Query psy7893
Match_columns 691
No_of_seqs 246 out of 1594
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 21:31:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7893.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7893hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 100.0 2E-80 6.9E-85 687.3 22.0 378 23-659 1-422 (427)
2 3qb0_A Actin-related protein 4 100.0 8.5E-77 2.9E-81 666.1 31.7 362 25-658 21-497 (498)
3 2fxu_A Alpha-actin-1, actin, a 100.0 7E-71 2.4E-75 601.7 31.2 369 25-659 3-375 (375)
4 4fo0_A Actin-related protein 8 100.0 8.2E-72 2.8E-76 642.6 23.6 441 27-659 15-590 (593)
5 1k8k_B ARP2, actin-like protei 100.0 4.6E-72 1.6E-76 615.2 14.9 366 25-656 4-388 (394)
6 1k8k_A ARP3, actin-like protei 100.0 3.6E-67 1.2E-71 579.7 29.9 384 23-659 1-413 (418)
7 4am6_A Actin-like protein ARP8 100.0 7.1E-58 2.4E-62 517.3 23.2 217 25-264 38-347 (655)
8 1jce_A ROD shape-determining p 100.0 5.5E-32 1.9E-36 290.5 21.7 208 28-266 4-216 (344)
9 3h1q_A Ethanolamine utilizatio 99.8 2.3E-19 7.9E-24 185.7 21.0 155 27-238 28-183 (272)
10 2v7y_A Chaperone protein DNAK; 99.8 2.5E-19 8.7E-24 202.6 11.4 184 28-239 3-211 (509)
11 1dkg_D Molecular chaperone DNA 99.7 2.4E-18 8.2E-23 186.9 10.1 185 28-240 3-243 (383)
12 3qfu_A 78 kDa glucose-regulate 99.7 2.2E-17 7.4E-22 179.6 14.8 184 27-239 18-256 (394)
13 3i33_A Heat shock-related 70 k 99.7 3.8E-16 1.3E-20 170.7 13.6 188 26-239 22-264 (404)
14 2kho_A Heat shock protein 70; 99.4 3E-12 1E-16 147.6 20.5 184 28-239 3-242 (605)
15 1yuw_A Heat shock cognate 71 k 99.4 2.6E-12 9E-17 146.6 17.3 183 28-238 5-242 (554)
16 3d2f_A Heat shock protein homo 99.3 9.2E-11 3.2E-15 136.7 22.1 187 28-238 3-246 (675)
17 4gni_A Putative heat shock pro 99.3 3.1E-11 1.1E-15 132.1 16.9 121 100-240 129-256 (409)
18 2ych_A Competence protein PILM 99.3 5.3E-11 1.8E-15 128.6 18.5 96 143-264 157-252 (377)
19 4b9q_A Chaperone protein DNAK; 99.1 2.7E-09 9.1E-14 123.0 22.3 184 28-239 3-242 (605)
20 2fsj_A Hypothetical protein TA 99.1 4.6E-10 1.6E-14 120.7 14.2 185 28-241 22-241 (346)
21 4a2a_A Cell division protein F 99.1 6.3E-09 2.2E-13 114.7 22.6 91 145-263 176-266 (419)
22 4apw_A ALP12; actin-like prote 98.8 1.8E-08 6.1E-13 107.6 12.0 185 27-242 7-223 (329)
23 2zgy_A Plasmid segregation pro 98.2 6.1E-06 2.1E-10 87.2 11.4 75 148-239 137-212 (320)
24 3js6_A Uncharacterized PARM pr 98.2 2.5E-05 8.5E-10 84.1 16.1 196 28-241 5-233 (355)
25 2d0o_A DIOL dehydratase-reacti 97.5 0.001 3.4E-08 74.3 15.1 98 138-263 370-467 (610)
26 1nbw_A Glycerol dehydratase re 97.3 0.00078 2.7E-08 75.4 11.3 78 158-263 392-469 (607)
27 1t6c_A Exopolyphosphatase; alp 95.0 0.17 5.8E-06 53.2 12.3 79 136-233 97-177 (315)
28 3cer_A Possible exopolyphospha 94.1 0.16 5.5E-06 54.0 9.8 84 136-233 102-191 (343)
29 3mdq_A Exopolyphosphatase; str 94.1 0.28 9.7E-06 51.4 11.6 80 136-233 89-170 (315)
30 3hi0_A Putative exopolyphospha 93.7 0.61 2.1E-05 52.3 14.0 77 136-232 100-178 (508)
31 1u6z_A Exopolyphosphatase; alp 93.5 0.31 1.1E-05 54.7 11.3 160 27-233 11-176 (513)
32 4ehu_A Activator of 2-hydroxyi 92.2 0.035 1.2E-06 56.7 0.9 67 556-632 187-253 (276)
33 2ews_A Pantothenate kinase; PA 79.0 0.88 3E-05 47.2 2.6 71 556-631 214-286 (287)
34 2zgy_A Plasmid segregation pro 78.5 0.61 2.1E-05 48.6 1.2 47 578-631 273-319 (320)
35 3djc_A Type III pantothenate k 78.1 37 0.0013 34.4 14.5 19 29-47 4-22 (266)
36 3cet_A Conserved archaeal prot 78.0 1.5 5.1E-05 46.3 4.0 25 192-216 127-151 (334)
37 2h3g_X Biosynthetic protein; p 77.3 28 0.00094 35.4 13.3 18 30-47 3-20 (268)
38 1hux_A Activator of (R)-2-hydr 68.7 1.4 4.8E-05 44.9 1.1 48 578-633 209-256 (270)
39 2i7n_A Pantothenate kinase 1; 64.9 3.5 0.00012 44.0 3.2 74 556-631 283-358 (360)
40 3js6_A Uncharacterized PARM pr 57.3 1.1 3.7E-05 47.8 -2.4 46 576-633 289-336 (355)
41 3bex_A Type III pantothenate k 56.2 1.6E+02 0.0055 29.2 14.5 23 192-215 122-144 (249)
42 2fsj_A Hypothetical protein TA 53.7 3.4 0.00011 43.6 0.7 48 577-632 296-343 (346)
43 2qm1_A Glucokinase; alpha-beta 53.6 1.2E+02 0.0041 30.6 12.6 68 558-632 250-320 (326)
44 4htl_A Beta-glucoside kinase; 48.4 9.3 0.00032 39.0 3.1 66 558-632 225-290 (297)
45 4ehu_A Activator of 2-hydroxyi 48.2 81 0.0028 31.3 10.1 50 192-241 93-144 (276)
46 2aa4_A Mannac kinase, putative 45.4 7.3 0.00025 39.4 1.6 66 558-631 221-286 (289)
47 3aap_A Ectonucleoside triphosp 43.1 15 0.00052 38.9 3.7 37 192-228 140-178 (353)
48 4db3_A Glcnac kinase, N-acetyl 40.7 17 0.00058 37.7 3.6 68 558-632 257-325 (327)
49 4fo0_A Actin-related protein 8 37.4 17 0.00057 40.9 3.1 59 497-555 308-371 (593)
50 2hoe_A N-acetylglucosamine kin 37.1 16 0.00054 38.7 2.7 68 558-632 302-370 (380)
51 2gup_A ROK family protein; sug 37.0 8.8 0.0003 38.8 0.7 68 558-632 215-286 (292)
52 2yhw_A Bifunctional UDP-N-acet 36.6 1.2E+02 0.0041 31.1 9.5 65 558-632 272-337 (343)
53 1hux_A Activator of (R)-2-hydr 36.5 1.8E+02 0.006 29.0 10.4 24 192-215 96-119 (270)
54 2qm1_A Glucokinase; alpha-beta 35.9 11 0.00036 38.8 1.1 60 141-217 100-159 (326)
55 1z6r_A MLC protein; transcript 31.8 4.1E+02 0.014 27.7 12.9 130 29-216 87-236 (406)
56 4db3_A Glcnac kinase, N-acetyl 30.6 4E+02 0.014 27.0 12.3 60 141-217 112-171 (327)
57 3r8e_A Hypothetical sugar kina 30.3 17 0.0006 37.4 1.6 67 558-631 248-317 (321)
58 2ch5_A NAGK protein; transfera 30.0 39 0.0013 34.8 4.3 75 557-632 244-323 (347)
59 3vgl_A Glucokinase; ROK family 29.9 22 0.00076 36.6 2.3 68 558-632 240-311 (321)
60 3vov_A Glucokinase, hexokinase 29.7 21 0.00073 36.4 2.2 68 558-632 225-294 (302)
61 2yhx_A Hexokinase B; transfera 25.7 46 0.0016 36.5 4.0 51 580-633 386-442 (457)
62 2ch5_A NAGK protein; transfera 25.6 5.3E+02 0.018 26.0 15.0 82 99-205 49-134 (347)
63 1zbs_A Hypothetical protein PG 25.6 5E+02 0.017 25.7 14.1 70 124-215 62-132 (291)
64 3epq_A Putative fructokinase; 25.0 35 0.0012 34.9 2.8 68 558-632 212-288 (302)
65 1zc6_A Probable N-acetylglucos 24.6 5.3E+02 0.018 25.6 13.7 131 28-214 12-144 (305)
66 1saz_A Probable butyrate kinas 23.5 49 0.0017 35.1 3.6 89 558-657 281-377 (381)
67 2ap1_A Putative regulator prot 22.8 21 0.0007 36.7 0.5 67 558-631 257-324 (327)
68 2hoe_A N-acetylglucosamine kin 22.4 5E+02 0.017 26.9 11.4 58 141-217 180-237 (380)
69 1bdg_A Hexokinase; phosphotran 21.2 45 0.0015 36.4 2.8 50 581-633 396-446 (451)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-80 Score=687.33 Aligned_cols=378 Identities=21% Similarity=0.377 Sum_probs=313.9
Q ss_pred cCCCCceEEEEcCCceEEEEEeCCCCCcEEEecceeecccCC-------------------------CCcCCcceecccc
Q psy7893 23 LRDSSLPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKER-------------------------GKKDGETQVGNDI 77 (691)
Q Consensus 23 ~~~~~~~vVID~GS~~~KaG~age~~P~~viPs~vg~~~~~~-------------------------~~~~~~~~vG~ea 77 (691)
|+.+.++|||||||++|||||||++.|+++|||+||+++... +..+.+++||+++
T Consensus 1 m~~~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea 80 (427)
T 3dwl_A 1 MASFNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDA 80 (427)
T ss_dssp --CCCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHH
T ss_pred CCCCCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHH
Confidence 444678999999999999999999999999999999987530 1112356999999
Q ss_pred ccccccccEEecccccCcccCHHHHHHHHHHHH-hhcCCCCCCCCCccEEEEecCCCchHHHHHHHHHHHHhcCCCeEee
Q psy7893 78 SNIEAVRFQLKTQFDKNVVTHYDIQEQIFDYAF-SHLSINTEGNVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCY 156 (691)
Q Consensus 78 ~~~~~~~~~l~~Pi~~G~I~nwd~~e~iw~~~f-~~L~i~~~~~~~~pvLltEp~~~~~~~re~l~EilFE~f~vp~v~~ 156 (691)
..+....+.+++||++|+|+|||.+|.||+|+| +.|++++. +||||||||+++++..|++++|++||+||||++++
T Consensus 81 ~~~~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~---~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l 157 (427)
T 3dwl_A 81 LKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPE---DHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYI 157 (427)
T ss_dssp HHTHHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGG---GCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEE
T ss_pred hhCcccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCc---CCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeee
Confidence 877653588999999999999999999999998 57998886 89999999999999999999999999999999999
Q ss_pred chhhHHhhhhccCCCCCCccccccccccccCCCC-CceEEEEEeCCceEEEEEeecCeecccCeEEeeccHHHHHHHHHH
Q psy7893 157 GIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWE-GQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHK 235 (691)
Q Consensus 157 ~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~-~~sgLVVDiG~~~T~IvPV~dG~vl~~a~~ri~iGG~~lt~yL~~ 235 (691)
+.+++||+|++ |.. ..+.. .++|||||+|+++|||+||++|+++.++++|+++||+++|+||++
T Consensus 158 ~~~~vla~~a~------G~~---------~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~ 222 (427)
T 3dwl_A 158 AVQAVLALAAS------WTS---------SKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQS 222 (427)
T ss_dssp EEHHHHHHHGG------GGS---------TTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHH
T ss_pred cchHHHHHHhc------CCc---------ccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHH
Confidence 99999999999 630 00000 289999999999999999999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHHHheeeeccHHHHHHhhhhcccccccccccccCccCCCCCCchHHHHHHHHHHHHHHH
Q psy7893 236 LLQLKYPSHINSITPSRSEELLWDYGFVATDYREHLRKWLDAEFYDSNVVKVQLPYAVPVPNLTTEQQKDRRKELAKKLV 315 (691)
Q Consensus 236 lL~~~~~~~~~~~~~~~~e~IKe~~cyva~dy~~el~~~~~~~~~~~~~~~~qlp~~~~~~~~~~~~~~~~~~~~~~~l~ 315 (691)
+|+.+++. .....++++|||++|||+.||.+++..+...
T Consensus 223 lL~~~~~~---~~~~~~~~~IKe~~cyv~~d~~~e~~~~~~~-------------------------------------- 261 (427)
T 3dwl_A 223 LLRDRNEP---DSSLKTAERIKEECCYVCPDIVKEFSRFDRE-------------------------------------- 261 (427)
T ss_dssp TTC-----------CHHHHHHHHHHCCCCSCHHHHHHHTTC---------------------------------------
T ss_pred HHHHcCCC---chhHHHHHHHHHhcCcccCCHHHHHHHhhcC--------------------------------------
Confidence 99988764 4456789999999999999987765431100
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHHHhcCCCChhhHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHhhcCCCCCC
Q psy7893 316 EMNAKKREERLVDDERHLNELLELREIVELTPSDHSHAREAFKSMGINNIQDLNKSINQLQQKIEKTKAKIIAYNNGEDL 395 (691)
Q Consensus 316 ~~~~~kr~~~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~i~~~~~~~~k~~~k~~~~~~~~~l 395 (691)
..
T Consensus 262 --------------------------------------------------------------------------~~---- 263 (427)
T 3dwl_A 262 --------------------------------------------------------------------------PD---- 263 (427)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------cc----
Confidence 00
Q ss_pred CchhhhhhhhhhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCCCCCCCC
Q psy7893 396 TEEPKAKLSKEIAVPESEAEFKAWLIETKKKRAYIIDKKNARKQRRQDLAKRRTAAAQERMRLISELARKEKRDDDFGMR 475 (691)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~k~~~r~~~~~~~~~~~s~~~q~r~~~~~~l~~~~~~~d~~~~~ 475 (691)
. ...|.+.
T Consensus 264 ---------------------------------~---------------------------------------~~~~~l~ 271 (427)
T 3dwl_A 264 ---------------------------------R---------------------------------------YLKYASE 271 (427)
T ss_dssp --------------------------------------------------------------------------CCBCC-
T ss_pred ---------------------------------c---------------------------------------cceeEee
Confidence 0 0011110
Q ss_pred CcchhhhhhhccCCCCCChHHHHHHHHHHHHHHhhCCCCccccccccccCCCCC--cEEEecceeeeecccccCCCCCCC
Q psy7893 476 DEDWDVYKVINKDAGDTDSEEEQERLIELEEILRQHDPEFTSLNQEQELSPKEA--NQLHIGVERMCGPECLFQPSMLGS 553 (691)
Q Consensus 476 d~dw~~y~~~~~~~~~~~~~~~~~~l~~~~~~l~~~dp~~~~~~~~~~~~~~~~--~~i~l~~Er~~~pE~LF~Ps~ig~ 553 (691)
.++| +.|.|+.|||+|||+||+|+++|.
T Consensus 272 --------------------------------------------------~~~g~~~~i~ig~erf~~pE~LF~P~~~g~ 301 (427)
T 3dwl_A 272 --------------------------------------------------SITGHSTTIDVGFERFLAPEIFFNPEIASS 301 (427)
T ss_dssp ----------------------------------------------------------CBCCTHHHHSGGGGTCGGGTCS
T ss_pred --------------------------------------------------CCCCCeeEEEEChHhhhChhhccCchhcCC
Confidence 0123 378999999999999999999999
Q ss_pred c-ccChHHHHHHHhccCCHHHHHHhhcCEEEeccCCCccchHHHHHHHHhhcC--------------CCCceeEEEeccC
Q psy7893 554 I-QAGISETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENR--------------PFQSHFSVSLAEN 618 (691)
Q Consensus 554 ~-~~Gl~e~i~~si~~~~~d~r~~L~~nI~LtGG~s~~~Gf~eRL~~EL~~l~--------------p~~~~i~V~~~~d 618 (691)
+ ..||+++|.++|.+||+|+|+.|++||+||||+|+||||.+||++||+.+. |...+|+|..+++
T Consensus 302 ~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~ 381 (427)
T 3dwl_A 302 DFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKR 381 (427)
T ss_dssp SCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTT
T ss_pred ccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCc
Confidence 9 599999999999999999999999999999999999999999999999997 4566799999999
Q ss_pred CccceeehhhhhcCccccccccccHHHHhhhchhhHhhcCC
Q psy7893 619 PELDAWSGARQFSLSENFHDFAVTQSDYQEKGGEFFRVHPC 659 (691)
Q Consensus 619 p~~~aW~Gasilas~~~f~~~~itk~eYeE~G~~~~~~k~~ 659 (691)
|.+++|+|||+||++++|+++||||+||+|+|++++++|+.
T Consensus 382 r~~s~WiGGSilasl~~f~~~witk~EYeE~G~~iv~~~~~ 422 (427)
T 3dwl_A 382 QRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGASIARRYQI 422 (427)
T ss_dssp CTTHHHHHHHHHHHSTTHHHHSEEHHHHHHSCGGGGSCCCC
T ss_pred cccceecCceeeccccchhheeEEHHHHhhhChHhheeccc
Confidence 99999999999999999999999999999999999998764
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.5e-77 Score=666.07 Aligned_cols=362 Identities=19% Similarity=0.307 Sum_probs=316.5
Q ss_pred CCCceEEEEcCCceEEEEEeCCCCCcEEEecceeecccCCCCcCCcceeccc-cccccccccEEecccccCcccCHHHHH
Q psy7893 25 DSSLPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKERGKKDGETQVGND-ISNIEAVRFQLKTQFDKNVVTHYDIQE 103 (691)
Q Consensus 25 ~~~~~vVID~GS~~~KaG~age~~P~~viPs~vg~~~~~~~~~~~~~~vG~e-a~~~~~~~~~l~~Pi~~G~I~nwd~~e 103 (691)
++..+||||+||++|||||+|++.|+++|||+||+++... ....+||++ +...++ .+.+++||++|+|+|||++|
T Consensus 21 de~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~---~~~~~vG~e~~~~~r~-~l~l~~Pi~~GvI~dwd~~E 96 (498)
T 3qb0_A 21 DEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADE---GNKKIFSEQSIGIPRK-DYELKPIIENGLVIDWDTAQ 96 (498)
T ss_dssp CCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCS---SCCEECCTTGGGSCCT-TEEEEESEETTEESCHHHHH
T ss_pred CCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCC---CccEEEecHHHhcCcC-ceEEeccCcCCEEccHHHHH
Confidence 5667999999999999999999999999999999987642 124589997 444433 48999999999999999999
Q ss_pred HHHHHHHh-hcCCCCCCCCCc-cEEEEecCCCchHHHHHHHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCccccccc
Q psy7893 104 QIFDYAFS-HLSINTEGNVNH-PIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGY 181 (691)
Q Consensus 104 ~iw~~~f~-~L~i~~~~~~~~-pvLltEp~~~~~~~re~l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~ 181 (691)
.||+|+|. .|++++. +| |||||||++++...|++|+|+|||.||||+++++.+++||+||+ |+
T Consensus 97 ~iw~~~f~~~L~v~p~---~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~------G~------ 161 (498)
T 3qb0_A 97 EQWQWALQNELYLNSN---SGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAA------GR------ 161 (498)
T ss_dssp HHHHHHHHHTSCCSCC---TTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHH------TC------
T ss_pred HHHHHHHHhhhCCCcc---cCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHc------CC------
Confidence 99999995 6999887 78 99999999999999999999999999999999999999999999 98
Q ss_pred cccccCCCCCceEEEEEeCCceEEEEEeecCeecccCeEEeeccHHHHHHHHHHHHhhhCC----------------CCC
Q psy7893 182 QVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHKLLQLKYP----------------SHI 245 (691)
Q Consensus 182 ~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~a~~ri~iGG~~lt~yL~~lL~~~~~----------------~~~ 245 (691)
++|||||+|++.|+|+||++|++++++++|+++||+++|+||+++|+.+.. .+.
T Consensus 162 ----------~tglVVDiG~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~ 231 (498)
T 3qb0_A 162 ----------PNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFD 231 (498)
T ss_dssp ----------SSEEEEEECSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCS
T ss_pred ----------CeEEEEEcCCCcEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCC
Confidence 899999999999999999999999999999999999999999999986421 111
Q ss_pred CCCC---------hHHHHHHHHHheeeecc--HHHHHHhhhhcccccccccccccCccCCCCCCchHHHHHHHHHHHHHH
Q psy7893 246 NSIT---------PSRSEELLWDYGFVATD--YREHLRKWLDAEFYDSNVVKVQLPYAVPVPNLTTEQQKDRRKELAKKL 314 (691)
Q Consensus 246 ~~~~---------~~~~e~IKe~~cyva~d--y~~el~~~~~~~~~~~~~~~~qlp~~~~~~~~~~~~~~~~~~~~~~~l 314 (691)
...+ ..++++|||++|||+.| |.++...
T Consensus 232 ~~~~~s~~~~~~~~~iv~~iKE~~c~Va~~~~~~~~~~~----------------------------------------- 270 (498)
T 3qb0_A 232 YEVDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTE----------------------------------------- 270 (498)
T ss_dssp SCCCHHHHHHHHHHTHHHHHHHHTCCCCSSCHHHHHHHH-----------------------------------------
T ss_pred CccCccHHHHHHHHHHHHHHHHhhEEecCCccHhHHhhh-----------------------------------------
Confidence 1111 23789999999999976 2211000
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHHHHhcCCCChhhHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHhhcCCCCC
Q psy7893 315 VEMNAKKREERLVDDERHLNELLELREIVELTPSDHSHAREAFKSMGINNIQDLNKSINQLQQKIEKTKAKIIAYNNGED 394 (691)
Q Consensus 315 ~~~~~~kr~~~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~i~~~~~~~~k~~~k~~~~~~~~~ 394 (691)
T Consensus 271 -------------------------------------------------------------------------------- 270 (498)
T 3qb0_A 271 -------------------------------------------------------------------------------- 270 (498)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCchhhhhhhhhhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCCCCCCC
Q psy7893 395 LTEEPKAKLSKEIAVPESEAEFKAWLIETKKKRAYIIDKKNARKQRRQDLAKRRTAAAQERMRLISELARKEKRDDDFGM 474 (691)
Q Consensus 395 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~k~~~r~~~~~~~~~~~s~~~q~r~~~~~~l~~~~~~~d~~~~ 474 (691)
. ..
T Consensus 271 -------------------------------------------------------------------~------~~---- 273 (498)
T 3qb0_A 271 -------------------------------------------------------------------L------SS---- 273 (498)
T ss_dssp -------------------------------------------------------------------H------HT----
T ss_pred -------------------------------------------------------------------c------cC----
Confidence 0 00
Q ss_pred CCcchhhhhhhccCCCCCChHHHHHHHHHHHHHHhhCCCCccccccccccCCCCCcEEEecce-eeeecccccCCCCCCC
Q psy7893 475 RDEDWDVYKVINKDAGDTDSEEEQERLIELEEILRQHDPEFTSLNQEQELSPKEANQLHIGVE-RMCGPECLFQPSMLGS 553 (691)
Q Consensus 475 ~d~dw~~y~~~~~~~~~~~~~~~~~~l~~~~~~l~~~dp~~~~~~~~~~~~~~~~~~i~l~~E-r~~~pE~LF~Ps~ig~ 553 (691)
.....|.+|||+.|.|+.| ||+|||+||+|+++|.
T Consensus 274 --------------------------------------------~~~~~yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~ 309 (498)
T 3qb0_A 274 --------------------------------------------TAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDI 309 (498)
T ss_dssp --------------------------------------------CCCEEEECSSSCEEEECHHHHHHHHHTTTSCCGGGS
T ss_pred --------------------------------------------cCceEEECCCCCEEEECchHhhhCchhhCCHhHcCC
Confidence 0011356777999999999 9999999999998865
Q ss_pred --------------------------------------------------------------------------------
Q psy7893 554 -------------------------------------------------------------------------------- 553 (691)
Q Consensus 554 -------------------------------------------------------------------------------- 553 (691)
T Consensus 310 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (498)
T 3qb0_A 310 PANWPRSNSGVVKTWRNDYVPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENN 389 (498)
T ss_dssp CTTSCCCSSSCCCCCSCCCCCCCBCC-----------------------------------------------------C
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence
Q ss_pred cccChHHHHHHHhccCCHHHHHHhhcCEEEeccCCCccchHHHHHHHHhhcCCCCceeEEEec---cCCccceeehhhhh
Q psy7893 554 IQAGISETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENRPFQSHFSVSLA---ENPELDAWSGARQF 630 (691)
Q Consensus 554 ~~~Gl~e~i~~si~~~~~d~r~~L~~nI~LtGG~s~~~Gf~eRL~~EL~~l~p~~~~i~V~~~---~dp~~~aW~Gasil 630 (691)
+.+||+++|.+||.+||.|+|+.|++||+||||+|+||||.+||++||+.+.| ..+|+|+.+ .+|.+++|+|||+|
T Consensus 390 ~~~Gi~e~i~~sI~~cd~d~r~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p-~~~i~v~~~~~~~er~~s~WiGgsil 468 (498)
T 3qb0_A 390 ELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHTIERQYQSWLGGSIL 468 (498)
T ss_dssp CSCCHHHHHHHHHHTSCTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHST-TSCCCEECCSCTGGGGSHHHHHHHHH
T ss_pred cCCCchHHHHHHHHhCCHHHHHHHhcCEEEeCCccCchhHHHHHHHHHHHhCC-CCeeEEEcCCCCCccCccEEcccEEE
Confidence 66899999999999999999999999999999999999999999999999999 789999988 68899999999999
Q ss_pred cCccccccccccHHHHhhhch-hhHhhcC
Q psy7893 631 SLSENFHDFAVTQSDYQEKGG-EFFRVHP 658 (691)
Q Consensus 631 as~~~f~~~~itk~eYeE~G~-~~~~~k~ 658 (691)
|++++|+++||||+||+|+|+ .++++||
T Consensus 469 asl~~f~~~witk~EY~E~G~~~iv~~kc 497 (498)
T 3qb0_A 469 TSLGTFHQLWVGKKEYEEVGVERLLNDRF 497 (498)
T ss_dssp HTCHHHHHTSEEHHHHHTTCCHHHHHHTT
T ss_pred ecCcchhceEEEHHHHhhhCcHhhccccC
Confidence 999999999999999999999 8999998
No 3
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=7e-71 Score=601.66 Aligned_cols=369 Identities=24% Similarity=0.448 Sum_probs=323.6
Q ss_pred CCCceEEEEcCCceEEEEEeCCCCCcEEEecceeecccCCC---CcCCcceeccccccccccccEEecccccCcccCHHH
Q psy7893 25 DSSLPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKERG---KKDGETQVGNDISNIEAVRFQLKTQFDKNVVTHYDI 101 (691)
Q Consensus 25 ~~~~~vVID~GS~~~KaG~age~~P~~viPs~vg~~~~~~~---~~~~~~~vG~ea~~~~~~~~~l~~Pi~~G~I~nwd~ 101 (691)
++.++||||+||+++|+||+|++.|++++||++|+++.... .....++||+++..+... +.+++||++|+|.|||.
T Consensus 3 ~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~~~-~~~~~Pi~~G~i~d~d~ 81 (375)
T 2fxu_A 3 DETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDD 81 (375)
T ss_dssp -CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTTS-EEEECSEETTEECCHHH
T ss_pred CCCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcCcc-cceeccccCCcccCHHH
Confidence 45679999999999999999999999999999999876431 011245899999877553 78999999999999999
Q ss_pred HHHHHHHHH-hhcCCCCCCCCCccEEEEecCCCchHHHHHHHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCcccccc
Q psy7893 102 QEQIFDYAF-SHLSINTEGNVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCG 180 (691)
Q Consensus 102 ~e~iw~~~f-~~L~i~~~~~~~~pvLltEp~~~~~~~re~l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~ 180 (691)
++.||+|+| +.|++++. ++|+|+|+|++++...|++++|++||.||+++++++.++++|+|++ |.
T Consensus 82 ~e~i~~~~~~~~L~~~~~---~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~------g~----- 147 (375)
T 2fxu_A 82 MEKIWHHTFYNELRVAPE---EHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYAS------GR----- 147 (375)
T ss_dssp HHHHHHHHHHTTSCCCGG---GSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHT------TC-----
T ss_pred HHHHHHHHHHHhcCCCCc---CCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeec------CC-----
Confidence 999999999 67888876 7999999999999999999999999999999999999999999999 98
Q ss_pred ccccccCCCCCceEEEEEeCCceEEEEEeecCeecccCeEEeeccHHHHHHHHHHHHhhhCCCCCCCCChHHHHHHHHHh
Q psy7893 181 YQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHKLLQLKYPSHINSITPSRSEELLWDY 260 (691)
Q Consensus 181 ~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~a~~ri~iGG~~lt~yL~~lL~~~~~~~~~~~~~~~~e~IKe~~ 260 (691)
++|+|||+|+++|+|+||++|+++.+++.++++||+++|++|.++|..++..+....+...+++||+++
T Consensus 148 -----------~~~lVvDiG~gtt~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~ 216 (375)
T 2fxu_A 148 -----------TTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKL 216 (375)
T ss_dssp -----------SSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHH
T ss_pred -----------CeEEEEEcCCCceEEeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998865443223456799999999
Q ss_pred eeeeccHHHHHHhhhhcccccccccccccCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q psy7893 261 GFVATDYREHLRKWLDAEFYDSNVVKVQLPYAVPVPNLTTEQQKDRRKELAKKLVEMNAKKREERLVDDERHLNELLELR 340 (691)
Q Consensus 261 cyva~dy~~el~~~~~~~~~~~~~~~~qlp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~kr~~~~~~~e~~~~~l~~~~ 340 (691)
|||+.||..++....
T Consensus 217 ~~v~~~~~~e~~~~~----------------------------------------------------------------- 231 (375)
T 2fxu_A 217 CYVALDFENEMATAA----------------------------------------------------------------- 231 (375)
T ss_dssp CCCCSSHHHHHHHHH-----------------------------------------------------------------
T ss_pred HhhcccHHHHHHhhc-----------------------------------------------------------------
Confidence 999988755432100
Q ss_pred HHHhcCCCChhhHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHhhcCCCCCCCchhhhhhhhhhcCcchhHHHHHHH
Q psy7893 341 EIVELTPSDHSHAREAFKSMGINNIQDLNKSINQLQQKIEKTKAKIIAYNNGEDLTEEPKAKLSKEIAVPESEAEFKAWL 420 (691)
Q Consensus 341 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~i~~~~~~~~k~~~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (691)
T Consensus 232 -------------------------------------------------------------------------------- 231 (375)
T 2fxu_A 232 -------------------------------------------------------------------------------- 231 (375)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCCCCCCCCCcchhhhhhhccCCCCCChHHHHHH
Q psy7893 421 IETKKKRAYIIDKKNARKQRRQDLAKRRTAAAQERMRLISELARKEKRDDDFGMRDEDWDVYKVINKDAGDTDSEEEQER 500 (691)
Q Consensus 421 ~~~~~~r~~~~~k~~~r~~~~~~~~~~~s~~~q~r~~~~~~l~~~~~~~d~~~~~d~dw~~y~~~~~~~~~~~~~~~~~~ 500 (691)
+ .. +
T Consensus 232 -----------------------------------------~------~~--~--------------------------- 235 (375)
T 2fxu_A 232 -----------------------------------------S------SS--S--------------------------- 235 (375)
T ss_dssp -----------------------------------------H------CS--T---------------------------
T ss_pred -----------------------------------------c------cC--c---------------------------
Confidence 0 00 0
Q ss_pred HHHHHHHHhhCCCCccccccccccCCCCCcEEEecceeeeecccccCCCCCCCcccChHHHHHHHhccCCHHHHHHhhcC
Q psy7893 501 LIELEEILRQHDPEFTSLNQEQELSPKEANQLHIGVERMCGPECLFQPSMLGSIQAGISETLNFVLNSYPQHIAQSLANN 580 (691)
Q Consensus 501 l~~~~~~l~~~dp~~~~~~~~~~~~~~~~~~i~l~~Er~~~pE~LF~Ps~ig~~~~Gl~e~i~~si~~~~~d~r~~L~~n 580 (691)
....|.+|+|+.+.++.|||.+||+||+|+++|.+..||+++|.++|.+||+++|+.|++|
T Consensus 236 -------------------~~~~~~lpdg~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~ 296 (375)
T 2fxu_A 236 -------------------LEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYAN 296 (375)
T ss_dssp -------------------TCEEEECTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTC
T ss_pred -------------------cCeEEECCCCCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhC
Confidence 0012445668899999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCCCccchHHHHHHHHhhcCCCCceeEEEeccCCccceeehhhhhcCccccccccccHHHHhhhchhhHhhcCC
Q psy7893 581 IFVTGSLCQLPGFVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFSLSENFHDFAVTQSDYQEKGGEFFRVHPC 659 (691)
Q Consensus 581 I~LtGG~s~~~Gf~eRL~~EL~~l~p~~~~i~V~~~~dp~~~aW~Gasilas~~~f~~~~itk~eYeE~G~~~~~~k~~ 659 (691)
|+||||+|+||||.+||++||..+.|...+++|..+.+|.+++|+||+++|++++|+++||||+||+|+|++++++||+
T Consensus 297 IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 297 NVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp EEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC----
T ss_pred cEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhcc
Confidence 9999999999999999999999999988899999999999999999999999999999999999999999999999985
No 4
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.2e-72 Score=642.65 Aligned_cols=441 Identities=16% Similarity=0.190 Sum_probs=296.5
Q ss_pred CceEEEEcCCceEEEEEeCCCCCcEEEecceeecccCCC-----------------------------------------
Q psy7893 27 SLPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKERG----------------------------------------- 65 (691)
Q Consensus 27 ~~~vVID~GS~~~KaG~age~~P~~viPs~vg~~~~~~~----------------------------------------- 65 (691)
+.+||||+||+++||||||++.|.. |||+||+++....
T Consensus 15 ~~iIVIdpGS~~~riG~A~d~~P~~-iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (593)
T 4fo0_A 15 NFIIVIHPGSTTLRIGRATDTLPAS-IPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSN 93 (593)
T ss_dssp GGEEEEECCSSEEEEEETTCSSCEE-EECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred CCEEEEeCCCCCeEeeecCCCCCCe-eeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhc
Confidence 5589999999999999999999975 6999998753210
Q ss_pred -----------------------------------CcCCcceeccccccccc-cccEEecccccC-----------cccC
Q psy7893 66 -----------------------------------KKDGETQVGNDISNIEA-VRFQLKTQFDKN-----------VVTH 98 (691)
Q Consensus 66 -----------------------------------~~~~~~~vG~ea~~~~~-~~~~l~~Pi~~G-----------~I~n 98 (691)
.....++||++|..+.. ..+.+++||++| ++.|
T Consensus 94 ~~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~ 173 (593)
T 4fo0_A 94 GTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAV 173 (593)
T ss_dssp SCCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHH
T ss_pred ccccCCCcHHHhhhhhccCCCcccCCCCccccccccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhcC
Confidence 00124689999876532 248999999999 6889
Q ss_pred HHHHHHHHHHHH-hhcCCCCCCCCCccEEEEecCCCchHHHHHHHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCccc
Q psy7893 99 YDIQEQIFDYAF-SHLSINTEGNVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVII 177 (691)
Q Consensus 99 wd~~e~iw~~~f-~~L~i~~~~~~~~pvLltEp~~~~~~~re~l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~ 177 (691)
||++|.||+|+| ++|++++++..+||||||||+++++..|++|+|+|||+|+||+++++.+++||+||+ |+
T Consensus 174 wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~------G~-- 245 (593)
T 4fo0_A 174 LADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGS------GL-- 245 (593)
T ss_dssp HHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHH------TC--
T ss_pred HHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHC------CC--
Confidence 999999999999 579998875456999999999999999999999999999999999999999999999 98
Q ss_pred cccccccccCCCCCceEEEEEeCCceEEEEEeecCeecccCeEEeeccHHHHHHHHHHHHhhhCCCCCC-C----CChHH
Q psy7893 178 SCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHKLLQLKYPSHIN-S----ITPSR 252 (691)
Q Consensus 178 ~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~a~~ri~iGG~~lt~yL~~lL~~~~~~~~~-~----~~~~~ 252 (691)
+||||||||++.|+|+||++|+++.++++++++||++||+||+++|..++..+.. . .+..+
T Consensus 246 --------------~tglVVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~ 311 (593)
T 4fo0_A 246 --------------SSTCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLL 311 (593)
T ss_dssp --------------SEEEEEEECSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHH
T ss_pred --------------CceEEEEeCCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHH
Confidence 9999999999999999999999999999999999999999999999988533221 1 23457
Q ss_pred HHHHHHHheeeeccHHHHHHhhhhcccccccccccccCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHH
Q psy7893 253 SEELLWDYGFVATDYREHLRKWLDAEFYDSNVVKVQLPYAVPVPNLTTEQQKDRRKELAKKLVEMNAKKREERLVDDERH 332 (691)
Q Consensus 253 ~e~IKe~~cyva~dy~~el~~~~~~~~~~~~~~~~qlp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~kr~~~~~~~e~~ 332 (691)
+++|||++|||+.|+..+.. .....++|....... ..
T Consensus 312 v~~iKe~~c~v~~d~~~~~~----------~~~~~~~p~~~~~~~-~~-------------------------------- 348 (593)
T 4fo0_A 312 LQHLKETFCHLDQDISGLQD----------HEFQIRHPDSPALLY-QF-------------------------------- 348 (593)
T ss_dssp HHHHHHHHCBCCTTCCSCEE----------EEEEECCTTSCEEEE-EE--------------------------------
T ss_pred HHHHHHHhcccccchHHhhh----------hhhhcccCCCCceee-EE--------------------------------
Confidence 99999999999988653211 111222221100000 00
Q ss_pred HHHHHHHHHHHhcCCCChhhHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHhhcCCCCCCCchhhhhhhhhhcCcch
Q psy7893 333 LNELLELREIVELTPSDHSHAREAFKSMGINNIQDLNKSINQLQQKIEKTKAKIIAYNNGEDLTEEPKAKLSKEIAVPES 412 (691)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~i~~~~~~~~k~~~k~~~~~~~~~l~~~~~~~~~~~~~~~~~ 412 (691)
..+ ++. ++.|
T Consensus 349 -----------~~~-----------------~E~----------------------------------------~~~p-- 358 (593)
T 4fo0_A 349 -----------RLG-----------------DEK----------------------------------------LQAP-- 358 (593)
T ss_dssp -----------EEC-----------------THH----------------------------------------HHHH--
T ss_pred -----------ecc-----------------chh----------------------------------------hcCc--
Confidence 000 000 0000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCCCCCCCCCcchhhhhhhccCCCCC
Q psy7893 413 EAEFKAWLIETKKKRAYIIDKKNARKQRRQDLAKRRTAAAQERMRLISELARKEKRDDDFGMRDEDWDVYKVINKDAGDT 492 (691)
Q Consensus 413 ~~~~~~~~~~~~~~r~~~~~k~~~r~~~~~~~~~~~s~~~q~r~~~~~~l~~~~~~~d~~~~~d~dw~~y~~~~~~~~~~ 492 (691)
++ .-.+..+++............ ..+.
T Consensus 359 -------------------------------------------------~~--lf~p~~~~~~~~~~~~~~~~~--~~~~ 385 (593)
T 4fo0_A 359 -------------------------------------------------MA--LFYPATFGIVGQKMTTLQHRS--QGDP 385 (593)
T ss_dssp -------------------------------------------------HT--TTSGGGGCCCSSCCEEECC--------
T ss_pred -------------------------------------------------hh--hcChhhhcccccccchhhhhc--ccCc
Confidence 00 000111122211000000000 0000
Q ss_pred ChHHHHHHHHHHHHHHhhCCCCccccccccccCCCCCcEEEecceeeeecccccCCCC----------------------
Q psy7893 493 DSEEEQERLIELEEILRQHDPEFTSLNQEQELSPKEANQLHIGVERMCGPECLFQPSM---------------------- 550 (691)
Q Consensus 493 ~~~~~~~~l~~~~~~l~~~dp~~~~~~~~~~~~~~~~~~i~l~~Er~~~pE~LF~Ps~---------------------- 550 (691)
+...+...+....... .-..........+.+|++..+.++.+|+.+||.||+|..
T Consensus 386 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~ 462 (593)
T 4fo0_A 386 EDPHDEHYLLATQSKQ---EQSAKATADRKSASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTA 462 (593)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccchhhhhhhhcccch---hhhhhcccccccccCCCCcccccccccccCchhccCccccccccccccccccccccccccc
Confidence 0000000110000000 000000112345788999999999999999999999953
Q ss_pred ----------CCCcccChHHHHHHHhccCC-HHHHHHhhcCEEEeccCCCccchHHHHHHHHhhcCCCCc-----eeEEE
Q psy7893 551 ----------LGSIQAGISETLNFVLNSYP-QHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENRPFQS-----HFSVS 614 (691)
Q Consensus 551 ----------ig~~~~Gl~e~i~~si~~~~-~d~r~~L~~nI~LtGG~s~~~Gf~eRL~~EL~~l~p~~~-----~i~V~ 614 (691)
++.+..||+++|.+||.+|+ .|+|+.|++||+||||+|+||||.+||++||+.++|... +|+|+
T Consensus 463 ~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~~~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~ 542 (593)
T 4fo0_A 463 LMSRKTAISLFEGKALGLDKAILHSIDCCSSDDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVI 542 (593)
T ss_dssp --------CHHHHSCCCHHHHHHHHHHTCSSHHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEE
T ss_pred ccccccccccccccCCCHHHHHHHHHHhCCcHHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEE
Confidence 23456799999999999998 599999999999999999999999999999999999653 58898
Q ss_pred ecc---CCccceeehhhhhcCccccccccccHHHHhhhchhhHhhcCC
Q psy7893 615 LAE---NPELDAWSGARQFSLSENFHDFAVTQSDYQEKGGEFFRVHPC 659 (691)
Q Consensus 615 ~~~---dp~~~aW~Gasilas~~~f~~~~itk~eYeE~G~~~~~~k~~ 659 (691)
.++ ||.+++|+|||+||++++|+++||||+||+|+|+++|++||+
T Consensus 543 ~~p~~~d~~~~aW~GgSilasL~~f~~~wItk~EYeE~G~~il~~kc~ 590 (593)
T 4fo0_A 543 TRPKDMDPRLIAWKGGAVLACLDTTQELWIYQREWQRFGVRMLRERAA 590 (593)
T ss_dssp SSGGGCCTTTHHHHHHHHHHHCGGGGGTCEEHHHHHHHTTHHHHHHCS
T ss_pred CCCCCCCCceeeehhhHHHhcCccHHHeeECHHHHHhhCcHHHhhcCC
Confidence 875 899999999999999999999999999999999999999996
No 5
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=4.6e-72 Score=615.19 Aligned_cols=366 Identities=23% Similarity=0.387 Sum_probs=154.9
Q ss_pred CCCceEEEEcCCceEEEEEeCCCCCcEEEecceeecccCCCC-----cCCcceeccccccccccccEEecccccCcccCH
Q psy7893 25 DSSLPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKERGK-----KDGETQVGNDISNIEAVRFQLKTQFDKNVVTHY 99 (691)
Q Consensus 25 ~~~~~vVID~GS~~~KaG~age~~P~~viPs~vg~~~~~~~~-----~~~~~~vG~ea~~~~~~~~~l~~Pi~~G~I~nw 99 (691)
.+..+||||+||++|||||+|++.|++++||+||+++..... ....++||+++..+++ .+.+++|+++|+|.||
T Consensus 4 ~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~-~~~~~~Pi~~G~i~dw 82 (394)
T 1k8k_B 4 QGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRS-MLEVNYPMENGIVRNW 82 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCC-CceeeccccCCEEecH
Confidence 456789999999999999999999999999999998764311 1124589999987755 3788999999999999
Q ss_pred HHHHHHHHHHH--hhcCCCCCCCCCccEEEEecCCCchHHHHHHHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCccc
Q psy7893 100 DIQEQIFDYAF--SHLSINTEGNVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVII 177 (691)
Q Consensus 100 d~~e~iw~~~f--~~L~i~~~~~~~~pvLltEp~~~~~~~re~l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~ 177 (691)
|.++.||+|+| +.|++++. +||+|+|+|++++...|++++|++||.||+|+++++.++++|+|++ |+
T Consensus 83 d~~e~i~~~~~~~~~L~~~~~---~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~------g~-- 151 (394)
T 1k8k_B 83 DDMKHLWDYTFGPEKLNIDTR---NCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQ------GL-- 151 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcccccCcCCC---CCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhC------CC--
Confidence 99999999999 57888876 7999999999999999999999999999999999999999999999 98
Q ss_pred cccccccccCCCCCceEEEEEeCCceEEEEEeecCeecccCeEEeeccHHHHHHHHHHHHhhhCCCCCCCCChHHHHHHH
Q psy7893 178 SCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHKLLQLKYPSHINSITPSRSEELL 257 (691)
Q Consensus 178 ~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~a~~ri~iGG~~lt~yL~~lL~~~~~~~~~~~~~~~~e~IK 257 (691)
++|+|||+|+++|+|+||++|+++.++++++++||+++|++|.++|..++..+....+...+++||
T Consensus 152 --------------~~~lVVDiG~g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK 217 (394)
T 1k8k_B 152 --------------LTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIK 217 (394)
T ss_dssp ----------------CCEEEECSSCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHH
T ss_pred --------------ceEEEEEcCCCceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998866665556778899999
Q ss_pred HHheeeeccHHHHHHhhhhcccccccccccccCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q psy7893 258 WDYGFVATDYREHLRKWLDAEFYDSNVVKVQLPYAVPVPNLTTEQQKDRRKELAKKLVEMNAKKREERLVDDERHLNELL 337 (691)
Q Consensus 258 e~~cyva~dy~~el~~~~~~~~~~~~~~~~qlp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~kr~~~~~~~e~~~~~l~ 337 (691)
+++|||+.||..++....
T Consensus 218 ~~~~~v~~d~~~~~~~~~-------------------------------------------------------------- 235 (394)
T 1k8k_B 218 EKLCYVGYNIEQEQKLAL-------------------------------------------------------------- 235 (394)
T ss_dssp HHHCCCCSSHHHHHHHHH--------------------------------------------------------------
T ss_pred HhheeEecCHHHHHHhhc--------------------------------------------------------------
Confidence 999999988654432100
Q ss_pred HHHHHHhcCCCChhhHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHhhcCCCCCCCchhhhhhhhhhcCcchhHHHH
Q psy7893 338 ELREIVELTPSDHSHAREAFKSMGINNIQDLNKSINQLQQKIEKTKAKIIAYNNGEDLTEEPKAKLSKEIAVPESEAEFK 417 (691)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~i~~~~~~~~k~~~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 417 (691)
.
T Consensus 236 ---------------------------------------------------~---------------------------- 236 (394)
T 1k8k_B 236 ---------------------------------------------------E---------------------------- 236 (394)
T ss_dssp ---------------------------------------------------H----------------------------
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCCCCCCCCCcchhhhhhhccCCCCCChHHH
Q psy7893 418 AWLIETKKKRAYIIDKKNARKQRRQDLAKRRTAAAQERMRLISELARKEKRDDDFGMRDEDWDVYKVINKDAGDTDSEEE 497 (691)
Q Consensus 418 ~~~~~~~~~r~~~~~k~~~r~~~~~~~~~~~s~~~q~r~~~~~~l~~~~~~~d~~~~~d~dw~~y~~~~~~~~~~~~~~~ 497 (691)
.. +.
T Consensus 237 ---------------------------------------------------~~--~~----------------------- 240 (394)
T 1k8k_B 237 ---------------------------------------------------TT--VL----------------------- 240 (394)
T ss_dssp ---------------------------------------------------CS--TT-----------------------
T ss_pred ---------------------------------------------------CC--cC-----------------------
Confidence 00 00
Q ss_pred HHHHHHHHHHHhhCCCCccccccccccCCCCCcEEEecceeeeecccccCCCCCCCcccChHHHHHHHhccCCHHHHHHh
Q psy7893 498 QERLIELEEILRQHDPEFTSLNQEQELSPKEANQLHIGVERMCGPECLFQPSMLGSIQAGISETLNFVLNSYPQHIAQSL 577 (691)
Q Consensus 498 ~~~l~~~~~~l~~~dp~~~~~~~~~~~~~~~~~~i~l~~Er~~~pE~LF~Ps~ig~~~~Gl~e~i~~si~~~~~d~r~~L 577 (691)
...|.+|+|+.+.|+.|||++||+||+|+++|.+..||+++|.++|.+||+++|+.|
T Consensus 241 -----------------------~~~~~lpdg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l 297 (394)
T 1k8k_B 241 -----------------------VESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEF 297 (394)
T ss_dssp -----------------------CEEEECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHH
T ss_pred -----------------------ceEEECCCCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHH
Confidence 012456678899999999999999999999999999999999999999999999999
Q ss_pred hcCEEEeccCCCccchHHHHHHHHhhcC-----------CCCceeEEEeccCCccceeehhhhhcCccccc-cccccHHH
Q psy7893 578 ANNIFVTGSLCQLPGFVERLNKDLLENR-----------PFQSHFSVSLAENPELDAWSGARQFSLSENFH-DFAVTQSD 645 (691)
Q Consensus 578 ~~nI~LtGG~s~~~Gf~eRL~~EL~~l~-----------p~~~~i~V~~~~dp~~~aW~Gasilas~~~f~-~~~itk~e 645 (691)
++||+||||+|+||||.+||++||..+. |...+++|..+++|.+++|+||+++|++++|+ ++||||+|
T Consensus 298 ~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~~itk~e 377 (394)
T 1k8k_B 298 YKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQE 377 (394)
T ss_dssp HTTCEEESGGGCSTTHHHHHHHHHHHHHHHHTCSSCCCTTCCCCC-----------------------------------
T ss_pred HhCEEEeCcccccccHHHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCCcCCccceeecHHH
Confidence 9999999999999999999999999988 87778999989999999999999999999999 99999999
Q ss_pred HhhhchhhHhh
Q psy7893 646 YQEKGGEFFRV 656 (691)
Q Consensus 646 YeE~G~~~~~~ 656 (691)
|+|+|++++++
T Consensus 378 Y~e~G~~~~~~ 388 (394)
T 1k8k_B 378 YQEKGVRVLEK 388 (394)
T ss_dssp -----------
T ss_pred HhhhCHHHHHh
Confidence 99999999987
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=3.6e-67 Score=579.68 Aligned_cols=384 Identities=22% Similarity=0.364 Sum_probs=319.1
Q ss_pred cCCCCceEEEEcCCceEEEEEeCCCCCcEEEecceeecccCCC-----------CcCCcceeccccccccccccEEeccc
Q psy7893 23 LRDSSLPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKERG-----------KKDGETQVGNDISNIEAVRFQLKTQF 91 (691)
Q Consensus 23 ~~~~~~~vVID~GS~~~KaG~age~~P~~viPs~vg~~~~~~~-----------~~~~~~~vG~ea~~~~~~~~~l~~Pi 91 (691)
|+.+..+||||+||+++|+||+|++.|++++||+|++++.... .....++||+++..++ ++.+++||
T Consensus 1 m~~~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~--~~~~~~pi 78 (418)
T 1k8k_A 1 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKP--TYATKWPI 78 (418)
T ss_dssp --CCSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCT--TSEEECCE
T ss_pred CCCCCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcC--CCEEeccc
Confidence 4445679999999999999999999999999999999875420 0112369999998775 38899999
Q ss_pred ccCcccCHHHHHHHHHHHH-hhcCCCCCCCCCccEEEEecCCCchHHHHHHHHHHHHhcCCCeEeechhhHHhhhhccCC
Q psy7893 92 DKNVVTHYDIQEQIFDYAF-SHLSINTEGNVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWE 170 (691)
Q Consensus 92 ~~G~I~nwd~~e~iw~~~f-~~L~i~~~~~~~~pvLltEp~~~~~~~re~l~EilFE~f~vp~v~~~~~alla~ya~~~~ 170 (691)
++|+|.|||.++.||+|+| +.|+++++ ++++|+|+|++++...|+++.+++||.||+++++++.++++|+|++...
T Consensus 79 ~~G~i~d~d~~e~i~~~~~~~~L~~~~~---~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~ 155 (418)
T 1k8k_A 79 RHGIVEDWDLMERFMEQVIFKYLRAEPE---DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTS 155 (418)
T ss_dssp ETTEESCHHHHHHHHHHHHHTTTCCCGG---GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGS
T ss_pred cCCEECCHHHHHHHHHHHHHhccCCCCC---CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcc
Confidence 9999999999999999999 46988876 7999999999999999999999999999999999999999999983100
Q ss_pred CCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecCeecccCeEEeeccHHHHHHHHHHHHhhhCCCCCCCCCh
Q psy7893 171 GQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHKLLQLKYPSHINSITP 250 (691)
Q Consensus 171 ~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~a~~ri~iGG~~lt~yL~~lL~~~~~~~~~~~~~ 250 (691)
.|. +... .+|+|||+|+++|+|+||++|+++.+++.++++||+++|++|.++|..++..+....+.
T Consensus 156 --~~~-----------~~~~-~~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~ 221 (418)
T 1k8k_A 156 --RQV-----------GERT-LTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSL 221 (418)
T ss_dssp --TTC-----------CSCC-CCEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHH
T ss_pred --ccc-----------CCCC-CeEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHH
Confidence 010 0011 48899999999999999999999999999999999999999999999887655434456
Q ss_pred HHHHHHHHHheeeeccHHHHHHhhhhcccccccccccccCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhH
Q psy7893 251 SRSEELLWDYGFVATDYREHLRKWLDAEFYDSNVVKVQLPYAVPVPNLTTEQQKDRRKELAKKLVEMNAKKREERLVDDE 330 (691)
Q Consensus 251 ~~~e~IKe~~cyva~dy~~el~~~~~~~~~~~~~~~~qlp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~kr~~~~~~~e 330 (691)
..+++||+++|||+.||..++..+...
T Consensus 222 ~~~e~iK~~~~~v~~~~~~e~~~~~~~----------------------------------------------------- 248 (418)
T 1k8k_A 222 ETAKAVKERYSYVCPDLVKEFNKYDTD----------------------------------------------------- 248 (418)
T ss_dssp HHHHHHHHHHCCCCSCHHHHHHHHHHS-----------------------------------------------------
T ss_pred HHHHHHHHhhchhcccHHHHHHhhccc-----------------------------------------------------
Confidence 789999999999998876654321000
Q ss_pred HHHHHHHHHHHHHhcCCCChhhHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHhhcCCCCCCCchhhhhhhhhhcCc
Q psy7893 331 RHLNELLELREIVELTPSDHSHAREAFKSMGINNIQDLNKSINQLQQKIEKTKAKIIAYNNGEDLTEEPKAKLSKEIAVP 410 (691)
Q Consensus 331 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~i~~~~~~~~k~~~k~~~~~~~~~l~~~~~~~~~~~~~~~ 410 (691)
...
T Consensus 249 ----------------------------------------------------------~~~------------------- 251 (418)
T 1k8k_A 249 ----------------------------------------------------------GSK------------------- 251 (418)
T ss_dssp ----------------------------------------------------------GGG-------------------
T ss_pred ----------------------------------------------------------ccc-------------------
Confidence 000
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCCCCCCCCCcchhhhhhhccCCC
Q psy7893 411 ESEAEFKAWLIETKKKRAYIIDKKNARKQRRQDLAKRRTAAAQERMRLISELARKEKRDDDFGMRDEDWDVYKVINKDAG 490 (691)
Q Consensus 411 ~~~~~~~~~~~~~~~~r~~~~~k~~~r~~~~~~~~~~~s~~~q~r~~~~~~l~~~~~~~d~~~~~d~dw~~y~~~~~~~~ 490 (691)
+ ...|.+||.
T Consensus 252 ---------------------------------------------------~------~~~~~lpd~------------- 261 (418)
T 1k8k_A 252 ---------------------------------------------------W------IKQYTGINA------------- 261 (418)
T ss_dssp ---------------------------------------------------T------CEEEEEECT-------------
T ss_pred ---------------------------------------------------c------ceeEECCCC-------------
Confidence 0 011122210
Q ss_pred CCChHHHHHHHHHHHHHHhhCCCCccccccccccCCCCCcEEEecceeeeecccccCCCCCCCcc-cChHHHHHHHhccC
Q psy7893 491 DTDSEEEQERLIELEEILRQHDPEFTSLNQEQELSPKEANQLHIGVERMCGPECLFQPSMLGSIQ-AGISETLNFVLNSY 569 (691)
Q Consensus 491 ~~~~~~~~~~l~~~~~~l~~~dp~~~~~~~~~~~~~~~~~~i~l~~Er~~~pE~LF~Ps~ig~~~-~Gl~e~i~~si~~~ 569 (691)
.....+.+.++.|||++||+||+|+++|.+. .||+++|.++|.+|
T Consensus 262 ----------------------------------~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~ 307 (418)
T 1k8k_A 262 ----------------------------------ISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNC 307 (418)
T ss_dssp ----------------------------------TTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHS
T ss_pred ----------------------------------CCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcC
Confidence 0001137999999999999999999999886 79999999999999
Q ss_pred CHHHHHHhhcCEEEeccCCCccchHHHHHHHHhhcC----------------CCCceeEEEeccCCccceeehhhhhcCc
Q psy7893 570 PQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENR----------------PFQSHFSVSLAENPELDAWSGARQFSLS 633 (691)
Q Consensus 570 ~~d~r~~L~~nI~LtGG~s~~~Gf~eRL~~EL~~l~----------------p~~~~i~V~~~~dp~~~aW~Gasilas~ 633 (691)
|.++|+.+++||+||||+|+||||.+||++||..++ |...+++|..+++|.+++|+|||+||++
T Consensus 308 ~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 308 PIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp CGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred CHHHHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 999999999999999999999999999999999986 5566789999999999999999999999
Q ss_pred cccccccccHHHHhhhchhhHhhcCC
Q psy7893 634 ENFHDFAVTQSDYQEKGGEFFRVHPC 659 (691)
Q Consensus 634 ~~f~~~~itk~eYeE~G~~~~~~k~~ 659 (691)
++|+++||||+||+|+|++++++||+
T Consensus 388 ~~f~~~~itk~ey~e~G~~~~~~~~~ 413 (418)
T 1k8k_A 388 PEFYQVCHTKKDYEEIGPSICRHNPV 413 (418)
T ss_dssp HHHHHHSEEHHHHHHHCGGGGGCCCC
T ss_pred ccHhheEEEHHHHhhhCHHHHhhhcc
Confidence 99999999999999999999999765
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=7.1e-58 Score=517.35 Aligned_cols=217 Identities=18% Similarity=0.194 Sum_probs=187.8
Q ss_pred CCCceEEEEcCCceEEEEEeCCCCCcEEEecceeecccC-----------C----C-----------------------C
Q psy7893 25 DSSLPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKE-----------R----G-----------------------K 66 (691)
Q Consensus 25 ~~~~~vVID~GS~~~KaG~age~~P~~viPs~vg~~~~~-----------~----~-----------------------~ 66 (691)
+...+|||..||.++|+|+|.|..|. .+|++||++... . . +
T Consensus 38 ~~~~~IVIHpGS~~lRIG~AsD~~P~-~ip~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~k~rmr~~k 116 (655)
T 4am6_A 38 DPTATIVIHPGSNSIKIGFPKDDHPV-VVPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEMEKNFRERMRYYK 116 (655)
T ss_dssp CGGGEEEEECCSSEEEEECTTSSSCE-EEESCEEEEGGGSCCSSSCCCCTTCCCSCCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCeEEEcCCCcceeeeecCCCCCc-ccceeEEeccccccCCCccccCccccchhhhHHHHHHHHHHHHHHHHHHhhcC
Confidence 34679999999999999999999997 579999974310 0 0 0
Q ss_pred ------------------------------------cCCcceeccccccccccccEEecccccCccc----C-------H
Q psy7893 67 ------------------------------------KDGETQVGNDISNIEAVRFQLKTQFDKNVVT----H-------Y 99 (691)
Q Consensus 67 ------------------------------------~~~~~~vG~ea~~~~~~~~~l~~Pi~~G~I~----n-------w 99 (691)
...+++||++|..+....+.+++||++|+|. | |
T Consensus 117 ~r~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~~~d~~VGdEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q~~W 196 (655)
T 4am6_A 117 RKVPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAELI 196 (655)
T ss_dssp CCCSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCCTTSCEEHHHHHTBCTTTEEEECSEETTEECTTCSSCSSHHHHH
T ss_pred CCCCCCCHHHHHHhcCCCCCeECCCCCCccccccccCCCCEEEehHHhhCCccCeEEeccccCCEecccCCccccccccH
Confidence 0014689999987543458999999999998 8 9
Q ss_pred HHHHHHHHHHHh--hcCCCCCCCCCccEEEEecCCCchHHHHHHHHHHHHhcCCCeEeechhhHHhhhhccCCCCCC-cc
Q psy7893 100 DIQEQIFDYAFS--HLSINTEGNVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSG-VI 176 (691)
Q Consensus 100 d~~e~iw~~~f~--~L~i~~~~~~~~pvLltEp~~~~~~~re~l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G-~~ 176 (691)
|.+|.||+|+|. +|++++....+||||||||+++++..|++|+|+|||.||||+++++.++++|+||+ | .
T Consensus 197 D~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyas------Gl~- 269 (655)
T 4am6_A 197 SDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGA------GIS- 269 (655)
T ss_dssp HHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHS------CCS-
T ss_pred HHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhC------CCC-
Confidence 999999999996 79998742237999999999999999999999999999999999999999999999 8 6
Q ss_pred ccccccccccCCCCCceEEEEEeCCceEEEEEeecCeecccCeEEeeccHHHHHHHHHHHHhhhCC-----CCCCCCChH
Q psy7893 177 ISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHKLLQLKYP-----SHINSITPS 251 (691)
Q Consensus 177 ~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~a~~ri~iGG~~lt~yL~~lL~~~~~-----~~~~~~~~~ 251 (691)
++|||||+|+++|+|+||++|+++.++++|+++||+++|+||+++|+.++. .+....+..
T Consensus 270 ---------------ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~e 334 (655)
T 4am6_A 270 ---------------TSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWL 334 (655)
T ss_dssp ---------------SCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHH
T ss_pred ---------------CceEEEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHH
Confidence 899999999999999999999999999999999999999999999998853 233334567
Q ss_pred HHHHHHHHheeee
Q psy7893 252 RSEELLWDYGFVA 264 (691)
Q Consensus 252 ~~e~IKe~~cyva 264 (691)
++++|||++|||+
T Consensus 335 iVrdIKEk~CyVs 347 (655)
T 4am6_A 335 LAERLKKNFTTFQ 347 (655)
T ss_dssp HHHHHHHHHCCCC
T ss_pred HHHHHHHheEEEc
Confidence 8999999999994
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=5.5e-32 Score=290.52 Aligned_cols=208 Identities=14% Similarity=0.080 Sum_probs=169.2
Q ss_pred ceEEEEcCCceEEEEEeCCCCCcEEEecceeecccCCCCcCCcceecccccccccc---ccEEecccccCcccCHHHHHH
Q psy7893 28 LPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKERGKKDGETQVGNDISNIEAV---RFQLKTQFDKNVVTHYDIQEQ 104 (691)
Q Consensus 28 ~~vVID~GS~~~KaG~age~~P~~viPs~vg~~~~~~~~~~~~~~vG~ea~~~~~~---~~~l~~Pi~~G~I~nwd~~e~ 104 (691)
.+|+||+||.++++|++++. |.+.+||+|+...... ..++||++|...... +..+.+|+++|+|.||+.++.
T Consensus 4 ~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~~----~~~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~~~~~~~~ 78 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTTG----EILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTVALV 78 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTTC----CEEEESHHHHTTTTCCCTTEEEECCEETTEESSHHHHHH
T ss_pred ceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCCC----cEEEEcHHHHHhcccCCCCeEEEecCCCCeeCChHHHHH
Confidence 58999999999999998765 8888999999876421 124799998765431 356789999999999999999
Q ss_pred HHHHHHhhcCC-C-CCCCCCccEEEEecCCCchHHHHHHHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCcccccccc
Q psy7893 105 IFDYAFSHLSI-N-TEGNVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQ 182 (691)
Q Consensus 105 iw~~~f~~L~i-~-~~~~~~~pvLltEp~~~~~~~re~l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~~ 182 (691)
+|.++|.++.. . .. ..++++|.|+..+...|+.+.+ +|+.+|++.+.++.++++|+++. |.
T Consensus 79 i~~~~l~~~~~~~~~~---~~~~vitvP~~~~~~~r~~~~~-a~~~aG~~~~~li~ep~Aaa~~~------~~------- 141 (344)
T 1jce_A 79 MLRYFINKAKGGMNLF---KPRVVIGVPIGITDVERRAILD-AGLEAGASKVFLIEEPMAAAIGS------NL------- 141 (344)
T ss_dssp HHHHHHHHHHTSCCSC---CCEEEEEECTTCCHHHHHHHHH-HHHHTTCSEEEEEEHHHHHHHHT------TC-------
T ss_pred HHHHHHHHHhhccccC---CCeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEeccCCHHHHHHhc------CC-------
Confidence 99999976533 2 22 5789999999999999998888 57999999999999999999998 54
Q ss_pred ccccCCCCCceEEEEEeCCceEEEEEeecCeecccCeEEeeccHHHHHHHHHHHHhhhCCCCCCCCChHHHHHHHHHhee
Q psy7893 183 VYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHKLLQLKYPSHINSITPSRSEELLWDYGF 262 (691)
Q Consensus 183 ~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~a~~ri~iGG~~lt~yL~~lL~~~~~~~~~~~~~~~~e~IKe~~cy 262 (691)
+.....+.+|||+|+++|+|+++..|.++ ....+++||.++|+.|.++|..++.. .+....++.+|+.+|+
T Consensus 142 ----~~~~~~~~lVvDiGggttdvsv~~~~~~~--~~~~~~lGG~~id~~l~~~l~~~~~~---~~~~~~ae~~K~~l~~ 212 (344)
T 1jce_A 142 ----NVEEPSGNMVVDIGGGTTEVAVISLGSIV--TWESIRIAGDEMDEAIVQYVRETYRV---AIGERTAERVKIEIGN 212 (344)
T ss_dssp ----CTTSSSCEEEEEECSSCEEEEEEETTEEE--EEEEESCSHHHHHHHHHHHHHHHHCE---ECCHHHHHHHHHHHCB
T ss_pred ----CCCCCceEEEEEeCCCeEEEEEEEcCCEE--eeCCCCccChhHHHHHHHHHHHHhCc---ccCHHHHHHHHHHHhc
Confidence 12234789999999999999999999887 35788999999999999999876421 2345668888888887
Q ss_pred eecc
Q psy7893 263 VATD 266 (691)
Q Consensus 263 va~d 266 (691)
+..+
T Consensus 213 ~~~~ 216 (344)
T 1jce_A 213 VFPS 216 (344)
T ss_dssp CSCC
T ss_pred cCcc
Confidence 6543
No 9
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.83 E-value=2.3e-19 Score=185.68 Aligned_cols=155 Identities=12% Similarity=0.029 Sum_probs=116.3
Q ss_pred CceEEEEcCCceEEEEEeCCCCCcEEEecceeecccCCCCcCCcceeccccccccccccEEecccccCcccCHHHHHHHH
Q psy7893 27 SLPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKERGKKDGETQVGNDISNIEAVRFQLKTQFDKNVVTHYDIQEQIF 106 (691)
Q Consensus 27 ~~~vVID~GS~~~KaG~age~~P~~viPs~vg~~~~~~~~~~~~~~vG~ea~~~~~~~~~l~~Pi~~G~I~nwd~~e~iw 106 (691)
...++||+||+++|+.+...+. . .+|.. ..-..|+++|.|.||+.++.+|
T Consensus 28 ~~~~gIDiGS~s~k~vi~~~~~-~---------------------~l~~~--------~~~~~~l~~g~i~d~~~~~~~l 77 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTDQEG-I---------------------PVAGA--------LKWASVVKDGLVVDYIGAIQIV 77 (272)
T ss_dssp CCEEEEECCSSEEEEEEECTTC-C---------------------EEEEE--------EEECCCCBTTBCTTHHHHHHHH
T ss_pred CEEEEEEcccceEEEEEECCCC-c---------------------EEEEE--------eecccccCCCEEEcHHHHHHHH
Confidence 4579999999999998743322 1 11110 1234689999999999999999
Q ss_pred HHHHhhc-CCCCCCCCCccEEEEecCCCchHHHHHHHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCccccccccccc
Q psy7893 107 DYAFSHL-SINTEGNVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQ 185 (691)
Q Consensus 107 ~~~f~~L-~i~~~~~~~~pvLltEp~~~~~~~re~l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~~~~~ 185 (691)
.+++... ...... ...++++.|.. ....++...+.+|+.+|++...+..++.+++++. |.
T Consensus 78 ~~~~~~~~~~~~~~--~~~~v~tvp~~-~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~------~~---------- 138 (272)
T 3h1q_A 78 RELKAKVERLLGSE--LFQAATAIPPG-TVGRNAEACGHVVAGAGLELVTLVDEPVAAARAL------GI---------- 138 (272)
T ss_dssp HHHHHHHHHHSSSC--CCEEEEECCSC-C---CTTHHHHHHHHTTCEEEEEECHHHHHHHHH------TC----------
T ss_pred HHHHHHHHHhcCCc--cCeEEEEcCCC-CCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHH------cC----------
Confidence 9998632 111110 22455555544 4445556677799999999999999999999998 87
Q ss_pred cCCCCCceEEEEEeCCceEEEEEeecCeecccCeEEeeccHHHHHHHHHHHHh
Q psy7893 186 YNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHKLLQ 238 (691)
Q Consensus 186 ~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~a~~ri~iGG~~lt~yL~~lL~ 238 (691)
.+++|||+|+++|+++++.+|.++ ....+++||.++++.+.+.+.
T Consensus 139 ------~~~~viDiGggst~~~~~~~g~~~--~~~~~~~Gg~~~~~~l~~~l~ 183 (272)
T 3h1q_A 139 ------NDGIVVDIGGGTTGIAVIEKGKIT--ATFDEPTGGTHLSLVLAGSYK 183 (272)
T ss_dssp ------SSEEEEEECSSCEEEEEEETTEEE--EECCBSCCHHHHHHHHHHHHT
T ss_pred ------CCEEEEEECCCcEEEEEEECCEEE--EEecCCCcHHHHHHHHHHHhC
Confidence 778999999999999999999987 457889999999999988774
No 10
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.78 E-value=2.5e-19 Score=202.56 Aligned_cols=184 Identities=17% Similarity=0.101 Sum_probs=132.7
Q ss_pred ceEEEEcCCceEEEEEeCCCCCcEE--------EecceeecccCCCCcCCcceecccccccccc--c--cEEe----ccc
Q psy7893 28 LPIVFDNGAWCCRVGWASCEKPNLI--------FKNLIAKPRKERGKKDGETQVGNDISNIEAV--R--FQLK----TQF 91 (691)
Q Consensus 28 ~~vVID~GS~~~KaG~age~~P~~v--------iPs~vg~~~~~~~~~~~~~~vG~ea~~~~~~--~--~~l~----~Pi 91 (691)
.+|.||+||.++++|++.+..|.++ +||+|+.. . . ..++|++|...... + ..++ +|+
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~-~-~-----~~~vG~~A~~~~~~~p~~~~~~Kr~lg~p~ 75 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK-N-G-----ERLVGEVAKRQAITNPNTIISIKRHMGTDY 75 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES-S-S-----SEEESHHHHTTTTTCSSEEECGGGTTTSCC
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC-C-C-----cEEECHHHHHhHHhCCCcHHHHHHhcCCCc
Confidence 4899999999999999988888877 89999982 1 1 34899887543211 0 1112 266
Q ss_pred c---cCcccCHHHHHHHHHHHHhhcCCCCC---CCCCccEEEEecCCCchHHHHHHHHHHHHhcCCCeEeechhhHHhhh
Q psy7893 92 D---KNVVTHYDIQEQIFDYAFSHLSINTE---GNVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYGIDSLFSYQ 165 (691)
Q Consensus 92 ~---~G~I~nwd~~e~iw~~~f~~L~i~~~---~~~~~pvLltEp~~~~~~~re~l~EilFE~f~vp~v~~~~~alla~y 165 (691)
. +|. +|. .+.+|.++|.+|....+ ......+++|.|.......|+.+.+. ++..|++.+.++.++.+|++
T Consensus 76 ~~~~~g~--~~~-~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a-~~~AGl~~~~li~Ep~AAAl 151 (509)
T 2v7y_A 76 KVEIEGK--QYT-PQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDA-GRIAGLEVERIINEPTAAAL 151 (509)
T ss_dssp CEEETTE--EEC-HHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHH
T ss_pred EEEECCE--EEc-HHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEecCHHHHHH
Confidence 6 674 555 56677777654321100 00135799999999999999888875 58999999999999999998
Q ss_pred hccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEee--cCee-cccCeEEeeccHHHHHHHHHHHHhh
Q psy7893 166 YNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVI--NGCI-DASKAKRIDLGGFSVIHHLHKLLQL 239 (691)
Q Consensus 166 a~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~--dG~v-l~~a~~ri~iGG~~lt~yL~~lL~~ 239 (691)
++ |. ......+.+|||+|+++|+|+.+. +|.. +.......++||.++++.|.++|..
T Consensus 152 ay------~~-----------~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~ 211 (509)
T 2v7y_A 152 AY------GL-----------DKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVN 211 (509)
T ss_dssp HT------TG-----------GGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred HH------hh-----------ccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHH
Confidence 88 54 111347899999999999999775 3543 3333455689999999999988754
No 11
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.74 E-value=2.4e-18 Score=186.87 Aligned_cols=185 Identities=15% Similarity=0.069 Sum_probs=121.4
Q ss_pred ceEEEEcCCceEEEEEeCCCCCcEE--------EecceeecccCCCCcCCcceecccccccccc--ccEE----------
Q psy7893 28 LPIVFDNGAWCCRVGWASCEKPNLI--------FKNLIAKPRKERGKKDGETQVGNDISNIEAV--RFQL---------- 87 (691)
Q Consensus 28 ~~vVID~GS~~~KaG~age~~P~~v--------iPs~vg~~~~~~~~~~~~~~vG~ea~~~~~~--~~~l---------- 87 (691)
..|-||+||.++.+++..+..|.++ +||+|+..... ..++|.+|...... ...+
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~------~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~ 76 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDG------ETLVGQPAKRQAVTNPQNTLFAIKRLIGRR 76 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTS------CEEESHHHHTTSTTCGGGEEECGGGTTTCB
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCC------CEEECHHHHHhhhhCccceeehhHHhhCCC
Confidence 3678999999999999865555554 78988875422 23566554321100 0000
Q ss_pred -----------ecccc-------------cCc-ccCHHHHHHHHHHHHh----hcCCCCCCCCCccEEEEecCCCchHHH
Q psy7893 88 -----------KTQFD-------------KNV-VTHYDIQEQIFDYAFS----HLSINTEGNVNHPIVLTEPFLNPNYSR 138 (691)
Q Consensus 88 -----------~~Pi~-------------~G~-I~nwd~~e~iw~~~f~----~L~i~~~~~~~~pvLltEp~~~~~~~r 138 (691)
.+|+. +|. +.-.+....+++++.+ .++.. ...+++|.|...+...|
T Consensus 77 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~~~-----~~~~vitvP~~~~~~~r 151 (383)
T 1dkg_D 77 FQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEP-----VTEAVITVPAYFNDAQR 151 (383)
T ss_dssp SCSHHHHHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHSSC-----CCEEEECBCTTCCHHHH
T ss_pred CCcHHHHHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCC-----CCeEEEEECCCCCHHHH
Confidence 02332 232 2223444555555542 34422 24699999999999889
Q ss_pred HHHHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecC------
Q psy7893 139 SLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVING------ 212 (691)
Q Consensus 139 e~l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG------ 212 (691)
+.+.+. ++..|++.+.++.++++|+++. +.. ......+.+|||+|+++|+++.+..+
T Consensus 152 ~~~~~a-~~~aGl~~~~li~Ep~Aaa~~~------~~~----------~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~ 214 (383)
T 1dkg_D 152 QATKDA-GRIAGLEVKRIINEPTAAALAY------GLD----------KGTGNRTIAVYDLGGGTFDISIIEIDEVDGEK 214 (383)
T ss_dssp HHHHHH-HHHTTCEESCCCBHHHHHHHHH------TCC----------C-CCEEEEEEEEECSSCEEEEEEEEEC----C
T ss_pred HHHHHH-HHHcCCceEEEeccHHHHHHHH------Hhc----------cCCCCcEEEEEEcCCCeEEEEEEEEEecCCCC
Confidence 888775 6889999999999999999887 430 00134689999999999999977644
Q ss_pred ee-cccCeEEeeccHHHHHHHHHHHHhhh
Q psy7893 213 CI-DASKAKRIDLGGFSVIHHLHKLLQLK 240 (691)
Q Consensus 213 ~v-l~~a~~ri~iGG~~lt~yL~~lL~~~ 240 (691)
.. +.......++||.++|+.|.++|..+
T Consensus 215 ~~~v~~~~~~~~lGG~~id~~l~~~l~~~ 243 (383)
T 1dkg_D 215 TFEVLATNGDTHLGGEDFDSRLINYLVEE 243 (383)
T ss_dssp CCEEEEEEEESSCSHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 22 11123457899999999999887543
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.73 E-value=2.2e-17 Score=179.58 Aligned_cols=184 Identities=14% Similarity=0.063 Sum_probs=121.0
Q ss_pred CceEEEEcCCceEEEEEeCCCCCcEEE--------ecceeecccCCCCcCCcceecccccccccc-ccEEecccccCccc
Q psy7893 27 SLPIVFDNGAWCCRVGWASCEKPNLIF--------KNLIAKPRKERGKKDGETQVGNDISNIEAV-RFQLKTQFDKNVVT 97 (691)
Q Consensus 27 ~~~vVID~GS~~~KaG~age~~P~~vi--------Ps~vg~~~~~~~~~~~~~~vG~ea~~~~~~-~~~l~~Pi~~G~I~ 97 (691)
..+|.||+||.+++++++.+..|.++. ||+|+.... ..++|++|...... .....+.+++..-.
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-------~~~vG~~A~~~~~~~~~~~~~~~k~~lg~ 90 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDD-------ERLIGDAAKNQVAANPQNTIFDIKRLIGL 90 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSS-------CEEESHHHHHTGGGCGGGEECCGGGTTTC
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCC-------cEEecHHHHHhhHhCcccCHHHHHHHhCC
Confidence 457999999999999999877776542 888776543 23677776432110 01112222222111
Q ss_pred C---------------------------------------HHHHHHHHHHHHh----hcCCCCCCCCCccEEEEecCCCc
Q psy7893 98 H---------------------------------------YDIQEQIFDYAFS----HLSINTEGNVNHPIVLTEPFLNP 134 (691)
Q Consensus 98 n---------------------------------------wd~~e~iw~~~f~----~L~i~~~~~~~~pvLltEp~~~~ 134 (691)
+ -+....++.++.. .++.. -..+++|.|...+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~-----~~~~vitvP~~~~ 165 (394)
T 3qfu_A 91 KYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTK-----VTHAVVTVPAYFN 165 (394)
T ss_dssp CTTCHHHHHHHTTCSSEEEEETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSC-----CCEEEEEECTTCC
T ss_pred CCCcHHHHHHhhcCCeEEEcCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCC-----cceEEEEECCCCC
Confidence 1 1233334444332 23422 3579999999999
Q ss_pred hHHHHHHHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEee--cC
Q psy7893 135 NYSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVI--NG 212 (691)
Q Consensus 135 ~~~re~l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~--dG 212 (691)
...|+.+.+.+ +..|++.+.++.++.+|+++. |.. ......+.+|||+|+++|+++.+- +|
T Consensus 166 ~~~r~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~------~~~----------~~~~~~~vlV~D~Gggt~dvsv~~~~~~ 228 (394)
T 3qfu_A 166 DAQRQATKDAG-TIAGLNVLRIVNEPTAAAIAY------GLD----------KSDKEHQIIVYDLGGGTFDVSLLSIENG 228 (394)
T ss_dssp HHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHT------TTT----------SCSSCEEEEEEEECSSCEEEEEEEEETT
T ss_pred HHHHHHHHHHH-HHcCCceEEEecCHHHHHHHH------hhc----------cCCCCceEEEEEcCCCceeEEEEEEeCC
Confidence 99998777766 889999999999999999887 430 111236779999999999887763 44
Q ss_pred eec-ccCeEEeeccHHHHHHHHHHHHhh
Q psy7893 213 CID-ASKAKRIDLGGFSVIHHLHKLLQL 239 (691)
Q Consensus 213 ~vl-~~a~~ri~iGG~~lt~yL~~lL~~ 239 (691)
..- .......++||.++++.|.+++..
T Consensus 229 ~~~~~~~~~~~~lGG~~~d~~l~~~l~~ 256 (394)
T 3qfu_A 229 VFEVQATSGDTHLGGEDFDYKIVRQLIK 256 (394)
T ss_dssp EEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCCCChHHHHHHHHHHHHH
Confidence 332 222344789999999999888753
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.66 E-value=3.8e-16 Score=170.72 Aligned_cols=188 Identities=16% Similarity=0.063 Sum_probs=120.9
Q ss_pred CCceEEEEcCCceEEEEEeCCCCCcEE--------EecceeecccCCCCcCCcceecccccccccc-ccEEecccccCcc
Q psy7893 26 SSLPIVFDNGAWCCRVGWASCEKPNLI--------FKNLIAKPRKERGKKDGETQVGNDISNIEAV-RFQLKTQFDKNVV 96 (691)
Q Consensus 26 ~~~~vVID~GS~~~KaG~age~~P~~v--------iPs~vg~~~~~~~~~~~~~~vG~ea~~~~~~-~~~l~~Pi~~G~I 96 (691)
...+|.||+||.++++++..+..|.++ +||+|+.... ..++|.+|...... .....+.+++..-
T Consensus 22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-------~~~vG~~A~~~~~~~~~~~~~~~Kr~lg 94 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-------ERLIGDAAKNQVAMNPTNTIFDAKRLIG 94 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSS-------CEEETHHHHHTTTTCSTTEECCGGGTTT
T ss_pred cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCC-------CEEecHHHHHhhHhChhhhHHHHHHHhC
Confidence 356899999999999999876655432 3676665432 23677776432110 0112223332221
Q ss_pred cC---------------------------------------HHHHHHHHHHHHh----hcCCCCCCCCCccEEEEecCCC
Q psy7893 97 TH---------------------------------------YDIQEQIFDYAFS----HLSINTEGNVNHPIVLTEPFLN 133 (691)
Q Consensus 97 ~n---------------------------------------wd~~e~iw~~~f~----~L~i~~~~~~~~pvLltEp~~~ 133 (691)
.+ -+....++.++.. .++.. -..+++|.|...
T Consensus 95 ~~~~~~~~~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~-----~~~~vitvPa~~ 169 (404)
T 3i33_A 95 RKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGK-----VHSAVITVPAYF 169 (404)
T ss_dssp CCTTSHHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSC-----CCEEEEEECTTC
T ss_pred CCCCcHHHHHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccC-----CCcEEEEECCCC
Confidence 11 2333444444432 23432 247999999999
Q ss_pred chHHHHHHHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEee--c
Q psy7893 134 PNYSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVI--N 211 (691)
Q Consensus 134 ~~~~re~l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~--d 211 (691)
+...|+.+.+. ++..|++.+.++.++.+|+++. +... ........+.+|||+|+++|+++.+- +
T Consensus 170 ~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~------~~~~-------~~~~~~~~~vlV~D~GgGT~dvsv~~~~~ 235 (404)
T 3i33_A 170 NDSQRQATKDA-GTITGLNVLRIINEPTAAAIAY------GLDK-------KGCAGGEKNVLIFDLGGGTFDVSILTIED 235 (404)
T ss_dssp CHHHHHHHHHH-HHHHTCEEEEEEEHHHHHHHHT------TTTS-------SCSSSSCCEEEEEEECSSCEEEEEEEEET
T ss_pred CHHHHHHHHHH-HHHcCCCeEEEeccHHHHHHHH------Hhhc-------ccccCCCceEEEEECCCCcEEEEEEEEeC
Confidence 99999887666 7889999999999999999887 4300 00001347789999999999998773 4
Q ss_pred Cee-cccCeEEeeccHHHHHHHHHHHHhh
Q psy7893 212 GCI-DASKAKRIDLGGFSVIHHLHKLLQL 239 (691)
Q Consensus 212 G~v-l~~a~~ri~iGG~~lt~yL~~lL~~ 239 (691)
|.. +.......++||.++++.|.+.|..
T Consensus 236 ~~~~v~~~~~~~~lGG~~~d~~l~~~l~~ 264 (404)
T 3i33_A 236 GIFEVKSTAGDTHLGGEDFDNRMVSHLAE 264 (404)
T ss_dssp TEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 332 2233445789999999999887743
No 14
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.43 E-value=3e-12 Score=147.61 Aligned_cols=184 Identities=15% Similarity=0.052 Sum_probs=118.4
Q ss_pred ceEEEEcCCceEEEEEeCCCCCcEE--------EecceeecccCCCCcCCcceeccccccccc--cccE---E-------
Q psy7893 28 LPIVFDNGAWCCRVGWASCEKPNLI--------FKNLIAKPRKERGKKDGETQVGNDISNIEA--VRFQ---L------- 87 (691)
Q Consensus 28 ~~vVID~GS~~~KaG~age~~P~~v--------iPs~vg~~~~~~~~~~~~~~vG~ea~~~~~--~~~~---l------- 87 (691)
.+|-||+||.++.+++..+..|.++ +||+|+..... ..++|.+|..... .... +
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~------~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~ 76 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDG------ETLVGQPAKRQAVTNPQNTLFAIKRLIGRR 76 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTS------CEEESHHHHTTTTTCGGGEEECGGGTTTCB
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCC------cEEECHHHHHHhhhCCCCEeehhhHhhCCC
Confidence 4788999999999999866666655 68888774322 2356665532100 0000 0
Q ss_pred -----------ecccc-------------cCcccC-HHHHHHHHHHHHh----hcCCCCCCCCCccEEEEecCCCchHHH
Q psy7893 88 -----------KTQFD-------------KNVVTH-YDIQEQIFDYAFS----HLSINTEGNVNHPIVLTEPFLNPNYSR 138 (691)
Q Consensus 88 -----------~~Pi~-------------~G~I~n-wd~~e~iw~~~f~----~L~i~~~~~~~~pvLltEp~~~~~~~r 138 (691)
.+|+. +|.... .+....++.++.. .++.. -..+++|.|.......|
T Consensus 77 ~~d~~v~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~-----v~~~VitVPa~f~d~qr 151 (605)
T 2kho_A 77 FQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEP-----VTEAVITVPAYFNDAQR 151 (605)
T ss_dssp SSSTTHHHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHCSC-----CCEEEEEECTTCCHHHH
T ss_pred CCcHHHHHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCC-----CcEEEEEECCCCCHHHH
Confidence 01322 232222 2333444554432 35432 23689999998888888
Q ss_pred HHHHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeec------C
Q psy7893 139 SLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVIN------G 212 (691)
Q Consensus 139 e~l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~d------G 212 (691)
+.+.+. .+..|+..+.++.+|.+|+++. |.. ......+.+|+|+|+++|+|+.+.. |
T Consensus 152 ~a~~~A-~~~AGl~v~~li~EP~AAAlay------~l~----------~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g 214 (605)
T 2kho_A 152 QATKDA-GRIAGLEVKRIINEPTAAALAY------GLD----------KGTGNRTIAVYDLGGGTFDISIIEIDEVDGEK 214 (605)
T ss_dssp HHHHHH-HHTTTCEEEEEEEHHHHHHHHT------TTT----------SSSSEEEEEEEEECSSCEEEEEEEEECTTTSC
T ss_pred HHHHHH-HHHcCCceEEEecCHHHHHHHh------hhc----------ccCCCCEEEEEECCCCeEEEEEEEEEecCCCC
Confidence 777665 5778999999999999998887 540 0013478999999999999988853 4
Q ss_pred ee-cccCeEEeeccHHHHHHHHHHHHhh
Q psy7893 213 CI-DASKAKRIDLGGFSVIHHLHKLLQL 239 (691)
Q Consensus 213 ~v-l~~a~~ri~iGG~~lt~yL~~lL~~ 239 (691)
.. +.......++||.++++.|.+++..
T Consensus 215 ~~~v~a~~gd~~lGG~d~D~~l~~~l~~ 242 (605)
T 2kho_A 215 TFEVLATNGDTHLGGEDFDSRLINYLVE 242 (605)
T ss_dssp EEEEEEEEEESSCSGGGTHHHHHHHHHH
T ss_pred eEEEEEECCCCCccHHHHHHHHHHHHHH
Confidence 32 2222344689999999999887753
No 15
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.40 E-value=2.6e-12 Score=146.60 Aligned_cols=183 Identities=15% Similarity=0.051 Sum_probs=118.6
Q ss_pred ceEEEEcCCceEEEEEeCCCCCcE--------EEecceeecccCCCCcCCcceecccccccccc--ccE---Ee------
Q psy7893 28 LPIVFDNGAWCCRVGWASCEKPNL--------IFKNLIAKPRKERGKKDGETQVGNDISNIEAV--RFQ---LK------ 88 (691)
Q Consensus 28 ~~vVID~GS~~~KaG~age~~P~~--------viPs~vg~~~~~~~~~~~~~~vG~ea~~~~~~--~~~---l~------ 88 (691)
.+|-||+||.++.+++.....|.+ .+||+|+.... ..++|.+|...... ... ++
T Consensus 5 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~-------~~~vG~~A~~~~~~~p~~ti~~~KrllG~~ 77 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-------ERLIGDAAKNQVAMNPTNTVFDAKRLIGRR 77 (554)
T ss_dssp CCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSS-------CEEETHHHHTTTTTCGGGEECCGGGTTTCC
T ss_pred CEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCC-------cEEEcHHHHHhhhhChhhehHhhHHhcCCC
Confidence 479999999999999986554432 34888877532 23677765432100 000 00
Q ss_pred ------------cccc----cCcc---cC----------HHHHHHHHHHHHh----hcCCCCCCCCCccEEEEecCCCch
Q psy7893 89 ------------TQFD----KNVV---TH----------YDIQEQIFDYAFS----HLSINTEGNVNHPIVLTEPFLNPN 135 (691)
Q Consensus 89 ------------~Pi~----~G~I---~n----------wd~~e~iw~~~f~----~L~i~~~~~~~~pvLltEp~~~~~ 135 (691)
+|+. +|.. ++ .+....++.++.. .|+... ..+++|.|.....
T Consensus 78 ~~d~~v~~~~~~~p~~v~~~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v-----~~~VitVPa~f~~ 152 (554)
T 1yuw_A 78 FDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTV-----TNAVVTVPAYFND 152 (554)
T ss_dssp SSCSHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCC-----CEEEEEECTTCCH
T ss_pred CCcHHHHHHhhcCCeEEEecCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCC-----CeEEEEECCCCCH
Confidence 1110 1110 11 2334444444432 344322 3699999999888
Q ss_pred HHHHHHHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEee--cCe
Q psy7893 136 YSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVI--NGC 213 (691)
Q Consensus 136 ~~re~l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~--dG~ 213 (691)
..|+.+.+ +++..|+..+.++.+|.+|+++. |.. .......+.+|+|+|+++|+|+.+. +|.
T Consensus 153 ~qr~a~~~-A~~~AGl~~~~li~EP~AAAlay------~~~---------~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~ 216 (554)
T 1yuw_A 153 SQRQATKD-AGTIAGLNVLRIINEPTAAAIAY------GLD---------KKVGAERNVLIFDLGGGTFDVSILTIAAGI 216 (554)
T ss_dssp HHHHHHHH-HHHTTTCEEEEEEEHHHHHHHHT------TCS---------TTCSSCEEEEEEEECSSCEEEEEEEEETTE
T ss_pred HHHHHHHH-HHHHcCCCeEEEeCcHHHHHHHH------Hhh---------ccCCCCcEEEEEEcCCCeEEEEEEEEcCCc
Confidence 88887766 66888999999999999998887 530 0001247899999999999999875 565
Q ss_pred e-cccCeEEeeccHHHHHHHHHHHHh
Q psy7893 214 I-DASKAKRIDLGGFSVIHHLHKLLQ 238 (691)
Q Consensus 214 v-l~~a~~ri~iGG~~lt~yL~~lL~ 238 (691)
. +.......++||.++++.|.+++.
T Consensus 217 ~~v~a~~g~~~lGG~d~d~~l~~~l~ 242 (554)
T 1yuw_A 217 FEVKSTAGDTHLGGEDFDNRMVNHFI 242 (554)
T ss_dssp EEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 4 333445568999999999988774
No 16
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.30 E-value=9.2e-11 Score=136.71 Aligned_cols=187 Identities=11% Similarity=0.062 Sum_probs=117.8
Q ss_pred ceEEEEcCCceEEEEEeCCCCCcEE--------EecceeecccCCCCcCCcceecccccccc---------------cc-
Q psy7893 28 LPIVFDNGAWCCRVGWASCEKPNLI--------FKNLIAKPRKERGKKDGETQVGNDISNIE---------------AV- 83 (691)
Q Consensus 28 ~~vVID~GS~~~KaG~age~~P~~v--------iPs~vg~~~~~~~~~~~~~~vG~ea~~~~---------------~~- 83 (691)
.+|=||+||.++.+++.....|.++ +||+|+.... ..+||++|.... +.
T Consensus 3 ~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~-------~~~vG~~A~~~~~~~p~~ti~~~KrllG~~ 75 (675)
T 3d2f_A 3 TPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPK-------NRYLGETGKNKQTSNIKNTVANLKRIIGLD 75 (675)
T ss_dssp CCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSS-------SEEETHHHHHHHTTCGGGEECCHHHHTTCB
T ss_pred cEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCC-------cEEecHHHHHhhhhChHhHHHHHHHHhCCC
Confidence 3789999999999999765555433 4888876532 126776653210 00
Q ss_pred -------------ccEEecccccCccc-------------CHHHHHHHHHHHHh----hcCCCCCCCCCccEEEEecCCC
Q psy7893 84 -------------RFQLKTQFDKNVVT-------------HYDIQEQIFDYAFS----HLSINTEGNVNHPIVLTEPFLN 133 (691)
Q Consensus 84 -------------~~~l~~Pi~~G~I~-------------nwd~~e~iw~~~f~----~L~i~~~~~~~~pvLltEp~~~ 133 (691)
.+.+ .|..+|.+. -.+....++.++.. .++... ..+++|.|...
T Consensus 76 ~~d~~v~~~~~~~p~~v-~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v-----~~~VITVPa~f 149 (675)
T 3d2f_A 76 YHHPDFEQESKHFTSKL-VELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANI-----TDVCIAVPPWY 149 (675)
T ss_dssp TTCTTHHHHHTTCCSEE-EECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCC-----CEEEEEECTTC
T ss_pred CCcHHHHHHHhhCCeeE-EEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCc-----ceEEEEECCCC
Confidence 0011 122234321 12333444444432 344222 36899999988
Q ss_pred chHHHHHHHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEee--c
Q psy7893 134 PNYSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVI--N 211 (691)
Q Consensus 134 ~~~~re~l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~--d 211 (691)
....|+.+.+ +.+..|+..+.++.++.+|++++ |... .-+........+.+|+|+|+++|+|+.+. +
T Consensus 150 ~~~qR~a~~~-Aa~~AGl~~~~li~EP~AAAlay------gl~~----~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~ 218 (675)
T 3d2f_A 150 TEEQRYNIAD-AARIAGLNPVRIVNDVTAAGVSY------GIFK----TDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKK 218 (675)
T ss_dssp CHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHHHH------HHHC----SCCCCSSSCCEEEEEEEECSSCEEEEEEEEET
T ss_pred CHHHHHHHHH-HHHHcCCceEEEEcchHHHHHHH------hhhc----cccccccCCCcEEEEEEcCCCcEEEEEEEecC
Confidence 8888887776 55788999999999999998876 4300 00000002347899999999999998874 5
Q ss_pred Cee-cccCeEEeeccHHHHHHHHHHHHh
Q psy7893 212 GCI-DASKAKRIDLGGFSVIHHLHKLLQ 238 (691)
Q Consensus 212 G~v-l~~a~~ri~iGG~~lt~yL~~lL~ 238 (691)
|.. +.......++||.++++.|.++|.
T Consensus 219 g~~~V~a~~gd~~lGG~d~D~~l~~~l~ 246 (675)
T 3d2f_A 219 GQLKVLGTACDKHFGGRDFDLAITEHFA 246 (675)
T ss_dssp TEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred CeEEEEEEcCCCCccHHHHHHHHHHHHH
Confidence 654 333334578999999999988775
No 17
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.30 E-value=3.1e-11 Score=132.09 Aligned_cols=121 Identities=9% Similarity=0.005 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHh----hcCCCCCCCCCccEEEEecCCCchHHHHHHHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCc
Q psy7893 100 DIQEQIFDYAFS----HLSINTEGNVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGV 175 (691)
Q Consensus 100 d~~e~iw~~~f~----~L~i~~~~~~~~pvLltEp~~~~~~~re~l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~ 175 (691)
+....++.++.+ .++.. ...+++|.|.......|+.+.+. .+..|+..+.++.++.+|+++. +.
T Consensus 129 ev~~~~L~~l~~~a~~~~~~~-----~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~------~~ 196 (409)
T 4gni_A 129 EIATRYLRRLVGAASEYLGKK-----VTSAVITIPTNFTEKQKAALIAA-AAAADLEVLQLISEPAAAVLAY------DA 196 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHTSC-----CCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHT------TC
T ss_pred HHHHHHHHHHHHHHHHHhCCC-----CCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEEcCHHHHHHHH------hc
Confidence 445556666553 34432 24699999998888877766555 5677999999999999999888 43
Q ss_pred cccccccccccCCCCCceEEEEEeCCceEEEEEe--ecCee-cccCeEEeeccHHHHHHHHHHHHhhh
Q psy7893 176 IISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPV--INGCI-DASKAKRIDLGGFSVIHHLHKLLQLK 240 (691)
Q Consensus 176 ~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV--~dG~v-l~~a~~ri~iGG~~lt~yL~~lL~~~ 240 (691)
. ........+.+|||+|+++|.++.+ .+|.. +.......++||.++++.|.+++..+
T Consensus 197 ~--------~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~ 256 (409)
T 4gni_A 197 R--------PEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKE 256 (409)
T ss_dssp --------------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHH
T ss_pred c--------cccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHH
Confidence 0 0011234789999999999999876 23322 11222347899999999998887543
No 18
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.29 E-value=5.3e-11 Score=128.63 Aligned_cols=96 Identities=9% Similarity=0.081 Sum_probs=71.0
Q ss_pred HHHHHhcCCCeEeechhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecCeecccCeEEe
Q psy7893 143 ELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRI 222 (691)
Q Consensus 143 EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~a~~ri 222 (691)
.-+++..|+.-+.+..++++++++. |.. .......+.+|||+|+++|+|+.+.+|.++ ....+
T Consensus 157 ~~~~~~aGl~~~~i~~ep~Aaa~~~------~~~---------~~~~~~~~~~vvDiGggttdi~i~~~g~~~--~~~~~ 219 (377)
T 2ych_A 157 LEALRGAGLVPVVLDVKPFAGLYPL------EAR---------LAEEPDRVFLVLDIGAESTSLVLLRGDKPL--AVRVL 219 (377)
T ss_dssp HHHHHHTTCEEEEEEEHHHHTTGGG------HHH---------HHTSTTCEEEEEEECSSCEEEEEEETTEEE--EEEEE
T ss_pred HHHHHHCCCceEEEecchHHHHHHH------Hhh---------cccccCCeEEEEEECCCcEEEEEEECCEEE--EEEee
Confidence 3455888999999999999987776 320 000112567999999999999999999987 45788
Q ss_pred eccHHHHHHHHHHHHhhhCCCCCCCCChHHHHHHHHHheeee
Q psy7893 223 DLGGFSVIHHLHKLLQLKYPSHINSITPSRSEELLWDYGFVA 264 (691)
Q Consensus 223 ~iGG~~lt~yL~~lL~~~~~~~~~~~~~~~~e~IKe~~cyva 264 (691)
++||.++|+.|.+.+ .++...++.+|+.+|++.
T Consensus 220 ~~GG~~i~~~i~~~~---------~~~~~~aE~~K~~~~~~~ 252 (377)
T 2ych_A 220 TLSGKDFTEAIARSF---------NLDLLAAEEVKRTYGMAT 252 (377)
T ss_dssp SCSHHHHHHHHHHHT---------TCCHHHHHHHHHHTC---
T ss_pred echHHHHHHHHHHHh---------CCCHHHHHHHHhhccccc
Confidence 999999999988733 234567888888887654
No 19
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.12 E-value=2.7e-09 Score=123.04 Aligned_cols=184 Identities=14% Similarity=0.041 Sum_probs=116.1
Q ss_pred ceEEEEcCCceEEEEEeCCCCCcE--------EEecceeecccCCCCcCCcceecccccccccc--c---cEEe------
Q psy7893 28 LPIVFDNGAWCCRVGWASCEKPNL--------IFKNLIAKPRKERGKKDGETQVGNDISNIEAV--R---FQLK------ 88 (691)
Q Consensus 28 ~~vVID~GS~~~KaG~age~~P~~--------viPs~vg~~~~~~~~~~~~~~vG~ea~~~~~~--~---~~l~------ 88 (691)
.+|-||+||.++.+++.....|.+ .+||+|+..... ..++|..|...... . ..++
T Consensus 3 ~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~------~~~vG~~A~~~~~~~p~~ti~~~KrllG~~ 76 (605)
T 4b9q_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDG------CTLVGQPAKRQAVTNPQNTLFAIKRLIGRR 76 (605)
T ss_dssp CEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTS------CEEESHHHHHTTTTCGGGEECCGGGTTTCB
T ss_pred cEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCC------cEEecHHHHHHHHhCCCcEehhhHHhhCCC
Confidence 478999999999999875544443 247888775332 23566654321100 0 0000
Q ss_pred ------------cc--------------cccCcccCHHHHHHHHHHHHh----hcCCCCCCCCCccEEEEecCCCchHHH
Q psy7893 89 ------------TQ--------------FDKNVVTHYDIQEQIFDYAFS----HLSINTEGNVNHPIVLTEPFLNPNYSR 138 (691)
Q Consensus 89 ------------~P--------------i~~G~I~nwd~~e~iw~~~f~----~L~i~~~~~~~~pvLltEp~~~~~~~r 138 (691)
.| +....+.--+....++.++.+ .|+... ..+++|.|.......|
T Consensus 77 ~~d~~v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~~v-----~~~VITVPa~f~~~qr 151 (605)
T 4b9q_A 77 FQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPV-----TEAVITVPAYFNDAQR 151 (605)
T ss_dssp TTSHHHHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTSCC-----CEEEEEECTTCCHHHH
T ss_pred CCCHHHHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCCCC-----CeEEEEECCCCCHHHH
Confidence 01 111122223455556665543 455433 3689999988888877
Q ss_pred HHHHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecCe-----
Q psy7893 139 SLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGC----- 213 (691)
Q Consensus 139 e~l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~----- 213 (691)
+.+. -..+..|+..+.++.++.+|++++ |.. ......+-+|+|+|++++.|+.+--+.
T Consensus 152 ~a~~-~Aa~~AGl~v~~li~EP~AAAlay------gl~----------~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~ 214 (605)
T 4b9q_A 152 QATK-DAGRIAGLEVKRIINEPTAAALAY------GLD----------KGTGNRTIAVYDLGGGAFDISIIEIDEVDGEK 214 (605)
T ss_dssp HHHH-HHHHHTTCEEEEEEEHHHHHHHHH------HTT----------SCCSSEEEEEEEECSSCEEEEEEEEEESSSCE
T ss_pred HHHH-HHHHHcCCceEEEeCcHHHHHHHh------hhh----------ccCCCCEEEEEECCCCeEEEEEEEEecCCCCc
Confidence 6655 455778999999999999998887 530 001236789999999999998875332
Q ss_pred e--cccCeEEeeccHHHHHHHHHHHHhh
Q psy7893 214 I--DASKAKRIDLGGFSVIHHLHKLLQL 239 (691)
Q Consensus 214 v--l~~a~~ri~iGG~~lt~yL~~lL~~ 239 (691)
. +........+||.++++.|.++|..
T Consensus 215 ~~evla~~gd~~lGG~d~D~~l~~~l~~ 242 (605)
T 4b9q_A 215 TFEVLATNGDTHLGGEDFDSRLINYLVE 242 (605)
T ss_dssp EEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCCCcChHHHHHHHHHHHHH
Confidence 1 1122233578999999999887754
No 20
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.11 E-value=4.6e-10 Score=120.67 Aligned_cols=185 Identities=15% Similarity=0.057 Sum_probs=128.3
Q ss_pred ceEEEEcCCceEEEEEeCCCCCcEEEecceeecccCCC-------------C----cCCcceeccccccccccccEEecc
Q psy7893 28 LPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKERG-------------K----KDGETQVGNDISNIEAVRFQLKTQ 90 (691)
Q Consensus 28 ~~vVID~GS~~~KaG~age~~P~~viPs~vg~~~~~~~-------------~----~~~~~~vG~ea~~~~~~~~~l~~P 90 (691)
-.|-||+|++++|+-. ++ .-.+.+||+|+....... . ....++||++|. +|
T Consensus 22 ~~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~vG~~A~----------~~ 89 (346)
T 2fsj_A 22 VVVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASGNNIR----------VP 89 (346)
T ss_dssp EEEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCSSCCB----------CC
T ss_pred EEEEEecCCcceeEEe-cC-CCEEEecceeeeccccccCcCcceEEEEecccccccCCcEEEEcccee----------cc
Confidence 3689999999999853 33 346789999988654310 0 012356776653 79
Q ss_pred cccCcccCHHHHHHHHHHHHhhcCCCCCCCCCccEE--EEecCCCchHHHHHHHHHHHHh-------------cCCCeEe
Q psy7893 91 FDKNVVTHYDIQEQIFDYAFSHLSINTEGNVNHPIV--LTEPFLNPNYSRSLMSELLFEC-------------YQVPSVC 155 (691)
Q Consensus 91 i~~G~I~nwd~~e~iw~~~f~~L~i~~~~~~~~pvL--ltEp~~~~~~~re~l~EilFE~-------------f~vp~v~ 155 (691)
+..|.+.+ +..+.++.+.+.+...... .....++ ++-|.......|+.+.+.+... +++..|.
T Consensus 90 l~~~~~~~-~~~~~ll~~~l~~~~~~~~-~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~ 167 (346)
T 2fsj_A 90 QGDGRLAS-KEAFPLIAAALWESGIHND-GSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLI 167 (346)
T ss_dssp SSTTCTTS-TTTHHHHHHHHHHHCCCC----CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEE
T ss_pred cCCCcccC-hhHHHHHHHHHHHhhhccC-CCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEE
Confidence 99999999 8888888888865431110 0133477 7777766666777776664432 2356788
Q ss_pred echhhHHhhhhccCCCCCCccccccccccccCCCC-CceEEEEEeCCceEEEEEee--cCeecccCeEEeeccHHHHHHH
Q psy7893 156 YGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWE-GQSGVIISCGYQCTHVIPVI--NGCIDASKAKRIDLGGFSVIHH 232 (691)
Q Consensus 156 ~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~-~~sgLVVDiG~~~T~IvPV~--dG~vl~~a~~ri~iGG~~lt~y 232 (691)
+++++.+|+++... +. ...+ ..+.+|||+|+++|.|+.+. +|.++......+++||.++++.
T Consensus 168 li~Ep~AAa~~~l~----~~-----------~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~ 232 (346)
T 2fsj_A 168 MRPQGVGAALYLLN----QG-----------IIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISA 232 (346)
T ss_dssp EEETTHHHHHHHHH----HT-----------SSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHH
T ss_pred EEccHHHHHHHhhc----cc-----------cccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHH
Confidence 99999998887300 10 0011 14459999999999999998 7877766568889999999999
Q ss_pred HHHHHhhhC
Q psy7893 233 LHKLLQLKY 241 (691)
Q Consensus 233 L~~lL~~~~ 241 (691)
|.+.++.+|
T Consensus 233 I~~~i~~~~ 241 (346)
T 2fsj_A 233 LSRKIAKET 241 (346)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 988887664
No 21
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.09 E-value=6.3e-09 Score=114.72 Aligned_cols=91 Identities=18% Similarity=0.140 Sum_probs=71.3
Q ss_pred HHHhcCCCeEeechhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecCeecccCeEEeec
Q psy7893 145 LFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDL 224 (691)
Q Consensus 145 lFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~a~~ri~i 224 (691)
+++.-|+.-..+..+|++++++. +. +.....+.+|||+|+++|+++.+.+|.++ ....+++
T Consensus 176 ~~~~AGL~v~~lv~ep~Aaa~a~------l~-----------~~~~~~gv~vvDiGggttdisi~~~g~~~--~~~~i~~ 236 (419)
T 4a2a_A 176 FLQDTVKSPFQLKSSLVSTAEGV------LT-----------TPEKDRGVVVVNLGYNFTGLIAYKNGVPI--KISYVPV 236 (419)
T ss_dssp HHHTTSCSCEEEEEHHHHHHHHH------CC-----------HHHHHHCEEEEEECSSSEEEEEEETTEEE--EEEEESC
T ss_pred HHHHcCCcEEEEEEHHHHHHHHh------hc-----------cccccCCEEEEEECCCcEEEEEEECCEEE--EEEeccc
Confidence 45777888888888998888776 32 00112478999999999999999999987 4567899
Q ss_pred cHHHHHHHHHHHHhhhCCCCCCCCChHHHHHHHHHheee
Q psy7893 225 GGFSVIHHLHKLLQLKYPSHINSITPSRSEELLWDYGFV 263 (691)
Q Consensus 225 GG~~lt~yL~~lL~~~~~~~~~~~~~~~~e~IKe~~cyv 263 (691)
||+++|+.|...+. +....+|.+|.+++..
T Consensus 237 GG~~it~dIa~~l~---------~~~~~AE~iK~~~g~a 266 (419)
T 4a2a_A 237 GMKHVIKDVSAVLD---------TSFEESERLIITHGNA 266 (419)
T ss_dssp CHHHHHHHHHHHHT---------CCHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHC---------CCHHHHHHHHHHhccC
Confidence 99999999987663 3456799999988754
No 22
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=98.80 E-value=1.8e-08 Score=107.55 Aligned_cols=185 Identities=12% Similarity=0.063 Sum_probs=114.3
Q ss_pred CceEEEEcCCceEEEEEe--C---CCCCcEEEecceeecccCC------C----CcCCcceeccccccccccccEEeccc
Q psy7893 27 SLPIVFDNGAWCCRVGWA--S---CEKPNLIFKNLIAKPRKER------G----KKDGETQVGNDISNIEAVRFQLKTQF 91 (691)
Q Consensus 27 ~~~vVID~GS~~~KaG~a--g---e~~P~~viPs~vg~~~~~~------~----~~~~~~~vG~ea~~~~~~~~~l~~Pi 91 (691)
.-.|-||+|-+++|+-.. + +..-+..|||.++...... . .....++||+.+... -.
T Consensus 7 ~~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~~~---------~~ 77 (329)
T 4apw_A 7 EYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGVED---------SS 77 (329)
T ss_dssp EEEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSSSC---------SG
T ss_pred ceEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccccc---------cc
Confidence 336889999999998653 2 1123467999998754321 0 012235777754311 11
Q ss_pred ccCcccCHHHHHHHHHHHH-hhcCCCCCCCCCccEEEEecCCCch--HHHHHHHHHHHHh-------------cCCCeEe
Q psy7893 92 DKNVVTHYDIQEQIFDYAF-SHLSINTEGNVNHPIVLTEPFLNPN--YSRSLMSELLFEC-------------YQVPSVC 155 (691)
Q Consensus 92 ~~G~I~nwd~~e~iw~~~f-~~L~i~~~~~~~~pvLltEp~~~~~--~~re~l~EilFE~-------------f~vp~v~ 155 (691)
.... +-+....++-.++ ..+..... ....+++.-|...-. ..|+.+.+.+-.. +.+..|.
T Consensus 78 ~~~k--~~~~~~~L~l~Aia~~~~~~~~--~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~ 153 (329)
T 4apw_A 78 ETSK--TNLIHKLAAYTAITQVLDSNKN--NKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDIT 153 (329)
T ss_dssp GGCC--CTTHHHHHHHHHHHTTCCSSSE--EEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEE
T ss_pred cCCc--CchhHHHHHHHHHHHHhccccC--ceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEE
Confidence 1111 2234444555555 33432211 122344444433322 2466666665521 2245688
Q ss_pred echhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecCeecccCeEEeeccHHHHHHHHHH
Q psy7893 156 YGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHK 235 (691)
Q Consensus 156 ~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~a~~ri~iGG~~lt~yL~~ 235 (691)
+.++++.+++.. .. ..+..+.+|||+|+++|.++.+.+|.++......+++||..+++.+.+
T Consensus 154 v~pe~~ga~~~~------~~------------~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~ 215 (329)
T 4apw_A 154 IKAEGSGVLFLE------QE------------NFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGD 215 (329)
T ss_dssp EEEHHHHHHHHS------CC------------CCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHT
T ss_pred EEeccHHHHhhc------ch------------hhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHH
Confidence 899999988775 11 112367899999999999999999999877778899999999999998
Q ss_pred HHhh-hCC
Q psy7893 236 LLQL-KYP 242 (691)
Q Consensus 236 lL~~-~~~ 242 (691)
.|+. +|.
T Consensus 216 ~l~~~~~g 223 (329)
T 4apw_A 216 ALTDLNNG 223 (329)
T ss_dssp SSSSCSSC
T ss_pred HHHhhccC
Confidence 8876 553
No 23
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=98.18 E-value=6.1e-06 Score=87.22 Aligned_cols=75 Identities=17% Similarity=-0.014 Sum_probs=58.3
Q ss_pred hcCCCeEeechhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecCee-cccCeEEeeccH
Q psy7893 148 CYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCI-DASKAKRIDLGG 226 (691)
Q Consensus 148 ~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~v-l~~a~~ri~iGG 226 (691)
.+++..+.+.+++++|+++. +. +.....+.+|||+|+++|+++.+.+|.+ +......+++||
T Consensus 137 ~~~i~~v~~~~e~~aa~~~~------~~-----------~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg 199 (320)
T 2zgy_A 137 TFTIKDVKVMPESIPAGYEV------LQ-----------ELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGV 199 (320)
T ss_dssp CCEEEEEEEEESSHHHHHHH------HH-----------HSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCT
T ss_pred EEEEEEEEEecCcHHHHHhh------hc-----------cccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccH
Confidence 44567888899999988876 31 1112368899999999999999998876 433456779999
Q ss_pred HHHHHHHHHHHhh
Q psy7893 227 FSVIHHLHKLLQL 239 (691)
Q Consensus 227 ~~lt~yL~~lL~~ 239 (691)
.++++.+.+.|..
T Consensus 200 ~~~~~~I~~~l~~ 212 (320)
T 2zgy_A 200 SLVTSAVKDALSL 212 (320)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988864
No 24
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=98.17 E-value=2.5e-05 Score=84.08 Aligned_cols=196 Identities=13% Similarity=0.099 Sum_probs=116.2
Q ss_pred ceEEEEcCCceEEEEEeCCCCCcEEEecceeecccCCC------C------------cCCc-ceeccccccccccccEEe
Q psy7893 28 LPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKERG------K------------KDGE-TQVGNDISNIEAVRFQLK 88 (691)
Q Consensus 28 ~~vVID~GS~~~KaG~age~~P~~viPs~vg~~~~~~~------~------------~~~~-~~vG~ea~~~~~~~~~l~ 88 (691)
-.|-||+|-+++|+ ..+. . .+.|||.|+....... . .... ++||+.|..... ...
T Consensus 5 ~iigiD~G~~~~K~-~~~~-~-~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~~~---~~~ 78 (355)
T 3js6_A 5 YVMALDFGNGFVKG-KIND-E-KFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTN---TGK 78 (355)
T ss_dssp EEEEEEECSSEEEE-EETT-E-EEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCS---CCE
T ss_pred EEEEEEcCCCcEEE-ecCC-e-EEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhhcCc---ccc
Confidence 46889999999996 5544 2 5789999986543210 0 1123 678877643211 111
Q ss_pred ccc-ccCcccCHHHHHHHHHHHHhhcCCC-CCCCCCccEEEEecCCCchHHH-HHHHHHHHHh-----------cCCCeE
Q psy7893 89 TQF-DKNVVTHYDIQEQIFDYAFSHLSIN-TEGNVNHPIVLTEPFLNPNYSR-SLMSELLFEC-----------YQVPSV 154 (691)
Q Consensus 89 ~Pi-~~G~I~nwd~~e~iw~~~f~~L~i~-~~~~~~~pvLltEp~~~~~~~r-e~l~EilFE~-----------f~vp~v 154 (691)
+.+ ......+-+ ...++-.++..+..+ +....+..|++.-|.......+ +.+.+.+-.. +.+..|
T Consensus 79 ~~~~~~~k~~~~~-~~iL~l~Ala~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V 157 (355)
T 3js6_A 79 DTASTNDRYDIKS-FKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGV 157 (355)
T ss_dssp ECCCSTTGGGSHH-HHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEE
T ss_pred cccccCCcccCHH-HHHHHHHHHHHHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEE
Confidence 222 333443333 333333444222111 1110122344444544444444 4566665422 223688
Q ss_pred eechhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecCeecccCeEEeeccHHHHHHHHH
Q psy7893 155 CYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLH 234 (691)
Q Consensus 155 ~~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~a~~ri~iGG~~lt~yL~ 234 (691)
.+.++++.|+++. +... +. ..........+|||+|+++|.++.+.+|.++......+++||..+++.+.
T Consensus 158 ~v~pE~~~a~~~~------~~~~--~~---~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~ 226 (355)
T 3js6_A 158 KIVAQPMGTLLDL------NMEN--GK---VFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIA 226 (355)
T ss_dssp EEEEHHHHHHHHT------TEET--TE---ECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHH
T ss_pred EEEeCcHHHHHHH------HHcc--Cc---cccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHH
Confidence 9999999999987 4300 00 00000247889999999999999999999998888899999999999999
Q ss_pred HHHhhhC
Q psy7893 235 KLLQLKY 241 (691)
Q Consensus 235 ~lL~~~~ 241 (691)
+.|+.++
T Consensus 227 ~~l~~~~ 233 (355)
T 3js6_A 227 SHVSKKS 233 (355)
T ss_dssp HHTC---
T ss_pred HHHHHhc
Confidence 9997663
No 25
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=97.54 E-value=0.001 Score=74.31 Aligned_cols=98 Identities=12% Similarity=-0.017 Sum_probs=68.7
Q ss_pred HHHHHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecCeeccc
Q psy7893 138 RSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDAS 217 (691)
Q Consensus 138 re~l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~ 217 (691)
-+++.+.+=.+++++--.=..++++|.+++-. .........+||+|+++|++.-+.+|..+
T Consensus 370 m~NI~~cVer~~gL~veV~g~ep~AAglaaLT-----------------eDE~eLGvaiIDmGGGTTd~sVf~~G~lv-- 430 (610)
T 2d0o_A 370 MAMIAREIEQKLNIDVQIGGAEAEAAILGALT-----------------TPGTTRPLAILDLGAGSTDASIINPKGDI-- 430 (610)
T ss_dssp HHHHHHHHHHHHCCEEEEEEEHHHHHHHHHTT-----------------STTCCSSEEEEEECSSEEEEEEECTTCCE--
T ss_pred HHHHHHHHHhccCCcceeccccHHHhhhhhcC-----------------CCCCcCCeEEEEeCCCcceEEEEcCCcEE--
Confidence 34455555455455211112677777777622 22234677999999999999999999887
Q ss_pred CeEEeeccHHHHHHHHHHHHhhhCCCCCCCCChHHHHHHHHHheee
Q psy7893 218 KAKRIDLGGFSVIHHLHKLLQLKYPSHINSITPSRSEELLWDYGFV 263 (691)
Q Consensus 218 a~~ri~iGG~~lt~yL~~lL~~~~~~~~~~~~~~~~e~IKe~~cyv 263 (691)
....+++||.++|..+..-|... +...+|.||. ++.+
T Consensus 431 ~a~~ip~gG~~VT~DIA~~Lgt~--------d~~~AErIK~-YG~A 467 (610)
T 2d0o_A 431 IATHLAGAGDMVTMIIARELGLE--------DRYLAEEIKK-YPLA 467 (610)
T ss_dssp EEEEEECSHHHHHHHHHHHHTCC--------CHHHHHHHHH-SCEE
T ss_pred EEEEeccchHHHHHHHHHHhCCC--------CHHHHHHhcc-cCce
Confidence 66788999999999999888532 2577999998 6544
No 26
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=97.34 E-value=0.00078 Score=75.37 Aligned_cols=78 Identities=15% Similarity=-0.001 Sum_probs=60.2
Q ss_pred hhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecCeecccCeEEeeccHHHHHHHHHHHH
Q psy7893 158 IDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHKLL 237 (691)
Q Consensus 158 ~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~a~~ri~iGG~~lt~yL~~lL 237 (691)
.++++|.+++-. .........+||+|+++|++.-+.+|..+ ....+++||.++|..+..-|
T Consensus 392 ~ep~AA~laaLT-----------------edE~elGvaiIDmGgGTTd~sVf~~g~lv--~a~~ip~gG~~VT~DIA~~L 452 (607)
T 1nbw_A 392 VEANMAIAGALT-----------------TPGCAAPLAILDLGAGSTDAAIVNAEGQI--TAVHLAGAGNMVSLLIKTEL 452 (607)
T ss_dssp CHHHHHHHHHTT-----------------STTCCSSEEEEEECSSEEEEEEECSSSCE--EEEEEECCHHHHHHHHHHHH
T ss_pred ccHHHhhhhhcC-----------------CCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccchHHHHHHHHHHh
Confidence 677777777622 22234677999999999999999999887 66788999999999999888
Q ss_pred hhhCCCCCCCCChHHHHHHHHHheee
Q psy7893 238 QLKYPSHINSITPSRSEELLWDYGFV 263 (691)
Q Consensus 238 ~~~~~~~~~~~~~~~~e~IKe~~cyv 263 (691)
... +...+|.||. ++.+
T Consensus 453 g~~--------d~~~AErIK~-YG~A 469 (607)
T 1nbw_A 453 GLE--------DLSLAEAIKK-YPLA 469 (607)
T ss_dssp TCS--------CHHHHHHHHH-SCEE
T ss_pred CCC--------CHHHHHHhcc-cCce
Confidence 532 2567999998 6544
No 27
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=94.97 E-value=0.17 Score=53.24 Aligned_cols=79 Identities=6% Similarity=0.016 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHhcCCCeEeec--hhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecCe
Q psy7893 136 YSRSLMSELLFECYQVPSVCYG--IDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGC 213 (691)
Q Consensus 136 ~~re~l~EilFE~f~vp~v~~~--~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~ 213 (691)
.+++.+.+.+.+..|++-=.+. ..+.+++.|... +. + ...+++|||+|.++|.++-+-+|.
T Consensus 97 ~N~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~----~l-----------~--~~~~~lvvDIGGGStEl~~~~~~~ 159 (315)
T 1t6c_A 97 KNAEEFLERVKREVGLVVEVITPEQEGRYAYLAVAY----SL-----------K--PEGEVCVVDQGGGSTEYVFGKGYK 159 (315)
T ss_dssp TTHHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHH----HT-----------C--CCSEEEEEEEETTEEEEEEEETTE
T ss_pred cCHHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHh----hc-----------c--cCCCEEEEEeCCCcEEEEEEeCCc
Confidence 4566777778888888643332 335556555411 11 0 126799999999999999988888
Q ss_pred ecccCeEEeeccHHHHHHHH
Q psy7893 214 IDASKAKRIDLGGFSVIHHL 233 (691)
Q Consensus 214 vl~~a~~ri~iGG~~lt~yL 233 (691)
+. ....+++|+-.+++.+
T Consensus 160 ~~--~~~Sl~~G~v~l~e~~ 177 (315)
T 1t6c_A 160 VR--EVISLPIGIVNLTETF 177 (315)
T ss_dssp EE--EEEEECCCHHHHHHHH
T ss_pred ee--eEEEEeccHHHHHHHh
Confidence 75 5678999999998875
No 28
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=94.12 E-value=0.16 Score=54.04 Aligned_cols=84 Identities=10% Similarity=0.008 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHhcCCCeEee--chhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeec--
Q psy7893 136 YSRSLMSELLFECYQVPSVCY--GIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVIN-- 211 (691)
Q Consensus 136 ~~re~l~EilFE~f~vp~v~~--~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~d-- 211 (691)
.+++...+.+.+..|++-=.+ ..++.+++.|... +. . .......++|||+|+++|.++-+.+
T Consensus 102 ~N~~~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~----~~---------~-~~~~~~~~lviDIGGGStel~~~~~~~ 167 (343)
T 3cer_A 102 ENREEFEDEIERILGVRPEVIPGTEEADLSFLGATS----VV---------N-RDDLPAPYLVVDLGGGSTELVIGGDGV 167 (343)
T ss_dssp TTHHHHHHHHHHHHSSCCEECCHHHHHHHHHHHHHS----SC---------C-TTTCCSSEEEEEECSSCEEEEECCCSS
T ss_pred cCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHh----hC---------c-cccccCCEEEEEeCCCceEEEEeecCc
Confidence 345667777777778763222 2346666666521 11 0 0001256999999999999988766
Q ss_pred Ceec--ccCeEEeeccHHHHHHHH
Q psy7893 212 GCID--ASKAKRIDLGGFSVIHHL 233 (691)
Q Consensus 212 G~vl--~~a~~ri~iGG~~lt~yL 233 (691)
+.+. ......+++|+..+++.+
T Consensus 168 ~~~~~~~~~~~SlplG~v~lt~~~ 191 (343)
T 3cer_A 168 SAPTTQVQGAFSMNIGSVRMTERH 191 (343)
T ss_dssp SSCTTSCSEEEEESCCHHHHHHHT
T ss_pred cCcccccceeEEEehhHHHHHHHh
Confidence 3331 124678999999999875
No 29
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=94.09 E-value=0.28 Score=51.45 Aligned_cols=80 Identities=10% Similarity=0.101 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHhcCCCeEee--chhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecCe
Q psy7893 136 YSRSLMSELLFECYQVPSVCY--GIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGC 213 (691)
Q Consensus 136 ~~re~l~EilFE~f~vp~v~~--~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~ 213 (691)
.++....+.+.+..|++-=.+ ..++-+++.|... +. ......++|||+|.++|.++-+-+|.
T Consensus 89 ~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~----~~------------~~~~~~~lviDIGGGStEl~~~~~~~ 152 (315)
T 3mdq_A 89 SNKQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQ----AV------------PMEDHISLAMDIGGGSVEFIIGNKNE 152 (315)
T ss_dssp TTHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH----HS------------CCTTCCEEEEEECSSCEEEEEECSSC
T ss_pred cCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHh----cC------------CCCCCCEEEEEeCCCceEEEEEECCe
Confidence 345567777777788874323 2445666665411 11 01125799999999999999998887
Q ss_pred ecccCeEEeeccHHHHHHHH
Q psy7893 214 IDASKAKRIDLGGFSVIHHL 233 (691)
Q Consensus 214 vl~~a~~ri~iGG~~lt~yL 233 (691)
+. ....+++|.-.+++.+
T Consensus 153 ~~--~~~Sl~lG~vrl~e~f 170 (315)
T 3mdq_A 153 IL--WKQSFEIGGQRLIDRF 170 (315)
T ss_dssp EE--EEEEESCCHHHHHHHS
T ss_pred Ee--eeEEEechhhHHHHHh
Confidence 76 5678899998888753
No 30
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=93.73 E-value=0.61 Score=52.26 Aligned_cols=77 Identities=12% Similarity=0.045 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHhcCCCeEee--chhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecCe
Q psy7893 136 YSRSLMSELLFECYQVPSVCY--GIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGC 213 (691)
Q Consensus 136 ~~re~l~EilFE~f~vp~v~~--~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~ 213 (691)
.++....+-+.+..|++-=.+ ..++-+++.|... +. ....++|||+|+++|.++-+-+|.
T Consensus 100 ~N~~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~----~~--------------~~~~~lvvDIGGGStEl~~~~~~~ 161 (508)
T 3hi0_A 100 ENGPDFIREAEAILGCEIEVLSGEKEALYSAYGVIS----GF--------------YQPDGIAGDLGGGSLELIDIKDKS 161 (508)
T ss_dssp TTHHHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHH----HS--------------SSCEEEEEEECSSCEEEEEEETTE
T ss_pred cCHHHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHh----cC--------------CCCCeEEEEeCCCceEEEEeeCCe
Confidence 445667777777888874333 2445666665411 11 125689999999999999999998
Q ss_pred ecccCeEEeeccHHHHHHH
Q psy7893 214 IDASKAKRIDLGGFSVIHH 232 (691)
Q Consensus 214 vl~~a~~ri~iGG~~lt~y 232 (691)
+. ....+++|.-.+++.
T Consensus 162 ~~--~~~Sl~lG~vrl~e~ 178 (508)
T 3hi0_A 162 CG--EGITLPLGGLRLSEQ 178 (508)
T ss_dssp EC--CCEEESCCHHHHHHH
T ss_pred ee--eEEEecceEEehhhc
Confidence 86 567889999988874
No 31
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=93.55 E-value=0.31 Score=54.70 Aligned_cols=160 Identities=12% Similarity=0.041 Sum_probs=88.6
Q ss_pred CceEEEEcCCceEEEEEeCCCCCcEEEecceeecccCCCCcCCcceeccccccccccccEEecccccCcccCHHHHHHHH
Q psy7893 27 SLPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKERGKKDGETQVGNDISNIEAVRFQLKTQFDKNVVTHYDIQEQIF 106 (691)
Q Consensus 27 ~~~vVID~GS~~~KaG~age~~P~~viPs~vg~~~~~~~~~~~~~~vG~ea~~~~~~~~~l~~Pi~~G~I~nwd~~e~iw 106 (691)
...-|||+||+++|.-.+.-. +.. +..+.+.+.. .-+|+.. ...|. .+.+.++..+
T Consensus 11 ~~~AaIDiGSNSirL~I~~~~-~~~--~~~l~~~k~~-------vrLg~g~-------------~~~g~-Ls~eai~r~~ 66 (513)
T 1u6z_A 11 QEFAAVDLGSNSFHMVIARVV-DGA--MQIIGRLKQR-------VHLADGL-------------GPDNM-LSEEAMTRGL 66 (513)
T ss_dssp -CEEEEEECSSCEEEEEEEEE-TTE--EEEEEEEEEC-------CCTGGGB-------------CTTCC-BCHHHHHHHH
T ss_pred CeEEEEEeccccEEEEEEEEc-CCe--eEEEEeeEEE-------EeccCcc-------------cccCC-cCHHHHHHHH
Confidence 457899999999998766322 111 1122222111 1223221 12233 3456777777
Q ss_pred HHH--Hhh-cC-CCCCCCCCccEEEEecCCCchHHHHHHHHHHHHhcCCCeEeec--hhhHHhhhhccCCCCCCcccccc
Q psy7893 107 DYA--FSH-LS-INTEGNVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYG--IDSLFSYQYNGWEGQSGVIISCG 180 (691)
Q Consensus 107 ~~~--f~~-L~-i~~~~~~~~pvLltEp~~~~~~~re~l~EilFE~f~vp~v~~~--~~alla~ya~~~~~~~G~~~~~~ 180 (691)
+-+ |.. +. .... +..++-|.. +-.-.++....+-+.+..|++-=.+. ..+-+++.|... +.
T Consensus 67 ~~L~~f~~~~~~~~v~---~v~~vATsA-~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~----~~----- 133 (513)
T 1u6z_A 67 NCLSLFAERLQGFSPA---SVCIVGTHT-LRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEH----TQ----- 133 (513)
T ss_dssp HHHHHHHHHTTTCCGG---GEEEEECHH-HHHCTTHHHHHHHHTTTCSSCEEECCHHHHHHHHHHHHHH----HS-----
T ss_pred HHHHHHHHHHHhCCCC---EEEEEecHH-HHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHh----hc-----
Confidence 654 222 21 1111 222333322 11223456677777778887643332 335666655411 11
Q ss_pred ccccccCCCCCceEEEEEeCCceEEEEEeecCeecccCeEEeeccHHHHHHHH
Q psy7893 181 YQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHL 233 (691)
Q Consensus 181 ~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~a~~ri~iGG~~lt~yL 233 (691)
+ ....++|||+|+++|.++-+-+|.+. ....+++|.-.+++.+
T Consensus 134 ------~--~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrlte~f 176 (513)
T 1u6z_A 134 ------P--EKGRKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVSFAQLY 176 (513)
T ss_dssp ------C--CCSCEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHHHHHHH
T ss_pred ------c--CCCCEEEEEECCCcEEEEEEeCCeee--EEEEEeccHHHHHHHH
Confidence 0 01369999999999999988888876 5678999999998765
No 32
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=92.20 E-value=0.035 Score=56.75 Aligned_cols=67 Identities=18% Similarity=0.366 Sum_probs=50.5
Q ss_pred cChHHHHHHHhccCCHHHHHHhhcCEEEeccCCCccchHHHHHHHHhhcCCCCceeEEEeccCCccceeehhhhhcC
Q psy7893 556 AGISETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFSL 632 (691)
Q Consensus 556 ~Gl~e~i~~si~~~~~d~r~~L~~nI~LtGG~s~~~Gf~eRL~~EL~~l~p~~~~i~V~~~~dp~~~aW~Gasilas 632 (691)
+++.+.|.+.+.. ...+......|+|+||.|..|++.++|++.+ ..+++.+.+|.+.+-+||+++|.
T Consensus 187 a~~~~~v~~~l~~--~~~~~~~~~~vvl~GGva~n~~lr~~l~~~~--------g~~~~~p~~p~~~~A~GAAl~A~ 253 (276)
T 4ehu_A 187 AGIHTSVAKRVSS--LVKRIGVQRNVVMVGGVARNSGIVRAMAREI--------NTEIIVPDIPQLTGALGAALYAF 253 (276)
T ss_dssp HHHHHHHHHHHHH--HHHHHCCCSSEEEESGGGGCHHHHHHHHHHH--------TSCEECCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHhcccCCeEEEecCccchHHHHHHHHHHH--------CCCeeeCCCcchHHHHHHHHHHH
Confidence 4566666655532 2234445678999999999999999998775 34678889999988899998874
No 33
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=79.01 E-value=0.88 Score=47.16 Aligned_cols=71 Identities=14% Similarity=0.065 Sum_probs=50.4
Q ss_pred cChHHHHHHHhccCCH-HHHHHhhcCEEEecc-CCCccchHHHHHHHHhhcCCCCceeEEEeccCCccceeehhhhhc
Q psy7893 556 AGISETLNFVLNSYPQ-HIAQSLANNIFVTGS-LCQLPGFVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFS 631 (691)
Q Consensus 556 ~Gl~e~i~~si~~~~~-d~r~~L~~nI~LtGG-~s~~~Gf~eRL~~EL~~l~p~~~~i~V~~~~dp~~~aW~Gasila 631 (691)
+||..+|.+.|..+.. -.+..=.++|+++|| .+..|++.++|.+.+.. ...+++.+++|++..-+||++++
T Consensus 214 asl~~sV~~~I~~la~~~a~~~~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~-----~~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 214 AAVIGVVGEVVTTMAITVAREFKTENIVYIGSSFHNNALLRKVVEDYTVL-----RGCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEESGGGTTCHHHHHHHHHHHHH-----TTCEEEECTTGGGHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCchhcCHHHHHHHHHHHhh-----CCceEEECCCccHHHHHHHHHhC
Confidence 4666666655532211 011222357999999 99999999999976544 25688899999999999998765
No 34
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=78.49 E-value=0.61 Score=48.59 Aligned_cols=47 Identities=15% Similarity=0.227 Sum_probs=33.6
Q ss_pred hcCEEEeccCCCccchHHHHHHHHhhcCCCCceeEEEeccCCccceeehhhhhc
Q psy7893 578 ANNIFVTGSLCQLPGFVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFS 631 (691)
Q Consensus 578 ~~nI~LtGG~s~~~Gf~eRL~~EL~~l~p~~~~i~V~~~~dp~~~aW~Gasila 631 (691)
...|+||||+|.+ +.+.|++. ++.. .-++..+.+|.++.-+|+.+++
T Consensus 273 ~~~vvl~GGga~l--l~~~l~~~----~~~~-~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 273 YTHVMVIGGGAEL--ICDAVKKH----TQIR-DERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCEEEEESTTHHH--HHHHHHHT----SCCC-GGGEECCSCGGGHHHHHHHHHH
T ss_pred CCeEEEECChHHH--HHHHHHHH----hCCC-CCceeeCCCcHHHHHHHHHHhc
Confidence 3679999999987 55555543 3321 1146778899999999998775
No 35
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=78.11 E-value=37 Score=34.39 Aligned_cols=19 Identities=16% Similarity=0.039 Sum_probs=16.1
Q ss_pred eEEEEcCCceEEEEEeCCC
Q psy7893 29 PIVFDNGAWCCRVGWASCE 47 (691)
Q Consensus 29 ~vVID~GS~~~KaG~age~ 47 (691)
-++||+|..++|+|+-.++
T Consensus 4 lL~IDIGNT~iK~gl~d~~ 22 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGD 22 (266)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 5899999999999987543
No 36
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=77.97 E-value=1.5 Score=46.31 Aligned_cols=25 Identities=24% Similarity=0.594 Sum_probs=23.2
Q ss_pred ceEEEEEeCCceEEEEEeecCeecc
Q psy7893 192 QSGVIISCGYQCTHVIPVINGCIDA 216 (691)
Q Consensus 192 ~sgLVVDiG~~~T~IvPV~dG~vl~ 216 (691)
.++|+||||..+|.|+||.+|.|+.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 5699999999999999999999974
No 37
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=77.32 E-value=28 Score=35.38 Aligned_cols=18 Identities=22% Similarity=0.156 Sum_probs=15.3
Q ss_pred EEEEcCCceEEEEEeCCC
Q psy7893 30 IVFDNGAWCCRVGWASCE 47 (691)
Q Consensus 30 vVID~GS~~~KaG~age~ 47 (691)
++||+|..++|.|+-.++
T Consensus 3 L~IDIGNT~ik~gl~~~~ 20 (268)
T 2h3g_X 3 FVLDVGNTNAVLGVFEEG 20 (268)
T ss_dssp EEEEECSSEEEEEEEETT
T ss_pred EEEEECcCcEEEEEEECC
Confidence 789999999999977543
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=68.68 E-value=1.4 Score=44.88 Aligned_cols=48 Identities=17% Similarity=0.261 Sum_probs=39.6
Q ss_pred hcCEEEeccCCCccchHHHHHHHHhhcCCCCceeEEEeccCCccceeehhhhhcCc
Q psy7893 578 ANNIFVTGSLCQLPGFVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFSLS 633 (691)
Q Consensus 578 ~~nI~LtGG~s~~~Gf~eRL~~EL~~l~p~~~~i~V~~~~dp~~~aW~Gasilas~ 633 (691)
...|+++||.+..|++.+.+.+.|. ..|..+.++.+..=+||+++|..
T Consensus 209 ~~~i~~~GG~a~n~~~~~~~~~~lg--------~~v~~p~~~~~~~AlGAAl~A~~ 256 (270)
T 1hux_A 209 VKDVVMTGGVAQNYGVRGALEEGLG--------VEIKTSPLAQYNGALGAALYAYK 256 (270)
T ss_dssp CSSEEEESGGGGCHHHHHHHHHHHC--------SCEECCGGGGGHHHHHHHHHHHH
T ss_pred CCeEEEeCccccCHHHHHHHHHHHC--------CCeEeCCCcchHhHHHHHHHHHH
Confidence 3679999999999999999988863 34677888888888899988853
No 39
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=64.88 E-value=3.5 Score=43.99 Aligned_cols=74 Identities=11% Similarity=-0.057 Sum_probs=53.0
Q ss_pred cChHHHHHHHhccCCH-HHHHHhhcCEEEecc-CCCccchHHHHHHHHhhcCCCCceeEEEeccCCccceeehhhhhc
Q psy7893 556 AGISETLNFVLNSYPQ-HIAQSLANNIFVTGS-LCQLPGFVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFS 631 (691)
Q Consensus 556 ~Gl~e~i~~si~~~~~-d~r~~L~~nI~LtGG-~s~~~Gf~eRL~~EL~~l~p~~~~i~V~~~~dp~~~aW~Gasila 631 (691)
.||..+|.+.|..... -.+..=.++|++||| .+.-|++.+.|.+.|.-..- ..+++..+.+|.+..-+||++.+
T Consensus 283 ~gll~sVa~~I~~lA~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~--g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 283 RATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSK--GQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTT--TSCCEEEETTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhc--CCeeEEEcCCccHHHHHHHHHHh
Confidence 5777777766643321 113333458999999 99999999999998853211 24677888899999999998764
No 40
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=57.28 E-value=1.1 Score=47.76 Aligned_cols=46 Identities=11% Similarity=0.142 Sum_probs=35.5
Q ss_pred HhhcCEEEeccCCCccc--hHHHHHHHHhhcCCCCceeEEEeccCCccceeehhhhhcCc
Q psy7893 576 SLANNIFVTGSLCQLPG--FVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFSLS 633 (691)
Q Consensus 576 ~L~~nI~LtGG~s~~~G--f~eRL~~EL~~l~p~~~~i~V~~~~dp~~~aW~Gasilas~ 633 (691)
..+..|+||||+|.++| +.+.|++++ |. . +||.++.-+|...++..
T Consensus 289 ~~~~~Ivl~GGGa~l~~~~l~~~i~~~~----~~------~--~~p~~anA~G~~~~~~~ 336 (355)
T 3js6_A 289 NSIDRIIVTGGGANIHFDSLSHYYSDVF----EK------A--DDSQFSNVRGYEKLGEL 336 (355)
T ss_dssp TSCSEEEEESTTHHHHHHHHHHHSSSCE----EC------C--SSGGGHHHHHHHHHHHH
T ss_pred hhccEEEEECcchhcchhhHHHHHHHHC----CC------C--CCcHHHHHHHHHHHHHH
Confidence 44578999999999998 777777553 21 1 89999999998877653
No 41
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=56.17 E-value=1.6e+02 Score=29.16 Aligned_cols=23 Identities=30% Similarity=0.550 Sum_probs=18.1
Q ss_pred ceEEEEEeCCceEEEEEeecCeec
Q psy7893 192 QSGVIISCGYQCTHVIPVINGCID 215 (691)
Q Consensus 192 ~sgLVVDiG~~~T~IvPV~dG~vl 215 (691)
..++|||+|...|--+- .+|.-+
T Consensus 122 ~~~iVvD~GTA~T~d~v-~~g~~l 144 (249)
T 3bex_A 122 KNGIIIDMGTATTVDLV-VNGSYE 144 (249)
T ss_dssp SCEEEEEESSEEEEEEE-ETTEEE
T ss_pred CCEEEEEcCCceEEEEE-eCCeEe
Confidence 67899999999887666 776554
No 42
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=53.71 E-value=3.4 Score=43.58 Aligned_cols=48 Identities=15% Similarity=0.134 Sum_probs=32.2
Q ss_pred hhcCEEEeccCCCccchHHHHHHHHhhcCCCCceeEEEeccCCccceeehhhhhcC
Q psy7893 577 LANNIFVTGSLCQLPGFVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFSL 632 (691)
Q Consensus 577 L~~nI~LtGG~s~~~Gf~eRL~~EL~~l~p~~~~i~V~~~~dp~~~aW~Gasilas 632 (691)
....|+||||+|++ +.+.|+++ +|. ..+. ..+.||.++.-+|+..++.
T Consensus 296 ~i~~IvL~GGga~l--l~~~l~~~----~~~-~~i~-~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 296 RVTSLIPVGGGSNL--IGDRFEEI----APG-TLVK-IKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp GEEEEEEESTTHHH--HGGGGGGG----STT-CBCC-CCTTTTTTHHHHHHHHHHH
T ss_pred cccEEEEECCcHHH--HHHHHHHH----CcC-cEEe-ccCCCcHHHHHHHHHHHHh
Confidence 44789999999998 55555544 342 1111 2377999999999876543
No 43
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=53.56 E-value=1.2e+02 Score=30.61 Aligned_cols=68 Identities=18% Similarity=0.130 Sum_probs=45.6
Q ss_pred hHHHHHHHhccCCHHHHHHhhcCEEEeccCCC-ccchHHHHHHHHhhcCCCC--ceeEEEeccCCccceeehhhhhcC
Q psy7893 558 ISETLNFVLNSYPQHIAQSLANNIFVTGSLCQ-LPGFVERLNKDLLENRPFQ--SHFSVSLAENPELDAWSGARQFSL 632 (691)
Q Consensus 558 l~e~i~~si~~~~~d~r~~L~~nI~LtGG~s~-~~Gf~eRL~~EL~~l~p~~--~~i~V~~~~dp~~~aW~Gasilas 632 (691)
|...|.+.+..+++ ..|+|.||.+. .+-|.++|++.+....+.. ..+.|..+.-...++-+||+.++.
T Consensus 250 L~~~i~~l~~~l~p-------~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 320 (326)
T 2qm1_A 250 LGLATGNLGNTLNP-------DSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLAL 320 (326)
T ss_dssp HHHHHHHHHHHHCC-------SEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGG
T ss_pred HHHHHHHHHHhcCC-------CEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHH
Confidence 45556665555443 35999999875 5778899999888875421 145677665555567789887664
No 44
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=48.39 E-value=9.3 Score=39.03 Aligned_cols=66 Identities=18% Similarity=0.257 Sum_probs=49.0
Q ss_pred hHHHHHHHhccCCHHHHHHhhcCEEEeccCCCccchHHHHHHHHhhcCCCCceeEEEeccCCccceeehhhhhcC
Q psy7893 558 ISETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFSL 632 (691)
Q Consensus 558 l~e~i~~si~~~~~d~r~~L~~nI~LtGG~s~~~Gf~eRL~~EL~~l~p~~~~i~V~~~~dp~~~aW~Gasilas 632 (691)
|...|.+.+..+++ +.|+|.||.+..+.|.++|++.+..... ..+.|..+.-...+.-+||+.++.
T Consensus 225 La~~i~~l~~~~~p-------~~IvlgGgi~~~~~~~~~l~~~l~~~~~--~~~~i~~s~lg~~a~~~GAa~l~~ 290 (297)
T 4htl_A 225 ICTGLYNLIYLFDP-------THIFIGGGITSRPTFIAELKHHMESFGL--RDTIIETATHKNQAGLLGAVYHFL 290 (297)
T ss_dssp HHHHHHHHHHHHCC-------SEEEEESGGGGSTTHHHHHHHHHTTTCC--TTCEEEECSCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-------CEEEEeCcccccHHHHHHHHHHHHHhcc--CCCeEEECCcCChHHHHhHHHHHH
Confidence 66667776655553 4599999999999999999999987654 245677776666677889886654
No 45
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=48.18 E-value=81 Score=31.26 Aligned_cols=50 Identities=18% Similarity=0.231 Sum_probs=31.8
Q ss_pred ceEEEEEeCCceEEEEEee-cCeeccc-CeEEeeccHHHHHHHHHHHHhhhC
Q psy7893 192 QSGVIISCGYQCTHVIPVI-NGCIDAS-KAKRIDLGGFSVIHHLHKLLQLKY 241 (691)
Q Consensus 192 ~sgLVVDiG~~~T~IvPV~-dG~vl~~-a~~ri~iGG~~lt~yL~~lL~~~~ 241 (691)
....|+|+|.+.++++-+. +|..... .-...+.||..+.+.+.+.|...+
T Consensus 93 ~~~~vl~lgG~~~~~~~~~~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~ 144 (276)
T 4ehu_A 93 ETRTIIDIGGQDAKVLKLDNNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDV 144 (276)
T ss_dssp TCCEEEEECSSCEEEEEECTTSCEEEEEEECSCSTTSHHHHHHHHHHHTCCG
T ss_pred CCCeEEEEcCCCceEEEEEecCceEEEEeCCCcCcchhhHHHHHHHHhccCh
Confidence 4558999999999998774 4543211 122445677766666777665443
No 46
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=45.37 E-value=7.3 Score=39.37 Aligned_cols=66 Identities=14% Similarity=0.145 Sum_probs=47.6
Q ss_pred hHHHHHHHhccCCHHHHHHhhcCEEEeccCCCccchHHHHHHHHhhcCCCCceeEEEeccCCccceeehhhhhc
Q psy7893 558 ISETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFS 631 (691)
Q Consensus 558 l~e~i~~si~~~~~d~r~~L~~nI~LtGG~s~~~Gf~eRL~~EL~~l~p~~~~i~V~~~~dp~~~aW~Gasila 631 (691)
|...+.+.+..+++ ..|+|.||.+..+-|.++|++.+....+. ..+.|..+.....++.+||+.++
T Consensus 221 L~~~i~~l~~~l~p-------~~ivlgG~~~~~~~~~~~l~~~l~~~~~~-~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 221 LARLIADIKATTDC-------QCVVVGGSVGLAEGYLALVETYLAQEPAA-FHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp HHHHHHHHHHHHCC-------SEEEEEHHHHTSTTHHHHHHHHHTTSCGG-GCCEEEECSCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC-------CEEEEeCcccccHHHHHHHHHHHHHhcCc-cCCEEEECCCCCchHHHHHHHHH
Confidence 66677776665553 35999999887788999999999886332 35677766665666778988765
No 47
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=43.07 E-value=15 Score=38.88 Aligned_cols=37 Identities=11% Similarity=0.161 Sum_probs=27.2
Q ss_pred ceEEEEEeCCceEEEEEeec--CeecccCeEEeeccHHH
Q psy7893 192 QSGVIISCGYQCTHVIPVIN--GCIDASKAKRIDLGGFS 228 (691)
Q Consensus 192 ~sgLVVDiG~~~T~IvPV~d--G~vl~~a~~ri~iGG~~ 228 (691)
.+.+|||+|.++|.|+-... +.+.......+++||..
T Consensus 140 ~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~~~ 178 (353)
T 3aap_A 140 KSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQN 178 (353)
T ss_dssp SCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETTEE
T ss_pred ccEEEEEeCCCceEEEEecCCccccCCCceEEEEECCcc
Confidence 57999999999999987644 33433335778888843
No 48
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=40.74 E-value=17 Score=37.67 Aligned_cols=68 Identities=10% Similarity=0.109 Sum_probs=49.2
Q ss_pred hHHHHHHHhccCCHHHHHHhhcCEEEeccCCCccchHHHHHHHHhhcCCC-CceeEEEeccCCccceeehhhhhcC
Q psy7893 558 ISETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENRPF-QSHFSVSLAENPELDAWSGARQFSL 632 (691)
Q Consensus 558 l~e~i~~si~~~~~d~r~~L~~nI~LtGG~s~~~Gf~eRL~~EL~~l~p~-~~~i~V~~~~dp~~~aW~Gasilas 632 (691)
|...|.+.+..+++ ..|+|.||.+..+-|-++|++.+...... ...++|..+.-...++-+||+.++-
T Consensus 257 La~~i~~l~~~l~p-------~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~l 325 (327)
T 4db3_A 257 LAICFGNIFTANDP-------HVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLNI 325 (327)
T ss_dssp HHHHHHHHHHHHCC-------SEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCC-------CEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHHh
Confidence 66667776655553 35999999998888999999999886543 2356777776666667789887653
No 49
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=37.41 E-value=17 Score=40.85 Aligned_cols=59 Identities=24% Similarity=0.445 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhhCCCCccccc-cccccCCCCC----cEEEecceeeeecccccCCCCCCCcc
Q psy7893 497 EQERLIELEEILRQHDPEFTSLN-QEQELSPKEA----NQLHIGVERMCGPECLFQPSMLGSIQ 555 (691)
Q Consensus 497 ~~~~l~~~~~~l~~~dp~~~~~~-~~~~~~~~~~----~~i~l~~Er~~~pE~LF~Ps~ig~~~ 555 (691)
+.+.++++++.+....+.+.... ....+..|++ +.+.++.|++.+||.||+|+++|...
T Consensus 308 d~~~v~~iKe~~c~v~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~ 371 (593)
T 4fo0_A 308 DCLLLQHLKETFCHLDQDISGLQDHEFQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVG 371 (593)
T ss_dssp HHHHHHHHHHHHCBCCTTCCSCEEEEEEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCS
T ss_pred hHHHHHHHHHHhcccccchHHhhhhhhhcccCCCCceeeEEeccchhhcCchhhcChhhhcccc
Confidence 45667778888777777665522 1222344444 35789999999999999999888653
No 50
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=37.14 E-value=16 Score=38.71 Aligned_cols=68 Identities=16% Similarity=0.233 Sum_probs=47.1
Q ss_pred hHHHHHHHhccCCHHHHHHhhcCEEEeccCCCc-cchHHHHHHHHhhcCCCCceeEEEeccCCccceeehhhhhcC
Q psy7893 558 ISETLNFVLNSYPQHIAQSLANNIFVTGSLCQL-PGFVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFSL 632 (691)
Q Consensus 558 l~e~i~~si~~~~~d~r~~L~~nI~LtGG~s~~-~Gf~eRL~~EL~~l~p~~~~i~V~~~~dp~~~aW~Gasilas 632 (691)
|...+.+.+..+++ ..|+|.||.+.. +-|.++|++.+....+....+.|..+.-...++-+||+.++-
T Consensus 302 La~~i~~l~~~ldP-------~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 302 FSIGLLNLIHLFGI-------SKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp HHHHHHHHHHHHCC-------CEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-------CEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 66677766655553 359999998754 778889988888765433456777665555566789887664
No 51
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=36.96 E-value=8.8 Score=38.83 Aligned_cols=68 Identities=16% Similarity=0.077 Sum_probs=45.5
Q ss_pred hHHHHHHHhccCCHHHHHHhhcCEEEeccCCCccchHHHHHHHHhhcCCCC----ceeEEEeccCCccceeehhhhhcC
Q psy7893 558 ISETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENRPFQ----SHFSVSLAENPELDAWSGARQFSL 632 (691)
Q Consensus 558 l~e~i~~si~~~~~d~r~~L~~nI~LtGG~s~~~Gf~eRL~~EL~~l~p~~----~~i~V~~~~dp~~~aW~Gasilas 632 (691)
|...+.+.+..+++ ..|+|.||.+..+-|.++|++.+....+.. ..+.|..+.-...+.-+||+.++.
T Consensus 215 L~~~i~~l~~~l~p-------~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~ 286 (292)
T 2gup_A 215 LAQGLLNIQYLIDP-------GVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWL 286 (292)
T ss_dssp HHHHHHHHHHHHCC-------SEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-------CEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHH
Confidence 66667666655543 469999998877778888888887654221 235666665555566789887653
No 52
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=36.56 E-value=1.2e+02 Score=31.07 Aligned_cols=65 Identities=12% Similarity=0.173 Sum_probs=40.5
Q ss_pred hHHHHHHHhccCCHHHHHHhhcCEEEeccCCCccchHHHHHHHHhhcCC-CCceeEEEeccCCccceeehhhhhcC
Q psy7893 558 ISETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENRP-FQSHFSVSLAENPELDAWSGARQFSL 632 (691)
Q Consensus 558 l~e~i~~si~~~~~d~r~~L~~nI~LtGG~s~~~Gf~eRL~~EL~~l~p-~~~~i~V~~~~dp~~~aW~Gasilas 632 (691)
|...|.+.+..+++ ..|+|.||.+ +-|.+.|.+.++.... ....+.|..+... .++-+||+.++.
T Consensus 272 La~~i~~l~~~l~P-------~~IvlgG~i~--~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~-~~~~~GAa~l~~ 337 (343)
T 2yhw_A 272 LGLGVVNILHTMNP-------SLVILSGVLA--SHYIHIVKDVIRQQALSSVQDVDVVVSDLV-DPALLGAASMVL 337 (343)
T ss_dssp HHHHHHHHHHHTCC-------SEEEEESTTH--HHHHHHHHHHHHHHSCGGGTTCEEEECCCS-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-------CEEEEeCCcH--HHHHHHHHHHHHHhcccccCCcEEEEccCC-CchHHHHHHHHH
Confidence 55566666655553 3588888875 6778888888876542 2224566655433 245678887653
No 53
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=36.48 E-value=1.8e+02 Score=29.02 Aligned_cols=24 Identities=33% Similarity=0.375 Sum_probs=20.4
Q ss_pred ceEEEEEeCCceEEEEEeecCeec
Q psy7893 192 QSGVIISCGYQCTHVIPVINGCID 215 (691)
Q Consensus 192 ~sgLVVDiG~~~T~IvPV~dG~vl 215 (691)
...+|||+|.+.|.++-+-+|.++
T Consensus 96 ~~~~vidiGGqd~k~i~~~~g~v~ 119 (270)
T 1hux_A 96 NVHTVIDIGGQDVKVIHVENGTMT 119 (270)
T ss_dssp TCCEEEEEETTEEEEEEEETTEEE
T ss_pred CCCEEEEECCCceEEEEEeCCcee
Confidence 444799999999999999898765
No 54
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=35.93 E-value=11 Score=38.78 Aligned_cols=60 Identities=17% Similarity=0.192 Sum_probs=38.3
Q ss_pred HHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecCeeccc
Q psy7893 141 MSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDAS 217 (691)
Q Consensus 141 l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~ 217 (691)
+.+.+=+.|++| |++.+++-+++++-.+- |. .....+.++|-+|.+. -..-|.+|.++..
T Consensus 100 l~~~l~~~~~~p-v~v~ND~~aaa~~e~~~---g~------------~~~~~~~~~l~~GtGi-G~giv~~G~l~~G 159 (326)
T 2qm1_A 100 VKEQIESALGIP-FALDNDANVAALGERWK---GA------------GENNPDVIFITLGTGV-GGGIVAAGKLLHG 159 (326)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHH---ST------------TTTCSCEEEEEESSSE-EEEEEETTEECCC
T ss_pred HHHHHHHHhCCC-EEEecHHHHHHHHHHHh---CC------------CCCCCcEEEEEECCce-EEEEEECCEEeec
Confidence 344444567888 78888888877653110 11 0012789999999984 4566678887753
No 55
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=31.76 E-value=4.1e+02 Score=27.70 Aligned_cols=130 Identities=11% Similarity=-0.024 Sum_probs=0.0
Q ss_pred eEEEEcCCceEEEEEeCCCCCcEEEecceeecccCCCCcCCcceeccccccccccccEEecccccCcccC-HHHHHHHHH
Q psy7893 29 PIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKERGKKDGETQVGNDISNIEAVRFQLKTQFDKNVVTH-YDIQEQIFD 107 (691)
Q Consensus 29 ~vVID~GS~~~KaG~age~~P~~viPs~vg~~~~~~~~~~~~~~vG~ea~~~~~~~~~l~~Pi~~G~I~n-wd~~e~iw~ 107 (691)
.|.||+|+.+++++....+.-.+ ...+.|....-..+ |+.+..+++
T Consensus 87 ~lgiDiG~t~i~~~l~d~~G~il---------------------------------~~~~~~~~~~~~~~~~~~l~~~i~ 133 (406)
T 1z6r_A 87 YLSLRISRGEIFLALRDLSSKLV---------------------------------VEESQELALKDDLPLLDRIISHID 133 (406)
T ss_dssp EEEEEEETTEEEEEEEETTCCEE---------------------------------EEEEEECCSSCSSCHHHHHHHHHH
T ss_pred EEEEEEcCCEEEEEEEcCCCCEE---------------------------------EEEEecCCCCCHHHHHHHHHHHHH
Q ss_pred HHHhhcCCCCCC------------CCCccEEEEecCCCchHHHHHHHHHHHHhcCCCeEeechhhHHhhhh-------cc
Q psy7893 108 YAFSHLSINTEG------------NVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYGIDSLFSYQY-------NG 168 (691)
Q Consensus 108 ~~f~~L~i~~~~------------~~~~pvLltEp~~~~~~~re~l~EilFE~f~vp~v~~~~~alla~ya-------~~ 168 (691)
.++...++++.. ..+..+++ .++..+.-..-.+.+.+=+.|++| |++.+++-+++++ .
T Consensus 134 ~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~-~~~~l~~w~~~~l~~~l~~~~~~p-v~v~NDa~aaalaE~~~g~~~- 210 (406)
T 1z6r_A 134 QFFIRHQKKLERLTSIAITLPGIIDTENGIVH-RMPFYEDVKEMPLGEALEQHTGVP-VYIQHDISAWTMAEALFGASR- 210 (406)
T ss_dssp HHHHHTGGGCCCEEEEEEEESSEEETTTTEEE-ECTTCTTCSSBCHHHHHHHHHSSC-EEEEEHHHHHHHHHHHHSTTT-
T ss_pred HHHHhcCCCcCceeEEEEEeecCEeCCCCEEe-cCCCCCCccCCCHHHHHHHHHCCC-EEEechhHHHHHHHHHhcCCC-
Q ss_pred CCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecCeecc
Q psy7893 169 WEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDA 216 (691)
Q Consensus 169 ~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~ 216 (691)
+. .+.++|-+|.+ .-..-|.+|.++.
T Consensus 211 -----~~----------------~~~v~l~~GtG-iG~giv~~G~l~~ 236 (406)
T 1z6r_A 211 -----GA----------------RDVIQVVIDHN-VGAGVITDGHLLH 236 (406)
T ss_dssp -----TC----------------SSEEEEEESSS-EEEEEEETTEETT
T ss_pred -----CC----------------CcEEEEEECCc-EEEEEEECCEEee
No 56
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=30.62 E-value=4e+02 Score=26.95 Aligned_cols=60 Identities=12% Similarity=-0.064 Sum_probs=39.2
Q ss_pred HHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecCeeccc
Q psy7893 141 MSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDAS 217 (691)
Q Consensus 141 l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~ 217 (691)
+.+.|-+.|++| |++.+++-+++++-.+- |. .....+.++|-+|.+. -..-|.+|.++..
T Consensus 112 l~~~l~~~~~~p-V~v~NDa~aaalgE~~~---g~------------~~~~~~~~~l~~GtGi-G~gii~~G~l~~G 171 (327)
T 4db3_A 112 LRADLEAKIGRS-VKIENDANCFALSEAWD---EE------------LQDAPSVMGLILGTGF-GGGLIYEGKVFSG 171 (327)
T ss_dssp HHHHHHHHHSSC-CEEEEHHHHHHHHHHTS---TT------------TTTCSEEEEEEESSSE-EEEEEETTEECCC
T ss_pred HHHHHHHHHCCC-EEEecchhHHHHHHHHh---CC------------CCCCCcEEEEEeCccc-eEEEEECCEEeec
Confidence 445566678998 88999988877764221 11 0123788889999884 3445678887643
No 57
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=30.32 E-value=17 Score=37.38 Aligned_cols=67 Identities=25% Similarity=0.304 Sum_probs=48.3
Q ss_pred hHHHHHHHhccCCHHHHHHhhcCEEEeccCCCc-cchHHHHHHHHhhcCCCC--ceeEEEeccCCccceeehhhhhc
Q psy7893 558 ISETLNFVLNSYPQHIAQSLANNIFVTGSLCQL-PGFVERLNKDLLENRPFQ--SHFSVSLAENPELDAWSGARQFS 631 (691)
Q Consensus 558 l~e~i~~si~~~~~d~r~~L~~nI~LtGG~s~~-~Gf~eRL~~EL~~l~p~~--~~i~V~~~~dp~~~aW~Gasila 631 (691)
|...|.+.+..+++ ..|+|.||.+.. +-|.++|++.|....... ..+.|..+.-...++-+||+.++
T Consensus 248 La~~i~~l~~~ldP-------~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 248 IGESLVNIVRVMDL-------NNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp HHHHHHHHHHHHCC-------CEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCC-------CEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 66667776655553 459999998876 678899999998876431 24677777766677788988765
No 58
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=30.01 E-value=39 Score=34.80 Aligned_cols=75 Identities=16% Similarity=0.117 Sum_probs=46.3
Q ss_pred ChHHHHHHHhccCCHHHHHH-hhcCEEEeccCCC-ccchHHHHHHHHhhcC--CC-CceeEEEeccCCccceeehhhhhc
Q psy7893 557 GISETLNFVLNSYPQHIAQS-LANNIFVTGSLCQ-LPGFVERLNKDLLENR--PF-QSHFSVSLAENPELDAWSGARQFS 631 (691)
Q Consensus 557 Gl~e~i~~si~~~~~d~r~~-L~~nI~LtGG~s~-~~Gf~eRL~~EL~~l~--p~-~~~i~V~~~~dp~~~aW~Gasila 631 (691)
-|...|.+.+..++++.... --..|+|.||.+. .+-|.++|++.+.... +. ...+.|..+.... ++-+||+.++
T Consensus 244 ~La~~i~~l~~~~~p~~~~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~-a~~~GAa~la 322 (347)
T 2ch5_A 244 MLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRH-SSALGGASLG 322 (347)
T ss_dssp HHHHHHHHHGGGSCGGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEESS-CTHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccccCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEecCC-ChHHHHHHHH
Confidence 37788888888887652110 0015888888874 3777888888888764 22 1223444443334 6778988776
Q ss_pred C
Q psy7893 632 L 632 (691)
Q Consensus 632 s 632 (691)
.
T Consensus 323 ~ 323 (347)
T 2ch5_A 323 A 323 (347)
T ss_dssp H
T ss_pred H
Confidence 3
No 59
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=29.86 E-value=22 Score=36.57 Aligned_cols=68 Identities=13% Similarity=0.127 Sum_probs=47.5
Q ss_pred hHHHHHHHhccCCHHHHHHhhcCEEEeccCCCc-cchHHHHHHHHhhcCC---CCceeEEEeccCCccceeehhhhhcC
Q psy7893 558 ISETLNFVLNSYPQHIAQSLANNIFVTGSLCQL-PGFVERLNKDLLENRP---FQSHFSVSLAENPELDAWSGARQFSL 632 (691)
Q Consensus 558 l~e~i~~si~~~~~d~r~~L~~nI~LtGG~s~~-~Gf~eRL~~EL~~l~p---~~~~i~V~~~~dp~~~aW~Gasilas 632 (691)
|...|.+.+..+++ ..|+|.||.+.. +=|.++|++.+....+ ....+.|..+.-...+.-+||+.++.
T Consensus 240 La~~i~~l~~~l~p-------~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~~ 311 (321)
T 3vgl_A 240 AGAGLADLASLFDP-------SAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLAR 311 (321)
T ss_dssp HHHHHHHHHHHHCC-------SEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-------CEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHHH
Confidence 66667776655553 359999998876 3458888888887664 22356787777666777788886654
No 60
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=29.74 E-value=21 Score=36.40 Aligned_cols=68 Identities=12% Similarity=0.076 Sum_probs=46.7
Q ss_pred hHHHHHHHhccCCHHHHHHhhcCEEEeccCC-Cc-cchHHHHHHHHhhcCCCCceeEEEeccCCccceeehhhhhcC
Q psy7893 558 ISETLNFVLNSYPQHIAQSLANNIFVTGSLC-QL-PGFVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFSL 632 (691)
Q Consensus 558 l~e~i~~si~~~~~d~r~~L~~nI~LtGG~s-~~-~Gf~eRL~~EL~~l~p~~~~i~V~~~~dp~~~aW~Gasilas 632 (691)
|...+.+.+..+++ ..|+|.||.+ .. +-|.++|++.+....+......|..+.-...++-+||+.++-
T Consensus 225 l~~~i~~l~~~~~p-------~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 225 VGIGLASLVKAFDP-------GVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp HHHHHHHHHHHHCC-------SEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCC-------CEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 66666666655543 4589999987 65 558999999998876543333466665555667789887664
No 61
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=25.72 E-value=46 Score=36.45 Aligned_cols=51 Identities=12% Similarity=0.068 Sum_probs=41.7
Q ss_pred CEEEeccCCCccchHHHHHHHHhhcCCC------CceeEEEeccCCccceeehhhhhcCc
Q psy7893 580 NIFVTGSLCQLPGFVERLNKDLLENRPF------QSHFSVSLAENPELDAWSGARQFSLS 633 (691)
Q Consensus 580 nI~LtGG~s~~~Gf~eRL~~EL~~l~p~------~~~i~V~~~~dp~~~aW~Gasilas~ 633 (691)
.|.+.||....|+|.+++++-|+.+++. ..+|.+..+.|. +=+||+++|..
T Consensus 386 ~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~dg---sg~GAAl~aa~ 442 (457)
T 2yhx_A 386 HIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAIDG---XGAASXVIXSI 442 (457)
T ss_dssp EEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCCT---TTHHHHHHHHH
T ss_pred EEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECCCc---hhhhHHHHHHH
Confidence 5888888888899999999999998754 457888888774 66788888765
No 62
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=25.60 E-value=5.3e+02 Score=25.95 Aligned_cols=82 Identities=11% Similarity=0.042 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHhhcCCCCC-CCCCccEEEEecCCCchHHHHHHHHHHHHhcC---CCeEeechhhHHhhhhccCCCCCC
Q psy7893 99 YDIQEQIFDYAFSHLSINTE-GNVNHPIVLTEPFLNPNYSRSLMSELLFECYQ---VPSVCYGIDSLFSYQYNGWEGQSG 174 (691)
Q Consensus 99 wd~~e~iw~~~f~~L~i~~~-~~~~~pvLltEp~~~~~~~re~l~EilFE~f~---vp~v~~~~~alla~ya~~~~~~~G 174 (691)
|+.+..+++.++...++++. . -..+-+.-|-.........+.+.+=+.|+ +| |.+.+++-+++++. + |
T Consensus 49 ~~~i~~~i~~~~~~~~~~~~~~--i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~p-v~v~NDa~aaa~a~-~----~ 120 (347)
T 2ch5_A 49 VERINEMVNRAKRKAGVDPLVP--LRSLGLSLSGGDQEDAGRILIEELRDRFPYLSES-YLITTDAAGSIATA-T----P 120 (347)
T ss_dssp HHHHHHHHHHHHHHHTCCTTCC--BSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSC-EEEEEHHHHHHHHH-C----S
T ss_pred HHHHHHHHHHHHHhcCCCcccc--eeEEEEeccCCCchHHHHHHHHHHHHhcCCCCce-EEEECcHHHHHHhh-C----C
Confidence 45555566655554444321 1 12455666655444444456666666776 55 78889988888774 2 3
Q ss_pred ccccccccccccCCCCCceEEEEEeCCceEE
Q psy7893 175 VIISCGYQVYQYNGWEGQSGVIISCGYQCTH 205 (691)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~ 205 (691)
.++++|-+|.+.--
T Consensus 121 -----------------~~~v~v~~GTGig~ 134 (347)
T 2ch5_A 121 -----------------DGGVVLISGTGSNC 134 (347)
T ss_dssp -----------------SCEEEEEESSSEEE
T ss_pred -----------------CCcEEEEEcCCcee
Confidence 56788888887644
No 63
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=25.56 E-value=5e+02 Score=25.66 Aligned_cols=70 Identities=10% Similarity=-0.056 Sum_probs=46.3
Q ss_pred cEEEEecCCCchHHHHHHHHHHHHhcCC-CeEeechhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCc
Q psy7893 124 PIVLTEPFLNPNYSRSLMSELLFECYQV-PSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQ 202 (691)
Q Consensus 124 pvLltEp~~~~~~~re~l~EilFE~f~v-p~v~~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~ 202 (691)
.+-+.-|-.. ......+.+.|=+.|++ ..+.+.+++-+++++.. |. .++++|=+|.+
T Consensus 62 ~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~-----g~----------------~~~v~v~~GTG 119 (291)
T 1zbs_A 62 AVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC-----GD----------------SEGIACILGTG 119 (291)
T ss_dssp EEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT-----TT----------------SCEEEEEESSS
T ss_pred EEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc-----CC----------------CCcEEEEecCC
Confidence 3555555544 22233566666667876 35899999999988841 44 77888889998
Q ss_pred eEEEEEeecCeec
Q psy7893 203 CTHVIPVINGCID 215 (691)
Q Consensus 203 ~T~IvPV~dG~vl 215 (691)
.--..-+.+|.+.
T Consensus 120 igg~~i~~~G~~~ 132 (291)
T 1zbs_A 120 SNSCLFDGREIKA 132 (291)
T ss_dssp EEEEEECSSSEEE
T ss_pred hheEEECCCCcEE
Confidence 7544445688764
No 64
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=25.01 E-value=35 Score=34.88 Aligned_cols=68 Identities=9% Similarity=-0.006 Sum_probs=47.5
Q ss_pred hHHHHHHHhccCCHHHHHHhhcCEEEeccCCCccchHHHHHHHHhhcCCC---------CceeEEEeccCCccceeehhh
Q psy7893 558 ISETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENRPF---------QSHFSVSLAENPELDAWSGAR 628 (691)
Q Consensus 558 l~e~i~~si~~~~~d~r~~L~~nI~LtGG~s~~~Gf~eRL~~EL~~l~p~---------~~~i~V~~~~dp~~~aW~Gas 628 (691)
|...|.+.+.-++ .+.|+|.||.+..+-|-++|++.+...... ..++.|..+.-...+.-+||+
T Consensus 212 La~~i~nl~~~ld-------Pe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa 284 (302)
T 3epq_A 212 IAQALAQYILILA-------PXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTL 284 (302)
T ss_dssp HHHHHHHHHHHTC-------CSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHH
T ss_pred HHHHHHHHHHHHC-------chhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHH
Confidence 6667777776665 356999999888777888888888876421 112456666655667778988
Q ss_pred hhcC
Q psy7893 629 QFSL 632 (691)
Q Consensus 629 ilas 632 (691)
.++.
T Consensus 285 ~l~~ 288 (302)
T 3epq_A 285 VLAH 288 (302)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 65
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=24.62 E-value=5.3e+02 Score=25.61 Aligned_cols=131 Identities=13% Similarity=0.110 Sum_probs=68.2
Q ss_pred ceEEEEcCCceEEEEEeCCCCCcEEEecceeecccCCCCcCCcceeccccccccccccEEecccccCcccCHHHHHHHHH
Q psy7893 28 LPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKERGKKDGETQVGNDISNIEAVRFQLKTQFDKNVVTHYDIQEQIFD 107 (691)
Q Consensus 28 ~~vVID~GS~~~KaG~age~~P~~viPs~vg~~~~~~~~~~~~~~vG~ea~~~~~~~~~l~~Pi~~G~I~nwd~~e~iw~ 107 (691)
..|.||+|+.++|++....+.- ++ ++.+. +. .+...+.-.-|+.+..+++
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~-il-----~~~~~-----------~~-------------~~~~~~~~~~~~~l~~~i~ 61 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGT-PL-----AMAEG-----------GA-------------SALSQGIAKSWQAVLSTLE 61 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCC-EE-----EEEEE-----------SC-------------CCGGGCHHHHHHHHHHHHH
T ss_pred EEEEEEcCccceEEEEEcCCCC-EE-----EEEeC-----------CC-------------CCcccCHHHHHHHHHHHHH
Confidence 4789999999999998754432 11 11100 00 0001111112455555666
Q ss_pred HHHhhcCCCCCCCCCccEEEEecCCCchHHHHHHHHHHHHhc--CCCeEeechhhHHhhhhccCCCCCCccccccccccc
Q psy7893 108 YAFSHLSINTEGNVNHPIVLTEPFLNPNYSRSLMSELLFECY--QVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQ 185 (691)
Q Consensus 108 ~~f~~L~i~~~~~~~~pvLltEp~~~~~~~re~l~EilFE~f--~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~~~~~ 185 (691)
.++...++++....-..+-+.-|-......... +-+.| ++ .|++.+++-+++++.. +.
T Consensus 62 ~~l~~~~~~~~~i~~~~igig~pG~v~~~~~~~----l~~~~~~~~-pv~v~NDa~aaa~ge~-----~~---------- 121 (305)
T 1zc6_A 62 AAFQQAGLPAAPASACAIGLGLSGVHNRQWAGE----FESQAPGFA-RLSLATDGYTTLLGAH-----GG---------- 121 (305)
T ss_dssp HHHHHTTCCCCCGGGEEEEEEESCCCTTSHHHH----HHHTCCCCS-EEEEECHHHHHHHHHT-----TT----------
T ss_pred HHHHhcCCChhhhccceEEEEecCCCchHHHHH----HHHhCCCCc-eEEEECCHHHHHHhhc-----CC----------
Confidence 655544544331000135555554433222221 33345 34 4888999999888751 33
Q ss_pred cCCCCCceEEEEEeCCceEEEEEeecCee
Q psy7893 186 YNGWEGQSGVIISCGYQCTHVIPVINGCI 214 (691)
Q Consensus 186 ~~~~~~~sgLVVDiG~~~T~IvPV~dG~v 214 (691)
.++++|-+|.+..-..-+.+|..
T Consensus 122 ------~~~v~v~~GTGigg~~i~~~G~~ 144 (305)
T 1zc6_A 122 ------QPGIIVALGTGSIGEALYPDGSH 144 (305)
T ss_dssp ------SSEEEEEESSSEEEEEECTTSCE
T ss_pred ------CCeEEEEecCCeEEEEEeCCCcE
Confidence 67888999998743332337764
No 66
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=23.52 E-value=49 Score=35.07 Aligned_cols=89 Identities=17% Similarity=0.067 Sum_probs=54.1
Q ss_pred hHHHHHHHhccC--CHHHHHHhhcCEEEeccCCCccc-hHHHHHHHHhhcCCCCceeEEEeccCCccceeehhhhhcCcc
Q psy7893 558 ISETLNFVLNSY--PQHIAQSLANNIFVTGSLCQLPG-FVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFSLSE 634 (691)
Q Consensus 558 l~e~i~~si~~~--~~d~r~~L~~nI~LtGG~s~~~G-f~eRL~~EL~~l~p~~~~i~V~~~~dp~~~aW~Gasilas~~ 634 (691)
|...|.+.+..+ + ...|+|+||.+...- |.++|.+.+..+. ++.|..+.....+.-+||+.++...
T Consensus 281 la~~i~~l~~~l~~~-------p~~IvlgGgi~~~~~~l~~~i~~~l~~~~----~~~i~~~~~~~~a~~~GAa~l~~~~ 349 (381)
T 1saz_A 281 IAKWIGKMAAVLKGE-------VDFIVLTGGLAHEKEFLVPWITKRVSFIA----PVLVFPGSNEEKALALSALRVLRGE 349 (381)
T ss_dssp HHHHHHHHHHHTTTC-------CSEEEEEEGGGGCTTTHHHHHHHHHTTTS----CEEEEEBCCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhcCC-------CCEEEEeCcCccChHHHHHHHHHHHHhhc----CeEEEecCcchhHHHHHHHHHHcCC
Confidence 566666666555 4 246999999987655 8899999988764 4566655544446678888776542
Q ss_pred ccccc-----cccHHHHhhhchhhHhhc
Q psy7893 635 NFHDF-----AVTQSDYQEKGGEFFRVH 657 (691)
Q Consensus 635 ~f~~~-----~itk~eYeE~G~~~~~~k 657 (691)
.-... --.++-|+-++-.+++.|
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (381)
T 1saz_A 350 EKPKNYSEESRRWRERYDSYLDGILRHH 377 (381)
T ss_dssp SCCEEHHHHHHHHHHHHHHHTGGGCC--
T ss_pred cccccchhHhHHHHHHHHhhhhhhhhcc
Confidence 10000 112455666666555443
No 67
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=22.82 E-value=21 Score=36.74 Aligned_cols=67 Identities=13% Similarity=0.190 Sum_probs=42.5
Q ss_pred hHHHHHHHhccCCHHHHHHhhcCEEEeccCCCccchHHHHHHHHhhcCC-CCceeEEEeccCCccceeehhhhhc
Q psy7893 558 ISETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENRP-FQSHFSVSLAENPELDAWSGARQFS 631 (691)
Q Consensus 558 l~e~i~~si~~~~~d~r~~L~~nI~LtGG~s~~~Gf~eRL~~EL~~l~p-~~~~i~V~~~~dp~~~aW~Gasila 631 (691)
|...|.+.+..+++ ..|+|.||.+..+.|-.+|++.+....+ ....+.|..+.-...++-+||+.++
T Consensus 257 La~~i~~l~~~l~p-------~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~la 324 (327)
T 2ap1_A 257 LAVCLGNILTIVDP-------DLLVIGGGLSNFTAITTQLAERLPRHLLPVARAPRIERARHGDAGGMRGAAFLH 324 (327)
T ss_dssp HHHHHHHHHHHHCC-------SEEEEESGGGGSTHHHHSSGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCC-------CEEEEeChhhcchhHHHHHHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHHHH
Confidence 66667766655553 3589999887655444446666655443 2235677776655566778988765
No 68
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=22.43 E-value=5e+02 Score=26.85 Aligned_cols=58 Identities=21% Similarity=0.161 Sum_probs=37.7
Q ss_pred HHHHHHHhcCCCeEeechhhHHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecCeeccc
Q psy7893 141 MSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDAS 217 (691)
Q Consensus 141 l~EilFE~f~vp~v~~~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~ 217 (691)
+.+.+=+.|++| |++.+++-+++++-.+- |. .. .+.++|-+|.+.- ..-|.+|.++..
T Consensus 180 l~~~l~~~~~~p-V~v~NDanaaalaE~~~---g~-------------~~-~~~v~l~~GtGiG-~giv~~G~l~~G 237 (380)
T 2hoe_A 180 LANLLKEKYGIE-VWVENDADMGAVGEKWY---TK-------------RD-DSFAWILTGKGIG-AGIIIDGELYRG 237 (380)
T ss_dssp HHHHHHHHHCSE-EEEEEHHHHHHHHHHHH---TT-------------CC-SCEEEEEESSSCE-EEEEETTEECCC
T ss_pred hHHHHHHHhCCC-EEEechHHHHHHHHHHh---CC-------------CC-CcEEEEEeCCceE-EEEEECCEEecc
Confidence 344555567887 78889988877663110 21 11 6889999998854 555678887643
No 69
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=21.22 E-value=45 Score=36.43 Aligned_cols=50 Identities=30% Similarity=0.398 Sum_probs=36.5
Q ss_pred EEEeccCC-CccchHHHHHHHHhhcCCCCceeEEEeccCCccceeehhhhhcCc
Q psy7893 581 IFVTGSLC-QLPGFVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFSLS 633 (691)
Q Consensus 581 I~LtGG~s-~~~Gf~eRL~~EL~~l~p~~~~i~V~~~~dp~~~aW~Gasilas~ 633 (691)
|.+.||.. ..|+|.+++++.|+.++.+..+|.+..+. ..+.+||+++|..
T Consensus 396 V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l~~---dgs~iGAAllA~~ 446 (451)
T 1bdg_A 396 VGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRLSE---DGSGKGAAAIAAS 446 (451)
T ss_dssp EEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEECT---THHHHHHHHHHTT
T ss_pred EEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEECC---CccHHHHHHHHHH
Confidence 44555553 67899999999999886555667776544 4688899988764
Done!