Your job contains 1 sequence.
>psy7895
MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS
GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSDDRK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7895
(108 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0013347 - symbol:TfIIA-S "Transcription-factor-IIA... 442 1.1e-41 1
UNIPROTKB|Q32L01 - symbol:GTF2A2 "Transcription initiatio... 393 1.7e-36 1
UNIPROTKB|E2R3G8 - symbol:GTF2A2 "Transcription initiatio... 393 1.7e-36 1
UNIPROTKB|P52657 - symbol:GTF2A2 "Transcription initiatio... 393 1.7e-36 1
UNIPROTKB|F2Z4Z2 - symbol:GTF2A2 "Transcription initiatio... 393 1.7e-36 1
MGI|MGI:1933289 - symbol:Gtf2a2 "general transcription fa... 393 1.7e-36 1
RGD|620720 - symbol:Gtf2a2 "general transcription factor ... 393 1.7e-36 1
ZFIN|ZDB-GENE-050522-513 - symbol:gtf2a2 "general transcr... 390 3.5e-36 1
UNIPROTKB|F1NE94 - symbol:GTF2A2 "Transcription initiatio... 286 3.6e-25 1
TAIR|locus:2136017 - symbol:AT4G24440 species:3702 "Arabi... 285 4.6e-25 1
WB|WBGene00013736 - symbol:Y111B2A.13 species:6239 "Caeno... 283 7.6e-25 1
UNIPROTKB|H0YK39 - symbol:GTF2A2 "Transcription initiatio... 282 9.7e-25 1
POMBASE|SPCC553.11c - symbol:SPCC553.11c "transcription f... 277 3.3e-24 1
DICTYBASE|DDB_G0285343 - symbol:gtf2a2 "transcription fac... 268 2.9e-23 1
FB|FBgn0040338 - symbol:TfIIA-S-2 "TfIIA-S-2" species:722... 259 2.6e-22 1
ASPGD|ASPL0000043754 - symbol:AN2181 species:162425 "Emer... 258 3.4e-22 1
WB|WBGene00015150 - symbol:B0336.13 species:6239 "Caenorh... 242 1.7e-20 1
SGD|S000001541 - symbol:TOA2 "TFIIA small subunit" specie... 212 2.5e-17 1
CGD|CAL0003642 - symbol:TOA2 species:5476 "Candida albica... 184 2.9e-17 2
UNIPROTKB|A8MYR4 - symbol:GTF2A2 "Transcription initiatio... 209 5.3e-17 1
>FB|FBgn0013347 [details] [associations]
symbol:TfIIA-S "Transcription-factor-IIA-S" species:7227
"Drosophila melanogaster" [GO:0005672 "transcription factor TFIIA
complex" evidence=ISS;IDA] [GO:0001128 "RNA polymerase II
transcription coactivator activity involved in preinitiation
complex assembly" evidence=IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001129 "TBP-class protein binding RNA polymerase II
transcription factor activity involved in preinitiation complex
assembly" evidence=IPI] [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=NAS] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR003194 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872
Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224
EMBL:AE014297 GO:GO:0022008 GO:GO:0045944 GO:GO:0001129
eggNOG:COG5123 KO:K03123 OMA:LTFKGHL GO:GO:0005672
Gene3D:1.10.287.190 Gene3D:2.30.18.10 PANTHER:PTHR10966
SUPFAM:SSF50784 SUPFAM:SSF47396 GeneTree:ENSGT00390000014572
EMBL:X83271 EMBL:AY113478 EMBL:BT044069 PIR:A54883
RefSeq:NP_524467.1 UniGene:Dm.20591 ProteinModelPortal:P52656
SMR:P52656 DIP:DIP-23236N IntAct:P52656 MINT:MINT-982942
STRING:P52656 PaxDb:P52656 PRIDE:P52656 EnsemblMetazoa:FBtr0084526
GeneID:42822 KEGG:dme:Dmel_CG5163 UCSC:CG5163-RA CTD:42822
FlyBase:FBgn0013347 InParanoid:P52656 OrthoDB:EOG42V6ZT
PhylomeDB:P52656 GenomeRNAi:42822 NextBio:830743 Bgee:P52656
GermOnline:CG5163 Uniprot:P52656
Length = 106
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 85/105 (80%), Positives = 94/105 (89%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
MSYQLYRNTTLGNTLQESLDELIQYG ITP LA KVLLQFDKSIN AL +VK+R+TFK+
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSSD 105
GKLNTYRFCDNVWT +L DVEFREV EI +V+K+KIVACDGKS +
Sbjct: 61 GKLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGKSGE 105
>UNIPROTKB|Q32L01 [details] [associations]
symbol:GTF2A2 "Transcription initiation factor IIA subunit
2" species:9913 "Bos taurus" [GO:0051123 "RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0005672 "transcription factor TFIIA complex" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IEA] InterPro:IPR003194 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872
Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224
GO:GO:0051091 GO:GO:0045944 GO:GO:0003713 GO:GO:0051123
eggNOG:COG5123 HOGENOM:HOG000167251 KO:K03123 GO:GO:0005672
Gene3D:1.10.287.190 Gene3D:2.30.18.10 PANTHER:PTHR10966
SUPFAM:SSF50784 SUPFAM:SSF47396 GeneTree:ENSGT00390000014572
OMA:LIQTQQI CTD:2958 HOVERGEN:HBG000826 OrthoDB:EOG4RBQM3
EMBL:DAAA02028802 EMBL:BC109831 IPI:IPI00691790
RefSeq:NP_001032708.1 UniGene:Bt.29289 SMR:Q32L01 STRING:Q32L01
Ensembl:ENSBTAT00000013602 GeneID:613479 KEGG:bta:613479
InParanoid:Q32L01 NextBio:20898597 Uniprot:Q32L01
Length = 109
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 75/104 (72%), Positives = 91/104 (87%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNT 103
>UNIPROTKB|E2R3G8 [details] [associations]
symbol:GTF2A2 "Transcription initiation factor IIA subunit
2" species:9615 "Canis lupus familiaris" [GO:0051123 "RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0017025 "TBP-class
protein binding" evidence=IEA] [GO:0005672 "transcription factor
TFIIA complex" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] InterPro:IPR003194
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR015871
InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415
ProDom:PD009224 GO:GO:0051091 GO:GO:0045944 GO:GO:0003713
GO:GO:0051123 KO:K03123 GO:GO:0005672 Gene3D:1.10.287.190
Gene3D:2.30.18.10 PANTHER:PTHR10966 SUPFAM:SSF50784 SUPFAM:SSF47396
GeneTree:ENSGT00390000014572 OMA:LIQTQQI CTD:2958 EMBL:AAEX03016180
RefSeq:XP_535502.1 RefSeq:XP_864467.2 ProteinModelPortal:E2R3G8
SMR:E2R3G8 Ensembl:ENSCAFT00000026391 GeneID:478327 KEGG:cfa:478327
NextBio:20853678 Uniprot:E2R3G8
Length = 109
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 75/104 (72%), Positives = 91/104 (87%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNT 103
>UNIPROTKB|P52657 [details] [associations]
symbol:GTF2A2 "Transcription initiation factor IIA subunit
2" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005672
"transcription factor TFIIA complex" evidence=IDA] [GO:0017025
"TBP-class protein binding" evidence=IPI] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0051123 "RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] Reactome:REACT_71
InterPro:IPR003194 InterPro:IPR009083 InterPro:IPR009088
InterPro:IPR015871 InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751
PIRSF:PIRSF009415 ProDom:PD009224 Reactome:REACT_116125
GO:GO:0019048 GO:GO:0016032 GO:GO:0051091 GO:GO:0045944
GO:GO:0003713 GO:GO:0006368 EMBL:CH471082 Reactome:REACT_1788
EMBL:AC092755 GO:GO:0051123 eggNOG:COG5123 HOGENOM:HOG000167251
KO:K03123 GO:GO:0005672 Gene3D:1.10.287.190 Gene3D:2.30.18.10
PANTHER:PTHR10966 SUPFAM:SSF50784 SUPFAM:SSF47396 OMA:LIQTQQI
EMBL:X81713 EMBL:U14193 EMBL:U21242 EMBL:BT007362 EMBL:CR542192
EMBL:BC000287 EMBL:BC001919 IPI:IPI00004353 PIR:I38952
RefSeq:NP_004483.1 UniGene:Hs.512934 PDB:1NVP PDBsum:1NVP
ProteinModelPortal:P52657 SMR:P52657 IntAct:P52657 STRING:P52657
PhosphoSite:P52657 DMDM:1729806 PaxDb:P52657 PRIDE:P52657
DNASU:2958 Ensembl:ENST00000396060 Ensembl:ENST00000396061
Ensembl:ENST00000396063 GeneID:2958 KEGG:hsa:2958 UCSC:uc002agg.3
CTD:2958 GeneCards:GC15M059930 HGNC:HGNC:4647 MIM:600519
neXtProt:NX_P52657 PharmGKB:PA29034 HOVERGEN:HBG000826
InParanoid:P52657 OrthoDB:EOG4RBQM3 PhylomeDB:P52657
BindingDB:P52657 ChEMBL:CHEMBL4283 EvolutionaryTrace:P52657
GenomeRNAi:2958 NextBio:11726 ArrayExpress:P52657 Bgee:P52657
CleanEx:HS_GTF2A2 Genevestigator:P52657 GermOnline:ENSG00000140307
Uniprot:P52657
Length = 109
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 75/104 (72%), Positives = 91/104 (87%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNT 103
>UNIPROTKB|F2Z4Z2 [details] [associations]
symbol:GTF2A2 "Transcription initiation factor IIA subunit
2" species:9823 "Sus scrofa" [GO:0051123 "RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0005672 "transcription factor TFIIA complex" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IEA] InterPro:IPR003194 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872
Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224
GO:GO:0051091 GO:GO:0045944 GO:GO:0003713 GO:GO:0051123 KO:K03123
GO:GO:0005672 Gene3D:1.10.287.190 Gene3D:2.30.18.10
PANTHER:PTHR10966 SUPFAM:SSF50784 SUPFAM:SSF47396
GeneTree:ENSGT00390000014572 OMA:LIQTQQI EMBL:CU914311
RefSeq:XP_003121518.1 RefSeq:XP_003121519.1 RefSeq:XP_003121520.1
UniGene:Ssc.7058 SMR:F2Z4Z2 Ensembl:ENSSSCT00000005062
GeneID:100521701 KEGG:ssc:100521701 Uniprot:F2Z4Z2
Length = 109
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 75/104 (72%), Positives = 91/104 (87%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNT 103
>MGI|MGI:1933289 [details] [associations]
symbol:Gtf2a2 "general transcription factor II A, 2"
species:10090 "Mus musculus" [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA] [GO:0005672 "transcription factor TFIIA
complex" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051123 "RNA polymerase II transcriptional
preinitiation complex assembly" evidence=ISO] InterPro:IPR003194
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR015871
InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415
ProDom:PD009224 MGI:MGI:1933289 GO:GO:0051091 GO:GO:0045944
GO:GO:0003713 GO:GO:0051123 eggNOG:COG5123 HOGENOM:HOG000167251
KO:K03123 GO:GO:0005672 Gene3D:1.10.287.190 Gene3D:2.30.18.10
PANTHER:PTHR10966 SUPFAM:SSF50784 SUPFAM:SSF47396
GeneTree:ENSGT00390000014572 OMA:LIQTQQI CTD:2958
HOVERGEN:HBG000826 OrthoDB:EOG4RBQM3 EMBL:BC048705 IPI:IPI00989958
RefSeq:NP_001034608.1 UniGene:Mm.293117 ProteinModelPortal:Q80ZM7
SMR:Q80ZM7 STRING:Q80ZM7 PhosphoSite:Q80ZM7 PaxDb:Q80ZM7
PRIDE:Q80ZM7 Ensembl:ENSMUST00000118198 Ensembl:ENSMUST00000119413
GeneID:235459 KEGG:mmu:235459 NextBio:382690 Bgee:Q80ZM7
CleanEx:MM_GTF2A2 Genevestigator:Q80ZM7
GermOnline:ENSMUSG00000033543 Uniprot:Q80ZM7
Length = 109
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 75/104 (72%), Positives = 91/104 (87%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNT 103
>RGD|620720 [details] [associations]
symbol:Gtf2a2 "general transcription factor IIA, 2" species:10116
"Rattus norvegicus" [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA;ISO] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISO] [GO:0005672
"transcription factor TFIIA complex" evidence=IEA;ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA;ISO] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISO] [GO:0051123 "RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA;ISO]
InterPro:IPR003194 InterPro:IPR009083 InterPro:IPR009088
InterPro:IPR015871 InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751
PIRSF:PIRSF009415 ProDom:PD009224 RGD:620720 GO:GO:0051091
GO:GO:0045944 GO:GO:0003713 GO:GO:0051123 eggNOG:COG5123
HOGENOM:HOG000167251 KO:K03123 GO:GO:0005672 Gene3D:1.10.287.190
Gene3D:2.30.18.10 PANTHER:PTHR10966 SUPFAM:SSF50784 SUPFAM:SSF47396
GeneTree:ENSGT00390000014572 CTD:2958 HOVERGEN:HBG000826
OrthoDB:EOG4RBQM3 EMBL:AF000944 IPI:IPI00197501 RefSeq:NP_445797.1
RefSeq:XP_002724568.1 UniGene:Rn.4053 ProteinModelPortal:O08950
SMR:O08950 STRING:O08950 PRIDE:O08950 Ensembl:ENSRNOT00000014706
GeneID:100365822 GeneID:83828 KEGG:rno:100365822 KEGG:rno:83828
UCSC:RGD:620720 InParanoid:O08950 NextBio:616460
ArrayExpress:O08950 Genevestigator:O08950
GermOnline:ENSRNOG00000011062 Uniprot:O08950
Length = 109
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 75/104 (72%), Positives = 91/104 (87%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV E+ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNT 103
>ZFIN|ZDB-GENE-050522-513 [details] [associations]
symbol:gtf2a2 "general transcription factor IIA, 2"
species:7955 "Danio rerio" [GO:0005672 "transcription factor TFIIA
complex" evidence=IEA] [GO:0006367 "transcription initiation from
RNA polymerase II promoter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003194 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872
Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224
ZFIN:ZDB-GENE-050522-513 GO:GO:0006355 GO:GO:0006367 eggNOG:COG5123
HOGENOM:HOG000167251 KO:K03123 GO:GO:0005672 Gene3D:1.10.287.190
Gene3D:2.30.18.10 PANTHER:PTHR10966 SUPFAM:SSF50784 SUPFAM:SSF47396
GeneTree:ENSGT00390000014572 OMA:LIQTQQI HOVERGEN:HBG000826
OrthoDB:EOG4RBQM3 EMBL:CR450827 EMBL:BC095322 IPI:IPI00507467
RefSeq:NP_001018441.1 UniGene:Dr.78839 SMR:Q503H9 STRING:Q503H9
Ensembl:ENSDART00000075757 GeneID:798997 KEGG:dre:798997
InParanoid:Q503H9 NextBio:20933639 Uniprot:Q503H9
Length = 109
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 74/104 (71%), Positives = 92/104 (88%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL ++V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFR- 59
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
G LNTYRFCDNVWTFVL DVEFREV ++ +V+K+KIVACDGK++
Sbjct: 60 GSLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGKNT 103
>UNIPROTKB|F1NE94 [details] [associations]
symbol:GTF2A2 "Transcription initiation factor IIA subunit
2" species:9031 "Gallus gallus" [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0005672
"transcription factor TFIIA complex" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0051123 "RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] InterPro:IPR003194
InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872
Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 GO:GO:0051091
GO:GO:0045944 GO:GO:0003713 GO:GO:0051123 GO:GO:0005672
Gene3D:1.10.287.190 Gene3D:2.30.18.10 PANTHER:PTHR10966
SUPFAM:SSF50784 GeneTree:ENSGT00390000014572 EMBL:AADN02040402
IPI:IPI00813844 Ensembl:ENSGALT00000006017 OMA:MTEALEM
ArrayExpress:F1NE94 Uniprot:F1NE94
Length = 86
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 53/77 (68%), Positives = 67/77 (87%)
Query: 28 ITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGKLNTYRFCDNVWTFVLTDVEFREVAE 87
ITP LA++VLLQFDK+IN AL +V++R+ F+ G LNTYRFCDNVWTFVL DVEFREV E
Sbjct: 5 ITPQLALQVLLQFDKAINSALAQRVRNRVNFR-GSLNTYRFCDNVWTFVLNDVEFREVTE 63
Query: 88 IARVNKLKIVACDGKSS 104
+ +V+K+KIVACDGK++
Sbjct: 64 LVKVDKVKIVACDGKNT 80
>TAIR|locus:2136017 [details] [associations]
symbol:AT4G24440 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005672 "transcription
factor TFIIA complex" evidence=IEA;ISS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=IEA;ISS]
[GO:0000394 "RNA splicing, via endonucleolytic cleavage and
ligation" evidence=RCA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=RCA] InterPro:IPR003194
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR015871
InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415
ProDom:PD009224 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 GO:GO:0042742 EMBL:AL161561 GO:GO:0006367
EMBL:AL078637 EMBL:X98862 EMBL:AJ223634 EMBL:AY072192 EMBL:AY096423
EMBL:AY085740 IPI:IPI00525864 PIR:T09907 RefSeq:NP_194175.1
RefSeq:NP_849434.1 UniGene:At.25012 ProteinModelPortal:Q39236
SMR:Q39236 IntAct:Q39236 STRING:Q39236 PaxDb:Q39236 PRIDE:Q39236
EnsemblPlants:AT4G24440.1 EnsemblPlants:AT4G24440.2 GeneID:828546
KEGG:ath:AT4G24440 TAIR:At4g24440 eggNOG:COG5123
HOGENOM:HOG000167251 InParanoid:Q39236 KO:K03123 OMA:LTFKGHL
PhylomeDB:Q39236 ProtClustDB:CLSN2685419 Genevestigator:Q39236
GO:GO:0005672 Gene3D:1.10.287.190 Gene3D:2.30.18.10
PANTHER:PTHR10966 SUPFAM:SSF50784 SUPFAM:SSF47396 Uniprot:Q39236
Length = 106
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 53/101 (52%), Positives = 78/101 (77%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+++LYR +T+G L E+LDE++Q GT++P LA++VL+QFDKS+ AL S+VK++++ K G
Sbjct: 3 TFELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSMTEALESQVKTKVSIK-G 61
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGK 102
L+TYRFCDNVWTF+L D F+ V+++KIVACD K
Sbjct: 62 HLHTYRFCDNVWTFILQDAMFKSDDRQENVSRVKIVACDSK 102
>WB|WBGene00013736 [details] [associations]
symbol:Y111B2A.13 species:6239 "Caenorhabditis elegans"
[GO:0005672 "transcription factor TFIIA complex" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR003194 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872
Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224
GO:GO:0006355 GO:GO:0006367 EMBL:AL132904 eggNOG:COG5123
HOGENOM:HOG000167251 KO:K03123 GO:GO:0005672 Gene3D:1.10.287.190
Gene3D:2.30.18.10 PANTHER:PTHR10966 SUPFAM:SSF50784 SUPFAM:SSF47396
RefSeq:NP_499644.1 ProteinModelPortal:Q9NEX2 SMR:Q9NEX2
STRING:Q9NEX2 EnsemblMetazoa:Y111B2A.13.1
EnsemblMetazoa:Y111B2A.13.2 GeneID:176682 KEGG:cel:CELE_Y111B2A.13
UCSC:Y111B2A.13 CTD:176682 WormBase:Y111B2A.13
GeneTree:ENSGT00390000014572 InParanoid:Q9NEX2 OMA:LIQTQQI
NextBio:893588 Uniprot:Q9NEX2
Length = 113
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 50/102 (49%), Positives = 74/102 (72%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
+YQLYRNTTLG LQ++LD+ + I +L+ K++ FDKSIN LP K K+++ F++
Sbjct: 5 NYQLYRNTTLGQALQKTLDDFVGDQMIPDSLSKKIMDSFDKSINKILPHKAKNKVNFRAD 64
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKS 103
KL YR+CDNVWTF++ ++ R+ E V++LKIVACDG++
Sbjct: 65 KLRAYRYCDNVWTFIVEQIDLRDAVEGGTVDRLKIVACDGQT 106
>UNIPROTKB|H0YK39 [details] [associations]
symbol:GTF2A2 "Transcription initiation factor IIA subunit
2" species:9606 "Homo sapiens" [GO:0005672 "transcription factor
TFIIA complex" evidence=IEA] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR003194
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR015871
InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415
ProDom:PD009224 GO:GO:0006367 EMBL:AC092755 GO:GO:0005672
Gene3D:1.10.287.190 Gene3D:2.30.18.10 PANTHER:PTHR10966
SUPFAM:SSF50784 SUPFAM:SSF47396 HGNC:HGNC:4647
Ensembl:ENST00000559706 Bgee:H0YK39 Uniprot:H0YK39
Length = 72
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 56/76 (73%), Positives = 66/76 (86%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQ---ITPQLALQVLLQFDKAINAALAQRVRNRVNFR- 56
Query: 61 GKLNTYRFCDNVWTFV 76
G LNTYRFCDNVWTFV
Sbjct: 57 GSLNTYRFCDNVWTFV 72
>POMBASE|SPCC553.11c [details] [associations]
symbol:SPCC553.11c "transcription factor TFIIA complex
small subunit (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005672 "transcription factor TFIIA complex" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=ISO] InterPro:IPR003194 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872
Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224
PomBase:SPCC553.11c GO:GO:0005829 GO:GO:0006355 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006367 GO:GO:0000991
eggNOG:COG5123 HOGENOM:HOG000167251 GO:GO:0005672
Gene3D:1.10.287.190 Gene3D:2.30.18.10 PANTHER:PTHR10966
SUPFAM:SSF50784 SUPFAM:SSF47396 OrthoDB:EOG4J40SP PIR:T41393
RefSeq:NP_587763.2 STRING:O74948 EnsemblFungi:SPCC553.11c.1
GeneID:2538859 NextBio:20800040 Uniprot:O74948
Length = 109
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 55/102 (53%), Positives = 73/102 (71%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +++G +L ++LD+LI G I+P LAMKVL FDKS+ AL KV+SRLTFK G
Sbjct: 5 YELYRRSSIGISLTDALDDLISQGKISPQLAMKVLFNFDKSMTEALAEKVRSRLTFK-GH 63
Query: 63 LNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDGKSS 104
L+TYRFCD VWTF++ + FR E NK++IVAC + S
Sbjct: 64 LDTYRFCDEVWTFIIKNPSFRFDNETVTSNKIRIVACATRDS 105
>DICTYBASE|DDB_G0285343 [details] [associations]
symbol:gtf2a2 "transcription factor IIA, small chain"
species:44689 "Dictyostelium discoideum" [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=IEA;ISS]
[GO:0005672 "transcription factor TFIIA complex" evidence=IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003194
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR015871
InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415
ProDom:PD009224 dictyBase:DDB_G0285343 GenomeReviews:CM000153_GR
GO:GO:0006355 EMBL:AAFI02000079 GO:GO:0006367 eggNOG:COG5123
KO:K03123 OMA:LTFKGHL GO:GO:0005672 Gene3D:1.10.287.190
Gene3D:2.30.18.10 PANTHER:PTHR10966 SUPFAM:SSF50784 SUPFAM:SSF47396
RefSeq:XP_638249.1 HSSP:P52657 ProteinModelPortal:Q54ND1
STRING:Q54ND1 EnsemblProtists:DDB0216276 GeneID:8625057
KEGG:ddi:DDB_G0285343 ProtClustDB:CLSZ2497169 Uniprot:Q54ND1
Length = 115
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 52/104 (50%), Positives = 76/104 (73%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+G L ++L+EL+ I+ +L K+L QFDK+IN AL + VK++ TFK G
Sbjct: 8 YELYRKSTIGEALTDTLEELLINQYISNSLYQKILTQFDKTINEALSNTVKAKTTFK-GS 66
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGKSSD 105
L+TYRFCD+VWTF+L + +F+ E EI +V+++KIVACD D
Sbjct: 67 LHTYRFCDSVWTFILENAQFKTEANEIVKVDRVKIVACDANVQD 110
>FB|FBgn0040338 [details] [associations]
symbol:TfIIA-S-2 "TfIIA-S-2" species:7227 "Drosophila
melanogaster" [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0005672 "transcription
factor TFIIA complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=NAS] InterPro:IPR003194
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR015871
InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415
ProDom:PD009224 GO:GO:0006355 EMBL:AE014298 GO:GO:0006367
eggNOG:COG5123 KO:K03123 GO:GO:0005672 Gene3D:1.10.287.190
Gene3D:2.30.18.10 PANTHER:PTHR10966 SUPFAM:SSF50784 SUPFAM:SSF47396
GeneTree:ENSGT00390000014572 EMBL:BT120286 EMBL:BT120287
RefSeq:NP_569877.1 UniGene:Dm.7611 ProteinModelPortal:Q9W5B9
SMR:Q9W5B9 DIP:DIP-20039N IntAct:Q9W5B9 MINT:MINT-1025376
STRING:Q9W5B9 PRIDE:Q9W5B9 EnsemblMetazoa:FBtr0070184 GeneID:31048
KEGG:dme:Dmel_CG11639 UCSC:CG11639-RA CTD:31048 FlyBase:FBgn0040338
InParanoid:Q9W5B9 OMA:SLMETIE OrthoDB:EOG4CZ8ZD PhylomeDB:Q9W5B9
GenomeRNAi:31048 NextBio:771682 Bgee:Q9W5B9 GermOnline:CG11639
Uniprot:Q9W5B9
Length = 107
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 52/101 (51%), Positives = 71/101 (70%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKS 60
M+YQ YR TTLG TLQ++LDE+++ G IT +A VLL++DKSI+ AL S ++F +
Sbjct: 1 MNYQHYRATTLGRTLQDTLDEMMERGDITKKIANLVLLRYDKSISTALKDHGTSNMSFTA 60
Query: 61 GKLNTYRFCDNVWTFVLTDVEFREVAEIARVNKLKIVACDG 101
+L T+R CDNVWT +L D EFRE +V+ +KIVAC G
Sbjct: 61 ERLETFRCCDNVWTLILKDAEFREDQHSLKVDVVKIVACLG 101
>ASPGD|ASPL0000043754 [details] [associations]
symbol:AN2181 species:162425 "Emericella nidulans"
[GO:0005672 "transcription factor TFIIA complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0017025 "TBP-class protein
binding" evidence=IEA] [GO:0001129 "TBP-class protein binding RNA
polymerase II transcription factor activity involved in
preinitiation complex assembly" evidence=IEA] [GO:0051123 "RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] InterPro:IPR003194 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872
Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224
GO:GO:0006355 EMBL:BN001307 GO:GO:0006367 EMBL:AACD01000034
eggNOG:COG5123 HOGENOM:HOG000167251 KO:K03123 OMA:LTFKGHL
GO:GO:0005672 Gene3D:1.10.287.190 Gene3D:2.30.18.10
PANTHER:PTHR10966 SUPFAM:SSF50784 SUPFAM:SSF47396
RefSeq:XP_659785.1 ProteinModelPortal:Q5BB99 SMR:Q5BB99
STRING:Q5BB99 EnsemblFungi:CADANIAT00008864 GeneID:2875421
KEGG:ani:AN2181.2 OrthoDB:EOG4J40SP Uniprot:Q5BB99
Length = 111
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 51/101 (50%), Positives = 72/101 (71%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR ++LG +L ++LD+LI G I P LAMK+L FD+ I L KV++RLTFK G
Sbjct: 7 YELYRGSSLGLSLTDTLDDLINEGRIEPQLAMKILSTFDRVITEVLADKVRTRLTFK-GH 65
Query: 63 LNTYRFCDNVWTFVLTDVEFR-EVAEIARVNKLKIVACDGK 102
L+TYRFCD VWTF++ DV F+ + + +K+KIV+C+ K
Sbjct: 66 LDTYRFCDEVWTFLIKDVNFKLDNQQTISADKVKIVSCNSK 106
>WB|WBGene00015150 [details] [associations]
symbol:B0336.13 species:6239 "Caenorhabditis elegans"
[GO:0005672 "transcription factor TFIIA complex" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR003194 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR015871 InterPro:IPR015872
Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415 ProDom:PD009224
GO:GO:0006355 GO:GO:0006367 EMBL:FO080138 eggNOG:COG5123
HOGENOM:HOG000167251 KO:K03123 GO:GO:0005672 Gene3D:1.10.287.190
Gene3D:2.30.18.10 PANTHER:PTHR10966 SUPFAM:SSF50784 SUPFAM:SSF47396
GeneTree:ENSGT00390000014572 RefSeq:NP_498226.1
ProteinModelPortal:Q9BIB4 SMR:Q9BIB4 PaxDb:Q9BIB4
EnsemblMetazoa:B0336.13 GeneID:175791 KEGG:cel:CELE_B0336.13
UCSC:B0336.13 CTD:175791 WormBase:B0336.13 InParanoid:Q9BIB4
OMA:DAIFKNE NextBio:889686 Uniprot:Q9BIB4
Length = 139
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 47/105 (44%), Positives = 70/105 (66%)
Query: 2 SYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSG 61
SY LYR TTLG L ++L+++ G +T +LA KVL QFDKS+N + K ++ F +
Sbjct: 3 SYALYRGTTLGQALDKTLEDMESEGLLTKSLASKVLQQFDKSMNKQISRLPKEKMNFCAT 62
Query: 62 KLNTYRFCDNVWTFVLTDVEFREVAEI--ARVNKLKIVACDGKSS 104
+L TYR+CDNVWTF+L +V ++ ++KLK+VACDG+ +
Sbjct: 63 QLLTYRYCDNVWTFILNNVTLKDPQRSFDEPIDKLKVVACDGRQT 107
>SGD|S000001541 [details] [associations]
symbol:TOA2 "TFIIA small subunit" species:4932 "Saccharomyces
cerevisiae" [GO:0001132 "TBP-class protein binding RNA polymerase
II transcription factor activity" evidence=IDA] [GO:0017025
"TBP-class protein binding" evidence=IDA] [GO:0005672
"transcription factor TFIIA complex" evidence=IEA;IDA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA;IDA] [GO:0051123 "RNA polymerase II transcriptional
preinitiation complex assembly" evidence=IMP;IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001129 "TBP-class protein binding RNA polymerase II
transcription factor activity involved in preinitiation complex
assembly" evidence=IMP;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003194
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR015871
InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751 PIRSF:PIRSF009415
ProDom:PD009224 SGD:S000001541 GO:GO:0005737 GO:GO:0006355
EMBL:BK006944 EMBL:X75781 GO:GO:0051123 eggNOG:COG5123 KO:K03123
GO:GO:0005672 Gene3D:1.10.287.190 Gene3D:2.30.18.10
PANTHER:PTHR10966 SUPFAM:SSF50784 SUPFAM:SSF47396
GeneTree:ENSGT00390000014572 OMA:LIQTQQI OrthoDB:EOG4J40SP
EMBL:M85249 EMBL:Z28058 EMBL:AY557890 PIR:A41810 RefSeq:NP_012865.1
PDB:1NH2 PDB:1RM1 PDB:1YTF PDBsum:1NH2 PDBsum:1RM1 PDBsum:1YTF
DisProt:DP00009 ProteinModelPortal:P32774 SMR:P32774 DIP:DIP-2348N
IntAct:P32774 MINT:MINT-509274 STRING:P32774 PaxDb:P32774
PeptideAtlas:P32774 EnsemblFungi:YKL058W GeneID:853807
KEGG:sce:YKL058W CYGD:YKL058w EvolutionaryTrace:P32774
NextBio:974966 Genevestigator:P32774 GermOnline:YKL058W
Uniprot:P32774
Length = 122
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 50/117 (42%), Positives = 74/117 (63%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFKSGK 62
Y+LYR +T+GN+L ++LD LI G I +LAM+VL FDK + L +S+LT K G
Sbjct: 7 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDNTQSKLTVK-GN 65
Query: 63 LNTYRFCDNVWTFVLTD----VE--FREVAE--------IARVNKLKIVACDGKSSD 105
L+TY FCD+VWTF++ + VE R+ ++ + V+KL+IVAC+ K S+
Sbjct: 66 LDTYGFCDDVWTFIVKNCQVTVEDSHRDASQNGSGDSQSVISVDKLRIVACNSKKSE 122
>CGD|CAL0003642 [details] [associations]
symbol:TOA2 species:5476 "Candida albicans" [GO:0005672
"transcription factor TFIIA complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0001129 "TBP-class protein binding RNA polymerase
II transcription factor activity involved in preinitiation complex
assembly" evidence=IEA] [GO:0051123 "RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003194 InterPro:IPR009083 InterPro:IPR009088
InterPro:IPR015871 InterPro:IPR015872 Pfam:PF02268 Pfam:PF02751
PIRSF:PIRSF009415 ProDom:PD009224 CGD:CAL0003642 GO:GO:0006355
EMBL:AACQ01000005 EMBL:AACQ01000006 GO:GO:0006367 eggNOG:COG5123
KO:K03123 GO:GO:0005672 Gene3D:1.10.287.190 Gene3D:2.30.18.10
PANTHER:PTHR10966 SUPFAM:SSF50784 SUPFAM:SSF47396
RefSeq:XP_722697.1 RefSeq:XP_722843.1 ProteinModelPortal:Q5AMM1
SMR:Q5AMM1 STRING:Q5AMM1 GeneID:3635564 GeneID:3635710
KEGG:cal:CaO19.12095 KEGG:cal:CaO19.4625 Uniprot:Q5AMM1
Length = 130
Score = 184 (69.8 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 39/81 (48%), Positives = 56/81 (69%)
Query: 3 YQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKV---KSRLTFK 59
Y+LYR +T+G TL ++LD LI I P LA ++L+ FD+ I L ++ KS+L FK
Sbjct: 7 YELYRRSTIGVTLMDALDTLISDEKIQPQLANRILINFDRIIAENLKNENIVGKSKLIFK 66
Query: 60 SGKLNTYRFCDNVWTFVLTDV 80
G L+TYRFCD+VWTF++ +V
Sbjct: 67 -GDLDTYRFCDDVWTFIIKNV 86
Score = 41 (19.5 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 91 VNKLKIVACDGKSSDD 106
V+K KIVAC+ + + +
Sbjct: 114 VDKFKIVACNSRKAGE 129
>UNIPROTKB|A8MYR4 [details] [associations]
symbol:GTF2A2 "Transcription initiation factor IIA subunit
2" species:9606 "Homo sapiens" [GO:0005672 "transcription factor
TFIIA complex" evidence=IEA] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR003194
InterPro:IPR009083 InterPro:IPR015872 Pfam:PF02268 ProDom:PD009224
GO:GO:0006367 EMBL:AC092755 HOGENOM:HOG000167251 GO:GO:0005672
Gene3D:1.10.287.190 PANTHER:PTHR10966 SUPFAM:SSF47396
HGNC:HGNC:4647 HOVERGEN:HBG000826 IPI:IPI00793076
ProteinModelPortal:A8MYR4 SMR:A8MYR4 STRING:A8MYR4 PRIDE:A8MYR4
Ensembl:ENST00000396064 ArrayExpress:A8MYR4 Bgee:A8MYR4
Uniprot:A8MYR4
Length = 68
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 41/59 (69%), Positives = 51/59 (86%)
Query: 1 MSYQLYRNTTLGNTLQESLDELIQYGTITPTLAMKVLLQFDKSINGALPSKVKSRLTFK 59
M+YQLYRNTTLGN+LQESLDELIQ ITP LA++VLLQFDK+IN AL +V++R+ F+
Sbjct: 1 MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR 59
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 108 108 0.00091 102 3 11 22 0.43 30
29 0.40 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 551 (59 KB)
Total size of DFA: 109 KB (2073 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.70u 0.08s 10.78t Elapsed: 00:00:02
Total cpu time: 10.70u 0.08s 10.78t Elapsed: 00:00:02
Start: Thu Aug 15 11:40:43 2013 End: Thu Aug 15 11:40:45 2013