BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7895
(108 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|114052188|ref|NP_001040463.1| transcription initiation factor IIA gamma chain [Bombyx mori]
gi|95102994|gb|ABF51438.1| transcription initiation factor IIA gamma chain [Bombyx mori]
Length = 108
Score = 191 bits (485), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/108 (82%), Positives = 100/108 (92%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTT+GNTLQESLDELIQYG ITP LA+KVLLQFDKSIN AL ++VKSRLTFK+
Sbjct: 1 MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSDDRK 108
GKLNTYRFCDNVWTF+L DVEFREV E+A+V K+KIVACDGK+ DDR+
Sbjct: 61 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKNVDDRR 108
>gi|357617974|gb|EHJ71090.1| transcription initiation factor IIA gamma chain [Danaus plexippus]
Length = 106
Score = 188 bits (477), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/103 (85%), Positives = 98/103 (95%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTT+GNTLQESLDELIQYG ITPTLA+KVLLQFDKSIN AL ++VKSRLTFK+
Sbjct: 1 MSYQLYRNTTIGNTLQESLDELIQYGQITPTLAVKVLLQFDKSINTALSNRVKSRLTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
GKLNTYRFCDNVWTF+L DVEFREV E+A+V+K+KIVACDGKS
Sbjct: 61 GKLNTYRFCDNVWTFMLNDVEFREVQEVAKVDKVKIVACDGKS 103
>gi|383847845|ref|XP_003699563.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Megachile rotundata]
Length = 112
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/105 (82%), Positives = 97/105 (92%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITP LA+KVLLQFDK+IN AL ++VKSRLTFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPQLALKVLLQFDKAINQALATRVKSRLTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
GKLNTYRFCDNVWTF+L DVEFREV E+A V+K+KIVACDGK+ D
Sbjct: 61 GKLNTYRFCDNVWTFMLNDVEFREVQEVAMVDKVKIVACDGKTLD 105
>gi|66504876|ref|XP_623063.1| PREDICTED: transcription initiation factor IIA subunit 2 [Apis
mellifera]
Length = 112
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/105 (82%), Positives = 97/105 (92%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITP LA+KVLLQFDK+IN AL ++VKSRLTFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPQLAIKVLLQFDKAINQALATRVKSRLTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
GKLNTYRFCDNVWTF+L DVEFREV E+A V+K+KIVACDGK+ D
Sbjct: 61 GKLNTYRFCDNVWTFMLNDVEFREVQEVAIVDKVKIVACDGKTLD 105
>gi|332022639|gb|EGI62927.1| Transcription initiation factor IIA subunit 2 [Acromyrmex
echinatior]
Length = 112
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/105 (82%), Positives = 97/105 (92%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITP LA+KVLLQFDK+IN AL ++VKSRLTFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPQLAIKVLLQFDKAINQALATRVKSRLTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
GKLNTYRFCDNVWTF+L DVEFREV E+A V+K+KIVACDGK+ D
Sbjct: 61 GKLNTYRFCDNVWTFMLNDVEFREVQEVAIVDKVKIVACDGKTLD 105
>gi|380014682|ref|XP_003691351.1| PREDICTED: transcription initiation factor IIA subunit 2-like [Apis
florea]
Length = 112
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/105 (82%), Positives = 97/105 (92%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITP LA+KVLLQFDK+IN AL ++VKSRLTFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPQLAIKVLLQFDKAINQALATRVKSRLTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
GKLNTYRFCDNVWTF+L DVEFREV E+A V+K+KIVACDGK+ D
Sbjct: 61 GKLNTYRFCDNVWTFMLNDVEFREVQEVAIVDKVKIVACDGKTLD 105
>gi|307190250|gb|EFN74357.1| Transcription initiation factor IIA subunit 2 [Camponotus
floridanus]
Length = 112
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/105 (82%), Positives = 97/105 (92%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITP LA+KVLLQFDK+IN AL ++VKSRLTFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPQLAIKVLLQFDKAINQALATRVKSRLTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
GKLNTYRFCDNVWTF+L DVEFREV E+A V+K+KIVACDGK+ D
Sbjct: 61 GKLNTYRFCDNVWTFMLNDVEFREVQEVAIVDKVKIVACDGKTLD 105
>gi|307208051|gb|EFN85582.1| Transcription initiation factor IIA subunit 2 [Harpegnathos
saltator]
Length = 170
Score = 184 bits (468), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/103 (84%), Positives = 95/103 (92%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITP LA+KVLLQFDK IN AL ++VKSRLTFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPQLAIKVLLQFDKVINQALATRVKSRLTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
GKLNTYRFCDNVWTF+L DVEFREV E+A V+K+KIVACDGKS
Sbjct: 61 GKLNTYRFCDNVWTFMLNDVEFREVQEVAMVDKVKIVACDGKS 103
>gi|340709907|ref|XP_003393541.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Bombus terrestris]
gi|350398694|ref|XP_003485276.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Bombus impatiens]
Length = 112
Score = 184 bits (467), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 87/105 (82%), Positives = 96/105 (91%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITP LA+KVLLQFDK+IN AL ++VKSRL FK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPQLAIKVLLQFDKAINQALAARVKSRLIFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
GKLNTYRFCDNVWTF+L DVEFREV EIA V+K+KIVACDGK+ D
Sbjct: 61 GKLNTYRFCDNVWTFMLNDVEFREVQEIAIVDKVKIVACDGKTLD 105
>gi|195054706|ref|XP_001994264.1| GH10565 [Drosophila grimshawi]
gi|193896134|gb|EDV95000.1| GH10565 [Drosophila grimshawi]
Length = 107
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/105 (81%), Positives = 94/105 (89%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITPTLA KVLLQFDKSIN AL +VK+R+TFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPTLAFKVLLQFDKSINNALNQRVKARVTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
GKLNTYRFCDNVWT +L DVEFREV E +V+K+KIVACDGKS D
Sbjct: 61 GKLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGKSGD 105
>gi|121543873|gb|ABM55601.1| transcription initiation factor IIA gamma chain-like protein
[Maconellicoccus hirsutus]
Length = 115
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/108 (77%), Positives = 99/108 (91%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGNTLQESLDELIQYG ITP LA+KVLLQFDK+IN AL +KVK+R++FK+
Sbjct: 1 MTYQLYRNTTLGNTLQESLDELIQYGQITPQLAIKVLLQFDKTINNALATKVKTRISFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSDDRK 108
GKL+TYRFCDNVWTF+L DVEFREVAE+A+V K+KIVACDGK+ + K
Sbjct: 61 GKLSTYRFCDNVWTFMLNDVEFREVAELAKVEKVKIVACDGKNMNASK 108
>gi|156545984|ref|XP_001607333.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Nasonia vitripennis]
Length = 112
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/105 (80%), Positives = 97/105 (92%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITP LA+KVLLQFDK+IN AL ++VKSRL+F++
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAVKVLLQFDKAINQALATRVKSRLSFRA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
GKLNTYRFCDNVWTF+L DVEFREV E+A V+K+KIVACDGK+ D
Sbjct: 61 GKLNTYRFCDNVWTFMLNDVEFREVHEVAMVDKVKIVACDGKTLD 105
>gi|195392308|ref|XP_002054801.1| GJ24638 [Drosophila virilis]
gi|194152887|gb|EDW68321.1| GJ24638 [Drosophila virilis]
Length = 107
Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/105 (80%), Positives = 93/105 (88%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITP LA KVLLQFDKSIN AL +VK+R+TFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPALAFKVLLQFDKSINNALNQRVKARVTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
GKLNTYRFCDNVWT +L DVEFREV E +V+K+KIVACDGKS D
Sbjct: 61 GKLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGKSGD 105
>gi|332373300|gb|AEE61791.1| unknown [Dendroctonus ponderosae]
Length = 106
Score = 181 bits (459), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/105 (80%), Positives = 95/105 (90%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLG+TLQESLDEL+QYG ITP LA KVLLQFDKSIN L ++VKSRLTFK+
Sbjct: 1 MSYQLYRNTTLGHTLQESLDELLQYGQITPQLACKVLLQFDKSINQMLATRVKSRLTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
GKLNTYRFCDNVWTF+L DVEFREV EI +++K+KIVACDGKS D
Sbjct: 61 GKLNTYRFCDNVWTFMLNDVEFREVHEITKIDKVKIVACDGKSID 105
>gi|17738155|ref|NP_524467.1| Transcription-factor-IIA-S [Drosophila melanogaster]
gi|1711664|sp|P52656.1|T2AG_DROME RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=TFIIA p14 subunit; Short=TFIIA-14;
AltName: Full=Transcription initiation factor IIA gamma
chain; Short=TFIIA-gamma; AltName: Full=dTFIIA-S
gi|662912|emb|CAA58244.1| dTFIIA-S [Drosophila melanogaster]
gi|7301064|gb|AAF56199.1| Transcription-factor-IIA-S [Drosophila melanogaster]
gi|201065449|gb|ACH92134.1| FI01012p [Drosophila melanogaster]
Length = 106
Score = 181 bits (458), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/105 (80%), Positives = 94/105 (89%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITP LA KVLLQFDKSIN AL +VK+R+TFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
GKLNTYRFCDNVWT +L DVEFREV EI +V+K+KIVACDGKS +
Sbjct: 61 GKLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGKSGE 105
>gi|242020422|ref|XP_002430654.1| transcription initiation factor IIA gamma chain, putative
[Pediculus humanus corporis]
gi|212515826|gb|EEB17916.1| transcription initiation factor IIA gamma chain, putative
[Pediculus humanus corporis]
Length = 112
Score = 180 bits (457), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 83/103 (80%), Positives = 95/103 (92%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLG TLQESLD+LIQYG ITP L MKVLLQFDKSIN AL ++VKS+LTF++
Sbjct: 1 MSYQLYRNTTLGTTLQESLDDLIQYGHITPQLGMKVLLQFDKSINNALSTRVKSKLTFRA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
GKLNTYRFCDNVWTF LTDVEFREV EIA+V+K+K+VACDG++
Sbjct: 61 GKLNTYRFCDNVWTFFLTDVEFREVQEIAKVDKVKVVACDGRN 103
>gi|195109783|ref|XP_001999461.1| GI23054 [Drosophila mojavensis]
gi|193916055|gb|EDW14922.1| GI23054 [Drosophila mojavensis]
Length = 107
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/105 (80%), Positives = 93/105 (88%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITP LA KVLLQFDKSIN AL +VK+R+TFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPALAFKVLLQFDKSINIALNQRVKARVTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
GKLNTYRFCDNVWT +L DVEFREV E +V+K+KIVACDGKS D
Sbjct: 61 GKLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGKSGD 105
>gi|195445356|ref|XP_002070290.1| GK11978 [Drosophila willistoni]
gi|194166375|gb|EDW81276.1| GK11978 [Drosophila willistoni]
Length = 106
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/105 (80%), Positives = 93/105 (88%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITP LA KVLLQFDKSIN AL +VK+R+TFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPALAFKVLLQFDKSINNALNQRVKARVTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
GKLNTYRFCDNVWT +L DVEFREV E +V+K+KIVACDGKS +
Sbjct: 61 GKLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGKSGE 105
>gi|194745812|ref|XP_001955381.1| GF18732 [Drosophila ananassae]
gi|190628418|gb|EDV43942.1| GF18732 [Drosophila ananassae]
Length = 106
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/105 (80%), Positives = 93/105 (88%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITP LA KVLLQFDKSIN AL +VK+R+TFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPNLAFKVLLQFDKSINNALNQRVKARVTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
GKLNTYRFCDNVWT +L DVEFREV E +V+K+KIVACDGKS +
Sbjct: 61 GKLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGKSGE 105
>gi|240849492|ref|NP_001155689.1| transcription initiation factor IIA gamma chain-like [Acyrthosiphon
pisum]
gi|239788400|dbj|BAH70884.1| ACYPI007048 [Acyrthosiphon pisum]
Length = 112
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/107 (73%), Positives = 96/107 (89%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQES+DE+IQYG ITP L MK+LLQFDKS+N +L ++VKS++TFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESIDEMIQYGQITPALGMKILLQFDKSVNNSLATRVKSKITFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSDDR 107
GK++TYRFCDNVWTF+L+DVEF+E E+A+V KLKIVACDGKS D
Sbjct: 61 GKMDTYRFCDNVWTFMLSDVEFKETQEMAKVEKLKIVACDGKSVTDE 107
>gi|270009805|gb|EFA06253.1| hypothetical protein TcasGA2_TC009112 [Tribolium castaneum]
Length = 112
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 94/106 (88%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLG+TLQESLDELIQYG ITP LA KVLL FDKSIN L ++VKSRLTFK+
Sbjct: 1 MSYQLYRNTTLGHTLQESLDELIQYGQITPQLACKVLLLFDKSINMTLATRVKSRLTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSDD 106
GKLNTYRFCDNVWTF+L DVEFREV EI +V+K+KIVACDGKS D
Sbjct: 61 GKLNTYRFCDNVWTFMLNDVEFREVQEITKVDKVKIVACDGKSVGD 106
>gi|194910164|ref|XP_001982085.1| GG12397 [Drosophila erecta]
gi|195331428|ref|XP_002032403.1| GM23533 [Drosophila sechellia]
gi|195503049|ref|XP_002098488.1| GE23914 [Drosophila yakuba]
gi|195573267|ref|XP_002104615.1| GD18345 [Drosophila simulans]
gi|190656723|gb|EDV53955.1| GG12397 [Drosophila erecta]
gi|194121346|gb|EDW43389.1| GM23533 [Drosophila sechellia]
gi|194184589|gb|EDW98200.1| GE23914 [Drosophila yakuba]
gi|194200542|gb|EDX14118.1| GD18345 [Drosophila simulans]
Length = 106
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/105 (80%), Positives = 93/105 (88%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITP LA KVLLQFDKSIN AL +VK+R+TFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
GKLNTYRFCDNVWT +L DVEFREV E +V+K+KIVACDGKS +
Sbjct: 61 GKLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGKSGE 105
>gi|21064507|gb|AAM29483.1| RE44302p [Drosophila melanogaster]
Length = 106
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/105 (80%), Positives = 93/105 (88%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITP LA KVLLQ DKSIN AL +VK+R+TFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQLDKSINNALNQRVKARVTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
GKLNTYRFCDNVWT +L DVEFREV EI +V+K+KIVACDGKS +
Sbjct: 61 GKLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGKSGE 105
>gi|195145386|ref|XP_002013677.1| GL24263 [Drosophila persimilis]
gi|198452144|ref|XP_001358646.2| GA18701 [Drosophila pseudoobscura pseudoobscura]
gi|194102620|gb|EDW24663.1| GL24263 [Drosophila persimilis]
gi|198131804|gb|EAL27787.2| GA18701 [Drosophila pseudoobscura pseudoobscura]
Length = 105
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 92/104 (88%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITP LA KVLLQFDKSIN AL +VK+R+TFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
GKLNTYRFCDNVWT +L DVEFREV E +V+K+KIVACDGKS
Sbjct: 61 GKLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGKSE 104
>gi|157167549|ref|XP_001654851.1| transcription initiation factor IIA (TFIIA), gamma chain [Aedes
aegypti]
gi|108882476|gb|EAT46701.1| AAEL002140-PA [Aedes aegypti]
Length = 115
Score = 177 bits (450), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 81/105 (77%), Positives = 96/105 (91%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQE+LDELIQYG ITP LA++VL+QFDKSIN AL ++VKSR+TFK+
Sbjct: 1 MSYQLYRNTTLGNTLQETLDELIQYGQITPALAVRVLVQFDKSINSALSNRVKSRVTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
KLNTYRFCDNVWT +L DVEFREV E A+V+K+KIVACDGK+++
Sbjct: 61 AKLNTYRFCDNVWTLMLNDVEFREVHEFAKVDKVKIVACDGKNAN 105
>gi|158292095|ref|XP_313653.4| AGAP004370-PA [Anopheles gambiae str. PEST]
gi|157017271|gb|EAA09250.4| AGAP004370-PA [Anopheles gambiae str. PEST]
Length = 112
Score = 177 bits (450), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 82/103 (79%), Positives = 94/103 (91%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGNTLQESLDELIQYG ITP LA++VL+QFDKSIN AL ++VKSR+TFK+
Sbjct: 1 MTYQLYRNTTLGNTLQESLDELIQYGQITPQLAVRVLVQFDKSINAALSNRVKSRVTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
KLNTYRFCDNVWT +L DVEFREV E ARV+K+KIVACDGK+
Sbjct: 61 AKLNTYRFCDNVWTLMLNDVEFREVHEFARVDKVKIVACDGKN 103
>gi|91086493|ref|XP_970803.1| PREDICTED: similar to transcription initiation factor IIA gamma
chain [Tribolium castaneum]
Length = 112
Score = 177 bits (450), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 85/103 (82%), Positives = 93/103 (90%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLG+TLQESLDELIQYG ITP LA KVLL FDKSIN L ++VKSRLTFK+
Sbjct: 1 MSYQLYRNTTLGHTLQESLDELIQYGQITPQLACKVLLLFDKSINMTLATRVKSRLTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
GKLNTYRFCDNVWTF+L DVEFREV EI +V+K+KIVACDGKS
Sbjct: 61 GKLNTYRFCDNVWTFMLNDVEFREVQEITKVDKVKIVACDGKS 103
>gi|157167547|ref|XP_001654850.1| transcription initiation factor IIA (TFIIA), gamma chain [Aedes
aegypti]
gi|108882475|gb|EAT46700.1| AAEL002154-PA [Aedes aegypti]
Length = 107
Score = 177 bits (448), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 81/102 (79%), Positives = 93/102 (91%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQE+LDELIQYG ITP LA++VL+QFDKSIN AL ++VKSR+TFK+
Sbjct: 1 MSYQLYRNTTLGNTLQETLDELIQYGQITPALAVRVLVQFDKSINSALSNRVKSRVTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
KLNTYRFCDNVWT +L DVEFREV E A+V+K+KIVACDGK
Sbjct: 61 AKLNTYRFCDNVWTLMLNDVEFREVHEFAKVDKVKIVACDGK 102
>gi|170042250|ref|XP_001848846.1| transcription initiation factor IIA gamma chain [Culex
quinquefasciatus]
gi|167865753|gb|EDS29136.1| transcription initiation factor IIA gamma chain [Culex
quinquefasciatus]
Length = 109
Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/103 (78%), Positives = 93/103 (90%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQE+LDELIQYG ITP LA++VL+QFDKSIN AL ++VKSR+TFK+
Sbjct: 1 MSYQLYRNTTLGNTLQETLDELIQYGQITPALAVRVLVQFDKSINAALSNRVKSRVTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
KLNTYRFCDNVWT +L VEFREV E A+V+K+KIVACDGKS
Sbjct: 61 AKLNTYRFCDNVWTLMLNQVEFREVHEFAKVDKVKIVACDGKS 103
>gi|346473245|gb|AEO36467.1| hypothetical protein [Amblyomma maculatum]
gi|427786133|gb|JAA58518.1| Putative transcription initiation factor iia subunit 2
[Rhipicephalus pulchellus]
gi|442757843|gb|JAA71080.1| Putative transcription initiation factor iia gamma chain [Ixodes
ricinus]
Length = 107
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/105 (77%), Positives = 94/105 (89%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQ G ITP LA+KVLLQFDK+IN AL ++VK+RLTFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQCGQITPHLALKVLLQFDKAINNALANRVKTRLTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
G L+TYRFCDNVWTFVL DVEFREV E+ + +K+KIVACDGK+ +
Sbjct: 61 GHLSTYRFCDNVWTFVLKDVEFREVQELVKADKVKIVACDGKNQN 105
>gi|241628895|ref|XP_002410024.1| transcription initiation factor IIA gamma chain, putative [Ixodes
scapularis]
gi|327488497|sp|B7Q1Q9.1|T2AG_IXOSC RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|215503287|gb|EEC12781.1| transcription initiation factor IIA gamma chain, putative [Ixodes
scapularis]
Length = 118
Score = 174 bits (440), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 81/102 (79%), Positives = 92/102 (90%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQ G ITP LA+KVLLQFDK+IN AL ++VK+RLTFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQCGQITPHLALKVLLQFDKAINNALANRVKTRLTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
G L+TYRFCDNVWTFVL DVEFREV E+ + +K+KIVACDGK
Sbjct: 61 GHLSTYRFCDNVWTFVLKDVEFREVQELVKADKVKIVACDGK 102
>gi|387915566|gb|AFK11392.1| transcription initiation factor IIA subunit 2 [Callorhinchus milii]
Length = 106
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/105 (74%), Positives = 92/105 (87%), Gaps = 1/105 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGKSSD
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELVKVDKVKIVACDGKSSD 104
>gi|321476568|gb|EFX87528.1| hypothetical protein DAPPUDRAFT_230366 [Daphnia pulex]
Length = 110
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/103 (71%), Positives = 93/103 (90%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGNTLQE+LDELIQ+G ITP LA+KVL+ FD+++N +L KVK+RLTFK+
Sbjct: 1 MAYQLYRNTTLGNTLQETLDELIQFGQITPQLALKVLVHFDRTMNNSLAQKVKNRLTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
GKLNTYRFCDNVWTF+L+DVEFR+V+E+ + +KIVACDGK+
Sbjct: 61 GKLNTYRFCDNVWTFLLSDVEFRDVSELCKGETVKIVACDGKA 103
>gi|225709032|gb|ACO10362.1| Transcription initiation factor IIA subunit 2 [Caligus
rogercresseyi]
gi|225711164|gb|ACO11428.1| Transcription initiation factor IIA subunit 2 [Caligus
rogercresseyi]
Length = 111
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 74/104 (71%), Positives = 94/104 (90%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLG+TL+E+LDEL+Q +TP LA+KVLLQFD+SIN AL ++VK+RL FK+
Sbjct: 1 MSYQLYRNTTLGHTLRETLDELMQMQLLTPALALKVLLQFDRSINNALNTRVKTRLNFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
KLNTYRFCDNVWTF+L DVEF+EV+E+A+V+++KIVACD KS+
Sbjct: 61 DKLNTYRFCDNVWTFMLNDVEFKEVSELAKVDRVKIVACDAKSA 104
>gi|332235814|ref|XP_003267100.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 1
[Nomascus leucogenys]
gi|332235816|ref|XP_003267101.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 2
[Nomascus leucogenys]
gi|441616011|ref|XP_004088335.1| PREDICTED: transcription initiation factor IIA subunit 2 [Nomascus
leucogenys]
Length = 109
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/104 (73%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQY ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQYQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNT 103
>gi|405964663|gb|EKC30120.1| Transcription initiation factor IIA subunit 2 [Crassostrea gigas]
Length = 107
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/104 (75%), Positives = 93/104 (89%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLG+TLQESLDELIQ G ITP LA+KVLLQFDK+IN AL ++VK+R+ K
Sbjct: 1 MSYQLYRNTTLGHTLQESLDELIQGGQITPQLALKVLLQFDKAINTALANRVKNRIQLK- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
GKLNTYRFCDNVWTFVL +V+FR+V E+A+ +K+KIVACDGKS+
Sbjct: 60 GKLNTYRFCDNVWTFVLNNVDFRDVQELAKCDKVKIVACDGKSA 103
>gi|20140818|sp|Q9IA78.1|T2AG_PAROL RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|7340064|gb|AAF61068.1|AF220549_1 TFIIA P12 subunit [Paralichthys olivaceus]
Length = 111
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 91/103 (88%), Gaps = 1/103 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL S+V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALASRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
G LNTYRFCDNVWTFVL DVEFREV ++ +V+K+KIVACDGKS
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGKS 102
>gi|281342321|gb|EFB17905.1| hypothetical protein PANDA_012452 [Ailuropoda melanoleuca]
gi|351698418|gb|EHB01337.1| Transcription initiation factor IIA subunit 2, partial
[Heterocephalus glaber]
Length = 102
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 90/103 (87%), Gaps = 1/103 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGKS
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKS 102
>gi|126165282|ref|NP_001075177.1| transcription initiation factor IIA subunit 2 [Gallus gallus]
gi|121308871|dbj|BAF43532.1| general transcription facter IIA subunit 2 [Gallus gallus]
Length = 109
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELVKVDKVKIVACDGKNT 103
>gi|391341152|ref|XP_003744895.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Metaseiulus occidentalis]
Length = 106
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/102 (72%), Positives = 89/102 (87%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLG TLQ+SLDEL+ G I+ LA++VLLQFDKSIN AL ++V+SRL+FK+
Sbjct: 1 MSYQLYRNTTLGQTLQDSLDELVASGQISQQLAVRVLLQFDKSINNALATRVRSRLSFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
G L+TYRFCDNVWTFVL +VEFREV E+ R +K+KIVACDGK
Sbjct: 61 GHLSTYRFCDNVWTFVLKNVEFREVQELVRADKVKIVACDGK 102
>gi|225710538|gb|ACO11115.1| Transcription initiation factor IIA subunit 2 [Caligus
rogercresseyi]
Length = 111
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/104 (69%), Positives = 93/104 (89%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLG+ L+E+LDEL+Q +TP LA++VLLQFD+SIN AL ++VK+RL FK+
Sbjct: 1 MSYQLYRNTTLGHALRETLDELMQMQLLTPALALEVLLQFDRSINNALNTRVKTRLNFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
KLNTYRFCDNVWTF+L DVEF+EV+E+A+V+++KIVACD KS+
Sbjct: 61 DKLNTYRFCDNVWTFMLNDVEFKEVSELAKVDRVKIVACDAKSA 104
>gi|350537373|ref|NP_001232523.1| putative general transcription factor IIA small subunit
[Taeniopygia guttata]
gi|149410826|ref|XP_001509605.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Ornithorhynchus anatinus]
gi|197127217|gb|ACH43715.1| putative general transcription factor IIA small subunit
[Taeniopygia guttata]
gi|449270574|gb|EMC81233.1| Transcription initiation factor IIA subunit 2 [Columba livia]
Length = 109
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELVKVDKVKIVACDGKNT 103
>gi|301775817|ref|XP_002923329.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Ailuropoda melanoleuca]
Length = 114
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 90/103 (87%), Gaps = 1/103 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGKS
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKS 102
>gi|4758486|ref|NP_004483.1| transcription initiation factor IIA subunit 2 [Homo sapiens]
gi|83035115|ref|NP_001032708.1| transcription initiation factor IIA subunit 2 [Bos taurus]
gi|55642219|ref|XP_510452.1| PREDICTED: uncharacterized protein LOC453483 isoform 4 [Pan
troglodytes]
gi|114657367|ref|XP_001173111.1| PREDICTED: uncharacterized protein LOC453483 isoform 3 [Pan
troglodytes]
gi|397515443|ref|XP_003827961.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 1
[Pan paniscus]
gi|397515445|ref|XP_003827962.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 2
[Pan paniscus]
gi|410049246|ref|XP_003952713.1| PREDICTED: uncharacterized protein LOC453483 [Pan troglodytes]
gi|426233202|ref|XP_004010606.1| PREDICTED: transcription initiation factor IIA subunit 2 [Ovis
aries]
gi|426379277|ref|XP_004056327.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 1
[Gorilla gorilla gorilla]
gi|426379279|ref|XP_004056328.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 2
[Gorilla gorilla gorilla]
gi|426379281|ref|XP_004056329.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 3
[Gorilla gorilla gorilla]
gi|1729806|sp|P52657.1|T2AG_HUMAN RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=TFIIA p12 subunit; Short=TFIIA-12;
Short=TFIIAS; AltName: Full=Transcription initiation
factor IIA gamma chain; Short=TFIIA-gamma
gi|555900|gb|AAA64951.1| transcription factor IIA small 12 kDa subunit [Homo sapiens]
gi|558214|emb|CAA57357.1| smallest subunit of TFIIA [Homo sapiens]
gi|710403|gb|AAB58247.1| transcription factor TFIIA small subunit p12 [Homo sapiens]
gi|12653047|gb|AAH00287.1| General transcription factor IIA, 2, 12kDa [Homo sapiens]
gi|12804933|gb|AAH01919.1| General transcription factor IIA, 2, 12kDa [Homo sapiens]
gi|30583563|gb|AAP36026.1| general transcription factor IIA, 2, 12kDa [Homo sapiens]
gi|49457380|emb|CAG46989.1| GTF2A2 [Homo sapiens]
gi|60656075|gb|AAX32601.1| general transcription factor IIA 2 [synthetic construct]
gi|81674371|gb|AAI09832.1| General transcription factor IIA, 2, 12kDa [Bos taurus]
gi|119597979|gb|EAW77573.1| general transcription factor IIA, 2, 12kDa, isoform CRA_a [Homo
sapiens]
gi|119597980|gb|EAW77574.1| general transcription factor IIA, 2, 12kDa, isoform CRA_a [Homo
sapiens]
gi|123980684|gb|ABM82171.1| general transcription factor IIA, 2, 12kDa [synthetic construct]
gi|123995511|gb|ABM85357.1| general transcription factor IIA, 2, 12kDa [synthetic construct]
gi|208966358|dbj|BAG73193.1| general transcription factor IIA, 2, 12kDa [synthetic construct]
gi|296483231|tpg|DAA25346.1| TPA: general transcription factor IIA, 2, 12kDa [Bos taurus]
gi|410210114|gb|JAA02276.1| general transcription factor IIA, 2, 12kDa [Pan troglodytes]
gi|410251320|gb|JAA13627.1| general transcription factor IIA, 2, 12kDa [Pan troglodytes]
gi|410289436|gb|JAA23318.1| general transcription factor IIA, 2, 12kDa [Pan troglodytes]
gi|410337355|gb|JAA37624.1| general transcription factor IIA, 2, 12kDa [Pan troglodytes]
gi|431895951|gb|ELK05369.1| Transcription initiation factor IIA subunit 2 [Pteropus alecto]
gi|440899108|gb|ELR50473.1| Transcription initiation factor IIA subunit 2 [Bos grunniens mutus]
Length = 109
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNT 103
>gi|225717684|gb|ACO14688.1| Transcription initiation factor IIA subunit 2 [Caligus clemensi]
Length = 110
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/107 (68%), Positives = 95/107 (88%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLG+TL+E+LDEL+Q +TP LA+KVLLQFD+SIN AL +++K+RL FK+
Sbjct: 1 MSYQLYRNTTLGHTLRETLDELMQMQLLTPALALKVLLQFDRSINTALNTRLKTRLNFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSDDR 107
KLNTYRFCDNVWTF+L +VEF+EV+E+A+V+++KIVACD KS+ R
Sbjct: 61 EKLNTYRFCDNVWTFMLNEVEFKEVSELAKVDRVKIVACDAKSAITR 107
>gi|126277261|ref|XP_001374038.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Monodelphis domestica]
gi|395502575|ref|XP_003755654.1| PREDICTED: transcription initiation factor IIA subunit 2
[Sarcophilus harrisii]
Length = 109
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNT 103
>gi|16758064|ref|NP_445797.1| transcription initiation factor IIA subunit 2 [Rattus norvegicus]
gi|87299617|ref|NP_001034608.1| transcription initiation factor IIA subunit 2 [Mus musculus]
gi|384475645|ref|NP_001244983.1| transcription initiation factor IIA subunit 2 [Macaca mulatta]
gi|57108247|ref|XP_535502.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 1
[Canis lupus familiaris]
gi|291402911|ref|XP_002718244.1| PREDICTED: general transcription factor IIA, 2, 12kDa [Oryctolagus
cuniculus]
gi|293340271|ref|XP_002724568.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Rattus norvegicus]
gi|297696778|ref|XP_002825557.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 2
[Pongo abelii]
gi|311244636|ref|XP_003121518.1| PREDICTED: transcription initiation factor IIA subunit 2-like
isoform 1 [Sus scrofa]
gi|311244638|ref|XP_003121519.1| PREDICTED: transcription initiation factor IIA subunit 2-like
isoform 2 [Sus scrofa]
gi|311244640|ref|XP_003121520.1| PREDICTED: transcription initiation factor IIA subunit 2-like
isoform 3 [Sus scrofa]
gi|338717888|ref|XP_003363718.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Equus caballus]
gi|345795012|ref|XP_864467.2| PREDICTED: transcription initiation factor IIA subunit 2 isoform 2
[Canis lupus familiaris]
gi|348555455|ref|XP_003463539.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Cavia porcellus]
gi|354465252|ref|XP_003495094.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Cricetulus griseus]
gi|402874451|ref|XP_003901051.1| PREDICTED: transcription initiation factor IIA subunit 2 [Papio
anubis]
gi|410961134|ref|XP_003987140.1| PREDICTED: transcription initiation factor IIA subunit 2 [Felis
catus]
gi|2811071|sp|O08950.1|T2AG_RAT RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|47117190|sp|Q80ZM7.2|T2AG_MOUSE RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|2149998|gb|AAB58717.1| TFIIA small subunit [Rattus norvegicus]
gi|74146762|dbj|BAE41360.1| unnamed protein product [Mus musculus]
gi|74193485|dbj|BAE20680.1| unnamed protein product [Mus musculus]
gi|148694233|gb|EDL26180.1| mCG2938, isoform CRA_a [Mus musculus]
gi|148694236|gb|EDL26183.1| mCG2938, isoform CRA_a [Mus musculus]
gi|148694240|gb|EDL26187.1| mCG2938, isoform CRA_a [Mus musculus]
gi|149028856|gb|EDL84197.1| general transcription factor IIa 2, isoform CRA_c [Rattus
norvegicus]
gi|149028857|gb|EDL84198.1| general transcription factor IIa 2, isoform CRA_c [Rattus
norvegicus]
gi|149028858|gb|EDL84199.1| general transcription factor IIa 2, isoform CRA_c [Rattus
norvegicus]
gi|335775678|gb|AEH58652.1| transcription initiation factor IIA subunit-like protein [Equus
caballus]
gi|383417801|gb|AFH32114.1| transcription initiation factor IIA subunit 2 [Macaca mulatta]
gi|384944484|gb|AFI35847.1| transcription initiation factor IIA subunit 2 [Macaca mulatta]
Length = 109
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNT 103
>gi|344293342|ref|XP_003418382.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Loxodonta africana]
gi|395822261|ref|XP_003784440.1| PREDICTED: transcription initiation factor IIA subunit 2 [Otolemur
garnettii]
gi|417395771|gb|JAA44928.1| Putative transcription initiation factor iia subunit 2-like protein
[Desmodus rotundus]
Length = 109
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNT 103
>gi|74224980|dbj|BAE38203.1| unnamed protein product [Mus musculus]
Length = 145
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAHRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNT 103
>gi|403274557|ref|XP_003929041.1| PREDICTED: transcription initiation factor IIA subunit 2 [Saimiri
boliviensis boliviensis]
Length = 109
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 90/104 (86%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V K+KIVACDGK++
Sbjct: 60 GALNTYRFCDNVWTFVLNDVEFREVTELIKVEKVKIVACDGKNT 103
>gi|291222339|ref|XP_002731169.1| PREDICTED: general transcription factor IIA, 2, 12kDa-like
[Saccoglossus kowalevskii]
Length = 108
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/104 (74%), Positives = 89/104 (85%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGN+LQESLDELIQ I+P LA++VLLQFDK+IN AL +VK+R+ FK
Sbjct: 1 MSYQLYRNTTLGNSLQESLDELIQSQQISPQLALQVLLQFDKAINNALSHRVKNRINFK- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV ++ +V K+KIVA DGKSS
Sbjct: 60 GHLNTYRFCDNVWTFVLNDVEFREVTDLVKVEKVKIVAVDGKSS 103
>gi|390480702|ref|XP_002763716.2| PREDICTED: transcription initiation factor IIA subunit 2-like
[Callithrix jacchus]
Length = 122
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 89/103 (86%), Gaps = 1/103 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
G LNTYRFCDNVWTFVL DVEFREV E+ +V K+KIVACDGKS
Sbjct: 60 GALNTYRFCDNVWTFVLNDVEFREVTELIKVEKVKIVACDGKS 102
>gi|432958696|ref|XP_004086112.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Oryzias latipes]
Length = 109
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL ++V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV ++ +V+K+KIVACDGK+S
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGKNS 103
>gi|443692949|gb|ELT94433.1| hypothetical protein CAPTEDRAFT_146781 [Capitella teleta]
Length = 105
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/104 (74%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLD+LIQ G ITP LA+KVL QFD++IN AL ++VK+++TFK
Sbjct: 1 MSYQLYRNTTLGNTLQESLDDLIQCGQITPELALKVLQQFDEAINTALSTRVKNKVTFK- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEF+EV+E+ V+K+KIVACDGK
Sbjct: 60 GHLNTYRFCDNVWTFVLDDVEFKEVSELVTVDKVKIVACDGKGG 103
>gi|185134307|ref|NP_001117838.1| transcription initiation factor IIA subunit 2 [Oncorhynchus mykiss]
gi|20140636|sp|Q90YG6.1|T2AG_ONCMY RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|14716990|emb|CAC44187.1| putative TFIIA gamma chain [Oncorhynchus mykiss]
gi|209730768|gb|ACI66253.1| Transcription initiation factor IIA subunit 2 [Salmo salar]
gi|209736464|gb|ACI69101.1| Transcription initiation factor IIA subunit 2 [Salmo salar]
gi|225703850|gb|ACO07771.1| Transcription initiation factor IIA gamma chain [Oncorhynchus
mykiss]
gi|303661137|gb|ADM16024.1| Transcription initiation factor IIA subunit 2 [Salmo salar]
gi|303664308|gb|ADM16138.1| Transcription initiation factor IIA subunit 2 [Salmo salar]
Length = 108
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL ++V++R+ FK
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFK- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV ++ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGKNT 103
>gi|410912542|ref|XP_003969748.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Takifugu rubripes]
Length = 115
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 75/103 (72%), Positives = 91/103 (88%), Gaps = 1/103 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL ++V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
G LNTYRFCDNVWTFVL DVEFREV ++ +V+K+KIVACDGKS
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGKS 102
>gi|348500470|ref|XP_003437796.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Oreochromis niloticus]
Length = 136
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 91/103 (88%), Gaps = 1/103 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL ++V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGKS
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELVKVDKVKIVACDGKS 102
>gi|225718774|gb|ACO15233.1| Transcription initiation factor IIA subunit 2 [Caligus clemensi]
Length = 110
Score = 160 bits (405), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 72/107 (67%), Positives = 94/107 (87%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLG+T +E+LDEL+Q +TP LA+KVLLQFD+SIN AL +++K+RL FK+
Sbjct: 1 MSYQLYRNTTLGHTFRETLDELMQMQLLTPALALKVLLQFDRSINTALNTRLKTRLNFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSDDR 107
KLNTYRFCDNVWTF+L +VEF+EV+E+A+V+++KIVACD KS+ R
Sbjct: 61 EKLNTYRFCDNVWTFMLNEVEFKEVSELAKVDRVKIVACDAKSAITR 107
>gi|225715064|gb|ACO13378.1| Transcription initiation factor IIA subunit 2 [Esox lucius]
Length = 108
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/104 (71%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL ++V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV ++ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGKNT 103
>gi|66472540|ref|NP_001018441.1| transcription initiation factor IIA subunit 2 [Danio rerio]
gi|63101237|gb|AAH95322.1| Zgc:110584 [Danio rerio]
gi|182891902|gb|AAI65482.1| Zgc:110584 protein [Danio rerio]
Length = 109
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/104 (71%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL ++V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV ++ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGKNT 103
>gi|407261929|ref|XP_003945923.1| PREDICTED: transcription initiation factor IIA subunit 2-like [Mus
musculus]
gi|148683953|gb|EDL15900.1| mCG48744 [Mus musculus]
Length = 109
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/104 (71%), Positives = 90/104 (86%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP L ++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLVLQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNT 103
>gi|225707636|gb|ACO09664.1| Transcription initiation factor IIA gamma chain [Osmerus mordax]
Length = 109
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/104 (71%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL ++V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV ++ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGKNT 103
>gi|38492545|pdb|1NVP|D Chain D, Human TfiiaTBPDNA COMPLEX
Length = 108
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/103 (71%), Positives = 90/103 (87%), Gaps = 1/103 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+ G
Sbjct: 1 AYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR-G 59
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 SLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNT 102
>gi|52346124|ref|NP_001005107.1| general transcription factor IIA, 2, 12kDa [Xenopus (Silurana)
tropicalis]
gi|148226765|ref|NP_001080922.1| general transcription factor IIA, 2, 12kDa [Xenopus laevis]
gi|301632362|ref|XP_002945255.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Xenopus (Silurana) tropicalis]
gi|33312520|gb|AAQ04073.1|AF424778_1 transcription factor IIA small subunit [Xenopus laevis]
gi|34099898|gb|AAP44970.1| transcription factor IIA small subunit [Xenopus laevis]
gi|49118757|gb|AAH72888.1| TFIIAg protein [Xenopus laevis]
gi|49900038|gb|AAH77041.1| MGC89923 protein [Xenopus (Silurana) tropicalis]
gi|57033116|gb|AAH88977.1| TFIIAg protein [Xenopus laevis]
Length = 109
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/104 (70%), Positives = 90/104 (86%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ I P LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQINPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV ++ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGKNT 103
>gi|195977142|gb|ACG63689.1| general transcription factor IIa 2 (predicted) [Otolemur garnettii]
Length = 109
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/104 (71%), Positives = 90/104 (86%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK++N AL +V++R+ K
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAVNSALAQRVRNRVNSK- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNT 103
>gi|225704122|gb|ACO07907.1| Transcription initiation factor IIA gamma chain [Oncorhynchus
mykiss]
Length = 108
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL ++V +R+ FK
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVCNRVNFK- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV ++ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGKNT 103
>gi|213513642|ref|NP_001135014.1| Transcription initiation factor IIA subunit 2 [Salmo salar]
gi|209738024|gb|ACI69881.1| Transcription initiation factor IIA subunit 2 [Salmo salar]
Length = 108
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/104 (71%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL ++V++R+ FK
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFK- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWT VL DVEFREV ++ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTIVLNDVEFREVTDLVKVDKVKIVACDGKNT 103
>gi|355692759|gb|EHH27362.1| General transcription factor IIA subunit 2 [Macaca mulatta]
Length = 109
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/104 (71%), Positives = 90/104 (86%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTL N+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLRNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNT 103
>gi|226372334|gb|ACO51792.1| Transcription initiation factor IIA subunit 2 [Rana catesbeiana]
Length = 109
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/104 (70%), Positives = 89/104 (85%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ I P LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQINPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV ++ +V K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTDLVKVGKVKIVACDGKNT 103
>gi|189065230|dbj|BAG34953.1| unnamed protein product [Homo sapiens]
Length = 109
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/104 (71%), Positives = 90/104 (86%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL VEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNYVEFREVTELIKVDKVKIVACDGKNT 103
>gi|391336955|ref|XP_003742840.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Metaseiulus occidentalis]
Length = 106
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 85/106 (80%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYR TTLG+TLQE+LDE + G I+ LA +VL QFDKSI+ ++VKSRL+FK+
Sbjct: 1 MSYQLYRTTTLGHTLQEALDEFVASGQISQALACQVLSQFDKSISNVFATRVKSRLSFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSDD 106
G+L+TYRFCDNVWT VL +VEFRE+ EI + + +KIVAC+ +S ++
Sbjct: 61 GRLSTYRFCDNVWTLVLKNVEFREIQEIVKADTVKIVACESRSGNN 106
>gi|387019155|gb|AFJ51695.1| Transcription initiation factor IIA subunit 2 [Crotalus adamanteus]
Length = 109
Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTEVVKVDKVKIVACDGKNT 103
>gi|156546312|ref|XP_001606238.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Nasonia vitripennis]
Length = 115
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/103 (66%), Positives = 84/103 (81%), Gaps = 2/103 (1%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTL+E+LD+L+ Y I+ LA+KVLLQFDK++N AL +KVKSRL FK+
Sbjct: 1 MSYQLYRNTTLGNTLEETLDDLLAYDQISRGLAVKVLLQFDKAMNQALTTKVKSRLNFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEI--ARVNKLKIVACDG 101
G L TYRFCDNVWT +L DVEFR+ + V+K+KIVAC+G
Sbjct: 61 GNLKTYRFCDNVWTLMLHDVEFRDSQRVDSIHVDKVKIVACEG 103
>gi|354483073|ref|XP_003503719.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Cricetulus griseus]
Length = 109
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/104 (66%), Positives = 84/104 (80%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLY NTTLGN+LQE LDELIQ ITP LA +VLLQ DK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYGNTTLGNSLQEGLDELIQSQQITPQLAFQVLLQCDKAINSALAQRVRNRVNFRD 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVA GK++
Sbjct: 61 -SLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVAYGGKNT 103
>gi|313231289|emb|CBY08404.1| unnamed protein product [Oikopleura dioica]
Length = 114
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 85/104 (81%), Gaps = 1/104 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLG TL +SLDELIQ I+ +L KVL +FDK+IN AL +KV++R+TFK
Sbjct: 1 MNYQLYRNTTLGTTLIDSLDELIQQQAISHSLRQKVLEEFDKAINYALANKVRNRITFK- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
GKLNTYRFCDNVWTFV+ + EFREV + +V K+K+VACDGK +
Sbjct: 60 GKLNTYRFCDNVWTFVIENAEFREVIDCIQVPKVKVVACDGKGN 103
>gi|312371194|gb|EFR19440.1| hypothetical protein AND_22420 [Anopheles darlingi]
Length = 632
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 77/91 (84%)
Query: 4 QLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKL 63
+LYRNTTLG LQE+LDE++QYG ITP L +VL+QFDKSIN AL ++VKSR+TFK+GKL
Sbjct: 115 RLYRNTTLGCMLQETLDEMLQYGQITPHLFSRVLVQFDKSINAALSNRVKSRVTFKAGKL 174
Query: 64 NTYRFCDNVWTFVLTDVEFREVAEIARVNKL 94
NTYRFCDNVWT +L DVEFREV E A+ ++
Sbjct: 175 NTYRFCDNVWTLMLNDVEFREVHEFAKYGQI 205
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 60/72 (83%)
Query: 19 LDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLT 78
+ E +YG ITP L+ +VL+QFDKSIN AL ++VKSR+TFK+GKLNTYRFCDNVWT +L
Sbjct: 196 VHEFAKYGQITPHLSGRVLIQFDKSINAALSNRVKSRVTFKAGKLNTYRFCDNVWTLMLN 255
Query: 79 DVEFREVAEIAR 90
DVEFREV E A+
Sbjct: 256 DVEFREVHEFAK 267
>gi|156402941|ref|XP_001639848.1| predicted protein [Nematostella vectensis]
gi|156226979|gb|EDO47785.1| predicted protein [Nematostella vectensis]
Length = 101
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/102 (70%), Positives = 90/102 (88%), Gaps = 1/102 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGN+LQESLDELIQ I+P LA++VLL FDK+IN AL +KVK+++TFK
Sbjct: 1 MSYQLYRNTTLGNSLQESLDELIQSQQISPQLALQVLLHFDKAINHALSNKVKNKITFK- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
G LNTYRFCDNVWTFVL +V+FR+V ++ +V+K+K+VACDGK
Sbjct: 60 GHLNTYRFCDNVWTFVLENVDFRDVGDVVKVDKVKVVACDGK 101
>gi|324508659|gb|ADY43652.1| Transcription initiation factor IIA subunit 2 [Ascaris suum]
Length = 113
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 82/106 (77%), Gaps = 2/106 (1%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQ+YR TTLG LQ++LDE IQ G ITP LAMKVL FDK+IN AL +VK+++TF++
Sbjct: 1 MAYQMYRTTTLGVALQKALDEFIQDGLITPQLAMKVLTTFDKAINKALQVRVKNKVTFRA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEI--ARVNKLKIVACDGKSS 104
KL TYRFCDNVWTFV+ V+FRE + RV+++K VACDG+S
Sbjct: 61 DKLVTYRFCDNVWTFVMEGVDFREASNSFGDRVDRVKFVACDGRSP 106
>gi|195996563|ref|XP_002108150.1| hypothetical protein TRIADDRAFT_49735 [Trichoplax adhaerens]
gi|190588926|gb|EDV28948.1| hypothetical protein TRIADDRAFT_49735 [Trichoplax adhaerens]
Length = 113
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 84/107 (78%), Gaps = 4/107 (3%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLG +LQE+L+ELIQ I P LA+ VLLQFDK+IN AL +++++R++FK
Sbjct: 1 MSYQLYRNTTLGQSLQETLEELIQTQQIDPDLALIVLLQFDKTINSALANRLRTRMSFK- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVA---EIARVNKLKIVACDGKSS 104
G L TYRFCD+VWT ++ + EFRE +V+KLK+VACDGK+S
Sbjct: 60 GHLRTYRFCDSVWTLIVENAEFRETGSDTHSFKVDKLKVVACDGKTS 106
>gi|47209483|emb|CAF89599.1| unnamed protein product [Tetraodon nigroviridis]
Length = 84
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/83 (75%), Positives = 73/83 (87%), Gaps = 1/83 (1%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL ++V++R+ FK
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFK- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFR 83
G LNTYRFCDNVWTFVL DVEFR
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFR 82
>gi|198418949|ref|XP_002126495.1| PREDICTED: similar to general transcription factor IIA, 2, 12kDa
[Ciona intestinalis]
Length = 108
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/103 (66%), Positives = 86/103 (83%), Gaps = 1/103 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYR+TTLGN+LQESLDELIQ ITP LA++VLL+FDK+IN L S+V++R+TF+
Sbjct: 1 MSYQLYRSTTLGNSLQESLDELIQSQQITPQLALRVLLEFDKAINHGLSSRVRNRVTFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
G LNTYRFCDNVWTFVL + EF + +V+K+KIVACDG++
Sbjct: 60 GDLNTYRFCDNVWTFVLKNTEFTDCLVKVKVDKVKIVACDGRN 102
>gi|195469637|ref|XP_002099743.1| GE16551 [Drosophila yakuba]
gi|194187267|gb|EDX00851.1| GE16551 [Drosophila yakuba]
Length = 104
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 78/103 (75%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQ YR TTLG TLQE+L+E+IQ G IT LA VL ++DKS+ AL KV +++ F +
Sbjct: 1 MNYQHYRATTLGTTLQETLEEMIQSGEITQELANAVLQKYDKSVTNALSKKVTTKINFTA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
G+L TYRFCDNVWT +L DVEFR+ E+ +V+ +K+VAC GKS
Sbjct: 61 GRLQTYRFCDNVWTLILKDVEFRKGQEVLQVDAVKVVACLGKS 103
>gi|393906374|gb|EJD74262.1| hypothetical protein LOAG_18400 [Loa loa]
Length = 111
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 80/106 (75%), Gaps = 2/106 (1%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYR+TTLG L+ +LDE ++ GTITP+LA VL FDK IN AL +VK+++ FK+
Sbjct: 1 MSYQLYRSTTLGIALRSTLDEFVEDGTITPSLAQTVLTTFDKCINRALSQRVKNKVNFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIAR--VNKLKIVACDGKSS 104
KL YRFCDNVWTFV+ +VEFR+V + V+++KIVACD ++
Sbjct: 61 DKLKAYRFCDNVWTFVMENVEFRDVTQPVDGIVDRVKIVACDASAA 106
>gi|402592981|gb|EJW86908.1| transcription initiation factor IIA subunit 2 [Wuchereria
bancrofti]
Length = 111
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 80/106 (75%), Gaps = 2/106 (1%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYR+TTLG L+ +LDE ++ GTITP+LA VL FDK IN AL +VK+++ FK+
Sbjct: 1 MSYQLYRSTTLGIALRSTLDEFVEDGTITPSLAQTVLTTFDKCINRALSQRVKNKVNFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIAR--VNKLKIVACDGKSS 104
KL YRFCDNVWTFV+ +VEFR+V + V+++KIVACD ++
Sbjct: 61 DKLKAYRFCDNVWTFVMENVEFRDVTQPVDGVVDRVKIVACDASAA 106
>gi|170584870|ref|XP_001897214.1| Transcription initiation factor IIA, gamma subunit, helical domain
containing protein [Brugia malayi]
gi|158595368|gb|EDP33927.1| Transcription initiation factor IIA, gamma subunit, helical domain
containing protein [Brugia malayi]
Length = 495
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 80/106 (75%), Gaps = 2/106 (1%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYR+TTLG L+ +LDE ++ GTITP+LA VL FDK IN AL +VK+++ FK+
Sbjct: 385 MSYQLYRSTTLGIALRSTLDEFVEDGTITPSLAQTVLTTFDKCINRALSQRVKNKVNFKA 444
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIAR--VNKLKIVACDGKSS 104
KL YRFCDNVWTFV+ +VEFR+V + V+++KIVACD ++
Sbjct: 445 DKLKAYRFCDNVWTFVMENVEFRDVTQPVDGVVDRVKIVACDASAA 490
>gi|339245513|ref|XP_003378682.1| protein YIPF5 [Trichinella spiralis]
gi|316972395|gb|EFV56073.1| protein YIPF5 [Trichinella spiralis]
Length = 331
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 56/94 (59%), Positives = 74/94 (78%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLG+TLQE+LDE IQ G IT LA KVL +D+++N AL +KV+S++ F++
Sbjct: 1 MAYQLYRNTTLGSTLQETLDEFIQSGQITQQLAFKVLQAYDRTMNKALSTKVRSKIQFRA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKL 94
GKL TYRFCDNVWTFV+ +EFR+ E+ K+
Sbjct: 61 GKLCTYRFCDNVWTFVMEQIEFRDSHEVMFAEKI 94
>gi|380799729|gb|AFE71740.1| transcription initiation factor IIA subunit 2, partial [Macaca
mulatta]
Length = 90
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Query: 20 DELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLTD 79
DELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+ G LNTYRFCDNVWTFVL D
Sbjct: 1 DELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR-GSLNTYRFCDNVWTFVLND 59
Query: 80 VEFREVAEIARVNKLKIVACDGKSS 104
VEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 VEFREVTELIKVDKVKIVACDGKNT 84
>gi|194912209|ref|XP_001982456.1| GG12724 [Drosophila erecta]
gi|190648132|gb|EDV45425.1| GG12724 [Drosophila erecta]
Length = 104
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 75/102 (73%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQ YR TTLG TLQE+LDE+IQ G IT +A VL ++DKS+ AL V S++ F +
Sbjct: 1 MTYQHYRATTLGTTLQETLDEMIQSGDITEDMASVVLRKYDKSVTKALDEHVTSKINFTA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
G+L YRFCDNVWT +L DVEFR+ E+ +V+ +K+VAC GK
Sbjct: 61 GRLENYRFCDNVWTLLLKDVEFRQGQEVLQVDAVKVVACLGK 102
>gi|340375130|ref|XP_003386090.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Amphimedon queenslandica]
Length = 115
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 79/102 (77%), Gaps = 3/102 (2%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSY+LYR+TTLG LQ++LDE+I I P LA++VL QFDKS+ AL S+V++R FK
Sbjct: 1 MSYELYRHTTLGVCLQDALDEMIGTQQINPQLALRVLKQFDKSVGKALSSRVRTRYNFK- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFRE--VAEIARVNKLKIVACD 100
GKL TYR+CDNVWT ++ DVE +E A++ +VNK+KIVACD
Sbjct: 60 GKLKTYRYCDNVWTCLVQDVELKETQAADVVQVNKVKIVACD 101
>gi|168010137|ref|XP_001757761.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691037|gb|EDQ77401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 80/101 (79%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
SY+LYR +++G +L ++LDEL+ GTI+P LA+KVL+QFD+S+N AL +KVK + +FK G
Sbjct: 3 SYELYRKSSIGVSLTDALDELVTNGTISPLLAVKVLMQFDRSMNEALSTKVKVKTSFK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+L + F+ ++ V+++KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILENASFKTDNDVTAVDRVKIVACDAK 102
>gi|168032348|ref|XP_001768681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680180|gb|EDQ66619.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 79/101 (78%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
SY+LYR +++G +L ++LDEL+ GTI+P LA+KVL+QFD+S+N A +KVK++ +FK G
Sbjct: 3 SYELYRKSSIGMSLTDALDELVTNGTISPLLAVKVLMQFDRSMNEAFSTKVKAKTSFK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+L F+ ++ V+++KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILEQASFKTDNDVTAVDRVKIVACDAK 102
>gi|357135021|ref|XP_003569111.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Brachypodium distachyon]
Length = 106
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 79/101 (78%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS++T K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVTVK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+LTD +F+ +V K+KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILTDAQFKNEETTEQVGKVKIVACDSK 102
>gi|226497468|ref|NP_001152705.1| LOC100286346 [Zea mays]
gi|195611888|gb|ACG27774.1| transcription initiation factor IIA gamma chain [Zea mays]
gi|195659197|gb|ACG49066.1| transcription initiation factor IIA gamma chain [Zea mays]
gi|219887343|gb|ACL54046.1| unknown [Zea mays]
gi|413950271|gb|AFW82920.1| transcription initiation factor IIA gamma chain [Zea mays]
Length = 106
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS++T K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVSNGTLSPELAIQVLVQFDKSMTDALENQVKSKVTVK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+LTD F+ +V K+KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILTDASFKNEEATEQVGKVKIVACDSK 102
>gi|449441770|ref|XP_004138655.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Cucumis sativus]
gi|449490144|ref|XP_004158520.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Cucumis sativus]
Length = 106
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++Q GT++P LA++VL+QFDKS+ AL S+VKS++T K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTVK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+L D F+ V ++KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILQDASFKNEDSSENVGRIKIVACDSK 102
>gi|195621538|gb|ACG32599.1| transcription initiation factor IIA gamma chain [Zea mays]
Length = 106
Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++ GT +P LA++VL+QFDKS+ AL ++VKS++T K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVSNGTXSPELAIQVLVQFDKSMTDALENQVKSKVTVK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+LTD F+ +V K+KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILTDASFKNEEATEQVGKVKIVACDSK 102
>gi|225459042|ref|XP_002285630.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 1
[Vitis vinifera]
gi|359492969|ref|XP_003634490.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 2
[Vitis vinifera]
gi|147775910|emb|CAN60284.1| hypothetical protein VITISV_015528 [Vitis vinifera]
Length = 106
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++Q GT++P LA++VL+QFDKS+ AL S+VKS++T K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+L D F+ V ++KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILQDALFKNEESQENVGRVKIVACDSK 102
>gi|242089165|ref|XP_002440415.1| hypothetical protein SORBIDRAFT_09g000610 [Sorghum bicolor]
gi|241945700|gb|EES18845.1| hypothetical protein SORBIDRAFT_09g000610 [Sorghum bicolor]
Length = 106
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTDALENQVKSKVNIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+LTD F+ +V K+KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILTDASFKNEETTEQVGKVKIVACDSK 102
>gi|302142093|emb|CBI19296.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++Q GT++P LA++VL+QFDKS+ AL S+VKS++T K G
Sbjct: 60 TFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK-G 118
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+L D F+ V ++KIVACD K
Sbjct: 119 HLHTYRFCDNVWTFILQDALFKNEESQENVGRVKIVACDSK 159
>gi|115461653|ref|NP_001054426.1| Os05g0107700 [Oryza sativa Japonica Group]
gi|122169632|sp|Q0DLD3.1|T2AG_ORYSJ RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|158513184|sp|A2XZI2.2|T2AG_ORYSI RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|14719311|gb|AAK73129.1|AC079022_2 putative transcription factor IIA small subunit [Oryza sativa]
gi|28195115|gb|AAO33769.1| transcription factor IIA small subunit [Oryza sativa Indica Group]
gi|52353565|gb|AAU44131.1| putative transcription initiation factor IIA gamma chain [Oryza
sativa Japonica Group]
gi|55585041|gb|AAV53716.1| transcription factor IIA gamma subunit [Oryza sativa Indica Group]
gi|113577977|dbj|BAF16340.1| Os05g0107700 [Oryza sativa Japonica Group]
gi|215694411|dbj|BAG89404.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195944|gb|EEC78371.1| hypothetical protein OsI_18140 [Oryza sativa Indica Group]
gi|222629915|gb|EEE62047.1| hypothetical protein OsJ_16831 [Oryza sativa Japonica Group]
gi|347737139|gb|AEP20535.1| transcription factor [Oryza sativa Japonica Group]
Length = 106
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS+++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+LT+ F+ +V K+KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILTEASFKNEETTEQVGKVKIVACDSK 102
>gi|324526547|gb|ADY48689.1| Transcription initiation factor IIA subunit 2 [Ascaris suum]
Length = 111
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 75/106 (70%), Gaps = 2/106 (1%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQ+YR TTLG L+ +LDEL++ GTI+P LA V+ FDK IN AL +VK++ +FK+
Sbjct: 1 MAYQMYRTTTLGVALRNTLDELVEDGTISPPLAQNVMATFDKCINKALSQRVKNKTSFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIAR--VNKLKIVACDGKSS 104
KL YRFCDNVWTFV+ +VEFR+ + ++K VACD ++
Sbjct: 61 DKLRAYRFCDNVWTFVMENVEFRDATRPIEGVIERVKFVACDASAA 106
>gi|326926507|ref|XP_003209441.1| PREDICTED: transcription initiation factor IIA subunit 2-like,
partial [Meleagris gallopavo]
Length = 99
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
Query: 23 IQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLTDVEF 82
+Q ITP LA++VLLQFDK+IN AL +V++R+ F+ G LNTYRFCDNVWTFVL DVEF
Sbjct: 13 LQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR-GSLNTYRFCDNVWTFVLNDVEF 71
Query: 83 REVAEIARVNKLKIVACDGKSS 104
REV E+ +V+K+KIVACDGK++
Sbjct: 72 REVTELVKVDKVKIVACDGKNT 93
>gi|255572854|ref|XP_002527359.1| transcription initiation factor iia (tfiia), gamma chain, putative
[Ricinus communis]
gi|223533278|gb|EEF35031.1| transcription initiation factor iia (tfiia), gamma chain, putative
[Ricinus communis]
Length = 106
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++Q GT++P LA++VL+QFDKS+ AL S+VKS+++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+L D F+ V ++KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILQDALFKNEDSQENVGRVKIVACDSK 102
>gi|149028855|gb|EDL84196.1| general transcription factor IIa 2, isoform CRA_b [Rattus
norvegicus]
Length = 93
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Query: 20 DELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLTD 79
D L ITP LA++VLLQFDK+IN AL +V++R+ F+ G LNTYRFCDNVWTFVL D
Sbjct: 4 DSLFWSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR-GSLNTYRFCDNVWTFVLND 62
Query: 80 VEFREVAEIARVNKLKIVACDGKSS 104
VEFREV E+ +V+K+KIVACDGK++
Sbjct: 63 VEFREVTELIKVDKVKIVACDGKNT 87
>gi|15233829|ref|NP_194175.1| transcription initiation factor IIA subunit 2 [Arabidopsis
thaliana]
gi|30686529|ref|NP_849434.1| transcription initiation factor IIA subunit 2 [Arabidopsis
thaliana]
gi|297803670|ref|XP_002869719.1| transcription initiation factor IIA gamma chain [Arabidopsis lyrata
subsp. lyrata]
gi|20141796|sp|Q39236.2|T2AG_ARATH RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|2826882|emb|CAA11524.1| transcription factor IIA small subunit [Arabidopsis thaliana]
gi|5051786|emb|CAB45079.1| transcription factor IIA small subunit [Arabidopsis thaliana]
gi|7269294|emb|CAB79354.1| transcription factor IIA small subunit [Arabidopsis thaliana]
gi|18176271|gb|AAL60014.1| putative transcription factor IIA small subunit [Arabidopsis
thaliana]
gi|20465319|gb|AAM20063.1| putative transcription factor IIA small subunit [Arabidopsis
thaliana]
gi|21553865|gb|AAM62958.1| transcription factor IIA small subunit [Arabidopsis thaliana]
gi|39545876|gb|AAR28001.1| TFIIA-S [Arabidopsis thaliana]
gi|222424034|dbj|BAH19978.1| AT4G24440 [Arabidopsis thaliana]
gi|297315555|gb|EFH45978.1| transcription initiation factor IIA gamma chain [Arabidopsis lyrata
subsp. lyrata]
gi|332659504|gb|AEE84904.1| transcription initiation factor IIA subunit 2 [Arabidopsis
thaliana]
gi|332659505|gb|AEE84905.1| transcription initiation factor IIA subunit 2 [Arabidopsis
thaliana]
Length = 106
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++Q GT++P LA++VL+QFDKS+ AL S+VK++++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSMTEALESQVKTKVSIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+L D F+ V+++KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILQDAMFKSDDRQENVSRVKIVACDSK 102
>gi|341875755|gb|EGT31690.1| hypothetical protein CAEBREN_20155 [Caenorhabditis brenneri]
gi|341897597|gb|EGT53532.1| hypothetical protein CAEBREN_10283 [Caenorhabditis brenneri]
Length = 115
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 74/103 (71%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+YQLYRNTTLG LQ++LD+ I I +L+ KV+ FDKSIN LP K K+++ F++
Sbjct: 5 NYQLYRNTTLGQALQKTLDDFISEQLIPESLSKKVMDSFDKSINRILPMKAKNKVNFRAD 64
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
KL YR+CDNVWTF++ V+ R+ E V +LKIVACDG+S+
Sbjct: 65 KLRAYRYCDNVWTFIVEQVDLRDAVEGGTVARLKIVACDGQST 107
>gi|255070253|ref|XP_002507208.1| predicted protein [Micromonas sp. RCC299]
gi|226522483|gb|ACO68466.1| predicted protein [Micromonas sp. RCC299]
Length = 111
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 79/106 (74%), Gaps = 7/106 (6%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +TLG TL ++LDE++ G +TPT+AMKVL QFDK +NGAL S +K++L+FK G
Sbjct: 4 YELYRRSTLGMTLTDALDEMVTTGELTPTIAMKVLAQFDKFMNGALKS-LKTKLSFK-GD 61
Query: 63 LNTYRFCDNVWTFVLTDVEFREVA-----EIARVNKLKIVACDGKS 103
L TYRFCDNVWTF+L +V F A V++LKIVACDGK+
Sbjct: 62 LETYRFCDNVWTFMLKNVTFDVSGPGGDKRAASVDRLKIVACDGKA 107
>gi|333449428|gb|AEF33400.1| transcription initiation factor IIA subunit 2 protein, partial
[Crassostrea ariakensis]
Length = 101
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 69/79 (87%), Gaps = 1/79 (1%)
Query: 26 GTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLTDVEFREV 85
G ITP LA+KVLLQFDK+IN AL ++VK+R+ K GKLNTYRFCDNVWTFVL +V+FR+V
Sbjct: 20 GQITPQLALKVLLQFDKAINTALANRVKNRIQLK-GKLNTYRFCDNVWTFVLNNVDFRDV 78
Query: 86 AEIARVNKLKIVACDGKSS 104
E+A+ +K+KIVACDGKS+
Sbjct: 79 QELAKCDKVKIVACDGKSA 97
>gi|55585039|gb|AAV53715.1| transcription factor IIA gamma subunit [Oryza sativa Indica Group]
Length = 106
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++ GT++P LA++VL QFDKS+ AL ++VKS+++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLEQFDKSMTEALENQVKSKVSIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+LT+ F+ +V K+KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILTEASFKNEETTEQVGKVKIVACDSK 102
>gi|270000376|gb|ACZ58035.1| TFIIA small subunity [Saccharum hybrid cultivar SP80-3280]
Length = 106
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVNNGTLSPELAIQVLIQFDKSMTDALENQVKSKVNIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+LT+ F+ +V K+KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILTEASFKNEETTEQVGKVKIVACDSK 102
>gi|449441772|ref|XP_004138656.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Cucumis sativus]
Length = 106
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++Q GT++P LA++VL+QFDKS+ AL S+VKS++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVIIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+L D F+ V ++KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILQDASFKNEDSNEVVGRIKIVACDSK 102
>gi|356500773|ref|XP_003519205.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Glycine max]
Length = 106
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++Q GT++P LA++VL+QFDKS+ AL ++VKS+++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+L D F+ V ++KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILQDALFKNEDSQENVGRVKIVACDSK 102
>gi|195553916|ref|XP_002076788.1| GD24638 [Drosophila simulans]
gi|194202778|gb|EDX16354.1| GD24638 [Drosophila simulans]
Length = 107
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 74/104 (71%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQ YR TTLG+TLQE+LDE+++ G IT +A VL ++DKS+ AL S +TF +
Sbjct: 1 MNYQHYRATTLGSTLQETLDEMMERGDITQEIANLVLQKYDKSVTSALKEHGTSNMTFTA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G+L T+RFCDNVWT +L D EFRE +V+ +K+VAC GK +
Sbjct: 61 GRLQTFRFCDNVWTLILKDAEFREDQHSMKVDVVKVVACLGKDN 104
>gi|115442493|ref|NP_001045526.1| Os01g0970500 [Oryza sativa Japonica Group]
gi|57899208|dbj|BAD87357.1| putative transcription factor IIA small subunit [Oryza sativa
Japonica Group]
gi|57899877|dbj|BAD87713.1| putative transcription factor IIA small subunit [Oryza sativa
Japonica Group]
gi|113535057|dbj|BAF07440.1| Os01g0970500 [Oryza sativa Japonica Group]
gi|125529275|gb|EAY77389.1| hypothetical protein OsI_05377 [Oryza sativa Indica Group]
gi|125601520|gb|EAZ41096.1| hypothetical protein OsJ_25588 [Oryza sativa Japonica Group]
Length = 109
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L ++LD+++ G ++P LA++VL+QFDKS+ AL +VKS++T K G
Sbjct: 3 TFELYRRSTIGMCLTDTLDDMVSSGALSPELAIQVLVQFDKSMTSALEHQVKSKVTVK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+LTD F+ +NK+KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILTDAIFKNEEITETINKVKIVACDSK 102
>gi|388497136|gb|AFK36634.1| unknown [Lotus japonicus]
Length = 106
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++Q GT++P LA++VL+QFDKS+ AL ++VKS+++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+L D F+ V ++KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILQDALFKNEDNQENVGRVKIVACDSK 102
>gi|17556689|ref|NP_499644.1| Protein Y111B2A.13 [Caenorhabditis elegans]
gi|20140870|sp|Q9NEX2.2|T2AG_CAEEL RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|13548465|emb|CAC35842.1| Protein Y111B2A.13 [Caenorhabditis elegans]
Length = 113
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 74/102 (72%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+YQLYRNTTLG LQ++LD+ + I +L+ K++ FDKSIN LP K K+++ F++
Sbjct: 5 NYQLYRNTTLGQALQKTLDDFVGDQMIPDSLSKKIMDSFDKSINKILPHKAKNKVNFRAD 64
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
KL YR+CDNVWTF++ ++ R+ E V++LKIVACDG++
Sbjct: 65 KLRAYRYCDNVWTFIVEQIDLRDAVEGGTVDRLKIVACDGQT 106
>gi|356552976|ref|XP_003544835.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Glycine max]
Length = 106
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++Q GT++P LA++VL+QFDKS+ AL ++VKS+++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+L D F+ V ++KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILQDALFKSEDSQEIVGRVKIVACDSK 102
>gi|357490101|ref|XP_003615338.1| Transcription initiation factor IIA subunit [Medicago truncatula]
gi|355516673|gb|AES98296.1| Transcription initiation factor IIA subunit [Medicago truncatula]
Length = 106
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L ++LD+L+Q GT++P A+K+L+QFDKS+ AL +KVKS+++ K G
Sbjct: 3 TFELYRRSTIGQCLTDTLDDLVQNGTLSPDHAIKILIQFDKSVTEALETKVKSKVSIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+L D F+ + V ++KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILQDALFKSEDKQENVGRVKIVACDSK 102
>gi|357501375|ref|XP_003620976.1| Transcription initiation factor IIA subunit [Medicago truncatula]
gi|217071430|gb|ACJ84075.1| unknown [Medicago truncatula]
gi|355495991|gb|AES77194.1| Transcription initiation factor IIA subunit [Medicago truncatula]
gi|388521381|gb|AFK48752.1| unknown [Medicago truncatula]
Length = 106
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++Q GT++P +A++VL+QFDKS+ AL ++VKS+++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVQNGTLSPEIAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+L D F+ V ++KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILQDALFKNEDNQENVGRVKIVACDSK 102
>gi|303274388|ref|XP_003056515.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462599|gb|EEH59891.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 111
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 84/110 (76%), Gaps = 9/110 (8%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +TLG TL ++LDE++ +TP++AMKVL+QFDK ++ AL ++VK++ TFK G
Sbjct: 4 YELYRRSTLGMTLTDALDEMVTNFELTPSVAMKVLVQFDKCMSEAL-NRVKAKTTFK-GN 61
Query: 63 LNTYRFCDNVWTFVLTDVEFR------EVAEIARVNKLKIVACDGKSSDD 106
L TYRFCDNVWTF+L+DV F E+A A ++KLKIVACDG+++ D
Sbjct: 62 LGTYRFCDNVWTFILSDVTFSTSGAGGEIA-TATLDKLKIVACDGRTTSD 110
>gi|327284512|ref|XP_003226981.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Anolis carolinensis]
Length = 99
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 66/77 (85%), Gaps = 1/77 (1%)
Query: 28 ITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLTDVEFREVAE 87
ITP LA++VLLQFDK+IN A +V++R+ F+ G LNTYRFCDNVWTFVL DVEFREV E
Sbjct: 18 ITPQLALQVLLQFDKAINSAFAQRVRNRVNFR-GSLNTYRFCDNVWTFVLNDVEFREVTE 76
Query: 88 IARVNKLKIVACDGKSS 104
+ +V+K+KIVACDGK++
Sbjct: 77 LVKVDKVKIVACDGKNT 93
>gi|224081907|ref|XP_002306523.1| predicted protein [Populus trichocarpa]
gi|222855972|gb|EEE93519.1| predicted protein [Populus trichocarpa]
Length = 106
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LD+++Q GT++P LA +VL+QFDKS+ AL +KVKS+++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDDMVQNGTLSPELAFQVLVQFDKSMTEALETKVKSKVSIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+L D F+ V ++KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILQDAMFKNEDTQENVGRVKIVACDSK 102
>gi|165874602|gb|ABY68181.1| transcription factor IIA gamma subunit [Oryza officinalis]
gi|165874606|gb|ABY68183.1| transcription factor IIA gamma subunit [Oryza brachyantha]
gi|165874608|gb|ABY68184.1| transcription factor IIA gamma subunit [Oryza granulata]
gi|165874610|gb|ABY68185.1| transcription factor IIA gamma subunit [Leersia tisserantii]
Length = 99
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS+++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVAC 99
L+TYRFCDNVWTF+LT+ +F+ +V K+KIVAC
Sbjct: 62 HLHTYRFCDNVWTFILTEAQFKNEETTEQVGKVKIVAC 99
>gi|195347518|ref|XP_002040299.1| GM19003 [Drosophila sechellia]
gi|194121727|gb|EDW43770.1| GM19003 [Drosophila sechellia]
Length = 107
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 74/104 (71%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQ YR TTLG+TLQE+LDE+++ G IT + VL ++DKS+ AL S +TF +
Sbjct: 1 MNYQHYRATTLGSTLQETLDEMMERGDITQEIVNLVLQKYDKSVTSALKEHGTSNMTFTA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G+L+T+RFCDNVWT +L D EFRE +V+ +K+VAC GK +
Sbjct: 61 GRLHTFRFCDNVWTLILKDAEFREDQHSMKVDVVKVVACLGKDN 104
>gi|281205083|gb|EFA79276.1| transcription initiation factor IIA gamma chain [Polysphondylium
pallidum PN500]
Length = 131
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+G L ++LDEL+ I+ L KVLLQFDKSIN AL VKS+ +FK G
Sbjct: 22 YELYRRSTIGEALTDTLDELVTNQYISQQLYDKVLLQFDKSINEALADTVKSKASFK-GD 80
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSDDR 107
L+TYRFCDNVWTF+L + EF+ E +V+ +KIVACD S+++
Sbjct: 81 LHTYRFCDNVWTFILENAEFKTENETIKVDNVKIVACDANISNEK 125
>gi|165874604|gb|ABY68182.1| transcription factor IIA gamma subunit [Oryza australiensis]
Length = 99
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS+++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVAC 99
L+TYRFCDNVWTF+LT+ +F+ +V K+KIVAC
Sbjct: 62 HLHTYRFCDNVWTFILTEAQFKNEDTTEQVGKVKIVAC 99
>gi|242055747|ref|XP_002457019.1| hypothetical protein SORBIDRAFT_03g047230 [Sorghum bicolor]
gi|241928994|gb|EES02139.1| hypothetical protein SORBIDRAFT_03g047230 [Sorghum bicolor]
Length = 109
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDEL+ G ++P LA++VL+QFDKS+ AL +VKS++ K G
Sbjct: 3 TFELYRRSTIGTCLTETLDELVSSGAVSPELAIQVLVQFDKSMTEALEMQVKSKVNVK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+LTD F+ + K+KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILTDATFKSEEIQETLGKVKIVACDSK 102
>gi|429238584|ref|NP_587763.2| transcription factor TFIIA complex small subunit (predicted)
[Schizosaccharomyces pombe 972h-]
gi|395398472|sp|O74948.2|T2AG_SCHPO RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
small chain
gi|347834421|emb|CAA19263.2| transcription factor TFIIA complex small subunit (predicted)
[Schizosaccharomyces pombe]
Length = 109
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G +L ++LD+LI G I+P LAMKVL FDKS+ AL KV+SRLTFK G
Sbjct: 5 YELYRRSSIGISLTDALDDLISQGKISPQLAMKVLFNFDKSMTEALAEKVRSRLTFK-GH 63
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
L+TYRFCD VWTF++ + FR E NK++IVAC + S
Sbjct: 64 LDTYRFCDEVWTFIIKNPSFRFDNETVTSNKIRIVACATRDS 105
>gi|165874600|gb|ABY68180.1| transcription factor IIA gamma subunit [Oryza punctata]
Length = 99
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS+++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVAC 99
L+TYRFCDNVWTF+LT+ +F+ V K+KIVAC
Sbjct: 62 HLHTYRFCDNVWTFILTEAQFKNEDTTESVGKVKIVAC 99
>gi|268571417|ref|XP_002641038.1| Hypothetical protein CBG20129 [Caenorhabditis briggsae]
Length = 114
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+YQLYRNTTLG LQ++LD+ + I L+ KV+ FDKSIN LP K ++++ F++
Sbjct: 5 NYQLYRNTTLGEALQKTLDDFVSEQLIPENLSKKVMDSFDKSINRILPIKARNKVNFRAD 64
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEI-ARVNKLKIVACDGKS 103
KL YR+CDNVWTF++ V+ +E E A VN+LKIVACDG++
Sbjct: 65 KLRAYRYCDNVWTFIVEQVDLKEAIEPNAPVNRLKIVACDGQT 107
>gi|358335180|dbj|GAA53680.1| transcription initiation factor TFIIA small subunit [Clonorchis
sinensis]
Length = 160
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 80/117 (68%), Gaps = 16/117 (13%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKV---------------LLQFDKSINGA 47
+Q+YR TTLGNTLQE+LDE++++ + A+KV + +FD+ I+ A
Sbjct: 4 HQMYRRTTLGNTLQEALDEMVEHKLLQQKTALKVNATRNDEAYFPCLQVIQKFDQCISLA 63
Query: 48 LPSKVKSRLTFKSGKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
L +VK+RL+ K G LNTYRFCDNVWT V+ DVE ++ + I V+K+KIVAC+GKS+
Sbjct: 64 LAKRVKNRLSLK-GHLNTYRFCDNVWTLVMNDVEIKDSSAIMTVDKIKIVACEGKSA 119
>gi|302792214|ref|XP_002977873.1| hypothetical protein SELMODRAFT_233015 [Selaginella moellendorffii]
gi|300154576|gb|EFJ21211.1| hypothetical protein SELMODRAFT_233015 [Selaginella moellendorffii]
Length = 108
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
S +LYR +T+G L ++LDE++ G+I P LA++VL+QFDKS+ AL SKV+++ TFK G
Sbjct: 3 SLELYRKSTIGIGLTDALDEMVTNGSIPPLLAVRVLMQFDKSMGEALQSKVRAKTTFK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L TYRFCDN+W F+L + F+ E+ V+++KIVACD K
Sbjct: 62 HLRTYRFCDNIWIFLLENATFKTDNEVQHVDRVKIVACDAK 102
>gi|198452236|ref|XP_002137443.1| GA26545 [Drosophila pseudoobscura pseudoobscura]
gi|198131845|gb|EDY68001.1| GA26545 [Drosophila pseudoobscura pseudoobscura]
Length = 129
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYR++T+G TLQ++LDEL++ G ++P LA KVL Q+D SIN A VK+ LTF
Sbjct: 1 MAYQLYRSSTVGITLQDTLDELVKNGQMSPFLAGKVLQQYDVSINEAFKENVKTCLTFTG 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAE-IARVNKLKIVACD 100
+L++Y+FCDNVWT L DVEF IA+V+K+KIVAC+
Sbjct: 61 SRLSSYQFCDNVWTLRLKDVEFCSKNHVIAKVDKVKIVACE 101
>gi|312073160|ref|XP_003139395.1| hypothetical protein LOAG_03809 [Loa loa]
Length = 525
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 74/100 (74%), Gaps = 2/100 (2%)
Query: 7 RNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTY 66
R+TTLG L+ +LDE ++ GTITP+LA VL FDK IN AL +VK+++ FK+ KL Y
Sbjct: 421 RSTTLGIALRSTLDEFVEDGTITPSLAQTVLTTFDKCINRALSQRVKNKVNFKADKLKAY 480
Query: 67 RFCDNVWTFVLTDVEFREVAEIAR--VNKLKIVACDGKSS 104
RFCDNVWTFV+ +VEFR+V + V+++KIVACD ++
Sbjct: 481 RFCDNVWTFVMENVEFRDVTQPVDGIVDRVKIVACDASAA 520
>gi|308465662|ref|XP_003095089.1| hypothetical protein CRE_20924 [Caenorhabditis remanei]
gi|308246135|gb|EFO90087.1| hypothetical protein CRE_20924 [Caenorhabditis remanei]
Length = 117
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+YQLYRNTTLG LQ++LD+ + I +L+ KV+ FDKSIN LP K K+++ F++
Sbjct: 5 NYQLYRNTTLGQALQKTLDDFVSEQIIPDSLSKKVMDSFDKSINRILPMKAKNKVNFRAE 64
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEI-ARVNKLKIVACDGKS 103
KL YR+CDNVWTF++ V+ +E + VN+LKIVACDG++
Sbjct: 65 KLRAYRYCDNVWTFIVEQVDLKEAIDPNGPVNRLKIVACDGQT 107
>gi|85112999|ref|XP_964450.1| hypothetical protein NCU09748 [Neurospora crassa OR74A]
gi|28926232|gb|EAA35214.1| predicted protein [Neurospora crassa OR74A]
gi|336470824|gb|EGO58985.1| hypothetical protein NEUTE1DRAFT_116338 [Neurospora tetrasperma
FGSC 2508]
gi|350291891|gb|EGZ73086.1| transcription initiation factor IIA, gamma subunit [Neurospora
tetrasperma FGSC 2509]
Length = 115
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 76/107 (71%), Gaps = 3/107 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y LYR+ +LG+TL ++LD+LI I P LAMKVL+QFD+ I AL KVK+RLTFK G
Sbjct: 10 YDLYRHGSLGSTLTDALDDLIGAERIDPQLAMKVLMQFDRVITEALSEKVKARLTFK-GS 68
Query: 63 LNTYRFCDNVWTFVLTDVEFREVA--EIARVNKLKIVACDGKSSDDR 107
L+TYRFCD VWTF++ +V F+ + +K+KIV+C K SD++
Sbjct: 69 LDTYRFCDEVWTFLIKNVTFKMDGGQSVVTADKVKIVSCSAKRSDEK 115
>gi|336263617|ref|XP_003346588.1| hypothetical protein SMAC_04761 [Sordaria macrospora k-hell]
gi|380090483|emb|CCC11779.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 115
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 76/107 (71%), Gaps = 3/107 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y LYR+ +LG+TL ++LD+LI + P LAMKVL+QFD+ I AL KVK+RLTFK G
Sbjct: 10 YDLYRHGSLGSTLTDALDDLIGAERMDPQLAMKVLMQFDRVITEALNEKVKARLTFK-GS 68
Query: 63 LNTYRFCDNVWTFVLTDVEFREVA--EIARVNKLKIVACDGKSSDDR 107
L+TYRFCD VWTF++ +V F+ + +K+KIV+C K SD++
Sbjct: 69 LDTYRFCDEVWTFLIKNVTFKMDGGQSVVTADKVKIVSCSAKRSDEK 115
>gi|384486650|gb|EIE78830.1| hypothetical protein RO3G_03535 [Rhizopus delemar RA 99-880]
gi|384497972|gb|EIE88463.1| hypothetical protein RO3G_13174 [Rhizopus delemar RA 99-880]
Length = 110
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L +SLDELIQ G I P LAM+VL+ FD+SI+ AL VK++ T K G
Sbjct: 7 YELYRRSSIGMALTDSLDELIQSGHINPQLAMRVLMTFDRSISEALSQIVKNKATIK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ + F+ E+ +K+KIVAC+ K
Sbjct: 66 LHTYRFCDEVWTFIVENPNFKFDQELVSADKVKIVACNVK 105
>gi|106879581|emb|CAJ38374.1| transcription initiation factor [Plantago major]
Length = 114
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LD+++ G ++P LA++VL+QFDKS+ AL S+VKS+++ K G
Sbjct: 11 TFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSMTEALESEVKSKVSIK-G 69
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF++ + + + V +KIVACD K
Sbjct: 70 HLHTYRFCDNVWTFIVQNAQLKSEEGQETVETVKIVACDSK 110
>gi|449295948|gb|EMC91969.1| hypothetical protein BAUCODRAFT_39124 [Baudoinia compniacensis UAMH
10762]
Length = 112
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR T++G L ++LD+LI I P LAM ++ QFDKSI L KVK+RL FK G
Sbjct: 9 YELYRGTSIGMALADTLDDLISTRRIEPQLAMHIMAQFDKSIANVLGEKVKARLNFK-GH 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ DV F+ + + R ++KIVAC K
Sbjct: 68 LDTYRFCDEVWTFIIKDVNFKMDNSSTERAERVKIVACQSK 108
>gi|116784069|gb|ABK23201.1| unknown [Picea sitchensis]
Length = 106
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDEL+ GT++P A++VL+QFDKS+ AL ++VKS++T K G
Sbjct: 3 TFELYRKSTIGTCLTETLDELVSNGTLSPEHAIQVLVQFDKSMAEALETQVKSKVTIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+L + F+ ++KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFLLQNATFKGEDIQENAVRVKIVACDSK 102
>gi|444730970|gb|ELW71339.1| Transcription initiation factor IIA subunit 2 [Tupaia chinensis]
Length = 141
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 62/102 (60%), Gaps = 36/102 (35%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQ------------------------------------ 24
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK
Sbjct: 25 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 66
>gi|24639006|ref|NP_569877.1| TfIIA-S-2 [Drosophila melanogaster]
gi|20140919|sp|Q9W5B9.1|T2AH_DROME RecName: Full=Transcription initiation factor IIA subunit 2-2;
AltName: Full=General transcription factor IIA subunit
2-2; AltName: Full=Transcription initiation factor IIA
gamma-2 chain; Short=TFIIA-gamma-2
gi|7290110|gb|AAF45575.1| TfIIA-S-2 [Drosophila melanogaster]
gi|285002274|gb|ADC32536.1| RT05689p [Drosophila melanogaster]
gi|294862340|gb|ADC32535.2| RT05676p [Drosophila melanogaster]
gi|358439616|gb|AEU10776.1| RT12102p1 [Drosophila melanogaster]
Length = 107
Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 71/101 (70%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQ YR TTLG TLQ++LDE+++ G IT +A VLL++DKSI+ AL S ++F +
Sbjct: 1 MNYQHYRATTLGRTLQDTLDEMMERGDITKKIANLVLLRYDKSISTALKDHGTSNMSFTA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDG 101
+L T+R CDNVWT +L D EFRE +V+ +KIVAC G
Sbjct: 61 ERLETFRCCDNVWTLILKDAEFREDQHSLKVDVVKIVACLG 101
>gi|66809053|ref|XP_638249.1| transcription initiation factor IIA gamma chain [Dictyostelium
discoideum AX4]
gi|74853880|sp|Q54ND1.1|T2AG_DICDI RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|60466695|gb|EAL64746.1| transcription initiation factor IIA gamma chain [Dictyostelium
discoideum AX4]
Length = 115
Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 76/104 (73%), Gaps = 2/104 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+G L ++L+EL+ I+ +L K+L QFDK+IN AL + VK++ TFK G
Sbjct: 8 YELYRKSTIGEALTDTLEELLINQYISNSLYQKILTQFDKTINEALSNTVKAKTTFK-GS 66
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGKSSD 105
L+TYRFCD+VWTF+L + +F+ E EI +V+++KIVACD D
Sbjct: 67 LHTYRFCDSVWTFILENAQFKTEANEIVKVDRVKIVACDANVQD 110
>gi|213405229|ref|XP_002173386.1| transcription initiation factor IIA gamma chain
[Schizosaccharomyces japonicus yFS275]
gi|212001433|gb|EEB07093.1| transcription initiation factor IIA gamma chain
[Schizosaccharomyces japonicus yFS275]
Length = 107
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++ +L ++LD+LI G I+P LAMKVL FDKS+ AL KVK+RLTFK G
Sbjct: 5 YELYRRSSI--SLTDALDDLISQGKISPQLAMKVLFNFDKSMTEALSEKVKARLTFK-GH 61
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVAC 99
L+TYRFCD VWTF++ + FR E NK++IVAC
Sbjct: 62 LDTYRFCDEVWTFIIKNPSFRFDNETVASNKIRIVAC 98
>gi|440639671|gb|ELR09590.1| transcription initiation factor TFIIA small subunit [Geomyces
destructans 20631-21]
Length = 109
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G TL ++LDELI I P LAMK+L FD+SI L KVK+R+TFK G
Sbjct: 9 YELYRRSSVGRTLMDTLDELIGERRIEPQLAMKILSHFDRSITEVLQDKVKARMTFK-GH 67
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ DV F+ +K+KIV+C K
Sbjct: 68 LDTYRFCDEVWTFLIKDVTFKMDNTSVHADKVKIVSCGTK 107
>gi|189205949|ref|XP_001939309.1| transcription initiation factor IIA gamma chain [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187975402|gb|EDU42028.1| transcription initiation factor IIA gamma chain [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 113
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 72/101 (71%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR ++LG +L ++LD LI I P LAMK+LL FD+++ L KVKSRLTFK G
Sbjct: 9 YELYRRSSLGGSLTDTLDNLITERRIEPQLAMKILLNFDRAVADVLSEKVKSRLTFK-GH 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD+VWTF++ D+ F+ + +++KIV+C+ K
Sbjct: 68 LDTYRFCDDVWTFIIKDINFKLDNTHTIHADRVKIVSCNAK 108
>gi|171690782|ref|XP_001910316.1| hypothetical protein [Podospora anserina S mat+]
gi|170945339|emb|CAP71451.1| unnamed protein product [Podospora anserina S mat+]
Length = 113
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 73/107 (68%), Gaps = 3/107 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y LYR+ +LG TL ++LDELI +I P LAMKVL QFD+ + L KVK RLTFK G
Sbjct: 8 YDLYRHGSLGLTLTDALDELIGDESIAPQLAMKVLTQFDRVVAETLQEKVKQRLTFK-GS 66
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARV--NKLKIVACDGKSSDDR 107
L+TYRFCD VWTF++ +V F+ V +K+KIV+C K +DD+
Sbjct: 67 LDTYRFCDEVWTFLIRNVTFKMDGNQGSVVADKVKIVSCSAKRNDDK 113
>gi|330935585|ref|XP_003305041.1| hypothetical protein PTT_17775 [Pyrenophora teres f. teres 0-1]
gi|311318231|gb|EFQ86978.1| hypothetical protein PTT_17775 [Pyrenophora teres f. teres 0-1]
Length = 113
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 72/101 (71%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR ++LG +L ++LD LI I P LAMK+LL FD+++ L KVKSRLTFK G
Sbjct: 9 YELYRRSSLGGSLTDTLDNLITERRIEPQLAMKILLNFDRAVADVLSEKVKSRLTFK-GH 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD+VWTF++ D+ F+ + +++KIV+C+ K
Sbjct: 68 LDTYRFCDDVWTFIIKDINFKLDNTHPIHADRVKIVSCNAK 108
>gi|328772652|gb|EGF82690.1| hypothetical protein BATDEDRAFT_9833 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR ++LG L ++LDELIQ G I P AMKVL QFD S AL SKVKS+ T K G
Sbjct: 5 YELYRRSSLGMALTDTLDELIQDGHIDPQTAMKVLSQFDLSFAEALHSKVKSKATIK-GH 63
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
L+ YR CD+VWTF++ + FR E NK+K+VAC ++
Sbjct: 64 LHIYRLCDDVWTFIVENPAFRFENETVTANKIKVVACKASTA 105
>gi|406867008|gb|EKD20047.1| transcription initiation factor IIA gamma chain [Marssonina brunnea
f. sp. 'multigermtubi' MB_m1]
Length = 115
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 73/106 (68%), Gaps = 3/106 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++LD+LI I P LAMK+L FD+SI L KVK+RLTFK G
Sbjct: 9 YELYRRSSIGMALTDTLDDLISDRRIEPQLAMKILANFDRSITEVLADKVKARLTFK-GH 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKIVACDGKSSDD 106
L+TYRFCD VWTF++ DV F+ ++ + +K+KIV+C+ K D
Sbjct: 68 LDTYRFCDEVWTFLIKDVTFKMENSSQTVQADKVKIVSCNSKRPGD 113
>gi|378727559|gb|EHY54018.1| transcription initiation factor TFIIA small subunit [Exophiala
dermatitidis NIH/UT8656]
Length = 111
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 72/101 (71%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L +++D+LI G I P LAMK+L FD++I L KVKSRLTFK G
Sbjct: 7 YELYRGSSIGEALIDTIDDLINDGRIEPQLAMKILSNFDRAIAETLAEKVKSRLTFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L TYRFCD+VWTF++ DV F+ + + +K+KIV+C+ K
Sbjct: 66 LETYRFCDDVWTFLVKDVRFKSDGGQEFHADKVKIVSCNSK 106
>gi|330794689|ref|XP_003285410.1| transcription initiation factor IIA gamma chain [Dictyostelium
purpureum]
gi|325084680|gb|EGC38103.1| transcription initiation factor IIA gamma chain [Dictyostelium
purpureum]
Length = 116
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++L+EL+ I+ +L K+L QFDKSIN AL + VKS+ TFK G
Sbjct: 10 YELYRRSSVGEALTDTLEELLMNQYISSSLYQKILSQFDKSINEALSNTVKSKTTFK-GN 68
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
L+TYRFCDNVWTF+L + F+ +V ++KIVACD D
Sbjct: 69 LHTYRFCDNVWTFILDNASFKTDGVEVKVKRVKIVACDANVQD 111
>gi|393237932|gb|EJD45471.1| transcription initiation factor IIA, gamma subunit [Auricularia
delicata TFB-10046 SS5]
Length = 115
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 72/107 (67%), Gaps = 2/107 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR ++LG L ++LDELI G I+P LAMKVL Q+DKS+ AL VK++ T K G
Sbjct: 7 YEFYRGSSLGVALTDALDELITAGKISPQLAMKVLQQYDKSLADALNKTVKAKTTLK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGKSSDDRK 108
L+TYR D+VWTFV+TD F+ E ++ ++KIVAC G + D K
Sbjct: 66 LHTYRHLDDVWTFVVTDASFKMEGNDMVTAPRVKIVACKGADAQDTK 112
>gi|320590491|gb|EFX02934.1| transcription initiation factor iia small chain [Grosmannia
clavigera kw1407]
Length = 111
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++LDELI+ I P LAMKVL FD++I L KVK+RL+FK G
Sbjct: 7 YELYRRSSIGYALTDTLDELIRENRIDPQLAMKVLQNFDRAIAETLQEKVKARLSFK-GS 65
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIAR--VNKLKIVACDGKSS 104
L+TYRFCD VWTF++ DV+F+ A V+K+KIV+C+ K +
Sbjct: 66 LDTYRFCDEVWTFLIRDVQFKMEGGGAPVFVDKVKIVSCNAKPA 109
>gi|389746506|gb|EIM87686.1| transcription initiation factor IIA gamma subunit [Stereum hirsutum
FP-91666 SS1]
Length = 113
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +++G L +SLDELI G ITP LAMKVL QFDKS+ + +VK++ T K G
Sbjct: 6 YEFYRGSSIGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADTMIKQVKNKTTLK-GH 64
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVAC 99
L+TYR CD+VWTF++ D F+ E E+ K+KI+AC
Sbjct: 65 LHTYRLCDDVWTFIVKDASFKMESNEMVTAPKIKIIAC 102
>gi|115388223|ref|XP_001211617.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195701|gb|EAU37401.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 111
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR ++LG +L ++LD+LI G I P LAMK+L FDK I L KV++RLTFK G
Sbjct: 7 YELYRGSSLGLSLTDTLDDLINDGRIEPQLAMKILSTFDKVITEVLAEKVRARLTFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ DV F+ + + +K+KIV+C+ K
Sbjct: 66 LDTYRFCDEVWTFLIKDVNFKLDNQTMVTADKVKIVSCNSK 106
>gi|451856469|gb|EMD69760.1| hypothetical protein COCSADRAFT_32434 [Cochliobolus sativus ND90Pr]
gi|452003041|gb|EMD95498.1| hypothetical protein COCHEDRAFT_1019248 [Cochliobolus
heterostrophus C5]
Length = 113
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 71/101 (70%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR ++LG +L ++LD LI I P LAMK+L FD+++ L KVK+RLTFK G
Sbjct: 9 YELYRRSSLGGSLTDTLDHLITERRIEPQLAMKILANFDRAVADVLSEKVKARLTFK-GH 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD+VWTF++ D+ F+ + +++KIV+C+ K
Sbjct: 68 LDTYRFCDDVWTFIIKDINFKLDNTHQIHADRVKIVSCNAK 108
>gi|392562446|gb|EIW55626.1| transcription initiation factor IIA gamma subunit [Trametes
versicolor FP-101664 SS1]
Length = 113
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +++G L +SLDELI G ITP LAMKVL QFDKS+ + +VK++ T K G
Sbjct: 6 YEFYRGSSIGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADTMVKQVKTKTTLK-GH 64
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVAC 99
L+TYR CD+VWTF++ + +F+ E E+ K+KIVAC
Sbjct: 65 LHTYRLCDDVWTFIVKNPQFKMESNEVVSAPKIKIVAC 102
>gi|296418041|ref|XP_002838653.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634608|emb|CAZ82844.1| unnamed protein product [Tuber melanosporum]
Length = 114
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 73/103 (70%), Gaps = 4/103 (3%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR + +G L +SLD++I G+ITP LA+KVL FD+SI L ++VK+ +FK G
Sbjct: 8 YELYRRSCIGVALMDSLDDMISKGSITPQLALKVLSNFDRSIAETLANRVKANFSFK-GH 66
Query: 63 LNTYRFCDNVWTFVLTDVEFR---EVAEIARVNKLKIVACDGK 102
L+TYRFCD+VWTF++TDV F+ + NK+KIV+C+ K
Sbjct: 67 LDTYRFCDDVWTFLVTDVTFKFPQKNKPTISTNKIKIVSCNSK 109
>gi|67523451|ref|XP_659785.1| hypothetical protein AN2181.2 [Aspergillus nidulans FGSC A4]
gi|74597622|sp|Q5BB99.1|T2AG_EMENI RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
small chain
gi|40745069|gb|EAA64225.1| hypothetical protein AN2181.2 [Aspergillus nidulans FGSC A4]
gi|259487565|tpe|CBF86336.1| TPA: transcription initiation factor iia small chain
(AFU_orthologue; AFUA_2G15680) [Aspergillus nidulans
FGSC A4]
Length = 111
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 72/101 (71%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR ++LG +L ++LD+LI G I P LAMK+L FD+ I L KV++RLTFK G
Sbjct: 7 YELYRGSSLGLSLTDTLDDLINEGRIEPQLAMKILSTFDRVITEVLADKVRTRLTFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ DV F+ + + +K+KIV+C+ K
Sbjct: 66 LDTYRFCDEVWTFLIKDVNFKLDNQQTISADKVKIVSCNSK 106
>gi|367022130|ref|XP_003660350.1| hypothetical protein MYCTH_2086212 [Myceliophthora thermophila ATCC
42464]
gi|347007617|gb|AEO55105.1| hypothetical protein MYCTH_2086212 [Myceliophthora thermophila ATCC
42464]
Length = 114
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 74/107 (69%), Gaps = 3/107 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y LYR+ +LG L ++LDELI I P LAMKVL QFD+ I L KVK+RLTFK G
Sbjct: 9 YDLYRHGSLGVALTDALDELIGDERIDPQLAMKVLTQFDRVIAETLQEKVKARLTFK-GS 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKIVACDGKSSDDR 107
L+TYRFCD VWTF++ +V F+ ++ + +K+KIV+C K ++++
Sbjct: 68 LDTYRFCDEVWTFLIRNVTFKLDNGSQTVQADKVKIVSCSSKKTEEK 114
>gi|367045250|ref|XP_003653005.1| hypothetical protein THITE_2170357 [Thielavia terrestris NRRL 8126]
gi|347000267|gb|AEO66669.1| hypothetical protein THITE_2170357 [Thielavia terrestris NRRL 8126]
Length = 114
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 75/107 (70%), Gaps = 3/107 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y LYR+ +LG +L ++LDELI I P LAMKVL QFD+ I L KVK+RLTFK G
Sbjct: 9 YDLYRHGSLGVSLTDALDELIGDERIDPQLAMKVLTQFDRIIAETLQEKVKARLTFK-GS 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKIVACDGKSSDDR 107
L+TYRFCD VWTF++ +V F+ ++ + +K+KIV+C K ++++
Sbjct: 68 LDTYRFCDEVWTFLIRNVTFKLDNGSQTVQADKVKIVSCSAKRTEEK 114
>gi|169762810|ref|XP_001727305.1| transcription initiation factor IIA small chain [Aspergillus oryzae
RIB40]
gi|238488629|ref|XP_002375552.1| transcription initiation factor iia small chain [Aspergillus flavus
NRRL3357]
gi|83770333|dbj|BAE60466.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697940|gb|EED54280.1| transcription initiation factor iia small chain [Aspergillus flavus
NRRL3357]
gi|391866817|gb|EIT76085.1| transcription initiation factor IIA, gamma subunit [Aspergillus
oryzae 3.042]
Length = 112
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 72/101 (71%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR ++LG +L ++LD+LI G I P LAMK+L FD+ I L KV++RLTFK G
Sbjct: 8 YELYRGSSLGLSLTDTLDDLINDGRIEPQLAMKILSTFDRVITEVLADKVRARLTFK-GH 66
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ DV F+ + + +K+KIV+C+ K
Sbjct: 67 LDTYRFCDEVWTFLIKDVTFKLDNQTTVQADKVKIVSCNSK 107
>gi|169611212|ref|XP_001799024.1| hypothetical protein SNOG_08714 [Phaeosphaeria nodorum SN15]
gi|160702247|gb|EAT83882.2| hypothetical protein SNOG_08714 [Phaeosphaeria nodorum SN15]
Length = 115
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR ++LG L ++LD LI I P LAMK+L+ FDK++ L KVK+RLTFK G
Sbjct: 8 YELYRRSSLGGALTDTLDHLITERRIEPQLAMKILINFDKAVADGLADKVKTRLTFK-GH 66
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGKSS 104
L+TYRFCD+VWTF++ D+ F+ + + +++KIV+ KS+
Sbjct: 67 LDTYRFCDDVWTFIIKDINFKLDNSNQVHADRVKIVSLPNKSA 109
>gi|409047469|gb|EKM56948.1| hypothetical protein PHACADRAFT_254362 [Phanerochaete carnosa
HHB-10118-sp]
Length = 113
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +++G L +SLDELI G+ITP LAMKVL QFDKS+ + +VK++ T K G
Sbjct: 6 YEFYRGSSIGMALTDSLDELITNGSITPQLAMKVLQQFDKSLADTMVKQVKTKTTLK-GH 64
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVAC 99
L+TYR CD+VWTF++ + F+ E E+ K+KIVAC
Sbjct: 65 LHTYRLCDDVWTFIVKNASFKMESNEMVATPKIKIVAC 102
>gi|299739857|ref|XP_002910251.1| hypothetical protein CC1G_10965 [Coprinopsis cinerea okayama7#130]
gi|298403974|gb|EFI26757.1| hypothetical protein CC1G_10965 [Coprinopsis cinerea okayama7#130]
Length = 113
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +++G L +SLDELI G ITP LAMKVL QFDKS+ + +VK++ T K G
Sbjct: 6 YEFYRGSSIGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADTMVKQVKTKTTLK-GH 64
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVAC 99
L+TYR CD+VWTF++ + F+ E EI ++KI+AC
Sbjct: 65 LHTYRLCDDVWTFIVKNASFKMESNEIVNAPRIKIIAC 102
>gi|425767434|gb|EKV06007.1| Transcription initiation factor IIA subunit 2 [Penicillium
digitatum Pd1]
gi|425769139|gb|EKV07642.1| Transcription initiation factor IIA subunit 2 [Penicillium
digitatum PHI26]
Length = 111
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 71/101 (70%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR ++LG +L ++LD+LI G I P LAMK+L FDK + L KV++RLTFK G
Sbjct: 7 YELYRGSSLGLSLTDTLDDLINEGRIEPQLAMKILGTFDKIVTEVLADKVRARLTFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ DV F+ + +K+KIV+C+ K
Sbjct: 66 LDTYRFCDEVWTFLIKDVSFKLDNQTTVSADKVKIVSCNSK 106
>gi|145251215|ref|XP_001397121.1| transcription initiation factor IIA small chain [Aspergillus niger
CBS 513.88]
gi|134082651|emb|CAK42545.1| unnamed protein product [Aspergillus niger]
gi|350636454|gb|EHA24814.1| hypothetical protein ASPNIDRAFT_48817 [Aspergillus niger ATCC 1015]
gi|358374970|dbj|GAA91558.1| transcription initiation factor iia small chain [Aspergillus
kawachii IFO 4308]
Length = 111
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 71/101 (70%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR ++LG +L ++LD+LI G I P LAMK+L FD+ I L KV++RLTFK G
Sbjct: 7 YELYRGSSLGLSLTDTLDDLINEGRIEPQLAMKILSTFDRVITEVLADKVRARLTFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ DV F+ + +K+KIV+C+ K
Sbjct: 66 LDTYRFCDEVWTFLIKDVTFKLDNQTTVSADKVKIVSCNSK 106
>gi|71002444|ref|XP_755903.1| transcription initiation factor iia small chain [Aspergillus
fumigatus Af293]
gi|66853541|gb|EAL93865.1| transcription initiation factor iia small chain [Aspergillus
fumigatus Af293]
gi|159129958|gb|EDP55072.1| transcription initiation factor iia small chain [Aspergillus
fumigatus A1163]
Length = 111
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 71/101 (70%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR ++LG +L ++LD+LI G I P LAMK+L FD+ I L KV++RLTFK G
Sbjct: 7 YELYRGSSLGLSLTDTLDDLINEGRIEPQLAMKILSTFDRVITEVLADKVRARLTFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ DV F+ + +K+KIV+C+ K
Sbjct: 66 LDTYRFCDEVWTFLIKDVTFKLDNQATVTADKVKIVSCNSK 106
>gi|190612382|gb|ACE80625.1| TFIIAgamma [Ehrharta erecta]
Length = 87
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
YR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS++T K G L+T
Sbjct: 1 YRRSTIGMCLTETLDEMVSTGTLSPELAIQVLVQFDKSMTEALENEVKSKVTIK-GHLHT 59
Query: 66 YRFCDNVWTFVLTDVEFREVAEIARVNK 93
YRFCDNVWTF+LTD +F+ +V K
Sbjct: 60 YRFCDNVWTFILTDAQFKNEETTEQVGK 87
>gi|255953137|ref|XP_002567321.1| Pc21g02570 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589032|emb|CAP95154.1| Pc21g02570 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 111
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 71/101 (70%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR ++LG +L ++LD+LI G I P LAMK+L FDK + L KV++RLTFK G
Sbjct: 7 YELYRGSSLGLSLTDTLDDLINEGRIEPQLAMKILGTFDKIVTEVLADKVRARLTFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ DV F+ + +K+KIV+C+ K
Sbjct: 66 LDTYRFCDEVWTFLIKDVSFKLDNQTTVTADKVKIVSCNSK 106
>gi|119482003|ref|XP_001261030.1| transcription initiation factor iia small chain [Neosartorya
fischeri NRRL 181]
gi|119409184|gb|EAW19133.1| transcription initiation factor iia small chain [Neosartorya
fischeri NRRL 181]
Length = 111
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 71/101 (70%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR ++LG +L ++LD+LI G I P LAMK+L FD+ I L KV++RLTFK G
Sbjct: 7 YELYRGSSLGLSLTDTLDDLINEGRIEPQLAMKILSTFDRVITEVLADKVRARLTFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ DV F+ + +K+KIV+C+ K
Sbjct: 66 LDTYRFCDEVWTFLIKDVTFKLDNQTTVTADKVKIVSCNSK 106
>gi|121716591|ref|XP_001275852.1| transcription initiation factor iia small chain [Aspergillus
clavatus NRRL 1]
gi|119404009|gb|EAW14426.1| transcription initiation factor iia small chain [Aspergillus
clavatus NRRL 1]
Length = 111
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 72/101 (71%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR ++LG +L ++LD+LI G I P LAMK+L FD+ I L KV++RLTFK G
Sbjct: 7 YELYRGSSLGLSLTDTLDDLINEGRIEPQLAMKILSTFDRIITEVLADKVRARLTFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD+VWTF++ DV F+ + +K+KIV+C+ K
Sbjct: 66 LDTYRFCDDVWTFLIKDVTFKLDNQTTITADKVKIVSCNSK 106
>gi|116195804|ref|XP_001223714.1| hypothetical protein CHGG_04500 [Chaetomium globosum CBS 148.51]
gi|88180413|gb|EAQ87881.1| hypothetical protein CHGG_04500 [Chaetomium globosum CBS 148.51]
Length = 114
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 72/107 (67%), Gaps = 3/107 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y LYR+ +LG L ++LDELI I P LAMKVL QFD+ I L KVKSRLTFK G
Sbjct: 9 YDLYRHGSLGVALTDALDELIGDERIDPQLAMKVLTQFDRVIAETLQEKVKSRLTFK-GS 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKIVACDGKSSDDR 107
L+TYRFCD VWTF++ +V F+ + +K+KIV+C K ++++
Sbjct: 68 LDTYRFCDEVWTFLIRNVTFKLDNGSHTVVADKVKIVSCSSKKTEEK 114
>gi|452838716|gb|EME40656.1| hypothetical protein DOTSEDRAFT_74262 [Dothistroma septosporum
NZE10]
Length = 114
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++LD+LI I P LAMK++ FD+ I G L KVK+R++FK G
Sbjct: 11 YELYRGSSIGLALADTLDDLISSRRIEPQLAMKIMQHFDQHIAGVLGEKVKARMSFK-GH 69
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+ YRFCD VWTFV+ DV+F+ + A ++KIVAC K
Sbjct: 70 LDVYRFCDEVWTFVIKDVKFKMDNALQLEAERVKIVACQSK 110
>gi|165874616|gb|ABY68188.1| transcription factor IIA gamma subunit [Oryza officinalis]
Length = 91
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 7 RNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTY 66
R +T+G L ++LD+++ G ++P LA++VL+QFDKS+ AL +VKS++T K G L+TY
Sbjct: 1 RRSTIGMCLTDTLDDMVSSGALSPELAIQVLVQFDKSMTSALEHQVKSKVTVK-GHLHTY 59
Query: 67 RFCDNVWTFVLTDVEFREVAEIARVNKLKIVA 98
RFCDNVWTF+LTD F+ +NK+KIVA
Sbjct: 60 RFCDNVWTFILTDATFKNEEITETINKVKIVA 91
>gi|402083634|gb|EJT78652.1| transcription initiation factor IIA gamma chain [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 116
Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++LD+LIQ + P LAMK++ FD++I L KVKSRLTF+ G
Sbjct: 10 YELYRRSSIGTALTDALDDLIQENRMDPQLAMKIVANFDRAIAETLNEKVKSRLTFR-GS 68
Query: 63 LNTYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKIVACDGK 102
L+TYRFCD+VWTF++ +V F+ + +K+KIV+C+ K
Sbjct: 69 LDTYRFCDDVWTFLIKNVSFKMDNGGQTVTADKIKIVSCNAK 110
>gi|393227790|gb|EJD35455.1| transcription initiation factor IIA, gamma subunit [Auricularia
delicata TFB-10046 SS5]
Length = 115
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 71/107 (66%), Gaps = 2/107 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +++G L ++LDELI G I+P LAMKVL Q+DKS+ L VKS+ T K G
Sbjct: 7 YEFYRGSSIGVALTDTLDELITAGKISPQLAMKVLQQYDKSLADTLNKSVKSKTTLK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGKSSDDRK 108
L+TYR D+VWTFV+TD F+ E ++ ++KIVAC G + D K
Sbjct: 66 LHTYRHLDDVWTFVVTDASFKMEGNDMVSAPRVKIVACKGNDAVDTK 112
>gi|440795175|gb|ELR16311.1| transcription initiation factor iia, gamma subunit, helical domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 123
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y LYR +TLG LQ++LD+L + I LA KVL QFDKS++ AL ++V++R TFK G
Sbjct: 12 YSLYRKSTLGICLQDALDDLQERNHIGADLAQKVLEQFDKSMSEALATRVRTRFTFK-GH 70
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYR DNVWTF+L D FR ++ V+ +KIVAC+ +
Sbjct: 71 LHTYRLVDNVWTFLLEDTTFRSDTDVVTVDLVKIVACEER 110
>gi|347838088|emb|CCD52660.1| similar to transcription initiation factor IIA gamma chain
[Botryotinia fuckeliana]
Length = 115
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 72/107 (67%), Gaps = 4/107 (3%)
Query: 3 YQLYRNTT-LGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
Y+LYR T+ +G L ++LD+LI I P LAMK+L FD+SI L KVK+RLTFK G
Sbjct: 8 YELYRRTSSIGMALTDTLDDLISERRIEPQLAMKILANFDRSITEVLADKVKARLTFK-G 66
Query: 62 KLNTYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKIVACDGKSSDD 106
L+TYRFCD VWTF++ DV F+ ++ +K+KIV+C+ K D
Sbjct: 67 HLDTYRFCDEVWTFLIKDVTFKMENSSQSVTADKVKIVSCNSKKPGD 113
>gi|190612362|gb|ACE80615.1| TFIIAgamma [Luziola fluitans]
Length = 87
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 66/84 (78%), Gaps = 3/84 (3%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
YR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL +VKS++T K G L+T
Sbjct: 1 YRRSTIGMCLTETLDEMVLSGTLSPDLAIQVLVQFDKSMTDALEHQVKSKVTVK-GHLHT 59
Query: 66 YRFCDNVWTFVLTDVEFR--EVAE 87
YRFCDNVWTF+LTD F+ E+AE
Sbjct: 60 YRFCDNVWTFILTDATFKNEEIAE 83
>gi|240274965|gb|EER38480.1| transcription initiation factor iia small chain [Ajellomyces
capsulatus H143]
gi|325094316|gb|EGC47626.1| transcription initiation factor iia small chain [Ajellomyces
capsulatus H88]
Length = 131
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G +L ++LD+LI G I P LAMK+L FD+ I L KVK+RL+FK G
Sbjct: 27 YELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLADKVKARLSFK-GH 85
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ D F+ + +K+KIV+C+ K
Sbjct: 86 LDTYRFCDEVWTFLIKDATFKLDNQTTVHADKVKIVSCNSK 126
>gi|165874618|gb|ABY68189.1| transcription factor IIA gamma subunit [Oryza australiensis]
Length = 91
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Query: 7 RNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTY 66
R +T+G L ++LD+++ GT+ P LA++VL+QFDKS+ AL +VKS++T K G L+TY
Sbjct: 1 RRSTIGTCLTDTLDDMVSSGTLCPELAIQVLVQFDKSMTSALEHQVKSKVTVK-GHLHTY 59
Query: 67 RFCDNVWTFVLTDVEFREVAEIARVNKLKIVA 98
RFCDNVWTF+L D F+ +NK+KIVA
Sbjct: 60 RFCDNVWTFILKDATFKNEEITETINKVKIVA 91
>gi|452979059|gb|EME78822.1| hypothetical protein MYCFIDRAFT_71072 [Pseudocercospora fijiensis
CIRAD86]
Length = 115
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR T++G L ++LD+LI I P LAM+++ FD+ I L KVK+R+TFK G
Sbjct: 12 YELYRGTSIGLALADTLDDLISSRRIEPQLAMRIMANFDQHIAQVLGDKVKARMTFK-GH 70
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+ YRFCD VWTFV+ DV+F+ + A +K+KIVAC K
Sbjct: 71 LDVYRFCDEVWTFVIKDVKFKMDNALQMDADKVKIVACQSK 111
>gi|358054967|dbj|GAA99034.1| hypothetical protein E5Q_05723 [Mixia osmundae IAM 14324]
Length = 585
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 53/101 (52%), Positives = 70/101 (69%), Gaps = 3/101 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR ++LG +L ++LDELIQ G I P LA+KVL +FDK+ L S +K++ T K G
Sbjct: 485 YELYRRSSLGLSLTDALDELIQSGHINPQLALKVLAKFDKAAALVLASSLKTKCTVK-GH 543
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEI-ARVNKLKIVACDG 101
L TYR CD VWTF+LTD + E +E+ V K+KIVAC G
Sbjct: 544 LKTYRLCDEVWTFILTDATLKLEGSEVMGPVGKVKIVACKG 584
>gi|165874612|gb|ABY68186.1| transcription factor IIA gamma subunit [Oryza rufipogon]
Length = 91
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 7 RNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTY 66
R +T+G L ++LD+++ G ++P LA++VL+QFDKS+ AL +VKS++T K G L+TY
Sbjct: 1 RRSTIGMCLTDTLDDMVSSGALSPELAIQVLVQFDKSMTSALEHQVKSKVTVK-GHLHTY 59
Query: 67 RFCDNVWTFVLTDVEFREVAEIARVNKLKIVA 98
RFCDNVWTF+LTD F+ +NK+KIVA
Sbjct: 60 RFCDNVWTFILTDAIFKNEEITETINKVKIVA 91
>gi|154286362|ref|XP_001543976.1| transcription initiation factor IIA gamma chain [Ajellomyces
capsulatus NAm1]
gi|261193267|ref|XP_002623039.1| transcription initiation factor IIA gamma chain [Ajellomyces
dermatitidis SLH14081]
gi|150407617|gb|EDN03158.1| transcription initiation factor IIA gamma chain [Ajellomyces
capsulatus NAm1]
gi|225558530|gb|EEH06814.1| transcription initiation factor iia small chain [Ajellomyces
capsulatus G186AR]
gi|239588644|gb|EEQ71287.1| transcription initiation factor IIA gamma chain [Ajellomyces
dermatitidis SLH14081]
gi|239614031|gb|EEQ91018.1| transcription initiation factor IIA gamma chain [Ajellomyces
dermatitidis ER-3]
gi|327353379|gb|EGE82236.1| hypothetical protein BDDG_05179 [Ajellomyces dermatitidis ATCC
18188]
Length = 111
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G +L ++LD+LI G I P LAMK+L FD+ I L KVK+RL+FK G
Sbjct: 7 YELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLADKVKARLSFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ D F+ + +K+KIV+C+ K
Sbjct: 66 LDTYRFCDEVWTFLIKDATFKLDNQTTVHADKVKIVSCNSK 106
>gi|295667541|ref|XP_002794320.1| transcription initiation factor IIA small subunit [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226286426|gb|EEH41992.1| transcription initiation factor IIA small subunit [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 111
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G +L ++LD+LI G I P LAMK+L FD+ I L KVK+RL+FK G
Sbjct: 7 YELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLAEKVKARLSFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ D F+ + +K+KIV+C+ K
Sbjct: 66 LDTYRFCDEVWTFLIKDATFKLDNQTTVHADKVKIVSCNSK 106
>gi|225680085|gb|EEH18369.1| transcription initiation factor IIA gamma chain [Paracoccidioides
brasiliensis Pb03]
gi|226291880|gb|EEH47308.1| transcription initiation factor IIA small subunit [Paracoccidioides
brasiliensis Pb18]
Length = 111
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G +L ++LD+LI G I P LAMK+L FD+ I L KVK+RL+FK G
Sbjct: 7 YELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLAEKVKARLSFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ D F+ + +K+KIV+C+ K
Sbjct: 66 LDTYRFCDEVWTFLIKDATFKLDNQTTVHADKVKIVSCNSK 106
>gi|405122013|gb|AFR96781.1| transcription initiation factor iia small chain [Cryptococcus
neoformans var. grubii H99]
Length = 124
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 74/112 (66%), Gaps = 7/112 (6%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +++G L ++LDELI G I P LAM+VL QFDKS+ L VK++ T K G
Sbjct: 8 YEFYRGSSIGTALTDALDELITQGDIPPQLAMRVLQQFDKSLTECLQKGVKNKTTIK-GH 66
Query: 63 LNTYRFCDNVWTFVLTDVEFR-----EVAEIARVNKLKIVAC-DGKSSDDRK 108
L+TYR CD+VWTFV+ D +F+ +E+ +K+KIVAC G ++D +K
Sbjct: 67 LSTYRLCDDVWTFVVKDPQFKMEGVGAGSEMVTGSKIKIVACKSGDAADGKK 118
>gi|310795275|gb|EFQ30736.1| transcription initiation factor IIA [Glomerella graminicola M1.001]
gi|380478167|emb|CCF43747.1| transcription initiation factor IIA [Colletotrichum higginsianum]
Length = 115
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 71/102 (69%), Gaps = 3/102 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L + LD+LI I P LAMK+L FD++I AL VK+RLTFK G
Sbjct: 9 YELYRRSSIGLALTDMLDDLISEERIHPQLAMKILANFDQAITEALQKSVKARLTFK-GS 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ +V+F+ +I +K+KIV+C+ K
Sbjct: 68 LSTYRFCDEVWTFLIKNVQFKLDNGGQIVTADKVKIVSCNAK 109
>gi|336375000|gb|EGO03336.1| hypothetical protein SERLA73DRAFT_174781 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387965|gb|EGO29109.1| hypothetical protein SERLADRAFT_456442 [Serpula lacrymans var.
lacrymans S7.9]
Length = 113
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +++G L +SLDELI G ITP LAMKVL QFDKS+ + +VK++ T K G
Sbjct: 6 YEFYRGSSIGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADTMIKQVKTKTTLK-GH 64
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVAC 99
L+TYR CD+VWTF++ + F+ E E+ ++KI+AC
Sbjct: 65 LHTYRLCDDVWTFIVKNPSFKMESNEMVSAPRIKIIAC 102
>gi|409076553|gb|EKM76924.1| hypothetical protein AGABI1DRAFT_115570 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426194516|gb|EKV44447.1| hypothetical protein AGABI2DRAFT_194488 [Agaricus bisporus var.
bisporus H97]
Length = 114
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +++G L +SLDELI G ITP LAMKVL QFDKS+ + +VK++ T K G
Sbjct: 6 YEFYRGSSIGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADTMVKQVKTKTTLK-GH 64
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVAC 99
L+TYR CD+VWTF++ + F+ E E ++KI+AC
Sbjct: 65 LHTYRLCDDVWTFIVKNASFKMESNEQVAAQRIKIIAC 102
>gi|355693874|gb|AER99481.1| proteinral transcription factor IIA, 2, 12kDa [Mustela putorius
furo]
Length = 67
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRF 68
G LNTYRF
Sbjct: 60 GSLNTYRF 67
>gi|242818673|ref|XP_002487164.1| transcription initiation factor iia small chain [Talaromyces
stipitatus ATCC 10500]
gi|218713629|gb|EED13053.1| transcription initiation factor iia small chain [Talaromyces
stipitatus ATCC 10500]
Length = 111
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 71/101 (70%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR ++LG +L ++LD+LI G I P LAMK+L FD+ + L V++RL+FK G
Sbjct: 7 YELYRGSSLGLSLTDTLDDLINEGRIEPQLAMKILSNFDRYVTEVLAGHVRARLSFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ DV F+ + + +K+KIV+C+ K
Sbjct: 66 LDTYRFCDEVWTFLIKDVTFKLDNQTTVQADKVKIVSCNSK 106
>gi|258573327|ref|XP_002540845.1| transcription initiation factor IIA gamma chain [Uncinocarpus
reesii 1704]
gi|237901111|gb|EEP75512.1| transcription initiation factor IIA gamma chain [Uncinocarpus
reesii 1704]
Length = 114
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS-- 60
Y+LYR +++G +L ++LD+LI G I P LAMK+L FD+ I L KVK++L+FK+
Sbjct: 7 YELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLADKVKAKLSFKASL 66
Query: 61 GKLNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
G L+TYRFCD VWTF++ D F+ + +K+KIV+C+ K
Sbjct: 67 GHLDTYRFCDEVWTFLIKDATFKLDNQTTVHADKIKIVSCNSK 109
>gi|190612370|gb|ACE80619.1| TFIIAgamma [Leersia perrieri]
gi|190612374|gb|ACE80621.1| TFIIAgamma [Potamophila parviflora]
gi|190612380|gb|ACE80624.1| TFIIAgamma [Luziola fluitans]
Length = 87
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
YR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS+++ K G L+T
Sbjct: 1 YRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK-GHLHT 59
Query: 66 YRFCDNVWTFVLTDVEFREVAEIARVNK 93
YRFCDNVWTF+LT+ +F+ +V K
Sbjct: 60 YRFCDNVWTFILTEAQFKNEETTEQVGK 87
>gi|346970251|gb|EGY13703.1| transcription initiation factor IIA gamma chain [Verticillium
dahliae VdLs.17]
Length = 115
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 71/102 (69%), Gaps = 3/102 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L + LD+LI I P LAMK+L FD++I AL VK+RLTFK G
Sbjct: 9 YELYRRSSIGLALMDMLDDLISAERIYPQLAMKILANFDQAITEALQKNVKARLTFK-GS 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ +V+F+ ++ +K+KIV+C+ K
Sbjct: 68 LSTYRFCDEVWTFLIKNVQFKLDNGGQMVSADKVKIVSCNAK 109
>gi|393219983|gb|EJD05469.1| transcription initiation factor IIA, gamma subunit [Fomitiporia
mediterranea MF3/22]
Length = 115
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 69/100 (69%), Gaps = 4/100 (4%)
Query: 3 YQLYRNTT--LGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
Y+ YR ++ +G L +SLDELI G+ITP LAMKVL QFDKS+ L +VK++ T K
Sbjct: 6 YEFYRGSSYVIGMALTDSLDELITNGSITPQLAMKVLQQFDKSLADTLVKQVKTKTTLK- 64
Query: 61 GKLNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVAC 99
G L+TYR CD+VWTF++ D F+ E E+ K+KI+AC
Sbjct: 65 GHLHTYRLCDDVWTFIVKDPSFKMESNEMVSAQKIKIIAC 104
>gi|302422522|ref|XP_003009091.1| transcription initiation factor IIA gamma chain [Verticillium
albo-atrum VaMs.102]
gi|261352237|gb|EEY14665.1| transcription initiation factor IIA gamma chain [Verticillium
albo-atrum VaMs.102]
Length = 115
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 71/102 (69%), Gaps = 3/102 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L + LD+LI I P LAMK+L FD++I AL VK+RLTFK G
Sbjct: 9 YELYRRSSIGLALMDMLDDLISAERIYPQLAMKILANFDQAITEALQKNVKARLTFK-GS 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ +V+F+ ++ +K+KIV+C+ K
Sbjct: 68 LSTYRFCDEVWTFLIKNVQFKLDNGGQLVSADKVKIVSCNAK 109
>gi|165874614|gb|ABY68187.1| transcription factor IIA gamma subunit [Oryza punctata]
Length = 91
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 7 RNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTY 66
R +T+G L ++LD+++ G ++P LA++VL+QFDKS+ AL +VKS++T K G L+TY
Sbjct: 1 RRSTIGMCLTDTLDDMVSSGALSPELAIQVLVQFDKSMTSALEHQVKSKVTVK-GHLHTY 59
Query: 67 RFCDNVWTFVLTDVEFREVAEIARVNKLKIVA 98
RFCDNVWTF+LTD F+ +NK+KIVA
Sbjct: 60 RFCDNVWTFILTDPIFKNEEITETINKVKIVA 91
>gi|395331388|gb|EJF63769.1| transcription initiation factor IIA gamma subunit [Dichomitus
squalens LYAD-421 SS1]
Length = 113
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +++G L +SLDELI G ITP LAMKVL QFDKS+ + +VK++ T K G
Sbjct: 6 YEFYRGSSIGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADIMVKQVKTKTTLK-GH 64
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVAC 99
L+TYR CD+VWTF++ + F+ E E K+KIVAC
Sbjct: 65 LHTYRLCDDVWTFIVKNPTFKMESNEQVSAPKIKIVAC 102
>gi|164662421|ref|XP_001732332.1| hypothetical protein MGL_0107 [Malassezia globosa CBS 7966]
gi|159106235|gb|EDP45118.1| hypothetical protein MGL_0107 [Malassezia globosa CBS 7966]
Length = 113
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +++G L ++LDELIQ G I P LAMKVL QFDKSI+ L + VKS+ K G
Sbjct: 9 YEFYRQSSIGIQLTDALDELIQSGHINPILAMKVLEQFDKSISETLANNVKSKGNVK-GH 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVAC 99
L+ YR CD VWTF++ + F+ + E+ V+K KIVAC
Sbjct: 68 LHNYRLCDEVWTFIIKNAAFKLDNGEMLSVDKAKIVAC 105
>gi|165874620|gb|ABY68190.1| transcription factor IIA gamma subunit [Oryza brachyantha]
Length = 91
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Query: 7 RNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTY 66
R +T+G L ++LD+++ G ++P LA++VL+QFDKS+ AL +VKS++T K G L+TY
Sbjct: 1 RRSTIGMCLTDTLDDMVSSGALSPELAIQVLVQFDKSMTSALEHQVKSKVTVK-GHLHTY 59
Query: 67 RFCDNVWTFVLTDVEFREVAEIARVNKLKIVA 98
RFCDNVWTF+L D F+ +NK+KIVA
Sbjct: 60 RFCDNVWTFILRDATFKNEEMTETINKVKIVA 91
>gi|190612372|gb|ACE80620.1| TFIIAgamma [Chikusichloa aquatica]
Length = 87
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
YR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS+++ K G L+T
Sbjct: 1 YRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK-GHLHT 59
Query: 66 YRFCDNVWTFVLTDVEFREVAEIARVNK 93
YRFCDNVWTF+LT+ +F+ +V K
Sbjct: 60 YRFCDNVWTFILTEAQFKNEENTDQVGK 87
>gi|145343702|ref|XP_001416452.1| Transcription initiation factor IIA gamma chain, probable
[Ostreococcus lucimarinus CCE9901]
gi|144576677|gb|ABO94745.1| Transcription initiation factor IIA gamma chain, probable
[Ostreococcus lucimarinus CCE9901]
Length = 113
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 76/115 (66%), Gaps = 17/115 (14%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGAL-PSKVKSRLTFK 59
MS +LYR ++LG L ++LDEL+ G ++PT+AMKVL +FDKS+ +L SKVK+ +
Sbjct: 1 MSLELYRRSSLGMALTDALDELVISGVLSPTIAMKVLSEFDKSVCRSLRASKVKASV--- 57
Query: 60 SGKLNTYRFCDNVWTFVL---------TDVEFREVAEIARVNKLKIVACDGKSSD 105
G+L+TYRFC NVWTF++ DV+ +EV RV LK+VACD K D
Sbjct: 58 KGQLHTYRFCGNVWTFIVENAIVNIADVDVQSKEV----RVQLLKVVACDSKLGD 108
>gi|296806849|ref|XP_002844147.1| transcription initiation factor IIA gamma chain [Arthroderma otae
CBS 113480]
gi|238845449|gb|EEQ35111.1| transcription initiation factor IIA gamma chain [Arthroderma otae
CBS 113480]
Length = 111
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G +L ++LD+LI G I P LAMK+L FD+ I L KVK +L+FK G
Sbjct: 7 YELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLADKVKCKLSFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ DV F+ + +K+KIV C+ K
Sbjct: 66 LDTYRFCDEVWTFLVKDVTFKLDDQSTLHADKVKIVGCNSK 106
>gi|1429228|emb|CAA67369.1| TFIIA [Arabidopsis thaliana]
Length = 106
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++Q GT++P LA++VL+QFDKS+ AL S+VK++++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVQSGTVSPELAIQVLVQFDKSMTEALESQVKTKVSIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+ + DNVWTF+L D F+ V+ +KIVA D K
Sbjct: 62 HLHHLQVRDNVWTFILQDAMFKSYDRQENVSPVKIVASDSK 102
>gi|190612376|gb|ACE80622.1| TFIIAgamma [Rhynchoryza subulata]
Length = 87
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
YR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS+++ K G L+T
Sbjct: 1 YRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK-GHLHT 59
Query: 66 YRFCDNVWTFVLTDVEFREVAEIARVNK 93
YRFCDNVWTF+LT+ F+ +V K
Sbjct: 60 YRFCDNVWTFILTEAAFKNEETTEQVGK 87
>gi|345570876|gb|EGX53694.1| hypothetical protein AOL_s00006g22 [Arthrobotrys oligospora ATCC
24927]
Length = 111
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 72/101 (71%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++LD+LI G I P LAMK+L FD+S+ L +V ++L+FK G
Sbjct: 7 YELYRRSSIGVALTDALDDLISDGRIAPQLAMKILSNFDRSVTDILAQQVTAKLSFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ DV F+ + ++ + ++KIV+C+ K
Sbjct: 66 LDTYRFCDEVWTFLIKDVTFKLDNSQTVQSERVKIVSCNSK 106
>gi|350586731|ref|XP_003360927.2| PREDICTED: transcription initiation factor IIA subunit 2-like [Sus
scrofa]
Length = 126
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y L TTLGN+LQ +LDEL IT LA++VLLQFD++IN A KV++R+ F+ G
Sbjct: 20 YMLDIPTTLGNSLQGTLDELTPSQQITLQLALQVLLQFDEAINSAYAQKVRNRVYFR-GS 78
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
LNT RFC+NVWTFVL VEFREV E+ +V+K K VACD S
Sbjct: 79 LNTSRFCNNVWTFVLDAVEFREVTELLKVDKAKTVACDDNS 119
>gi|296418474|ref|XP_002838857.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634837|emb|CAZ83048.1| unnamed protein product [Tuber melanosporum]
Length = 115
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 68/105 (64%), Gaps = 6/105 (5%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++LD+LI G I P LAMK+L FD+ I L KVK+ LTFK G
Sbjct: 7 YELYRRSSIGTALTDALDDLISEGRIAPQLAMKILSNFDRGITEILADKVKANLTFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFREVA-----EIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ DV F+ +K+KIV+C+ K
Sbjct: 66 LDTYRFCDEVWTFLIKDVTFKFQGGQGPNSSVSADKVKIVSCNSK 110
>gi|308512819|gb|ADO33063.1| transcription initiation factor IIA gamma chain [Biston betularia]
Length = 55
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 52/55 (94%)
Query: 54 SRLTFKSGKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSDDRK 108
SRLTFK+GKLNTYRFCDNVWTF+L DVEFREV E+A+V+K+KIVACDGK+ DDR+
Sbjct: 1 SRLTFKAGKLNTYRFCDNVWTFMLNDVEFREVQEVAKVDKVKIVACDGKNVDDRR 55
>gi|190612354|gb|ACE80611.1| TFIIAgamma [Chikusichloa aquatica]
Length = 87
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 65/84 (77%), Gaps = 3/84 (3%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
YR +T+G L E+LD+++ G ++P LA++VL+QFDKS+ AL +VKS+++ K G L+T
Sbjct: 1 YRRSTIGMCLTETLDDMVSSGALSPELAIQVLVQFDKSMTNALEHQVKSKVSVK-GHLHT 59
Query: 66 YRFCDNVWTFVLTDVEFR--EVAE 87
YRFCDNVWTF+LTD F+ E+AE
Sbjct: 60 YRFCDNVWTFILTDATFKNEEIAE 83
>gi|190612378|gb|ACE80623.1| TFIIAgamma [Hygroryza aristata]
Length = 87
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
YR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS+++ K G L+T
Sbjct: 1 YRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK-GHLHT 59
Query: 66 YRFCDNVWTFVLTDVEFREVAEIARVNK 93
YRFCDNVWTF+LT+ F+ +V K
Sbjct: 60 YRFCDNVWTFILTEANFKNEETTEQVGK 87
>gi|119191810|ref|XP_001246511.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303313329|ref|XP_003066676.1| transcription initiation factor IIA gamma chain, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240106338|gb|EER24531.1| transcription initiation factor IIA gamma chain, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|320036397|gb|EFW18336.1| transcription initiation factor 2A gamma chain [Coccidioides
posadasii str. Silveira]
gi|392864260|gb|EAS34918.2| transcription initiation factor IIA gamma chain [Coccidioides
immitis RS]
Length = 111
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G +L ++LD+LI G I P LAMK+L FD+ I L KV+++L+FK G
Sbjct: 7 YELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLAEKVRAKLSFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ D F+ + +K+KIV+C+ K
Sbjct: 66 LDTYRFCDEVWTFLIKDATFKLDNQTTVHADKVKIVSCNSK 106
>gi|327305737|ref|XP_003237560.1| transcription initiation factor IIA gamma chain [Trichophyton
rubrum CBS 118892]
gi|326460558|gb|EGD86011.1| transcription initiation factor IIA gamma chain [Trichophyton
rubrum CBS 118892]
gi|326471422|gb|EGD95431.1| transcription initiation factor IIA gamma chain [Trichophyton
tonsurans CBS 112818]
gi|326481726|gb|EGE05736.1| transcription initiation factor IIA gamma chain [Trichophyton
equinum CBS 127.97]
Length = 111
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G +L ++LD+LI G I P LAMK+L FD+ I L KVK +L+FK G
Sbjct: 7 YELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLADKVKCKLSFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ DV F+ + K+KIV C+ K
Sbjct: 66 LDTYRFCDEVWTFLVKDVTFKLDDQSTLHAQKVKIVGCNSK 106
>gi|190612356|gb|ACE80612.1| TFIIAgamma [Potamophila parviflora]
Length = 87
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 65/84 (77%), Gaps = 3/84 (3%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
YR +T+G L E+LD+++ G ++P LA++VL+QFDKS+ AL +VKS+++ K G L+T
Sbjct: 1 YRRSTIGMCLTETLDDMVSSGALSPELAIQVLVQFDKSMTNALEHQVKSKVSVK-GHLHT 59
Query: 66 YRFCDNVWTFVLTDVEFR--EVAE 87
YRFCDNVWTF+LTD F+ E+AE
Sbjct: 60 YRFCDNVWTFILTDATFKNEEIAE 83
>gi|190612366|gb|ACE80617.1| TFIIAgamma [Phyllostachys aurea]
Length = 87
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 67/84 (79%), Gaps = 3/84 (3%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
YR +T+G L E+LD+++ GT++P LA++VL+QFDKS+ AL ++VKS+++FK G L+T
Sbjct: 1 YRRSTIGLCLTETLDDMVSSGTLSPELAIQVLVQFDKSMTDALENQVKSKVSFK-GHLHT 59
Query: 66 YRFCDNVWTFVLTDVEFR--EVAE 87
YRFCDNVWTF+L D F+ E++E
Sbjct: 60 YRFCDNVWTFILKDATFKYEEISE 83
>gi|385306001|gb|EIF49941.1| transcription initiation factor iia gamma chain [Dekkera
bruxellensis AWRI1499]
Length = 111
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 69/105 (65%), Gaps = 2/105 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +T+G +L ++LD LI I P LAMKVL FD+ + L VKS+L+FK G
Sbjct: 7 YEFYRRSTVGTSLADALDTLIVDQRIQPQLAMKVLANFDRVTSDNLRDIVKSKLSFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGKSSDD 106
L+TYRFCD+VWTFV+ DV + + V+K KIVAC+ K S D
Sbjct: 66 LHTYRFCDDVWTFVIKDVNVKFDDGHTMDVDKFKIVACNSKKSGD 110
>gi|350586727|ref|XP_003482259.1| PREDICTED: transcription initiation factor IIA subunit 2-like,
partial [Sus scrofa]
Length = 101
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Query: 9 TTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRF 68
TTLGN+LQ +LDEL IT LA++VLLQFD++IN A KV++R+ F+ G LNT RF
Sbjct: 1 TTLGNSLQGTLDELTPSQQITLQLALQVLLQFDEAINSAYAQKVRNRVYFR-GSLNTSRF 59
Query: 69 CDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
C+NVWTFVL VEFREV E+ +V+K K VACD S
Sbjct: 60 CNNVWTFVLDAVEFREVTELLKVDKAKTVACDDNS 94
>gi|387912870|sp|C4QGM3.2|T2AG_SCHMA RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
Length = 104
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
+++YR+TTLG TL+E+LDE++ + + P + KV+ +FD+ I+ AL +VK+RL+ + G
Sbjct: 4 HEMYRSTTLGTTLREALDEMLAHNLLQPGMDHKVMQKFDQCISNALAKRVKNRLSLR-GH 62
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKI 96
LNTYR CDNVWT V+ DVE ++ + I V+K+ +
Sbjct: 63 LNTYRNCDNVWTLVMNDVEIKDSSAIMTVDKVSL 96
>gi|190612368|gb|ACE80618.1| TFIIAgamma [Phyllostachys aurea]
Length = 87
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 67/84 (79%), Gaps = 3/84 (3%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
YR +T+G L E+LD+++ GT++P LA++VL+QFDKS+ AL ++VKS+++ K G L+T
Sbjct: 1 YRRSTIGLCLTETLDDMVSSGTLSPELAIQVLVQFDKSMTDALENQVKSKVSVK-GHLHT 59
Query: 66 YRFCDNVWTFVLTDVEFR--EVAE 87
YRFCDNVWTF+LTD F+ E++E
Sbjct: 60 YRFCDNVWTFILTDAPFKNEEISE 83
>gi|190612384|gb|ACE80626.1| TFIIAgamma [Cyperus rotundus]
Length = 87
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
YR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS+++ K G L+T
Sbjct: 1 YRRSTIGMCLTETLDEMVSNGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK-GHLHT 59
Query: 66 YRFCDNVWTFVLTDVEFR 83
YRFCDNVWTF+L D F+
Sbjct: 60 YRFCDNVWTFILQDAAFK 77
>gi|390339399|ref|XP_001178578.2| PREDICTED: transcription initiation factor IIA subunit 2-like
[Strongylocentrotus purpuratus]
Length = 95
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 62/77 (80%), Gaps = 2/77 (2%)
Query: 28 ITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLTDVEFREVAE 87
ITP LA+ VLL+FD++IN AL +++K++++FK G LNTYRFCDNVWTFVL DV+FR +
Sbjct: 15 ITPQLALNVLLKFDRAINDALANRLKNKISFK-GHLNTYRFCDNVWTFVLNDVDFRN-GD 72
Query: 88 IARVNKLKIVACDGKSS 104
V+K+KIVA DGK S
Sbjct: 73 FVTVDKVKIVAVDGKIS 89
>gi|408393289|gb|EKJ72554.1| hypothetical protein FPSE_07191 [Fusarium pseudograminearum CS3096]
Length = 115
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 70/102 (68%), Gaps = 3/102 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++LD+LI I P LAMK+L FD++I AL VK+RL FK G
Sbjct: 9 YELYRRSSIGLALTDTLDDLISEERINPQLAMKILGNFDQAITEALQKNVKARLQFK-GS 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ +V F+ ++ NK+KIV+C+ K
Sbjct: 68 LDTYRFCDEVWTFLIKNVTFKMDSGSQSITANKVKIVSCNAK 109
>gi|190612364|gb|ACE80616.1| TFIIAgamma [Ehrharta erecta]
Length = 87
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 65/84 (77%), Gaps = 3/84 (3%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
YR +T+G L E+LD+++ G ++P LA++VL+QFDKS+ AL ++VKS++T K G L+T
Sbjct: 1 YRRSTIGMCLTETLDDMVSSGALSPELAIQVLVQFDKSMTDALENQVKSKVTVK-GHLHT 59
Query: 66 YRFCDNVWTFVLTDVEFR--EVAE 87
YRFCDNVWTF+LTD F+ E+ E
Sbjct: 60 YRFCDNVWTFILTDATFKNEEITE 83
>gi|302881887|ref|XP_003039854.1| hypothetical protein NECHADRAFT_50001 [Nectria haematococca mpVI
77-13-4]
gi|327488499|sp|C7ZPG2.1|T2AG_NECH7 RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
small chain
gi|256720721|gb|EEU34141.1| hypothetical protein NECHADRAFT_50001 [Nectria haematococca mpVI
77-13-4]
Length = 114
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 70/105 (66%), Gaps = 3/105 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++LD+LI I P LAMK+L FD++I AL VK+RL FK G
Sbjct: 9 YELYRRSSIGLALTDTLDDLISDERINPQLAMKILGNFDQAITEALQKNVKARLQFK-GS 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKIVACDGKSSD 105
L+TYRFCD VWTF++ +V F+ + NK+KIV+C+ K +
Sbjct: 68 LDTYRFCDEVWTFLIKNVTFKMDTGGQAVTANKVKIVSCNAKKPE 112
>gi|398392047|ref|XP_003849483.1| hypothetical protein MYCGRDRAFT_62604 [Zymoseptoria tritici IPO323]
gi|339469360|gb|EGP84459.1| hypothetical protein MYCGRDRAFT_62604 [Zymoseptoria tritici IPO323]
Length = 114
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 68/103 (66%), Gaps = 3/103 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR T++G L ++LD+LI I P LAM+++ FD+ I L KVK+R+ FK G
Sbjct: 10 YELYRGTSIGLALADTLDDLISSRRIEPQLAMRIMANFDQHIASVLGEKVKARMNFK-GH 68
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVN--KLKIVACDGKS 103
L+ YRFCD VWTFV+ DV+F+ +++ K+KIVAC K
Sbjct: 69 LDVYRFCDEVWTFVIKDVKFKMDNNTQQLDAEKVKIVACQTKE 111
>gi|331227790|ref|XP_003326563.1| transcription initiation factor TFIIA small subunit [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
gi|309305553|gb|EFP82144.1| transcription initiation factor TFIIA small subunit [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
Length = 122
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 68/101 (67%), Gaps = 3/101 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
++LYR ++LG L ++LDELIQ G I P LA+ VL QFDKS + L ++++S+ T K G
Sbjct: 13 FELYRRSSLGLALTDALDELIQSGHINPQLALTVLKQFDKSASQVLSTQLRSKCTVK-GH 71
Query: 63 LNTYRFCDNVWTFVLTDVEFREVA--EIARVNKLKIVACDG 101
L+TYR CD VWTF+L D F+ + V ++KIVAC G
Sbjct: 72 LSTYRLCDEVWTFLLHDSTFKLEGGDSVGPVKRVKIVACKG 112
>gi|190612360|gb|ACE80614.1| TFIIAgamma [Hygroryza aristata]
Length = 87
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 64/84 (76%), Gaps = 3/84 (3%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
YR +T+G L E+LD+++ G ++P LA++VL+QFDKS+ AL +VKS+++ K G L+T
Sbjct: 1 YRRSTIGMCLTETLDDMVSSGALSPELAIQVLVQFDKSMTNALEHQVKSKVSVK-GHLHT 59
Query: 66 YRFCDNVWTFVLTDVEFR--EVAE 87
YRFCDNVWTF+LTD F+ E+ E
Sbjct: 60 YRFCDNVWTFILTDATFKNEEITE 83
>gi|392588001|gb|EIW77334.1| transcription initiation factor IIA gamma subunit [Coniophora
puteana RWD-64-598 SS2]
Length = 113
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +++G L +SLDELI G ITP LAMKVL QFDKS+ + +VK++ + K G
Sbjct: 6 YEFYRGSSIGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADTMVKQVKTKTSLK-GH 64
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVAC 99
L TYR CD+VWTF++ + F+ E E ++KI+AC
Sbjct: 65 LRTYRLCDDVWTFIIKNPTFKMEGNEQVTAERIKIIAC 102
>gi|7494874|pir||T15332 hypothetical protein B0336.5 - Caenorhabditis elegans
Length = 334
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 70/105 (66%), Gaps = 2/105 (1%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
SY LYR TTLG L ++L+++ G +T +LA KVL QFDKS+N + K ++ F +
Sbjct: 198 SYALYRGTTLGQALDKTLEDMESEGLLTKSLASKVLQQFDKSMNKQISRLPKEKMNFCAT 257
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEI--ARVNKLKIVACDGKSS 104
+L TYR+CDNVWTF+L +V ++ ++KLK+VACDG+ +
Sbjct: 258 QLLTYRYCDNVWTFILNNVTLKDPQRSFDEPIDKLKVVACDGRQT 302
>gi|165874624|gb|ABY68192.1| transcription factor IIA gamma subunit [Leersia tisserantii]
Length = 91
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 7 RNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTY 66
R +T+G L ++LD+++ G ++P LA++VL+QFDKS+ AL +VKS++T K G L+TY
Sbjct: 1 RRSTIGMCLTDTLDDMVSSGGLSPELAIQVLVQFDKSMTSALEHQVKSKVTVK-GHLHTY 59
Query: 67 RFCDNVWTFVLTDVEFREVAEIARVNKLKIVA 98
RFCDNVWTF+L D F+ + K+KIVA
Sbjct: 60 RFCDNVWTFILKDATFKNEEITETIGKVKIVA 91
>gi|430814155|emb|CCJ28569.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 392
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 14 TLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVW 73
+L ++LD+LI+ G I P LAMK+LL FDKSI L KVKSR+TF+ G L+TYRFCD VW
Sbjct: 5 SLTDALDDLIRDGQIPPQLAMKILLNFDKSITDNLTEKVKSRMTFR-GHLDTYRFCDEVW 63
Query: 74 TFVLTDVEFREVAEIARVNKLKIVACDGKS 103
TF++ + FR + +K+KIVAC+ K+
Sbjct: 64 TFIIKNPCFRLENDTMVADKIKIVACNSKT 93
>gi|256084306|ref|XP_002578371.1| transcription initiation factor iia (tfiia) gamma chain
[Schistosoma mansoni]
Length = 132
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
+++YR+TTLG TL+E+LDE++ + + P + KV+ +FD+ I+ AL +VK+RL+ + G
Sbjct: 4 HEMYRSTTLGTTLREALDEMLAHNLLQPGMDHKVMQKFDQCISNALAKRVKNRLSLR-GH 62
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLK 95
LNTYR CDNVWT V+ DVE ++ + I V+K +
Sbjct: 63 LNTYRNCDNVWTLVMNDVEIKDSSAIMTVDKAQ 95
>gi|340517640|gb|EGR47883.1| transcription initiation factor TFIIA, small subunit [Trichoderma
reesei QM6a]
Length = 115
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 70/102 (68%), Gaps = 3/102 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++LD+LI I P LAMK+L FD++I AL VKSRL FK G
Sbjct: 9 YELYRRSSIGLALTDTLDDLISEERIHPQLAMKILSNFDQAITEALQKNVKSRLQFK-GS 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ +V F+ + + +K+KIV+C+ K
Sbjct: 68 LDTYRFCDEVWTFLIKNVTFKMDNGSVSVQADKVKIVSCNAK 109
>gi|190612358|gb|ACE80613.1| TFIIAgamma [Rhynchoryza subulata]
Length = 87
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
YR +T+G L E+LD+++ G ++P LA++VL+QFDKS+ AL +VKS+++ K G L+T
Sbjct: 1 YRRSTIGMCLTETLDDMVSSGALSPELAIQVLVQFDKSMTNALEHQVKSKVSVK-GHLHT 59
Query: 66 YRFCDNVWTFVLTDVEFR 83
YRFCDNVWTF+LTD F+
Sbjct: 60 YRFCDNVWTFILTDATFK 77
>gi|183213095|gb|ACC55210.1| transcription factor IIA small subunit alpha [Xenopus borealis]
Length = 70
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 56/65 (86%), Gaps = 1/65 (1%)
Query: 40 FDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVAC 99
FDK+IN AL +V++R+ F+ G LNTYRFCDNVWTFVL DVEFREV ++ +V+K+KIVAC
Sbjct: 1 FDKAINSALAQRVRNRVNFR-GSLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVAC 59
Query: 100 DGKSS 104
DGK++
Sbjct: 60 DGKNT 64
>gi|17551834|ref|NP_498226.1| Protein B0336.13 [Caenorhabditis elegans]
gi|20141028|sp|Q9BIB4.1|YMYD_CAEEL RecName: Full=Transcription initiation factor IIA small chain
homolog
gi|351065569|emb|CCD61534.1| Protein B0336.13 [Caenorhabditis elegans]
Length = 139
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 70/105 (66%), Gaps = 2/105 (1%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
SY LYR TTLG L ++L+++ G +T +LA KVL QFDKS+N + K ++ F +
Sbjct: 3 SYALYRGTTLGQALDKTLEDMESEGLLTKSLASKVLQQFDKSMNKQISRLPKEKMNFCAT 62
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEI--ARVNKLKIVACDGKSS 104
+L TYR+CDNVWTF+L +V ++ ++KLK+VACDG+ +
Sbjct: 63 QLLTYRYCDNVWTFILNNVTLKDPQRSFDEPIDKLKVVACDGRQT 107
>gi|308799910|ref|XP_003074736.1| transcription factor IIA small subunit (ISS) [Ostreococcus tauri]
gi|116061276|emb|CAL51994.1| transcription factor IIA small subunit (ISS) [Ostreococcus tauri]
Length = 113
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 73/107 (68%), Gaps = 7/107 (6%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MS +LYR +T+G +L ++LDE++ G ++P++AMKVL +FD+ + L + K++ + K
Sbjct: 1 MSLELYRRSTIGMSLTDALDEMVNSGVLSPSIAMKVLFEFDRCVTRVLQAS-KTKASIK- 58
Query: 61 GKLNTYRFCDNVWTFVLTDV-----EFREVAEIARVNKLKIVACDGK 102
G+L+TYRFC NVWTF++ D + + +RV LK+VACDGK
Sbjct: 59 GQLHTYRFCGNVWTFIVEDAVVNVTDTDSTSRESRVKLLKVVACDGK 105
>gi|358398952|gb|EHK48303.1| hypothetical protein TRIATDRAFT_298448 [Trichoderma atroviride IMI
206040]
Length = 115
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++LD+LI I P LAMK+L FD++I AL VKSRL FK G
Sbjct: 9 YELYRRSSIGLALTDTLDDLISEERIHPQLAMKILSNFDQAITEALQKNVKSRLQFK-GS 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIA-RVNKLKIVACDGK 102
L+TYRFCD VWTF++ +V F+ + ++ + +K+KIV+C+ K
Sbjct: 68 LDTYRFCDEVWTFLIKNVTFKMDNGNVSVQADKVKIVSCNAK 109
>gi|358382624|gb|EHK20295.1| hypothetical protein TRIVIDRAFT_90125 [Trichoderma virens Gv29-8]
Length = 115
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 70/102 (68%), Gaps = 3/102 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++LD+LI I P LAMK+L FD++I AL VKSRL FK G
Sbjct: 9 YELYRRSSIGLALTDTLDDLISEERIHPQLAMKILGNFDQAITEALQKNVKSRLQFK-GS 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ +V F+ + + +K+KIV+C+ K
Sbjct: 68 LDTYRFCDEVWTFLIKNVTFKMDNGSVSVQADKVKIVSCNAK 109
>gi|389628640|ref|XP_003711973.1| transcription initiation factor IIA gamma chain [Magnaporthe oryzae
70-15]
gi|327488498|sp|A4QW40.1|T2AG_MAGO7 RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
small chain
gi|351644305|gb|EHA52166.1| transcription initiation factor IIA gamma chain [Magnaporthe oryzae
70-15]
gi|440474769|gb|ELQ43493.1| transcription initiation factor IIA gamma chain [Magnaporthe oryzae
Y34]
gi|440487364|gb|ELQ67156.1| transcription initiation factor IIA gamma chain [Magnaporthe oryzae
P131]
Length = 116
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 69/102 (67%), Gaps = 3/102 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR T+LG L ++LD+LI I P LAMK+L FD+ + L KVK+RL FK G
Sbjct: 10 YELYRRTSLGICLTDALDDLITNDRINPQLAMKILANFDRVVAETLQEKVKARLQFK-GA 68
Query: 63 LNTYRFCDNVWTFVLTDVEFREVA--EIARVNKLKIVACDGK 102
L+ YRFCD+VWTFV+ ++ F+ + + +K+KIV+C+ K
Sbjct: 69 LDNYRFCDDVWTFVIKNINFKLDGGNQTIQADKVKIVSCNAK 110
>gi|165874622|gb|ABY68191.1| transcription factor IIA gamma subunit [Oryza granulata]
Length = 91
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 7 RNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTY 66
R +T+G L ++LD+++ G ++P LA++VL+QFDKS+ AL +VKS++ K G L+TY
Sbjct: 1 RRSTIGMCLTDTLDDMVSSGALSPELAIQVLVQFDKSMTSALEHQVKSKVIVK-GHLHTY 59
Query: 67 RFCDNVWTFVLTDVEFREVAEIARVNKLKIVA 98
RFCDNVWTF+L D F+ ++K+KIVA
Sbjct: 60 RFCDNVWTFILKDATFKNEEITETISKVKIVA 91
>gi|255713582|ref|XP_002553073.1| KLTH0D08338p [Lachancea thermotolerans]
gi|238934453|emb|CAR22635.1| KLTH0D08338p [Lachancea thermotolerans CBS 6340]
Length = 115
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 73/108 (67%), Gaps = 7/108 (6%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+G TL ++LD LI G I +LAM+VL FD+ + L K +S+LTFK G
Sbjct: 7 YELYRRSTVGATLVDALDTLISDGRIEASLAMRVLDTFDRVVAETLKDKTQSKLTFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTD--VEFREVAEI----ARVNKLKIVACDGKSS 104
L+TYRFCD+VWTF++ D V+ + +I V+KL+IVAC+ K +
Sbjct: 66 LDTYRFCDDVWTFIIKDCNVKLDQTEDIQGNTVVVDKLRIVACNSKKT 113
>gi|341883902|gb|EGT39837.1| hypothetical protein CAEBREN_09207 [Caenorhabditis brenneri]
Length = 136
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
SY LYR TTLG L+++L ++ G + +L K+L QFDKS+N + K ++ F +
Sbjct: 3 SYALYRGTTLGQALEQTLSDMDDEGLLPKSLVNKILFQFDKSMNKQISRLPKEKVQFCAT 62
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEI--ARVNKLKIVACDGKSSD 105
+L TYR+CDNVWTF+L +V R+ V+KLKIVACDG+ ++
Sbjct: 63 QLVTYRYCDNVWTFILNNVTLRDSQRSFDEPVDKLKIVACDGRQTN 108
>gi|308497460|ref|XP_003110917.1| hypothetical protein CRE_04729 [Caenorhabditis remanei]
gi|308242797|gb|EFO86749.1| hypothetical protein CRE_04729 [Caenorhabditis remanei]
Length = 135
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
SY LYR TTLG L+++L+++ + G + +L KVL QFDKS+N + K ++ F +
Sbjct: 3 SYALYRGTTLGQALEQTLNDMEEEGLLPKSLVSKVLNQFDKSMNKQISRLPKEKMNFCAS 62
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEI--ARVNKLKIVACDGKSSD 105
+L TYR+CDNVWTF+L +V ++ ++KLKIVACDG+ ++
Sbjct: 63 QLLTYRYCDNVWTFILNNVTLKDPQRSFDDPIDKLKIVACDGRQTN 108
>gi|400598059|gb|EJP65779.1| transcription initiation factor IIA [Beauveria bassiana ARSEF 2860]
Length = 115
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 70/102 (68%), Gaps = 3/102 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++LD+LI I P LAMK+L FD++I AL V+SRL FK G
Sbjct: 9 YELYRRSSIGLALTDTLDDLISESRIHPQLAMKILGTFDQAITEALQKNVRSRLQFK-GS 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKIVACDGK 102
L+TYR CD VWTF++ +V F+ ++ + +K+KIV+C+ K
Sbjct: 68 LDTYRLCDEVWTFLIKNVTFKMDNGSQTVQADKVKIVSCNAK 109
>gi|328849869|gb|EGF99042.1| hypothetical protein MELLADRAFT_73472 [Melampsora larici-populina
98AG31]
Length = 122
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 70/103 (67%), Gaps = 3/103 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
++LYR +++G L ++LDELIQ G I P LA+ VL QFDKS + L ++++S+ K G
Sbjct: 14 FELYRRSSVGLALTDALDELIQSGHINPQLALTVLKQFDKSASHVLSTQLRSKCQIK-GH 72
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAE-IARVNKLKIVACDGKS 103
L+TYR CD VWTF+L D F+ E E + V ++KIVAC G +
Sbjct: 73 LSTYRLCDEVWTFLLHDSIFKLEGGEQVGPVKRVKIVACKGNA 115
>gi|58269180|ref|XP_571746.1| transcription initiation factor iia small chain [Cryptococcus
neoformans var. neoformans JEC21]
gi|134114409|ref|XP_774133.1| hypothetical protein CNBG4330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819547|sp|P0CR85.1|T2AG_CRYNB RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
small chain
gi|338819548|sp|P0CR84.1|T2AG_CRYNJ RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
small chain
gi|50256766|gb|EAL19486.1| hypothetical protein CNBG4330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227982|gb|AAW44439.1| transcription initiation factor iia small chain, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 127
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 72/112 (64%), Gaps = 7/112 (6%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ R+ +G L ++LDELI G I P LAM+VL QFDKS+ L VK++ T K G
Sbjct: 11 YRGSRHVHIGTALTDALDELITQGDIPPQLAMRVLQQFDKSLTECLQKGVKNKTTIK-GH 69
Query: 63 LNTYRFCDNVWTFVLTDVEFR-----EVAEIARVNKLKIVAC-DGKSSDDRK 108
L+TYR CD+VWTFV+ D +F+ +E+ +K+KIVAC G ++D +K
Sbjct: 70 LSTYRLCDDVWTFVVKDPQFKMEGVGAGSEMVTGSKIKIVACKSGDAADGKK 121
>gi|321261519|ref|XP_003195479.1| transcription initiation factor iia small chain [Cryptococcus
gattii WM276]
gi|317461952|gb|ADV23692.1| Transcription initiation factor iia small chain, putative
[Cryptococcus gattii WM276]
Length = 126
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 72/112 (64%), Gaps = 7/112 (6%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ R+ +G L ++LDELI G I P LAM+VL QFDKS+ L VK++ T K G
Sbjct: 11 YRGSRHVGIGTALTDALDELITQGDIPPQLAMRVLQQFDKSLTECLQKGVKNKTTIK-GH 69
Query: 63 LNTYRFCDNVWTFVLTDVEFR-----EVAEIARVNKLKIVAC-DGKSSDDRK 108
L+TYR CD+VWTFV+ D +F+ +E+ +K+KIVAC G ++D +K
Sbjct: 70 LSTYRLCDDVWTFVVKDPQFKMEGVGAGSEMVTGSKIKIVACKSGDAADGKK 121
>gi|407920278|gb|EKG13493.1| Transcription initiation factor IIA gamma subunit [Macrophomina
phaseolina MS6]
Length = 110
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 71/97 (73%), Gaps = 2/97 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y++YR T++G TL ++LDELI + P LA+K++ FDK++ + KVK+RL+FK G
Sbjct: 7 YEIYRKTSIGLTLMDTLDELISTRRMEPQLAIKIMQNFDKALADVISEKVKARLSFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVA 98
L+TYRFCD+VWTF++ D+ F+ + ++ +K+KIV+
Sbjct: 66 LDTYRFCDDVWTFIIKDITFKMDNSQQLTADKIKIVS 102
>gi|118487018|gb|ABK95340.1| unknown [Populus trichocarpa]
Length = 84
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
Query: 22 LIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLTDVE 81
++Q GT++P LA +VL+QFDKS+ AL +KVKS+++ K G L+TYRFCDNVWTF+L D
Sbjct: 1 MVQNGTLSPELAFQVLVQFDKSMTEALETKVKSKVSIK-GHLHTYRFCDNVWTFILQDAM 59
Query: 82 FREVAEIARVNKLKIVACDGK 102
F+ V ++KIVACD K
Sbjct: 60 FKNEDTQENVGRVKIVACDSK 80
>gi|50305621|ref|XP_452771.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641904|emb|CAH01622.1| KLLA0C12815p [Kluyveromyces lactis]
Length = 113
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 69/104 (66%), Gaps = 5/104 (4%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +TLG +L +SLD LI G I +LAM +L FD+ I+ L K S+LTFK G
Sbjct: 7 YELYRRSTLGASLMDSLDTLISDGRIEASLAMTILETFDRVISDTLRDKTTSKLTFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTD----VEFREVAEIARVNKLKIVACDGK 102
L+TYRFCD+VWTF++ D ++ ++ + +KL IVAC+ K
Sbjct: 66 LDTYRFCDDVWTFIVKDCIVKLDGQDQESELKCDKLHIVACNAK 109
>gi|302689847|ref|XP_003034603.1| hypothetical protein SCHCODRAFT_75575 [Schizophyllum commune H4-8]
gi|300108298|gb|EFI99700.1| hypothetical protein SCHCODRAFT_75575 [Schizophyllum commune H4-8]
Length = 115
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +++G L +SLDELI G ITP LAMKVL QFDKS+ + VKS+ + G
Sbjct: 6 YEFYRGSSIGMALTDSLDELITSGEITPQLAMKVLQQFDKSLADTMVKHVKSKCNMR-GS 64
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEI--ARVNKLKIVAC 99
L TYR CD+VWTFV+ D F+ E E A K+KI++C
Sbjct: 65 LRTYRLCDDVWTFVVKDPVFKLEGGEHVGADSKKIKIISC 104
>gi|190612352|gb|ACE80610.1| TFIIAgamma [Leersia perrieri]
Length = 87
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
YR +T+G L ++LD+++ G ++P LA++VL+QFDKS+ AL +VKS++T K G L+T
Sbjct: 1 YRRSTIGMCLTDTLDDMVSSGGLSPELAIQVLVQFDKSMTSALEHQVKSKVTVK-GHLHT 59
Query: 66 YRFCDNVWTFVLTDVEFREVAEIARVNK 93
YRFCDNVWTF+L D F+ +NK
Sbjct: 60 YRFCDNVWTFILKDATFKNEEITETINK 87
>gi|170116071|ref|XP_001889228.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635869|gb|EDR00171.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 116
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 66/101 (65%), Gaps = 5/101 (4%)
Query: 3 YQLYRNTT---LGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK 59
Y+ YR ++ +G L +SLDELI G ITP LAMKVL QFDKS+ + +VK++ T K
Sbjct: 6 YEFYRGSSYVKIGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADTMVKQVKNKTTLK 65
Query: 60 SGKLNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVAC 99
G L TYR CD+VWTF++ F+ E E+ ++KI+AC
Sbjct: 66 -GHLKTYRLCDDVWTFIVKSPTFKMESNEMVSAQRIKIIAC 105
>gi|268571771|ref|XP_002641144.1| Hypothetical protein CBG08996 [Caenorhabditis briggsae]
Length = 134
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
SY LYR TTLG L ++L+++ G + +L KVL+QFDKS+N + K ++ F +
Sbjct: 3 SYALYRGTTLGQALDQTLNDMEADGLLPKSLVSKVLMQFDKSMNKQISRLPKEKMNFCAT 62
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEI--ARVNKLKIVACDGKSS 104
+L TYR+CDNVWTF+L +V ++ + KLKIVACDG+ +
Sbjct: 63 QLLTYRYCDNVWTFILNNVNLKDPQRSFDEPIEKLKIVACDGRQT 107
>gi|148700280|gb|EDL32227.1| mCG140073 [Mus musculus]
Length = 88
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTL N+LQESLDELIQ ITP +A++VLLQFDK+IN AL +V++R+ F+
Sbjct: 13 MAYQLYRNTTLRNSLQESLDELIQSQHITPQIALQVLLQFDKAINSALAQRVRNRVNFR- 71
Query: 61 GKLNTYR 67
G LNTYR
Sbjct: 72 GSLNTYR 78
>gi|390599690|gb|EIN09086.1| transcription initiation factor IIA gamma subunit [Punctularia
strigosozonata HHB-11173 SS5]
Length = 119
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +++G L ++LDELI G ITP LAMKVL QFDKS+ + +VK++ T K+
Sbjct: 6 YEFYRGSSIGMALTDALDELITSGAITPQLAMKVLNQFDKSLADTMVKQVKTKTTLKARI 65
Query: 63 -----LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVAC-DGKSSDDRK 108
L TYR CD+VWTF L + +F+ E E+ K+KIVAC +G + D K
Sbjct: 66 QTPLFLCTYRLCDDVWTFSLRNAQFKMESNEMVNTPKIKIVACKNGDAVDPGK 118
>gi|388578950|gb|EIM19281.1| transcription initiation factor iia small chain, partial [Wallemia
sebi CBS 633.66]
Length = 113
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 69/107 (64%), Gaps = 6/107 (5%)
Query: 3 YQLYRNTTL----GNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTF 58
++LYR + L G L +SLDELI G I P LAMKVL QFDKS+ AL ++VK++
Sbjct: 8 FELYRRSRLVLYVGIALTDSLDELITSGHINPELAMKVLTQFDKSMMNALSNQVKNKTQM 67
Query: 59 KSGKLNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGKSS 104
+ G L+TYR CD VWTF++ + F+ + ++ NK+KIVAC S
Sbjct: 68 R-GHLHTYRLCDEVWTFIVKNPTFKVDQGDLVNANKIKIVACRNNDS 113
>gi|344228279|gb|EGV60165.1| transcription initiation factor IIA, gamma subunit [Candida tenuis
ATCC 10573]
Length = 120
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 72/114 (63%), Gaps = 11/114 (9%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSK---VKSRLTFK 59
Y+LYR +T+G TL ++LD+LI I P LAM ++ FD+ I+ L + KS+LTFK
Sbjct: 7 YELYRRSTVGATLTDALDQLISDEKIQPQLAMTIVTNFDRVISELLKPEQNIAKSKLTFK 66
Query: 60 SGKLNTYRFCDNVWTFV-------LTDVEFREVAEIARVNKLKIVACDGKSSDD 106
G L+TYRFCD+VWTF+ LTD E+ + V+K KIVAC+ + + D
Sbjct: 67 -GDLSTYRFCDDVWTFIIKNVLIKLTDTSHSELNDEVTVDKFKIVACNSRKAGD 119
>gi|346323764|gb|EGX93362.1| transcription initiation factor iia small chain [Cordyceps
militaris CM01]
Length = 115
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++LD+LI I P LAMK+L FD++I AL V+ RL FK G
Sbjct: 9 YELYRRSSIGLALTDTLDDLISESRIHPQLAMKILGNFDQAITEALQKNVRCRLQFK-GS 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKIVACDGK 102
L+TYR CD VWTF++ +V F+ + + +K+KIV+C+ K
Sbjct: 68 LDTYRLCDEVWTFLIKNVTFKMDNGSHTVQADKVKIVSCNAK 109
>gi|402219125|gb|EJT99199.1| transcription initiation factor IIA gamma subunit [Dacryopinax sp.
DJM-731 SS1]
Length = 123
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR+ ++G L +SLDELIQ G ITP LA KVL+QFD++ L VK + + K G
Sbjct: 10 YEFYRSASIGRALMDSLDELIQDGLITPQLAFKVLMQFDRATTETLNRHVKFKTSLK-GH 68
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGKSS 104
L+TYR CD+VWTF + + F+ E E+ +K+KI+A + +
Sbjct: 69 LSTYRLCDDVWTFFVKNPSFKIEGGELVTADKVKIIAVKSEQA 111
>gi|328350624|emb|CCA37024.1| Immunoglobulin-binding protein 1 [Komagataella pastoris CBS 7435]
Length = 425
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+G TL ++LD LI I P LA+++L FD+ + + K K++++FK G
Sbjct: 7 YELYRKSTIGTTLTDALDTLILDQRIQPQLALRILSNFDRVVADTMKEKAKTKISFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVAC 99
L+TYRFCD+VWTF++ D+ + E R +K KIVAC
Sbjct: 66 LHTYRFCDDVWTFIIKDLGITLDQKETVRTDKFKIVAC 103
>gi|254566241|ref|XP_002490231.1| Transcription initiation factor IIA small subunit [Komagataella
pastoris GS115]
gi|238030027|emb|CAY67950.1| Transcription initiation factor IIA small subunit [Komagataella
pastoris GS115]
Length = 110
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+G TL ++LD LI I P LA+++L FD+ + + K K++++FK G
Sbjct: 7 YELYRKSTIGTTLTDALDTLILDQRIQPQLALRILSNFDRVVADTMKEKAKTKISFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGKS 103
L+TYRFCD+VWTF++ D+ + E R +K KIVAC +
Sbjct: 66 LHTYRFCDDVWTFIIKDLGITLDQKETVRTDKFKIVACSAAT 107
>gi|432111319|gb|ELK34601.1| Transcription initiation factor IIA subunit 2 [Myotis davidii]
Length = 97
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 52/61 (85%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+S
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRS 60
Query: 61 G 61
Sbjct: 61 S 61
>gi|322695376|gb|EFY87185.1| transcription initiation factor IIA small subunit [Metarhizium
acridum CQMa 102]
Length = 392
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/96 (47%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++LD+LI I P LAMK+L FD++I AL VKSRL FK G
Sbjct: 9 YELYRRSSIGLALTDTLDDLISEERINPQLAMKILGNFDQAITEALQKNVKSRLQFK-GS 67
Query: 63 LNTYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKI 96
L+TYRFCD VWTF++ +V F+ ++ + +K+KI
Sbjct: 68 LDTYRFCDEVWTFLIKNVTFKMDNGSQSVQADKVKI 103
>gi|342881151|gb|EGU82099.1| hypothetical protein FOXB_07377 [Fusarium oxysporum Fo5176]
Length = 123
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 70/110 (63%), Gaps = 11/110 (10%)
Query: 3 YQLYRNTTLGN--------TLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKS 54
Y+LYR ++L N L ++LD+LI I P LAMK+L FD++I AL VK+
Sbjct: 9 YELYRRSSLTNMVHCSIGLALTDTLDDLISDERINPQLAMKILSNFDQAITEALQKNVKA 68
Query: 55 RLTFKSGKLNTYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKIVACDGK 102
RL FK G L+TYRFCD VWTF++ +V F+ ++ NK+KIV+C+ K
Sbjct: 69 RLQFK-GSLDTYRFCDEVWTFLIKNVTFKMDNGSQSVTANKVKIVSCNAK 117
>gi|443896936|dbj|GAC74279.1| transcription initiation factor IIA, gamma subunit [Pseudozyma
antarctica T-34]
Length = 114
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++LDELIQ G I P LAM+VL +FDKSI L VK++ K G
Sbjct: 10 YELYRRSSIGMQLTDALDELIQSGHINPVLAMRVLNEFDKSIATNLAKNVKAKSQLK-GH 68
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVAC 99
L YR C+ VWTF + + + + AE+ V+K+KIVAC
Sbjct: 69 LKDYRLCEEVWTFRVRNATLKLDNAELLDVDKVKIVAC 106
>gi|154303585|ref|XP_001552199.1| hypothetical protein BC1G_08677 [Botryotinia fuckeliana B05.10]
gi|156049595|ref|XP_001590764.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154692903|gb|EDN92641.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 97
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 15 LQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWT 74
L ++LD+LI I P LAMK+L FD+SI L KVK+RLTFK G L+TYRFCD VWT
Sbjct: 3 LTDTLDDLISERRIEPQLAMKILANFDRSITEVLADKVKARLTFK-GHLDTYRFCDEVWT 61
Query: 75 FVLTDVEFR--EVAEIARVNKLKIVACDGKSSDD 106
F++ DV F+ ++ +K+KIV+C+ K D
Sbjct: 62 FLIKDVTFKMENSSQSVTADKVKIVSCNSKKPGD 95
>gi|302678869|ref|XP_003029117.1| hypothetical protein SCHCODRAFT_59771 [Schizophyllum commune H4-8]
gi|300102806|gb|EFI94214.1| hypothetical protein SCHCODRAFT_59771 [Schizophyllum commune H4-8]
Length = 119
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 69/110 (62%), Gaps = 10/110 (9%)
Query: 3 YQLYRNTT------LGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRL 56
Y+ YR ++ LG L +SLDELI G ITP LAMKVL QFDKS+ + + ++++
Sbjct: 6 YEFYRGSSYGHAPSLGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADTMANSLRAKA 65
Query: 57 TFKSGKLNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGKSSD 105
T K G L TYR CD+VWTFV+ + E +++ K+KI+AC KS D
Sbjct: 66 TLK-GHLKTYRLCDDVWTFVVKQPVVKLESSDLISTEKIKIIAC--KSGD 112
>gi|343424751|emb|CBQ68289.1| probable transcription initiation factor iia gamma chain
[Sporisorium reilianum SRZ2]
Length = 116
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++LDELIQ G I P LAM+VL +FDK+I L VK++ K G
Sbjct: 12 YELYRRSSIGMQLTDALDELIQSGHINPVLAMRVLNEFDKAIATNLGKNVKAKSQLK-GH 70
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVAC 99
L YR C+ VWTF + + + + AEI V+K+KIVAC
Sbjct: 71 LKDYRLCEEVWTFRVRNATLKLDNAEILDVDKVKIVAC 108
>gi|148694235|gb|EDL26182.1| mCG2938, isoform CRA_c [Mus musculus]
Length = 68
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 51/59 (86%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK 59
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR 59
>gi|403419266|emb|CCM05966.1| predicted protein [Fibroporia radiculosa]
Length = 98
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 15 LQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWT 74
L +SLDELI G ITP LAMKVL QFDKS+ + +VK++ T K G L+TYR CD+VWT
Sbjct: 3 LTDSLDELITSGAITPQLAMKVLQQFDKSLADTMVKQVKTKTTLK-GHLHTYRLCDDVWT 61
Query: 75 FVLTDVEFR-EVAEIARVNKLKIVAC 99
F++ + F+ E E+ + K+KIVAC
Sbjct: 62 FIVKNPSFKMEGNEMVQAPKIKIVAC 87
>gi|388855885|emb|CCF50460.1| probable transcription initiation factor iia gamma chain [Ustilago
hordei]
Length = 117
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L ++LDELIQ G I P LAM+VL +FDKSI L VK++ K G
Sbjct: 13 YELYRRSSIGMQLTDALDELIQSGHINPVLAMRVLNEFDKSIATNLAKNVKAKAQLK-GH 71
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVAC 99
L YR C+ VWTF + + + + +E+ V+K+KIVAC
Sbjct: 72 LKDYRLCEEVWTFRVRNATLKLDNSELLDVDKVKIVAC 109
>gi|302306622|ref|NP_983017.2| ABR071Wp [Ashbya gossypii ATCC 10895]
gi|299788605|gb|AAS50841.2| ABR071Wp [Ashbya gossypii ATCC 10895]
gi|374106220|gb|AEY95130.1| FABR071Wp [Ashbya gossypii FDAG1]
Length = 112
Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 68/107 (63%), Gaps = 8/107 (7%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+G L +SLD LI G I +LAM+VL FDK ++ L K ++LTFK G
Sbjct: 7 YELYRRSTIGVALMDSLDTLISDGRIEASLAMRVLETFDKVVSETLRDKTSAKLTFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEF---REVAEIAR----VNKLKIVACDGK 102
L+TYRFCD+VWTF++ D + + A+ A +L IVAC+ K
Sbjct: 66 LDTYRFCDDVWTFIIKDCQVNLDQPSADGAESSFTCERLHIVACNSK 112
>gi|149028860|gb|EDL84201.1| general transcription factor IIa 2, isoform CRA_e [Rattus
norvegicus]
gi|197245743|gb|AAI68727.1| Gtf2a2 protein [Rattus norvegicus]
Length = 61
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 52/60 (86%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F++
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRN 60
>gi|443915141|gb|ELU36719.1| transcription initiation factor IIA, gamma subunit
domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 128
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 65/106 (61%), Gaps = 7/106 (6%)
Query: 10 TLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK-----SGKLN 64
++G L +SLDELI G+ITP LAMKVL QFDKS+ L VK + K G L+
Sbjct: 21 SIGIALTDSLDELITSGSITPQLAMKVLAQFDKSLADTLVKHVKVKTNLKVSATAVGHLS 80
Query: 65 TYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVAC-DGKSSDDRK 108
TYR CD VWTF++ F+ E E+ K+KIVAC +G++ D K
Sbjct: 81 TYRLCDEVWTFIVRGANFKMESNEVVTAQKIKIVACKNGEAQDPGK 126
>gi|363752399|ref|XP_003646416.1| hypothetical protein Ecym_4566 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890051|gb|AET39599.1| hypothetical protein Ecym_4566 [Eremothecium cymbalariae
DBVPG#7215]
Length = 112
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 67/107 (62%), Gaps = 8/107 (7%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+G L +SLD LI G I +LA++VL FDK ++ AL K ++LTFK G
Sbjct: 7 YELYRRSTIGAALMDSLDTLISDGRIEASLAIRVLETFDKVVSEALRDKTSAKLTFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-------EVAEIARVNKLKIVACDGK 102
L+TYRFCD+VWTF++ D + + ++L IVAC+ K
Sbjct: 66 LDTYRFCDDVWTFIIKDCQVNLDQPSTDDSENNFTCDRLHIVACNSK 112
>gi|453081398|gb|EMF09447.1| transcription initiation factor iia small chain [Mycosphaerella
populorum SO2202]
Length = 103
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Query: 10 TLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFC 69
++G L ++LD+LI I P LAM+++ FD+ I L KVK+R+TFK G L+ YRFC
Sbjct: 7 SIGLALADTLDDLISSRRIEPQLAMRIMANFDQHIATVLGDKVKARMTFK-GHLDVYRFC 65
Query: 70 DNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
D VWTFV+ DV+F+ + A K+KIVAC K
Sbjct: 66 DEVWTFVIKDVKFKMDNAHQMDAEKVKIVACQSK 99
>gi|148694239|gb|EDL26186.1| mCG2938, isoform CRA_e [Mus musculus]
Length = 115
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 8/97 (8%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 2 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRV 61
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIV 97
R +W VL + R ++ +K+ +V
Sbjct: 62 ------RMSSCIWKSVL--LTLRAYVDLTHHSKIWLV 90
>gi|353234802|emb|CCA66823.1| probable TFIIA subunit [transcription initiation factor]
[Piriformospora indica DSM 11827]
Length = 125
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G L +SLD LI ITP LA++++ ++DK++ L +VK++ TFK G+
Sbjct: 5 YELYRGSSVGIALADSLDALISSNEITPQLAIRIMERYDKAVCDVLQKQVKAKATFK-GR 63
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGKSSDD 106
L+TYR CD+VW+F L + E E V KLKI+AC + D
Sbjct: 64 LHTYRNCDDVWSFYLRKCTLKMEGGEQVPVEKLKIIACKHPDAAD 108
>gi|28913741|gb|AAH48705.1| Gtf2a2 protein [Mus musculus]
gi|74143193|dbj|BAE24136.1| unnamed protein product [Mus musculus]
gi|148694234|gb|EDL26181.1| mCG2938, isoform CRA_b [Mus musculus]
Length = 114
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 51/59 (86%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK 59
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR 59
>gi|149028861|gb|EDL84202.1| general transcription factor IIa 2, isoform CRA_f [Rattus
norvegicus]
Length = 68
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 51/59 (86%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK 59
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR 59
>gi|149028854|gb|EDL84195.1| general transcription factor IIa 2, isoform CRA_a [Rattus
norvegicus]
Length = 71
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 51/59 (86%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK 59
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR 59
>gi|392578165|gb|EIW71293.1| hypothetical protein TREMEDRAFT_28361 [Tremella mesenterica DSM
1558]
Length = 140
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 13/118 (11%)
Query: 3 YQLYRNTT-----LGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLT 57
Y+ YR ++ +G L +SLDELI G++ P LAM+VL QFDKS+ + VK++ +
Sbjct: 8 YEFYRGSSFVKHFIGTALTDSLDELITQGSMPPQLAMRVLQQFDKSLTECIQKGVKTKTS 67
Query: 58 FKSGKLNTYRFCDNVWTFVLTDVEFR-------EVAEIARVNKLKIVACDGKSSDDRK 108
K G L+TYR CD+VWTFV+ F+ E K+KIVAC G + D +
Sbjct: 68 VK-GHLSTYRLCDDVWTFVVKQPVFKMDGHQGGGGGEFVTAPKIKIVACKGGDAQDGR 124
>gi|365984289|ref|XP_003668977.1| hypothetical protein NDAI_0C00730 [Naumovozyma dairenensis CBS 421]
gi|343767745|emb|CCD23734.1| hypothetical protein NDAI_0C00730 [Naumovozyma dairenensis CBS 421]
Length = 122
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 70/117 (59%), Gaps = 15/117 (12%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+GN+L ++LD LI G I +LAM+VL FDK I+ L +++LT K G
Sbjct: 7 YELYRRSTVGNSLVDALDTLISDGRIEASLAMRVLETFDKVISETLKDNTQAKLTVK-GN 65
Query: 63 LNTYRFCDNVWTFVLT--------------DVEFREVAEIARVNKLKIVACDGKSSD 105
L+TY FCD+VWTF++ D + I V+KL+IVAC+ K SD
Sbjct: 66 LDTYGFCDDVWTFIVKNCKVTVEGNSQINGDSNNSDDQNIINVDKLRIVACNSKRSD 122
>gi|410083010|ref|XP_003959083.1| hypothetical protein KAFR_0I01670 [Kazachstania africana CBS 2517]
gi|372465673|emb|CCF59948.1| hypothetical protein KAFR_0I01670 [Kazachstania africana CBS 2517]
Length = 115
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 70/110 (63%), Gaps = 8/110 (7%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+GN+L ++LD LI G I +LAM+VL FD+ + +L +S+LT K G
Sbjct: 7 YELYRRSTIGNSLVDALDTLISEGRIEASLAMRVLETFDRVVAESLRENTQSKLTVK-GN 65
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIA-------RVNKLKIVACDGKSSD 105
L+TY FCD+VWTF++ + + A V+KL+IVAC+ K +D
Sbjct: 66 LDTYGFCDDVWTFIVKNCQVTVEGSAADGNNDTIAVDKLRIVACNSKKND 115
>gi|6322792|ref|NP_012865.1| Toa2p [Saccharomyces cerevisiae S288c]
gi|418109|sp|P32774.1|T2AG_YEAST RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=TFIIA 13.5 kDa subunit; AltName:
Full=Transcription initiation factor IIA small chain;
AltName: Full=Transcription initiation factor IIA small
subunit
gi|73535264|pdb|1RM1|B Chain B, Structure Of A Yeast TfiiaTBPTATA-Box Dna Complex
gi|172895|gb|AAA19653.1| transcription factor IIA [Saccharomyces cerevisiae]
gi|433648|emb|CAA53423.1| B112 [Saccharomyces cerevisiae]
gi|486077|emb|CAA81895.1| TOA2 [Saccharomyces cerevisiae]
gi|45269671|gb|AAS56216.1| YKL058W [Saccharomyces cerevisiae]
gi|151941488|gb|EDN59851.1| transcription factor IIA subunit [Saccharomyces cerevisiae YJM789]
gi|190409771|gb|EDV13036.1| transcription initiation factor IIA small chain [Saccharomyces
cerevisiae RM11-1a]
gi|256272473|gb|EEU07454.1| Toa2p [Saccharomyces cerevisiae JAY291]
gi|259147780|emb|CAY81030.1| Toa2p [Saccharomyces cerevisiae EC1118]
gi|285813202|tpg|DAA09099.1| TPA: Toa2p [Saccharomyces cerevisiae S288c]
gi|323332781|gb|EGA74186.1| Toa2p [Saccharomyces cerevisiae AWRI796]
gi|323347785|gb|EGA82049.1| Toa2p [Saccharomyces cerevisiae Lalvin QA23]
gi|349579505|dbj|GAA24667.1| K7_Toa2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365764606|gb|EHN06128.1| Toa2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298080|gb|EIW09178.1| Toa2p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|1587559|prf||2206495H Transcription Factor IIA:SUBUNIT=small
Length = 122
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 73/117 (62%), Gaps = 15/117 (12%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+GN+L ++LD LI G I +LAM+VL FDK + L +S+LT K G
Sbjct: 7 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDNTQSKLTVK-GN 65
Query: 63 LNTYRFCDNVWTFVLTDVE------FREVAE--------IARVNKLKIVACDGKSSD 105
L+TY FCD+VWTF++ + + R+ ++ + V+KL+IVAC+ K S+
Sbjct: 66 LDTYGFCDDVWTFIVKNCQVTVEDSHRDASQNGSGDSQSVISVDKLRIVACNSKKSE 122
>gi|444322864|ref|XP_004182073.1| hypothetical protein TBLA_0H02700 [Tetrapisispora blattae CBS 6284]
gi|387515119|emb|CCH62554.1| hypothetical protein TBLA_0H02700 [Tetrapisispora blattae CBS 6284]
Length = 114
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +TLGN L ++LD LI G + +LAM+VL FD+ +L + ++RL K G
Sbjct: 7 YELYRRSTLGNCLVDALDTLISDGRMEASLAMRVLEAFDRVAAESLRDRAQARLAVK-GN 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR------EVAEIARVNKLKIVACDGKSSD 105
L+TY FCD+VWTF++ D + + + V+KL+IVAC+ K S+
Sbjct: 66 LDTYGFCDDVWTFIVKDCQVTVDNPSGDTQQTLPVDKLRIVACNAKKSE 114
>gi|50290107|ref|XP_447485.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526795|emb|CAG60422.1| unnamed protein product [Candida glabrata]
Length = 120
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 13/115 (11%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+GN+L ++LD LI G I +LAM+VL FDK ++ L +S+LT K G
Sbjct: 7 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVSETLKDNAQSKLTVK-GN 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR------------EVAEIARVNKLKIVACDGKSSD 105
L+TY FCD+VWTF++ + E V+KL+IVAC+ K SD
Sbjct: 66 LDTYGFCDDVWTFIVKKCQVTVEGPASALNPTDEPQTTLSVDKLRIVACNSKKSD 120
>gi|1633310|pdb|1YTF|D Chain D, Yeast TfiiaTBPDNA COMPLEX
gi|38492533|pdb|1NH2|D Chain D, Crystal Structure Of A Yeast TfiiaTBPDNA COMPLEX
Length = 121
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 73/117 (62%), Gaps = 15/117 (12%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+GN+L ++LD LI G I +LAM+VL FDK + L +S+LT K G
Sbjct: 6 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDNTQSKLTVK-GN 64
Query: 63 LNTYRFCDNVWTFVLTDVE------FREVAE--------IARVNKLKIVACDGKSSD 105
L+TY FCD+VWTF++ + + R+ ++ + V+KL+IVAC+ K S+
Sbjct: 65 LDTYGFCDDVWTFIVKNCQVTVEDSHRDASQNGSGDSQSVISVDKLRIVACNSKKSE 121
>gi|150951578|ref|XP_001387921.2| Transcription initiation factor IIA small chain (TFIIA 13.5 kDa
subunit) [Scheffersomyces stipitis CBS 6054]
gi|149388710|gb|EAZ63898.2| Transcription initiation factor IIA small chain (TFIIA 13.5 kDa
subunit) [Scheffersomyces stipitis CBS 6054]
Length = 119
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSK---VKSRLTFK 59
Y+LYR +T+G TL ++LD LI I P LAM++L FD+ I+ L + KSRLTFK
Sbjct: 7 YELYRRSTVGATLTDALDTLISDEKIQPQLAMRILANFDRIISENLKLENNIAKSRLTFK 66
Query: 60 SGKLNTYRFCDNVWTFV-------LTDVEFREVAEIARVNKLKIVACDGKSSDD 106
G L+TY FCD+VWTF+ ++DV +EI V+K KIVAC+ K + D
Sbjct: 67 -GVLSTYNFCDDVWTFIIKNVLIKMSDVSANVDSEIT-VDKFKIVACNSKRAGD 118
>gi|116283680|gb|AAH28551.1| Gtf2a2 protein [Mus musculus]
Length = 76
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 51/59 (86%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK 59
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR 59
>gi|328869993|gb|EGG18368.1| transcription initiation factor IIA gamma chain [Dictyostelium
fasciculatum]
Length = 118
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 73/104 (70%), Gaps = 2/104 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+G L ++L+EL+ I+ L KVL QFDKS+N AL + VKS+ +FK G
Sbjct: 12 YELYRKSTVGEALTDTLEELLLSQYISKNLHDKVLHQFDKSMNEALSTIVKSKYSFK-GD 70
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGKSSD 105
L+TYRFCDNVWTF++ D +F + E V+++K+VACD S+
Sbjct: 71 LHTYRFCDNVWTFIIDDAKFTVDSGEPITVDRVKLVACDANLSE 114
>gi|156842031|ref|XP_001644385.1| hypothetical protein Kpol_1064p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156115027|gb|EDO16527.1| hypothetical protein Kpol_1064p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 123
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 72/118 (61%), Gaps = 16/118 (13%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+GN L ++LD LI G I +LAM+VL FD+ + +L +S+LT K G
Sbjct: 7 YELYRRSTVGNCLVDALDTLISDGRIEASLAMRVLETFDRVVAESLKDNTQSKLTVK-GL 65
Query: 63 LNTYRFCDNVWTFVLTDVEF--------REVAEIA-------RVNKLKIVACDGKSSD 105
L+TY FCD+VWTF++ + RE+ + + V+KL+IVAC+ K SD
Sbjct: 66 LDTYGFCDDVWTFIIKSCQVTVESSSINRELGDTSGDDHTTIAVDKLRIVACNSKKSD 123
>gi|212530448|ref|XP_002145381.1| transcription initiation factor iia small chain [Talaromyces
marneffei ATCC 18224]
gi|210074779|gb|EEA28866.1| transcription initiation factor iia small chain [Talaromyces
marneffei ATCC 18224]
Length = 101
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 66/94 (70%), Gaps = 2/94 (2%)
Query: 10 TLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFC 69
+LG +L ++LD+LI G I P LAMK+L +D+ + L +V++RLTFK G L+TYRFC
Sbjct: 4 SLGLSLTDTLDDLINEGRIEPQLAMKILSNYDRYVTEILAVQVRARLTFK-GHLDTYRFC 62
Query: 70 DNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
D VWTF++ DV F+ + + +++KIV+C+ K
Sbjct: 63 DEVWTFLIKDVTFKLDNQQTVLADRVKIVSCNSK 96
>gi|401840246|gb|EJT43148.1| TOA2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 122
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 15/117 (12%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+GN+L ++LD LI G I +LAM+VL FDK + L +S+LT K G
Sbjct: 7 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDNTQSKLTVK-GN 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR--------------EVAEIARVNKLKIVACDGKSSD 105
L+TY FCD+VWTF++ + + + + V+KL+IVAC+ K S+
Sbjct: 66 LDTYGFCDDVWTFIVKNCQVTVEDSHHDASQNGSGDSQSVISVDKLRIVACNSKKSE 122
>gi|294659290|ref|XP_461652.2| DEHA2G02486p [Debaryomyces hansenii CBS767]
gi|199433848|emb|CAG90100.2| DEHA2G02486p [Debaryomyces hansenii CBS767]
Length = 124
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 74/118 (62%), Gaps = 15/118 (12%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSK---VKSRLTFK 59
Y+LYR +T+G TL ++LD LI I P LAM++L FD+ I+ L ++ KS+LTFK
Sbjct: 7 YELYRRSTIGTTLTDALDTLISDEKIQPQLAMRILNNFDRIISELLKNESGISKSKLTFK 66
Query: 60 SGKLNTYRFCDNVWTFVLTDV--EFREVAEIA---------RVNKLKIVACDGKSSDD 106
G L+TYRFCD+VWTF++ +V + +V+ V+K KIVAC+ K + D
Sbjct: 67 -GDLHTYRFCDDVWTFIIKNVLIKLTDVSNSGNNDLNDNEINVDKFKIVACNSKKAGD 123
>gi|403213875|emb|CCK68377.1| hypothetical protein KNAG_0A07240 [Kazachstania naganishii CBS
8797]
Length = 119
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 68/114 (59%), Gaps = 12/114 (10%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+GN+L ++LD LI G I +LAM+VL FDK + L S+LT K G
Sbjct: 7 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAENLRDNTGSKLTVK-GD 65
Query: 63 LNTYRFCDNVWTFVLTDVEF-----------REVAEIARVNKLKIVACDGKSSD 105
L+TY FCD+VWTF++ + + +V+KL+IVAC+ K SD
Sbjct: 66 LDTYGFCDDVWTFIVKNCNVTVENTGNGAGNNGANDAIKVDKLRIVACNSKKSD 119
>gi|401624837|gb|EJS42876.1| toa2p [Saccharomyces arboricola H-6]
Length = 122
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 15/117 (12%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+GN+L ++LD LI G I +LAM+VL FDK + L +S+LT K G
Sbjct: 7 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDNTQSKLTVK-GN 65
Query: 63 LNTYRFCDNVWTFVLTDVEF--------------REVAEIARVNKLKIVACDGKSSD 105
L+TY FCD+VWTF++ + + + + V+KL+IVAC+ K S+
Sbjct: 66 LDTYGFCDDVWTFIVKNCQVTVEDSHHDASQSGSGDSQSVISVDKLRIVACNSKKSE 122
>gi|367011024|ref|XP_003680013.1| hypothetical protein TDEL_0B06730 [Torulaspora delbrueckii]
gi|359747671|emb|CCE90802.1| hypothetical protein TDEL_0B06730 [Torulaspora delbrueckii]
Length = 118
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 11/113 (9%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+GN+L ++LD LI G I +LAM+VL FD+ + L +S+LT K G
Sbjct: 7 YELYRRSTVGNSLVDALDTLISDGRIEASLAMRVLETFDRVVAETLRDNTQSKLTVK-GN 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR----------EVAEIARVNKLKIVACDGKSSD 105
L+TY FCD+VWTF++ + + + V+KL+IVAC+ K S+
Sbjct: 66 LDTYGFCDDVWTFIVKNCQVTVEGVPGGNSGDAQTTVSVDKLRIVACNSKKSE 118
>gi|260948724|ref|XP_002618659.1| hypothetical protein CLUG_02119 [Clavispora lusitaniae ATCC 42720]
gi|238848531|gb|EEQ37995.1| hypothetical protein CLUG_02119 [Clavispora lusitaniae ATCC 42720]
Length = 121
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 75/114 (65%), Gaps = 14/114 (12%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSK---VKSRLTFK 59
Y+LYR +T+G+ L ++LD LI I P LAM++L FD+ I+ L ++ KS+LTFK
Sbjct: 7 YELYRRSTIGSALADALDTLISDEKIQPQLAMRILNNFDRIISENLKTERGLCKSKLTFK 66
Query: 60 SGKLNTYRFCDNVWTFV-------LTDVEFREV--AEIARVNKLKIVACDGKSS 104
G L+TYRFCD+VWTF+ +TDV + ++I+ V+K KIVAC+ + +
Sbjct: 67 -GDLHTYRFCDDVWTFIIKNVLIKMTDVSNNDTNDSDIS-VDKFKIVACNSRKA 118
>gi|429862154|gb|ELA36813.1| transcription initiation factor iia small chain [Colletotrichum
gloeosporioides Nara gc5]
Length = 92
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 3/86 (3%)
Query: 19 LDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLT 78
LD+LI I P LAMK+L FD++I AL VK+RLTFK G L+TYRFCD VWTF++
Sbjct: 2 LDDLISEERIHPQLAMKILANFDQAITEALQKSVKARLTFK-GSLSTYRFCDEVWTFLIK 60
Query: 79 DVEFR--EVAEIARVNKLKIVACDGK 102
+V+F+ ++ +K+KIV+C+ K
Sbjct: 61 NVQFKLDSGGQMVSADKVKIVSCNSK 86
>gi|50556660|ref|XP_505738.1| YALI0F22136p [Yarrowia lipolytica]
gi|49651608|emb|CAG78549.1| YALI0F22136p [Yarrowia lipolytica CLIB122]
Length = 111
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 72/105 (68%), Gaps = 2/105 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y +YR +++G L E+LDELI+ TI P LA+KV+ FD+ + L + V++R++FK G+
Sbjct: 7 YNIYRVSSIGTALTEALDELIRDSTIPPQLALKVVEVFDRVMADTLRNDVRNRMSFK-GE 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGKSSDD 106
L+TYR ++VWTF++ V F+ + ++ +K+KIV C+ + + D
Sbjct: 66 LHTYRGLEDVWTFIIRRVVFKMDNNDVVNADKIKIVTCNARKAGD 110
>gi|367000241|ref|XP_003684856.1| hypothetical protein TPHA_0C02690 [Tetrapisispora phaffii CBS 4417]
gi|357523153|emb|CCE62422.1| hypothetical protein TPHA_0C02690 [Tetrapisispora phaffii CBS 4417]
Length = 129
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 22/124 (17%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+G+ L ++LD LI G I +LAMKVL FDK ++ +L +S+L K G
Sbjct: 7 YELYRRSTVGSCLVDALDTLISDGRIEASLAMKVLESFDKVVSESLRENTQSKLNVK-GL 65
Query: 63 LNTYRFCDNVWTFVLTD----VEFREVAEIA-----------------RVNKLKIVACDG 101
L+TY FCD+VWTF++ D VE + A I +V+KL+IVAC+
Sbjct: 66 LDTYGFCDDVWTFIIKDCKVTVESNKTATITNENGEQVTSTTDEQQTIQVDKLRIVACNS 125
Query: 102 KSSD 105
K D
Sbjct: 126 KKGD 129
>gi|366996376|ref|XP_003677951.1| hypothetical protein NCAS_0H02940 [Naumovozyma castellii CBS 4309]
gi|342303821|emb|CCC71604.1| hypothetical protein NCAS_0H02940 [Naumovozyma castellii CBS 4309]
Length = 120
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 70/115 (60%), Gaps = 13/115 (11%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+GN+L ++LD LI G I +LAM+VL FDK ++ L ++++ K G
Sbjct: 7 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVSETLKDNTAAKMSVK-GN 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR------------EVAEIARVNKLKIVACDGKSSD 105
L+TY FCD+VWTF++ + + E + V+KL+IVAC+ K S+
Sbjct: 66 LDTYGFCDDVWTFIVKNCKVTVEGNSNIMDANGESQNVITVDKLRIVACNSKRSE 120
>gi|365759706|gb|EHN01481.1| Toa2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 134
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 15/114 (13%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+GN+L ++LD LI G I +LAM+VL FDK + L +S+LT K G
Sbjct: 7 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDNTQSKLTVK-GN 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR--------------EVAEIARVNKLKIVACDGK 102
L+TY FCD+VWTF++ + + + + V+KL+IVAC+ K
Sbjct: 66 LDTYGFCDDVWTFIVKNCQVTVEDSHHDASQNGSGDSQSVISVDKLRIVACNSK 119
>gi|448079724|ref|XP_004194448.1| Piso0_004942 [Millerozyma farinosa CBS 7064]
gi|448084209|ref|XP_004195547.1| Piso0_004942 [Millerozyma farinosa CBS 7064]
gi|359375870|emb|CCE86452.1| Piso0_004942 [Millerozyma farinosa CBS 7064]
gi|359376969|emb|CCE85352.1| Piso0_004942 [Millerozyma farinosa CBS 7064]
Length = 124
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 73/115 (63%), Gaps = 17/115 (14%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGAL---PSKVKSRLTFK 59
Y+LYR +T+G TL ++LD LI I P LA K+L FD+ I+ L S KS+LTFK
Sbjct: 7 YELYRRSTIGTTLTDALDTLITDEKIQPQLANKILNNFDRIISELLKNESSIAKSKLTFK 66
Query: 60 SGKLNTYRFCDNVWTFVLTDV--EFREVA----------EIARVNKLKIVACDGK 102
G L+TYRFCD+VWTF++ +V + +V+ EI+ V+K KIVAC+ K
Sbjct: 67 -GDLHTYRFCDDVWTFIIKNVIIKLTDVSNSGGDSLGDNEIS-VDKFKIVACNSK 119
>gi|146412514|ref|XP_001482228.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 123
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 14/115 (12%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKV---KSRLTFK 59
Y++YR T+G TL ++LD LI I P LA K+L FD+ I+ L S++ KS+LTFK
Sbjct: 7 YEIYRRATIGTTLADALDSLITDQQIQPQLANKILNNFDRVISDLLKSELGIAKSKLTFK 66
Query: 60 SGKLNTYRFCDNVWTFVLTDV--EFREVAEIA--------RVNKLKIVACDGKSS 104
G L+TYRFCD+VWTF++ +V + +V+ V++ KIVAC+ + +
Sbjct: 67 -GDLHTYRFCDDVWTFIIKNVLIKLTDVSNSGDMLNDNELSVDRFKIVACNARKA 120
>gi|190348655|gb|EDK41150.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 123
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 71/115 (61%), Gaps = 14/115 (12%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSK---VKSRLTFK 59
Y++YR T+G TL ++LD LI I P LA K+L FD+ I+ L S+ KS+LTFK
Sbjct: 7 YEIYRRATIGTTLADALDSLITDQQIQPQLANKILNNFDRVISDLLKSESGIAKSKLTFK 66
Query: 60 SGKLNTYRFCDNVWTFVLTDV--EFREVAEIA--------RVNKLKIVACDGKSS 104
G L+TYRFCD+VWTF++ +V + +V+ V++ KIVAC+ + +
Sbjct: 67 -GDLHTYRFCDDVWTFIIKNVLIKLTDVSNSGDMLNDNELSVDRFKIVACNARKA 120
>gi|254582957|ref|XP_002499210.1| ZYRO0E06622p [Zygosaccharomyces rouxii]
gi|238942784|emb|CAR30955.1| ZYRO0E06622p [Zygosaccharomyces rouxii]
Length = 122
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 15/117 (12%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+GN+L ++LD +I G I +LAM+VL FD+ + L +S+LT K G
Sbjct: 7 YELYRRSTVGNSLVDALDTMISDGRIEASLAMRVLETFDRVVAETLRDNTQSKLTVK-GN 65
Query: 63 LNTYRFCDNVWTFVLTDVEF--------------REVAEIARVNKLKIVACDGKSSD 105
L+TY FCD+VWTF++ + + + V+KL+IVAC+ K S+
Sbjct: 66 LDTYGFCDDVWTFIVKNCQVTVEGSHEGSGHMGGSDGQSTIAVDKLRIVACNSKRSE 122
>gi|344300448|gb|EGW30769.1| hypothetical protein SPAPADRAFT_142741 [Spathaspora passalidarum
NRRL Y-27907]
Length = 125
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 16/117 (13%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSK---VKSRLTFK 59
Y+LYR +T+G TL ++LD LI I P LA ++L FD+ I+ L + KS+LTFK
Sbjct: 7 YELYRRSTIGVTLTDALDTLISDERIPPQLANRILTNFDRIISDLLKHESNIAKSKLTFK 66
Query: 60 SGKLNTYRFCDNVWTFVLTDVEFR------------EVAEIARVNKLKIVACDGKSS 104
G L+TYRFCD+VWTF++ +V + V +V K KIVAC+ + +
Sbjct: 67 -GDLDTYRFCDDVWTFIIKNVLIKMSDVTGGGSGNDSVDTEVQVEKFKIVACNSRKA 122
>gi|412990173|emb|CCO19491.1| transcription initiation factor IIA gamma chain [Bathycoccus
prasinos]
Length = 98
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 62/93 (66%), Gaps = 7/93 (7%)
Query: 15 LQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWT 74
L ++LDE++ +TPT+AM++LL+FD+ I L +K + TF L+TYRFCDNVWT
Sbjct: 3 LTDALDEMVTARELTPTIAMRILLEFDRCIVKELEL-LKQKTTF-GAHLHTYRFCDNVWT 60
Query: 75 FVLTDVEFRE-----VAEIARVNKLKIVACDGK 102
F+L +V+F+ + E +K+K+VACD K
Sbjct: 61 FILENVKFKATNYSGIVEEIHADKVKVVACDSK 93
>gi|344243803|gb|EGV99906.1| Transcription initiation factor IIA subunit 2 [Cricetulus griseus]
Length = 63
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 40/44 (90%)
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 14 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNT 57
>gi|448530103|ref|XP_003869987.1| Toa2 TFIIA small subunit [Candida orthopsilosis Co 90-125]
gi|380354341|emb|CCG23856.1| Toa2 TFIIA small subunit [Candida orthopsilosis]
Length = 128
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 68/120 (56%), Gaps = 19/120 (15%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSK---VKSRLTFK 59
Y+LYR +T+G TL ++LD LI I P LA ++L FD+ I L ++ KS+LTFK
Sbjct: 7 YELYRRSTIGVTLADALDTLISDEKIQPQLANRILNNFDRIIAENLKNESNIAKSKLTFK 66
Query: 60 SGKLNTYRFCDNVWTFVLTDVEFREVAEIA---------------RVNKLKIVACDGKSS 104
G L+TYRFCD+VWTF++ +V + V+K KIVAC+ + +
Sbjct: 67 -GDLDTYRFCDDVWTFIIKNVLVKMTDLSGSTTGSSGGSDGDLELHVDKFKIVACNARKA 125
>gi|353231342|emb|CCD77760.1| putative transcription initiation factor iia (tfiia),gamma chain
[Schistosoma mansoni]
Length = 107
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 37 LLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKI 96
+ +FD+ I+ AL +VK+RL+ + G LNTYR CDNVWT V+ DVE ++ + I V+K+KI
Sbjct: 1 MQKFDQCISNALAKRVKNRLSLR-GHLNTYRNCDNVWTLVMNDVEIKDSSAIMTVDKIKI 59
Query: 97 VACDGKSS 104
VAC+GK++
Sbjct: 60 VACEGKNA 67
>gi|354547727|emb|CCE44462.1| hypothetical protein CPAR2_402630 [Candida parapsilosis]
Length = 129
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 68/121 (56%), Gaps = 20/121 (16%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSK---VKSRLTFK 59
Y+LYR +T+G TL ++LD LI I P LA ++L FD+ I L ++ KS+LTFK
Sbjct: 7 YELYRRSTIGVTLADALDTLISDEKIQPQLANRILNNFDRIIAENLKNESNIAKSKLTFK 66
Query: 60 SGKLNTYRFCDNVWTFVLTDVEFREVAEIA----------------RVNKLKIVACDGKS 103
G L+TYRFCD+VWTF++ +V + V+K KIVAC+ +
Sbjct: 67 -GDLDTYRFCDDVWTFIIKNVLVKMTDLSGSASGSSGGGSDGDLELHVDKFKIVACNARK 125
Query: 104 S 104
+
Sbjct: 126 A 126
>gi|307108792|gb|EFN57031.1| hypothetical protein CHLNCDRAFT_15032, partial [Chlorella
variabilis]
gi|307108793|gb|EFN57032.1| hypothetical protein CHLNCDRAFT_15221, partial [Chlorella
variabilis]
Length = 83
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 5 LYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLN 64
LYR + LG++L ++LD+L++ G + P LA+++L ++D+ + + +KV ++ + K G L+
Sbjct: 6 LYRQSKLGHSLVDALDQLVEEGKLPPQLALRILDEYDEVVFETMENKVTAKGSLK-GHLD 64
Query: 65 TYRFCDNVWTFVLTDVEFR 83
YRFCDNVWTF+L+ FR
Sbjct: 65 IYRFCDNVWTFILSGATFR 83
>gi|159489518|ref|XP_001702744.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280766|gb|EDP06523.1| predicted protein [Chlamydomonas reinhardtii]
Length = 119
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 64/101 (63%), Gaps = 2/101 (1%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MS+Q+YRNT++G +L E+++++ Q +T +A+ VL QFD S++ A+ V + T K+
Sbjct: 1 MSFQIYRNTSVGESLMETIEQMAQEEKLTEEIALAVLKQFDTSMSKAIKEFVTGKATMKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACD 100
+ TY + +NVWTF L VEF+ A +N + +ACD
Sbjct: 61 -NMKTYHYYENVWTFSLEKVEFKLNQAGNGSMNGAQSLACD 100
>gi|68466137|ref|XP_722843.1| hypothetical protein CaO19.12095 [Candida albicans SC5314]
gi|68466430|ref|XP_722697.1| hypothetical protein CaO19.4625 [Candida albicans SC5314]
gi|46444687|gb|EAL03960.1| hypothetical protein CaO19.4625 [Candida albicans SC5314]
gi|46444843|gb|EAL04115.1| hypothetical protein CaO19.12095 [Candida albicans SC5314]
Length = 130
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 21/122 (17%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSK---VKSRLTFK 59
Y+LYR +T+G TL ++LD LI I P LA ++L+ FD+ I L ++ KS+L FK
Sbjct: 7 YELYRRSTIGVTLMDALDTLISDEKIQPQLANRILINFDRIIAENLKNENIVGKSKLIFK 66
Query: 60 SGKLNTYRFCDNVWTFV-------LTDVEFREVAEIAR----------VNKLKIVACDGK 102
G L+TYRFCD+VWTF+ L DV ++ + V+K KIVAC+ +
Sbjct: 67 -GDLDTYRFCDDVWTFIIKNVIIKLNDVSSKDSGGGDKDKDSGDLELNVDKFKIVACNSR 125
Query: 103 SS 104
+
Sbjct: 126 KA 127
>gi|241954206|ref|XP_002419824.1| transcription initiation factor IIA (TFIIA) small subunit, putative
[Candida dubliniensis CD36]
gi|223643165|emb|CAX42039.1| transcription initiation factor IIA (TFIIA) small subunit, putative
[Candida dubliniensis CD36]
Length = 129
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 72/121 (59%), Gaps = 20/121 (16%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSK---VKSRLTFK 59
Y+LYR +T+G TL ++LD LI I P LA ++L+ FD+ I L ++ KS+L FK
Sbjct: 7 YELYRRSTIGVTLMDALDTLISDEKIQPQLANRILINFDRIIAENLKNENIVGKSKLIFK 66
Query: 60 SGKLNTYRFCDNVWTFVLTDV--EFREVAEIA--------------RVNKLKIVACDGKS 103
G L+TYRFCD+VWTF++ +V + +V++ V+K KIVAC+ +
Sbjct: 67 -GDLDTYRFCDDVWTFIIKNVIIKLNDVSKDNNNNSNDKDSGDLELNVDKFKIVACNSRK 125
Query: 104 S 104
+
Sbjct: 126 A 126
>gi|71019177|ref|XP_759819.1| hypothetical protein UM03672.1 [Ustilago maydis 521]
gi|46099617|gb|EAK84850.1| hypothetical protein UM03672.1 [Ustilago maydis 521]
Length = 155
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 39/136 (28%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK--- 59
Y+LYR +++G L ++LDELIQ G I P LAM+VL +FDK+I L VK++ K
Sbjct: 12 YELYRRSSIGMQLTDALDELIQSGHINPVLAMRVLNEFDKAIATNLAKNVKAKSQLKVRL 71
Query: 60 -----------------------------------SGKLNTYRFCDNVWTFVLTDVEFR- 83
G L YR C+ VWTF + + +
Sbjct: 72 LPSALACSLHSADILLDAFLLHHHRVRSTSLFALDQGHLKDYRLCEEVWTFRVRNATLKL 131
Query: 84 EVAEIARVNKLKIVAC 99
+ AEI V+K+KIVAC
Sbjct: 132 DNAEILDVDKVKIVAC 147
>gi|384250264|gb|EIE23744.1| transcription initiation factor IIA, gamma subunit [Coccomyxa
subellipsoidea C-169]
Length = 119
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 5 LYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLN 64
LYR + +G+ L E+LDE+I I L MKV+ +FD +I AL V ++ FK G L+
Sbjct: 6 LYRTSKIGDCLAEALDEMITQDKIPGDLGMKVMAEFDSAIYKALEKDVTTKTLFK-GHLD 64
Query: 65 TYRFCDNVWTFVLTDVEFR 83
+YR+CD VWT V++D FR
Sbjct: 65 SYRYCDQVWTMVMSDTNFR 83
>gi|340960416|gb|EGS21597.1| transcription initiation factor iia small chain-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 142
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 29/135 (21%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS-- 60
Y LYR+ +LG TL ++LDELI I P LAMKVL QFD+ I L KVK+RLTFK
Sbjct: 8 YDLYRHGSLGATLTDALDELIGNEQIDPQLAMKVLSQFDRVIAETLSEKVKARLTFKVIT 67
Query: 61 ----------GKLNTYR--------FCDN-------VWTFVLTDVEFR--EVAEIARVNK 93
G++ + DN +WTF++ +V F+ + + + +K
Sbjct: 68 TRVAVLLLLWGRVMSASSRDALQPTLLDNLSTRFKAIWTFLIRNVHFKLNDAGQTIQADK 127
Query: 94 LKIVACDGKSSDDRK 108
+KIV+C K +++++
Sbjct: 128 IKIVSCSAKRAEEKQ 142
>gi|342319267|gb|EGU11217.1| Transcription initiation factor iia small chain, putative
[Rhodotorula glutinis ATCC 204091]
Length = 123
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
YQ+YR + LG L E+LDELI G I P LA+ L QFDKS + L VK + T K+
Sbjct: 17 YQIYRRSALGTALVEALDELINSGHINPQLALMTLNQFDKSASQTLQKDVKVKSTVKA-H 75
Query: 63 LNTYRFCDNVWTFVLTD--VEFREVAEIARVN-KLKIVACDGKSSD 105
L TY ++VWTF+L + +F +E + K +IVAC KS D
Sbjct: 76 LKTYNHLEDVWTFILENPTFKFENGSETVHASGKCRIVAC--KSGD 119
>gi|449669761|ref|XP_002154588.2| PREDICTED: coiled-coil domain-containing protein 138-like [Hydra
magnipapillata]
Length = 475
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 38/44 (86%)
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G+LNTYRFCDNVWTFVL +V FREV + +V+K+KIVACDGK S
Sbjct: 21 GRLNTYRFCDNVWTFVLNNVTFREVGDAVKVDKVKIVACDGKES 64
>gi|255720977|ref|XP_002545423.1| transcription initiation factor IIA small chain [Candida tropicalis
MYA-3404]
gi|240135912|gb|EER35465.1| transcription initiation factor IIA small chain [Candida tropicalis
MYA-3404]
Length = 212
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSK---VKSRLTFK 59
Y+LYR +T+G TL ++LD LI I P LA ++L FD+ I L ++ KS+L FK
Sbjct: 71 YELYRRSTIGVTLTDALDTLISDEKIQPQLANRILNNFDRIIAENLKNENNLAKSKLVFK 130
Query: 60 SGKLNTYRFCDNVWTFVLTDV 80
G L+TYRFCD+VWTF++ +V
Sbjct: 131 -GDLDTYRFCDDVWTFIIKNV 150
>gi|149236972|ref|XP_001524363.1| transcription initiation factor IIA small chain [Lodderomyces
elongisporus NRRL YB-4239]
gi|146451898|gb|EDK46154.1| transcription initiation factor IIA small chain [Lodderomyces
elongisporus NRRL YB-4239]
Length = 134
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 27/127 (21%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKV---KSRLTFK 59
Y+LYR +T+G TL ++LD LI I P LA ++L FD+ I L + K +LTFK
Sbjct: 7 YELYRRSTIGVTLADALDTLISDEKIQPQLANRILNNFDRIIAENLKNDANIAKLKLTFK 66
Query: 60 SGKLNTYRFCDNVWTFVLTDVEFR----------------------EVAEIARVNKLKIV 97
G L+TYRFCD+VWTF++ +V + EI V+K KIV
Sbjct: 67 -GDLDTYRFCDDVWTFIIKNVIVKLSDVGGGSNSNSNGNSNSNSNDNDLEI-NVDKFKIV 124
Query: 98 ACDGKSS 104
AC+ + +
Sbjct: 125 ACNSRKA 131
>gi|440492317|gb|ELQ74892.1| Transcription initiation factor IIA, gamma subunit
[Trachipleistophora hominis]
Length = 117
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR + +G LQ+++++++ +TP A +L +FD+++ V+S + FK G
Sbjct: 2 YEFYRQSIIGKALQDTIEDMLSNSQLTPVQAKLILEKFDQAVPVVFGRTVQSNMNFKGG- 60
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSDD 106
+ +Y F D VW F+ D ++ R + +KIVACD +S+D
Sbjct: 61 VESYNFVDGVWNFITRDFVMTINNKMVRCDYVKIVACDADTSND 104
>gi|429965972|gb|ELA47969.1| hypothetical protein VCUG_00552 [Vavraia culicis 'floridensis']
Length = 117
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR + +G LQ+++++++ +TP A +L +FD+++ V+S + FK G
Sbjct: 2 YEFYRQSIIGKALQDTIEDMLGNSQLTPAQAKLILEKFDQAVPVVFGRTVQSNMNFKGG- 60
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSDD 106
+ +Y F D VW F+ D ++ R + +KIVACD +S D
Sbjct: 61 VESYNFVDGVWNFITRDFVMTINNKMVRCDYVKIVACDADTSSD 104
>gi|413950275|gb|AFW82924.1| hypothetical protein ZEAMMB73_776594 [Zea mays]
Length = 62
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 47 ALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
AL ++VKS++T K G L+TYRFCDNVWTF+LTD F+ +V K+KIVACD K
Sbjct: 4 ALENQVKSKVTVK-GHLHTYRFCDNVWTFILTDASFKNEEATEQVGKVKIVACDSK 58
>gi|46121847|ref|XP_385477.1| hypothetical protein FG05301.1 [Gibberella zeae PH-1]
Length = 76
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Query: 34 MKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLTDVEFR--EVAEIARV 91
MK+L FD++I AL VK+RL FK G L+TYRFCD VWTF++ +V F+ ++
Sbjct: 1 MKILGNFDQAITEALQKNVKARLQFK-GSLDTYRFCDEVWTFLIKNVTFKMDSGSQSITA 59
Query: 92 NKLKIVACDGK 102
NK+KIV+C+ K
Sbjct: 60 NKVKIVSCNAK 70
>gi|393237931|gb|EJD45470.1| hypothetical protein AURDEDRAFT_165333 [Auricularia delicata
TFB-10046 SS5]
Length = 125
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 5 LYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLN 64
YR T++G +L +SLDEL+ G I P LAMKV+ +FDK G +P K L G ++
Sbjct: 10 FYRFTSIGVSLLDSLDELVGEGKIPPQLAMKVMEKFDKIAAGKVPLVDKKALI--RGHVD 67
Query: 65 TYRFCDNVWTFVLTDVEF 82
YR D VW FVL D +
Sbjct: 68 FYRGADEVWQFVLDDAQL 85
>gi|413950272|gb|AFW82921.1| hypothetical protein ZEAMMB73_776594 [Zea mays]
Length = 62
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 47/58 (81%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK 59
+++LYR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS++T K
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVSNGTLSPELAIQVLVQFDKSMTDALENQVKSKVTVK 60
>gi|413950273|gb|AFW82922.1| hypothetical protein ZEAMMB73_776594 [Zea mays]
Length = 78
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 47/58 (81%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK 59
+++LYR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS++T K
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVSNGTLSPELAIQVLVQFDKSMTDALENQVKSKVTVK 60
>gi|380751758|gb|AFE56220.1| xa5, partial [Oryza sativa Indica Group]
gi|380751760|gb|AFE56221.1| xa5, partial [Oryza sativa Indica Group]
Length = 60
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 47/58 (81%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK 59
+++LYR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS+++ K
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK 60
>gi|413950274|gb|AFW82923.1| hypothetical protein ZEAMMB73_776594 [Zea mays]
Length = 74
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 47/58 (81%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK 59
+++LYR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS++T K
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVSNGTLSPELAIQVLVQFDKSMTDALENQVKSKVTVK 60
>gi|387593319|gb|EIJ88343.1| hypothetical protein NEQG_01787 [Nematocida parisii ERTm3]
gi|387595968|gb|EIJ93590.1| hypothetical protein NEPG_01162 [Nematocida parisii ERTm1]
Length = 118
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
+QLYR + +G Q+ ++E I ITP +L FD ++ + V +++ FK+
Sbjct: 2 FQLYRESNIGKAFQDMIEEKINSQIITPQQGSALLEMFDMAVEQVFNTSVHNKMNFKASI 61
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSDDR 107
++ F D VWTFV+ +I R +++KIVACD + +R
Sbjct: 62 ISYKNFAD-VWTFVVKGFVMTIDDKIVRADRVKIVACDANINSER 105
>gi|380751756|gb|AFE56219.1| xa5, partial [Oryza sativa Indica Group]
Length = 60
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 47/58 (81%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK 59
+++LYR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS+++ +
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIE 60
>gi|378754362|gb|EHY64396.1| hypothetical protein NERG_02567 [Nematocida sp. 1 ERTm2]
Length = 118
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
+QLYR + +G Q+ ++E I ITP +L FD ++ + V +++ FK+
Sbjct: 2 FQLYRESNIGKAFQDMIEEKINSQIITPQQGSALLEMFDMAVEQVFNTSVHNKMNFKASI 61
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSDDR 107
++ F D VWTFV+ +I R +++KIVACD + +R
Sbjct: 62 ISYKNFAD-VWTFVVKGFVMTIDDKIVRADRVKIVACDANINSER 105
>gi|380751764|gb|AFE56223.1| xa5, partial [Oryza sativa Indica Group]
Length = 60
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 46/58 (79%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK 59
+++LYR +T+G L E+LDE++ GT++P LA++VL QFDKS+ AL ++VKS+++ K
Sbjct: 3 TFELYRRSTIGMCLTEALDEMVSSGTLSPELAIQVLEQFDKSMTEALENQVKSKVSIK 60
>gi|380751752|gb|AFE56217.1| xa5, partial [Oryza sativa Indica Group]
gi|380751754|gb|AFE56218.1| xa5, partial [Oryza sativa Indica Group]
Length = 60
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 46/58 (79%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK 59
+++LYR +T+G L E+LDE++ GT++P LA++VL QFDKS+ AL ++VKS+++ K
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLEQFDKSMTEALENQVKSKVSIK 60
>gi|165874598|gb|ABY68179.1| transcription factor IIA gamma subunit [Oryza rufipogon]
Length = 57
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 45/55 (81%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRL 56
+++LYR +T+G L E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS++
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKV 57
>gi|380751762|gb|AFE56222.1| xa5, partial [Oryza sativa Indica Group]
Length = 60
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 46/58 (79%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK 59
+++LYR +T+G E+LDE++ GT++P LA++VL+QFDKS+ AL ++VKS+++ K
Sbjct: 3 TFELYRRSTIGMCPTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK 60
>gi|399950014|gb|AFP65670.1| transcription initiation factor IIA gamma chain [Chroomonas
mesostigmatica CCMP1168]
Length = 117
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MS YR +TLG L+E+L EL++ G I L+ + FDK++ L VK + T K
Sbjct: 1 MSLFQYRASTLGIQLEETLQELLKEGVIDLELSDFIRKHFDKAMMYVLNKWVKDKPTIK- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFR---EVAEIARVNKLKIVACDGK 102
GKL Y+ DNVW+F + E R ++ LKIVAC+ K
Sbjct: 60 GKLKHYQNLDNVWSFYILSPEIRVSNHSLPVSISEPLKIVACENK 104
>gi|399949799|gb|AFP65456.1| transcription initiation factor IIA gamma chain [Chroomonas
mesostigmatica CCMP1168]
Length = 119
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MS YR +TLG L+E+L EL++ G I L+ + FDK++ L VK + T K
Sbjct: 1 MSLFQYRASTLGIQLEETLQELLKEGVIDLELSDFIRKHFDKAMMYVLNKWVKDKPTIK- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFR---EVAEIARVNKLKIVACDGK 102
GKL Y+ DNVW+F + E R ++ LKIVAC+ K
Sbjct: 60 GKLKHYQNLDNVWSFYILSPEIRVSNHSLPVSISEPLKIVACENK 104
>gi|322712510|gb|EFZ04083.1| hypothetical protein MAA_01157 [Metarhizium anisopliae ARSEF 23]
Length = 354
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 40/59 (67%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
Y+LYR +++G L ++LD+LI I P LAMK+L FD++I AL VKSRL FK G
Sbjct: 9 YELYRRSSIGLALTDTLDDLISEERINPQLAMKILGNFDQAITEALQKNVKSRLQFKVG 67
>gi|357126992|ref|XP_003565171.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Brachypodium distachyon]
Length = 63
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 44 INGALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDG 101
++ AL +VKS++ K G L TYRFCDNVWTF+L D FR + ++KIVACD
Sbjct: 1 MSAALQHQVKSKVIIK-GHLRTYRFCDNVWTFILADATFRNEKISETLGRVKIVACDS 57
>gi|393237930|gb|EJD45469.1| hypothetical protein AURDEDRAFT_165332 [Auricularia delicata
TFB-10046 SS5]
Length = 127
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 4 QLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKL 63
+ YR +TLG L ++LDELI I LAMK+L +FD + LP + + ++ K G +
Sbjct: 8 EHYRASTLGLALGDTLDELINEDKIPMALAMKILRKFDAAFAKQLP-EAEGKVGLK-GHI 65
Query: 64 NTYRFCDNVWTFVLTDVEF----REVA--------EIARVNKLKIVACDGKSSDD 106
+ Y+ VWTFVL D + R A E R+ +LKI+A ++DD
Sbjct: 66 DYYQNSSEVWTFVLDDAQVWLCDRSQAGRPDMKRKEDLRLARLKIIATKANTADD 120
>gi|300706857|ref|XP_002995663.1| hypothetical protein NCER_101372 [Nosema ceranae BRL01]
gi|239604851|gb|EEQ81992.1| hypothetical protein NCER_101372 [Nosema ceranae BRL01]
Length = 115
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR + +G L + +DE ++ +TP A +L +FD+SI V L+FK GK
Sbjct: 2 YEFYRQSVIGRALVDIIDEKVRQNLLTPKQAKFILEKFDESIPIVFNRSVTGTLSFK-GK 60
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSDD 106
+ +Y + VW F+ + E + N +KIVACD ++ +
Sbjct: 61 ICSYNHVEGVWKFIAKNFCMYVNNEYYKTNLIKIVACDADTNAE 104
>gi|315046866|ref|XP_003172808.1| transcription initiation factor IIA gamma chain [Arthroderma
gypseum CBS 118893]
gi|311343194|gb|EFR02397.1| transcription initiation factor IIA gamma chain [Arthroderma
gypseum CBS 118893]
Length = 130
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 6/88 (6%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK--S 60
Y+LYR +++G +L ++LD+LI G I P LAMK+L FD+ I L KVK +L+FK +
Sbjct: 7 YELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLADKVKCKLSFKGDT 66
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEI 88
+L+ R+ N+ TF EF +E+
Sbjct: 67 PRLHWRRYLVNI-TF---KTEFEHGSEM 90
>gi|407926414|gb|EKG19381.1| Transcription initiation factor IIA gamma subunit [Macrophomina
phaseolina MS6]
Length = 133
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKV--KSRLTFKSGKL 63
YR T++G L +LDEL I P LA KV FD+ + AL S K R+ FK+ +
Sbjct: 10 YRGTSIGLALIATLDEL---PAIPPQLAEKVRRHFDREVLIALRSHRINKKRMNFKAVRC 66
Query: 64 NTYRFCDNVWTFVLTDVEFR 83
+TYRF D+ W FVL DV+ +
Sbjct: 67 HTYRFYDDRWLFVLKDVKVK 86
>gi|402471788|gb|EJW05342.1| hypothetical protein EDEG_00612 [Edhazardia aedis USNM 41457]
Length = 117
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y YR + +G L E+L++ I IT A ++ +FD I V++ + FK G
Sbjct: 2 YTFYRKSLVGKALAEALEQKINDNEITAQQARAIMEKFDSVIPNVFQRTVQTNINFK-GT 60
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSDD 106
+++Y D VW F T+ E+ R +KIVACD S+ D
Sbjct: 61 VHSYNHVDGVWKFSTTNFVMTVNNELIRSEFVKIVACDADSNID 104
>gi|290996342|ref|XP_002680741.1| predicted protein [Naegleria gruberi]
gi|284094363|gb|EFC47997.1| predicted protein [Naegleria gruberi]
Length = 130
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 4 QLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKL 63
LYR+ TLG L ESL +L + I+ + +V+ +DK + AL +K+ ++++FK+G
Sbjct: 18 NLYRHCTLGLKLNESLQDLKEQDKISEDVIERVMKVYDKCVCNALSNKLSNKVSFKAG-C 76
Query: 64 NTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDG 101
T+ F +NV+ ++L DV + ++ ++ +K+VAC+G
Sbjct: 77 TTFNFNNNVYVWMLNDVNLKMGNTKLDTLDFVKVVACEG 115
>gi|449019240|dbj|BAM82642.1| similar to transcription factor IIA small subunit [Cyanidioschyzon
merolae strain 10D]
Length = 252
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y YR +T+G TL+++LDEL+ G + + A V QFD+++ L KV+ R + G+
Sbjct: 42 YAHYRASTIGLTLEDTLDELLSAGHLQESEAALVWTQFDQAVARYLRRKVRQRSVLR-GR 100
Query: 63 LNTYRFCDNVWTFVLTDVEFR 83
L Y DNVWTF++ R
Sbjct: 101 LAHYNLRDNVWTFLVRHALLR 121
>gi|269862285|ref|XP_002650778.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|269863002|ref|XP_002651058.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|269863352|ref|XP_002651190.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|269863609|ref|XP_002651283.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|269865996|ref|XP_002652119.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|269866266|ref|XP_002652213.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|269866432|ref|XP_002652272.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|269866455|ref|XP_002652279.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220062822|gb|EED41777.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220062838|gb|EED41784.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220062946|gb|EED41844.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220063121|gb|EED41937.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220064812|gb|EED42772.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220064978|gb|EED42867.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220065194|gb|EED42997.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220065633|gb|EED43279.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
Length = 113
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M Y+ YR+T +G L +++DE ++ ITP +++ +FD+ I ++ + + FK
Sbjct: 1 MLYEFYRSTIIGRALLDTIDEKVRSNVITPEQGIQIAQKFDEVIPRIF-DRITNTIGFK- 58
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
GK+ +Y F D VW F+ D+ + +KIVACD ++
Sbjct: 59 GKIVSYNFVDGVWKFLCKDLIVSINNTYYNIPYIKIVACDADTN 102
>gi|269867205|ref|XP_002652520.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220062314|gb|EED41537.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
Length = 113
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M Y+ YR+T +G +++DE ++ ITP +++ +FD+ I ++ + + FK
Sbjct: 1 MLYEFYRSTIIGRAXLDTIDEKVRSNVITPEQGIQIAQKFDEVIPRIF-DRITNTIGFK- 58
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
GK+ +Y F D VW F+ D+ + +KIVACD ++
Sbjct: 59 GKIVSYNFVDGVWKFLCKDLIVSINNTYYNIPYIKIVACDADTN 102
>gi|353238977|emb|CCA70905.1| hypothetical protein PIIN_04841 [Piriformospora indica DSM 11827]
Length = 158
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
+Q+YR +T+G L +++DEL++ I+ +A ++ ++D+S+ L KV S+ +F + K
Sbjct: 7 WQIYRWSTVGLALLDTVDELVRDNMISVEMANIIMARYDESVCSTLRKKVDSKCSF-TAK 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVA 98
T+ D V+ F L +V F+ E ++ V +KI A
Sbjct: 66 CQTFNLVDEVYRFSLKNVRFKMEAGQVVTVPTMKITA 102
>gi|401825362|ref|XP_003886776.1| transcription initiation factor IIA subunit gamma [Encephalitozoon
hellem ATCC 50504]
gi|392997932|gb|AFM97795.1| transcription initiation factor IIA subunit gamma [Encephalitozoon
hellem ATCC 50504]
Length = 113
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +G L++ +DE + +TP +L FD S+ V + ++FK GK
Sbjct: 2 YEFYRQLMVGKALEKIIDEKVNSNVLTPNQGKYILEAFDLSVPVVFNRSVTNSMSFK-GK 60
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDG 101
++ Y D VW F D E R + IVACD
Sbjct: 61 VDFYNHVDGVWRFQTKDFVMSLNNEYFRAGDVNIVACDA 99
>gi|396080891|gb|AFN82511.1| transcription initiation factor IIA subunit gamma [Encephalitozoon
romaleae SJ-2008]
Length = 113
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +G L++ +DE + +TP +L FD S+ V + ++FK GK
Sbjct: 2 YEFYRQLMVGKALEKIIDEKVNSNVLTPNQGKYILEAFDLSVPIVFNKSVTNSMSFK-GK 60
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDG 101
++ Y D VW F D E R + IVACD
Sbjct: 61 VDFYNHVDGVWRFQTKDFVMSLNNEYFRAGDVNIVACDA 99
>gi|452820322|gb|EME27366.1| transcription initiation factor TFIIA small subunit [Galdieria
sulphuraria]
Length = 113
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPS-KVKSRLTFKSG 61
YQ YR +T+G L+E+L+EL + T + +FD+++ L S V +LT K G
Sbjct: 4 YQHYRLSTVGICLEEALEELKEKNIFTEAEVDMIRTKFDRAMAECLSSDSVDKQLTLK-G 62
Query: 62 KLNTYRFCDNVWTFVLTDVE--FREVAEIARVNKLKIVACD 100
L+ YRFCDNVW + D E F + +E V LK++ACD
Sbjct: 63 SLHHYRFCDNVWQLFVKDAEVKFDKKSEFTYVGPLKVIACD 103
>gi|162606312|ref|XP_001713186.1| transcription initiation factor IIA gamma chain [Guillardia theta]
gi|4583664|emb|CAB40402.1| transcription initiation factor IIA gamma chain [Guillardia theta]
Length = 128
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M++ + +T+G L E+L EL+ I + + ++F + +L K+K + K
Sbjct: 1 MTFWHFNVSTVGIELNETLHELLIANVINQDILNIIKMEFQVAFLSSLKKKIKDKPILK- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVN---KLKIVACDGKSSDDRK 108
GKL Y+ CDNVW F +T+ E + +N LKIVA D K++ + K
Sbjct: 60 GKLLHYQNCDNVWMFFVTNPEIKNNNYSLPINLKKPLKIVAYDNKNTKNLK 110
>gi|19073966|ref|NP_584572.1| TRANSCRIPTION INITIATION FACTOR IIA [Encephalitozoon cuniculi
GB-M1]
gi|19068608|emb|CAD25076.1| TRANSCRIPTION INITIATION FACTOR IIA [Encephalitozoon cuniculi
GB-M1]
gi|449329358|gb|AGE95631.1| transcription initiation factor IIa [Encephalitozoon cuniculi]
Length = 113
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +G L++ +DE + ++P +L FD S+ V + ++FK GK
Sbjct: 2 YEFYRQLMVGKVLEKIVDEKVNANVLSPNQGKHILETFDLSVPIVFNKSVTNSMSFK-GK 60
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDG 101
++ Y D VW F T E ++ IVACD
Sbjct: 61 VDFYNHVDGVWRFQTTGFVMSLNNEYFNAGEVNIVACDA 99
>gi|330038424|ref|XP_003239593.1| transcription initiation factor IIA gamma chain [Cryptomonas
paramecium]
gi|327206517|gb|AEA38695.1| transcription initiation factor IIA gamma chain [Cryptomonas
paramecium]
Length = 123
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
YR +T+G L+E+L EL++ I + V +FDK+I L VK + K G+L
Sbjct: 5 YRLSTIGIQLEETLQELLKKKVINFDIIDFVKNEFDKAIINGLKKYVKDKPLIK-GELKH 63
Query: 66 YRFCDNVWTFVLTDVEFREVA---EIARVNKLKIVACDGK 102
Y+ CDNVW F + + + + + + LKI+ACD K
Sbjct: 64 YQNCDNVWIFEINNPQIKVSSYNLPVQFQGILKIIACDLK 103
>gi|160331859|ref|XP_001712636.1| tfIIA-S [Hemiselmis andersenii]
gi|159766085|gb|ABW98311.1| tfIIA-S [Hemiselmis andersenii]
Length = 124
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MS+ YR +T+G L+E+L EL+ G I L+ + +FDK+I L VK + K
Sbjct: 1 MSFAQYRVSTIGIELEETLQELLDEGVIDLDLSELIKKRFDKAIMTVLKKWVKDKPVIK- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFR--EVAEIARVNK-LKIVACDGK 102
GKL Y+ CDNVW F +++ E R + ++N+ LKIVA D K
Sbjct: 60 GKLKHYQNCDNVWVFHVSNPEIRVSSYSLPVQINESLKIVASDSK 104
>gi|303388329|ref|XP_003072399.1| transcription initiation factor IIA subunit gamma [Encephalitozoon
intestinalis ATCC 50506]
gi|303301539|gb|ADM11039.1| transcription initiation factor IIA subunit gamma [Encephalitozoon
intestinalis ATCC 50506]
Length = 113
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+ YR +G L++ +DE + ++P +L FD S+ V + ++FK GK
Sbjct: 2 YEFYRQLMVGKALEKIIDEKVNSNMLSPNQGKYILEAFDLSVPVVFNKSVTNSMSFK-GK 60
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACD 100
++ Y D VW F D E + IVACD
Sbjct: 61 VDFYNHVDGVWRFQTKDFVMSLNNEYFSGGDVNIVACD 98
>gi|148694237|gb|EDL26184.1| mCG2938, isoform CRA_d [Mus musculus]
gi|148694238|gb|EDL26185.1| mCG2938, isoform CRA_d [Mus musculus]
Length = 29
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQ 24
M+YQLYRNTTLGN+LQESLDELIQ
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQ 24
>gi|429962754|gb|ELA42298.1| hypothetical protein VICG_00698 [Vittaforma corneae ATCC 50505]
Length = 113
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
Y T + L E+LD ++ +TPT A VL +F +++ + V + ++FK+ K+ T
Sbjct: 5 YLQTLVARALIETLDVKVRENVLTPTQAQFVLSKFYEAVPKVFNASVANTMSFKA-KMLT 63
Query: 66 YRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSDD 106
Y + D VW F+ D ++ R + ++I+A D + D
Sbjct: 64 YNYVDGVWKFIAKDFGMSINNKVYRTDFIRIIARDADINGD 104
>gi|269862783|ref|XP_002650973.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220065328|gb|EED43082.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
Length = 104
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 11 LGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCD 70
+G L +++DE ++ ITP +++ +FD+ I + ++ + + FK GK+ +Y F D
Sbjct: 2 IGRALLDTIDEKVRSNVITPEQGIQIAQKFDEVI-PRIFDRITNTIGFK-GKIVSYNFVD 59
Query: 71 NVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
VW F+ D+ + +KIVACD ++
Sbjct: 60 GVWKFLCKDLIVSINNTYYNIPYIKIVACDADTN 93
>gi|326436048|gb|EGD81618.1| hypothetical protein PTSG_02335 [Salpingoeca sp. ATCC 50818]
Length = 102
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 6 YRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNT 65
YR T+LG LQ +LDEL++ +I+P L VL FD ++ L S VK R K+
Sbjct: 7 YRKTSLGLALQAALDELLEAQSISPDLMNHVLENFDTTMVKRL-SNVKHRADLKAL-CKE 64
Query: 66 YRFCDNVWTFVLTDVEFR-EVAEIARVNKLKI 96
Y+ + WT L D +F AE +KL +
Sbjct: 65 YKNMKDFWTISLKDCKFTFSKAEELHTDKLTV 96
>gi|320165249|gb|EFW42148.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 83
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 4 QLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK 59
+L+R T LG L + L+E++ G + LA++VL FD+ + L ++V+S++ FK
Sbjct: 3 ELFRETVLGKALIDILNEMVHAGALQSKLALEVLEHFDQVVEHTLNTEVRSKINFK 58
>gi|401881836|gb|EJT46118.1| transcription initiation factor iia small chain [Trichosporon
asahii var. asahii CBS 2479]
gi|406701081|gb|EKD04235.1| transcription initiation factor iia small chain [Trichosporon
asahii var. asahii CBS 8904]
Length = 53
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Query: 34 MKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLTDVEFR 83
M+VL Q S+ L VK + + K G L+TYR CD+VWTFV+ D +FR
Sbjct: 1 MRVLQQ---SLTECLQKGVKQKTSVK-GHLSTYRLCDDVWTFVVKDPQFR 46
>gi|117297099|gb|ABK33246.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297101|gb|ABK33247.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297103|gb|ABK33248.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297105|gb|ABK33249.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297107|gb|ABK33250.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297109|gb|ABK33251.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297111|gb|ABK33252.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297113|gb|ABK33253.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297115|gb|ABK33254.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297117|gb|ABK33255.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297119|gb|ABK33256.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297121|gb|ABK33257.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297123|gb|ABK33258.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297125|gb|ABK33259.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297127|gb|ABK33260.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297129|gb|ABK33261.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297131|gb|ABK33262.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297133|gb|ABK33263.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297135|gb|ABK33264.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297137|gb|ABK33265.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297139|gb|ABK33266.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297141|gb|ABK33267.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297143|gb|ABK33268.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297145|gb|ABK33269.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297147|gb|ABK33270.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297149|gb|ABK33271.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297151|gb|ABK33272.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297153|gb|ABK33273.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297155|gb|ABK33274.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297157|gb|ABK33275.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297159|gb|ABK33276.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297161|gb|ABK33277.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297163|gb|ABK33278.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297165|gb|ABK33279.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297167|gb|ABK33280.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297169|gb|ABK33281.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297171|gb|ABK33282.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297173|gb|ABK33283.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297175|gb|ABK33284.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297177|gb|ABK33285.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297179|gb|ABK33286.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297181|gb|ABK33287.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297183|gb|ABK33288.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297185|gb|ABK33289.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297187|gb|ABK33290.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297189|gb|ABK33291.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297191|gb|ABK33292.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297193|gb|ABK33293.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297195|gb|ABK33294.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297197|gb|ABK33295.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297199|gb|ABK33296.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297201|gb|ABK33297.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297203|gb|ABK33298.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297205|gb|ABK33299.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297207|gb|ABK33300.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297209|gb|ABK33301.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297211|gb|ABK33302.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297213|gb|ABK33303.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297215|gb|ABK33304.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297217|gb|ABK33305.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297219|gb|ABK33306.1| transcription factor IIA gamma subunit [Oryza barthii]
gi|290020262|gb|ADD22314.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020264|gb|ADD22315.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020266|gb|ADD22316.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020268|gb|ADD22317.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020270|gb|ADD22318.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020272|gb|ADD22319.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020274|gb|ADD22320.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020276|gb|ADD22321.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020278|gb|ADD22322.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020280|gb|ADD22323.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020282|gb|ADD22324.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020284|gb|ADD22325.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020286|gb|ADD22326.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020288|gb|ADD22327.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020290|gb|ADD22328.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020292|gb|ADD22329.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020294|gb|ADD22330.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020296|gb|ADD22331.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020298|gb|ADD22332.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020300|gb|ADD22333.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020302|gb|ADD22334.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020304|gb|ADD22335.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020306|gb|ADD22336.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020308|gb|ADD22337.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020310|gb|ADD22338.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020312|gb|ADD22339.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020314|gb|ADD22340.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020316|gb|ADD22341.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020318|gb|ADD22342.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020320|gb|ADD22343.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020322|gb|ADD22344.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020324|gb|ADD22345.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020326|gb|ADD22346.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020328|gb|ADD22347.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020330|gb|ADD22348.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020332|gb|ADD22349.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020334|gb|ADD22350.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020336|gb|ADD22351.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020338|gb|ADD22352.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020340|gb|ADD22353.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020342|gb|ADD22354.1| transcription factor II A gamma subunit [Oryza nivara]
Length = 25
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 17/23 (73%), Positives = 20/23 (86%)
Query: 61 GKLNTYRFCDNVWTFVLTDVEFR 83
G L+TYRFCDNVWTF+LTD F+
Sbjct: 1 GHLHTYRFCDNVWTFILTDAIFK 23
>gi|117582739|gb|ABK41653.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582741|gb|ABK41654.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582743|gb|ABK41655.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582745|gb|ABK41656.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582747|gb|ABK41657.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582749|gb|ABK41658.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582751|gb|ABK41659.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582753|gb|ABK41660.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582755|gb|ABK41661.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582757|gb|ABK41662.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582759|gb|ABK41663.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582761|gb|ABK41664.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582763|gb|ABK41665.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582765|gb|ABK41666.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582767|gb|ABK41667.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582769|gb|ABK41668.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582771|gb|ABK41669.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582773|gb|ABK41670.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582775|gb|ABK41671.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582777|gb|ABK41672.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582779|gb|ABK41673.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582781|gb|ABK41674.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582783|gb|ABK41675.1| transcription factor II A gamma subunit [Oryza rhizomatis]
gi|117582785|gb|ABK41676.1| transcription factor II A gamma subunit [Oryza rhizomatis]
gi|117582787|gb|ABK41677.1| transcription factor II A gamma subunit [Oryza rhizomatis]
gi|117582789|gb|ABK41678.1| transcription factor II A gamma subunit [Oryza rhizomatis]
gi|117582791|gb|ABK41679.1| transcription factor II A gamma subunit [Oryza rhizomatis]
gi|117582793|gb|ABK41680.1| transcription factor II A gamma subunit [Oryza punctata]
gi|117582795|gb|ABK41681.1| transcription factor II A gamma subunit [Oryza punctata]
Length = 19
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 16/19 (84%), Positives = 18/19 (94%)
Query: 61 GKLNTYRFCDNVWTFVLTD 79
G L+TYRFCDNVWTF+LTD
Sbjct: 1 GHLHTYRFCDNVWTFILTD 19
>gi|414870154|tpg|DAA48711.1| TPA: hypothetical protein ZEAMMB73_035659 [Zea mays]
Length = 259
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 55 RLTFKSGKLNTYRFCDNVWTFVLTDVEFR--EVAE-IARVNK 93
L K G L+T R CDNVWTF+L D F+ E+ E +++VN+
Sbjct: 60 HLARKEGHLHTNRVCDNVWTFILIDATFKSAEIQETLSKVNR 101
>gi|403367489|gb|EJY83569.1| Transcription initiation factor IIA subunit 2 [Oxytricha trifallax]
Length = 129
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 5 LYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLN 64
+YR TT+G L++SL EL I L KVL FD I + GK
Sbjct: 6 IYRETTIGAALKDSLKEL--ETQIGEELIGKVLESFDAVICDRFKEVNSNNKCKLQGKCI 63
Query: 65 TYRFCDNVWTFVLTDVEFR--EVAEIARVNKLKIVACD 100
+Y CD+VW F+L + ++ E A+ +IVA D
Sbjct: 64 SYNNCDDVWLFLLDSCSIKGDDIDESAK--NCRIVATD 99
>gi|300176949|emb|CBK25518.2| unnamed protein product [Blastocystis hominis]
Length = 187
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 14/116 (12%)
Query: 4 QLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS--G 61
++YR + LG++L +L +++Q G IT V+L+FD S++ L S+ ++ L G
Sbjct: 7 KVYRFSELGSSLNSALTKMVQEGKITEEQKELVMLKFDNSMSQEL-SRRRNELPRAQLRG 65
Query: 62 KLNTYRFCDNVWTFVL----TDVEFRE--VAEIAR-----VNKLKIVACDGKSSDD 106
+ Y+ + W+F L DVE E + A+ KL V SSDD
Sbjct: 66 DIQFYKRLYDTWSFSLLNWCMDVEGSESYTEQTAKFFSTLAPKLSFVCLKKHSSDD 121
>gi|193875776|gb|ACF24524.1| transcription initiation factor IIa gamma subunit [Gymnochlora
stellata]
Length = 124
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y +YR+T +G TL +L L + I L K+L +FD+ ++ L ++ S K+
Sbjct: 7 YTMYRSTKVGITLIHTLIHLYKKNKIRTFLIFKILNKFDQYMHYLLKKRIASFSVIKAL- 65
Query: 63 LNTYRFCDNVWTFVLTDVEF 82
++ Y+ D++W + F
Sbjct: 66 VDEYKHIDDIWYLTCKCMHF 85
>gi|328853588|gb|EGG02726.1| hypothetical protein MELLADRAFT_91156 [Melampsora larici-populina
98AG31]
Length = 63
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 36 VLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLK 95
+L+ DKS + L +++ S K G L+TYR CD V +I V ++K
Sbjct: 1 MLVHLDKSASQVLSTQLCSNCQIK-GHLSTYRLCDEVCG-----------EQIGPVKRVK 48
Query: 96 IVACDGKS 103
IVAC G +
Sbjct: 49 IVACKGNA 56
>gi|414877984|tpg|DAA55115.1| TPA: hypothetical protein ZEAMMB73_975351, partial [Zea mays]
Length = 137
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 59 KSGKLNTYRFCDNVWTFVLTDVEFR--EVAE-IARVNKLKIVA 98
+ G L+T R DNVWTF+LTD F+ E+ E +++VN L ++
Sbjct: 83 EQGHLHTNRVYDNVWTFILTDATFKSAEIQETLSKVNLLSPLS 125
>gi|396465256|ref|XP_003837236.1| hypothetical protein LEMA_P034700.1 [Leptosphaeria maculans JN3]
gi|312213794|emb|CBX93796.1| hypothetical protein LEMA_P034700.1 [Leptosphaeria maculans JN3]
Length = 76
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 20/26 (76%)
Query: 34 MKVLLQFDKSINGALPSKVKSRLTFK 59
MK+LL FDK++ L KVKSRLTFK
Sbjct: 1 MKILLNFDKAVADVLSDKVKSRLTFK 26
>gi|367038069|ref|XP_003649415.1| hypothetical protein THITE_2084589 [Thielavia terrestris NRRL
8126]
gi|346996676|gb|AEO63079.1| hypothetical protein THITE_2084589 [Thielavia terrestris NRRL
8126]
Length = 136
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 5 LYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK-SGKL 63
+Y TL L ++LD+LI I P LA V+ + K + + V++ T + +G+L
Sbjct: 6 VYDKCTLLTALTDALDDLILEQKIEPQLANIVVSKMRKVMVHKFGALVRNSGTVEITGQL 65
Query: 64 NTYRFCDNVWTFVLTDVEF 82
+Y D++W F L D +
Sbjct: 66 LSYNHYDHIWIFRLRDAKL 84
>gi|414877986|tpg|DAA55117.1| TPA: hypothetical protein ZEAMMB73_975351 [Zea mays]
Length = 98
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 56 LTFKSGKLNTYRFCDNVWTFVLTDVEFREVAEI 88
+ + G L+T R DNVWTF+LTD F+ AEI
Sbjct: 1 MQWNKGHLHTNRVYDNVWTFILTDATFKS-AEI 32
>gi|373469128|ref|ZP_09560337.1| TIGR02687 family protein [Lachnospiraceae bacterium oral taxon 082
str. F0431]
gi|371765010|gb|EHO53374.1| TIGR02687 family protein [Lachnospiraceae bacterium oral taxon 082
str. F0431]
Length = 772
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 30 PTLAMKVLLQF----DKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLTDVEFREV 85
P+L VL F KS+ G LP +KS ++ KSG + T F DN+ VL + E+
Sbjct: 149 PSLTNFVLTLFVTYAAKSVMGELPESLKSMVSHKSGNIIT--FMDNLKNSVLYKDRYNEL 206
Query: 86 AEIARVNKLKIV 97
+E N+L IV
Sbjct: 207 SEFVS-NELNIV 217
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,505,168,506
Number of Sequences: 23463169
Number of extensions: 48274210
Number of successful extensions: 104282
Number of sequences better than 100.0: 388
Number of HSP's better than 100.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 103535
Number of HSP's gapped (non-prelim): 395
length of query: 108
length of database: 8,064,228,071
effective HSP length: 76
effective length of query: 32
effective length of database: 6,281,027,227
effective search space: 200992871264
effective search space used: 200992871264
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)