BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7890
(196 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SEE5|GALK1_ARATH Galactokinase OS=Arabidopsis thaliana GN=GAL1 PE=1 SV=2
Length = 496
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 54 WWFESKSSHEIYLEAYRVERFLSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEAL 113
+ +++H +Y EA RV F S++S+E+KL++LG LMN+SH S + YECS L
Sbjct: 359 FKLHQRAAH-VYSEARRVHGFKDTVNSNLSDEEKLKKLGDLMNESHYSCSVLYECSCPEL 417
Query: 114 DSLVTCFREAGAYGARLTGAGW 135
+ LV +E GA GARLTGAGW
Sbjct: 418 EELVQVCKENGALGARLTGAGW 439
>sp|Q5R6J8|GALK2_PONAB N-acetylgalactosamine kinase OS=Pongo abelii GN=GALK2 PE=2 SV=1
Length = 458
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 59 KSSHEIYLEAYRVERFLSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVT 118
+ + +Y EA RV +F +C + E +Q LG LMNQSH S YECS LD LV
Sbjct: 330 QRAKHVYSEAARVLQFKKICEE--APENMVQLLGELMNQSHMSCRDMYECSCPELDQLVD 387
Query: 119 CFREAGAYGARLTGAGW 135
R+ GA G+RLTGAGW
Sbjct: 388 ICRKFGAQGSRLTGAGW 404
>sp|Q01415|GALK2_HUMAN N-acetylgalactosamine kinase OS=Homo sapiens GN=GALK2 PE=1 SV=1
Length = 458
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 59 KSSHEIYLEAYRVERFLSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVT 118
+ + +Y EA RV +F +C + E +Q LG LMNQSH S YECS LD LV
Sbjct: 330 QRAKHVYSEAARVLQFKKICEE--APENMVQLLGELMNQSHMSCRDMYECSCPELDQLVD 387
Query: 119 CFREAGAYGARLTGAGW 135
R+ GA G+RLTGAGW
Sbjct: 388 ICRKFGAQGSRLTGAGW 404
>sp|Q5XIG6|GALK2_RAT N-acetylgalactosamine kinase OS=Rattus norvegicus GN=Galk2 PE=2
SV=1
Length = 458
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 59 KSSHEIYLEAYRVERFLSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVT 118
+ + +Y EA RV +F VC + + + +Q LG LMNQSH S YECS LD LV
Sbjct: 330 QRAKHVYSEAARVLQFKQVCEA--APDNAVQLLGELMNQSHRSCRDMYECSCPELDQLVD 387
Query: 119 CFREAGAYGARLTGAGW 135
R+ GA G+RLTGAGW
Sbjct: 388 ICRKFGAKGSRLTGAGW 404
>sp|Q68FH4|GALK2_MOUSE N-acetylgalactosamine kinase OS=Mus musculus GN=Galk2 PE=1 SV=1
Length = 458
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 59 KSSHEIYLEAYRVERFLSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVT 118
+ + +Y EA RV +F VC + + +Q LG LMNQSH S YECS LD LV
Sbjct: 330 QRAKHVYSEAARVLQFKQVCED--APDNAVQLLGELMNQSHRSCRDMYECSCPELDQLVD 387
Query: 119 CFREAGAYGARLTGAGW 135
R+ GA G+RLTGAGW
Sbjct: 388 ICRKFGAKGSRLTGAGW 404
>sp|Q54DN6|GALK_DICDI Galactokinase OS=Dictyostelium discoideum GN=galK PE=3 SV=1
Length = 501
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 59 KSSHEIYLEAYRVERFLSVCRSDISEEQK--------------LQQLGTLMNQSHTSLAT 104
K + ++ E RV +F +C+ + +Q+LG LMN+SH S +
Sbjct: 352 KRARHVFTETQRVYKFSEICKQQSNFNNNNNNNNNNSSNNTNIIQELGKLMNESHESCSK 411
Query: 105 KYECSHEALDSLVTCFREAGAYGARLTGAGW 135
+ECS LDSL RE GA G+RLTGAGW
Sbjct: 412 LFECSCSELDSLTKICRENGALGSRLTGAGW 442
>sp|P04385|GAL1_YEAST Galactokinase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GAL1 PE=1 SV=4
Length = 528
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 61 SHEIYLEAYRVERF--LSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVT 118
+ +Y E+ RV + L S ++E +Q G LMN+S S YECS +D + +
Sbjct: 394 AKHVYSESLRVLKAVKLMTTASFTADEDFFKQFGALMNESQASCDKLYECSCPEIDKICS 453
Query: 119 CFREAGAYGARLTGAGW 135
G+YG+RLTGAGW
Sbjct: 454 IALSNGSYGSRLTGAGW 470
>sp|O42821|GAL1_CANPA Galactokinase OS=Candida parapsilosis GN=GAL1 PE=3 SV=1
Length = 504
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 64 IYLEAYRVERFLSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVTCFREA 123
+Y E+ RV + L + + + Q LQ G+LMN+S L E S+ L+ + +
Sbjct: 371 VYRESLRVLKTLQLLSTVVDASQFLQTFGSLMNESQHDLDILNESSNPKLNEICSIALAN 430
Query: 124 GAYGARLTGAGW 135
GAYG+R+TGAGW
Sbjct: 431 GAYGSRVTGAGW 442
>sp|Q8XKP9|GAL1_CLOPE Galactokinase OS=Clostridium perfringens (strain 13 / Type A)
GN=galK PE=3 SV=1
Length = 387
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 84 EEQKLQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGW-----CI 137
+E L+ G LMNQSH SL YE + + LD+L +++ G GAR+TGAG+ I
Sbjct: 289 KENNLELFGQLMNQSHISLRDDYEVTGKELDTLAENAWKQPGVLGARMTGAGFGGCAIAI 348
Query: 138 SQDAHLVNIMAWVQSQPRWCISQDA 162
+AH+ + V + I +A
Sbjct: 349 VNNAHVDEFIKNVGQAYKDAIGYEA 373
>sp|Q0TQU5|GAL1_CLOP1 Galactokinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC
8237 / Type A) GN=galK PE=3 SV=1
Length = 387
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 84 EEQKLQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGW-----CI 137
+E L+ G LMNQSH SL YE + + LD+L +++ G GAR+TGAG+ I
Sbjct: 289 KENNLELFGQLMNQSHISLRDDYEVTGKELDTLAENAWKQPGVLGARMTGAGFGGCAIAI 348
Query: 138 SQDAHLVNIMAWVQSQPRWCISQDA 162
+AH+ + V + I +A
Sbjct: 349 VNNAHVDEFIKNVGQAYKDAIGYEA 373
>sp|P09608|GAL1_KLULA Galactokinase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359
/ DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=GAL1
PE=2 SV=2
Length = 503
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 59 KSSHEIYLEAYRVERFLSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVT 118
+ + +Y EA RV + L + + E ++ G LMN+S S YECS DS+
Sbjct: 375 QRAKHVYSEALRVLKALQLFQK--GESNFFEEFGALMNESQESCDKLYECSCPETDSICE 432
Query: 119 CFREAGAYGARLTGAGW 135
+ G++G+RLTGAGW
Sbjct: 433 IALKNGSFGSRLTGAGW 449
>sp|Q0ST92|GAL1_CLOPS Galactokinase OS=Clostridium perfringens (strain SM101 / Type A)
GN=galK PE=3 SV=1
Length = 387
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 84 EEQKLQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGW 135
+E L+ G LMNQSH SL YE + + LD+L +++ G GAR+TGAG+
Sbjct: 289 KENNLELFGQLMNQSHISLRDDYEVTGKELDTLAENAWKQPGVLGARMTGAGF 341
>sp|Q836P0|GAL1_ENTFA Galactokinase OS=Enterococcus faecalis (strain ATCC 700802 / V583)
GN=galK PE=3 SV=1
Length = 387
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 85 EQKLQQLGTLMNQSHTSLATKYECSHEALDSLVTCFRE-AGAYGARLTGAGW 135
E L++ G L+N SH SL YE + LD+LV C +E G GAR+TGAG+
Sbjct: 289 EGDLEEFGLLLNASHRSLKEDYEVTGIELDTLVACAQEQPGVLGARMTGAGF 340
>sp|Q8RHD0|GAL1_FUSNN Galactokinase OS=Fusobacterium nucleatum subsp. nucleatum (strain
ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) GN=galK
PE=3 SV=1
Length = 389
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 84 EEQKLQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGW 135
++ + + G LMN+SHTSL YE + LDSLV + E G G+R+TGAG+
Sbjct: 290 KKDDIAEFGKLMNKSHTSLRDDYEVTGLELDSLVEAAWEEKGTVGSRMTGAGF 342
>sp|Q5JJC6|KIME_PYRKO Mevalonate kinase OS=Pyrococcus kodakaraensis (strain ATCC BAA-918
/ JCM 12380 / KOD1) GN=mvk PE=3 SV=1
Length = 337
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 71 VERFLSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVTCFREAGAYGARL 130
VE+ V SD+ E K Q LG LMN +H L S + L LV R AGA GA++
Sbjct: 231 VEKAREVITSDLDRELKFQTLGKLMNINH-GLLDALGVSTKKLSELVYAARTAGALGAKI 289
Query: 131 TGAGW 135
TGAG
Sbjct: 290 TGAGG 294
>sp|C6A3T5|KIME_THESM Mevalonate kinase OS=Thermococcus sibiricus (strain MM 739 / DSM
12597) GN=mvk PE=3 SV=1
Length = 333
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 71 VERFLSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVTCFREAGAYGARL 130
VE+ V ++ +E K ++LGTLMN +H L S ++L LV REAGA GA++
Sbjct: 227 VEKAREVILAEYDKEIKFKRLGTLMNINH-GLLDALGVSTKSLSDLVYASREAGALGAKI 285
Query: 131 TGAGW 135
TGAG
Sbjct: 286 TGAGG 290
>sp|B1YIH8|GAL1_EXIS2 Galactokinase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM
13490 / 255-15) GN=galK PE=3 SV=1
Length = 390
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 81 DISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGW 135
D +E +L+ G LMN SH SL YE + + LD+LV + + G GAR+TGAG+
Sbjct: 284 DALKEDRLEAFGQLMNASHRSLRVDYEVTGKELDTLVEAAWAQPGVLGARMTGAGF 339
>sp|Q8U0F3|KIME_PYRFU Mevalonate kinase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM
3638 / JCM 8422 / Vc1) GN=mvk PE=3 SV=1
Length = 334
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 71 VERFLSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVTCFREAGAYGARL 130
VE+ V S++ +E+K ++LG LMN +H L S + L LV R AGA GA++
Sbjct: 228 VEKAKDVILSNVDKEEKFERLGVLMNINH-GLLDALGVSTKKLSELVYAARVAGALGAKI 286
Query: 131 TGAGW 135
TGAG
Sbjct: 287 TGAGG 291
>sp|O59291|KIME_PYRHO Mevalonate kinase OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=mvk PE=3
SV=1
Length = 335
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 71 VERFLSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVTCFREAGAYGARL 130
V++ + S + EE+KL +LG LMN +H L S + L LV R AGA GA+L
Sbjct: 229 VDKAKEIILSKLDEEEKLTKLGELMNINH-GLLDALGVSTKKLGELVYAARTAGAIGAKL 287
Query: 131 TGAGW 135
TGAG
Sbjct: 288 TGAGG 292
>sp|P56091|GAL1_CANAX Galactokinase OS=Candida albicans GN=GAL1 PE=3 SV=1
Length = 515
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 61 SHEIYLEAYRVERFLSV-------CRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEAL 113
+ +Y E+ RV L + S +E L + G LMNQS + L E S++ L
Sbjct: 374 AKHVYQESLRVLETLKLLSTTQTSSNSKDDDESFLVKFGELMNQSQSDLDKLNESSNDKL 433
Query: 114 DSLVTCFREAGAYGARLTGAGW 135
+ + + + G+YG+R+TGAGW
Sbjct: 434 NKICSIALQNGSYGSRITGAGW 455
>sp|Q9HHB6|GAL1_PYRFU Galactokinase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638
/ JCM 8422 / Vc1) GN=galK PE=1 SV=1
Length = 352
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 81 DISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVTCFREAGAYGARLTGAGW 135
D +E ++++G ++ +H LA Y S E LD V E GAYGARLTGAG+
Sbjct: 253 DALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAMELGAYGARLTGAGF 307
>sp|A6M1P8|GAL1_CLOB8 Galactokinase OS=Clostridium beijerinckii (strain ATCC 51743 /
NCIMB 8052) GN=galK PE=3 SV=1
Length = 389
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 84 EEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVT-CFREAGAYGARLTGAGW 135
EE L G LMN SH SL YE + LD+LV+ ++ G GAR+TGAG+
Sbjct: 290 EENDLTLFGKLMNDSHISLRDDYEVTGIELDTLVSLAWKSEGVIGARMTGAGF 342
>sp|Q1WUZ4|GAL1_LACS1 Galactokinase OS=Lactobacillus salivarius (strain UCC118) GN=galK
PE=3 SV=1
Length = 387
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 84 EEQKLQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGW 135
EE L++ G L+N SH SL YE + LD+L T +++ G GAR+TGAG+
Sbjct: 289 EEGDLEKFGRLVNASHVSLEHDYEVTGIELDTLAHTAWKQEGVLGARMTGAGF 341
>sp|Q97EZ6|GAL1_CLOAB Galactokinase OS=Clostridium acetobutylicum (strain ATCC 824 / DSM
792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=galK PE=3
SV=1
Length = 389
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 59 KSSHEIYLEAYRVERFLSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVT 118
++ H +Y ++ +S+ +D L+ G LMN+SH SL YE + LD+LV+
Sbjct: 271 RARHAVYENQRTLKAVVSLNNND------LKTFGKLMNESHISLRDDYEVTGIELDTLVS 324
Query: 119 CFREA-GAYGARLTGAGW 135
E+ G G+R+TGAG+
Sbjct: 325 LALESKGVIGSRMTGAGF 342
>sp|Q9S6S2|GAL1_LACLM Galactokinase OS=Lactococcus lactis subsp. cremoris (strain MG1363)
GN=galK PE=3 SV=1
Length = 399
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 88 LQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGW 135
L + G L+N SH SL YE + LD+L T ++AG GAR+TGAG+
Sbjct: 302 LTKFGELLNASHASLKDDYEVTGLELDTLAETAQKQAGVLGARMTGAGF 350
>sp|Q9R7D7|GAL1_LACLA Galactokinase OS=Lactococcus lactis subsp. lactis (strain IL1403)
GN=galK PE=1 SV=1
Length = 399
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 88 LQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGW 135
L + G L+N SH SL YE + LD+L T ++AG GAR+TGAG+
Sbjct: 302 LTKFGELLNASHASLKDDYEVTGLELDTLAETAQKQAGVLGARMTGAGF 350
>sp|A5UZX0|GAL1_ROSS1 Galactokinase OS=Roseiflexus sp. (strain RS-1) GN=galK PE=3 SV=1
Length = 391
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 84 EEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVTCFRE-AGAYGARLTGAGW 135
E + G LMN+SH SL Y+ S +D LVT + AG YG+RLTGAG+
Sbjct: 285 EAGDIATFGRLMNESHASLRDDYQVSLPDIDFLVTTAQSLAGCYGSRLTGAGF 337
>sp|C5A7L8|KIME_THEGJ Mevalonate kinase OS=Thermococcus gammatolerans (strain DSM 15229 /
JCM 11827 / EJ3) GN=mvk PE=3 SV=1
Length = 334
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 71 VERFLSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVTCFREAGAYGARL 130
VE+ + SD+ E+ + ++LG LMN +H L S + L LV R AGA GA++
Sbjct: 228 VEKAKEILLSDLEEKIRFERLGKLMNINH-GLLDALGVSTKKLSELVYAARTAGALGAKI 286
Query: 131 TGAGW 135
TGAG
Sbjct: 287 TGAGG 291
>sp|B3W7I5|GAL1_LACCB Galactokinase OS=Lactobacillus casei (strain BL23) GN=galK PE=3
SV=1
Length = 388
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 84 EEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVT-CFREAGAYGARLTGAGW-----CI 137
++ L+ G L++ S SLA YE + LD+LVT ++ G GAR+TGAG+ I
Sbjct: 289 QDGDLKTFGKLVSASGVSLAFDYEVTGIELDTLVTNALKQRGVLGARMTGAGFGGCAIAI 348
Query: 138 SQDAHLVNIMAWVQSQPRWCISQDAHL 164
A + + + V R I DAH
Sbjct: 349 VNSADVEDFIDNVGKAYREKIGYDAHF 375
>sp|Q03BB8|GAL1_LACC3 Galactokinase OS=Lactobacillus casei (strain ATCC 334) GN=galK PE=3
SV=1
Length = 388
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 84 EEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVT-CFREAGAYGARLTGAGW-----CI 137
++ L+ G L++ S SLA YE + LD+LVT ++ G GAR+TGAG+ I
Sbjct: 289 QDGDLKTFGKLVSASGVSLAFDYEVTGIELDTLVTNALKQRGVLGARMTGAGFGGCAIAI 348
Query: 138 SQDAHLVNIMAWVQSQPRWCISQDAHL 164
A + + + V R I DAH
Sbjct: 349 VNSADVEDFIDNVGKAYREKIGYDAHF 375
>sp|O84902|GAL1_LACCA Galactokinase OS=Lactobacillus casei GN=galK PE=3 SV=1
Length = 387
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 84 EEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVT-CFREAGAYGARLTGAGW-----CI 137
++ L+ G L++ S SLA YE + LD+LVT ++ G GAR+TGAG+ I
Sbjct: 288 QDGDLKTFGKLVSASGVSLAFDYEVTGIELDTLVTNALKQRGVLGARMTGAGFGGCAIAI 347
Query: 138 SQDAHLVNIMAWVQSQPRWCISQDAHL 164
A + + + V R I DAH
Sbjct: 348 VNSADVEDFIDNVGKTYREKIGYDAHF 374
>sp|Q9V187|KIME_PYRAB Mevalonate kinase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=mvk
PE=3 SV=1
Length = 335
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 71 VERFLSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVTCFREAGAYGARL 130
V++ V S + EE+K +LG LMN +H L S + L LV R AGA GA+L
Sbjct: 229 VDKAKEVIISKLDEEEKFLKLGELMNINH-GLLDALGVSTKKLSELVYAARTAGAIGAKL 287
Query: 131 TGAGW 135
TGAG
Sbjct: 288 TGAGG 292
>sp|O58107|GAL1_PYRHO Galactokinase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=galK PE=1 SV=1
Length = 350
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 81 DISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVTCFREAGAYGARLTGAGW 135
D +E ++++G ++ +H LA YE S + LD V + GAYGARLTGAG+
Sbjct: 251 DALKEGNVEEVGKILTTAHWDLAKNYEVSCKELDFFVERALKLGAYGARLTGAGF 305
>sp|Q5JEK8|GAL1_PYRKO Galactokinase OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 /
JCM 12380 / KOD1) GN=galK PE=3 SV=1
Length = 350
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 81 DISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVTCFREAGAYGARLTGAGWCIS 138
D +E ++ +G LM ++H +A Y S E LD V E GA GARLTGAG+ S
Sbjct: 250 DALKEGDVEAMGQLMVEAHRDIAENYRVSCEELDFFVEKALELGALGARLTGAGFGGS 307
>sp|P96993|GAL1_STRMU Galactokinase OS=Streptococcus mutans serotype c (strain ATCC
700610 / UA159) GN=galK PE=3 SV=2
Length = 390
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 47 LDFGSGGWWFESKSSHEIYL--EAYRVERFLSVCRSDISEEQK------------LQQLG 92
LD S G E YL +A R++R R +SE Q+ L++ G
Sbjct: 242 LDIKSLGELDEETFDEYAYLIKDAKRIKR----ARHAVSENQRTLKAKKALAAGDLEKFG 297
Query: 93 TLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGW 135
L+N SH SL YE + LD+L T + + G GAR+TGAG+
Sbjct: 298 RLVNASHVSLEHDYEVTGIELDTLAHTAWEQEGVLGARMTGAGF 341
>sp|A7NI09|GAL1_ROSCS Galactokinase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8)
GN=galK PE=3 SV=1
Length = 391
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 84 EEQKLQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGW 135
E + G LMN+SH SL Y+ S +D LV T AG YG+RLTGAG+
Sbjct: 285 ERGDVVTFGRLMNESHASLRDDYQVSLPDIDILVETAHHLAGCYGSRLTGAGF 337
>sp|Q03PA8|GAL1_LACBA Galactokinase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170)
GN=galK PE=3 SV=1
Length = 387
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 58 SKSSHEIYLEAYRVERFLSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLV 117
++ H ++ ++ F ++ ++D LQ+ G L+N SH SL + + + LD+LV
Sbjct: 269 KRARHAVFENQRTLKAFDALQKND------LQRFGHLVNASHISLNYDFAVTGKELDTLV 322
Query: 118 -TCFREAGAYGARLTGAGW 135
T +++ G GAR+TGAG+
Sbjct: 323 ETAWQQPGVLGARMTGAGF 341
>sp|Q8DNK7|GAL1_STRR6 Galactokinase OS=Streptococcus pneumoniae (strain ATCC BAA-255 /
R6) GN=galK PE=3 SV=1
Length = 392
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 88 LQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGWC 136
L+ G LMN SH SL YE + LD+LV T + + G GAR+TGAG+
Sbjct: 297 LETFGRLMNASHVSLEHDYEVTGLELDTLVHTAWAQEGVLGARMTGAGFS 346
>sp|Q03JS8|GAL1_STRTD Galactokinase OS=Streptococcus thermophilus (strain ATCC BAA-491 /
LMD-9) GN=galK PE=3 SV=1
Length = 388
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 84 EEQKLQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGW 135
E +L+ G LMN SH SL YE + LD+L T + + G GAR+TGAG+
Sbjct: 289 EAGELEGFGRLMNASHVSLKYDYEVTGLELDTLAHTAWEQEGVLGARMTGAGF 341
>sp|Q97NZ6|GAL1_STRPN Galactokinase OS=Streptococcus pneumoniae serotype 4 (strain ATCC
BAA-334 / TIGR4) GN=galK PE=3 SV=1
Length = 392
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 88 LQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGW 135
L+ G LMN SH SL YE + LD+LV T + + G GAR+TGAG+
Sbjct: 297 LETFGRLMNASHVSLEHDYEVTGLELDTLVHTAWAQEGVLGARMTGAGF 345
>sp|B2G9P6|GAL1_LACRJ Galactokinase OS=Lactobacillus reuteri (strain JCM 1112) GN=galK
PE=3 SV=1
Length = 392
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 81 DISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGWCIS 138
D E+ L++LG L+N SH SL YE + + LD+L + + G GAR+ G G+ S
Sbjct: 291 DAMEKGDLEELGRLINASHVSLKYDYEVTGKELDTLAENAWNQPGCLGARMVGGGFAGS 349
>sp|A5VME2|GAL1_LACRD Galactokinase OS=Lactobacillus reuteri (strain DSM 20016) GN=galK
PE=3 SV=1
Length = 392
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 81 DISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGWCIS 138
D E+ L++LG L+N SH SL YE + + LD+L + + G GAR+ G G+ S
Sbjct: 291 DAMEKGDLEELGRLINASHVSLKYDYEVTGKELDTLAENAWNQPGCLGARMVGGGFAGS 349
>sp|P13045|GAL3_YEAST Protein GAL3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GAL3 PE=1 SV=2
Length = 520
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 59 KSSHEIYLEAYRVERFLSVCRSDI--SEEQKLQQLGTLMNQSHTSLATKYECSHEALDSL 116
+ + +Y E+ RV + L + S ++E G LMN+S S YECS + +
Sbjct: 384 QRAKHVYSESLRVLKALKMMTSATFHTDEDFFTDFGRLMNESQASCDKLYECSCIETNQI 443
Query: 117 VTCFREAGAYGARLTGAGW 135
+ G++G+RLTGAGW
Sbjct: 444 CSIALANGSFGSRLTGAGW 462
>sp|Q9ZB10|GAL1_STRTR Galactokinase OS=Streptococcus thermophilus GN=galK PE=3 SV=1
Length = 388
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 84 EEQKLQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGW 135
E L+ G LMN SH SL YE + LD+L T + + G GAR+TGAG+
Sbjct: 289 ETGDLEGFGRLMNASHVSLEYDYEVTGLELDTLAHTAWEQEGVLGARMTGAGF 341
>sp|Q5LYY7|GAL1_STRT1 Galactokinase OS=Streptococcus thermophilus (strain CNRZ 1066)
GN=galK PE=3 SV=1
Length = 388
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 84 EEQKLQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGW 135
E L+ G LMN SH SL YE + LD+L T + + G GAR+TGAG+
Sbjct: 289 EAGDLEGFGRLMNASHVSLEYDYEVTGLELDTLAHTAWEQEGVLGARMTGAGF 341
>sp|B6YST1|KIME_THEON Mevalonate kinase OS=Thermococcus onnurineus (strain NA1) GN=mvk
PE=3 SV=1
Length = 334
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 71 VERFLSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLVTCFREAGAYGARL 130
VE+ V S++ E + QLG LMN +H L S + L LV R AGA GA++
Sbjct: 228 VEKAKDVLLSELDNEVRFVQLGRLMNINH-GLLDALGVSTKKLSELVYAARTAGALGAKI 286
Query: 131 TGAGW 135
TGAG
Sbjct: 287 TGAGG 291
>sp|A4VT88|GAL1_STRSY Galactokinase OS=Streptococcus suis (strain 05ZYH33) GN=galK PE=3
SV=1
Length = 390
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 84 EEQKLQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGW 135
EE L G L+N SH SL YE + LD+L T + + G GAR+TGAG+
Sbjct: 289 EEGDLATFGRLVNASHVSLEHDYEVTGLELDTLAHTAWEQEGVLGARMTGAGF 341
>sp|Q49ZK2|GAL1_STAS1 Galactokinase OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=galK PE=3 SV=1
Length = 386
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 85 EQKLQQLGTLMNQSHTSLATKYECSHEALDSLVTCFREA-GAYGARLTGAGWC 136
+ +Q G L+N SH SL YE + LD+L ++ G GAR+TGAG+
Sbjct: 289 DNNFEQFGQLLNASHKSLKEDYEVTGIELDTLAETAQQVEGVLGARMTGAGFA 341
>sp|P39574|GAL1_BACSU Galactokinase OS=Bacillus subtilis (strain 168) GN=galK PE=3 SV=1
Length = 390
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 59 KSSHEIYLEAYRVERFLSVCRSDISEEQKLQQLGTLMNQSHTSLATKYECSHEALDSLV- 117
++ H +Y E ++ + + +E + ++G LM +SH SL YE + LD LV
Sbjct: 270 RAKHAVY------ENHRAIKTAHMFKENNIDEIGQLMKESHLSLKDDYEVTCPELDELVF 323
Query: 118 TCFREAGAYGARLTGAGW 135
+ G G+R+TGAG+
Sbjct: 324 AAWDHEGVIGSRMTGAGF 341
>sp|Q00052|GAL1_LACHE Galactokinase OS=Lactobacillus helveticus GN=galK PE=3 SV=1
Length = 388
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 84 EEQKLQQLGTLMNQSHTSLATKYECSHEALDSLV-TCFREAGAYGARLTGAGWCIS 138
++ L++LG L+N SH SL YE + + LD+L +++ G GAR+ G G+ S
Sbjct: 290 KDGDLEKLGRLINASHESLHYDYEVTGKELDTLAEASWKQPGVLGARMIGGGFGGS 345
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.131 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,465,539
Number of Sequences: 539616
Number of extensions: 2382050
Number of successful extensions: 6007
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 114
Number of HSP's that attempted gapping in prelim test: 5929
Number of HSP's gapped (non-prelim): 149
length of query: 196
length of database: 191,569,459
effective HSP length: 111
effective length of query: 85
effective length of database: 131,672,083
effective search space: 11192127055
effective search space used: 11192127055
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)