++ Q+ G+ Y+ +HRD+ A NVL+ K++DFGL++A +
Sbjct: 109 VSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168
Query: 130 NRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTR 172
R + WY PE + R + D+W G M E +
Sbjct: 169 ARSAGKWPLKWY-APECIN-FRKFSSRSDVWSYGVTMWEALSY 209
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 80.3 bits (199), Expect = 3e-17
Identities = 39/187 (20%), Positives = 81/187 (43%), Gaps = 24/187 (12%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
+E + + L H +V +C +K Y+V ++ + L L +
Sbjct: 51 FQEAQTMMKLSHPKLVKFYGVC-SK-------EYPIYIVTEYISNGCLLNYLRSHGKGLE 102
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
++ ++ + G+ ++ S++ +HRD+ A N L+ + +K++DFG+ R
Sbjct: 103 PSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD------ 156
Query: 130 NRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT--RSPIMQGNTEQQ 183
++Y + V T W PE+ Y D+W G +M E+++ + P T +
Sbjct: 157 DQYVSSVGTKFPVKWS-APEVFH-YFKYSSKSDVWAFGILMWEVFSLGKMP-YDLYTNSE 213
Query: 184 QITLISQ 190
+ +SQ
Sbjct: 214 VVLKVSQ 220
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 82.9 bits (205), Expect = 3e-17
Identities = 54/263 (20%), Positives = 93/263 (35%), Gaps = 55/263 (20%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIH-VK 67
AL E +IL+ + VV L TK LV DL + ++
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETK--------DALCLVLTLMNGGDLKFHIYHMGQAG 282
Query: 68 FSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNG 127
F ++ GL +H +I++RD+K N+L+ G ++++D GLA +
Sbjct: 283 FPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA------VHV 336
Query: 128 QVNRYTN-RVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT-RSPIMQGNTEQQQI 185
+ RV T+ Y PE++ +R Y D W GC++ EM +SP
Sbjct: 337 PEGQTIKGRVGTVGYMAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSP----------- 384
Query: 186 TLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLK-PYVKDQYGCDLLDKLLL 244
+ + ++E + + + L +LL
Sbjct: 385 --------------FQQRKKKIKREEVE-----RLVKEVPEEYSERFSPQARSLCSQLLC 425
Query: 245 LDPSKRF-----DSDAALNHDFF 262
DP++R + H F
Sbjct: 426 KDPAERLGCRGGSAREVKEHPLF 448
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 79.9 bits (198), Expect = 4e-17
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 21/166 (12%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
+ E +++ L H +V L +C + ++ LV +F EH L+ L F+
Sbjct: 51 IEEAEVMMKLSHPKLVQLYGVC-LE-------QAPICLVTEFMEHGCLSDYLRTQRGLFA 102
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
+ + + G+ Y+ ++HRD+ A N L+ + ++K++DFG+ R
Sbjct: 103 AETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD------ 156
Query: 130 NRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT 171
++YT+ T W PE+ Y D+W G +M E+++
Sbjct: 157 DQYTSSTGTKFPVKWA-SPEVFS-FSRYSSKSDVWSFGVLMWEVFS 200
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 81.5 bits (202), Expect = 4e-17
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
L+E +IL+ H N+V LI +C + Y+V + + D L +
Sbjct: 160 LQEARILKQYSHPNIVRLIGVCTQ--------KQPIYIVMELVQGGDFLTFLRTEGARLR 211
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLAR 119
+ + +++ G+ Y+ S +HRD+ A N L+T+ +LK++DFG++R
Sbjct: 212 VKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR 261
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 79.6 bits (197), Expect = 6e-17
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL-SNIHVKF 68
L E +++ L+H+ +V L + T+ Y++ ++ E+ L L + +K
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVV-TQ--------EPIYIITEYMENGSLVDFLKTPSGIKL 106
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
++ ++ + Q+ G+ +I +HRD++AAN+L++ T K+ADFGLAR
Sbjct: 107 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED----- 161
Query: 129 VNRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT--RSP 174
N YT R W PE + + D+W G ++ E+ T R P
Sbjct: 162 -NEYTAREGAKFPIKWT-APEAIN-YGTFTIKSDVWSFGILLTEIVTHGRIP 210
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 81.0 bits (200), Expect = 8e-17
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL-SNIHVKF 68
L+E ++++ L+HE +V L + Y+V ++ L L
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVVS---------EEPIYIVTEYMSKGSLLDFLKGETGKYL 277
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
L ++ + Q+ +G+ Y+ +HRD++AAN+L+ + + K+ADFGLAR +
Sbjct: 278 RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI------E 331
Query: 129 VNRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT 171
N YT R W PE L + D+W G ++ E+ T
Sbjct: 332 DNEYTARQGAKFPIKWT-APEAAL-YGRFTIKSDVWSFGILLTELTT 376
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 80.0 bits (198), Expect = 9e-17
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 21/167 (12%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
L E ++ + + +V L+ IC T ST L+ L +
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLT---------STVQLITQLMPFGCLLDYVREHKDNIG 115
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
+ Q+ G+ Y+ +++HRD+ A NVL+ +K+ DFGLA+ +
Sbjct: 116 SQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK--- 172
Query: 130 NRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTR 172
+ W E +L R Y D+W G + E+ T
Sbjct: 173 --EYHAEGGKVPIKWM-ALESIL-HRIYTHQSDVWSYGVTVWELMTF 215
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 79.2 bits (196), Expect = 1e-16
Identities = 42/166 (25%), Positives = 83/166 (50%), Gaps = 21/166 (12%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
+ E K++ L HE +V L +C TK + +++ ++ + L L + +F
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVC-TK-------QRPIFIITEYMANGCLLNYLREMRHRFQ 118
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
++ ++ + + + Y+ S + LHRD+ A N L+ G++K++DFGL+R
Sbjct: 119 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD------ 172
Query: 130 NRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT 171
+ YT+ V + W PPE+L+ + D+W G +M E+++
Sbjct: 173 DEYTSSVGSKFPVRWS-PPEVLM-YSKFSSKSDIWAFGVLMWEIYS 216
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 79.7 bits (197), Expect = 1e-16
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
L E I+ H N++ L + +K ++ ++ E+ L L +FS
Sbjct: 94 LGEAGIMGQFSHHNIIRLEGVI-SKYK-------PMMIITEYMENGALDKFLREKDGEFS 145
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
+ ++ +++ + G+ Y+ + +HRD+ A N+L+ + K++DFGL+R
Sbjct: 146 VLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATY 205
Query: 130 NRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT 171
++ W PE + R + D+W G +M E+ T
Sbjct: 206 TTSGGKIPIRWT-APEAIS-YRKFTSASDVWSFGIVMWEVMT 245
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 78.4 bits (194), Expect = 1e-16
Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 22/167 (13%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
+ E I++ L H ++V LI I +++ + + +L L
Sbjct: 61 MSEAVIMKNLDHPHIVKLIGIIE---------EEPTWIIMELYPYGELGHYLERNKNSLK 111
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
+ + Q+ + Y+ S +HRD+ N+L+ +KL DFGL+R
Sbjct: 112 VLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED---- 167
Query: 130 NRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTR 172
Y VT W PE + R + D+W M E+ +
Sbjct: 168 --YYKASVTRLPIKWM-SPESIN-FRRFTTASDVWMFAVCMWEILSF 210
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 78.0 bits (193), Expect = 2e-16
Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 27/172 (15%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL-SNIHVKF 68
L E ++ L+H N+V L+ + + Y+V ++ L L S
Sbjct: 62 LAEASVMTQLRHSNLVQLLGVI-------VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 114
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
+ K + + Y+ N +HRD+ A NVL+++ + K++DFGL +
Sbjct: 115 GGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK--------- 165
Query: 129 VNRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT--RSP 174
+ + W PE L ++ + D+W G ++ E+++ R P
Sbjct: 166 -EASSTQDTGKLPVKWT-APEALR-EKKFSTKSDVWSFGILLWEIYSFGRVP 214
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 78.1 bits (193), Expect = 2e-16
Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAG-LLSNIHVKF 68
L+E +++ +KH N+V L+ +C T+ FY++ +F + +L L +
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVC-TR-------EPPFYIITEFMTYGNLLDYLRECNRQEV 108
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
S + + Q+ + + Y+ +HRD+ A N L+ + ++K+ADFGL+R +
Sbjct: 109 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG----- 163
Query: 129 VNRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT--RSP 174
+ YT W PE L + D+W G ++ E+ T SP
Sbjct: 164 -DTYTAHAGAKFPIKWT-APESLA-YNKFSIKSDVWAFGVLLWEIATYGMSP 212
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 80.4 bits (198), Expect = 2e-16
Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 12/163 (7%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
+RE +I+ L + +V LI +C+ LV + L L +
Sbjct: 384 MREAQIMHQLDNPYIVRLIGVCQ---------AEALMLVMEMAGGGPLHKFLVGKREEIP 434
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
+ + +++ Q+ G+ Y+ +HR++ A NVL+ K++DFGL++A +
Sbjct: 435 VSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494
Query: 130 NRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTR 172
R + WY PE + R + D+W G M E +
Sbjct: 495 ARSAGKWPLKWY-APECIN-FRKFSSRSDVWSYGVTMWEALSY 535
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 79.9 bits (197), Expect = 2e-16
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL-SNIHVKF 68
L+E ++++ L+HE +V L + Y+V ++ L L
Sbjct: 310 LQEAQVMKKLRHEKLVQLYAVVS---------EEPIYIVTEYMSKGSLLDFLKGETGKYL 360
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
L ++ + Q+ +G+ Y+ +HRD++AAN+L+ + + K+ADFGLAR +
Sbjct: 361 RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI------E 414
Query: 129 VNRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT 171
N YT R W PE L + D+W G ++ E+ T
Sbjct: 415 DNEYTARQGAKFPIKWT-APEAAL-YGRFTIKSDVWSFGILLTELTT 459
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 77.7 bits (192), Expect = 3e-16
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
L E ++Q L + +V +I IC ++ LV + E L L +
Sbjct: 66 LAEANVMQQLDNPYIVRMIGICE---------AESWMLVMEMAELGPLNKYLQQ-NRHVK 115
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
I +++ Q+ G+ Y+ + +HRD+ A NVL+ K++DFGL++A +N
Sbjct: 116 DKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY-- 173
Query: 130 NRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTR 172
Y + WY PE + + D+W G +M E ++
Sbjct: 174 --YKAQTHGKWPVKWY-APECIN-YYKFSSKSDVWSFGVLMWEAFSY 216
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 79.4 bits (196), Expect = 3e-16
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 25/172 (14%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL-SNIHVKF 68
L E +++ L+H+ +V L + + Y++ +F L L S+ K
Sbjct: 231 LAEANVMKTLQHDKLVKLHAVV---------TKEPIYIITEFMAKGSLLDFLKSDEGSKQ 281
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
L ++ Q+ G+ +I +HRD++AAN+L++ + + K+ADFGLAR
Sbjct: 282 PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED----- 336
Query: 129 VNRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT--RSP 174
N YT R W PE + ++ D+W G ++ E+ T R P
Sbjct: 337 -NEYTAREGAKFPIKWT-APEAIN-FGSFTIKSDVWSFGILLMEIVTYGRIP 385
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 77.6 bits (192), Expect = 6e-16
Identities = 62/276 (22%), Positives = 100/276 (36%), Gaps = 82/276 (29%)
Query: 13 EIKILQLLKHENVVHLIEICRTKANQYNRYRSTF------YLVFDFCEH-DL------AG 59
E IL + H +V L F YL+ DF DL
Sbjct: 76 ERDILVEVNHPFIVKL--------------HYAFQTEGKLYLILDFLRGGDLFTRLSKEV 121
Query: 60 LLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLAR 119
+ + VKF L E+ L ++HS I++RD+K N+L+ + G +KL DFGL++
Sbjct: 122 MFTEEDVKFYLAEL-------ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK 174
Query: 120 AFSQTKNGQVNRYTNRVV-TLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQG 178
++ + T+ Y PE++ R + D W G +M EM T + QG
Sbjct: 175 -----ESIDHEKKAYSFCGTVEYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGTLPFQG 228
Query: 179 NTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDL 238
++ +T+I L K+ +P+ + + L
Sbjct: 229 KDRKETMTMI-------------------LKAKLGMPQFLSPEAQ-------------SL 256
Query: 239 LDKLLLLDPSKRF-----DSDAALNHDFF----WTD 265
L L +P+ R + H FF W
Sbjct: 257 LRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNK 292
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 78.5 bits (194), Expect = 6e-16
Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 27/172 (15%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL-SNIHVKF 68
L E ++ L+H N+V L+ + + Y+V ++ L L S
Sbjct: 234 LAEASVMTQLRHSNLVQLLGVI-------VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 286
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
+ K + + Y+ N +HRD+ A NVL+++ + K++DFGL +
Sbjct: 287 GGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK--------- 337
Query: 129 VNRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT--RSP 174
+ + W PE L ++ + D+W G ++ E+++ R P
Sbjct: 338 -EASSTQDTGKLPVKWT-APEALR-EKKFSTKSDVWSFGILLWEIYSFGRVP 386
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 77.4 bits (191), Expect = 7e-16
Identities = 32/167 (19%), Positives = 61/167 (36%), Gaps = 21/167 (12%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
+ + L H ++V L+ +C S+ LV + L +
Sbjct: 63 TDHMLAIGSLDHAHIVRLLGLCP---------GSSLQLVTQYLPLGSLLDHVRQHRGALG 113
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
+ Q+ G+YY+ + ++HR++ A NVL+ +++ADFG+A
Sbjct: 114 PQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD----- 168
Query: 130 NRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTR 172
++ W E + Y D+W G + E+ T
Sbjct: 169 DKQLLYSEAKTPIKWM-ALESIH-FGKYTHQSDVWSYGVTVWELMTF 213
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 76.8 bits (190), Expect = 8e-16
Identities = 63/276 (22%), Positives = 101/276 (36%), Gaps = 82/276 (29%)
Query: 13 EIKILQLLKHENVVHLIEICRTKANQYNRYRSTF------YLVFDFCEH-DL------AG 59
E IL+ +KH +V L F YL+ ++ +L G
Sbjct: 71 ERNILEEVKHPFIVDL--------------IYAFQTGGKLYLILEYLSGGELFMQLEREG 116
Query: 60 LLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLAR 119
+ F L EI L ++H I++RD+K N+++ G +KL DFGL +
Sbjct: 117 IFMEDTACFYLAEI-------SMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
Query: 120 AFSQTKNGQVNRYTNRVV-TLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQG 178
++ T+ T+ Y PE+L+ + VD W G +M +M T +P G
Sbjct: 170 -----ESIHDGTVTHTFCGTIEYMAPEILMR-SGHNRAVDWWSLGALMYDMLTGAPPFTG 223
Query: 179 NTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDL 238
++ I I L K+ LP ++ + DL
Sbjct: 224 ENRKKTIDKI-------------------LKCKLNLPPYLTQEAR-------------DL 251
Query: 239 LDKLLLLDPSKRF-----DSDAALNHDFF----WTD 265
L KLL + + R D+ H FF W +
Sbjct: 252 LKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEE 287
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 76.5 bits (189), Expect = 9e-16
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
L E I++ H NV+ L+ IC R + +V + +H DL + N +
Sbjct: 74 LTEGIIMKDFSHPNVLSLLGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 126
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLAR 119
+ ++ Q+ G+ Y+ S K +HRD+ A N ++ + +K+ADFGLAR
Sbjct: 127 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 76.2 bits (188), Expect = 1e-15
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
LRE +++ L H NV+ LI I +++ + H DL + + +
Sbjct: 70 LREGLLMRGLNHPNVLALIGIM-------LPPEGLPHVLLPYMCHGDLLQFIRSPQRNPT 122
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLAR 119
+ ++ Q+ G+ Y+ K +HRD+ A N ++ ++ +K+ADFGLAR
Sbjct: 123 VKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLAR 172
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 76.9 bits (190), Expect = 1e-15
Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 57/237 (24%)
Query: 47 YLVFDFCEH-DL------AGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKA 99
+L+ D+ +L + V+ +GEI + L ++H I++RD+K
Sbjct: 135 HLILDYINGGELFTHLSQRERFTEHEVQIYVGEI-------VLALEHLHKLGIIYRDIKL 187
Query: 100 ANVLITKTGILKLADFGLARAFSQTKNGQVNRYTNRVV-TLWYRPPELLLGDRN-YGPPV 157
N+L+ G + L DFGL++ F + + T+ Y P+++ G + + V
Sbjct: 188 ENILLDSNGHVVLTDFGLSKEFVADETER----AYDFCGTIEYMAPDIVRGGDSGHDKAV 243
Query: 158 DLWGAGCIMAEMWTRSPIMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKA 217
D W G +M E+ T + + E+ IS+ I L ++ P+
Sbjct: 244 DWWSLGVLMYELLTGASPFTVDGEKNSQAEISR---RI------------LKSEPPYPQE 288
Query: 218 QKRKVKERLKPYVKDQYGCDLLDKLLLLDPSKRF-----DSDAALNHDFF----WTD 265
K DL+ +LL+ DP KR D+D H FF W D
Sbjct: 289 MSALAK-------------DLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDD 332
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 76.2 bits (188), Expect = 2e-15
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 21/167 (12%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
L E ++ + + +V L+ IC T ST L+ L +
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLT---------STVQLITQLMPFGCLLDYVREHKDNIG 115
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
+ Q+ G+ Y+ +++HRD+ A NVL+ +K+ DFGLA+ +
Sbjct: 116 SQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK--- 172
Query: 130 NRYTNRVVTL----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTR 172
+ W E +L R Y D+W G + E+ T
Sbjct: 173 --EYHAEGGKVPIKWM-ALESIL-HRIYTHQSDVWSYGVTVWELMTF 215
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 75.4 bits (186), Expect = 2e-15
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL-----SNI 64
LRE ++ H +V L+ + + ++ ++ F +H DL L
Sbjct: 73 LREAACMKEFDHPHVAKLVGVS-LR-SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGEN 130
Query: 65 HVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLAR 119
L + + + + G+ Y+ S +HRD+ A N ++ + + +ADFGL+R
Sbjct: 131 PFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 75.5 bits (186), Expect = 3e-15
Identities = 33/189 (17%), Positives = 71/189 (37%), Gaps = 24/189 (12%)
Query: 11 LREIKIL-QLLKHENVVHLIEICRTKANQYNRY--RSTFYLVFDFCEHDLAGLLSNIHVK 67
L ++ ++ + +V + + + ++ + L +
Sbjct: 71 LMDLDVVLKSHDCPYIVQC----------FGTFITNTDVFIAMELMGTCAEKLKKRMQGP 120
Query: 68 FSLGEIKKVIQQLLNGLYYIHS-NKILHRDMKAANVLITKTGILKLADFGLARAFSQTKN 126
+ K+ ++ LYY+ + ++HRD+K +N+L+ + G +KL DFG++ K
Sbjct: 121 IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180
Query: 127 GQVNRYTNRVVTLWYRPPE----LLLGDRNYGPPVDLWGAGCIMAEMWT-RSPIMQGNTE 181
Y PE +Y D+W G + E+ T + P T+
Sbjct: 181 K-----DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD 235
Query: 182 QQQITLISQ 190
+ +T + Q
Sbjct: 236 FEVLTKVLQ 244
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 75.6 bits (186), Expect = 4e-15
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
L E I++ H NV+ L+ IC R + +V + +H DL + N +
Sbjct: 138 LTEGIIMKDFSHPNVLSLLGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 190
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLAR 119
+ ++ Q+ G+ ++ S K +HRD+ A N ++ + +K+ADFGLAR
Sbjct: 191 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 74.9 bits (185), Expect = 4e-15
Identities = 59/276 (21%), Positives = 95/276 (34%), Gaps = 82/276 (29%)
Query: 13 EIKILQLLKHENVVHLIEICRTKANQYNRYRSTF------YLVFDFCEH-DL------AG 59
E ++LQ +H + L + F V ++ +L
Sbjct: 55 ESRVLQNTRHPFLTAL--------------KYAFQTHDRLCFVMEYANGGELFFHLSRER 100
Query: 60 LLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLAR 119
+ + +F EI ++ L Y+HS +++RD+K N+++ K G +K+ DFGL +
Sbjct: 101 VFTEERARFYGAEI-------VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
Query: 120 AFSQTKNGQVNRYTNRVV-TLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQG 178
T Y PE+L +YG VD WG G +M EM
Sbjct: 154 E-----GISDGATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
Query: 179 NTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGCDL 238
++ LI L ++ P+ + K L
Sbjct: 208 QDHERLFELI-------------------LMEEIRFPRTLSPEAK-------------SL 235
Query: 239 LDKLLLLDPSKRF-----DSDAALNHDFF----WTD 265
L LL DP +R D+ + H FF W D
Sbjct: 236 LAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQD 271
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 75.0 bits (185), Expect = 5e-15
Identities = 51/236 (21%), Positives = 80/236 (33%), Gaps = 62/236 (26%)
Query: 47 YLVFDFCEH-DL------AGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKA 99
Y V ++ DL G H F EI GL+++ S I++RD+K
Sbjct: 97 YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI-------AIGLFFLQSKGIIYRDLKL 149
Query: 100 ANVLITKTGILKLADFGLARAFSQTKNGQVNRYTNRVV-TLWYRPPELLLGDRNYGPPVD 158
NV++ G +K+ADFG+ + N T T Y PE++ + YG VD
Sbjct: 150 DNVMLDSEGHIKIADFGMCKE-----NIWDGVTTKTFCGTPDYIAPEIIAY-QPYGKSVD 203
Query: 159 LWGAGCIMAEMWTRSPIMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQ 218
W G ++ EM +G E + I + + + PK+
Sbjct: 204 WWAFGVLLYEMLAGQAPFEGEDEDELFQSI-------------------MEHNVAYPKSM 244
Query: 219 KRKVKERLKPYVKDQYGCDLLDKLLLLDPSKRF-----DSDAALNHDFF----WTD 265
++ + L+ P KR H FF W
Sbjct: 245 SKEAV-------------AICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEK 287
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 74.2 bits (183), Expect = 7e-15
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL-----SNI 64
L E ++ H NV+ L+ +C + + + ++ F ++ DL L
Sbjct: 84 LSEAACMKDFSHPNVIRLLGVC-IEMSS--QGIPKPMVILPFMKYGDLHTYLLYSRLETG 140
Query: 65 HVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLAR 119
L + K + + G+ Y+ + LHRD+ A N ++ + +ADFGL++
Sbjct: 141 PKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 74.2 bits (183), Expect = 9e-15
Identities = 55/235 (23%), Positives = 80/235 (34%), Gaps = 61/235 (25%)
Query: 47 YLVFDFCEH-DL------AGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKA 99
Y V D+ +L +F EI + L Y+HS I++RD+K
Sbjct: 115 YFVLDYINGGELFYHLQRERCFLEPRARFYAAEI-------ASALGYLHSLNIVYRDLKP 167
Query: 100 ANVLITKTGILKLADFGLARAFSQTKNGQVNRYTNRVV-TLWYRPPELLLGDRNYGPPVD 158
N+L+ G + L DFGL + N + N T+ T Y PE+L + Y VD
Sbjct: 168 ENILLDSQGHIVLTDFGLCKE-----NIEHNSTTSTFCGTPEYLAPEVLHK-QPYDRTVD 221
Query: 159 LWGAGCIMAEMWTRSPIMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQ 218
W G ++ EM P + I L ++L
Sbjct: 222 WWCLGAVLYEMLYGLPPFYSRNTAEMYDNI-------------------LNKPLQLKPNI 262
Query: 219 KRKVKERLKPYVKDQYGCDLLDKLLLLDPSKRF----DSDAALNHDFF----WTD 265
+ LL+ LL D +KR D +H FF W D
Sbjct: 263 TNSAR-------------HLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDD 304
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 75.1 bits (184), Expect = 1e-14
Identities = 51/237 (21%), Positives = 81/237 (34%), Gaps = 64/237 (27%)
Query: 47 YLVFDFCEH-DL------AGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKA 99
Y V ++ DL G H F EI GL+++ S I++RD+K
Sbjct: 418 YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI-------AIGLFFLQSKGIIYRDLKL 470
Query: 100 ANVLITKTGILKLADFGLARAFSQTKNGQVNRYTNRVV--TLWYRPPELLLGDRNYGPPV 157
NV++ G +K+ADFG+ K + T + T Y PE++ + YG V
Sbjct: 471 DNVMLDSEGHIKIADFGMC------KENIWDGVTTKTFCGTPDYIAPEIIAY-QPYGKSV 523
Query: 158 DLWGAGCIMAEMWTRSPIMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKA 217
D W G ++ EM +G E + I + + + PK+
Sbjct: 524 DWWAFGVLLYEMLAGQAPFEGEDEDELFQSI-------------------MEHNVAYPKS 564
Query: 218 QKRKVKERLKPYVKDQYGCDLLDKLLLLDPSKRF-----DSDAALNHDFF----WTD 265
++ + L+ P KR H FF W
Sbjct: 565 MSKEAV-------------AICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEK 608
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 73.5 bits (181), Expect = 1e-14
Identities = 24/119 (20%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL-------- 61
L E +++ +VV L+ + ++ ++ + DL L
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVV-SQGQP-------TLVIMELMTRGDLKSYLRSLRPAMA 127
Query: 62 -SNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLAR 119
+ + SL ++ ++ ++ +G+ Y+++NK +HRD+ A N ++ + +K+ DFG+ R
Sbjct: 128 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 72.7 bits (179), Expect = 1e-14
Identities = 39/189 (20%), Positives = 71/189 (37%), Gaps = 26/189 (13%)
Query: 11 LREIKI-LQLLKHENVVHLIEICRTKANQYNRY--RSTFYLVFDFCEHDLAGLLSNIHVK 67
L ++ I ++ + V Y ++ + + L + K
Sbjct: 53 LMDLDISMRTVDCPFTVTF----------YGALFREGDVWICMELMDTSLDKFYKQVIDK 102
Query: 68 ---FSLGEIKKVIQQLLNGLYYIHSN-KILHRDMKAANVLITKTGILKLADFGLARAFSQ 123
+ K+ ++ L ++HS ++HRD+K +NVLI G +K+ DFG++
Sbjct: 103 GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162
Query: 124 TKNGQVNRYTNRVVTLWYRPPELLLGDRN---YGPPVDLWGAGCIMAEMWT-RSPIMQGN 179
V + + Y PE + + N Y D+W G M E+ R P
Sbjct: 163 D----VAKDID-AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG 217
Query: 180 TEQQQITLI 188
T QQ+ +
Sbjct: 218 TPFQQLKQV 226
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 73.4 bits (181), Expect = 2e-14
Identities = 55/225 (24%), Positives = 86/225 (38%), Gaps = 54/225 (24%)
Query: 47 YLVFDFCEH-DL------AGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKA 99
+ V ++ DL F EI + GL ++HS I++RD+K
Sbjct: 94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI-------ILGLQFLHSKGIVYRDLKL 146
Query: 100 ANVLITKTGILKLADFGLARAFSQTKNGQVNRYTNRVV-TLWYRPPELLLGDRNYGPPVD 158
N+L+ K G +K+ADFG+ + +N + TN T Y PE+LLG + Y VD
Sbjct: 147 DNILLDKDGHIKIADFGMCK-----ENMLGDAKTNTFCGTPDYIAPEILLG-QKYNHSVD 200
Query: 159 LWGAGCIMAEMWTRSPIMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQ 218
W G ++ EM G E++ I + P+
Sbjct: 201 WWSFGVLLYEMLIGQSPFHGQDEEELFHSI-------------------RMDNPFYPRWL 241
Query: 219 KRKVKERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAAL-NHDFF 262
+++ K DLL KL + +P KR + H F
Sbjct: 242 EKEAK-------------DLLVKLFVREPEKRLGVRGDIRQHPLF 273
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 73.0 bits (178), Expect = 2e-14
Identities = 43/270 (15%), Positives = 78/270 (28%), Gaps = 43/270 (15%)
Query: 8 ITALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTF-----YLVFDFCEHDLAGLLS 62
L + +Q ++ + + N F ++V +F + L
Sbjct: 94 FIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGID-LEQ 152
Query: 63 NIHVKFSLGEIKKVIQQLLNGLYYIHSN-KILHRDMKAANVLITKTGILKLADFGLARAF 121
SL K ++ QL L ++ + HRD+ NVL+ KT + KL ++
Sbjct: 153 MRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSS 212
Query: 122 SQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTE 181
+ G L + +Y + ++ + G+ +
Sbjct: 213 TIPSCG------------------LQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDGD 254
Query: 182 QQQITLISQLCGSITPESWPGVETL-------DLYNKMELPKAQKRKVKERLKPYVKDQY 234
Q I +L W L +KM K K +K +
Sbjct: 255 YQFD--IYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKI 312
Query: 235 GCDLLDKLLLLDPSKRFDS--DAALNHDFF 262
+ +L F S D H F
Sbjct: 313 -QEFHRTML------NFSSATDLLCQHSLF 335
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 73.2 bits (180), Expect = 3e-14
Identities = 63/271 (23%), Positives = 100/271 (36%), Gaps = 81/271 (29%)
Query: 13 EIKILQLLKHENVVHLIEICRTKANQYNRYRSTF------YLVFDFCEH-DL------AG 59
E ++LQ +H + L + +F V ++ +L
Sbjct: 198 ENRVLQNSRHPFLTAL--------------KYSFQTHDRLCFVMEYANGGELFFHLSRER 243
Query: 60 LLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNK-ILHRDMKAANVLITKTGILKLADFGLA 118
+ S +F EI ++ L Y+HS K +++RD+K N+++ K G +K+ DFGL
Sbjct: 244 VFSEDRARFYGAEI-------VSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC 296
Query: 119 RAFSQTKNGQVNRYTNRVV--TLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIM 176
K G + T + T Y PE+L D +YG VD WG G +M EM
Sbjct: 297 ------KEGIKDGATMKTFCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPF 349
Query: 177 QGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQYGC 236
++ LI L ++ P+ + K
Sbjct: 350 YNQDHEKLFELI-------------------LMEEIRFPRTLGPEAK------------- 377
Query: 237 DLLDKLLLLDPSKRF-----DSDAALNHDFF 262
LL LL DP +R D+ + H FF
Sbjct: 378 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 72.0 bits (177), Expect = 4e-14
Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 32/192 (16%)
Query: 11 LREIKI-LQLLKHENVVHLIEICRTKANQYNRYRSTF-----YLVFDFCEHDLAGLLSNI 64
L ++ I ++ + V + Y + F ++ + + L +
Sbjct: 97 LMDLDISMRTVDCPFTV-----------TF--YGALFREGDVWICMELMDTSLDKFYKQV 143
Query: 65 HVK---FSLGEIKKVIQQLLNGLYYIHSN-KILHRDMKAANVLITKTGILKLADFGLARA 120
K + K+ ++ L ++HS ++HRD+K +NVLI G +K+ DFG++
Sbjct: 144 IDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGY 203
Query: 121 FSQTKNGQVNRYTNRVVTLWYRPPELLLGDRN---YGPPVDLWGAGCIMAEMWT-RSPIM 176
+ T Y PE + + N Y D+W G M E+ R P
Sbjct: 204 LVDSV-----AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258
Query: 177 QGNTEQQQITLI 188
T QQ+ +
Sbjct: 259 SWGTPFQQLKQV 270
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 71.9 bits (177), Expect = 6e-14
Identities = 49/237 (20%), Positives = 74/237 (31%), Gaps = 63/237 (26%)
Query: 47 YLVFDFCEH-DL------AGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKA 99
+ V +F DL + +F EI ++ L ++H I++RD+K
Sbjct: 100 FFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEI-------ISALMFLHDKGIIYRDLKL 152
Query: 100 ANVLITKTGILKLADFGLARAFSQTKNGQVNRYTNRVV-TLWYRPPELLLGDRNYGPPVD 158
NVL+ G KLADFG+ + T T Y PE+L YGP VD
Sbjct: 153 DNVLLDHEGHCKLADFGMCKE-----GICNGVTTATFCGTPDYIAPEILQE-MLYGPAVD 206
Query: 159 LWGAGCIMAEMWTRSPIMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQ 218
W G ++ EM + E I L +++ P
Sbjct: 207 WWAMGVLLYEMLCGHAPFEAENEDDLFEAI-------------------LNDEVVYPTWL 247
Query: 219 KRKVKERLKPYVKDQYGCDLLDKLLLLDPSKRF---DSDAAL---NHDFF----WTD 265
+L + +P+ R H FF W
Sbjct: 248 HEDAT-------------GILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQ 291
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 70.4 bits (173), Expect = 8e-14
Identities = 32/170 (18%), Positives = 66/170 (38%), Gaps = 25/170 (14%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKFS 69
++ L H+++V +C + LV +F + L L +
Sbjct: 60 FEAASMMSKLSHKHLVLNYGVC-VCGD-------ENILVQEFVKFGSLDTYLKKNKNCIN 111
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTG--------ILKLADFGLARAF 121
+ +V +QL ++++ N ++H ++ A N+L+ + +KL+D G++
Sbjct: 112 ILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 122 SQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWT 171
Q R+ W PPE + +N D W G + E+ +
Sbjct: 172 LPKDILQE-----RIP--WV-PPECIENPKNLNLATDKWSFGTTLWEICS 213
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 70.8 bits (174), Expect = 1e-13
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 24/126 (19%)
Query: 11 LREIKIL-QLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKF 68
+ E+KIL + H NVV+L+ C TK ++ +FC+ +L+ L + +F
Sbjct: 78 MSELKILIHIGHHLNVVNLLGAC-TKPGGP------LMVIVEFCKFGNLSTYLRSKRNEF 130
Query: 69 SLGEIKKV--------IQQLL-------NGLYYIHSNKILHRDMKAANVLITKTGILKLA 113
++ ++ L+ G+ ++ S K +HRD+ A N+L+++ ++K+
Sbjct: 131 VPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 114 DFGLAR 119
DFGLAR
Sbjct: 191 DFGLAR 196
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 70.7 bits (174), Expect = 1e-13
Identities = 58/246 (23%), Positives = 84/246 (34%), Gaps = 72/246 (29%)
Query: 47 YLVFDFCEH-DL------AGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKA 99
+ V ++ DL L H +F EI L Y+H I++RD+K
Sbjct: 86 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI-------SLALNYLHERGIIYRDLKL 138
Query: 100 ANVLITKTGILKLADFGLARAFSQTKNGQVNRYTNRVV-TLWYRPPELLLGDRNYGPPVD 158
NVL+ G +KL D+G+ + + T+ T Y PE+L G +YG VD
Sbjct: 139 DNVLLDSEGHIKLTDYGMCKE-----GLRPGDTTSTFCGTPNYIAPEILRG-EDYGFSVD 192
Query: 159 LWGAGCIMAEMWT-RSP--------IMQGNTEQQQITLISQLCGSITPESWPGVETLDLY 209
W G +M EM RSP NTE +I L
Sbjct: 193 WWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI-------------------LE 233
Query: 210 NKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLLDPSKRF------DSDAALNHDFF- 262
++ +P++ K +L L DP +R H FF
Sbjct: 234 KQIRIPRSLSVKAA-------------SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280
Query: 263 ---WTD 265
W
Sbjct: 281 NVDWDM 286
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 70.0 bits (172), Expect = 2e-13
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 24/125 (19%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL-------- 61
RE ++L L+HE++V +C + +VF++ +H DL L
Sbjct: 65 QREAELLTNLQHEHIVKFYGVC-GDGDP-------LIMVFEYMKHGDLNKFLRAHGPDAM 116
Query: 62 -------SNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLAD 114
+ L ++ + Q+ +G+ Y+ S +HRD+ N L+ ++K+ D
Sbjct: 117 ILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGD 176
Query: 115 FGLAR 119
FG++R
Sbjct: 177 FGMSR 181
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 70.0 bits (172), Expect = 2e-13
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 23/124 (18%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL-------- 61
RE ++L +L+H+++V +C T+ +VF++ H DL L
Sbjct: 91 QREAELLTMLQHQHIVRFFGVC-TEGRPL-------LMVFEYMRHGDLNRFLRSHGPDAK 142
Query: 62 ------SNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADF 115
LG++ V Q+ G+ Y+ +HRD+ N L+ + ++K+ DF
Sbjct: 143 LLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDF 202
Query: 116 GLAR 119
G++R
Sbjct: 203 GMSR 206
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 69.2 bits (170), Expect = 2e-13
Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 24/125 (19%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL-------- 61
E + L+H NVV L+ + TK ++F +C H DL L
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVV-TKDQP-------LSMIFSYCSHGDLHEFLVMRSPHSD 111
Query: 62 -------SNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLAD 114
+ + ++ Q+ G+ Y+ S+ ++H+D+ NVL+ +K++D
Sbjct: 112 VGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISD 171
Query: 115 FGLAR 119
GL R
Sbjct: 172 LGLFR 176
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 70.1 bits (172), Expect = 2e-13
Identities = 58/246 (23%), Positives = 84/246 (34%), Gaps = 72/246 (29%)
Query: 47 YLVFDFCEH-DL------AGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKA 99
+ V ++ DL L H +F EI L Y+H I++RD+K
Sbjct: 129 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI-------SLALNYLHERGIIYRDLKL 181
Query: 100 ANVLITKTGILKLADFGLARAFSQTKNGQVNRYTNRVV-TLWYRPPELLLGDRNYGPPVD 158
NVL+ G +KL D+G+ + + T+ T Y PE+L G +YG VD
Sbjct: 182 DNVLLDSEGHIKLTDYGMCKE-----GLRPGDTTSTFCGTPNYIAPEILRG-EDYGFSVD 235
Query: 159 LWGAGCIMAEMWT-RSP--------IMQGNTEQQQITLISQLCGSITPESWPGVETLDLY 209
W G +M EM RSP NTE +I L
Sbjct: 236 WWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI-------------------LE 276
Query: 210 NKMELPKAQKRKVKERLKPYVKDQYGCDLLDKLLLLDPSKRF------DSDAALNHDFF- 262
++ +P++ K +L L DP +R H FF
Sbjct: 277 KQIRIPRSLSVKAA-------------SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323
Query: 263 ---WTD 265
W
Sbjct: 324 NVDWDM 329
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 68.1 bits (167), Expect = 8e-13
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 23/124 (18%)
Query: 11 LREIKIL-QLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DL----------- 57
+ E+KI+ L +HEN+V+L+ C T ++ ++C + DL
Sbjct: 97 MSELKIMSHLGQHENIVNLLGAC-THGGP-------VLVITEYCCYGDLLNFLRRKSRVL 148
Query: 58 --AGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADF 115
+ + S ++ Q+ G+ ++ S +HRD+ A NVL+T + K+ DF
Sbjct: 149 ETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDF 208
Query: 116 GLAR 119
GLAR
Sbjct: 209 GLAR 212
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 68.0 bits (167), Expect = 8e-13
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 27/128 (21%)
Query: 11 LREIKIL-QLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DL---------AG 59
+ E+K+L L H N+V+L+ C T ++ ++C + DL +
Sbjct: 74 MSELKVLSYLGNHMNIVNLLGAC-TI-------GGPTLVITEYCCYGDLLNFLRRKRDSF 125
Query: 60 LLSNIHVKFSLGEIKKV-IQQLL-------NGLYYIHSNKILHRDMKAANVLITKTGILK 111
+ S + + ++ LL G+ ++ S +HRD+ A N+L+T I K
Sbjct: 126 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK 185
Query: 112 LADFGLAR 119
+ DFGLAR
Sbjct: 186 ICDFGLAR 193
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 67.6 bits (166), Expect = 1e-12
Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 32/133 (24%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DL------------ 57
L E +L+ + H +V+ L C ++ L+ ++ ++ L
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGAC-SQ-------DGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 58 ---AGLLSNIHVKFSLGEIKKV-IQQLL-------NGLYYIHSNKILHRDMKAANVLITK 106
S + + + + L+ G+ Y+ K++HRD+ A N+L+ +
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAE 185
Query: 107 TGILKLADFGLAR 119
+K++DFGL+R
Sbjct: 186 GRKMKISDFGLSR 198
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 67.3 bits (165), Expect = 2e-12
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 18/119 (15%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL------SN 63
L E I+ H+N+V I + ++ +++ + DL L +
Sbjct: 81 LMEALIISKFNHQNIVRCIGVS-LQSLPR-------FILMELMAGGDLKSFLRETRPRPS 132
Query: 64 IHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTG---ILKLADFGLAR 119
++ ++ V + + G Y+ N +HRD+ A N L+T G + K+ DFG+AR
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 67.4 bits (165), Expect = 2e-12
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 18/119 (15%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL------SN 63
L E I+ H+N+V I + ++ +++ + DL L +
Sbjct: 122 LMEALIISKFNHQNIVRCIGVS-LQSL-------PRFILLELMAGGDLKSFLRETRPRPS 173
Query: 64 IHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTG---ILKLADFGLAR 119
++ ++ V + + G Y+ N +HRD+ A N L+T G + K+ DFG+AR
Sbjct: 174 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 66.9 bits (164), Expect = 2e-12
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 25/126 (19%)
Query: 11 LREIKIL-QLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL------- 61
+ E++++ + KH+N+++L+ C T+ Y++ ++ +L L
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGAC-TQDGP-------LYVIVEYASKGNLREYLRARRPPG 139
Query: 62 -SNIHVKFSLGEIKKVIQQLL-------NGLYYIHSNKILHRDMKAANVLITKTGILKLA 113
+ + E + + L+ G+ Y+ S K +HRD+ A NVL+T+ ++K+A
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199
Query: 114 DFGLAR 119
DFGLAR
Sbjct: 200 DFGLAR 205
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 66.5 bits (163), Expect = 3e-12
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 25/126 (19%)
Query: 11 LREIKIL-QLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKF 68
E+++L +L H N+++L+ C R YL ++ H +L L V
Sbjct: 73 AGELEVLCKLGHHPNIINLLGAC-EH-------RGYLYLAIEYAPHGNLLDFLRKSRVLE 124
Query: 69 SLGEIKKV--------IQQLL-------NGLYYIHSNKILHRDMKAANVLITKTGILKLA 113
+ QQLL G+ Y+ + +HRD+ A N+L+ + + K+A
Sbjct: 125 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 184
Query: 114 DFGLAR 119
DFGL+R
Sbjct: 185 DFGLSR 190
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 66.6 bits (163), Expect = 3e-12
Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 25/126 (19%)
Query: 11 LREIKIL-QLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DL----------- 57
+ E++++ + KH+N+++L+ C T+ Y++ ++ +L
Sbjct: 134 VSEMEMMKMIGKHKNIINLLGAC-TQ-------DGPLYVIVEYASKGNLREYLRARRPPG 185
Query: 58 ----AGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLA 113
+ + + ++ QL G+ Y+ S K +HRD+ A NVL+T+ ++K+A
Sbjct: 186 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 245
Query: 114 DFGLAR 119
DFGLAR
Sbjct: 246 DFGLAR 251
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 66.2 bits (162), Expect = 3e-12
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 32/133 (24%)
Query: 11 LREIKIL-QLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLLSNIHVKF 68
+ E+K++ QL HEN+V+L+ C T + YL+F++C + DL L + KF
Sbjct: 96 MSELKMMTQLGSHENIVNLLGAC-TLSGP-------IYLIFEYCCYGDLLNYLRSKREKF 147
Query: 69 SLGEIKKV---------------IQQLL-------NGLYYIHSNKILHRDMKAANVLITK 106
S EI+ + LL G+ ++ +HRD+ A NVL+T
Sbjct: 148 SEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH 207
Query: 107 TGILKLADFGLAR 119
++K+ DFGLAR
Sbjct: 208 GKVVKICDFGLAR 220
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 65.8 bits (161), Expect = 5e-12
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 32/133 (24%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DLAGLL-------- 61
RE ++ + N+V L+ +C L+F++ + DL L
Sbjct: 98 QREAALMAEFDNPNIVKLLGVC-AVGKP-------MCLLFEYMAYGDLNEFLRSMSPHTV 149
Query: 62 ---------------SNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITK 106
S S E + +Q+ G+ Y+ K +HRD+ N L+ +
Sbjct: 150 CSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGE 209
Query: 107 TGILKLADFGLAR 119
++K+ADFGL+R
Sbjct: 210 NMVVKIADFGLSR 222
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 64.9 bits (159), Expect = 8e-12
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 15/143 (10%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHD-LAGLLSNIHVKFS 69
+EIK++ +HEN+V L+ LV+ + + L LS +
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSD--------GDDLCLVYVYMPNGSLLDRLSCLDGTPP 129
Query: 70 L--GEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNG 127
L K+ Q NG+ ++H N +HRD+K+AN+L+ + K++DFGLARA +
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 128 QVNRYTNRVV-TLWYRPPELLLG 149
+ T+R+V T Y PE L G
Sbjct: 190 VM---TSRIVGTTAYMAPEALRG 209
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 65.1 bits (159), Expect = 9e-12
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 25/126 (19%)
Query: 11 LREIKIL-QLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEH-DL----------- 57
+ E++++ + KH+N+++L+ C T+ Y++ ++ +L
Sbjct: 122 ISEMEMMKMIGKHKNIINLLGAC-TQ-------DGPLYVIVEYASKGNLREYLQARRPPG 173
Query: 58 ----AGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLA 113
N + S ++ Q+ G+ Y+ S K +HRD+ A NVL+T+ ++K+A
Sbjct: 174 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA 233
Query: 114 DFGLAR 119
DFGLAR
Sbjct: 234 DFGLAR 239
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 63.4 bits (155), Expect = 3e-11
Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 32/146 (21%)
Query: 13 EIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDF-----CEHDLAGLLSNIH-- 65
EI+ L +H ++V LI C + L++ + + L G
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMI--------LIYKYMENGNLKRHLYGSDLPTMSM 136
Query: 66 -----VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARA 120
++ +G + GL+Y+H+ I+HRD+K+ N+L+ + + K+ DFG+++
Sbjct: 137 SWEQRLEICIGAAR--------GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK 188
Query: 121 FSQTKNGQVNRYTNRVV-TLWYRPPE 145
++ + + V TL Y PE
Sbjct: 189 GTELDQTHL---STVVKGTLGYIDPE 211
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 63.2 bits (154), Expect = 3e-11
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 20/141 (14%)
Query: 11 LREIKILQLL-KHENVVHLIEICRTKA-------------NQYNRYRSTFYLVFDFCEHD 56
E+K Q + K + + IE + + YR ++V + D
Sbjct: 81 FSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYR---FMVMERLGID 137
Query: 57 LAGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLI--TKTGILKLAD 114
L + + F + ++ ++L+ L YIH N+ +H D+KAAN+L+ + LAD
Sbjct: 138 LQKIS-GQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLAD 196
Query: 115 FGLARAFSQTKNGQVNRYTNR 135
+GL+ + N + + R
Sbjct: 197 YGLSYRYCPNGNHKQYQENPR 217
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 62.0 bits (151), Expect = 6e-11
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 12/126 (9%)
Query: 11 LREIKILQLLKH-ENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHVKFS 69
E KI ++++ + + YN +V + L L + KFS
Sbjct: 52 HIESKIYKMMQGGVGIPTIRWCGAE--GDYN------VMVMELLGPSLEDLFNFCSRKFS 103
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLI---TKTGILKLADFGLARAFSQTKN 126
L + + Q+++ + YIHS +HRD+K N L+ K ++ + DFGLA+ + +
Sbjct: 104 LKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163
Query: 127 GQVNRY 132
Q Y
Sbjct: 164 HQHIPY 169
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 62.5 bits (152), Expect = 7e-11
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 37 NQYNRYRSTFYLVFDFCEHDLAGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRD 96
YR +++ D DL + +FS + ++ ++L+ L YIH ++ +H D
Sbjct: 121 KNGKSYR---FMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGD 177
Query: 97 MKAANVLI--TKTGILKLADFGLARAFSQTKNGQVNRYTNR 135
+KA+N+L+ + L D+GLA + + +
Sbjct: 178 IKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPK 218
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 59.5 bits (145), Expect = 5e-10
Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 24/145 (16%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHVKFSL 70
E++++ + H N++ L C T + LV+ + + + S + +
Sbjct: 75 QTEVEMISMAVHRNLLRLRGFCMTPTERL--------LVYPYMANG--SVASCLRERPES 124
Query: 71 GEI------KKVIQQLLNGLYYIH--SN-KILHRDMKAANVLITKTGILKLADFGLARAF 121
+++ GL Y+H + KI+HRD+KAAN+L+ + + DFGLA+
Sbjct: 125 QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184
Query: 122 SQTKNGQVNRYTNRVV-TLWYRPPE 145
T V T+ + PE
Sbjct: 185 DYKDTH----VTTAVRGTIGHIAPE 205
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 59.8 bits (145), Expect = 5e-10
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 10/118 (8%)
Query: 11 LREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHVK-FS 69
+ + K L + + ++Y +LV L L S
Sbjct: 105 VNKWKKLYSTPLLAIPTCMG-FGVHQDKYR------FLVLPSLGRSLQSALDVSPKHVLS 157
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLI--TKTGILKLADFGLARAFSQTK 125
+ +V +LL+ L ++H N+ +H ++ A N+ + + LA +G A + +
Sbjct: 158 ERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSG 215
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 57.8 bits (140), Expect = 2e-09
Identities = 25/123 (20%), Positives = 50/123 (40%), Gaps = 14/123 (11%)
Query: 12 REIKILQLLKH-ENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHVKFSL 70
E + + L + + + +YN +V + L L FSL
Sbjct: 53 LEYRFYKQLGSGDGIPQVYYFGPC--GKYN------AMVLELLGPSLEDLFDLCDRTFSL 104
Query: 71 GEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLI-----TKTGILKLADFGLARAFSQTK 125
+ + QL++ + Y+HS +++RD+K N LI ++ + DF LA+ + +
Sbjct: 105 KTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164
Query: 126 NGQ 128
+
Sbjct: 165 TKK 167
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 57.4 bits (139), Expect = 2e-09
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 14/124 (11%)
Query: 11 LREIKILQLLKH-ENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHVKFS 69
E + +LL + ++ + +N LV D L LL KFS
Sbjct: 53 RDEYRTYKLLAGCTGIPNVYYFGQE--GLHN------VLVIDLLGPSLEDLLDLCGRKFS 104
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLI-----TKTGILKLADFGLARAFSQT 124
+ + +Q+L + IH +++RD+K N LI ++ + DFG+ + +
Sbjct: 105 VKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164
Query: 125 KNGQ 128
Q
Sbjct: 165 VTKQ 168
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 57.7 bits (139), Expect = 3e-09
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 12/129 (9%)
Query: 11 LREIKILQLLK-HENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHVKFS 69
L E KI ++L+ + ++ YN LV D L L + K S
Sbjct: 50 LYESKIYRILQGGTGIPNVRWFGVE--GDYN------VLVMDLLGPSLEDLFNFCSRKLS 101
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLI---TKTGILKLADFGLARAFSQTKN 126
L + + Q++N + ++HS LHRD+K N L+ + + + DFGLA+ + T
Sbjct: 102 LKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161
Query: 127 GQVNRYTNR 135
Q Y
Sbjct: 162 HQHIPYREN 170
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 55.1 bits (133), Expect = 1e-08
Identities = 19/182 (10%), Positives = 43/182 (23%), Gaps = 44/182 (24%)
Query: 10 ALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVFDFCE-HDLAGLLSNIHVKF 68
L L + V ++++ R+ +V ++ L +
Sbjct: 78 TLSRTLRLSRIDKPGVARVLDVVH--------TRAGGLVVAEWIRGGSLQEVADT---SP 126
Query: 69 SLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQ 128
S + +Q L H + + V ++ G + LA
Sbjct: 127 SPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA------------ 174
Query: 129 VNRYTNRVVTLWYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRSPIMQGNTEQQQITLI 188
P P D+ G G + + + + +
Sbjct: 175 ------------TMPDA--------NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA 214
Query: 189 SQ 190
+
Sbjct: 215 ER 216
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 55.7 bits (134), Expect = 1e-08
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 15/111 (13%)
Query: 79 QLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQVNRYTNRVVT 138
Q+ G+ ++ S K +HRD+ A N+L+++ ++K+ DFGLAR + + Y +
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-----YVRKGDA 255
Query: 139 L----WYRPPELLLGDRNYGPPVDLWGAGCIMAEMWTRS----PIMQGNTE 181
W PE + DR Y D+W G ++ E+++ P ++ + E
Sbjct: 256 RLPLKWM-APETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 304
Score = 29.5 bits (66), Expect = 2.2
Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 12/126 (9%)
Query: 11 LREIKILQLL-KHENVVHLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHVKFS 69
+ E+KIL + H NVV+L+ C + ++ +FC+ G LS +++
Sbjct: 73 MSELKILIHIGHHLNVVNLLGAC-------TKPGGPLMVIVEFCKF---GNLST-YLRSK 121
Query: 70 LGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKLADFGLARAFSQTKNGQV 129
E + + D+K IT + + F ++ S + +
Sbjct: 122 RNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 181
Query: 130 NRYTNR 135
+
Sbjct: 182 PEDLYK 187
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 42.0 bits (98), Expect = 4e-04
Identities = 61/374 (16%), Positives = 113/374 (30%), Gaps = 126/374 (33%)
Query: 9 TALREIKILQLLKHENVVHLIEICRTKANQYNRYRSTFYLVF-----DFCEHD----LAG 59
+ R + L H ++ H++ + ++ + F + F D A
Sbjct: 4 YSTRPL----TLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAE 59
Query: 60 LLSNIHVKFSLGEIKKVIQQLLNGLY--------------YIHSNKILHRDMKAANVLIT 105
L+ KF LG + +++ G + Y+ N I H AA +L
Sbjct: 60 LVG----KF-LGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDI-H--ALAAKLLQE 111
Query: 106 KTGILKLADFGLARAFSQTKNGQVNRYTNRVVTLWYRPPELLLGDRNYGPPVD--LW--- 160
L + L + + T R++ R + + L+
Sbjct: 112 NDTTL-VKTKELIKNY----------ITARIMA-----------KRPFDKKSNSALFRAV 149
Query: 161 --GAGCIMAEMWTRSPIM--QGNTEQQQITLISQLCGSITPESWPGVETLDLYNK-MELP 215
G ++A I QGNT+ + + E DLY L
Sbjct: 150 GEGNAQLVA-------IFGGQGNTD----------------DYFE--ELRDLYQTYHVLV 184
Query: 216 KAQKRKVKERLKPYVKD--------QYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDP- 266
+ E L ++ G ++L+ L +PS D D+ + P
Sbjct: 185 GDLIKFSAETLSELIRTTLDAEKVFTQGLNILE--WLENPSNTPDK------DYLLSIPI 236
Query: 267 -MPSDLSKMLAQHTQSMFEYLAPPR----RPGHMRAHHH---HHHAGAPGAAGPAAGRAT 318
P L Q + Y+ + PG +R++ H G A A
Sbjct: 237 SCP------LIGVIQ-LAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAE--TD 287
Query: 319 TETGYHDRVKERLK 332
+ + V++ +
Sbjct: 288 SWESFFVSVRKAIT 301
Score = 35.0 bits (80), Expect = 0.054
Identities = 46/258 (17%), Positives = 72/258 (27%), Gaps = 91/258 (35%)
Query: 116 GLARAFSQTKNGQVNRY--TNRVVTLWYRPPELLLGDRNY---GPPVDLWGAGCIMAEMW 170
L + Q + N + + V + L+ G +N GPP L+G
Sbjct: 343 NLTQEQVQDYVNKTNSHLPAGKQVEI-----SLVNGAKNLVVSGPPQSLYG--------- 388
Query: 171 TRSPIMQGNTEQQQITLISQLCGSITPESWPGVETLDLYNKMELPKAQKR-KVKERLKPY 229
L L + P G++ Q R ER K
Sbjct: 389 ----------------LNLTLRKAKAP---SGLD-------------QSRIPFSER-KLK 415
Query: 230 VKDQYGCDLLDKL---------LLLDPSKRFDSDAALNHDFFWTDP---MP-------SD 270
+++ L LL+ S + D ++ + +P SD
Sbjct: 416 FSNRF-------LPVASPFHSHLLVPASDLINKDLV-KNNVSFNAKDIQIPVYDTFDGSD 467
Query: 271 LSKMLAQHTQSMFEYLAPPRRPGHMRA--HHHHHHA---GAPGAA---GPAAGRATTETG 322
L + ++ + + + R P H G PG A G R TG
Sbjct: 468 LRVLSGSISERIVDCII--RLPVKWETTTQFKATHILDFG-PGGASGLGVLTHRNKDGTG 524
Query: 323 YHDRVKERLKPYVKDQYG 340
V L D YG
Sbjct: 525 VRVIVAGTLDINPDDDYG 542
Score = 31.6 bits (71), Expect = 0.74
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 206 LDLYNKMELPKAQKRKVKERLKPYVKDQYGCDLLD 240
+DLY A + V R + KD YG +LD
Sbjct: 1633 MDLYKTS--KAA--QDVWNRADNHFKDTYGFSILD 1663
Score = 28.5 bits (63), Expect = 5.8
Identities = 28/174 (16%), Positives = 49/174 (28%), Gaps = 71/174 (40%)
Query: 5 FFPITA------LREI--KILQLLKHENVVHLIEICRTKANQYNRYRSTFYL---VFD-F 52
F P+ + L I + L N + A + V+D F
Sbjct: 420 FLPVASPFHSHLLVPASDLINKDLVKNN----VSF---NAKD---------IQIPVYDTF 463
Query: 53 CEHDLAGLLSNIHVKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLITKTGILKL 112
DL L +I ++++ ++ L + T+ +
Sbjct: 464 DGSDLRVLSGSI--------SERIVDCIIR----------LPVKWETT----TQFKATHI 501
Query: 113 ADFG------LARAFSQTKNGQ-VNRYTNRVVTLWYRPPELLLGDRNYGPPVDL 159
DFG L + K+G V RV+ + G + P D
Sbjct: 502 LDFGPGGASGLGVLTHRNKDGTGV-----RVI---------VAGTLDINPDDDY 541
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 39.8 bits (92), Expect = 0.002
Identities = 19/84 (22%), Positives = 26/84 (30%), Gaps = 26/84 (30%)
Query: 298 HHHHHHAGAPGAAGPAAGRATTETG-----YHDRVKERLKPYVKDQYGC-DLLDKLLLLD 351
HHHHHH ETG Y D + +V + + C D+ D +
Sbjct: 1 HHHHHH-------------MDFETGEHQYQYKDILSVFEDAFVDN-FDCKDVQDMPKSIL 46
Query: 352 PSKRFDSDAALNHD------FFWT 369
+ D FWT
Sbjct: 47 SKEEIDHIIMSKDAVSGTLRLFWT 70
Score = 29.1 bits (64), Expect = 3.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 403 HHHHHH 408
HHHHHH
Sbjct: 1 HHHHHH 6
>2x12_A FAP1, fimbriae-associated protein FAP1; biofilm, cell WALL, cell
adhesion, peptidoglycan-anchor; 2.90A {Streptococcus
parasanguinis} PDB: 3rgu_A* 2kub_A
Length = 348
Score = 36.3 bits (83), Expect = 0.017
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTETGY---HDRVKERLKPYVKDQYGCDLLD-----KLL 348
+HHHHHH P +G A+G T G D V+E L + + ++L+ KL+
Sbjct: 4 SHHHHHHGLVPRGSGAASGNKATSKGTEEKQDSVRENLDKMISE---AEVLNDMAARKLI 60
Query: 349 LLDPSKRFD 357
LD ++ +
Sbjct: 61 TLDAEQQLE 69
Score = 34.0 bits (77), Expect = 0.091
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 402 AHHHHHHAGAPGAAGPAAGRATTETGYHDR 431
+HHHHHH P +G A+G T G ++
Sbjct: 4 SHHHHHHGLVPRGSGAASGNKATSKGTEEK 33
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 33.8 bits (76), Expect = 0.043
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 216 KAQKRKVKERLKPYVKD 232
K +K++ LK Y D
Sbjct: 19 KQALKKLQASLKLYADD 35
Score = 31.5 bits (70), Expect = 0.27
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 9/36 (25%)
Query: 181 EQQQITLISQLCGSI---TPESWPGVETLDLYNKME 213
E+Q + +L S+ +S P L + ME
Sbjct: 18 EKQAL---KKLQASLKLYADDSAPA---LAIKATME 47
Score = 31.5 bits (70), Expect = 0.28
Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
Query: 306 APGAAGPA-AGRATTE 320
A +A PA A +AT E
Sbjct: 33 ADDSA-PALAIKATME 47
Score = 31.5 bits (70), Expect = 0.28
Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
Query: 411 APGAAGPA-AGRATTE 425
A +A PA A +AT E
Sbjct: 33 ADDSA-PALAIKATME 47
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide
oxidoreductase, C(4A)-peroxyflavin, crystallography,
conformational dynamics; HET: FAD; 2.00A {Streptococcus
pyogenes} PDB: 2bcp_A* 2bc1_A*
Length = 490
Score = 33.3 bits (77), Expect = 0.14
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTETGYHDRVKERL 331
+HHHHHH A G GR + DR ++
Sbjct: 4 SHHHHHHGMASMTGGQQMGRTLYDDDDKDRWGSKI 38
Score = 31.8 bits (73), Expect = 0.44
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 402 AHHHHHHAGAPGAAGPAAGRATTETGYHDR 431
+HHHHHH A G GR + DR
Sbjct: 4 SHHHHHHGMASMTGGQQMGRTLYDDDDKDR 33
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, SCD,
NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Length = 301
Score = 32.7 bits (75), Expect = 0.18
Identities = 10/23 (43%), Positives = 10/23 (43%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATT 319
AHHHHHH G A G
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMDG 24
Score = 32.7 bits (75), Expect = 0.18
Identities = 10/23 (43%), Positives = 10/23 (43%)
Query: 402 AHHHHHHAGAPGAAGPAAGRATT 424
AHHHHHH G A G
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMDG 24
>2q83_A YTAA protein; 2635576, structural genomics, joint center for
structu genomics, JCSG, protein structure initiative,
PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus
subtilis}
Length = 346
Score = 31.9 bits (72), Expect = 0.37
Identities = 8/61 (13%), Positives = 22/61 (36%), Gaps = 6/61 (9%)
Query: 65 HVKFSLGEIKKVIQQLLNGLYYIHSNK------ILHRDMKAANVLITKTGILKLADFGLA 118
+ + + ++ +LL Y + + + H+D N L+ + + + D
Sbjct: 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTV 250
Query: 119 R 119
Sbjct: 251 S 251
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB:
3sdw_A 3qd5_A*
Length = 184
Score = 31.1 bits (71), Expect = 0.48
Identities = 17/63 (26%), Positives = 20/63 (31%), Gaps = 16/63 (25%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTET-------------GYHDRVKERLKPYVKDQ-YGCD 342
AHHHHHH G A G G KE LK ++ D
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMAATPLPPLRLAIACDDAGV--SYKEALKAHLSDNPLVSS 59
Query: 343 LLD 345
+ D
Sbjct: 60 ITD 62
Score = 28.4 bits (64), Expect = 3.7
Identities = 10/25 (40%), Positives = 10/25 (40%)
Query: 402 AHHHHHHAGAPGAAGPAAGRATTET 426
AHHHHHH G A G
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMAATP 26
>1uoz_A Putative cellulase; hydrolase, glycoside hydrolase, family 6; HET:
GLC SSG; 1.10A {Mycobacterium tuberculosis} SCOP:
c.6.1.1 PDB: 1up3_A* 1up0_A* 1up2_A*
Length = 315
Score = 31.2 bits (70), Expect = 0.70
Identities = 9/23 (39%), Positives = 11/23 (47%), Gaps = 1/23 (4%)
Query: 293 GHMRAHHHHHHAGAPGAAGPAAG 315
GH HHHHHH+ + G
Sbjct: 2 GHHHHHHHHHHS-SGHIEGRHMA 23
Score = 31.2 bits (70), Expect = 0.70
Identities = 9/23 (39%), Positives = 11/23 (47%), Gaps = 1/23 (4%)
Query: 398 GHMRAHHHHHHAGAPGAAGPAAG 420
GH HHHHHH+ + G
Sbjct: 2 GHHHHHHHHHHS-SGHIEGRHMA 23
>2fsu_A Protein PHNH; C-P lyase, phosphonate metabolism, structural
genomics montreal-kingston bacterial structural genomics
initiative; HET: MSE; 1.70A {Escherichia coli} SCOP:
c.67.2.1
Length = 210
Score = 30.6 bits (69), Expect = 0.74
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 6/34 (17%)
Query: 400 MRAHHHHHHAGAPGAAGPAAGRATTETGYHDRVF 433
MR HHHHH G+ + T ET + V
Sbjct: 1 MRGSHHHHHHGS------GSMGMTLETAFMLPVQ 28
Score = 29.5 bits (66), Expect = 1.8
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 6/35 (17%)
Query: 295 MRAHHHHHHAGAPGAAGPAAGRATTETGYHDRVKE 329
MR HHHHH G+ + T ET + V++
Sbjct: 1 MRGSHHHHHHGS------GSMGMTLETAFMLPVQD 29
>2fgg_A Hypothetical protein RV2632C/MT2708; TB target, structural
genomics, PSI, protein struct initiative, TB structural
genomics consortium; 2.30A {Mycobacterium tuberculosis}
SCOP: d.50.5.1
Length = 101
Score = 29.0 bits (65), Expect = 0.89
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 269 SDLSKMLAQHTQS-MFEYLAPPRRPGHMRAHHHHHH 303
SDL+ L T S + P H R+HHHHHH
Sbjct: 66 SDLANQLFALTSSDIEASTHQPVTGLHHRSHHHHHH 101
Score = 29.0 bits (65), Expect = 0.89
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 374 SDLSKMLAQHTQS-MFEYLAPPRRPGHMRAHHHHHH 408
SDL+ L T S + P H R+HHHHHH
Sbjct: 66 SDLANQLFALTSSDIEASTHQPVTGLHHRSHHHHHH 101
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu
genomics, seattle structural genomics center for
infectious lyase; 1.75A {Mycobacterium smegmatis} PDB:
3njb_A
Length = 333
Score = 30.5 bits (69), Expect = 0.98
Identities = 12/29 (41%), Positives = 12/29 (41%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTETGYHD 325
AHHHHHH G A G T D
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMTHAIRPVD 30
Score = 30.5 bits (69), Expect = 0.98
Identities = 12/29 (41%), Positives = 12/29 (41%)
Query: 402 AHHHHHHAGAPGAAGPAAGRATTETGYHD 430
AHHHHHH G A G T D
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMTHAIRPVD 30
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein
complex, enzyme- inhibitor complex, disease mutation,
glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP:
b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Length = 257
Score = 30.2 bits (69), Expect = 1.0
Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 2/18 (11%)
Query: 289 PRRPGHMRAHHHHHHAGA 306
P+ AHHHHHH A
Sbjct: 228 PKSCA--AAHHHHHHGAA 243
Score = 30.2 bits (69), Expect = 1.0
Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 2/18 (11%)
Query: 394 PRRPGHMRAHHHHHHAGA 411
P+ AHHHHHH A
Sbjct: 228 PKSCA--AAHHHHHHGAA 243
>3mdx_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; metal-binding,
nucleotide metabolism, structural genomics; 1.45A
{Brucella melitensis} PDB: 3mbq_A
Length = 178
Score = 29.2 bits (66), Expect = 1.5
Identities = 20/74 (27%), Positives = 27/74 (36%), Gaps = 15/74 (20%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTETGYHDRVKERLKPYVKD----QY------GCDL--- 343
AHHHHHH G A G T + + + K Y G DL
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMTAASSSAPTLGIIRLEHAKGLDLPAYETAGSAGMDLRAA 61
Query: 344 --LDKLLLLDPSKR 355
D+ ++L P +R
Sbjct: 62 VAEDRQIVLLPGRR 75
>3osq_A Maltose-binding periplasmic protein, green fluore protein;
engineered protein, sensor protein, fluorescent protein,
MBP maltose sensor; HET: C12 MAL; 1.90A {Escherichia
coli}
Length = 661
Score = 30.1 bits (67), Expect = 1.5
Identities = 9/28 (32%), Positives = 9/28 (32%)
Query: 295 MRAHHHHHHAGAPGAAGPAAGRATTETG 322
MR HHHHH G G
Sbjct: 1 MRGSHHHHHHGMASMTGGQQMGRDLYDD 28
Score = 30.1 bits (67), Expect = 1.5
Identities = 9/28 (32%), Positives = 9/28 (32%)
Query: 400 MRAHHHHHHAGAPGAAGPAAGRATTETG 427
MR HHHHH G G
Sbjct: 1 MRGSHHHHHHGMASMTGGQQMGRDLYDD 28
>3tyj_A BCLA protein; exosporium, protein binding; 2.15A {Bacillus
anthracis} PDB: 3twi_A
Length = 155
Score = 29.0 bits (64), Expect = 1.6
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 6/32 (18%)
Query: 297 AHHHHHH-----AGAPGAAG-PAAGRATTETG 322
+HHHHHH G P G PA A G
Sbjct: 4 SHHHHHHENLYFQGGPSGLGLPAGLYAFNSGG 35
Score = 29.0 bits (64), Expect = 1.6
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 6/32 (18%)
Query: 402 AHHHHHH-----AGAPGAAG-PAAGRATTETG 427
+HHHHHH G P G PA A G
Sbjct: 4 SHHHHHHENLYFQGGPSGLGLPAGLYAFNSGG 35
>3mix_A Flagellar biosynthesis protein FLHA; flagella biosynthesis, protein
transport, type III secretion; 2.30A {Bacillus subtilis}
Length = 382
Score = 29.8 bits (67), Expect = 1.7
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 27 HLIEICRTKANQYNRYRSTFYLVFDFCEHDLAGLLSNIHVK-FSLGEIKKVIQQLLN 82
H+ E + A++ + T L+ D + L+ + S+G+I+KV+ +LL
Sbjct: 177 HITEKIKQHAHELIGRQETKQLI-DHLKESYPVLVEEVTPNPLSVGDIQKVLAKLLK 232
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase
directed evolution; 1.50A {Bacillus subtilis} SCOP:
c.69.1.1 PDB: 1c7j_A 1c7i_A
Length = 489
Score = 29.9 bits (68), Expect = 1.8
Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 223 KERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQS- 281
+E L ++ G L +K L P +S + D + P + + +
Sbjct: 324 QETLDAALEYLLGKPLAEKAADLYPRSL-ESQIHMMTDLLFWRPA-VAYASAQSHYAPVW 381
Query: 282 MFEYLAPPRRPGHMRAHH 299
M+ + P +P + +A H
Sbjct: 382 MYRFDWHPEKPPYNKAFH 399
Score = 29.9 bits (68), Expect = 1.8
Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 328 KERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQS- 386
+E L ++ G L +K L P +S + D + P + + +
Sbjct: 324 QETLDAALEYLLGKPLAEKAADLYPRSL-ESQIHMMTDLLFWRPA-VAYASAQSHYAPVW 381
Query: 387 MFEYLAPPRRPGHMRAHH 404
M+ + P +P + +A H
Sbjct: 382 MYRFDWHPEKPPYNKAFH 399
>3cxm_A Uracil-DNA glycosylase; base excision repair, BER, DNA damage
repair, MS SGPP, hydrolase, 5-bromouracil; 1.50A
{Leishmania naiffi}
Length = 268
Score = 29.6 bits (67), Expect = 1.8
Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 8/51 (15%)
Query: 297 AHHHHHHAGAP--GAAGPAAGRATTETGYHDRV------KERLKPYVKDQY 339
AHHHHHH G GP + + + + + + ++ L P D +
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMMSVSSSRWLAGLITNPEWRDFLAPITADSW 52
Score = 28.8 bits (65), Expect = 2.8
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 402 AHHHHHHAGAPGAAGPAAGRATT 424
AHHHHHH G A G +
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMMS 24
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A,
flavin adenine dinucleotide, selenomethionine, F
flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis
str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Length = 480
Score = 29.8 bits (68), Expect = 1.9
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTETGYHDRVKERLKP 333
+HHHHHH A G GR T Y D K+R
Sbjct: 4 SHHHHHHGMASMTGGQQMGR----TLYDDDDKDRWGS 36
Score = 29.0 bits (66), Expect = 3.3
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 402 AHHHHHHAGAPGAAGPAAGRATTETGYHDR 431
+HHHHHH A G GR + DR
Sbjct: 4 SHHHHHHGMASMTGGQQMGRTLYDDDDKDR 33
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.95A {Mycobacterium avium}
Length = 299
Score = 29.5 bits (67), Expect = 2.0
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
Query: 297 AHHHHHHAGA--PGAAGPAA--GR 316
AHHHHHH G GP + G+
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMAGK 25
Score = 29.5 bits (67), Expect = 2.0
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
Query: 402 AHHHHHHAGA--PGAAGPAA--GR 421
AHHHHHH G GP + G+
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMAGK 25
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid,
structural genomics; 1.95A {Mycobacterium
thermoresistibile}
Length = 317
Score = 29.5 bits (67), Expect = 2.2
Identities = 13/37 (35%), Positives = 14/37 (37%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTETGYHDRVKERLKP 333
AHHHHHH G A G RV R +
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMVDPVRRSTRVSARGQG 38
Score = 28.4 bits (64), Expect = 5.0
Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
Query: 402 AHHHHHHAGAPGA--AGPAAGRATT 424
AHHHHHH G A GP +
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMVDPV 26
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics
center for infectious disease, S pathogenic fungus,
eukaryote; 2.20A {Coccidioides immitis RS}
Length = 310
Score = 29.3 bits (66), Expect = 2.3
Identities = 11/32 (34%), Positives = 12/32 (37%), Gaps = 7/32 (21%)
Query: 297 AHHHHHHAG-------APGAAGPAAGRATTET 321
AHHHHHH G PG+ A
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMASALAGPRFPP 33
Score = 29.3 bits (66), Expect = 2.3
Identities = 11/32 (34%), Positives = 12/32 (37%), Gaps = 7/32 (21%)
Query: 402 AHHHHHHAG-------APGAAGPAAGRATTET 426
AHHHHHH G PG+ A
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMASALAGPRFPP 33
>3put_A Hypothetical conserved protein; structural genomics, PSI-biology,
protein structure initiati northeast structural genomics
consortium; 1.83A {Rhizobium etli cfn 42} PDB: 3otl_A*
Length = 166
Score = 28.6 bits (64), Expect = 2.4
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 4/41 (9%)
Query: 266 PMPSDLSKMLAQHTQSMFE----YLAPPRRPGHMRAHHHHH 302
+ Q T+ + +L P H+ HHHHH
Sbjct: 126 LDGYGDNGARLQGTEIGLDNLELFLVRETSPIHLEHHHHHH 166
Score = 28.6 bits (64), Expect = 2.4
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 4/41 (9%)
Query: 371 PMPSDLSKMLAQHTQSMFE----YLAPPRRPGHMRAHHHHH 407
+ Q T+ + +L P H+ HHHHH
Sbjct: 126 LDGYGDNGARLQGTEIGLDNLELFLVRETSPIHLEHHHHHH 166
>1s3r_A Intermedilysin; toxin; 2.60A {Streptococcus intermedius}
Length = 535
Score = 29.5 bits (65), Expect = 2.7
Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Query: 295 MRAHHHHHHAGAPGAAGPAAGRATTETGYHDRVKERLKP 333
M HHHHH G A G+ Y D K+R
Sbjct: 1 MGGSHHHHHH---GMASMTGGQQMGRDLYDDDDKDRWGS 36
>3be3_A Uncharacterized protein; PFAM DUF1653, PSI-2, structural genomics,
protein structure initiative; 2.04A {Bordetella
bronchiseptica RB50}
Length = 91
Score = 27.6 bits (61), Expect = 2.7
Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 1/21 (4%)
Query: 283 FEYLAPPRRPGHMRAHHHHHH 303
F Y+ P HHHHHH
Sbjct: 72 FAYVGHVT-PEQGEGHHHHHH 91
Score = 27.6 bits (61), Expect = 2.7
Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 1/21 (4%)
Query: 388 FEYLAPPRRPGHMRAHHHHHH 408
F Y+ P HHHHHH
Sbjct: 72 FAYVGHVT-PEQGEGHHHHHH 91
>2ejh_A CYAN-emitting GFP-like protein, kusabira-CYAN (KCY); structural
genomics, NPPSFA, national project on protein structural
and functional analyses; HET: GYS; 1.40A {Fungia
concinna} PDB: 2zo6_A* 2eji_A* 2zo7_A*
Length = 255
Score = 29.2 bits (65), Expect = 2.7
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTETGYHDRVKERLKPYVK 336
+HHHHHH A G GR + D +KP +K
Sbjct: 4 SHHHHHHGMASMTGGQQMGRDLYDDDDKDPTMSVIKPEMK 43
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty
acid synthase, acyl-carrier-protein, beta-ketoacyl RED
beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces
cerevisiae}
Length = 1688
Score = 29.5 bits (66), Expect = 3.1
Identities = 20/130 (15%), Positives = 29/130 (22%), Gaps = 42/130 (32%)
Query: 283 FEYLAPPRRPGHMRAHHH---------HHHA----GAPGAAGPAAGRATTETGYHDRVKE 329
FEY+ P + P A Y +V
Sbjct: 1422 FEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPDYLYGAITEDRYNE-YVAKVSA 1480
Query: 330 RLK----------------------PYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFF 367
R K PY + ++ + LDP R D F
Sbjct: 1481 REKSAYKFFHNGMIYNKLFVSKEHAPYTDEL------EEDVYLDPLARVSKDKKSGSLTF 1534
Query: 368 WTDPMPSDLS 377
+ + S S
Sbjct: 1535 NSKNIQSKDS 1544
>3d31_C Sulfate/molybdate ABC transporter, permease protein; ATP-binding,
nucleotide-binding, membrane, transmembrane, transport
protein; 3.00A {Methanosarcina acetivorans} SCOP:
f.58.1.1
Length = 295
Score = 28.9 bits (65), Expect = 3.1
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 293 GHMRAHHHHHHAGAPGAAGPAAGRATT 319
GH HHHHHH+ +A
Sbjct: 2 GHHHHHHHHHHSSGENLYFQGHMKAKN 28
Score = 28.9 bits (65), Expect = 3.1
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 398 GHMRAHHHHHHAGAPGAAGPAAGRATT 424
GH HHHHHH+ +A
Sbjct: 2 GHHHHHHHHHHSSGENLYFQGHMKAKN 28
>2jvd_A UPF0291 protein YNZC; solution structure, construct optimization,
cytoplasm, structural genomics, unknown function, PSI-2;
NMR {Bacillus subtilis}
Length = 54
Score = 26.3 bits (58), Expect = 3.2
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Query: 284 EYLAPPRRPGHMRAHHHHHH 303
EYL R M+ HHHHH
Sbjct: 36 EYLKGFR--SSMKLEHHHHH 53
Score = 26.3 bits (58), Expect = 3.2
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Query: 389 EYLAPPRRPGHMRAHHHHHH 408
EYL R M+ HHHHH
Sbjct: 36 EYLKGFR--SSMKLEHHHHH 53
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type
transferase; 1.90A {Marchantia polymorpha}
Length = 413
Score = 28.8 bits (64), Expect = 3.3
Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Query: 295 MRAHHHHHHAG--APGAAGPAAGRA 317
M+ HHHHHH G P + + R+
Sbjct: 1 MKHHHHHHHHGGLVPRGSHGGSSRS 25
Score = 28.8 bits (64), Expect = 3.3
Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Query: 400 MRAHHHHHHAG--APGAAGPAAGRA 422
M+ HHHHHH G P + + R+
Sbjct: 1 MKHHHHHHHHGGLVPRGSHGGSSRS 25
>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A
{Uncultured bacterium} SCOP: d.17.4.11
Length = 156
Score = 28.1 bits (62), Expect = 3.5
Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 17/133 (12%)
Query: 298 HHHHHHAGAPGAAGPAAGRATTETGYHDRVKERLKPYVKDQYGCDLLDKLLLLDPSKRFD 357
HHHHHH G GP + ++ + + + + S
Sbjct: 2 HHHHHHMGI--VTGPIIDHSKENDVMNEAEQNA-----------ETVRRGYAAFNSGDMK 48
Query: 358 SDAALNH-DFFWTDPMPSDLS--KMLAQHTQSMFEYLAPPRRPGHMRAHHHHHHAGAPGA 414
+ L + W P S ++ + + F G +A H G
Sbjct: 49 TLTELFDENASWHTPGRSRIAGDHKGREAIFAQFGRY-GGETGGTFKAVLLHVLKSDDGR 107
Query: 415 AGPAAGRATTETG 427
G
Sbjct: 108 VIGIHRNTAERGG 120
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A
{Enterobacteria phage k1-5}
Length = 542
Score = 29.0 bits (64), Expect = 3.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 297 AHHHHHHAGAPGAAGPAAGR 316
+HHHHHH A G GR
Sbjct: 4 SHHHHHHGMASMTGGQQMGR 23
Score = 29.0 bits (64), Expect = 3.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 402 AHHHHHHAGAPGAAGPAAGR 421
+HHHHHH A G GR
Sbjct: 4 SHHHHHHGMASMTGGQQMGR 23
>3t6g_A SH2 domain-containing protein 3C; CDC25-homology domain, GTPase
exchange factor, focal-adhesio targeting domain,
signaling protein; 2.50A {Homo sapiens}
Length = 331
Score = 28.6 bits (63), Expect = 3.7
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 282 MFEYLAPPRRPGHMRAHHHHHH 303
+ L P R + HHHHHH
Sbjct: 310 LSHKLEPAVRSSELLEHHHHHH 331
Score = 28.6 bits (63), Expect = 3.7
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 387 MFEYLAPPRRPGHMRAHHHHHH 408
+ L P R + HHHHHH
Sbjct: 310 LSHKLEPAVRSSELLEHHHHHH 331
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein
structure initiative, PS nysgrc; 1.85A {Chromohalobacter
salexigens} PDB: 3nfu_A
Length = 450
Score = 29.0 bits (65), Expect = 3.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 289 PRRPGHMRAHHHHHH 303
P+RP + HHHHHH
Sbjct: 436 PKRPALVEGHHHHHH 450
Score = 29.0 bits (65), Expect = 3.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 394 PRRPGHMRAHHHHHH 408
P+RP + HHHHHH
Sbjct: 436 PKRPALVEGHHHHHH 450
>3ks4_A Polymerase cofactor VP35; RNA-binding protein, protein-RNA complex,
interferon, HOST cytoplasm, interferon antiviral system
evasion; 2.40A {Reston ebolavirus} PDB: 3ks8_A
Length = 184
Score = 28.3 bits (62), Expect = 3.8
Identities = 22/88 (25%), Positives = 31/88 (35%), Gaps = 15/88 (17%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTETGYHDRVKERLKPYVKDQYGCDLLDKLLLLDPSKRF 356
AHHHHHH GPA G D + V++ Y K
Sbjct: 2 AHHHHHHVDDDDKPGPALYEENALKGKIDDPNSYVPDAVQEAY--------------KNL 47
Query: 357 DSDAALNHDFFWTDPM-PSDLSKMLAQH 383
DS + L + F + DL +++ H
Sbjct: 48 DSTSTLTEENFGKPYISAKDLKEIMYDH 75
>2rr3_B OSBP, oxysterol-binding protein 1; lipid transport, transport,
protein-peptide complex, major S protein domain, protein
binding; NMR {Homo sapiens}
Length = 47
Score = 25.8 bits (56), Expect = 3.9
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Query: 284 EYLAPPRRPGHMR--AHHHHHH 303
E + P GH R +HHHHHH
Sbjct: 26 EIITMPENLGHKRTGSHHHHHH 47
Score = 25.8 bits (56), Expect = 3.9
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Query: 389 EYLAPPRRPGHMR--AHHHHHH 408
E + P GH R +HHHHHH
Sbjct: 26 EIITMPENLGHKRTGSHHHHHH 47
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 28.2 bits (62), Expect = 3.9
Identities = 8/41 (19%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Query: 197 PES---WPGVETLDLYNKMELPKAQKRKVKERLKPYVKDQY 234
PES W + L K +++ +E+ K +++
Sbjct: 84 PESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWN 124
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide
oxidoreductase class I, rhodan coenzyme A, flavin
adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus
anthracis} PDB: 3icr_A* 3ict_A*
Length = 588
Score = 28.7 bits (65), Expect = 4.0
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTETGYHDRVKER 330
+HHHHHH A G GR T Y D K+R
Sbjct: 4 SHHHHHHGMASMTGGQQMGR----TLYDDDDKDR 33
Score = 28.0 bits (63), Expect = 8.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 402 AHHHHHHAGAPGAAGPAAGRATTETGYHDR 431
+HHHHHH A G GR + DR
Sbjct: 4 SHHHHHHGMASMTGGQQMGRTLYDDDDKDR 33
>1nla_A Transcriptional repressor ARC; 3(10) helix, beta-ribbon,
beta-sheet, structural switching; NMR {Enterobacteria
phage P22} SCOP: a.43.1.1
Length = 64
Score = 26.3 bits (57), Expect = 4.0
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 290 RRPGHMRAHHHHHH 303
++ G + AHHHHHH
Sbjct: 46 KKEGRIGAHHHHHH 59
Score = 26.3 bits (57), Expect = 4.0
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 395 RRPGHMRAHHHHHH 408
++ G + AHHHHHH
Sbjct: 46 KKEGRIGAHHHHHH 59
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide
binding, hydrogenase maturation factor transferase; HET:
ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A*
3ttf_A* 3ttd_A 3tsq_A
Length = 657
Score = 28.9 bits (65), Expect = 4.1
Identities = 9/39 (23%), Positives = 9/39 (23%), Gaps = 6/39 (15%)
Query: 291 RPGHMRAHHHHHHA------GAPGAAGPAAGRATTETGY 323
P HHH H A P G G
Sbjct: 379 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGM 417
Score = 28.9 bits (65), Expect = 4.1
Identities = 9/39 (23%), Positives = 9/39 (23%), Gaps = 6/39 (15%)
Query: 396 RPGHMRAHHHHHHA------GAPGAAGPAAGRATTETGY 428
P HHH H A P G G
Sbjct: 379 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGM 417
>2fvn_A Protein AFAD; AFAE, fibrillar, afimbrial, integrin-binding, DAEC,
DAF, ceacam, cell adhesion; NMR {Escherichia coli} SCOP:
b.2.3.2 PDB: 2ixq_A
Length = 153
Score = 27.9 bits (61), Expect = 4.1
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 295 MRAHHHHHHAGAP 307
MR HHHHH G+
Sbjct: 1 MRGSHHHHHHGSA 13
Score = 27.9 bits (61), Expect = 4.1
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 400 MRAHHHHHHAGAP 412
MR HHHHH G+
Sbjct: 1 MRGSHHHHHHGSA 13
>2bbd_A Coat protein; archaea, hyperthermophIle, evolution, crystal, viral;
2.04A {Sulfolobus turreted icosahedral virus}
Length = 350
Score = 28.7 bits (63), Expect = 4.1
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 266 PMPSDLSKMLAQHTQSMFEYLAPPRRPGHMRAHHHHHH 303
P L+ + AQ + +Y+A +R ++ HHHHHH
Sbjct: 315 PYYDQLAALPAQVAAIVQQYVARQKR--RIKRHHHHHH 350
Score = 28.7 bits (63), Expect = 4.1
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 371 PMPSDLSKMLAQHTQSMFEYLAPPRRPGHMRAHHHHHH 408
P L+ + AQ + +Y+A +R ++ HHHHHH
Sbjct: 315 PYYDQLAALPAQVAAIVQQYVARQKR--RIKRHHHHHH 350
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer,
structural genomics; HET: PLP; 1.50A {Mycobacterium
tuberculosis} PDB: 3vom_A*
Length = 398
Score = 28.8 bits (65), Expect = 4.1
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 295 MRAHHHHHHAGAPGAAGPAAGRATTETGYHDRVKERLKP 333
M +HHHHH + AG + H + +KP
Sbjct: 1 MSYYHHHHHHLESTSLYKKAGFMADQLTPHLEIPTAIKP 39
>1v33_A DNA primase small subunit; nucleotidyl transferase, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: DNA; 1.80A {Pyrococcus
horikoshii} SCOP: d.264.1.1 PDB: 1v34_A* 1g71_A*
Length = 366
Score = 28.8 bits (63), Expect = 4.1
Identities = 13/103 (12%), Positives = 28/103 (27%), Gaps = 16/103 (15%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTETGYHDRVKERLKPYVKDQYGCDLLDKLLLLDPSKR- 355
+HHHHHH+ G + E +E K + +++ + ++ R
Sbjct: 4 SHHHHHHSS--GLVPRGSHMLLRE-----VTREERKNFYTNEWKVKDIPDFIVKTLELRE 56
Query: 356 -----FDSDAALNHDFFWTDPMPSDLSKMLAQHTQSMFEYLAP 393
+ + + DL +
Sbjct: 57 FGFDHSGEGPSDRKNQYTD---IRDLEDYIRATAPYAVYSSVA 96
>1yx4_A 26S proteasome non-ATPase regulatory subunit 4; polyubiquitin, UIM,
hydrolase; NMR {Homo sapiens} PDB: 1yx5_A 1yx6_A 2kde_A
2kdf_A
Length = 132
Score = 27.7 bits (60), Expect = 4.2
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 293 GHMRAHHHHHHAGAPGAAGPAAGRATTETGY 323
GH HHHHHH+ G ++ +
Sbjct: 2 GHHHHHHHHHHSSGHIEGRHMLGLGASDFEF 32
Score = 27.7 bits (60), Expect = 4.2
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 398 GHMRAHHHHHHAGAPGAAGPAAGRATTETGY 428
GH HHHHHH+ G ++ +
Sbjct: 2 GHHHHHHHHHHSSGHIEGRHMLGLGASDFEF 32
>3o2e_A BOLA-like protein; ssgcid, iodide, SAD, seattle structural genom
center for infectious disease, BOL like protein, unknown
FU; 1.95A {Babesia bovis}
Length = 105
Score = 27.0 bits (60), Expect = 4.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTETGYHDRVKERLKP 333
AHHHHHH G A G +++ +R++ L P
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMVSKSIVEERLRSMLSP 38
>2ljm_A CSS II, cssii, beta-mammal toxin CSS2; CS ALFA beta; NMR
{Centruroides suffusus suffusus}
Length = 82
Score = 26.9 bits (59), Expect = 4.4
Identities = 13/47 (27%), Positives = 14/47 (29%), Gaps = 19/47 (40%)
Query: 295 MRAHHHHHHAGAPGAAGPAAGRATTETGYHDRVKERLKPYVKDQYGC 341
MR HHHHH G+ GY V GC
Sbjct: 1 MRGSHHHHHHGSIEGRKE---------GY----------LVSKSTGC 28
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Length = 298
Score = 28.4 bits (64), Expect = 4.4
Identities = 12/39 (30%), Positives = 14/39 (35%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTETGYHDRVKERLKPYV 335
AHHHHHH G A G + + E V
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMSAADAQDAVLYEATPGGV 40
Score = 28.0 bits (63), Expect = 5.8
Identities = 10/27 (37%), Positives = 11/27 (40%)
Query: 402 AHHHHHHAGAPGAAGPAAGRATTETGY 428
AHHHHHH G A G +
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMSAADAQ 28
>3osr_A Maltose-binding periplasmic protein, green fluore protein;
engineered protein, sensor protein, fluorescent protein,
MBP maltose sensor; HET: C12 MAL; 2.00A {Escherichia
coli}
Length = 653
Score = 28.8 bits (64), Expect = 4.5
Identities = 9/28 (32%), Positives = 9/28 (32%)
Query: 295 MRAHHHHHHAGAPGAAGPAAGRATTETG 322
MR HHHHH G G
Sbjct: 1 MRGSHHHHHHGMASMTGGQQMGRDLYDD 28
Score = 28.8 bits (64), Expect = 4.5
Identities = 9/28 (32%), Positives = 9/28 (32%)
Query: 400 MRAHHHHHHAGAPGAAGPAAGRATTETG 427
MR HHHHH G G
Sbjct: 1 MRGSHHHHHHGMASMTGGQQMGRDLYDD 28
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase;
endopeptidase activity, protein kinase activity; HET:
TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A*
2vwb_A*
Length = 540
Score = 28.5 bits (64), Expect = 4.7
Identities = 15/75 (20%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 48 LVFDFCEHDLAGLLSNIH---VKFSLGEIKKVIQQLLNGLYYIHSNKILHRDMKAANVLI 104
+FD + ++S I+ K + + + ++ + +H N ++H D+ +N +
Sbjct: 405 YIFDVDLDNKRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF 464
Query: 105 TKTGILKLADFGLAR 119
L + DFGL +
Sbjct: 465 --DKDLYIIDFGLGK 477
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative
II(PSI II), NYSGXRC, structural genomics; 2.55A
{Bacillus thuringiensis str}
Length = 171
Score = 27.8 bits (62), Expect = 4.8
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 266 PMPSDLSKMLAQHTQSMFEYLAPPRRPGHMRAHHHHHH 303
+++ + Y R G HHHHHH
Sbjct: 136 GFSETFINLISGGLANAGSYQGLKRNIG--EGHHHHHH 171
Score = 27.8 bits (62), Expect = 4.8
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 371 PMPSDLSKMLAQHTQSMFEYLAPPRRPGHMRAHHHHHH 408
+++ + Y R G HHHHHH
Sbjct: 136 GFSETFINLISGGLANAGSYQGLKRNIG--EGHHHHHH 171
>2lie_A CCL2 lectin; sugar binding protein; NMR {Coprinopsis cinerea} PDB:
2liq_A*
Length = 153
Score = 27.5 bits (60), Expect = 5.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 298 HHHHHHAGAPGAAGPAAGR 316
HHHHHH+G A +AG
Sbjct: 5 HHHHHHSGDSPAVTLSAGN 23
Score = 27.5 bits (60), Expect = 5.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 403 HHHHHHAGAPGAAGPAAGR 421
HHHHHH+G A +AG
Sbjct: 5 HHHHHHSGDSPAVTLSAGN 23
>2nyx_A Probable transcriptional regulatory protein, RV14; alpha/beta,
structural genomics, PSI-2; 2.30A {Mycobacterium
tuberculosis}
Length = 168
Score = 27.9 bits (62), Expect = 5.0
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 287 APPRRPGHMRAHHHHHH 303
P R R+HHHHHH
Sbjct: 152 EPDARYEIERSHHHHHH 168
Score = 27.9 bits (62), Expect = 5.0
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 392 APPRRPGHMRAHHHHHH 408
P R R+HHHHHH
Sbjct: 152 EPDARYEIERSHHHHHH 168
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ,
MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP:
a.43.1.3
Length = 55
Score = 25.9 bits (56), Expect = 5.1
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 261 FFWTDPMPSDLSKMLAQHTQSMFEYLA----PPRRPGHMRAHHHHHHAGA 306
+++D L KM + +S+ Y+ R MR HHHHH G+
Sbjct: 6 LYFSDEQYQKLEKMANEEEESVGSYIKRYILKALRKIEMRGSHHHHHHGS 55
Score = 25.9 bits (56), Expect = 5.1
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 366 FFWTDPMPSDLSKMLAQHTQSMFEYLA----PPRRPGHMRAHHHHHHAGA 411
+++D L KM + +S+ Y+ R MR HHHHH G+
Sbjct: 6 LYFSDEQYQKLEKMANEEEESVGSYIKRYILKALRKIEMRGSHHHHHHGS 55
>2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel,
glycosidase, hydrolase; 2.00A {Bifidobacterium longum}
Length = 1376
Score = 28.8 bits (63), Expect = 5.2
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATT 319
+HHHHHH+ G + T
Sbjct: 4 SHHHHHHSSGLVPRGSHMVASET 26
Score = 28.8 bits (63), Expect = 5.2
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 402 AHHHHHHAGAPGAAGPAAGRATT 424
+HHHHHH+ G + T
Sbjct: 4 SHHHHHHSSGLVPRGSHMVASET 26
>1z00_A DNA excision repair protein ERCC-1; helix-hairpin-helix, hydrolase;
HET: DNA; NMR {Homo sapiens} SCOP: a.60.2.5
Length = 89
Score = 26.7 bits (59), Expect = 5.4
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 280 QSMFEYLAPP--RRPGHMRAHHHHH 302
+ +F+ L P + PG + HHHHH
Sbjct: 65 RRLFDVLHEPFLKVPGGLEHHHHHH 89
Score = 26.7 bits (59), Expect = 5.4
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 385 QSMFEYLAPP--RRPGHMRAHHHHH 407
+ +F+ L P + PG + HHHHH
Sbjct: 65 RRLFDVLHEPFLKVPGGLEHHHHHH 89
>3oa3_A Aldolase; structural genomics, seattle structural genomics center
for infectious disease, ssgcid, pathogenic fungus; 1.60A
{Coccidioides immitis}
Length = 288
Score = 28.1 bits (63), Expect = 5.4
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTET 321
AHHHHHH G A G ++
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMSSLN 26
Score = 28.1 bits (63), Expect = 5.4
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 402 AHHHHHHAGAPGAAGPAAGRATTET 426
AHHHHHH G A G ++
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMSSLN 26
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics,
niaid, national institute of allergy AN infectious
diseases; 1.75A {Burkholderia thailandensis}
Length = 432
Score = 28.2 bits (63), Expect = 5.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTET 321
AHHHHHH G A G ++
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMVSQV 26
Score = 28.2 bits (63), Expect = 5.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 402 AHHHHHHAGAPGAAGPAAGRATTET 426
AHHHHHH G A G ++
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMVSQV 26
>3mx1_A ECO29KIR; type II restriction endonuclease, GIY-YIG endonuclease,
HYDR; 2.30A {Escherichia coli} PDB: 3mx4_A* 3nic_A*
Length = 235
Score = 27.9 bits (61), Expect = 5.9
Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 9/66 (13%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTETGYHDRVKERLKPYVKDQYGCDLLDKLLL-----LD 351
+HHHHHH+ G + G DR + + + D + L
Sbjct: 4 SHHHHHHSSGLVPRGSSMG----HNKKFDRSEHVYRNDSFLELIKDAVRFFSGTPVHSLP 59
Query: 352 PSKRFD 357
P +RF
Sbjct: 60 PPERFQ 65
>3vhj_A BFPC; type IV pilus biogenesis, BFPD, membrane, membrane protein;
1.90A {Escherichia coli}
Length = 172
Score = 27.5 bits (60), Expect = 6.8
Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Query: 246 DPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSMFEYLAPPRRPGHMRAHHHHHH 303
D K F A + PSD+ + + L ++ +HHHHHH
Sbjct: 118 DAKKFFFDHVA-YGYPWDRTYSPSDVG--VGESRSISELSLIKGKKLKEKGSHHHHHH 172
Score = 27.5 bits (60), Expect = 6.8
Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Query: 351 DPSKRFDSDAALNHDFFWTDPMPSDLSKMLAQHTQSMFEYLAPPRRPGHMRAHHHHHH 408
D K F A + PSD+ + + L ++ +HHHHHH
Sbjct: 118 DAKKFFFDHVA-YGYPWDRTYSPSDVG--VGESRSISELSLIKGKKLKEKGSHHHHHH 172
>1y08_A Hypothetical protein SPY0861; cysteine proteinase, papain-like fold
with major insertions, hydrolase; 1.93A {Streptococcus
pyogenes} SCOP: d.3.1.12 PDB: 2avw_A 2au1_A
Length = 323
Score = 27.7 bits (60), Expect = 7.1
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTETGYHDRVK 328
+HHHHHH+ G R + T YH
Sbjct: 4 SHHHHHHSSGLVPRGSHMIRYSEVTPYHVTSV 35
Score = 27.7 bits (60), Expect = 7.2
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 402 AHHHHHHAGAPGAAGPAAGRATTETGYHDRVF 433
+HHHHHH+ G R + T YH
Sbjct: 4 SHHHHHHSSGLVPRGSHMIRYSEVTPYHVTSV 35
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose
metabolic process, PFKB family,11206G, PSI-II, NYSGXRC,
structural genomics; HET: ATP; 1.79A {Escherichia coli
O6} PDB: 3k9e_A
Length = 330
Score = 27.9 bits (63), Expect = 7.1
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 8/38 (21%)
Query: 266 PMPSDLSKMLAQHTQSMFEYLAPPRRPGHMRAHHHHHH 303
++ + +H S+ R HHHHHH
Sbjct: 301 SRLMEIETFIQRHDMSI--------REAAQEGHHHHHH 330
Score = 27.9 bits (63), Expect = 7.1
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 8/38 (21%)
Query: 371 PMPSDLSKMLAQHTQSMFEYLAPPRRPGHMRAHHHHHH 408
++ + +H S+ R HHHHHH
Sbjct: 301 SRLMEIETFIQRHDMSI--------REAAQEGHHHHHH 330
>3tou_A Glutathione S-transferase protein; GSH binding site, GSH; HET: GSH;
1.75A {Ralstonia solanacearum} PDB: 3tot_A*
Length = 226
Score = 27.6 bits (62), Expect = 7.3
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 287 APPRRPGHMRAHHHHHHAGAP 307
P + ++HHHHHH P
Sbjct: 202 QPQAENLYFQSHHHHHHWSHP 222
Score = 27.6 bits (62), Expect = 7.3
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 392 APPRRPGHMRAHHHHHHAGAP 412
P + ++HHHHHH P
Sbjct: 202 QPQAENLYFQSHHHHHHWSHP 222
>3dwa_A SUBB, subtilase cytotoxin, subunit B; HET: 1PE; 2.08A {Escherichia
coli} PDB: 3dwp_A* 3dwq_A*
Length = 126
Score = 26.7 bits (58), Expect = 7.3
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Query: 263 WTDPMPSDL---SKMLAQHTQSMFEYLAPPRRPGHMRAHHHHHH 303
WT P + ++ T + P R + HHHHHH
Sbjct: 83 WTYPPFVKALTSNALVGLSTCTTSTECFGPDRKKNSLEHHHHHH 126
Score = 26.7 bits (58), Expect = 7.3
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Query: 368 WTDPMPSDL---SKMLAQHTQSMFEYLAPPRRPGHMRAHHHHHH 408
WT P + ++ T + P R + HHHHHH
Sbjct: 83 WTYPPFVKALTSNALVGLSTCTTSTECFGPDRKKNSLEHHHHHH 126
>1m1h_A Transcription antitermination protein NUSG; transcription
termination, RNP motif, immunoglobulin fold, nucleic
acid interaction; 1.95A {Aquifex aeolicus} SCOP:
b.114.1.1 d.58.42.1 PDB: 1m1g_A 1npp_A 1npr_A
Length = 248
Score = 27.7 bits (62), Expect = 7.4
Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Query: 319 TETGYHDRVKERLKPYVKDQYGCDLLDKLLLLDPSKRFDSDAALNHDFFWTDPMPSDLSK 378
E G + KE L ++ + DL+D++++ K D+S
Sbjct: 18 VEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRAQGKEKYRLSLKGNARDISV 77
Query: 379 MLAQ----HTQSMFE 389
+ + E
Sbjct: 78 LGKKGVTTFRIENGE 92
>3plu_A Ubiquitin-like modifier HUB1; ubiquitin-like, HUB-1, SNU66, peptide
binding protein; 1.40A {Saccharomyces cerevisiae} PDB:
3plv_A 1m94_A 1p0r_A
Length = 93
Score = 26.1 bits (57), Expect = 7.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 297 AHHHHHHAGAPGAAGP 312
+HHHHHH+ G
Sbjct: 4 SHHHHHHSSGLVPRGS 19
Score = 26.1 bits (57), Expect = 7.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 402 AHHHHHHAGAPGAAGP 417
+HHHHHH+ G
Sbjct: 4 SHHHHHHSSGLVPRGS 19
>3nj2_A DUF269-containing protein; cyanobacteria, circadium rhythms,
nitrogen fixation, unknown; 1.59A {Cyanothece SP}
Length = 174
Score = 27.2 bits (60), Expect = 9.0
Identities = 12/70 (17%), Positives = 24/70 (34%), Gaps = 11/70 (15%)
Query: 297 AHHHHHHAG--APGAAGPAAGRATTETGY-HDRVKERLKPY-VKDQYGC-------DLLD 345
+HHHHHH+ P + T ++ ++ D YG ++
Sbjct: 4 SHHHHHHSSGLVPRGSHMTNSETNTLLVEQSPFLQSLVQQIRAYDHYGVYRTWTDELVIA 63
Query: 346 KLLLLDPSKR 355
++ +R
Sbjct: 64 PYVIPKKKRR 73
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine;
1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB:
1xrf_A 3d6n_A*
Length = 467
Score = 27.5 bits (62), Expect = 9.1
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 295 MRAHHHHHHAGAPGAAGPAAGRATTETGYHDRVKER 330
MR HHHHH G G G+ Y D K+R
Sbjct: 12 MRGSHHHHHHGMASMTG---GQQMGRDLYDDDDKDR 44
>3uk1_A Transketolase; structural genomics, seattle structural genomics
center for infectious disease, ssgcid, thiamine
pyrophosphate; 2.15A {Burkholderia thailandensis} PDB:
3upt_A*
Length = 711
Score = 27.5 bits (62), Expect = 9.6
Identities = 11/33 (33%), Positives = 12/33 (36%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTETGYHDRVKE 329
AHHHHHH G A G + D
Sbjct: 2 AHHHHHHMGTLEAQTQGPGSMPPVPRFLDSFSG 34
>2yjp_A Putative ABC transporter, periplasmic binding Pro amino acid;
transport protein, solute-binding protein; 2.26A
{Neisseria gonorrhoeae}
Length = 291
Score = 27.4 bits (61), Expect = 9.6
Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 15/53 (28%)
Query: 293 GHMRAHHHHHHAGAP-----------GAAGPAAGRATTETGYH----DRVKER 330
GH HHHHHH+ AAG +G A + +KE+
Sbjct: 2 GHHHHHHHHHHSSGHIDDDDKHMVGLTAAGGGSGDAQSSQSSGAATVAAIKEK 54
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine
phosphoribosyltransferase, 2-(N-morphol ethanesulfonic
acid (MES), IDP01892; HET: MES; 1.95A {Bacillus
anthracis str} PDB: 3h83_A* 3kb8_A*
Length = 204
Score = 27.1 bits (61), Expect = 9.9
Identities = 7/34 (20%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 298 HHHHHHAGAPGAAGPAAGRATTETGYHDRVKERL 331
HHHHHH+ + + +++ L
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSNAM-MNQDIEKVL 34
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT
calmodulin chimera; calcium sensor, fluorescent protein;
HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A*
3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A*
3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Length = 450
Score = 27.5 bits (61), Expect = 10.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 297 AHHHHHHAGAPGAAGPAAGRATTE 320
+HHHHHH A G GR +
Sbjct: 4 SHHHHHHGMASMTGGQQMGRDLYD 27
Score = 27.5 bits (61), Expect = 10.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 402 AHHHHHHAGAPGAAGPAAGRATTE 425
+HHHHHH A G GR +
Sbjct: 4 SHHHHHHGMASMTGGQQMGRDLYD 27
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.137 0.433
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 7,226,851
Number of extensions: 462595
Number of successful extensions: 10064
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9326
Number of HSP's successfully gapped: 658
Length of query: 433
Length of database: 6,701,793
Length adjustment: 96
Effective length of query: 337
Effective length of database: 4,021,377
Effective search space: 1355204049
Effective search space used: 1355204049
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (26.6 bits)