Query psy7891
Match_columns 929
No_of_seqs 408 out of 2847
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 21:27:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7891.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7891hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d2f_A Heat shock protein homo 100.0 9E-102 3E-106 933.5 70.7 646 25-781 2-653 (675)
2 4b9q_A Chaperone protein DNAK; 100.0 1.2E-92 4.1E-97 848.6 70.6 594 26-754 3-604 (605)
3 2kho_A Heat shock protein 70; 100.0 4.2E-91 1.4E-95 835.2 62.2 594 26-754 3-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 4.3E-85 1.5E-89 776.2 51.0 543 25-694 4-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 4.7E-76 1.6E-80 693.4 50.2 500 26-684 3-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 1.4E-61 4.7E-66 556.2 44.5 381 23-421 21-403 (404)
7 4gni_A Putative heat shock pro 100.0 1.2E-60 4.1E-65 549.1 43.5 379 24-423 12-405 (409)
8 3qfu_A 78 kDa glucose-regulate 100.0 4.2E-60 1.4E-64 542.1 44.9 375 25-420 18-394 (394)
9 1dkg_D Molecular chaperone DNA 100.0 2.2E-58 7.5E-63 525.8 40.8 376 26-420 3-383 (383)
10 1jce_A ROD shape-determining p 100.0 6.3E-40 2.1E-44 367.9 25.4 311 25-420 3-327 (344)
11 4e81_A Chaperone protein DNAK; 100.0 3.9E-28 1.3E-32 250.7 25.4 212 429-754 2-216 (219)
12 1u00_A HSC66, chaperone protei 100.0 5.2E-27 1.8E-31 244.9 26.2 211 431-755 1-214 (227)
13 2fsj_A Hypothetical protein TA 99.9 1.4E-26 4.8E-31 258.7 11.8 231 135-417 94-343 (346)
14 3h1q_A Ethanolamine utilizatio 99.9 9.8E-25 3.3E-29 236.0 22.7 203 139-416 70-272 (272)
15 2ych_A Competence protein PILM 99.9 7.9E-26 2.7E-30 256.5 14.3 319 25-417 13-373 (377)
16 1k8k_A ARP3, actin-like protei 99.9 4.6E-24 1.6E-28 245.3 17.3 242 142-417 89-386 (418)
17 2fxu_A Alpha-actin-1, actin, a 99.9 6.3E-24 2.1E-28 240.4 17.2 306 25-417 5-348 (375)
18 4a2a_A Cell division protein F 99.9 2.4E-22 8.2E-27 229.3 26.2 199 175-419 168-394 (419)
19 3n8e_A Stress-70 protein, mito 99.9 1.5E-21 5.1E-26 194.8 16.8 161 426-694 18-181 (182)
20 2zgy_A Plasmid segregation pro 99.8 1.7E-21 5.9E-26 215.6 10.8 227 134-416 72-319 (320)
21 3h0x_A 78 kDa glucose-regulate 99.8 3.2E-18 1.1E-22 166.4 16.0 148 430-684 2-152 (152)
22 3dob_A Heat shock 70 kDa prote 99.8 3.4E-18 1.2E-22 166.0 13.9 148 430-684 2-152 (152)
23 3dqg_A Heat shock 70 kDa prote 99.7 3.7E-18 1.3E-22 165.5 10.6 147 430-684 2-151 (151)
24 1k8k_B ARP2, actin-like protei 99.7 7.8E-19 2.7E-23 199.7 4.8 212 162-417 105-363 (394)
25 4ehu_A Activator of 2-hydroxyi 99.7 1.9E-17 6.4E-22 179.2 14.8 184 186-420 68-256 (276)
26 2op6_A Heat shock 70 kDa prote 99.7 9.4E-17 3.2E-21 156.9 14.8 148 430-684 2-152 (152)
27 3js6_A Uncharacterized PARM pr 99.7 4.2E-16 1.4E-20 173.9 14.3 210 162-421 114-339 (355)
28 4apw_A ALP12; actin-like prote 99.5 4E-14 1.4E-18 156.6 7.6 203 162-419 106-325 (329)
29 3dwl_A Actin-related protein 3 99.3 1.6E-12 5.3E-17 148.4 9.1 242 140-417 103-395 (427)
30 3qb0_A Actin-related protein 4 99.3 3.7E-11 1.3E-15 138.4 20.5 179 25-281 23-209 (498)
31 1q5l_A Chaperone protein DNAK; 99.3 2.5E-12 8.5E-17 122.3 7.8 102 425-549 14-118 (135)
32 3lof_A Heat shock 70 kDa prote 99.3 1.6E-11 5.4E-16 113.4 10.7 83 672-755 3-85 (113)
33 4fo0_A Actin-related protein 8 99.1 2.6E-09 8.8E-14 128.0 22.4 94 163-282 200-294 (593)
34 2p32_A Heat shock 70 kDa prote 99.0 3.4E-10 1.2E-14 105.4 6.1 82 672-754 12-93 (120)
35 2d0o_A DIOL dehydratase-reacti 98.9 1E-08 3.4E-13 115.3 14.5 197 174-418 367-604 (610)
36 1nbw_A Glycerol dehydratase re 98.9 9.8E-10 3.3E-14 123.9 6.3 194 176-417 371-605 (607)
37 1ud0_A HSC70, 70 kDa heat-shoc 98.9 8.3E-10 2.8E-14 101.9 4.5 79 676-755 2-80 (113)
38 1hux_A Activator of (R)-2-hydr 98.6 2.5E-06 8.4E-11 91.3 19.7 48 372-419 210-257 (270)
39 3ll3_A Gluconate kinase; xylul 98.2 2.1E-06 7.3E-11 100.2 10.5 202 182-423 220-445 (504)
40 3ezw_A Glycerol kinase; glycer 98.1 5.9E-06 2E-10 97.0 10.3 84 337-424 371-455 (526)
41 2ews_A Pantothenate kinase; PA 97.7 0.0014 4.9E-08 69.8 19.0 75 337-416 207-286 (287)
42 4am6_A Actin-like protein ARP8 97.6 0.00017 5.9E-09 84.0 11.5 116 140-282 197-318 (655)
43 3hz6_A Xylulokinase; xylulose, 97.2 0.0029 9.8E-08 73.8 14.1 209 182-423 224-455 (511)
44 3h3n_X Glycerol kinase; ATP-bi 96.9 0.0099 3.4E-07 69.1 15.3 82 337-423 372-455 (506)
45 4e1j_A Glycerol kinase; struct 96.8 0.0039 1.3E-07 72.8 11.2 83 338-423 393-477 (520)
46 2i7n_A Pantothenate kinase 1; 96.4 0.039 1.3E-06 60.3 14.7 47 371-417 306-359 (360)
47 3l0q_A Xylulose kinase; xlylul 96.1 0.0081 2.8E-07 70.7 8.3 85 335-423 407-494 (554)
48 2ivn_A O-sialoglycoprotein end 96.1 0.42 1.4E-05 52.0 21.4 65 349-418 228-298 (330)
49 2e2o_A Hexokinase; acetate and 96.1 0.97 3.3E-05 48.1 23.9 48 370-418 239-287 (299)
50 3vgl_A Glucokinase; ROK family 95.9 0.72 2.5E-05 49.8 22.1 45 187-237 96-140 (321)
51 3i8b_A Xylulose kinase; strain 95.9 0.015 5.1E-07 67.7 8.9 80 338-422 395-475 (515)
52 4db3_A Glcnac kinase, N-acetyl 95.8 1.1 3.6E-05 48.7 23.0 47 370-416 269-324 (327)
53 3g25_A Glycerol kinase; IDP007 95.8 0.017 5.9E-07 67.0 8.9 82 338-423 374-456 (501)
54 3ifr_A Carbohydrate kinase, FG 95.8 0.015 5.2E-07 67.6 8.4 81 338-423 371-452 (508)
55 4bc3_A Xylulose kinase; transf 95.8 0.016 5.6E-07 67.8 8.7 80 338-421 405-484 (538)
56 3vov_A Glucokinase, hexokinase 95.7 0.42 1.4E-05 51.2 18.8 48 370-417 237-294 (302)
57 2zf5_O Glycerol kinase; hypert 95.7 0.018 6.2E-07 66.8 8.4 53 370-423 393-445 (497)
58 3jvp_A Ribulokinase; PSI-II, N 95.6 0.018 6.2E-07 68.0 8.3 79 338-421 410-490 (572)
59 2itm_A Xylulose kinase, xylulo 95.5 0.015 5E-07 67.3 7.0 82 338-423 357-439 (484)
60 2p3r_A Glycerol kinase; glycer 95.5 0.022 7.5E-07 66.3 8.4 81 338-423 371-453 (510)
61 4htl_A Beta-glucoside kinase; 95.5 0.64 2.2E-05 49.7 19.2 49 370-418 237-291 (297)
62 3r8e_A Hypothetical sugar kina 95.3 0.18 6.3E-06 54.6 14.6 48 370-417 260-318 (321)
63 2ch5_A NAGK protein; transfera 95.3 4.2 0.00014 44.0 26.8 67 138-205 45-118 (347)
64 2d4w_A Glycerol kinase; alpha 95.2 0.041 1.4E-06 63.8 9.1 82 338-423 373-455 (504)
65 2qm1_A Glucokinase; alpha-beta 95.1 1.6 5.4E-05 47.0 21.1 49 371-419 263-322 (326)
66 2w40_A Glycerol kinase, putati 95.0 0.045 1.6E-06 63.5 8.9 82 338-423 376-459 (503)
67 2dpn_A Glycerol kinase; thermu 94.9 0.051 1.7E-06 62.9 8.8 81 338-422 368-449 (495)
68 2uyt_A Rhamnulokinase; rhamnos 94.9 0.051 1.7E-06 62.8 8.8 80 335-420 360-441 (489)
69 3lof_A Heat shock 70 kDa prote 94.7 0.12 4.1E-06 46.8 9.0 78 757-856 6-83 (113)
70 2gup_A ROK family protein; sug 94.6 1.5 5.2E-05 46.4 19.0 49 370-418 227-287 (292)
71 2ap1_A Putative regulator prot 93.8 1.8 6.2E-05 46.7 18.0 45 187-237 120-164 (327)
72 1t6c_A Exopolyphosphatase; alp 93.5 0.27 9.1E-06 53.2 10.2 75 179-275 102-177 (315)
73 2hoe_A N-acetylglucosamine kin 92.3 16 0.00053 40.2 23.1 48 370-417 314-370 (380)
74 4e81_A Chaperone protein DNAK; 91.8 1 3.5E-05 45.8 11.3 69 760-855 146-214 (219)
75 3eno_A Putative O-sialoglycopr 90.6 16 0.00055 39.4 20.2 67 349-420 233-305 (334)
76 1u00_A HSC66, chaperone protei 90.0 1.4 4.8E-05 45.0 10.5 71 758-855 141-211 (227)
77 3h6e_A Carbohydrate kinase, FG 90.0 0.25 8.5E-06 56.8 5.3 47 372-419 389-436 (482)
78 2p32_A Heat shock 70 kDa prote 89.1 1.3 4.4E-05 40.4 8.4 80 754-855 12-91 (120)
79 3bex_A Type III pantothenate k 88.5 2.8 9.4E-05 43.5 11.5 21 25-45 3-23 (249)
80 1ud0_A HSC70, 70 kDa heat-shoc 87.6 1.9 6.4E-05 38.7 8.4 72 762-855 6-77 (113)
81 3en9_A Glycoprotease, O-sialog 86.7 48 0.0016 38.2 22.1 42 349-395 232-273 (540)
82 3mdq_A Exopolyphosphatase; str 86.7 1.4 4.9E-05 47.3 8.4 55 179-237 94-149 (315)
83 2kho_A Heat shock protein 70; 83.7 2.3 7.9E-05 50.2 8.9 69 760-855 534-602 (605)
84 4b9q_A Chaperone protein DNAK; 83.7 4.8 0.00016 47.4 11.7 66 763-855 537-602 (605)
85 3cer_A Possible exopolyphospha 83.5 2 6.7E-05 46.9 7.6 57 179-237 107-164 (343)
86 1u6z_A Exopolyphosphatase; alp 83.3 4 0.00014 47.1 10.5 113 136-275 57-176 (513)
87 3hi0_A Putative exopolyphospha 83.1 3.4 0.00012 47.6 9.8 53 179-237 105-158 (508)
88 3uun_A Dystrophin; triple heli 80.7 29 0.00098 30.5 13.7 89 707-819 3-99 (119)
89 3uul_A Utrophin; spectrin repe 79.9 28 0.00096 30.6 13.0 89 707-819 3-99 (118)
90 3aap_A Ectonucleoside triphosp 78.8 2.8 9.6E-05 45.8 6.8 46 188-237 108-158 (353)
91 3o8m_A Hexokinase; rnaseh-like 78.5 31 0.0011 39.1 15.4 58 173-238 184-243 (485)
92 3d2f_A Heat shock protein homo 76.3 4.3 0.00015 48.5 7.9 75 760-856 551-625 (675)
93 2yhx_A Hexokinase B; transfera 75.0 13 0.00044 42.0 11.0 55 175-237 164-220 (457)
94 1iv0_A Hypothetical protein; r 74.5 2.8 9.5E-05 36.6 4.2 21 25-45 1-21 (98)
95 2aa4_A Mannac kinase, putative 74.1 20 0.00067 37.5 11.7 47 371-417 234-287 (289)
96 2yhw_A Bifunctional UDP-N-acet 73.0 41 0.0014 36.1 14.2 44 187-236 131-174 (343)
97 3epq_A Putative fructokinase; 71.1 22 0.00076 37.6 11.3 51 177-236 90-140 (302)
98 1woq_A Inorganic polyphosphate 70.9 84 0.0029 32.2 15.6 46 187-237 114-159 (267)
99 1z05_A Transcriptional regulat 69.5 32 0.0011 38.3 12.8 44 187-236 208-251 (429)
100 3qbx_A Anhydro-N-acetylmuramic 66.2 14 0.00048 40.2 8.3 69 346-419 262-337 (371)
101 3cqy_A Anhydro-N-acetylmuramic 65.1 14 0.00049 40.1 8.1 70 344-419 267-343 (370)
102 1z6r_A MLC protein; transcript 63.4 50 0.0017 36.3 12.7 44 187-236 186-229 (406)
103 3mcp_A Glucokinase; structural 61.1 59 0.002 35.4 12.4 23 23-45 7-29 (366)
104 1vhx_A Putative holliday junct 60.8 4.4 0.00015 38.4 2.8 21 25-45 3-23 (150)
105 3cj1_A Ectonucleoside triphosp 59.5 14 0.00046 41.8 7.0 20 218-237 189-208 (456)
106 4g9i_A Hydrogenase maturation 58.9 18 0.0006 43.7 8.2 66 353-423 693-764 (772)
107 1bdg_A Hexokinase; phosphotran 58.3 2.2E+02 0.0074 31.8 16.7 62 168-237 166-229 (451)
108 1zbs_A Hypothetical protein PG 58.2 71 0.0024 33.2 12.2 68 345-418 211-280 (291)
109 3ttc_A HYPF, transcriptional r 57.6 27 0.00091 41.2 9.2 65 349-418 583-651 (657)
110 1hjr_A Holliday junction resol 57.0 8.6 0.00029 36.7 4.1 19 25-43 1-19 (158)
111 3zx3_A Ectonucleoside triphosp 54.7 27 0.00093 39.2 8.3 59 176-237 130-199 (452)
112 3hm8_A Hexokinase-3; glucose, 51.3 2E+02 0.0069 32.0 14.6 61 169-237 155-218 (445)
113 3vth_A Hydrogenase maturation 49.8 25 0.00087 42.2 7.5 63 353-420 681-749 (761)
114 1nu0_A Hypothetical protein YQ 48.5 11 0.00038 35.0 3.3 20 26-45 4-23 (138)
115 3i8b_A Xylulose kinase; strain 47.9 12 0.00041 43.1 4.2 20 24-43 4-23 (515)
116 3ifr_A Carbohydrate kinase, FG 46.5 11 0.00039 43.2 3.7 21 25-45 7-27 (508)
117 3l0q_A Xylulose kinase; xlylul 44.3 14 0.00048 42.9 4.1 21 25-45 5-25 (554)
118 4bc3_A Xylulose kinase; transf 43.7 13 0.00045 43.0 3.7 21 25-45 10-30 (538)
119 3jvp_A Ribulokinase; PSI-II, N 43.4 14 0.00048 43.1 3.9 20 25-44 5-24 (572)
120 3h3n_X Glycerol kinase; ATP-bi 42.8 16 0.00055 41.8 4.2 21 25-45 5-25 (506)
121 2p3r_A Glycerol kinase; glycer 42.7 14 0.00046 42.5 3.5 21 25-45 3-23 (510)
122 4ep4_A Crossover junction endo 42.4 16 0.00055 35.1 3.4 21 25-45 1-21 (166)
123 3nmd_A CGMP dependent protein 42.3 62 0.0021 26.2 6.2 45 658-704 27-71 (72)
124 1cza_N Hexokinase type I; stru 42.0 1E+02 0.0035 38.0 11.5 57 173-237 630-689 (917)
125 2w40_A Glycerol kinase, putati 41.4 15 0.00051 42.1 3.7 20 26-45 5-24 (503)
126 2uyt_A Rhamnulokinase; rhamnos 41.3 14 0.00046 42.2 3.3 20 25-44 4-23 (489)
127 3h6e_A Carbohydrate kinase, FG 40.9 13 0.00043 42.4 2.9 20 26-45 7-26 (482)
128 3g25_A Glycerol kinase; IDP007 40.9 15 0.00052 42.0 3.6 21 25-45 6-26 (501)
129 3f9m_A Glucokinase; hexokinase 40.7 3.4E+02 0.012 30.4 14.4 58 172-237 182-242 (470)
130 3ven_A O-carbamoyltransferase 39.9 39 0.0013 39.1 6.8 65 352-421 294-360 (576)
131 3hz6_A Xylulokinase; xylulose, 39.9 16 0.00055 41.9 3.6 20 26-45 6-25 (511)
132 3djc_A Type III pantothenate k 39.7 17 0.00057 37.9 3.3 20 26-45 3-22 (266)
133 2dpn_A Glycerol kinase; thermu 39.6 15 0.00052 41.9 3.3 20 26-45 3-22 (495)
134 2nr5_A Hypothetical protein SO 39.6 1.1E+02 0.0037 22.8 6.6 37 690-726 28-64 (67)
135 2zf5_O Glycerol kinase; hypert 39.3 16 0.00056 41.6 3.5 20 26-45 4-23 (497)
136 4e1j_A Glycerol kinase; struct 38.9 16 0.00054 42.1 3.3 20 26-45 27-46 (520)
137 2itm_A Xylulose kinase, xylulo 38.5 16 0.00056 41.5 3.3 19 27-45 2-20 (484)
138 1hnj_A Beta-ketoacyl-acyl carr 38.2 30 0.001 36.6 5.2 46 347-395 214-259 (317)
139 2d4w_A Glycerol kinase; alpha 37.2 19 0.00066 41.1 3.7 20 26-45 3-22 (504)
140 2aa4_A Mannac kinase, putative 35.9 44 0.0015 34.7 6.0 44 187-237 96-139 (289)
141 3uul_A Utrophin; spectrin repe 35.4 72 0.0025 27.7 6.6 25 799-823 3-27 (118)
142 1saz_A Probable butyrate kinas 33.8 38 0.0013 37.1 5.3 48 370-417 295-347 (381)
143 2ebd_A 3-oxoacyl-[acyl-carrier 32.1 39 0.0013 35.5 4.8 45 348-395 207-251 (309)
144 3htv_A D-allose kinase, alloki 31.9 92 0.0032 32.8 7.8 48 370-417 239-298 (310)
145 3cet_A Conserved archaeal prot 31.2 25 0.00085 37.6 3.0 70 338-415 244-321 (334)
146 1ub7_A 3-oxoacyl-[acyl-carrier 30.8 38 0.0013 35.9 4.5 45 348-395 217-261 (322)
147 3uun_A Dystrophin; triple heli 30.4 96 0.0033 26.9 6.5 26 798-823 2-27 (119)
148 1mzj_A Beta-ketoacylsynthase I 29.5 57 0.0019 34.8 5.7 44 349-395 229-272 (339)
149 3f31_A Spectrin alpha chain, b 28.8 3.4E+02 0.012 24.8 13.6 109 678-818 26-140 (149)
150 3f9m_A Glucokinase; hexokinase 28.5 1.2E+02 0.0041 34.1 8.2 22 218-239 76-97 (470)
151 3o8m_A Hexokinase; rnaseh-like 27.7 1.4E+02 0.0047 33.8 8.5 22 218-239 79-100 (485)
152 1zow_A 3-oxoacyl-[acyl-carrier 27.3 58 0.002 34.2 5.2 45 348-395 209-253 (313)
153 3kbt_A Beta-I spectrin, spectr 27.1 5.3E+02 0.018 26.5 16.1 48 800-848 112-159 (326)
154 1zc6_A Probable N-acetylglucos 26.2 34 0.0012 36.0 3.1 64 345-417 227-292 (305)
155 2h3g_X Biosynthetic protein; p 25.6 40 0.0014 35.0 3.3 19 27-45 2-20 (268)
156 2x3e_A 3-oxoacyl-[acyl-carrier 25.0 73 0.0025 33.8 5.5 44 349-395 222-265 (331)
157 1zc6_A Probable N-acetylglucos 25.0 48 0.0016 34.8 4.0 56 162-231 77-134 (305)
158 1msz_A DNA-binding protein smu 24.8 56 0.0019 27.6 3.4 28 164-191 34-61 (86)
159 4ewp_A 3-oxoacyl-[acyl-carrier 24.6 92 0.0032 33.3 6.3 45 352-396 65-111 (350)
160 1kae_A HDH, histidinol dehydro 24.2 1E+02 0.0034 34.1 6.2 45 160-208 153-198 (434)
161 1zbs_A Hypothetical protein PG 23.9 20 0.00068 37.6 0.7 45 160-205 59-105 (291)
162 3epq_A Putative fructokinase; 23.1 1.3E+02 0.0044 31.6 6.9 48 370-417 224-288 (302)
163 3r6n_A Desmoplakin; spectrin r 22.8 8E+02 0.027 27.1 19.0 52 798-849 199-252 (450)
164 2a01_A Apolipoprotein A-I; fou 22.3 1.4E+02 0.0047 30.4 6.6 74 673-747 109-187 (243)
165 3r6n_A Desmoplakin; spectrin r 22.2 5.3E+02 0.018 28.6 12.0 49 799-848 94-142 (450)
166 1d7m_A Cortexillin I; coiled-c 22.0 1.4E+02 0.0049 24.9 5.2 60 712-776 3-62 (101)
167 3iee_A Putative exported prote 21.8 6.5E+02 0.022 25.7 15.7 95 706-808 170-266 (270)
168 1zxo_A Conserved hypothetical 21.8 38 0.0013 35.4 2.3 68 346-417 210-277 (291)
169 4gic_A HDH, histidinol dehydro 21.4 90 0.0031 34.3 5.1 49 160-209 159-208 (423)
170 3edu_A Beta-I spectrin, spectr 21.3 5E+02 0.017 25.1 10.7 23 799-821 109-131 (218)
171 1u6e_A 3-oxoacyl-[acyl-carrier 20.4 83 0.0029 33.3 4.8 44 349-395 230-273 (335)
172 2yhx_A Hexokinase B; transfera 20.3 2.3E+02 0.008 31.6 8.6 22 218-239 60-81 (457)
173 2ra1_A Surface layer protein; 20.1 1.4E+02 0.0049 32.1 6.2 122 711-851 103-228 (412)
No 1
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=8.9e-102 Score=933.47 Aligned_cols=646 Identities=25% Similarity=0.429 Sum_probs=553.7
Q ss_pred CeEEEEEcCccceEEEEEECCCceEEeeCCCCCccceEEEEEecCceeecHHHHHhhhhCCCChHhhhHHhcCCCCCCHH
Q psy7891 25 IAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDSPV 104 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~g~~~~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~t~~~~K~llG~~~~d~~ 104 (929)
|++||||||||||+||++.+| +++++.|..|+|.+||+|+|.+++++||..|..++.++|.++++++|||||+.++|+.
T Consensus 2 m~~iGIDlGTtns~va~~~~g-~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 80 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNR-GIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPD 80 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETT-EEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTT
T ss_pred CcEEEEEcCCCcEEEEEEECC-eeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHH
Confidence 468999999999999999988 7889999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcCCceeeecCCCcceEEEEc--CC-ceeeeHHHHHHHHHHHHHHHHHhhcccccceEEEEecCCCCHHHHHHHH
Q psy7891 105 VQLFKSRFPYYDIVADEERGTIVFKT--ND-NELYHVEELVAMLLHKAREYASVSAGQVINEAVIIVPGYFNQIERQSML 181 (929)
Q Consensus 105 v~~~~~~~p~~~~~~~~~~~~v~~~~--~~-~~~~~~eel~a~~L~~lk~~a~~~~~~~v~~~VItVPa~f~~~qR~al~ 181 (929)
++...+++||..+...+ |.+.+.+ .+ ...|+|+++++++|++|++.|+.++|.++.++|||||+||++.||++++
T Consensus 81 v~~~~~~~p~~v~~~~~--g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~ 158 (675)
T 3d2f_A 81 FEQESKHFTSKLVELDD--KKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIA 158 (675)
T ss_dssp HHHHHTTCCSEEEECTT--SBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHH
T ss_pred HHHHHhhCCeeEEEcCC--CceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHH
Confidence 99999999996554333 3343332 23 4679999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEEEEechhHHHHHHhcccccccCC---CCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEE
Q psy7891 182 KAGELAGLKVLQLMNDYTAVALNYGIFKRKDFN---ETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVL 258 (929)
Q Consensus 182 ~Aa~~AGl~~~~li~EptAAAl~y~~~~~~~~~---~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~ 258 (929)
+|+++|||++++||+||+|||++|++.+.. ++ .. +.++||||+||||||+||+++. .| .++|+
T Consensus 159 ~Aa~~AGl~~~~li~EP~AAAlaygl~~~~-~~~~~~~-~~~vlV~DlGGGT~Dvsv~~~~------~g------~~~V~ 224 (675)
T 3d2f_A 159 DAARIAGLNPVRIVNDVTAAGVSYGIFKTD-LPEGEEK-PRIVAFVDIGHSSYTCSIMAFK------KG------QLKVL 224 (675)
T ss_dssp HHHHHTTCEEEEEEEHHHHHHHHHHHHCSC-CCCSSSC-CEEEEEEEECSSCEEEEEEEEE------TT------EEEEE
T ss_pred HHHHHcCCceEEEEcchHHHHHHHhhhccc-cccccCC-CcEEEEEEcCCCcEEEEEEEec------CC------eEEEE
Confidence 999999999999999999999999987632 21 23 7899999999999999999986 24 78999
Q ss_pred EEecCCCcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccCCCceeEEEeecccCcceEEEEe
Q psy7891 259 GVGYDRTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSANNEHFAQIEGLIDEIDFKLLVT 338 (929)
Q Consensus 259 ~~~~d~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~v~ie~l~~~~d~~~~it 338 (929)
+++|+..+||++||.+|++||.++|..+ ++.++..+++++.||+.+||++|+.||.+.++.+.|++++++.++.+.||
T Consensus 225 a~~gd~~lGG~d~D~~l~~~l~~~f~~~--~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~it 302 (675)
T 3d2f_A 225 GTACDKHFGGRDFDLAITEHFADEFKTK--YKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLS 302 (675)
T ss_dssp EEEEETTCSHHHHHHHHHHHHHHHHHHH--TSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEE
T ss_pred EEcCCCCccHHHHHHHHHHHHHHHHHHH--hCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEe
Confidence 9999999999999999999999999884 45688889999999999999999999999988899999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHHHh
Q psy7891 339 RAEFEALNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYKAAD 418 (929)
Q Consensus 339 R~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~aa~ 418 (929)
|++|+++|.++++++..+|+++|+.+++...+|+.|+||||+||+|+|++.|+++||..+..++||++|||+|||++|+.
T Consensus 303 r~~fe~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ 382 (675)
T 3d2f_A 303 REELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAI 382 (675)
T ss_dssp HHHHHHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred hcCCcccceeEEEEeeecceEEeeeccccCCCcceeEEEEecCCCccCceEEEEEEeccCceEEEEEeccCcCcCChhhh
Q psy7891 419 LSTGFKVKKFITKDIVLYPIQVEFERESESGDTKIIKRMLFGPSNTYPQKKILTFNKYVGDFNFNVSYASEIEHLNPEQI 498 (929)
Q Consensus 419 ~s~~f~~k~~~v~d~~~~~i~i~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~~~~i~i~~g~~~~~~~~~~~ 498 (929)
+++.|+++++.+.|++||+|||+|.+..+ ...+.+||++|++||++++.+|++. .++.+.++|..+.. ++..+
T Consensus 383 ls~~~~v~~~~l~Dv~p~slgi~~~~~~~----~~~~~~li~rnt~iP~~k~~~f~~~-~~~~~~~~~~ge~~-~~~~~- 455 (675)
T 3d2f_A 383 HSPTLRVRPFKFEDIHPYSVSYSWDKQVE----DEDHMEVFPAGSSFPSTKLITLNRT-GDFSMAASYTDITQ-LPPNT- 455 (675)
T ss_dssp TCSSCCCCCCEEEEEECSCEEEEECCTTC----SCSEEEEECTTEEESEEEEEEEEES-SCEEEEEEESCGGG-SCTTC-
T ss_pred hCCCCcccceEEEeeeecceEeeecCCCC----CcceEEEEcCCCCCCcccceeeeec-CCceEEEEEcCCcc-ccccc-
Confidence 99999999999999999999999974321 1137899999999999999999987 78899997741433 33223
Q ss_pred ccccceeeeeEEecCCcccccCCCccccCCCceEEEEEeCCCccEEEEEeeeEEeccccccCccccccccccccccCCCC
Q psy7891 499 AMLGTKQISKFDVSGVSEAFGKHNEENAESKGIKAHFAMDESGILSLVNIELVVEKQEAAESPLSKLGNTLTSLFSRSKT 578 (929)
Q Consensus 499 ~~~g~~~i~~~~i~gi~~~~~~~~~~~~~~~~i~v~f~ld~~Gil~v~~~e~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 578 (929)
+..|++|.|.||++++.+. +++|+|+|.+|.||+|+|++++++++... +
T Consensus 456 ----n~~lg~f~l~gi~~~~~g~------~~~i~v~f~id~~Gil~V~a~~~~~~~~~--~------------------- 504 (675)
T 3d2f_A 456 ----PEQIANWEITGVQLPEGQD------SVPVKLKLRCDPSGLHTIEEAYTIEDIEA--G------------------- 504 (675)
T ss_dssp ----CSEEEEEEEECCCCCSSCS------CEEEEEEEEECTTSCEEEEEEEEECC-------------------------
T ss_pred ----CceeeEEEecCcCCCCCCC------cceEEEEEEEcCCCcEEEEEEEEeecccc--c-------------------
Confidence 3456777999999875443 25899999999999999999876532100 0
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCchhhhhhhhhhhccCCCCCCCCCCCceeeeeccceeeEeecCCCCCCHHHHHH
Q psy7891 579 DENEKPINEAVDEGNKTAEEPSKNVNSTESQQQSAEESVKNATQTPDADKKPKIVTVKEPISASETRYGVSTLNEKQVEK 658 (929)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~v~~~~~~~~~ls~~ei~~ 658 (929)
+.|...++..|+|+.. ..+||++++++
T Consensus 505 --------------------------------------------------~~~~t~~~~~i~i~~~---~~~ls~~ei~~ 531 (675)
T 3d2f_A 505 --------------------------------------------------SDTKTVKKDDLTIVAH---TFGLDAKKLNE 531 (675)
T ss_dssp ----------------------------------------------------CCCCEEEECEEEEE---CSSCCHHHHHH
T ss_pred --------------------------------------------------ccccCcceeeEEEecC---CCCCCHHHHHH
Confidence 0000111223444322 23799999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHhhhchhhhccCCChhHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHH
Q psy7891 659 SLSKLDSLNQIEHAKVRKEKALNSLESLLFDAKSKLELEEYSSVAAPNESKTIVDKIDEITNWLEEDGWNAEADVLENKL 738 (929)
Q Consensus 659 ~~~~l~~~~~~D~~~~~~~eakN~LEs~iy~~r~~L~~~~~~~~~~~~er~~l~~~l~e~~~WL~~d~~~a~~~~~~~kl 738 (929)
+++++.+|..+|+.++++.+++|+||+|+|++|++|+ +++.+++++++|++|...|+++++|||++++++++++|++|+
T Consensus 532 ~~~~~~~~~~~D~~~~~~~~~~n~le~~i~~~~~~l~-~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~ 610 (675)
T 3d2f_A 532 LIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLE-EEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKY 610 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHH
Confidence 9999999999999999999999999999999999997 468899999999999999999999999888889999999999
Q ss_pred HHHHhchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhc
Q psy7891 739 NEINSLVVPIWERHREHQERPEALKSLNNALNVSVTFYNSIKN 781 (929)
Q Consensus 739 ~eL~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~~~~ 781 (929)
++|+++++||..|++++..||.+++.|++.|++++.++..+..
T Consensus 611 ~~l~~~~~~i~~r~~e~~~rp~~~~~~~~~~~~~~~~~~~~~~ 653 (675)
T 3d2f_A 611 EELASLGNIIRGRYLAKEEEKKQAIRSKQEASQMAAMAEKLAA 653 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC-----------------
T ss_pred HHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988643
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=1.2e-92 Score=848.57 Aligned_cols=594 Identities=26% Similarity=0.395 Sum_probs=529.3
Q ss_pred eEEEEEcCccceEEEEEECCCceEEeeCCCCCccceEEEEEe-cCceeecHHHHHhhhhCCCChHhhhHHhcCCCCCCHH
Q psy7891 26 AVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFH-KGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDSPV 104 (929)
Q Consensus 26 ~vvGID~GTt~s~va~~~~g~~~~iv~n~~~~r~~PS~V~~~-~~~~~~G~~A~~~~~~~p~~t~~~~K~llG~~~~d~~ 104 (929)
.|||||||||||+||++.+| .++++.|..|.|++||+|+|. ++++++|..|..++.++|.++++++|||||+.++++.
T Consensus 3 ~viGIDlGTT~S~Va~~~~g-~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 81 (605)
T 4b9q_A 3 KIIGIDLGTTNSCVAIMDGT-TPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp CEEEEECCSSEEEEEEEETT-EEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHH
T ss_pred cEEEEEcCCCcEEEEEEECC-EEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHH
Confidence 58999999999999999988 778999999999999999996 5689999999999999999999999999999999999
Q ss_pred HHhhhhcCCceeeecCCCcceEEEEcCCceeeeHHHHHHHHHHHHHHHHHhhcccccceEEEEecCCCCHHHHHHHHHHH
Q psy7891 105 VQLFKSRFPYYDIVADEERGTIVFKTNDNELYHVEELVAMLLHKAREYASVSAGQVINEAVIIVPGYFNQIERQSMLKAG 184 (929)
Q Consensus 105 v~~~~~~~p~~~~~~~~~~~~v~~~~~~~~~~~~eel~a~~L~~lk~~a~~~~~~~v~~~VItVPa~f~~~qR~al~~Aa 184 (929)
++.+.+++||..+... .+.+.+.+++ ..++|+++++++|++|++.++.++|.++.++|||||+||++.||+++++||
T Consensus 82 v~~~~~~~p~~~~~~~--~g~~~~~~~~-~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa 158 (605)
T 4b9q_A 82 VQRDVSIMPFKIIAAD--NGDAWVEVKG-QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHHTTCSSEEEECT--TSBEEEEETT-EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcC--CCceEEEECC-EEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 9999999999765543 3556666665 689999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEEEEecCC
Q psy7891 185 ELAGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVGYDR 264 (929)
Q Consensus 185 ~~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~~d~ 264 (929)
++|||+++++|+||+|||++|++..... +.++||||+||||||+|++++.... ..+.+++++++++.
T Consensus 159 ~~AGl~v~~li~EP~AAAlaygl~~~~~-----~~~vlV~DlGGGT~Dvsi~~~~~~~--------~~~~~evla~~gd~ 225 (605)
T 4b9q_A 159 RIAGLEVKRIINEPTAAALAYGLDKGTG-----NRTIAVYDLGGGAFDISIIEIDEVD--------GEKTFEVLATNGDT 225 (605)
T ss_dssp HHTTCEEEEEEEHHHHHHHHHHTTSCCS-----SEEEEEEEECSSCEEEEEEEEEESS--------SCEEEEEEEEEEET
T ss_pred HHcCCceEEEeCcHHHHHHHhhhhccCC-----CCEEEEEECCCCeEEEEEEEEecCC--------CCceEEEEEecCCC
Confidence 9999999999999999999999876432 6899999999999999999986211 12489999999999
Q ss_pred CcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccCCCceeEEEeecccC----cceEEEEeHH
Q psy7891 265 TLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSANNEHFAQIEGLIDE----IDFKLLVTRA 340 (929)
Q Consensus 265 ~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~v~ie~l~~~----~d~~~~itR~ 340 (929)
.+||.+||.+|++||.++|.. +.+.++..+++++.+|+.+||++|+.||.+..+.+.++.+..+ .++.+.|||+
T Consensus 226 ~lGG~d~D~~l~~~l~~~f~~--~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~ 303 (605)
T 4b9q_A 226 HLGGEDFDSRLINYLVEEFKK--DQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRA 303 (605)
T ss_dssp TCSHHHHHHHHHHHHHHHHHH--HTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHH
T ss_pred CcChHHHHHHHHHHHHHHHhh--hcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHH
Confidence 999999999999999999998 4456888899999999999999999999999999999887654 6789999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHHHhhc
Q psy7891 341 EFEALNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYKAADLS 420 (929)
Q Consensus 341 efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~aa~~s 420 (929)
+|+++|.++++++..+|+++|+.+++...+|+.|+||||+||+|+|++.|+++||.++..++||++|||+|||++|+.++
T Consensus 304 ~~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~ 383 (605)
T 4b9q_A 304 KLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (605)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccceeEEEEeeecceEEeeeccccCCCcceeEEEEecCCCccCceEEEEEEeccCc---eEEEEEeccCcCcCChhh
Q psy7891 421 TGFKVKKFITKDIVLYPIQVEFERESESGDTKIIKRMLFGPSNTYPQKKILTFNKYVGD---FNFNVSYASEIEHLNPEQ 497 (929)
Q Consensus 421 ~~f~~k~~~v~d~~~~~i~i~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~~---~~i~i~~g~~~~~~~~~~ 497 (929)
+. ++++.+.|++|++|||++. ++ .+.+||++|++||++++.+|++..++ +.|.|||| ++... .+
T Consensus 384 ~~--~~~~~l~dv~p~slgie~~-----~g---~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~g-e~~~~--~~ 450 (605)
T 4b9q_A 384 GD--VKDVLLLDVTPLSLGIETM-----GG---VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQG-ERKRA--AD 450 (605)
T ss_dssp TS--SCSEEEECBCSSCEEEEET-----TT---EEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEES-SCSBG--GG
T ss_pred CC--CCceEEEeeeeeEEEEEEc-----CC---EEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEec-ccccc--cc
Confidence 87 5789999999999999886 33 37899999999999999999887553 89999999 87633 24
Q ss_pred hccccceeeeeEEecCCcccccCCCccccCCCceEEEEEeCCCccEEEEEeeeEEeccccccCccccccccccccccCCC
Q psy7891 498 IAMLGTKQISKFDVSGVSEAFGKHNEENAESKGIKAHFAMDESGILSLVNIELVVEKQEAAESPLSKLGNTLTSLFSRSK 577 (929)
Q Consensus 498 ~~~~g~~~i~~~~i~gi~~~~~~~~~~~~~~~~i~v~f~ld~~Gil~v~~~e~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 577 (929)
|. .|++|.+.||++++++. ++|+|+|++|.||+|+|++.+ .+|+
T Consensus 451 n~-----~lg~~~l~~i~~~~~g~-------~~i~v~f~id~~gil~v~a~~---------~~tg--------------- 494 (605)
T 4b9q_A 451 NK-----SLGQFNLDGINPAPRGM-------PQIEVTFDIDADGILHVSAKD---------KNSG--------------- 494 (605)
T ss_dssp SE-----EEEEEEEECCCCCSTTC-------CCEEEEEEECTTSCEEEEEEE---------TTTC---------------
T ss_pred CC-----EeeEEEEeCCCCCcCCC-------ceEEEEEEEcCCcEEEEEEEe---------cCCC---------------
Confidence 44 45667889999887665 689999999999999999874 1110
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCchhhhhhhhhhhccCCCCCCCCCCCceeeeeccceeeEeecCCCCCCHHHHH
Q psy7891 578 TDENEKPINEAVDEGNKTAEEPSKNVNSTESQQQSAEESVKNATQTPDADKKPKIVTVKEPISASETRYGVSTLNEKQVE 657 (929)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~v~~~~~~~~~ls~~ei~ 657 (929)
|+ ..+.++ ....||++|++
T Consensus 495 -----------------------------------------------------~~----~~i~i~----~~~~ls~~ei~ 513 (605)
T 4b9q_A 495 -----------------------------------------------------KE----QKITIK----ASSGLNEDEIQ 513 (605)
T ss_dssp -----------------------------------------------------CE----ECCEEE----SCCSCCHHHHH
T ss_pred -----------------------------------------------------cE----EEEEec----CCCCCCHHHHH
Confidence 00 012222 12469999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHhhhchhhhccCCChhHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHH
Q psy7891 658 KSLSKLDSLNQIEHAKVRKEKALNSLESLLFDAKSKLELEEYSSVAAPNESKTIVDKIDEITNWLEEDGWNAEADVLENK 737 (929)
Q Consensus 658 ~~~~~l~~~~~~D~~~~~~~eakN~LEs~iy~~r~~L~~~~~~~~~~~~er~~l~~~l~e~~~WL~~d~~~a~~~~~~~k 737 (929)
+|++.+++|..+|+.++++.++||+||+|+|++|..|+ ++.+++++++|+.|...++++++||+.+ ++++|+++
T Consensus 514 ~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~ 587 (605)
T 4b9q_A 514 KMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVE--EAGDKLPADDKTAIESALTALETALKGE----DKAAIEAK 587 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHGGGSCHHHHHHHHHHHHHHHHHHHSS----CHHHHHHH
T ss_pred HHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhhhCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHH
Confidence 99999999999999999999999999999999999995 5788999999999999999999999953 58999999
Q ss_pred HHHHHhchhhHHHHHHh
Q psy7891 738 LNEINSLVVPIWERHRE 754 (929)
Q Consensus 738 l~eL~~~~~pi~~R~~e 754 (929)
+++|++.+.||..++++
T Consensus 588 ~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 588 MQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998764
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=4.2e-91 Score=835.25 Aligned_cols=594 Identities=26% Similarity=0.392 Sum_probs=523.9
Q ss_pred eEEEEEcCccceEEEEEECCCceEEeeCCCCCccceEEEEE-ecCceeecHHHHHhhhhCCCChHhhhHHhcCCCCCCHH
Q psy7891 26 AVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAF-HKGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDSPV 104 (929)
Q Consensus 26 ~vvGID~GTt~s~va~~~~g~~~~iv~n~~~~r~~PS~V~~-~~~~~~~G~~A~~~~~~~p~~t~~~~K~llG~~~~d~~ 104 (929)
.+||||||||||+||++.+| .++++.|..|.|++||+|+| .+++++||..|..+...+|.++++++|||||+.++++.
T Consensus 3 ~viGIDlGTt~s~va~~~~g-~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~ 81 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGT-TPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp -CEEEECCSSEEEEEEEETT-EEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTT
T ss_pred CEEEEEcCCcCEEEEEEECC-EEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHH
Confidence 48999999999999999988 78899999999999999999 46789999999999999999999999999999999999
Q ss_pred HHhhhhcCCceeeecCCCcceEEEEcCCceeeeHHHHHHHHHHHHHHHHHhhcccccceEEEEecCCCCHHHHHHHHHHH
Q psy7891 105 VQLFKSRFPYYDIVADEERGTIVFKTNDNELYHVEELVAMLLHKAREYASVSAGQVINEAVIIVPGYFNQIERQSMLKAG 184 (929)
Q Consensus 105 v~~~~~~~p~~~~~~~~~~~~v~~~~~~~~~~~~eel~a~~L~~lk~~a~~~~~~~v~~~VItVPa~f~~~qR~al~~Aa 184 (929)
++...+++||..+... .+.+.+.+++ ..++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++|+
T Consensus 82 v~~~~~~~p~~~~~~~--~g~~~i~~~g-~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~ 158 (605)
T 2kho_A 82 VQRDVSIMPFKIIAAD--NGDAWVEVKG-QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHHHHCSSCEEECT--TSBEEEEETT-EEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEECC--CCceEEEECC-EEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHH
Confidence 9988889998654333 3455666654 689999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEEEEecCC
Q psy7891 185 ELAGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVGYDR 264 (929)
Q Consensus 185 ~~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~~d~ 264 (929)
++|||++++||+||+|||++|++.... . +.++||||+||||||+|++++.... ..+.++|+++.|+.
T Consensus 159 ~~AGl~v~~li~EP~AAAlay~l~~~~----~-~~~vlV~DlGGGT~Dvsi~~~~~~~--------~~g~~~v~a~~gd~ 225 (605)
T 2kho_A 159 RIAGLEVKRIINEPTAAALAYGLDKGT----G-NRTIAVYDLGGGTFDISIIEIDEVD--------GEKTFEVLATNGDT 225 (605)
T ss_dssp HTTTCEEEEEEEHHHHHHHHTTTTSSS----S-EEEEEEEEECSSCEEEEEEEEECTT--------TSCEEEEEEEEEES
T ss_pred HHcCCceEEEecCHHHHHHHhhhcccC----C-CCEEEEEECCCCeEEEEEEEEEecC--------CCCeEEEEEECCCC
Confidence 999999999999999999999986532 2 6899999999999999999975111 02379999999999
Q ss_pred CcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccCCCceeEEEeecccC----cceEEEEeHH
Q psy7891 265 TLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSANNEHFAQIEGLIDE----IDFKLLVTRA 340 (929)
Q Consensus 265 ~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~v~ie~l~~~----~d~~~~itR~ 340 (929)
.+||.+||..|++||.++|..+ ++.++..+++++.+|+.+||++|+.||.+.++.+.++++.++ .++.++|||+
T Consensus 226 ~lGG~d~D~~l~~~l~~~~~~~--~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~ 303 (605)
T 2kho_A 226 HLGGEDFDSRLINYLVEEFKKD--QGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRA 303 (605)
T ss_dssp SCSGGGTHHHHHHHHHHHHHHH--HSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHH
T ss_pred CccHHHHHHHHHHHHHHHHHHH--hCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHH
Confidence 9999999999999999999884 445788899999999999999999999999888999887753 5788899999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHHHhhc
Q psy7891 341 EFEALNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYKAADLS 420 (929)
Q Consensus 341 efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~aa~~s 420 (929)
+|+++|+++++++..+|+++|+.+++...+|+.|+||||+||+|+|++.|+++||..+..++||++|||+|||++|+.++
T Consensus 304 ~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~ 383 (605)
T 2kho_A 304 KLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (605)
T ss_dssp HHHTTCCSTTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999998889999999999999999999998
Q ss_pred CCcccceeEEEEeeecceEEeeeccccCCCcceeEEEEecCCCccCceEEEEEEeccCc---eEEEEEeccCcCcCChhh
Q psy7891 421 TGFKVKKFITKDIVLYPIQVEFERESESGDTKIIKRMLFGPSNTYPQKKILTFNKYVGD---FNFNVSYASEIEHLNPEQ 497 (929)
Q Consensus 421 ~~f~~k~~~v~d~~~~~i~i~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~~---~~i~i~~g~~~~~~~~~~ 497 (929)
+. ++++.+.|++|+++|+++. ++ .+.+||++|+++|.+++.+|++..++ +.|.||+| +.... .+
T Consensus 384 ~~--~~~~~l~dv~p~slgi~~~-----~g---~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~g-e~~~~--~~ 450 (605)
T 2kho_A 384 GD--VKDVLLLDVTPLSLGIETM-----GG---VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQG-ERKRA--AD 450 (605)
T ss_dssp TS--CCCCCCSBCCCCCEEEEET-----TT---EEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEES-SCSBG--GG
T ss_pred CC--ccCceEEeeeeeecccccc-----CC---ceEEEEecccccCccceEEEEecCCCceEEEEEEEec-cCccc--cc
Confidence 76 6889999999999999986 22 37899999999999999999886543 89999999 76532 24
Q ss_pred hccccceeeeeEEecCCcccccCCCccccCCCceEEEEEeCCCccEEEEEeeeEEeccccccCccccccccccccccCCC
Q psy7891 498 IAMLGTKQISKFDVSGVSEAFGKHNEENAESKGIKAHFAMDESGILSLVNIELVVEKQEAAESPLSKLGNTLTSLFSRSK 577 (929)
Q Consensus 498 ~~~~g~~~i~~~~i~gi~~~~~~~~~~~~~~~~i~v~f~ld~~Gil~v~~~e~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 577 (929)
+. .|++|.+.|+++++++. ++|+|+|.+|.||+|+|++.+. .+.
T Consensus 451 n~-----~lg~~~l~~i~~~~~g~-------~~i~v~f~id~~gil~v~a~~~---------~tg--------------- 494 (605)
T 2kho_A 451 NK-----SLGQFNLDGINPAPRGM-------PQIEVTFDIDADGILHVSAKDK---------NSG--------------- 494 (605)
T ss_dssp SE-----EEEEEEEECCCSCCTTC-------SCEEEEEEECTTSCEEEEEEET---------TTC---------------
T ss_pred Cc-----EEeEEEecCCCCCCCCC-------cEEEEEEEEcCCCceeEEEEEc---------CCC---------------
Confidence 43 46677899999876554 6899999999999999998641 100
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCchhhhhhhhhhhccCCCCCCCCCCCceeeeeccceeeEeecCCCCCCHHHHH
Q psy7891 578 TDENEKPINEAVDEGNKTAEEPSKNVNSTESQQQSAEESVKNATQTPDADKKPKIVTVKEPISASETRYGVSTLNEKQVE 657 (929)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~v~~~~~~~~~ls~~ei~ 657 (929)
+.. .+.++ .. .+||+++++
T Consensus 495 -----------------------------------------------------~~~----~i~i~---~~-~~ls~~~i~ 513 (605)
T 2kho_A 495 -----------------------------------------------------KEQ----KITIK---AS-SGLNEDEIQ 513 (605)
T ss_dssp -----------------------------------------------------CEE----EEEEC---TT-SSCCHHHHH
T ss_pred -----------------------------------------------------cee----ecccc---cc-cCCCHHHHH
Confidence 000 12221 12 679999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHhhhchhhhccCCChhHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHH
Q psy7891 658 KSLSKLDSLNQIEHAKVRKEKALNSLESLLFDAKSKLELEEYSSVAAPNESKTIVDKIDEITNWLEEDGWNAEADVLENK 737 (929)
Q Consensus 658 ~~~~~l~~~~~~D~~~~~~~eakN~LEs~iy~~r~~L~~~~~~~~~~~~er~~l~~~l~e~~~WL~~d~~~a~~~~~~~k 737 (929)
++++++++|..+|+.++++.+++|+||+|+|++|+.|+ ++.+++++++|+.|...|+++++||+++ ++++|+++
T Consensus 514 ~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~--~~~~~~~~~~~~~i~~~~~~~~~~l~~~----~~~~~~~~ 587 (605)
T 2kho_A 514 KMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVE--EAGDKLPADDKTAIESALTALETALKGE----DKAAIEAK 587 (605)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHGGGSCHHHHHHHHHHHHHHHHHTTSS----CHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhccCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHH
Confidence 99999999999999999999999999999999999995 3889999999999999999999999843 79999999
Q ss_pred HHHHHhchhhHHHHHHh
Q psy7891 738 LNEINSLVVPIWERHRE 754 (929)
Q Consensus 738 l~eL~~~~~pi~~R~~e 754 (929)
+++|+++++||..|++.
T Consensus 588 ~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 588 MQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHTTCHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998764
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=4.3e-85 Score=776.20 Aligned_cols=543 Identities=30% Similarity=0.462 Sum_probs=480.2
Q ss_pred CeEEEEEcCccceEEEEEECCCceEEeeCCCCCccceEEEEEecCceeecHHHHHhhhhCCCChHhhhHHhcCCCCCCHH
Q psy7891 25 IAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDSPV 104 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~g~~~~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~t~~~~K~llG~~~~d~~ 104 (929)
+.+||||||||||+||++.+| +++++.|+.|+|++||+|+|.+++++||..|..++.++|.++++++|||||+.++|+.
T Consensus 4 ~~~iGIDlGTt~s~va~~~~g-~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 82 (554)
T 1yuw_A 4 GPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAV 82 (554)
T ss_dssp CCCEEEEECSSEEEEEEECSS-SEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSH
T ss_pred CCEEEEEeCcccEEEEEEECC-EEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHH
Confidence 458999999999999999988 8899999999999999999998899999999999999999999999999999999999
Q ss_pred HHhhhhcCCceeeecCCCcceEEEEcCC-ceeeeHHHHHHHHHHHHHHHHHhhcccccceEEEEecCCCCHHHHHHHHHH
Q psy7891 105 VQLFKSRFPYYDIVADEERGTIVFKTND-NELYHVEELVAMLLHKAREYASVSAGQVINEAVIIVPGYFNQIERQSMLKA 183 (929)
Q Consensus 105 v~~~~~~~p~~~~~~~~~~~~v~~~~~~-~~~~~~eel~a~~L~~lk~~a~~~~~~~v~~~VItVPa~f~~~qR~al~~A 183 (929)
++...+++||..+.. ++...+.+...+ ...++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|
T Consensus 83 v~~~~~~~p~~v~~~-~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A 161 (554)
T 1yuw_A 83 VQSDMKHWPFMVVND-AGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDA 161 (554)
T ss_dssp HHHHHTTCSSEEEEE-TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEec-CCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 999999999976533 223333343333 368999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEEEEecC
Q psy7891 184 GELAGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVGYD 263 (929)
Q Consensus 184 a~~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~~d 263 (929)
+++|||+++++++||+|||++|++.+... . +.++||||+||||||++++++. .| .++|+++.++
T Consensus 162 ~~~AGl~~~~li~EP~AAAlay~~~~~~~---~-~~~vlV~D~GgGT~Dvsv~~~~------~g------~~~v~a~~g~ 225 (554)
T 1yuw_A 162 GTIAGLNVLRIINEPTAAAIAYGLDKKVG---A-ERNVLIFDLGGGTFDVSILTIA------AG------IFEVKSTAGD 225 (554)
T ss_dssp HHTTTCEEEEEEEHHHHHHHHTTCSTTCS---S-CEEEEEEEECSSCEEEEEEEEE------TT------EEEEEEEEEE
T ss_pred HHHcCCCeEEEeCcHHHHHHHHHhhccCC---C-CcEEEEEEcCCCeEEEEEEEEc------CC------cEEEEEEeCC
Confidence 99999999999999999999999865421 2 6899999999999999999986 24 7899999999
Q ss_pred CCcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccCCCceeEEEeecccCcceEEEEeHHHHH
Q psy7891 264 RTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSANNEHFAQIEGLIDEIDFKLLVTRAEFE 343 (929)
Q Consensus 264 ~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~v~ie~l~~~~d~~~~itR~efe 343 (929)
..+||.+||..|++||.++|..+ ++.++..+++++.+|+.+||++|+.||.+.++.+.+++++++.++...|+|++|+
T Consensus 226 ~~lGG~d~d~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e 303 (554)
T 1yuw_A 226 THLGGEDFDNRMVNHFIAEFKRK--HKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFE 303 (554)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHHH--TSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH--hCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHH
Confidence 99999999999999999999884 4558888999999999999999999999999899999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhC-CccCCCCCchHHHHhhHHHHHHhhcC-
Q psy7891 344 ALNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVG-VELSKNLNTDEAAALGAVYKAADLST- 421 (929)
Q Consensus 344 ~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~-~~i~~~~n~deaVA~GAa~~aa~~s~- 421 (929)
++|.++++++..+|+++|+.+++...+|+.|+|+||+||+|+|++.|++.|+ .++..+.||++|||+|||++|+.+++
T Consensus 304 ~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~ 383 (554)
T 1yuw_A 304 ELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383 (554)
T ss_dssp HHTHHHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999997 78889999999999999999999987
Q ss_pred -CcccceeEEEEeeecceEEeeeccccCCCcceeEEEEecCCCccCceEEEEEEeccCc---eEEEEEeccCcCcCChhh
Q psy7891 422 -GFKVKKFITKDIVLYPIQVEFERESESGDTKIIKRMLFGPSNTYPQKKILTFNKYVGD---FNFNVSYASEIEHLNPEQ 497 (929)
Q Consensus 422 -~f~~k~~~v~d~~~~~i~i~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~~---~~i~i~~g~~~~~~~~~~ 497 (929)
.++++++.+.|++|++||+++. ++ .+.+||++|+++|.+++.+|++..++ +.|.||+| +..... +
T Consensus 384 ~~~~~~~~~~~dv~p~slgi~~~-----~g---~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~g-e~~~~~--~ 452 (554)
T 1yuw_A 384 KSENVQDLLLLDVTPLSLGIETA-----GG---VMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEG-ERAMTK--D 452 (554)
T ss_dssp CCCCTTSSCCCCBCSSCEEEEET-----TT---EEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEES-SSSBGG--G
T ss_pred ccccccceEEEEeeeeEEEEEec-----Cc---eEEEEEECCCccCceeEEEeeeccCCCceEEEEEEec-Cccccc--c
Confidence 4778999999999999999886 22 37899999999999999999886443 89999999 765332 3
Q ss_pred hccccceeeeeEEecCCcccccCCCccccCCCceEEEEEeCCCccEEEEEeeeEEeccccccCccccccccccccccCCC
Q psy7891 498 IAMLGTKQISKFDVSGVSEAFGKHNEENAESKGIKAHFAMDESGILSLVNIELVVEKQEAAESPLSKLGNTLTSLFSRSK 577 (929)
Q Consensus 498 ~~~~g~~~i~~~~i~gi~~~~~~~~~~~~~~~~i~v~f~ld~~Gil~v~~~e~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 577 (929)
+. .|+++.|.|+++++++. ++|+|+|.+|.||+|+|++.+ ..+.
T Consensus 453 n~-----~lg~~~l~~i~~~~~g~-------~~i~v~f~id~~gil~v~a~~---------~~tg--------------- 496 (554)
T 1yuw_A 453 NN-----LLGKFELTGIPPAPRGV-------PQIEVTFDIDANGILNVSAVD---------KSTG--------------- 496 (554)
T ss_dssp SE-----EEEEEEEECCCCCSTTC-------CCEEEEEEECTTCCEEEEEEE---------TTTC---------------
T ss_pred Cc-----EEEEEEEeCCCCCcccc-------cEEEEEEEEccCceEEEEEEe---------ccCC---------------
Confidence 43 46677899999876554 589999999999999999864 1110
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCchhhhhhhhhhhccCCCCCCCCCCCceeeeeccceeeEeecCCCCCCHHHHH
Q psy7891 578 TDENEKPINEAVDEGNKTAEEPSKNVNSTESQQQSAEESVKNATQTPDADKKPKIVTVKEPISASETRYGVSTLNEKQVE 657 (929)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~v~~~~~~~~~ls~~ei~ 657 (929)
++. .+.++ ....+||+++++
T Consensus 497 -----------------------------------------------------~~~----~~~i~---~~~~~ls~~~i~ 516 (554)
T 1yuw_A 497 -----------------------------------------------------KEN----KITIT---NDKGRLSKEDIE 516 (554)
T ss_dssp -----------------------------------------------------CEE----EEEEC---CCSSCSCHHHHH
T ss_pred -----------------------------------------------------Cce----eEEEe---cCCCCCCHHHHH
Confidence 000 11211 233569999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHhhh
Q psy7891 658 KSLSKLDSLNQIEHAKVRKEKALNSLESLLFDAKSKL 694 (929)
Q Consensus 658 ~~~~~l~~~~~~D~~~~~~~eakN~LEs~iy~~r~~L 694 (929)
++++++++|..+|+.++++.++||+||+|+|++|++|
T Consensus 517 ~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 517 RMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp HHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred HHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999887
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=4.7e-76 Score=693.39 Aligned_cols=500 Identities=28% Similarity=0.432 Sum_probs=435.7
Q ss_pred eEEEEEcCccceEEEEEECCCceEEeeCCCCCccceEEEEEecCceeecHHHHHhhhhCCCChHhhhHHhcCCCCCCHHH
Q psy7891 26 AVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDSPVV 105 (929)
Q Consensus 26 ~vvGID~GTt~s~va~~~~g~~~~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~t~~~~K~llG~~~~d~~v 105 (929)
.+||||||||||+||++.+| .++++.|..|.+++||+|+|.+++++||.+|..+...+| ++++++||+||+++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~g-~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~---- 76 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGG-EVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK---- 76 (509)
T ss_dssp CEEEEEECSSEEEEEEEETT-EEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC----
T ss_pred CEEEEEcCCceEEEEEEECC-EEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE----
Confidence 58999999999999999988 678999999999999999998889999999999999999 999999999998432
Q ss_pred HhhhhcCCceeeecCCCcceEEEEcCCceeeeHHHHHHHHHHHHHHHHHhhcccccceEEEEecCCCCHHHHHHHHHHHH
Q psy7891 106 QLFKSRFPYYDIVADEERGTIVFKTNDNELYHVEELVAMLLHKAREYASVSAGQVINEAVIIVPGYFNQIERQSMLKAGE 185 (929)
Q Consensus 106 ~~~~~~~p~~~~~~~~~~~~v~~~~~~~~~~~~eel~a~~L~~lk~~a~~~~~~~v~~~VItVPa~f~~~qR~al~~Aa~ 185 (929)
+.+++ ..++|+++++++|++|+..++.+++.++.++|||||+||++.||+++++|++
T Consensus 77 ----------------------~~~~g-~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~ 133 (509)
T 2v7y_A 77 ----------------------VEIEG-KQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGR 133 (509)
T ss_dssp ----------------------EEETT-EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred ----------------------EEECC-EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 11223 5789999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEEEEecCCC
Q psy7891 186 LAGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVGYDRT 265 (929)
Q Consensus 186 ~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~~d~~ 265 (929)
.||++++++++||+|||++|++... . +.++||||+||||||++++++. .| .++++++.++..
T Consensus 134 ~AGl~~~~li~Ep~AAAlay~~~~~-----~-~~~vlV~D~GgGT~Dvsv~~~~------~g------~~~v~a~~g~~~ 195 (509)
T 2v7y_A 134 IAGLEVERIINEPTAAALAYGLDKE-----E-DQTILVYDLGGGTFDVSILELG------DG------VFEVKATAGDNH 195 (509)
T ss_dssp HTTCEEEEEEEHHHHHHHHTTGGGS-----C-SEEEEEEEECSSCEEEEEEEEE------TT------EEEEEEEEEETT
T ss_pred HcCCCeEEEecCHHHHHHHHhhccC-----C-CCEEEEEECCCCeEEEEEEEEc------CC------eEEEEEecCCCC
Confidence 9999999999999999999998653 2 7899999999999999999976 24 789999999999
Q ss_pred cchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccCCCceeEEEeecccC----cceEEEEeHHH
Q psy7891 266 LGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSANNEHFAQIEGLIDE----IDFKLLVTRAE 341 (929)
Q Consensus 266 lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~v~ie~l~~~----~d~~~~itR~e 341 (929)
+||.+||..|++||.++|..++ +.++..+++++.+|+.+||++|+.||.+.++.+.++++.++ .++.++|+|++
T Consensus 196 lGG~d~d~~l~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~ 273 (509)
T 2v7y_A 196 LGGDDFDQVIIDYLVNQFKQEH--GIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAK 273 (509)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHH--SCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHh--CCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHH
Confidence 9999999999999999998844 45788889999999999999999999999888999887652 46888999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHHHhhcC
Q psy7891 342 FEALNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYKAADLST 421 (929)
Q Consensus 342 fe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~aa~~s~ 421 (929)
|+++|+++++++..+|+++|+.+++...+|+.|+|+||+||+|+|++.|++.||.++..+.||++|||+|||++|+.+++
T Consensus 274 fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~ 353 (509)
T 2v7y_A 274 FEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAG 353 (509)
T ss_dssp HHHHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcC
Confidence 99999999999999999999999999899999999999999999999999999988889999999999999999999987
Q ss_pred CcccceeEEEEeeecceEEeeeccccCCCcceeEEEEecCCCccCceEEEEEEeccCc---eEEEEEeccCcCcCChhhh
Q psy7891 422 GFKVKKFITKDIVLYPIQVEFERESESGDTKIIKRMLFGPSNTYPQKKILTFNKYVGD---FNFNVSYASEIEHLNPEQI 498 (929)
Q Consensus 422 ~f~~k~~~v~d~~~~~i~i~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~~---~~i~i~~g~~~~~~~~~~~ 498 (929)
. ++++.+.|++|++||+++. ++ .+.+||++|+++|.+++.+|++..++ +.|.||+| +..... ++
T Consensus 354 ~--~~~~~~~dv~p~slgi~~~-----~~---~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~g-e~~~~~--~~ 420 (509)
T 2v7y_A 354 E--VKDVVLLDVTPLSLGIETM-----GG---VFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQG-ERPMAA--DN 420 (509)
T ss_dssp C--CCCCCCCCBCSSEEEEEET-----TT---EEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEE-SSSBGG--GS
T ss_pred C--ccCceEEEeeccccceeec-----CC---ceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEec-Cccccc--cC
Confidence 6 6788999999999999886 22 37899999999999999999876443 89999999 765322 34
Q ss_pred ccccceeeeeEEecCCcccccCCCccccCCCceEEEEEeCCCccEEEEEeeeEEeccccccCccccccccccccccCCCC
Q psy7891 499 AMLGTKQISKFDVSGVSEAFGKHNEENAESKGIKAHFAMDESGILSLVNIELVVEKQEAAESPLSKLGNTLTSLFSRSKT 578 (929)
Q Consensus 499 ~~~g~~~i~~~~i~gi~~~~~~~~~~~~~~~~i~v~f~ld~~Gil~v~~~e~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 578 (929)
..|+++.+.|+++++++. ++|+|+|++|.||+|+|++.+. .+.
T Consensus 421 -----~~lg~~~l~~i~~~~~g~-------~~i~v~f~id~~gil~v~a~~~---------~~g---------------- 463 (509)
T 2v7y_A 421 -----KSLGRFQLTGIPPAPRGV-------PQIEVTFDIDANGIVHVRAKDL---------GTN---------------- 463 (509)
T ss_dssp -----EEEEEEEEECCCCCCTTC-------SCEEEEEEECTTSCEEEEEEET---------TTC----------------
T ss_pred -----cEEEEEEEeCCCCCCCcc-------cEEEEEEEEcCCceEEEEEEEc---------CCC----------------
Confidence 345677889999876554 5899999999999999998641 100
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCchhhhhhhhhhhccCCCCCCCCCCCceeeeeccceeeEeecCCCCCCHHHHHH
Q psy7891 579 DENEKPINEAVDEGNKTAEEPSKNVNSTESQQQSAEESVKNATQTPDADKKPKIVTVKEPISASETRYGVSTLNEKQVEK 658 (929)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~v~~~~~~~~~ls~~ei~~ 658 (929)
++. .+.++ .. .+||++++++
T Consensus 464 ----------------------------------------------------~~~----~~~i~---~~-~~l~~~~i~~ 483 (509)
T 2v7y_A 464 ----------------------------------------------------KEQ----SITIK---SS-SGLSEEEIQR 483 (509)
T ss_dssp ----------------------------------------------------CEE----EEEEC---SS-CSCCSHHHHH
T ss_pred ----------------------------------------------------cEE----EEEEE---ec-CCCCHHHHHH
Confidence 000 11221 12 5699999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHhhHH
Q psy7891 659 SLSKLDSLNQIEHAKVRKEKALNSLE 684 (929)
Q Consensus 659 ~~~~l~~~~~~D~~~~~~~eakN~LE 684 (929)
+++++.+|..+|+.++++.++||+||
T Consensus 484 ~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 484 MIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp HHHHHHHSCGGGGGGGGCCCC-----
T ss_pred HHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 99999999999999999999999997
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=1.4e-61 Score=556.18 Aligned_cols=381 Identities=32% Similarity=0.502 Sum_probs=348.5
Q ss_pred cCCeEEEEEcCccceEEEEEECCCceEEeeCCCCCccceEEEEEecCceeecHHHHHhhhhCCCChHhhhHHhcCCCCCC
Q psy7891 23 YGIAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDS 102 (929)
Q Consensus 23 ~~~~vvGID~GTt~s~va~~~~g~~~~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~t~~~~K~llG~~~~d 102 (929)
..+.+||||||||||+||++.+| .++++.|..|++++||+|+|.+++++||..|..+..++|.++++++|++||+.+++
T Consensus 21 ~~~~viGID~GTt~s~va~~~~g-~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~ 99 (404)
T 3i33_A 21 QSMPAIGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFED 99 (404)
T ss_dssp --CCCEEEEECSSEEEEEEEETT-EEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTS
T ss_pred ccCCEEEEEcCCccEEEEEEECC-eeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCc
Confidence 35789999999999999999988 78999999999999999999988999999999999999999999999999999999
Q ss_pred HHHHhhhhcCCceeeecCCCcceEEEEcCC-ceeeeHHHHHHHHHHHHHHHHHhhcccccceEEEEecCCCCHHHHHHHH
Q psy7891 103 PVVQLFKSRFPYYDIVADEERGTIVFKTND-NELYHVEELVAMLLHKAREYASVSAGQVINEAVIIVPGYFNQIERQSML 181 (929)
Q Consensus 103 ~~v~~~~~~~p~~~~~~~~~~~~v~~~~~~-~~~~~~eel~a~~L~~lk~~a~~~~~~~v~~~VItVPa~f~~~qR~al~ 181 (929)
+.++...+++||..+. .++...+.+...+ ...++|+++++++|+++++.++.+++..+.++|||||++|++.||++++
T Consensus 100 ~~~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~ 178 (404)
T 3i33_A 100 ATVQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATK 178 (404)
T ss_dssp HHHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHH
T ss_pred HHHHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHH
Confidence 9999999999997654 3334445555544 3689999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEEEEe
Q psy7891 182 KAGELAGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVG 261 (929)
Q Consensus 182 ~Aa~~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~ 261 (929)
+|++.|||+++++++||+|||++|+........ . +.++||||+||||||++++++. .+.+++++..
T Consensus 179 ~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~-~-~~~vlV~D~GgGT~dvsv~~~~------------~~~~~v~~~~ 244 (404)
T 3i33_A 179 DAGTITGLNVLRIINEPTAAAIAYGLDKKGCAG-G-EKNVLIFDLGGGTFDVSILTIE------------DGIFEVKSTA 244 (404)
T ss_dssp HHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSS-S-CCEEEEEEECSSCEEEEEEEEE------------TTEEEEEEEE
T ss_pred HHHHHcCCCeEEEeccHHHHHHHHHhhcccccC-C-CceEEEEECCCCcEEEEEEEEe------------CCeEEEEEEe
Confidence 999999999999999999999999987542211 2 7899999999999999999986 2378999999
Q ss_pred cCCCcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccCCCceeEEEeecccCcceEEEEeHHH
Q psy7891 262 YDRTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSANNEHFAQIEGLIDEIDFKLLVTRAE 341 (929)
Q Consensus 262 ~d~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~v~ie~l~~~~d~~~~itR~e 341 (929)
++..+||.+||..|++++.++|..+ .+.++..+++.+.+|+.+||++|+.||.+....+.++.+.++.++.+.|+|++
T Consensus 245 ~~~~lGG~~~d~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~ 322 (404)
T 3i33_A 245 GDTHLGGEDFDNRMVSHLAEEFKRK--HKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRAR 322 (404)
T ss_dssp EETTCSHHHHHHHHHHHHHHHHHHH--HSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH--hCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHH
Confidence 9999999999999999999999884 44578889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHh-CCccCCCCCchHHHHhhHHHHHHhhc
Q psy7891 342 FEALNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVV-GVELSKNLNTDEAAALGAVYKAADLS 420 (929)
Q Consensus 342 fe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f-~~~i~~~~n~deaVA~GAa~~aa~~s 420 (929)
|+++|.++++++..+|.++|+.+++...+|+.|+|+||+||+|+|++.|++.| +.++....||++|||+|||++|++++
T Consensus 323 ~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 402 (404)
T 3i33_A 323 FEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILI 402 (404)
T ss_dssp HHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999 58888999999999999999999987
Q ss_pred C
Q psy7891 421 T 421 (929)
Q Consensus 421 ~ 421 (929)
+
T Consensus 403 ~ 403 (404)
T 3i33_A 403 G 403 (404)
T ss_dssp -
T ss_pred C
Confidence 4
No 7
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=1.2e-60 Score=549.12 Aligned_cols=379 Identities=24% Similarity=0.371 Sum_probs=336.8
Q ss_pred CCeEEEEEcCccceEEEEEECCCceEEeeCCCCCccceEEEEEecCceeecHHHHHhhhhCCCChHhhhHHhcCCCCCCH
Q psy7891 24 GIAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDSP 103 (929)
Q Consensus 24 ~~~vvGID~GTt~s~va~~~~g~~~~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~t~~~~K~llG~~~~d~ 103 (929)
.+.+||||||||||+||++.+| +++++.|..|.+++||+|+|.+++++||..|..+..++|.++++++|++||+.++++
T Consensus 12 ~~~vvGIDlGTt~s~va~~~~g-~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~ 90 (409)
T 4gni_A 12 ERVVIGITFGNSNSSIAHTVDD-KAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSV 90 (409)
T ss_dssp -CCEEEEEECSSEEEEEEEETT-EEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGC
T ss_pred CCcEEEEEcCCCeEEEEEEeCC-ceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccch
Confidence 4679999999999999999766 899999999999999999999999999999999999999999999999999998886
Q ss_pred HHHhhhhcCCceeeecCCCcceEEEEcCC-------ceeeeHHHHHHHHHHHHHHHHHhhcccccceEEEEecCCCCHHH
Q psy7891 104 VVQLFKSRFPYYDIVADEERGTIVFKTND-------NELYHVEELVAMLLHKAREYASVSAGQVINEAVIIVPGYFNQIE 176 (929)
Q Consensus 104 ~v~~~~~~~p~~~~~~~~~~~~v~~~~~~-------~~~~~~eel~a~~L~~lk~~a~~~~~~~v~~~VItVPa~f~~~q 176 (929)
.++.....++. . . .++.+.|.+.. +..++++++++++|++|++.++.+++.++.++|||||++|++.|
T Consensus 91 ~~~~~~~~~~~--~-~--~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~ 165 (409)
T 4gni_A 91 DPTHNHASAHP--Q-E--AGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQ 165 (409)
T ss_dssp CCGGGTTSCCC--E-E--ETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHH
T ss_pred hhhhhccccce--e-c--CCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHH
Confidence 65544333322 1 1 24556666533 36899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEE
Q psy7891 177 RQSMLKAGELAGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVS 256 (929)
Q Consensus 177 R~al~~Aa~~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~ 256 (929)
|++|++||+.|||++++|++||+|||++|+..... ... +.++||||+||||||++++++. .+.++
T Consensus 166 r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~--~~~-~~~vlv~D~GgGT~dvsv~~~~------------~~~~~ 230 (409)
T 4gni_A 166 KAALIAAAAAADLEVLQLISEPAAAVLAYDARPEA--TIS-DKIIVVADLGGSRSDVTVLASR------------SGMYT 230 (409)
T ss_dssp HHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC--------C-CEEEEEEEECSSCEEEEEEEEE------------TTEEE
T ss_pred HHHHHHHHHHcCCCeEEEEcCHHHHHHHHhccccc--CCC-CCEEEEEECCCCceEEEEEEEe------------CCeEE
Confidence 99999999999999999999999999999876421 112 7899999999999999999986 23799
Q ss_pred EEEEecCCCcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccCCCceeEEEeecccCcceEEE
Q psy7891 257 VLGVGYDRTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSANNEHFAQIEGLIDEIDFKLL 336 (929)
Q Consensus 257 v~~~~~d~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~v~ie~l~~~~d~~~~ 336 (929)
++++.++..+||.+||..|+++|..+|..+++...+...+++.+.+|+.+||++|+.||.+..+.+.++++.++.++.+.
T Consensus 231 v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~ 310 (409)
T 4gni_A 231 ILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFAST 310 (409)
T ss_dssp EEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEE
T ss_pred EEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEE
Confidence 99999999999999999999999999998544225788899999999999999999999999999999999999999999
Q ss_pred EeHHHHHHHHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCc--c------CCCCCchHHH
Q psy7891 337 VTRAEFEALNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVE--L------SKNLNTDEAA 408 (929)
Q Consensus 337 itR~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~--i------~~~~n~deaV 408 (929)
|||++|+++|+++++++..+|+++|+.+++...+|+.|+|+||+||+|+|++.|++.||.. + ...+||++||
T Consensus 311 itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~av 390 (409)
T 4gni_A 311 INRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQ 390 (409)
T ss_dssp EEHHHHHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHH
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999953 4 6889999999
Q ss_pred HhhHHHHHHhhcCCc
Q psy7891 409 ALGAVYKAADLSTGF 423 (929)
Q Consensus 409 A~GAa~~aa~~s~~f 423 (929)
|+|||++|+.....+
T Consensus 391 a~GAa~~~~~~~~~~ 405 (409)
T 4gni_A 391 ARGAALQASLIQEHH 405 (409)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHhhhhhhhh
Confidence 999999999887553
No 8
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=4.2e-60 Score=542.07 Aligned_cols=375 Identities=33% Similarity=0.501 Sum_probs=346.6
Q ss_pred CeEEEEEcCccceEEEEEECCCceEEeeCCCCCccceEEEEEecCceeecHHHHHhhhhCCCChHhhhHHhcCCCCCCHH
Q psy7891 25 IAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDSPV 104 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~g~~~~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~t~~~~K~llG~~~~d~~ 104 (929)
..+||||||||||+||++.+| .++++.|..|++++||+|+|.+++++||..|.....++|.++++++|++||+.++++.
T Consensus 18 ~~viGID~GTt~s~va~~~~g-~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 96 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNG-KTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRS 96 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSS-CEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHH
T ss_pred CCEEEEEeCcCcEEEEEEECC-eeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHH
Confidence 458999999999999999988 7889999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcCCceeeecCCCcceEEEEcCC-ceeeeHHHHHHHHHHHHHHHHHhhcccccceEEEEecCCCCHHHHHHHHHH
Q psy7891 105 VQLFKSRFPYYDIVADEERGTIVFKTND-NELYHVEELVAMLLHKAREYASVSAGQVINEAVIIVPGYFNQIERQSMLKA 183 (929)
Q Consensus 105 v~~~~~~~p~~~~~~~~~~~~v~~~~~~-~~~~~~eel~a~~L~~lk~~a~~~~~~~v~~~VItVPa~f~~~qR~al~~A 183 (929)
++...+++||..+ ..+....+.+...+ ...++|+++++++|++|++.++.+++..+.++|||||++|++.||+++++|
T Consensus 97 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a 175 (394)
T 3qfu_A 97 VQKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDA 175 (394)
T ss_dssp HHHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 9999999999765 33334445555544 368999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEEEEecC
Q psy7891 184 GELAGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVGYD 263 (929)
Q Consensus 184 a~~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~~d 263 (929)
++.||++++++++||+|||++|++.... . +.++||||+||||||++++++. .+.+++++..++
T Consensus 176 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~~----~-~~~vlV~D~Gggt~dvsv~~~~------------~~~~~~~~~~~~ 238 (394)
T 3qfu_A 176 GTIAGLNVLRIVNEPTAAAIAYGLDKSD----K-EHQIIVYDLGGGTFDVSLLSIE------------NGVFEVQATSGD 238 (394)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHTTTTSCS----S-CEEEEEEEECSSCEEEEEEEEE------------TTEEEEEEEEEE
T ss_pred HHHcCCceEEEecCHHHHHHHHhhccCC----C-CceEEEEEcCCCceeEEEEEEe------------CCEEEEEEEcCC
Confidence 9999999999999999999999876543 2 7899999999999999999976 237999999999
Q ss_pred CCcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccCCCceeEEEeecccCcceEEEEeHHHHH
Q psy7891 264 RTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSANNEHFAQIEGLIDEIDFKLLVTRAEFE 343 (929)
Q Consensus 264 ~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~v~ie~l~~~~d~~~~itR~efe 343 (929)
..+||.+||..|++|+.++|..++ +.++..+++.+.+|+.+||++|+.||.+..+.+.++.+.++.++.+.|+|++|+
T Consensus 239 ~~lGG~~~d~~l~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~ 316 (394)
T 3qfu_A 239 THLGGEDFDYKIVRQLIKAFKKKH--GIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFE 316 (394)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHHHH--SCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHc--CCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHH
Confidence 999999999999999999998844 457888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHh-CCccCCCCCchHHHHhhHHHHHHhhc
Q psy7891 344 ALNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVV-GVELSKNLNTDEAAALGAVYKAADLS 420 (929)
Q Consensus 344 ~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f-~~~i~~~~n~deaVA~GAa~~aa~~s 420 (929)
++|.++++++..+|.++|+.+++...+|+.|+|+||+||+|+|++.|++.| +.++..+.||++|||+|||++|++++
T Consensus 317 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 317 ELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999899999999999999999999999999 58888999999999999999999875
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=2.2e-58 Score=525.79 Aligned_cols=376 Identities=31% Similarity=0.447 Sum_probs=335.4
Q ss_pred eEEEEEcCccceEEEEEECCCceEEeeCCCCCccceEEEEEe-cCceeecHHHHHhhhhCCCChHhhhHHhcCCCCCCHH
Q psy7891 26 AVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFH-KGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDSPV 104 (929)
Q Consensus 26 ~vvGID~GTt~s~va~~~~g~~~~iv~n~~~~r~~PS~V~~~-~~~~~~G~~A~~~~~~~p~~t~~~~K~llG~~~~d~~ 104 (929)
.+||||||||||+||++.+| .++++.|..|.+++||+|+|. +++++||..|..+..++|.++++++|++||+.++++.
T Consensus 3 ~~vGIDlGTt~s~va~~~~g-~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 81 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGT-TPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (383)
T ss_dssp CCCEEECCSSEEEEEEEETT-EEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHH
T ss_pred cEEEEEcCCCCEEEEEEECC-eeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHH
Confidence 48999999999999999988 778999999999999999995 5789999999999999999999999999999999999
Q ss_pred HHhhhhcCCceeeecCCCcceEEEEcCCceeeeHHHHHHHHHHHHHHHHHhhcccccceEEEEecCCCCHHHHHHHHHHH
Q psy7891 105 VQLFKSRFPYYDIVADEERGTIVFKTNDNELYHVEELVAMLLHKAREYASVSAGQVINEAVIIVPGYFNQIERQSMLKAG 184 (929)
Q Consensus 105 v~~~~~~~p~~~~~~~~~~~~v~~~~~~~~~~~~eel~a~~L~~lk~~a~~~~~~~v~~~VItVPa~f~~~qR~al~~Aa 184 (929)
++...+.+|+..+... .+...+.+++ ..++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 82 ~~~~~~~~p~~~~~~~--~~~~~~~~~g-~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 158 (383)
T 1dkg_D 82 VQRDVSIMPFKIIAAD--NGDAWVEVKG-QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (383)
T ss_dssp HHHHTTTCSSEEEECS--SSBEEEEETT-EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcC--CCcEEEEECC-EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 9888888898654333 3445555544 689999999999999999999999988999999999999999999999999
Q ss_pred HHcCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEEEEecCC
Q psy7891 185 ELAGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVGYDR 264 (929)
Q Consensus 185 ~~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~~d~ 264 (929)
+.||++++.+++||+|||++|+..... . +.++||||+||||||++++++.... . .+.++++++.++.
T Consensus 159 ~~aGl~~~~li~Ep~Aaa~~~~~~~~~----~-~~~~lVvD~Gggttdvsv~~~~~~~--~------~~~~~v~~~~~~~ 225 (383)
T 1dkg_D 159 RIAGLEVKRIINEPTAAALAYGLDKGT----G-NRTIAVYDLGGGTFDISIIEIDEVD--G------EKTFEVLATNGDT 225 (383)
T ss_dssp HHTTCEESCCCBHHHHHHHHHTCCC-C----C-EEEEEEEEECSSCEEEEEEEEEC------------CCCEEEEEEEES
T ss_pred HHcCCceEEEeccHHHHHHHHHhccCC----C-CcEEEEEEcCCCeEEEEEEEEEecC--C------CCeEEEEEEeCCC
Confidence 999999999999999999999876431 2 6899999999999999999975111 0 2368899988888
Q ss_pred CcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccCCCceeEEEeeccc----CcceEEEEeHH
Q psy7891 265 TLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSANNEHFAQIEGLID----EIDFKLLVTRA 340 (929)
Q Consensus 265 ~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~v~ie~l~~----~~d~~~~itR~ 340 (929)
.+||.+||+.|++++.++|..+ ++.++..+++.+.+|+.+||++|+.||...+..+.++.+.+ +.++.+.|+|+
T Consensus 226 ~lGG~~id~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~ 303 (383)
T 1dkg_D 226 HLGGEDFDSRLINYLVEEFKKD--QGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRA 303 (383)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHH--HCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHH--hCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHH
Confidence 9999999999999999999874 34577788999999999999999999999888888887664 25677899999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHHHhhc
Q psy7891 341 EFEALNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYKAADLS 420 (929)
Q Consensus 341 efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~aa~~s 420 (929)
+|+++|+++++++..+|.++|+.+++...+|+.|+|+||+|++|+|++.|++.|+.++..+.||++|||+|||++|++++
T Consensus 304 ~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 304 KLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999888999999999999999999999999998888999999999999999998764
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=6.3e-40 Score=367.90 Aligned_cols=311 Identities=20% Similarity=0.258 Sum_probs=242.3
Q ss_pred CeEEEEEcCccceEEEEEECCCceEEeeCCCCCccceEEEEEecC--c-eeecHHHHHhhhhCCCChHhhhHHhcCCCCC
Q psy7891 25 IAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKG--E-RTFGEDAQIIGTRFPSNSYGYFLDLLGKSID 101 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~g~~~~iv~n~~~~r~~PS~V~~~~~--~-~~~G~~A~~~~~~~p~~t~~~~K~llG~~~~ 101 (929)
+.+|||||||+||+|++..+| ++. .+||+|+|... . .++|++|..+..++|.++...
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~----~~~------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~---------- 62 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG----IVV------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI---------- 62 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE----EEE------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE----------
T ss_pred CceEEEEcCcCcEEEEECCCC----EEE------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE----------
Confidence 358999999999999875433 222 27999999754 3 479999998877777664311
Q ss_pred CHHHHhhhhcCCceeeecCCCcceEEEEcCCceeeeHHHHHHHHHHHHHHHHHhhcccccceEEEEecCCCCHHHHHHHH
Q psy7891 102 SPVVQLFKSRFPYYDIVADEERGTIVFKTNDNELYHVEELVAMLLHKAREYASVSAGQVINEAVIIVPGYFNQIERQSML 181 (929)
Q Consensus 102 d~~v~~~~~~~p~~~~~~~~~~~~v~~~~~~~~~~~~eel~a~~L~~lk~~a~~~~~~~v~~~VItVPa~f~~~qR~al~ 181 (929)
+|+. +|.+ . ....++++++++|++++.. ..++ ...+|||||++|++.||++++
T Consensus 63 ----------~p~~-------~g~i----~--~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~ 115 (344)
T 1jce_A 63 ----------RPMR-------DGVI----A--DYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAIL 115 (344)
T ss_dssp ----------CCEE-------TTEE----S--SHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHH
T ss_pred ----------ecCC-------CCee----C--ChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHH
Confidence 1221 1111 1 1124677777777666542 1233 478999999999999999999
Q ss_pred HHHHHcCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEEEEe
Q psy7891 182 KAGELAGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVG 261 (929)
Q Consensus 182 ~Aa~~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~ 261 (929)
+|++.||++++.+++||+|||++|+.... . +..+||||+||||||++++.. | .+ + ..
T Consensus 116 ~a~~~aG~~~~~li~ep~Aaa~~~~~~~~-----~-~~~~lVvDiGggttdvsv~~~--------~------~~--~-~~ 172 (344)
T 1jce_A 116 DAGLEAGASKVFLIEEPMAAAIGSNLNVE-----E-PSGNMVVDIGGGTTEVAVISL--------G------SI--V-TW 172 (344)
T ss_dssp HHHHHTTCSEEEEEEHHHHHHHHTTCCTT-----S-SSCEEEEEECSSCEEEEEEET--------T------EE--E-EE
T ss_pred HHHHHcCCCeEeccCCHHHHHHhcCCCCC-----C-CceEEEEEeCCCeEEEEEEEc--------C------CE--E-ee
Confidence 99999999999999999999999986542 2 678999999999999999873 2 11 1 23
Q ss_pred cCCCcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccCCCc------eeEEEe--ecccCcce
Q psy7891 262 YDRTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSANNE------HFAQIE--GLIDEIDF 333 (929)
Q Consensus 262 ~d~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~------~~v~ie--~l~~~~d~ 333 (929)
++..+||.+||+.|++++.++|.. ++. ...||++|+.|+.... ..+.++ .+.++.++
T Consensus 173 ~~~~lGG~~id~~l~~~l~~~~~~------~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~ 237 (344)
T 1jce_A 173 ESIRIAGDEMDEAIVQYVRETYRV------AIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPR 237 (344)
T ss_dssp EEESCSHHHHHHHHHHHHHHHHCE------ECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEE
T ss_pred CCCCccChhHHHHHHHHHHHHhCc------ccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCce
Confidence 457899999999999999887643 221 4679999999997643 234443 45577788
Q ss_pred EEEEeHHHHHHHHHHHHhHHHHHHHHHHHHcCCC--CCCc-cEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHh
Q psy7891 334 KLLVTRAEFEALNEDLFDRVGYPVEQALKSSAVP--MDVI-SQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAAL 410 (929)
Q Consensus 334 ~~~itR~efe~l~~~l~~~i~~~i~~~L~~a~~~--~~~I-~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~ 410 (929)
.+.|+|++|+++++++++++.++|.++|+.++.. .+.+ +.|+|+||+|++|.|++.|++.|+.++....||++|||+
T Consensus 238 ~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~ 317 (344)
T 1jce_A 238 KLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAK 317 (344)
T ss_dssp EEEEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHH
T ss_pred eEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHH
Confidence 9999999999999999999999999999987532 2234 689999999999999999999999878888899999999
Q ss_pred hHHHHHHhhc
Q psy7891 411 GAVYKAADLS 420 (929)
Q Consensus 411 GAa~~aa~~s 420 (929)
||+++|+.++
T Consensus 318 Gaa~~a~~~~ 327 (344)
T 1jce_A 318 GAGMVLDKVN 327 (344)
T ss_dssp HHHHGGGCHH
T ss_pred HHHHHHhChH
Confidence 9999998665
No 11
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.96 E-value=3.9e-28 Score=250.74 Aligned_cols=212 Identities=17% Similarity=0.280 Sum_probs=177.2
Q ss_pred EEEEeeecceEEeeeccccCCCcceeEEEEecCCCccCceEEEEEEeccCc---eEEEEEeccCcCcCChhhhcccccee
Q psy7891 429 ITKDIVLYPIQVEFERESESGDTKIIKRMLFGPSNTYPQKKILTFNKYVGD---FNFNVSYASEIEHLNPEQIAMLGTKQ 505 (929)
Q Consensus 429 ~v~d~~~~~i~i~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~~---~~i~i~~g~~~~~~~~~~~~~~g~~~ 505 (929)
.+.|++||++||++. |+ .+.+||++|++||++++.+|++..++ +.|.||+| ++... .+|..
T Consensus 2 ~l~DV~p~slGie~~-----gg---~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqG-e~~~~--~dn~~----- 65 (219)
T 4e81_A 2 LLLDVTPLSLGIETM-----GG---VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQG-ERKRA--ADNKS----- 65 (219)
T ss_dssp CCCCBCSSCEEEEET-----TT---EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEES-SCSBG--GGSEE-----
T ss_pred eEEEecCcEEEEEEe-----CC---EEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEc-CCccc--ccCCE-----
Confidence 468999999999997 33 38899999999999999999987553 99999999 87642 24444
Q ss_pred eeeEEecCCcccccCCCccccCCCceEEEEEeCCCccEEEEEeeeEEeccccccCccccccccccccccCCCCCCCCCCc
Q psy7891 506 ISKFDVSGVSEAFGKHNEENAESKGIKAHFAMDESGILSLVNIELVVEKQEAAESPLSKLGNTLTSLFSRSKTDENEKPI 585 (929)
Q Consensus 506 i~~~~i~gi~~~~~~~~~~~~~~~~i~v~f~ld~~Gil~v~~~e~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 585 (929)
|++|.|.||++++++. ++|+|+|.+|.||+|+|++.+ .+++
T Consensus 66 Lg~f~l~gipp~p~G~-------~~IeVtf~iD~nGiL~V~a~d---------~~tg----------------------- 106 (219)
T 4e81_A 66 LGQFNLDGINPAPRGM-------PQIEVTFDIDADGILHVSAKD---------KNSG----------------------- 106 (219)
T ss_dssp EEEEEEECCCCCSTTC-------SCEEEEEEECTTCCEEEEEEE---------TTTC-----------------------
T ss_pred EEEEEEeCCCCCCCCC-------ceEEEEEEeCCCCCEeeeeec---------cccC-----------------------
Confidence 5667899999887665 689999999999999999874 1110
Q ss_pred ccccccCCCCCCCCCCCCCCchhhhhhhhhhhccCCCCCCCCCCCceeeeeccceeeEeecCCCCCCHHHHHHHHHHHHh
Q psy7891 586 NEAVDEGNKTAEEPSKNVNSTESQQQSAEESVKNATQTPDADKKPKIVTVKEPISASETRYGVSTLNEKQVEKSLSKLDS 665 (929)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~v~~~~~~~~~ls~~ei~~~~~~l~~ 665 (929)
++. .+.|+ .-.+||++++++|++.+++
T Consensus 107 ---------------------------------------------~~~----~i~I~----~~~~Ls~eeI~~m~~~a~~ 133 (219)
T 4e81_A 107 ---------------------------------------------KEQ----KITIK----ASSGLNEDEIQKMVRDAEA 133 (219)
T ss_dssp ---------------------------------------------CEE----EEEEC----TTCSCCHHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccc----eEeee----ccccccHHHHHHHHHHHHH
Confidence 000 12221 1246999999999999999
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHhhhchhhhccCCChhHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHhch
Q psy7891 666 LNQIEHAKVRKEKALNSLESLLFDAKSKLELEEYSSVAAPNESKTIVDKIDEITNWLEEDGWNAEADVLENKLNEINSLV 745 (929)
Q Consensus 666 ~~~~D~~~~~~~eakN~LEs~iy~~r~~L~~~~~~~~~~~~er~~l~~~l~e~~~WL~~d~~~a~~~~~~~kl~eL~~~~ 745 (929)
|..+|+.++++.+++|.||+|+|++|..|+ ++.+++++++|+.|...|.++++||+++ ++++|++++++|+.++
T Consensus 134 ~~~eD~~~r~~~e~kn~le~~i~~~~~~l~--~~~~~l~~~~k~~i~~~l~~~~~~L~~~----~~~~i~~~~~~L~~~~ 207 (219)
T 4e81_A 134 NAEADRKFEELVQTRNQGDHLLHSTRKQVE--EAGDKLPADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVS 207 (219)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHGGGSCHHHHHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHT
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHHHHHHH--HhhhhCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999995 3888999999999999999999999964 6999999999999999
Q ss_pred hhHHHHHHh
Q psy7891 746 VPIWERHRE 754 (929)
Q Consensus 746 ~pi~~R~~e 754 (929)
.||..|+++
T Consensus 208 ~~i~~~~~~ 216 (219)
T 4e81_A 208 QKLMEIAQQ 216 (219)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHhc
Confidence 999999876
No 12
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.95 E-value=5.2e-27 Score=244.90 Aligned_cols=211 Identities=15% Similarity=0.247 Sum_probs=174.3
Q ss_pred EEeeecceEEeeeccccCCCcceeEEEEecCCCccCceEEEEEEeccCc---eEEEEEeccCcCcCChhhhccccceeee
Q psy7891 431 KDIVLYPIQVEFERESESGDTKIIKRMLFGPSNTYPQKKILTFNKYVGD---FNFNVSYASEIEHLNPEQIAMLGTKQIS 507 (929)
Q Consensus 431 ~d~~~~~i~i~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~~---~~i~i~~g~~~~~~~~~~~~~~g~~~i~ 507 (929)
.|++||+|||++. |+ .+.+||++|++||++++.+|++..++ |.|.|||| ++... .+| ..|+
T Consensus 1 ~Dv~p~slGie~~-----~g---~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qG-e~~~~--~~n-----~~Lg 64 (227)
T 1u00_A 1 MDVIPLSLGLETM-----GG---LVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQG-ERELV--QDC-----RSLA 64 (227)
T ss_dssp CCBCSSCEEEEET-----TT---EEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEEC-SSSBG--GGS-----EEEE
T ss_pred CCcccceEEEEEe-----CC---EEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEec-CCccC--CCC-----CEEE
Confidence 3789999999987 22 37899999999999999999987553 99999999 76532 233 4566
Q ss_pred eEEecCCcccccCCCccccCCCceEEEEEeCCCccEEEEEeeeEEeccccccCccccccccccccccCCCCCCCCCCccc
Q psy7891 508 KFDVSGVSEAFGKHNEENAESKGIKAHFAMDESGILSLVNIELVVEKQEAAESPLSKLGNTLTSLFSRSKTDENEKPINE 587 (929)
Q Consensus 508 ~~~i~gi~~~~~~~~~~~~~~~~i~v~f~ld~~Gil~v~~~e~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 587 (929)
+|.|.||++++++. ++|+|+|.+|.||+|+|++.+ ..++
T Consensus 65 ~f~l~gi~~~p~G~-------~~I~Vtf~iD~nGiL~V~a~d---------~~tg------------------------- 103 (227)
T 1u00_A 65 RFALRGIPALPAGG-------AHIRVTFQVDADGLLSVTAME---------KSTG------------------------- 103 (227)
T ss_dssp EEEECCCCCCSTTC-------SCEEEEEEECTTCCEEEEEEE---------TTTC-------------------------
T ss_pred EEEEeCCCCCCCCc-------eEEEEEEEECCCCcEEEEeec---------cccc-------------------------
Confidence 77999999876554 589999999999999998863 1100
Q ss_pred ccccCCCCCCCCCCCCCCchhhhhhhhhhhccCCCCCCCCCCCceeeeeccceeeEeecCCCCCCHHHHHHHHHHHHhhh
Q psy7891 588 AVDEGNKTAEEPSKNVNSTESQQQSAEESVKNATQTPDADKKPKIVTVKEPISASETRYGVSTLNEKQVEKSLSKLDSLN 667 (929)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~v~~~~~~~~~ls~~ei~~~~~~l~~~~ 667 (929)
++. .+.++ .. .+||.++++++++++..|.
T Consensus 104 -------------------------------------------~~~----~i~i~---~~-~~Ls~eei~~~~~~~~~~~ 132 (227)
T 1u00_A 104 -------------------------------------------VEA----SIQVK---PS-YGLTDSEIASMIKDSMSYA 132 (227)
T ss_dssp -------------------------------------------CEE----EEEEC---CC-SCCCHHHHHHHHHHHHHTH
T ss_pred -------------------------------------------ccc----eEEEE---ec-cCCCHHHHHHHHHHHHhhh
Confidence 001 12222 11 4599999999999999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHhhhchhhhccCCChhHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHhchhh
Q psy7891 668 QIEHAKVRKEKALNSLESLLFDAKSKLELEEYSSVAAPNESKTIVDKIDEITNWLEEDGWNAEADVLENKLNEINSLVVP 747 (929)
Q Consensus 668 ~~D~~~~~~~eakN~LEs~iy~~r~~L~~~~~~~~~~~~er~~l~~~l~e~~~WL~~d~~~a~~~~~~~kl~eL~~~~~p 747 (929)
.+|+.++++.+++|+||+|||++|+.|+ ++.+++++++|+.|...|+++++|||++ ++++|++++++|++++.|
T Consensus 133 ~~D~~~~e~~e~kn~le~~i~~~~~~l~--~~~~~~~~~~k~~i~~~l~~~~~wl~~~----d~~~~~~~~~~L~~~~~~ 206 (227)
T 1u00_A 133 EQDVKARMLAEQKVEAARVLESLHGALA--ADAALLSAAERQVIDDAAAHLSEVAQGD----DVDAIEQAIKNVDKQTQD 206 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHGGGSCHHHHHHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHH--hhhccCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999995 3778999999999999999999999943 489999999999999999
Q ss_pred HHHHHHhh
Q psy7891 748 IWERHREH 755 (929)
Q Consensus 748 i~~R~~e~ 755 (929)
|..|++..
T Consensus 207 i~~r~~~~ 214 (227)
T 1u00_A 207 FAARRMDQ 214 (227)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987643
No 13
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.93 E-value=1.4e-26 Score=258.71 Aligned_cols=231 Identities=17% Similarity=0.166 Sum_probs=167.8
Q ss_pred eeeHHHHHHHHHHHHHHHHHhhcccccceEE--EEecCCCCHHHHHHHHHHHHHc--------C------CcEEEEechh
Q psy7891 135 LYHVEELVAMLLHKAREYASVSAGQVINEAV--IIVPGYFNQIERQSMLKAGELA--------G------LKVLQLMNDY 198 (929)
Q Consensus 135 ~~~~eel~a~~L~~lk~~a~~~~~~~v~~~V--ItVPa~f~~~qR~al~~Aa~~A--------G------l~~~~li~Ep 198 (929)
.+..+...++++..|+..++...+.. .++| |+||++|+..||+++++|+..+ | +..+++++||
T Consensus 94 ~~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep 172 (346)
T 2fsj_A 94 RLASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQG 172 (346)
T ss_dssp CTTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETT
T ss_pred cccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccH
Confidence 34456777888888877653333333 5699 9999999999999999997765 4 3558899999
Q ss_pred HHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEEEEecCCCcchHHHHHHHHHH
Q psy7891 199 TAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVGYDRTLGGLEMQIRLRDF 278 (929)
Q Consensus 199 tAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~~d~~lGG~~~D~~l~~~ 278 (929)
+|||++| +... .+.+. ..+++|||+||||||++++++. .| . .+.+..++..+||.+|++.|+++
T Consensus 173 ~AAa~~~-l~~~-~~~~~-~~~vlVvDIGgGTtDv~vi~~~------~g------~-~v~~~s~~~~lGg~~i~~~I~~~ 236 (346)
T 2fsj_A 173 VGAALYL-LNQG-IIEQQ-PGYGVVIDVGSRTTDVLTINLM------DM------E-PVVELSFSLQIGVGDAISALSRK 236 (346)
T ss_dssp HHHHHHH-HHHT-SSCCC-SSEEEEEEECSSCEEEEEEETT------TT------E-ECGGGCEEESCCHHHHHHHHHHH
T ss_pred HHHHHHh-hccc-ccccc-CCcEEEEECCCCcEEEEEEEec------CC------E-EEeecCCCcchhHHHHHHHHHHH
Confidence 9999998 3221 12112 4789999999999999999853 12 2 44444466789999999999998
Q ss_pred HHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccCCCceeEEEeecccCcceEEEEeHHHH-HHHHHHHHhHHHHHH
Q psy7891 279 LGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSANNEHFAQIEGLIDEIDFKLLVTRAEF-EALNEDLFDRVGYPV 357 (929)
Q Consensus 279 l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~v~ie~l~~~~d~~~~itR~ef-e~l~~~l~~~i~~~i 357 (929)
+.+++... .++. ...++ .. ..+.+ .+. .++++++ +++++++++++.+.|
T Consensus 237 i~~~~g~~----~~i~---------~~~~e-------~~--~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i 286 (346)
T 2fsj_A 237 IAKETGFV----VPFD---------LAQEA-------LS--HPVMF----RQK----QVGGPEVSGPILEDLANRIIENI 286 (346)
T ss_dssp HHHHHCCC----CCHH---------HHHHH-------TT--SCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC----cCCC---------HHHHh-------cC--CeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHH
Confidence 87766430 0111 11122 11 12222 222 3569999 999999999999999
Q ss_pred HHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCc-c-CCCCCchHHHHhhHHHHHH
Q psy7891 358 EQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVE-L-SKNLNTDEAAALGAVYKAA 417 (929)
Q Consensus 358 ~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~-i-~~~~n~deaVA~GAa~~aa 417 (929)
+++|+.+ .++++.|+|+||++++ +++.|++.|+.. + ....||++|+|+|+..++.
T Consensus 287 ~~~l~~~---~~~i~~IvL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 287 RLNLRGE---VDRVTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp HHHHGGG---GGGEEEEEEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred HHHHHhh---hhcccEEEEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 9999876 5678999999999999 999999999832 1 2267999999999997764
No 14
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.93 E-value=9.8e-25 Score=236.03 Aligned_cols=203 Identities=17% Similarity=0.251 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHHHHHHhhcccccceEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEechhHHHHHHhcccccccCCCCCC
Q psy7891 139 EELVAMLLHKAREYASVSAGQVINEAVIIVPGYFNQIERQSMLKAGELAGLKVLQLMNDYTAVALNYGIFKRKDFNETNP 218 (929)
Q Consensus 139 eel~a~~L~~lk~~a~~~~~~~v~~~VItVPa~f~~~qR~al~~Aa~~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~ 218 (929)
.+.+..+|+++++.++...+..+..+|+++|++|+..+|+++.++++.+|+++..++.||+|+|++|+..
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~---------- 139 (272)
T 3h1q_A 70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN---------- 139 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS----------
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC----------
Confidence 3556788999999998888888899999999999999999999999999999999999999999988742
Q ss_pred cEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEEEEecCCCcchHHHHHHHHHHHHHHhhhhcccCCCccCCHH
Q psy7891 219 VHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVGYDRTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPR 298 (929)
Q Consensus 219 ~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~~d~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~ 298 (929)
..+|+|+|||||+++++. .| .+ + ......+||.+||..|++++.- +
T Consensus 140 -~~~viDiGggst~~~~~~--------~g------~~--~-~~~~~~~Gg~~~~~~l~~~l~~----------~------ 185 (272)
T 3h1q_A 140 -DGIVVDIGGGTTGIAVIE--------KG------KI--T-ATFDEPTGGTHLSLVLAGSYKI----------P------ 185 (272)
T ss_dssp -SEEEEEECSSCEEEEEEE--------TT------EE--E-EECCBSCCHHHHHHHHHHHHTC----------C------
T ss_pred -CEEEEEECCCcEEEEEEE--------CC------EE--E-EEecCCCcHHHHHHHHHHHhCC----------C------
Confidence 259999999999999986 13 22 2 3466789999999999988731 1
Q ss_pred HHHHHHHHHHHhhhhccCCCceeEEEeecccCcceEEEEeHHHHHHHHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEc
Q psy7891 299 AVAKLFKEAGRLKNVLSANNEHFAQIEGLIDEIDFKLLVTRAEFEALNEDLFDRVGYPVEQALKSSAVPMDVISQVILVG 378 (929)
Q Consensus 299 ~~~kL~~~aek~K~~LS~~~~~~v~ie~l~~~~d~~~~itR~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvG 378 (929)
...|+++|+.++ ++++|++++.++++++...+.+.|+..+ +++.|+|+|
T Consensus 186 -----~~~ae~~k~~~~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~G 234 (272)
T 3h1q_A 186 -----FEEAETIKKDFS----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVG 234 (272)
T ss_dssp -----HHHHHHHHHSST----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEES
T ss_pred -----HHHHHHHHHhcC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEEC
Confidence 346888888876 5899999999999999999999998664 477999999
Q ss_pred CCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHH
Q psy7891 379 AGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYKA 416 (929)
Q Consensus 379 G~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~a 416 (929)
|++++|.+++.|++.|+.++..+.||++++|+|||++|
T Consensus 235 G~a~~~~l~~~l~~~l~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 235 GTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp GGGGSTTHHHHHHHHHSSCCBCCSSGGGHHHHHHHTTC
T ss_pred CccchhhHHHHHHHHhCCCccccCChHHHHHHHHHhcC
Confidence 99999999999999999888889999999999999864
No 15
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.93 E-value=7.9e-26 Score=256.52 Aligned_cols=319 Identities=18% Similarity=0.135 Sum_probs=204.0
Q ss_pred CeEEEEEcCccceEEEEEECCCceEEeeCCCCCccceEEEEEecCceeecHHHHHhhhhCCCChHhhhHHhcCCCCCCHH
Q psy7891 25 IAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDSPV 104 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~g~~~~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~t~~~~K~llG~~~~d~~ 104 (929)
..++|||+||++++++++..| .+.+ +..|.+.+|+.+ +.++ ...++..+...+|+++++.
T Consensus 13 ~~~vgiDiGt~~i~~~~~~~~-~~~i--~~~g~~~~ps~~-~~~g-----------~i~d~~~~~~~ik~~~~~~----- 72 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVSGN-PPAL--KALASRPTPPGL-LMEG-----------MVAEPAALAQEIKELLLEA----- 72 (377)
T ss_dssp CCCEEEEECSSEEEEEEEETT-TTEE--EEEEEEECCTTS-EETT-----------EESCHHHHHHHHHHHHHHH-----
T ss_pred CceEEEEeCCCeEEEEEEeCC-ceEE--EEEEeEECCCCc-ccCC-----------CcCCHHHHHHHHHHHHHHc-----
Confidence 468999999999999999865 4433 334455555532 1222 3355667778888888651
Q ss_pred HHhhhhcCCceeeecCCCcceEEEEcCCceeeeHHHHHHHHHHHHHHHHHhhcccccceEEEEecCCCCHHH--------
Q psy7891 105 VQLFKSRFPYYDIVADEERGTIVFKTNDNELYHVEELVAMLLHKAREYASVSAGQVINEAVIIVPGYFNQIE-------- 176 (929)
Q Consensus 105 v~~~~~~~p~~~~~~~~~~~~v~~~~~~~~~~~~eel~a~~L~~lk~~a~~~~~~~v~~~VItVPa~f~~~q-------- 176 (929)
.. .... ....-+........+.- ..++.+++-..+ +..++.+++.++.++||.+|. .+.+
T Consensus 73 -~~---~~~~-v~~~i~~~~~~~~~~~~-~~v~~~el~~~i----~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~ 140 (377)
T 2ych_A 73 -RT---RKRY-VVTALSNLAVILRPIQV-PKMPLKEMEEAV----RWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQ 140 (377)
T ss_dssp -TC---CCCE-EEEEECGGGCEEEEEEE-ECCCHHHHHHHH----HHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSE
T ss_pred -CC---Ccce-EEEEecCCcEEEEEEEC-CCCCHHHHHHHH----HHHHhhcCCCChhHceEEEEE--eCCCCCCCCcce
Confidence 00 0000 01111111111111111 357888876543 446777888899999999983 3322
Q ss_pred ------------HHHHHHHHHHcCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccc
Q psy7891 177 ------------RQSMLKAGELAGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTK 244 (929)
Q Consensus 177 ------------R~al~~Aa~~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~ 244 (929)
.+++++|++.|||++..++.||+|||++|+..... .. +..++|||+||||||++++.
T Consensus 141 ~~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~---~~-~~~~~vvDiGggttdi~i~~------- 209 (377)
T 2ych_A 141 VQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAE---EP-DRVFLVLDIGAESTSLVLLR------- 209 (377)
T ss_dssp EEEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHT---ST-TCEEEEEEECSSCEEEEEEE-------
T ss_pred eEEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhccc---cc-CCeEEEEEECCCcEEEEEEE-------
Confidence 38999999999999999999999999998754321 12 57899999999999999987
Q ss_pred cCCcccCCCcEEEEEEecCCCcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccCCCceeEEE
Q psy7891 245 ERGFVETHPQVSVLGVGYDRTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSANNEHFAQI 324 (929)
Q Consensus 245 ~~G~~~~~~~~~v~~~~~d~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~v~i 324 (929)
.| .+. ..++..+||.+||..|++.+ .. + +.+||++|+.++.........
T Consensus 210 -~g------~~~---~~~~~~~GG~~i~~~i~~~~--------~~--~-----------~~~aE~~K~~~~~~~~~~~~~ 258 (377)
T 2ych_A 210 -GD------KPL---AVRVLTLSGKDFTEAIARSF--------NL--D-----------LLAAEEVKRTYGMATLPTEDE 258 (377)
T ss_dssp -TT------EEE---EEEEESCSHHHHHHHHHHHT--------TC--C-----------HHHHHHHHHHTC---------
T ss_pred -CC------EEE---EEEeeechHHHHHHHHHHHh--------CC--C-----------HHHHHHHHhhccccccccccc
Confidence 13 221 23456899999999998732 11 1 457999999887543211111
Q ss_pred eecccCcceEEEEeHHHHHHHHHHHHhHHHHHHHHHHHHc--CCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCC-
Q psy7891 325 EGLIDEIDFKLLVTRAEFEALNEDLFDRVGYPVEQALKSS--AVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKN- 401 (929)
Q Consensus 325 e~l~~~~d~~~~itR~efe~l~~~l~~~i~~~i~~~L~~a--~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~- 401 (929)
+..++-.+....++|++|+++++++++++...|+++|+.. +.....++.|+|+||++++|.|++.|++.|+.++...
T Consensus 259 ~~~i~~~~~~~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~ 338 (377)
T 2ych_A 259 ELLLDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVN 338 (377)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECC
T ss_pred ccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecC
Confidence 1111111245689999999999999999999999999853 5666689999999999999999999999998533221
Q ss_pred -------------------CCchHHHHhhHHHHHH
Q psy7891 402 -------------------LNTDEAAALGAVYKAA 417 (929)
Q Consensus 402 -------------------~n~deaVA~GAa~~aa 417 (929)
.+|..++|.|+|+++.
T Consensus 339 P~~~v~~~~~~~~~~~l~~~~p~~a~a~Glal~~~ 373 (377)
T 2ych_A 339 PWEAVAVDPKRFESEQLQEIGPEFAVALGLALRGV 373 (377)
T ss_dssp GGGGSBCCTTTSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhcccCcccCCHHHHHhhhHHHHHHHHHHHcCC
Confidence 1344567888888764
No 16
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.91 E-value=4.6e-24 Score=245.26 Aligned_cols=242 Identities=12% Similarity=0.054 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHHHhhccc--ccceEEEEecCCCCHHHHHHHHHHH-HHcCCcEEEEechhHHHHHH-hcccccccCCCCC
Q psy7891 142 VAMLLHKAREYASVSAGQ--VINEAVIIVPGYFNQIERQSMLKAG-ELAGLKVLQLMNDYTAVALN-YGIFKRKDFNETN 217 (929)
Q Consensus 142 ~a~~L~~lk~~a~~~~~~--~v~~~VItVPa~f~~~qR~al~~Aa-~~AGl~~~~li~EptAAAl~-y~~~~~~~~~~~~ 217 (929)
+..+++|+.. ..++. ....+|||+|++|+..+|+++.+++ +.+|++.+.+++||+|||++ |... .+...
T Consensus 89 ~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~---~~~~~- 161 (418)
T 1k8k_A 89 MERFMEQVIF---KYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSR---QVGER- 161 (418)
T ss_dssp HHHHHHHHHH---TTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGST---TCCSC-
T ss_pred HHHHHHHHHH---hccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhccc---ccCCC-
Confidence 3445555542 22332 2457999999999999999999999 99999999999999999987 5311 11112
Q ss_pred CcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEEEEecCCCcchHHHHHHHHHHHHHHhhhhcccCCCccCCH
Q psy7891 218 PVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVGYDRTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENP 297 (929)
Q Consensus 218 ~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~~d~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~ 297 (929)
..+.||||+|+||||++++. .| ..+.....+..+||++||..|+++|..++.. .....
T Consensus 162 ~~~glVvDiG~gtt~v~~v~--------~G-------~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~-----~~~~~-- 219 (418)
T 1k8k_A 162 TLTGTVIDSGDGVTHVIPVA--------EG-------YVIGSCIKHIPIAGRDITYFIQQLLRDREVG-----IPPEQ-- 219 (418)
T ss_dssp CCCEEEEEESSSCEEEEEEE--------TT-------EECGGGCEEESCSHHHHHHHHHHHHHTTCCC-----CCGGG--
T ss_pred CCeEEEEEcCCCceEEEEeE--------CC-------EEcccceEEEeCcHHHHHHHHHHHHHhcCCC-----CCCHH--
Confidence 23779999999999999985 24 1122222446899999999999999865431 11111
Q ss_pred HHHHHHHHHHHHhhhhccCCC-----------------ceeEEEeecccCcceEEEEeHHHH---HHHHHHH------Hh
Q psy7891 298 RAVAKLFKEAGRLKNVLSANN-----------------EHFAQIEGLIDEIDFKLLVTRAEF---EALNEDL------FD 351 (929)
Q Consensus 298 ~~~~kL~~~aek~K~~LS~~~-----------------~~~v~ie~l~~~~d~~~~itR~ef---e~l~~~l------~~ 351 (929)
-...++++|+.++... ...+.++....+....+.|+++.| |.++.|. +.
T Consensus 220 -----~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~ 294 (418)
T 1k8k_A 220 -----SLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQ 294 (418)
T ss_dssp -----HHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCC
T ss_pred -----HHHHHHHHHHhhchhcccHHHHHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCC
Confidence 1245677777665321 124566665556667899999999 5555543 25
Q ss_pred HHHHHHHHHHHHcC--CCCCCccEEEEEcCCcCCHHHHHHHHHHhCCc------------------------cCCCCCch
Q psy7891 352 RVGYPVEQALKSSA--VPMDVISQVILVGAGTRVPKVQEKITKVVGVE------------------------LSKNLNTD 405 (929)
Q Consensus 352 ~i~~~i~~~L~~a~--~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~------------------------i~~~~n~d 405 (929)
.+.++|.++|..+. +..+.++.|+|+||+|++|.++++|.+.|+.. +..+.++.
T Consensus 295 ~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~ 374 (418)
T 1k8k_A 295 PISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQR 374 (418)
T ss_dssp CHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCT
T ss_pred CHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccc
Confidence 68899999999875 44556789999999999999999998876521 12234677
Q ss_pred HHHHhhHHHHHH
Q psy7891 406 EAAALGAVYKAA 417 (929)
Q Consensus 406 eaVA~GAa~~aa 417 (929)
.++.+||+++|.
T Consensus 375 ~~~w~Ggsilas 386 (418)
T 1k8k_A 375 YAVWFGGSMLAS 386 (418)
T ss_dssp THHHHHHHHHTT
T ss_pred cceeHhHHHHHc
Confidence 999999999986
No 17
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.91 E-value=6.3e-24 Score=240.39 Aligned_cols=306 Identities=12% Similarity=0.131 Sum_probs=194.4
Q ss_pred CeEEEEEcCccceEEEEEECCCceEEeeCCCCCccceE-EEEEecCceeecHHHHHhhhhCCCChHhhhHHhcCCCCCCH
Q psy7891 25 IAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPT-LVAFHKGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDSP 103 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~g~~~~iv~n~~~~r~~PS-~V~~~~~~~~~G~~A~~~~~~~p~~t~~~~K~llG~~~~d~ 103 (929)
...|+||+||.++++++...+.|.-++.+-.|....++ .+.+..+..++|++|.... . ...+
T Consensus 5 ~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~--~~~~----------- 67 (375)
T 2fxu_A 5 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----G--ILTL----------- 67 (375)
T ss_dssp CCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHT----T--SEEE-----------
T ss_pred CceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcC----c--ccce-----------
Confidence 45789999999999999876655444433333222221 1222234567888886531 0 0001
Q ss_pred HHHhhhhcCCceeeecCCCcceEEEEcCCceeeeHHHHHHHHHHHHHHHHHhhcccc--cceEEEEecCCCCHHHHHHHH
Q psy7891 104 VVQLFKSRFPYYDIVADEERGTIVFKTNDNELYHVEELVAMLLHKAREYASVSAGQV--INEAVIIVPGYFNQIERQSML 181 (929)
Q Consensus 104 ~v~~~~~~~p~~~~~~~~~~~~v~~~~~~~~~~~~eel~a~~L~~lk~~a~~~~~~~--v~~~VItVPa~f~~~qR~al~ 181 (929)
.+|. ..+..... +.+..+++|+.. ..++.. -..+|||+|++++..+|+++.
T Consensus 68 -------~~Pi----------------~~G~i~d~-d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~~ 120 (375)
T 2fxu_A 68 -------KYPI----------------EHGIITNW-DDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKMT 120 (375)
T ss_dssp -------ECSE----------------ETTEECCH-HHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHHH
T ss_pred -------eccc----------------cCCcccCH-HHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHHH
Confidence 1111 11211222 234455555542 223322 346999999999999999888
Q ss_pred HHH-HHcCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEEEE
Q psy7891 182 KAG-ELAGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGV 260 (929)
Q Consensus 182 ~Aa-~~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~ 260 (929)
+++ +.+|++.+.+++||+|||++|+. ...||||+|+|||+++.+. .| +.+...
T Consensus 121 e~~fe~~g~~~~~~~~e~~aaa~a~g~-----------~~~lVvDiG~gtt~v~~v~--------~G-------~~~~~~ 174 (375)
T 2fxu_A 121 QIMFETFNVPAMYVAIQAVLSLYASGR-----------TTGIVLDSGDGVTHNVPIY--------EG-------YALPHA 174 (375)
T ss_dssp HHHHHTTCCSEEEEEEHHHHHHHHTTC-----------SSEEEEEECSSCEEEEEEE--------TT-------EECGGG
T ss_pred HHHHHhcCcceEEEccchheeeeecCC-----------CeEEEEEcCCCceEEeEeE--------CC-------EEeccc
Confidence 775 88899999999999999999873 3579999999999998765 24 222222
Q ss_pred ecCCCcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhc----------------cCCCceeEEE
Q psy7891 261 GYDRTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVL----------------SANNEHFAQI 324 (929)
Q Consensus 261 ~~d~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~L----------------S~~~~~~v~i 324 (929)
.....+||++||..|+++|..+.. .+.. . .-...++++|+.+ +......+.+
T Consensus 175 ~~~~~~GG~~lt~~l~~~l~~~~~-------~~~~-~----~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~l 242 (375)
T 2fxu_A 175 IMRLDLAGRDLTDYLMKILTERGY-------SFVT-T----AEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYEL 242 (375)
T ss_dssp CEEESCCHHHHHHHHHHHHHHHTC-------CCCS-H----HHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEEC
T ss_pred eEEeccCHHHHHHHHHHHHHhcCC-------CCCc-H----HHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEEC
Confidence 334689999999999999987521 1110 0 0012334444433 2222222333
Q ss_pred eecccCcceEEEEeHHHHH---HHHHHH-----HhHHHHHHHHHHHHcC--CCCCCccEEEEEcCCcCCHHHHHHHHHHh
Q psy7891 325 EGLIDEIDFKLLVTRAEFE---ALNEDL-----FDRVGYPVEQALKSSA--VPMDVISQVILVGAGTRVPKVQEKITKVV 394 (929)
Q Consensus 325 e~l~~~~d~~~~itR~efe---~l~~~l-----~~~i~~~i~~~L~~a~--~~~~~I~~ViLvGG~sriP~v~~~l~~~f 394 (929)
+ ++ ..+.|+++.|. .++.|. ...+.++|.++|..+. +....++.|+|+||+|++|.++++|.+.+
T Consensus 243 p---dg--~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el 317 (375)
T 2fxu_A 243 P---DG--QVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEI 317 (375)
T ss_dssp T---TS--CEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHH
T ss_pred C---CC--CEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHH
Confidence 2 22 35788998883 344442 2458888888888663 22345678999999999999999999988
Q ss_pred C--------CccCCCCCchHHHHhhHHHHHH
Q psy7891 395 G--------VELSKNLNTDEAAALGAVYKAA 417 (929)
Q Consensus 395 ~--------~~i~~~~n~deaVA~GAa~~aa 417 (929)
+ .++....||+.++++||+++|.
T Consensus 318 ~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 318 TALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp HHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred HHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 6 1333567899999999999997
No 18
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.90 E-value=2.4e-22 Score=229.28 Aligned_cols=199 Identities=16% Similarity=0.131 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHHcCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCc
Q psy7891 175 IERQSMLKAGELAGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQ 254 (929)
Q Consensus 175 ~qR~al~~Aa~~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~ 254 (929)
..-+.+.+|++.|||++..++.||+|||++|...... +..+++||+||||||++|+. .| .
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~------~~gv~vvDiGggttdisi~~--------~g------~ 227 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPEK------DRGVVVVNLGYNFTGLIAYK--------NG------V 227 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHHH------HHCEEEEEECSSSEEEEEEE--------TT------E
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccccc------cCCEEEEEECCCcEEEEEEE--------CC------E
Confidence 4567899999999999999999999999998654322 56899999999999999987 24 2
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccCC-----CceeEEEeeccc
Q psy7891 255 VSVLGVGYDRTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSAN-----NEHFAQIEGLID 329 (929)
Q Consensus 255 ~~v~~~~~d~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~-----~~~~v~ie~l~~ 329 (929)
+.. ..+..+||++||+.|+..+.- ...+||++|+.++.. .+..+.++...+
T Consensus 228 ~~~---~~~i~~GG~~it~dIa~~l~~---------------------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~ 283 (419)
T 4a2a_A 228 PIK---ISYVPVGMKHVIKDVSAVLDT---------------------SFEESERLIITHGNAVYNDLKEEEIQYRGLDG 283 (419)
T ss_dssp EEE---EEEESCCHHHHHHHHHHHHTC---------------------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTTS
T ss_pred EEE---EEecccHHHHHHHHHHHHHCC---------------------CHHHHHHHHHHhccCcccCCCCceEEEeecCC
Confidence 322 335689999999999876521 145799999988642 344677776542
Q ss_pred CcceEEEEeHHHHHHHHHHHHhHHHHHHHHHHHHcCC------CCCCccEEEEEcCCcCCHHHHHHHHHHhCCcc--CC-
Q psy7891 330 EIDFKLLVTRAEFEALNEDLFDRVGYPVEQALKSSAV------PMDVISQVILVGAGTRVPKVQEKITKVVGVEL--SK- 400 (929)
Q Consensus 330 ~~d~~~~itR~efe~l~~~l~~~i~~~i~~~L~~a~~------~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i--~~- 400 (929)
.....|+|++|++++++.++++...|.++|+.++. ....++.|+|+||+|++|.|++.+++.||.++ ..
T Consensus 284 --~~~~~is~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~ 361 (419)
T 4a2a_A 284 --NTIKTTTAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCY 361 (419)
T ss_dssp --CSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCG
T ss_pred --ccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEec
Confidence 46789999999999999999999999999999987 34568999999999999999999999999533 22
Q ss_pred ----C----------CCchHHHHhhHHHHHHhh
Q psy7891 401 ----N----------LNTDEAAALGAVYKAADL 419 (929)
Q Consensus 401 ----~----------~n~deaVA~GAa~~aa~~ 419 (929)
+ -+|..+++.|.+++++..
T Consensus 362 ~~~~p~~~~~~~~~~~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 362 ANSDRPSIINADEVANDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp GGSSSCCCBTCHHHHTCGGGHHHHHTTCC----
T ss_pred CCCCchhccCcccccCCchHHHHHHHHHHHhhc
Confidence 1 378999999999887643
No 19
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.87 E-value=1.5e-21 Score=194.79 Aligned_cols=161 Identities=19% Similarity=0.286 Sum_probs=126.1
Q ss_pred ceeEEEEeeecceEEeeeccccCCCcceeEEEEecCCCccCceEEEEEEeccCc---eEEEEEeccCcCcCChhhhcccc
Q psy7891 426 KKFITKDIVLYPIQVEFERESESGDTKIIKRMLFGPSNTYPQKKILTFNKYVGD---FNFNVSYASEIEHLNPEQIAMLG 502 (929)
Q Consensus 426 k~~~v~d~~~~~i~i~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~~---~~i~i~~g~~~~~~~~~~~~~~g 502 (929)
..|.+.|++||+|||+|. |+ .+.+||++|++||++++.+|++..++ +.|.||+| ++... .+|.
T Consensus 18 ~~f~l~DV~P~slGie~~-----gg---~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqG-E~~~~--~dn~--- 83 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETL-----GG---VFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQG-EREMA--GDNK--- 83 (182)
T ss_dssp ------CBCSSCEEEECT-----TS---BEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEES-SCSBG--GGSE---
T ss_pred CCEEEEEecCCEEEEEEe-----CC---EEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEc-Ccccc--ccCc---
Confidence 468899999999999997 33 27899999999999999999987553 99999999 76532 2444
Q ss_pred ceeeeeEEecCCcccccCCCccccCCCceEEEEEeCCCccEEEEEeeeEEeccccccCccccccccccccccCCCCCCCC
Q psy7891 503 TKQISKFDVSGVSEAFGKHNEENAESKGIKAHFAMDESGILSLVNIELVVEKQEAAESPLSKLGNTLTSLFSRSKTDENE 582 (929)
Q Consensus 503 ~~~i~~~~i~gi~~~~~~~~~~~~~~~~i~v~f~ld~~Gil~v~~~e~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 582 (929)
.|++|.|.||++++++. ++|+|+|++|.||+|+|++.+ .+++
T Consensus 84 --~LG~f~l~gipp~p~G~-------~~IeVtf~iD~nGiL~VsA~d---------~~tg-------------------- 125 (182)
T 3n8e_A 84 --LLGQFTLIGIPPAPRGV-------PQIEVTFDIDANGIVHVSAKD---------KGTG-------------------- 125 (182)
T ss_dssp --EEEEEEECCCCCCCTTC-------SCEEEEEEECTTCCEEEEEEE---------TTTC--------------------
T ss_pred --eEEEEEEcCCCCCCCCC-------eeEEEEEEEecCCEEEEEEEE---------cCCC--------------------
Confidence 46677899999887665 689999999999999999874 1110
Q ss_pred CCcccccccCCCCCCCCCCCCCCchhhhhhhhhhhccCCCCCCCCCCCceeeeeccceeeEeecCCCCCCHHHHHHHHHH
Q psy7891 583 KPINEAVDEGNKTAEEPSKNVNSTESQQQSAEESVKNATQTPDADKKPKIVTVKEPISASETRYGVSTLNEKQVEKSLSK 662 (929)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~v~~~~~~~~~ls~~ei~~~~~~ 662 (929)
++. .|.|+ .. ..||++++++++++
T Consensus 126 ------------------------------------------------~~~----~i~I~---~~-~~Ls~eei~~mi~~ 149 (182)
T 3n8e_A 126 ------------------------------------------------REQ----QIVIQ---SS-GGLSKDDIENMVKN 149 (182)
T ss_dssp ------------------------------------------------CEE----EEEES---CC-CCCCHHHHHHHHHH
T ss_pred ------------------------------------------------CEe----eEEEe---cC-ccCCHHHHHHHHHH
Confidence 000 12222 23 67999999999999
Q ss_pred HHhhhHHHHHHHHHHHHHhhHHHHHHHHHhhh
Q psy7891 663 LDSLNQIEHAKVRKEKALNSLESLLFDAKSKL 694 (929)
Q Consensus 663 l~~~~~~D~~~~~~~eakN~LEs~iy~~r~~L 694 (929)
+++|..+|+.++++.++||+||+|+|++|+.|
T Consensus 150 a~~~~~eD~~~~~~~e~kn~le~~iy~~~~~l 181 (182)
T 3n8e_A 150 AEKYAEEDRRKKERVEAVNMAEGIIHDTETKM 181 (182)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHCCSCCC
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999877
No 20
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.84 E-value=1.7e-21 Score=215.56 Aligned_cols=227 Identities=13% Similarity=0.124 Sum_probs=147.9
Q ss_pred eeeeHHHHHHHHHHHHHHHHHhhcccccceEEEEecCC-CCHH--HH--HHHHHH------------HHHcCCcEEEEec
Q psy7891 134 ELYHVEELVAMLLHKAREYASVSAGQVINEAVIIVPGY-FNQI--ER--QSMLKA------------GELAGLKVLQLMN 196 (929)
Q Consensus 134 ~~~~~eel~a~~L~~lk~~a~~~~~~~v~~~VItVPa~-f~~~--qR--~al~~A------------a~~AGl~~~~li~ 196 (929)
..+++..+++.+ ..|+. +.. .+..+ ++|+++|.. |... || .++.+- ++.+++..+.++.
T Consensus 72 ~~~~~~~l~~i~-~aL~~-~~~-~~~~~-~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 147 (320)
T 2zgy_A 72 WQYSDVNVVAVH-HALLT-SGL-PVSEV-DIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP 147 (320)
T ss_dssp GGGSHHHHHHHH-HHHHH-HSC-CSCEE-EEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred ccchHHHHHHHH-HHHHH-cCC-CCceE-EEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence 467788777654 44443 211 22333 699999987 6531 21 112111 2345567889999
Q ss_pred hhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEEEEecCCCcchHHHHHHHH
Q psy7891 197 DYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVGYDRTLGGLEMQIRLR 276 (929)
Q Consensus 197 EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~~d~~lGG~~~D~~l~ 276 (929)
||.||+++|+.... . +..++|+|+||||||+++++ .| .+.+..+.++..+||.+||+.|+
T Consensus 148 e~~aa~~~~~~~~~-----~-~~~~~vvDiGggttd~~v~~--------~g------~~~v~~~~~~~~lGg~~~~~~I~ 207 (320)
T 2zgy_A 148 ESIPAGYEVLQELD-----E-LDSLLIIDLGGTTLDISQVM--------GK------LSGISKIYGDSSLGVSLVTSAVK 207 (320)
T ss_dssp SSHHHHHHHHHHSC-----T-TCEEEEEEECSSCEEEEEEE--------GG------GCCEEEEEEECSCCTHHHHHHHH
T ss_pred CcHHHHHhhhcccc-----C-CCCEEEEEcCCCeEEEEEEe--------CC------eeEEeeecCCccccHHHHHHHHH
Confidence 99999998873211 2 67999999999999999987 13 45566667778999999999999
Q ss_pred HHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHh-hhhccCCCceeEEEeecccCcceEEEEeHHHHHHHHHHHHhHHHH
Q psy7891 277 DFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRL-KNVLSANNEHFAQIEGLIDEIDFKLLVTRAEFEALNEDLFDRVGY 355 (929)
Q Consensus 277 ~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~-K~~LS~~~~~~v~ie~l~~~~d~~~~itR~efe~l~~~l~~~i~~ 355 (929)
+++.++ +.++. . ..++++ |.. ... .......+ . .-.++++.+++.+.++.+..
T Consensus 208 ~~l~~~-------~~~i~--~-------~~ae~~lk~~---~~~--~~~~~~i~---~--~~~~~~~~~~i~~~~~~~~~ 261 (320)
T 2zgy_A 208 DALSLA-------RTKGS--S-------YLADDIIIHR---KDN--NYLKQRIN---D--ENKISIVTEAMNEALRKLEQ 261 (320)
T ss_dssp HHTTCC-------SBGGG--H-------HHHHHHHHTT---TCH--HHHHHHSS---S--SCTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHc-------CCCCC--H-------HHHHHHHHHh---hhh--hcccceec---C--chhhHHHHHHHHHHHHHHHH
Confidence 998642 11222 1 123333 221 000 00000000 0 01345555666666666666
Q ss_pred HHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCC---ccCCCCCchHHHHhhHHHHH
Q psy7891 356 PVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGV---ELSKNLNTDEAAALGAVYKA 416 (929)
Q Consensus 356 ~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~---~i~~~~n~deaVA~GAa~~a 416 (929)
.|.+.+... .+++.|+|+||++++ +++.|++.|+. ++....||++|+|+||+++|
T Consensus 262 ~i~~~i~~~----~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 262 RVLNTLNEF----SGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp HHHHHHTTC----CCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred HHHHHHHhh----cCCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 666666542 578999999999998 99999999996 57788999999999999875
No 21
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.77 E-value=3.2e-18 Score=166.45 Aligned_cols=148 Identities=20% Similarity=0.293 Sum_probs=117.6
Q ss_pred EEEeeecceEEeeeccccCCCcceeEEEEecCCCccCceEEEEEEeccCc---eEEEEEeccCcCcCChhhhccccceee
Q psy7891 430 TKDIVLYPIQVEFERESESGDTKIIKRMLFGPSNTYPQKKILTFNKYVGD---FNFNVSYASEIEHLNPEQIAMLGTKQI 506 (929)
Q Consensus 430 v~d~~~~~i~i~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~~---~~i~i~~g~~~~~~~~~~~~~~g~~~i 506 (929)
+.|++||++||+|. |+ .+.+||++|++||++++.+|++..++ +.|.||+| ++... .+|. .|
T Consensus 2 ~~Dv~p~slGi~~~-----gg---~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqG-e~~~~--~dn~-----~L 65 (152)
T 3h0x_A 2 NADVNALTLGIETT-----GG---VMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEG-ERAMS--KDNN-----LL 65 (152)
T ss_dssp -CCBCSSCEEEEET-----TT---EEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEES-SCSBG--GGSE-----EE
T ss_pred ccceeccEEEEEEc-----CC---EEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEc-Ccccc--ccCc-----EE
Confidence 57999999999997 33 37899999999999999999987554 89999999 76532 2444 45
Q ss_pred eeEEecCCcccccCCCccccCCCceEEEEEeCCCccEEEEEeeeEEeccccccCccccccccccccccCCCCCCCCCCcc
Q psy7891 507 SKFDVSGVSEAFGKHNEENAESKGIKAHFAMDESGILSLVNIELVVEKQEAAESPLSKLGNTLTSLFSRSKTDENEKPIN 586 (929)
Q Consensus 507 ~~~~i~gi~~~~~~~~~~~~~~~~i~v~f~ld~~Gil~v~~~e~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 586 (929)
+.|.|.|+++++++. ++|+|+|++|.||+|+|++.+ .+++
T Consensus 66 G~f~l~gipp~p~G~-------~~I~Vtf~iD~nGiL~V~a~d---------~~tg------------------------ 105 (152)
T 3h0x_A 66 GKFELTGIPPAPRGV-------PQIEVTFALDANGILKVSATD---------KGTG------------------------ 105 (152)
T ss_dssp EEEEECCCCCCCTTC-------SCEEEEEEECTTSEEEEEEEE---------TTTC------------------------
T ss_pred EEEEEeCCCCCCCCC-------ceEEEEEEEcCCCEEEEEEEE---------cCCC------------------------
Confidence 667899999887665 689999999999999999874 1110
Q ss_pred cccccCCCCCCCCCCCCCCchhhhhhhhhhhccCCCCCCCCCCCceeeeeccceeeEeecCCCCCCHHHHHHHHHHHHhh
Q psy7891 587 EAVDEGNKTAEEPSKNVNSTESQQQSAEESVKNATQTPDADKKPKIVTVKEPISASETRYGVSTLNEKQVEKSLSKLDSL 666 (929)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~v~~~~~~~~~ls~~ei~~~~~~l~~~ 666 (929)
++. .+.+ ..+...||+++++++++.+++|
T Consensus 106 --------------------------------------------~~~----~i~I---~~~~~~ls~~ei~~~~~~a~~~ 134 (152)
T 3h0x_A 106 --------------------------------------------KSE----SITI---TNDKGRLTQEEIDRMVEEAEKF 134 (152)
T ss_dssp --------------------------------------------CEE----EEEE---ECCTTCCCHHHHHHHHHHHHHT
T ss_pred --------------------------------------------cEe----EEEE---ecCCCCCCHHHHHHHHHHHHHH
Confidence 001 1222 2233579999999999999999
Q ss_pred hHHHHHHHHHHHHHhhHH
Q psy7891 667 NQIEHAKVRKEKALNSLE 684 (929)
Q Consensus 667 ~~~D~~~~~~~eakN~LE 684 (929)
..+|+..+++.++||+||
T Consensus 135 ~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 135 ASEDASIKAKVESRNKLE 152 (152)
T ss_dssp HHHHHHHHHHHHCSCCCC
T ss_pred HHhhHHHHHHHHHHhhcC
Confidence 999999999999999987
No 22
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.76 E-value=3.4e-18 Score=165.97 Aligned_cols=148 Identities=20% Similarity=0.317 Sum_probs=114.1
Q ss_pred EEEeeecceEEeeeccccCCCcceeEEEEecCCCccCceEEEEEEeccCc---eEEEEEeccCcCcCChhhhccccceee
Q psy7891 430 TKDIVLYPIQVEFERESESGDTKIIKRMLFGPSNTYPQKKILTFNKYVGD---FNFNVSYASEIEHLNPEQIAMLGTKQI 506 (929)
Q Consensus 430 v~d~~~~~i~i~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~~---~~i~i~~g~~~~~~~~~~~~~~g~~~i 506 (929)
+.|++||++||+|. |+ .+.+||++|++||++++.+|++..++ +.|.||+| ++... .+|. .|
T Consensus 2 ~~Dv~p~slGie~~-----gg---~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqG-e~~~~--~dn~-----~L 65 (152)
T 3dob_A 2 NADVAPLSLGIETA-----GG---VMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEG-ERAMT--RDNH-----RL 65 (152)
T ss_dssp --CBCSSCEEEEET-----TT---EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEES-SCSBG--GGSE-----EE
T ss_pred ceeeecceEEEEEc-----CC---EEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEc-Ccccc--ccCc-----ee
Confidence 67999999999997 33 37899999999999999999987554 89999999 77642 3444 45
Q ss_pred eeEEecCCcccccCCCccccCCCceEEEEEeCCCccEEEEEeeeEEeccccccCccccccccccccccCCCCCCCCCCcc
Q psy7891 507 SKFDVSGVSEAFGKHNEENAESKGIKAHFAMDESGILSLVNIELVVEKQEAAESPLSKLGNTLTSLFSRSKTDENEKPIN 586 (929)
Q Consensus 507 ~~~~i~gi~~~~~~~~~~~~~~~~i~v~f~ld~~Gil~v~~~e~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 586 (929)
+.|.|.||++++++. ++|+|+|++|.||+|+|++.+ .+++
T Consensus 66 G~f~l~gipp~p~G~-------~~IeVtf~iD~nGiL~Vsa~d---------~~tg------------------------ 105 (152)
T 3dob_A 66 GTFELSGIPPAPRGV-------PQIEVTFNIDANGILNVSAED---------KSTG------------------------ 105 (152)
T ss_dssp EEEEEECCCCCCTTC-------CCEEEEEEECTTCCEEEEEEE---------TTTC------------------------
T ss_pred EEEEEeCCCCCCCCC-------ceEEEEEEeCCCCeEEEEEEE---------cCCC------------------------
Confidence 667899999887665 689999999999999999874 1110
Q ss_pred cccccCCCCCCCCCCCCCCchhhhhhhhhhhccCCCCCCCCCCCceeeeeccceeeEeecCCCCCCHHHHHHHHHHHHhh
Q psy7891 587 EAVDEGNKTAEEPSKNVNSTESQQQSAEESVKNATQTPDADKKPKIVTVKEPISASETRYGVSTLNEKQVEKSLSKLDSL 666 (929)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~v~~~~~~~~~ls~~ei~~~~~~l~~~ 666 (929)
++.. +.+ ..+...||+++++++++.+++|
T Consensus 106 --------------------------------------------~~~~----i~I---~~~~~~Ls~~ei~~~~~~a~~~ 134 (152)
T 3dob_A 106 --------------------------------------------KSNR----ITI---QNEKGRLTQSDIDRMVHEAKQF 134 (152)
T ss_dssp --------------------------------------------CEEE----EEE---CCC----CHHHHHHHHHHHHHT
T ss_pred --------------------------------------------CEEE----EEE---EcCCCCCCHHHHHHHHHHHHHH
Confidence 0001 111 1233469999999999999999
Q ss_pred hHHHHHHHHHHHHHhhHH
Q psy7891 667 NQIEHAKVRKEKALNSLE 684 (929)
Q Consensus 667 ~~~D~~~~~~~eakN~LE 684 (929)
..+|++.+++.++||+||
T Consensus 135 ~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 135 EKEDGEQRERVQARNQLE 152 (152)
T ss_dssp HHHHHHHHHTCCCCSEEC
T ss_pred HHhhHHHHHHHHHHhhcC
Confidence 999999999999999986
No 23
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.74 E-value=3.7e-18 Score=165.51 Aligned_cols=147 Identities=18% Similarity=0.247 Sum_probs=116.4
Q ss_pred EEEeeecceEEeeeccccCCCcceeEEEEecCCCccCceEEEEEEeccCc---eEEEEEeccCcCcCChhhhccccceee
Q psy7891 430 TKDIVLYPIQVEFERESESGDTKIIKRMLFGPSNTYPQKKILTFNKYVGD---FNFNVSYASEIEHLNPEQIAMLGTKQI 506 (929)
Q Consensus 430 v~d~~~~~i~i~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~~---~~i~i~~g~~~~~~~~~~~~~~g~~~i 506 (929)
+.|++||++||+|. |+ .+.+||++|++||++++.+|++..++ +.|.||+| ++... .+|. .|
T Consensus 2 ~~DV~p~slGie~~-----gg---~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqG-e~~~~--~dn~-----~L 65 (151)
T 3dqg_A 2 NADVTPLSLGIETL-----GG---IMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQG-EREMA--TSNK-----LL 65 (151)
T ss_dssp --CBCSSCEEEEET-----TT---EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEES-SCSBG--GGSE-----EE
T ss_pred cceeeeeEEEEEEc-----CC---EEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEc-CCccc--ccCc-----EE
Confidence 57999999999997 33 37899999999999999999987554 99999999 77532 2444 45
Q ss_pred eeEEecCCcccccCCCccccCCCceEEEEEeCCCccEEEEEeeeEEeccccccCccccccccccccccCCCCCCCCCCcc
Q psy7891 507 SKFDVSGVSEAFGKHNEENAESKGIKAHFAMDESGILSLVNIELVVEKQEAAESPLSKLGNTLTSLFSRSKTDENEKPIN 586 (929)
Q Consensus 507 ~~~~i~gi~~~~~~~~~~~~~~~~i~v~f~ld~~Gil~v~~~e~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 586 (929)
+.|.|.|+++++++. ++|+|+|++|.||+|+|++.+ .+++
T Consensus 66 G~f~l~gipp~p~G~-------~~IeVtf~iD~nGiL~Vsa~d---------~~tg------------------------ 105 (151)
T 3dqg_A 66 GQFSLVGIPPAPRGV-------PQVEVTFDIDANGIVNVSARD---------RGTG------------------------ 105 (151)
T ss_dssp EEEEEECCCCCCTTC-------SCEEEEEEECTTSEEEEEEEE---------TTTC------------------------
T ss_pred EEEEEeCCCCCCCCC-------cEEEEEEEeccCcEEEEEEEE---------ccCC------------------------
Confidence 667899999887665 689999999999999999874 1110
Q ss_pred cccccCCCCCCCCCCCCCCchhhhhhhhhhhccCCCCCCCCCCCceeeeeccceeeEeecCCCCCCHHHHHHHHHHHHhh
Q psy7891 587 EAVDEGNKTAEEPSKNVNSTESQQQSAEESVKNATQTPDADKKPKIVTVKEPISASETRYGVSTLNEKQVEKSLSKLDSL 666 (929)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~v~~~~~~~~~ls~~ei~~~~~~l~~~ 666 (929)
++. .+.++ .+ ..||+++++++++.+++|
T Consensus 106 --------------------------------------------~~~----~i~I~---~~-~~Ls~~ei~~~~~~a~~~ 133 (151)
T 3dqg_A 106 --------------------------------------------KEQ----QIVIQ---SS-GGLSKDQIENMIKEAEKN 133 (151)
T ss_dssp --------------------------------------------CEE----EEEEE---CS-SSSCHHHHHHHHHHHHHH
T ss_pred --------------------------------------------CEe----EEEEe---cC-CCCCHHHHHHHHHHHHHH
Confidence 000 12222 23 679999999999999999
Q ss_pred hHHHHHHHHHHHHHhhHH
Q psy7891 667 NQIEHAKVRKEKALNSLE 684 (929)
Q Consensus 667 ~~~D~~~~~~~eakN~LE 684 (929)
..+|++.+++.++||+||
T Consensus 134 ~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 134 AAEDAKRKELVEVINQAE 151 (151)
T ss_dssp HHHHTTCCCEEECBCCCC
T ss_pred HHHhHHHHHHHHHHhhcC
Confidence 999999999999999986
No 24
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.73 E-value=7.8e-19 Score=199.68 Aligned_cols=212 Identities=14% Similarity=0.129 Sum_probs=88.7
Q ss_pred ceEEEEecCCCCHHHHHHHHHHH-HHcCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEe
Q psy7891 162 NEAVIIVPGYFNQIERQSMLKAG-ELAGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQV 240 (929)
Q Consensus 162 ~~~VItVPa~f~~~qR~al~~Aa-~~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~ 240 (929)
..++||+|++++..+|+++.+++ +.+|++.+.++++|+|||++++. ...+|+|+|+|+|+++.+.
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~-----------~~~lVVDiG~g~T~v~pv~--- 170 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL-----------LTGVVVDSGDGVTHICPVY--- 170 (394)
T ss_dssp ------------------------------------------------------------CCEEEECSSCEEEECEE---
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC-----------ceEEEEEcCCCceEeeeeE---
Confidence 35999999999999999999865 78899999999999999988873 3459999999999998775
Q ss_pred eccccCCcccCCCcEEEEEEecCCCcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccCCC--
Q psy7891 241 VKTKERGFVETHPQVSVLGVGYDRTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSANN-- 318 (929)
Q Consensus 241 ~~~~~~G~~~~~~~~~v~~~~~d~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~-- 318 (929)
.| .+ +........+||+++|..|.++|..+-. .. ...... ..++.+|+.+..-.
T Consensus 171 -----~G------~~-~~~~~~~~~~GG~~lt~~l~~~l~~~~~---~~--~~~~~~-------~~ae~iK~~~~~v~~d 226 (394)
T 1k8k_B 171 -----EG------FS-LPHLTRRLDIAGRDITRYLIKLLLLRGY---AF--NHSADF-------ETVRMIKEKLCYVGYN 226 (394)
T ss_dssp -----TT------EE-CSTTCEEESCCHHHHHHHHHHHHHHTTC---CC--CTTTTH-------HHHHHHHHHHCCCCSS
T ss_pred -----CC------EE-cccceEEeeccHHHHHHHHHHHHHhcCC---CC--CcHHHH-------HHHHHHHHhheeEecC
Confidence 24 11 1111123479999999999999976421 11 101122 23444444443211
Q ss_pred --------------ceeEEEeecccCcceEEEEeHHHHHHHHHHHH---------hHHHHHHHHHHHHcCCC--CCCccE
Q psy7891 319 --------------EHFAQIEGLIDEIDFKLLVTRAEFEALNEDLF---------DRVGYPVEQALKSSAVP--MDVISQ 373 (929)
Q Consensus 319 --------------~~~v~ie~l~~~~d~~~~itR~efe~l~~~l~---------~~i~~~i~~~L~~a~~~--~~~I~~ 373 (929)
...+.+ -++ ..++|+++.|. +.+.+| ..+.+.|.++|..+... .+-++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~l---pdg--~~i~i~~erf~-~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~n 300 (394)
T 1k8k_B 227 IEQEQKLALETTVLVESYTL---PDG--RIIKVGGERFE-APEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKH 300 (394)
T ss_dssp HHHHHHHHHHCSTTCEEEEC---TTS--CEEEECTHHHH-TGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTT
T ss_pred HHHHHHhhccCCcCceEEEC---CCC--CEEEECchhhc-ChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhC
Confidence 111222 122 35678888874 333332 35788888888887432 334577
Q ss_pred EEEEcCCcCCHHHHHHHHHHhCC-----------------cc--CCCCCchHHHHhhHHHHHH
Q psy7891 374 VILVGAGTRVPKVQEKITKVVGV-----------------EL--SKNLNTDEAAALGAVYKAA 417 (929)
Q Consensus 374 ViLvGG~sriP~v~~~l~~~f~~-----------------~i--~~~~n~deaVA~GAa~~aa 417 (929)
|+|+||+|++|.+.++|.+.++. ++ ..+.++..++.+||+++|.
T Consensus 301 IvLtGG~s~~~G~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 301 IVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp CEEESGGGCSTTHHHHHHHHHHHHHHHHTCSSCCCTTCCCCC---------------------
T ss_pred EEEeCcccccccHHHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 99999999999999998887752 12 2244667899999998886
No 25
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.73 E-value=1.9e-17 Score=179.22 Aligned_cols=184 Identities=17% Similarity=0.193 Sum_probs=124.4
Q ss_pred HcCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEEEEecCCC
Q psy7891 186 LAGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVGYDRT 265 (929)
Q Consensus 186 ~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~~d~~ 265 (929)
+++...+..|+|++|+|+++.... +....|+|+|||+++++++.. .| .+++...+++..
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~--------~~~~~vl~lgG~~~~~~~~~~-------~g------~~~~~~~~~~~~ 126 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFII--------PETRTIIDIGGQDAKVLKLDN-------NG------RLLNFLMNDKCA 126 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHS--------TTCCEEEEECSSCEEEEEECT-------TS------CEEEEEEECSCS
T ss_pred HHhhCCCcccchHHHHHHHHHHhC--------CCCCeEEEEcCCCceEEEEEe-------cC------ceEEEEeCCCcC
Confidence 467778899999999998876543 233478999999999988741 24 688888889999
Q ss_pred cchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhh--hccCCCceeEE---EeecccCcceEEEEeHH
Q psy7891 266 LGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKN--VLSANNEHFAQ---IEGLIDEIDFKLLVTRA 340 (929)
Q Consensus 266 lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~--~LS~~~~~~v~---ie~l~~~~d~~~~itR~ 340 (929)
.||.+|+..++++|.-.|..... + +..++. .++........ +..+..+ .
T Consensus 127 ~g~G~f~d~~a~~l~~~~~~~~~--------------~---~~~a~~~~~i~~~~~~f~~s~~~~~~~~~---------~ 180 (276)
T 4ehu_A 127 AGTGRFLDVMAKIIEVDVSELGS--------------I---SMNSQNEVSISSTCTVFAESEVISHLSEN---------A 180 (276)
T ss_dssp TTSHHHHHHHHHHHTCCGGGHHH--------------H---HTTCSSCCCCCCCSHHHHHHHHHHHHHTT---------C
T ss_pred cchhhHHHHHHHHhccChhhhHH--------------H---HhcCCCCCCcCCccchhhhhHHHHhhhcc---------c
Confidence 99999999999998655543110 0 001110 01100000000 0000000 1
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHHHhhc
Q psy7891 341 EFEALNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYKAADLS 420 (929)
Q Consensus 341 efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~aa~~s 420 (929)
..++++..+...+.+.+....... ..++.|+|+||.+++|.|++.|++.||.++..+.||++++|+|||++|....
T Consensus 181 ~~~di~a~~~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 181 KIEDIVAGIHTSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 124556666665555554444433 3567899999999999999999999999999999999999999999997544
No 26
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.71 E-value=9.4e-17 Score=156.92 Aligned_cols=148 Identities=20% Similarity=0.290 Sum_probs=115.6
Q ss_pred EEEeeecceEEeeeccccCCCcceeEEEEecCCCccCceEEEEEEeccCc---eEEEEEeccCcCcCChhhhccccceee
Q psy7891 430 TKDIVLYPIQVEFERESESGDTKIIKRMLFGPSNTYPQKKILTFNKYVGD---FNFNVSYASEIEHLNPEQIAMLGTKQI 506 (929)
Q Consensus 430 v~d~~~~~i~i~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~~---~~i~i~~g~~~~~~~~~~~~~~g~~~i 506 (929)
+.|++||+|||++. +| .+.+||++|+++|++++.+|++..++ +.|.|||| +.... .+|. .|
T Consensus 2 v~Dv~p~slGi~~~----~g----~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qG-e~~~~--~~n~-----~l 65 (152)
T 2op6_A 2 NADVNPLTLGIETV----GG----VMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEG-ERPMV--MDNH-----KL 65 (152)
T ss_dssp -CCBCSSCEEEEET----TT----EEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEES-SCSBG--GGSE-----EE
T ss_pred ceEeecccEEEEEe----CC----EEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEe-CCccC--ccCC-----Ee
Confidence 57999999999997 22 37899999999999999999987553 99999999 76532 2343 45
Q ss_pred eeEEecCCcccccCCCccccCCCceEEEEEeCCCccEEEEEeeeEEeccccccCccccccccccccccCCCCCCCCCCcc
Q psy7891 507 SKFDVSGVSEAFGKHNEENAESKGIKAHFAMDESGILSLVNIELVVEKQEAAESPLSKLGNTLTSLFSRSKTDENEKPIN 586 (929)
Q Consensus 507 ~~~~i~gi~~~~~~~~~~~~~~~~i~v~f~ld~~Gil~v~~~e~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 586 (929)
+.|.|.|+++++++. ++|+|+|++|.||+|+|++.+. .+.
T Consensus 66 g~~~l~gipp~p~G~-------~~I~V~f~id~nGiL~V~a~d~---------~tg------------------------ 105 (152)
T 2op6_A 66 GNFDVTGIPPAPRGV-------PQIEVTFEIDVNGILHVSAEDK---------GTG------------------------ 105 (152)
T ss_dssp EEEEECCCCCCCTTC-------SCEEEEEEECTTSCEEEEEEET---------TTC------------------------
T ss_pred EEEEEECCCCCCCCC-------ceEEEEEEECCCcEEEEEEEEe---------cCC------------------------
Confidence 677899999876554 5899999999999999998741 100
Q ss_pred cccccCCCCCCCCCCCCCCchhhhhhhhhhhccCCCCCCCCCCCceeeeeccceeeEeecCCCCCCHHHHHHHHHHHHhh
Q psy7891 587 EAVDEGNKTAEEPSKNVNSTESQQQSAEESVKNATQTPDADKKPKIVTVKEPISASETRYGVSTLNEKQVEKSLSKLDSL 666 (929)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~v~~~~~~~~~ls~~ei~~~~~~l~~~ 666 (929)
++. .+.+. .....||+++++++++++.+|
T Consensus 106 --------------------------------------------~~~----~i~i~---~~~~~ls~eei~~~~~~~~~~ 134 (152)
T 2op6_A 106 --------------------------------------------NKN----KLTIT---NDHNRLSPEDIERMINDADKF 134 (152)
T ss_dssp --------------------------------------------CEE----EEEEC---SSSSCCCHHHHHHHHHHHHHT
T ss_pred --------------------------------------------cEE----EEEee---ccccCCCHHHHHHHHHHHHHh
Confidence 000 12221 223569999999999999999
Q ss_pred hHHHHHHHHHHHHHhhHH
Q psy7891 667 NQIEHAKVRKEKALNSLE 684 (929)
Q Consensus 667 ~~~D~~~~~~~eakN~LE 684 (929)
..+|+..+++.++||+||
T Consensus 135 ~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 135 AADDQAQKEKVESRNELE 152 (152)
T ss_dssp HHHHHHHHHHSCCCSEEC
T ss_pred HhccHHHHHHHHHHhhcC
Confidence 999999999999999986
No 27
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.66 E-value=4.2e-16 Score=173.95 Aligned_cols=210 Identities=14% Similarity=0.131 Sum_probs=140.2
Q ss_pred ceEEEEecCCCCHHHH-HHHHHHHHHcCC------------cEEEEechhHHHHHHhcccccccC-CCCCCcEEEEEEcC
Q psy7891 162 NEAVIIVPGYFNQIER-QSMLKAGELAGL------------KVLQLMNDYTAVALNYGIFKRKDF-NETNPVHVMFYDMG 227 (929)
Q Consensus 162 ~~~VItVPa~f~~~qR-~al~~Aa~~AGl------------~~~~li~EptAAAl~y~~~~~~~~-~~~~~~~vlv~D~G 227 (929)
..+|+.+|..+...+| +++++++...+- ..+.++.||.||+++|+....... ... +..++|+|+|
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~-~~~~~vvDiG 192 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFT-EGKYSVLDFG 192 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHH-TCEEEEEEEC
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccc-cCcEEEEEeC
Confidence 3789999999998887 589999875543 457899999999999976431100 001 6899999999
Q ss_pred CceEEEEEEEEEeeccccCCcccCCCcEEEEEEecCCCcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHH
Q psy7891 228 AWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVGYDRTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEA 307 (929)
Q Consensus 228 ggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~~d~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~a 307 (929)
|||||++++. .| .-+....+...+||..++..|.+++.+++.. ..+. .. ..
T Consensus 193 ggTtd~~v~~--------~~-------~~~~~~s~s~~~G~~~~~~~i~~~l~~~~~g-----~~l~--~~-------~i 243 (355)
T 3js6_A 193 SGTTIIDTYQ--------NM-------KRVEEESFVINKGTIDFYKRIASHVSKKSEG-----ASIT--PR-------MI 243 (355)
T ss_dssp SSCEEEEEEE--------TT-------EECGGGCEEESCCHHHHHHHHHHHTC-------------C--HH-------HH
T ss_pred CCcEEEEEEc--------CC-------EEccccccCcchHHHHHHHHHHHHHHHhcCC-----CcCC--HH-------HH
Confidence 9999999984 13 1111112235799999999999999876421 1122 11 11
Q ss_pred HHhhhhccCCCceeEEEeecccCcceEEEEeHHHHHHHHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHH--
Q psy7891 308 GRLKNVLSANNEHFAQIEGLIDEIDFKLLVTRAEFEALNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPK-- 385 (929)
Q Consensus 308 ek~K~~LS~~~~~~v~ie~l~~~~d~~~~itR~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~-- 385 (929)
++.+. . .... . +..-.+.+ .+.+++.+++++++|...|++.+.+ ++.++.|+|+||++.++.
T Consensus 244 ~~g~~-~--------~~~~-~-~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~ 307 (355)
T 3js6_A 244 EKGLE-Y--------KQCK-L-NQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDS 307 (355)
T ss_dssp HSCCC------------------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHH
T ss_pred hcCCc-c--------cccc-c-cccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhh
Confidence 11111 0 0000 0 00001122 3457778888888888888888763 467899999999999998
Q ss_pred HHHHHHHHhCCccCCCCCchHHHHhhHHHHHHhhcC
Q psy7891 386 VQEKITKVVGVELSKNLNTDEAAALGAVYKAADLST 421 (929)
Q Consensus 386 v~~~l~~~f~~~i~~~~n~deaVA~GAa~~aa~~s~ 421 (929)
|++.|++.|+.. .||..|+|+|+..++..+..
T Consensus 308 l~~~i~~~~~~~----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 308 LSHYYSDVFEKA----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp HHHHSSSCEECC----SSGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCC----CCcHHHHHHHHHHHHHHHHh
Confidence 888998888532 89999999999999887653
No 28
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.46 E-value=4e-14 Score=156.58 Aligned_cols=203 Identities=14% Similarity=0.114 Sum_probs=139.2
Q ss_pred ceEEEEecCCCCH--HHHHHHHHHHHHc--------C------CcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEE
Q psy7891 162 NEAVIIVPGYFNQ--IERQSMLKAGELA--------G------LKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYD 225 (929)
Q Consensus 162 ~~~VItVPa~f~~--~qR~al~~Aa~~A--------G------l~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D 225 (929)
..+|+++|..+.. .+|+.+++....- | +..+.++.|+.+|.+.+. . .+ . ...++|+|
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~--~--~~--~-~~~v~vvD 178 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ--E--NF--K-NKNVAVID 178 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC--C--CC--T-TCEEEEEE
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc--h--hh--c-cCCEEEEE
Confidence 3789999998764 3677777766521 2 134678899988876652 1 11 2 68999999
Q ss_pred cCCceEEEEEEEEEeeccccCCcccCCCcEEEEEEecCCCcchHHHHHHHHHHHHH-HhhhhcccCCCccCCHHHHHHHH
Q psy7891 226 MGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVGYDRTLGGLEMQIRLRDFLGK-KFNEMKKTTKDVFENPRAVAKLF 304 (929)
Q Consensus 226 ~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~~d~~lGG~~~D~~l~~~l~~-~f~~~~~~~~d~~~~~~~~~kL~ 304 (929)
+||||||++++. .| .+ +....+...+||.++++.|++++.. ++.. .+..
T Consensus 179 iGggTtd~~v~~--------~g------~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~~g~------~i~~--------- 228 (329)
T 4apw_A 179 FGGLNMGFSLYR--------NC------VV-NPSERFIEEHGVKDLIIRVGDALTDLNNGN------LITN--------- 228 (329)
T ss_dssp ECSSCEEEEEEE--------TT------EE-CGGGCEEESCCHHHHHHHHHTSSSSCSSCS------CTTS---------
T ss_pred eCCCcEEEEEEE--------CC------EE-eeccccchhhHHHHHHHHHHHHHHhhccCC------CCCH---------
Confidence 999999999987 13 22 2222234579999999999998876 4432 2211
Q ss_pred HHHHHhhhhccCCCceeEEEeecccCcceEEEEeHHHHHHHHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCH
Q psy7891 305 KEAGRLKNVLSANNEHFAQIEGLIDEIDFKLLVTRAEFEALNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVP 384 (929)
Q Consensus 305 ~~aek~K~~LS~~~~~~v~ie~l~~~~d~~~~itR~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP 384 (929)
..++++|+. .. .. .+.++ ..+..+++++.+++++++|...|++. +..++.++.|+|+||++.+
T Consensus 229 ~~~e~i~~~--g~--~~-------~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l- 291 (329)
T 4apw_A 229 EQAESALNN--GY--MK-------KGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK- 291 (329)
T ss_dssp BTTTTCSSS--CS--SC-------EECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH-
T ss_pred HHHHHHHhc--CC--cc-------cCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH-
Confidence 024444432 11 10 01111 13457778888888888887777765 3556668999999999998
Q ss_pred HHHHHHHHHhCCccCCCCCchHHHHhhHHHHHHhh
Q psy7891 385 KVQEKITKVVGVELSKNLNTDEAAALGAVYKAADL 419 (929)
Q Consensus 385 ~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~aa~~ 419 (929)
+.+.|++.|+..+...-||..|+|+|+..++.+.
T Consensus 292 -~~~~l~~~~~~~v~v~~~P~~a~a~G~~~~~~~k 325 (329)
T 4apw_A 292 -LKEQISKTYPNNSIITNNSQWTTCEGLYKVAVAK 325 (329)
T ss_dssp -HHHHHHHHSTTCEECCSSGGGHHHHHHHHHHHHH
T ss_pred -HHHHHHHHcCCCCEecCCChhhHHHHHHHHHhhh
Confidence 6699999999667778899999999998887643
No 29
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.33 E-value=1.6e-12 Score=148.38 Aligned_cols=242 Identities=12% Similarity=0.060 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHHHHHhhcccc--cceEEEEecCCCCHHHHHHHHHHH-HHcCCcEEEEechhHHHHHHhcccccccCCCC
Q psy7891 140 ELVAMLLHKAREYASVSAGQV--INEAVIIVPGYFNQIERQSMLKAG-ELAGLKVLQLMNDYTAVALNYGIFKRKDFNET 216 (929)
Q Consensus 140 el~a~~L~~lk~~a~~~~~~~--v~~~VItVPa~f~~~qR~al~~Aa-~~AGl~~~~li~EptAAAl~y~~~~~~~~~~~ 216 (929)
+.+..+++|+.. ..++.. -..++||.|+..+...|+.+.+.+ +..|+.-+.++.++.+|+++.+..... ...
T Consensus 103 d~~e~iw~~~~~---~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~--~~~ 177 (427)
T 3dwl_A 103 DHMERFWQQSLF---KYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKV--TDR 177 (427)
T ss_dssp HHHHHHHHHHHH---TTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTT--CSC
T ss_pred HHHHHHHHHHHh---HhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccc--cCC
Confidence 344556665542 223322 247999999999999999999988 789999999999999999888743211 111
Q ss_pred CCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEEEEecCCCcchHHHHHHHHHHHHHHhhhhcccCCCccCC
Q psy7891 217 NPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVGYDRTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFEN 296 (929)
Q Consensus 217 ~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~~d~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~ 296 (929)
..+-||+|+|+|+|+++.|. .|. -+....-...+||+++|..|.++|..+... ...
T Consensus 178 -~~tglVVDiG~g~T~v~PV~--------~G~-------~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~--------~~~ 233 (427)
T 3dwl_A 178 -SLTGTVVDSGDGVTHIIPVA--------EGY-------VIGSSIKTMPLAGRDVTYFVQSLLRDRNEP--------DSS 233 (427)
T ss_dssp -CCCEEEEEESSSCEEEEEEE--------TTE-------ECGGGCEEESCCHHHHHHHHHHTTC----------------
T ss_pred -CceEEEEECCCCceEEEEEE--------CCE-------EehhhheeccccHHHHHHHHHHHHHHcCCC--------chh
Confidence 35679999999999999984 241 111111123699999999999888654322 000
Q ss_pred HHHHHHHHHHHHHhhhhccCCCce-----------eEEEee--c--ccCcceEEEEeHHHHH---HHHHHH------HhH
Q psy7891 297 PRAVAKLFKEAGRLKNVLSANNEH-----------FAQIEG--L--IDEIDFKLLVTRAEFE---ALNEDL------FDR 352 (929)
Q Consensus 297 ~~~~~kL~~~aek~K~~LS~~~~~-----------~v~ie~--l--~~~~d~~~~itR~efe---~l~~~l------~~~ 352 (929)
...++.+|+.+..-... ...+.. + .++....++|..+.|. .+++|- ...
T Consensus 234 -------~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~g 306 (427)
T 3dwl_A 234 -------LKTAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTP 306 (427)
T ss_dssp -------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSC
T ss_pred -------HHHHHHHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCC
Confidence 12344444444321100 000110 1 1233345677777763 334431 235
Q ss_pred HHHHHHHHHHHcCCC--CCCccEEEEEcCCcCCHHHHHHHHHHhC----------------------CccCCCCCchHHH
Q psy7891 353 VGYPVEQALKSSAVP--MDVISQVILVGAGTRVPKVQEKITKVVG----------------------VELSKNLNTDEAA 408 (929)
Q Consensus 353 i~~~i~~~L~~a~~~--~~~I~~ViLvGG~sriP~v~~~l~~~f~----------------------~~i~~~~n~deaV 408 (929)
|.++|.++|.++..+ .+-...|+|+||+|.+|.+.++|.+.+. .++..+.+...++
T Consensus 307 I~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~ 386 (427)
T 3dwl_A 307 LPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAV 386 (427)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHH
T ss_pred ccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccce
Confidence 788888888876431 1123569999999999999888877652 1222334667899
Q ss_pred HhhHHHHHH
Q psy7891 409 ALGAVYKAA 417 (929)
Q Consensus 409 A~GAa~~aa 417 (929)
=+|++++|.
T Consensus 387 WiGGSilas 395 (427)
T 3dwl_A 387 WFGGSLLAQ 395 (427)
T ss_dssp HHHHHHHHH
T ss_pred ecCceeecc
Confidence 999999986
No 30
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.33 E-value=3.7e-11 Score=138.41 Aligned_cols=179 Identities=14% Similarity=0.097 Sum_probs=119.9
Q ss_pred CeEEEEEcCccceEEEEEECCCceEEeeCCCCCccceEEEEEec----CceeecHHHHHhhhhCCCChHhhhHHhcCCCC
Q psy7891 25 IAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHK----GERTFGEDAQIIGTRFPSNSYGYFLDLLGKSI 100 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~g~~~~iv~n~~~~r~~PS~V~~~~----~~~~~G~~A~~~~~~~p~~t~~~~K~llG~~~ 100 (929)
...|+||+||.++++++...+.|.- .+||+|+... ...+||.++.... +.
T Consensus 23 ~~~iVID~GS~~~kaG~ag~~~P~~---------v~PSvVg~~~~~~~~~~~vG~e~~~~~---r~-------------- 76 (498)
T 3qb0_A 23 VSAVVIDPGSYTTNIGYSGSDFPQS---------ILPSVYGKYTADEGNKKIFSEQSIGIP---RK-------------- 76 (498)
T ss_dssp BSCEEEECCSSEEEEEETTCSSCSE---------EEESEEEEESSCSSCCEECCTTGGGSC---CT--------------
T ss_pred CCeEEEECCCcEEEEEECCCCCeee---------ecCceeEEeccCCCccEEEecHHHhcC---cC--------------
Confidence 4578999999999999886664432 3699999842 2467777533210 00
Q ss_pred CCHHHHhhhhcCCceeeecCCCcceEEEEcCCceeeeHHHHHHHHHHHHHHHHHhhccc--ccc-eEEEEecCCCCHHHH
Q psy7891 101 DSPVVQLFKSRFPYYDIVADEERGTIVFKTNDNELYHVEELVAMLLHKAREYASVSAGQ--VIN-EAVIIVPGYFNQIER 177 (929)
Q Consensus 101 ~d~~v~~~~~~~p~~~~~~~~~~~~v~~~~~~~~~~~~eel~a~~L~~lk~~a~~~~~~--~v~-~~VItVPa~f~~~qR 177 (929)
.-.+...+..|. +.--+.+..+++|+... .++. .-. .++||.|+......|
T Consensus 77 ----------------------~l~l~~Pi~~Gv-I~dwd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~R 130 (498)
T 3qb0_A 77 ----------------------DYELKPIIENGL-VIDWDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENR 130 (498)
T ss_dssp ----------------------TEEEEESEETTE-ESCHHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHH
T ss_pred ----------------------ceEEeccCcCCE-EccHHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHH
Confidence 001122222232 22234455666666532 2331 123 589999999999999
Q ss_pred HHHHHHH-HHcCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEE
Q psy7891 178 QSMLKAG-ELAGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVS 256 (929)
Q Consensus 178 ~al~~Aa-~~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~ 256 (929)
+.+.+.+ +..|+.-+.++.++.||++++|.. +-||+|+|+|+|+++.|. .| +-
T Consensus 131 e~~~eilFE~f~vpav~l~~~~vlalya~G~~-----------tglVVDiG~g~T~vvPI~--------~G-------~~ 184 (498)
T 3qb0_A 131 KKSLEVLLEGMQFEACYLAPTSTCVSFAAGRP-----------NCLVVDIGHDTCSVSPIV--------DG-------MT 184 (498)
T ss_dssp HHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS-----------SEEEEEECSSCEEEEEEE--------TT-------EE
T ss_pred HHHHHHHHhhcCCCeEeecchHHHHHHHcCCC-----------eEEEEEcCCCcEEEEEEe--------CC-------EE
Confidence 9999975 789999999999999999888741 239999999999999885 24 11
Q ss_pred EEEEecCCCcchHHHHHHHHHHHHH
Q psy7891 257 VLGVGYDRTLGGLEMQIRLRDFLGK 281 (929)
Q Consensus 257 v~~~~~d~~lGG~~~D~~l~~~l~~ 281 (929)
+....-...+||+++|..|.++|..
T Consensus 185 l~~ai~rl~vgG~~lt~~L~~lL~~ 209 (498)
T 3qb0_A 185 LSKSTRRNFIAGKFINHLIKKALEP 209 (498)
T ss_dssp CGGGCEEESCSHHHHHHHHHHHTTT
T ss_pred ccccceeccccHHHHHHHHHHHHHh
Confidence 1111112369999999999999875
No 31
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.31 E-value=2.5e-12 Score=122.28 Aligned_cols=102 Identities=19% Similarity=0.287 Sum_probs=78.2
Q ss_pred cceeEEEEeeecceEEeeeccccCCCcceeEEEEecCCCccCceEEEEEEeccC---ceEEEEEeccCcCcCChhhhccc
Q psy7891 425 VKKFITKDIVLYPIQVEFERESESGDTKIIKRMLFGPSNTYPQKKILTFNKYVG---DFNFNVSYASEIEHLNPEQIAML 501 (929)
Q Consensus 425 ~k~~~v~d~~~~~i~i~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~f~~~~~---~~~i~i~~g~~~~~~~~~~~~~~ 501 (929)
++++.+.|++||+|||++. +| .+.+||++|+++|++++.+|++..+ .+.|.|||| +..... +|.
T Consensus 14 ~~d~~l~Dv~p~slGIe~~----~g----~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqG-e~~~~~--~n~-- 80 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETM----GG----VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQG-ERKRAA--DNK-- 80 (135)
T ss_dssp -------CCCSSCCCEEET----TT----EECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEEC-CSSSCS--SSE--
T ss_pred eCcEEEEEeecCcEEEEEE----CC----EEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEe-CCcccc--cCc--
Confidence 5788999999999999997 22 3778999999999999999998754 399999999 765332 444
Q ss_pred cceeeeeEEecCCcccccCCCccccCCCceEEEEEeCCCccEEEEEee
Q psy7891 502 GTKQISKFDVSGVSEAFGKHNEENAESKGIKAHFAMDESGILSLVNIE 549 (929)
Q Consensus 502 g~~~i~~~~i~gi~~~~~~~~~~~~~~~~i~v~f~ld~~Gil~v~~~e 549 (929)
.|+++.+.|+++++++. ++|+|+|++|.||+|+|++.+
T Consensus 81 ---~Lg~f~l~gipp~p~G~-------~~IeVtf~iD~nGiL~V~a~d 118 (135)
T 1q5l_A 81 ---SLGQFNLDGINPAPRGM-------PQIEVTFDIDADGILHVSAKD 118 (135)
T ss_dssp ---EEEEEECCCCCSCCSSS-------CCEEEEEEECTTSEEEEEEEE
T ss_pred ---EEEEEEEeCCCCCCCce-------eEEEEEEEECCCCEEEEEEEE
Confidence 45667899999876554 589999999999999999875
No 32
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.27 E-value=1.6e-11 Score=113.36 Aligned_cols=83 Identities=30% Similarity=0.416 Sum_probs=77.2
Q ss_pred HHHHHHHHHhhHHHHHHHHHhhhchhhhccCCChhHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHhchhhHHHH
Q psy7891 672 AKVRKEKALNSLESLLFDAKSKLELEEYSSVAAPNESKTIVDKIDEITNWLEEDGWNAEADVLENKLNEINSLVVPIWER 751 (929)
Q Consensus 672 ~~~~~~eakN~LEs~iy~~r~~L~~~~~~~~~~~~er~~l~~~l~e~~~WL~~d~~~a~~~~~~~kl~eL~~~~~pi~~R 751 (929)
.++++.++||.||+|||++|..|.++.+..++++++++.|...|+++++||++ +.+++.++|+.++++|+.++.||..|
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~-~~~a~~e~i~~k~~eL~~~~~~i~~k 81 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDA-NTLAEKDEFEHKRKELEQVCNPIISG 81 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHc-CCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999999999999999766699999999999999999999999996 57789999999999999999999999
Q ss_pred HHhh
Q psy7891 752 HREH 755 (929)
Q Consensus 752 ~~e~ 755 (929)
++..
T Consensus 82 ~y~~ 85 (113)
T 3lof_A 82 LYQG 85 (113)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 9864
No 33
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.11 E-value=2.6e-09 Score=127.99 Aligned_cols=94 Identities=13% Similarity=0.268 Sum_probs=74.0
Q ss_pred eEEEEecCCCCHHHHHHHHHHH-HHcCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEee
Q psy7891 163 EAVIIVPGYFNQIERQSMLKAG-ELAGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVV 241 (929)
Q Consensus 163 ~~VItVPa~f~~~qR~al~~Aa-~~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~ 241 (929)
.++||.|..++...|+.|.+.+ +..|+..+.++.++.+|++++|. .+-+|||+|++.|.|+-|.
T Consensus 200 pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~-----------~tglVVDiG~~~T~v~PV~---- 264 (593)
T 4fo0_A 200 RCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGL-----------SSTCIVDVGDQKTSVCCVE---- 264 (593)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTC-----------SEEEEEEECSSCEEEEEEE----
T ss_pred cEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCC-----------CceEEEEeCCCceeeeeeE----
Confidence 4999999999999999887766 66799999999999999988763 4568999999999998775
Q ss_pred ccccCCcccCCCcEEEEEEecCCCcchHHHHHHHHHHHHHH
Q psy7891 242 KTKERGFVETHPQVSVLGVGYDRTLGGLEMQIRLRDFLGKK 282 (929)
Q Consensus 242 ~~~~~G~~~~~~~~~v~~~~~d~~lGG~~~D~~l~~~l~~~ 282 (929)
.|..-.+.. -...+||++++..|.++|..+
T Consensus 265 ----dG~~l~~~~-------~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 265 ----DGVSHRNTR-------LCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp ----SSCBCGGGC-------EEESCCHHHHHHHHHHHHHHT
T ss_pred ----CCEEehhhe-------EEecccHHHHHHHHHHHHHhc
Confidence 252111111 113699999999999988764
No 34
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=98.99 E-value=3.4e-10 Score=105.45 Aligned_cols=82 Identities=28% Similarity=0.449 Sum_probs=73.7
Q ss_pred HHHHHHHHHhhHHHHHHHHHhhhchhhhccCCChhHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHhchhhHHHH
Q psy7891 672 AKVRKEKALNSLESLLFDAKSKLELEEYSSVAAPNESKTIVDKIDEITNWLEEDGWNAEADVLENKLNEINSLVVPIWER 751 (929)
Q Consensus 672 ~~~~~~eakN~LEs~iy~~r~~L~~~~~~~~~~~~er~~l~~~l~e~~~WL~~d~~~a~~~~~~~kl~eL~~~~~pi~~R 751 (929)
.++++.++||.||+|||++|..|.++.+...+++++|+.|...|+++.+||++ +.++++++|+.++++|+.++.||..|
T Consensus 12 ~~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~-~~~ad~e~ik~k~~eL~~~~~~i~~k 90 (120)
T 2p32_A 12 SGLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDS-NQTAEKEEFEHQQKDLEGLANPIISK 90 (120)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHc-CCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35678999999999999999999654588899999999999999999999984 46688999999999999999999998
Q ss_pred HHh
Q psy7891 752 HRE 754 (929)
Q Consensus 752 ~~e 754 (929)
++.
T Consensus 91 ~y~ 93 (120)
T 2p32_A 91 LYQ 93 (120)
T ss_dssp HCC
T ss_pred HHH
Confidence 874
No 35
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=98.90 E-value=1e-08 Score=115.31 Aligned_cols=197 Identities=17% Similarity=0.135 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHHc-CC--cEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCccc
Q psy7891 174 QIERQSMLKAGELA-GL--KVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVE 250 (929)
Q Consensus 174 ~~qR~al~~Aa~~A-Gl--~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~ 250 (929)
..+-+.+.+|.+.+ || ++-. -||.||+++....... +..++++||||||||++|+. .|
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE~------eLGvaiIDmGGGTTd~sVf~--------~G--- 427 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPGT------TRPLAILDLGAGSTDASIIN--------PK--- 427 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTTC------CSSEEEEEECSSEEEEEEEC--------TT---
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCC------cCCeEEEEeCCCcceEEEEc--------CC---
Confidence 34567888999999 99 7766 8999999887654322 67899999999999999986 23
Q ss_pred CCCcEEEEEEecCCCcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccC-C---------Cce
Q psy7891 251 THPQVSVLGVGYDRTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSA-N---------NEH 320 (929)
Q Consensus 251 ~~~~~~v~~~~~d~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~-~---------~~~ 320 (929)
.+... .....||.+++..|+.-|.-. | +..||++|. ... . ...
T Consensus 428 ---~lv~a---~~ip~gG~~VT~DIA~~Lgt~---------d-----------~~~AErIK~-YG~A~ve~lf~~~dede 480 (610)
T 2d0o_A 428 ---GDIIA---THLAGAGDMVTMIIARELGLE---------D-----------RYLAEEIKK-YPLAKVESLFHLRHEDG 480 (610)
T ss_dssp ---CCEEE---EEEECSHHHHHHHHHHHHTCC---------C-----------HHHHHHHHH-SCEEEECSSSEEEETTS
T ss_pred ---cEEEE---EEeccchHHHHHHHHHHhCCC---------C-----------HHHHHHhcc-cCceeecccccccCCCC
Confidence 11111 123589999999888766321 0 235888887 321 1 112
Q ss_pred eEEE--eecc----cC-----cceEEEEeHHH--HHHHHHHHHhHHHHH--HHHHHHHcCC-----CCCCccEEEEEcCC
Q psy7891 321 FAQI--EGLI----DE-----IDFKLLVTRAE--FEALNEDLFDRVGYP--VEQALKSSAV-----PMDVISQVILVGAG 380 (929)
Q Consensus 321 ~v~i--e~l~----~~-----~d~~~~itR~e--fe~l~~~l~~~i~~~--i~~~L~~a~~-----~~~~I~~ViLvGG~ 380 (929)
.+.+ +.+. .. .+--..| |.. +|+ ++-+-+++.+. +.++|+..+. ...+|..|+|+||+
T Consensus 481 ~Iev~~~~lgp~~~~Rv~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGs 558 (610)
T 2d0o_A 481 SVQFFSTPLPPAVFARVCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGS 558 (610)
T ss_dssp CEEECSSCCCGGGTTCEEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGG
T ss_pred eEEEecCCCCcceeeeeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCch
Confidence 3444 2221 11 0112355 555 666 55555554443 3334555322 35678999999999
Q ss_pred cCCHHHHHHHHHHhCC-cc--C-----CCCCchHHHHhhHHHHHHh
Q psy7891 381 TRVPKVQEKITKVVGV-EL--S-----KNLNTDEAAALGAVYKAAD 418 (929)
Q Consensus 381 sriP~v~~~l~~~f~~-~i--~-----~~~n~deaVA~GAa~~aa~ 418 (929)
|.++.+.++..+.|+. .+ . ..-+|..|+|.|.+++.+.
T Consensus 559 Sql~GI~ElA~~iL~~y~VRiGrP~~~gv~gP~fAtAvGLlly~~~ 604 (610)
T 2d0o_A 559 SLDFEVPQLVTDALAHYRLVAGRGNIRGSEGPRNAVATGLILSWHK 604 (610)
T ss_dssp GGCSSHHHHHHHHTTTSSCEEEECCGGGTSTTSCHHHHHHHHHHHH
T ss_pred hhcccHHHHHHHHhCcCCeEEecCCccccCCCcHHHHHHHHHHHhh
Confidence 9999999999999985 32 1 2357999999999987653
No 36
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.89 E-value=9.8e-10 Score=123.93 Aligned_cols=194 Identities=15% Similarity=0.105 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHc-CC--cEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCC
Q psy7891 176 ERQSMLKAGELA-GL--KVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETH 252 (929)
Q Consensus 176 qR~al~~Aa~~A-Gl--~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~ 252 (929)
+-+.+.+|.+.+ || ++-. -||.||+++....... +..++++||||||||++++. .|
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE~------elGvaiIDmGgGTTd~sVf~--------~g----- 429 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTTPGC------AAPLAILDLGAGSTDAAIVN--------AE----- 429 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTTC------CSSEEEEEECSSEEEEEEEC--------SS-----
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCC------cCCeEEEEeCCCcceEEEEc--------CC-----
Confidence 345688888888 99 6655 8899999877654322 67899999999999999986 23
Q ss_pred CcEEEEEEecCCCcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccC-C---------CceeE
Q psy7891 253 PQVSVLGVGYDRTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSA-N---------NEHFA 322 (929)
Q Consensus 253 ~~~~v~~~~~d~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~-~---------~~~~v 322 (929)
.+... .....||.+++..|+.-|.-. | +..||+.|. ... . ....+
T Consensus 430 -~lv~a---~~ip~gG~~VT~DIA~~Lg~~---------d-----------~~~AErIK~-YG~A~~e~lf~~~dede~I 484 (607)
T 1nbw_A 430 -GQITA---VHLAGAGNMVSLLIKTELGLE---------D-----------LSLAEAIKK-YPLAKVESLFSIRHENGAV 484 (607)
T ss_dssp -SCEEE---EEEECCHHHHHHHHHHHHTCS---------C-----------HHHHHHHHH-SCEEEECSSSEEEETTSCE
T ss_pred -cEEEE---EEeccchHHHHHHHHHHhCCC---------C-----------HHHHHHhcc-cCceeecccccccCCCCeE
Confidence 11111 123589999999888766321 0 235888887 321 1 11234
Q ss_pred EE--eecc----cC-----cceEEEEeHHH--HHHHHHHHHhHHHHH--HHHHHHHcCC-----CCCCccEEEEEcCCcC
Q psy7891 323 QI--EGLI----DE-----IDFKLLVTRAE--FEALNEDLFDRVGYP--VEQALKSSAV-----PMDVISQVILVGAGTR 382 (929)
Q Consensus 323 ~i--e~l~----~~-----~d~~~~itR~e--fe~l~~~l~~~i~~~--i~~~L~~a~~-----~~~~I~~ViLvGG~sr 382 (929)
.+ +.+. .. .+--..| |.. +|+ ++-+-+++.+. +.++|+.++. ...+|..|+|+||+|.
T Consensus 485 ev~~~~lgp~~~~R~~~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSq 562 (607)
T 1nbw_A 485 EFFREALSPAVFAKVVYIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSL 562 (607)
T ss_dssp EECSSCCCGGGTTCEEEEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGG
T ss_pred EEecCCCCcceeeeeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhh
Confidence 44 2221 11 0112355 555 666 55555554443 4555777654 3457799999999999
Q ss_pred CHHHHHHHHHHhCC-cc-------CCCCCchHHHHhhHHHHHH
Q psy7891 383 VPKVQEKITKVVGV-EL-------SKNLNTDEAAALGAVYKAA 417 (929)
Q Consensus 383 iP~v~~~l~~~f~~-~i-------~~~~n~deaVA~GAa~~aa 417 (929)
++.+.++..+.|+. .+ ...-+|..|+|.|.+++.+
T Consensus 563 l~gI~elA~~iL~~~~VRiGrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 563 DFEIPQLITEALSHYGVVAGQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp SSSHHHHHHHHHHTTTCEEEECCGGGTSCSCCHHHHHHHHHHH
T ss_pred cccHHHHHHHHhCcCCeEEecCCccccCCchHHHHHHHHHhhh
Confidence 99999999999975 32 1245799999999997654
No 37
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=98.89 E-value=8.3e-10 Score=101.87 Aligned_cols=79 Identities=25% Similarity=0.435 Sum_probs=69.7
Q ss_pred HHHHHhhHHHHHHHHHhhhchhhhccCCChhHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHhchhhHHHHHHhh
Q psy7891 676 KEKALNSLESLLFDAKSKLELEEYSSVAAPNESKTIVDKIDEITNWLEEDGWNAEADVLENKLNEINSLVVPIWERHREH 755 (929)
Q Consensus 676 ~~eakN~LEs~iy~~r~~L~~~~~~~~~~~~er~~l~~~l~e~~~WL~~d~~~a~~~~~~~kl~eL~~~~~pi~~R~~e~ 755 (929)
+.++||.||+|||++|..|.++++...+++++|+.|...|.++.+||++ +.+++.++|+.++++|+.++.||..|+++.
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~-~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~ 80 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDK-NQTAEKEEFEHQQKELEKVCNPIITKLYQS 80 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHc-CCccCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5789999999999999999655788999999999999999999999973 445678999999999999999999998753
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.56 E-value=2.5e-06 Score=91.25 Aligned_cols=48 Identities=23% Similarity=0.273 Sum_probs=43.6
Q ss_pred cEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHHHhh
Q psy7891 372 SQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYKAADL 419 (929)
Q Consensus 372 ~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~aa~~ 419 (929)
+.|+++||.++.|.+++.+.+.++.++..+.+++.+.|+|||+.|+..
T Consensus 210 ~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 210 KDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp SSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred CeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 679999999999999999999999888787788889999999999754
No 39
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=98.25 E-value=2.1e-06 Score=100.20 Aligned_cols=202 Identities=10% Similarity=0.059 Sum_probs=111.2
Q ss_pred HHHHHcCC----cEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEE
Q psy7891 182 KAGELAGL----KVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSV 257 (929)
Q Consensus 182 ~Aa~~AGl----~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v 257 (929)
++|+..|| .|+.-..+..||+++.+.... ..+++=+|.+++-..+..- .. ....|. .+-.
T Consensus 220 ~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~---------g~~~~s~GTs~~~~~~~~~-~~-~~~~~~-----~~~~ 283 (504)
T 3ll3_A 220 EYVKKLGIDSDTKIILGASDGYLSTIGVNAIDS---------DHCALNVGTSGAIRTIVDQ-PK-IDPSAS-----YFCY 283 (504)
T ss_dssp HHHHHHTCCTTCEEEEEEEHHHHHHHTTTCCST---------TEEEEEESSSEEEEEEESS-CC-CCTTCC-----SEEE
T ss_pred HHHHhcCCCcCCCEEEEccHHHHHHHhCCCCCC---------CcEEEEechhhhheeeCCC-cc-cCCCCc-----eEEE
Confidence 45555554 588888999999988875431 2345556776654433220 00 001110 1100
Q ss_pred -E-----EEecCCCcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccCCCceeEEEeecccC-
Q psy7891 258 -L-----GVGYDRTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSANNEHFAQIEGLIDE- 330 (929)
Q Consensus 258 -~-----~~~~d~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~v~ie~l~~~- 330 (929)
. ...+....||..+ +|+.+.|... .. . ...+...++++ .......+.++.+...
T Consensus 284 ~~~~~~~~~~g~~~~~G~~~-----~W~~~~~~~~------~~-~---~~~~~~~a~~~----~~g~~gl~~~P~~~Ger 344 (504)
T 3ll3_A 284 PADKTHYLLGGPVNNGGIVF-----NWARQTLFDA------DE-T---PQDFLDVAQTA----PAGSRNLIFLPYLGGER 344 (504)
T ss_dssp EEETTEEEEEEEESCSHHHH-----HHHHHHHTCT------TC-C---HHHHHHHHHTS----CTTGGGCEEECCTTCBC
T ss_pred EeCCCeEEEEeehhhHHHHH-----HHHHHHhccc------hh-H---HHHHHHHHhcC----CCCCCCeEEecCccCCC
Confidence 0 0112234677644 5777766431 00 1 12222222222 1223345666655422
Q ss_pred -----cceE-------EEEeHHHHHHHHHH-HHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCc
Q psy7891 331 -----IDFK-------LLVTRAEFEALNED-LFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVE 397 (929)
Q Consensus 331 -----~d~~-------~~itR~efe~l~~~-l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~ 397 (929)
.+.+ ..-+|.+|-+.+-+ +.-.+...+ +.|+..+. .++.|.++||++|.+.+.+++.+.||.+
T Consensus 345 ~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~~-~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~p 420 (504)
T 3ll3_A 345 APIWDANARGSFVGLTRMHQKPEMARAVIEGIIFNLYDAA-SNLIKNTK---KPVAINATGGFLKSDFVRQLCANIFNVP 420 (504)
T ss_dssp TTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHH-HHHHTTSC---CCSEEEEESGGGCSHHHHHHHHHHHTSC
T ss_pred CCCCCCccCeEEECCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CCCEEEEeCchhcCHHHHHHHHHhhCCe
Confidence 1222 12357766544333 333333333 34554443 5789999999999999999999999987
Q ss_pred cCCCCCchHHHHhhHHHHHHhhcCCc
Q psy7891 398 LSKNLNTDEAAALGAVYKAADLSTGF 423 (929)
Q Consensus 398 i~~~~n~deaVA~GAa~~aa~~s~~f 423 (929)
+... ...|+.|+|||+.|+.-.+.+
T Consensus 421 V~~~-~~~e~~alGaA~lA~~a~G~~ 445 (504)
T 3ll3_A 421 IVTM-KEQQSGTLAAMFLARQALGLN 445 (504)
T ss_dssp EEEE-SCSCHHHHHHHHHHHHHTTSC
T ss_pred EEec-CCCCchhHHHHHHHHHHcCcc
Confidence 7553 356799999999999766654
No 40
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=98.11 E-value=5.9e-06 Score=97.05 Aligned_cols=84 Identities=14% Similarity=0.132 Sum_probs=59.8
Q ss_pred EeHHHHHHHHH-HHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHH
Q psy7891 337 VTRAEFEALNE-DLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYK 415 (929)
Q Consensus 337 itR~efe~l~~-~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~ 415 (929)
-+|.++-+.+- .+.-.+...++..-+.+|. .++.|.++||+++.+.+.+++.++||.++.+.- ..|+.|+|||+.
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~~-~~E~~alGAA~l 446 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERPE-VREVTALGAAYL 446 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEES-CCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHHCCEEEeCC-CCchHHHHHHHH
Confidence 35666654333 3333344444433334565 567899999999999999999999998775543 457899999999
Q ss_pred HHhhcCCcc
Q psy7891 416 AADLSTGFK 424 (929)
Q Consensus 416 aa~~s~~f~ 424 (929)
|+.-.+.|+
T Consensus 447 A~~a~G~~~ 455 (526)
T 3ezw_A 447 AGLAVGFWQ 455 (526)
T ss_dssp HHHHTTSSS
T ss_pred HHHHhCCCC
Confidence 998776543
No 41
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.70 E-value=0.0014 Score=69.76 Aligned_cols=75 Identities=13% Similarity=0.083 Sum_probs=53.8
Q ss_pred EeHHHHHH-HHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcC-CcCCHHHHHHHHHHh---CCccCCCCCchHHHHhh
Q psy7891 337 VTRAEFEA-LNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGA-GTRVPKVQEKITKVV---GVELSKNLNTDEAAALG 411 (929)
Q Consensus 337 itR~efe~-l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG-~sriP~v~~~l~~~f---~~~i~~~~n~deaVA~G 411 (929)
++++++-. ++.-+.+++..+...+.+..+ +..|+++|| .+..|.+++.|.+++ +.++..+.++..+.|+|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 45666543 344444455444444444443 446999999 899999999999985 46788888999999999
Q ss_pred HHHHH
Q psy7891 412 AVYKA 416 (929)
Q Consensus 412 Aa~~a 416 (929)
||+.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99864
No 42
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.64 E-value=0.00017 Score=83.98 Aligned_cols=116 Identities=16% Similarity=0.233 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHhhcccc-----cceEEEEecCCCCHHHHHHHHHHH-HHcCCcEEEEechhHHHHHHhcccccccC
Q psy7891 140 ELVAMLLHKAREYASVSAGQV-----INEAVIIVPGYFNQIERQSMLKAG-ELAGLKVLQLMNDYTAVALNYGIFKRKDF 213 (929)
Q Consensus 140 el~a~~L~~lk~~a~~~~~~~-----v~~~VItVPa~f~~~qR~al~~Aa-~~AGl~~~~li~EptAAAl~y~~~~~~~~ 213 (929)
+.+..++.|+... ..++.. -..++||+|+.++...|+.|.+.+ +..|+.-+.++.++.||++++|.
T Consensus 197 D~mE~Iw~y~f~~--~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl------ 268 (655)
T 4am6_A 197 SDVTKLLEHALNS--ETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI------ 268 (655)
T ss_dssp HHHHHHHHHHHBS--SSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC------
T ss_pred HHHHHHHHHHhcc--ccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC------
Confidence 4445566665421 133322 246999999999999999999988 56899999999999999988774
Q ss_pred CCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEEEEecCCCcchHHHHHHHHHHHHHH
Q psy7891 214 NETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVGYDRTLGGLEMQIRLRDFLGKK 282 (929)
Q Consensus 214 ~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~~d~~lGG~~~D~~l~~~l~~~ 282 (929)
...-||+|+|+|+|+++.|. .|. -+........+||+++|..|.++|..+
T Consensus 269 ----~ttGLVVDiG~g~T~VvPV~--------eG~-------vl~~ai~rL~iGG~dLT~yL~kLL~~r 318 (655)
T 4am6_A 269 ----STSTCVVNIGAAETRIACVD--------EGT-------VLEHSAITLDYGGDDITRLFALFLLQS 318 (655)
T ss_dssp ----SSCEEEEEECSSCEEEEEEE--------TTE-------ECGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred ----CCceEEEcCCCceEEEEEEe--------CCE-------EEhhheeeecchHHHHHHHHHHHHHHc
Confidence 13569999999999999885 241 111111124699999999999998765
No 43
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=97.15 E-value=0.0029 Score=73.80 Aligned_cols=209 Identities=15% Similarity=0.078 Sum_probs=111.7
Q ss_pred HHHHHcCC----cEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcc---c--CC
Q psy7891 182 KAGELAGL----KVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFV---E--TH 252 (929)
Q Consensus 182 ~Aa~~AGl----~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~---~--~~ 252 (929)
++|+..|| .|+.-..+..||+++.+.... + .+++-+|.+++-..+...........|.. . -.
T Consensus 224 ~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~-------g--~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (511)
T 3hz6_A 224 LAARQTGFVSGTPVLCGLGDAGAATLGVGVLDD-------E--DAYLHLGTTGWLARLTQTDPVGDMPVGTIFRLAGIIA 294 (511)
T ss_dssp HHHHHHCCCTTCEEECCEEHHHHHHHHTTCCST-------T--CEEEEESSSEEEEEEEECCCCCSCCSSCCEEECSSST
T ss_pred HHHHhhCCCCCCeEEEECchHHHHHHhCCCCCC-------C--cEEEEecchhhheeecCCeecccCCCCceEEEEEecC
Confidence 45555554 577778888899988876432 1 23445676665544433011110011210 0 01
Q ss_pred CcEEEEEEecCCCcchHHHHHHHHHHHHHHhhhhcccCCCccCCHHHHHHHHHHHHHhhhhccCCCceeEEEeecccC--
Q psy7891 253 PQVSVLGVGYDRTLGGLEMQIRLRDFLGKKFNEMKKTTKDVFENPRAVAKLFKEAGRLKNVLSANNEHFAQIEGLIDE-- 330 (929)
Q Consensus 253 ~~~~v~~~~~d~~lGG~~~D~~l~~~l~~~f~~~~~~~~d~~~~~~~~~kL~~~aek~K~~LS~~~~~~v~ie~l~~~-- 330 (929)
+.+-+. +....||. ..+|+.+.|.. .. . . .+..|.+.++++..-. ......+.++.+.+.
T Consensus 295 ~~~~~~---g~~~~~G~-----~~~W~~~~~~~--~~--~--~---~~~~l~~~a~~~~~g~-~~~~gl~~~P~~~Ger~ 356 (511)
T 3hz6_A 295 GKTLQV---APVLNAGN-----ILQWALTLVGH--RP--G--E---DCAEYFHMAAAEVQGV-TVPDGLLFVPYLHAERC 356 (511)
T ss_dssp TEEEEE---EEESSSHH-----HHHHHGGGGTC--CT--T--S---CSHHHHHHHHHHHTTC-CCCTTCEEEEESSCBCS
T ss_pred CceEEE---eehhhHHH-----HHHHHHHHhcc--cc--c--c---cHHHHHHHHHhCCCCC-CCCCCEEEeCCCCCCCC
Confidence 111111 12345664 45677776641 00 0 0 1233444444433210 002234566655322
Q ss_pred ----cceEE-------EEeHHHHHHHHH-HHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCcc
Q psy7891 331 ----IDFKL-------LVTRAEFEALNE-DLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVEL 398 (929)
Q Consensus 331 ----~d~~~-------~itR~efe~l~~-~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i 398 (929)
.+.+- .-+|.+|-+.+- .+.-.+...+ +.|+. + . ++.|.++||++|.+.+.+++.+.||.++
T Consensus 357 P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~~~~~-~~l~~-g---~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV 430 (511)
T 3hz6_A 357 PVELPAPRGALLGVTGATTRAQILLAVLEGAALSLRWCA-ELLGM-E---K-VGLLKVVGGGARSEAWLRMIADNLNVSL 430 (511)
T ss_dssp SSCBSSCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH-HHHTG-G---G-CCEEEEESGGGGCHHHHHHHHHHHTCEE
T ss_pred CCCCCccceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHhc-C---C-CCEEEEeCchhcCHHHHHHHHHHHCCee
Confidence 22222 235766644332 2333333333 33443 3 2 7899999999999999999999999887
Q ss_pred CCCCCchHHHHhhHHHHHHhhcCCc
Q psy7891 399 SKNLNTDEAAALGAVYKAADLSTGF 423 (929)
Q Consensus 399 ~~~~n~deaVA~GAa~~aa~~s~~f 423 (929)
.....+.|+.|+|||+.|+.-.+.+
T Consensus 431 ~~~~~~~e~~alGaA~lA~~a~G~~ 455 (511)
T 3hz6_A 431 LVKPDAHLHPLRGLAALAAVELEWS 455 (511)
T ss_dssp EECCCGGGHHHHHHHHHHHHHTTSC
T ss_pred EEecCCCCchHHHHHHHHHHHhCCc
Confidence 2334588999999999999777654
No 44
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=96.87 E-value=0.0099 Score=69.12 Aligned_cols=82 Identities=16% Similarity=0.230 Sum_probs=58.8
Q ss_pred EeHHHHHHHH-HHHHhHHHHHHHHHHHH-cCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHH
Q psy7891 337 VTRAEFEALN-EDLFDRVGYPVEQALKS-SAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVY 414 (929)
Q Consensus 337 itR~efe~l~-~~l~~~i~~~i~~~L~~-a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~ 414 (929)
-+|.+|-+.+ +.+.-.+...++ .|+. .+. .++.|.++||++|.+.+.+++.+.||.++.. ..+.|+.|+|||+
T Consensus 372 ~~~~~l~RAvlEgia~~~r~~~~-~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~-~~~~e~~alGaA~ 446 (506)
T 3h3n_X 372 TTKEDFVRATLQAVAYQSKDVID-TMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADILDIDVQR-AANLETTALGAAY 446 (506)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH-HHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHHTSEEEE-CSSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH-HHHHhcCC---CCCEEEEecccccCHHHHHHHHHHhCCeEEe-cCCCcchhHHHHH
Confidence 3677665433 333334444443 3333 454 4678999999999999999999999987754 3466799999999
Q ss_pred HHHhhcCCc
Q psy7891 415 KAADLSTGF 423 (929)
Q Consensus 415 ~aa~~s~~f 423 (929)
.|+.-.+.|
T Consensus 447 lA~~a~G~~ 455 (506)
T 3h3n_X 447 LAGLAVGFW 455 (506)
T ss_dssp HHHHHTTSS
T ss_pred HHHHHhCcc
Confidence 999777654
No 45
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=96.82 E-value=0.0039 Score=72.84 Aligned_cols=83 Identities=14% Similarity=0.115 Sum_probs=55.5
Q ss_pred eHHHHHHHH-HHHHhHHHHHHHHHHHHcC-CCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHH
Q psy7891 338 TRAEFEALN-EDLFDRVGYPVEQALKSSA-VPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYK 415 (929)
Q Consensus 338 tR~efe~l~-~~l~~~i~~~i~~~L~~a~-~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~ 415 (929)
+|.++-+.+ +.+.-.+...++ .|+..+ ... .++.|.++||++|.|.+.+++.+.||.++... ...|+.|+|||+.
T Consensus 393 ~~~~l~RAvlEgia~~~r~~l~-~l~~~~~~~g-~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~l 469 (520)
T 4e1j_A 393 GPAEFARAALEAVCYQTRDLLE-AMHKDWRRNG-NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRP-VILETTALGVAWL 469 (520)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHCC------CCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHhhccCC-CcceEEEeCccccCHHHHHHHHHHhCCeEEec-CCCccHHHHHHHH
Confidence 576665433 333333333333 333331 011 56789999999999999999999999877653 4567999999999
Q ss_pred HHhhcCCc
Q psy7891 416 AADLSTGF 423 (929)
Q Consensus 416 aa~~s~~f 423 (929)
|+.-.+.|
T Consensus 470 A~~a~G~~ 477 (520)
T 4e1j_A 470 AGSRAGVW 477 (520)
T ss_dssp HHHHHTSS
T ss_pred HHHHcCCc
Confidence 99877654
No 46
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=96.38 E-value=0.039 Score=60.34 Aligned_cols=47 Identities=15% Similarity=0.081 Sum_probs=39.8
Q ss_pred ccEEEEEcC-CcCCHHHHHHHHHHhC------CccCCCCCchHHHHhhHHHHHH
Q psy7891 371 ISQVILVGA-GTRVPKVQEKITKVVG------VELSKNLNTDEAAALGAVYKAA 417 (929)
Q Consensus 371 I~~ViLvGG-~sriP~v~~~l~~~f~------~~i~~~~n~deaVA~GAa~~aa 417 (929)
++.|+++|| .++.|.+++.|.+.++ .++....++.-+-|+|||+.+.
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~~ 359 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLELF 359 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHHT
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHhc
Confidence 346999999 8999999999999973 4666777899999999999753
No 47
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.14 E-value=0.0081 Score=70.70 Aligned_cols=85 Identities=15% Similarity=0.216 Sum_probs=60.7
Q ss_pred EEEeHHHHHHHHHHHHhHHHHHHHH---HHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhh
Q psy7891 335 LLVTRAEFEALNEDLFDRVGYPVEQ---ALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALG 411 (929)
Q Consensus 335 ~~itR~efe~l~~~l~~~i~~~i~~---~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~G 411 (929)
..-+|.++-.++.-+++-+.--++. +|+..+. .++.|.++||++|.+.+.+++.+.||.++... ...|+.|+|
T Consensus 407 ~~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~---~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~-~~~e~~alG 482 (554)
T 3l0q_A 407 LSTTPEDMALRYLATIQALALGTRHIIETMNQNGY---NIDTMMASGGGTKNPIFVQEHANATGCAMLLP-EESEAMLLG 482 (554)
T ss_dssp SCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC---CCCEEEEESGGGGCHHHHHHHHHHHCCEEEEE-SCSCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEeCccccCHHHHHHHHHhhCCeEEec-CCCcchHHH
Confidence 3447888844333444433333333 4444444 57899999999999999999999999877554 346799999
Q ss_pred HHHHHHhhcCCc
Q psy7891 412 AVYKAADLSTGF 423 (929)
Q Consensus 412 Aa~~aa~~s~~f 423 (929)
||+.|+.-.+.|
T Consensus 483 AA~lA~~a~G~~ 494 (554)
T 3l0q_A 483 SAMMGTVAAGVF 494 (554)
T ss_dssp HHHHHHHHTTSS
T ss_pred HHHHHHHHcCCc
Confidence 999999877654
No 48
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=96.12 E-value=0.42 Score=51.98 Aligned_cols=65 Identities=17% Similarity=0.187 Sum_probs=44.6
Q ss_pred HHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHh---CCccCCCC---CchHHHHhhHHHHHHh
Q psy7891 349 LFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVV---GVELSKNL---NTDEAAALGAVYKAAD 418 (929)
Q Consensus 349 l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f---~~~i~~~~---n~deaVA~GAa~~aa~ 418 (929)
+.+.+...+.++++..+ ++.|+|+||...-..+++.|.+.+ |.++..+. -.|.++++|+|.+...
T Consensus 228 l~~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~ 298 (330)
T 2ivn_A 228 AFAALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMY 298 (330)
T ss_dssp HHHHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHH
Confidence 33444445555555433 568999999999999999999877 43443333 4567889998876543
No 49
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.08 E-value=0.97 Score=48.14 Aligned_cols=48 Identities=21% Similarity=0.167 Sum_probs=36.1
Q ss_pred CccEEEEEcCCcCCHHHHHHHHHHhC-CccCCCCCchHHHHhhHHHHHHh
Q psy7891 370 VISQVILVGAGTRVPKVQEKITKVVG-VELSKNLNTDEAAALGAVYKAAD 418 (929)
Q Consensus 370 ~I~~ViLvGG~sriP~v~~~l~~~f~-~~i~~~~n~deaVA~GAa~~aa~ 418 (929)
+.+.|+|.||.+..+.+.+.|++.+. .++.... .+.+.++||++.+..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 44679999998877888888888776 3454444 567899999988754
No 50
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=95.91 E-value=0.72 Score=49.80 Aligned_cols=45 Identities=22% Similarity=0.175 Sum_probs=30.8
Q ss_pred cCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEE
Q psy7891 187 AGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVS 237 (929)
Q Consensus 187 AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 237 (929)
.|++ +.+.|+..|+|++..+..... . ..+++++-+|.| .-.+++.
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~~---~-~~~~~~l~~GtG-iG~gii~ 140 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAGQ---G-HDDVICITLGTG-LGGGIII 140 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTT---T-CSSEEEEEESSS-EEEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCCC---C-CCCEEEEEeCcc-eEEEEEE
Confidence 4787 589999999998754432211 1 467888888988 5555553
No 51
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.90 E-value=0.015 Score=67.72 Aligned_cols=80 Identities=24% Similarity=0.410 Sum_probs=57.7
Q ss_pred eHHHHHHHH-HHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHH
Q psy7891 338 TRAEFEALN-EDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYKA 416 (929)
Q Consensus 338 tR~efe~l~-~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~a 416 (929)
+|.++-..+ +.+.-.+...+ +.|+..+. .++.|.++||++|.+.+.+++.+.||.++... ...|+.|+|||+.|
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l-~~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA 469 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCL-ELIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGMDVTRP-ATDEYVAIGAARQA 469 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH-HHHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-CCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCCceEec-CCcccHHHHHHHHH
Confidence 677665433 33333444333 34555555 46789999999999999999999999877553 45678999999999
Q ss_pred HhhcCC
Q psy7891 417 ADLSTG 422 (929)
Q Consensus 417 a~~s~~ 422 (929)
+.-.+.
T Consensus 470 ~~a~G~ 475 (515)
T 3i8b_A 470 AWVLSG 475 (515)
T ss_dssp HHHHHC
T ss_pred HHHcCC
Confidence 876654
No 52
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=95.82 E-value=1.1 Score=48.67 Aligned_cols=47 Identities=21% Similarity=0.193 Sum_probs=33.1
Q ss_pred CccEEEEEcCCcCCHHHHHHHHHHhCC---------ccCCCCCchHHHHhhHHHHH
Q psy7891 370 VISQVILVGAGTRVPKVQEKITKVVGV---------ELSKNLNTDEAAALGAVYKA 416 (929)
Q Consensus 370 ~I~~ViLvGG~sriP~v~~~l~~~f~~---------~i~~~~n~deaVA~GAa~~a 416 (929)
+.+.|+|-||.+..+.+.+.|++.+.. ++....-.+.+.++|||+.+
T Consensus 269 ~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 269 DPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 346889999988888777777776642 12233346789999998764
No 53
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.79 E-value=0.017 Score=66.99 Aligned_cols=82 Identities=17% Similarity=0.205 Sum_probs=58.7
Q ss_pred eHHHHHHHH-HHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHH
Q psy7891 338 TRAEFEALN-EDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYKA 416 (929)
Q Consensus 338 tR~efe~l~-~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~a 416 (929)
+|.+|-+.+ +.+.-.+...++..-+..+. .++.|.++||++|.+.+.+++.+.||.++... ...|+.|+|||+.|
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~la 449 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIVNTSVERP-EIQETTALGAAFLA 449 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHhCCceEec-CCCcchHHHHHHHH
Confidence 576665433 33333444444433233555 46789999999999999999999999877543 46679999999999
Q ss_pred HhhcCCc
Q psy7891 417 ADLSTGF 423 (929)
Q Consensus 417 a~~s~~f 423 (929)
+.-.+.|
T Consensus 450 ~~a~G~~ 456 (501)
T 3g25_A 450 GLAVGFW 456 (501)
T ss_dssp HHHTTSS
T ss_pred HHHhCcc
Confidence 9777654
No 54
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.78 E-value=0.015 Score=67.56 Aligned_cols=81 Identities=17% Similarity=0.028 Sum_probs=58.1
Q ss_pred eHHHHHHHHH-HHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHH
Q psy7891 338 TRAEFEALNE-DLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYKA 416 (929)
Q Consensus 338 tR~efe~l~~-~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~a 416 (929)
+|.+|-+.+- .+.-.+...+ +.|+..+. .++.|.++||++|.+.+.+++.+.||.++..... .|+.|+|||+.|
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~-~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~alGaA~lA 445 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHV-AVLDDIGH---APQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAVGAAWVA 445 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-HHHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHHHHHHHH
Confidence 6777654433 3333333333 34455554 4678999999999999999999999987765543 568899999999
Q ss_pred HhhcCCc
Q psy7891 417 ADLSTGF 423 (929)
Q Consensus 417 a~~s~~f 423 (929)
+.-.+.|
T Consensus 446 ~~a~G~~ 452 (508)
T 3ifr_A 446 AIGGGDD 452 (508)
T ss_dssp HHHTCSS
T ss_pred HHHhCCC
Confidence 8776644
No 55
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=95.77 E-value=0.016 Score=67.80 Aligned_cols=80 Identities=10% Similarity=0.098 Sum_probs=56.7
Q ss_pred eHHHHHHHHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHHH
Q psy7891 338 TRAEFEALNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYKAA 417 (929)
Q Consensus 338 tR~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~aa 417 (929)
+|.+|- .-+++-+.--++.+++..+.....++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.|+
T Consensus 405 ~~~~l~---RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~ 480 (538)
T 4bc3_A 405 PGDVEV---RALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAF 480 (538)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHHHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHHHHHHHH
Confidence 455543 3344444444444444444334467889999999999999999999999877554 457899999999998
Q ss_pred hhcC
Q psy7891 418 DLST 421 (929)
Q Consensus 418 ~~s~ 421 (929)
.-.+
T Consensus 481 ~a~G 484 (538)
T 4bc3_A 481 HGLA 484 (538)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 6554
No 56
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=95.68 E-value=0.42 Score=51.23 Aligned_cols=48 Identities=23% Similarity=0.140 Sum_probs=31.3
Q ss_pred CccEEEEEcCCc-CC-HHHHHHHHHHhC--------CccCCCCCchHHHHhhHHHHHH
Q psy7891 370 VISQVILVGAGT-RV-PKVQEKITKVVG--------VELSKNLNTDEAAALGAVYKAA 417 (929)
Q Consensus 370 ~I~~ViLvGG~s-ri-P~v~~~l~~~f~--------~~i~~~~n~deaVA~GAa~~aa 417 (929)
+.+.|+|-||.+ +. +.+.+.|++.+. ..+....-.+.+.++|||+.+.
T Consensus 237 ~p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 237 DPGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp CCSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 346788888877 54 555555555443 1233444567899999998875
No 57
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.67 E-value=0.018 Score=66.76 Aligned_cols=53 Identities=19% Similarity=0.223 Sum_probs=44.8
Q ss_pred CccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHHHhhcCCc
Q psy7891 370 VISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYKAADLSTGF 423 (929)
Q Consensus 370 ~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~aa~~s~~f 423 (929)
.++.|.++||+++.+.+.+++.+.||.++.... ..|+.|+|||+.|+.-.+.|
T Consensus 393 ~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~-~~e~~alGaA~lA~~~~g~~ 445 (497)
T 2zf5_O 393 QIKELRVDGGATANDFLMQFQADILNRKVIRPV-VKETTALGAAYLAGLAVDYW 445 (497)
T ss_dssp CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEES-CSCHHHHHHHHHHHHHTTSS
T ss_pred CcceEEEeCccccCHHHHHHHHhhcCCeEEEcC-CCcchHHHHHHHHHHHhCcc
Confidence 578899999999999999999999998776544 45699999999998766543
No 58
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.63 E-value=0.018 Score=68.00 Aligned_cols=79 Identities=15% Similarity=0.095 Sum_probs=57.4
Q ss_pred eHHHHHHHHHH-HHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCc-CCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHH
Q psy7891 338 TRAEFEALNED-LFDRVGYPVEQALKSSAVPMDVISQVILVGAGT-RVPKVQEKITKVVGVELSKNLNTDEAAALGAVYK 415 (929)
Q Consensus 338 tR~efe~l~~~-l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~s-riP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~ 415 (929)
+|.+|-..+-+ +.-.+...+ +.|+..+. .++.|.++||++ |.+.+.+++.+.||.++... ...|+.|+|||+.
T Consensus 410 t~~~l~RAvlEgia~~~r~~~-~~l~~~g~---~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 484 (572)
T 3jvp_A 410 KPEEIYRALLEATAFGTRAIV-DAFHGRGV---EVHELYACGGLPQKNHLLMQIFADVTNREIKVA-ASKQTPALGAAMF 484 (572)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-HHHHTTTC---CEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEB-CCSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CcCEEEEEcCchhhCHHHHHHHHHHHCCeeEec-CCCccHHHHHHHH
Confidence 67776544333 333333333 34555444 578999999999 99999999999999877544 3578999999999
Q ss_pred HHhhcC
Q psy7891 416 AADLST 421 (929)
Q Consensus 416 aa~~s~ 421 (929)
|+.-.+
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 997665
No 59
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.54 E-value=0.015 Score=67.32 Aligned_cols=82 Identities=18% Similarity=0.195 Sum_probs=57.3
Q ss_pred eHHHHHHH-HHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHH
Q psy7891 338 TRAEFEAL-NEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYKA 416 (929)
Q Consensus 338 tR~efe~l-~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~a 416 (929)
+|.++-+. ++.+.-.+...++ .|+..+. .++.|.++||+++.+.+.+++.+.||.++......+.+.|+|||+.|
T Consensus 357 ~~~~~~rAvlEgia~~~~~~~~-~l~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA 432 (484)
T 2itm_A 357 GPNELARAVLEGVGYALADGMD-VVHACGI---KPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLA 432 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHTTTC---CCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHH
Confidence 56665443 3333333333333 3444443 46789999999999999999999999888766555545899999999
Q ss_pred HhhcCCc
Q psy7891 417 ADLSTGF 423 (929)
Q Consensus 417 a~~s~~f 423 (929)
+.-.+.+
T Consensus 433 ~~~~g~~ 439 (484)
T 2itm_A 433 QIAANPE 439 (484)
T ss_dssp HHHHCTT
T ss_pred HHHcCCc
Confidence 8766543
No 60
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.53 E-value=0.022 Score=66.27 Aligned_cols=81 Identities=16% Similarity=0.200 Sum_probs=57.7
Q ss_pred eHHHHHHHH-HHHHhHHHHHHHHHHHH-cCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHH
Q psy7891 338 TRAEFEALN-EDLFDRVGYPVEQALKS-SAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYK 415 (929)
Q Consensus 338 tR~efe~l~-~~l~~~i~~~i~~~L~~-a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~ 415 (929)
+|.++-+.+ +.+.-.+...++ .|+. .+. .++.|.++||++|.+.+.+++.+.||.++... .+.|+.|+|||+.
T Consensus 371 ~~~~l~RAvlEgia~~~r~~~~-~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 445 (510)
T 2p3r_A 371 NANHIIRATLESIAYQTRDVLE-AMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYL 445 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHhCCceEec-CCCCcHHHHHHHH
Confidence 566665433 333334444443 3333 354 46789999999999999999999999877543 3567999999999
Q ss_pred HHhhcCCc
Q psy7891 416 AADLSTGF 423 (929)
Q Consensus 416 aa~~s~~f 423 (929)
|+.-.+.|
T Consensus 446 A~~a~G~~ 453 (510)
T 2p3r_A 446 AGLAVGFW 453 (510)
T ss_dssp HHHHHTSS
T ss_pred HHHHhCcc
Confidence 99776654
No 61
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=95.46 E-value=0.64 Score=49.65 Aligned_cols=49 Identities=18% Similarity=0.274 Sum_probs=36.1
Q ss_pred CccEEEEEcCCcCCHHHHHHHHHHhCC------ccCCCCCchHHHHhhHHHHHHh
Q psy7891 370 VISQVILVGAGTRVPKVQEKITKVVGV------ELSKNLNTDEAAALGAVYKAAD 418 (929)
Q Consensus 370 ~I~~ViLvGG~sriP~v~~~l~~~f~~------~i~~~~n~deaVA~GAa~~aa~ 418 (929)
+.+.|+|-||.++.+.+.+.|++.+.. .+......+.+.++|||+.+..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 456899999999888777888877752 2333445678999999988754
No 62
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=95.34 E-value=0.18 Score=54.61 Aligned_cols=48 Identities=17% Similarity=0.165 Sum_probs=32.9
Q ss_pred CccEEEEEcCCcCC-HHHHHHHHHHhC----------CccCCCCCchHHHHhhHHHHHH
Q psy7891 370 VISQVILVGAGTRV-PKVQEKITKVVG----------VELSKNLNTDEAAALGAVYKAA 417 (929)
Q Consensus 370 ~I~~ViLvGG~sri-P~v~~~l~~~f~----------~~i~~~~n~deaVA~GAa~~aa 417 (929)
+.+.|+|-||.++. +.+.+.|++.+. ..+......+.+.++|||+++.
T Consensus 260 dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 260 DLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 34689999998886 555555554442 1344555677899999998764
No 63
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=95.25 E-value=4.2 Score=44.03 Aligned_cols=67 Identities=4% Similarity=-0.072 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHhh-c-cc-ccceEEEEecCCCCHHHHHHHHHHHHH-cC---CcEEEEechhHHHHHHh
Q psy7891 138 VEELVAMLLHKAREYASVS-A-GQ-VINEAVIIVPGYFNQIERQSMLKAGEL-AG---LKVLQLMNDYTAVALNY 205 (929)
Q Consensus 138 ~eel~a~~L~~lk~~a~~~-~-~~-~v~~~VItVPa~f~~~qR~al~~Aa~~-AG---l~~~~li~EptAAAl~y 205 (929)
+++++..+...+.+..... . .. .+..+.|++|...+......+.+..+. .| ++ +.+.|+..|||+++
T Consensus 45 ~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~p-v~v~NDa~aaa~a~ 118 (347)
T 2ch5_A 45 TDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSES-YLITTDAAGSIATA 118 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSC-EEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCce-EEEECcHHHHHHhh
Confidence 4444444444444444332 1 12 577899999999987665566665543 34 44 58999999999884
No 64
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.15 E-value=0.041 Score=63.84 Aligned_cols=82 Identities=18% Similarity=0.149 Sum_probs=58.6
Q ss_pred eHHHHHHH-HHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHH
Q psy7891 338 TRAEFEAL-NEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYKA 416 (929)
Q Consensus 338 tR~efe~l-~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~a 416 (929)
+|.++-+. ++.+.-.+...++..-+..+. .++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.|
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA 448 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQLGVDVVRP-KVAETTALGAAYAA 448 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHhCCeEEeC-CCCcchHHHHHHHH
Confidence 57766543 344444444444433233454 46789999999999999999999999877544 44679999999999
Q ss_pred HhhcCCc
Q psy7891 417 ADLSTGF 423 (929)
Q Consensus 417 a~~s~~f 423 (929)
+.-.+.|
T Consensus 449 ~~~~G~~ 455 (504)
T 2d4w_A 449 GIAVGFW 455 (504)
T ss_dssp HHHHTSS
T ss_pred HhhcCcc
Confidence 8776543
No 65
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.06 E-value=1.6 Score=47.00 Aligned_cols=49 Identities=16% Similarity=0.177 Sum_probs=33.3
Q ss_pred ccEEEEEcCCcC-CHHHHHHHHHHhCC----------ccCCCCCchHHHHhhHHHHHHhh
Q psy7891 371 ISQVILVGAGTR-VPKVQEKITKVVGV----------ELSKNLNTDEAAALGAVYKAADL 419 (929)
Q Consensus 371 I~~ViLvGG~sr-iP~v~~~l~~~f~~----------~i~~~~n~deaVA~GAa~~aa~~ 419 (929)
.+.|+|.||.++ .+.+.+.|++.+.. ++......+.+.++|||+.+...
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~~ 322 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQF 322 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHHh
Confidence 457888898886 57777777666531 22233356779999999887543
No 66
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=95.02 E-value=0.045 Score=63.48 Aligned_cols=82 Identities=13% Similarity=0.105 Sum_probs=57.5
Q ss_pred eHHHHHH-HHHHHHhHHHHHHHHHHHHcCCCCCCc-cEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHH
Q psy7891 338 TRAEFEA-LNEDLFDRVGYPVEQALKSSAVPMDVI-SQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYK 415 (929)
Q Consensus 338 tR~efe~-l~~~l~~~i~~~i~~~L~~a~~~~~~I-~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~ 415 (929)
+|.++-. +++.+.-.+...++..-+..+. .+ +.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~-~~~e~~alGaA~l 451 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVS-KYKEVTSLGAAVL 451 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHHCCeEEec-CCCcchHHHHHHH
Confidence 5666654 3344444444444433222454 35 679999999999999999999999877544 4556999999999
Q ss_pred HHhhcCCc
Q psy7891 416 AADLSTGF 423 (929)
Q Consensus 416 aa~~s~~f 423 (929)
|+.-.+.|
T Consensus 452 a~~~~G~~ 459 (503)
T 2w40_A 452 AGLEVKIW 459 (503)
T ss_dssp HHHHTTCS
T ss_pred HHHHhCcc
Confidence 98766543
No 67
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=94.86 E-value=0.051 Score=62.94 Aligned_cols=81 Identities=19% Similarity=0.122 Sum_probs=56.6
Q ss_pred eHHHHHH-HHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHH
Q psy7891 338 TRAEFEA-LNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYKA 416 (929)
Q Consensus 338 tR~efe~-l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~a 416 (929)
+|.++-. +++.+.-.+...++..-+..+. .++.|.++||++|.+.+.+++.+.+|.++... ...|+.|+|||+.|
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~-~~~e~~alGaA~la 443 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLLGVPVAVP-EVTETTALGAALMA 443 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHhCCeeEec-CCcccHHHHHHHHH
Confidence 5666543 3344444444444432222343 45789999999999999999999999877544 34569999999999
Q ss_pred HhhcCC
Q psy7891 417 ADLSTG 422 (929)
Q Consensus 417 a~~s~~ 422 (929)
+.-.+.
T Consensus 444 ~~a~G~ 449 (495)
T 2dpn_A 444 GVGAGA 449 (495)
T ss_dssp HHHHTS
T ss_pred HhhcCc
Confidence 876653
No 68
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=94.85 E-value=0.051 Score=62.80 Aligned_cols=80 Identities=18% Similarity=0.145 Sum_probs=54.6
Q ss_pred EEEeHHHHHHHH-HHHHhHHHHHHHHHHHH-cCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhH
Q psy7891 335 LLVTRAEFEALN-EDLFDRVGYPVEQALKS-SAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGA 412 (929)
Q Consensus 335 ~~itR~efe~l~-~~l~~~i~~~i~~~L~~-a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GA 412 (929)
..-+|.+|-+.+ +.+.-.+...++ .|+. .+. .++.|.++||++|.+.+.+++.+.||.++.... .|+.|+||
T Consensus 360 ~~~t~~~l~RAvlEgia~~~r~~~~-~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGa 433 (489)
T 2uyt_A 360 IPESDAELARCIFDSLALLYADVLH-ELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGN 433 (489)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHH-HHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHH
Confidence 345677765433 333334444443 3333 454 467899999999999999999999998776443 58999999
Q ss_pred HHHHHhhc
Q psy7891 413 VYKAADLS 420 (929)
Q Consensus 413 a~~aa~~s 420 (929)
|+.|+.-.
T Consensus 434 a~~A~~a~ 441 (489)
T 2uyt_A 434 IGIQLMTL 441 (489)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 66665433
No 69
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=94.66 E-value=0.12 Score=46.78 Aligned_cols=78 Identities=14% Similarity=0.070 Sum_probs=57.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhccccCcCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceeHHH
Q psy7891 757 ERPEALKSLNNALNVSVTFYNSIKNLSLNTNETEDLNLFSDIELKSLDTLINETKVWKEKSEKEQNQLKKSDPIVLTIRS 836 (929)
Q Consensus 757 ~rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~d 836 (929)
.|-++...|..++..+++.|.. +.+ ...++++++..|...|+++..||+.. .-....+
T Consensus 6 e~ieakN~lEs~iy~~e~~l~e-----~~~-----~~kl~~eek~~i~~~i~e~~~wL~~~------------~~a~~e~ 63 (113)
T 3lof_A 6 ERVSAKNALESYAFNMKSAVED-----EGL-----KGKISEADKKKVLDKCQEVISWLDAN------------TLAEKDE 63 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-----GGG-----BTTBCHHHHHHHHHHHHHHHHHHHHC------------TTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-----hhh-----hccCCHHHHHHHHHHHHHHHHHHHcC------------CcCCHHH
Confidence 3445556666666666654432 111 15799999999999999999999751 1124789
Q ss_pred HHHHHHHHHHHHHHHHhccc
Q psy7891 837 IVEKIRALEREVRYLENKSK 856 (929)
Q Consensus 837 i~~k~~~l~~~~~~i~~k~k 856 (929)
|+.|++.|+..+.+|+.++-
T Consensus 64 i~~k~~eL~~~~~~i~~k~y 83 (113)
T 3lof_A 64 FEHKRKELEQVCNPIISGLY 83 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998873
No 70
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=94.58 E-value=1.5 Score=46.40 Aligned_cols=49 Identities=16% Similarity=0.134 Sum_probs=32.2
Q ss_pred CccEEEEEcCCcCCHHHHHHHHHHhC------------CccCCCCCchHHHHhhHHHHHHh
Q psy7891 370 VISQVILVGAGTRVPKVQEKITKVVG------------VELSKNLNTDEAAALGAVYKAAD 418 (929)
Q Consensus 370 ~I~~ViLvGG~sriP~v~~~l~~~f~------------~~i~~~~n~deaVA~GAa~~aa~ 418 (929)
+.+.|+|.||.+..+.+.+.|++.+. .++....-.+.+.++|||..+..
T Consensus 227 ~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 227 DPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 34578888888777777666665542 12222334567899999988754
No 71
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=93.83 E-value=1.8 Score=46.66 Aligned_cols=45 Identities=20% Similarity=0.027 Sum_probs=29.9
Q ss_pred cCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEE
Q psy7891 187 AGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVS 237 (929)
Q Consensus 187 AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 237 (929)
.|++ +.+.|+..|||++..+..... . ..+++++-+|.| .-.+++.
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~~---~-~~~~v~l~~GtG-iG~giv~ 164 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEFT---Q-YPLVMGLILGTG-VGGGLVL 164 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTGG---G-CSEEEEEEESSS-EEEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcCC---C-CCcEEEEEECCc-EEEEEEE
Confidence 4776 589999999998754332211 1 567888888988 4455543
No 72
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=93.45 E-value=0.27 Score=53.16 Aligned_cols=75 Identities=13% Similarity=0.038 Sum_probs=45.3
Q ss_pred HHHHHHHHcCCcEEEEechh-HHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEE
Q psy7891 179 SMLKAGELAGLKVLQLMNDY-TAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSV 257 (929)
Q Consensus 179 al~~Aa~~AGl~~~~li~Ep-tAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v 257 (929)
.+..+-+..|+++ .+|+.. +|.....|...... . ....+|+|+|||||.++++. .| .+
T Consensus 102 fl~~v~~~~G~~i-~vIsg~eEA~l~~~gv~~~l~---~-~~~~lvvDIGGGStEl~~~~--------~~------~~-- 160 (315)
T 1t6c_A 102 FLERVKREVGLVV-EVITPEQEGRYAYLAVAYSLK---P-EGEVCVVDQGGGSTEYVFGK--------GY------KV-- 160 (315)
T ss_dssp HHHHHHHHTCCCE-EECCHHHHHHHHHHHHHHHTC---C-CSEEEEEEEETTEEEEEEEE--------TT------EE--
T ss_pred HHHHHHHHHCCCE-EEcCHHHHHHHHHHHHHhhcc---c-CCCEEEEEeCCCcEEEEEEe--------CC------ce--
Confidence 3444444679987 555544 44443334433221 2 46799999999999999975 12 22
Q ss_pred EEEecCCCcchHHHHHHH
Q psy7891 258 LGVGYDRTLGGLEMQIRL 275 (929)
Q Consensus 258 ~~~~~d~~lGG~~~D~~l 275 (929)
. ...+..+|+..+.+.+
T Consensus 161 ~-~~~Sl~~G~v~l~e~~ 177 (315)
T 1t6c_A 161 R-EVISLPIGIVNLTETF 177 (315)
T ss_dssp E-EEEEECCCHHHHHHHH
T ss_pred e-eEEEEeccHHHHHHHh
Confidence 1 1233579998766553
No 73
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=92.30 E-value=16 Score=40.17 Aligned_cols=48 Identities=23% Similarity=0.239 Sum_probs=31.0
Q ss_pred CccEEEEEcCCcCC-HHHHHHHHHHhCC--------ccCCCCCchHHHHhhHHHHHH
Q psy7891 370 VISQVILVGAGTRV-PKVQEKITKVVGV--------ELSKNLNTDEAAALGAVYKAA 417 (929)
Q Consensus 370 ~I~~ViLvGG~sri-P~v~~~l~~~f~~--------~i~~~~n~deaVA~GAa~~aa 417 (929)
+.+.|+|.||.++. |.+.+.|++.+.. .+......+.+.++|||..+.
T Consensus 314 dP~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 314 GISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp CCCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CCCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 34578888888764 6666666665531 222233456689999998764
No 74
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=91.76 E-value=1 Score=45.78 Aligned_cols=69 Identities=7% Similarity=0.068 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCcCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceeHHHHHH
Q psy7891 760 EALKSLNNALNVSVTFYNSIKNLSLNTNETEDLNLFSDIELKSLDTLINETKVWKEKSEKEQNQLKKSDPIVLTIRSIVE 839 (929)
Q Consensus 760 ~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~ 839 (929)
++...+..++..+++.+..+. ..++.+++..+.+.++++..||+.. ...+|+.
T Consensus 146 e~kn~le~~i~~~~~~l~~~~------------~~l~~~~k~~i~~~l~~~~~~L~~~---------------~~~~i~~ 198 (219)
T 4e81_A 146 QTRNQGDHLLHSTRKQVEEAG------------DKLPADDKTAIESALTALETALKGE---------------DKAAIEA 198 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG------------GGSCHHHHHHHHHHHHHHHHHHHSS---------------CHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhh------------hhCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHH
Confidence 334556666666666665421 4578899999999999999999752 3689999
Q ss_pred HHHHHHHHHHHHHhcc
Q psy7891 840 KIRALEREVRYLENKS 855 (929)
Q Consensus 840 k~~~l~~~~~~i~~k~ 855 (929)
++++|+..+.++..+.
T Consensus 199 ~~~~L~~~~~~i~~~~ 214 (219)
T 4e81_A 199 KMQELAQVSQKLMEIA 214 (219)
T ss_dssp HHHHHHHHTHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998654
No 75
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=90.63 E-value=16 Score=39.39 Aligned_cols=67 Identities=15% Similarity=0.177 Sum_probs=47.9
Q ss_pred HHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHh---CCccCCC---CCchHHHHhhHHHHHHhhc
Q psy7891 349 LFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVV---GVELSKN---LNTDEAAALGAVYKAADLS 420 (929)
Q Consensus 349 l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f---~~~i~~~---~n~deaVA~GAa~~aa~~s 420 (929)
+.+.+...+.++++..+ ++.|+|.||...-.++++.|.+.+ |.++..+ +-.|-++++|+|.+.....
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 305 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKS 305 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHc
Confidence 44455556666666554 468999999999999999999887 4343332 2578899999987655443
No 76
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=90.00 E-value=1.4 Score=45.01 Aligned_cols=71 Identities=11% Similarity=0.118 Sum_probs=53.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhccccCcCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceeHHHH
Q psy7891 758 RPEALKSLNNALNVSVTFYNSIKNLSLNTNETEDLNLFSDIELKSLDTLINETKVWKEKSEKEQNQLKKSDPIVLTIRSI 837 (929)
Q Consensus 758 rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di 837 (929)
+-++...+..++..++..+..+. ..++++++..+...+++++.||+.. ...++
T Consensus 141 ~~e~kn~le~~i~~~~~~l~~~~------------~~~~~~~k~~i~~~l~~~~~wl~~~---------------d~~~~ 193 (227)
T 1u00_A 141 LAEQKVEAARVLESLHGALAADA------------ALLSAAERQVIDDAAAHLSEVAQGD---------------DVDAI 193 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHG------------GGSCHHHHHHHHHHHHHHHHHTTSS---------------CHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh------------ccCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHH
Confidence 33445555666666666665421 4588999999999999999999621 25789
Q ss_pred HHHHHHHHHHHHHHHhcc
Q psy7891 838 VEKIRALEREVRYLENKS 855 (929)
Q Consensus 838 ~~k~~~l~~~~~~i~~k~ 855 (929)
+.|+++|+..+.+|..++
T Consensus 194 ~~~~~~L~~~~~~i~~r~ 211 (227)
T 1u00_A 194 EQAIKNVDKQTQDFAARR 211 (227)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998765
No 77
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=90.00 E-value=0.25 Score=56.78 Aligned_cols=47 Identities=6% Similarity=0.085 Sum_probs=41.0
Q ss_pred cEEEEEcCCcCCHHHHHHHHHH-hCCccCCCCCchHHHHhhHHHHHHhh
Q psy7891 372 SQVILVGAGTRVPKVQEKITKV-VGVELSKNLNTDEAAALGAVYKAADL 419 (929)
Q Consensus 372 ~~ViLvGG~sriP~v~~~l~~~-f~~~i~~~~n~deaVA~GAa~~aa~~ 419 (929)
+.|.++||++|.|.+.+++.++ ||.++.+.. ..|+.|+|||+.|+.-
T Consensus 389 ~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~-~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 389 GRILVEGRFAEADVFVRALASLRPDCAVYTAN-AHNDVSFGALRLIDPG 436 (482)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHSTTSEEEEES-SCCCTTGGGHHHHCTT
T ss_pred CeEEEeCCcccCHHHHHHHhhhcCCCeEEEcC-CCchHHHHHHHHhCcc
Confidence 6899999999999999999999 998775554 4568899999999855
No 78
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=89.08 E-value=1.3 Score=40.38 Aligned_cols=80 Identities=11% Similarity=0.026 Sum_probs=59.0
Q ss_pred hhhcchHHHHHHHHHHHHHHHHHHHhhccccCcCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccee
Q psy7891 754 EHQERPEALKSLNNALNVSVTFYNSIKNLSLNTNETEDLNLFSDIELKSLDTLINETKVWKEKSEKEQNQLKKSDPIVLT 833 (929)
Q Consensus 754 e~~~rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~ 833 (929)
....+-++...+..+|..+++.|.. +.+ ...++++++..|...|+++..||+.. +. -.
T Consensus 12 ~~re~iEarN~aEsliy~~e~~L~e-----~~~-----~dkl~~eek~~I~~~i~el~~~L~~~---~~---------ad 69 (120)
T 2p32_A 12 SGLVPRGSHMGLESYAFNLKQTIED-----EKL-----KDKISPEDKKKIEDKCDEILKWLDSN---QT---------AE 69 (120)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHTC-----TTT-----GGGSCHHHHHHHHHHHHHHHHHHHHH---TT---------CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-----hhh-----hccCCHHHHHHHHHHHHHHHHHHHcC---Cc---------CC
Confidence 3455667777777777777765532 111 14689999999999999999999741 10 12
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q psy7891 834 IRSIVEKIRALEREVRYLENKS 855 (929)
Q Consensus 834 ~~di~~k~~~l~~~~~~i~~k~ 855 (929)
..+|+.++++|+..+.+|+.++
T Consensus 70 ~e~ik~k~~eL~~~~~~i~~k~ 91 (120)
T 2p32_A 70 KEEFEHQQKDLEGLANPIISKL 91 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999998766
No 79
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=88.48 E-value=2.8 Score=43.46 Aligned_cols=21 Identities=24% Similarity=0.335 Sum_probs=18.5
Q ss_pred CeEEEEEcCccceEEEEEECC
Q psy7891 25 IAVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~g 45 (929)
+..++||+|+|++++|++..+
T Consensus 3 ~M~L~IDIGNT~ik~gl~~~~ 23 (249)
T 3bex_A 3 PMYLLVDVGNTHSVFSITEDG 23 (249)
T ss_dssp CEEEEEEECSSEEEEEEESSS
T ss_pred ceEEEEEECCCeEEEEEEECC
Confidence 357999999999999999865
No 80
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=87.58 E-value=1.9 Score=38.72 Aligned_cols=72 Identities=13% Similarity=0.080 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCcCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceeHHHHHHHH
Q psy7891 762 LKSLNNALNVSVTFYNSIKNLSLNTNETEDLNLFSDIELKSLDTLINETKVWKEKSEKEQNQLKKSDPIVLTIRSIVEKI 841 (929)
Q Consensus 762 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~ 841 (929)
-..+..++..+++.+.. +.+ ...++++++..|...|+++..||+..... ...+|+.++
T Consensus 6 rN~aE~~iy~~e~~L~~-----~e~-----~~kl~~~ek~~i~~~i~~l~~~L~~~~~a------------d~~~i~~~~ 63 (113)
T 1ud0_A 6 SHMLESYAFNMKATVED-----EKL-----QGKINDEDKQKILDKCNEIISWLDKNQTA------------EKEEFEHQQ 63 (113)
T ss_dssp HHHHHHHHHHHHHHHTS-----GGG-----TTTSCHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcc-----hhh-----hccCCHHHHHHHHHHHHHHHHHHHcCCcc------------CHHHHHHHH
Confidence 34455566655554431 011 15799999999999999999999742110 136799999
Q ss_pred HHHHHHHHHHHhcc
Q psy7891 842 RALEREVRYLENKS 855 (929)
Q Consensus 842 ~~l~~~~~~i~~k~ 855 (929)
+.|+..+.+|..++
T Consensus 64 ~~L~~~~~~i~~~~ 77 (113)
T 1ud0_A 64 KELEKVCNPIITKL 77 (113)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998766
No 81
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=86.73 E-value=48 Score=38.16 Aligned_cols=42 Identities=21% Similarity=0.300 Sum_probs=31.7
Q ss_pred HHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhC
Q psy7891 349 LFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVG 395 (929)
Q Consensus 349 l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~ 395 (929)
+++-+...+.++++..+ ++.|+|+||-+.-..+++.|.+.+.
T Consensus 232 ~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~ 273 (540)
T 3en9_A 232 AFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCE 273 (540)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHH
Confidence 34444555566666554 4689999999999999999998764
No 82
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=86.69 E-value=1.4 Score=47.34 Aligned_cols=55 Identities=13% Similarity=0.155 Sum_probs=35.7
Q ss_pred HHHHHHHHcCCcEEEEechhHHHHHHh-cccccccCCCCCCcEEEEEEcCCceEEEEEEE
Q psy7891 179 SMLKAGELAGLKVLQLMNDYTAVALNY-GIFKRKDFNETNPVHVMFYDMGAWSTTVSIVS 237 (929)
Q Consensus 179 al~~Aa~~AGl~~~~li~EptAAAl~y-~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 237 (929)
.+..+-+..|+++ .+|+...=|.+.| |...... .. ....||+|+|||||.++++.
T Consensus 94 fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~--~~-~~~~lviDIGGGStEl~~~~ 149 (315)
T 3mdq_A 94 LIDRIKKEVNIDV-EVIDGAREAELIFRGVQQAVP--ME-DHISLAMDIGGGSVEFIIGN 149 (315)
T ss_dssp HHHHHHHHHCCCE-EECCHHHHHHHHHHHHHHHSC--CT-TCCEEEEEECSSCEEEEEEC
T ss_pred HHHHHHHHHCCCe-EEeCHHHHHHHHHHHHHhcCC--CC-CCCEEEEEeCCCceEEEEEE
Confidence 3444555679987 6666555444443 4433222 12 45799999999999999986
No 83
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=83.69 E-value=2.3 Score=50.21 Aligned_cols=69 Identities=7% Similarity=0.068 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCcCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceeHHHHHH
Q psy7891 760 EALKSLNNALNVSVTFYNSIKNLSLNTNETEDLNLFSDIELKSLDTLINETKVWKEKSEKEQNQLKKSDPIVLTIRSIVE 839 (929)
Q Consensus 760 ~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~ 839 (929)
++...+..++..++..+..+. ..+++++++.+.+.+++++.||+.. ...+++.
T Consensus 534 ~~~n~~e~~~~~~~~~l~~~~------------~~~~~~~~~~i~~~~~~~~~~l~~~---------------~~~~~~~ 586 (605)
T 2kho_A 534 QTRNQGDHLLHSTRKQVEEAG------------DKLPADDKTAIESALTALETALKGE---------------DKAAIEA 586 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG------------GGSCHHHHHHHHHHHHHHHHHTTSS---------------CHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhh------------ccCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHH
Confidence 344455566666666554421 4588999999999999999999621 5688999
Q ss_pred HHHHHHHHHHHHHhcc
Q psy7891 840 KIRALEREVRYLENKS 855 (929)
Q Consensus 840 k~~~l~~~~~~i~~k~ 855 (929)
++++|+..+.++..++
T Consensus 587 ~~~~l~~~~~~~~~~~ 602 (605)
T 2kho_A 587 KMQELAQVSQKLMEIA 602 (605)
T ss_dssp HHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 84
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=83.66 E-value=4.8 Score=47.44 Aligned_cols=66 Identities=8% Similarity=0.071 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHhhccccCcCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceeHHHHHHHHH
Q psy7891 763 KSLNNALNVSVTFYNSIKNLSLNTNETEDLNLFSDIELKSLDTLINETKVWKEKSEKEQNQLKKSDPIVLTIRSIVEKIR 842 (929)
Q Consensus 763 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~ 842 (929)
..+..++..+++.+..+. ..+++++++.+...+++++.||+.. ...+++.+.+
T Consensus 537 n~~e~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~l~~~---------------~~~~~~~~~~ 589 (605)
T 4b9q_A 537 NQGDHLLHSTRKQVEEAG------------DKLPADDKTAIESALTALETALKGE---------------DKAAIEAKMQ 589 (605)
T ss_dssp HHHHHHHHHHHHHHHHHG------------GGSCHHHHHHHHHHHHHHHHHHHSS---------------CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhh------------hhCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHH
Confidence 445556666665555421 4688899999999999999999732 1579999999
Q ss_pred HHHHHHHHHHhcc
Q psy7891 843 ALEREVRYLENKS 855 (929)
Q Consensus 843 ~l~~~~~~i~~k~ 855 (929)
+|+..+.+++.++
T Consensus 590 ~l~~~~~~~~~~~ 602 (605)
T 4b9q_A 590 ELAQVSQKLMEIA 602 (605)
T ss_dssp HHHHHTHHHHHHC
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998776
No 85
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=83.50 E-value=2 Score=46.86 Aligned_cols=57 Identities=16% Similarity=0.248 Sum_probs=36.3
Q ss_pred HHHHHHHHcCCcEEEEechhHHHHHHh-cccccccCCCCCCcEEEEEEcCCceEEEEEEE
Q psy7891 179 SMLKAGELAGLKVLQLMNDYTAVALNY-GIFKRKDFNETNPVHVMFYDMGAWSTTVSIVS 237 (929)
Q Consensus 179 al~~Aa~~AGl~~~~li~EptAAAl~y-~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 237 (929)
.+..+-+..|+++ .+|+...=|.+.| |.......... ...++++|+|||||+++++.
T Consensus 107 fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~~~~~-~~~~lviDIGGGStel~~~~ 164 (343)
T 3cer_A 107 FEDEIERILGVRP-EVIPGTEEADLSFLGATSVVNRDDL-PAPYLVVDLGGGSTELVIGG 164 (343)
T ss_dssp HHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCCTTTC-CSSEEEEEECSSCEEEEECC
T ss_pred HHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCccccc-cCCEEEEEeCCCceEEEEee
Confidence 3444445579986 7777666555555 33222211001 35699999999999999865
No 86
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=83.30 E-value=4 Score=47.07 Aligned_cols=113 Identities=16% Similarity=0.129 Sum_probs=61.6
Q ss_pred eeHHHHHHHHHHHHHHHHHhhcccccceEEEEecCCCCHHHHH------HHHHHHHHcCCcEEEEechhHHHHHHh-ccc
Q psy7891 136 YHVEELVAMLLHKAREYASVSAGQVINEAVIIVPGYFNQIERQ------SMLKAGELAGLKVLQLMNDYTAVALNY-GIF 208 (929)
Q Consensus 136 ~~~eel~a~~L~~lk~~a~~~~~~~v~~~VItVPa~f~~~qR~------al~~Aa~~AGl~~~~li~EptAAAl~y-~~~ 208 (929)
++++ .+...+.-|+...+..-+..+.++.+ .-|..-|. .+..+-+..|+++ .+|+...=|.+.| |..
T Consensus 57 Ls~e-ai~r~~~~L~~f~~~~~~~~v~~v~~----vATsA~R~A~N~~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~ 130 (513)
T 1u6z_A 57 LSEE-AMTRGLNCLSLFAERLQGFSPASVCI----VGTHTLRQALNATDFLKRAEKVIPYPI-EIISGNEEARLIFMGVE 130 (513)
T ss_dssp BCHH-HHHHHHHHHHHHHHHTTTCCGGGEEE----EECHHHHHCTTHHHHHHHHTTTCSSCE-EECCHHHHHHHHHHHHH
T ss_pred cCHH-HHHHHHHHHHHHHHHHHhCCCCEEEE----EecHHHHcCcCHHHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHH
Confidence 4433 34444444444444333334444321 23444443 3444444569987 7777666555554 443
Q ss_pred ccccCCCCCCcEEEEEEcCCceEEEEEEEEEeeccccCCcccCCCcEEEEEEecCCCcchHHHHHHH
Q psy7891 209 KRKDFNETNPVHVMFYDMGAWSTTVSIVSYQVVKTKERGFVETHPQVSVLGVGYDRTLGGLEMQIRL 275 (929)
Q Consensus 209 ~~~~~~~~~~~~vlv~D~GggT~dvsvv~~~~~~~~~~G~~~~~~~~~v~~~~~d~~lGG~~~D~~l 275 (929)
.... . ....+|+|+|||||.++++. .| .+ .. .....+|...+.+.+
T Consensus 131 ~~~~--~--~~~~lviDIGGGStEl~~~~--------~~------~~--~~-~~Sl~lG~vrlte~f 176 (513)
T 1u6z_A 131 HTQP--E--KGRKLVIDIGGGSTELVIGE--------NF------EP--IL-VESRRMGCVSFAQLY 176 (513)
T ss_dssp HHSC--C--CSCEEEEEECSSCEEEEEEE--------TT------EE--EE-EEEESCCHHHHHHHH
T ss_pred hhcc--C--CCCEEEEEECCCcEEEEEEe--------CC------ee--eE-EEEEeccHHHHHHHH
Confidence 3222 1 23689999999999999875 12 22 11 223579988776554
No 87
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=83.12 E-value=3.4 Score=47.57 Aligned_cols=53 Identities=11% Similarity=0.124 Sum_probs=35.3
Q ss_pred HHHHHHHHcCCcEEEEechhHHHHHHh-cccccccCCCCCCcEEEEEEcCCceEEEEEEE
Q psy7891 179 SMLKAGELAGLKVLQLMNDYTAVALNY-GIFKRKDFNETNPVHVMFYDMGAWSTTVSIVS 237 (929)
Q Consensus 179 al~~Aa~~AGl~~~~li~EptAAAl~y-~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 237 (929)
.+..+-+..|+++ .+|+...=|.+.| |...... ....||+|+|||||.++++.
T Consensus 105 fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~-----~~~~lvvDIGGGStEl~~~~ 158 (508)
T 3hi0_A 105 FIREAEAILGCEI-EVLSGEKEALYSAYGVISGFY-----QPDGIAGDLGGGSLELIDIK 158 (508)
T ss_dssp HHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSS-----SCEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCC-----CCCeEEEEeCCCceEEEEee
Confidence 4555555679987 7776665555444 4433322 23459999999999999986
No 88
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=80.75 E-value=29 Score=30.47 Aligned_cols=89 Identities=11% Similarity=0.204 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHhhhhc--------CCCCCHHHHHHHHHHHHhchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHH
Q psy7891 707 ESKTIVDKIDEITNWLEED--------GWNAEADVLENKLNEINSLVVPIWERHREHQERPEALKSLNNALNVSVTFYNS 778 (929)
Q Consensus 707 er~~l~~~l~e~~~WL~~d--------~~~a~~~~~~~kl~eL~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~ 778 (929)
+...|...++++..||.+- ....+.+.+...+++.+.+..-|..+- ..+..+...+..++..
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~----------~~v~~~~~~g~~L~~~ 72 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQ----------GRVGNILQLGSKLIGT 72 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhH----------HHHHHHHHHHHHHHHc
Confidence 4567888889999999631 112455566666666666666555432 2223344444444443
Q ss_pred hhccccCcCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy7891 779 IKNLSLNTNETEDLNLFSDIELKSLDTLINETKVWKEKSEK 819 (929)
Q Consensus 779 ~~~~~~~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~~ 819 (929)
.|++.++...|...++....-|+....
T Consensus 73 --------------~~~~~~~~~~i~~~l~~l~~rw~~L~~ 99 (119)
T 3uun_A 73 --------------GKLSEDEETEVQEQMNLLNSRWECLRV 99 (119)
T ss_dssp --------------TCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467777777788888877777766443
No 89
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=79.95 E-value=28 Score=30.56 Aligned_cols=89 Identities=10% Similarity=0.182 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHhhhhc--------CCCCCHHHHHHHHHHHHhchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHH
Q psy7891 707 ESKTIVDKIDEITNWLEED--------GWNAEADVLENKLNEINSLVVPIWERHREHQERPEALKSLNNALNVSVTFYNS 778 (929)
Q Consensus 707 er~~l~~~l~e~~~WL~~d--------~~~a~~~~~~~kl~eL~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~ 778 (929)
+...+...++++..||.+- ....+.+.+...+++.+.+..-|..+- ..+..+...+..++..
T Consensus 3 ~L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~----------~~v~~v~~~g~~L~~~ 72 (118)
T 3uul_A 3 DLDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQ----------SSVGSVLQAGNQLMTQ 72 (118)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHh
Confidence 3467788888999999631 123456667777777777766665542 2223333444444433
Q ss_pred hhccccCcCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy7891 779 IKNLSLNTNETEDLNLFSDIELKSLDTLINETKVWKEKSEK 819 (929)
Q Consensus 779 ~~~~~~~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~~ 819 (929)
.|++.++...|...++....-|+....
T Consensus 73 --------------~~~~~~~~~~i~~~l~~l~~rw~~L~~ 99 (118)
T 3uul_A 73 --------------GTLSDEEEFEIQEQMTLLNARWEALRV 99 (118)
T ss_dssp --------------TCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------CCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 467777888888888887777766443
No 90
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=78.81 E-value=2.8 Score=45.80 Aligned_cols=46 Identities=11% Similarity=0.140 Sum_probs=28.5
Q ss_pred CCcEEEEechhHHHHHHh-----cccccccCCCCCCcEEEEEEcCCceEEEEEEE
Q psy7891 188 GLKVLQLMNDYTAVALNY-----GIFKRKDFNETNPVHVMFYDMGAWSTTVSIVS 237 (929)
Q Consensus 188 Gl~~~~li~EptAAAl~y-----~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 237 (929)
|+. +++|+...=|.+.| .+.. +....+++++|+|+|||+|.+++..
T Consensus 108 g~~-v~VIsG~eEa~~~~~gv~~~l~~---~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 108 LVE-AKTITGNDEALFDWLAVNYKLDT---LKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp EEE-EEECCHHHHHHHHHHHHHHHTTC---SSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred CCe-EEECChHHHHHHHHHHHHHHhhh---ccccccccEEEEEeCCCceEEEEec
Confidence 554 47777665444443 3321 1111145799999999999999863
No 91
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=78.46 E-value=31 Score=39.11 Aligned_cols=58 Identities=16% Similarity=0.008 Sum_probs=43.1
Q ss_pred CHHHHHHHHHHHHHcCCc--EEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEEE
Q psy7891 173 NQIERQSMLKAGELAGLK--VLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVSY 238 (929)
Q Consensus 173 ~~~qR~al~~Aa~~AGl~--~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~~ 238 (929)
...-.+.|.+|.+.-|++ ++.++|+.+|++++.++.. +..++.+=+|-|+=-+.+..+
T Consensus 184 G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~--------~~~~iglIlGTG~N~~y~e~~ 243 (485)
T 3o8m_A 184 GHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD--------PQTKMGIIIGTGVNGAYYDVV 243 (485)
T ss_dssp TSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC--------TTEEEEEEESSSEEEEEEEEG
T ss_pred CccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC--------CCcEEEEEEecCcceEEEeec
Confidence 466788899999888886 4789999999999876552 456666667888766666553
No 92
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=76.27 E-value=4.3 Score=48.53 Aligned_cols=75 Identities=12% Similarity=0.097 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCcCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceeHHHHHH
Q psy7891 760 EALKSLNNALNVSVTFYNSIKNLSLNTNETEDLNLFSDIELKSLDTLINETKVWKEKSEKEQNQLKKSDPIVLTIRSIVE 839 (929)
Q Consensus 760 ~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~ 839 (929)
++...|...+..++..+.. .+ ...+++++++.+...+++++.||.+.-. --+..+++.
T Consensus 551 ~~~n~le~~i~~~~~~l~~------~~-----~~~~~~~~~~~~~~~l~~~~~wl~~~~~-----------~~~~~~~~~ 608 (675)
T 3d2f_A 551 DRKNTLEEYIYTLRGKLEE------EY-----APFASDAEKTKLQGMLNKAEEWLYDEGF-----------DSIKAKYIA 608 (675)
T ss_dssp HHHHHHHHHHHHHHHHHTT------TT-----GGGSCHHHHHHHHHHHHHHHHHTTTGGG-----------GCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH------HH-----HhhCCHHHHHHHHHHHHHHHHHHhcCCc-----------hhhHHHHHH
Confidence 4445555555555554432 12 1568999999999999999999964210 114678999
Q ss_pred HHHHHHHHHHHHHhccc
Q psy7891 840 KIRALEREVRYLENKSK 856 (929)
Q Consensus 840 k~~~l~~~~~~i~~k~k 856 (929)
|+++|+..++++..+..
T Consensus 609 ~~~~l~~~~~~i~~r~~ 625 (675)
T 3d2f_A 609 KYEELASLGNIIRGRYL 625 (675)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999987663
No 93
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=75.01 E-value=13 Score=42.03 Aligned_cols=55 Identities=13% Similarity=-0.047 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHcCCc--EEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEE
Q psy7891 175 IERQSMLKAGELAGLK--VLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVS 237 (929)
Q Consensus 175 ~qR~al~~Aa~~AGl~--~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 237 (929)
.-++.|.++...-|++ ++.++|+..|++++-.+.. ..+++.+=+|.|+=-..+..
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~--------~~~~iglilGTGvgg~~i~~ 220 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTD--------AXIKMGIIFGSGVNAAYWCD 220 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHC--------TTEEEEEEESSSEEEEEEEC
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcC--------CccEEEEEECcEEEEEEEEC
Confidence 5567777887655665 5899999999999876521 45677777888866555554
No 94
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=74.52 E-value=2.8 Score=36.64 Aligned_cols=21 Identities=24% Similarity=0.447 Sum_probs=18.7
Q ss_pred CeEEEEEcCccceEEEEEECC
Q psy7891 25 IAVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~g 45 (929)
|.++|||||+..+.||+.++.
T Consensus 1 mriLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSC
T ss_pred CcEEEEEeCCCEEEEEEEeCC
Confidence 458999999999999999875
No 95
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=74.05 E-value=20 Score=37.48 Aligned_cols=47 Identities=19% Similarity=0.134 Sum_probs=32.8
Q ss_pred ccEEEEEcCCcCCHHHHHHHHHHhCCc-------cCCCCCchHHHHhhHHHHHH
Q psy7891 371 ISQVILVGAGTRVPKVQEKITKVVGVE-------LSKNLNTDEAAALGAVYKAA 417 (929)
Q Consensus 371 I~~ViLvGG~sriP~v~~~l~~~f~~~-------i~~~~n~deaVA~GAa~~aa 417 (929)
.+.|+|.||.+..+.+.+.|++.+... +......+.+.++|||+.+.
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHHh
Confidence 457888888887788888888777531 22233456789999998763
No 96
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=72.98 E-value=41 Score=36.07 Aligned_cols=44 Identities=18% Similarity=0.064 Sum_probs=29.4
Q ss_pred cCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEE
Q psy7891 187 AGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIV 236 (929)
Q Consensus 187 AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv 236 (929)
.|++ +.+.|+..|||++..+..... . ..+++++-+|.| .-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~---~-~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGK---G-LENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTT---T-CSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCC---C-CCcEEEEEECCC-EEEEEE
Confidence 4776 489999999998754432211 1 456788888887 445555
No 97
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=71.07 E-value=22 Score=37.58 Aligned_cols=51 Identities=14% Similarity=0.190 Sum_probs=32.5
Q ss_pred HHHHHHHHHHcCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEE
Q psy7891 177 RQSMLKAGELAGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIV 236 (929)
Q Consensus 177 R~al~~Aa~~AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv 236 (929)
++.+.+. .|++ +.+.|+..|||++-.+..... . .++++++-+|.| .-.+++
T Consensus 90 ~~~l~~~---~~~p-V~v~NDanaaalaE~~~G~~~---~-~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 90 LQTVXNE---MXIP-VGFSTDVNAAALGEFLFGEAX---G-LDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HHHHHHH---HCSC-EEEEEHHHHHHHHHHHHSTTT---T-CSCEEEEEESSS-EEEEEE
T ss_pred HHHHHHH---hCCC-EEEechhHHHHHHHHHhCCCC---C-CCcEEEEEECCc-eEEEEE
Confidence 4445443 4787 489999999998755443211 1 467888888876 444544
No 98
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=70.86 E-value=84 Score=32.16 Aligned_cols=46 Identities=15% Similarity=0.180 Sum_probs=30.0
Q ss_pred cCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEE
Q psy7891 187 AGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVS 237 (929)
Q Consensus 187 AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 237 (929)
.|++ +.+.|+..|||++..+..... .....++++-+|.| .-.+++.
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~~---~~~~~~~~l~~GtG-IG~giv~ 159 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAGA---GVKGTVLVITLGTG-IGSAFIF 159 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTTT---TCCSEEEEEEESSS-EEEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCCC---CCCCcEEEEEECcc-eEEEEEE
Confidence 4776 589999999999854432221 10236777888887 6666653
No 99
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=69.52 E-value=32 Score=38.28 Aligned_cols=44 Identities=25% Similarity=0.244 Sum_probs=29.4
Q ss_pred cCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEE
Q psy7891 187 AGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIV 236 (929)
Q Consensus 187 AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv 236 (929)
.|+++ .+.|+..|||++..+..... . ..+++++-+|.| .-.+++
T Consensus 208 ~~~pV-~v~NDa~aaalaE~~~g~~~---~-~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLPV-FVANDTRAWALAEKLFGHSQ---D-VDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSCE-EEEEHHHHHHHHHHHHSTTT---T-CSSEEEEEESSS-EEEEEE
T ss_pred hCCCE-EEechhHHHHHHHHHhCCCC---C-CCcEEEEEECCc-EEEEEE
Confidence 47774 89999999998754432211 1 467788888887 445555
No 100
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=66.20 E-value=14 Score=40.21 Aligned_cols=69 Identities=13% Similarity=0.200 Sum_probs=44.4
Q ss_pred HHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhC-C------ccCCCCCchHHHHhhHHHHHHh
Q psy7891 346 NEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVG-V------ELSKNLNTDEAAALGAVYKAAD 418 (929)
Q Consensus 346 ~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~-~------~i~~~~n~deaVA~GAa~~aa~ 418 (929)
..-+..-+...|.+.+..... .++.|+++||+++-|++-+.|++.++ . .+..+.+.-||++. |+.|..
T Consensus 262 ~ATLt~~TA~sIa~~~~~~~~---~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aF--A~LA~~ 336 (371)
T 3qbx_A 262 QATLLELSARSISESLLDAQP---DCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAF--AWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT---TCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHH--HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccC---CCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHH--HHHHHH
Confidence 333444444455555554321 46789999999999999999999986 3 23344556676665 555554
Q ss_pred h
Q psy7891 419 L 419 (929)
Q Consensus 419 ~ 419 (929)
.
T Consensus 337 ~ 337 (371)
T 3qbx_A 337 F 337 (371)
T ss_dssp H
T ss_pred H
Confidence 3
No 101
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=65.05 E-value=14 Score=40.14 Aligned_cols=70 Identities=14% Similarity=0.218 Sum_probs=47.2
Q ss_pred HHHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCC-------ccCCCCCchHHHHhhHHHHH
Q psy7891 344 ALNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGV-------ELSKNLNTDEAAALGAVYKA 416 (929)
Q Consensus 344 ~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~-------~i~~~~n~deaVA~GAa~~a 416 (929)
.+..-+..-+...|.+.+.... ..+.|+++||+++-|++-+.|++.++. .+..+.+.-||+|. |+.|
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~LA 340 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWLA 340 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHHH
Confidence 3444444555555666665442 356899999999999999999999952 33444566688777 4555
Q ss_pred Hhh
Q psy7891 417 ADL 419 (929)
Q Consensus 417 a~~ 419 (929)
...
T Consensus 341 ~~~ 343 (370)
T 3cqy_A 341 MRY 343 (370)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 102
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=63.44 E-value=50 Score=36.35 Aligned_cols=44 Identities=11% Similarity=0.201 Sum_probs=29.3
Q ss_pred cCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEE
Q psy7891 187 AGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIV 236 (929)
Q Consensus 187 AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv 236 (929)
.|++ +.+.|+..|||++..+..... . ..+++++-+|.| .-.+++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~~---~-~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGASR---G-ARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTT---T-CSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCCC---C-CCcEEEEEECCc-EEEEEE
Confidence 4776 489999999998754432211 1 466788888887 445555
No 103
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=61.13 E-value=59 Score=35.39 Aligned_cols=23 Identities=22% Similarity=0.303 Sum_probs=19.4
Q ss_pred cCCeEEEEEcCccceEEEEEECC
Q psy7891 23 YGIAVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 23 ~~~~vvGID~GTt~s~va~~~~g 45 (929)
....++|||+|.|++++++++.|
T Consensus 7 d~~~~lgiDIGgt~i~~~l~d~G 29 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQGG 29 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEETT
T ss_pred CCCEEEEEEECcceEEEEEEECC
Confidence 34678999999999999999833
No 104
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=60.85 E-value=4.4 Score=38.37 Aligned_cols=21 Identities=24% Similarity=0.487 Sum_probs=19.0
Q ss_pred CeEEEEEcCccceEEEEEECC
Q psy7891 25 IAVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~g 45 (929)
|.|+|||+|+..|.+|+.++.
T Consensus 3 mriLGiDpG~~riGvAv~d~~ 23 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEM 23 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTT
T ss_pred CEEEEEEccCCEEEEEEEECC
Confidence 679999999999999998764
No 105
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=59.50 E-value=14 Score=41.81 Aligned_cols=20 Identities=20% Similarity=0.210 Sum_probs=17.1
Q ss_pred CcEEEEEEcCCceEEEEEEE
Q psy7891 218 PVHVMFYDMGAWSTTVSIVS 237 (929)
Q Consensus 218 ~~~vlv~D~GggT~dvsvv~ 237 (929)
...++|+|||||+|.++...
T Consensus 189 ~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp CCCCEEEEECSSEEEEEEEC
T ss_pred CCceEEEEcCCCceEEEecc
Confidence 35689999999999999874
No 106
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=58.86 E-value=18 Score=43.72 Aligned_cols=66 Identities=15% Similarity=0.231 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhC---CccCCCC---CchHHHHhhHHHHHHhhcCCc
Q psy7891 353 VGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVG---VELSKNL---NTDEAAALGAVYKAADLSTGF 423 (929)
Q Consensus 353 i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~---~~i~~~~---n~deaVA~GAa~~aa~~s~~f 423 (929)
+...+.++.+..+ ++.|+|.||...--.+++.|.+.+. -++..+. -.|..+|+|+|++|+....++
T Consensus 693 L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~L~~~ 764 (772)
T 4g9i_A 693 FAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLYLEGY 764 (772)
T ss_dssp HHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHHHhcc
Confidence 3444555555443 5689999999999999999999875 2333322 358999999999988755444
No 107
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=58.28 E-value=2.2e+02 Score=31.83 Aligned_cols=62 Identities=11% Similarity=0.071 Sum_probs=44.4
Q ss_pred ecCCCCHHHHHHHHHHHHHcCCc--EEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEE
Q psy7891 168 VPGYFNQIERQSMLKAGELAGLK--VLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVS 237 (929)
Q Consensus 168 VPa~f~~~qR~al~~Aa~~AGl~--~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 237 (929)
+|..-...-++.|.+|...-|++ ++.++|+.+|++++-++.. +..++.+=+|-|+=-+.+..
T Consensus 166 ~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~--------~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 166 ADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED--------PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp CBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC--------TTEEEEEEESSSEEEEEEEE
T ss_pred CCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC--------CCcEEEEEEeCCcceEEEEc
Confidence 34333566788889998777876 4699999999998776552 45667677888866655555
No 108
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=58.17 E-value=71 Score=33.24 Aligned_cols=68 Identities=7% Similarity=-0.185 Sum_probs=41.2
Q ss_pred HHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCC--HHHHHHHHHHhCCccCCCCCchHHHHhhHHHHHHh
Q psy7891 345 LNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRV--PKVQEKITKVVGVELSKNLNTDEAAALGAVYKAAD 418 (929)
Q Consensus 345 l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sri--P~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~aa~ 418 (929)
.+..++++....+-..+ ...+ ..+.+.|+|.||-++. +.+++.+.+... + ...+..+...||+++|..
T Consensus 211 ~A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~~~~~l~~~l~~~~~-~---i~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-VLRY-NRPDLPLHFIGSVAFHYREVLSSVIKKRGL-T---LGSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-TGGG-CCTTSCEEEESHHHHHTHHHHHHHHHHTTC-C---EEEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-hccc-CCCCceEEEECchHHhhHHHHHHHHHHcCC-e---ecccCcCHHHHHHHHHHh
Confidence 44555666655565555 2222 1145679999998776 666666655421 1 223557889999998853
No 109
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=57.55 E-value=27 Score=41.20 Aligned_cols=65 Identities=14% Similarity=0.125 Sum_probs=47.0
Q ss_pred HHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHh-CCccC---CCCCchHHHHhhHHHHHHh
Q psy7891 349 LFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVV-GVELS---KNLNTDEAAALGAVYKAAD 418 (929)
Q Consensus 349 l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f-~~~i~---~~~n~deaVA~GAa~~aa~ 418 (929)
+.+.+.+.+.++++.. .++.|+|+||.+.-.++++.|.+.+ |.++. ...-.|-++++|.|+.|+.
T Consensus 583 la~~L~~~~~ra~~~~-----g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 583 LAQGFAALMREQATMR-----GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHHTT-----TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-----CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 3334444444554443 3568999999999999999999988 53332 3455799999999998864
No 110
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=57.00 E-value=8.6 Score=36.68 Aligned_cols=19 Identities=16% Similarity=0.361 Sum_probs=17.3
Q ss_pred CeEEEEEcCccceEEEEEE
Q psy7891 25 IAVMSVDLGSEWMKVAIVS 43 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~ 43 (929)
|.|+|||.|++++..|++.
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 5699999999999999985
No 111
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=54.71 E-value=27 Score=39.18 Aligned_cols=59 Identities=19% Similarity=0.164 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHc----CC--cEEEEechhHHHHH-----HhcccccccCCCCCCcEEEEEEcCCceEEEEEEE
Q psy7891 176 ERQSMLKAGELA----GL--KVLQLMNDYTAVAL-----NYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVS 237 (929)
Q Consensus 176 qR~al~~Aa~~A----Gl--~~~~li~EptAAAl-----~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 237 (929)
++..++++++.. |+ .-+++|+...=+.+ +|.+..-.. .. ...+.++|||||+++++...
T Consensus 130 ~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~vnyllg~l~~--~~-~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 130 SADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWITINYLLGRFKT--PG-GSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp HHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTC------CCCCEEEEECSSEEEEEECC
T ss_pred HHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHHHHhhhccccC--CC-CCceEEEecCCCceEEEecc
Confidence 345555555432 44 34688876654443 444332110 01 35688999999999998754
No 112
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=51.34 E-value=2e+02 Score=32.01 Aligned_cols=61 Identities=15% Similarity=0.078 Sum_probs=40.4
Q ss_pred cCCCCHHHHHHHHHHHHHcC---CcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEE
Q psy7891 169 PGYFNQIERQSMLKAGELAG---LKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVS 237 (929)
Q Consensus 169 Pa~f~~~qR~al~~Aa~~AG---l~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 237 (929)
|..-...-.+.|.+|...-| ++++.++|+.+|+.++.++.. +...+-+=+|-|+=-+.+-+
T Consensus 155 ~~~~G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~--------~~~~iglIlGTGtNa~y~e~ 218 (445)
T 3hm8_A 155 SDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED--------PRCEIGLIVGTGTNACYMEE 218 (445)
T ss_dssp BTCTTSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC--------TTEEEEEEESSSEEEEEEEE
T ss_pred CCCCCCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC--------CCceEEEEEeCCceEEEEEe
Confidence 33334556778888887653 568899999999998866542 34555555777765544433
No 113
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=49.85 E-value=25 Score=42.19 Aligned_cols=63 Identities=19% Similarity=0.213 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHh---CCccC---CCCCchHHHHhhHHHHHHhhc
Q psy7891 353 VGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVV---GVELS---KNLNTDEAAALGAVYKAADLS 420 (929)
Q Consensus 353 i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f---~~~i~---~~~n~deaVA~GAa~~aa~~s 420 (929)
+.+.+.++++..+ ++.|+|.||.+.-..+++.|.+.+ |.++. ...-.|-++|+|.|++|+...
T Consensus 681 L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 681 TYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp HHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 3334444444443 568999999999999999999887 33332 233468999999999987554
No 114
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=48.54 E-value=11 Score=34.98 Aligned_cols=20 Identities=25% Similarity=0.375 Sum_probs=18.4
Q ss_pred eEEEEEcCccceEEEEEECC
Q psy7891 26 AVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 26 ~vvGID~GTt~s~va~~~~g 45 (929)
.++|||||+..+.||+.++.
T Consensus 4 ~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp EEEEEECCSSEEEEEEEETT
T ss_pred eEEEEEeCCCEEEEEEEcCC
Confidence 58999999999999999875
No 115
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=47.93 E-value=12 Score=43.09 Aligned_cols=20 Identities=25% Similarity=0.270 Sum_probs=18.2
Q ss_pred CCeEEEEEcCccceEEEEEE
Q psy7891 24 GIAVMSVDLGSEWMKVAIVS 43 (929)
Q Consensus 24 ~~~vvGID~GTt~s~va~~~ 43 (929)
...+||||+|||++++++++
T Consensus 4 ~~~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEE
T ss_pred CcEEEEEEeccccEEEEEEE
Confidence 35689999999999999998
No 116
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=46.48 E-value=11 Score=43.19 Aligned_cols=21 Identities=19% Similarity=0.262 Sum_probs=18.7
Q ss_pred CeEEEEEcCccceEEEEEECC
Q psy7891 25 IAVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~g 45 (929)
..+||||+|||++++++++..
T Consensus 7 ~~~lgIDiGtts~k~~l~d~~ 27 (508)
T 3ifr_A 7 RQVIGLDIGTTSTIAILVRLP 27 (508)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CEEEEEEecCcceEEEEECCC
Confidence 468999999999999999854
No 117
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=44.33 E-value=14 Score=42.89 Aligned_cols=21 Identities=14% Similarity=0.254 Sum_probs=18.6
Q ss_pred CeEEEEEcCccceEEEEEECC
Q psy7891 25 IAVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~g 45 (929)
..+||||+|||++++++++..
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~ 25 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFDLQ 25 (554)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred cEEEEEEECcccEEEEEECCC
Confidence 468999999999999999754
No 118
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=43.71 E-value=13 Score=42.99 Aligned_cols=21 Identities=19% Similarity=0.275 Sum_probs=18.7
Q ss_pred CeEEEEEcCccceEEEEEECC
Q psy7891 25 IAVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~g 45 (929)
..+||||+|||++++++++..
T Consensus 10 ~~~lgID~GTts~Ka~l~d~~ 30 (538)
T 4bc3_A 10 RCCLGWDFSTQQVKVVAVDAE 30 (538)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CEEEEEEEcCcCEEEEEECCC
Confidence 479999999999999999754
No 119
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=43.43 E-value=14 Score=43.08 Aligned_cols=20 Identities=20% Similarity=0.311 Sum_probs=18.2
Q ss_pred CeEEEEEcCccceEEEEEEC
Q psy7891 25 IAVMSVDLGSEWMKVAIVSP 44 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~ 44 (929)
..+||||+|||++++++++.
T Consensus 5 ~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 5 KYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp CEEEEEEECSSEEEEEEEET
T ss_pred CEEEEEecCCcceEEEEEEC
Confidence 46899999999999999985
No 120
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=42.80 E-value=16 Score=41.82 Aligned_cols=21 Identities=24% Similarity=0.309 Sum_probs=18.7
Q ss_pred CeEEEEEcCccceEEEEEECC
Q psy7891 25 IAVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~g 45 (929)
..+||||+|||++++++++..
T Consensus 5 ~~~lgIDiGtts~k~~l~d~~ 25 (506)
T 3h3n_X 5 NYVMAIDQGTTSSRAIIFDRN 25 (506)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CEEEEEEcCCCceEEEEECCC
Confidence 468999999999999999764
No 121
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=42.66 E-value=14 Score=42.53 Aligned_cols=21 Identities=10% Similarity=0.268 Sum_probs=18.3
Q ss_pred CeEEEEEcCccceEEEEEECC
Q psy7891 25 IAVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~g 45 (929)
..+||||+|||++++++++..
T Consensus 3 ~~~lgIDiGtts~k~~l~d~~ 23 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVMDHD 23 (510)
T ss_dssp CEEEEEEECSSEEEEEEECTT
T ss_pred cEEEEEEcCCcceEEEEECCC
Confidence 368999999999999999754
No 122
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=42.42 E-value=16 Score=35.05 Aligned_cols=21 Identities=19% Similarity=0.384 Sum_probs=18.2
Q ss_pred CeEEEEEcCccceEEEEEECC
Q psy7891 25 IAVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~g 45 (929)
|-|+|||.|++++..|++...
T Consensus 1 MrILGIDPGl~~tG~gvi~~~ 21 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVAVE 21 (166)
T ss_dssp CEEEEEECCSSEEEEEEEEEC
T ss_pred CEEEEEccccCceEEEEEEec
Confidence 569999999999999998643
No 123
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=42.29 E-value=62 Score=26.20 Aligned_cols=45 Identities=22% Similarity=0.265 Sum_probs=37.1
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHhhhchhhhccCCC
Q psy7891 658 KSLSKLDSLNQIEHAKVRKEKALNSLESLLFDAKSKLELEEYSSVAA 704 (929)
Q Consensus 658 ~~~~~l~~~~~~D~~~~~~~eakN~LEs~iy~~r~~L~~~~~~~~~~ 704 (929)
...++.+++..+|...++++......|+-|-.+|+.| +.|..+++
T Consensus 27 ~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseL--DKfrSVl~ 71 (72)
T 3nmd_A 27 ALQEKIEELRQRDALIDELELELDQKDELIQMLQNEL--DKYRSVIR 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhccCC
Confidence 3456778899999999999999999999999999988 56766554
No 124
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=41.99 E-value=1e+02 Score=37.95 Aligned_cols=57 Identities=12% Similarity=0.058 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHHHHc-CC--cEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEE
Q psy7891 173 NQIERQSMLKAGELA-GL--KVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVS 237 (929)
Q Consensus 173 ~~~qR~al~~Aa~~A-Gl--~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 237 (929)
...-.+.|.+|...- |+ +++.++|+.+|++++-++.. +..++.+=+|.|+=-+.+..
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~--------~~~~iglIlGTG~na~y~e~ 689 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE--------PTCEVGLIVGTGSNACYMEE 689 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC--------TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC--------CCcEEEEEEeCCeeEEEEEc
Confidence 556677888888643 45 58999999999998776552 45666666788876555544
No 125
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=41.39 E-value=15 Score=42.05 Aligned_cols=20 Identities=20% Similarity=0.293 Sum_probs=17.9
Q ss_pred eEEEEEcCccceEEEEEECC
Q psy7891 26 AVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 26 ~vvGID~GTt~s~va~~~~g 45 (929)
.++|||+|||++++++++..
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~ 24 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEE 24 (503)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEeCCcceEEEEECCC
Confidence 58999999999999999755
No 126
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=41.33 E-value=14 Score=42.21 Aligned_cols=20 Identities=25% Similarity=0.305 Sum_probs=17.6
Q ss_pred CeEEEEEcCccceEEEEEEC
Q psy7891 25 IAVMSVDLGSEWMKVAIVSP 44 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~ 44 (929)
..++|||+|||++++++++.
T Consensus 4 ~~~lgiDiGtts~k~~l~d~ 23 (489)
T 2uyt_A 4 RNCVAVDLGASSGRVMLARY 23 (489)
T ss_dssp EEEEEEEECSSEEEEEEEEE
T ss_pred ceEEEEEecCCCceEEEEEe
Confidence 35899999999999999964
No 127
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=40.94 E-value=13 Score=42.45 Aligned_cols=20 Identities=30% Similarity=0.441 Sum_probs=17.3
Q ss_pred eEEEEEcCccceEEEEEECC
Q psy7891 26 AVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 26 ~vvGID~GTt~s~va~~~~g 45 (929)
.++|||+|||++++++++..
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~ 26 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLD 26 (482)
T ss_dssp -CEEEEECSSEEEEEEECTT
T ss_pred eEEEEEcCCCCeEEEEEECC
Confidence 58999999999999999754
No 128
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=40.85 E-value=15 Score=42.00 Aligned_cols=21 Identities=14% Similarity=0.284 Sum_probs=18.4
Q ss_pred CeEEEEEcCccceEEEEEECC
Q psy7891 25 IAVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 25 ~~vvGID~GTt~s~va~~~~g 45 (929)
..+||||+|||++++++++..
T Consensus 6 ~~~lgIDiGtts~k~~l~d~~ 26 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQK 26 (501)
T ss_dssp CEEEEEEECSSEEEEEEECTT
T ss_pred cEEEEEEeCccceEEEEEcCC
Confidence 369999999999999999754
No 129
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=40.67 E-value=3.4e+02 Score=30.37 Aligned_cols=58 Identities=12% Similarity=-0.003 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHHHHHcC---CcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEE
Q psy7891 172 FNQIERQSMLKAGELAG---LKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVS 237 (929)
Q Consensus 172 f~~~qR~al~~Aa~~AG---l~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 237 (929)
-...-.+.|.+|.+.-| ++++.++|+.+|..++.++.. +...+-+=+|-||=-+.+-+
T Consensus 182 ~G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~--------~~~~iGlI~GTGtNa~Y~E~ 242 (470)
T 3f9m_A 182 EGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED--------HQCEVGMIVGTGCNACYMEE 242 (470)
T ss_dssp BTSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC--------TTEEEEEEESSSEEEEEEEE
T ss_pred CCccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC--------CCceEEEEEecCCceEEeee
Confidence 34566888889998877 468999999999888765542 34444444788866444433
No 130
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=39.94 E-value=39 Score=39.08 Aligned_cols=65 Identities=15% Similarity=0.086 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCC-ccC-CCCCchHHHHhhHHHHHHhhcC
Q psy7891 352 RVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGV-ELS-KNLNTDEAAALGAVYKAADLST 421 (929)
Q Consensus 352 ~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~-~i~-~~~n~deaVA~GAa~~aa~~s~ 421 (929)
-+...+..+++..+ ++.|.|.||.+.--.+++.|.+..+. .+. ...-.|.++++|+|+++....+
T Consensus 294 ~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a~~~~g 360 (576)
T 3ven_A 294 AVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAVAVELG 360 (576)
T ss_dssp HHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHHHHHcC
Confidence 34444555555443 57999999999999999999877552 332 2346789999999999987644
No 131
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=39.89 E-value=16 Score=41.93 Aligned_cols=20 Identities=20% Similarity=0.383 Sum_probs=18.0
Q ss_pred eEEEEEcCccceEEEEEECC
Q psy7891 26 AVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 26 ~vvGID~GTt~s~va~~~~g 45 (929)
.++|||+|||++++++++..
T Consensus 6 ~~lgIDiGtts~k~~l~d~~ 25 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRD 25 (511)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEeCCCceEEEEECCC
Confidence 68999999999999999754
No 132
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=39.74 E-value=17 Score=37.89 Aligned_cols=20 Identities=10% Similarity=0.353 Sum_probs=18.4
Q ss_pred eEEEEEcCccceEEEEEECC
Q psy7891 26 AVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 26 ~vvGID~GTt~s~va~~~~g 45 (929)
.+++||+|+|++++|++..+
T Consensus 3 MlL~IDIGNT~iK~gl~d~~ 22 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGD 22 (266)
T ss_dssp CEEEEEECSSEEEEEEEETT
T ss_pred eEEEEEECCCeEEEEEEECC
Confidence 48999999999999999876
No 133
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=39.63 E-value=15 Score=41.90 Aligned_cols=20 Identities=10% Similarity=0.250 Sum_probs=17.7
Q ss_pred eEEEEEcCccceEEEEEECC
Q psy7891 26 AVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 26 ~vvGID~GTt~s~va~~~~g 45 (929)
.++|||+|||++++++++..
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~ 22 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLE 22 (495)
T ss_dssp CEEEEEECSSEEEEEEECTT
T ss_pred EEEEEeeCCcceEEEEECCC
Confidence 48999999999999999754
No 134
>2nr5_A Hypothetical protein SO2669; PSI-2, MCSG, MAD, structural G protein structure initiative, midwest center for structural genomics; 1.90A {Shewanella oneidensis} SCOP: a.25.6.1
Probab=39.60 E-value=1.1e+02 Score=22.80 Aligned_cols=37 Identities=19% Similarity=0.337 Sum_probs=23.1
Q ss_pred HHhhhchhhhccCCChhHHHHHHHHHHHHHHhhhhcC
Q psy7891 690 AKSKLELEEYSSVAAPNESKTIVDKIDEITNWLEEDG 726 (929)
Q Consensus 690 ~r~~L~~~~~~~~~~~~er~~l~~~l~e~~~WL~~d~ 726 (929)
+|..-..++-.+...-.+.+-..+.+.++++||..+.
T Consensus 28 irqlcgaedssdssdmqeveiwtnrikeledwlwges 64 (67)
T 2nr5_A 28 IRQLCGAEDSSDSSDMQEVEIWTNRIKELEDWLWGES 64 (67)
T ss_dssp HHHTTTTTCC----HHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHhCCccCCcchhhHHHHHHHHHHHHHHHHhhcCC
Confidence 3443332344445555678888999999999998654
No 135
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=39.27 E-value=16 Score=41.63 Aligned_cols=20 Identities=25% Similarity=0.313 Sum_probs=17.8
Q ss_pred eEEEEEcCccceEEEEEECC
Q psy7891 26 AVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 26 ~vvGID~GTt~s~va~~~~g 45 (929)
.++|||+|||++++++++..
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~ 23 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRE 23 (497)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCCchhEEEEECCC
Confidence 58999999999999999754
No 136
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=38.91 E-value=16 Score=42.08 Aligned_cols=20 Identities=10% Similarity=0.328 Sum_probs=18.0
Q ss_pred eEEEEEcCccceEEEEEECC
Q psy7891 26 AVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 26 ~vvGID~GTt~s~va~~~~g 45 (929)
.+||||+|||++++++++..
T Consensus 27 ~~lgIDiGtts~k~~l~d~~ 46 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGN 46 (520)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred eEEEEEeCCcceEEEEECCC
Confidence 68999999999999999754
No 137
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=38.52 E-value=16 Score=41.51 Aligned_cols=19 Identities=26% Similarity=0.515 Sum_probs=17.0
Q ss_pred EEEEEcCccceEEEEEECC
Q psy7891 27 VMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 27 vvGID~GTt~s~va~~~~g 45 (929)
++|||+|||++++++++..
T Consensus 2 ~lgiDiGtt~~k~~l~d~~ 20 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQ 20 (484)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCcccEEEEECCC
Confidence 6899999999999999754
No 138
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=38.15 E-value=30 Score=36.63 Aligned_cols=46 Identities=13% Similarity=0.179 Sum_probs=38.4
Q ss_pred HHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhC
Q psy7891 347 EDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVG 395 (929)
Q Consensus 347 ~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~ 395 (929)
......+...|+++|+++++++++|+.|+..|+++++ -+.+.+.||
T Consensus 214 ~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg 259 (317)
T 1hnj_A 214 KVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLG 259 (317)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 3445677788999999999999999999999998765 456888888
No 139
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=37.23 E-value=19 Score=41.12 Aligned_cols=20 Identities=15% Similarity=0.328 Sum_probs=17.8
Q ss_pred eEEEEEcCccceEEEEEECC
Q psy7891 26 AVMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 26 ~vvGID~GTt~s~va~~~~g 45 (929)
.++|||+|||++++++++..
T Consensus 3 ~~lgiDiGtts~k~~l~d~~ 22 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHS 22 (504)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCCcceEEEEECCC
Confidence 58999999999999999754
No 140
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=35.93 E-value=44 Score=34.70 Aligned_cols=44 Identities=20% Similarity=0.112 Sum_probs=30.6
Q ss_pred cCCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceEEEEEEE
Q psy7891 187 AGLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWSTTVSIVS 237 (929)
Q Consensus 187 AGl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~dvsvv~ 237 (929)
.|++ +.+.|+..|||++..+..... . . +++++-+|.| .-.+++.
T Consensus 96 ~~~p-v~v~NDa~aaa~~e~~~g~~~---~-~-~~v~l~~GtG-iG~gii~ 139 (289)
T 2aa4_A 96 TNLP-TIAINDAQAAAWAEFQALDGD---I-T-DMVFITVSTG-VGGGVVS 139 (289)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSCTT---C-C-CEEEEEESSS-EEEEEEE
T ss_pred HCCC-EEEechHHHHHHHHHHhCCCC---C-c-eEEEEEeCcc-EEEEEEE
Confidence 4776 589999999998765443221 2 4 8899999998 5666553
No 141
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=35.44 E-value=72 Score=27.75 Aligned_cols=25 Identities=20% Similarity=0.375 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Q psy7891 799 ELKSLDTLINETKVWKEKSEKEQNQ 823 (929)
Q Consensus 799 e~~~l~~~~~~~~~Wl~~~~~~q~~ 823 (929)
++..+.+.++++..||.+.......
T Consensus 3 ~L~~f~~~l~el~~WL~e~e~~l~~ 27 (118)
T 3uul_A 3 DLDSYQIALEEVLTWLLSAEDTFQE 27 (118)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5677888999999999887665554
No 142
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=33.81 E-value=38 Score=37.09 Aligned_cols=48 Identities=23% Similarity=0.198 Sum_probs=34.3
Q ss_pred CccEEEEEcCCcCCHH-HHHHHHHHhCC----ccCCCCCchHHHHhhHHHHHH
Q psy7891 370 VISQVILVGAGTRVPK-VQEKITKVVGV----ELSKNLNTDEAAALGAVYKAA 417 (929)
Q Consensus 370 ~I~~ViLvGG~sriP~-v~~~l~~~f~~----~i~~~~n~deaVA~GAa~~aa 417 (929)
+++.|+|.||.+..+. +.+.|.+.+.. .+...-..+.+.++||+..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 5679999999987544 77888887762 233344455699999998764
No 143
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=32.08 E-value=39 Score=35.50 Aligned_cols=45 Identities=16% Similarity=0.166 Sum_probs=37.3
Q ss_pred HHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhC
Q psy7891 348 DLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVG 395 (929)
Q Consensus 348 ~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~ 395 (929)
.....+...++++|+++++++++|+.|++.|+++++ -+.+.+.||
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg 251 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLN 251 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhC
Confidence 345567788999999999999999999999998765 346778888
No 144
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=31.93 E-value=92 Score=32.78 Aligned_cols=48 Identities=21% Similarity=0.114 Sum_probs=32.4
Q ss_pred CccEEEEEcCCcCC-----HHHHHHHHHHhCC-------ccCCCCCchHHHHhhHHHHHH
Q psy7891 370 VISQVILVGAGTRV-----PKVQEKITKVVGV-------ELSKNLNTDEAAALGAVYKAA 417 (929)
Q Consensus 370 ~I~~ViLvGG~sri-----P~v~~~l~~~f~~-------~i~~~~n~deaVA~GAa~~aa 417 (929)
+.+.|+|-||.++. +.+++.+++++.. ++....-.+.+.++|||..+.
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 45688888888875 4567777766521 222333467899999998875
No 145
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=31.21 E-value=25 Score=37.63 Aligned_cols=70 Identities=9% Similarity=0.114 Sum_probs=37.6
Q ss_pred eHHHHHHHHHHHHhHHHHH----HHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhC-Cc---cCCCCCchHHHH
Q psy7891 338 TRAEFEALNEDLFDRVGYP----VEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVG-VE---LSKNLNTDEAAA 409 (929)
Q Consensus 338 tR~efe~l~~~l~~~i~~~----i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~-~~---i~~~~n~deaVA 409 (929)
+.++.+++.+.+.++..+. +.+++...++ ..|+.+||+ +++-..+.+.++ .. +...-+.+-+-|
T Consensus 244 ~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~~-----~~vv~aG~G---~~L~~~la~~~~~~~~~~~i~~~~s~vapA 315 (334)
T 3cet_A 244 SEIDAENIAKNYYELWKELILENVENVAEKYGS-----KKVVITGLG---ENILKDALADFEVISVAERYGKDVSLATPS 315 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEESTT---HHHHHHHTTTSEEEEHHHHHCHHHHHSHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CeEEEeCCc---HHHHHHHHhhCCeeehhcccCcccccccCH
Confidence 5677777766655555444 4444544433 379999988 455555543322 10 010112455667
Q ss_pred hhHHHH
Q psy7891 410 LGAVYK 415 (929)
Q Consensus 410 ~GAa~~ 415 (929)
.|+|+.
T Consensus 316 ~avA~l 321 (334)
T 3cet_A 316 FAVAEL 321 (334)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777754
No 146
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=30.84 E-value=38 Score=35.89 Aligned_cols=45 Identities=11% Similarity=0.115 Sum_probs=37.4
Q ss_pred HHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhC
Q psy7891 348 DLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVG 395 (929)
Q Consensus 348 ~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~ 395 (929)
-....+...|+++|+++++++++|+.|+..|+++++ -+.+.+.||
T Consensus 217 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 261 (322)
T 1ub7_A 217 FAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLG 261 (322)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 345677788999999999999999999999998764 446788888
No 147
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=30.35 E-value=96 Score=26.87 Aligned_cols=26 Identities=19% Similarity=0.362 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy7891 798 IELKSLDTLINETKVWKEKSEKEQNQ 823 (929)
Q Consensus 798 ~e~~~l~~~~~~~~~Wl~~~~~~q~~ 823 (929)
-++..+...+++...||.+.......
T Consensus 2 l~L~~F~~~l~el~~WL~~~e~~l~~ 27 (119)
T 3uun_A 2 VNLDRYQTALEEVLSWLLSAEDTLQA 27 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 35778889999999999887665544
No 148
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=29.47 E-value=57 Score=34.84 Aligned_cols=44 Identities=14% Similarity=0.186 Sum_probs=36.7
Q ss_pred HHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhC
Q psy7891 349 LFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVG 395 (929)
Q Consensus 349 l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~ 395 (929)
....+...|+++|+++++++++|+.|+..|+++++ -+.+.+.||
T Consensus 229 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg 272 (339)
T 1mzj_A 229 AVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLG 272 (339)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhC
Confidence 45667788999999999999999999999998764 346777887
No 149
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=28.77 E-value=3.4e+02 Score=24.78 Aligned_cols=109 Identities=10% Similarity=0.115 Sum_probs=52.1
Q ss_pred HHHhhHHHHHHHHHhhhchhhhccCCChhHHHHHHHHHHHHHHhhhhc------CCCCCHHHHHHHHHHHHhchhhHHHH
Q psy7891 678 KALNSLESLLFDAKSKLELEEYSSVAAPNESKTIVDKIDEITNWLEED------GWNAEADVLENKLNEINSLVVPIWER 751 (929)
Q Consensus 678 eakN~LEs~iy~~r~~L~~~~~~~~~~~~er~~l~~~l~e~~~WL~~d------~~~a~~~~~~~kl~eL~~~~~pi~~R 751 (929)
...+.|....-.-|.+|++ . -....|...+++.+.||.+- ..--+...+..+++..+.+...|..+
T Consensus 26 ~r~~~L~~~a~~R~~~Le~-s-------~~l~~F~~d~~el~~Wi~ek~~~~~~~~~~d~~~v~~~l~kH~afe~El~a~ 97 (149)
T 3f31_A 26 DRYHRFKELSTLRRQKLED-S-------YRFQFFQRDAEELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFEAEVQAN 97 (149)
T ss_dssp HHTCSCHHHHHHHHHHHHH-H-------HHHHHHHHHHHHHHHHHHHHHHHTTSCSSCSSSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHH-H-------HHHHHHHHHHHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555555531 1 13456667778888888741 00012223444444444443333321
Q ss_pred HHhhhcchHHHHHHHHHHHHHHHHHHHhhccccCcCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy7891 752 HREHQERPEALKSLNNALNVSVTFYNSIKNLSLNTNETEDLNLFSDIELKSLDTLINETKVWKEKSE 818 (929)
Q Consensus 752 ~~e~~~rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~ 818 (929)
- ..+......++.++.. .|+..+++..-...++....+|.+..
T Consensus 98 -------~---~~l~~v~~~g~~Li~~--------------~~~~~~~I~~rl~~l~~~W~~L~~~~ 140 (149)
T 3f31_A 98 -------S---GAIVKLDETGNLMISE--------------GHFASETIRTRLMELHRQWELLLEKM 140 (149)
T ss_dssp -------T---HHHHHHHHHHHHHHHH--------------TCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------H---HHHHHHHHHHHHHHhc--------------CCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1223344444444444 46666666665556665555555544
No 150
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=28.45 E-value=1.2e+02 Score=34.05 Aligned_cols=22 Identities=18% Similarity=0.172 Sum_probs=20.5
Q ss_pred CcEEEEEEcCCceEEEEEEEEE
Q psy7891 218 PVHVMFYDMGAWSTTVSIVSYQ 239 (929)
Q Consensus 218 ~~~vlv~D~GggT~dvsvv~~~ 239 (929)
...+|.+|+||.++-|.+|++.
T Consensus 76 ~G~fLAlDlGGTNfRV~~V~L~ 97 (470)
T 3f9m_A 76 VGDFLSLDLGGTNFRVMLVKVG 97 (470)
T ss_dssp CEEEEEEEESSSEEEEEEEEEE
T ss_pred ceEEEEEEecCceEEEEEEEEC
Confidence 6789999999999999999986
No 151
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=27.74 E-value=1.4e+02 Score=33.80 Aligned_cols=22 Identities=18% Similarity=0.244 Sum_probs=20.4
Q ss_pred CcEEEEEEcCCceEEEEEEEEE
Q psy7891 218 PVHVMFYDMGAWSTTVSIVSYQ 239 (929)
Q Consensus 218 ~~~vlv~D~GggT~dvsvv~~~ 239 (929)
...+|.+|+||.++-+.+|.+.
T Consensus 79 ~G~~LalDlGGTn~Rv~~V~l~ 100 (485)
T 3o8m_A 79 TGDFLALDLGGTNLRVVLVKLG 100 (485)
T ss_dssp EEEEEEEEESSSEEEEEEEEEE
T ss_pred ceEEEEEEecCCeEEEEEEEEC
Confidence 5789999999999999999986
No 152
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=27.30 E-value=58 Score=34.22 Aligned_cols=45 Identities=18% Similarity=0.188 Sum_probs=36.8
Q ss_pred HHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhC
Q psy7891 348 DLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVG 395 (929)
Q Consensus 348 ~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~ 395 (929)
.....+...++++|+++++++++|+.|++.|+++++ -+.+.+.||
T Consensus 209 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 253 (313)
T 1zow_A 209 FAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERLG 253 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhC
Confidence 345577788999999999999999999999998754 345677787
No 153
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=27.09 E-value=5.3e+02 Score=26.52 Aligned_cols=48 Identities=17% Similarity=0.223 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceeHHHHHHHHHHHHHHH
Q psy7891 800 LKSLDTLINETKVWKEKSEKEQNQLKKSDPIVLTIRSIVEKIRALEREV 848 (929)
Q Consensus 800 ~~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 848 (929)
+..+...+.+...|+.++.......+ .-+.+-.+..+..|.+.+.+.+
T Consensus 112 l~~f~~~~~~l~~Wl~~~e~~l~~~~-~g~d~~~v~~l~~~~~~f~~el 159 (326)
T 3kbt_A 112 LFQLKRETDDLEQWISEKELVASSPE-MGQDFDHVTLLRDKFRDFARET 159 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCC-CCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccc-CCCCHHHHHHHHHHHHHHHHHH
Confidence 44566778888999988766444322 2222333444444444444433
No 154
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=26.16 E-value=34 Score=35.97 Aligned_cols=64 Identities=13% Similarity=0.042 Sum_probs=39.9
Q ss_pred HHHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcC--CHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHHH
Q psy7891 345 LNEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTR--VPKVQEKITKVVGVELSKNLNTDEAAALGAVYKAA 417 (929)
Q Consensus 345 l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sr--iP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~aa 417 (929)
.+..++++....+-..+...-. . +.+.|+|.||.++ .|++.+.+.+.+ . .++.+.++||+++|.
T Consensus 227 ~A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i----~---~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 227 EADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL----V---APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC----C---CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc----c---CCCCCHHHHHHHHHh
Confidence 3445566655555555554322 2 5667888888764 566766676653 1 145678899998864
No 155
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=25.60 E-value=40 Score=35.03 Aligned_cols=19 Identities=16% Similarity=0.443 Sum_probs=17.5
Q ss_pred EEEEEcCccceEEEEEECC
Q psy7891 27 VMSVDLGSEWMKVAIVSPG 45 (929)
Q Consensus 27 vvGID~GTt~s~va~~~~g 45 (929)
++.||.|+|++++|++..+
T Consensus 2 lL~IDIGNT~ik~gl~~~~ 20 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEG 20 (268)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEECcCcEEEEEEECC
Confidence 6899999999999999866
No 156
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=25.05 E-value=73 Score=33.83 Aligned_cols=44 Identities=11% Similarity=0.172 Sum_probs=36.5
Q ss_pred HHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhC
Q psy7891 349 LFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVG 395 (929)
Q Consensus 349 l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~ 395 (929)
....+...|+++|+++++++++|+.|++.++++++ -+.+.+.||
T Consensus 222 ~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 265 (331)
T 2x3e_A 222 AVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQLD 265 (331)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 45567788999999999999999999999998764 345777787
No 157
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=24.98 E-value=48 Score=34.80 Aligned_cols=56 Identities=16% Similarity=0.013 Sum_probs=34.5
Q ss_pred ceEEEEecCCCCHHHHHHHHHHHHHc--CCcEEEEechhHHHHHHhcccccccCCCCCCcEEEEEEcCCceE
Q psy7891 162 NEAVIIVPGYFNQIERQSMLKAGELA--GLKVLQLMNDYTAVALNYGIFKRKDFNETNPVHVMFYDMGAWST 231 (929)
Q Consensus 162 ~~~VItVPa~f~~~qR~al~~Aa~~A--Gl~~~~li~EptAAAl~y~~~~~~~~~~~~~~~vlv~D~GggT~ 231 (929)
..+.|++|...+......+.. .. +++ +.+.|+..||+++-. . ....+++=+|.|..
T Consensus 77 ~~igig~pG~v~~~~~~~l~~---~~~~~~p-v~v~NDa~aaa~ge~--~--------~~~~v~v~~GTGig 134 (305)
T 1zc6_A 77 CAIGLGLSGVHNRQWAGEFES---QAPGFAR-LSLATDGYTTLLGAH--G--------GQPGIIVALGTGSI 134 (305)
T ss_dssp EEEEEEESCCCTTSHHHHHHH---TCCCCSE-EEEECHHHHHHHHHT--T--------TSSEEEEEESSSEE
T ss_pred ceEEEEecCCCchHHHHHHHH---hCCCCce-EEEECCHHHHHHhhc--C--------CCCeEEEEecCCeE
Confidence 467899998876543333322 22 444 589999999887641 1 22345566788864
No 158
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=24.79 E-value=56 Score=27.55 Aligned_cols=28 Identities=21% Similarity=0.284 Sum_probs=25.4
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCcE
Q psy7891 164 AVIIVPGYFNQIERQSMLKAGELAGLKV 191 (929)
Q Consensus 164 ~VItVPa~f~~~qR~al~~Aa~~AGl~~ 191 (929)
-.++.|+.++..+|..+...|+..||.-
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 4789999999999999999999999864
No 159
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=24.58 E-value=92 Score=33.30 Aligned_cols=45 Identities=13% Similarity=0.168 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEEcCCc--CCHHHHHHHHHHhCC
Q psy7891 352 RVGYPVEQALKSSAVPMDVISQVILVGAGT--RVPKVQEKITKVVGV 396 (929)
Q Consensus 352 ~i~~~i~~~L~~a~~~~~~I~~ViLvGG~s--riP~v~~~l~~~f~~ 396 (929)
-.....+++|+++++++++|+.|+++.-+. .+|..--.|.+.+|.
T Consensus 65 la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl 111 (350)
T 4ewp_A 65 MAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGA 111 (350)
T ss_dssp HHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCC
Confidence 345678899999999999999988876553 579999999999983
No 160
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=24.22 E-value=1e+02 Score=34.07 Aligned_cols=45 Identities=22% Similarity=0.290 Sum_probs=36.6
Q ss_pred ccceEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEechhHH-HHHHhccc
Q psy7891 160 VINEAVIIVPGYFNQIERQSMLKAGELAGLKVLQLMNDYTA-VALNYGIF 208 (929)
Q Consensus 160 ~v~~~VItVPa~f~~~qR~al~~Aa~~AGl~~~~li~EptA-AAl~y~~~ 208 (929)
.+.++|++.|+.-+ -.++-||.++|.+.+.-+--..| ||++||..
T Consensus 153 GV~~Iv~~tPp~i~----p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTe 198 (434)
T 1kae_A 153 GCKKVVLCSPPPIA----DEILYAAQLCGVQDVFNVGGAQAIAALAFGTE 198 (434)
T ss_dssp TCSEEEEEECSSCC----HHHHHHHHHTTCCEEEECCHHHHHHHHHHCCS
T ss_pred CCCeEEEECCCCCC----HHHHHHHHHcCCCEEeecccHHHHHHHHcCCC
Confidence 47899999998222 46889999999998888888877 57899965
No 161
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=23.89 E-value=20 Score=37.61 Aligned_cols=45 Identities=11% Similarity=0.073 Sum_probs=28.0
Q ss_pred ccceEEEEecCCCCHHHHHHHHHHHH-HcCC-cEEEEechhHHHHHHh
Q psy7891 160 VINEAVIIVPGYFNQIERQSMLKAGE-LAGL-KVLQLMNDYTAVALNY 205 (929)
Q Consensus 160 ~v~~~VItVPa~f~~~qR~al~~Aa~-~AGl-~~~~li~EptAAAl~y 205 (929)
.+..+.|++|..- ......+.+..+ ..++ ..+.+.|+..|||++-
T Consensus 59 ~i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge 105 (291)
T 1zbs_A 59 SIRAVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARAL 105 (291)
T ss_dssp TCCEEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHH
T ss_pred cccEEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhh
Confidence 4566788888864 221223444333 3465 3678999999999864
No 162
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=23.08 E-value=1.3e+02 Score=31.56 Aligned_cols=48 Identities=15% Similarity=0.173 Sum_probs=31.2
Q ss_pred CccEEEEEcCCcCCH----HHHHHHHHHhCC-------------ccCCCCCchHHHHhhHHHHHH
Q psy7891 370 VISQVILVGAGTRVP----KVQEKITKVVGV-------------ELSKNLNTDEAAALGAVYKAA 417 (929)
Q Consensus 370 ~I~~ViLvGG~sriP----~v~~~l~~~f~~-------------~i~~~~n~deaVA~GAa~~aa 417 (929)
+.+.|+|-||.++.+ .|++.+.+.... .+...--.+.|.++|||+++.
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~ 288 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAH 288 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHH
Confidence 456788888888754 455555555321 123344467899999998875
No 163
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=22.81 E-value=8e+02 Score=27.11 Aligned_cols=52 Identities=2% Similarity=-0.017 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhc--CCCCCcceeHHHHHHHHHHHHHHHH
Q psy7891 798 IELKSLDTLINETKVWKEKSEKEQNQL--KKSDPIVLTIRSIVEKIRALEREVR 849 (929)
Q Consensus 798 ~e~~~l~~~~~~~~~Wl~~~~~~q~~~--~~~~dP~~~~~di~~k~~~l~~~~~ 849 (929)
.+...+...++++++||.++...-... +-..+..-.+..+..|...+++.+.
T Consensus 199 ~~~~QF~~Da~EaesWL~eke~~l~s~y~~D~g~d~~~~e~LLkkh~~le~~l~ 252 (450)
T 3r6n_A 199 AAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKNMPLQHLLEQIKELEKEREKIL 252 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHhcccccCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356678888999999999876655543 1223344444555555555544433
No 164
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=22.28 E-value=1.4e+02 Score=30.36 Aligned_cols=74 Identities=12% Similarity=0.058 Sum_probs=35.3
Q ss_pred HHHHHHHHhhHHHHHHHHHhhhch--hhhc---cCCChhHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHhchhh
Q psy7891 673 KVRKEKALNSLESLLFDAKSKLEL--EEYS---SVAAPNESKTIVDKIDEITNWLEEDGWNAEADVLENKLNEINSLVVP 747 (929)
Q Consensus 673 ~~~~~eakN~LEs~iy~~r~~L~~--~~~~---~~~~~~er~~l~~~l~e~~~WL~~d~~~a~~~~~~~kl~eL~~~~~p 747 (929)
....++.|..|+.|+-++|.++.. +++. .-..++-|..+...++++.+=|.-- -+.=+..+..++++|+....|
T Consensus 109 ~~~~eelr~~L~P~~eel~~~~~~~~eel~~~L~p~~eelr~kl~~~veelk~~l~P~-~ee~r~kl~~~~~el~~~l~p 187 (243)
T 2a01_A 109 QEEMELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLAPY-SDELRQRLAARLEALKENGGA 187 (243)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHCCSCCSSTHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHhcch
Confidence 334455666666666666665532 2222 2334455666666666666655310 001122344444555554444
No 165
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=22.22 E-value=5.3e+02 Score=28.59 Aligned_cols=49 Identities=12% Similarity=0.133 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceeHHHHHHHHHHHHHHH
Q psy7891 799 ELKSLDTLINETKVWKEKSEKEQNQLKKSDPIVLTIRSIVEKIRALEREV 848 (929)
Q Consensus 799 e~~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 848 (929)
.+..+...+.+...|++++...-.... +-+....+.-+..|.+.|++++
T Consensus 94 ~L~qFl~d~~ee~~Wi~EKe~~~~s~d-~gd~l~dv~~l~~khq~l~~EL 142 (450)
T 3r6n_A 94 QLQNIIQATSREIMWINDCEEEELLYD-WSDKNTNIAQKQEAFSIRMSQL 142 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCC-CSTTCCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc-cCcChhhHHHHHHHHHHHHHHH
Confidence 355666677777777777665443322 2222233334445555555444
No 166
>1d7m_A Cortexillin I; coiled-coil, coiled-coil trigger site, alpha helix, dimeriza contractIle protein; 2.70A {Dictyostelium discoideum} SCOP: h.1.10.1
Probab=22.02 E-value=1.4e+02 Score=24.86 Aligned_cols=60 Identities=22% Similarity=0.338 Sum_probs=41.4
Q ss_pred HHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHhchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHH
Q psy7891 712 VDKIDEITNWLEEDGWNAEADVLENKLNEINSLVVPIWERHREHQERPEALKSLNNALNVSVTFY 776 (929)
Q Consensus 712 ~~~l~e~~~WL~~d~~~a~~~~~~~kl~eL~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~ 776 (929)
.+.|.-.+.-|. |+..+.+++.++.++|+++...+.. +...|..-+..++..|..+-.-+
T Consensus 3 an~La~le~sLe--~EK~S~eeL~kQk~eL~~~l~~l~~---e~~~R~~~i~el~akidd~Lk~l 62 (101)
T 1d7m_A 3 ANRLAGLENSLE--SEKVSREQLIKQKDQLNSLLASLES---EGAEREKRLRELEAKLDETLKNL 62 (101)
T ss_dssp HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhh--hhhccHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcc
Confidence 344555555564 4566778888888888888887664 66777777777777777665443
No 167
>3iee_A Putative exported protein; YP_212931.1, hypothetical protein BF3319 from bacteroides FR structural genomics; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343}
Probab=21.84 E-value=6.5e+02 Score=25.66 Aligned_cols=95 Identities=13% Similarity=0.147 Sum_probs=60.5
Q ss_pred hHHHHHHHHHHHHHHhhhhc--CCCCCHHHHHHHHHHHHhchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhccc
Q psy7891 706 NESKTIVDKIDEITNWLEED--GWNAEADVLENKLNEINSLVVPIWERHREHQERPEALKSLNNALNVSVTFYNSIKNLS 783 (929)
Q Consensus 706 ~er~~l~~~l~e~~~WL~~d--~~~a~~~~~~~kl~eL~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~~~~~~ 783 (929)
++.=.-++++..+...|+.- ....+...+..++.+|+...+ +..|+---..-|.....++..+..+..|+..++..-
T Consensus 170 eqIla~kkm~~~~q~ii~l~~rk~~~D~~~l~~~~~eLek~l~-~a~Klp~~~~~~~~~~~Y~~Flk~ve~Fl~~lrk~r 248 (270)
T 3iee_A 170 AQIMSVRKMSSTMQSILNLYARKHRMDGPRIDLKVAELTKQLD-AAKKLPVVNGHEGEMKSYQAFLSQVETFIKQVKKVR 248 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTSCCHHHHHHHHHHHHHHHH-HHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH-HhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334445555555555421 124456667788888887777 344443344468888888888888888888887632
Q ss_pred cCcCCcccCCCCCHHHHHHHHHHHH
Q psy7891 784 LNTNETEDLNLFSDIELKSLDTLIN 808 (929)
Q Consensus 784 ~~~~~~~~~~~~t~~e~~~l~~~~~ 808 (929)
+. ..|++.+...|.+.++
T Consensus 249 ~~-------g~yse~d~~~L~s~Y~ 266 (270)
T 3iee_A 249 EK-------GEYSDADYDMLTSAFE 266 (270)
T ss_dssp TS-------SSCCHHHHHHHHHHHH
T ss_pred hc-------CCCcHHHHHHHHHHhh
Confidence 22 4688888888876654
No 168
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=21.82 E-value=38 Score=35.42 Aligned_cols=68 Identities=7% Similarity=-0.133 Sum_probs=37.0
Q ss_pred HHHHHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhCCccCCCCCchHHHHhhHHHHHH
Q psy7891 346 NEDLFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVGVELSKNLNTDEAAALGAVYKAA 417 (929)
Q Consensus 346 ~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~~~i~~~~n~deaVA~GAa~~aa 417 (929)
+..++++....+-..+ ...+ ..+.+.|+|.||-++. +.+.|++.+.........+..+.+.||++++.
T Consensus 210 A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 210 IRQLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQTGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp TTHHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTTTTCCEEEECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhcCCcEEeecCCCHHHHHHHHHH
Confidence 3445555555555544 2222 1145678888887765 55666666653111111244677889987653
No 169
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=21.38 E-value=90 Score=34.34 Aligned_cols=49 Identities=22% Similarity=0.266 Sum_probs=37.4
Q ss_pred ccceEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEechhHH-HHHHhcccc
Q psy7891 160 VINEAVIIVPGYFNQIERQSMLKAGELAGLKVLQLMNDYTA-VALNYGIFK 209 (929)
Q Consensus 160 ~v~~~VItVPa~f~~~qR~al~~Aa~~AGl~~~~li~EptA-AAl~y~~~~ 209 (929)
.|.++|++.|+. +-.---+++-||.++|.+.+.-+--..| ||++||...
T Consensus 159 GV~~Iv~~tPp~-~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTet 208 (423)
T 4gic_A 159 GVPELIMAVPAP-RGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTET 208 (423)
T ss_dssp TCSEEEEECCCG-GGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSS
T ss_pred CCCeEEEecCCC-CCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCc
Confidence 367899999983 2222347899999999998888888777 578999754
No 170
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=21.26 E-value=5e+02 Score=25.07 Aligned_cols=23 Identities=13% Similarity=-0.019 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q psy7891 799 ELKSLDTLINETKVWKEKSEKEQ 821 (929)
Q Consensus 799 e~~~l~~~~~~~~~Wl~~~~~~q 821 (929)
++..+...++++..|+.++....
T Consensus 109 ~~~~F~~~~~e~~~Wl~ek~~~l 131 (218)
T 3edu_A 109 DLHRYFYTGAEILGLIDEKHREL 131 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Confidence 56778889999999999866543
No 171
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=20.39 E-value=83 Score=33.30 Aligned_cols=44 Identities=20% Similarity=0.217 Sum_probs=36.1
Q ss_pred HHhHHHHHHHHHHHHcCCCCCCccEEEEEcCCcCCHHHHHHHHHHhC
Q psy7891 349 LFDRVGYPVEQALKSSAVPMDVISQVILVGAGTRVPKVQEKITKVVG 395 (929)
Q Consensus 349 l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f~ 395 (929)
....+...++++|++++++++||+.|++.++++++ -+.+.+.||
T Consensus 230 ~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~---~~~~~~~lg 273 (335)
T 1u6e_A 230 AAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRI---NELLVKNLQ 273 (335)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHcC
Confidence 35577788999999999999999999999998765 344667777
No 172
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=20.31 E-value=2.3e+02 Score=31.61 Aligned_cols=22 Identities=18% Similarity=0.150 Sum_probs=20.1
Q ss_pred CcEEEEEEcCCceEEEEEEEEE
Q psy7891 218 PVHVMFYDMGAWSTTVSIVSYQ 239 (929)
Q Consensus 218 ~~~vlv~D~GggT~dvsvv~~~ 239 (929)
...++.+|+||.++-+.+|...
T Consensus 60 ~G~~laiDlGGTnirv~lV~~~ 81 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILISLA 81 (457)
T ss_dssp CEEEEEEEECSSEEEEEEEEEE
T ss_pred cceEEEEEeCCCeEEEEEEEeC
Confidence 6788999999999999999976
No 173
>2ra1_A Surface layer protein; triple coiled-coil, S-layer protein, protein binding, sugar protein; 2.41A {Geobacillus stearothermophilus}
Probab=20.11 E-value=1.4e+02 Score=32.13 Aligned_cols=122 Identities=7% Similarity=0.033 Sum_probs=72.4
Q ss_pred HHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHhchhhHHHHHHhhhcchHHHHHHHHHHHHHHH----HHHHhhccccCc
Q psy7891 711 IVDKIDEITNWLEEDGWNAEADVLENKLNEINSLVVPIWERHREHQERPEALKSLNNALNVSVT----FYNSIKNLSLNT 786 (929)
Q Consensus 711 l~~~l~e~~~WL~~d~~~a~~~~~~~kl~eL~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~----~~~~~~~~~~~~ 786 (929)
|..+-.+++.-|.+..-+...+-|.+-.-+|+.-.- |+.|++....|...++.|+.--...+. .+.-+..+.+..
T Consensus 103 l~~~~~eL~~ai~~~dl~~a~~~YHklsyeikk~av-ll~RVYG~stRe~il~~fk~pA~~l~~~~~y~Itv~~~~~~~~ 181 (412)
T 2ra1_A 103 LDKMRQELKAAVDAKDLKKAEELYHKISYELKTRTV-ILDRVYGQSTRELLRSTFKADAQALRDRLIYDITVAMKAREAQ 181 (412)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTH-HHHTSSCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccHHHHHHHhhhhhHhhhhcEE-EEecccChhHHHHHHHHhhchHHHHHHHhhhHHHHHHHHHHHH
Confidence 333334444445432122234556666677887766 899999999999999998873222222 111111111110
Q ss_pred CCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceeHHHHHHHHHHHHHHHHHH
Q psy7891 787 NETEDLNLFSDIELKSLDTLINETKVWKEKSEKEQNQLKKSDPIVLTIRSIVEKIRALEREVRYL 851 (929)
Q Consensus 787 ~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~i 851 (929)
.-+.+.++......+++...||. +-.|- ..++|.++.+...+.+...
T Consensus 182 ------~a~~~g~l~~a~~~l~~v~~~l~----------kv~d~--FkaeL~~aa~~a~~aYeaa 228 (412)
T 2ra1_A 182 ------DAVKAGNLDKAKAALDQVNQYVS----------KVTDA--FKAELQKAAQDAKAAYEAA 228 (412)
T ss_dssp ------HHHHTTCHHHHHHHHHHHHHHGG----------GCCST--THHHHHHHHHHHHHHHHHH
T ss_pred ------HHhccCcHHHHHHHHHHHHHHHH----------hhhHH--HHHHHHHhhhhhhhhhccc
Confidence 12333557778888999999983 33344 5678888888877666655
Done!