Query psy7896
Match_columns 718
No_of_seqs 522 out of 2883
Neff 5.4
Searched_HMMs 29240
Date Fri Aug 16 21:37:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7896.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7896hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n58_A Adenosylhomocysteinase; 100.0 4E-134 1E-138 1107.8 39.7 453 1-718 7-464 (464)
2 3h9u_A Adenosylhomocysteinase; 100.0 6E-127 2E-131 1052.0 40.3 425 1-718 5-436 (436)
3 3gvp_A Adenosylhomocysteinase 100.0 3E-124 1E-128 1028.2 38.8 419 1-714 16-435 (435)
4 3ond_A Adenosylhomocysteinase; 100.0 2E-117 6E-122 989.0 40.3 461 1-718 19-488 (488)
5 1v8b_A Adenosylhomocysteinase; 100.0 9E-100 3E-104 847.6 40.0 460 1-718 8-479 (479)
6 3ce6_A Adenosylhomocysteinase; 100.0 1.8E-96 6E-101 825.2 40.6 458 1-718 22-494 (494)
7 3d64_A Adenosylhomocysteinase; 100.0 3.4E-95 1.2E-99 813.3 40.7 453 1-718 37-494 (494)
8 3n58_A Adenosylhomocysteinase; 100.0 1.2E-44 4.2E-49 398.3 12.8 134 498-635 4-139 (464)
9 3ond_A Adenosylhomocysteinase; 100.0 2.1E-44 7.3E-49 401.6 13.2 134 497-634 15-150 (488)
10 3h9u_A Adenosylhomocysteinase; 100.0 5.5E-44 1.9E-48 393.3 12.5 133 498-634 2-137 (436)
11 3gvp_A Adenosylhomocysteinase 100.0 2.3E-43 7.7E-48 387.7 12.7 135 496-633 11-145 (435)
12 1v8b_A Adenosylhomocysteinase; 100.0 1.1E-42 3.7E-47 388.3 12.5 134 498-635 5-143 (479)
13 3ce6_A Adenosylhomocysteinase; 100.0 1.1E-42 3.9E-47 390.0 12.6 135 497-635 18-164 (494)
14 3d64_A Adenosylhomocysteinase; 100.0 2.2E-38 7.6E-43 354.7 12.8 135 497-635 33-169 (494)
15 3oet_A Erythronate-4-phosphate 99.9 5.6E-23 1.9E-27 223.9 18.1 259 269-568 62-377 (381)
16 3kb6_A D-lactate dehydrogenase 99.9 6.7E-23 2.3E-27 220.0 15.9 223 269-499 65-302 (334)
17 3k5p_A D-3-phosphoglycerate de 99.9 7.6E-23 2.6E-27 225.1 12.7 246 269-525 81-357 (416)
18 2o4c_A Erythronate-4-phosphate 99.9 7.2E-22 2.5E-26 215.3 17.9 261 268-566 58-379 (380)
19 4e5n_A Thermostable phosphite 99.9 8.5E-22 2.9E-26 211.0 16.6 227 268-499 67-300 (330)
20 4g2n_A D-isomer specific 2-hyd 99.9 1.6E-21 5.6E-26 210.1 18.5 218 268-499 94-319 (345)
21 1sc6_A PGDH, D-3-phosphoglycer 99.9 9.5E-22 3.2E-26 216.0 15.6 169 269-448 70-245 (404)
22 3jtm_A Formate dehydrogenase, 99.9 4.5E-21 1.6E-25 207.1 17.4 221 268-499 86-313 (351)
23 4hy3_A Phosphoglycerate oxidor 99.9 6.3E-21 2.2E-25 206.9 17.0 209 276-499 107-322 (365)
24 2yq5_A D-isomer specific 2-hyd 99.9 2.9E-21 1E-25 208.0 14.2 249 270-547 72-338 (343)
25 2pi1_A D-lactate dehydrogenase 99.8 5E-21 1.7E-25 205.5 15.3 223 269-499 65-302 (334)
26 3evt_A Phosphoglycerate dehydr 99.8 7.8E-21 2.7E-25 203.2 12.0 217 269-499 62-284 (324)
27 3gg9_A D-3-phosphoglycerate de 99.8 1.8E-20 6.1E-25 202.5 14.7 210 268-499 71-308 (352)
28 4dgs_A Dehydrogenase; structur 99.8 7.6E-20 2.6E-24 196.8 17.5 215 268-499 93-314 (340)
29 2g76_A 3-PGDH, D-3-phosphoglyc 99.8 1.7E-19 5.9E-24 193.6 17.7 208 268-499 89-311 (335)
30 2nac_A NAD-dependent formate d 99.8 1.8E-19 6E-24 197.3 17.5 212 268-499 113-340 (393)
31 2j6i_A Formate dehydrogenase; 99.8 2.2E-19 7.7E-24 194.7 16.4 221 268-499 84-319 (364)
32 1dxy_A D-2-hydroxyisocaproate 99.8 1.4E-19 4.9E-24 194.0 14.7 222 269-499 69-303 (333)
33 3hg7_A D-isomer specific 2-hyd 99.8 3.8E-20 1.3E-24 198.0 9.0 210 270-496 69-284 (324)
34 1wwk_A Phosphoglycerate dehydr 99.8 3.8E-19 1.3E-23 188.6 15.2 209 268-499 66-289 (307)
35 2ekl_A D-3-phosphoglycerate de 99.8 1.2E-18 4.3E-23 185.1 18.3 209 268-499 68-291 (313)
36 1xdw_A NAD+-dependent (R)-2-hy 99.8 3.7E-19 1.3E-23 190.5 14.3 219 269-499 70-305 (331)
37 1j4a_A D-LDH, D-lactate dehydr 99.8 6.2E-19 2.1E-23 188.9 15.1 215 269-499 71-305 (333)
38 1gdh_A D-glycerate dehydrogena 99.8 1.7E-18 5.8E-23 184.6 17.3 209 269-499 68-294 (320)
39 3pp8_A Glyoxylate/hydroxypyruv 99.8 2.8E-19 9.6E-24 190.5 9.4 194 288-496 83-283 (315)
40 1mx3_A CTBP1, C-terminal bindi 99.8 2.9E-18 9.9E-23 184.9 16.9 211 269-499 86-317 (347)
41 1ygy_A PGDH, D-3-phosphoglycer 99.8 1.4E-17 4.9E-22 188.5 19.6 171 269-447 67-243 (529)
42 2cuk_A Glycerate dehydrogenase 99.8 5.9E-18 2E-22 179.8 15.3 212 269-499 66-285 (311)
43 2w2k_A D-mandelate dehydrogena 99.7 9.6E-18 3.3E-22 180.7 16.3 219 269-499 81-312 (348)
44 1qp8_A Formate dehydrogenase; 99.7 7.4E-18 2.5E-22 178.5 10.7 207 269-495 51-264 (303)
45 3gvx_A Glycerate dehydrogenase 99.7 8E-18 2.8E-22 177.4 10.4 142 343-499 117-264 (290)
46 3ba1_A HPPR, hydroxyphenylpyru 99.7 2.4E-17 8.3E-22 176.8 13.6 205 268-499 87-307 (333)
47 2gcg_A Glyoxylate reductase/hy 99.7 6E-17 2.1E-21 173.1 16.3 176 268-448 76-258 (330)
48 2d0i_A Dehydrogenase; structur 99.7 4E-17 1.4E-21 174.9 14.5 173 268-447 64-246 (333)
49 2dbq_A Glyoxylate reductase; D 99.7 1.1E-16 3.8E-21 171.4 16.9 174 268-447 67-251 (334)
50 3d4o_A Dipicolinate synthase s 99.5 4.4E-14 1.5E-18 148.0 14.1 149 277-447 102-256 (293)
51 2rir_A Dipicolinate synthase, 99.5 2.3E-13 8E-18 142.8 15.9 154 269-444 99-255 (300)
52 1x13_A NAD(P) transhydrogenase 99.2 1.5E-10 5.2E-15 126.9 17.4 94 345-438 169-297 (401)
53 1l7d_A Nicotinamide nucleotide 99.2 3.6E-10 1.2E-14 122.9 18.5 94 344-437 168-298 (384)
54 3p2y_A Alanine dehydrogenase/p 99.1 1.6E-09 5.6E-14 118.0 17.7 156 280-436 116-303 (381)
55 2vhw_A Alanine dehydrogenase; 99.1 1E-09 3.5E-14 119.2 14.7 92 345-436 165-269 (377)
56 4dio_A NAD(P) transhydrogenase 99.1 4.3E-09 1.5E-13 115.6 18.9 150 280-436 122-313 (405)
57 1c1d_A L-phenylalanine dehydro 99.0 1.6E-09 5.5E-14 117.2 11.3 95 342-438 168-264 (355)
58 2eez_A Alanine dehydrogenase; 98.8 5.7E-08 2E-12 105.0 14.7 93 344-436 162-267 (369)
59 1gtm_A Glutamate dehydrogenase 98.7 2.8E-09 9.4E-14 117.7 2.9 96 342-446 205-306 (419)
60 1leh_A Leucine dehydrogenase; 98.5 1.6E-07 5.6E-12 101.9 8.9 94 343-438 167-263 (364)
61 3fr7_A Putative ketol-acid red 98.5 2.6E-07 8.9E-12 103.4 10.3 99 337-437 42-156 (525)
62 4a5o_A Bifunctional protein fo 98.5 4.6E-07 1.6E-11 95.2 11.4 81 341-437 154-235 (286)
63 3p2o_A Bifunctional protein fo 98.5 4.2E-07 1.4E-11 95.5 10.7 79 342-436 154-233 (285)
64 3l07_A Bifunctional protein fo 98.4 5.1E-07 1.7E-11 94.8 10.4 79 342-436 155-234 (285)
65 1b0a_A Protein (fold bifunctio 98.4 4.4E-07 1.5E-11 95.4 9.5 80 342-437 153-233 (288)
66 3oj0_A Glutr, glutamyl-tRNA re 98.4 3.8E-07 1.3E-11 84.9 8.1 88 347-437 20-112 (144)
67 1a4i_A Methylenetetrahydrofola 98.4 8.6E-07 2.9E-11 93.8 10.8 81 341-437 158-239 (301)
68 3ngx_A Bifunctional protein fo 98.4 6.9E-07 2.4E-11 93.4 9.6 75 346-436 148-223 (276)
69 2c2x_A Methylenetetrahydrofola 98.4 7.8E-07 2.7E-11 93.3 9.9 80 342-437 152-234 (281)
70 4a26_A Putative C-1-tetrahydro 98.4 6.8E-07 2.3E-11 94.5 9.6 79 342-436 159-240 (300)
71 1np3_A Ketol-acid reductoisome 98.4 4.1E-07 1.4E-11 97.2 7.0 91 345-435 13-107 (338)
72 3doj_A AT3G25530, dehydrogenas 98.3 1.2E-06 4E-11 92.1 9.6 96 343-438 16-118 (310)
73 1edz_A 5,10-methylenetetrahydr 98.3 6.6E-07 2.3E-11 95.5 7.6 93 342-437 171-277 (320)
74 1pjc_A Protein (L-alanine dehy 98.3 1.2E-06 4E-11 94.5 9.5 93 345-437 164-269 (361)
75 1gpj_A Glutamyl-tRNA reductase 98.3 1.1E-06 3.9E-11 96.0 9.5 92 345-436 164-267 (404)
76 3l6d_A Putative oxidoreductase 98.3 5E-07 1.7E-11 94.9 6.4 95 344-438 5-104 (306)
77 3pef_A 6-phosphogluconate dehy 98.3 1.6E-06 5.3E-11 89.8 9.3 90 349-438 2-98 (287)
78 4dll_A 2-hydroxy-3-oxopropiona 98.3 1.2E-06 4.3E-11 92.5 8.4 93 346-438 29-127 (320)
79 3dtt_A NADP oxidoreductase; st 98.3 1E-06 3.5E-11 89.5 7.2 101 336-437 7-126 (245)
80 3pdu_A 3-hydroxyisobutyrate de 98.2 1.3E-06 4.4E-11 90.4 7.3 90 349-438 2-98 (287)
81 2h78_A Hibadh, 3-hydroxyisobut 98.2 2E-06 6.9E-11 89.3 8.3 90 349-438 4-100 (302)
82 2d5c_A AROE, shikimate 5-dehyd 98.2 3.3E-06 1.1E-10 86.6 9.5 91 343-438 112-209 (263)
83 3g0o_A 3-hydroxyisobutyrate de 98.2 1.6E-06 5.6E-11 90.6 7.1 91 348-438 7-105 (303)
84 2yjz_A Metalloreductase steap4 97.5 1.9E-07 6.6E-12 92.8 0.0 89 346-438 17-108 (201)
85 2hk9_A Shikimate dehydrogenase 98.2 3.5E-06 1.2E-10 87.3 9.3 91 343-436 124-222 (275)
86 3qha_A Putative oxidoreductase 98.2 2.4E-06 8.1E-11 89.2 7.9 89 348-438 15-108 (296)
87 2vns_A Metalloreductase steap3 98.2 2E-06 7E-11 85.7 7.0 89 347-438 27-118 (215)
88 3ggo_A Prephenate dehydrogenas 98.2 2.8E-06 9.7E-11 89.9 8.3 93 346-438 31-131 (314)
89 4e21_A 6-phosphogluconate dehy 98.2 3.8E-06 1.3E-10 90.8 9.1 93 345-438 19-118 (358)
90 4ezb_A Uncharacterized conserv 98.1 3.1E-06 1.1E-10 89.5 8.1 89 349-438 25-124 (317)
91 2g5c_A Prephenate dehydrogenas 98.1 2.7E-06 9.3E-11 87.3 7.3 89 349-438 2-99 (281)
92 1vl6_A Malate oxidoreductase; 98.1 1.4E-05 4.7E-10 87.3 12.4 106 342-448 186-307 (388)
93 4gbj_A 6-phosphogluconate dehy 98.1 2.3E-06 7.9E-11 89.9 6.2 90 349-438 6-100 (297)
94 4e12_A Diketoreductase; oxidor 98.1 4.7E-05 1.6E-09 78.9 15.3 88 349-436 5-123 (283)
95 3obb_A Probable 3-hydroxyisobu 98.1 5.5E-06 1.9E-10 87.3 8.3 90 349-438 4-100 (300)
96 2pv7_A T-protein [includes: ch 98.1 2.8E-05 9.6E-10 81.3 13.3 78 348-438 21-102 (298)
97 3qsg_A NAD-binding phosphogluc 98.1 9.4E-06 3.2E-10 85.5 9.6 92 347-438 23-120 (312)
98 1vpd_A Tartronate semialdehyde 98.0 6.1E-06 2.1E-10 85.2 7.6 90 349-438 6-102 (299)
99 2gf2_A Hibadh, 3-hydroxyisobut 98.0 7.6E-06 2.6E-10 84.4 8.0 90 349-438 1-97 (296)
100 3d1l_A Putative NADP oxidoredu 98.0 2.9E-06 9.8E-11 86.5 4.7 96 343-438 5-105 (266)
101 2cvz_A Dehydrogenase, 3-hydrox 98.0 4.7E-06 1.6E-10 85.4 6.3 89 349-438 2-93 (289)
102 4b4u_A Bifunctional protein fo 98.0 1.6E-05 5.5E-10 84.1 10.1 80 341-436 172-252 (303)
103 3cky_A 2-hydroxymethyl glutara 98.0 1.1E-05 3.6E-10 83.5 8.1 90 349-438 5-101 (301)
104 2uyy_A N-PAC protein; long-cha 98.0 1.3E-05 4.3E-10 83.9 8.7 90 349-438 31-127 (316)
105 2f1k_A Prephenate dehydrogenas 98.0 1.1E-05 3.7E-10 82.6 7.5 88 349-438 1-94 (279)
106 1yb4_A Tartronic semialdehyde 97.9 1.3E-05 4.3E-10 82.6 7.8 89 349-438 4-99 (295)
107 3c24_A Putative oxidoreductase 97.9 7E-06 2.4E-10 84.8 5.5 88 349-437 12-103 (286)
108 3ktd_A Prephenate dehydrogenas 97.9 5.7E-06 1.9E-10 89.0 4.9 89 348-438 8-104 (341)
109 3b1f_A Putative prephenate deh 97.9 9E-06 3.1E-10 83.8 5.9 90 348-438 6-104 (290)
110 2ahr_A Putative pyrroline carb 97.9 2.2E-05 7.4E-10 79.6 8.5 87 349-437 4-92 (259)
111 2i99_A MU-crystallin homolog; 97.8 4.4E-05 1.5E-09 80.6 9.8 89 346-437 133-228 (312)
112 3gt0_A Pyrroline-5-carboxylate 97.8 3.1E-05 1E-09 78.4 8.0 89 349-437 3-99 (247)
113 3tri_A Pyrroline-5-carboxylate 97.8 6.3E-05 2.1E-09 78.1 9.5 90 348-437 3-100 (280)
114 1i36_A Conserved hypothetical 97.7 4.8E-05 1.6E-09 77.2 8.0 87 349-438 1-91 (264)
115 4gwg_A 6-phosphogluconate dehy 97.7 6.3E-05 2.2E-09 84.5 9.1 90 348-438 4-106 (484)
116 2zyd_A 6-phosphogluconate dehy 97.7 5.5E-05 1.9E-09 84.7 8.6 94 344-438 11-116 (480)
117 3ulk_A Ketol-acid reductoisome 97.7 7.5E-05 2.6E-09 82.6 9.1 91 345-437 34-133 (491)
118 2g1u_A Hypothetical protein TM 97.7 7.4E-05 2.5E-09 70.2 8.0 74 341-414 12-95 (155)
119 2a9f_A Putative malic enzyme ( 97.7 8.8E-05 3E-09 81.1 9.5 107 341-448 181-302 (398)
120 3don_A Shikimate dehydrogenase 97.6 7.4E-05 2.5E-09 78.1 7.8 92 344-439 113-214 (277)
121 2raf_A Putative dinucleotide-b 97.6 3.4E-05 1.2E-09 76.6 4.9 76 343-437 14-92 (209)
122 3c85_A Putative glutathione-re 97.6 5.4E-05 1.9E-09 72.7 5.5 92 343-434 34-138 (183)
123 2izz_A Pyrroline-5-carboxylate 97.6 0.0001 3.5E-09 77.8 8.0 92 346-437 20-120 (322)
124 1zej_A HBD-9, 3-hydroxyacyl-CO 97.6 4.6E-05 1.6E-09 80.3 5.3 88 347-437 11-110 (293)
125 1nyt_A Shikimate 5-dehydrogena 97.6 0.00018 6.2E-09 74.2 9.5 94 343-439 114-218 (271)
126 2egg_A AROE, shikimate 5-dehyd 97.6 0.00016 5.6E-09 75.9 9.3 91 344-437 137-242 (297)
127 2qrj_A Saccharopine dehydrogen 97.6 8E-05 2.7E-09 81.5 6.9 80 347-436 213-301 (394)
128 2dpo_A L-gulonate 3-dehydrogen 97.6 0.0001 3.4E-09 78.5 7.5 98 348-448 6-133 (319)
129 1bg6_A N-(1-D-carboxylethyl)-L 97.6 0.00014 4.9E-09 76.5 8.6 86 349-434 5-108 (359)
130 1yqg_A Pyrroline-5-carboxylate 97.5 6.3E-05 2.2E-09 76.1 5.3 86 349-437 1-90 (263)
131 2p4q_A 6-phosphogluconate dehy 97.5 0.00014 4.7E-09 81.9 8.5 90 348-438 10-112 (497)
132 4gcm_A TRXR, thioredoxin reduc 97.5 0.00021 7.3E-09 73.5 9.3 38 344-381 141-178 (312)
133 2q3e_A UDP-glucose 6-dehydroge 97.5 0.00029 9.8E-09 78.4 10.2 89 349-437 6-133 (467)
134 3hdj_A Probable ornithine cycl 97.5 0.00052 1.8E-08 72.8 11.7 100 347-449 120-230 (313)
135 2pgd_A 6-phosphogluconate dehy 97.5 0.00018 6.2E-09 80.4 8.5 89 349-438 3-104 (482)
136 2vdc_G Glutamate synthase [NAD 97.5 0.0003 1E-08 78.0 10.0 115 267-381 120-298 (456)
137 2iz1_A 6-phosphogluconate dehy 97.5 0.00016 5.5E-09 80.7 7.9 89 349-438 6-106 (474)
138 1txg_A Glycerol-3-phosphate de 97.5 0.00018 6E-09 75.2 7.6 88 349-437 1-106 (335)
139 2hmt_A YUAA protein; RCK, KTN, 97.5 0.00014 4.9E-09 65.7 6.0 83 346-428 4-98 (144)
140 3gg2_A Sugar dehydrogenase, UD 97.5 0.00026 9E-09 78.6 9.4 89 349-437 3-124 (450)
141 3fwz_A Inner membrane protein 97.5 0.0002 7E-09 66.2 7.2 102 348-451 7-119 (140)
142 3pid_A UDP-glucose 6-dehydroge 97.4 0.00016 5.6E-09 80.1 7.6 95 341-437 29-155 (432)
143 1f0y_A HCDH, L-3-hydroxyacyl-C 97.4 0.0002 6.9E-09 74.5 7.9 88 349-436 16-138 (302)
144 1jay_A Coenzyme F420H2:NADP+ o 97.4 0.00011 3.8E-09 71.9 5.6 86 349-437 1-99 (212)
145 2rcy_A Pyrroline carboxylate r 97.4 0.00018 6.3E-09 72.7 7.2 82 348-437 4-94 (262)
146 3o8q_A Shikimate 5-dehydrogena 97.4 0.00021 7.3E-09 74.7 7.6 93 343-438 121-224 (281)
147 3ic5_A Putative saccharopine d 97.4 0.00031 1.1E-08 61.4 7.4 66 347-412 4-78 (118)
148 1p77_A Shikimate 5-dehydrogena 97.4 0.0002 6.9E-09 74.0 7.0 70 344-413 115-190 (272)
149 3llv_A Exopolyphosphatase-rela 97.4 0.00031 1.1E-08 64.3 7.6 67 347-413 5-80 (141)
150 2ew2_A 2-dehydropantoate 2-red 97.4 0.00017 5.7E-09 74.3 6.2 89 349-437 4-110 (316)
151 1mv8_A GMD, GDP-mannose 6-dehy 97.4 0.00033 1.1E-08 77.1 8.6 89 349-437 1-125 (436)
152 1pgj_A 6PGDH, 6-PGDH, 6-phosph 97.3 0.00023 7.7E-09 79.6 7.3 89 349-438 2-106 (478)
153 1x7d_A Ornithine cyclodeaminas 97.3 0.00078 2.7E-08 72.5 10.7 99 347-448 128-242 (350)
154 1lss_A TRK system potassium up 97.3 0.00053 1.8E-08 61.7 8.1 85 348-432 4-100 (140)
155 4a5l_A Thioredoxin reductase; 97.3 0.00059 2E-08 69.7 9.3 36 346-381 150-185 (314)
156 3k96_A Glycerol-3-phosphate de 97.3 0.0003 1E-08 75.9 6.8 91 347-437 28-135 (356)
157 1yqd_A Sinapyl alcohol dehydro 97.3 0.00052 1.8E-08 73.5 8.4 91 347-438 187-285 (366)
158 3phh_A Shikimate dehydrogenase 97.3 0.00035 1.2E-08 72.8 6.9 90 348-438 118-212 (269)
159 1omo_A Alanine dehydrogenase; 97.2 0.0014 4.7E-08 69.6 11.5 98 347-448 124-233 (322)
160 4huj_A Uncharacterized protein 97.2 0.00059 2E-08 68.0 7.9 87 349-437 24-115 (220)
161 1z82_A Glycerol-3-phosphate de 97.2 0.00059 2E-08 72.0 8.2 87 348-437 14-113 (335)
162 3fbt_A Chorismate mutase and s 97.2 0.001 3.5E-08 69.7 9.9 90 343-437 117-216 (282)
163 2ef0_A Ornithine carbamoyltran 97.2 0.0082 2.8E-07 63.5 16.5 170 250-448 85-276 (301)
164 3tnl_A Shikimate dehydrogenase 97.2 0.0015 5.1E-08 69.5 10.9 95 343-438 149-266 (315)
165 2dvm_A Malic enzyme, 439AA lon 97.2 0.0013 4.6E-08 72.9 10.8 106 343-448 181-309 (439)
166 1x0v_A GPD-C, GPDH-C, glycerol 97.2 0.00054 1.8E-08 72.4 7.2 90 348-437 8-126 (354)
167 3pwz_A Shikimate dehydrogenase 97.1 0.00062 2.1E-08 70.9 7.4 93 343-438 115-218 (272)
168 1nvt_A Shikimate 5'-dehydrogen 97.1 0.00052 1.8E-08 71.3 6.6 94 343-437 123-232 (287)
169 2i6u_A Otcase, ornithine carba 97.1 0.0082 2.8E-07 63.7 15.7 170 250-448 79-280 (307)
170 1id1_A Putative potassium chan 97.1 0.001 3.4E-08 62.1 7.9 87 347-433 2-103 (153)
171 2y0c_A BCEC, UDP-glucose dehyd 97.1 0.00083 2.9E-08 75.1 8.3 89 348-436 8-129 (478)
172 1dlj_A UDP-glucose dehydrogena 97.1 0.00072 2.5E-08 73.8 7.7 86 349-436 1-118 (402)
173 1pvv_A Otcase, ornithine carba 97.1 0.011 3.7E-07 63.0 16.5 171 249-448 85-286 (315)
174 1ks9_A KPA reductase;, 2-dehyd 97.1 0.00061 2.1E-08 69.3 6.6 89 349-437 1-99 (291)
175 3u62_A Shikimate dehydrogenase 97.1 0.0013 4.4E-08 67.7 9.0 89 345-437 106-202 (253)
176 3jyo_A Quinate/shikimate dehyd 97.1 0.0011 3.7E-08 69.4 8.4 93 343-438 122-232 (283)
177 4a7p_A UDP-glucose dehydrogena 97.1 0.0017 5.8E-08 72.2 10.4 90 348-437 8-131 (446)
178 1vlv_A Otcase, ornithine carba 97.1 0.0089 3E-07 63.9 15.6 185 229-448 83-300 (325)
179 3dfz_A SIRC, precorrin-2 dehyd 97.1 0.0006 2E-08 69.2 6.1 92 343-436 26-122 (223)
180 1dxh_A Ornithine carbamoyltran 97.0 0.01 3.4E-07 63.8 15.7 175 229-437 70-276 (335)
181 1pg5_A Aspartate carbamoyltran 97.0 0.0088 3E-07 63.3 14.9 185 229-447 63-272 (299)
182 3g79_A NDP-N-acetyl-D-galactos 97.0 0.0021 7.1E-08 72.1 10.5 90 348-437 18-149 (478)
183 3t4e_A Quinate/shikimate dehyd 97.0 0.0019 6.6E-08 68.5 9.6 94 343-437 143-259 (312)
184 3aog_A Glutamate dehydrogenase 97.0 0.0022 7.6E-08 71.1 10.3 84 342-426 229-332 (440)
185 2cdc_A Glucose dehydrogenase g 97.0 0.00051 1.7E-08 73.3 5.0 94 345-438 178-281 (366)
186 1evy_A Glycerol-3-phosphate de 97.0 0.00025 8.4E-09 75.7 2.5 88 350-437 17-126 (366)
187 1duv_G Octase-1, ornithine tra 97.0 0.01 3.4E-07 63.7 14.9 175 229-437 69-276 (333)
188 3csu_A Protein (aspartate carb 97.0 0.014 4.8E-07 62.0 15.8 188 228-448 65-280 (310)
189 1piw_A Hypothetical zinc-type 96.9 0.0014 4.7E-08 69.8 8.1 91 347-438 179-279 (360)
190 3mog_A Probable 3-hydroxybutyr 96.9 0.00076 2.6E-08 75.7 6.2 89 348-437 5-123 (483)
191 3two_A Mannitol dehydrogenase; 96.9 0.001 3.5E-08 70.3 6.9 92 346-438 175-268 (348)
192 3k6j_A Protein F01G10.3, confi 96.9 0.0011 3.6E-08 74.1 7.2 87 349-436 55-168 (460)
193 2i76_A Hypothetical protein; N 96.9 0.00023 7.7E-09 73.4 1.5 86 349-437 3-91 (276)
194 3k92_A NAD-GDH, NAD-specific g 96.9 0.002 7E-08 71.1 9.1 94 342-437 215-327 (424)
195 1yj8_A Glycerol-3-phosphate de 96.9 0.00076 2.6E-08 72.4 5.2 87 349-437 22-143 (375)
196 1uuf_A YAHK, zinc-type alcohol 96.8 0.0014 4.8E-08 70.3 7.0 91 347-438 194-291 (369)
197 3l9w_A Glutathione-regulated p 96.8 0.001 3.5E-08 73.2 5.8 102 348-451 4-116 (413)
198 3ojo_A CAP5O; rossmann fold, c 96.8 0.0043 1.5E-07 68.7 10.8 91 346-437 9-131 (431)
199 2tmg_A Protein (glutamate dehy 96.8 0.0047 1.6E-07 68.1 11.0 84 342-426 203-307 (415)
200 2dc1_A L-aspartate dehydrogena 96.8 0.0014 4.8E-08 65.9 6.4 81 349-437 1-83 (236)
201 4fcc_A Glutamate dehydrogenase 96.8 0.0022 7.5E-08 71.3 8.3 96 342-438 229-353 (450)
202 3r7f_A Aspartate carbamoyltran 96.8 0.012 4E-07 62.4 13.5 167 249-445 75-262 (304)
203 2o3j_A UDP-glucose 6-dehydroge 96.8 0.0016 5.6E-08 72.7 7.3 88 349-436 10-136 (481)
204 3dfu_A Uncharacterized protein 96.8 0.003 1E-07 64.5 8.6 68 348-435 6-75 (232)
205 2qyt_A 2-dehydropantoate 2-red 96.8 0.001 3.4E-08 68.8 5.0 86 349-437 9-119 (317)
206 2cf5_A Atccad5, CAD, cinnamyl 96.7 0.0018 6E-08 69.0 6.8 91 347-438 180-278 (357)
207 1ml4_A Aspartate transcarbamoy 96.7 0.021 7.3E-07 60.5 14.8 185 229-447 69-280 (308)
208 1v9l_A Glutamate dehydrogenase 96.7 0.0026 8.8E-08 70.3 8.0 84 342-427 204-314 (421)
209 2w37_A Ornithine carbamoyltran 96.7 0.021 7.2E-07 61.8 14.8 175 228-437 91-297 (359)
210 3fg2_P Putative rubredoxin red 96.7 0.0031 1.1E-07 67.9 8.2 36 347-382 141-176 (404)
211 1e3i_A Alcohol dehydrogenase, 96.7 0.0037 1.3E-07 66.8 8.6 91 346-437 194-299 (376)
212 1cdo_A Alcohol dehydrogenase; 96.6 0.0038 1.3E-07 66.6 8.7 91 346-437 191-296 (374)
213 2aef_A Calcium-gated potassium 96.6 0.0017 5.7E-08 64.8 5.5 101 348-452 9-120 (234)
214 3l4b_C TRKA K+ channel protien 96.6 0.0017 5.8E-08 64.1 5.3 100 349-450 1-112 (218)
215 2yfq_A Padgh, NAD-GDH, NAD-spe 96.6 0.0023 7.7E-08 70.8 6.7 94 342-437 206-324 (421)
216 1p0f_A NADP-dependent alcohol 96.6 0.0036 1.2E-07 66.8 8.2 91 346-437 190-295 (373)
217 4amu_A Ornithine carbamoyltran 96.6 0.045 1.6E-06 59.3 16.7 161 248-437 109-302 (365)
218 3aoe_E Glutamate dehydrogenase 96.6 0.0046 1.6E-07 68.3 9.0 95 342-438 212-322 (419)
219 2jhf_A Alcohol dehydrogenase E 96.6 0.004 1.4E-07 66.5 8.4 91 346-437 190-295 (374)
220 3q2o_A Phosphoribosylaminoimid 96.6 0.0036 1.2E-07 67.3 8.0 69 344-412 10-84 (389)
221 1rjw_A ADH-HT, alcohol dehydro 96.6 0.0021 7.1E-08 67.8 5.9 91 347-438 164-264 (339)
222 1zcj_A Peroxisomal bifunctiona 96.6 0.0026 9E-08 70.7 6.9 85 348-433 37-148 (463)
223 3tpf_A Otcase, ornithine carba 96.5 0.037 1.3E-06 58.7 15.2 185 229-448 61-277 (307)
224 1iz0_A Quinone oxidoreductase; 96.5 0.0027 9.1E-08 65.7 6.4 88 347-437 125-220 (302)
225 3uog_A Alcohol dehydrogenase; 96.5 0.0032 1.1E-07 67.1 7.2 90 346-437 188-289 (363)
226 3hwr_A 2-dehydropantoate 2-red 96.5 0.0038 1.3E-07 65.7 7.5 89 345-437 16-122 (318)
227 3itj_A Thioredoxin reductase 1 96.5 0.0079 2.7E-07 61.5 9.7 38 345-382 170-207 (338)
228 2bma_A Glutamate dehydrogenase 96.5 0.0028 9.7E-08 70.7 6.7 91 342-433 246-365 (470)
229 1pqw_A Polyketide synthase; ro 96.5 0.0022 7.6E-08 61.9 5.1 90 346-437 37-139 (198)
230 2fzw_A Alcohol dehydrogenase c 96.5 0.004 1.4E-07 66.4 7.5 91 346-437 189-294 (373)
231 3uko_A Alcohol dehydrogenase c 96.5 0.0034 1.2E-07 67.2 7.0 91 346-437 192-297 (378)
232 1o94_A Tmadh, trimethylamine d 96.5 0.01 3.6E-07 69.3 11.7 115 267-381 387-563 (729)
233 3s2e_A Zinc-containing alcohol 96.5 0.0025 8.6E-08 67.1 5.9 92 346-438 165-266 (340)
234 1xhc_A NADH oxidase /nitrite r 96.5 0.0033 1.1E-07 67.2 6.9 114 268-382 7-177 (367)
235 1e3j_A NADP(H)-dependent ketos 96.5 0.0041 1.4E-07 65.8 7.4 91 346-437 167-273 (352)
236 4ej6_A Putative zinc-binding d 96.5 0.0024 8.1E-08 68.5 5.5 91 346-437 181-286 (370)
237 1pl8_A Human sorbitol dehydrog 96.4 0.0041 1.4E-07 66.0 7.2 91 346-437 170-275 (356)
238 4ep1_A Otcase, ornithine carba 96.4 0.054 1.8E-06 58.2 15.7 171 249-448 109-309 (340)
239 3i83_A 2-dehydropantoate 2-red 96.4 0.0078 2.7E-07 63.2 9.2 87 349-437 3-107 (320)
240 4f2g_A Otcase 1, ornithine car 96.4 0.041 1.4E-06 58.4 14.5 185 229-448 70-279 (309)
241 2d8a_A PH0655, probable L-thre 96.4 0.002 7E-08 68.1 4.5 91 347-438 167-270 (348)
242 4eye_A Probable oxidoreductase 96.4 0.0043 1.5E-07 65.6 7.0 90 346-437 158-259 (342)
243 3ghy_A Ketopantoate reductase 96.4 0.0035 1.2E-07 66.2 6.2 86 348-437 3-106 (335)
244 3kd9_A Coenzyme A disulfide re 96.4 0.0059 2E-07 66.6 8.1 36 347-382 147-182 (449)
245 3r3j_A Glutamate dehydrogenase 96.3 0.0039 1.3E-07 69.3 6.6 83 342-425 233-343 (456)
246 1wdk_A Fatty oxidation complex 96.3 0.0028 9.6E-08 74.3 5.7 88 348-436 314-431 (715)
247 3fbg_A Putative arginate lyase 96.3 0.0028 9.6E-08 67.0 5.2 99 347-446 150-259 (346)
248 3gd5_A Otcase, ornithine carba 96.3 0.071 2.4E-06 56.9 15.9 171 249-448 87-288 (323)
249 2z2v_A Hypothetical protein PH 96.3 0.0035 1.2E-07 67.7 6.0 92 344-437 12-110 (365)
250 3sds_A Ornithine carbamoyltran 96.3 0.087 3E-06 56.9 16.5 182 249-447 105-321 (353)
251 1pzg_A LDH, lactate dehydrogen 96.3 0.011 3.9E-07 62.8 9.5 65 348-412 9-87 (331)
252 1gte_A Dihydropyrimidine dehyd 96.3 0.0089 3E-07 72.7 9.8 35 268-302 186-221 (1025)
253 1oth_A Protein (ornithine tran 96.3 0.054 1.8E-06 57.8 14.6 184 229-447 71-284 (321)
254 3fpc_A NADP-dependent alcohol 96.3 0.0033 1.1E-07 66.5 5.3 91 346-437 165-268 (352)
255 3ip1_A Alcohol dehydrogenase, 96.3 0.0055 1.9E-07 66.3 7.1 94 345-438 211-321 (404)
256 1f8f_A Benzyl alcohol dehydrog 96.3 0.0029 1E-07 67.4 4.8 91 346-437 189-291 (371)
257 2hcy_A Alcohol dehydrogenase 1 96.3 0.0047 1.6E-07 65.2 6.4 91 347-438 169-272 (347)
258 1kol_A Formaldehyde dehydrogen 96.2 0.006 2.1E-07 65.6 7.1 92 346-437 184-302 (398)
259 3goh_A Alcohol dehydrogenase, 96.2 0.0029 1E-07 65.8 4.5 89 346-437 141-231 (315)
260 3fbs_A Oxidoreductase; structu 96.2 0.014 4.7E-07 58.6 9.3 38 344-382 137-174 (297)
261 2dph_A Formaldehyde dismutase; 96.2 0.0043 1.5E-07 67.0 5.9 92 346-437 184-301 (398)
262 1pjq_A CYSG, siroheme synthase 96.2 0.0031 1.1E-07 70.0 4.9 91 344-435 8-103 (457)
263 3c7a_A Octopine dehydrogenase; 96.2 0.0061 2.1E-07 65.8 6.9 84 349-434 3-115 (404)
264 3ado_A Lambda-crystallin; L-gu 96.2 0.0077 2.6E-07 64.2 7.5 98 348-448 6-133 (319)
265 4hkt_A Inositol 2-dehydrogenas 96.2 0.0069 2.4E-07 63.5 7.1 65 349-413 4-73 (331)
266 1v3u_A Leukotriene B4 12- hydr 96.2 0.0049 1.7E-07 64.6 5.9 90 346-437 144-246 (333)
267 3grf_A Ornithine carbamoyltran 96.2 0.077 2.6E-06 56.8 15.1 178 249-448 84-298 (328)
268 3orq_A N5-carboxyaminoimidazol 96.1 0.0084 2.9E-07 64.4 7.7 68 344-411 8-81 (377)
269 3lxd_A FAD-dependent pyridine 96.1 0.01 3.4E-07 64.0 8.4 35 348-382 152-186 (415)
270 2yfk_A Aspartate/ornithine car 96.1 0.092 3.2E-06 57.9 16.0 186 229-447 85-351 (418)
271 3k30_A Histamine dehydrogenase 96.1 0.02 6.7E-07 66.4 11.3 116 267-382 389-559 (690)
272 4eqs_A Coenzyme A disulfide re 96.1 0.01 3.4E-07 65.0 8.3 34 348-381 147-180 (437)
273 3hn2_A 2-dehydropantoate 2-red 96.1 0.011 3.9E-07 61.7 8.4 86 349-437 3-105 (312)
274 1hyh_A L-hicdh, L-2-hydroxyiso 96.1 0.01 3.5E-07 62.1 8.0 64 349-413 2-79 (309)
275 3d1c_A Flavin-containing putat 96.1 0.018 6.2E-07 59.9 9.9 36 346-381 164-199 (369)
276 3tum_A Shikimate dehydrogenase 96.1 0.022 7.4E-07 59.3 10.3 95 343-437 120-227 (269)
277 1a5z_A L-lactate dehydrogenase 96.1 0.011 3.9E-07 62.3 8.2 88 349-437 1-118 (319)
278 4a8p_A Putrescine carbamoyltra 96.1 0.1 3.6E-06 56.3 15.7 171 249-448 80-285 (355)
279 1bgv_A Glutamate dehydrogenase 96.1 0.0044 1.5E-07 68.9 5.2 91 342-433 224-343 (449)
280 3e8x_A Putative NAD-dependent 96.1 0.014 4.6E-07 57.6 8.2 41 344-384 17-58 (236)
281 3cty_A Thioredoxin reductase; 96.0 0.023 8E-07 58.2 10.2 36 346-381 153-188 (319)
282 3oc4_A Oxidoreductase, pyridin 96.0 0.013 4.3E-07 64.1 8.6 35 347-381 146-180 (452)
283 3q98_A Transcarbamylase; rossm 96.0 0.17 5.8E-06 55.5 17.4 161 249-436 102-335 (399)
284 4dup_A Quinone oxidoreductase; 96.0 0.0061 2.1E-07 64.7 5.9 90 346-437 166-267 (353)
285 3gwf_A Cyclohexanone monooxyge 96.0 0.018 6.2E-07 65.1 10.0 38 345-382 175-212 (540)
286 4b7c_A Probable oxidoreductase 96.0 0.0053 1.8E-07 64.4 5.3 90 346-437 148-250 (336)
287 2wtb_A MFP2, fatty acid multif 96.0 0.0061 2.1E-07 71.6 6.3 87 349-436 313-429 (725)
288 3ntd_A FAD-dependent pyridine 96.0 0.011 3.7E-07 66.2 8.1 36 347-382 150-185 (565)
289 3r9u_A Thioredoxin reductase; 96.0 0.021 7.2E-07 57.7 9.5 38 345-382 144-181 (315)
290 2vn8_A Reticulon-4-interacting 96.0 0.017 5.7E-07 61.8 9.0 91 346-437 182-282 (375)
291 3ef6_A Toluene 1,2-dioxygenase 96.0 0.0099 3.4E-07 64.2 7.3 36 347-382 142-177 (410)
292 2c0c_A Zinc binding alcohol de 96.0 0.0058 2E-07 65.2 5.4 90 346-437 162-263 (362)
293 3urh_A Dihydrolipoyl dehydroge 96.0 0.019 6.4E-07 63.5 9.6 35 347-381 197-231 (491)
294 1kyq_A Met8P, siroheme biosynt 96.0 0.0027 9.4E-08 66.3 2.7 40 343-382 8-47 (274)
295 1jw9_B Molybdopterin biosynthe 96.0 0.0081 2.8E-07 61.3 6.2 37 345-381 28-65 (249)
296 3uox_A Otemo; baeyer-villiger 96.0 0.019 6.4E-07 65.0 9.8 39 344-382 181-219 (545)
297 3gms_A Putative NADPH:quinone 96.0 0.006 2.1E-07 64.2 5.4 90 346-437 143-245 (340)
298 3nv9_A Malic enzyme; rossmann 95.9 0.031 1.1E-06 62.2 11.1 107 342-448 213-340 (487)
299 3jyn_A Quinone oxidoreductase; 95.9 0.0066 2.3E-07 63.5 5.4 90 346-437 139-241 (325)
300 3f8d_A Thioredoxin reductase ( 95.9 0.032 1.1E-06 56.5 10.3 39 344-382 150-188 (323)
301 2dq4_A L-threonine 3-dehydroge 95.9 0.005 1.7E-07 64.9 4.5 90 347-437 164-264 (343)
302 2j3h_A NADP-dependent oxidored 95.9 0.0053 1.8E-07 64.5 4.6 90 346-437 154-257 (345)
303 3qwb_A Probable quinone oxidor 95.9 0.0077 2.6E-07 63.1 5.8 90 346-437 147-249 (334)
304 2h6e_A ADH-4, D-arabinose 1-de 95.9 0.0044 1.5E-07 65.4 3.9 90 347-437 170-271 (344)
305 4h31_A Otcase, ornithine carba 95.9 0.094 3.2E-06 56.7 14.3 176 229-437 95-302 (358)
306 2qae_A Lipoamide, dihydrolipoy 95.9 0.034 1.2E-06 60.9 11.0 36 347-382 173-208 (468)
307 1vj0_A Alcohol dehydrogenase, 95.8 0.0077 2.6E-07 64.6 5.8 91 347-438 195-301 (380)
308 1guz_A Malate dehydrogenase; o 95.8 0.027 9.3E-07 59.1 9.8 64 349-413 1-79 (310)
309 2eih_A Alcohol dehydrogenase; 95.8 0.011 3.7E-07 62.3 6.8 89 347-437 166-267 (343)
310 3pi7_A NADH oxidoreductase; gr 95.8 0.012 4.2E-07 62.1 7.1 88 348-437 165-265 (349)
311 1lu9_A Methylene tetrahydromet 95.8 0.029 1E-06 57.8 9.8 41 343-383 114-155 (287)
312 2v3a_A Rubredoxin reductase; a 95.8 0.035 1.2E-06 59.1 10.6 34 348-381 145-178 (384)
313 1lld_A L-lactate dehydrogenase 95.8 0.024 8.2E-07 59.0 9.1 91 347-437 6-126 (319)
314 2b5w_A Glucose dehydrogenase; 95.8 0.0067 2.3E-07 64.4 4.9 88 348-437 173-275 (357)
315 3ics_A Coenzyme A-disulfide re 95.8 0.014 4.7E-07 66.1 7.7 35 347-381 186-220 (588)
316 4a8t_A Putrescine carbamoyltra 95.8 0.12 4.2E-06 55.5 14.6 185 229-448 88-307 (339)
317 3o0h_A Glutathione reductase; 95.8 0.044 1.5E-06 60.4 11.6 35 347-381 190-224 (484)
318 3m6i_A L-arabinitol 4-dehydrog 95.8 0.01 3.5E-07 62.9 6.3 92 346-438 178-286 (363)
319 3e18_A Oxidoreductase; dehydro 95.8 0.013 4.6E-07 62.4 7.2 67 348-414 5-76 (359)
320 1js1_X Transcarbamylase; alpha 95.8 0.13 4.6E-06 54.8 14.7 169 251-448 89-290 (324)
321 2rir_A Dipicolinate synthase, 95.8 0.29 1E-05 50.7 17.2 102 346-453 5-122 (300)
322 1cjc_A Protein (adrenodoxin re 95.8 0.026 8.8E-07 62.4 9.6 35 269-303 6-42 (460)
323 2q0l_A TRXR, thioredoxin reduc 95.7 0.041 1.4E-06 55.9 10.4 37 346-382 141-177 (311)
324 3ic9_A Dihydrolipoamide dehydr 95.7 0.038 1.3E-06 61.3 10.9 36 347-382 173-208 (492)
325 4ekn_B Aspartate carbamoyltran 95.7 0.084 2.9E-06 56.0 12.9 180 229-444 65-272 (306)
326 3euw_A MYO-inositol dehydrogen 95.7 0.016 5.4E-07 61.1 7.4 66 349-414 5-76 (344)
327 2v6b_A L-LDH, L-lactate dehydr 95.7 0.011 3.6E-07 62.2 6.0 88 349-437 1-118 (304)
328 1mo9_A ORF3; nucleotide bindin 95.7 0.03 1E-06 62.6 10.0 35 347-381 213-247 (523)
329 3slk_A Polyketide synthase ext 95.7 0.27 9.4E-06 58.2 18.6 90 345-438 343-445 (795)
330 3dk9_A Grase, GR, glutathione 95.7 0.047 1.6E-06 60.0 11.4 34 348-381 187-220 (478)
331 3klj_A NAD(FAD)-dependent dehy 95.7 0.0076 2.6E-07 65.0 5.0 115 268-382 8-180 (385)
332 2pi1_A D-lactate dehydrogenase 95.7 0.021 7.3E-07 61.0 8.3 77 228-304 85-176 (334)
333 2axq_A Saccharopine dehydrogen 95.7 0.011 3.6E-07 66.1 6.2 94 341-436 16-120 (467)
334 4g65_A TRK system potassium up 95.7 0.0081 2.8E-07 66.8 5.2 66 348-413 3-78 (461)
335 3lzw_A Ferredoxin--NADP reduct 95.7 0.032 1.1E-06 56.8 9.2 38 345-382 151-188 (332)
336 1zmd_A Dihydrolipoyl dehydroge 95.7 0.046 1.6E-06 60.0 11.1 35 347-381 177-211 (474)
337 3ego_A Probable 2-dehydropanto 95.7 0.01 3.6E-07 62.0 5.7 85 349-437 3-101 (307)
338 4ap3_A Steroid monooxygenase; 95.7 0.027 9.3E-07 63.7 9.5 39 344-382 187-225 (549)
339 3l8k_A Dihydrolipoyl dehydroge 95.6 0.03 1E-06 61.4 9.5 35 347-381 171-205 (466)
340 2a8x_A Dihydrolipoyl dehydroge 95.6 0.046 1.6E-06 59.8 10.9 35 347-381 170-204 (464)
341 1ges_A Glutathione reductase; 95.6 0.044 1.5E-06 59.9 10.7 36 347-382 166-201 (450)
342 2hjr_A Malate dehydrogenase; m 95.6 0.041 1.4E-06 58.5 10.1 87 349-436 15-132 (328)
343 2j8z_A Quinone oxidoreductase; 95.6 0.011 3.8E-07 62.7 5.8 90 346-437 161-263 (354)
344 1qor_A Quinone oxidoreductase; 95.6 0.01 3.6E-07 61.9 5.4 89 347-437 140-241 (327)
345 2ho3_A Oxidoreductase, GFO/IDH 95.6 0.021 7E-07 59.7 7.6 84 349-433 2-92 (325)
346 3db2_A Putative NADPH-dependen 95.6 0.017 5.7E-07 61.2 7.0 66 349-414 6-77 (354)
347 1wly_A CAAR, 2-haloacrylate re 95.6 0.013 4.5E-07 61.3 6.1 90 346-437 144-246 (333)
348 4e5n_A Thermostable phosphite 95.6 0.018 6E-07 61.5 7.1 75 229-303 89-179 (330)
349 1q1r_A Putidaredoxin reductase 95.6 0.019 6.7E-07 62.5 7.6 35 347-381 148-182 (431)
350 1oju_A MDH, malate dehydrogena 95.5 0.04 1.4E-06 57.9 9.6 87 349-436 1-119 (294)
351 3q2i_A Dehydrogenase; rossmann 95.5 0.018 6.2E-07 61.0 7.1 67 348-414 13-86 (354)
352 3tqh_A Quinone oxidoreductase; 95.5 0.0072 2.5E-07 63.1 3.9 90 346-438 151-248 (321)
353 3iwa_A FAD-dependent pyridine 95.5 0.024 8.2E-07 62.2 8.2 34 348-381 159-193 (472)
354 1ldn_A L-lactate dehydrogenase 95.5 0.014 4.9E-07 61.5 6.0 89 348-436 6-124 (316)
355 3cea_A MYO-inositol 2-dehydrog 95.5 0.018 6.2E-07 60.4 6.8 83 349-432 9-100 (346)
356 2zbw_A Thioredoxin reductase; 95.5 0.042 1.4E-06 56.4 9.4 37 346-382 150-186 (335)
357 1dxl_A Dihydrolipoamide dehydr 95.5 0.032 1.1E-06 61.0 9.0 36 347-382 176-211 (470)
358 3uuw_A Putative oxidoreductase 95.5 0.019 6.5E-07 59.5 6.8 67 348-414 6-77 (308)
359 1trb_A Thioredoxin reductase; 95.5 0.051 1.7E-06 55.3 9.9 35 347-381 144-178 (320)
360 3mw9_A GDH 1, glutamate dehydr 95.5 0.028 9.6E-07 63.1 8.5 90 345-437 241-350 (501)
361 3ezy_A Dehydrogenase; structur 95.5 0.017 5.8E-07 60.9 6.5 66 349-414 3-75 (344)
362 3lad_A Dihydrolipoamide dehydr 95.5 0.054 1.9E-06 59.3 10.7 35 347-381 179-213 (476)
363 3lk7_A UDP-N-acetylmuramoylala 95.4 0.019 6.4E-07 63.4 6.9 68 345-412 6-81 (451)
364 2r9z_A Glutathione amide reduc 95.4 0.065 2.2E-06 58.9 11.2 35 347-381 165-199 (463)
365 1jvb_A NAD(H)-dependent alcoho 95.4 0.011 3.7E-07 62.5 4.7 91 346-437 169-273 (347)
366 1ff9_A Saccharopine reductase; 95.4 0.018 6.3E-07 63.8 6.8 67 347-413 2-78 (450)
367 4a0s_A Octenoyl-COA reductase/ 95.4 0.016 5.5E-07 63.4 6.2 90 346-437 219-338 (447)
368 3e9m_A Oxidoreductase, GFO/IDH 95.4 0.016 5.5E-07 60.9 6.0 67 348-414 5-78 (330)
369 2yqu_A 2-oxoglutarate dehydrog 95.4 0.063 2.1E-06 58.6 10.8 36 347-382 166-201 (455)
370 1lvl_A Dihydrolipoamide dehydr 95.4 0.027 9.1E-07 61.8 7.8 36 347-382 170-205 (458)
371 3jv7_A ADH-A; dehydrogenase, n 95.3 0.012 4.1E-07 62.0 4.8 91 346-437 170-272 (345)
372 2ewd_A Lactate dehydrogenase,; 95.3 0.031 1.1E-06 58.7 8.0 89 348-437 4-123 (317)
373 1t2d_A LDH-P, L-lactate dehydr 95.3 0.029 1E-06 59.5 7.8 63 349-412 5-81 (322)
374 4fk1_A Putative thioredoxin re 95.3 0.019 6.6E-07 58.8 6.2 39 344-382 142-181 (304)
375 3gqv_A Enoyl reductase; medium 95.3 0.04 1.4E-06 58.8 8.9 90 346-437 163-265 (371)
376 4a9w_A Monooxygenase; baeyer-v 95.3 0.055 1.9E-06 55.4 9.7 34 270-303 4-37 (357)
377 1zq6_A Otcase, ornithine carba 95.3 0.29 9.9E-06 52.9 15.5 170 250-448 110-330 (359)
378 1zk7_A HGII, reductase, mercur 95.3 0.058 2E-06 59.0 10.3 35 347-381 175-209 (467)
379 3e82_A Putative oxidoreductase 95.2 0.027 9.4E-07 60.1 7.3 64 349-413 8-77 (364)
380 3gvi_A Malate dehydrogenase; N 95.2 0.056 1.9E-06 57.5 9.7 90 346-436 5-125 (324)
381 1y81_A Conserved hypothetical 95.2 0.022 7.7E-07 53.1 5.8 85 346-437 12-104 (138)
382 2glx_A 1,5-anhydro-D-fructose 95.2 0.026 9E-07 58.8 7.0 83 350-433 2-92 (332)
383 2zb4_A Prostaglandin reductase 95.2 0.016 5.6E-07 61.2 5.4 89 347-437 158-262 (357)
384 4dna_A Probable glutathione re 95.2 0.084 2.9E-06 57.8 11.2 35 347-381 169-203 (463)
385 3fpz_A Thiazole biosynthetic e 95.2 0.005 1.7E-07 64.2 1.2 111 268-378 64-213 (326)
386 3r6d_A NAD-dependent epimerase 95.2 0.015 5.2E-07 56.6 4.7 88 349-436 6-108 (221)
387 3d0o_A L-LDH 1, L-lactate dehy 95.2 0.039 1.3E-06 58.2 8.1 90 347-436 5-124 (317)
388 2cdu_A NADPH oxidase; flavoenz 95.2 0.032 1.1E-06 60.9 7.6 35 347-381 148-182 (452)
389 3pqe_A L-LDH, L-lactate dehydr 95.2 0.028 9.6E-07 59.9 7.0 91 347-437 4-124 (326)
390 1yb5_A Quinone oxidoreductase; 95.1 0.017 5.9E-07 61.3 5.3 90 346-437 169-271 (351)
391 3ec7_A Putative dehydrogenase; 95.1 0.035 1.2E-06 59.1 7.7 67 347-413 22-97 (357)
392 3vku_A L-LDH, L-lactate dehydr 95.1 0.016 5.6E-07 61.8 5.1 91 346-436 7-126 (326)
393 3oig_A Enoyl-[acyl-carrier-pro 95.1 0.46 1.6E-05 47.5 15.5 39 344-382 3-44 (266)
394 3c1a_A Putative oxidoreductase 95.1 0.015 5E-07 60.7 4.5 84 349-433 11-99 (315)
395 2eq6_A Pyruvate dehydrogenase 95.1 0.095 3.3E-06 57.5 11.2 35 347-381 168-202 (464)
396 3kux_A Putative oxidoreductase 95.1 0.033 1.1E-06 59.0 7.2 82 349-432 8-96 (352)
397 4a2c_A Galactitol-1-phosphate 95.1 0.034 1.2E-06 58.2 7.2 93 345-438 158-263 (346)
398 1ur5_A Malate dehydrogenase; o 95.0 0.048 1.6E-06 57.3 8.4 87 349-436 3-120 (309)
399 3evn_A Oxidoreductase, GFO/IDH 95.0 0.027 9.2E-07 59.1 6.4 66 348-413 5-77 (329)
400 3g17_A Similar to 2-dehydropan 95.0 0.0055 1.9E-07 63.5 1.1 87 349-437 3-98 (294)
401 3nep_X Malate dehydrogenase; h 95.0 0.053 1.8E-06 57.5 8.7 89 349-437 1-120 (314)
402 4e4t_A Phosphoribosylaminoimid 95.0 0.038 1.3E-06 60.4 7.8 67 345-411 32-104 (419)
403 3kkj_A Amine oxidase, flavin-c 95.0 0.01 3.4E-07 55.8 2.7 33 271-303 4-36 (336)
404 1xea_A Oxidoreductase, GFO/IDH 95.0 0.022 7.6E-07 59.5 5.6 84 349-433 3-93 (323)
405 1gu7_A Enoyl-[acyl-carrier-pro 95.0 0.025 8.4E-07 59.9 6.0 89 347-437 166-277 (364)
406 3mz0_A Inositol 2-dehydrogenas 95.0 0.033 1.1E-06 58.7 6.9 65 349-413 3-76 (344)
407 1ez4_A Lactate dehydrogenase; 95.0 0.031 1.1E-06 59.2 6.6 88 349-436 6-122 (318)
408 1lqt_A FPRA; NADP+ derivative, 95.0 0.049 1.7E-06 60.1 8.5 35 269-303 3-44 (456)
409 1y6j_A L-lactate dehydrogenase 94.9 0.066 2.3E-06 56.6 9.1 89 348-436 7-124 (318)
410 1lnq_A MTHK channels, potassiu 94.9 0.025 8.6E-07 59.4 5.9 100 348-451 115-225 (336)
411 3rc1_A Sugar 3-ketoreductase; 94.9 0.034 1.2E-06 59.1 6.9 68 347-414 26-100 (350)
412 1hdo_A Biliverdin IX beta redu 94.9 0.043 1.5E-06 52.0 6.9 66 348-413 3-77 (206)
413 4dvj_A Putative zinc-dependent 94.9 0.027 9.3E-07 60.1 6.0 89 347-436 171-271 (363)
414 3kb6_A D-lactate dehydrogenase 94.8 0.058 2E-06 57.6 8.4 76 228-303 85-175 (334)
415 2yq5_A D-isomer specific 2-hyd 94.8 0.042 1.4E-06 59.1 7.3 39 266-304 145-183 (343)
416 3vtf_A UDP-glucose 6-dehydroge 94.8 0.045 1.5E-06 60.9 7.7 66 348-413 21-107 (444)
417 1ps9_A 2,4-dienoyl-COA reducta 94.8 0.042 1.4E-06 63.4 7.8 109 268-376 372-522 (671)
418 3d6n_B Aspartate carbamoyltran 94.8 0.11 3.8E-06 54.6 10.3 132 250-410 74-212 (291)
419 1npy_A Hypothetical shikimate 94.8 0.028 9.7E-07 58.3 5.7 65 347-413 118-185 (271)
420 4b1b_A TRXR, thioredoxin reduc 94.8 0.045 1.6E-06 62.1 7.8 35 348-382 223-257 (542)
421 3krt_A Crotonyl COA reductase; 94.8 0.017 5.6E-07 63.7 4.1 90 346-437 227-346 (456)
422 3gaz_A Alcohol dehydrogenase s 94.8 0.036 1.2E-06 58.5 6.6 90 346-438 149-249 (343)
423 3bio_A Oxidoreductase, GFO/IDH 94.8 0.027 9.2E-07 59.0 5.4 80 349-433 10-94 (304)
424 4a7p_A UDP-glucose dehydrogena 94.7 0.097 3.3E-06 58.1 10.1 103 342-450 316-434 (446)
425 1tlt_A Putative oxidoreductase 94.7 0.061 2.1E-06 56.0 8.0 84 349-433 6-95 (319)
426 3gdo_A Uncharacterized oxidore 94.7 0.038 1.3E-06 58.8 6.5 64 349-413 6-75 (358)
427 1zud_1 Adenylyltransferase THI 94.7 0.024 8.1E-07 58.0 4.7 37 345-381 25-62 (251)
428 3m2t_A Probable dehydrogenase; 94.7 0.041 1.4E-06 58.7 6.7 66 348-413 5-78 (359)
429 2zqz_A L-LDH, L-lactate dehydr 94.7 0.037 1.3E-06 58.9 6.3 90 347-436 8-126 (326)
430 3ldh_A Lactate dehydrogenase; 94.7 0.042 1.4E-06 58.8 6.7 90 347-437 20-140 (330)
431 3eag_A UDP-N-acetylmuramate:L- 94.6 0.071 2.4E-06 56.2 8.4 65 348-412 4-75 (326)
432 1fec_A Trypanothione reductase 94.6 0.083 2.8E-06 58.5 9.2 36 347-382 186-224 (490)
433 1xa0_A Putative NADPH dependen 94.5 0.037 1.3E-06 57.7 5.9 88 348-437 149-248 (328)
434 3k31_A Enoyl-(acyl-carrier-pro 94.5 0.08 2.8E-06 54.6 8.2 39 344-382 26-67 (296)
435 3fwz_A Inner membrane protein 94.4 0.038 1.3E-06 50.8 5.0 39 269-307 7-45 (140)
436 3jtm_A Formate dehydrogenase, 94.4 0.5 1.7E-05 50.8 14.5 84 362-455 31-114 (351)
437 3nx4_A Putative oxidoreductase 94.4 0.022 7.4E-07 59.3 3.7 87 348-437 148-243 (324)
438 3fhl_A Putative oxidoreductase 94.4 0.038 1.3E-06 58.8 5.6 64 349-413 6-75 (362)
439 1h2b_A Alcohol dehydrogenase; 94.4 0.034 1.1E-06 59.1 5.1 89 346-437 185-287 (359)
440 1f06_A MESO-diaminopimelate D- 94.4 0.039 1.3E-06 58.2 5.6 81 349-433 4-87 (320)
441 1ydw_A AX110P-like protein; st 94.3 0.056 1.9E-06 57.3 6.8 83 349-432 7-100 (362)
442 2x5o_A UDP-N-acetylmuramoylala 94.3 0.043 1.5E-06 60.2 6.1 67 345-412 2-73 (439)
443 4had_A Probable oxidoreductase 94.3 0.06 2.1E-06 56.6 6.9 65 349-413 24-96 (350)
444 1hyu_A AHPF, alkyl hydroperoxi 94.3 0.11 3.7E-06 58.2 9.3 37 346-382 353-389 (521)
445 3dgh_A TRXR-1, thioredoxin red 94.3 0.19 6.4E-06 55.3 11.0 34 347-380 186-219 (483)
446 3ijr_A Oxidoreductase, short c 94.2 0.14 4.7E-06 52.8 9.3 39 344-382 43-82 (291)
447 3ohs_X Trans-1,2-dihydrobenzen 94.2 0.058 2E-06 56.6 6.6 66 349-414 3-77 (334)
448 1mld_A Malate dehydrogenase; o 94.2 0.13 4.4E-06 54.2 9.2 64 349-412 1-77 (314)
449 3abi_A Putative uncharacterize 94.2 0.068 2.3E-06 57.0 7.2 66 347-413 15-87 (365)
450 3p7m_A Malate dehydrogenase; p 94.2 0.089 3.1E-06 55.9 7.9 90 347-436 4-123 (321)
451 2xxj_A L-LDH, L-lactate dehydr 94.2 0.085 2.9E-06 55.6 7.7 88 349-436 1-117 (310)
452 2h7i_A Enoyl-[acyl-carrier-pro 94.2 0.046 1.6E-06 55.3 5.5 39 345-383 4-45 (269)
453 3fi9_A Malate dehydrogenase; s 94.1 0.046 1.6E-06 58.7 5.6 68 346-413 6-86 (343)
454 4gx0_A TRKA domain protein; me 94.1 0.041 1.4E-06 62.1 5.4 102 349-452 349-457 (565)
455 2wpf_A Trypanothione reductase 94.1 0.15 5.2E-06 56.5 9.9 36 347-382 190-228 (495)
456 2bka_A CC3, TAT-interacting pr 94.0 0.066 2.3E-06 52.5 6.1 37 346-382 16-55 (242)
457 3qfa_A Thioredoxin reductase 1 94.0 0.17 5.9E-06 56.4 10.1 34 347-380 209-242 (519)
458 1smk_A Malate dehydrogenase, g 94.0 0.12 4E-06 54.9 8.3 65 348-412 8-85 (326)
459 3tl2_A Malate dehydrogenase; c 93.9 0.092 3.2E-06 55.6 7.4 91 346-436 6-128 (315)
460 3c85_A Putative glutathione-re 93.9 0.055 1.9E-06 51.5 5.1 39 267-305 37-76 (183)
461 2czc_A Glyceraldehyde-3-phosph 93.9 0.1 3.5E-06 55.5 7.7 65 349-413 3-89 (334)
462 2x8g_A Thioredoxin glutathione 93.9 0.17 5.7E-06 57.4 9.9 34 347-380 285-318 (598)
463 1zsy_A Mitochondrial 2-enoyl t 93.9 0.075 2.6E-06 56.3 6.6 89 346-436 166-271 (357)
464 1tt7_A YHFP; alcohol dehydroge 93.9 0.046 1.6E-06 57.1 4.8 89 347-437 149-249 (330)
465 1xdi_A RV3303C-LPDA; reductase 93.8 0.18 6.1E-06 55.8 9.8 36 347-382 181-216 (499)
466 3ew7_A LMO0794 protein; Q8Y8U8 93.8 0.1 3.4E-06 50.1 6.8 64 349-413 1-71 (221)
467 1b7g_O Protein (glyceraldehyde 93.8 0.11 3.6E-06 55.7 7.6 85 349-435 2-108 (340)
468 2vt3_A REX, redox-sensing tran 93.8 0.054 1.8E-06 54.5 5.0 65 348-413 85-155 (215)
469 3h2s_A Putative NADH-flavin re 93.7 0.091 3.1E-06 50.8 6.5 65 349-413 1-72 (224)
470 4fb5_A Probable oxidoreductase 93.7 0.097 3.3E-06 55.2 7.1 68 346-413 23-104 (393)
471 3k5i_A Phosphoribosyl-aminoimi 93.7 0.12 4E-06 56.1 8.0 85 341-429 17-109 (403)
472 3llv_A Exopolyphosphatase-rela 93.6 0.072 2.5E-06 48.4 5.2 38 268-305 5-42 (141)
473 2duw_A Putative COA-binding pr 93.5 0.038 1.3E-06 51.8 3.2 85 348-437 13-105 (145)
474 3qvo_A NMRA family protein; st 93.5 0.071 2.4E-06 52.7 5.3 68 346-413 21-98 (236)
475 3dgz_A Thioredoxin reductase 2 93.5 0.22 7.6E-06 54.8 9.8 35 347-381 184-218 (488)
476 2p2s_A Putative oxidoreductase 93.4 0.16 5.4E-06 53.2 8.1 84 349-433 5-96 (336)
477 2gag_A Heterotetrameric sarcos 93.4 0.12 4.1E-06 62.5 8.1 37 346-382 282-318 (965)
478 4a27_A Synaptic vesicle membra 93.4 0.085 2.9E-06 55.7 6.0 88 346-437 141-240 (349)
479 3grk_A Enoyl-(acyl-carrier-pro 93.4 0.17 5.9E-06 52.1 8.1 38 344-381 27-67 (293)
480 3upl_A Oxidoreductase; rossman 93.2 0.08 2.8E-06 58.8 5.7 66 349-414 24-118 (446)
481 2nu8_A Succinyl-COA ligase [AD 93.2 1.2 4.2E-05 46.2 14.4 65 348-414 7-75 (288)
482 1c1d_A L-phenylalanine dehydro 93.1 0.068 2.3E-06 57.8 4.8 55 249-304 155-210 (355)
483 1h6d_A Precursor form of gluco 93.1 0.065 2.2E-06 58.8 4.8 85 348-433 83-180 (433)
484 3ius_A Uncharacterized conserv 93.1 0.1 3.5E-06 52.5 5.8 65 348-412 5-72 (286)
485 2d4a_B Malate dehydrogenase; a 93.0 0.11 3.7E-06 54.8 6.0 86 350-436 1-117 (308)
486 3dhn_A NAD-dependent epimerase 93.0 0.09 3.1E-06 51.0 5.1 63 349-412 5-76 (227)
487 4eez_A Alcohol dehydrogenase 1 93.0 0.098 3.4E-06 54.7 5.7 91 346-437 162-265 (348)
488 3d4o_A Dipicolinate synthase s 93.0 0.075 2.6E-06 55.1 4.7 76 229-305 116-191 (293)
489 3v2g_A 3-oxoacyl-[acyl-carrier 92.9 0.28 9.7E-06 49.9 8.9 39 343-381 26-65 (271)
490 2q2v_A Beta-D-hydroxybutyrate 92.9 0.22 7.6E-06 49.7 8.0 37 346-382 2-39 (255)
491 3o9z_A Lipopolysaccaride biosy 92.9 0.23 7.8E-06 52.0 8.4 65 349-413 4-82 (312)
492 4ina_A Saccharopine dehydrogen 92.9 0.13 4.4E-06 56.0 6.6 65 349-413 2-86 (405)
493 1ml4_A Aspartate transcarbamoy 92.8 1.7 5.8E-05 46.0 14.8 162 344-592 40-210 (308)
494 3is3_A 17BETA-hydroxysteroid d 92.8 0.31 1E-05 49.3 8.9 41 341-381 11-52 (270)
495 3i23_A Oxidoreductase, GFO/IDH 92.8 0.14 4.7E-06 54.2 6.5 65 349-413 3-75 (349)
496 3fef_A Putative glucosidase LP 92.8 0.15 5.3E-06 56.6 7.1 64 347-411 4-83 (450)
497 2ixa_A Alpha-N-acetylgalactosa 92.7 0.15 5.2E-06 55.8 7.0 81 348-429 20-116 (444)
498 1g0o_A Trihydroxynaphthalene r 92.7 0.24 8.1E-06 50.4 8.0 39 344-382 25-64 (283)
499 3pxx_A Carveol dehydrogenase; 92.7 0.19 6.7E-06 50.7 7.3 36 345-380 7-43 (287)
500 3kkj_A Amine oxidase, flavin-c 92.7 0.093 3.2E-06 49.1 4.5 33 350-382 4-36 (336)
No 1
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=3.8e-134 Score=1107.76 Aligned_cols=453 Identities=59% Similarity=0.907 Sum_probs=417.0
Q ss_pred CCCccchHhhhhhHHHHHhhCchHHHHHHHhccCCCCCCcEEEEEeeccHhHHHHHHHHHHCCCEEEEeecCCCCCHHHH
Q psy7896 1 MADIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVLIETLLELGAEVQWSSCNIFSTQDHA 80 (718)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~mp~l~~~~~~~~~~~pl~g~ri~~~lh~~~~ta~l~~~L~~~Ga~v~~~~~n~~stqd~~ 80 (718)
|+||+||+|||++|+||++|||+||++|++|+++|||||+||++|+|||+|||+|+|||+++||||+|||||||||||||
T Consensus 7 v~d~~la~~G~~~i~~ae~~MP~L~~~r~~~~~~kPl~G~rI~~~lH~t~~TavlietL~a~GAev~~~~cN~~STqd~~ 86 (464)
T 3n58_A 7 VKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHA 86 (464)
T ss_dssp ESCGGGHHHHHHHHHHHHTTCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTCCCHHH
T ss_pred ccCchhHHHHHHHHHHHHhhCHHHHHHHHHHhccCCCCCCEEEEEEecHHHHHHHHHHHHHcCCeEEEecCCCCCCcHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCeEEEecCCCHHHHHHHHHHHccCCCCCCceeEecCcchhHHHHHhhC-----hhhhhcccCCCcccchhHH
Q psy7896 81 AAAIAARGVAVYAWKGETDEEYVWCIEQTLVFPDGKPLNMILDDGGDLTNLVHEKY-----PQFLSEIRGISEETTTGVH 155 (718)
Q Consensus 81 aaal~~~gv~v~a~~~~~~~ey~~~~~~~~~~~~~~~~~~i~Ddggdl~~~~~~~~-----~~~~~~~~g~~eet~~g~~ 155 (718)
||||++.|||||||||||++|||||++++|+|+++.+||||+||||||++++|+.. +.+++.- +..-.+
T Consensus 87 aaal~~~gi~v~A~kget~eey~~~~~~~l~~~~~~~p~~ilDDGgDl~~~~h~~~~~~~~~~~~~~~------~~~~~~ 160 (464)
T 3n58_A 87 AAAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDGEPSNMILDDGGDATMYILIGARAEAGEDVLSNP------QSEEEE 160 (464)
T ss_dssp HHHHHHTTCCEEECTTCCHHHHHHHHHHTTCCTTSCCCSEEEESSSHHHHHHHHHHHHHTTCCCSSSC------CSHHHH
T ss_pred HHHHHhcCCeEEEeCCCCHHHHHHHHHHHHcccCCCCCCEEEECchHHHHHHHhhhhhhcccccCCCC------CcHHHH
Confidence 99999999999999999999999999999999888778999999999999999432 1111111 111222
Q ss_pred hHHHHHhhcccCCCccccCCCCCccceeeecccccccccccccccccccccccccccchhhhhhhHHHHhcCCccceEEE
Q psy7896 156 NLYKMFKENKLGVPAINVNDSVTKPLNMILDDGGDLTNLVHEKYPQFLSEIRGISEETTTGVHNLYKMFKENKLGVPAIN 235 (718)
Q Consensus 156 ~~~~~~~~~~l~~p~~~~~~s~~k~~~~~~d~ggyf~~~~~~~~~~~~~~~~Gv~E~T~sG~~rl~~~~~~g~l~~Pv~~ 235 (718)
-|++.++.. ....+++|+++.+++.|++|+|+|||||||+|+++|.|.|||+|
T Consensus 161 ~~~~~~~~~---------------------------~~~~~~~~~~~~~~i~G~~EeTtTGv~rL~~m~~~g~L~~Pvin 213 (464)
T 3n58_A 161 VLFAQIKKR---------------------------MAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAIN 213 (464)
T ss_dssp HHHHHHHHH---------------------------HHHSTTHHHHHHHHCCEEEECSHHHHHHHHHHHHHTCCCSCEEE
T ss_pred HHHHHHHHH---------------------------hhcCcchhHHHHhhccceeeccccchHHHHHHHHcCCCCCCEEe
Confidence 334444322 22344678889999999999999999999999999999999999
Q ss_pred ecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhh
Q psy7896 236 VNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEL 315 (718)
Q Consensus 236 v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L 315 (718)
||||++|++|||+|||+||+++++.|+++
T Consensus 214 Vnds~tK~~fDn~yG~~eslvdgI~Ratg--------------------------------------------------- 242 (464)
T 3n58_A 214 VNDSVTKSKFDNKYGCKESLVDGIRRGTD--------------------------------------------------- 242 (464)
T ss_dssp CTTSHHHHTTHHHHHHHHHHHHHHHHHHC---------------------------------------------------
T ss_pred eccHhhhhhhhhhhcchHHHHHHHHHhcC---------------------------------------------------
Confidence 99999999999999999999999998644
Q ss_pred hHHHHHHHHHHhcccccccchhhhhhhcccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec
Q psy7896 316 DEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT 395 (718)
Q Consensus 316 ~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~ 395 (718)
.++.||||+|+|+|+||+.+|++|++|||+|+++|++|.++.++.++|++++
T Consensus 243 ----------------------------~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv 294 (464)
T 3n58_A 243 ----------------------------VMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVV 294 (464)
T ss_dssp ----------------------------CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC
T ss_pred ----------------------------CcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceec
Confidence 4577899999999999999999999999999999999988888888999999
Q ss_pred CHHHHhccCcEEEEcCCCCCCcCHHHHhcCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccCccccchhhHHHH
Q psy7896 396 TMEEAAKEGGIFVTTTGCKDIIRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTEALL 475 (718)
Q Consensus 396 ~Leell~~aDiIi~atgt~~lI~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e~~~~~eal~ 475 (718)
++++++++||||+++++|+++|++++|++||+|++|||+|||+.|+|.++|.+ ..+.+++|+|
T Consensus 295 ~LeElL~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgdvEID~~aL~~--~~~~~ik~~v--------------- 357 (464)
T 3n58_A 295 TLDDAASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN--LKWTNVKPQV--------------- 357 (464)
T ss_dssp CHHHHGGGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSSTTTBTCGGGTT--SEEEEEETTE---------------
T ss_pred cHHHHHhhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCCcccCHHHHHh--CccccccCCe---------------
Confidence 99999999999999999999999999999999999999999999999999986 5778899999
Q ss_pred hhhcccccccccccccCCcccccccccchhhcccchhhhHHHHhcChHHHHHHHHhcccccCCceEEEeeecchhhHHHH
Q psy7896 476 ATCNSLFKYSLVNTIHEAPTLLVHLSTDIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVL 555 (718)
Q Consensus 476 n~~~~~~~~nlv~~~h~~a~~~~Y~i~D~~La~~G~~kI~wa~~~MP~L~~Lr~~f~~~kpl~G~~i~~~lh~~~~Ta~L 555 (718)
T Consensus 358 -------------------------------------------------------------------------------- 357 (464)
T 3n58_A 358 -------------------------------------------------------------------------------- 357 (464)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHcCCeEEeeccCcCCchHHHHHHHHhcCceEEEeeCCChHHHHHHHHHHhhcceecCCCCeEEEecCCccccccc
Q psy7896 556 IETLLELGAEVQWSSCNIFSTQDHAAAAIAARGVAVYAWKGETDEEYVWCIEQTLVDRYTLPNGNHIILLAEGRLVNLGC 635 (718)
Q Consensus 556 ~~~l~~~GA~v~~~~~nplstqd~vaaal~~~gi~v~a~~ge~~eey~~~~~~~l~~~~~~~~~~~~i~ddggdl~~~~~ 635 (718)
+.++++||..||+...|+||||+|
T Consensus 358 --------------------------------------------------------~~~~~~~g~~i~lLaeGrlvNL~~ 381 (464)
T 3n58_A 358 --------------------------------------------------------DLIEFPDGKRLILLSEGRLLNLGN 381 (464)
T ss_dssp --------------------------------------------------------EEEECTTSCEEEEEGGGSBHHHHH
T ss_pred --------------------------------------------------------eEEEeCCCCEEEEEeCCceecccC
Confidence 555689999999999999999999
Q ss_pred cCCCCcceechhHHhHHHHHHHHHhccCCCCCceeeCChhhHHHHHHHhhhhcCcccccCCHHHHhhcCCCCCCCCCCCC
Q psy7896 636 AMGHPSFVMSNSFTNQVLAQIELWTKHSQYPVGVYMLPKKLDEEVAALHLEHLGVKLTKLTEDQAKYLGLPIEGPYKPDH 715 (718)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (718)
++||||||||+||+||+|||+|||+++++|++|||.|||+|||+||++||++||++||+||++|++|||+|.+|||||||
T Consensus 382 a~GhP~~vm~~sf~~Q~la~~~l~~~~~~~~~~v~~lP~~lDe~VA~l~L~~~g~~l~~lt~~Q~~yl~~~~~gp~k~~~ 461 (464)
T 3n58_A 382 ATGHPSFVMSASFTNQVLGQIELFTRTDAYKNEVYVLPKHLDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEH 461 (464)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHHHHHSGGGCCSSEECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHHTCCTTSCCSCTT
T ss_pred CCCChHHHHhHHHHHHHHHHHHHHhCccccCCCeeECCHHHHHHHHHHHHHHcCCEeccCCHHHHHHcCCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q psy7896 716 YRY 718 (718)
Q Consensus 716 ~~~ 718 (718)
|||
T Consensus 462 yry 464 (464)
T 3n58_A 462 YRY 464 (464)
T ss_dssp CCC
T ss_pred CCC
Confidence 999
No 2
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=100.00 E-value=5.5e-127 Score=1051.95 Aligned_cols=425 Identities=73% Similarity=1.182 Sum_probs=402.7
Q ss_pred CCCccchHhhhhhHHHHHhhCchHHHHHHHhccCCCCCCcEEEEEeeccHhHHHHHHHHHHCCCEEEEeecCCCCCHHHH
Q psy7896 1 MADIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVLIETLLELGAEVQWSSCNIFSTQDHA 80 (718)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~mp~l~~~~~~~~~~~pl~g~ri~~~lh~~~~ta~l~~~L~~~Ga~v~~~~~n~~stqd~~ 80 (718)
|+||+||+|||++|+||++|||+||++|++|+++|||||+||++|+|||+|||+|++||+++||||+|||||||||||||
T Consensus 5 v~d~~la~~g~~~i~~a~~~mp~l~~~r~~~~~~~pl~g~ri~~~lh~~~~Ta~l~~tL~~~GA~v~~~~~n~~stqd~~ 84 (436)
T 3h9u_A 5 VRDISLAEWGRRELELAENEMPGLMELRREYGPSKPLKGAKIAGCLHMTMQTAVLIETLVELGAEVRWASCNIFSTQDHA 84 (436)
T ss_dssp ESCGGGHHHHHHHHHHHHHHCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTTCCHHH
T ss_pred ccChhhhHhhhHHHHHHHhhCHHHHHHHHHHhccCCCCCCEEEEEeccHHHHHHHHHHHHHcCCEEEEecCCCCCCcHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCeEEEecCCCHHHHHHHHHHHc-cCCCCCCceeEecCcchhHHHHHhhChhhhhcccCCCcccchhHHhHHH
Q psy7896 81 AAAIAARGVAVYAWKGETDEEYVWCIEQTL-VFPDGKPLNMILDDGGDLTNLVHEKYPQFLSEIRGISEETTTGVHNLYK 159 (718)
Q Consensus 81 aaal~~~gv~v~a~~~~~~~ey~~~~~~~~-~~~~~~~~~~i~Ddggdl~~~~~~~~~~~~~~~~g~~eet~~g~~~~~~ 159 (718)
||||++.|||||||||||++|||||++++| +|+++.+||||+||||||++++|++||+++++|+|++||||||
T Consensus 85 aaal~~~gi~v~a~~ge~~~ey~~~~~~~l~~~~~~~~p~~ilDdGgdl~~~~h~~~~~~~~~i~G~~EeTttG------ 158 (436)
T 3h9u_A 85 AAAIAKRGIPVFAWKGETEEEYMWCMKQTLKGFSGDGYPNMLLDDGGDLTNYVLDECKELDGKIYGVSEETTTG------ 158 (436)
T ss_dssp HHHHHHTTCCEEECTTCCHHHHHHHHHHTTSCBTTTBCCSEEEESSSHHHHHHHHHC-CCTTTCCCEEECSHHH------
T ss_pred HHHHHhcCCeEEEeCCCCHHHHHHHHHHHHHhcccCCCCceEeccccHHHHHHHHHhHHHHhhccceeeccCcC------
Confidence 999999999999999999999999999999 9988866799999999999999999999999999999999999
Q ss_pred HHhhcccCCCccccCCCCCccceeeecccccccccccccccccccccccccccchhhhhhhHHHHhcCCccceEEEecCC
Q psy7896 160 MFKENKLGVPAINVNDSVTKPLNMILDDGGDLTNLVHEKYPQFLSEIRGISEETTTGVHNLYKMFKENKLGVPAINVNDS 239 (718)
Q Consensus 160 ~~~~~~l~~p~~~~~~s~~k~~~~~~d~ggyf~~~~~~~~~~~~~~~~Gv~E~T~sG~~rl~~~~~~g~l~~Pv~~v~ds 239 (718)
++||++|.+++.|.+||+|||||
T Consensus 159 ---------------------------------------------------------v~rL~~~~~~g~L~iPVinvnds 181 (436)
T 3h9u_A 159 ---------------------------------------------------------VKNLYKRLQRGKLTIPAMNVNDS 181 (436)
T ss_dssp ---------------------------------------------------------HHHHHHHHHHTCCCSCEEECTTS
T ss_pred ---------------------------------------------------------hHHHHHHHHcCCCCCceEeechh
Confidence 67777777788999999999999
Q ss_pred cccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHH
Q psy7896 240 VTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEV 319 (718)
Q Consensus 240 ~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i 319 (718)
.+|+.|||.|||++|+++++.|+++
T Consensus 182 vtk~~~Dn~~Gt~~slldgi~ratg------------------------------------------------------- 206 (436)
T 3h9u_A 182 VTKSKFDNLYGCRESLVDGIKRATD------------------------------------------------------- 206 (436)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHC-------------------------------------------------------
T ss_pred hhhhhhhccccchHHHHHHHHHhcC-------------------------------------------------------
Confidence 9999999999999999999987532
Q ss_pred HHHHHHHhcccccccchhhhhhhcccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHH
Q psy7896 320 AALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEE 399 (718)
Q Consensus 320 ~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Lee 399 (718)
.++.||+|+|+|+|+||+.+|++|++|||+|+++|++|.+..++.+.|+.+.+++|
T Consensus 207 ------------------------~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~e 262 (436)
T 3h9u_A 207 ------------------------VMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVED 262 (436)
T ss_dssp ------------------------CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHH
T ss_pred ------------------------CcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHH
Confidence 45788999999999999999999999999999999999887778889999999999
Q ss_pred HhccCcEEEEcCCCCCCcCHHHHhcCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccCccccchhhHHHHhhhc
Q psy7896 400 AAKEGGIFVTTTGCKDIIRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTEALLATCN 479 (718)
Q Consensus 400 ll~~aDiIi~atgt~~lI~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e~~~~~eal~n~~~ 479 (718)
+++++|||+++++++++|++++|+.||+|++|||+||++.|||+++|....+.+..++|++
T Consensus 263 al~~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgRg~vEID~~~L~~~~~~~~~ir~~v------------------- 323 (436)
T 3h9u_A 263 VVEEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKANAKERVEVKPQV------------------- 323 (436)
T ss_dssp HTTTCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSSSGGGBCHHHHHHHCSEEEEEETTE-------------------
T ss_pred HHhhCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCCCCCccCHHHHHhhcCceEeecCCc-------------------
Confidence 9999999999999999999999999999999999999999999999988766777778877
Q ss_pred ccccccccccccCCcccccccccchhhcccchhhhHHHHhcChHHHHHHHHhcccccCCceEEEeeecchhhHHHHHHHH
Q psy7896 480 SLFKYSLVNTIHEAPTLLVHLSTDIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVLIETL 559 (718)
Q Consensus 480 ~~~~~nlv~~~h~~a~~~~Y~i~D~~La~~G~~kI~wa~~~MP~L~~Lr~~f~~~kpl~G~~i~~~lh~~~~Ta~L~~~l 559 (718)
T Consensus 324 -------------------------------------------------------------------------------- 323 (436)
T 3h9u_A 324 -------------------------------------------------------------------------------- 323 (436)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHcCCeEEeeccCcCCchHHHHHHHHhcCceEEEeeCCChHHHHHHHHHHhhcceecCCCCeEEEecCCccccccccCCC
Q psy7896 560 LELGAEVQWSSCNIFSTQDHAAAAIAARGVAVYAWKGETDEEYVWCIEQTLVDRYTLPNGNHIILLAEGRLVNLGCAMGH 639 (718)
Q Consensus 560 ~~~GA~v~~~~~nplstqd~vaaal~~~gi~v~a~~ge~~eey~~~~~~~l~~~~~~~~~~~~i~ddggdl~~~~~~~~~ 639 (718)
+.++++||-.|++...|+|||++|++||
T Consensus 324 ----------------------------------------------------d~y~~~dg~~I~LLaeGrLvNl~~~~Gh 351 (436)
T 3h9u_A 324 ----------------------------------------------------DRYTMANGRHIILLAEGRLVNLGCASGH 351 (436)
T ss_dssp ----------------------------------------------------EEEECTTSCEEEEEGGGSCHHHHHSCCS
T ss_pred ----------------------------------------------------eEEEcCCCCEEEEecCCCeecccCCCCC
Confidence 3445688899999999999999999999
Q ss_pred CcceechhHHhHHHHHHHHHhccC--CCCCc----eeeCChhhHHHHHHHhhhhcCcccccCCHHHHhhcCCCCCCCCCC
Q psy7896 640 PSFVMSNSFTNQVLAQIELWTKHS--QYPVG----VYMLPKKLDEEVAALHLEHLGVKLTKLTEDQAKYLGLPIEGPYKP 713 (718)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (718)
||||||+||+||+|||++||++++ +|++| ||.|||+|||+||++||++||++||+||++|++|||+|.+|||||
T Consensus 352 p~~vm~~sf~~q~la~~~l~~~~~~~~~~~~~~~~v~~lp~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~~~~~g~~~~ 431 (436)
T 3h9u_A 352 PSFVMSNSFCNQVLAQIELWTNRDTGKYPRGAKAQVYFLPKKLDEKVAALHLGKLGAKLTKLTPKQAEYINCPVDGPFKP 431 (436)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTTTSSCC---CCEEECCHHHHHHHHHHHHHHHTCCCCCCCHHHHHHTTSCTTCCCSC
T ss_pred hHHHhhHHHHHHHHHHHHHHhCCCcccCCCCCCceeeeCCHHHHHHHHHHHHHHcCCccccCCHHHHHhcCCCcCCCCCc
Confidence 999999999999999999999987 99999 999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q psy7896 714 DHYRY 718 (718)
Q Consensus 714 ~~~~~ 718 (718)
|||||
T Consensus 432 ~~~~~ 436 (436)
T 3h9u_A 432 DHYRY 436 (436)
T ss_dssp TTCCC
T ss_pred ccCCC
Confidence 99999
No 3
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=100.00 E-value=3e-124 Score=1028.17 Aligned_cols=419 Identities=53% Similarity=0.907 Sum_probs=393.6
Q ss_pred CCCccchHhhhhhHHHHHhhCchHHHHHHHhccCCCCCCcEEEEEeeccHhHHHHHHHHHHCCCEEEEeecCCCCCHHHH
Q psy7896 1 MADIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVLIETLLELGAEVQWSSCNIFSTQDHA 80 (718)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~mp~l~~~~~~~~~~~pl~g~ri~~~lh~~~~ta~l~~~L~~~Ga~v~~~~~n~~stqd~~ 80 (718)
|+||+||+|||++|+||++|||+||++|++|+++|||+|+||++|+|||+|||+|++||+++||||+||+||||||||||
T Consensus 16 v~d~~la~~g~~~i~~a~~~mp~l~~~r~~~~~~~pl~G~ri~~~lH~~~~Ta~l~~tL~~~GA~v~~~~~n~~stqd~~ 95 (435)
T 3gvp_A 16 VKNIKQAEFGRREIEIAEQEMPALMALRKRAQGEKPLAGAKIVGCTHITAQTAVLMETLGALGAQCRWAACNIYSTLNEV 95 (435)
T ss_dssp CSCGGGHHHHHHHHHHHHHTCHHHHHHHHHHSTTCTTTTCEEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSCCCHHH
T ss_pred ccChhhhHHhHHHHHHHHHhCHHHHHHHHHHhccCCCCCCEEEEEEccHHHHHHHHHHHHHCCCEEEEEecCCCcChHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCeEEEecCCCHHHHHHHHHHHccCCCCCCceeEecCcchhHHHHHhhChhhhhcccCCCcccchhHHhHHHH
Q psy7896 81 AAAIAARGVAVYAWKGETDEEYVWCIEQTLVFPDGKPLNMILDDGGDLTNLVHEKYPQFLSEIRGISEETTTGVHNLYKM 160 (718)
Q Consensus 81 aaal~~~gv~v~a~~~~~~~ey~~~~~~~~~~~~~~~~~~i~Ddggdl~~~~~~~~~~~~~~~~g~~eet~~g~~~~~~~ 160 (718)
||||++.|||||||||||++||||||+++|.|++++| |||+||||||++++|++||+++++|+|++||||||
T Consensus 96 aaal~~~gi~v~a~~g~~~~ey~~~~~~~~~~~~~~p-~~ilDdGgdl~~~~h~~~~~~~~~i~G~~EeTttG------- 167 (435)
T 3gvp_A 96 AAALAESGFPVFAWKGESEDDFWWCIDRCVNVEGWQP-NMILDDGGDLTHWIYKKYPNMFKKIKGIVEESVTG------- 167 (435)
T ss_dssp HHHHHHHTCCEECCTTCCHHHHHHHHHHHHCBTTBCC-SEEEESSSHHHHHHHHHCHHHHHTCCEEEECCHHH-------
T ss_pred HHHHHhcCCeEEEecCCCHHHHHHHHHHHHhccCCCC-cEEEecchHHHHHHHHHhHHHHhhcceeEeccchh-------
Confidence 9999999999999999999999999999999876655 99999999999999999999999999999999999
Q ss_pred HhhcccCCCccccCCCCCccceeeecccccccccccccccccccccccccccchhhhhhhHHHHhcCCccceEEEecCCc
Q psy7896 161 FKENKLGVPAINVNDSVTKPLNMILDDGGDLTNLVHEKYPQFLSEIRGISEETTTGVHNLYKMFKENKLGVPAINVNDSV 240 (718)
Q Consensus 161 ~~~~~l~~p~~~~~~s~~k~~~~~~d~ggyf~~~~~~~~~~~~~~~~Gv~E~T~sG~~rl~~~~~~g~l~~Pv~~v~ds~ 240 (718)
|||||+|+++|+|.+||+|||||+
T Consensus 168 --------------------------------------------------------v~rl~~~~~~g~L~~Pvi~vnds~ 191 (435)
T 3gvp_A 168 --------------------------------------------------------VHRLYQLSKAGKLCVPAMNVNDSV 191 (435)
T ss_dssp --------------------------------------------------------HHHHTCC--CCCCCSCEEECTTCH
T ss_pred --------------------------------------------------------HHHHHHHHHcCCCCCCEEEecchh
Confidence 677788878889999999999999
Q ss_pred ccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHHH
Q psy7896 241 TKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEVA 320 (718)
Q Consensus 241 ~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i~ 320 (718)
+|++|||+|||++|+++++.|+++
T Consensus 192 tK~~fDn~yGt~~s~~~gi~rat~-------------------------------------------------------- 215 (435)
T 3gvp_A 192 TKQKFDNLYCCRESILDGLKRTTD-------------------------------------------------------- 215 (435)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHC--------------------------------------------------------
T ss_pred hhhhhhhhhhhHHHHHHHHHHhhC--------------------------------------------------------
Confidence 999999999999999999998643
Q ss_pred HHHHHHhcccccccchhhhhhhcccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHH
Q psy7896 321 ALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEA 400 (718)
Q Consensus 321 ~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leel 400 (718)
..+.||+|+|+|+|+||+.+|++|++|||+|+++|++|.+..++.++|+.+.+++++
T Consensus 216 -----------------------~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leea 272 (435)
T 3gvp_A 216 -----------------------MMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEV 272 (435)
T ss_dssp -----------------------CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHH
T ss_pred -----------------------ceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHH
Confidence 356788999999999999999999999999999999998888888899999999999
Q ss_pred hccCcEEEEcCCCCCCcCHHHHhcCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccCccccchhhHHHHhhhcc
Q psy7896 401 AKEGGIFVTTTGCKDIIRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTEALLATCNS 480 (718)
Q Consensus 401 l~~aDiIi~atgt~~lI~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~ 480 (718)
++.+|+|+++++|+++|++++|+.||+|++|||+||++.|+|+++|......+..++|++
T Consensus 273 l~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~EId~~~L~~~~~~~~~ir~~v-------------------- 332 (435)
T 3gvp_A 273 IRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVASLRTPELTWERVRSQV-------------------- 332 (435)
T ss_dssp TTTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTTTBTGGGGCSTTCEEEEEETTE--------------------
T ss_pred HhcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCccCCHHHHHhhcceeEEEEcCe--------------------
Confidence 999999999999999999999999999999999999999999999876555666777777
Q ss_pred cccccccccccCCcccccccccchhhcccchhhhHHHHhcChHHHHHHHHhcccccCCceEEEeeecchhhHHHHHHHHH
Q psy7896 481 LFKYSLVNTIHEAPTLLVHLSTDIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVLIETLL 560 (718)
Q Consensus 481 ~~~~nlv~~~h~~a~~~~Y~i~D~~La~~G~~kI~wa~~~MP~L~~Lr~~f~~~kpl~G~~i~~~lh~~~~Ta~L~~~l~ 560 (718)
T Consensus 333 -------------------------------------------------------------------------------- 332 (435)
T 3gvp_A 333 -------------------------------------------------------------------------------- 332 (435)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCCeEEeeccCcCCchHHHHHHHHhcCceEEEeeCCChHHHHHHHHHHhhcceecCCCCeEEEecCCccccccccCCCC
Q psy7896 561 ELGAEVQWSSCNIFSTQDHAAAAIAARGVAVYAWKGETDEEYVWCIEQTLVDRYTLPNGNHIILLAEGRLVNLGCAMGHP 640 (718)
Q Consensus 561 ~~GA~v~~~~~nplstqd~vaaal~~~gi~v~a~~ge~~eey~~~~~~~l~~~~~~~~~~~~i~ddggdl~~~~~~~~~~ 640 (718)
+.++++||..|++...|+|||++|+ |||
T Consensus 333 ---------------------------------------------------~~y~~~dg~~I~LLAeGrLvNl~~~-~hp 360 (435)
T 3gvp_A 333 ---------------------------------------------------DHVIWPDGKRIVLLAEGRLLNLSCS-TVP 360 (435)
T ss_dssp ---------------------------------------------------EEEECTTSCEEEEEGGGSBHHHHHC-CCC
T ss_pred ---------------------------------------------------eeEEcCCCcEEEEecCCCEeeecCC-CCc
Confidence 2334688889999999999999999 599
Q ss_pred cceechhHHhHHHHHHHHHhcc-CCCCCceeeCChhhHHHHHHHhhhhcCcccccCCHHHHhhcCCCCCCCCCCC
Q psy7896 641 SFVMSNSFTNQVLAQIELWTKH-SQYPVGVYMLPKKLDEEVAALHLEHLGVKLTKLTEDQAKYLGLPIEGPYKPD 714 (718)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (718)
|||||+||+||+|||+|||+++ ++|+++||.|||+|||+||++||++||++||+||++|++|||+|.+||||||
T Consensus 361 ~~vm~~sf~~q~la~~~l~~~~~~~~~~~v~~lp~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~~~~~g~~k~~ 435 (435)
T 3gvp_A 361 TFVLSITATTQALALIELYNAPEGRYKQDVYLLPKKMDEYVASLHLPTFDAHLTELTDEQAKYLGLNKNGPFKPN 435 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTTSCSSEEECCHHHHHHHHHHHGGGGTCCCCCCCHHHHHHHTCCTTCCCSCC
T ss_pred HHHHhHHHHHHHHHHHHHHhCcccccCCCeeeCCHHHHHHHHHHHHHhcCCEeccCCHHHHHHcCCCCCCCCCCC
Confidence 9999999999999999999996 6999999999999999999999999999999999999999999999999997
No 4
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=100.00 E-value=1.7e-117 Score=988.99 Aligned_cols=461 Identities=60% Similarity=0.952 Sum_probs=403.5
Q ss_pred CCCccchHhhhhhHHHHHhhCchHHHHHHHhccCCCCCCcEEEEEeeccHhHHHHHHHHHHCCCEEEEeecCCCCCHHHH
Q psy7896 1 MADIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVLIETLLELGAEVQWSSCNIFSTQDHA 80 (718)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~mp~l~~~~~~~~~~~pl~g~ri~~~lh~~~~ta~l~~~L~~~Ga~v~~~~~n~~stqd~~ 80 (718)
|+||+||+|||++|+||++|||+||++|++|+++|||||+||++|||||+|||+|+|||+++||||+|||||||||||||
T Consensus 19 v~d~~la~~g~~~i~~a~~~mp~l~~~r~~~~~~~pl~g~ri~~~lh~t~~ta~l~~tl~~~GA~v~~~~~n~~stqd~~ 98 (488)
T 3ond_A 19 VKDMSQADFGRLEIELAEVEMPGLMASRSEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHA 98 (488)
T ss_dssp ESCGGGHHHHHHHHHHHHHTCHHHHHHHHHHGGGCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTCCCHHH
T ss_pred ccChhhhHHhhHHHHHHHhhCHHHHHHHHHHhcCCCCCCCEEEEEeccHHHHHHHHHHHHHcCCeEEEecCCCCCCcHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCeEEEecCCCHHHHHHHHHHHccCCCCCCceeEecCcchhHHHHHhhChhh-hhcccCCCcccch----hHH
Q psy7896 81 AAAIAARGVAVYAWKGETDEEYVWCIEQTLVFPDGKPLNMILDDGGDLTNLVHEKYPQF-LSEIRGISEETTT----GVH 155 (718)
Q Consensus 81 aaal~~~gv~v~a~~~~~~~ey~~~~~~~~~~~~~~~~~~i~Ddggdl~~~~~~~~~~~-~~~~~g~~eet~~----g~~ 155 (718)
||||++.|||||||||||++|||||++++|+|++|.+||||+||||||++++|+..... -.+..|...++++ -.+
T Consensus 99 aaa~~~~g~~v~a~~ge~~~ey~~~~~~~l~~~~~~~p~~i~Ddggd~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (488)
T 3ond_A 99 AAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDTTLLIHEGVKAEEIYEKSGQFPDPDSTDNAEFK 178 (488)
T ss_dssp HHHHHHHTCEEEECTTCCHHHHHHHHHHHHCCCTTCCCSEEEESSSHHHHHHHHHHHHHHHHHHHCCCCCGGGCCCHHHH
T ss_pred HHHHHhcCCeEEEeCCCCHHHHHHHHHHHHhcccCCCCCEEEECchHHHHHHHcchhhhcchhhccccCCCCCCCchHHH
Confidence 99999999999999999999999999999999888777999999999999999843200 0001112222221 123
Q ss_pred hHHHHHhhcccCCCccccCCCCCccceeeecccccccccccccccccccccccccccchhhhhhhHHHHhcCCccceEEE
Q psy7896 156 NLYKMFKENKLGVPAINVNDSVTKPLNMILDDGGDLTNLVHEKYPQFLSEIRGISEETTTGVHNLYKMFKENKLGVPAIN 235 (718)
Q Consensus 156 ~~~~~~~~~~l~~p~~~~~~s~~k~~~~~~d~ggyf~~~~~~~~~~~~~~~~Gv~E~T~sG~~rl~~~~~~g~l~~Pv~~ 235 (718)
-|++.++... ...+.+|+++.++++|++|+|++|++||++|+++|.|.+||+|
T Consensus 179 ~~~~~~~~~~---------------------------~~~~~~~~~~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPvin 231 (488)
T 3ond_A 179 IVLSIIKEGL---------------------------KTDPKRYHKMKDRVVGVSEETTTGVKRLYQMQANGTLLFPAIN 231 (488)
T ss_dssp HHHHHHHHHH---------------------------TTCTTHHHHHHHHCCEEEECSHHHHHHHHHHHHTTCCCSCEEE
T ss_pred HHHHHHHHHH---------------------------hhCcchhHHHHhhcceeEecccccHHHHHHHHHcCCCCCceec
Confidence 3444443221 1123578899999999999999999999999999999999999
Q ss_pred ecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhh
Q psy7896 236 VNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEL 315 (718)
Q Consensus 236 v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L 315 (718)
||||.+|++|||+|||++|+++++.|.++
T Consensus 232 vnDs~tK~~fDn~yGt~~sl~dgi~r~tg--------------------------------------------------- 260 (488)
T 3ond_A 232 VNDSVTKSKFDNLYGCRHSLPDGLMRATD--------------------------------------------------- 260 (488)
T ss_dssp CTTSHHHHTTHHHHHHHHHHHHHHHHHHC---------------------------------------------------
T ss_pred ccchhhhhHhhhhccccHHHHHHHHHHcC---------------------------------------------------
Confidence 99999999999999999999999988544
Q ss_pred hHHHHHHHHHHhcccccccchhhhhhhcccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec
Q psy7896 316 DEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT 395 (718)
Q Consensus 316 ~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~ 395 (718)
..+.||+|+|+|+|.||+.+|++|+++|++|+++|++|.+..++.+.|+.+.
T Consensus 261 ----------------------------~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~ 312 (488)
T 3ond_A 261 ----------------------------VMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVL 312 (488)
T ss_dssp ----------------------------CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC
T ss_pred ----------------------------CcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccC
Confidence 3467788888888889999999999999999999999988777778899999
Q ss_pred CHHHHhccCcEEEEcCCCCCCcCHHHHhcCCCCeEEEEcCCCCccccHHHHhccc-cceeeecCCcccCccccchhhHHH
Q psy7896 396 TMEEAAKEGGIFVTTTGCKDIIRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDKNA-VEKVNVKPQVSPTSRTKHLTTEAL 474 (718)
Q Consensus 396 ~Leell~~aDiIi~atgt~~lI~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~-l~~~~v~P~V~v~s~e~~~~~eal 474 (718)
+++++++.+|+|+.++++.++++.++++.||++++++|+|+++.|++.+.+.... +.+..+++++
T Consensus 313 ~lee~~~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~~~Ei~~~~l~~~~~v~~~~i~~~v-------------- 378 (488)
T 3ond_A 313 TLEDVVSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGLETHPGVKRITIKPQT-------------- 378 (488)
T ss_dssp CGGGTTTTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSSTTTTBTHHHHHTSTTCEEEEEETTE--------------
T ss_pred CHHHHHHhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCCCcccchHHHHHhhhhheEEeeeeE--------------
Confidence 9999999999999999999999999999999999999999998889888776531 1333344443
Q ss_pred HhhhcccccccccccccCCcccccccccchhhcccchhhhHHHHhcChHHHHHHHHhcccccCCceEEEeeecchhhHHH
Q psy7896 475 LATCNSLFKYSLVNTIHEAPTLLVHLSTDIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAV 554 (718)
Q Consensus 475 ~n~~~~~~~~nlv~~~h~~a~~~~Y~i~D~~La~~G~~kI~wa~~~MP~L~~Lr~~f~~~kpl~G~~i~~~lh~~~~Ta~ 554 (718)
T Consensus 379 -------------------------------------------------------------------------------- 378 (488)
T 3ond_A 379 -------------------------------------------------------------------------------- 378 (488)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHcCCeEEeeccCcCCchHHHHHHHHhcCceEEEeeCCChHHHHHHHHHHhhcceecCC-CCeEEEecCCccccc
Q psy7896 555 LIETLLELGAEVQWSSCNIFSTQDHAAAAIAARGVAVYAWKGETDEEYVWCIEQTLVDRYTLPN-GNHIILLAEGRLVNL 633 (718)
Q Consensus 555 L~~~l~~~GA~v~~~~~nplstqd~vaaal~~~gi~v~a~~ge~~eey~~~~~~~l~~~~~~~~-~~~~i~ddggdl~~~ 633 (718)
....+++ +.-+.+-..|++||+
T Consensus 379 ---------------------------------------------------------~~~~~~~fg~aI~lLaeGRIVNl 401 (488)
T 3ond_A 379 ---------------------------------------------------------DRWVFPETNTGIIILAEGRLMNL 401 (488)
T ss_dssp ---------------------------------------------------------EEEECTTTCCEEEEEGGGSCHHH
T ss_pred ---------------------------------------------------------EEEEecchHHHHHHHcCCcEEEE
Confidence 1122455 677778888999999
Q ss_pred cccCCCCcceechhHHhHHHHHHHHHhccC--CCCCceeeCChhhHHHHHHHhhhhcCcccccCCHHHHhhcCCCCCCCC
Q psy7896 634 GCAMGHPSFVMSNSFTNQVLAQIELWTKHS--QYPVGVYMLPKKLDEEVAALHLEHLGVKLTKLTEDQAKYLGLPIEGPY 711 (718)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (718)
+|+.|||+||||+||+||+|||++||++++ +|++|||.|||+|||+||++||++||++||+||++|++|||+|.+|||
T Consensus 402 sS~~G~p~~vm~~sfa~Q~la~~~l~~~~~~~~~~~gv~~lp~~ld~~vA~l~l~~~g~~l~~lt~~q~~y~~~~~~g~~ 481 (488)
T 3ond_A 402 GCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYISVPVEGPY 481 (488)
T ss_dssp HHSCCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSSEECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHTTCCTTSCC
T ss_pred ecCcccCcccccccHHHHHHHHHHHHhCCCccccCCCceeCCHHHHHHHHHHhchhcCCchhhcCHHHHHHcCCCCCCCC
Confidence 999999999999999999999999999986 999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q psy7896 712 KPDHYRY 718 (718)
Q Consensus 712 ~~~~~~~ 718 (718)
|||||||
T Consensus 482 k~~~~~y 488 (488)
T 3ond_A 482 KPFHYRY 488 (488)
T ss_dssp SCTTCCC
T ss_pred CccCCCC
Confidence 9999999
No 5
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=100.00 E-value=8.8e-100 Score=847.60 Aligned_cols=460 Identities=52% Similarity=0.876 Sum_probs=398.8
Q ss_pred CCCccchHhhhhhHHHHHhhCchHHHHHHHhccCCCCCCcEEEEEeeccHhHHHHHHHHHHCCCEEEEeecCCCCCHHHH
Q psy7896 1 MADIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVLIETLLELGAEVQWSSCNIFSTQDHA 80 (718)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~mp~l~~~~~~~~~~~pl~g~ri~~~lh~~~~ta~l~~~L~~~Ga~v~~~~~n~~stqd~~ 80 (718)
|+||+||+||||+|+||++|||+||++|++|+++|||||+||++|+|||+|||+|+|||+++||||+|||||||||||||
T Consensus 8 v~d~~la~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~g~ri~~~lh~~~~ta~l~~tL~~~Ga~v~~~~~n~~stqd~~ 87 (479)
T 1v8b_A 8 VKDISLAPFGKMQMEISENEMPGLMRIREEYGKDQPLKNAKITGCLHMTVECALLIETLQKLGAQIRWCSCNIYSTADYA 87 (479)
T ss_dssp CSCGGGHHHHHHHHHHHGGGCHHHHHHHHHSTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSSSCCCHHH
T ss_pred ecChhhhhHhHHHHHHHHhHCHHHHHHHHHhhccCCCCCCEEEEEeccHHHHHHHHHHHHHCCCEEEEecCCCCCchHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHh-CCCeEEEecCCCHHHHHHHHHHHccCCCC--CCceeEecCcchhHHHHHhhChhhhh--cccCCCcccc---h
Q psy7896 81 AAAIAA-RGVAVYAWKGETDEEYVWCIEQTLVFPDG--KPLNMILDDGGDLTNLVHEKYPQFLS--EIRGISEETT---T 152 (718)
Q Consensus 81 aaal~~-~gv~v~a~~~~~~~ey~~~~~~~~~~~~~--~~~~~i~Ddggdl~~~~~~~~~~~~~--~~~g~~eet~---~ 152 (718)
||||++ .|||||||||||.+|||||++++|+|+++ ++||||+||||||++++|....-... + .+...+.+ +
T Consensus 88 aaal~~~~gi~v~a~~g~~~~ey~~~~~~~l~~~~~~~~~~~~i~ddggd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 166 (479)
T 1v8b_A 88 AAAVSTLENVTVFAWKNETLEEYWWCVESALTWGDGDDNGPDMIVDDGGDATLLVHKGVEYEKLYEE-KNILPDPEKAKN 166 (479)
T ss_dssp HHHHTTSTTEEEECCTTCCHHHHHHHHHHHHCCSSSSSCSCSEEEESSSHHHHHHHHHHHHHHHHHH-HCCCCCGGGCSS
T ss_pred HHHHhhcCCceEEEeCCCCHHHHHHHHHHHhcCcccccCCCCEEEeccchHHHHHHcchhhhhcccc-ccccCCccccCc
Confidence 999999 79999999999999999999999999876 23599999999999999943210000 0 01111111 1
Q ss_pred -hHHhHHHHHhhcccCCCccccCCCCCccceeeecccccccccccccccccccccccccccchhhhhhhHHHHhcCCccc
Q psy7896 153 -GVHNLYKMFKENKLGVPAINVNDSVTKPLNMILDDGGDLTNLVHEKYPQFLSEIRGISEETTTGVHNLYKMFKENKLGV 231 (718)
Q Consensus 153 -g~~~~~~~~~~~~l~~p~~~~~~s~~k~~~~~~d~ggyf~~~~~~~~~~~~~~~~Gv~E~T~sG~~rl~~~~~~g~l~~ 231 (718)
.-+-||..++.. +...+.+++.+.+++.|++|+|.+|++|+++|.+.|.+.+
T Consensus 167 ~~~~~~~~~l~~~---------------------------la~~~~~~~~l~~~l~gi~eet~~Gvd~l~a~~~~Gilv~ 219 (479)
T 1v8b_A 167 EEERCFLTLLKNS---------------------------ILKNPKKWTNIAKKIIGVSEETTTGVLRLKKMDKQNELLF 219 (479)
T ss_dssp HHHHHHHHHHHHH---------------------------HTTCTTHHHHHHTTCCEEEECSHHHHHHHHHHHHTTCCCS
T ss_pred hHHHHHHHHHHHh---------------------------hhcChhhHHHHhcCeEEEEEeeCccHhHHHHHHHcCCEEe
Confidence 002233333211 0112356777778999999999999999999999999999
Q ss_pred eEEEecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhh
Q psy7896 232 PAINVNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASME 311 (718)
Q Consensus 232 Pv~~v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~Avae 311 (718)
|+.++|+|..+.+|+|.||+.+++.++|.|.
T Consensus 220 p~~~vn~sVae~l~r~~~~~~~~l~~gw~r~------------------------------------------------- 250 (479)
T 1v8b_A 220 TAINVNDAVTKQKYDNVYGCRHSLPDGLMRA------------------------------------------------- 250 (479)
T ss_dssp EEEECTTSHHHHTTHHHHHHHHHHHHHHHHH-------------------------------------------------
T ss_pred ccCCccHHHHHHHHhchHhHHHHHhhhhhhc-------------------------------------------------
Confidence 9999999999999999999999887776542
Q ss_pred hhhhhHHHHHHHHHHhcccccccchhhhhhhcccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcC
Q psy7896 312 GYELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG 391 (718)
Q Consensus 312 Gf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G 391 (718)
.+.++.||+|||||+|+||+.+|++|++|||+|+++|++|.+..++.+.|
T Consensus 251 ------------------------------~~~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g 300 (479)
T 1v8b_A 251 ------------------------------TDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEG 300 (479)
T ss_dssp ------------------------------HCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTT
T ss_pred ------------------------------cccccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcC
Confidence 23568899999999999999999999999999999999987766777889
Q ss_pred ceecCHHHHhccCcEEEEcCCCCCCcCHHHHhcCCCCeEEEEcCCCCccccHHHHhc-cccceeeecCCcccCccccchh
Q psy7896 392 YEVTTMEEAAKEGGIFVTTTGCKDIIRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDK-NAVEKVNVKPQVSPTSRTKHLT 470 (718)
Q Consensus 392 ~~v~~Leell~~aDiIi~atgt~~lI~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~-~~l~~~~v~P~V~v~s~e~~~~ 470 (718)
+.+.++++++++||+|+++++++++|+++.|+.||+|++|||+||++.|||.++|.+ .+++...+++.++++
T Consensus 301 ~~~~~l~ell~~aDiVi~~~~t~~lI~~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~a~lDv~------- 373 (479)
T 1v8b_A 301 FNVVTLDEIVDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVKPQVDRI------- 373 (479)
T ss_dssp CEECCHHHHTTTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEETTEEEE-------
T ss_pred CEecCHHHHHhcCCEEEECCChhhhcCHHHHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEeeeEEEE-------
Confidence 999999999999999999999999999999999999999999999998899999987 456666666655322
Q ss_pred hHHHHhhhcccccccccccccCCcccccccccchhhcccchhhhHHHHhcChHHHHHHHHhcccccCCceEEEeeecchh
Q psy7896 471 TEALLATCNSLFKYSLVNTIHEAPTLLVHLSTDIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTV 550 (718)
Q Consensus 471 ~eal~n~~~~~~~~nlv~~~h~~a~~~~Y~i~D~~La~~G~~kI~wa~~~MP~L~~Lr~~f~~~kpl~G~~i~~~lh~~~ 550 (718)
T Consensus 374 -------------------------------------------------------------------------------- 373 (479)
T 1v8b_A 374 -------------------------------------------------------------------------------- 373 (479)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHcCCeEEeeccCcCCchHHHHHHHHhcCceEEEeeCCChHHHHHHHHHHhhcceecCCCCeEEEecCCcc
Q psy7896 551 QTAVLIETLLELGAEVQWSSCNIFSTQDHAAAAIAARGVAVYAWKGETDEEYVWCIEQTLVDRYTLPNGNHIILLAEGRL 630 (718)
Q Consensus 551 ~Ta~L~~~l~~~GA~v~~~~~nplstqd~vaaal~~~gi~v~a~~ge~~eey~~~~~~~l~~~~~~~~~~~~i~ddggdl 630 (718)
..+++..++....+++
T Consensus 374 ----------------------------------------------------------------plp~~~~l~~l~~~nv 389 (479)
T 1v8b_A 374 ----------------------------------------------------------------TLPNGNKIIVLARGRL 389 (479)
T ss_dssp ----------------------------------------------------------------ECTTSCEEEEEGGGSB
T ss_pred ----------------------------------------------------------------ECCCCCeeeEecCCCE
Confidence 1233445666666789
Q ss_pred ccccccCCCCcceechhHHhHHHHHHHHHhccC--CCCCceeeCChhhHHHHHHHhhhhcCcccccCCHHHHhhcCCCCC
Q psy7896 631 VNLGCAMGHPSFVMSNSFTNQVLAQIELWTKHS--QYPVGVYMLPKKLDEEVAALHLEHLGVKLTKLTEDQAKYLGLPIE 708 (718)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (718)
+++.|++|||+++|+.||++|+++++++|.+.. .++++||.||+.+|++||.+||+++|+++++||++|.+|++++.+
T Consensus 390 v~tH~atghp~e~~~~s~a~~~~~ni~~~~~g~~~~l~n~V~~lp~~~de~va~l~L~~lG~~l~~lt~~q~~yi~v~~~ 469 (479)
T 1v8b_A 390 LNLGCATGHPAFVMSFSFCNQTFAQLDLWQNKDTNKYENKVYLLPKHLDEKVALYHLKKLNASLTELDDNQCQFLGVNKS 469 (479)
T ss_dssp HHHHSSCCSCHHHHHHHHHHHHHHHHHHHHTTTSSSCCSSEECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHHTCCTT
T ss_pred EEEeccCCCCchhHHHHHHHHHHHHHHHHHcCCCCcCCcceEeCChhhHHHHHHHHHHHcCChHhhcChhhhhhEeeeeC
Confidence 999999999999999999999999999999988 999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCC
Q psy7896 709 GPYKPDHYRY 718 (718)
Q Consensus 709 ~~~~~~~~~~ 718 (718)
||||||||||
T Consensus 470 g~~~~~~~~~ 479 (479)
T 1v8b_A 470 GPFKSNEYRY 479 (479)
T ss_dssp SCCSCTTCCC
T ss_pred CCCCcccCCC
Confidence 9999999999
No 6
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=100.00 E-value=1.8e-96 Score=825.16 Aligned_cols=458 Identities=58% Similarity=0.926 Sum_probs=396.3
Q ss_pred CCCccchHhhhhhHHHHHhhCchHHHHHHHhccCCCCCCcEEEEEeeccHhHHHHHHHHHHCCCEEEEeecCCCCCHHHH
Q psy7896 1 MADIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVLIETLLELGAEVQWSSCNIFSTQDHA 80 (718)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~mp~l~~~~~~~~~~~pl~g~ri~~~lh~~~~ta~l~~~L~~~Ga~v~~~~~n~~stqd~~ 80 (718)
|+||+||+|||++|+||++|||+||++|++|+++|||||+||++|+|||+|||+|+|||+++||||+|||||||||||||
T Consensus 22 v~d~~la~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~g~~i~~~~h~~~~ta~l~~~l~~~ga~v~~~~~n~~stqd~~ 101 (494)
T 3ce6_A 22 IADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHA 101 (494)
T ss_dssp CSCGGGHHHHHHHHHHHHHHCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTCCCHHH
T ss_pred ecChhhhHHhHHHHHHHHHHCHHHHHHHHHhhccCCCCCCEEEEEeecHHHHHHHHHHHHHCCCeEEEeecCCCCchHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhC---------CCeEEEecCCCHHHHHHHHHHHccCCCC-CCceeEecCcchhHHHHHhhChhhhhcccCCCccc
Q psy7896 81 AAAIAAR---------GVAVYAWKGETDEEYVWCIEQTLVFPDG-KPLNMILDDGGDLTNLVHEKYPQFLSEIRGISEET 150 (718)
Q Consensus 81 aaal~~~---------gv~v~a~~~~~~~ey~~~~~~~~~~~~~-~~~~~i~Ddggdl~~~~~~~~~~~~~~~~g~~eet 150 (718)
||||++. |||||||||||.+|||||++++|+|+++ +|+|||+||||||++++|....-... +...+.
T Consensus 102 aaa~~~~~~~~~~~~~g~~v~a~~g~~~~~y~~~~~~~~~~~~~~~~~~~i~ddggd~~~~~~~~~~~~~~---~~~~~~ 178 (494)
T 3ce6_A 102 AAAVVVGPHGTPDEPKGVPVFAWKGETLEEYWWAAEQMLTWPDPDKPANMILDDGGDATMLVLRGMQYEKA---GVVPPA 178 (494)
T ss_dssp HHHHHHCSSCCSSSCCSCCEECCTTCCHHHHHHHHHHHHCCSSTTSCCCEEEESSSHHHHHHHHHHHHHHH---TSCCCC
T ss_pred HHHHhhhccccccCCCCeEEEEeCCCCHHHHHHHHHHHHhccccCCCceEEeecchHHHHHHHcchhhhcc---cccCCc
Confidence 9999999 9999999999999999999999999876 56699999999999999954321111 222222
Q ss_pred ch----hHHhHHHHHhhcccCCCccccCCCCCccceeeecccccccccccccccccccccccccccchhhhhhhHHHHhc
Q psy7896 151 TT----GVHNLYKMFKENKLGVPAINVNDSVTKPLNMILDDGGDLTNLVHEKYPQFLSEIRGISEETTTGVHNLYKMFKE 226 (718)
Q Consensus 151 ~~----g~~~~~~~~~~~~l~~p~~~~~~s~~k~~~~~~d~ggyf~~~~~~~~~~~~~~~~Gv~E~T~sG~~rl~~~~~~ 226 (718)
++ -.+-|++.+|.. +...+.+++.....+.|++|+|++|++|++.|.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~---------------------------l~~~~~~~p~~~~~i~GvveetgtGVd~l~a~~~~ 231 (494)
T 3ce6_A 179 EEDDPAEWKVFLNLLRTR---------------------------FETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAA 231 (494)
T ss_dssp CTTSCHHHHHHHHHHHHH---------------------------HHHCSSHHHHHHHHCCCEEECSHHHHHHHHHHHHT
T ss_pred ccCchHHHHHHHHHHHHH---------------------------hhcCcccchhhhcCeEEEEEEeCCChhHHHHHHHc
Confidence 21 123344444322 11223566777789999999999999999999999
Q ss_pred CCccceEEEecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhh
Q psy7896 227 NKLGVPAINVNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINAL 306 (718)
Q Consensus 227 g~l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v 306 (718)
|.+.+|+.++|++..|..|+|.|+|++++++++.|++
T Consensus 232 Gilv~~~~~vn~sVae~~~r~l~~~~~s~~~g~~r~~------------------------------------------- 268 (494)
T 3ce6_A 232 GDLAFPAINVNDSVTKSKFDNKYGTRHSLIDGINRGT------------------------------------------- 268 (494)
T ss_dssp TCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHHHH-------------------------------------------
T ss_pred CCEEEecCCccHHHHHHHHhhhhhhhhhhhHHHHhcc-------------------------------------------
Confidence 9999999999999999999999999999988876632
Q ss_pred hhhhhhhhhhHHHHHHHHHHhcccccccchhhhhhhcccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHH
Q psy7896 307 QASMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQ 386 (718)
Q Consensus 307 ~AvaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~ 386 (718)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|++|.+...
T Consensus 269 ------------------------------------~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~ 312 (494)
T 3ce6_A 269 ------------------------------------DALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQ 312 (494)
T ss_dssp ------------------------------------CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred ------------------------------------CCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 12467899999999999999999999999999999999987767
Q ss_pred HhhcCceecCHHHHhccCcEEEEcCCCCCCcCHHHHhcCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccCccc
Q psy7896 387 ASMEGYEVTTMEEAAKEGGIFVTTTGCKDIIRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRT 466 (718)
Q Consensus 387 a~~~G~~v~~Leell~~aDiIi~atgt~~lI~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e 466 (718)
+.+.|+.+.+++++++.+|+|++++++.++|+.+.++.||++++++|+||++.++|.++|....++...+.+.++++
T Consensus 313 A~~~Ga~~~~l~e~l~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~~~ldv~--- 389 (494)
T 3ce6_A 313 AMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLERSGATRVNVKPQVDLW--- 389 (494)
T ss_dssp HHHTTCEECCHHHHGGGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEETTEEEE---
T ss_pred HHHcCCEEecHHHHHhCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCCCccCHHHHHHhhhccceEEEEEEEe---
Confidence 77889988899999999999999999999999999999999999999999987788888765334333333333110
Q ss_pred cchhhHHHHhhhcccccccccccccCCcccccccccchhhcccchhhhHHHHhcChHHHHHHHHhcccccCCceEEEeee
Q psy7896 467 KHLTTEALLATCNSLFKYSLVNTIHEAPTLLVHLSTDIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCL 546 (718)
Q Consensus 467 ~~~~~eal~n~~~~~~~~nlv~~~h~~a~~~~Y~i~D~~La~~G~~kI~wa~~~MP~L~~Lr~~f~~~kpl~G~~i~~~l 546 (718)
T Consensus 390 -------------------------------------------------------------------------------- 389 (494)
T 3ce6_A 390 -------------------------------------------------------------------------------- 389 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhhHHHHHHHHHHcCCeEEeeccCcCCchHHHHHHHHhcCceEEEeeCCChHHHHHHHHHHhhcceecCC-CCeEEEe
Q psy7896 547 HMTVQTAVLIETLLELGAEVQWSSCNIFSTQDHAAAAIAARGVAVYAWKGETDEEYVWCIEQTLVDRYTLPN-GNHIILL 625 (718)
Q Consensus 547 h~~~~Ta~L~~~l~~~GA~v~~~~~nplstqd~vaaal~~~gi~v~a~~ge~~eey~~~~~~~l~~~~~~~~-~~~~i~d 625 (718)
.+++ +..+.+-
T Consensus 390 --------------------------------------------------------------------~~~~~~~~l~LL 401 (494)
T 3ce6_A 390 --------------------------------------------------------------------TFGDTGRSIIVL 401 (494)
T ss_dssp --------------------------------------------------------------------ECTTTCCEEEEE
T ss_pred --------------------------------------------------------------------ecCCcchHHHHH
Confidence 1122 3345566
Q ss_pred cCCccccccccCCCCcceechhHHhHHHHHHHHHhccCCCCCceeeCChhhHHHHHHHhhhhcCcccccCCHHHHhhcCC
Q psy7896 626 AEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWTKHSQYPVGVYMLPKKLDEEVAALHLEHLGVKLTKLTEDQAKYLGL 705 (718)
Q Consensus 626 dggdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (718)
..|.+++++|.++||+++|+.+|.+|++.+++.|.++..+...|+++|+++|++||.+||+++|++|++||++|++||++
T Consensus 402 ~~grlvnL~~~TPH~a~~~~~s~~~qa~~ai~~~~~g~~~~~~V~~~P~~~De~vA~lhL~~lg~~l~~lt~~q~~y~~v 481 (494)
T 3ce6_A 402 SEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKNDEYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGV 481 (494)
T ss_dssp GGGSCHHHHHSCCSCHHHHHHHHHHHHHHHHHHHHTGGGCCSSEECCCHHHHHHHHHHHHHHHTCCCCCCCHHHHHHHTC
T ss_pred hCCCEEeccCCCCCccccchHHHHHHHHHHHHHHHcCCCCCCEEEECHHHHHHHHHHhhHHHHHHHHHHhChhHHHHccc
Confidence 67899999999999999999999999999999999988999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCC
Q psy7896 706 PIEGPYKPDHYRY 718 (718)
Q Consensus 706 ~~~~~~~~~~~~~ 718 (718)
+.+||||||||||
T Consensus 482 ~~~G~~k~~~~~~ 494 (494)
T 3ce6_A 482 DVEGPYKPDHYRY 494 (494)
T ss_dssp CTTSCCSCTTCCC
T ss_pred ccCCCCCcccCCC
Confidence 9999999999999
No 7
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=100.00 E-value=3.4e-95 Score=813.31 Aligned_cols=453 Identities=60% Similarity=0.946 Sum_probs=395.5
Q ss_pred CCCccchHhhhhhHHHHHhhCchHHHHHHHhccCCCCCCcEEEEEeeccHhHHHHHHHHHHCCCEEEEeecCCCCCHHHH
Q psy7896 1 MADIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVLIETLLELGAEVQWSSCNIFSTQDHA 80 (718)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~mp~l~~~~~~~~~~~pl~g~ri~~~lh~~~~ta~l~~~L~~~Ga~v~~~~~n~~stqd~~ 80 (718)
|+||+||+|||++|+||++|||+||++|++|+++|||+|+||++|+|||+||++|++||+++||+|+|++|||||||||+
T Consensus 37 v~d~~la~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~ri~~~lh~~~~ta~li~tL~~~GA~V~~~~~n~~stqd~~ 116 (494)
T 3d64_A 37 VADIALAGWGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIFSTQDHA 116 (494)
T ss_dssp CSCGGGHHHHHHHHHHHGGGCHHHHHHHHHTTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSSSCCCHHH
T ss_pred ecchhhhhHhHHHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEeCCcHHHHHHHHHHHhCCCEEEEEecCCcccchHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCeEEEecCCCHHHHHHHHHHHccCCCCCCceeEecCcchhHHHHHhhC-----hhhhhcccCCCcccchhHH
Q psy7896 81 AAAIAARGVAVYAWKGETDEEYVWCIEQTLVFPDGKPLNMILDDGGDLTNLVHEKY-----PQFLSEIRGISEETTTGVH 155 (718)
Q Consensus 81 aaal~~~gv~v~a~~~~~~~ey~~~~~~~~~~~~~~~~~~i~Ddggdl~~~~~~~~-----~~~~~~~~g~~eet~~g~~ 155 (718)
||||++.|||||||||||.+|||||++++|+|++|++|++|+|||||++.++|... +..+... ++..-+
T Consensus 117 aaal~~~gi~v~a~kget~~ey~~~~~~~l~~~~~~~p~~i~Ddggd~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 190 (494)
T 3d64_A 117 AAAIVEAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMILDDGGDATLLLILGSKAEKDRSVIARP------TNEEEV 190 (494)
T ss_dssp HHHHHHTTCCEECCTTCCHHHHHHHHHHTTCCSTTCCCCEEEESSSHHHHHHHHHHHHHHCGGGGTCC------CSHHHH
T ss_pred HHHHHhCCceEEEecCCCHHHHHHHHHHHhccccCCCCceeecCCcceeehhhccchhhccccccCCc------cchhHH
Confidence 99999999999999999999999999999999888767999999999999999332 2222211 110001
Q ss_pred hHHHHHhhcccCCCccccCCCCCccceeeecccccccccccccccccccccccccccchhhhhhhHHHHhcCCccceEEE
Q psy7896 156 NLYKMFKENKLGVPAINVNDSVTKPLNMILDDGGDLTNLVHEKYPQFLSEIRGISEETTTGVHNLYKMFKENKLGVPAIN 235 (718)
Q Consensus 156 ~~~~~~~~~~l~~p~~~~~~s~~k~~~~~~d~ggyf~~~~~~~~~~~~~~~~Gv~E~T~sG~~rl~~~~~~g~l~~Pv~~ 235 (718)
-||..+.+. +...+.+++.+.+++.|++|+|.+|++|++++.+.|.+-+|+.+
T Consensus 191 ~l~~~l~~~---------------------------la~~~~~~~~l~~~l~gi~eet~~Gvd~l~a~~~~Gilv~n~~~ 243 (494)
T 3d64_A 191 ALFKSIERH---------------------------LEIDGSWYSKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFN 243 (494)
T ss_dssp HHHHHHHHH---------------------------HTTCTTTTHHHHTTCCCEEECSHHHHHHHHHHHHTTCCCSCEEE
T ss_pred HHHHHHHHh---------------------------hccChHhHHHHhhCcEEEEEEcccCHhhHHHHHHCCCEEEECCC
Confidence 122222111 01112456677789999999999999999889999999999999
Q ss_pred ecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhh
Q psy7896 236 VNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEL 315 (718)
Q Consensus 236 v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L 315 (718)
+|+|..+..|+|.||++++++++|.+.
T Consensus 244 vn~sVae~l~r~~~~~~~~l~~gw~~~----------------------------------------------------- 270 (494)
T 3d64_A 244 VNDSVTKSKFDNLYGCRESLVDGIKRA----------------------------------------------------- 270 (494)
T ss_dssp CTTSHHHHHHHHHHHHHTTHHHHHHHH-----------------------------------------------------
T ss_pred ccHHHHHHHHhhhHhhhhhhhhhhhhc-----------------------------------------------------
Confidence 999999999999999998887766542
Q ss_pred hHHHHHHHHHHhcccccccchhhhhhhcccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec
Q psy7896 316 DEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT 395 (718)
Q Consensus 316 ~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~ 395 (718)
.+.++.||+|||||+|+||+.+|++|++|||+|+++|++|.+..++.+.|+.+.
T Consensus 271 --------------------------~g~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~ 324 (494)
T 3d64_A 271 --------------------------TDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVV 324 (494)
T ss_dssp --------------------------HCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEEC
T ss_pred --------------------------cccccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeC
Confidence 245788999999999999999999999999999999999877666677899999
Q ss_pred CHHHHhccCcEEEEcCCCCCCcCHHHHhcCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccCccccchhhHHHH
Q psy7896 396 TMEEAAKEGGIFVTTTGCKDIIRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTEALL 475 (718)
Q Consensus 396 ~Leell~~aDiIi~atgt~~lI~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e~~~~~eal~ 475 (718)
++++++++||+|+++++|+++|+++.|+.||+|++|||+||++.+||.++| + +++...+++.++++
T Consensus 325 ~l~ell~~aDiVi~~~~t~~lI~~~~l~~MK~gAilINvgrg~veID~~aL-~-AL~~g~I~~~~Dv~------------ 390 (494)
T 3d64_A 325 TMEYAADKADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVAST-R-QYQWENIKPQVDHI------------ 390 (494)
T ss_dssp CHHHHTTTCSEEEECSSSSCSBCHHHHHHCCTTEEEEECSSSSCSBCCGGG-T-TSEEEEEETTEEEE------------
T ss_pred CHHHHHhcCCEEEECCCcccccCHHHHhhCCCCcEEEEcCCCcchhchHHH-H-hhhcCccceeEEEE------------
Confidence 999999999999999999999999999999999999999999877899999 4 56666665555221
Q ss_pred hhhcccccccccccccCCcccccccccchhhcccchhhhHHHHhcChHHHHHHHHhcccccCCceEEEeeecchhhHHHH
Q psy7896 476 ATCNSLFKYSLVNTIHEAPTLLVHLSTDIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVL 555 (718)
Q Consensus 476 n~~~~~~~~nlv~~~h~~a~~~~Y~i~D~~La~~G~~kI~wa~~~MP~L~~Lr~~f~~~kpl~G~~i~~~lh~~~~Ta~L 555 (718)
T Consensus 391 -------------------------------------------------------------------------------- 390 (494)
T 3d64_A 391 -------------------------------------------------------------------------------- 390 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHcCCeEEeeccCcCCchHHHHHHHHhcCceEEEeeCCChHHHHHHHHHHhhcceecCCCCeEEEecCCccccccc
Q psy7896 556 IETLLELGAEVQWSSCNIFSTQDHAAAAIAARGVAVYAWKGETDEEYVWCIEQTLVDRYTLPNGNHIILLAEGRLVNLGC 635 (718)
Q Consensus 556 ~~~l~~~GA~v~~~~~nplstqd~vaaal~~~gi~v~a~~ge~~eey~~~~~~~l~~~~~~~~~~~~i~ddggdl~~~~~ 635 (718)
.+|++..+.....++++++.|
T Consensus 391 -----------------------------------------------------------plp~~~pL~~l~~~nvv~tH~ 411 (494)
T 3d64_A 391 -----------------------------------------------------------IFPDGKRVILLAEGRLVNLGC 411 (494)
T ss_dssp -----------------------------------------------------------ECTTSCEEEEEGGGSBHHHHT
T ss_pred -----------------------------------------------------------ECCCCCchhhcCCCCEEEEeC
Confidence 123444566665678899999
Q ss_pred cCCCCcceechhHHhHHHHHHHHHhccCCCCCceeeCChhhHHHHHHHhhhhcCcccccCCHHHHhhcCCCCCCCCCCCC
Q psy7896 636 AMGHPSFVMSNSFTNQVLAQIELWTKHSQYPVGVYMLPKKLDEEVAALHLEHLGVKLTKLTEDQAKYLGLPIEGPYKPDH 715 (718)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (718)
++|||+++|+.+|++|+++++++|.+...+++.||.||+++|++||.+||+++|+++++||++|++|++++.+|||||||
T Consensus 412 atg~~~~~~~~~~a~~~~~ni~~~~~g~~~~n~V~~lp~~~d~~va~l~L~~~g~~~~~l~~~q~~y~~v~~~g~~~~~~ 491 (494)
T 3d64_A 412 ATGHPSFVMSNSFTNQTLAQIELFTRGGEYANKVYVLPKHLDEKVARLHLARIGAQLSELSDDQAAYIGVSKAGPFKPDH 491 (494)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHHHHHHGGGSCSSEEECCHHHHHHHHHHHHTTTTCCCCCCCHHHHHHHTCCTTSCCSCTT
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCceeeCChhHHHHHHHHHHHHcCChHHhhChhhHHhEeeccCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q psy7896 716 YRY 718 (718)
Q Consensus 716 ~~~ 718 (718)
|||
T Consensus 492 ~~~ 494 (494)
T 3d64_A 492 YRY 494 (494)
T ss_dssp CCC
T ss_pred CCC
Confidence 999
No 8
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=1.2e-44 Score=398.32 Aligned_cols=134 Identities=57% Similarity=0.828 Sum_probs=128.0
Q ss_pred cccccchhhcccchhhhHHHHhcChHHHHHHHHhcccccCCceEEEeeecchhhHHHHHHHHHHcCCeEEeeccCcCCch
Q psy7896 498 VHLSTDIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVLIETLLELGAEVQWSSCNIFSTQ 577 (718)
Q Consensus 498 ~Y~i~D~~La~~G~~kI~wa~~~MP~L~~Lr~~f~~~kpl~G~~i~~~lh~~~~Ta~L~~~l~~~GA~v~~~~~nplstq 577 (718)
.|.|+|++|+++|+++|+||+++||+||+||++|..+|||+|+||++|||||+|||+|++||+++||+|+||||||||||
T Consensus 4 ~~~v~d~~la~~G~~~i~~ae~~MP~L~~~r~~~~~~kPl~G~rI~~~lH~t~~TavlietL~a~GAev~~~~cN~~STq 83 (464)
T 3n58_A 4 SMVVKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQ 83 (464)
T ss_dssp -CEESCGGGHHHHHHHHHHHHTTCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTCCC
T ss_pred CccccCchhHHHHHHHHHHHHhhCHHHHHHHHHHhccCCCCCCEEEEEEecHHHHHHHHHHHHHcCCeEEEecCCCCCCc
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCceEEEeeCCChHHHHHHHHHHhhcceecCC--CCeEEEecCCccccccc
Q psy7896 578 DHAAAAIAARGVAVYAWKGETDEEYVWCIEQTLVDRYTLPN--GNHIILLAEGRLVNLGC 635 (718)
Q Consensus 578 d~vaaal~~~gi~v~a~~ge~~eey~~~~~~~l~~~~~~~~--~~~~i~ddggdl~~~~~ 635 (718)
|||||||++.||+||||||||.||||||++++|+ |+| +||||+||||||+++.-
T Consensus 84 d~~aaal~~~gi~v~A~kget~eey~~~~~~~l~----~~~~~~p~~ilDDGgDl~~~~h 139 (464)
T 3n58_A 84 DHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQ----WPDGEPSNMILDDGGDATMYIL 139 (464)
T ss_dssp HHHHHHHHHTTCCEEECTTCCHHHHHHHHHHTTC----CTTSCCCSEEEESSSHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHHc----ccCCCCCCEEEECchHHHHHHH
Confidence 9999999999999999999999999999999994 454 49999999999998653
No 9
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=100.00 E-value=2.1e-44 Score=401.63 Aligned_cols=134 Identities=55% Similarity=0.829 Sum_probs=129.0
Q ss_pred ccccccchhhcccchhhhHHHHhcChHHHHHHHHhcccccCCceEEEeeecchhhHHHHHHHHHHcCCeEEeeccCcCCc
Q psy7896 497 LVHLSTDIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVLIETLLELGAEVQWSSCNIFST 576 (718)
Q Consensus 497 ~~Y~i~D~~La~~G~~kI~wa~~~MP~L~~Lr~~f~~~kpl~G~~i~~~lh~~~~Ta~L~~~l~~~GA~v~~~~~nplst 576 (718)
..|.|+|++|+++|+++|+||+++||+||.||++|..+|||+|+||++|||||+|||+|++||+++||+|+|||||||||
T Consensus 15 ~~~~v~d~~la~~g~~~i~~a~~~mp~l~~~r~~~~~~~pl~g~ri~~~lh~t~~ta~l~~tl~~~GA~v~~~~~n~~st 94 (488)
T 3ond_A 15 REYKVKDMSQADFGRLEIELAEVEMPGLMASRSEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFST 94 (488)
T ss_dssp CEEEESCGGGHHHHHHHHHHHHHTCHHHHHHHHHHGGGCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTCC
T ss_pred CcccccChhhhHHhhHHHHHHHhhCHHHHHHHHHHhcCCCCCCCEEEEEeccHHHHHHHHHHHHHcCCeEEEecCCCCCC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhcCceEEEeeCCChHHHHHHHHHHhhcceecCC--CCeEEEecCCcccccc
Q psy7896 577 QDHAAAAIAARGVAVYAWKGETDEEYVWCIEQTLVDRYTLPN--GNHIILLAEGRLVNLG 634 (718)
Q Consensus 577 qd~vaaal~~~gi~v~a~~ge~~eey~~~~~~~l~~~~~~~~--~~~~i~ddggdl~~~~ 634 (718)
||||||||++.||+||||||||+||||||++++|+ |+| +||||+||||||+++.
T Consensus 95 qd~~aaa~~~~g~~v~a~~ge~~~ey~~~~~~~l~----~~~~~~p~~i~Ddggd~~~~~ 150 (488)
T 3ond_A 95 QDHAAAAIARDSAAVFAWKGETLQEYWWCTERALD----WGPGGGPDLIVDDGGDTTLLI 150 (488)
T ss_dssp CHHHHHHHHHHTCEEEECTTCCHHHHHHHHHHHHC----CCTTCCCSEEEESSSHHHHHH
T ss_pred cHHHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHHh----cccCCCCCEEEECchHHHHHH
Confidence 99999999999999999999999999999999994 555 5999999999999865
No 10
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=100.00 E-value=5.5e-44 Score=393.30 Aligned_cols=133 Identities=66% Similarity=1.091 Sum_probs=126.8
Q ss_pred cccccchhhcccchhhhHHHHhcChHHHHHHHHhcccccCCceEEEeeecchhhHHHHHHHHHHcCCeEEeeccCcCCch
Q psy7896 498 VHLSTDIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVLIETLLELGAEVQWSSCNIFSTQ 577 (718)
Q Consensus 498 ~Y~i~D~~La~~G~~kI~wa~~~MP~L~~Lr~~f~~~kpl~G~~i~~~lh~~~~Ta~L~~~l~~~GA~v~~~~~nplstq 577 (718)
.|.|+|++|+++|+++|+||+++||+||+||++|..+|||+|+||++|||||+|||+|+++|+++||+|+||||||||||
T Consensus 2 ~~~v~d~~la~~g~~~i~~a~~~mp~l~~~r~~~~~~~pl~g~ri~~~lh~~~~Ta~l~~tL~~~GA~v~~~~~n~~stq 81 (436)
T 3h9u_A 2 MYKVRDISLAEWGRRELELAENEMPGLMELRREYGPSKPLKGAKIAGCLHMTMQTAVLIETLVELGAEVRWASCNIFSTQ 81 (436)
T ss_dssp -CEESCGGGHHHHHHHHHHHHHHCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTTCC
T ss_pred CccccChhhhHhhhHHHHHHHhhCHHHHHHHHHHhccCCCCCCEEEEEeccHHHHHHHHHHHHHcCCEEEEecCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCceEEEeeCCChHHHHHHHHHHh-hcceecCC--CCeEEEecCCcccccc
Q psy7896 578 DHAAAAIAARGVAVYAWKGETDEEYVWCIEQTL-VDRYTLPN--GNHIILLAEGRLVNLG 634 (718)
Q Consensus 578 d~vaaal~~~gi~v~a~~ge~~eey~~~~~~~l-~~~~~~~~--~~~~i~ddggdl~~~~ 634 (718)
|||||||++.||+||||||||+|||||||+++| + |++ +||||+||||||+++.
T Consensus 82 d~~aaal~~~gi~v~a~~ge~~~ey~~~~~~~l~~----~~~~~~p~~ilDdGgdl~~~~ 137 (436)
T 3h9u_A 82 DHAAAAIAKRGIPVFAWKGETEEEYMWCMKQTLKG----FSGDGYPNMLLDDGGDLTNYV 137 (436)
T ss_dssp HHHHHHHHHTTCCEEECTTCCHHHHHHHHHHTTSC----BTTTBCCSEEEESSSHHHHHH
T ss_pred HHHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHHHh----cccCCCCceEeccccHHHHHH
Confidence 999999999999999999999999999999998 4 343 5899999999998853
No 11
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=100.00 E-value=2.3e-43 Score=387.67 Aligned_cols=135 Identities=45% Similarity=0.774 Sum_probs=128.5
Q ss_pred cccccccchhhcccchhhhHHHHhcChHHHHHHHHhcccccCCceEEEeeecchhhHHHHHHHHHHcCCeEEeeccCcCC
Q psy7896 496 LLVHLSTDIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVLIETLLELGAEVQWSSCNIFS 575 (718)
Q Consensus 496 ~~~Y~i~D~~La~~G~~kI~wa~~~MP~L~~Lr~~f~~~kpl~G~~i~~~lh~~~~Ta~L~~~l~~~GA~v~~~~~npls 575 (718)
...|.|+|++|+++|+++|+||+++||+||.||++|..+|||+|+||++|+|||+|||+|+++|+++||+|+||||||||
T Consensus 11 ~~~~~v~d~~la~~g~~~i~~a~~~mp~l~~~r~~~~~~~pl~G~ri~~~lH~~~~Ta~l~~tL~~~GA~v~~~~~n~~s 90 (435)
T 3gvp_A 11 SSDFCVKNIKQAEFGRREIEIAEQEMPALMALRKRAQGEKPLAGAKIVGCTHITAQTAVLMETLGALGAQCRWAACNIYS 90 (435)
T ss_dssp CCCSBCSCGGGHHHHHHHHHHHHHTCHHHHHHHHHHSTTCTTTTCEEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSC
T ss_pred CCCccccChhhhHHhHHHHHHHHHhCHHHHHHHHHHhccCCCCCCEEEEEEccHHHHHHHHHHHHHCCCEEEEEecCCCc
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhcCceEEEeeCCChHHHHHHHHHHhhcceecCCCCeEEEecCCccccc
Q psy7896 576 TQDHAAAAIAARGVAVYAWKGETDEEYVWCIEQTLVDRYTLPNGNHIILLAEGRLVNL 633 (718)
Q Consensus 576 tqd~vaaal~~~gi~v~a~~ge~~eey~~~~~~~l~~~~~~~~~~~~i~ddggdl~~~ 633 (718)
|||||||||++.||+||||||||+|||||||+++|+. .+.+|+||+||||||+++
T Consensus 91 tqd~~aaal~~~gi~v~a~~g~~~~ey~~~~~~~~~~---~~~~p~~ilDdGgdl~~~ 145 (435)
T 3gvp_A 91 TLNEVAAALAESGFPVFAWKGESEDDFWWCIDRCVNV---EGWQPNMILDDGGDLTHW 145 (435)
T ss_dssp CCHHHHHHHHHHTCCEECCTTCCHHHHHHHHHHHHCB---TTBCCSEEEESSSHHHHH
T ss_pred ChHHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhc---cCCCCcEEEecchHHHHH
Confidence 9999999999999999999999999999999999941 234789999999999985
No 12
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=100.00 E-value=1.1e-42 Score=388.27 Aligned_cols=134 Identities=49% Similarity=0.848 Sum_probs=128.8
Q ss_pred cccccchhhcccchhhhHHHHhcChHHHHHHHHhcccccCCceEEEeeecchhhHHHHHHHHHHcCCeEEeeccCcCCch
Q psy7896 498 VHLSTDIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVLIETLLELGAEVQWSSCNIFSTQ 577 (718)
Q Consensus 498 ~Y~i~D~~La~~G~~kI~wa~~~MP~L~~Lr~~f~~~kpl~G~~i~~~lh~~~~Ta~L~~~l~~~GA~v~~~~~nplstq 577 (718)
.|.|+|++|+++|+++|+||+++||+||.||++|..+|||+|+||++|||||+|||+|++||+++||+|+||||||||||
T Consensus 5 ~~~v~d~~la~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~g~ri~~~lh~~~~ta~l~~tL~~~Ga~v~~~~~n~~stq 84 (479)
T 1v8b_A 5 KSKVKDISLAPFGKMQMEISENEMPGLMRIREEYGKDQPLKNAKITGCLHMTVECALLIETLQKLGAQIRWCSCNIYSTA 84 (479)
T ss_dssp CCBCSCGGGHHHHHHHHHHHGGGCHHHHHHHHHSTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CceecChhhhhHhHHHHHHHHhHCHHHHHHHHHhhccCCCCCCEEEEEeccHHHHHHHHHHHHHCCCEEEEecCCCCCch
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh-cCceEEEeeCCChHHHHHHHHHHhhcceecCC----CCeEEEecCCccccccc
Q psy7896 578 DHAAAAIAA-RGVAVYAWKGETDEEYVWCIEQTLVDRYTLPN----GNHIILLAEGRLVNLGC 635 (718)
Q Consensus 578 d~vaaal~~-~gi~v~a~~ge~~eey~~~~~~~l~~~~~~~~----~~~~i~ddggdl~~~~~ 635 (718)
|||||||++ .||+||||||||.||||||++++|+ |++ +|+||+||||||+++.-
T Consensus 85 d~~aaal~~~~gi~v~a~~g~~~~ey~~~~~~~l~----~~~~~~~~~~~i~ddggd~~~~~~ 143 (479)
T 1v8b_A 85 DYAAAAVSTLENVTVFAWKNETLEEYWWCVESALT----WGDGDDNGPDMIVDDGGDATLLVH 143 (479)
T ss_dssp HHHHHHHTTSTTEEEECCTTCCHHHHHHHHHHHHC----CSSSSSCSCSEEEESSSHHHHHHH
T ss_pred HHHHHHHhhcCCceEEEeCCCCHHHHHHHHHHHhc----CcccccCCCCEEEeccchHHHHHH
Confidence 999999998 7999999999999999999999994 444 69999999999998763
No 13
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=100.00 E-value=1.1e-42 Score=389.98 Aligned_cols=135 Identities=59% Similarity=0.909 Sum_probs=129.7
Q ss_pred ccccccchhhcccchhhhHHHHhcChHHHHHHHHhcccccCCceEEEeeecchhhHHHHHHHHHHcCCeEEeeccCcCCc
Q psy7896 497 LVHLSTDIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVLIETLLELGAEVQWSSCNIFST 576 (718)
Q Consensus 497 ~~Y~i~D~~La~~G~~kI~wa~~~MP~L~~Lr~~f~~~kpl~G~~i~~~lh~~~~Ta~L~~~l~~~GA~v~~~~~nplst 576 (718)
..|.|+|++|+++|+++|+||+++||+||.||++|..+|||+|+||++|||||+|||+|+++|+++||+|+|||||||||
T Consensus 18 ~~~~v~d~~la~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~g~~i~~~~h~~~~ta~l~~~l~~~ga~v~~~~~n~~st 97 (494)
T 3ce6_A 18 IDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFST 97 (494)
T ss_dssp EEEBCSCGGGHHHHHHHHHHHHHHCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTCC
T ss_pred CceeecChhhhHHhHHHHHHHHHHCHHHHHHHHHhhccCCCCCCEEEEEeecHHHHHHHHHHHHHCCCeEEEeecCCCCc
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhc---------CceEEEeeCCChHHHHHHHHHHhhcceecCC--CC-eEEEecCCccccccc
Q psy7896 577 QDHAAAAIAAR---------GVAVYAWKGETDEEYVWCIEQTLVDRYTLPN--GN-HIILLAEGRLVNLGC 635 (718)
Q Consensus 577 qd~vaaal~~~---------gi~v~a~~ge~~eey~~~~~~~l~~~~~~~~--~~-~~i~ddggdl~~~~~ 635 (718)
||||||||++. ||+||||||||.||||||++++|+ |++ +| +||+||||||+++.-
T Consensus 98 qd~~aaa~~~~~~~~~~~~~g~~v~a~~g~~~~~y~~~~~~~~~----~~~~~~~~~~i~ddggd~~~~~~ 164 (494)
T 3ce6_A 98 QDHAAAAVVVGPHGTPDEPKGVPVFAWKGETLEEYWWAAEQMLT----WPDPDKPANMILDDGGDATMLVL 164 (494)
T ss_dssp CHHHHHHHHHCSSCCSSSCCSCCEECCTTCCHHHHHHHHHHHHC----CSSTTSCCCEEEESSSHHHHHHH
T ss_pred hHHHHHHHhhhccccccCCCCeEEEEeCCCCHHHHHHHHHHHHh----ccccCCCceEEeecchHHHHHHH
Confidence 99999999988 999999999999999999999994 555 68 999999999998864
No 14
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=100.00 E-value=2.2e-38 Score=354.67 Aligned_cols=135 Identities=54% Similarity=0.785 Sum_probs=129.5
Q ss_pred ccccccchhhcccchhhhHHHHhcChHHHHHHHHhcccccCCceEEEeeecchhhHHHHHHHHHHcCCeEEeeccCcCCc
Q psy7896 497 LVHLSTDIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMTVQTAVLIETLLELGAEVQWSSCNIFST 576 (718)
Q Consensus 497 ~~Y~i~D~~La~~G~~kI~wa~~~MP~L~~Lr~~f~~~kpl~G~~i~~~lh~~~~Ta~L~~~l~~~GA~v~~~~~nplst 576 (718)
..|.|+|++|+++|+++|+||+++||+||.||++|..+|||+|+||++|+|+|.+|++|+++|+++||+|+|+|||||||
T Consensus 33 ~~~~v~d~~la~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~ri~~~lh~~~~ta~li~tL~~~GA~V~~~~~n~~st 112 (494)
T 3d64_A 33 QDYVVADIALAGWGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIFST 112 (494)
T ss_dssp CCCBCSCGGGHHHHHHHHHHHGGGCHHHHHHHHHTTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSSSCC
T ss_pred CCceecchhhhhHhHHHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEeCCcHHHHHHHHHHHhCCCEEEEEecCCccc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhcCceEEEeeCCChHHHHHHHHHHhhcceecCC--CCeEEEecCCccccccc
Q psy7896 577 QDHAAAAIAARGVAVYAWKGETDEEYVWCIEQTLVDRYTLPN--GNHIILLAEGRLVNLGC 635 (718)
Q Consensus 577 qd~vaaal~~~gi~v~a~~ge~~eey~~~~~~~l~~~~~~~~--~~~~i~ddggdl~~~~~ 635 (718)
|||+||||++.||+||||||||.||||||++++|+ |++ +|++|+||||||+++-.
T Consensus 113 qd~~aaal~~~gi~v~a~kget~~ey~~~~~~~l~----~~~~~~p~~i~Ddggd~~~~~~ 169 (494)
T 3d64_A 113 QDHAAAAIVEAGTPVFAFKGESLDEYWEFSHRIFE----WPNGEFANMILDDGGDATLLLI 169 (494)
T ss_dssp CHHHHHHHHHTTCCEECCTTCCHHHHHHHHHHTTC----CSTTCCCCEEEESSSHHHHHHH
T ss_pred chHHHHHHHhCCceEEEecCCCHHHHHHHHHHHhc----cccCCCCceeecCCcceeehhh
Confidence 99999999999999999999999999999999994 444 58999999999998765
No 15
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=99.89 E-value=5.6e-23 Score=223.87 Aligned_cols=259 Identities=17% Similarity=0.087 Sum_probs=171.0
Q ss_pred CcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHHHHHHHHHhcccccccchhhhhhhcccccC
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAG 348 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~G 348 (718)
-|-|...|.|...++.. +++++|+.|+.+.......+..++.++.+. + .+..+.++.|
T Consensus 62 Lk~I~~~~~G~D~iD~~-~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~----------l-----------~r~~g~~l~g 119 (381)
T 3oet_A 62 INFVGTATAGTDHVDEA-WLKQAGIGFSAAPGCNAIAVVEYVFSALLM----------L-----------AERDGFSLRD 119 (381)
T ss_dssp CCEEEESSSCCTTBCHH-HHHHTTCEEECCTTTTHHHHHHHHHHHHHH----------H-----------HHHTTCCGGG
T ss_pred CEEEEEccccccccCHH-HHHhCCEEEEECCCcCcchhHHHHHHHHHH----------H-----------HHhcCCccCC
Confidence 34455555555555544 678999999965443333322222222211 1 1123678999
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----C----CCCCcCHH
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----G----CKDIIRGE 420 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----g----t~~lI~~e 420 (718)
|||||||+|+||+.+|+++++|||+|+++|+.+ . ....+..+.++++++++||+|++++ . |+++|+++
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~--~--~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~ 195 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPR--A--ARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADET 195 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHH--H--HTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCh--H--HhccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHH
Confidence 999999999999999999999999999997532 1 1124566789999999999999873 3 88999999
Q ss_pred HHhcCCCCeEEEEcCCCCccccHHHHhc----c-----ccceeeecCC---------cccCccccchhhHHHHhhhcc--
Q psy7896 421 HFLQMRDDAIVCNIGHFDCEIQVSWLDK----N-----AVEKVNVKPQ---------VSPTSRTKHLTTEALLATCNS-- 480 (718)
Q Consensus 421 ~l~~MK~gAiLIN~GRgd~Eid~~aL~~----~-----~l~~~~v~P~---------V~v~s~e~~~~~eal~n~~~~-- 480 (718)
.|+.||+|++|||+|||. .+|.++|.+ . ++|+++.+|. +..|||.+.++.|+..+....
T Consensus 196 ~l~~mk~gailIN~aRG~-vvde~aL~~aL~~g~i~gA~LDV~e~EP~~~~~L~~~~~i~TPHiag~t~e~~~~~~~~~~ 274 (381)
T 3oet_A 196 LIRRLKPGAILINACRGP-VVDNAALLARLNAGQPLSVVLDVWEGEPDLNVALLEAVDIGTSHIAGYTLEGKARGTTQVF 274 (381)
T ss_dssp HHHHSCTTEEEEECSCGG-GBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHHHSSEECSSCTTCCHHHHHHHHHHHH
T ss_pred HHhcCCCCcEEEECCCCc-ccCHHHHHHHHHhCCCeEEEeeccccCCCCcchhhhCCEEECCccCcCcHHHHHHHHHHHH
Confidence 999999999999999996 467655543 2 3688877764 336788888777765443211
Q ss_pred -----ccc----cccccc-ccCC-c----------------cccccccc-c-hhhcccchhhhHHHHhcChHHHHHHHHh
Q psy7896 481 -----LFK----YSLVNT-IHEA-P----------------TLLVHLST-D-IKLAEWGRKTIIMAENEMPGLMALRRKY 531 (718)
Q Consensus 481 -----~~~----~nlv~~-~h~~-a----------------~~~~Y~i~-D-~~La~~G~~kI~wa~~~MP~L~~Lr~~f 531 (718)
++. .++-.+ |... + ....|+++ | ..|-. .+ ..-..|+.|||+|
T Consensus 275 ~~l~~~l~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~l~~~~~~~yd~~~d~~~~r~----~~----~~~~~Fd~lRk~y 346 (381)
T 3oet_A 275 EAYSAFIGREQRVALETLLPAPEFGRITLHGPLDQPTLKRLAHLVYDVRRDDAPLRK----VA----GIPGEFDKLRKNY 346 (381)
T ss_dssp HHHHHHTTCCCCCCHHHHSCCCSCCEEEECSCCCHHHHHHHHHHHCCTHHHHHHHHH----HT----TSTTHHHHHHHTC
T ss_pred HHHHHHHcCCccccccccCCCcCccceecCCCCCHHHHHHHHHHhCChHHHHHHHHH----hc----cCcchHHHHhcCC
Confidence 111 111110 1000 0 01344443 2 22211 00 1334699999999
Q ss_pred cccccCCceEEEeeecchhhHHHHHHHHHHcCCeEEe
Q psy7896 532 GAQKILKGARIAGCLHMTVQTAVLIETLLELGAEVQW 568 (718)
Q Consensus 532 ~~~kpl~G~~i~~~lh~~~~Ta~L~~~l~~~GA~v~~ 568 (718)
..+++|+..+|... .......|.++|+++..
T Consensus 347 ~~rre~~~~~~~~~------~~~~~~~l~~lgf~~~~ 377 (381)
T 3oet_A 347 LERREWSSLYVMCD------DETAAALLCKLGFNAVH 377 (381)
T ss_dssp CCCCCGGGSEEEES------SHHHHHHHHHHTCEEEE
T ss_pred CccccccceEEecC------cHHHHHHHHHcCCeeec
Confidence 99999999988752 23567899999999873
No 16
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=99.89 E-value=6.7e-23 Score=219.97 Aligned_cols=223 Identities=16% Similarity=0.091 Sum_probs=145.3
Q ss_pred CcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhh--hhhHHHHHHHHHHhcccccccchhhhhhhcccc
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGY--ELDEEVAALHLEHLGVKLTKLTEDQAKYLDIML 346 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf--~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL 346 (718)
-|-|...|.|....+.. +++++|+.|+.+.......+..++.++ .+.|++....-. ++...|. ++..+.+.++
T Consensus 65 Lk~I~~~~~G~d~id~~-~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~---~~~~~~~-~~~~~~~~~l 139 (334)
T 3kb6_A 65 LKLIHTRSVGFDHIDLD-YCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDR---VKKLNFS-QDSEILAREL 139 (334)
T ss_dssp CCEEEESSSCCTTBCHH-HHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHH---HHTTCCC-CCGGGCBCCG
T ss_pred CcEEEECCcccchhcHH-HHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhcccccccc---ccccccc-ccccccccee
Confidence 45566666666666554 679999999976554444444433333 333443222211 1111111 2234568999
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEc----CCCCCCcCHHHH
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTT----TGCKDIIRGEHF 422 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~a----tgt~~lI~~e~l 422 (718)
.||||||||+|+||+.+|+++++|||+|++||+.+... ....++...+++|++++||||+++ ..|+|+|+++.|
T Consensus 140 ~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~--~~~~~~~~~~l~ell~~sDivslh~Plt~~T~~li~~~~l 217 (334)
T 3kb6_A 140 NRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRED--LKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERI 217 (334)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHH
T ss_pred cCcEEEEECcchHHHHHHHhhcccCceeeecCCccchh--hhhcCceecCHHHHHhhCCEEEEcCCCChhhccCcCHHHH
Confidence 99999999999999999999999999999998765432 234577889999999999999986 468999999999
Q ss_pred hcCCCCeEEEEcCCCCccccHHHHhcc---------ccceeeecCCcccCccccchhhHHHHhhhcccccccccccccCC
Q psy7896 423 LQMRDDAIVCNIGHFDCEIQVSWLDKN---------AVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLVNTIHEA 493 (718)
Q Consensus 423 ~~MK~gAiLIN~GRgd~Eid~~aL~~~---------~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~h~~ 493 (718)
++||+|++|||+|||. -+|.++|.+. ++|+++.+|...-.........+........+-.+|++.|||.+
T Consensus 218 ~~mk~~a~lIN~aRG~-iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~~~L~~~~nvilTPHia 296 (334)
T 3kb6_A 218 SLMKDGVYLINTARGK-VVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIA 296 (334)
T ss_dssp HHSCTTEEEEECSCGG-GBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCT
T ss_pred hhcCCCeEEEecCccc-cccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccccccchhhccCCCEEECCchh
Confidence 9999999999999996 5777666553 23444444322100000000001111111223347999999988
Q ss_pred cccccc
Q psy7896 494 PTLLVH 499 (718)
Q Consensus 494 a~~~~Y 499 (718)
+.+...
T Consensus 297 ~~T~ea 302 (334)
T 3kb6_A 297 YYTDKS 302 (334)
T ss_dssp TCBHHH
T ss_pred hChHHH
Confidence 765443
No 17
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=99.88 E-value=7.6e-23 Score=225.10 Aligned_cols=246 Identities=15% Similarity=0.143 Sum_probs=163.6
Q ss_pred CcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhcccc
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLDIML 346 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL 346 (718)
-|-|...|.|....++. +++++|+.|+.+.......+..++.+ +.+.|++....... +.+.|. +..+.+.++
T Consensus 81 Lk~I~~~~~G~d~IDl~-~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~---~~g~W~--~~~~~~~el 154 (416)
T 3k5p_A 81 LIAVGCFSVGTNQVELK-AARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSA---HAGGWE--KTAIGSREV 154 (416)
T ss_dssp CCEEEECSSCCTTBCHH-HHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHH---HTTCCC--CCCTTCCCS
T ss_pred cEEEEECccccCccCHH-HHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhh---hccccc--ccCCCCccC
Confidence 45555556666555554 67999999997654444444433333 34445543332111 111221 122447899
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----CCCCCcCHHHH
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----GCKDIIRGEHF 422 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----gt~~lI~~e~l 422 (718)
+||||||||+|+||+.+|+++++|||+|++||+++..... ....+.++++++++||+|+++. .|+++|+++.|
T Consensus 155 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~~---~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l 231 (416)
T 3k5p_A 155 RGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQYG---NVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKL 231 (416)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCCBT---TBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhccc---CcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHH
Confidence 9999999999999999999999999999999887643211 1124568999999999999873 47899999999
Q ss_pred hcCCCCeEEEEcCCCCccccHHHHhc----c-----ccceeeecC---------------CcccCccccchhhHHHHhhh
Q psy7896 423 LQMRDDAIVCNIGHFDCEIQVSWLDK----N-----AVEKVNVKP---------------QVSPTSRTKHLTTEALLATC 478 (718)
Q Consensus 423 ~~MK~gAiLIN~GRgd~Eid~~aL~~----~-----~l~~~~v~P---------------~V~v~s~e~~~~~eal~n~~ 478 (718)
+.||+|++|||+|||. .+|.++|.+ . ++|+++.+| +|..+||.+.++.|+..+.
T Consensus 232 ~~mk~gailIN~aRG~-vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~- 309 (416)
T 3k5p_A 232 RKMKKGAFLINNARGS-DVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQERI- 309 (416)
T ss_dssp HHSCTTEEEEECSCTT-SBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHHHHH-
T ss_pred hhCCCCcEEEECCCCh-hhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHHHHH-
Confidence 9999999999999996 467655544 2 356665544 3556677777777666553
Q ss_pred cccccccccccccCCcccccccccchhhccc-chhhhHHHHhcChHHH
Q psy7896 479 NSLFKYSLVNTIHEAPTLLVHLSTDIKLAEW-GRKTIIMAENEMPGLM 525 (718)
Q Consensus 479 ~~~~~~nlv~~~h~~a~~~~Y~i~D~~La~~-G~~kI~wa~~~MP~L~ 525 (718)
......|+..|..++.+....+..+++|+.. |..|+-..+++.|+..
T Consensus 310 ~~~~~~nl~~~l~~g~~~~~Vn~p~~~~~~~~~~~r~~~~h~n~p~~~ 357 (416)
T 3k5p_A 310 GTEVTRKLVEYSDVGSTVGAVNFPQVQLPPRPTGTRFMHVHENRPGIL 357 (416)
T ss_dssp HHHHHHHHHHHHHHCCCTTBSSSCCCCCCCCSSSEEEEEEECCCTTHH
T ss_pred HHHHHHHHHHHHhhCCCCceeeCCCcCCCCCCCceEEEEEecCCccHH
Confidence 3333455566655555555555566666554 6667878888888874
No 18
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=99.87 E-value=7.2e-22 Score=215.29 Aligned_cols=261 Identities=17% Similarity=0.162 Sum_probs=172.4
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHHHHHHHHHhcccccccchhhhhhhccccc
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLA 347 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~ 347 (718)
..|-|...|.|....+.. +++++|+.|+.+.......+..++.+..+ .+. +..+.++.
T Consensus 58 ~Lk~I~~~~~G~D~iD~~-~~~~~gI~v~n~pg~~~~~vAE~~l~~lL----------~l~-----------r~~~~~l~ 115 (380)
T 2o4c_A 58 PVRFVGTCTIGTDHLDLD-YFAEAGIAWSSAPGCNARGVVDYVLGCLL----------AMA-----------EVRGADLA 115 (380)
T ss_dssp CCCEEEECSSCSTTBCHH-HHHHHTCEEECCTTTTHHHHHHHHHHHHH----------HHH-----------HHHTCCGG
T ss_pred CceEEEEcCcccchhhHH-HHHhCCCEEEeCCCcChHHHHHHHHHHHH----------HHH-----------hhhhcccC
Confidence 456666666666666654 67899999996544333332222222211 111 11257899
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----C----CCCCcCH
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----G----CKDIIRG 419 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----g----t~~lI~~ 419 (718)
|+||||||+|+||+.+|++|++||++|+++|+.+... ..|....++++++++||+|+++. . |+++|++
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~ 191 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR----EPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDE 191 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH----STTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh----ccCcccCCHHHHHHhCCEEEEeccCccccccchhhhcCH
Confidence 9999999999999999999999999999997644211 24556679999999999999873 3 8899999
Q ss_pred HHHhcCCCCeEEEEcCCCCccccHHHHhc----c-----ccceeeecC---------CcccCccccchhhHHHHhhhc--
Q psy7896 420 EHFLQMRDDAIVCNIGHFDCEIQVSWLDK----N-----AVEKVNVKP---------QVSPTSRTKHLTTEALLATCN-- 479 (718)
Q Consensus 420 e~l~~MK~gAiLIN~GRgd~Eid~~aL~~----~-----~l~~~~v~P---------~V~v~s~e~~~~~eal~n~~~-- 479 (718)
+.|+.||+|++|||+|||. .+|.++|.+ . ++|+++.+| ++..|||.+.++.|+..+...
T Consensus 192 ~~l~~mk~gailIN~sRG~-vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~~~~l~~~nvi~TPHiag~t~e~~~~~~~~~ 270 (380)
T 2o4c_A 192 PRLAALRPGTWLVNASRGA-VVDNQALRRLLEGGADLEVALDVWEGEPQADPELAARCLIATPHIAGYSLEGKLRGTAQI 270 (380)
T ss_dssp HHHHTSCTTEEEEECSCGG-GBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHTTCSEECSSCTTCCHHHHHHHHHHH
T ss_pred HHHhhCCCCcEEEECCCCc-ccCHHHHHHHHHhCCCceEEeeeeccCCCCchhhccCCEEEccccCcCCHHHHHHHHHHH
Confidence 9999999999999999985 466554443 2 367777776 566889998887765443211
Q ss_pred -----cccc----ccccccccCCc----------c---------ccccccc-c-hhhcccchhhhHHHHhcCh---HHHH
Q psy7896 480 -----SLFK----YSLVNTIHEAP----------T---------LLVHLST-D-IKLAEWGRKTIIMAENEMP---GLMA 526 (718)
Q Consensus 480 -----~~~~----~nlv~~~h~~a----------~---------~~~Y~i~-D-~~La~~G~~kI~wa~~~MP---~L~~ 526 (718)
.++. .++..+++..+ . ...|+++ | ..|-. .+ ...... .|+.
T Consensus 271 ~~nl~~~l~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~yd~~~dd~~~r~----~~--~~~~~~~~~~Fd~ 344 (380)
T 2o4c_A 271 YQAYCAWRGIAERVSLQDVLPETWLAGLQLNPGCDPAWALATLCRAVYDPRSDDAAFRR----SL--TGDSATRRAAFDA 344 (380)
T ss_dssp HHHHHHHHTCCCCCCGGGTCCCCSEEEEEECTTCCHHHHHHHHHHHHCCTHHHHHHHHH----TT--SSCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCccchhhcCCCCccceeccccccchHHHHHHHHHHhCCcHhHHHHHHh----hc--cCCccchhhhHHH
Confidence 1111 12222211111 0 1245554 2 23311 11 001111 5999
Q ss_pred HHHHhcccccCCceEEEeeecchhhHHHHHHHHHHcCCeE
Q psy7896 527 LRRKYGAQKILKGARIAGCLHMTVQTAVLIETLLELGAEV 566 (718)
Q Consensus 527 Lr~~f~~~kpl~G~~i~~~lh~~~~Ta~L~~~l~~~GA~v 566 (718)
|||+|..+++|...+|..| ........|.++|+++
T Consensus 345 lR~~y~~rre~~~~~~~~~-----~~~~~~~~l~~lgf~~ 379 (380)
T 2o4c_A 345 LRKHYPPRREITGLRVATG-----GQAELQRVVRALGAQL 379 (380)
T ss_dssp HHHTCCCCCCGGGCEEECT-----TCHHHHHHHHHHTCEE
T ss_pred HhcCCCccccccceEEecC-----CcHHHHHHHHHcCCcc
Confidence 9999999999999998652 3344578899999985
No 19
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.87 E-value=8.5e-22 Score=211.05 Aligned_cols=227 Identities=12% Similarity=0.016 Sum_probs=151.0
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhccc
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLDIM 345 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~e 345 (718)
.-|-|...|.|....+.. +++++|+.|+.+.......+..++.+ +.+.|++...+-. ++.+.|..|+....+.+
T Consensus 67 ~Lk~I~~~~~G~d~id~~-~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~---~~~g~w~~~~~~~~~~~ 142 (330)
T 4e5n_A 67 ELRVIGCALKGFDNFDVD-ACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAF---VRSGKFRGWQPRFYGTG 142 (330)
T ss_dssp TCCEEEESSSCCTTBCHH-HHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHH---HHTTCCCSCCSCCCCCC
T ss_pred CCcEEEECCCcccccCHH-HHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHH---HHhCCccccCccccCCc
Confidence 345566666666666654 67899999997755444444444444 3344554332211 12233443444556899
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----CCCCCcCHHH
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----GCKDIIRGEH 421 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----gt~~lI~~e~ 421 (718)
+.||||||||+|+||+.+|+++++|||+|+++|+++.....+...|+...++++++++||+|+++. .|+++|+++.
T Consensus 143 l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~ 222 (330)
T 4e5n_A 143 LDNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAEL 222 (330)
T ss_dssp STTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHH
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHH
Confidence 999999999999999999999999999999999887443334445777789999999999999873 5789999999
Q ss_pred HhcCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccCccccchhhH-HHHhhhcccccccccccccCCcccccc
Q psy7896 422 FLQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTE-ALLATCNSLFKYSLVNTIHEAPTLLVH 499 (718)
Q Consensus 422 l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e~~~~~e-al~n~~~~~~~~nlv~~~h~~a~~~~Y 499 (718)
|+.||+|++|||+|||. .+|.++|.+..-+.......+||++.|+.+..+ ++......+-.+|++.|||.++.+...
T Consensus 223 l~~mk~gailIN~arg~-~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~t~e~ 300 (330)
T 4e5n_A 223 LALVRPGALLVNPCRGS-VVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRAV 300 (330)
T ss_dssp HTTSCTTEEEEECSCGG-GBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTCCHHH
T ss_pred HhhCCCCcEEEECCCCc-hhCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCChHHH
Confidence 99999999999999996 477666655311111112334555444211100 000111122237999999988765443
No 20
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.87 E-value=1.6e-21 Score=210.14 Aligned_cols=218 Identities=16% Similarity=0.081 Sum_probs=146.1
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhh-hhhhcc
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQ-AKYLDI 344 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~-~~~~g~ 344 (718)
.-|-|...|.|....+.. +++++|+.|+.+.......+...+-+ +.+.|++....-. ++.+.|..+. ..+.|.
T Consensus 94 ~Lk~I~~~~~G~D~id~~-~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~---~r~g~W~~~~~~~~~g~ 169 (345)
T 4g2n_A 94 GLKTIATLSVGYDHIDMA-AARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRM---VRSGSWPGWGPTQLLGM 169 (345)
T ss_dssp TCCEEEESSSCCTTBCHH-HHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHH---HHTTCCCCCCTTTTCBC
T ss_pred CceEEEEcCCcccccCHH-HHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHH---HHcCCCcccCccccccc
Confidence 345566666666666654 67999999997765444444444434 3445655333211 1222333222 234589
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec-CHHHHhccCcEEEEcC----CCCCCcCH
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT-TMEEAAKEGGIFVTTT----GCKDIIRG 419 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~-~Leell~~aDiIi~at----gt~~lI~~ 419 (718)
++.||||||||+|+||+.+|+++++|||+|+++|+++.....+ .|.... ++++++++||+|+++. .|+++|++
T Consensus 170 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~ 247 (345)
T 4g2n_A 170 GLTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE--EGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDH 247 (345)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH--TTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCH
T ss_pred ccCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh--cCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCH
Confidence 9999999999999999999999999999999999877543322 266665 8999999999999874 37899999
Q ss_pred HHHhcCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccCccccchhhHHHHhhhcccccccccccccCCcccccc
Q psy7896 420 EHFLQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLVNTIHEAPTLLVH 499 (718)
Q Consensus 420 e~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~h~~a~~~~Y 499 (718)
+.|+.||+|++|||+|||. -+|.++|.+..-+.......+||++.|.+ .. .+.+-.+|++.|||.++.+...
T Consensus 248 ~~l~~mk~gailIN~aRG~-~vde~aL~~aL~~g~i~gA~LDVf~~EP~-~~------~pL~~~~nvilTPHia~~t~e~ 319 (345)
T 4g2n_A 248 DRIAKIPEGAVVINISRGD-LINDDALIEALRSKHLFAAGLDVFANEPA-ID------PRYRSLDNIFLTPHIGSATHET 319 (345)
T ss_dssp HHHHHSCTTEEEEECSCGG-GBCHHHHHHHHHHTSEEEEEESCCTTTTS-CC------TTGGGCTTEEECCSCTTCBHHH
T ss_pred HHHhhCCCCcEEEECCCCc-hhCHHHHHHHHHhCCceEEEecCCCCCCC-CC------chHHhCCCEEEcCccCcCCHHH
Confidence 9999999999999999996 47766665421111111223344433321 11 1223338999999988765444
No 21
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.86 E-value=9.5e-22 Score=216.02 Aligned_cols=169 Identities=12% Similarity=0.086 Sum_probs=117.5
Q ss_pred CcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhcccc
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLDIML 346 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL 346 (718)
-|-|...|.|...+++. +++++|+.|+.+.......+..++-+ +.+.|++....-.. +.+.|. +..+.+.++
T Consensus 70 Lk~I~~~~~G~d~iD~~-~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~---~~g~W~--~~~~~~~el 143 (404)
T 1sc6_A 70 LVAIGAFAIGTNQVDLD-AAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKA---HRGVGN--KLAAGSFEA 143 (404)
T ss_dssp CCEEEECSSCCTTBCHH-HHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHH---HHTCCC-------CCCS
T ss_pred CcEEEECCcccCccCHH-HHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHH---HcCCcc--ccCCCcccc
Confidence 44555555555555554 67999999997655444444443334 34456553332111 111221 223458899
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEc----CCCCCCcCHHH
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTT----TGCKDIIRGEH 421 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~a----tgt~~lI~~e~ 421 (718)
.||||||||+|+||+.+|+++++|||+|++||+.+.... .+... .+++|++++||+|+++ ..|+++|+++.
T Consensus 144 ~gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~----~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~ 219 (404)
T 1sc6_A 144 RGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLPL----GNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKE 219 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCC----TTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHH
T ss_pred CCCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhcc----CCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHH
Confidence 999999999999999999999999999999987664321 23443 4899999999999997 35789999999
Q ss_pred HhcCCCCeEEEEcCCCCccccHHHHhc
Q psy7896 422 FLQMRDDAIVCNIGHFDCEIQVSWLDK 448 (718)
Q Consensus 422 l~~MK~gAiLIN~GRgd~Eid~~aL~~ 448 (718)
|+.||+|++|||+||+. .+|.++|.+
T Consensus 220 l~~mk~ga~lIN~aRg~-~vd~~aL~~ 245 (404)
T 1sc6_A 220 ISLMKPGSLLINASRGT-VVDIPALAD 245 (404)
T ss_dssp HHHSCTTEEEEECSCSS-SBCHHHHHH
T ss_pred HhhcCCCeEEEECCCCh-HHhHHHHHH
Confidence 99999999999999996 466554443
No 22
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.86 E-value=4.5e-21 Score=207.10 Aligned_cols=221 Identities=13% Similarity=0.039 Sum_probs=145.1
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhccc
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLDIM 345 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~e 345 (718)
.-|-|...|.|...++.. +++++|+.|+.+.......+...+-+ +.+.|++...+-. ++.+.|........+.+
T Consensus 86 ~Lk~i~~~g~G~d~id~~-~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~---~~~g~W~~~~~~~~~~~ 161 (351)
T 3jtm_A 86 NLKLLLTAGIGSDHIDLQ-AAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQ---VVKGEWNVAGIAYRAYD 161 (351)
T ss_dssp SCCEEEESSSCCTTBCHH-HHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHH---HHTTCCCHHHHHTTCCC
T ss_pred CCeEEEEeCeeecccCHH-HHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHH---HHcCCCccccccCCccc
Confidence 345566666666555554 66899999997655444333333333 3445655333311 12223322111234789
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec-CHHHHhccCcEEEEc----CCCCCCcCHH
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT-TMEEAAKEGGIFVTT----TGCKDIIRGE 420 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~-~Leell~~aDiIi~a----tgt~~lI~~e 420 (718)
|.||||||||+|+||+.+|+++++|||+|+++|+++.....+...|+... ++++++++||+|+++ ..|+++|+++
T Consensus 162 l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~ 241 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKE 241 (351)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHH
T ss_pred ccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHH
Confidence 99999999999999999999999999999999987754433444576655 899999999999986 3588999999
Q ss_pred HHhcCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccCccccchhhHHHHhhhcccccccccccccCCcccccc
Q psy7896 421 HFLQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLVNTIHEAPTLLVH 499 (718)
Q Consensus 421 ~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~h~~a~~~~Y 499 (718)
.|+.||+|++|||+|||. .+|.++|.+..-+.......+||++.|..- ...+.+-.+|++.|||.++.+...
T Consensus 242 ~l~~mk~gailIN~aRG~-~vde~aL~~aL~~g~i~ga~lDV~~~EP~~------~~~pL~~~~nvilTPHia~~t~ea 313 (351)
T 3jtm_A 242 LIGKLKKGVLIVNNARGA-IMERQAVVDAVESGHIGGYSGDVWDPQPAP------KDHPWRYMPNQAMTPHTSGTTIDA 313 (351)
T ss_dssp HHHHSCTTEEEEECSCGG-GBCHHHHHHHHHHTSEEEEEESCCSSSSCC------TTCGGGTSTTBCCCCSCGGGSHHH
T ss_pred HHhcCCCCCEEEECcCch-hhCHHHHHHHHHhCCccEEEeCCCCCCCCC------CCChhhcCCCEEECCcCCCCCHHH
Confidence 999999999999999996 477666654211111111233333333211 111223347999999987665444
No 23
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.85 E-value=6.3e-21 Score=206.91 Aligned_cols=209 Identities=15% Similarity=0.117 Sum_probs=136.0
Q ss_pred ecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhh--hhhHHHHHHHHHHhcccccccchhh-hhhhcccccCcEEE
Q psy7896 276 GYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGY--ELDEEVAALHLEHLGVKLTKLTEDQ-AKYLDIMLAGKVAV 352 (718)
Q Consensus 276 GyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf--~L~r~i~~~~l~~lgv~~~~~~~~~-~~~~g~eL~GktVG 352 (718)
|+.++++. +++++|+.|+.+.......+...+-++ .+.|++....- .++.+.|.|.. ..+.+.++.|||||
T Consensus 107 G~d~iD~~---~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~---~~r~g~~~w~~~~~~~~~~l~gktvG 180 (365)
T 4hy3_A 107 LLNNMPYE---VLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADI---AFQEGTELWGGEGNASARLIAGSEIG 180 (365)
T ss_dssp CCSCSCTT---HHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHH---HHHHTCCCCSSSSTTSCCCSSSSEEE
T ss_pred ccCcccHH---HHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHH---HHHcCCccccccccccccccCCCEEE
Confidence 34455554 459999999976443333333333333 33344322110 01111221111 13458899999999
Q ss_pred EEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEc----CCCCCCcCHHHHhcCCCC
Q psy7896 353 VAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTT----TGCKDIIRGEHFLQMRDD 428 (718)
Q Consensus 353 IIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~a----tgt~~lI~~e~l~~MK~g 428 (718)
|||+|+||+.+|+++++|||+|++||+++. ...+...|+...++++++++||+|+++ ..|+++|+++.|+.||+|
T Consensus 181 IIGlG~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~g 259 (365)
T 4hy3_A 181 IVGFGDLGKALRRVLSGFRARIRVFDPWLP-RSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRG 259 (365)
T ss_dssp EECCSHHHHHHHHHHTTSCCEEEEECSSSC-HHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTT
T ss_pred EecCCcccHHHHHhhhhCCCEEEEECCCCC-HHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCC
Confidence 999999999999999999999999988753 233345688888999999999999986 357899999999999999
Q ss_pred eEEEEcCCCCccccHHHHhccccceeeecCCcccCccccchhhHHHHhhhcccccccccccccCCcccccc
Q psy7896 429 AIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLVNTIHEAPTLLVH 499 (718)
Q Consensus 429 AiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~h~~a~~~~Y 499 (718)
++|||+|||. .+|.++|.+.. +...+...+||++.|..- ...+.+-.+|++.|||.++.+...
T Consensus 260 ailIN~aRG~-~vde~aL~~aL-~~g~i~aaLDV~~~EPl~------~~~pL~~~~nvilTPHia~~t~e~ 322 (365)
T 4hy3_A 260 AAFILLSRAD-VVDFDALMAAV-SSGHIVAASDVYPEEPLP------LDHPVRSLKGFIRSAHRAGALDSA 322 (365)
T ss_dssp CEEEECSCGG-GSCHHHHHHHH-HTTSSEEEESCCSSSSCC------TTCGGGTCTTEEECCSCSSCCHHH
T ss_pred cEEEECcCCc-hhCHHHHHHHH-HcCCceEEeeCCCCCCCC------CCChhhcCCCEEECCccccCHHHH
Confidence 9999999996 47777666531 111122345555554211 111223348999999988765443
No 24
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=99.85 E-value=2.9e-21 Score=207.99 Aligned_cols=249 Identities=12% Similarity=0.056 Sum_probs=153.1
Q ss_pred cEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhccc-ccccchhhhhhhcccc
Q psy7896 270 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVK-LTKLTEDQAKYLDIML 346 (718)
Q Consensus 270 k~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~-~~~~~~~~~~~~g~eL 346 (718)
|-|...|.|....+.. +++++|+.|+.+.......+...+-+ +.+.|++....-. ++ .+.|. |+..+.+.++
T Consensus 72 k~I~~~~~G~d~id~~-~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~---~~~~g~~~-w~~~~~~~~l 146 (343)
T 2yq5_A 72 KCIGLRIVGFNTINFD-WTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYR---MDHDHDFT-WPSNLISNEI 146 (343)
T ss_dssp CEEEESSSCCTTBCSS-TTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHH---HHHHCCCC-CCGGGCBCCG
T ss_pred eEEEECceeecccchh-HHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHH---HHHcCCcc-cccCCCcccc
Confidence 5555566665555543 56899999997654433333333333 3445654332211 11 11222 3245678999
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----CCCCCcCHHHH
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----GCKDIIRGEHF 422 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----gt~~lI~~e~l 422 (718)
.||||||||+|+||+.+|+++++|||+|++||+++... ...+....++++++++||+|+++. .|+++|+++.|
T Consensus 147 ~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l 223 (343)
T 2yq5_A 147 YNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE---FEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQL 223 (343)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG---GTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHH
T ss_pred CCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh---hhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHH
Confidence 99999999999999999999999999999999887542 234566779999999999999873 57999999999
Q ss_pred hcCCCCeEEEEcCCCCccccHHHHhcc---------ccceeeecCCcccCc-cccchhhHHHHhh-hccccccccccccc
Q psy7896 423 LQMRDDAIVCNIGHFDCEIQVSWLDKN---------AVEKVNVKPQVSPTS-RTKHLTTEALLAT-CNSLFKYSLVNTIH 491 (718)
Q Consensus 423 ~~MK~gAiLIN~GRgd~Eid~~aL~~~---------~l~~~~v~P~V~v~s-~e~~~~~eal~n~-~~~~~~~nlv~~~h 491 (718)
+.||+|++|||+|||. .+|.++|.+. ++|+++.+|...+.. +.. +.+.+. .+.+-.+|++.|||
T Consensus 224 ~~mk~gailIN~aRg~-~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~----~~l~~~~~pL~~~~nvilTPH 298 (343)
T 2yq5_A 224 KEMKKSAYLINCARGE-LVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTD----SEIPEDYKTLAKMPNVVITPH 298 (343)
T ss_dssp HHSCTTCEEEECSCGG-GBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCT----TTSCHHHHHHTTCTTEEECSS
T ss_pred hhCCCCcEEEECCCCh-hhhHHHHHHHHHcCCCcEEEecccccCCCccccccccc----cccccchhHHhcCCCEEECCc
Confidence 9999999999999996 4776666542 245554444210000 000 001110 11233489999999
Q ss_pred CCcccccccccchhhcccchhhhHHHHhcChHHHHHHHHhcccccCCceEEEeeec
Q psy7896 492 EAPTLLVHLSTDIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLH 547 (718)
Q Consensus 492 ~~a~~~~Y~i~D~~La~~G~~kI~wa~~~MP~L~~Lr~~f~~~kpl~G~~i~~~lh 547 (718)
.++.+..... ++ ..-.+.+|++-+..+.|.-=+....+.|
T Consensus 299 ia~~t~ea~~-----------~~-----~~~~~~ni~~~l~g~~~~~~v~~~~~~~ 338 (343)
T 2yq5_A 299 SAFYTETSIR-----------NM-----VQICLTDQLTIAKGGRPRSIVNLTASGH 338 (343)
T ss_dssp CTTCBHHHHH-----------HH-----HHHHHHHHHHHHTTCCCTTBC-------
T ss_pred cccchHHHHH-----------HH-----HHHHHHHHHHHHcCCCCCceECCccCCc
Confidence 8876544411 00 0113456666666666655555555544
No 25
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.85 E-value=5e-21 Score=205.46 Aligned_cols=223 Identities=16% Similarity=0.078 Sum_probs=147.9
Q ss_pred CcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhcccc
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLDIML 346 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL 346 (718)
-|-|...|.|....+.. +++++|+.|+.+.......+..++-+ +.+.|++....-. ++.+.|.+ .....+.+|
T Consensus 65 Lk~I~~~~~G~d~id~~-~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~---~~~g~w~~-~~~~~~~~l 139 (334)
T 2pi1_A 65 LKLIHTRSVGFDHIDLD-YCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDR---VKKLNFSQ-DSEILAREL 139 (334)
T ss_dssp CCEEEESSSCCTTBCHH-HHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHH---HTTTCCCC-CGGGCBCCG
T ss_pred CeEEEECCccccccCHH-HHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHH---HHcCCCcc-ccCccceec
Confidence 45566666666666554 67999999997654433333333333 3344554333211 11222221 113458899
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEc----CCCCCCcCHHHH
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTT----TGCKDIIRGEHF 422 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~a----tgt~~lI~~e~l 422 (718)
.||||||||+|+||+.+|+++++|||+|++||+++..... ..|+...++++++++||+|+++ ..|+++|+++.|
T Consensus 140 ~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~--~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l 217 (334)
T 2pi1_A 140 NRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK--EKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERI 217 (334)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH--HTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHH
T ss_pred cCceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH--hcCceecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHH
Confidence 9999999999999999999999999999999988765432 3578888999999999999987 358899999999
Q ss_pred hcCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccCccccchhhHH---------HHhhhcccccccccccccCC
Q psy7896 423 LQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTEA---------LLATCNSLFKYSLVNTIHEA 493 (718)
Q Consensus 423 ~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e~~~~~ea---------l~n~~~~~~~~nlv~~~h~~ 493 (718)
+.||+|++|||+|||. .+|.++|.+..-+.......+||++.|...+.+. .....+.+-.+|++.|||.+
T Consensus 218 ~~mk~gailIN~aRg~-~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilTPHia 296 (334)
T 2pi1_A 218 SLMKDGVYLINTARGK-VVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIA 296 (334)
T ss_dssp HHSCTTEEEEECSCGG-GBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCT
T ss_pred hhCCCCcEEEECCCCc-ccCHHHHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEECCccc
Confidence 9999999999999996 4776666553111111123344454443321110 01112233348999999988
Q ss_pred cccccc
Q psy7896 494 PTLLVH 499 (718)
Q Consensus 494 a~~~~Y 499 (718)
+.+...
T Consensus 297 ~~t~e~ 302 (334)
T 2pi1_A 297 YYTDKS 302 (334)
T ss_dssp TCBHHH
T ss_pred cChHHH
Confidence 765444
No 26
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.83 E-value=7.8e-21 Score=203.23 Aligned_cols=217 Identities=16% Similarity=0.063 Sum_probs=139.1
Q ss_pred CcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhcccc
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLDIML 346 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL 346 (718)
-|-|...|.|....+.. +++++|+.|+.+.......+..++-+ +.+.|++...+ +...+.+. |.....+.++
T Consensus 62 Lk~I~~~~~G~d~id~~-~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~--~~~~~~~~---W~~~~~~~~l 135 (324)
T 3evt_A 62 LKFVQVISAGVDYLPLK-ALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAW--LNQRGARQ---WALPMTTSTL 135 (324)
T ss_dssp CCEEECSSSCCTTSCHH-HHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHH--HHHTTTCC---SSCSSCCCCS
T ss_pred ceEEEECCccccccCHH-HHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHH--HHHHhcCC---cccCCCCccc
Confidence 34444455555555554 67899999997654333333333333 33345443331 01111122 2222258899
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----CCCCCcCHHHH
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----GCKDIIRGEHF 422 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----gt~~lI~~e~l 422 (718)
.||||||||+|+||+.+|++|++|||+|+++|+++.... .....+...++++++++||+|+++. .|+++|+++.|
T Consensus 136 ~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l 214 (324)
T 3evt_A 136 TGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPAD-HFHETVAFTATADALATANFIVNALPLTPTTHHLFSTELF 214 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCT-TCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHH
T ss_pred cCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhH-hHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHH
Confidence 999999999999999999999999999999998775421 1122344568999999999999873 46899999999
Q ss_pred hcCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccCccccchhhHHHHhhhcccccccccccccCCcccccc
Q psy7896 423 LQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLVNTIHEAPTLLVH 499 (718)
Q Consensus 423 ~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~h~~a~~~~Y 499 (718)
+.||+|++|||+|||. .+|.++|.+..-+.......+||++.|.. ....+.+-.+|++.|||.++.+..+
T Consensus 215 ~~mk~gailIN~aRG~-~vd~~aL~~aL~~g~i~gA~lDV~~~EPl------~~~~pL~~~~nvilTPHia~~t~~~ 284 (324)
T 3evt_A 215 QQTKQQPMLINIGRGP-AVDTTALMTALDHHQLSMAALDVTEPEPL------PTDHPLWQRDDVLITPHISGQIAHF 284 (324)
T ss_dssp HTCCSCCEEEECSCGG-GBCHHHHHHHHHTTSCSEEEESSCSSSSC------CTTCGGGGCSSEEECCSCTTCCCCH
T ss_pred hcCCCCCEEEEcCCCh-hhhHHHHHHHHHhCCceEEEeCCCCCCCC------CCCChhhcCCCEEEcCccccChHHH
Confidence 9999999999999996 47766655421111111123344433321 1112233348999999988776544
No 27
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.83 E-value=1.8e-20 Score=202.53 Aligned_cols=210 Identities=15% Similarity=0.111 Sum_probs=140.8
Q ss_pred CCcEEEEEecCC----CChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccch-----
Q psy7896 268 AGKVAVVAGYGD----VGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTE----- 336 (718)
Q Consensus 268 ~Gk~vvViGyG~----vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~----- 336 (718)
.-|-|...|.|. ..++.. +++++|+.|+.+... ...+...+-+ +.+.|++....-.. +.+.|..
T Consensus 71 ~Lk~I~~~g~G~~~~~d~id~~-~a~~~gI~V~n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~~---~~g~W~~~~~~~ 145 (352)
T 3gg9_A 71 KLKIISQTGRVSRDAGGHIDLE-ACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRIPQYVASL---KHGAWQQSGLKS 145 (352)
T ss_dssp TCCEEEESSCCCCSSSCSBCHH-HHHHHTCEEECCCCC-SHHHHHHHHHHHHHHHTTHHHHHHHH---HTTCTTCCCCCC
T ss_pred CCeEEEEeCcccCCccCcccHH-HHHhCCeEEEECCCC-cHHHHHHHHHHHHHHHhhHHHHHHHH---HcCCCCcccccc
Confidence 345566667776 555554 568999999975544 4444433334 34445543332111 1122211
Q ss_pred --hh-hhhhcccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec-CHHHHhccCcEEEEc--
Q psy7896 337 --DQ-AKYLDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT-TMEEAAKEGGIFVTT-- 410 (718)
Q Consensus 337 --~~-~~~~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~-~Leell~~aDiIi~a-- 410 (718)
|. ....+.+|.||||||||+|+||+.+|+++++|||+|++||+++. ...+...|+... ++++++++||+|+++
T Consensus 146 ~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~~~~~g~~~~~~l~ell~~aDiV~l~~P 224 (352)
T 3gg9_A 146 TTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENS-KERARADGFAVAESKDALFEQSDVLSVHLR 224 (352)
T ss_dssp TTSCTTTTSBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHH-HHHHHHTTCEECSSHHHHHHHCSEEEECCC
T ss_pred cccccccccCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCC-HHHHHhcCceEeCCHHHHHhhCCEEEEecc
Confidence 11 11358899999999999999999999999999999999987652 223445687776 899999999999986
Q ss_pred --CCCCCCcCHHHHhcCCCCeEEEEcCCCCccccHHHHhc----c-----ccceeeecCCcccCccccchhhHHHHhhhc
Q psy7896 411 --TGCKDIIRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDK----N-----AVEKVNVKPQVSPTSRTKHLTTEALLATCN 479 (718)
Q Consensus 411 --tgt~~lI~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~----~-----~l~~~~v~P~V~v~s~e~~~~~eal~n~~~ 479 (718)
..|+++|+++.|+.||+|++|||+|||. -+|.++|.+ . ++|+++.+|.- . ..+
T Consensus 225 lt~~t~~li~~~~l~~mk~gailIN~aRg~-~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~---------~------~~p 288 (352)
T 3gg9_A 225 LNDETRSIITVADLTRMKPTALFVNTSRAE-LVEENGMVTALNRGRPGMAAIDVFETEPIL---------Q------GHT 288 (352)
T ss_dssp CSTTTTTCBCHHHHTTSCTTCEEEECSCGG-GBCTTHHHHHHHHTSSSEEEECCCSSSCCC---------S------CCG
T ss_pred CcHHHHHhhCHHHHhhCCCCcEEEECCCch-hhcHHHHHHHHHhCCccEEEecccCCCCCC---------C------CCh
Confidence 3478999999999999999999999986 356554443 2 23444444421 1 112
Q ss_pred ccccccccccccCCcccccc
Q psy7896 480 SLFKYSLVNTIHEAPTLLVH 499 (718)
Q Consensus 480 ~~~~~nlv~~~h~~a~~~~Y 499 (718)
.+-.+|++.|||.++.+...
T Consensus 289 L~~~~nvilTPHia~~t~e~ 308 (352)
T 3gg9_A 289 LLRMENCICTPHIGYVERES 308 (352)
T ss_dssp GGGCTTEEECCSCTTCBHHH
T ss_pred hhcCCCEEECCCCCCCCHHH
Confidence 22337999999987665443
No 28
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.82 E-value=7.6e-20 Score=196.77 Aligned_cols=215 Identities=13% Similarity=0.089 Sum_probs=131.8
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhh--hhhHHHHHHHHHHhcccccccchhhhhhhccc
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGY--ELDEEVAALHLEHLGVKLTKLTEDQAKYLDIM 345 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf--~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~e 345 (718)
.-|-|...|.|....+.. +++++|+.|+.+.......+...+-++ .+.|++....-. ++.+.|........+.+
T Consensus 93 ~Lk~I~~~g~G~d~id~~-~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~---~~~g~W~~~~~~~~~~~ 168 (340)
T 4dgs_A 93 SLGIIAINGVGTDKVDLA-RARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRL---VREGRWAAGEQLPLGHS 168 (340)
T ss_dssp SCCEEEEESSCCTTBCHH-HHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHH---HHTTCC------CCCCC
T ss_pred CCEEEEECCCCccccCHH-HHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHH---HhcCCcccccCcCcccc
Confidence 356777777777777765 779999999976654444444444443 344554332211 11122221101124789
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-ecCHHHHhccCcEEEEcC----CCCCCcCHH
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-VTTMEEAAKEGGIFVTTT----GCKDIIRGE 420 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v~~Leell~~aDiIi~at----gt~~lI~~e 420 (718)
+.||||||||+|+||+.+|+++++||++|+++|+++... .++. ..+++|++++||+|+++. .|+++|+++
T Consensus 169 l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~-----~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~ 243 (340)
T 4dgs_A 169 PKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG-----VDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDAS 243 (340)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT-----SCCEECSSHHHHHHTCSEEEECC----------CHH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc-----cCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHH
Confidence 999999999999999999999999999999999877542 2333 468999999999999873 478999999
Q ss_pred HHhcCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccCccccchhhHHHHhhhcccccccccccccCCcccccc
Q psy7896 421 HFLQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLVNTIHEAPTLLVH 499 (718)
Q Consensus 421 ~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~h~~a~~~~Y 499 (718)
.|+.||++++|||+|||. .+|.++|.+..-+.......+||++.|... .+++.+ .+|++.|||.++.+...
T Consensus 244 ~l~~mk~gailIN~aRG~-vvde~aL~~aL~~g~i~gA~LDVf~~EP~~-~~~L~~------~~nvilTPHia~~t~e~ 314 (340)
T 4dgs_A 244 LLQALGPEGIVVNVARGN-VVDEDALIEALKSGTIAGAGLDVFVNEPAI-RSEFHT------TPNTVLMPHQGSATVET 314 (340)
T ss_dssp HHHHTTTTCEEEECSCC---------------CCSSEEEESCCSSSSSC-CSHHHH------SSSEEECSSCSSCCHHH
T ss_pred HHhcCCCCCEEEECCCCc-ccCHHHHHHHHHcCCceEEEeCCcCCCCCC-ccchhh------CCCEEEcCcCCcCCHHH
Confidence 999999999999999996 467666655311111112234444444211 123333 38999999988765444
No 29
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.82 E-value=1.7e-19 Score=193.64 Aligned_cols=208 Identities=17% Similarity=0.154 Sum_probs=142.9
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhccc
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLDIM 345 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~e 345 (718)
.-|-|...|.|....+.. +++++|+.|+.+.......+...+-+ +.+.|++....-. ++.+.|. +..+.+.+
T Consensus 89 ~Lk~I~~~~~G~d~id~~-~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~---~~~g~W~--~~~~~~~~ 162 (335)
T 2g76_A 89 KLQVVGRAGTGVDNVDLE-AATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATAS---MKDGKWE--RKKFMGTE 162 (335)
T ss_dssp SCCEEEESSSSCTTBCHH-HHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHH---HHTTCCC--TGGGCBCC
T ss_pred CCcEEEECCCCcchhChH-HHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHH---HHcCCCC--ccCCCCcC
Confidence 356666666666666654 66899999997654433333333333 3444554332211 1112221 12345789
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----CCCCCcCHHH
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----GCKDIIRGEH 421 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----gt~~lI~~e~ 421 (718)
+.||||||||+|+||+.+|+++++||++|+++|+++... .+...|....++++++++||+|+++. .|+++|+++.
T Consensus 163 l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~ 241 (335)
T 2g76_A 163 LNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE-VSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNT 241 (335)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH-HHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBCHHH
T ss_pred CCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhCHHH
Confidence 999999999999999999999999999999999876543 34456777779999999999999872 4789999999
Q ss_pred HhcCCCCeEEEEcCCCCccccHHHHhcc---------ccceeeecCCcccCccccchhhHHHHhhhcccccccccccccC
Q psy7896 422 FLQMRDDAIVCNIGHFDCEIQVSWLDKN---------AVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLVNTIHE 492 (718)
Q Consensus 422 l~~MK~gAiLIN~GRgd~Eid~~aL~~~---------~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~h~ 492 (718)
|+.||+|++|||+||+. .+|.++|.+. ++|++..+|.. ..++.+ .+|++.|||.
T Consensus 242 l~~mk~gailIN~arg~-vvd~~aL~~aL~~g~i~gA~lDV~~~EP~~----------~~~L~~------~~nvilTPH~ 304 (335)
T 2g76_A 242 FAQCKKGVRVVNCARGG-IVDEGALLRALQSGQCAGAALDVFTEEPPR----------DRALVD------HENVISCPHL 304 (335)
T ss_dssp HTTSCTTEEEEECSCTT-SBCHHHHHHHHHHTSEEEEEESCCSSSSCS----------CCHHHH------STTEEECSSC
T ss_pred HhhCCCCcEEEECCCcc-ccCHHHHHHHHHhCCccEEEEeecCCCCCC----------CchHHh------CCCEEECCcC
Confidence 99999999999999986 4665554432 23444444421 112222 3799999998
Q ss_pred Ccccccc
Q psy7896 493 APTLLVH 499 (718)
Q Consensus 493 ~a~~~~Y 499 (718)
++.+...
T Consensus 305 ~~~t~e~ 311 (335)
T 2g76_A 305 GASTKEA 311 (335)
T ss_dssp TTCBHHH
T ss_pred CCCCHHH
Confidence 8765443
No 30
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.81 E-value=1.8e-19 Score=197.33 Aligned_cols=212 Identities=13% Similarity=-0.020 Sum_probs=142.5
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhccc
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLDIM 345 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~e 345 (718)
.-|-|...|.|...+++. +++++|+.|+.+.......+..++-+ +.+.|++...+-. ++.+.|........+.+
T Consensus 113 ~Lk~I~~~g~G~d~iD~~-aa~~~gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~---~~~g~W~~~~~~~~~~~ 188 (393)
T 2nac_A 113 NLKLALTAGIGSDHVDLQ-SAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEW---ARKGGWNIADCVSHAYD 188 (393)
T ss_dssp TCCEEEESSSCCTTBCHH-HHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHH---HHTTCCCHHHHHTTCCC
T ss_pred CCcEEEEcCccccccCHH-HHhcCCEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHH---HHcCCCCccccccCCcc
Confidence 456666667776666664 66899999998754443333333333 3344544222211 11222321111224789
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEc----CCCCCCcCHH
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTT----TGCKDIIRGE 420 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~a----tgt~~lI~~e 420 (718)
|.||||||||+|+||+.+|+++++|||+|+++|+++.....+...|... .++++++++||+|+++ ..|+++|+++
T Consensus 189 l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~ 268 (393)
T 2nac_A 189 LEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDE 268 (393)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHH
T ss_pred CCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhhHH
Confidence 9999999999999999999999999999999998765443333456665 5899999999999987 3578999999
Q ss_pred HHhcCCCCeEEEEcCCCCccccHHHHhcc---------ccceeeecCCcccCccccchhhHHHHhhhccccccccccccc
Q psy7896 421 HFLQMRDDAIVCNIGHFDCEIQVSWLDKN---------AVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLVNTIH 491 (718)
Q Consensus 421 ~l~~MK~gAiLIN~GRgd~Eid~~aL~~~---------~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~h 491 (718)
.|+.||+|++|||+||+. .+|.++|.+. ++|++..+|.. .....+-.+|++.|||
T Consensus 269 ~l~~mk~gailIN~aRG~-~vde~aL~~aL~~g~i~gA~lDV~~~EP~~---------------~~~pL~~~~nvilTPH 332 (393)
T 2nac_A 269 TLKLFKRGAYIVNTARGK-LCDRDAVARALESGRLAGYAGDVWFPQPAP---------------KDHPWRTMPYNGMTPH 332 (393)
T ss_dssp HHTTSCTTEEEEECSCGG-GBCHHHHHHHHHTTSEEEEEESCCSSSSCC---------------TTCGGGTSTTBCCCCS
T ss_pred HHhhCCCCCEEEECCCch-HhhHHHHHHHHHcCCeeEEEEEecCCCCCC---------------CCChhHcCCCEEECCC
Confidence 999999999999999985 4665555442 23444444421 1111223479999999
Q ss_pred CCcccccc
Q psy7896 492 EAPTLLVH 499 (718)
Q Consensus 492 ~~a~~~~Y 499 (718)
.++.+...
T Consensus 333 ia~~T~e~ 340 (393)
T 2nac_A 333 ISGTTLTA 340 (393)
T ss_dssp CTTCSHHH
T ss_pred CCcCcHHH
Confidence 88765443
No 31
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.81 E-value=2.2e-19 Score=194.67 Aligned_cols=221 Identities=14% Similarity=0.042 Sum_probs=142.9
Q ss_pred CCcEEEEEecCCCChhHHHHHHhc--CCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhc
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLF--GSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLD 343 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~--Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g 343 (718)
.-|-|...|.|...++.. +++++ |+.|+.+.......+...+-+ +.+.|++...+.. ++.+.|........+
T Consensus 84 ~Lk~I~~~~~G~d~id~~-~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~---~~~g~W~~~~~~~~~ 159 (364)
T 2j6i_A 84 KLKLVVVAGVGSDHIDLD-YINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQ---IINHDWEVAAIAKDA 159 (364)
T ss_dssp TCCEEEESSSCCTTBCHH-HHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHH---HHTTCCCHHHHHTTC
T ss_pred CCeEEEECCcccccccHH-HHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHH---HHhCCCCcCcccCCc
Confidence 356677777777777664 66788 999998765444444433333 3344544322211 111223211112347
Q ss_pred ccccCcEEEEEecChhHHHHHHHHHhCCCE-EEEEecCCccHHHHhhcCceec-CHHHHhccCcEEEEcC----CCCCCc
Q psy7896 344 IMLAGKVAVVAGYGDVGKGCAQSLRLFGSR-VIVTEIDPINALQASMEGYEVT-TMEEAAKEGGIFVTTT----GCKDII 417 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~vA~~l~~fGa~-Viv~d~dp~~al~a~~~G~~v~-~Leell~~aDiIi~at----gt~~lI 417 (718)
.++.|+||||||+|+||+.+|+++++|||+ |+++|+++.....+...|.... ++++++++||+|+++. .|+++|
T Consensus 160 ~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li 239 (364)
T 2j6i_A 160 YDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLI 239 (364)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCB
T ss_pred ccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHh
Confidence 899999999999999999999999999997 9999987754433344566554 8999999999999873 477999
Q ss_pred CHHHHhcCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccCccccchhhHHHHhhhccccc--c---cccccccC
Q psy7896 418 RGEHFLQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFK--Y---SLVNTIHE 492 (718)
Q Consensus 418 ~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~--~---nlv~~~h~ 492 (718)
+++.|+.||++++|||+||+. .+|.++|.+..-+.......+||++.|..-...++. .. + |++.|||.
T Consensus 240 ~~~~l~~mk~ga~lIn~arG~-~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~------~~~~~~~~nvilTPHi 312 (364)
T 2j6i_A 240 NKELLSKFKKGAWLVNTARGA-ICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWR------DMRNKYGAGNAMTPHY 312 (364)
T ss_dssp CHHHHTTSCTTEEEEECSCGG-GBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHH------HCCCTTSCCEEECCSC
T ss_pred CHHHHhhCCCCCEEEECCCCc-hhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHH------hccCCccCcEEECCcc
Confidence 999999999999999999985 466665554211111111223333333211111121 12 4 89999998
Q ss_pred Ccccccc
Q psy7896 493 APTLLVH 499 (718)
Q Consensus 493 ~a~~~~Y 499 (718)
++.+...
T Consensus 313 a~~t~e~ 319 (364)
T 2j6i_A 313 SGTTLDA 319 (364)
T ss_dssp GGGSHHH
T ss_pred CcCCHHH
Confidence 8765444
No 32
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=99.81 E-value=1.4e-19 Score=193.95 Aligned_cols=222 Identities=14% Similarity=0.121 Sum_probs=144.9
Q ss_pred CcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhcccc
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLDIML 346 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL 346 (718)
-|-|...|.|....+.. +++++|+.|+.+.......+..++-+ +.+.|++....-. ++.+.|. |...+.+.++
T Consensus 69 Lk~I~~~~~G~d~id~~-~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~---~~~g~w~-~~~~~~~~~l 143 (333)
T 1dxy_A 69 IKFLTIRNVGTDNIDMT-AMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQ---LQAGDYE-KAGTFIGKEL 143 (333)
T ss_dssp CCEEEESSSCCTTBCHH-HHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHH---HHTTCHH-HHTCCCCCCG
T ss_pred ceEEEEcCcccCccCHH-HHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHH---HHcCCcc-cccCCCccCC
Confidence 45566666666666654 66899999997654333333333333 3344544322211 1111221 1133467899
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----CCCCCcCHHHH
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----GCKDIIRGEHF 422 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----gt~~lI~~e~l 422 (718)
.|+||||||+|+||+.+|+++++|||+|+++|+++.... ..+....++++++++||+|+++. .|+++|+++.|
T Consensus 144 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~---~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l 220 (333)
T 1dxy_A 144 GQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGD---HPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAF 220 (333)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSC---CTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchhh---HhccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHH
Confidence 999999999999999999999999999999998775431 12355679999999999999873 37899999999
Q ss_pred hcCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccCccccchhhHHH-----Hhh--hcccccccccccccCCcc
Q psy7896 423 LQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTEAL-----LAT--CNSLFKYSLVNTIHEAPT 495 (718)
Q Consensus 423 ~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e~~~~~eal-----~n~--~~~~~~~nlv~~~h~~a~ 495 (718)
+.||+|++|||+||+. .+|.++|.+..-+.......+||++.|...+.+.. .+. ...+-.+|++.|||.++.
T Consensus 221 ~~mk~ga~lIn~srg~-~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~TPHia~~ 299 (333)
T 1dxy_A 221 NLMKPGAIVINTARPN-LIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAYY 299 (333)
T ss_dssp HHSCTTEEEEECSCTT-SBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEECSSCTTC
T ss_pred hhCCCCcEEEECCCCc-ccCHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEECCccccC
Confidence 9999999999999996 47776666532122222234555555543221110 000 112334899999998876
Q ss_pred cccc
Q psy7896 496 LLVH 499 (718)
Q Consensus 496 ~~~Y 499 (718)
+...
T Consensus 300 t~e~ 303 (333)
T 1dxy_A 300 TETA 303 (333)
T ss_dssp SHHH
T ss_pred hHHH
Confidence 5443
No 33
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.80 E-value=3.8e-20 Score=197.97 Aligned_cols=210 Identities=14% Similarity=0.040 Sum_probs=132.3
Q ss_pred cEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhh--hhhHHHHHHHHHHhcccccccchhhhhhhccccc
Q psy7896 270 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGY--ELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLA 347 (718)
Q Consensus 270 k~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf--~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~ 347 (718)
|-|...|.|....+.. +++ .|+.|+.+.......+..++-++ .+.|++....-. ++.+. |. ...+.++.
T Consensus 69 k~I~~~~~G~d~id~~-~~~-~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~---~~~g~---W~-~~~~~~l~ 139 (324)
T 3hg7_A 69 SWFQSTYAGVDVLLDA-RCR-RDYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQ---QKQRL---WQ-SHPYQGLK 139 (324)
T ss_dssp CEEEESSSCCGGGSCT-TSC-CSSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHH---HHTTC---CC-CCCCCCST
T ss_pred eEEEECCCCCCccChH-HHh-CCEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHH---HhhCC---Cc-CCCCcccc
Confidence 4444445555444433 334 48888866544333333333333 334544332211 11112 22 23578999
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEc----CCCCCCcCHHHHh
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTT----TGCKDIIRGEHFL 423 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~a----tgt~~lI~~e~l~ 423 (718)
||||||||+|+||+.+|+++++|||+|+++|+++.... ....++...++++++++||+|+++ ..|+++|+++.|+
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~ 218 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERA-GFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFE 218 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCT-TCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTT
T ss_pred cceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhh-hhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHh
Confidence 99999999999999999999999999999998774321 112233456899999999999986 3578999999999
Q ss_pred cCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccCccccchhhHHHHhhhcccccccccccccCCccc
Q psy7896 424 QMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLVNTIHEAPTL 496 (718)
Q Consensus 424 ~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~h~~a~~ 496 (718)
.||+|++|||+|||. .+|.++|.+..-+.......+||++.|.. ....+.+-.+|++.|||.++.+
T Consensus 219 ~mk~gailIN~aRG~-~vde~aL~~aL~~g~i~ga~lDV~~~EPl------~~~~pL~~~~nvilTPHia~~t 284 (324)
T 3hg7_A 219 HCKPGAILFNVGRGN-AINEGDLLTALRTGKLGMAVLDVFEQEPL------PADSPLWGQPNLIITPHNSAYS 284 (324)
T ss_dssp CSCTTCEEEECSCGG-GBCHHHHHHHHHTTSSSEEEESCCSSSSC------CTTCTTTTCTTEEECCSCSSCC
T ss_pred cCCCCcEEEECCCch-hhCHHHHHHHHHcCCceEEEeccCCCCCC------CCCChhhcCCCEEEeCCCcccc
Confidence 999999999999996 47766655421111111122333333311 1111223348999999987654
No 34
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.80 E-value=3.8e-19 Score=188.55 Aligned_cols=209 Identities=17% Similarity=0.185 Sum_probs=141.8
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhccc
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLDIM 345 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~e 345 (718)
.-|-|...|.|....+.. +++++|+.|+.+.......+..++-+ +.+.|++...... ++.+.|. +..+.+.+
T Consensus 66 ~Lk~I~~~~~G~d~id~~-~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~---~~~g~w~--~~~~~~~~ 139 (307)
T 1wwk_A 66 KLKVIARAGVGLDNIDVE-AAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRK---MREGVWA--KKEAMGIE 139 (307)
T ss_dssp TCCEEEESSSCCTTBCHH-HHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHH---HTTTCCC--TTTCCBCC
T ss_pred CCeEEEECCccccccCHH-HHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHH---HHcCCCC--ccCcCCcc
Confidence 355666666666666654 67899999997654333333333333 3334544322211 1111221 11245789
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----CCCCCcCHHH
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----GCKDIIRGEH 421 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----gt~~lI~~e~ 421 (718)
+.|+||||||+|+||+.+|+++++||++|+++|+++... .+...|+...++++++++||+|+++. .++++|+++.
T Consensus 140 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~ 218 (307)
T 1wwk_A 140 LEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNEE-RAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEER 218 (307)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHH
T ss_pred cCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCChh-hHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcCHHH
Confidence 999999999999999999999999999999999887653 33456777789999999999999873 3789999999
Q ss_pred HhcCCCCeEEEEcCCCCccccHHHHhc----c-----ccceeeecCCcccCccccchhhHHHHhhhcccccccccccccC
Q psy7896 422 FLQMRDDAIVCNIGHFDCEIQVSWLDK----N-----AVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLVNTIHE 492 (718)
Q Consensus 422 l~~MK~gAiLIN~GRgd~Eid~~aL~~----~-----~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~h~ 492 (718)
|+.||+|+++||+||+. -+|.++|.+ . ++|++..+|.- . ..+.+-.+|++.|||.
T Consensus 219 l~~mk~ga~lin~arg~-~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~---------~------~~~L~~~~nviltPh~ 282 (307)
T 1wwk_A 219 LKLMKKTAILINTSRGP-VVDTNALVKALKEGWIAGAGLDVFEEEPLP---------K------DHPLTKFDNVVLTPHI 282 (307)
T ss_dssp HHHSCTTCEEEECSCGG-GBCHHHHHHHHHHTSSSEEEESCCSSSSCC---------T------TCGGGGCTTEEECSSC
T ss_pred HhcCCCCeEEEECCCCc-ccCHHHHHHHHHhCCCcEEEEecCCCCCCC---------C------CChHHhCCCEEECCcc
Confidence 99999999999999985 466554443 2 23444444421 0 1112223799999998
Q ss_pred Ccccccc
Q psy7896 493 APTLLVH 499 (718)
Q Consensus 493 ~a~~~~Y 499 (718)
++.+...
T Consensus 283 ~~~t~~~ 289 (307)
T 1wwk_A 283 GASTVEA 289 (307)
T ss_dssp TTCBHHH
T ss_pred ccCcHHH
Confidence 8765443
No 35
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.79 E-value=1.2e-18 Score=185.09 Aligned_cols=209 Identities=18% Similarity=0.148 Sum_probs=144.2
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhccc
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLDIM 345 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~e 345 (718)
.-|-|...|.|....+.. +++++|+.|+.+.......+...+-+ +.+.|++....-. ++.+. |. .+.+.+
T Consensus 68 ~Lk~I~~~~~G~d~id~~-~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~---~~~g~---w~-~~~~~~ 139 (313)
T 2ekl_A 68 KLKIIARAGIGLDNIDTE-EAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMAL---AKSGI---FK-KIEGLE 139 (313)
T ss_dssp TCCEEEECSSCCTTBCHH-HHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHH---HHTTC---CC-CCCCCC
T ss_pred CCeEEEEcCCCCCccCHH-HHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHH---HHcCC---CC-CCCCCC
Confidence 456677777777666654 67899999997654433333333333 3344554332211 11112 22 345789
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----CCCCCcCHHH
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----GCKDIIRGEH 421 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----gt~~lI~~e~ 421 (718)
+.|+||||||+|+||+.+|+++++||++|+++|+++... .+...|....++++++++||+|+++. .++++|+++.
T Consensus 140 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~ 218 (313)
T 2ekl_A 140 LAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIIDYPQ 218 (313)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBCHHH
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhCHHH
Confidence 999999999999999999999999999999999887653 34456777779999999999999973 3789999999
Q ss_pred HhcCCCCeEEEEcCCCCccccHHHHhcc---------ccceeeecCCcccCccccchhhHHHHhhhcccccccccccccC
Q psy7896 422 FLQMRDDAIVCNIGHFDCEIQVSWLDKN---------AVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLVNTIHE 492 (718)
Q Consensus 422 l~~MK~gAiLIN~GRgd~Eid~~aL~~~---------~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~h~ 492 (718)
++.||+|+++||+||+. .+|.++|.+. ++|++..+|.. .....++.+ .+|++.|||.
T Consensus 219 l~~mk~ga~lIn~arg~-~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~-------~~~~~~L~~------~~nviltPH~ 284 (313)
T 2ekl_A 219 FELMKDNVIIVNTSRAV-AVNGKALLDYIKKGKVYAYATDVFWNEPPK-------EEWELELLK------HERVIVTTHI 284 (313)
T ss_dssp HHHSCTTEEEEESSCGG-GBCHHHHHHHHHTTCEEEEEESCCSSSSCC-------SHHHHHHHH------STTEEECCSC
T ss_pred HhcCCCCCEEEECCCCc-ccCHHHHHHHHHcCCCcEEEEecCCCCCCC-------CcccchHhh------CCCEEECCcc
Confidence 99999999999999985 4665555442 23444444422 000112222 3799999998
Q ss_pred Ccccccc
Q psy7896 493 APTLLVH 499 (718)
Q Consensus 493 ~a~~~~Y 499 (718)
++.+...
T Consensus 285 ~~~t~~~ 291 (313)
T 2ekl_A 285 GAQTKEA 291 (313)
T ss_dssp TTCSHHH
T ss_pred CcCcHHH
Confidence 8765443
No 36
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=99.79 E-value=3.7e-19 Score=190.53 Aligned_cols=219 Identities=13% Similarity=0.073 Sum_probs=141.8
Q ss_pred CcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhcccc
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLDIML 346 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL 346 (718)
-|-|...|.|....+.. +++++|+.|+.+.......+..++-+ +.+.|++...... ++.+.|. |.....+.++
T Consensus 70 Lk~I~~~~~G~d~id~~-~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~---~~~g~w~-~~~~~~~~~l 144 (331)
T 1xdw_A 70 VKYILTRTAGTDHIDKE-YAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSR---TAKKNFK-VDAFMFSKEV 144 (331)
T ss_dssp CCEEEESSSCCTTBCHH-HHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHH---HTTTCCC-CCSTTCCCCG
T ss_pred ceEEEEccccccccCHH-HHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHH---HHcCCCc-cccCcCccCC
Confidence 45566666666666554 66999999997754433333333333 3344544332211 1112222 1133457899
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEc----CCCCCCcCHHHH
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTT----TGCKDIIRGEHF 422 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~a----tgt~~lI~~e~l 422 (718)
.|+||||||+|+||+.+|+++++||++|+++|+++.... ..+....++++++++||+|+++ ..|+++|+++.|
T Consensus 145 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~---~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l 221 (331)
T 1xdw_A 145 RNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKGI---EDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDFL 221 (331)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSC---TTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHHH---HhccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHHH
Confidence 999999999999999999999999999999998775432 1235567999999999999986 357899999999
Q ss_pred hcCCCCeEEEEcCCCCccccHHHHhcc---------ccceeeecCCcccCccc-cchhhHHHHhhhccccc-cccccccc
Q psy7896 423 LQMRDDAIVCNIGHFDCEIQVSWLDKN---------AVEKVNVKPQVSPTSRT-KHLTTEALLATCNSLFK-YSLVNTIH 491 (718)
Q Consensus 423 ~~MK~gAiLIN~GRgd~Eid~~aL~~~---------~l~~~~v~P~V~v~s~e-~~~~~eal~n~~~~~~~-~nlv~~~h 491 (718)
+.||+|+++||+||+. .+|.++|.+. ++|+++.+|...+..+. .....+. ....+-. +|++.|||
T Consensus 222 ~~mk~ga~lin~srg~-~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~---~~~L~~~~~nvilTPH 297 (331)
T 1xdw_A 222 KKMKDGAILVNCARGQ-LVDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPL---FEKLVDLYPRVLITPH 297 (331)
T ss_dssp HTSCTTEEEEECSCGG-GBCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHH---HHHHHHTTTTEEECCS
T ss_pred hhCCCCcEEEECCCcc-cccHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccc---hHHHHhCCCCEEEcCc
Confidence 9999999999999985 4666555542 24555554421000000 0000000 0012234 79999999
Q ss_pred CCcccccc
Q psy7896 492 EAPTLLVH 499 (718)
Q Consensus 492 ~~a~~~~Y 499 (718)
.++.+...
T Consensus 298 ia~~t~~~ 305 (331)
T 1xdw_A 298 LGSYTDEA 305 (331)
T ss_dssp CTTCSHHH
T ss_pred cccChHHH
Confidence 88765444
No 37
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.79 E-value=6.2e-19 Score=188.90 Aligned_cols=215 Identities=15% Similarity=0.126 Sum_probs=143.2
Q ss_pred CcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhcccc
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLDIML 346 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL 346 (718)
-|-|...|.|....+.. +++++|+.|+.+.......+..++-+ +.+.|++....-. ++.+.|. +....+.++
T Consensus 71 Lk~I~~~~~G~d~id~~-~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~---~~~g~w~--~~~~~~~~l 144 (333)
T 1j4a_A 71 ITKMSLRNVGVDNIDMA-KAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEK---VARHDLR--WAPTIGREV 144 (333)
T ss_dssp CCEEEESSSCCTTBCHH-HHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHH---HHTTBCC--CTTCCBCCG
T ss_pred CeEEEECCcccccccHH-HHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHH---HHcCCCc--cCCcccccC
Confidence 45566666666666654 66899999997754333333333333 3444654333211 1112222 233467899
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec-CHHHHhccCcEEEEcC----CCCCCcCHHH
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT-TMEEAAKEGGIFVTTT----GCKDIIRGEH 421 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~-~Leell~~aDiIi~at----gt~~lI~~e~ 421 (718)
.|+||||||+|+||+.+|+++++||++|+++|+++..... .+..+. ++++++++||+|+++. .|+++|+++.
T Consensus 145 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~---~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~ 221 (333)
T 1j4a_A 145 RDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPELE---KKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDES 221 (333)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchhHH---hhCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHH
Confidence 9999999999999999999999999999999988765421 234555 8999999999999973 3789999999
Q ss_pred HhcCCCCeEEEEcCCCCccccHHHHhcc---------ccceeeecCCcccCccccchh----hHHHHhhhcccccccccc
Q psy7896 422 FLQMRDDAIVCNIGHFDCEIQVSWLDKN---------AVEKVNVKPQVSPTSRTKHLT----TEALLATCNSLFKYSLVN 488 (718)
Q Consensus 422 l~~MK~gAiLIN~GRgd~Eid~~aL~~~---------~l~~~~v~P~V~v~s~e~~~~----~eal~n~~~~~~~~nlv~ 488 (718)
|+.||+|++|||+||+. .+|.++|.+. ++|+++.+|...+..+.+.-. ..++.+ .+|++.
T Consensus 222 l~~mk~ga~lIn~arg~-~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~------~~nvil 294 (333)
T 1j4a_A 222 IAKMKQDVVIVNVSRGP-LVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIA------RPNVLV 294 (333)
T ss_dssp HHHSCTTEEEEECSCGG-GBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHH------CTTEEE
T ss_pred HhhCCCCcEEEECCCCc-ccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHh------CCCEEE
Confidence 99999999999999986 4676655542 345555555321111100000 012322 379999
Q ss_pred cccCCcccccc
Q psy7896 489 TIHEAPTLLVH 499 (718)
Q Consensus 489 ~~h~~a~~~~Y 499 (718)
|||.++.+...
T Consensus 295 TPHia~~t~~~ 305 (333)
T 1j4a_A 295 TPKTAFYTTHA 305 (333)
T ss_dssp CSSCTTCBHHH
T ss_pred CCccccCHHHH
Confidence 99988765444
No 38
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.78 E-value=1.7e-18 Score=184.60 Aligned_cols=209 Identities=10% Similarity=0.009 Sum_probs=143.4
Q ss_pred CcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhh-hhhhccc
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQ-AKYLDIM 345 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~-~~~~g~e 345 (718)
-|-|...|.|....+.. +++++|+.|+.+.......+..++.+ +.+.|++....-. ++.+.|..+. ..+.+.+
T Consensus 68 Lk~I~~~~~G~d~id~~-~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~---~~~g~w~~~~~~~~~~~~ 143 (320)
T 1gdh_A 68 IKCISTYSIGFDHIDLD-ACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKM---IRTRSWPGWEPLELVGEK 143 (320)
T ss_dssp CCEEEEESSCCTTBCHH-HHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHH---HHTTCCCCCCTTTTCBCC
T ss_pred ceEEEECCcccccccHH-HHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHH---HHcCCCCccccccccCcC
Confidence 56677777777777665 67899999997765444444444333 3344554332211 1122232111 1345789
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEec-CCccHHHHhhcCceec-CHHHHhccCcEEEEcC----CCCCCcCH
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEI-DPINALQASMEGYEVT-TMEEAAKEGGIFVTTT----GCKDIIRG 419 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~-dp~~al~a~~~G~~v~-~Leell~~aDiIi~at----gt~~lI~~ 419 (718)
+.|++|||||+|+||+.+|+++++||++|+++|+ ++... .+...|.... ++++++++||+|+++. .++++|++
T Consensus 144 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~ 222 (320)
T 1gdh_A 144 LDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNK 222 (320)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCH
Confidence 9999999999999999999999999999999998 77553 3334576666 8999999999999873 47899999
Q ss_pred HHHhcCCCCeEEEEcCCCCccccHHHHhc----c-----ccceeeecCCcccCccccchhhHHHHhhhcccccccccccc
Q psy7896 420 EHFLQMRDDAIVCNIGHFDCEIQVSWLDK----N-----AVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLVNTI 490 (718)
Q Consensus 420 e~l~~MK~gAiLIN~GRgd~Eid~~aL~~----~-----~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~ 490 (718)
+.++.||+|++|||+||+. .+|.++|.+ . ++|+++.+|.. ..+.+-.+|++.||
T Consensus 223 ~~l~~mk~gailIn~arg~-~vd~~aL~~aL~~g~i~gA~lDv~~~eP~~----------------~~~L~~~~nviltP 285 (320)
T 1gdh_A 223 ATIKSLPQGAIVVNTARGD-LVDNELVVAALEAGRLAYAGFDVFAGEPNI----------------NEGYYDLPNTFLFP 285 (320)
T ss_dssp HHHTTSCTTEEEEECSCGG-GBCHHHHHHHHHHTSEEEEEESCCTTTTSC----------------CTTGGGCTTEEECS
T ss_pred HHHhhCCCCcEEEECCCCc-ccCHHHHHHHHHhCCCcEEEEeCCCCCCCC----------------CChhhhCCCEEECC
Confidence 9999999999999999985 466555443 2 23444333311 11122237999999
Q ss_pred cCCcccccc
Q psy7896 491 HEAPTLLVH 499 (718)
Q Consensus 491 h~~a~~~~Y 499 (718)
|.++.+...
T Consensus 286 H~~~~t~~~ 294 (320)
T 1gdh_A 286 HIGSAATQA 294 (320)
T ss_dssp SCTTCBHHH
T ss_pred cCCcCcHHH
Confidence 988765444
No 39
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.77 E-value=2.8e-19 Score=190.51 Aligned_cols=194 Identities=12% Similarity=-0.050 Sum_probs=122.4
Q ss_pred HHhcCCeEEEeecCc-hhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhcccccCcEEEEEecChhHHHHH
Q psy7896 288 LRLFGSRVIVTEIDP-INALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGYGDVGKGCA 364 (718)
Q Consensus 288 Lra~Gv~VtV~D~dp-~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~G~IG~~vA 364 (718)
+..+|+.|+.+.... ...+..++.+ +.+.|++....-. .+.+. |.. ..+.++.||||||||+|+||+.+|
T Consensus 83 ~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~---~~~g~---W~~-~~~~~l~g~tvGIiG~G~IG~~vA 155 (315)
T 3pp8_A 83 MLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQAL---KNQAL---WKP-LPEYTREEFSVGIMGAGVLGAKVA 155 (315)
T ss_dssp SSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHH---HHTTC---CCC-CCCCCSTTCCEEEECCSHHHHHHH
T ss_pred hhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHH---HHhcc---cCC-CCCCCcCCCEEEEEeeCHHHHHHH
Confidence 456788888754322 2233333333 3344544322211 11111 222 257899999999999999999999
Q ss_pred HHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----CCCCCcCHHHHhcCCCCeEEEEcCCCCcc
Q psy7896 365 QSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----GCKDIIRGEHFLQMRDDAIVCNIGHFDCE 440 (718)
Q Consensus 365 ~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----gt~~lI~~e~l~~MK~gAiLIN~GRgd~E 440 (718)
+++++||++|+++++++...... .......++++++++||+|+++. .|+++|+++.|+.||+|++|||+|||. -
T Consensus 156 ~~l~~~G~~V~~~dr~~~~~~~~-~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~-~ 233 (315)
T 3pp8_A 156 ESLQAWGFPLRCWSRSRKSWPGV-ESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGV-H 233 (315)
T ss_dssp HHHHTTTCCEEEEESSCCCCTTC-EEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGG-G
T ss_pred HHHHHCCCEEEEEcCCchhhhhh-hhhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCCh-h
Confidence 99999999999999877532111 00011257999999999999873 478999999999999999999999996 4
Q ss_pred ccHHHHhccccceeeecCCcccCccccchhhHHHHhhhcccccccccccccCCccc
Q psy7896 441 IQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLVNTIHEAPTL 496 (718)
Q Consensus 441 id~~aL~~~~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~h~~a~~ 496 (718)
+|.++|.+..-+.......+||++.|.. ....+.+-.+|++.|||.++.+
T Consensus 234 vd~~aL~~aL~~g~i~gA~lDV~~~EPl------~~~~pL~~~~nvilTPHia~~t 283 (315)
T 3pp8_A 234 VQEADLLAALDSGKLKGAMLDVFSQEPL------PQESPLWRHPRVAMTPHIAAVT 283 (315)
T ss_dssp BCHHHHHHHHHHTSEEEEEESCCSSSSC------CTTCGGGGCTTEEECSSCSSCC
T ss_pred hhHHHHHHHHHhCCccEEEcCCCCCCCC------CCCChhhcCCCEEECCCCCccc
Confidence 7766655421111111123333333321 1112223348999999987664
No 40
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.77 E-value=2.9e-18 Score=184.92 Aligned_cols=211 Identities=16% Similarity=0.100 Sum_probs=139.3
Q ss_pred CcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccch----hhhhhh
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTE----DQAKYL 342 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~----~~~~~~ 342 (718)
-|-|...|.|....+.. +++++|+.|+.+.......+...+-+ +.+.|++...... ++.+.|.. .+....
T Consensus 86 Lk~I~~~~~G~d~id~~-~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~---~~~g~w~~~~~~~~~~~~ 161 (347)
T 1mx3_A 86 LRIIVRIGSGFDNIDIK-SAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQA---LREGTRVQSVEQIREVAS 161 (347)
T ss_dssp CCEEEESSSCCTTBCHH-HHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHH---HHTTCCCCSHHHHHHHTT
T ss_pred CCEEEEcccccCcccHH-HHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHH---HHcCCccccccccccccc
Confidence 35666666666666654 67899999997765444444333333 3344544322211 11122211 001112
Q ss_pred c-ccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEcC----CCCCC
Q psy7896 343 D-IMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTTT----GCKDI 416 (718)
Q Consensus 343 g-~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~at----gt~~l 416 (718)
+ .++.|+||||||+|+||+.+|+++++||++|+++|+++.... +...|... .++++++++||+|+++. .|+++
T Consensus 162 ~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~l 240 (347)
T 1mx3_A 162 GAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGV-ERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHL 240 (347)
T ss_dssp TCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTH-HHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTS
T ss_pred CccCCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhh-HhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHH
Confidence 3 689999999999999999999999999999999998765432 23346554 48999999999999863 47899
Q ss_pred cCHHHHhcCCCCeEEEEcCCCCccccHHHHhcc---------ccceeeecCCcccCccccchhhHHHHhhhccccccccc
Q psy7896 417 IRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDKN---------AVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLV 487 (718)
Q Consensus 417 I~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~~---------~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv 487 (718)
|+++.|+.||+|++|||+||+. .+|.++|.+. ++|+++.+|.. . .....+..+|++
T Consensus 241 i~~~~l~~mk~gailIN~arg~-~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~---------~-----~~~~L~~~~nvi 305 (347)
T 1mx3_A 241 INDFTVKQMRQGAFLVNTARGG-LVDEKALAQALKEGRIRGAALDVHESEPFS---------F-----SQGPLKDAPNLI 305 (347)
T ss_dssp BSHHHHTTSCTTEEEEECSCTT-SBCHHHHHHHHHHTSEEEEEESCCSSSSCC---------T-----TSSTTTTCSSEE
T ss_pred hHHHHHhcCCCCCEEEECCCCh-HHhHHHHHHHHHhCCCcEEEEeecccCCCC---------C-----CCchHHhCCCEE
Confidence 9999999999999999999996 4665555442 23444444421 0 001122348999
Q ss_pred ccccCCcccccc
Q psy7896 488 NTIHEAPTLLVH 499 (718)
Q Consensus 488 ~~~h~~a~~~~Y 499 (718)
.|||.++.+...
T Consensus 306 ~tPHia~~t~~~ 317 (347)
T 1mx3_A 306 CTPHAAWYSEQA 317 (347)
T ss_dssp ECSSCTTCCHHH
T ss_pred EEchHHHHHHHH
Confidence 999988765443
No 41
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.75 E-value=1.4e-17 Score=188.48 Aligned_cols=171 Identities=16% Similarity=0.198 Sum_probs=123.4
Q ss_pred CcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhcccc
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLDIML 346 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL 346 (718)
-|-|...|.|..+.++. +++++|+.|+.+.......+..++-+ +.+.|++...+-. .+.+.|. +..+.+.++
T Consensus 67 Lk~i~~~~~G~d~id~~-~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~---~~~g~w~--~~~~~~~~l 140 (529)
T 1ygy_A 67 LKIVARAGVGLDNVDVD-AATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADAS---LREHTWK--RSSFSGTEI 140 (529)
T ss_dssp CCEEEESSSCCTTBCHH-HHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHH---HHTTCCC--GGGCCBCCC
T ss_pred CcEEEECCcCcCccCHh-HHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHH---HHhCCCc--ccCcCcccc
Confidence 34555555555555544 67899999997755444444433333 3445655333211 1112221 234568899
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----CCCCCcCHHHH
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----GCKDIIRGEHF 422 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----gt~~lI~~e~l 422 (718)
.||||||||+|+||+.+|++++++|++|++||+++.. ..+...|+...++++++++||+|++++ .+.++++++.+
T Consensus 141 ~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~ 219 (529)
T 1ygy_A 141 FGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEAL 219 (529)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcCcEEcCHHHHHhcCCEEEECCCCchHHHHHhCHHHH
Confidence 9999999999999999999999999999999887643 234455777779999999999999974 57899999899
Q ss_pred hcCCCCeEEEEcCCCCccccHHHHh
Q psy7896 423 LQMRDDAIVCNIGHFDCEIQVSWLD 447 (718)
Q Consensus 423 ~~MK~gAiLIN~GRgd~Eid~~aL~ 447 (718)
+.||+|++++|+||+. .+|.++|.
T Consensus 220 ~~~k~g~ilin~arg~-iv~~~aL~ 243 (529)
T 1ygy_A 220 AKTKPGVIIVNAARGG-LVDEAALA 243 (529)
T ss_dssp TTSCTTEEEEECSCTT-SBCHHHHH
T ss_pred hCCCCCCEEEECCCCc-hhhHHHHH
Confidence 9999999999999996 36654443
No 42
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.75 E-value=5.9e-18 Score=179.83 Aligned_cols=212 Identities=18% Similarity=0.100 Sum_probs=138.3
Q ss_pred CcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhh-hhhhccc
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQ-AKYLDIM 345 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~-~~~~g~e 345 (718)
-|-|...|.|....+.. +++++|+.|+.+.......+..++-+ +.+.|++...... ++.+.|..+. ..+.+.+
T Consensus 66 Lk~i~~~~~G~d~id~~-~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~---~~~g~w~~~~~~~~~~~~ 141 (311)
T 2cuk_A 66 LKVIACYSVGVDHVDLE-AARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAY---ARDGLWKAWHPELLLGLD 141 (311)
T ss_dssp CCEEECSSSCCTTBCHH-HHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHH---HHTTCCCCCCTTTTCBCC
T ss_pred CeEEEECCcCccccCHH-HHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHH---HHcCCCCccccccccCcC
Confidence 45556666666666554 67899999997665444443333333 3344544332211 1112232111 1234789
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----CCCCCcCHHH
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----GCKDIIRGEH 421 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----gt~~lI~~e~ 421 (718)
+.|+||||||+|+||+.+|+++++||++|+++|+++.... ....++++++++||+|+++. .++++|+++.
T Consensus 142 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 142 LQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------YPFLSLEELLKEADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------SCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHH
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------cccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHH
Confidence 9999999999999999999999999999999998775432 24568999999999999972 4789999999
Q ss_pred HhcCCCCeEEEEcCCCCccccHHHHhccccceeeec-CCcccCccccchhhHHHHhhhcccccccccccccCCcccccc
Q psy7896 422 FLQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVK-PQVSPTSRTKHLTTEALLATCNSLFKYSLVNTIHEAPTLLVH 499 (718)
Q Consensus 422 l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~-P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~h~~a~~~~Y 499 (718)
++.||+|+++||+||+. .+|.++|.+. ++ ..+. ..+|+++.|.... ....+-.+|++.|||.++.+...
T Consensus 216 l~~mk~ga~lin~srg~-~vd~~aL~~a-L~-g~i~ga~lDv~~~eP~~~------~~~L~~~~nviltPh~~~~t~~~ 285 (311)
T 2cuk_A 216 LFAMKRGAILLNTARGA-LVDTEALVEA-LR-GHLFGAGLDVTDPEPLPP------GHPLYALPNAVITPHIGSAGRTT 285 (311)
T ss_dssp HTTSCTTCEEEECSCGG-GBCHHHHHHH-HT-TTSSEEEESSCSSSSCCT------TSGGGGCTTEEECCSCTTCBHHH
T ss_pred HhhCCCCcEEEECCCCC-ccCHHHHHHH-Hh-CcCCEEEEeeCCCCCCCC------CChhhhCCCEEECCcCCCCCHHH
Confidence 99999999999999985 4665555442 11 1111 1233333332111 11122237999999988765443
No 43
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.75 E-value=9.6e-18 Score=180.72 Aligned_cols=219 Identities=14% Similarity=0.034 Sum_probs=141.6
Q ss_pred CcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhh-----hh
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQA-----KY 341 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~-----~~ 341 (718)
-|-|...|.|....+.. +++++|+.|+.+.......+..++.+ +.+.|++....-. ++.+....|+. ..
T Consensus 81 Lk~I~~~~~G~d~id~~-~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~---~~~g~~~~w~~~~~~~~~ 156 (348)
T 2w2k_A 81 LKVFAAAGAGFDWLDLD-ALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERA---ARTGDPETFNRVHLEIGK 156 (348)
T ss_dssp CCEEEESSSCCTTBCHH-HHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHH---HTTCCHHHHHHHHHHHHT
T ss_pred ceEEEECCccccccCHH-HHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHH---HHcCCCcccccccccccc
Confidence 55666666666666654 67999999997655444444333333 3344554332211 11122000211 13
Q ss_pred hcccccCcEEEEEecChhHHHHHHHHH-hCCCEEEEEecCCccHHHHhhcCceec-CHHHHhccCcEEEEcC----CCCC
Q psy7896 342 LDIMLAGKVAVVAGYGDVGKGCAQSLR-LFGSRVIVTEIDPINALQASMEGYEVT-TMEEAAKEGGIFVTTT----GCKD 415 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~IG~~vA~~l~-~fGa~Viv~d~dp~~al~a~~~G~~v~-~Leell~~aDiIi~at----gt~~ 415 (718)
.+.++.|++|||||+|+||+.+|++++ +||++|+++|+++.....+...|.... ++++++++||+|+++. .+++
T Consensus 157 ~~~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~ 236 (348)
T 2w2k_A 157 SAHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHH 236 (348)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTT
T ss_pred cCcCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHH
Confidence 578999999999999999999999999 999999999988754333333466666 8999999999999973 3679
Q ss_pred CcCHHHHhcCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccCccccchhhHHHHhhhcccccccccccccCCcc
Q psy7896 416 IIRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLVNTIHEAPT 495 (718)
Q Consensus 416 lI~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~h~~a~ 495 (718)
+|+++.++.||++++|||+||+. .+|.++|.+..-+........|+++.|. ....++. -.+|++.|||.++.
T Consensus 237 li~~~~l~~mk~gailin~srg~-~vd~~aL~~aL~~~~i~gaglDv~~~EP-~~~~~L~------~~~nviltPH~~~~ 308 (348)
T 2w2k_A 237 LIDEAFFAAMKPGSRIVNTARGP-VISQDALIAALKSGKLLSAGLDVHEFEP-QVSKELI------EMKHVTLTTHIGGV 308 (348)
T ss_dssp CBCHHHHHHSCTTEEEEECSCGG-GBCHHHHHHHHHTTSEEEEEESSCTTTT-SCCHHHH------TSSSEEECCSCTTC
T ss_pred HhhHHHHhcCCCCCEEEECCCCc-hhCHHHHHHHHHhCCceEEEeccCCCCC-CCCchhh------cCCCEEEcCcCCCC
Confidence 99999999999999999999995 4665555542111111112334443331 1111222 23789999998766
Q ss_pred cccc
Q psy7896 496 LLVH 499 (718)
Q Consensus 496 ~~~Y 499 (718)
+...
T Consensus 309 t~e~ 312 (348)
T 2w2k_A 309 AIET 312 (348)
T ss_dssp SHHH
T ss_pred CHHH
Confidence 5433
No 44
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.72 E-value=7.4e-18 Score=178.52 Aligned_cols=207 Identities=15% Similarity=0.080 Sum_probs=129.7
Q ss_pred CcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhcccc
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLDIML 346 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL 346 (718)
-|-|...|.|....+... .++|+.|+.........+..++-+ +.+.|++....-. ++.+. |.......++
T Consensus 51 Lk~I~~~~~G~d~id~~~--~~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~---~~~g~---w~~~~~~~~l 122 (303)
T 1qp8_A 51 LKFIQVVTAGLDHLPWES--IPPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEK---MKRGD---YGRDVEIPLI 122 (303)
T ss_dssp CCCEEBSSSCCTTSCCTT--SCTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHH---HHTTC---CCCCSCCCCC
T ss_pred CcEEEECCcCcccccHHH--HhcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHH---HHcCC---CCCCCCCCCC
Confidence 445555555555555542 368888886544333333333333 3344544322211 11112 2211123589
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----CCCCCcCHHHH
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----GCKDIIRGEHF 422 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----gt~~lI~~e~l 422 (718)
.||||||||+|+||+.+|+++++||++|+++|+++. . . ......++++++++||+|+++. .|+++|+++.|
T Consensus 123 ~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~-~--~--~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l 197 (303)
T 1qp8_A 123 QGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK-E--G--PWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHL 197 (303)
T ss_dssp TTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC-C--S--SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc-c--c--CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHH
Confidence 999999999999999999999999999999998775 1 1 2234568999999999999873 57899999999
Q ss_pred hcCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccC-ccccchhhHHHHhhhcccccccccccccCCcc
Q psy7896 423 LQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPT-SRTKHLTTEALLATCNSLFKYSLVNTIHEAPT 495 (718)
Q Consensus 423 ~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~-s~e~~~~~eal~n~~~~~~~~nlv~~~h~~a~ 495 (718)
+.||+|+++||+||+. .+|.++|.+..-+........|++ +.|......++. -.+|++.|||.++.
T Consensus 198 ~~mk~gailin~srg~-~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~------~~~nviltPH~~~~ 264 (303)
T 1qp8_A 198 ALMAEDAVFVNVGRAE-VLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFF------SLPNVVATPWVAGG 264 (303)
T ss_dssp TTSCTTCEEEECSCGG-GBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHH------TSTTEEECCSCSSS
T ss_pred hhCCCCCEEEECCCCc-ccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhh------cCCCEEECCCcCCC
Confidence 9999999999999985 466555544210111111233444 222111122222 23799999997764
No 45
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.72 E-value=8e-18 Score=177.43 Aligned_cols=142 Identities=14% Similarity=0.142 Sum_probs=103.3
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEc----CCCCCCc
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTT----TGCKDII 417 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~a----tgt~~lI 417 (718)
..++.||||||||+|+||+.+|+++++||++|++||+++.... .... .++++++++||+|+++ ..|+++|
T Consensus 117 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-----~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li 191 (290)
T 3gvx_A 117 TTLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQN-----VDVISESPADLFRQSDFVLIAIPLTDKTRGMV 191 (290)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTT-----CSEECSSHHHHHHHCSEEEECCCCCTTTTTCB
T ss_pred ceeeecchheeeccCchhHHHHHHHHhhCcEEEEEeccccccc-----cccccCChHHHhhccCeEEEEeeccccchhhh
Confidence 3689999999999999999999999999999999998765421 1333 4899999999999986 3578999
Q ss_pred CHHHHhcCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccCccccchhhHHHHhhhcccccccccccccCC-ccc
Q psy7896 418 RGEHFLQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLVNTIHEA-PTL 496 (718)
Q Consensus 418 ~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~h~~-a~~ 496 (718)
+++.|+.||+|++|||+||+. .+|.++|.+..-+.......+|+++.|.. .+.+-.+|++.|||.+ +.+
T Consensus 192 ~~~~l~~mk~gailIN~aRG~-~vd~~aL~~aL~~g~i~ga~lDV~~~EP~---------~pL~~~~nvilTPHiag~~t 261 (290)
T 3gvx_A 192 NSRLLANARKNLTIVNVARAD-VVSKPDMIGFLKERSDVWYLSDVWWNEPE---------ITETNLRNAILSPHVAGGMS 261 (290)
T ss_dssp SHHHHTTCCTTCEEEECSCGG-GBCHHHHHHHHHHCTTCEEEESCCTTTTS---------CCSCCCSSEEECCSCSSCBT
T ss_pred hHHHHhhhhcCceEEEeehhc-ccCCcchhhhhhhccceEEeeccccCCcc---------cchhhhhhhhcCccccCCcc
Confidence 999999999999999999996 46766655421111111122333333321 2233348999999966 554
Q ss_pred ccc
Q psy7896 497 LVH 499 (718)
Q Consensus 497 ~~Y 499 (718)
..+
T Consensus 262 ~e~ 264 (290)
T 3gvx_A 262 GEI 264 (290)
T ss_dssp TBC
T ss_pred chH
Confidence 333
No 46
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.72 E-value=2.4e-17 Score=176.81 Aligned_cols=205 Identities=15% Similarity=0.098 Sum_probs=137.8
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhccc
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLDIM 345 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~e 345 (718)
.-|-|...|.|....+.. +++++|+.|+.+.......+...+-+ +.+.|++....-. ++.+.|.. .....+.+
T Consensus 87 ~Lk~I~~~~~G~d~id~~-~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~---~~~g~w~~-~~~~~~~~ 161 (333)
T 3ba1_A 87 KLEIVSSFSVGLDKVDLI-KCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKY---VRRGAWKF-GDFKLTTK 161 (333)
T ss_dssp TCCEEEESSSCCTTBCHH-HHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHH---HHTTGGGG-CCCCCCCC
T ss_pred CCcEEEEcCccccccCHH-HHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHH---HHcCCCCc-cccccccc
Confidence 356666666666666654 67899999997655444444433333 3334544322211 11112210 11134789
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-ecCHHHHhccCcEEEEcC----CCCCCcCHH
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-VTTMEEAAKEGGIFVTTT----GCKDIIRGE 420 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v~~Leell~~aDiIi~at----gt~~lI~~e 420 (718)
+.||+|||||+|+||+.+|++++++|++|+++|+++... .|+. ..++++++++||+|+++. .++++|+++
T Consensus 162 l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~-----~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~ 236 (333)
T 3ba1_A 162 FSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPN-----TNYTYYGSVVELASNSDILVVACPLTPETTHIINRE 236 (333)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTT-----CCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhc-----cCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHH
Confidence 999999999999999999999999999999999877532 2444 468999999999999973 368999999
Q ss_pred HHhcCCCCeEEEEcCCCCccccHHHHhcc---------ccceeeecCCcccCccccchhhHHHHhhhccccccccccccc
Q psy7896 421 HFLQMRDDAIVCNIGHFDCEIQVSWLDKN---------AVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLVNTIH 491 (718)
Q Consensus 421 ~l~~MK~gAiLIN~GRgd~Eid~~aL~~~---------~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~h 491 (718)
.++.||++++|||++|+. .+|.++|.+. ++|++..+|.. + ...+-.+|++.|||
T Consensus 237 ~l~~mk~gailIn~srG~-~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~---------------~-~~L~~~~nviltPH 299 (333)
T 3ba1_A 237 VIDALGPKGVLINIGRGP-HVDEPELVSALVEGRLGGAGLDVFEREPEV---------------P-EKLFGLENVVLLPH 299 (333)
T ss_dssp HHHHHCTTCEEEECSCGG-GBCHHHHHHHHHHTSSCEEEESCCTTTTCC---------------C-GGGGGCTTEEECSS
T ss_pred HHhcCCCCCEEEECCCCc-hhCHHHHHHHHHcCCCeEEEEecCCCCCCC---------------c-chhhcCCCEEECCc
Confidence 999999999999999996 4665555442 13443333321 1 11223379999999
Q ss_pred CCcccccc
Q psy7896 492 EAPTLLVH 499 (718)
Q Consensus 492 ~~a~~~~Y 499 (718)
.++.+...
T Consensus 300 ~~~~t~e~ 307 (333)
T 3ba1_A 300 VGSGTVET 307 (333)
T ss_dssp CTTCSHHH
T ss_pred CCCCCHHH
Confidence 87765443
No 47
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.72 E-value=6e-17 Score=173.06 Aligned_cols=176 Identities=17% Similarity=0.105 Sum_probs=123.8
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhh-hhhhcc
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQ-AKYLDI 344 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~-~~~~g~ 344 (718)
.-|-|...|.|....+.. +++++|+.|+.+.......+...+.+ +.+.|++....- .++.+.|..+. ..+.+.
T Consensus 76 ~Lk~I~~~~~G~d~id~~-~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~---~~~~~~w~~~~~~~~~~~ 151 (330)
T 2gcg_A 76 NLKVISTMSVGIDHLALD-EIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIE---EVKNGGWTSWKPLWLCGY 151 (330)
T ss_dssp TCCEEEESSSCCTTBCHH-HHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHH---HHHTTCCCSCCTTSSCBC
T ss_pred CceEEEECCcccccccHH-HHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHH---HHHcCCCcccCcccccCc
Confidence 356666666666666554 67899999997765444444433333 333454422221 11122232211 123478
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----CCCCCcCHH
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----GCKDIIRGE 420 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----gt~~lI~~e 420 (718)
++.|++|||||+|+||+.+|+.++++|++|+++|+++.....+...|....+++++++++|+|+++. .++++++++
T Consensus 152 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~ 231 (330)
T 2gcg_A 152 GLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKD 231 (330)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBSHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCCEEEEeCCCChHHHHhhCHH
Confidence 9999999999999999999999999999999999877543333344666669999999999999873 368899999
Q ss_pred HHhcCCCCeEEEEcCCCCccccHHHHhc
Q psy7896 421 HFLQMRDDAIVCNIGHFDCEIQVSWLDK 448 (718)
Q Consensus 421 ~l~~MK~gAiLIN~GRgd~Eid~~aL~~ 448 (718)
.++.||++++|||++|+. .+|.++|.+
T Consensus 232 ~~~~mk~gailIn~srg~-~v~~~aL~~ 258 (330)
T 2gcg_A 232 FFQKMKETAVFINISRGD-VVNQDDLYQ 258 (330)
T ss_dssp HHHHSCTTCEEEECSCGG-GBCHHHHHH
T ss_pred HHhcCCCCcEEEECCCCc-ccCHHHHHH
Confidence 999999999999999985 455555443
No 48
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.71 E-value=4e-17 Score=174.89 Aligned_cols=173 Identities=16% Similarity=0.090 Sum_probs=120.3
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccchhhhhhhc--
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLTEDQAKYLD-- 343 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g-- 343 (718)
.-|-|...|.|....+.. +++++|+.|+.+.......+..++-+ +.+.|++....-. ++.+.|..+.....+
T Consensus 64 ~Lk~I~~~~~G~d~id~~-~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~---~~~g~w~~~~~~~~~~~ 139 (333)
T 2d0i_A 64 RLKVISCHSAGYDNIDLE-EATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKF---IRRGEWESHAKIWTGFK 139 (333)
T ss_dssp TCCEEEESSSCCTTBCHH-HHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHH---HHTTCCCCHHHHHTTSC
T ss_pred CceEEEECCcccccccHH-HHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHH---HHcCCCCcCcccccCCc
Confidence 456666666666666654 67899999997643333333333333 3334544222211 111223211122346
Q ss_pred --ccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----CCCCCc
Q psy7896 344 --IMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----GCKDII 417 (718)
Q Consensus 344 --~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----gt~~lI 417 (718)
.++.|++|||||+|+||+.+|++++++|++|+++|+++.. ..+...|....++++++++||+|+++. .+++++
T Consensus 140 ~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i 218 (333)
T 2d0i_A 140 RIESLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKARYMDIDELLEKSDIVILALPLTRDTYHII 218 (333)
T ss_dssp CCCCSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEEECCHHHHHHHCSEEEECCCCCTTTTTSB
T ss_pred ccCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCceecCHHHHHhhCCEEEEcCCCChHHHHHh
Confidence 7999999999999999999999999999999999988765 223334666679999999999999873 468899
Q ss_pred CHHHHhcCCCCeEEEEcCCCCccccHHHHh
Q psy7896 418 RGEHFLQMRDDAIVCNIGHFDCEIQVSWLD 447 (718)
Q Consensus 418 ~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~ 447 (718)
+++.++.||++ ++||+||+. .+|.++|.
T Consensus 219 ~~~~~~~mk~g-ilin~srg~-~vd~~aL~ 246 (333)
T 2d0i_A 219 NEERVKKLEGK-YLVNIGRGA-LVDEKAVT 246 (333)
T ss_dssp CHHHHHHTBTC-EEEECSCGG-GBCHHHHH
T ss_pred CHHHHhhCCCC-EEEECCCCc-ccCHHHHH
Confidence 98889999999 999999985 46654443
No 49
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.71 E-value=1.1e-16 Score=171.39 Aligned_cols=174 Identities=16% Similarity=0.098 Sum_probs=122.1
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhh--hhhhHHHHHHHHHHhcccccccc----hhh-hh
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--YELDEEVAALHLEHLGVKLTKLT----EDQ-AK 340 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeG--f~L~r~i~~~~l~~lgv~~~~~~----~~~-~~ 340 (718)
.-|-|...|.|....+.. +++++|+.|+.+.......+..++.+ +.+.|++....-. ++.+.|. .+. ..
T Consensus 67 ~Lk~I~~~~~G~d~id~~-~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~---~~~~~w~~~~~~~~~~~ 142 (334)
T 2dbq_A 67 KLRIVANYAVGYDNIDIE-EATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRF---VRSGEWKKRGVAWHPKW 142 (334)
T ss_dssp TCCEEEESSSCCTTBCHH-HHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHH---HHTSHHHHTTCCCCTTT
T ss_pred CceEEEECCcccccccHH-HHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHH---HHcCCCccccccccccc
Confidence 355666666666666654 67899999997665444444433333 3344544322211 1112221 111 12
Q ss_pred hhcccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----CCCCC
Q psy7896 341 YLDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----GCKDI 416 (718)
Q Consensus 341 ~~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----gt~~l 416 (718)
+.+.++.|++|||||+|+||+.+|++++++|++|+++|+++.. ..+...|....++++++++||+|+++. .++++
T Consensus 143 ~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~ 221 (334)
T 2dbq_A 143 FLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHL 221 (334)
T ss_dssp TCCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTC
T ss_pred ccccCCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHh
Confidence 3478999999999999999999999999999999999988765 222234667779999999999999873 26789
Q ss_pred cCHHHHhcCCCCeEEEEcCCCCccccHHHHh
Q psy7896 417 IRGEHFLQMRDDAIVCNIGHFDCEIQVSWLD 447 (718)
Q Consensus 417 I~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~ 447 (718)
++++.++.||++++|||+||+. .+|.++|.
T Consensus 222 i~~~~~~~mk~~ailIn~srg~-~v~~~aL~ 251 (334)
T 2dbq_A 222 INEERLKLMKKTAILINIARGK-VVDTNALV 251 (334)
T ss_dssp BCHHHHHHSCTTCEEEECSCGG-GBCHHHHH
T ss_pred hCHHHHhcCCCCcEEEECCCCc-ccCHHHHH
Confidence 9988999999999999999985 46644443
No 50
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.53 E-value=4.4e-14 Score=147.99 Aligned_cols=149 Identities=14% Similarity=0.174 Sum_probs=107.9
Q ss_pred cCCCChhHHHHHHhcCCeEEEeecCc---hhhhhhhhhhhhhhHHHHHHHHHHhcccccccchhhhhhhcccccCcEEEE
Q psy7896 277 YGDVGKGCAQSLRLFGSRVIVTEIDP---INALQASMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVV 353 (718)
Q Consensus 277 yG~vG~~~A~aLra~Gv~VtV~D~dp---~r~v~AvaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGI 353 (718)
.|..+.+...+++++|+.|+.+...+ .....+++++. ...+. .+.+.++.|++|||
T Consensus 102 ~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a-------~~~~l--------------~~~~~~l~g~~v~I 160 (293)
T 3d4o_A 102 SGISNTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGT-------IMMAI--------------QHTDFTIHGANVAV 160 (293)
T ss_dssp ESSCCHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHH-------HHHHH--------------HHCSSCSTTCEEEE
T ss_pred ecCCCHHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHH-------HHHHH--------------HhcCCCCCCCEEEE
Confidence 34455665457899999998765422 11222222211 11111 12357899999999
Q ss_pred EecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee---cCHHHHhccCcEEEEcCCCCCCcCHHHHhcCCCCeE
Q psy7896 354 AGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV---TTMEEAAKEGGIFVTTTGCKDIIRGEHFLQMRDDAI 430 (718)
Q Consensus 354 IG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v---~~Leell~~aDiIi~atgt~~lI~~e~l~~MK~gAi 430 (718)
||+|+||+.+|++++++|++|+++|+++.+...+...|..+ .+++++++++|+|++++.. ++++++.++.||++++
T Consensus 161 iG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-~~i~~~~l~~mk~~~~ 239 (293)
T 3d4o_A 161 LGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPA-LVVTANVLAEMPSHTF 239 (293)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSS-CCBCHHHHHHSCTTCE
T ss_pred EeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCCh-HHhCHHHHHhcCCCCE
Confidence 99999999999999999999999998875433333346554 4788999999999999865 7999999999999999
Q ss_pred EEEcCCCCccccHHHHh
Q psy7896 431 VCNIGHFDCEIQVSWLD 447 (718)
Q Consensus 431 LIN~GRgd~Eid~~aL~ 447 (718)
+||++|+...++++...
T Consensus 240 lin~ar~~~~~~~~~a~ 256 (293)
T 3d4o_A 240 VIDLASKPGGTDFRYAE 256 (293)
T ss_dssp EEECSSTTCSBCHHHHH
T ss_pred EEEecCCCCCCCHHHHH
Confidence 99999986666664433
No 51
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.49 E-value=2.3e-13 Score=142.84 Aligned_cols=154 Identities=12% Similarity=0.120 Sum_probs=110.4
Q ss_pred CcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHHHHHHHHHhcccccccchhhhhhhcccccC
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAG 348 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~G 348 (718)
++.+. .|+ ...++..+++++|+.|+.++..+.. .+.|++.... +.|.. .....+.++.|
T Consensus 99 l~~i~-~g~--~~~d~~~~~~~~gi~v~~~~~~~~v---------~~~r~~~~~~--------g~~~~-~~~~~~~~l~g 157 (300)
T 2rir_A 99 HCVIF-SGI--SNAYLENIAAQAKRKLVKLFERDDI---------AIYNSIPTVE--------GTIML-AIQHTDYTIHG 157 (300)
T ss_dssp TCEEE-ESS--CCHHHHHHHHHTTCCEEEGGGSHHH---------HHHHHHHHHH--------HHHHH-HHHTCSSCSTT
T ss_pred CCEEE-Eec--CCHHHHHHHHHCCCEEEeecCCCce---------EEEcCccHHH--------HHHHH-HHHhcCCCCCC
Confidence 44433 555 5566556789999999987654311 1222221110 01100 11235789999
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee---cCHHHHhccCcEEEEcCCCCCCcCHHHHhcC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV---TTMEEAAKEGGIFVTTTGCKDIIRGEHFLQM 425 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v---~~Leell~~aDiIi~atgt~~lI~~e~l~~M 425 (718)
++|||||+|+||+.+|++++++|++|+++|+++.+.......|... .+++++++++|+|+++++. ++++++.++.|
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-~~i~~~~~~~m 236 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPS-MILNQTVLSSM 236 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-CCBCHHHHTTS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-hhhCHHHHHhC
Confidence 9999999999999999999999999999998875433222345543 5789999999999999876 79999999999
Q ss_pred CCCeEEEEcCCCCccccHH
Q psy7896 426 RDDAIVCNIGHFDCEIQVS 444 (718)
Q Consensus 426 K~gAiLIN~GRgd~Eid~~ 444 (718)
|+++++||++|+....+++
T Consensus 237 k~g~~lin~a~g~~~~~~~ 255 (300)
T 2rir_A 237 TPKTLILDLASRPGGTDFK 255 (300)
T ss_dssp CTTCEEEECSSTTCSBCHH
T ss_pred CCCCEEEEEeCCCCCcCHH
Confidence 9999999999986555553
No 52
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.22 E-value=1.5e-10 Score=126.91 Aligned_cols=94 Identities=22% Similarity=0.258 Sum_probs=78.7
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec----------------------------C
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT----------------------------T 396 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~----------------------------~ 396 (718)
++.|++|+|+|+|.||+.+++.|+++|++|+++|+++.+..++...|..+. +
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 169 KVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 688999999999999999999999999999999998876444433465433 2
Q ss_pred HHHHhccCcEEEEcC---C--CCCCcCHHHHhcCCCCeEEEEcC--CCC
Q psy7896 397 MEEAAKEGGIFVTTT---G--CKDIIRGEHFLQMRDDAIVCNIG--HFD 438 (718)
Q Consensus 397 Leell~~aDiIi~at---g--t~~lI~~e~l~~MK~gAiLIN~G--Rgd 438 (718)
++++++.+|+|+.++ + +.++++++.++.||+|+++||+| ++.
T Consensus 249 l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg 297 (401)
T 1x13_A 249 FAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGG 297 (401)
T ss_dssp HHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTC
T ss_pred HHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCC
Confidence 678888999999884 3 45789999999999999999999 654
No 53
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.19 E-value=3.6e-10 Score=122.88 Aligned_cols=94 Identities=17% Similarity=0.220 Sum_probs=78.6
Q ss_pred ccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec---C------------------------
Q psy7896 344 IMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT---T------------------------ 396 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~---~------------------------ 396 (718)
..+.|++|+|+|+|.||+.+++.++++|++|+++|+++.+...+...|..+. .
T Consensus 168 ~~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~ 247 (384)
T 1l7d_A 168 GTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ 247 (384)
T ss_dssp EEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence 3689999999999999999999999999999999998876544434554433 1
Q ss_pred ---HHHHhccCcEEEEcC---C--CCCCcCHHHHhcCCCCeEEEEcC--CC
Q psy7896 397 ---MEEAAKEGGIFVTTT---G--CKDIIRGEHFLQMRDDAIVCNIG--HF 437 (718)
Q Consensus 397 ---Leell~~aDiIi~at---g--t~~lI~~e~l~~MK~gAiLIN~G--Rg 437 (718)
++++++.+|+|+.++ + ++++++.+.++.||+|++++|+| ++
T Consensus 248 ~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~g 298 (384)
T 1l7d_A 248 AEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAG 298 (384)
T ss_dssp HHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGT
T ss_pred HHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCC
Confidence 678889999999887 5 34689999999999999999999 54
No 54
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.09 E-value=1.6e-09 Score=118.04 Aligned_cols=156 Identities=19% Similarity=0.212 Sum_probs=100.7
Q ss_pred CChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHHHHHHHHHhccc-ccccchhhhhhhcccccCcEEEEEecCh
Q psy7896 280 VGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEVAALHLEHLGVK-LTKLTEDQAKYLDIMLAGKVAVVAGYGD 358 (718)
Q Consensus 280 vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i~~~~l~~lgv~-~~~~~~~~~~~~g~eL~GktVGIIG~G~ 358 (718)
-+....+.|.++|+...-+|.-|........+.+...-+++...-...+.. +.+.....-.. -..+.+++|+|||+|.
T Consensus 116 ~~~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iAGy~Av~~aa~~l~~~~~~l~~~-~~~v~~~kV~ViG~G~ 194 (381)
T 3p2y_A 116 TQPELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAGYKAVLLGASLSTRFVPMLTTA-AGTVKPASALVLGVGV 194 (381)
T ss_dssp TCHHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHHHHHHHHHHHHHCSSCSSCEECS-SCEECCCEEEEESCSH
T ss_pred cCHHHHHHHHHCCCeEEEeeccccccccccceeecchhHHHHHHHHHHHHHHhhhhhhhhhcc-cCCcCCCEEEEECchH
Confidence 357778889999998887877663211111222221111211100000000 00000000000 1246899999999999
Q ss_pred hHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec--------------------------CHHHHhccCcEEEEcC-
Q psy7896 359 VGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT--------------------------TMEEAAKEGGIFVTTT- 411 (718)
Q Consensus 359 IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~--------------------------~Leell~~aDiIi~at- 411 (718)
||..+|+.++++|++|+++|+++.+..++...|..+. +++++++++|+||++.
T Consensus 195 iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~ 274 (381)
T 3p2y_A 195 AGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAITKFDIVITTAL 274 (381)
T ss_dssp HHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHHhcCCEEEECCC
Confidence 9999999999999999999999876544444454432 4678899999999863
Q ss_pred --C--CCCCcCHHHHhcCCCCeEEEEcCC
Q psy7896 412 --G--CKDIIRGEHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 412 --g--t~~lI~~e~l~~MK~gAiLIN~GR 436 (718)
+ +..+|+++.++.||+|+++||++-
T Consensus 275 iPg~~ap~Lvt~emv~~MkpGsVIVDvA~ 303 (381)
T 3p2y_A 275 VPGRPAPRLVTAAAATGMQPGSVVVDLAG 303 (381)
T ss_dssp CTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred CCCcccceeecHHHHhcCCCCcEEEEEeC
Confidence 2 457899999999999999999984
No 55
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.07 E-value=1e-09 Score=119.19 Aligned_cols=92 Identities=18% Similarity=0.206 Sum_probs=76.1
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhh-cCce-------ecCHHHHhccCcEEEEcC-----
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASM-EGYE-------VTTMEEAAKEGGIFVTTT----- 411 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~-~G~~-------v~~Leell~~aDiIi~at----- 411 (718)
++.|++|+|+|+|.||+.+|+.++++|++|+++|+++.+...+.. .|.. ..+++++++.+|+|+.++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~ 244 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA 244 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 689999999999999999999999999999999988765332222 2332 235778899999999864
Q ss_pred CCCCCcCHHHHhcCCCCeEEEEcCC
Q psy7896 412 GCKDIIRGEHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 412 gt~~lI~~e~l~~MK~gAiLIN~GR 436 (718)
.++++|+++.++.||+++++||+|.
T Consensus 245 ~t~~li~~~~l~~mk~g~~iV~va~ 269 (377)
T 2vhw_A 245 KAPKLVSNSLVAHMKPGAVLVDIAI 269 (377)
T ss_dssp CCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred CCcceecHHHHhcCCCCcEEEEEec
Confidence 3567899999999999999999993
No 56
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.05 E-value=4.3e-09 Score=115.60 Aligned_cols=150 Identities=17% Similarity=0.195 Sum_probs=100.2
Q ss_pred CChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHHHHHH-----HHHhcccccccchhhhhhh--cccccCcEEE
Q psy7896 280 VGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEVAALH-----LEHLGVKLTKLTEDQAKYL--DIMLAGKVAV 352 (718)
Q Consensus 280 vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i~~~~-----l~~lgv~~~~~~~~~~~~~--g~eL~GktVG 352 (718)
-+....+.|.++|+...-+|.-|..........+...-+++... ..++++.++ -.+ -..+.+.+|+
T Consensus 122 ~~~~l~~~l~~~~it~ia~E~i~r~~ra~~l~~ls~~s~iAGy~Av~~aa~~l~~~~~-------~l~t~~g~v~~~kV~ 194 (405)
T 4dio_A 122 GNEEAISAMAGAGLTTFAMELMPRITRAQSMDVLSSQANLAGYQAVIDAAYEYDRALP-------MMMTAAGTVPAAKIF 194 (405)
T ss_dssp TCHHHHHHHHHTTCEEEEGGGSCCSGGGGGGCHHHHHHHHHHHHHHHHHHHHCSSCSS-------CEEETTEEECCCEEE
T ss_pred cCHHHHHHHHHCCCeEEEeeccccccccCccceecchhHHHHHHHHHHHHHHhHhhhc-------hhhccCCCcCCCEEE
Confidence 36778889999999888888766321111111111111111100 000111110 001 1247899999
Q ss_pred EEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee------------------------------cCHHHHhc
Q psy7896 353 VAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV------------------------------TTMEEAAK 402 (718)
Q Consensus 353 IIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v------------------------------~~Leell~ 402 (718)
|+|+|.||..+|+.++++|++|+++|+++.+...+...|..+ .+++++++
T Consensus 195 ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~e~l~ 274 (405)
T 4dio_A 195 VMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALVAEHIA 274 (405)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHHHHHHH
T ss_pred EECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHHHHHhc
Confidence 999999999999999999999999999987643333334332 15678899
Q ss_pred cCcEEEEc---C--CCCCCcCHHHHhcCCCCeEEEEcCC
Q psy7896 403 EGGIFVTT---T--GCKDIIRGEHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 403 ~aDiIi~a---t--gt~~lI~~e~l~~MK~gAiLIN~GR 436 (718)
++|+||++ + ....+|+++.++.||+|+++||++-
T Consensus 275 ~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 275 KQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp TCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred CCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence 99999987 3 3567899999999999999999983
No 57
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=98.97 E-value=1.6e-09 Score=117.18 Aligned_cols=95 Identities=19% Similarity=0.254 Sum_probs=80.1
Q ss_pred hcc-cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhc-cCcEEEEcCCCCCCcCH
Q psy7896 342 LDI-MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAK-EGGIFVTTTGCKDIIRG 419 (718)
Q Consensus 342 ~g~-eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~-~aDiIi~atgt~~lI~~ 419 (718)
.|. ++.||||+|+|+|+||+.+|++|+.+||+|+++|+++.+...+...|.+.++.++++. +|||++.+ .+.++|+.
T Consensus 168 ~G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~-A~~~~I~~ 246 (355)
T 1c1d_A 168 RGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPC-AMGGVITT 246 (355)
T ss_dssp TTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEEC-SCSCCBCH
T ss_pred cCCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHh-HHHhhcCH
Confidence 366 7999999999999999999999999999999999887542112234667778889988 89999875 57789999
Q ss_pred HHHhcCCCCeEEEEcCCCC
Q psy7896 420 EHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 420 e~l~~MK~gAiLIN~GRgd 438 (718)
+.++.|| ..+++|.+++.
T Consensus 247 ~~~~~lk-~~iVie~AN~p 264 (355)
T 1c1d_A 247 EVARTLD-CSVVAGAANNV 264 (355)
T ss_dssp HHHHHCC-CSEECCSCTTC
T ss_pred HHHhhCC-CCEEEECCCCC
Confidence 9999998 68999999985
No 58
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=98.77 E-value=5.7e-08 Score=104.96 Aligned_cols=93 Identities=13% Similarity=0.232 Sum_probs=74.3
Q ss_pred ccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhh-cCce-------ecCHHHHhccCcEEEEcCC---
Q psy7896 344 IMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASM-EGYE-------VTTMEEAAKEGGIFVTTTG--- 412 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~-~G~~-------v~~Leell~~aDiIi~atg--- 412 (718)
..+.+++|+|+|.|.||+.+++.++++|++|+++|+++.+...+.. .|.. ..+++++++.+|+|+.+++
T Consensus 162 ~~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~ 241 (369)
T 2eez_A 162 PGVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPG 241 (369)
T ss_dssp TBBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC---
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCc
Confidence 3689999999999999999999999999999999988765332221 2332 2356788899999998865
Q ss_pred --CCCCcCHHHHhcCCCCeEEEEcCC
Q psy7896 413 --CKDIIRGEHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 413 --t~~lI~~e~l~~MK~gAiLIN~GR 436 (718)
+.++++.+.++.||+++++||+|.
T Consensus 242 ~~~~~li~~~~l~~mk~gg~iV~v~~ 267 (369)
T 2eez_A 242 AKAPKLVTRDMLSLMKEGAVIVDVAV 267 (369)
T ss_dssp ----CCSCHHHHTTSCTTCEEEECC-
T ss_pred cccchhHHHHHHHhhcCCCEEEEEec
Confidence 346789999999999999999985
No 59
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=98.73 E-value=2.8e-09 Score=117.73 Aligned_cols=96 Identities=20% Similarity=0.239 Sum_probs=71.3
Q ss_pred hccc-ccCcEEEEEecChhHHHHHHHHHh-CCCEEEEEe-cCCccHHHHhhcCceecCHHHHhccCc---EEEEcCCCCC
Q psy7896 342 LDIM-LAGKVAVVAGYGDVGKGCAQSLRL-FGSRVIVTE-IDPINALQASMEGYEVTTMEEAAKEGG---IFVTTTGCKD 415 (718)
Q Consensus 342 ~g~e-L~GktVGIIG~G~IG~~vA~~l~~-fGa~Viv~d-~dp~~al~a~~~G~~v~~Leell~~aD---iIi~atgt~~ 415 (718)
.|.+ |+||||+|+|+|+||+.+|+++++ |||+|+++. .+.. . ....-.+++++++.+| .++..+++++
T Consensus 205 ~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~--~----~~~~gvdl~~L~~~~d~~~~l~~l~~t~~ 278 (419)
T 1gtm_A 205 LGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGG--I----YNPDGLNADEVLKWKNEHGSVKDFPGATN 278 (419)
T ss_dssp TTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCE--E----EEEEEECHHHHHHHHHHHSSSTTCTTSEE
T ss_pred hCCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCcc--c----cCccCCCHHHHHHHHHhcCEeecCccCee
Confidence 5778 999999999999999999999999 999999884 3321 0 0011236777766444 3322245777
Q ss_pred CcCHHHHhcCCCCeEEEEcCCCCccccHHHH
Q psy7896 416 IIRGEHFLQMRDDAIVCNIGHFDCEIQVSWL 446 (718)
Q Consensus 416 lI~~e~l~~MK~gAiLIN~GRgd~Eid~~aL 446 (718)
|+.+.|..||+ .+|||+||++ .+|.+++
T Consensus 279 -i~~~~l~~mk~-dilIn~ArG~-~Vde~a~ 306 (419)
T 1gtm_A 279 -ITNEELLELEV-DVLAPAAIEE-VITKKNA 306 (419)
T ss_dssp -ECHHHHHHSCC-SEEEECSCSC-CBCTTGG
T ss_pred -eCHHHHHhCCC-CEEEECCCcc-cCCHHHH
Confidence 89999999998 5999999996 5776554
No 60
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.51 E-value=1.6e-07 Score=101.86 Aligned_cols=94 Identities=18% Similarity=0.292 Sum_probs=76.2
Q ss_pred cc-cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHH-hhcCceecCHHHHhc-cCcEEEEcCCCCCCcCH
Q psy7896 343 DI-MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA-SMEGYEVTTMEEAAK-EGGIFVTTTGCKDIIRG 419 (718)
Q Consensus 343 g~-eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a-~~~G~~v~~Leell~-~aDiIi~atgt~~lI~~ 419 (718)
|. +|.||+|+|+|+|+||+.+|+.|..+|++|+++|+++.+..+. ...|....+.++++. ++||++.+. +.++|+.
T Consensus 167 G~~~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~ll~~~~DIvip~a-~~~~I~~ 245 (364)
T 1leh_A 167 GSDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCA-LGAVLND 245 (364)
T ss_dssp SSCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECS-CSCCBST
T ss_pred cccCCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHHhccCCcEeeccc-hHHHhCH
Confidence 44 7999999999999999999999999999999999887543321 122556677788776 899999874 6679999
Q ss_pred HHHhcCCCCeEEEEcCCCC
Q psy7896 420 EHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 420 e~l~~MK~gAiLIN~GRgd 438 (718)
+.++.|+ ..+++|.+++.
T Consensus 246 ~~~~~lg-~~iV~e~An~p 263 (364)
T 1leh_A 246 FTIPQLK-AKVIAGSADNQ 263 (364)
T ss_dssp THHHHCC-CSEECCSCSCC
T ss_pred HHHHhCC-CcEEEeCCCCC
Confidence 9999995 46888988875
No 61
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.50 E-value=2.6e-07 Score=103.37 Aligned_cols=99 Identities=20% Similarity=0.207 Sum_probs=75.0
Q ss_pred hhhhhhcccccC-cEEEEEecChhHHHHHHHHHhC------CCEEEEEecC-CccHHHHhhcCcee-----cCHHHHhcc
Q psy7896 337 DQAKYLDIMLAG-KVAVVAGYGDVGKGCAQSLRLF------GSRVIVTEID-PINALQASMEGYEV-----TTMEEAAKE 403 (718)
Q Consensus 337 ~~~~~~g~eL~G-ktVGIIG~G~IG~~vA~~l~~f------Ga~Viv~d~d-p~~al~a~~~G~~v-----~~Leell~~ 403 (718)
|+.......|+| |+|||||+|.+|.++|+.|+.. |.+|++.++. +.....+...|+.. .++.|++++
T Consensus 42 w~~~~~~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ 121 (525)
T 3fr7_A 42 NLFPLLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSG 121 (525)
T ss_dssp GGGGGHHHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHH
T ss_pred cccccChHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhc
Confidence 333344577999 9999999999999999999987 9999876554 33333455678764 689999999
Q ss_pred CcEEEEcCCC---CCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 404 GGIFVTTTGC---KDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 404 aDiIi~atgt---~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
||+|+++... ..++. +.+..||+|++| -.++|
T Consensus 122 ADVVILaVP~~~~~eVl~-eI~p~LK~GaIL-s~AaG 156 (525)
T 3fr7_A 122 SDLVLLLISDAAQADNYE-KIFSHMKPNSIL-GLSHG 156 (525)
T ss_dssp CSEEEECSCHHHHHHHHH-HHHHHSCTTCEE-EESSS
T ss_pred CCEEEECCChHHHHHHHH-HHHHhcCCCCeE-EEeCC
Confidence 9999998653 23454 677899999996 44554
No 62
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.49 E-value=4.6e-07 Score=95.20 Aligned_cols=81 Identities=28% Similarity=0.373 Sum_probs=71.1
Q ss_pred hhcccccCcEEEEEecCh-hHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcCCCCCCcCH
Q psy7896 341 YLDIMLAGKVAVVAGYGD-VGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCKDIIRG 419 (718)
Q Consensus 341 ~~g~eL~GktVGIIG~G~-IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~~lI~~ 419 (718)
+.+.++.||++.|||.|+ +|+.+|+.|.+.|++|+++++.. .++++.+++||+||.+++..++|+.
T Consensus 154 ~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T-------------~~L~~~~~~ADIVI~Avg~p~~I~~ 220 (286)
T 4a5o_A 154 STGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT-------------RDLADHVSRADLVVVAAGKPGLVKG 220 (286)
T ss_dssp HTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC-------------SCHHHHHHTCSEEEECCCCTTCBCG
T ss_pred HhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC-------------cCHHHHhccCCEEEECCCCCCCCCH
Confidence 346789999999999987 79999999999999999996432 3688999999999999999999998
Q ss_pred HHHhcCCCCeEEEEcCCC
Q psy7896 420 EHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 420 e~l~~MK~gAiLIN~GRg 437 (718)
+.+ |+|+++|++|..
T Consensus 221 ~~v---k~GavVIDvgi~ 235 (286)
T 4a5o_A 221 EWI---KEGAIVIDVGIN 235 (286)
T ss_dssp GGS---CTTCEEEECCSC
T ss_pred HHc---CCCeEEEEeccc
Confidence 654 999999999864
No 63
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.48 E-value=4.2e-07 Score=95.46 Aligned_cols=79 Identities=27% Similarity=0.512 Sum_probs=70.3
Q ss_pred hcccccCcEEEEEecCh-hHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcCCCCCCcCHH
Q psy7896 342 LDIMLAGKVAVVAGYGD-VGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCKDIIRGE 420 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~-IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~~lI~~e 420 (718)
.+.++.||++.|||.|+ +|+.+|+.|.+.|++|+++++.. .++.+.+++|||||.+++..++|+.+
T Consensus 154 ~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t-------------~~L~~~~~~ADIVI~Avg~p~~I~~~ 220 (285)
T 3p2o_A 154 YEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT-------------KDLSLYTRQADLIIVAAGCVNLLRSD 220 (285)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SCHHHHHTTCSEEEECSSCTTCBCGG
T ss_pred hCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc-------------hhHHHHhhcCCEEEECCCCCCcCCHH
Confidence 46789999999999998 69999999999999999996532 36889999999999999999999986
Q ss_pred HHhcCCCCeEEEEcCC
Q psy7896 421 HFLQMRDDAIVCNIGH 436 (718)
Q Consensus 421 ~l~~MK~gAiLIN~GR 436 (718)
. +|+|+++|++|.
T Consensus 221 ~---vk~GavVIDVgi 233 (285)
T 3p2o_A 221 M---VKEGVIVVDVGI 233 (285)
T ss_dssp G---SCTTEEEEECCC
T ss_pred H---cCCCeEEEEecc
Confidence 5 599999999986
No 64
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.45 E-value=5.1e-07 Score=94.84 Aligned_cols=79 Identities=24% Similarity=0.352 Sum_probs=70.1
Q ss_pred hcccccCcEEEEEecCh-hHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcCCCCCCcCHH
Q psy7896 342 LDIMLAGKVAVVAGYGD-VGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCKDIIRGE 420 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~-IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~~lI~~e 420 (718)
.+.++.||++.|||.|+ +|+.+|+.|.+.|++|+++++.. .++++.++++|+||.+++..++|+.+
T Consensus 155 ~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------~~L~~~~~~ADIVI~Avg~p~~I~~~ 221 (285)
T 3l07_A 155 YGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT-------------TDLKSHTTKADILIVAVGKPNFITAD 221 (285)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SSHHHHHTTCSEEEECCCCTTCBCGG
T ss_pred hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-------------hhHHHhcccCCEEEECCCCCCCCCHH
Confidence 46789999999999998 69999999999999999986432 36889999999999999999999986
Q ss_pred HHhcCCCCeEEEEcCC
Q psy7896 421 HFLQMRDDAIVCNIGH 436 (718)
Q Consensus 421 ~l~~MK~gAiLIN~GR 436 (718)
. +|+|+++|++|.
T Consensus 222 ~---vk~GavVIDvgi 234 (285)
T 3l07_A 222 M---VKEGAVVIDVGI 234 (285)
T ss_dssp G---SCTTCEEEECCC
T ss_pred H---cCCCcEEEEecc
Confidence 5 599999999986
No 65
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.44 E-value=4.4e-07 Score=95.40 Aligned_cols=80 Identities=25% Similarity=0.379 Sum_probs=71.1
Q ss_pred hcccccCcEEEEEecCh-hHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcCCCCCCcCHH
Q psy7896 342 LDIMLAGKVAVVAGYGD-VGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCKDIIRGE 420 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~-IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~~lI~~e 420 (718)
.+.++.||++.|||.|+ +|+.+|+.|.+.|++|++++... .++.+.+++||+||.+++..++|+.+
T Consensus 153 ~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------~~L~~~~~~ADIVI~Avg~p~lI~~~ 219 (288)
T 1b0a_A 153 YNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT-------------KNLRHHVENADLLIVAVGKPGFIPGD 219 (288)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC-------------SCHHHHHHHCSEEEECSCCTTCBCTT
T ss_pred cCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc-------------hhHHHHhccCCEEEECCCCcCcCCHH
Confidence 46789999999999997 69999999999999999996433 36889999999999999999999987
Q ss_pred HHhcCCCCeEEEEcCCC
Q psy7896 421 HFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 421 ~l~~MK~gAiLIN~GRg 437 (718)
. +|+|+++|++|.-
T Consensus 220 ~---vk~GavVIDVgi~ 233 (288)
T 1b0a_A 220 W---IKEGAIVIDVGIN 233 (288)
T ss_dssp T---SCTTCEEEECCCE
T ss_pred H---cCCCcEEEEccCC
Confidence 6 4999999999963
No 66
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.44 E-value=3.8e-07 Score=84.92 Aligned_cols=88 Identities=17% Similarity=0.258 Sum_probs=70.0
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHH-HhhcCce---ecCHHHHhccCcEEEEcCCCCC-CcCHHH
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQ-ASMEGYE---VTTMEEAAKEGGIFVTTTGCKD-IIRGEH 421 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~-a~~~G~~---v~~Leell~~aDiIi~atgt~~-lI~~e~ 421 (718)
.|++|+|||.|.+|+.+++.|..+|++|+++++++.+... +...|.. ..+++++++++|+|+++++..+ +++.
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~~~~~~-- 97 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKTPIVEE-- 97 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSSCSBCG--
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCCcEeeH--
Confidence 3899999999999999999999999999999998865432 2222333 3478899999999999987654 4543
Q ss_pred HhcCCCCeEEEEcCCC
Q psy7896 422 FLQMRDDAIVCNIGHF 437 (718)
Q Consensus 422 l~~MK~gAiLIN~GRg 437 (718)
+.++++.+++++|..
T Consensus 98 -~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 98 -RSLMPGKLFIDLGNP 112 (144)
T ss_dssp -GGCCTTCEEEECCSS
T ss_pred -HHcCCCCEEEEccCC
Confidence 567899999999874
No 67
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.40 E-value=8.6e-07 Score=93.75 Aligned_cols=81 Identities=27% Similarity=0.415 Sum_probs=71.4
Q ss_pred hhcccccCcEEEEEecCh-hHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcCCCCCCcCH
Q psy7896 341 YLDIMLAGKVAVVAGYGD-VGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCKDIIRG 419 (718)
Q Consensus 341 ~~g~eL~GktVGIIG~G~-IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~~lI~~ 419 (718)
+.+.++.||++.|||.|+ +|+.+|+.|.+.|++|++++.. ..++.+.+++||+||.+++..++|+.
T Consensus 158 ~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~-------------t~~L~~~~~~ADIVI~Avg~p~~I~~ 224 (301)
T 1a4i_A 158 ETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK-------------TAHLDEEVNKGDILVVATGQPEMVKG 224 (301)
T ss_dssp TTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT-------------CSSHHHHHTTCSEEEECCCCTTCBCG
T ss_pred HcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC-------------cccHHHHhccCCEEEECCCCcccCCH
Confidence 346789999999999997 6999999999999999999643 23688999999999999999999998
Q ss_pred HHHhcCCCCeEEEEcCCC
Q psy7896 420 EHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 420 e~l~~MK~gAiLIN~GRg 437 (718)
+. +|+|+++|++|.-
T Consensus 225 ~~---vk~GavVIDVgi~ 239 (301)
T 1a4i_A 225 EW---IKPGAIVIDCGIN 239 (301)
T ss_dssp GG---SCTTCEEEECCCB
T ss_pred HH---cCCCcEEEEccCC
Confidence 76 5899999999973
No 68
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.39 E-value=6.9e-07 Score=93.44 Aligned_cols=75 Identities=15% Similarity=0.202 Sum_probs=67.7
Q ss_pred ccCcEEEEEecCh-hHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcCCCCCCcCHHHHhc
Q psy7896 346 LAGKVAVVAGYGD-VGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCKDIIRGEHFLQ 424 (718)
Q Consensus 346 L~GktVGIIG~G~-IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~~lI~~e~l~~ 424 (718)
+.||++.|||.|+ +|+.+|+.|.+.|++|+++++. ..++.+.+++||+|+.+++..++|+++.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~-------------t~~L~~~~~~ADIVI~Avg~p~~I~~~~--- 211 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK-------------TKDIGSMTRSSKIVVVAVGRPGFLNREM--- 211 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT-------------CSCHHHHHHHSSEEEECSSCTTCBCGGG---
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC-------------cccHHHhhccCCEEEECCCCCccccHhh---
Confidence 8999999999997 7999999999999999999653 2468899999999999999999999865
Q ss_pred CCCCeEEEEcCC
Q psy7896 425 MRDDAIVCNIGH 436 (718)
Q Consensus 425 MK~gAiLIN~GR 436 (718)
+|+|+++|++|.
T Consensus 212 vk~GavVIDvgi 223 (276)
T 3ngx_A 212 VTPGSVVIDVGI 223 (276)
T ss_dssp CCTTCEEEECCC
T ss_pred ccCCcEEEEecc
Confidence 599999999996
No 69
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.39 E-value=7.8e-07 Score=93.26 Aligned_cols=80 Identities=23% Similarity=0.351 Sum_probs=70.8
Q ss_pred hcccccCcEEEEEecChh-HHHHHHHHHhC--CCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcCCCCCCcC
Q psy7896 342 LDIMLAGKVAVVAGYGDV-GKGCAQSLRLF--GSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCKDIIR 418 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~I-G~~vA~~l~~f--Ga~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~~lI~ 418 (718)
.+.++.||++.|||.|+| |+.+|+.|.+. |++|+++++.. .++.+.++++|+||.+++..++|+
T Consensus 152 ~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t-------------~~L~~~~~~ADIVI~Avg~p~~I~ 218 (281)
T 2c2x_A 152 YDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT-------------RDLPALTRQADIVVAAVGVAHLLT 218 (281)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC-------------SCHHHHHTTCSEEEECSCCTTCBC
T ss_pred cCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch-------------hHHHHHHhhCCEEEECCCCCcccC
Confidence 467899999999999985 99999999999 99999996433 368899999999999999999999
Q ss_pred HHHHhcCCCCeEEEEcCCC
Q psy7896 419 GEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 419 ~e~l~~MK~gAiLIN~GRg 437 (718)
.+. +|+|+++|++|.-
T Consensus 219 ~~~---vk~GavVIDVgi~ 234 (281)
T 2c2x_A 219 ADM---VRPGAAVIDVGVS 234 (281)
T ss_dssp GGG---SCTTCEEEECCEE
T ss_pred HHH---cCCCcEEEEccCC
Confidence 876 4899999999964
No 70
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.39 E-value=6.8e-07 Score=94.51 Aligned_cols=79 Identities=27% Similarity=0.397 Sum_probs=69.4
Q ss_pred hcccccCcEEEEEecCh-hHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHH--HHhccCcEEEEcCCCCCCcC
Q psy7896 342 LDIMLAGKVAVVAGYGD-VGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTME--EAAKEGGIFVTTTGCKDIIR 418 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~-IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Le--ell~~aDiIi~atgt~~lI~ 418 (718)
.+.++.||++.|||.|+ +|+.+|+.|.+.|++|+++++... +++ +.+++|||||.+++..++|+
T Consensus 159 ~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~-------------~l~l~~~~~~ADIVI~Avg~p~~I~ 225 (300)
T 4a26_A 159 CGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS-------------TEDMIDYLRTADIVIAAMGQPGYVK 225 (300)
T ss_dssp HTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC-------------HHHHHHHHHTCSEEEECSCCTTCBC
T ss_pred cCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC-------------CchhhhhhccCCEEEECCCCCCCCc
Confidence 46789999999999988 699999999999999999976332 355 88999999999999999999
Q ss_pred HHHHhcCCCCeEEEEcCC
Q psy7896 419 GEHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 419 ~e~l~~MK~gAiLIN~GR 436 (718)
.+. +|+|+++|++|.
T Consensus 226 ~~~---vk~GavVIDvgi 240 (300)
T 4a26_A 226 GEW---IKEGAAVVDVGT 240 (300)
T ss_dssp GGG---SCTTCEEEECCC
T ss_pred HHh---cCCCcEEEEEec
Confidence 865 599999999986
No 71
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=98.35 E-value=4.1e-07 Score=97.21 Aligned_cols=91 Identities=20% Similarity=0.264 Sum_probs=72.0
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccH-HHHhhcCceecCHHHHhccCcEEEEcCCCC---CCcCHH
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINA-LQASMEGYEVTTMEEAAKEGGIFVTTTGCK---DIIRGE 420 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~a-l~a~~~G~~v~~Leell~~aDiIi~atgt~---~lI~~e 420 (718)
.+.+++|+|||+|.||..+|+.++..|.+|+++++++... ..+...|+.+.+++++++++|+|++++... .++..+
T Consensus 13 ~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~~~~aDvVilavp~~~~~~v~~~~ 92 (338)
T 1np3_A 13 IIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEFQGRLYKEE 92 (338)
T ss_dssp HHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHHHHHHHHHH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHHHhcCCEEEEeCCcHHHHHHHHHH
Confidence 5788999999999999999999999999999999887542 234456777668999999999999987643 223323
Q ss_pred HHhcCCCCeEEEEcC
Q psy7896 421 HFLQMRDDAIVCNIG 435 (718)
Q Consensus 421 ~l~~MK~gAiLIN~G 435 (718)
....|+++++|+.++
T Consensus 93 i~~~l~~~~ivi~~~ 107 (338)
T 1np3_A 93 IEPNLKKGATLAFAH 107 (338)
T ss_dssp TGGGCCTTCEEEESC
T ss_pred HHhhCCCCCEEEEcC
Confidence 345689999999874
No 72
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=98.33 E-value=1.2e-06 Score=92.13 Aligned_cols=96 Identities=16% Similarity=0.071 Sum_probs=74.5
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEcCCCCC----Cc
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTTTGCKD----II 417 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~atgt~~----lI 417 (718)
.....-++|+|||+|.+|..+|+.|...|.+|+++|+++.+.......|... .+++++++.+|+|+++..+.. ++
T Consensus 16 ~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~ 95 (310)
T 3doj_A 16 PRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVV 95 (310)
T ss_dssp --CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred cccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHH
Confidence 3445568999999999999999999999999999999987655444556654 579999999999999865431 22
Q ss_pred --CHHHHhcCCCCeEEEEcCCCC
Q psy7896 418 --RGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 418 --~~e~l~~MK~gAiLIN~GRgd 438 (718)
..+.+..++++.++||++...
T Consensus 96 ~~~~~l~~~l~~g~~vv~~st~~ 118 (310)
T 3doj_A 96 FDKGGVLEQICEGKGYIDMSTVD 118 (310)
T ss_dssp HSTTCGGGGCCTTCEEEECSCCC
T ss_pred hCchhhhhccCCCCEEEECCCCC
Confidence 123346789999999999754
No 73
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.32 E-value=6.6e-07 Score=95.53 Aligned_cols=93 Identities=16% Similarity=0.231 Sum_probs=73.1
Q ss_pred hcccccCcEEEEEecChh-HHHHHHHHHhCCCEEEEEecCCccHHH---Hhhc-Ccee--------cCHHHHhccCcEEE
Q psy7896 342 LDIMLAGKVAVVAGYGDV-GKGCAQSLRLFGSRVIVTEIDPINALQ---ASME-GYEV--------TTMEEAAKEGGIFV 408 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~I-G~~vA~~l~~fGa~Viv~d~dp~~al~---a~~~-G~~v--------~~Leell~~aDiIi 408 (718)
.+.++.|+++.|||.|++ |+.+|+.|.+.|++|++++++..+... .... -... .++++.++++|+||
T Consensus 171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVI 250 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVI 250 (320)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred cCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEE
Confidence 356899999999999975 999999999999999999876432110 0000 0111 46889999999999
Q ss_pred EcCCCCCC-cCHHHHhcCCCCeEEEEcCCC
Q psy7896 409 TTTGCKDI-IRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 409 ~atgt~~l-I~~e~l~~MK~gAiLIN~GRg 437 (718)
++++..++ |+.+. +|+|+++|++|..
T Consensus 251 sAtg~p~~vI~~e~---vk~GavVIDVgi~ 277 (320)
T 1edz_A 251 TGVPSENYKFPTEY---IKEGAVCINFACT 277 (320)
T ss_dssp ECCCCTTCCBCTTT---SCTTEEEEECSSS
T ss_pred ECCCCCcceeCHHH---cCCCeEEEEcCCC
Confidence 99998887 88766 4999999999985
No 74
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.32 E-value=1.2e-06 Score=94.49 Aligned_cols=93 Identities=16% Similarity=0.145 Sum_probs=73.1
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCc-e-------ecCHHHHhccCcEEEEcCCC---
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGY-E-------VTTMEEAAKEGGIFVTTTGC--- 413 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~-~-------v~~Leell~~aDiIi~atgt--- 413 (718)
.+++++|+|+|.|.+|+.+++.|+.+|++|+++|+++.+...+...+. . ..++.+.++.+|+|+.+++.
T Consensus 164 ~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~ 243 (361)
T 1pjc_A 164 GVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGR 243 (361)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 377899999999999999999999999999999998865433322211 1 12456777899999988754
Q ss_pred --CCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 414 --KDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 414 --~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
..++..+.++.||++++++|++..
T Consensus 244 ~~~~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 244 RAPILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp SCCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred CCCeecCHHHHhhCCCCCEEEEEecC
Confidence 245788899999999999999863
No 75
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=98.31 E-value=1.1e-06 Score=96.04 Aligned_cols=92 Identities=24% Similarity=0.296 Sum_probs=73.4
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHH-HHhhcCcee---cCHHHHhccCcEEEEcCC-CCCCcC
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINAL-QASMEGYEV---TTMEEAAKEGGIFVTTTG-CKDIIR 418 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al-~a~~~G~~v---~~Leell~~aDiIi~atg-t~~lI~ 418 (718)
++.|++|+|||+|.||+.+++.++.+|+ +|+++++++.+.. .+...|..+ .+++++++.+|+|+.+++ +..+++
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~~~~~~ 243 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPHPVIH 243 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSSCCBC
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCCCceec
Confidence 5789999999999999999999999999 9999998876532 222234433 367788899999999876 456788
Q ss_pred HHHHhc--C----CCCeEEEEcCC
Q psy7896 419 GEHFLQ--M----RDDAIVCNIGH 436 (718)
Q Consensus 419 ~e~l~~--M----K~gAiLIN~GR 436 (718)
.+.++. | +++.+++|++.
T Consensus 244 ~~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 244 VDDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp HHHHHHHHHHCSSCCCEEEEECCS
T ss_pred HHHHHHHHHhccCCCCEEEEEccC
Confidence 888887 4 36789999986
No 76
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=98.31 E-value=5e-07 Score=94.88 Aligned_cols=95 Identities=15% Similarity=0.056 Sum_probs=74.9
Q ss_pred ccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEcCCCC----CCcC
Q psy7896 344 IMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTTTGCK----DIIR 418 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~atgt~----~lI~ 418 (718)
.++..++|||||+|.+|..+|+.|...|.+|+++|+++.+.......|... .+++++++++|+|+++..+. .++.
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~ 84 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG 84 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc
Confidence 345678999999999999999999999999999999886554444446554 57999999999999986542 2343
Q ss_pred HHHHhcCCCCeEEEEcCCCC
Q psy7896 419 GEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 419 ~e~l~~MK~gAiLIN~GRgd 438 (718)
.+.+..++++.++||++...
T Consensus 85 ~~~l~~~~~g~ivid~st~~ 104 (306)
T 3l6d_A 85 MPGVARALAHRTIVDYTTNA 104 (306)
T ss_dssp STTHHHHTTTCEEEECCCCC
T ss_pred ccchhhccCCCEEEECCCCC
Confidence 22456678999999999864
No 77
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=98.29 E-value=1.6e-06 Score=89.80 Aligned_cols=90 Identities=16% Similarity=0.133 Sum_probs=72.0
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEcCCCC----CCc--CHHH
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTTTGCK----DII--RGEH 421 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~atgt~----~lI--~~e~ 421 (718)
++|+|||+|.+|..+|+.+...|.+|+++|+++.+.......|... .+++++++++|+|+++..+. .++ ..+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 6899999999999999999999999999999987655444456654 47999999999999987642 122 1233
Q ss_pred HhcCCCCeEEEEcCCCC
Q psy7896 422 FLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 422 l~~MK~gAiLIN~GRgd 438 (718)
...++++.++||++...
T Consensus 82 ~~~l~~~~~vi~~st~~ 98 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVD 98 (287)
T ss_dssp HHHCCTTCEEEECSCCC
T ss_pred hhcCCCCCEEEeCCCCC
Confidence 46789999999998754
No 78
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=98.28 E-value=1.2e-06 Score=92.45 Aligned_cols=93 Identities=16% Similarity=0.184 Sum_probs=74.2
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEcCCCCC----CcCH-
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTTTGCKD----IIRG- 419 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~atgt~~----lI~~- 419 (718)
...++|+|||+|.+|..+|+.+...|.+|+++|+++.+.......|... .+++++++++|+|+++..+.. ++..
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~ 108 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQ 108 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTT
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcch
Confidence 4567999999999999999999999999999999887654444456654 589999999999999866421 2221
Q ss_pred HHHhcCCCCeEEEEcCCCC
Q psy7896 420 EHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 420 e~l~~MK~gAiLIN~GRgd 438 (718)
+.++.++++.++||++...
T Consensus 109 ~~~~~l~~~~~vi~~st~~ 127 (320)
T 4dll_A 109 GVAAAMKPGSLFLDMASIT 127 (320)
T ss_dssp CHHHHCCTTCEEEECSCCC
T ss_pred hHHhhCCCCCEEEecCCCC
Confidence 3456789999999999864
No 79
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=98.26 E-value=1e-06 Score=89.54 Aligned_cols=101 Identities=19% Similarity=0.219 Sum_probs=66.3
Q ss_pred hhhhhhhcccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCcc--------------HHHHh-h-cCceecCHHH
Q psy7896 336 EDQAKYLDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPIN--------------ALQAS-M-EGYEVTTMEE 399 (718)
Q Consensus 336 ~~~~~~~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~--------------al~a~-~-~G~~v~~Lee 399 (718)
+++.+....++.+++|||||+|++|..+|+.|...|.+|+++++++.+ ..... . .+....+..+
T Consensus 7 ~~~~~~~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 86 (245)
T 3dtt_A 7 HHHHHHENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFAD 86 (245)
T ss_dssp ------------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHH
T ss_pred cccccccccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHH
Confidence 344556678899999999999999999999999999999999998765 11111 1 2345668899
Q ss_pred HhccCcEEEEcCCCCCCcCH-HHH--hcCCCCeEEEEcCCC
Q psy7896 400 AAKEGGIFVTTTGCKDIIRG-EHF--LQMRDDAIVCNIGHF 437 (718)
Q Consensus 400 ll~~aDiIi~atgt~~lI~~-e~l--~~MK~gAiLIN~GRg 437 (718)
+++++|+|+++.....+... ..+ ..+ ++.++|+++-+
T Consensus 87 ~~~~aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s~~ 126 (245)
T 3dtt_A 87 VAAGAELVVNATEGASSIAALTAAGAENL-AGKILVDIANP 126 (245)
T ss_dssp HHHHCSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECCCC
T ss_pred HHhcCCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECCCC
Confidence 99999999998765433210 112 223 78999999843
No 80
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=98.23 E-value=1.3e-06 Score=90.40 Aligned_cols=90 Identities=14% Similarity=0.086 Sum_probs=71.5
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEcCCCCC----Cc-C-HHH
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTTTGCKD----II-R-GEH 421 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~atgt~~----lI-~-~e~ 421 (718)
++|+|||+|.+|..+|+.+...|.+|+++|+++.+.......|... .+++++++++|+|+++..+.. ++ . .+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 4799999999999999999999999999999987654444456654 479999999999999866531 22 1 233
Q ss_pred HhcCCCCeEEEEcCCCC
Q psy7896 422 FLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 422 l~~MK~gAiLIN~GRgd 438 (718)
+..++++.++||++...
T Consensus 82 ~~~l~~g~~vv~~st~~ 98 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVD 98 (287)
T ss_dssp GGTCCTTCEEEECSCCC
T ss_pred hhcccCCCEEEECCCCC
Confidence 46789999999999864
No 81
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=98.21 E-value=2e-06 Score=89.34 Aligned_cols=90 Identities=12% Similarity=0.149 Sum_probs=71.0
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEcCCCCC----CcCH--HH
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTTTGCKD----IIRG--EH 421 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~atgt~~----lI~~--e~ 421 (718)
++|+|||+|.+|..+|+.+...|.+|+++|+++.+.......|... .+++++++++|+|+++..+.. ++.. +.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 6899999999999999999999999999999886654444456654 579999999999999875422 1210 33
Q ss_pred HhcCCCCeEEEEcCCCC
Q psy7896 422 FLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 422 l~~MK~gAiLIN~GRgd 438 (718)
+..++++.+++|++...
T Consensus 84 ~~~l~~~~~vi~~st~~ 100 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIA 100 (302)
T ss_dssp GGSSCSSCEEEECSCCC
T ss_pred HhcCCCCcEEEECCCCC
Confidence 45789999999998764
No 82
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.20 E-value=3.3e-06 Score=86.56 Aligned_cols=91 Identities=25% Similarity=0.293 Sum_probs=70.3
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHH-hhcCceecCHHHHhccCcEEEEcCCCC------C
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA-SMEGYEVTTMEEAAKEGGIFVTTTGCK------D 415 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a-~~~G~~v~~Leell~~aDiIi~atgt~------~ 415 (718)
+.+++| +++|||.|.+|+.+++.+..+|++|+++++++.+.... ...|....+++++ +++|+|+++++.. .
T Consensus 112 ~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~~~~~~~~-~~~Divi~~tp~~~~~~~~~ 189 (263)
T 2d5c_A 112 GIPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLRAVPLEKA-REARLLVNATRVGLEDPSAS 189 (263)
T ss_dssp TCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCEECCGGGG-GGCSEEEECSSTTTTCTTCC
T ss_pred CCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccchhhHhhc-cCCCEEEEccCCCCCCCCCC
Confidence 457889 99999999999999999999999999999887543221 1223345578888 9999999987643 2
Q ss_pred CcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 416 IIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 416 lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
.+. .+.++++.++++++...
T Consensus 190 ~l~---~~~l~~g~~viD~~~~p 209 (263)
T 2d5c_A 190 PLP---AELFPEEGAAVDLVYRP 209 (263)
T ss_dssp SSC---GGGSCSSSEEEESCCSS
T ss_pred CCC---HHHcCCCCEEEEeecCC
Confidence 343 46789999999998754
No 83
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=98.20 E-value=1.6e-06 Score=90.58 Aligned_cols=91 Identities=16% Similarity=0.118 Sum_probs=71.5
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce--ecCHHHHhccCcEEEEcCCCCC----CcC--H
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE--VTTMEEAAKEGGIFVTTTGCKD----IIR--G 419 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~--v~~Leell~~aDiIi~atgt~~----lI~--~ 419 (718)
.++|+|||+|.+|..+|+.|...|.+|+++|+++.+.......|.. ..+++++++.+|+|+++..+.. ++. .
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 4689999999999999999999999999999988765444445654 4678999999999999866531 221 2
Q ss_pred HHHhcCCCCeEEEEcCCCC
Q psy7896 420 EHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 420 e~l~~MK~gAiLIN~GRgd 438 (718)
+....++++.++||++...
T Consensus 87 ~l~~~l~~g~ivv~~st~~ 105 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTIS 105 (303)
T ss_dssp CCGGGSCTTCEEEECSCCC
T ss_pred hHHhhCCCCCEEEecCCCC
Confidence 2346789999999999864
No 84
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=97.50 E-value=1.9e-07 Score=92.84 Aligned_cols=89 Identities=18% Similarity=0.217 Sum_probs=69.0
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcCCCC---CCcCHHHH
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCK---DIIRGEHF 422 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~---~lI~~e~l 422 (718)
+.+++|+|||+|++|+.+|+.+...|.+|+++++++. .......|....+.+++++.+|+|++++... .++ .+
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~~~~~~~~~aDvVilav~~~~~~~v~---~l 92 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEVLCYSEAASRSDVIVLAVHREHYDFLA---EL 92 (201)
Confidence 6788999999999999999999999999999988765 2222224555557888999999999875432 333 24
Q ss_pred hcCCCCeEEEEcCCCC
Q psy7896 423 LQMRDDAIVCNIGHFD 438 (718)
Q Consensus 423 ~~MK~gAiLIN~GRgd 438 (718)
..++++.++||++.+.
T Consensus 93 ~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 93 ADSLKGRVLIDVSNNQ 108 (201)
Confidence 5577899999999974
No 85
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.18 E-value=3.5e-06 Score=87.30 Aligned_cols=91 Identities=21% Similarity=0.226 Sum_probs=70.8
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHh-hcCceec-CHHHHhccCcEEEEcCCCC------
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQAS-MEGYEVT-TMEEAAKEGGIFVTTTGCK------ 414 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~-~~G~~v~-~Leell~~aDiIi~atgt~------ 414 (718)
+.++.|++|+|||.|.+|+.+++.|...|++|+++++++.+..+.. ..|..+. +++++++++|+|+.+++..
T Consensus 124 ~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~ 203 (275)
T 2hk9_A 124 IPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDP 203 (275)
T ss_dssp CTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTTCC
T ss_pred CCCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCCCC
Confidence 4567899999999999999999999999999999998875543222 2244444 6888899999999986542
Q ss_pred CCcCHHHHhcCCCCeEEEEcCC
Q psy7896 415 DIIRGEHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 415 ~lI~~e~l~~MK~gAiLIN~GR 436 (718)
..++ ++.++++.++++++.
T Consensus 204 ~~i~---~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 204 EIFN---YDLIKKDHVVVDIIY 222 (275)
T ss_dssp CSSC---GGGCCTTSEEEESSS
T ss_pred CCCC---HHHcCCCCEEEEcCC
Confidence 1333 456899999999887
No 86
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=98.18 E-value=2.4e-06 Score=89.23 Aligned_cols=89 Identities=13% Similarity=0.159 Sum_probs=72.4
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEcCCCC----CCcCHHHH
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTTTGCK----DIIRGEHF 422 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~atgt~----~lI~~e~l 422 (718)
.++|+|||+|.+|..+|+.|...|.+|+++|+++.+.......|... .+++++++ +|+|+++..+. .++ .+..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 36899999999999999999999999999999987654444556655 47999999 99999987643 233 4556
Q ss_pred hcCCCCeEEEEcCCCC
Q psy7896 423 LQMRDDAIVCNIGHFD 438 (718)
Q Consensus 423 ~~MK~gAiLIN~GRgd 438 (718)
..++++.++||++...
T Consensus 93 ~~l~~g~ivv~~st~~ 108 (296)
T 3qha_A 93 GHAKPGTVIAIHSTIS 108 (296)
T ss_dssp TTCCTTCEEEECSCCC
T ss_pred HhcCCCCEEEEeCCCC
Confidence 7799999999998864
No 87
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.17 E-value=2e-06 Score=85.74 Aligned_cols=89 Identities=17% Similarity=0.169 Sum_probs=68.3
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcCCCCC---CcCHHHHh
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCKD---IIRGEHFL 423 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~~---lI~~e~l~ 423 (718)
.+++|+|||+|.+|+.+++.+...|.+|+++++++.+.......|....+++++++++|+|++++.... ++. +.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~DvVi~av~~~~~~~v~~---l~ 103 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFREHYSSLCS---LS 103 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEEEHHHHTTSCSEEEECSCGGGSGGGGG---GH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCceecHHHHHhCCCEEEECCChHHHHHHHH---HH
Confidence 457899999999999999999999999999998876543333446666688899999999999876432 221 33
Q ss_pred cCCCCeEEEEcCCCC
Q psy7896 424 QMRDDAIVCNIGHFD 438 (718)
Q Consensus 424 ~MK~gAiLIN~GRgd 438 (718)
.+.++.++++++.+.
T Consensus 104 ~~~~~~~vv~~s~g~ 118 (215)
T 2vns_A 104 DQLAGKILVDVSNPT 118 (215)
T ss_dssp HHHTTCEEEECCCCC
T ss_pred HhcCCCEEEEeCCCc
Confidence 334789999999874
No 88
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=98.17 E-value=2.8e-06 Score=89.93 Aligned_cols=93 Identities=22% Similarity=0.290 Sum_probs=72.3
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCC--EEEEEecCCccHHHHhhcCc--e-ecCHHH-HhccCcEEEEcCCCCCC--c
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGS--RVIVTEIDPINALQASMEGY--E-VTTMEE-AAKEGGIFVTTTGCKDI--I 417 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa--~Viv~d~dp~~al~a~~~G~--~-v~~Lee-ll~~aDiIi~atgt~~l--I 417 (718)
+.-++|+|||+|.||..+|+.++..|. +|+++|+++.....+...|. . ..++++ +++++|+|++++....+ +
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v 110 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREI 110 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGGHHHH
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHHHHHH
Confidence 345899999999999999999999999 99999998865544445565 2 357888 89999999998664322 1
Q ss_pred CHHHHhcCCCCeEEEEcCCCC
Q psy7896 418 RGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 418 ~~e~l~~MK~gAiLIN~GRgd 438 (718)
-.+....+++++++++++...
T Consensus 111 l~~l~~~l~~~~iv~d~~Svk 131 (314)
T 3ggo_A 111 AKKLSYILSEDATVTDQGSVK 131 (314)
T ss_dssp HHHHHHHSCTTCEEEECCSCC
T ss_pred HHHHhhccCCCcEEEECCCCc
Confidence 133445689999999998764
No 89
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=98.15 E-value=3.8e-06 Score=90.76 Aligned_cols=93 Identities=15% Similarity=0.159 Sum_probs=73.3
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccC---cEEEEcCCCCC---Cc
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEG---GIFVTTTGCKD---II 417 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~a---DiIi~atgt~~---lI 417 (718)
.+.+++|||||+|.+|..+|+.|...|.+|+++|+++.+.......|... .+++++++.+ |+|+++..+.. ++
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~vl 98 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDSML 98 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHHHH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHHHH
Confidence 45789999999999999999999999999999999887654444456554 4799999999 99999866542 12
Q ss_pred CHHHHhcCCCCeEEEEcCCCC
Q psy7896 418 RGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 418 ~~e~l~~MK~gAiLIN~GRgd 438 (718)
.+.+..++++.++|+++...
T Consensus 99 -~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCC
T ss_pred -HHHHhhCCCCCEEEeCCCCC
Confidence 34456789999999999875
No 90
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=98.15 E-value=3.1e-06 Score=89.52 Aligned_cols=89 Identities=10% Similarity=0.099 Sum_probs=69.5
Q ss_pred cEEEEEecChhHHHHHHHHHhCC-CEEEEEecCCc-------cHHHHhhcCceec-CHHHHhccCcEEEEcCCCCCCcC-
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFG-SRVIVTEIDPI-------NALQASMEGYEVT-TMEEAAKEGGIFVTTTGCKDIIR- 418 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fG-a~Viv~d~dp~-------~al~a~~~G~~v~-~Leell~~aDiIi~atgt~~lI~- 418 (718)
++|||||+|.+|..+|+.|...| .+|+++|+++. ........|. .. +++++++++|+|+++..+.....
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~~~s~~e~~~~aDvVi~avp~~~~~~~ 103 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-EPLDDVAGIACADVVLSLVVGAATKAV 103 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-EEESSGGGGGGCSEEEECCCGGGHHHH
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-CCCCHHHHHhcCCEEEEecCCHHHHHH
Confidence 68999999999999999999999 99999998872 2222223466 66 88999999999999866533211
Q ss_pred -HHHHhcCCCCeEEEEcCCCC
Q psy7896 419 -GEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 419 -~e~l~~MK~gAiLIN~GRgd 438 (718)
.+....++++.++||++...
T Consensus 104 ~~~i~~~l~~~~ivv~~st~~ 124 (317)
T 4ezb_A 104 AASAAPHLSDEAVFIDLNSVG 124 (317)
T ss_dssp HHHHGGGCCTTCEEEECCSCC
T ss_pred HHHHHhhcCCCCEEEECCCCC
Confidence 34456789999999998753
No 91
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=98.14 E-value=2.7e-06 Score=87.34 Aligned_cols=89 Identities=20% Similarity=0.299 Sum_probs=68.9
Q ss_pred cEEEEEecChhHHHHHHHHHhCCC--EEEEEecCCccHHHHhhcCce---ecCHHHHhc-cCcEEEEcCCCCC---CcCH
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGS--RVIVTEIDPINALQASMEGYE---VTTMEEAAK-EGGIFVTTTGCKD---IIRG 419 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa--~Viv~d~dp~~al~a~~~G~~---v~~Leell~-~aDiIi~atgt~~---lI~~ 419 (718)
++|+|||+|.+|..+|+.++..|. +|+++|+++.+...+...|.. ..+++++++ .+|+|++++.... ++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~- 80 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAK- 80 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHHH-
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHHHHHHHHH-
Confidence 589999999999999999999998 999999887654334345653 346888999 9999999876432 222
Q ss_pred HHHhcCCCCeEEEEcCCCC
Q psy7896 420 EHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 420 e~l~~MK~gAiLIN~GRgd 438 (718)
+....|++++++++++...
T Consensus 81 ~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 81 KLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp HHHHHSCTTCEEEECCSCC
T ss_pred HHHhhCCCCcEEEECCCCc
Confidence 3345689999999998764
No 92
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=98.11 E-value=1.4e-05 Score=87.28 Aligned_cols=106 Identities=16% Similarity=0.214 Sum_probs=85.5
Q ss_pred hcccccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecC----CccH------H-H--HhhcC-c-eecCHHHHhccCc
Q psy7896 342 LDIMLAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEID----PINA------L-Q--ASMEG-Y-EVTTMEEAAKEGG 405 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~d----p~~a------l-~--a~~~G-~-~v~~Leell~~aD 405 (718)
.|..+...+|.|+|.|..|..+|+.+.++|+ +|+++|++ ..+. . + +.... . ...+|+|+++.+|
T Consensus 186 ~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~AD 265 (388)
T 1vl6_A 186 TEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGAD 265 (388)
T ss_dssp HTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCS
T ss_pred hCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCC
Confidence 4668899999999999999999999999999 89999987 3221 1 1 11111 1 2457999999999
Q ss_pred EEEEcCCCCCCcCHHHHhcCCCCeEEEEcCCCCccccHHHHhc
Q psy7896 406 IFVTTTGCKDIIRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDK 448 (718)
Q Consensus 406 iIi~atgt~~lI~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~ 448 (718)
+|+.+++ .++|+++.++.|+++.+++.+++-..|+..+...+
T Consensus 266 VlIG~Sa-p~l~t~emVk~Ma~~pIIfalSNPt~E~~p~~a~~ 307 (388)
T 1vl6_A 266 FFIGVSR-GNILKPEWIKKMSRKPVIFALANPVPEIDPELARE 307 (388)
T ss_dssp EEEECSC-SSCSCHHHHTTSCSSCEEEECCSSSCSSCHHHHHH
T ss_pred EEEEeCC-CCccCHHHHHhcCCCCEEEEcCCCCCCCCHHHHHH
Confidence 9999887 69999999999999999999999777888765444
No 93
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=98.11 E-value=2.3e-06 Score=89.94 Aligned_cols=90 Identities=18% Similarity=0.231 Sum_probs=68.5
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEcCCCC----CCcCHHHHh
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTTTGCK----DIIRGEHFL 423 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~atgt~----~lI~~e~l~ 423 (718)
++||+||+|++|..+|+.|..-|.+|++||+++.+.......|... .++.|+++.+|+|+++..+. .++..+.+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 5799999999999999999999999999999887654444456654 47899999999999985542 345666788
Q ss_pred cCCCCeEEEEcCCCC
Q psy7896 424 QMRDDAIVCNIGHFD 438 (718)
Q Consensus 424 ~MK~gAiLIN~GRgd 438 (718)
.++++.++|+++-.+
T Consensus 86 ~~~~~~iiid~sT~~ 100 (297)
T 4gbj_A 86 KLGKDGVHVSMSTIS 100 (297)
T ss_dssp HHCTTCEEEECSCCC
T ss_pred hcCCCeEEEECCCCC
Confidence 999999999998754
No 94
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=98.08 E-value=4.7e-05 Score=78.92 Aligned_cols=88 Identities=16% Similarity=0.076 Sum_probs=66.0
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhc-----------C---------------ceecCHHHHhc
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASME-----------G---------------YEVTTMEEAAK 402 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~-----------G---------------~~v~~Leell~ 402 (718)
++|+|||.|.+|..+|+.+...|.+|+++|+++.....+... | ....+++++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 689999999999999999999999999999887643222111 1 22457889999
Q ss_pred cCcEEEEcCCCC----CCcCHHHHhcCCCCeEEE-EcCC
Q psy7896 403 EGGIFVTTTGCK----DIIRGEHFLQMRDDAIVC-NIGH 436 (718)
Q Consensus 403 ~aDiIi~atgt~----~lI~~e~l~~MK~gAiLI-N~GR 436 (718)
++|+|+.+.... ..+-.+....++++++++ |++.
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~ 123 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST 123 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 999999986532 223345556789999999 4544
No 95
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=98.08 E-value=5.5e-06 Score=87.34 Aligned_cols=90 Identities=12% Similarity=0.149 Sum_probs=70.4
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEcCCCCC----CcC--HHH
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTTTGCKD----IIR--GEH 421 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~atgt~~----lI~--~e~ 421 (718)
|+||+||+|++|..+|++|..-|.+|++||++|.+.......|... .++.|+++.+|+|+++-.+.. ++. ...
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 5899999999999999999999999999999987655545566654 579999999999999744322 111 113
Q ss_pred HhcCCCCeEEEEcCCCC
Q psy7896 422 FLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 422 l~~MK~gAiLIN~GRgd 438 (718)
++.+++|.++|+++-.+
T Consensus 84 ~~~~~~g~iiId~sT~~ 100 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIA 100 (300)
T ss_dssp TTSCCC-CEEEECSCCC
T ss_pred hhcCCCCCEEEECCCCC
Confidence 56789999999998864
No 96
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=98.07 E-value=2.8e-05 Score=81.25 Aligned_cols=78 Identities=14% Similarity=0.223 Sum_probs=62.6
Q ss_pred CcEEEEEe-cChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcCCCCC---CcCHHHHh
Q psy7896 348 GKVAVVAG-YGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCKD---IIRGEHFL 423 (718)
Q Consensus 348 GktVGIIG-~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~~---lI~~e~l~ 423 (718)
.++|+||| +|.||..+|+.++..|.+|+++++++.. +.+++++.+|+|+++..... ++ .+...
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~------------~~~~~~~~aDvVilavp~~~~~~vl-~~l~~ 87 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA------------VAESILANADVVIVSVPINLTLETI-ERLKP 87 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG------------GHHHHHTTCSEEEECSCGGGHHHHH-HHHGG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc------------CHHHHhcCCCEEEEeCCHHHHHHHH-HHHHh
Confidence 57899999 9999999999999999999999877632 46678899999999866533 22 22334
Q ss_pred cCCCCeEEEEcCCCC
Q psy7896 424 QMRDDAIVCNIGHFD 438 (718)
Q Consensus 424 ~MK~gAiLIN~GRgd 438 (718)
.+++++++++++...
T Consensus 88 ~l~~~~iv~~~~svk 102 (298)
T 2pv7_A 88 YLTENMLLADLTSVK 102 (298)
T ss_dssp GCCTTSEEEECCSCC
T ss_pred hcCCCcEEEECCCCC
Confidence 689999999998754
No 97
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=98.06 E-value=9.4e-06 Score=85.51 Aligned_cols=92 Identities=13% Similarity=0.172 Sum_probs=70.4
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCC--ccHHHHhhcCcee-cCHHHHhccCcEEEEcCCCCCCcC--HH
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDP--INALQASMEGYEV-TTMEEAAKEGGIFVTTTGCKDIIR--GE 420 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp--~~al~a~~~G~~v-~~Leell~~aDiIi~atgt~~lI~--~e 420 (718)
.-++|+|||+|.+|..+|+.|...|. +|+++|+++ .........|... .++.++++++|+|+++..+..... .+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~~~~ 102 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAALEVAQQ 102 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHHHHHh
Confidence 45799999999999999999999999 999999874 3333333456654 478999999999999866543321 34
Q ss_pred HHhcCCCCeEEEEcCCCC
Q psy7896 421 HFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 421 ~l~~MK~gAiLIN~GRgd 438 (718)
....++++.++||++...
T Consensus 103 l~~~l~~~~ivvd~st~~ 120 (312)
T 3qsg_A 103 AGPHLCEGALYADFTSCS 120 (312)
T ss_dssp HGGGCCTTCEEEECCCCC
T ss_pred hHhhcCCCCEEEEcCCCC
Confidence 456789999999998754
No 98
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=98.04 E-value=6.1e-06 Score=85.21 Aligned_cols=90 Identities=14% Similarity=0.206 Sum_probs=70.1
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEcCCCCC----CcC--HHH
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTTTGCKD----IIR--GEH 421 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~atgt~~----lI~--~e~ 421 (718)
++|+|||+|.+|..+++.+...|.+|.++|+++.+.......|... .+++++++.+|+|++++.+.. ++. .+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 4899999999999999999999999999998876544333446654 478899999999999876422 221 123
Q ss_pred HhcCCCCeEEEEcCCCC
Q psy7896 422 FLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 422 l~~MK~gAiLIN~GRgd 438 (718)
...++++.+++|++.+.
T Consensus 86 ~~~l~~~~~vv~~s~~~ 102 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIA 102 (299)
T ss_dssp HHHCCTTCEEEECSCCC
T ss_pred hhcCCCCCEEEECCCCC
Confidence 46789999999998874
No 99
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.03 E-value=7.6e-06 Score=84.39 Aligned_cols=90 Identities=16% Similarity=0.261 Sum_probs=68.0
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEcCCCC----CCcCH--HH
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTTTGCK----DIIRG--EH 421 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~atgt~----~lI~~--e~ 421 (718)
++|+|||+|.+|..+|+.+...|.+|+++|+++.+.......|..+ .+++++++.+|+|++++... .++.. ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 3799999999999999999999999999999886544444456654 47889999999999986432 12211 12
Q ss_pred HhcCCCCeEEEEcCCCC
Q psy7896 422 FLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 422 l~~MK~gAiLIN~GRgd 438 (718)
+..++++.++|+++..+
T Consensus 81 ~~~l~~~~~vv~~s~~~ 97 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTID 97 (296)
T ss_dssp GGTCCTTCEEEECSCCC
T ss_pred HhcCCCCCEEEECCCCC
Confidence 34678999999976643
No 100
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.03 E-value=2.9e-06 Score=86.50 Aligned_cols=96 Identities=16% Similarity=0.142 Sum_probs=70.2
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCCE-EEEEecCCccHHHHhhc-Ccee-cCHHHHhccCcEEEEcCCCCCC--c
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGSR-VIVTEIDPINALQASME-GYEV-TTMEEAAKEGGIFVTTTGCKDI--I 417 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~-Viv~d~dp~~al~a~~~-G~~v-~~Leell~~aDiIi~atgt~~l--I 417 (718)
..++.+++|+|||+|++|+.+|+.+...|.+ |.++|+++.+....... |..+ .+++++++++|+|++++....+ +
T Consensus 5 ~~~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~~~~v 84 (266)
T 3d1l_A 5 KRSIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSAFAEL 84 (266)
T ss_dssp --CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHHHHHH
T ss_pred hcCCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHHHHHH
Confidence 3456678999999999999999999988998 89999887654332222 5543 4788889999999998765422 1
Q ss_pred CHHHHhcCCCCeEEEEcCCCC
Q psy7896 418 RGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 418 ~~e~l~~MK~gAiLIN~GRgd 438 (718)
-.+....++++.++++++.+.
T Consensus 85 ~~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 85 LQGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp HHHHHTTCCTTCEEEECCTTS
T ss_pred HHHHHhhcCCCcEEEECCCCC
Confidence 112234578999999998864
No 101
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.03 E-value=4.7e-06 Score=85.43 Aligned_cols=89 Identities=15% Similarity=0.050 Sum_probs=66.9
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcCCCCCCcC---HHHHhcC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCKDIIR---GEHFLQM 425 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~~lI~---~e~l~~M 425 (718)
++|+|||+|.+|..+|+.+.. |.+|+++++++.+.......|....+++++++.+|+|++++.+...+. .+....+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~l 80 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL 80 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHHHHHHhhC
Confidence 479999999999999999999 999999998886543333335444446788899999999877542111 2233568
Q ss_pred CCCeEEEEcCCCC
Q psy7896 426 RDDAIVCNIGHFD 438 (718)
Q Consensus 426 K~gAiLIN~GRgd 438 (718)
+++.++++++...
T Consensus 81 ~~~~~vv~~s~~~ 93 (289)
T 2cvz_A 81 REGTYWVDATSGE 93 (289)
T ss_dssp CTTEEEEECSCCC
T ss_pred CCCCEEEECCCCC
Confidence 9999999998764
No 102
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=98.01 E-value=1.6e-05 Score=84.06 Aligned_cols=80 Identities=28% Similarity=0.388 Sum_probs=70.7
Q ss_pred hhcccccCcEEEEEecCh-hHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcCCCCCCcCH
Q psy7896 341 YLDIMLAGKVAVVAGYGD-VGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCKDIIRG 419 (718)
Q Consensus 341 ~~g~eL~GktVGIIG~G~-IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~~lI~~ 419 (718)
+.+.++.||++.|||-++ +|+.+|.+|...||.|+++.... .++.+.+++|||++.+.|..++|+.
T Consensus 172 ~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T-------------~dl~~~~~~ADIvV~A~G~p~~i~~ 238 (303)
T 4b4u_A 172 ENNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT-------------QNLPELVKQADIIVGAVGKAELIQK 238 (303)
T ss_dssp HTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SSHHHHHHTCSEEEECSCSTTCBCG
T ss_pred HHCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCC-------------CCHHHHhhcCCeEEeccCCCCcccc
Confidence 457889999999999998 59999999999999999986432 3688999999999999999999998
Q ss_pred HHHhcCCCCeEEEEcCC
Q psy7896 420 EHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 420 e~l~~MK~gAiLIN~GR 436 (718)
+ ..|+|+++||+|-
T Consensus 239 d---~vk~GavVIDVGi 252 (303)
T 4b4u_A 239 D---WIKQGAVVVDAGF 252 (303)
T ss_dssp G---GSCTTCEEEECCC
T ss_pred c---cccCCCEEEEece
Confidence 5 4699999999985
No 103
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=97.98 E-value=1.1e-05 Score=83.50 Aligned_cols=90 Identities=16% Similarity=0.214 Sum_probs=69.6
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEcCCCC----CCcC--HHH
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTTTGCK----DIIR--GEH 421 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~atgt~----~lI~--~e~ 421 (718)
++|+|||+|.+|+.+++.+...|.+|+++|+++.+.......|... .+++++++.+|+|++++... .++. .+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 6899999999999999999999999999998876543333346654 47889999999999987532 2232 133
Q ss_pred HhcCCCCeEEEEcCCCC
Q psy7896 422 FLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 422 l~~MK~gAiLIN~GRgd 438 (718)
...++++.++++++.+.
T Consensus 85 ~~~l~~~~~vv~~~~~~ 101 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVS 101 (301)
T ss_dssp HHHSCTTCEEEECCCCC
T ss_pred hhcCCCCCEEEECCCCC
Confidence 45689999999998864
No 104
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=97.98 E-value=1.3e-05 Score=83.90 Aligned_cols=90 Identities=19% Similarity=0.170 Sum_probs=69.2
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEcCCCCCC----cCH--HH
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTTTGCKDI----IRG--EH 421 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~atgt~~l----I~~--e~ 421 (718)
++|+|||+|.+|+.+|+.+...|.+|+++|+++.+.......|..+ .+.+++++++|+|++++.+... +.. ..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~ 110 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGV 110 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhH
Confidence 6899999999999999999999999999998876544333456554 4788999999999998774221 111 12
Q ss_pred HhcCCCCeEEEEcCCCC
Q psy7896 422 FLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 422 l~~MK~gAiLIN~GRgd 438 (718)
++.++++.++++++...
T Consensus 111 ~~~l~~~~~vv~~s~~~ 127 (316)
T 2uyy_A 111 LQGIRPGKCYVDMSTVD 127 (316)
T ss_dssp GGGCCTTCEEEECSCCC
T ss_pred hhcCCCCCEEEECCCCC
Confidence 35688999999998764
No 105
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=97.95 E-value=1.1e-05 Score=82.62 Aligned_cols=88 Identities=17% Similarity=0.132 Sum_probs=66.9
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce---ecCHHHHhccCcEEEEcCCCCC---CcCHHHH
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE---VTTMEEAAKEGGIFVTTTGCKD---IIRGEHF 422 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~---v~~Leell~~aDiIi~atgt~~---lI~~e~l 422 (718)
++|+|||+|++|..+|+.+...|.+|+++++++.+.......|.. ..+++++ +++|+|++++.... ++ .+..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~~~~~~~-~~l~ 78 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQLILPTL-EKLI 78 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHHHHHHHH-HHHG
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHHHHHHHH-HHHH
Confidence 479999999999999999999999999999887654333344542 4578888 99999999876532 22 2333
Q ss_pred hcCCCCeEEEEcCCCC
Q psy7896 423 LQMRDDAIVCNIGHFD 438 (718)
Q Consensus 423 ~~MK~gAiLIN~GRgd 438 (718)
..+++++++++++...
T Consensus 79 ~~~~~~~~vv~~~~~~ 94 (279)
T 2f1k_A 79 PHLSPTAIVTDVASVK 94 (279)
T ss_dssp GGSCTTCEEEECCSCC
T ss_pred hhCCCCCEEEECCCCc
Confidence 5688999999997654
No 106
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=97.94 E-value=1.3e-05 Score=82.55 Aligned_cols=89 Identities=16% Similarity=0.071 Sum_probs=67.6
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-ecCHHHHhccCcEEEEcCCCCC----CcCH--HH
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-VTTMEEAAKEGGIFVTTTGCKD----IIRG--EH 421 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v~~Leell~~aDiIi~atgt~~----lI~~--e~ 421 (718)
++|+|||+|.+|+.+|+.+...|.+|++++ ++.+.......|.. ..+++++++++|+|++++.... ++.. +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 589999999999999999999999999999 87654433334654 3578899999999999875432 1110 12
Q ss_pred HhcCCCCeEEEEcCCCC
Q psy7896 422 FLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 422 l~~MK~gAiLIN~GRgd 438 (718)
...++++.++++++.+.
T Consensus 83 ~~~l~~~~~vv~~s~~~ 99 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSIS 99 (295)
T ss_dssp TTSCCTTEEEEECSCCC
T ss_pred hhcCCCCCEEEECCCCC
Confidence 24688999999998864
No 107
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=97.93 E-value=7e-06 Score=84.85 Aligned_cols=88 Identities=16% Similarity=0.159 Sum_probs=67.8
Q ss_pred cEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcCCCCC---CcCHHHHhc
Q psy7896 349 KVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCKD---IIRGEHFLQ 424 (718)
Q Consensus 349 ktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~~---lI~~e~l~~ 424 (718)
++|+|||+ |++|..+|+.+...|.+|+++++++.........|....+..++++.+|+|+++..... ++ .+....
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~~~~v~-~~l~~~ 90 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNIIEKVA-EDIVPR 90 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHHHHHHH-HHHGGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchHHHHHH-HHHHHh
Confidence 58999999 99999999999999999999998875543333356555577788999999999876432 22 222345
Q ss_pred CCCCeEEEEcCCC
Q psy7896 425 MRDDAIVCNIGHF 437 (718)
Q Consensus 425 MK~gAiLIN~GRg 437 (718)
++++.++++++.+
T Consensus 91 l~~~~ivv~~s~~ 103 (286)
T 3c24_A 91 VRPGTIVLILDAA 103 (286)
T ss_dssp SCTTCEEEESCSH
T ss_pred CCCCCEEEECCCC
Confidence 7899999998775
No 108
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=97.92 E-value=5.7e-06 Score=88.96 Aligned_cols=89 Identities=12% Similarity=0.188 Sum_probs=69.4
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-ecCHHHHhcc----CcEEEEcCCCC---CCcCH
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-VTTMEEAAKE----GGIFVTTTGCK---DIIRG 419 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v~~Leell~~----aDiIi~atgt~---~lI~~ 419 (718)
-++|+|||+|.||..+|+.++..|.+|+++|+++.....+...|.. ..++++++++ +|+|+++.... .++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~~~~~vl-- 85 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAIDSLL-- 85 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCHHHHHHHH--
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCHHHHHHHH--
Confidence 3689999999999999999999999999999988655455556764 3578888764 69999987642 222
Q ss_pred HHHhcCCCCeEEEEcCCCC
Q psy7896 420 EHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 420 e~l~~MK~gAiLIN~GRgd 438 (718)
+.+..+++++++++++...
T Consensus 86 ~~l~~~~~~~iv~Dv~Svk 104 (341)
T 3ktd_A 86 DAVHTHAPNNGFTDVVSVK 104 (341)
T ss_dssp HHHHHHCTTCCEEECCSCS
T ss_pred HHHHccCCCCEEEEcCCCC
Confidence 3345568999999998764
No 109
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=97.90 E-value=9e-06 Score=83.85 Aligned_cols=90 Identities=16% Similarity=0.153 Sum_probs=67.3
Q ss_pred CcEEEEEecChhHHHHHHHHHhC--CCEEEEEecCCccHHHHhhcCc---eecCHHHHhccCcEEEEcCCCCCC---cCH
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLF--GSRVIVTEIDPINALQASMEGY---EVTTMEEAAKEGGIFVTTTGCKDI---IRG 419 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~f--Ga~Viv~d~dp~~al~a~~~G~---~v~~Leell~~aDiIi~atgt~~l---I~~ 419 (718)
-++|+|||+|.+|..+|+.+... |.+|+++|+++.........|. ...+++++++++|+|+++.....+ + .
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~-~ 84 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKKTIDFI-K 84 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHHHHHHH-H
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHHHHHHH-H
Confidence 36899999999999999999765 7899999988765433333454 245788889999999998765322 2 1
Q ss_pred HHHhc-CCCCeEEEEcCCCC
Q psy7896 420 EHFLQ-MRDDAIVCNIGHFD 438 (718)
Q Consensus 420 e~l~~-MK~gAiLIN~GRgd 438 (718)
+.... ++++.++++++...
T Consensus 85 ~l~~~~l~~~~ivi~~~~~~ 104 (290)
T 3b1f_A 85 ILADLDLKEDVIITDAGSTK 104 (290)
T ss_dssp HHHTSCCCTTCEEECCCSCH
T ss_pred HHHhcCCCCCCEEEECCCCc
Confidence 22345 88999999988753
No 110
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=97.90 E-value=2.2e-05 Score=79.65 Aligned_cols=87 Identities=5% Similarity=0.025 Sum_probs=67.7
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHh-hcCcee-cCHHHHhccCcEEEEcCCCCCCcCHHHHhcCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQAS-MEGYEV-TTMEEAAKEGGIFVTTTGCKDIIRGEHFLQMR 426 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~-~~G~~v-~~Leell~~aDiIi~atgt~~lI~~e~l~~MK 426 (718)
++|+|||+|.+|+.+++.+...|.+|.++|+++.+..... ..|..+ .+++++++++|+|++++... ...+.+..++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~~~--~~~~v~~~l~ 81 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQ--LFETVLKPLH 81 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSCGG--GHHHHHTTSC
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeCcH--hHHHHHHHhc
Confidence 5899999999999999999999999999998876543322 225543 47889999999999987743 2245667788
Q ss_pred CCeEEEEcCCC
Q psy7896 427 DDAIVCNIGHF 437 (718)
Q Consensus 427 ~gAiLIN~GRg 437 (718)
++.++|+...+
T Consensus 82 ~~~~vv~~~~~ 92 (259)
T 2ahr_A 82 FKQPIISMAAG 92 (259)
T ss_dssp CCSCEEECCTT
T ss_pred cCCEEEEeCCC
Confidence 88899998654
No 111
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=97.84 E-value=4.4e-05 Score=80.59 Aligned_cols=89 Identities=17% Similarity=0.150 Sum_probs=68.2
Q ss_pred ccCcEEEEEecChhHHHHHHHHHh-CCC-EEEEEecCCccHHHHhh-cC--ce-ecCHHHHhccCcEEEEcCCC-CCCcC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRL-FGS-RVIVTEIDPINALQASM-EG--YE-VTTMEEAAKEGGIFVTTTGC-KDIIR 418 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~-fGa-~Viv~d~dp~~al~a~~-~G--~~-v~~Leell~~aDiIi~atgt-~~lI~ 418 (718)
...++|+|||+|.+|+.+++.+.. +|. +|.++++++.+...... .+ +. ..+++++++++|+|++++.. ..++.
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~~~v~~ 212 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLATEPILF 212 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCSSCCBC
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCCCcccC
Confidence 367899999999999999998865 487 89999988765433222 13 33 35799999999999998653 34555
Q ss_pred HHHHhcCCCCeEEEEcCCC
Q psy7896 419 GEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 419 ~e~l~~MK~gAiLIN~GRg 437 (718)
. +.+++|.+++++|..
T Consensus 213 ~---~~l~~g~~vi~~g~~ 228 (312)
T 2i99_A 213 G---EWVKPGAHINAVGAS 228 (312)
T ss_dssp G---GGSCTTCEEEECCCC
T ss_pred H---HHcCCCcEEEeCCCC
Confidence 4 578999999999765
No 112
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=97.82 E-value=3.1e-05 Score=78.42 Aligned_cols=89 Identities=22% Similarity=0.238 Sum_probs=64.8
Q ss_pred cEEEEEecChhHHHHHHHHHhCCC----EEEEEecCCccHHHHh-hcCcee-cCHHHHhccCcEEEEcCCCCCC--cCHH
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGS----RVIVTEIDPINALQAS-MEGYEV-TTMEEAAKEGGIFVTTTGCKDI--IRGE 420 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa----~Viv~d~dp~~al~a~-~~G~~v-~~Leell~~aDiIi~atgt~~l--I~~e 420 (718)
++|+|||+|++|..+++.+...|. +|+++|+++.+..... ..|... .+..++++++|+|++++....+ +-.+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~~~~~~v~~~ 82 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKPDLYASIINE 82 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCTTTHHHHC--
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCHHHHHHHHHH
Confidence 689999999999999999999998 9999999886543332 236654 4789999999999998743221 1122
Q ss_pred HHhcCCCCeEEEEcCCC
Q psy7896 421 HFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 421 ~l~~MK~gAiLIN~GRg 437 (718)
....++++.++|.+..+
T Consensus 83 l~~~l~~~~~vvs~~~g 99 (247)
T 3gt0_A 83 IKEIIKNDAIIVTIAAG 99 (247)
T ss_dssp -CCSSCTTCEEEECSCC
T ss_pred HHhhcCCCCEEEEecCC
Confidence 23456788888866544
No 113
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=97.77 E-value=6.3e-05 Score=78.14 Aligned_cols=90 Identities=16% Similarity=0.055 Sum_probs=66.3
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCC---EEEEEecCCccHHHHhh-cCceec-CHHHHhccCcEEEEcCCCCCC--cCHH
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGS---RVIVTEIDPINALQASM-EGYEVT-TMEEAAKEGGIFVTTTGCKDI--IRGE 420 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa---~Viv~d~dp~~al~a~~-~G~~v~-~Leell~~aDiIi~atgt~~l--I~~e 420 (718)
.++|+|||+|++|..+++.+...|. +|+++|+++.+...... .|..+. +..++++++|+|+++.....+ +-.+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p~~~~~vl~~ 82 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKPHQIKMVCEE 82 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCGGGHHHHHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCHHHHHHHHHH
Confidence 4789999999999999999999898 89999998876544333 366654 788999999999998754322 1111
Q ss_pred HHhc-CCCCeEEEEcCCC
Q psy7896 421 HFLQ-MRDDAIVCNIGHF 437 (718)
Q Consensus 421 ~l~~-MK~gAiLIN~GRg 437 (718)
.-.. ++++.++|++.-+
T Consensus 83 l~~~~l~~~~iiiS~~ag 100 (280)
T 3tri_A 83 LKDILSETKILVISLAVG 100 (280)
T ss_dssp HHHHHHTTTCEEEECCTT
T ss_pred HHhhccCCCeEEEEecCC
Confidence 1223 6788788877655
No 114
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=97.74 E-value=4.8e-05 Score=77.18 Aligned_cols=87 Identities=20% Similarity=0.211 Sum_probs=62.8
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEec--CCccHHHHhhcCceecCHHHHhccCcEEEEcCCCCCCcC--HHHHhc
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEI--DPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCKDIIR--GEHFLQ 424 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~--dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~~lI~--~e~l~~ 424 (718)
++|+|||+|++|..+|+.|...|.+|+++++ ++.........|.. .+.+++++++|+|+++..+..... .+....
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~aDvvi~~v~~~~~~~~~~~~~~~ 79 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT-ETSEEDVYSCPVVISAVTPGVALGAARRAGRH 79 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE-ECCHHHHHTSSEEEECSCGGGHHHHHHHHHTT
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc-CCHHHHHhcCCEEEEECCCHHHHHHHHHHHHh
Confidence 4799999999999999999999999999876 33222222234666 678899999999999865532111 233456
Q ss_pred CCCCeEEEEcCCCC
Q psy7896 425 MRDDAIVCNIGHFD 438 (718)
Q Consensus 425 MK~gAiLIN~GRgd 438 (718)
+++ ++++++...
T Consensus 80 ~~~--~vi~~s~~~ 91 (264)
T 1i36_A 80 VRG--IYVDINNIS 91 (264)
T ss_dssp CCS--EEEECSCCC
T ss_pred cCc--EEEEccCCC
Confidence 776 899987653
No 115
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=97.71 E-value=6.3e-05 Score=84.47 Aligned_cols=90 Identities=11% Similarity=0.097 Sum_probs=70.1
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhc---Cce---ecCHHHHhc---cCcEEEEcCCCC----
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASME---GYE---VTTMEEAAK---EGGIFVTTTGCK---- 414 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~---G~~---v~~Leell~---~aDiIi~atgt~---- 414 (718)
-++|||||+|.+|..+|+.+...|.+|+++|+++.+....... |.. ..+++|+++ .+|+|+++....
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 3689999999999999999999999999999998654333222 322 367899887 499999985542
Q ss_pred CCcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 415 DIIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 415 ~lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
.++ .+....|++|.++|++|...
T Consensus 84 ~vl-~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 84 DFI-EKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCC
T ss_pred HHH-HHHHHhcCCCCEEEEcCCCC
Confidence 233 35567899999999999875
No 116
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=97.71 E-value=5.5e-05 Score=84.73 Aligned_cols=94 Identities=13% Similarity=0.049 Sum_probs=70.6
Q ss_pred ccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhc----Ccee-cCHHHHhcc---CcEEEEcCCCC-
Q psy7896 344 IMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASME----GYEV-TTMEEAAKE---GGIFVTTTGCK- 414 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~----G~~v-~~Leell~~---aDiIi~atgt~- 414 (718)
..+..++|||||+|.+|+.+|+.+...|.+|+++++++.+....... |... .+++++++. +|+|+++....
T Consensus 11 ~~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~ 90 (480)
T 2zyd_A 11 HHMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGA 90 (480)
T ss_dssp ----CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSS
T ss_pred cccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHH
Confidence 34667899999999999999999999999999999987654332222 5543 478899887 99999986542
Q ss_pred ---CCcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 415 ---DIIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 415 ---~lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
.++ .+....++++.++||++.+.
T Consensus 91 ~v~~vl-~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 91 GTDAAI-DSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHHHHH-HHHGGGCCTTCEEEECSCCC
T ss_pred HHHHHH-HHHHhhcCCCCEEEECCCCC
Confidence 233 34456789999999999875
No 117
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.70 E-value=7.5e-05 Score=82.60 Aligned_cols=91 Identities=24% Similarity=0.285 Sum_probs=72.8
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEec-C-----CccHHHHhhcCceecCHHHHhccCcEEEEcCCCC---C
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEI-D-----PINALQASMEGYEVTTMEEAAKEGGIFVTTTGCK---D 415 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~-d-----p~~al~a~~~G~~v~~Leell~~aDiIi~atgt~---~ 415 (718)
-|+||+|+|||||.-|.+-|..||.-|.+|++--+ + ......|..+|+.+.+.+|+++.||+|.+.+... .
T Consensus 34 ~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~~~~eA~~~ADvV~~L~PD~~q~~ 113 (491)
T 3ulk_A 34 YLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHSD 113 (491)
T ss_dssp GGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEEEHHHHGGGCSEEEECSCGGGHHH
T ss_pred HHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEecCHHHHHHhCCEEEEeCChhhHHH
Confidence 48999999999999999999999999999998533 1 1223456789999999999999999999865432 2
Q ss_pred CcCHHHHhcCCCCeEEEEcCCC
Q psy7896 416 IIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 416 lI~~e~l~~MK~gAiLIN~GRg 437 (718)
+. ++....||+|+.|+= +||
T Consensus 114 vy-~~I~p~lk~G~~L~f-aHG 133 (491)
T 3ulk_A 114 VV-RTVQPLMKDGAALGY-SHG 133 (491)
T ss_dssp HH-HHHGGGSCTTCEEEE-SSC
T ss_pred HH-HHHHhhCCCCCEEEe-cCc
Confidence 34 456789999999984 554
No 118
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.70 E-value=7.4e-05 Score=70.16 Aligned_cols=74 Identities=15% Similarity=0.111 Sum_probs=52.2
Q ss_pred hhcccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHh-hcCceec-----C---HHHH-hccCcEEEEc
Q psy7896 341 YLDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQAS-MEGYEVT-----T---MEEA-AKEGGIFVTT 410 (718)
Q Consensus 341 ~~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~-~~G~~v~-----~---Leel-l~~aDiIi~a 410 (718)
++...+.+++|+|+|+|.+|+.+++.|+..|.+|+++++++.+...+. ..|..+. + +.++ ++.+|+|+.+
T Consensus 12 ~~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~ 91 (155)
T 2g1u_A 12 HMSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAF 91 (155)
T ss_dssp -----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred hhhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence 345667899999999999999999999999999999999886543332 3344321 1 2233 5678999888
Q ss_pred CCCC
Q psy7896 411 TGCK 414 (718)
Q Consensus 411 tgt~ 414 (718)
+++.
T Consensus 92 ~~~~ 95 (155)
T 2g1u_A 92 TNDD 95 (155)
T ss_dssp SSCH
T ss_pred eCCc
Confidence 7763
No 119
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.69 E-value=8.8e-05 Score=81.14 Aligned_cols=107 Identities=21% Similarity=0.259 Sum_probs=85.0
Q ss_pred hhcccccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCc---------cHHH---Hhh-cC-ceecCHHHHhccCc
Q psy7896 341 YLDIMLAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPI---------NALQ---ASM-EG-YEVTTMEEAAKEGG 405 (718)
Q Consensus 341 ~~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~---------~al~---a~~-~G-~~v~~Leell~~aD 405 (718)
..|..+...+|.|+|.|..|..+|+.+.++|+ +|+++|++.. ...+ +.. .- -...+|+|+++.+|
T Consensus 181 l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~AD 260 (398)
T 2a9f_A 181 LLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGAD 260 (398)
T ss_dssp TTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTC
T ss_pred HhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCC
Confidence 34678899999999999999999999999999 9999997631 1111 110 10 01346999999999
Q ss_pred EEEEcCCCCCCcCHHHHhcCCCCeEEEEcCCCCccccHHHHhc
Q psy7896 406 IFVTTTGCKDIIRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDK 448 (718)
Q Consensus 406 iIi~atgt~~lI~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~ 448 (718)
+|+-++. .++++++.++.|+++++++..+.-..|+..+...+
T Consensus 261 V~IG~Sa-pgl~T~EmVk~Ma~~pIIfalsNPt~E~~pe~a~~ 302 (398)
T 2a9f_A 261 IFIGVSA-PGVLKAEWISKMAARPVIFAMANPIPEIYPDEALE 302 (398)
T ss_dssp SEEECCS-TTCCCHHHHHTSCSSCEEEECCSSSCSSCHHHHHT
T ss_pred EEEecCC-CCCCCHHHHHhhCCCCEEEECCCCCccCCHHHHHH
Confidence 9998876 79999999999999999999999877888765544
No 120
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.64 E-value=7.4e-05 Score=78.13 Aligned_cols=92 Identities=16% Similarity=0.121 Sum_probs=67.6
Q ss_pred ccccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhcCceecC---HHHHhccCcEEEEcCCCC---C-
Q psy7896 344 IMLAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASMEGYEVTT---MEEAAKEGGIFVTTTGCK---D- 415 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~G~~v~~---Leell~~aDiIi~atgt~---~- 415 (718)
..+.||+++|+|.|.+|+.++..|...|+ +|+++++++.++.+. ...+...+ +.++++++|+||.+|+.- +
T Consensus 113 ~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l-a~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~ 191 (277)
T 3don_A 113 EGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNW-SLNINKINLSHAESHLDEFDIIINTTPAGMNGNT 191 (277)
T ss_dssp TTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC-CSCCEEECHHHHHHTGGGCSEEEECCC-------
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH-HHhcccccHhhHHHHhcCCCEEEECccCCCCCCC
Confidence 45789999999999999999999999999 899999988654322 22333333 455678999999886531 1
Q ss_pred --CcCHHHHhcCCCCeEEEEcCCCCc
Q psy7896 416 --IIRGEHFLQMRDDAIVCNIGHFDC 439 (718)
Q Consensus 416 --lI~~e~l~~MK~gAiLIN~GRgd~ 439 (718)
.+. .+.++++.+++++...+.
T Consensus 192 ~~~l~---~~~l~~~~~V~D~vY~P~ 214 (277)
T 3don_A 192 DSVIS---LNRLASHTLVSDIVYNPY 214 (277)
T ss_dssp CCSSC---CTTCCSSCEEEESCCSSS
T ss_pred cCCCC---HHHcCCCCEEEEecCCCC
Confidence 122 456889999999877543
No 121
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=97.63 E-value=3.4e-05 Score=76.63 Aligned_cols=76 Identities=17% Similarity=0.301 Sum_probs=55.1
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcCCCCC---CcCH
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCKD---IIRG 419 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~~---lI~~ 419 (718)
..++.+++|+|||+|++|..+|+.+...|.+|+++++++. .++++|+|+++..... ++.
T Consensus 14 ~~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-----------------~~~~aD~vi~av~~~~~~~v~~- 75 (209)
T 2raf_A 14 NLYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------------ATTLGEIVIMAVPYPALAALAK- 75 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-----------------CSSCCSEEEECSCHHHHHHHHH-
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-----------------HhccCCEEEEcCCcHHHHHHHH-
Confidence 4567899999999999999999999999999999987653 4567999999876422 121
Q ss_pred HHHhcCCCCeEEEEcCCC
Q psy7896 420 EHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 420 e~l~~MK~gAiLIN~GRg 437 (718)
+....++ ++++++++.+
T Consensus 76 ~l~~~~~-~~~vi~~~~g 92 (209)
T 2raf_A 76 QYATQLK-GKIVVDITNP 92 (209)
T ss_dssp HTHHHHT-TSEEEECCCC
T ss_pred HHHHhcC-CCEEEEECCC
Confidence 1223467 8999999886
No 122
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.59 E-value=5.4e-05 Score=72.68 Aligned_cols=92 Identities=20% Similarity=0.172 Sum_probs=61.5
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhC-CCEEEEEecCCccHHHHhhcCceec-----C---HHHH--hccCcEEEEcC
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLF-GSRVIVTEIDPINALQASMEGYEVT-----T---MEEA--AKEGGIFVTTT 411 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~f-Ga~Viv~d~dp~~al~a~~~G~~v~-----~---Leel--l~~aDiIi~at 411 (718)
+.++.+++|+|+|+|.+|+.+|+.|+.. |.+|+++|+++.+.......|..+. + +.++ +..+|+|+.++
T Consensus 34 ~~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~ 113 (183)
T 3c85_A 34 LINPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAM 113 (183)
T ss_dssp CBCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECC
T ss_pred CcCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeC
Confidence 3457789999999999999999999999 9999999999866544444455432 2 3333 56788888877
Q ss_pred CCCCC--cCHHHHhcCCCCeEEEEc
Q psy7896 412 GCKDI--IRGEHFLQMRDDAIVCNI 434 (718)
Q Consensus 412 gt~~l--I~~e~l~~MK~gAiLIN~ 434 (718)
++... .-...+..+.+...++..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 114 PHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp SSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CChHHHHHHHHHHHHHCCCCEEEEE
Confidence 64211 111234455544444443
No 123
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=97.59 E-value=0.0001 Score=77.82 Aligned_cols=92 Identities=14% Similarity=0.112 Sum_probs=66.6
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCC----CEEEEEecCCc--cHHHHhhcCceec-CHHHHhccCcEEEEcCCCCCCcC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFG----SRVIVTEIDPI--NALQASMEGYEVT-TMEEAAKEGGIFVTTTGCKDIIR 418 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fG----a~Viv~d~dp~--~al~a~~~G~~v~-~Leell~~aDiIi~atgt~~lI~ 418 (718)
+..++|+|||+|++|..+|..|...| .+|+++++++. +.......|..+. +..++++.+|+|+++.....+-.
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~~~~~~~ 99 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKPHIIPF 99 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSCGGGHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeCHHHHHH
Confidence 34468999999999999999999888 68999998874 3222234476654 68899999999999876432211
Q ss_pred --HHHHhcCCCCeEEEEcCCC
Q psy7896 419 --GEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 419 --~e~l~~MK~gAiLIN~GRg 437 (718)
.+....++++.++|++.-+
T Consensus 100 vl~~l~~~l~~~~ivvs~s~g 120 (322)
T 2izz_A 100 ILDEIGADIEDRHIVVSCAAG 120 (322)
T ss_dssp HHHHHGGGCCTTCEEEECCTT
T ss_pred HHHHHHhhcCCCCEEEEeCCC
Confidence 1223457889999998654
No 124
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=97.59 E-value=4.6e-05 Score=80.32 Aligned_cols=88 Identities=20% Similarity=0.240 Sum_probs=63.4
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhc-------Ccee-cCHHHHhccCcEEEEcCCCCCCcC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASME-------GYEV-TTMEEAAKEGGIFVTTTGCKDIIR 418 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~-------G~~v-~~Leell~~aDiIi~atgt~~lI~ 418 (718)
+-|+|+|||.|.+|..+|+.+. .|.+|+++|+++.....+... +..+ .++++ +++||+|+.+....--+.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~vk 88 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNTK 88 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHHH
Confidence 5699999999999999999999 999999999988654333222 3433 35666 889999999855432222
Q ss_pred HH---HHhcCCCCeEEE-EcCCC
Q psy7896 419 GE---HFLQMRDDAIVC-NIGHF 437 (718)
Q Consensus 419 ~e---~l~~MK~gAiLI-N~GRg 437 (718)
.. .++.+ ++++++ |++..
T Consensus 89 ~~l~~~l~~~-~~~IlasntSti 110 (293)
T 1zej_A 89 VEVLREVERL-TNAPLCSNTSVI 110 (293)
T ss_dssp HHHHHHHHTT-CCSCEEECCSSS
T ss_pred HHHHHHHhcC-CCCEEEEECCCc
Confidence 22 25667 898885 88764
No 125
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.58 E-value=0.00018 Score=74.23 Aligned_cols=94 Identities=14% Similarity=0.137 Sum_probs=66.7
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHh-hc----CceecCHHHHh-ccCcEEEEcCCCCCC
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQAS-ME----GYEVTTMEEAA-KEGGIFVTTTGCKDI 416 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~-~~----G~~v~~Leell-~~aDiIi~atgt~~l 416 (718)
+..+.||+++|+|.|.+|+.+++.|...|++|+++++++.+..+.. .. ...+.+++++. ..+|++|.+++....
T Consensus 114 ~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~ 193 (271)
T 1nyt_A 114 SFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGIS 193 (271)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGG
T ss_pred CcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCC
Confidence 4567899999999999999999999999999999998875432211 11 12234444444 589999998764322
Q ss_pred -----cCHHHHhcCCCCeEEEEcCCCCc
Q psy7896 417 -----IRGEHFLQMRDDAIVCNIGHFDC 439 (718)
Q Consensus 417 -----I~~e~l~~MK~gAiLIN~GRgd~ 439 (718)
+.. +.++++.+++++.....
T Consensus 194 ~~~~~i~~---~~l~~~~~v~D~~y~p~ 218 (271)
T 1nyt_A 194 GDIPAIPS---SLIHPGIYCYDMFYQKG 218 (271)
T ss_dssp TCCCCCCG---GGCCTTCEEEESCCCSS
T ss_pred CCCCCCCH---HHcCCCCEEEEeccCCc
Confidence 332 33678888998877543
No 126
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.58 E-value=0.00016 Score=75.87 Aligned_cols=91 Identities=23% Similarity=0.165 Sum_probs=66.1
Q ss_pred ccccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHh-hcCc---eec---CHHHHhccCcEEEEcCCCCC
Q psy7896 344 IMLAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQAS-MEGY---EVT---TMEEAAKEGGIFVTTTGCKD 415 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~-~~G~---~v~---~Leell~~aDiIi~atgt~~ 415 (718)
..+.|++++|+|.|.+|+.++..|...|+ +|+++++++.++.+.. ..+. .+. ++.+.++++|+||.+++...
T Consensus 137 ~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~ 216 (297)
T 2egg_A 137 ITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGM 216 (297)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTC
T ss_pred CCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCC
Confidence 46789999999999999999999999998 9999999876543221 1122 333 35566789999999876421
Q ss_pred -------CcCHHHHhcCCCCeEEEEcCCC
Q psy7896 416 -------IIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 416 -------lI~~e~l~~MK~gAiLIN~GRg 437 (718)
.++ .+.++++.+++++...
T Consensus 217 ~~~~~~~~i~---~~~l~~~~~v~D~~y~ 242 (297)
T 2egg_A 217 HPRVEVQPLS---LERLRPGVIVSDIIYN 242 (297)
T ss_dssp SSCCSCCSSC---CTTCCTTCEEEECCCS
T ss_pred CCCCCCCCCC---HHHcCCCCEEEEcCCC
Confidence 122 2456788888887764
No 127
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=97.56 E-value=8e-05 Score=81.53 Aligned_cols=80 Identities=16% Similarity=0.260 Sum_probs=65.4
Q ss_pred cCcEEEEEec-ChhHHHHHHHHHhCCC---EEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcC----CCCCCcC
Q psy7896 347 AGKVAVVAGY-GDVGKGCAQSLRLFGS---RVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTT----GCKDIIR 418 (718)
Q Consensus 347 ~GktVGIIG~-G~IG~~vA~~l~~fGa---~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~at----gt~~lI~ 418 (718)
..-+|.|||. |++|+..++.|+++|+ +|.++|.++.. .|-.+ +.++++|+||.+. ..+.+|+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~------~g~~~----~~i~~aDivIn~vlig~~aP~Lvt 282 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETS------RGGPF----DEIPQADIFINCIYLSKPIAPFTN 282 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHT------TCSCC----THHHHSSEEEECCCCCSSCCCSCC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccc------cCCch----hhHhhCCEEEECcCcCCCCCcccC
Confidence 4678999999 9999999999999998 89999876521 13222 3466999999873 3567999
Q ss_pred HHHHhcC-CCCeEEEEcCC
Q psy7896 419 GEHFLQM-RDDAIVCNIGH 436 (718)
Q Consensus 419 ~e~l~~M-K~gAiLIN~GR 436 (718)
++.++.| |+|+++|+++-
T Consensus 283 ~e~v~~m~k~gsVIVDVA~ 301 (394)
T 2qrj_A 283 MEKLNNPNRRLRTVVDVSA 301 (394)
T ss_dssp HHHHCCTTCCCCEEEETTC
T ss_pred HHHHhcCcCCCeEEEEEec
Confidence 9999999 99999999964
No 128
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=97.56 E-value=0.0001 Score=78.49 Aligned_cols=98 Identities=20% Similarity=0.147 Sum_probs=68.6
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHh-----------hcC--------------c-eecCHHHHh
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQAS-----------MEG--------------Y-EVTTMEEAA 401 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~-----------~~G--------------~-~v~~Leell 401 (718)
-++|+|||.|.+|..+|..+...|.+|+++|++|.....+. ..| . ...++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 37899999999999999999999999999999886432221 122 1 235789999
Q ss_pred ccCcEEEEcCCCC-C---CcCHHHHhcCCCCeEEEEcCCCCccccHHHHhc
Q psy7896 402 KEGGIFVTTTGCK-D---IIRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDK 448 (718)
Q Consensus 402 ~~aDiIi~atgt~-~---lI~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~ 448 (718)
++||+|+.+.... . .+-.+..+.++++++|+..+.+ +....+.+
T Consensus 86 ~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~---i~~~~la~ 133 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC---LLPSKLFT 133 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS---CCHHHHHT
T ss_pred hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC---hHHHHHHH
Confidence 9999999986542 1 1223444578999999744433 34445544
No 129
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=97.56 E-value=0.00014 Score=76.49 Aligned_cols=86 Identities=17% Similarity=0.191 Sum_probs=63.7
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhc-Cc---------------eecCHHHHhccCcEEEEcCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASME-GY---------------EVTTMEEAAKEGGIFVTTTG 412 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~-G~---------------~v~~Leell~~aDiIi~atg 412 (718)
++|+|||.|.+|..+|..|...|.+|+++++++......... +. ...+++++++.+|+|++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 689999999999999999999999999999887543222222 21 23478888999999999876
Q ss_pred CCCC--cCHHHHhcCCCCeEEEEc
Q psy7896 413 CKDI--IRGEHFLQMRDDAIVCNI 434 (718)
Q Consensus 413 t~~l--I~~e~l~~MK~gAiLIN~ 434 (718)
+... +-.+....+++++++++.
T Consensus 85 ~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 85 AIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEEES
T ss_pred chHHHHHHHHHHHhCCCCCEEEEc
Confidence 5432 112223458899988888
No 130
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=97.53 E-value=6.3e-05 Score=76.13 Aligned_cols=86 Identities=16% Similarity=0.196 Sum_probs=62.7
Q ss_pred cEEEEEecChhHHHHHHHHHhCC-CEEEEEecCCccHHHHhh-cCcee-cCHHHHhccCcEEEEcCCCCCCcCHHHHhcC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFG-SRVIVTEIDPINALQASM-EGYEV-TTMEEAAKEGGIFVTTTGCKDIIRGEHFLQM 425 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fG-a~Viv~d~dp~~al~a~~-~G~~v-~~Leell~~aDiIi~atgt~~lI~~e~l~~M 425 (718)
++|+|||+|++|..+|+.+...| .+|.++++++.+...... .|..+ .+.++++ .+|+|++++....+ .+.+..+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~~~~~--~~v~~~l 77 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVKPQDM--EAACKNI 77 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSCHHHH--HHHHTTC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeCchhH--HHHHHHh
Confidence 47999999999999999999889 999999988765433322 26554 3567778 99999998763221 3444445
Q ss_pred CC-CeEEEEcCCC
Q psy7896 426 RD-DAIVCNIGHF 437 (718)
Q Consensus 426 K~-gAiLIN~GRg 437 (718)
++ +.+++++..+
T Consensus 78 ~~~~~ivv~~~~g 90 (263)
T 1yqg_A 78 RTNGALVLSVAAG 90 (263)
T ss_dssp CCTTCEEEECCTT
T ss_pred ccCCCEEEEecCC
Confidence 32 8899998554
No 131
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=97.53 E-value=0.00014 Score=81.89 Aligned_cols=90 Identities=10% Similarity=0.022 Sum_probs=70.3
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhh-----cCcee-cCHHHHhcc---CcEEEEcCCCC----
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASM-----EGYEV-TTMEEAAKE---GGIFVTTTGCK---- 414 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~-----~G~~v-~~Leell~~---aDiIi~atgt~---- 414 (718)
..+|||||+|.+|..+|+.+...|.+|+++++++.+...... .|... .+++++++. +|+|+++..+.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 468999999999999999999999999999998876443333 35543 478898877 99999986552
Q ss_pred CCcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 415 DIIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 415 ~lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
.++ .+....+++|.++|+++.+.
T Consensus 90 ~vl-~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 90 ALI-NQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCC
T ss_pred HHH-HHHHHhCCCCCEEEECCCCC
Confidence 233 34456789999999998874
No 132
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.53 E-value=0.00021 Score=73.46 Aligned_cols=38 Identities=21% Similarity=0.233 Sum_probs=34.3
Q ss_pred ccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 344 IMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
..+.+|+|.|||.|.||..+|..++.+|.+|+++++.+
T Consensus 141 ~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 141 AFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD 178 (312)
T ss_dssp GGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc
Confidence 34678999999999999999999999999999997654
No 133
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=97.48 E-value=0.00029 Score=78.40 Aligned_cols=89 Identities=16% Similarity=0.132 Sum_probs=65.1
Q ss_pred cEEEEEecChhHHHHHHHHHhC--CCEEEEEecCCccHHHH---------------hh----cCcee-cCHHHHhccCcE
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLF--GSRVIVTEIDPINALQA---------------SM----EGYEV-TTMEEAAKEGGI 406 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~f--Ga~Viv~d~dp~~al~a---------------~~----~G~~v-~~Leell~~aDi 406 (718)
++|+|||+|.+|..+|..|... |.+|+++|+++.+.... .. .+..+ .+++++++++|+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 5899999999999999999877 89999999887543221 11 23433 467889999999
Q ss_pred EEEcCCCCCCcC-----------------HHHHhcCCCCeEEEEcCCC
Q psy7896 407 FVTTTGCKDIIR-----------------GEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 407 Ii~atgt~~lI~-----------------~e~l~~MK~gAiLIN~GRg 437 (718)
|+++.++..-.+ .+....|+++.++||.+..
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv 133 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTV 133 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcC
Confidence 999865432111 1233568999999998764
No 134
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.48 E-value=0.00052 Score=72.81 Aligned_cols=100 Identities=22% Similarity=0.263 Sum_probs=73.1
Q ss_pred cCcEEEEEecChhHHHHHHHHHh-CCC-EEEEEecCCccHHHHh---hcCc--eecCHHHHhccCcEEEEcCCCC-CCcC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRL-FGS-RVIVTEIDPINALQAS---MEGY--EVTTMEEAAKEGGIFVTTTGCK-DIIR 418 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~-fGa-~Viv~d~dp~~al~a~---~~G~--~v~~Leell~~aDiIi~atgt~-~lI~ 418 (718)
..++++|||.|.+|+..++.+.. ++. +|.+++++....+... ..|. ...+++++++++|+|+++|... .++.
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~a~~la~~l~~~~g~~~~~~~~~eav~~aDIVi~aT~s~~pvl~ 199 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPYASPEILERIGRRCGVPARMAAPADIAAQADIVVTATRSTTPLFA 199 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTTCCHHHHHHHHHHHTSCEEECCHHHHHHHCSEEEECCCCSSCSSC
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCcHHHHHHHHHHHhcCCeEEEeCHHHHHhhCCEEEEccCCCCcccC
Confidence 47899999999999999998875 444 7999998822222111 1244 2348999999999999987643 4555
Q ss_pred HHHHhcCCCCeEEEEcCCC---CccccHHHHhcc
Q psy7896 419 GEHFLQMRDDAIVCNIGHF---DCEIQVSWLDKN 449 (718)
Q Consensus 419 ~e~l~~MK~gAiLIN~GRg---d~Eid~~aL~~~ 449 (718)
. +.+|+|+.++++|.. ..|+|.+.+...
T Consensus 200 ~---~~l~~G~~V~~vGs~~p~~~El~~~~~~~a 230 (313)
T 3hdj_A 200 G---QALRAGAFVGAIGSSLPHTRELDDEALRRA 230 (313)
T ss_dssp G---GGCCTTCEEEECCCSSTTCCCCCHHHHHHC
T ss_pred H---HHcCCCcEEEECCCCCCchhhcCHHHHhcC
Confidence 3 468999999999874 257887766543
No 135
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=97.47 E-value=0.00018 Score=80.39 Aligned_cols=89 Identities=10% Similarity=0.032 Sum_probs=68.4
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhh-----cCce-ecCHHHHhc---cCcEEEEcCCCC-C---
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASM-----EGYE-VTTMEEAAK---EGGIFVTTTGCK-D--- 415 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~-----~G~~-v~~Leell~---~aDiIi~atgt~-~--- 415 (718)
++|||||+|.+|+.+|..+...|.+|.++++++.+...... .|.. ..+++++++ .+|+|+++..+. .
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 57999999999999999999999999999998865433332 3554 357888874 899999986653 2
Q ss_pred CcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 416 IIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 416 lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
++ .+....++++.+||+++.+.
T Consensus 83 vl-~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 83 FI-EKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp HH-HHHHHHCCTTCEEEECSCCC
T ss_pred HH-HHHHhhcCCCCEEEECCCCC
Confidence 23 23445789999999998764
No 136
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.47 E-value=0.0003 Score=78.02 Aligned_cols=115 Identities=27% Similarity=0.267 Sum_probs=74.1
Q ss_pred cCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhh--hhhhhhhhhHHH---HHHHHHHhccccccc-------
Q psy7896 267 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQ--ASMEGYELDEEV---AALHLEHLGVKLTKL------- 334 (718)
Q Consensus 267 ~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~--AvaeGf~L~r~i---~~~~l~~lgv~~~~~------- 334 (718)
..+++|+|||.|+.|+.+|..|++.|+.|+++|..+..... -....|.+.+++ ....+...++++...
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~~v 199 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGRDA 199 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBTTTB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEeccEE
Confidence 35789999999999999999999999999999986542110 001123333322 122223333332100
Q ss_pred ----------------chhhh-----------------hh--------hc----------ccccCcEEEEEecChhHHHH
Q psy7896 335 ----------------TEDQA-----------------KY--------LD----------IMLAGKVAVVAGYGDVGKGC 363 (718)
Q Consensus 335 ----------------~~~~~-----------------~~--------~g----------~eL~GktVGIIG~G~IG~~v 363 (718)
..+.. .+ .+ ....||+|.|||.|++|..+
T Consensus 200 ~~~~~~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~ 279 (456)
T 2vdc_G 200 SLPELRRKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDC 279 (456)
T ss_dssp CHHHHHSSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHH
T ss_pred EhhHhHhhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHH
Confidence 00000 00 01 11468999999999999999
Q ss_pred HHHHHhCCC-EEEEEecCC
Q psy7896 364 AQSLRLFGS-RVIVTEIDP 381 (718)
Q Consensus 364 A~~l~~fGa-~Viv~d~dp 381 (718)
|..+..+|+ +|+++.+.+
T Consensus 280 A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 280 VRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp HHHHHHTTCSEEEEECSSC
T ss_pred HHHHHHcCCCEEEEEEeCC
Confidence 999999999 599987654
No 137
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=97.46 E-value=0.00016 Score=80.67 Aligned_cols=89 Identities=16% Similarity=0.079 Sum_probs=68.1
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhc----Ccee-cCHHHHhcc---CcEEEEcCCCC-C---C
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASME----GYEV-TTMEEAAKE---GGIFVTTTGCK-D---I 416 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~----G~~v-~~Leell~~---aDiIi~atgt~-~---l 416 (718)
++|||||+|.+|+.+|+.+...|.+|.++++++.+....... |... .+++++++. +|+|+++..+. . +
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 579999999999999999999999999999887654332222 5543 578898876 99999986653 2 2
Q ss_pred cCHHHHhcCCCCeEEEEcCCCC
Q psy7896 417 IRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 417 I~~e~l~~MK~gAiLIN~GRgd 438 (718)
+ .+....+++|.++|+++.+.
T Consensus 86 l-~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCCC
T ss_pred H-HHHHhhCCCCCEEEECCCCC
Confidence 3 23345789999999998874
No 138
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=97.46 E-value=0.00018 Score=75.22 Aligned_cols=88 Identities=14% Similarity=0.140 Sum_probs=63.2
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEec--CCccHHHHhhcCc-----------eec---CHHHHhccCcEEEEcCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEI--DPINALQASMEGY-----------EVT---TMEEAAKEGGIFVTTTG 412 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~--dp~~al~a~~~G~-----------~v~---~Leell~~aDiIi~atg 412 (718)
++|+|||.|.+|..+|..|...|.+|+++++ ++.........|. .+. ++.++++.+|+|+++..
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 4799999999999999999988999999988 6654332223332 232 57788899999999876
Q ss_pred CCCCcC--HHHHhcCCCCeEEEEcCCC
Q psy7896 413 CKDIIR--GEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~~lI~--~e~l~~MK~gAiLIN~GRg 437 (718)
...+-. .+... ++++.+++++..+
T Consensus 81 ~~~~~~v~~~i~~-l~~~~~vv~~~ng 106 (335)
T 1txg_A 81 TDGVLPVMSRILP-YLKDQYIVLISKG 106 (335)
T ss_dssp GGGHHHHHHHHTT-TCCSCEEEECCCS
T ss_pred hHHHHHHHHHHhc-CCCCCEEEEEcCc
Confidence 643211 12224 7789999988654
No 139
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.46 E-value=0.00014 Score=65.73 Aligned_cols=83 Identities=13% Similarity=0.159 Sum_probs=54.4
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-----cCH---HHH-hccCcEEEEcCCCC--
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-----TTM---EEA-AKEGGIFVTTTGCK-- 414 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-----~~L---eel-l~~aDiIi~atgt~-- 414 (718)
+.+++|+|+|+|.+|+.+++.|...|.+|+++|+++.+.......|..+ .+. .++ ++.+|+++.+++..
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 5678999999999999999999999999999998875432222234322 122 233 56789998887753
Q ss_pred -CCcCHHHHhcCCCC
Q psy7896 415 -DIIRGEHFLQMRDD 428 (718)
Q Consensus 415 -~lI~~e~l~~MK~g 428 (718)
+..-......+.+.
T Consensus 84 ~~~~~~~~~~~~~~~ 98 (144)
T 2hmt_A 84 ASTLTTLLLKELDIP 98 (144)
T ss_dssp HHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHcCCC
Confidence 12222334455555
No 140
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=97.45 E-value=0.00026 Score=78.62 Aligned_cols=89 Identities=20% Similarity=0.197 Sum_probs=66.6
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhh-------------------cC-ce-ecCHHHHhccCcEE
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASM-------------------EG-YE-VTTMEEAAKEGGIF 407 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~-------------------~G-~~-v~~Leell~~aDiI 407 (718)
++|+|||+|.+|..+|..+...|.+|+++|+++.+...... .+ .. ..+++++++++|+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 58999999999999999999999999999998764322111 12 22 34788999999999
Q ss_pred EEcCCCC----------CCc--CHHHHhcCCCCeEEEEcCCC
Q psy7896 408 VTTTGCK----------DII--RGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 408 i~atgt~----------~lI--~~e~l~~MK~gAiLIN~GRg 437 (718)
+++.++. .+. -.+....++++.++|+.+-.
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv 124 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTV 124 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCC
T ss_pred EEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeC
Confidence 9987664 121 12334568999999998853
No 141
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.45 E-value=0.0002 Score=66.17 Aligned_cols=102 Identities=16% Similarity=0.139 Sum_probs=64.7
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec-----C---HHHH-hccCcEEEEcCCCCC--C
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT-----T---MEEA-AKEGGIFVTTTGCKD--I 416 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~-----~---Leel-l~~aDiIi~atgt~~--l 416 (718)
.++|.|+|+|++|+.+|+.|+..|.+|+++|.+|.+.......|+.+. + +.++ +.++|+++.++++.. .
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~ 86 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG 86 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHH
Confidence 357999999999999999999999999999999876544444566432 1 2222 467899888876531 1
Q ss_pred cCHHHHhcCCCCeEEEEcCCCCccccHHHHhcccc
Q psy7896 417 IRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDKNAV 451 (718)
Q Consensus 417 I~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l 451 (718)
.-...+..+.++..++--.+. .-..+.|.+.+.
T Consensus 87 ~~~~~a~~~~~~~~iiar~~~--~~~~~~l~~~G~ 119 (140)
T 3fwz_A 87 EIVASARAKNPDIEIIARAHY--DDEVAYITERGA 119 (140)
T ss_dssp HHHHHHHHHCSSSEEEEEESS--HHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCCeEEEEECC--HHHHHHHHHCCC
Confidence 112234445555555543332 223344554443
No 142
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=97.45 E-value=0.00016 Score=80.09 Aligned_cols=95 Identities=11% Similarity=0.067 Sum_probs=66.1
Q ss_pred hhcccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhh------------------cCcee-cCHHHHh
Q psy7896 341 YLDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASM------------------EGYEV-TTMEEAA 401 (718)
Q Consensus 341 ~~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~------------------~G~~v-~~Leell 401 (718)
.++++..-++|+|||.|.+|..+|..+.. |.+|+++|+++.+...... .+..+ .++++++
T Consensus 29 ~~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~ 107 (432)
T 3pid_A 29 QMGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAY 107 (432)
T ss_dssp ------CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHH
T ss_pred ccccccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHH
Confidence 34566677899999999999999999987 9999999998864322111 12333 4688999
Q ss_pred ccCcEEEEcCCCCC-----CcC--------HHHHhcCCCCeEEEEcCCC
Q psy7896 402 KEGGIFVTTTGCKD-----IIR--------GEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 402 ~~aDiIi~atgt~~-----lI~--------~e~l~~MK~gAiLIN~GRg 437 (718)
+++|+|++++++.- ..+ ..... |++++++|+.+-.
T Consensus 108 ~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv 155 (432)
T 3pid_A 108 RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTI 155 (432)
T ss_dssp TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCC
T ss_pred hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCC
Confidence 99999999876531 111 22334 8999999998764
No 143
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=97.45 E-value=0.0002 Score=74.52 Aligned_cols=88 Identities=16% Similarity=0.086 Sum_probs=61.5
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHH-----------hhcC------------------ce-ecCHH
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA-----------SMEG------------------YE-VTTME 398 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a-----------~~~G------------------~~-v~~Le 398 (718)
++|+|||.|.+|..+|..+...|.+|+++|+++.....+ ...| .. ..+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 689999999999999999999999999999887542211 0112 22 34678
Q ss_pred HHhccCcEEEEcCCCCC----CcCHHHHhcCCCCeEEE-EcCC
Q psy7896 399 EAAKEGGIFVTTTGCKD----IIRGEHFLQMRDDAIVC-NIGH 436 (718)
Q Consensus 399 ell~~aDiIi~atgt~~----lI~~e~l~~MK~gAiLI-N~GR 436 (718)
+.++++|+|+.+....- .+-.+....++++++++ |++.
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~ 138 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSS 138 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSS
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCC
Confidence 88999999999865421 11122224578888887 4443
No 144
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=97.45 E-value=0.00011 Score=71.89 Aligned_cols=86 Identities=23% Similarity=0.189 Sum_probs=62.3
Q ss_pred cEEEEEe-cChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhc-C-------ceecCHHHHhccCcEEEEcCCCCCCcCH
Q psy7896 349 KVAVVAG-YGDVGKGCAQSLRLFGSRVIVTEIDPINALQASME-G-------YEVTTMEEAAKEGGIFVTTTGCKDIIRG 419 (718)
Q Consensus 349 ktVGIIG-~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~-G-------~~v~~Leell~~aDiIi~atgt~~lI~~ 419 (718)
++|+||| .|.+|+.+++.+...|.+|+++++++.+....... + ....+++++++++|+|+.++....+ .
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~~~~--~ 78 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHA--I 78 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHH--H
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCChhhH--H
Confidence 3799999 99999999999999999999999887543221111 1 3345788899999999998764321 1
Q ss_pred HHH----hcCCCCeEEEEcCCC
Q psy7896 420 EHF----LQMRDDAIVCNIGHF 437 (718)
Q Consensus 420 e~l----~~MK~gAiLIN~GRg 437 (718)
+.+ ..++ +.++++++.+
T Consensus 79 ~~~~~l~~~~~-~~~vi~~~~g 99 (212)
T 1jay_A 79 DTARDLKNILR-EKIVVSPLVP 99 (212)
T ss_dssp HHHHHTHHHHT-TSEEEECCCC
T ss_pred HHHHHHHHHcC-CCEEEEcCCC
Confidence 222 2344 8899999875
No 145
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=97.43 E-value=0.00018 Score=72.66 Aligned_cols=82 Identities=15% Similarity=0.150 Sum_probs=60.1
Q ss_pred CcEEEEEecChhHHHHHHHHHhCC----CEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEEcCCCCCCcCHHHH
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFG----SRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVTTTGCKDIIRGEHF 422 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fG----a~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~atgt~~lI~~e~l 422 (718)
.++|+|||+|++|..+|+.+...| .+|.++|+++.+ .|..+ .+..++++.+|+|+++.....+ .+.+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g~~~~~~~~~~~~~~D~vi~~v~~~~~--~~v~ 75 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------TTLNYMSSNEELARHCDIIVCAVKPDIA--GSVL 75 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------SSSEECSCHHHHHHHCSEEEECSCTTTH--HHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------CceEEeCCHHHHHhcCCEEEEEeCHHHH--HHHH
Confidence 468999999999999999998888 689999988754 35554 3688999999999998765322 2222
Q ss_pred ----hcCCCCeEEEEcCCC
Q psy7896 423 ----LQMRDDAIVCNIGHF 437 (718)
Q Consensus 423 ----~~MK~gAiLIN~GRg 437 (718)
..++++.++.+++..
T Consensus 76 ~~l~~~l~~~~vv~~~~gi 94 (262)
T 2rcy_A 76 NNIKPYLSSKLLISICGGL 94 (262)
T ss_dssp HHSGGGCTTCEEEECCSSC
T ss_pred HHHHHhcCCCEEEEECCCC
Confidence 334555566655543
No 146
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.42 E-value=0.00021 Score=74.75 Aligned_cols=93 Identities=14% Similarity=0.187 Sum_probs=67.2
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhh--c---CceecCHHHHhccCcEEEEcCCCC--
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASM--E---GYEVTTMEEAAKEGGIFVTTTGCK-- 414 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~--~---G~~v~~Leell~~aDiIi~atgt~-- 414 (718)
+.++.||++.|+|.|.+|+.++..|...|+ +|+++++++.++.+... . .....+++++.+++|+||.+|+..
T Consensus 121 ~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~ 200 (281)
T 3o8q_A 121 QVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLD 200 (281)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC-
T ss_pred CCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCC
Confidence 456789999999999999999999999997 99999998865432111 1 234556777768899999987542
Q ss_pred ---CCcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 415 ---DIIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 415 ---~lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
-.+. .+.++++.+++++...+
T Consensus 201 ~~~~~l~---~~~l~~~~~V~DlvY~P 224 (281)
T 3o8q_A 201 GELPAID---PVIFSSRSVCYDMMYGK 224 (281)
T ss_dssp ---CSCC---GGGEEEEEEEEESCCCS
T ss_pred CCCCCCC---HHHhCcCCEEEEecCCC
Confidence 1233 23467788888876643
No 147
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.40 E-value=0.00031 Score=61.38 Aligned_cols=66 Identities=17% Similarity=0.112 Sum_probs=48.6
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCC-CEEEEEecCCccHHHHhhcCcee--------cCHHHHhccCcEEEEcCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFG-SRVIVTEIDPINALQASMEGYEV--------TTMEEAAKEGGIFVTTTG 412 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fG-a~Viv~d~dp~~al~a~~~G~~v--------~~Leell~~aDiIi~atg 412 (718)
.+++|+|+|.|.||+.+++.|...| .+|+++++++.+.......+... .++.++++.+|+|+.+++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAP 78 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSC
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCC
Confidence 4689999999999999999999999 89999998876543332233322 124456677888877764
No 148
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.39 E-value=0.0002 Score=74.03 Aligned_cols=70 Identities=10% Similarity=0.158 Sum_probs=51.9
Q ss_pred ccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHh---hc--CceecCHHHHhc-cCcEEEEcCCC
Q psy7896 344 IMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQAS---ME--GYEVTTMEEAAK-EGGIFVTTTGC 413 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~---~~--G~~v~~Leell~-~aDiIi~atgt 413 (718)
..+.||+++|+|.|.+|+.++..|...|++|+++++++.++.+.. .. .....+++++.+ ++|+||.+++.
T Consensus 115 ~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~ 190 (272)
T 1p77_A 115 WLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSA 190 (272)
T ss_dssp CCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCC
Confidence 456899999999999999999999999999999999875432211 11 122334445434 89999998765
No 149
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.39 E-value=0.00031 Score=64.33 Aligned_cols=67 Identities=15% Similarity=0.155 Sum_probs=48.8
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec-----CH---HHH-hccCcEEEEcCCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT-----TM---EEA-AKEGGIFVTTTGC 413 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~-----~L---eel-l~~aDiIi~atgt 413 (718)
.++++.|+|+|.+|+.+|+.|...|.+|+++|++|.........|+.+. +. .++ ++++|+++.++++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~ 80 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSD 80 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCC
Confidence 4678999999999999999999999999999998865444434454321 22 222 3567888877664
No 150
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=97.38 E-value=0.00017 Score=74.27 Aligned_cols=89 Identities=15% Similarity=0.122 Sum_probs=62.0
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-------------cCHHHHhc---cCcEEEEcCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-------------TTMEEAAK---EGGIFVTTTG 412 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-------------~~Leell~---~aDiIi~atg 412 (718)
++|+|||.|.+|..+|..|...|.+|+++++++.........|... .+.+++.+ .+|+|++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 5899999999999999999999999999998875433322334322 23345544 8999999876
Q ss_pred CCCC--cCHHHHhcCCCCeEEEEcCCC
Q psy7896 413 CKDI--IRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~~l--I~~e~l~~MK~gAiLIN~GRg 437 (718)
...+ +-.+....++++.+++++..+
T Consensus 84 ~~~~~~v~~~l~~~l~~~~~iv~~~~g 110 (316)
T 2ew2_A 84 AQQLDAMFKAIQPMITEKTYVLCLLNG 110 (316)
T ss_dssp HHHHHHHHHHHGGGCCTTCEEEECCSS
T ss_pred cccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 5322 111223457889999988654
No 151
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=97.35 E-value=0.00033 Score=77.08 Aligned_cols=89 Identities=19% Similarity=0.234 Sum_probs=64.5
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhh-------------------cC-ce-ecCHHHHhccCcEE
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASM-------------------EG-YE-VTTMEEAAKEGGIF 407 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~-------------------~G-~~-v~~Leell~~aDiI 407 (718)
++|+|||+|.+|..+|..+...|.+|+++|+++.+...... .| .. ..+++++++.+|+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 47999999999999999999999999999998764322211 22 22 34688889999999
Q ss_pred EEcCCCCCC----cC--------HHHHhcCCC---CeEEEEcCCC
Q psy7896 408 VTTTGCKDI----IR--------GEHFLQMRD---DAIVCNIGHF 437 (718)
Q Consensus 408 i~atgt~~l----I~--------~e~l~~MK~---gAiLIN~GRg 437 (718)
+++.++..- .| .+....|++ +.++|+.+..
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv 125 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTV 125 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCC
T ss_pred EEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCc
Confidence 998765431 11 122345788 9999998654
No 152
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=97.35 E-value=0.00023 Score=79.64 Aligned_cols=89 Identities=17% Similarity=0.094 Sum_probs=67.2
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhc-C-------ce-ecCHHHHhcc---CcEEEEcCCCC-C
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASME-G-------YE-VTTMEEAAKE---GGIFVTTTGCK-D 415 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~-G-------~~-v~~Leell~~---aDiIi~atgt~-~ 415 (718)
++|||||+|.+|+.+|..+...|.+|.++++++.+....... | .. ..+++++++. +|+|+++..+. .
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 479999999999999999999999999999887654322222 4 33 3578888874 99999986653 2
Q ss_pred ---CcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 416 ---IIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 416 ---lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
++ .+....++++.++|+++.+.
T Consensus 82 v~~vl-~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 82 TDSTI-EQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHHHH-HHHHHHCCTTCEEEECCCCC
T ss_pred HHHHH-HHHHhhCCCCCEEEECCCCC
Confidence 23 23345789999999998774
No 153
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.32 E-value=0.00078 Score=72.53 Aligned_cols=99 Identities=19% Similarity=0.265 Sum_probs=72.5
Q ss_pred cCcEEEEEecChhHHHHHHHHH-hCC-CEEEEEecCCccHHHHhhc-----Cce---ecCHHHHhccCcEEEEcCCCC--
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLR-LFG-SRVIVTEIDPINALQASME-----GYE---VTTMEEAAKEGGIFVTTTGCK-- 414 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~-~fG-a~Viv~d~dp~~al~a~~~-----G~~---v~~Leell~~aDiIi~atgt~-- 414 (718)
..++++|||.|.+|+..++.+. ..+ -+|.++++++.++...... |.. +.+++++++++|+|+++|...
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~~ 207 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAY 207 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSSE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCCC
Confidence 5789999999999999988764 445 4899999988654332211 532 357899999999999998764
Q ss_pred -CCcCHHHHhcCCCCeEEEEcCCC---CccccHHHHhc
Q psy7896 415 -DIIRGEHFLQMRDDAIVCNIGHF---DCEIQVSWLDK 448 (718)
Q Consensus 415 -~lI~~e~l~~MK~gAiLIN~GRg---d~Eid~~aL~~ 448 (718)
.++.. +.+++|..++++|.. ..|++.+.+..
T Consensus 208 ~pvl~~---~~l~~G~~V~~vgs~~p~~~El~~~~~~~ 242 (350)
T 1x7d_A 208 ATIITP---DMLEPGMHLNAVGGDCPGKTELHADVLRN 242 (350)
T ss_dssp EEEECG---GGCCTTCEEEECSCCBTTBEEECHHHHHT
T ss_pred CceecH---HHcCCCCEEEECCCCCCCceeeCHHHHhc
Confidence 24543 568999999999864 35677655544
No 154
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.31 E-value=0.00053 Score=61.72 Aligned_cols=85 Identities=22% Similarity=0.318 Sum_probs=54.5
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhh-cCcee-----cCHHH---H-hccCcEEEEcCCCCC--
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASM-EGYEV-----TTMEE---A-AKEGGIFVTTTGCKD-- 415 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~-~G~~v-----~~Lee---l-l~~aDiIi~atgt~~-- 415 (718)
+++|+|+|+|.+|+.+++.|...|.+|+++|+++........ .|..+ .+.+. . ++.+|+|+.+++...
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 578999999999999999999999999999988754322221 24422 12222 2 567899888876531
Q ss_pred CcCHHHHhcCCCCeEEE
Q psy7896 416 IIRGEHFLQMRDDAIVC 432 (718)
Q Consensus 416 lI~~e~l~~MK~gAiLI 432 (718)
..-......++++.+++
T Consensus 84 ~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 84 LMSSLLAKSYGINKTIA 100 (140)
T ss_dssp HHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 11112334455554444
No 155
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.31 E-value=0.00059 Score=69.68 Aligned_cols=36 Identities=33% Similarity=0.433 Sum_probs=32.9
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
..+++|.|||.|.||..+|..++.+|.+|+++++.+
T Consensus 150 ~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 150 FRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp GTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred cCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 468999999999999999999999999999987644
No 156
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=97.27 E-value=0.0003 Score=75.85 Aligned_cols=91 Identities=10% Similarity=0.003 Sum_probs=66.7
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcC--------------ce-ecCHHHHhccCcEEEEcC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG--------------YE-VTTMEEAAKEGGIFVTTT 411 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G--------------~~-v~~Leell~~aDiIi~at 411 (718)
.-++|+|||.|.+|..+|..|...|.+|.++++++.........| .. ..+++++++.+|+|+++.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaV 107 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVV 107 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECC
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECC
Confidence 347899999999999999999999999999999875432222212 12 247889999999999987
Q ss_pred CCCCC--cCHHHHhcCCCCeEEEEcCCC
Q psy7896 412 GCKDI--IRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 412 gt~~l--I~~e~l~~MK~gAiLIN~GRg 437 (718)
....+ +-.+....++++.+++++.-|
T Consensus 108 p~~~~~~vl~~i~~~l~~~~ivvs~~kG 135 (356)
T 3k96_A 108 PSFAFHEVITRMKPLIDAKTRIAWGTKG 135 (356)
T ss_dssp CHHHHHHHHHHHGGGCCTTCEEEECCCS
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 65322 112233467889999998765
No 157
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=97.25 E-value=0.00052 Score=73.46 Aligned_cols=91 Identities=21% Similarity=0.251 Sum_probs=69.2
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHh-hcCce-e---cC---HHHHhccCcEEEEcCCCCCCcC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQAS-MEGYE-V---TT---MEEAAKEGGIFVTTTGCKDIIR 418 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~-~~G~~-v---~~---Leell~~aDiIi~atgt~~lI~ 418 (718)
.|++|.|+|.|.||..+++.++.+|++|++++.++.+...+. ..|.. + .+ +.++....|+++.+++....+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~~- 265 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHPL- 265 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCCS-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHHH-
Confidence 799999999999999999999999999999988776543333 34542 1 12 223334679999988765433
Q ss_pred HHHHhcCCCCeEEEEcCCCC
Q psy7896 419 GEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 419 ~e~l~~MK~gAiLIN~GRgd 438 (718)
...++.|+++..++++|...
T Consensus 266 ~~~~~~l~~~G~iv~~g~~~ 285 (366)
T 1yqd_A 266 LPLFGLLKSHGKLILVGAPE 285 (366)
T ss_dssp HHHHHHEEEEEEEEECCCCS
T ss_pred HHHHHHHhcCCEEEEEccCC
Confidence 56789999999999998754
No 158
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.25 E-value=0.00035 Score=72.82 Aligned_cols=90 Identities=13% Similarity=0.066 Sum_probs=67.7
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcCCCC----CCcCHHHHh
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCK----DIIRGEHFL 423 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~----~lI~~e~l~ 423 (718)
||+++|+|.|.+|++++..|...|.+|+++++++.++.+....|....+++++- ++|+||.+|+.- ..++.+.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~~~~~l~-~~DiVInaTp~Gm~~~~~l~~~~l~ 196 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPKS-AFDLIINATSASLHNELPLNKEVLK 196 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEESSCCSS-CCSEEEECCTTCCCCSCSSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEecHHHhc-cCCEEEEcccCCCCCCCCCChHHHH
Confidence 899999999999999999999999999999999876543223455555555544 899999876431 145555333
Q ss_pred -cCCCCeEEEEcCCCC
Q psy7896 424 -QMRDDAIVCNIGHFD 438 (718)
Q Consensus 424 -~MK~gAiLIN~GRgd 438 (718)
.++++.+++++...+
T Consensus 197 ~~l~~~~~v~D~vY~P 212 (269)
T 3phh_A 197 GYFKEGKLAYDLAYGF 212 (269)
T ss_dssp HHHHHCSEEEESCCSS
T ss_pred hhCCCCCEEEEeCCCC
Confidence 567888888887764
No 159
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.24 E-value=0.0014 Score=69.59 Aligned_cols=98 Identities=22% Similarity=0.240 Sum_probs=70.6
Q ss_pred cCcEEEEEecChhHHHHHHHHHh-CC-CEEEEEecCCccHHHHhh----c--CceecCHHHHhccCcEEEEcCCCC-CCc
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRL-FG-SRVIVTEIDPINALQASM----E--GYEVTTMEEAAKEGGIFVTTTGCK-DII 417 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~-fG-a~Viv~d~dp~~al~a~~----~--G~~v~~Leell~~aDiIi~atgt~-~lI 417 (718)
..++++|||.|.+|+..++.+.. .+ -+|.++++++.++..... . ...+.++++++ ++|+|+++|.+. .++
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~~~~~~e~v-~aDvVi~aTp~~~pv~ 202 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEAS-RCDVLVTTTPSRKPVV 202 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHT-SSSEEEECCCCSSCCB
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEEECCHHHHh-CCCEEEEeeCCCCcee
Confidence 57899999999999999998876 44 479999998865432211 1 12256789999 999999987653 345
Q ss_pred CHHHHhcCCCCeEEEEcCCC---CccccHHHHhc
Q psy7896 418 RGEHFLQMRDDAIVCNIGHF---DCEIQVSWLDK 448 (718)
Q Consensus 418 ~~e~l~~MK~gAiLIN~GRg---d~Eid~~aL~~ 448 (718)
.. +.+++|..++++|-. ..|++.+.+..
T Consensus 203 ~~---~~l~~G~~V~~ig~~~p~~~el~~~~~~~ 233 (322)
T 1omo_A 203 KA---EWVEEGTHINAIGADGPGKQELDVEILKK 233 (322)
T ss_dssp CG---GGCCTTCEEEECSCCSTTCCCBCHHHHHT
T ss_pred cH---HHcCCCeEEEECCCCCCCccccCHHHHhc
Confidence 43 468999999999754 24566554443
No 160
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=97.22 E-value=0.00059 Score=68.01 Aligned_cols=87 Identities=14% Similarity=0.174 Sum_probs=61.7
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEE-EecCCccHHHH-hhcCce-ecCHHHHhccCcEEEEcCCCCCCcCHHHHhcC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIV-TEIDPINALQA-SMEGYE-VTTMEEAAKEGGIFVTTTGCKDIIRGEHFLQM 425 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv-~d~dp~~al~a-~~~G~~-v~~Leell~~aDiIi~atgt~~lI~~e~l~~M 425 (718)
++|+|||+|++|..+|+.+...|.+|++ +++++.+.... ...|.. ..+..+.++++|+|++++....+ .+.+..+
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~~~~--~~v~~~l 101 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPYDSI--ADIVTQV 101 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCGGGH--HHHHTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCChHHH--HHHHHHh
Confidence 6899999999999999999999999998 88888654332 122432 23455668899999998754321 2333333
Q ss_pred --CCCeEEEEcCCC
Q psy7896 426 --RDDAIVCNIGHF 437 (718)
Q Consensus 426 --K~gAiLIN~GRg 437 (718)
.++.++++++-+
T Consensus 102 ~~~~~~ivi~~~~g 115 (220)
T 4huj_A 102 SDWGGQIVVDASNA 115 (220)
T ss_dssp SCCTTCEEEECCCC
T ss_pred hccCCCEEEEcCCC
Confidence 247788888765
No 161
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.21 E-value=0.00059 Score=72.01 Aligned_cols=87 Identities=23% Similarity=0.196 Sum_probs=64.3
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcC-----------ce-ecCHHHHhccCcEEEEcCCCCC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG-----------YE-VTTMEEAAKEGGIFVTTTGCKD 415 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G-----------~~-v~~Leell~~aDiIi~atgt~~ 415 (718)
..+|+|||.|++|..+|..|..-|.+|+++++++.+.......| .. ..+.++ ++.+|+|+++..+..
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~~~ 92 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPVQY 92 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCHHH
Confidence 46899999999999999999999999999998875433222233 23 345777 889999999876532
Q ss_pred CcCHHHHhcCC-CCeEEEEcCCC
Q psy7896 416 IIRGEHFLQMR-DDAIVCNIGHF 437 (718)
Q Consensus 416 lI~~e~l~~MK-~gAiLIN~GRg 437 (718)
-.+.+..++ ++.++|++.-+
T Consensus 93 --~~~v~~~l~~~~~~vv~~~nG 113 (335)
T 1z82_A 93 --IREHLLRLPVKPSMVLNLSKG 113 (335)
T ss_dssp --HHHHHTTCSSCCSEEEECCCC
T ss_pred --HHHHHHHhCcCCCEEEEEeCC
Confidence 234455565 68889988754
No 162
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.21 E-value=0.001 Score=69.74 Aligned_cols=90 Identities=13% Similarity=0.159 Sum_probs=61.9
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhcCceecCHHHH--hccCcEEEEcCCC--CC--
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASMEGYEVTTMEEA--AKEGGIFVTTTGC--KD-- 415 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~G~~v~~Leel--l~~aDiIi~atgt--~~-- 415 (718)
+.++.|+++.|+|.|.+|++++..|...|+ +|+++++++.++.+ ....+...+++++ + ++|+||.+|+. ..
T Consensus 117 ~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~-La~~~~~~~~~~l~~l-~~DivInaTp~Gm~~~~ 194 (282)
T 3fbt_A 117 RVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSE-IYGEFKVISYDELSNL-KGDVIINCTPKGMYPKE 194 (282)
T ss_dssp TCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHH-HCTTSEEEEHHHHTTC-CCSEEEECSSTTSTTST
T ss_pred CCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH-HHHhcCcccHHHHHhc-cCCEEEECCccCccCCC
Confidence 345789999999999999999999999999 89999988865432 2233333444443 4 89999988743 11
Q ss_pred ---CcCHHHHhcCCCCeEEEEcCCC
Q psy7896 416 ---IIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 416 ---lI~~e~l~~MK~gAiLIN~GRg 437 (718)
.+.. +.++++.+++++...
T Consensus 195 ~~~pi~~---~~l~~~~~v~DlvY~ 216 (282)
T 3fbt_A 195 GESPVDK---EVVAKFSSAVDLIYN 216 (282)
T ss_dssp TCCSSCH---HHHTTCSEEEESCCS
T ss_pred ccCCCCH---HHcCCCCEEEEEeeC
Confidence 1332 234566666666554
No 163
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=97.18 E-value=0.0082 Score=63.53 Aligned_cols=170 Identities=19% Similarity=0.078 Sum_probs=114.4
Q ss_pred cchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHHHHHHHHHhcc
Q psy7896 250 GCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEVAALHLEHLGV 329 (718)
Q Consensus 250 G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i~~~~l~~lgv 329 (718)
|-+||+.|.+.--.. + . -+.|+... ..-.+...++--+++|++...+...=.|+.++-|.+-+
T Consensus 85 ~kgEsl~DTarvls~-~--~-D~iviR~~-~~~~~~~la~~~~vPVINa~~~~~HPtQaLaDl~Ti~e------------ 147 (301)
T 2ef0_A 85 GEREPVRDVAKNLER-F--V-EGIAARVF-RHETVEALARHAKVPVVNALSDRAHPLQALADLLTLKE------------ 147 (301)
T ss_dssp TTCCCHHHHHHHHTT-T--C-SEEEEECS-SHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHH------------
T ss_pred CCCCchHHHHHHHHH-h--C-CEEEEecC-ChHHHHHHHHHCCCCEEeCCCCccCchHHHHHHHHHHH------------
Confidence 567998886654222 1 2 34444432 22233334455568999988777777778777766532
Q ss_pred cccccchhhhhhhcccccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhh--cCce-ecCHHHHhccCc
Q psy7896 330 KLTKLTEDQAKYLDIMLAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASM--EGYE-VTTMEEAAKEGG 405 (718)
Q Consensus 330 ~~~~~~~~~~~~~g~eL~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~--~G~~-v~~Leell~~aD 405 (718)
..| .+.|++|++||- +++.+..+..+..||++|.++-+.......... ..+. ..+++|+++++|
T Consensus 148 -----------~~g-~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aD 215 (301)
T 2ef0_A 148 -----------VFG-GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAH 215 (301)
T ss_dssp -----------HHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCS
T ss_pred -----------HhC-CcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCC
Confidence 112 588999999998 789999999999999999998543322111110 0133 568999999999
Q ss_pred EEEEcC----C------------CCCCcCHHHHhcCCCCeEEEEcCCC--CccccHHHHhc
Q psy7896 406 IFVTTT----G------------CKDIIRGEHFLQMRDDAIVCNIGHF--DCEIQVSWLDK 448 (718)
Q Consensus 406 iIi~at----g------------t~~lI~~e~l~~MK~gAiLIN~GRg--d~Eid~~aL~~ 448 (718)
+|.+.. + ...-++.+.++.+|+++++.-++-. +.||+.+-+..
T Consensus 216 vvy~~~~~smg~~~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mHplP~~Rg~EI~~eV~d~ 276 (301)
T 2ef0_A 216 ALYTDVWTSMGQEAEREKRLRDFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETTEEAVHG 276 (301)
T ss_dssp EEEECCCC--------CHHHHHTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBCHHHHHS
T ss_pred EEEecCcccCCcccchhHHHHHhhccccCHHHHHhcCCCcEEECCCCCCCCCccCHHHhCC
Confidence 999831 1 1345899999999999999999853 35888665543
No 164
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.17 E-value=0.0015 Score=69.54 Aligned_cols=95 Identities=17% Similarity=0.158 Sum_probs=63.3
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecC---CccHHHHh-----hcC--ceec---C---HHHHhccCc
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEID---PINALQAS-----MEG--YEVT---T---MEEAAKEGG 405 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~d---p~~al~a~-----~~G--~~v~---~---Leell~~aD 405 (718)
+.+++||++.|+|.|.+|++++..|...|+ +|++++++ +.++.+.. ..+ +... + +.+.++++|
T Consensus 149 ~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aD 228 (315)
T 3tnl_A 149 GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESV 228 (315)
T ss_dssp TCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred CCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCC
Confidence 456789999999999999999999999999 89999988 43332111 112 1222 2 456678999
Q ss_pred EEEEcCCCCCCcCH---H---HHhcCCCCeEEEEcCCCC
Q psy7896 406 IFVTTTGCKDIIRG---E---HFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 406 iIi~atgt~~lI~~---e---~l~~MK~gAiLIN~GRgd 438 (718)
+||.+|+- ++... . ..+.++++.+++++-..+
T Consensus 229 iIINaTp~-Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P 266 (315)
T 3tnl_A 229 IFTNATGV-GMKPFEGETLLPSADMLRPELIVSDVVYKP 266 (315)
T ss_dssp EEEECSST-TSTTSTTCCSCCCGGGCCTTCEEEESCCSS
T ss_pred EEEECccC-CCCCCCCCCCCCcHHHcCCCCEEEEeccCC
Confidence 99988642 11110 0 234467777777766543
No 165
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.17 E-value=0.0013 Score=72.92 Aligned_cols=106 Identities=21% Similarity=0.149 Sum_probs=80.4
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCC---EEEEEe----cC--CccH-----HH------HhhcCc--eecCHHHH
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGS---RVIVTE----ID--PINA-----LQ------ASMEGY--EVTTMEEA 400 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa---~Viv~d----~d--p~~a-----l~------a~~~G~--~v~~Leel 400 (718)
|..+.+++|.|+|.|..|+++++.|...|+ +|+++| ++ ..+. +. +..... ...++.++
T Consensus 181 g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~ 260 (439)
T 2dvm_A 181 GKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEA 260 (439)
T ss_dssp TCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHH
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHH
Confidence 567899999999999999999999999998 799998 65 2111 11 000111 23468899
Q ss_pred hccCcEEEEcCCC-CCCcCHHHHhcCCCCeEEEEcCCCCccccHHHHhc
Q psy7896 401 AKEGGIFVTTTGC-KDIIRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDK 448 (718)
Q Consensus 401 l~~aDiIi~atgt-~~lI~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~ 448 (718)
++.+|+||.+|+. .++++.+.++.|+++.+++..+.-..|+.++...+
T Consensus 261 l~~aDVlInaT~~~~G~~~~e~v~~m~~~~iVfDLynP~~t~~~~~A~~ 309 (439)
T 2dvm_A 261 LKDADVLISFTRPGPGVIKPQWIEKMNEDAIVFPLANPVPEILPEEAKK 309 (439)
T ss_dssp HTTCSEEEECSCCCSSSSCHHHHTTSCTTCEEEECCSSSCSSCHHHHHH
T ss_pred hccCCEEEEcCCCccCCCChHHHHhcCCCCEEEECCCCCCcchHHHHHH
Confidence 9999999998876 48999888899999999999965444566654444
No 166
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=97.15 E-value=0.00054 Score=72.40 Aligned_cols=90 Identities=14% Similarity=0.062 Sum_probs=63.6
Q ss_pred CcEEEEEecChhHHHHHHHHHhCC-------CEEEEEecCCc-----cHHHHhh--------------cCce-ecCHHHH
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFG-------SRVIVTEIDPI-----NALQASM--------------EGYE-VTTMEEA 400 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fG-------a~Viv~d~dp~-----~al~a~~--------------~G~~-v~~Leel 400 (718)
.++|+|||.|.+|..+|..+...| .+|+++++++. ....... .+.. ..+++++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 468999999999999999998878 89999998876 3222111 1222 2468888
Q ss_pred hccCcEEEEcCCCCCCc--CHHHHhcCCCCeEEEEcCCC
Q psy7896 401 AKEGGIFVTTTGCKDII--RGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 401 l~~aDiIi~atgt~~lI--~~e~l~~MK~gAiLIN~GRg 437 (718)
++.+|+|+++.....+- -.+....++++++++++..+
T Consensus 88 ~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~G 126 (354)
T 1x0v_A 88 AEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKG 126 (354)
T ss_dssp HTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCC
T ss_pred HcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCc
Confidence 99999999987653221 11222456789999988764
No 167
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.14 E-value=0.00062 Score=70.91 Aligned_cols=93 Identities=14% Similarity=0.199 Sum_probs=65.7
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHh--hc--CceecCHHHHh-ccCcEEEEcCCCC--
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQAS--ME--GYEVTTMEEAA-KEGGIFVTTTGCK-- 414 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~--~~--G~~v~~Leell-~~aDiIi~atgt~-- 414 (718)
+.+++||++.|+|.|.+|+.++..|...|+ +|+++++++.++.+.. .. .....+++++- +++|+||.+|+..
T Consensus 115 ~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~ 194 (272)
T 3pwz_A 115 GEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLT 194 (272)
T ss_dssp CCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGG
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCC
Confidence 557899999999999999999999999996 9999998876543211 11 13445566654 6899999886531
Q ss_pred ---CCcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 415 ---DIIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 415 ---~lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
-.+.. +.++++.+++++...+
T Consensus 195 ~~~~~i~~---~~l~~~~~V~DlvY~P 218 (272)
T 3pwz_A 195 ADLPPLPA---DVLGEAALAYELAYGK 218 (272)
T ss_dssp TCCCCCCG---GGGTTCSEEEESSCSC
T ss_pred CCCCCCCH---HHhCcCCEEEEeecCC
Confidence 12332 3456777777776543
No 168
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.12 E-value=0.00052 Score=71.28 Aligned_cols=94 Identities=17% Similarity=0.123 Sum_probs=63.1
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhh---c--------CceecCHHHHhccCcEEEEcC
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASM---E--------GYEVTTMEEAAKEGGIFVTTT 411 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~---~--------G~~v~~Leell~~aDiIi~at 411 (718)
+.++.||++.|+|.|.||+++|+.|...| +|+++++++.+..+... . ...+.++.+.+..+|++|.++
T Consensus 123 ~~~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~a 201 (287)
T 1nvt_A 123 IGRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINAT 201 (287)
T ss_dssp HCCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECS
T ss_pred CCCcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECC
Confidence 35688999999999999999999999999 99999887654321110 0 012333355667899999887
Q ss_pred CCCCC--cCHH---HHhcCCCCeEEEEcCCC
Q psy7896 412 GCKDI--IRGE---HFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 412 gt~~l--I~~e---~l~~MK~gAiLIN~GRg 437 (718)
+.... .+.. ..+.++++++++++...
T Consensus 202 g~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y~ 232 (287)
T 1nvt_A 202 PIGMYPNIDVEPIVKAEKLREDMVVMDLIYN 232 (287)
T ss_dssp CTTCTTCCSSCCSSCSTTCCSSSEEEECCCS
T ss_pred CCCCCCCCCCCCCCCHHHcCCCCEEEEeeeC
Confidence 64221 0000 13456778888877653
No 169
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=97.11 E-value=0.0082 Score=63.71 Aligned_cols=170 Identities=20% Similarity=0.094 Sum_probs=114.2
Q ss_pred cchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHHHHHHHHHhcc
Q psy7896 250 GCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEVAALHLEHLGV 329 (718)
Q Consensus 250 G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i~~~~l~~lgv 329 (718)
|-+||+.|...--.. + --+.|+.. +-.-.+..+++--+++|++...+...=.|+.++-|.+-+
T Consensus 79 ~kgEsl~DTarvls~-~---~D~iviR~-~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~e------------ 141 (307)
T 2i6u_A 79 GRDETLQDTAKVLSR-Y---VDAIVWRT-FGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIAE------------ 141 (307)
T ss_dssp GGTCCHHHHHHHHHH-H---EEEEEEEC-SSHHHHHHHHHHCSSCEEESCCSSCCHHHHHHHHHHHHH------------
T ss_pred CCCCCHHHHHHHHHH-h---CCEEEEec-CChhHHHHHHhhCCCCEEcCCCCCcCccHHHHHHHHHHH------------
Confidence 567998876653222 1 13444443 323333444455668999887766666777777666532
Q ss_pred cccccchhhhhhhcccccCcEEEEEecC--hhHHHHHHHHHhCCCEEEEEecCCcc---HH-H-----HhhcC--ce-ec
Q psy7896 330 KLTKLTEDQAKYLDIMLAGKVAVVAGYG--DVGKGCAQSLRLFGSRVIVTEIDPIN---AL-Q-----ASMEG--YE-VT 395 (718)
Q Consensus 330 ~~~~~~~~~~~~~g~eL~GktVGIIG~G--~IG~~vA~~l~~fGa~Viv~d~dp~~---al-~-----a~~~G--~~-v~ 395 (718)
..| .+.|++|++||-| ++....+..+..||++|.++-+.... .. + +...| +. ..
T Consensus 142 -----------~~g-~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 209 (307)
T 2i6u_A 142 -----------RKG-ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTA 209 (307)
T ss_dssp -----------HHS-CCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred -----------HhC-CcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 112 5889999999996 99999999999999999998543221 11 1 11235 22 46
Q ss_pred CHHHHhccCcEEEEcC----C------------CCCCcCHHHHhcCCCCeEEEEcCCC--CccccHHHHhc
Q psy7896 396 TMEEAAKEGGIFVTTT----G------------CKDIIRGEHFLQMRDDAIVCNIGHF--DCEIQVSWLDK 448 (718)
Q Consensus 396 ~Leell~~aDiIi~at----g------------t~~lI~~e~l~~MK~gAiLIN~GRg--d~Eid~~aL~~ 448 (718)
+++|+++.+|+|.+.. | ...-++.+.++.+|+++++.-++-. +.||+.+-+..
T Consensus 210 d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~eV~d~ 280 (307)
T 2i6u_A 210 DAHAAAAGADVLVTDTWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCLPAHRGDEITDAVMDG 280 (307)
T ss_dssp CHHHHHTTCSEEEECCSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHHHHTS
T ss_pred CHHHHhcCCCEEEecceecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCCCCCCCcccCHhHhCC
Confidence 7999999999999831 1 1235899999999999999999863 35787665443
No 170
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.11 E-value=0.001 Score=62.09 Aligned_cols=87 Identities=14% Similarity=0.079 Sum_probs=56.1
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCcc---HHH-HhhcCceec--------CHHHH-hccCcEEEEcCCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPIN---ALQ-ASMEGYEVT--------TMEEA-AKEGGIFVTTTGC 413 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~---al~-a~~~G~~v~--------~Leel-l~~aDiIi~atgt 413 (718)
..+++.|+|+|++|+.+++.|...|.+|+++|+++.. .+. ....|+.+. .++++ +..+|.|+.++++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 3578999999999999999999999999999987521 111 122344321 24444 6789998888765
Q ss_pred C--CCcCHHHHhcCCCCeEEEE
Q psy7896 414 K--DIIRGEHFLQMRDDAIVCN 433 (718)
Q Consensus 414 ~--~lI~~e~l~~MK~gAiLIN 433 (718)
. ++.-......+.+...++.
T Consensus 82 d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 82 DADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp HHHHHHHHHHHHHHTSSSCEEE
T ss_pred hHHHHHHHHHHHHHCCCCEEEE
Confidence 3 2222233444534444444
No 171
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=97.09 E-value=0.00083 Score=75.15 Aligned_cols=89 Identities=17% Similarity=0.179 Sum_probs=64.8
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhc-------C-------------ce-ecCHHHHhccCcE
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASME-------G-------------YE-VTTMEEAAKEGGI 406 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~-------G-------------~~-v~~Leell~~aDi 406 (718)
.++|+|||.|.+|..+|..|...|.+|+++|+++.+....... | .. ..+++++++.+|+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 4799999999999999999999999999999987543221111 1 12 2357788899999
Q ss_pred EEEcCCCC----------CC--cCHHHHhcCCCCeEEEEcCC
Q psy7896 407 FVTTTGCK----------DI--IRGEHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 407 Ii~atgt~----------~l--I~~e~l~~MK~gAiLIN~GR 436 (718)
|+++.++. .+ +-.+....++++.++++.+-
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ST 129 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKST 129 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred EEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 99986552 11 11222356899999999874
No 172
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=97.09 E-value=0.00072 Score=73.80 Aligned_cols=86 Identities=20% Similarity=0.149 Sum_probs=61.6
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCc------------------e-ecCHHHHhccCcEEEE
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGY------------------E-VTTMEEAAKEGGIFVT 409 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~------------------~-v~~Leell~~aDiIi~ 409 (718)
++|+|||.|.+|..+|..|.. |.+|+++|+++.+.......+. . ..+..++++.+|+|++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 479999999999999999998 9999999998764332222221 2 2357788899999999
Q ss_pred cCCCCC-----------CcC--HHHHhcCCCCeEEEEcCC
Q psy7896 410 TTGCKD-----------IIR--GEHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 410 atgt~~-----------lI~--~e~l~~MK~gAiLIN~GR 436 (718)
+.++.. +.. ..... ++++.++|+.+.
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST 118 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKST 118 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSC
T ss_pred ecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCC
Confidence 876641 111 12234 789999998544
No 173
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=97.09 E-value=0.011 Score=62.96 Aligned_cols=171 Identities=16% Similarity=0.094 Sum_probs=115.7
Q ss_pred ccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHHHHHHHHHhc
Q psy7896 249 YGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEVAALHLEHLG 328 (718)
Q Consensus 249 ~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i~~~~l~~lg 328 (718)
.|-+||+.|.+.--.. + . -+.|+.. +-.-.+...++--+++|++...+...=.|+.++-|.+-+
T Consensus 85 ~~kgEsl~DTarvls~-~--~-D~iviR~-~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~e----------- 148 (315)
T 1pvv_A 85 LRRGETIADTARVLSR-Y--V-DAIMARV-YDHKDVEDLAKYATVPVINGLSDFSHPCQALADYMTIWE----------- 148 (315)
T ss_dssp TTTTCCHHHHHHHHTT-T--C-SEEEEEC-SSHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHH-----------
T ss_pred CCCCcCHHHHHHHHHH-h--C-cEEEEec-CchHHHHHHHHhCCCCEEcCCCCCCCcHHHHHHHHHHHH-----------
Confidence 3567998886654222 1 2 2444443 323333444455569999988776666777777766532
Q ss_pred ccccccchhhhhhhcccccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCcc---HH-H-----HhhcCce---ec
Q psy7896 329 VKLTKLTEDQAKYLDIMLAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPIN---AL-Q-----ASMEGYE---VT 395 (718)
Q Consensus 329 v~~~~~~~~~~~~~g~eL~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~---al-~-----a~~~G~~---v~ 395 (718)
..| .+.|++|++||- +++.+..+..+..||++|.++-+.... .. + +...|.. ..
T Consensus 149 ------------~~g-~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~ 215 (315)
T 1pvv_A 149 ------------KKG-TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLH 215 (315)
T ss_dssp ------------HHS-CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred ------------HhC-CcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 112 588999999998 789999999999999999998543221 11 1 1133532 46
Q ss_pred CHHHHhccCcEEEEcC----C------------CCCCcCHHHHhcCCCCeEEEEcCCC--CccccHHHHhc
Q psy7896 396 TMEEAAKEGGIFVTTT----G------------CKDIIRGEHFLQMRDDAIVCNIGHF--DCEIQVSWLDK 448 (718)
Q Consensus 396 ~Leell~~aDiIi~at----g------------t~~lI~~e~l~~MK~gAiLIN~GRg--d~Eid~~aL~~ 448 (718)
+++|+++++|+|.+.. | ...-++.+.++.+|+++++.-++-. +.||+.+-+..
T Consensus 216 d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~lP~~Rg~EI~~eV~d~ 286 (315)
T 1pvv_A 216 DPVKAVKDADVIYTDVWASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDDVIDS 286 (315)
T ss_dssp CHHHHTTTCSEEEECCCCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBCHHHHTS
T ss_pred CHHHHhCCCCEEEEcceeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCCCCCCCCccCHHHhCC
Confidence 7999999999999841 1 1245899999999999999999863 35888665543
No 174
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=97.08 E-value=0.00061 Score=69.28 Aligned_cols=89 Identities=12% Similarity=0.031 Sum_probs=60.7
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhh---cCc----e-ecCHHHHhccCcEEEEcCCCCCCcC--
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASM---EGY----E-VTTMEEAAKEGGIFVTTTGCKDIIR-- 418 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~---~G~----~-v~~Leell~~aDiIi~atgt~~lI~-- 418 (718)
++|+|||.|.+|..+|..|...|.+|+++++++.+...... .|. . ..+..+.++.+|+|+++.....+-.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~~~~v~ 80 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAV 80 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHHhHHHHH
Confidence 47999999999999999999999999999988753211111 121 0 1233467789999999877654310
Q ss_pred HHHHhcCCCCeEEEEcCCC
Q psy7896 419 GEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 419 ~e~l~~MK~gAiLIN~GRg 437 (718)
.+....++++.+++++.-+
T Consensus 81 ~~l~~~l~~~~~vv~~~~g 99 (291)
T 1ks9_A 81 KSLASTLPVTTPILLIHNG 99 (291)
T ss_dssp HHHHTTSCTTSCEEEECSS
T ss_pred HHHHhhCCCCCEEEEecCC
Confidence 1223456788888887544
No 175
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.08 E-value=0.0013 Score=67.72 Aligned_cols=89 Identities=17% Similarity=0.228 Sum_probs=65.4
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhc-C-ceecCHHHHhccCcEEEEcCCC--C---CC
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASME-G-YEVTTMEEAAKEGGIFVTTTGC--K---DI 416 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~-G-~~v~~Leell~~aDiIi~atgt--~---~l 416 (718)
.++| +++|||.|.+|++++..|...|+ +|+++++++.++.+.... + ....++.++++++|+||.+|.. + ..
T Consensus 106 ~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~~~ 184 (253)
T 3u62_A 106 EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEELP 184 (253)
T ss_dssp CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCCCS
T ss_pred CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCCCC
Confidence 4678 99999999999999999999999 899999987654322111 1 2344677888999999987642 1 13
Q ss_pred cCHHHHhcCCCCeEEEEcCCC
Q psy7896 417 IRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 417 I~~e~l~~MK~gAiLIN~GRg 437 (718)
++. +.++++.+++++...
T Consensus 185 i~~---~~l~~~~~V~Divy~ 202 (253)
T 3u62_A 185 VSD---DSLKNLSLVYDVIYF 202 (253)
T ss_dssp CCH---HHHTTCSEEEECSSS
T ss_pred CCH---HHhCcCCEEEEeeCC
Confidence 443 335788888888776
No 176
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.07 E-value=0.0011 Score=69.43 Aligned_cols=93 Identities=17% Similarity=0.117 Sum_probs=65.1
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHh---h---cCce--e---cCHHHHhccCcEEEEc
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQAS---M---EGYE--V---TTMEEAAKEGGIFVTT 410 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~---~---~G~~--v---~~Leell~~aDiIi~a 410 (718)
+..++||++.|+|.|.+|+.++..|...|+ +|+++++++.++.+.. . .+.. . .++++.++++|+||.+
T Consensus 122 ~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVIna 201 (283)
T 3jyo_A 122 LPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNA 201 (283)
T ss_dssp CTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEEC
T ss_pred CcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEEC
Confidence 346899999999999999999999999999 7999998876542211 0 0111 2 2677888999999988
Q ss_pred CCC--CC----CcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 411 TGC--KD----IIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 411 tgt--~~----lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
|+. .. .+. .+.++++.+++++-..+
T Consensus 202 Tp~Gm~~~~~~pi~---~~~l~~~~~v~DlvY~P 232 (283)
T 3jyo_A 202 TPMGMPAHPGTAFD---VSCLTKDHWVGDVVYMP 232 (283)
T ss_dssp SSTTSTTSCSCSSC---GGGCCTTCEEEECCCSS
T ss_pred CCCCCCCCCCCCCC---HHHhCCCCEEEEecCCC
Confidence 742 11 122 24466777777665543
No 177
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=97.07 E-value=0.0017 Score=72.20 Aligned_cols=90 Identities=16% Similarity=0.228 Sum_probs=67.1
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhh-------------------cC-cee-cCHHHHhccCcE
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASM-------------------EG-YEV-TTMEEAAKEGGI 406 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~-------------------~G-~~v-~~Leell~~aDi 406 (718)
.-+++|||.|.+|..+|..|...|.+|+++|+++.+...... .| ..+ .++.+++++||+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv 87 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA 87 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence 358999999999999999999999999999999875322211 12 233 578899999999
Q ss_pred EEEcCCCCC-----------Cc--CHHHHhcCCCCeEEEEcCCC
Q psy7896 407 FVTTTGCKD-----------II--RGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 407 Ii~atgt~~-----------lI--~~e~l~~MK~gAiLIN~GRg 437 (718)
|+++.+|.. +. -......|+++.++|+.+-.
T Consensus 88 vii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv 131 (446)
T 4a7p_A 88 VFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTV 131 (446)
T ss_dssp EEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCC
T ss_pred EEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 999854431 11 12334689999999998753
No 178
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=97.07 E-value=0.0089 Score=63.91 Aligned_cols=185 Identities=15% Similarity=0.114 Sum_probs=121.6
Q ss_pred ccceEEEecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhh
Q psy7896 229 LGVPAINVNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA 308 (718)
Q Consensus 229 l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~A 308 (718)
|+-=++..+.+.+ ..|-+||+.|.+.--.. + . -+.|+.. +..-.+..+++--+++|++...+...=.|+
T Consensus 83 LGg~~i~l~~~~s------s~~kgEsl~DTarvLs~-~--~-D~iviR~-~~~~~~~~lA~~~~vPVINa~~~~~HPtQa 151 (325)
T 1vlv_A 83 EGGHPIFLSPNDI------HLGAKESLEDTARVLGR-M--V-DAIMFRG-YKQETVEKLAEYSGVPVYNGLTDEFHPTQA 151 (325)
T ss_dssp TTCEEEEECTTTC------CTTTSSCHHHHHHHHHT-T--C-SEEEEES-SCHHHHHHHHHHHCSCEEESCCSSCCHHHH
T ss_pred cCCeEEEECCccc------cCCCCcCHHHHHHHHHH-h--C-CEEEEEC-CChHHHHHHHHhCCCCEEeCCCCCCCcHHH
Confidence 4555666654422 23567998886653222 1 2 2444443 333333444555679999987776666777
Q ss_pred hhhhhhhhHHHHHHHHHHhcccccccchhhhhhhcccccCcEEEEEecC--hhHHHHHHHHHhCCCEEEEEecCCcc---
Q psy7896 309 SMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGYG--DVGKGCAQSLRLFGSRVIVTEIDPIN--- 383 (718)
Q Consensus 309 vaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~G--~IG~~vA~~l~~fGa~Viv~d~dp~~--- 383 (718)
+++-|.+-+ ..| .+.|++|++||-| ++....+..+..||++|.++-+....
T Consensus 152 LaDl~Ti~e-----------------------~~g-~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~ 207 (325)
T 1vlv_A 152 LADLMTIEE-----------------------NFG-RLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRS 207 (325)
T ss_dssp HHHHHHHHH-----------------------HHS-CSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCH
T ss_pred HHHHHHHHH-----------------------HhC-CcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCH
Confidence 777666532 112 5889999999996 99999999999999999998542221
Q ss_pred HH-H-----HhhcCce---ecCHHHHhccCcEEEEcC----C------------CCCCcCHHHHhcC-CCCeEEEEcCCC
Q psy7896 384 AL-Q-----ASMEGYE---VTTMEEAAKEGGIFVTTT----G------------CKDIIRGEHFLQM-RDDAIVCNIGHF 437 (718)
Q Consensus 384 al-~-----a~~~G~~---v~~Leell~~aDiIi~at----g------------t~~lI~~e~l~~M-K~gAiLIN~GRg 437 (718)
.. + +...|.. ..+++|+++++|+|.+.. | ...-++.+.++.+ |+++++.-++-.
T Consensus 208 ~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~LP~ 287 (325)
T 1vlv_A 208 DVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLPA 287 (325)
T ss_dssp HHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECCCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECSCC
T ss_pred HHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEeccccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCCCC
Confidence 11 1 1133532 457999999999999831 1 1245899999999 999999999863
Q ss_pred --CccccHHHHhc
Q psy7896 438 --DCEIQVSWLDK 448 (718)
Q Consensus 438 --d~Eid~~aL~~ 448 (718)
+.||+.+-+..
T Consensus 288 ~Rg~EI~~eV~d~ 300 (325)
T 1vlv_A 288 VKGQEVTYEVIEG 300 (325)
T ss_dssp CBTTTBCHHHHTS
T ss_pred CCCcccCHHHhCC
Confidence 35787665443
No 179
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.06 E-value=0.0006 Score=69.25 Aligned_cols=92 Identities=14% Similarity=0.127 Sum_probs=65.4
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHh-hc-Cceec--C-HHHHhccCcEEEEcCCCCCCc
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQAS-ME-GYEVT--T-MEEAAKEGGIFVTTTGCKDII 417 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~-~~-G~~v~--~-Leell~~aDiIi~atgt~~lI 417 (718)
..++.||+|.|||.|.+|...++.|...|++|++++++....++.. .. +..+. + -++.+..+|+|+.+|+.. -+
T Consensus 26 fl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~-~~ 104 (223)
T 3dfz_A 26 MLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQ-AV 104 (223)
T ss_dssp EECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCT-HH
T ss_pred EEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCH-HH
Confidence 3579999999999999999999999999999999987655443322 12 22221 1 134577899999999875 44
Q ss_pred CHHHHhcCCCCeEEEEcCC
Q psy7896 418 RGEHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 418 ~~e~l~~MK~gAiLIN~GR 436 (718)
|.......+ -.++||+..
T Consensus 105 N~~I~~~ak-~gi~VNvvD 122 (223)
T 3dfz_A 105 NKFVKQHIK-NDQLVNMAS 122 (223)
T ss_dssp HHHHHHHSC-TTCEEEC--
T ss_pred HHHHHHHHh-CCCEEEEeC
Confidence 555555556 667888754
No 180
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=97.04 E-value=0.01 Score=63.78 Aligned_cols=175 Identities=16% Similarity=0.075 Sum_probs=116.3
Q ss_pred ccceEEEecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhh
Q psy7896 229 LGVPAINVNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA 308 (718)
Q Consensus 229 l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~A 308 (718)
|+--++..+.+.+ ..|-+||+.|...--.. + .. +.|+. ++---.+...++--+++|++...+...=.|+
T Consensus 70 LGg~~i~l~~~~s------s~~kgEsl~DTarvLs~-~--~D-~IviR-~~~~~~~~~lA~~s~vPVINa~~~~~HPtQ~ 138 (335)
T 1dxh_A 70 QGANVTYIDPNSS------QIGHKESMKDTARVLGR-M--YD-AIEYR-GFKQEIVEELAKFAGVPVFNGLTDEYHPTQM 138 (335)
T ss_dssp TTCEEEEECTTTC------CBTTTBCHHHHHHHHHH-H--CS-EEEEE-CSCHHHHHHHHHHSSSCEEEEECSSCCHHHH
T ss_pred cCCeEEEECCccc------cCcCCCcHHHHHHHHHh-h--CC-EEEEe-cCChhHHHHHHHhCCCCEEcCCCCCCCcHHH
Confidence 4445666654422 23667998876653222 2 22 33333 2333334445556679999988777777777
Q ss_pred hhhhhhhhHHHHHHHHHHhcccccccchhhhhhhcccccCcEEEEEecC--hhHHHHHHHHHhCCCEEEEEecCCcc---
Q psy7896 309 SMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGYG--DVGKGCAQSLRLFGSRVIVTEIDPIN--- 383 (718)
Q Consensus 309 vaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~G--~IG~~vA~~l~~fGa~Viv~d~dp~~--- 383 (718)
.++-|.+.+ ..|..+.|++|++||=| +++...+..+..||++|.++-+....
T Consensus 139 LaDl~Ti~e-----------------------~~g~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~ 195 (335)
T 1dxh_A 139 LADVLTMRE-----------------------HSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHD 195 (335)
T ss_dssp HHHHHHHHH-----------------------TCSSCGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCH
T ss_pred HHHHHHHHH-----------------------HcCCCcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCH
Confidence 777665532 12336889999999996 99999999999999999998543221
Q ss_pred HH-H-----HhhcCce---ecCHHHHhccCcEEEEcC----C-------------CCCCcCHHHHhcC-CCCeEEEEcCC
Q psy7896 384 AL-Q-----ASMEGYE---VTTMEEAAKEGGIFVTTT----G-------------CKDIIRGEHFLQM-RDDAIVCNIGH 436 (718)
Q Consensus 384 al-~-----a~~~G~~---v~~Leell~~aDiIi~at----g-------------t~~lI~~e~l~~M-K~gAiLIN~GR 436 (718)
.. + +...|.. ..+++|+++.+|||.+.. | ...-+|.+.++.+ |+++++.-+.-
T Consensus 196 ~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP 275 (335)
T 1dxh_A 196 EFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLP 275 (335)
T ss_dssp HHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECSC
T ss_pred HHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeCCccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCCC
Confidence 11 1 1133532 468999999999999831 1 1246899999999 99999999976
Q ss_pred C
Q psy7896 437 F 437 (718)
Q Consensus 437 g 437 (718)
.
T Consensus 276 ~ 276 (335)
T 1dxh_A 276 A 276 (335)
T ss_dssp C
T ss_pred C
Confidence 4
No 181
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=97.02 E-value=0.0088 Score=63.27 Aligned_cols=185 Identities=17% Similarity=0.122 Sum_probs=119.1
Q ss_pred ccceEEEecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEe-ecCchhhhh
Q psy7896 229 LGVPAINVNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVT-EIDPINALQ 307 (718)
Q Consensus 229 l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~-D~dp~r~v~ 307 (718)
|+-=++..+++..- ..|-+||+.|...--.. + .. +.|+....-| .+...++--+++|++. +.+...=.|
T Consensus 63 LGg~~i~l~~~~~s-----~~~kgEsl~DTarvls~-~--~D-~iviR~~~~~-~~~~la~~~~vPVINaG~g~~~HPtQ 132 (299)
T 1pg5_A 63 LGGDVIGFSGEEST-----SVAKGENLADTIRMLNN-Y--SD-GIVMRHKYDG-ASRFASEISDIPVINAGDGKHEHPTQ 132 (299)
T ss_dssp TTCEEEEEECC------------CCCHHHHHHHHHH-H--CS-EEEEEESSBT-HHHHHHHHCSSCEEEEEETTTBCHHH
T ss_pred hCCEEEEeCCCCcc-----cccCCCCHHHHHHHHHH-h--CC-EEEEeCCChh-HHHHHHHhCCCCEEeCCCCCCcCcHH
Confidence 44445555433211 13567888776553222 2 22 4444433222 3344455667999998 888777778
Q ss_pred hhhhhhhhhHHHHHHHHHHhcccccccchhhhhhhcccccCcEEEEEec---ChhHHHHHHHHHhC-CCEEEEEecCCcc
Q psy7896 308 ASMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGY---GDVGKGCAQSLRLF-GSRVIVTEIDPIN 383 (718)
Q Consensus 308 AvaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~---G~IG~~vA~~l~~f-Ga~Viv~d~dp~~ 383 (718)
+.++-|.+.+ ..| .+.|++|++||= +++....+..+..| |++|.++-+....
T Consensus 133 ~LaDl~Ti~e-----------------------~~g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~ 188 (299)
T 1pg5_A 133 AVIDIYTINK-----------------------HFN-TIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLR 188 (299)
T ss_dssp HHHHHHHHHH-----------------------HHS-CSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGC
T ss_pred HHHHHHHHHH-----------------------HhC-CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhc
Confidence 8888766532 112 588999999998 59999999999999 9999998543221
Q ss_pred HHH--HhhcCce---ecCHHHHhccCcEEEEcC--C----C---------CCCcCHHHHhcCCCCeEEEEcCCCCccccH
Q psy7896 384 ALQ--ASMEGYE---VTTMEEAAKEGGIFVTTT--G----C---------KDIIRGEHFLQMRDDAIVCNIGHFDCEIQV 443 (718)
Q Consensus 384 al~--a~~~G~~---v~~Leell~~aDiIi~at--g----t---------~~lI~~e~l~~MK~gAiLIN~GRgd~Eid~ 443 (718)
... ....|.. ..+++|+++.+|+|.+.. . . ..-+|.+.++.+|+++++.-++--+.||+.
T Consensus 189 ~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lPrg~EI~~ 268 (299)
T 1pg5_A 189 ARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPLPRVNEIDR 268 (299)
T ss_dssp CCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCSCCSSSBCG
T ss_pred CCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccccccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCCCCCCccCH
Confidence 111 1223433 357999999999999741 1 1 345899999999999999999865567775
Q ss_pred HHHh
Q psy7896 444 SWLD 447 (718)
Q Consensus 444 ~aL~ 447 (718)
+-+.
T Consensus 269 eV~d 272 (299)
T 1pg5_A 269 KVDK 272 (299)
T ss_dssp GGGG
T ss_pred HHhC
Confidence 5443
No 182
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=97.01 E-value=0.0021 Score=72.14 Aligned_cols=90 Identities=16% Similarity=-0.017 Sum_probs=64.8
Q ss_pred CcEEEEEecChhHHHHHHHHHhC-CC-EEEEEecCCc----cHHHHhh---------------------cC-ceecCHHH
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLF-GS-RVIVTEIDPI----NALQASM---------------------EG-YEVTTMEE 399 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~f-Ga-~Viv~d~dp~----~al~a~~---------------------~G-~~v~~Lee 399 (718)
-++|+|||.|.+|..+|..+... |. +|+++|+++. +...... .| ..+.+-.+
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~e 97 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFS 97 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcHH
Confidence 36899999999999999999999 99 9999999987 4221111 12 22322267
Q ss_pred HhccCcEEEEcCCCCCC------------c--CHHHHhcCCCCeEEEEcCCC
Q psy7896 400 AAKEGGIFVTTTGCKDI------------I--RGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 400 ll~~aDiIi~atgt~~l------------I--~~e~l~~MK~gAiLIN~GRg 437 (718)
++++||+|+++.++..- . .......|++|.++|+.+-.
T Consensus 98 a~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv 149 (478)
T 3g79_A 98 RISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTI 149 (478)
T ss_dssp GGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCC
T ss_pred HHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCC
Confidence 88999999998665421 1 12334679999999998754
No 183
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.99 E-value=0.0019 Score=68.54 Aligned_cols=94 Identities=16% Similarity=0.155 Sum_probs=61.4
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecC---CccHHHHh-----hcCc--ee---cCH---HHHhccCc
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEID---PINALQAS-----MEGY--EV---TTM---EEAAKEGG 405 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~d---p~~al~a~-----~~G~--~v---~~L---eell~~aD 405 (718)
+..++||++.|+|.|.+|++++..|...|+ +|++++++ +.++.+.. ..+. .. .++ .+.++++|
T Consensus 143 ~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~D 222 (312)
T 3t4e_A 143 GFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASAD 222 (312)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCS
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCce
Confidence 456789999999999999999999999999 89999988 43332211 1121 12 233 45678999
Q ss_pred EEEEcCCCCCCc--CHH----HHhcCCCCeEEEEcCCC
Q psy7896 406 IFVTTTGCKDII--RGE----HFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 406 iIi~atgt~~lI--~~e----~l~~MK~gAiLIN~GRg 437 (718)
+||.+|+- ++- +.. ..+.++++.+++++-..
T Consensus 223 iIINaTp~-Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~ 259 (312)
T 3t4e_A 223 ILTNGTKV-GMKPLENESLIGDVSLLRPELLVTECVYN 259 (312)
T ss_dssp EEEECSST-TSTTSTTCCSCCCGGGSCTTCEEEECCCS
T ss_pred EEEECCcC-CCCCCCCCcccCCHHHcCCCCEEEEeccC
Confidence 99988653 120 000 12345566666665543
No 184
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.98 E-value=0.0022 Score=71.13 Aligned_cols=84 Identities=20% Similarity=0.351 Sum_probs=60.7
Q ss_pred hcccccCcEEEEEecChhHHHHHHHHHhCCCEEE-EEecC----------CccHHHHh-hcC-------ceecCHHHHhc
Q psy7896 342 LDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVI-VTEID----------PINALQAS-MEG-------YEVTTMEEAAK 402 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Vi-v~d~d----------p~~al~a~-~~G-------~~v~~Leell~ 402 (718)
.|.+++|++|.|.|+|++|+.+|+.|..+|++|+ +.|.+ +....+.. ..| ....+-++++.
T Consensus 229 ~g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~ 308 (440)
T 3aog_A 229 IGLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWG 308 (440)
T ss_dssp HTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTT
T ss_pred cCCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhc
Confidence 4778999999999999999999999999999988 55542 11111111 111 24456667764
Q ss_pred -cCcEEEEcCCCCCCcCHHHHhcCC
Q psy7896 403 -EGGIFVTTTGCKDIIRGEHFLQMR 426 (718)
Q Consensus 403 -~aDiIi~atgt~~lI~~e~l~~MK 426 (718)
.+||++.|+. .+.|+.+....++
T Consensus 309 ~~~DIlvPcA~-~n~i~~~na~~l~ 332 (440)
T 3aog_A 309 LPVEFLVPAAL-EKQITEQNAWRIR 332 (440)
T ss_dssp CCCSEEEECSS-SSCBCTTTGGGCC
T ss_pred CCCcEEEecCC-cCccchhhHHHcC
Confidence 7999998754 4688888888884
No 185
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=96.97 E-value=0.00051 Score=73.35 Aligned_cols=94 Identities=14% Similarity=0.157 Sum_probs=68.2
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC---ccHHHHhhcCceecC---HHHHh----ccCcEEEEcCCCC
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP---INALQASMEGYEVTT---MEEAA----KEGGIFVTTTGCK 414 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp---~~al~a~~~G~~v~~---Leell----~~aDiIi~atgt~ 414 (718)
.+.|++|.|+|.|.||..+++.++.+|++|+++++++ .+...+...|...++ +.+.+ ...|+++.+++..
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 257 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD 257 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh
Confidence 3559999999999999999999999999999999877 543223333443221 11222 3479999988875
Q ss_pred CCcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 415 DIIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 415 ~lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
..+....++.|+++..++++|...
T Consensus 258 ~~~~~~~~~~l~~~G~iv~~g~~~ 281 (366)
T 2cdc_A 258 VNILGNVIPLLGRNGVLGLFGFST 281 (366)
T ss_dssp THHHHHHGGGEEEEEEEEECSCCC
T ss_pred HHHHHHHHHHHhcCCEEEEEecCC
Confidence 433146788999999999998753
No 186
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=96.97 E-value=0.00025 Score=75.67 Aligned_cols=88 Identities=16% Similarity=0.087 Sum_probs=61.7
Q ss_pred EEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhc--------------Ccee-cCHHHHhccCcEEEEcCCCC
Q psy7896 350 VAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASME--------------GYEV-TTMEEAAKEGGIFVTTTGCK 414 (718)
Q Consensus 350 tVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~--------------G~~v-~~Leell~~aDiIi~atgt~ 414 (718)
+|+|||.|.+|..+|..|...|.+|+++++++......... +... .+++++++.+|+|+++....
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~~ 96 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQ 96 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCChH
Confidence 89999999999999999999999999999887543222111 2222 46888899999999987643
Q ss_pred CC---cCHH---HHhcCCC-CeEEEEcCCC
Q psy7896 415 DI---IRGE---HFLQMRD-DAIVCNIGHF 437 (718)
Q Consensus 415 ~l---I~~e---~l~~MK~-gAiLIN~GRg 437 (718)
.+ +... ....+++ +.+++++..+
T Consensus 97 ~~~~v~~~~~~gl~~~l~~~~~ivv~~~~g 126 (366)
T 1evy_A 97 FLRGFFEKSGGNLIAYAKEKQVPVLVCTKG 126 (366)
T ss_dssp HHHHHHHHHCHHHHHHHHHHTCCEEECCCS
T ss_pred HHHHHHHHhHHHHHHhcCccCCEEEEECCc
Confidence 21 1110 2233566 8888888654
No 187
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=96.97 E-value=0.01 Score=63.71 Aligned_cols=175 Identities=13% Similarity=0.073 Sum_probs=116.1
Q ss_pred ccceEEEecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhh
Q psy7896 229 LGVPAINVNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA 308 (718)
Q Consensus 229 l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~A 308 (718)
|+-=++..+.+.+ ..|-+||+.|...--.. + .. +.|+. ++---.+...++--+++|++...+...=.|+
T Consensus 69 LGg~~i~l~~~~s------s~~kgEsl~DTarvLs~-~--~D-~IviR-~~~~~~~~~lA~~~~vPVINa~~~~~HPtQ~ 137 (333)
T 1duv_G 69 QGARVTYLGPSGS------QIGHKESIKDTARVLGR-M--YD-GIQYR-GYGQEIVETLAEYASVPVWNGLTNEFHPTQL 137 (333)
T ss_dssp TTCEEEEECSSSS------CBTTTBCHHHHHHHHTT-T--CS-EEEEE-CSCHHHHHHHHHHHSSCEEESCCSSCCHHHH
T ss_pred cCCeEEEECCccc------cCcCCCcHHHHHHHHHH-h--CC-EEEEE-cCCchHHHHHHHhCCCCeEcCCCCCCCchHH
Confidence 4445566654322 23677999887654222 2 22 33443 2333334444555679999987776666777
Q ss_pred hhhhhhhhHHHHHHHHHHhcccccccchhhhhh-hcccccCcEEEEEecC--hhHHHHHHHHHhCCCEEEEEecCCc---
Q psy7896 309 SMEGYELDEEVAALHLEHLGVKLTKLTEDQAKY-LDIMLAGKVAVVAGYG--DVGKGCAQSLRLFGSRVIVTEIDPI--- 382 (718)
Q Consensus 309 vaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~-~g~eL~GktVGIIG~G--~IG~~vA~~l~~fGa~Viv~d~dp~--- 382 (718)
+++-|.+-+ . .|..+.|.+|++||-| +++...+..+..||++|.++-+...
T Consensus 138 LaDl~Ti~e-----------------------~~~g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~ 194 (333)
T 1duv_G 138 LADLLTMQE-----------------------HLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPE 194 (333)
T ss_dssp HHHHHHHHH-----------------------HSTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCC
T ss_pred HHHHHHHHH-----------------------HhcCCCCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCC
Confidence 777665532 1 2436899999999996 9999999999999999999854322
Q ss_pred cHH-H-----HhhcCce---ecCHHHHhccCcEEEEcC----C-------------CCCCcCHHHHhcC-CCCeEEEEcC
Q psy7896 383 NAL-Q-----ASMEGYE---VTTMEEAAKEGGIFVTTT----G-------------CKDIIRGEHFLQM-RDDAIVCNIG 435 (718)
Q Consensus 383 ~al-~-----a~~~G~~---v~~Leell~~aDiIi~at----g-------------t~~lI~~e~l~~M-K~gAiLIN~G 435 (718)
... + +...|.. ..+++++++.+|||.+.. | ...-+|.+.++.+ |+++++.-+.
T Consensus 195 ~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcL 274 (333)
T 1duv_G 195 AALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCL 274 (333)
T ss_dssp HHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECS
T ss_pred HHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeCCccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECCC
Confidence 111 1 1134533 468999999999999831 1 1246899999999 9999999997
Q ss_pred CC
Q psy7896 436 HF 437 (718)
Q Consensus 436 Rg 437 (718)
-.
T Consensus 275 P~ 276 (333)
T 1duv_G 275 PA 276 (333)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 188
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=96.96 E-value=0.014 Score=62.03 Aligned_cols=188 Identities=17% Similarity=0.151 Sum_probs=119.8
Q ss_pred CccceEEEecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhc-CCeEEEeec-Cchhh
Q psy7896 228 KLGVPAINVNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLF-GSRVIVTEI-DPINA 305 (718)
Q Consensus 228 ~l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~-Gv~VtV~D~-dp~r~ 305 (718)
.|+-=++..+++.+- ...|-+||+.|...--.. + . .+.|+....-| .+...++-- +++|++.-. +...=
T Consensus 65 ~LGg~~i~l~~~~~~----S~~~kgEsl~DTarvls~-~--~-D~iviR~~~~~-~~~~la~~~~~vPVINag~G~~~HP 135 (310)
T 3csu_A 65 RLGASVVGFSDSANT----SLGKKGETLADTISVIST-Y--V-DAIVMRHPQEG-AARLATEFSGNVPVLNAGDGSNQHP 135 (310)
T ss_dssp TTTCEEEEESCC---------CCSHHHHHHHHHHHTT-T--C-SEEEEEESSTT-HHHHHHHHCTTCCEEEEEETTSCCH
T ss_pred HhCCeEEEeCCCccc----hhhccCCcHHHHHHHHHH-h--C-CEEEEECCChh-HHHHHHHhcCCCCEEcCccCCCCCc
Confidence 455556666544320 024578999886654222 2 2 34445433322 233334444 699998644 56666
Q ss_pred hhhhhhhhhhhHHHHHHHHHHhcccccccchhhhhhhcccccCcEEEEEecC---hhHHHHHHHHHhC-CCEEEEEecCC
Q psy7896 306 LQASMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGYG---DVGKGCAQSLRLF-GSRVIVTEIDP 381 (718)
Q Consensus 306 v~AvaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~G---~IG~~vA~~l~~f-Ga~Viv~d~dp 381 (718)
.|+.++-|.+-+ ..| .+.|++|++||-| ++.+..+..+..| |++|.++-+..
T Consensus 136 tQaLaDl~Ti~e-----------------------~~g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~ 191 (310)
T 3csu_A 136 TQTLLDLFTIQE-----------------------TQG-RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDA 191 (310)
T ss_dssp HHHHHHHHHHHH-----------------------HHS-CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred hHHHHHHHHHHH-----------------------HhC-CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcc
Confidence 677777665532 112 5889999999984 8999999999999 99999985432
Q ss_pred cc---HH--HHhhcCce---ecCHHHHhccCcEEEEcC---C-----C------CCCcCHHHHhcCCCCeEEEEcCCCCc
Q psy7896 382 IN---AL--QASMEGYE---VTTMEEAAKEGGIFVTTT---G-----C------KDIIRGEHFLQMRDDAIVCNIGHFDC 439 (718)
Q Consensus 382 ~~---al--~a~~~G~~---v~~Leell~~aDiIi~at---g-----t------~~lI~~e~l~~MK~gAiLIN~GRgd~ 439 (718)
.. .. .+...|.. ..+++|+++.+|+|.+.. . . ..-+|.+.++.+|+++++.-++--..
T Consensus 192 ~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lPrg~ 271 (310)
T 3csu_A 192 LAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVD 271 (310)
T ss_dssp GCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-----------------CCBCGGGGTTCCTTCEEECCSCCSS
T ss_pred cccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCccccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCCCCCC
Confidence 21 11 11123533 257999999999999751 1 0 24589999999999999999987567
Q ss_pred cccHHHHhc
Q psy7896 440 EIQVSWLDK 448 (718)
Q Consensus 440 Eid~~aL~~ 448 (718)
||+.+-+..
T Consensus 272 EI~~eV~d~ 280 (310)
T 3csu_A 272 EIATDVDKT 280 (310)
T ss_dssp SBCHHHHTS
T ss_pred eecHHHhCC
Confidence 888665543
No 189
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.95 E-value=0.0014 Score=69.78 Aligned_cols=91 Identities=14% Similarity=0.097 Sum_probs=68.4
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-ec------CHHHHh-ccCcEEEEcCCC--CCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-VT------TMEEAA-KEGGIFVTTTGC--KDI 416 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v~------~Leell-~~aDiIi~atgt--~~l 416 (718)
.|++|.|+|.|.||..+++.++.+|++|++++.++.+...+...|.. +. ++.+.+ ...|+++.+++. ...
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~ 258 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDID 258 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCcHHH
Confidence 68999999999999999999999999999999877654333334532 11 222223 367999988876 444
Q ss_pred cCHHHHhcCCCCeEEEEcCCCC
Q psy7896 417 IRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 417 I~~e~l~~MK~gAiLIN~GRgd 438 (718)
+. ..++.|+++..++.+|...
T Consensus 259 ~~-~~~~~l~~~G~iv~~g~~~ 279 (360)
T 1piw_A 259 FN-IMPKAMKVGGRIVSISIPE 279 (360)
T ss_dssp TT-TGGGGEEEEEEEEECCCCC
T ss_pred HH-HHHHHhcCCCEEEEecCCC
Confidence 44 5688999999999998754
No 190
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=96.94 E-value=0.00076 Score=75.66 Aligned_cols=89 Identities=17% Similarity=0.218 Sum_probs=63.0
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHh-----------hcCc-------------e-ecCHHHHhc
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQAS-----------MEGY-------------E-VTTMEEAAK 402 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~-----------~~G~-------------~-v~~Leell~ 402 (718)
-++|+|||.|.+|..+|..+...|.+|+++|+++.....+. ..|. . ..++ +.++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDI-HALA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCG-GGGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCH-HHhc
Confidence 36899999999999999999999999999999886432211 1221 1 2345 4688
Q ss_pred cCcEEEEcCCCCC----CcCHHHHhcCCCCeEE-EEcCCC
Q psy7896 403 EGGIFVTTTGCKD----IIRGEHFLQMRDDAIV-CNIGHF 437 (718)
Q Consensus 403 ~aDiIi~atgt~~----lI~~e~l~~MK~gAiL-IN~GRg 437 (718)
+||+|+.+....- -+-.+..+.++++++| .|++..
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti 123 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSI 123 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCC
Confidence 9999999865421 1223344568999998 577764
No 191
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.94 E-value=0.001 Score=70.34 Aligned_cols=92 Identities=16% Similarity=0.154 Sum_probs=70.4
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee--cCHHHHhccCcEEEEcCCCCCCcCHHHHh
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV--TTMEEAAKEGGIFVTTTGCKDIIRGEHFL 423 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v--~~Leell~~aDiIi~atgt~~lI~~e~l~ 423 (718)
-.|++|.|+|.|.||..+++.++.+|++|++++.++.+...+...|... .+.+++.+..|+++.+.+....+ ...++
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~~-~~~~~ 253 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYDL-KDYLK 253 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCCH-HHHHT
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHHH-HHHHH
Confidence 3689999999999999999999999999999998887654444455432 12233333689999888875443 46788
Q ss_pred cCCCCeEEEEcCCCC
Q psy7896 424 QMRDDAIVCNIGHFD 438 (718)
Q Consensus 424 ~MK~gAiLIN~GRgd 438 (718)
.++++..++.+|...
T Consensus 254 ~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 254 LLTYNGDLALVGLPP 268 (348)
T ss_dssp TEEEEEEEEECCCCC
T ss_pred HHhcCCEEEEECCCC
Confidence 999999999998754
No 192
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=96.93 E-value=0.0011 Score=74.14 Aligned_cols=87 Identities=11% Similarity=0.072 Sum_probs=62.1
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHH--------HHhhcCc-------------e-ecCHHHHhccCcE
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINAL--------QASMEGY-------------E-VTTMEEAAKEGGI 406 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al--------~a~~~G~-------------~-v~~Leell~~aDi 406 (718)
++|+|||.|.+|..+|..+...|.+|+++|+++.+.. .....|. . ..+++ .+++||+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDl 133 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDL 133 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCE
Confidence 7899999999999999999999999999999886321 1112221 1 34564 6889999
Q ss_pred EEEcCCCCC----CcCHHHHhcCCCCeEEE-EcCC
Q psy7896 407 FVTTTGCKD----IIRGEHFLQMRDDAIVC-NIGH 436 (718)
Q Consensus 407 Ii~atgt~~----lI~~e~l~~MK~gAiLI-N~GR 436 (718)
||.+....- .+-++..+.++++++|+ |++.
T Consensus 134 VIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSs 168 (460)
T 3k6j_A 134 IVESVIEDMKLKKELFANLENICKSTCIFGTNTSS 168 (460)
T ss_dssp EEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS
T ss_pred EEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCC
Confidence 999865421 12233445789999996 6654
No 193
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=96.90 E-value=0.00023 Score=73.39 Aligned_cols=86 Identities=15% Similarity=0.135 Sum_probs=55.8
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEE-EEEecCCccHHHHh-hcCceecCHHHHhccCcEEEEcCCCCCCcCHHHHhcC-
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRV-IVTEIDPINALQAS-MEGYEVTTMEEAAKEGGIFVTTTGCKDIIRGEHFLQM- 425 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~V-iv~d~dp~~al~a~-~~G~~v~~Leell~~aDiIi~atgt~~lI~~e~l~~M- 425 (718)
++|||||+|++|..+++.+... .+| .++++++.+..... ..|....+++++++++|+|++++....+ .+.+..+
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~DvVilav~~~~~--~~v~~~l~ 79 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDRYI--KTVANHLN 79 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCTTTH--HHHHTTTC
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCCccCCHHHHHhcCCEEEEeCChHHH--HHHHHHhc
Confidence 4799999999999999998766 788 48988876443322 2233334677788899999998766432 4555555
Q ss_pred CCCeEEEEcCCC
Q psy7896 426 RDDAIVCNIGHF 437 (718)
Q Consensus 426 K~gAiLIN~GRg 437 (718)
+++.+++|++-+
T Consensus 80 ~~~~ivi~~s~~ 91 (276)
T 2i76_A 80 LGDAVLVHCSGF 91 (276)
T ss_dssp CSSCCEEECCSS
T ss_pred cCCCEEEECCCC
Confidence 588899998754
No 194
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.90 E-value=0.002 Score=71.10 Aligned_cols=94 Identities=22% Similarity=0.326 Sum_probs=65.0
Q ss_pred hcccccCcEEEEEecChhHHHHHHHHHhCCCEEE-EEecC-----C--c--cHHHHh--hcC------ceecCHHHHhc-
Q psy7896 342 LDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVI-VTEID-----P--I--NALQAS--MEG------YEVTTMEEAAK- 402 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Vi-v~d~d-----p--~--~al~a~--~~G------~~v~~Leell~- 402 (718)
.|.+++|+||.|.|+|++|+.+|+.|..+|++|+ +.|.+ | . ..+... ..| .+..+-++++.
T Consensus 215 ~g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~~ 294 (424)
T 3k92_A 215 KGIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLEK 294 (424)
T ss_dssp TTCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHHS
T ss_pred cCCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCccceec
Confidence 4778999999999999999999999999999975 56654 1 1 111111 112 23445667654
Q ss_pred cCcEEEEcCCCCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 403 EGGIFVTTTGCKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 403 ~aDiIi~atgt~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
+|||++.|... +.|+.+....++. -+++-.+.+
T Consensus 295 ~~DIliPcA~~-n~I~~~~a~~l~a-k~V~EgAN~ 327 (424)
T 3k92_A 295 DCDILVPAAIS-NQITAKNAHNIQA-SIVVERANG 327 (424)
T ss_dssp CCSEEEECSCS-SCBCTTTGGGCCC-SEEECCSSS
T ss_pred cccEEeecCcc-cccChhhHhhcCc-eEEEcCCCC
Confidence 79999998654 7899988888843 233333333
No 195
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=96.86 E-value=0.00076 Score=72.40 Aligned_cols=87 Identities=7% Similarity=0.064 Sum_probs=62.0
Q ss_pred cEEEEEecChhHHHHHHHHHhCC-------CEEEEEecCCc-----cHHHHhh--------------cCcee-cCHHHHh
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFG-------SRVIVTEIDPI-----NALQASM--------------EGYEV-TTMEEAA 401 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fG-------a~Viv~d~dp~-----~al~a~~--------------~G~~v-~~Leell 401 (718)
++|+|||.|.+|..+|..|..-| .+|+++++++. ....... .+... .++++++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 57999999999999999998777 89999998876 3321111 12232 3577889
Q ss_pred ccCcEEEEcCCCCCCcCHHH---H-h----cCCCCeEEEEcCCC
Q psy7896 402 KEGGIFVTTTGCKDIIRGEH---F-L----QMRDDAIVCNIGHF 437 (718)
Q Consensus 402 ~~aDiIi~atgt~~lI~~e~---l-~----~MK~gAiLIN~GRg 437 (718)
+.+|+|+++.....+ .+. + . .++++.+++++.-+
T Consensus 102 ~~aDvVilav~~~~~--~~vl~~i~~~~~~~l~~~~ivvs~~~G 143 (375)
T 1yj8_A 102 NDADLLIFIVPCQYL--ESVLASIKESESIKIASHAKAISLTKG 143 (375)
T ss_dssp TTCSEEEECCCHHHH--HHHHHHHTC---CCCCTTCEEEECCCS
T ss_pred cCCCEEEEcCCHHHH--HHHHHHHhhhhhccCCCCCEEEEeCCc
Confidence 999999998765321 122 2 3 56778999988654
No 196
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.83 E-value=0.0014 Score=70.29 Aligned_cols=91 Identities=18% Similarity=0.222 Sum_probs=67.8
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-ec---C---HHHHhccCcEEEEcCCCCCCcCH
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-VT---T---MEEAAKEGGIFVTTTGCKDIIRG 419 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v~---~---Leell~~aDiIi~atgt~~lI~~ 419 (718)
.|.+|.|+|.|.||..+++.++.+|++|++++.++.+...+...|.. +. + .+++....|+++.+++....+ .
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~~-~ 272 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNL-D 272 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCCH-H
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHHH-H
Confidence 58999999999999999999999999999998877654333334542 11 1 222334679999888765443 3
Q ss_pred HHHhcCCCCeEEEEcCCCC
Q psy7896 420 EHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 420 e~l~~MK~gAiLIN~GRgd 438 (718)
..++.|+++..++.+|...
T Consensus 273 ~~~~~l~~~G~iv~~G~~~ 291 (369)
T 1uuf_A 273 DFTTLLKRDGTMTLVGAPA 291 (369)
T ss_dssp HHHTTEEEEEEEEECCCC-
T ss_pred HHHHHhccCCEEEEeccCC
Confidence 5788999999999998753
No 197
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.81 E-value=0.001 Score=73.15 Aligned_cols=102 Identities=18% Similarity=0.198 Sum_probs=69.3
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec-----C---HHHH-hccCcEEEEcCCCC--CC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT-----T---MEEA-AKEGGIFVTTTGCK--DI 416 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~-----~---Leel-l~~aDiIi~atgt~--~l 416 (718)
+.+|.|+|+|++|+.+++.|+..|.+|+++|.||.....+...|+.+. + |+++ +.++|+|++++++. ++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 467999999999999999999999999999999976544445565432 2 3344 67899999987753 22
Q ss_pred cCHHHHhcCCCCeEEEEcCCCCccccHHHHhcccc
Q psy7896 417 IRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDKNAV 451 (718)
Q Consensus 417 I~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l 451 (718)
.-......+.+...++--.+. .-....|...+.
T Consensus 84 ~i~~~ar~~~p~~~Iiara~~--~~~~~~L~~~Ga 116 (413)
T 3l9w_A 84 QLTEMVKEHFPHLQIIARARD--VDHYIRLRQAGV 116 (413)
T ss_dssp HHHHHHHHHCTTCEEEEEESS--HHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCeEEEEECC--HHHHHHHHHCCC
Confidence 333445666777666654443 223344544443
No 198
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=96.81 E-value=0.0043 Score=68.71 Aligned_cols=91 Identities=12% Similarity=0.157 Sum_probs=63.1
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce---ecCHHHH---------------hccCcEE
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE---VTTMEEA---------------AKEGGIF 407 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~---v~~Leel---------------l~~aDiI 407 (718)
-+|.++.|||+|.+|..+|..|...|.+|+++|+++.+.... ..|.. -..++|+ +++||+|
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L-~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvv 87 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKL-QNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVF 87 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEE
Confidence 468899999999999999999999999999999998654322 22211 1123333 3579999
Q ss_pred EEcCCCCCCcC--------------HHHHhcCCCCeEEEEcCCC
Q psy7896 408 VTTTGCKDIIR--------------GEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 408 i~atgt~~lI~--------------~e~l~~MK~gAiLIN~GRg 437 (718)
+++.+|..-.+ ....+.|++|.++|+.+-.
T Consensus 88 ii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV 131 (431)
T 3ojo_A 88 IIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTI 131 (431)
T ss_dssp EECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCC
T ss_pred EEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 99866643111 2234579999999998754
No 199
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=96.81 E-value=0.0047 Score=68.12 Aligned_cols=84 Identities=25% Similarity=0.323 Sum_probs=60.7
Q ss_pred hcccccCcEEEEEecChhHHHHHHHHHh-CCCEEE-EEec----------CCccHHHHh-hcC-------ceecCHHHHh
Q psy7896 342 LDIMLAGKVAVVAGYGDVGKGCAQSLRL-FGSRVI-VTEI----------DPINALQAS-MEG-------YEVTTMEEAA 401 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~IG~~vA~~l~~-fGa~Vi-v~d~----------dp~~al~a~-~~G-------~~v~~Leell 401 (718)
.|.+++|++|.|.|+|++|+.+|+.|.. .|++|+ +.|. |+....+.. ..| ....+.++++
T Consensus 203 ~g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil 282 (415)
T 2tmg_A 203 LGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELL 282 (415)
T ss_dssp TTCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHT
T ss_pred cCCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhh
Confidence 5778999999999999999999999998 999988 5554 222111111 111 2344667776
Q ss_pred c-cCcEEEEcCCCCCCcCHHHHhcCC
Q psy7896 402 K-EGGIFVTTTGCKDIIRGEHFLQMR 426 (718)
Q Consensus 402 ~-~aDiIi~atgt~~lI~~e~l~~MK 426 (718)
. .+|+++.|+. .+.|+.+....++
T Consensus 283 ~~~~DIliP~A~-~n~i~~~~a~~l~ 307 (415)
T 2tmg_A 283 ELDVDILVPAAL-EGAIHAGNAERIK 307 (415)
T ss_dssp TCSCSEEEECSS-TTSBCHHHHTTCC
T ss_pred cCCCcEEEecCC-cCccCcccHHHcC
Confidence 4 7999998753 3578998888884
No 200
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=96.80 E-value=0.0014 Score=65.86 Aligned_cols=81 Identities=15% Similarity=0.149 Sum_probs=59.9
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEE-EEEecCCccHHHHhhcCceecCHHHHh-ccCcEEEEcCCCCCCcCHHHHhcCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRV-IVTEIDPINALQASMEGYEVTTMEEAA-KEGGIFVTTTGCKDIIRGEHFLQMR 426 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~V-iv~d~dp~~al~a~~~G~~v~~Leell-~~aDiIi~atgt~~lI~~e~l~~MK 426 (718)
.+|||||+|++|+.+++.+..-|.++ .++|+++. .. . .+.++++++ .++|+|+.++++. ..-+.....++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~-~~----~--~~~~~~~l~~~~~DvVv~~~~~~-~~~~~~~~~l~ 72 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGE-HE----K--MVRGIDEFLQREMDVAVEAASQQ-AVKDYAEKILK 72 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-CT----T--EESSHHHHTTSCCSEEEECSCHH-HHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcc-hh----h--hcCCHHHHhcCCCCEEEECCCHH-HHHHHHHHHHH
Confidence 37999999999999999998889987 58887752 11 1 456799999 6899999998764 22222345677
Q ss_pred CCeEEEEcCCC
Q psy7896 427 DDAIVCNIGHF 437 (718)
Q Consensus 427 ~gAiLIN~GRg 437 (718)
.|..++...-+
T Consensus 73 ~G~~vv~~~~~ 83 (236)
T 2dc1_A 73 AGIDLIVLSTG 83 (236)
T ss_dssp TTCEEEESCGG
T ss_pred CCCcEEEECcc
Confidence 88877776543
No 201
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.79 E-value=0.0022 Score=71.27 Aligned_cols=96 Identities=16% Similarity=0.132 Sum_probs=65.7
Q ss_pred hcccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEe--------cCCcc--HHHH----------------hhcCceec
Q psy7896 342 LDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTE--------IDPIN--ALQA----------------SMEGYEVT 395 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d--------~dp~~--al~a----------------~~~G~~v~ 395 (718)
.+.++.||||.|-|+|++|+.+|+.|..+|++|+.++ .+... .+.. ...|..+.
T Consensus 229 ~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~ 308 (450)
T 4fcc_A 229 HGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYL 308 (450)
T ss_dssp TTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEE
T ss_pred cCCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEe
Confidence 4678999999999999999999999999999988743 22111 0000 01133333
Q ss_pred CHHHHhc-cCcEEEEcCCCCCCcCHHHHhcCCCC--eEEEEcCCCC
Q psy7896 396 TMEEAAK-EGGIFVTTTGCKDIIRGEHFLQMRDD--AIVCNIGHFD 438 (718)
Q Consensus 396 ~Leell~-~aDiIi~atgt~~lI~~e~l~~MK~g--AiLIN~GRgd 438 (718)
+-++++. .|||++.|... +.|+.+...+++.+ .++++.+...
T Consensus 309 ~~~~i~~~~~DI~iPcAl~-~~I~~~~a~~L~a~g~k~IaEgAN~p 353 (450)
T 4fcc_A 309 EGQQPWSVPVDIALPCATQ-NELDVDAAHQLIANGVKAVAEGANMP 353 (450)
T ss_dssp ETCCGGGSCCSEEEECSCT-TCBCHHHHHHHHHTTCCEEECCSSSC
T ss_pred cCcccccCCccEEeecccc-ccccHHHHHHHHhcCceEEecCCCCC
Confidence 3344433 79999987432 57999999988754 4666666554
No 202
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=96.79 E-value=0.012 Score=62.42 Aligned_cols=167 Identities=16% Similarity=0.145 Sum_probs=107.9
Q ss_pred ccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEe-ecCchhhhhhhhhhhhhhHHHHHHHHHHh
Q psy7896 249 YGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVT-EIDPINALQASMEGYELDEEVAALHLEHL 327 (718)
Q Consensus 249 ~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~-D~dp~r~v~AvaeGf~L~r~i~~~~l~~l 327 (718)
.|-+||+-|...--. .-|--+.|+....-| .+...++--+++|++. |.+...=.|+.++-|.+.+
T Consensus 75 ~~kgEsl~DTarvLs---~~~~D~iviR~~~~~-~~~~la~~~~vPVINagdg~~~HPtQaLaDl~Ti~e---------- 140 (304)
T 3r7f_A 75 VQKGETLYDTIRTLE---SIGVDVCVIRHSEDE-YYEELVSQVNIPILNAGDGCGQHPTQSLLDLMTIYE---------- 140 (304)
T ss_dssp SCSSSCHHHHHHHHH---HHTCCEEEEECSSTT-CHHHHHHHCSSCEEESCCTTSCCHHHHHHHHHHHHH----------
T ss_pred CCCCCCHHHHHHHHH---HhcCCEEEEecCChh-HHHHHHHhCCCCEEeCCCCCCcCcHHHHHHHHHHHH----------
Confidence 456788877654311 122234444433222 2333445667899887 4455555666666655432
Q ss_pred cccccccchhhhhhhcccccCcEEEEEecC---hhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccC
Q psy7896 328 GVKLTKLTEDQAKYLDIMLAGKVAVVAGYG---DVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEG 404 (718)
Q Consensus 328 gv~~~~~~~~~~~~~g~eL~GktVGIIG~G---~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~a 404 (718)
..| .+.|++|++||-| ++....+..+..||++|.++-+..... +....| ...+++|+++.+
T Consensus 141 -------------~~g-~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~-~~~~~g-~~~d~~eav~~a 204 (304)
T 3r7f_A 141 -------------EFN-TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQD-EENTFG-TYVSMDEAVESS 204 (304)
T ss_dssp -------------HHS-CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSC-TTCSSC-EECCHHHHHHHC
T ss_pred -------------HhC-CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCc-chhhcC-ccCCHHHHhCCC
Confidence 112 4889999999985 699999999999999999985422221 111223 456899999999
Q ss_pred cEEEEcCC---------C------CCCcCHHHHhcCCCCeEEEEcCCC--CccccHHH
Q psy7896 405 GIFVTTTG---------C------KDIIRGEHFLQMRDDAIVCNIGHF--DCEIQVSW 445 (718)
Q Consensus 405 DiIi~atg---------t------~~lI~~e~l~~MK~gAiLIN~GRg--d~Eid~~a 445 (718)
|+|.+... . ..-++.+.++.+|+++++.-+.-. +.||+.+-
T Consensus 205 Dvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mHclP~~Rg~EI~~eV 262 (304)
T 3r7f_A 205 DVVMLLRIQNERHQSAVSQEGYLNKYGLTVERAERMKRHAIIMHPAPVNRGVEIDDSL 262 (304)
T ss_dssp SEEEECCCCTTTCCSSCCSTTHHHHHSBCHHHHTTSCTTCEEECCSCCCBTTTBCGGG
T ss_pred CEEEeccchhhccccchhHHHHhCCCccCHHHHhhcCCCCEEECCCCCCCCceeCHHH
Confidence 99998421 0 123899999999999999999742 24676443
No 203
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=96.79 E-value=0.0016 Score=72.73 Aligned_cols=88 Identities=13% Similarity=0.082 Sum_probs=62.5
Q ss_pred cEEEEEecChhHHHHHHHHHhC--CCEEEEEecCCccHHHHhh-------------------cCcee-cCHHHHhccCcE
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLF--GSRVIVTEIDPINALQASM-------------------EGYEV-TTMEEAAKEGGI 406 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~f--Ga~Viv~d~dp~~al~a~~-------------------~G~~v-~~Leell~~aDi 406 (718)
++|+|||+|.+|..+|..|... |.+|+++|+++.+...... .+..+ .++.++++++|+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 5899999999999999999776 7899999988764322211 02222 356788899999
Q ss_pred EEEcCCCCC---------CcC--------HHHHhcCCCCeEEEEcCC
Q psy7896 407 FVTTTGCKD---------IIR--------GEHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 407 Ii~atgt~~---------lI~--------~e~l~~MK~gAiLIN~GR 436 (718)
|+++.++.- -.+ ......++++.++|+.+-
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~ST 136 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKST 136 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred EEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 999855431 111 122356899999999764
No 204
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=96.78 E-value=0.003 Score=64.51 Aligned_cols=68 Identities=13% Similarity=0.070 Sum_probs=49.3
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcCCCCCC--cCHHHHhcC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCKDI--IRGEHFLQM 425 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~~l--I~~e~l~~M 425 (718)
-++|+|||.|.||..+|+.|+..|.+|+++++. ++ ++.+| |+..+.. .+ +-.+....+
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~-----------------~~-~~~aD-ilavP~~-ai~~vl~~l~~~l 65 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP-----------------ED-IRDFE-LVVIDAH-GVEGYVEKLSAFA 65 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG-----------------GG-GGGCS-EEEECSS-CHHHHHHHHHTTC
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH-----------------HH-hccCC-EEEEcHH-HHHHHHHHHHHhc
Confidence 368999999999999999999999999998651 12 45789 4443332 22 112333467
Q ss_pred CCCeEEEEcC
Q psy7896 426 RDDAIVCNIG 435 (718)
Q Consensus 426 K~gAiLIN~G 435 (718)
++++++++++
T Consensus 66 ~~g~ivvd~s 75 (232)
T 3dfu_A 66 RRGQMFLHTS 75 (232)
T ss_dssp CTTCEEEECC
T ss_pred CCCCEEEEEC
Confidence 9999999974
No 205
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=96.76 E-value=0.001 Score=68.80 Aligned_cols=86 Identities=15% Similarity=0.044 Sum_probs=60.1
Q ss_pred cEEEEEecChhHHHHHHHHHhC-----C-CEEEEEecCCccHHHHhh-cCceec--------------CHHHHhccCcEE
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLF-----G-SRVIVTEIDPINALQASM-EGYEVT--------------TMEEAAKEGGIF 407 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~f-----G-a~Viv~d~dp~~al~a~~-~G~~v~--------------~Leell~~aDiI 407 (718)
++|+|||.|.+|..+|..|..- | .+|+++++ +.+...... .|..+. +..+.++.+|+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 87 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYI 87 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEE
Confidence 5899999999999999999877 8 89999987 533222223 455432 233567889999
Q ss_pred EEcCCCCCCcCHHHHh----cCCCCeEEEEcCCC
Q psy7896 408 VTTTGCKDIIRGEHFL----QMRDDAIVCNIGHF 437 (718)
Q Consensus 408 i~atgt~~lI~~e~l~----~MK~gAiLIN~GRg 437 (718)
++++.+..+ .+.++ .++++.+++.+.-|
T Consensus 88 il~vk~~~~--~~v~~~i~~~l~~~~~iv~~~nG 119 (317)
T 2qyt_A 88 LFCTKDYDM--ERGVAEIRPMIGQNTKILPLLNG 119 (317)
T ss_dssp EECCSSSCH--HHHHHHHGGGEEEEEEEEECSCS
T ss_pred EEecCcccH--HHHHHHHHhhcCCCCEEEEccCC
Confidence 999776553 33333 45667888887554
No 206
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=96.74 E-value=0.0018 Score=68.98 Aligned_cols=91 Identities=16% Similarity=0.169 Sum_probs=68.0
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHh-hcCce-e---cCHH---HHhccCcEEEEcCCCCCCcC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQAS-MEGYE-V---TTME---EAAKEGGIFVTTTGCKDIIR 418 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~-~~G~~-v---~~Le---ell~~aDiIi~atgt~~lI~ 418 (718)
.|++|.|+|.|.||..+++.++.+|++|++++.++.+...+. ..|.. + .+.+ ++....|+++-++|....+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~~~- 258 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHAL- 258 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCCCS-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChHHH-
Confidence 689999999999999999999999999999998776543333 44542 1 1222 2233579999888764333
Q ss_pred HHHHhcCCCCeEEEEcCCCC
Q psy7896 419 GEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 419 ~e~l~~MK~gAiLIN~GRgd 438 (718)
...++.++++..++.+|...
T Consensus 259 ~~~~~~l~~~G~iv~~G~~~ 278 (357)
T 2cf5_A 259 EPYLSLLKLDGKLILMGVIN 278 (357)
T ss_dssp HHHHTTEEEEEEEEECSCCS
T ss_pred HHHHHHhccCCEEEEeCCCC
Confidence 46788999999999998653
No 207
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=96.71 E-value=0.021 Score=60.54 Aligned_cols=185 Identities=15% Similarity=0.115 Sum_probs=119.0
Q ss_pred ccceEEEecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeec-Cchhhhh
Q psy7896 229 LGVPAINVNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEI-DPINALQ 307 (718)
Q Consensus 229 l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~-dp~r~v~ 307 (718)
|+--++..+++.. ...|-+||+.|...--.. + . -+.|+....-| .+...++--+++|++.-. +...=.|
T Consensus 69 LGg~~i~l~~~~~-----s~~~kgEsl~DTarvls~-~--~-D~iviR~~~~~-~~~~la~~~~vPVINag~g~~~HPtQ 138 (308)
T 1ml4_A 69 LGGAVIGFAEAST-----SSVKKGESLRDTIKTVEQ-Y--C-DVIVIRHPKEG-AARLAAEVAEVPVINAGDGSNQHPTQ 138 (308)
T ss_dssp TTCEEEEESCGGG-----SGGGGTCCHHHHHHHHTT-T--C-SEEEEEESSTT-HHHHHHHTCSSCEEEEEETTSCCHHH
T ss_pred hCCeEEEeCCCcc-----ccccCCCCHHHHHHHHHH-h--C-cEEEEecCChh-HHHHHHHhCCCCEEeCccCCccCcHH
Confidence 4445666654431 124567998886654322 2 2 34455433322 233344555689998644 5566667
Q ss_pred hhhhhhhhhHHHHHHHHHHhcccccccchhhhhhhcccccCcEEEEEecC---hhHHHHHHHHHhCCCEEEEEecCCcc-
Q psy7896 308 ASMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGYG---DVGKGCAQSLRLFGSRVIVTEIDPIN- 383 (718)
Q Consensus 308 AvaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~G---~IG~~vA~~l~~fGa~Viv~d~dp~~- 383 (718)
+.++-|.+-+ ..| .+.|++|++||=| ++....+..+..||++|.++-+....
T Consensus 139 ~LaDl~Ti~e-----------------------~~g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~ 194 (308)
T 1ml4_A 139 TLLDLYTIKK-----------------------EFG-RIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRM 194 (308)
T ss_dssp HHHHHHHHHH-----------------------HSS-CSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCC
T ss_pred HHHHHHHHHH-----------------------HhC-CCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccC
Confidence 7777665432 112 5889999999985 89999999999999999998543221
Q ss_pred --HH--HHhhcCce---ecCHHHHhccCcEEEEcC------C---------CCCCcCHHHHhcCCCCeEEEEcCCCCccc
Q psy7896 384 --AL--QASMEGYE---VTTMEEAAKEGGIFVTTT------G---------CKDIIRGEHFLQMRDDAIVCNIGHFDCEI 441 (718)
Q Consensus 384 --al--~a~~~G~~---v~~Leell~~aDiIi~at------g---------t~~lI~~e~l~~MK~gAiLIN~GRgd~Ei 441 (718)
.. .+...|.. ..+++|+++.+|+|.+.. + ...-+|.+.++.+|+++++.-++--..||
T Consensus 195 ~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lPrg~EI 274 (308)
T 1ml4_A 195 PRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPLPRVDEI 274 (308)
T ss_dssp CHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCSCCSSSB
T ss_pred CHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCccccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCCCCCCee
Confidence 11 11123533 357999999999999842 1 13458999999999999999998655677
Q ss_pred cHHHHh
Q psy7896 442 QVSWLD 447 (718)
Q Consensus 442 d~~aL~ 447 (718)
+.+-+.
T Consensus 275 ~~eV~d 280 (308)
T 1ml4_A 275 HPEVDN 280 (308)
T ss_dssp CGGGGG
T ss_pred cHHHhC
Confidence 755443
No 208
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=96.70 E-value=0.0026 Score=70.28 Aligned_cols=84 Identities=29% Similarity=0.411 Sum_probs=58.4
Q ss_pred hcccccCcEEEEEecChhHHHHHHHHHhCCCEEE-EEec----------CCccHHHHhh--cCc------------eec-
Q psy7896 342 LDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVI-VTEI----------DPINALQASM--EGY------------EVT- 395 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Vi-v~d~----------dp~~al~a~~--~G~------------~v~- 395 (718)
.|.+++|++|.|.|+|++|+.+|+.|..+|++|+ +.|. |+.. +.... .|. ...
T Consensus 204 ~g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~-l~~~k~~~g~~~v~~y~~~~~~~~~~ 282 (421)
T 1v9l_A 204 LWGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVEL-IQKNKGLTGPALVELFTTKDNAEFVK 282 (421)
T ss_dssp HHSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHH-HHHTTTSCHHHHHHHHHHTSCCCCCS
T ss_pred cCCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHH-HHHHHHhhCCccccccccccCceEeC
Confidence 4678999999999999999999999999999988 5554 2221 11111 111 222
Q ss_pred CHHHHhc-cCcEEEEcCCCCCCcCHHHHhcCCC
Q psy7896 396 TMEEAAK-EGGIFVTTTGCKDIIRGEHFLQMRD 427 (718)
Q Consensus 396 ~Leell~-~aDiIi~atgt~~lI~~e~l~~MK~ 427 (718)
+-++++. .||+++.|. ..+.|+.+....++.
T Consensus 283 ~~~~~~~~~~Dil~P~A-~~~~I~~~~a~~l~a 314 (421)
T 1v9l_A 283 NPDAIFKLDVDIFVPAA-IENVIRGDNAGLVKA 314 (421)
T ss_dssp STTGGGGCCCSEEEECS-CSSCBCTTTTTTCCC
T ss_pred CchhhhcCCccEEEecC-cCCccchhhHHHcCc
Confidence 3355554 789998875 345788877777754
No 209
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=96.69 E-value=0.021 Score=61.77 Aligned_cols=175 Identities=18% Similarity=0.133 Sum_probs=115.9
Q ss_pred CccceEEEecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhh
Q psy7896 228 KLGVPAINVNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQ 307 (718)
Q Consensus 228 ~l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~ 307 (718)
.|+-=++..+.+.+ ..|-+||+.|...--.. + .. +.|+. ++---.+..+++--+++|++...+...=.|
T Consensus 91 ~LGg~vi~l~~~~s------s~~kgEsl~DTarvLs~-~--~D-~IviR-~~~~~~~~~lA~~s~vPVINa~~~~~HPtQ 159 (359)
T 2w37_A 91 DLGAHPEYLGQNDI------QLGKKESTSDTAKVLGS-M--FD-GIEFR-GFKQSDAEILARDSGVPVWNGLTDEWHPTQ 159 (359)
T ss_dssp HTTCEEEEECTTTC------CTTTSSCHHHHHHHHHH-H--CS-EEEEE-SSCHHHHHHHHHHSSSCEEEEECSSCCHHH
T ss_pred HcCCeEEEeCCccc------cCCCCcCHHHHHHHHHH-h--cC-EEEEe-cCChHHHHHHHHhCCCCEEcCCCCCCCccH
Confidence 34555666654422 23667998876653222 2 22 33343 233333444555667999998877777777
Q ss_pred hhhhhhhhhHHHHHHHHHHhcccccccchhhhhhhcccccCcEEEEEecC--hhHHHHHHHHHhCCCEEEEEecCCc---
Q psy7896 308 ASMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGYG--DVGKGCAQSLRLFGSRVIVTEIDPI--- 382 (718)
Q Consensus 308 AvaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~G--~IG~~vA~~l~~fGa~Viv~d~dp~--- 382 (718)
++++-|.+-+ ..| .+.|.+|++||=| ++....+..+..||++|.++-+...
T Consensus 160 aLaDl~Ti~E-----------------------~~g-~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~ 215 (359)
T 2w37_A 160 MLADFMTVKE-----------------------NFG-KLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPT 215 (359)
T ss_dssp HHHHHHHHHH-----------------------HHS-CCTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCC
T ss_pred HHHHHHHHHH-----------------------HhC-CcCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCC
Confidence 7777766532 112 5889999999996 9999999999999999999754222
Q ss_pred cHHH------HhhcC--ce-ecCHHHHhccCcEEEEcC----CC-----------CCCcCHHHHhcCC---CCeEEEEcC
Q psy7896 383 NALQ------ASMEG--YE-VTTMEEAAKEGGIFVTTT----GC-----------KDIIRGEHFLQMR---DDAIVCNIG 435 (718)
Q Consensus 383 ~al~------a~~~G--~~-v~~Leell~~aDiIi~at----gt-----------~~lI~~e~l~~MK---~gAiLIN~G 435 (718)
.... +...| +. ..+++|+++.+|||.+.. |. ..-++.+.++.+| +++++.-++
T Consensus 216 ~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcL 295 (359)
T 2w37_A 216 EETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDVWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCL 295 (359)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECS
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEcccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECCC
Confidence 1111 11234 22 457999999999999842 21 2458999999999 999999997
Q ss_pred CC
Q psy7896 436 HF 437 (718)
Q Consensus 436 Rg 437 (718)
-.
T Consensus 296 P~ 297 (359)
T 2w37_A 296 PA 297 (359)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 210
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.67 E-value=0.0031 Score=67.88 Aligned_cols=36 Identities=36% Similarity=0.374 Sum_probs=33.1
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.+++|.|||.|.+|..+|..++.+|.+|++++..+.
T Consensus 141 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~ 176 (404)
T 3fg2_P 141 DKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPR 176 (404)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 589999999999999999999999999999987653
No 211
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.66 E-value=0.0037 Score=66.83 Aligned_cols=91 Identities=15% Similarity=0.165 Sum_probs=68.1
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhcCce-ec-------CHHHHhc-----cCcEEEEcC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASMEGYE-VT-------TMEEAAK-----EGGIFVTTT 411 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~G~~-v~-------~Leell~-----~aDiIi~at 411 (718)
-.|++|.|+|.|.||..+++.++.+|+ +|++++.++.+...+...|.. +. ++.+.++ ..|+++.++
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~ 273 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCA 273 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECC
Confidence 368999999999999999999999999 899998887664444444543 21 2333332 479999998
Q ss_pred CCCCCcCHHHHhcCCCC-eEEEEcCCC
Q psy7896 412 GCKDIIRGEHFLQMRDD-AIVCNIGHF 437 (718)
Q Consensus 412 gt~~lI~~e~l~~MK~g-AiLIN~GRg 437 (718)
|....+ ...++.++++ ..++.+|..
T Consensus 274 G~~~~~-~~~~~~l~~~~G~iv~~G~~ 299 (376)
T 1e3i_A 274 GTAQTL-KAAVDCTVLGWGSCTVVGAK 299 (376)
T ss_dssp CCHHHH-HHHHHTBCTTTCEEEECCCS
T ss_pred CCHHHH-HHHHHHhhcCCCEEEEECCC
Confidence 864333 3668899999 999998863
No 212
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.65 E-value=0.0038 Score=66.61 Aligned_cols=91 Identities=15% Similarity=0.239 Sum_probs=68.1
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhcCce-ec-------CHHHHhc-----cCcEEEEcC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASMEGYE-VT-------TMEEAAK-----EGGIFVTTT 411 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~G~~-v~-------~Leell~-----~aDiIi~at 411 (718)
-.|++|.|+|.|.||..+++.++.+|+ +|++++.++.+...+...|.. +. ++.+.++ ..|+++.++
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~ 270 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECV 270 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECC
Confidence 368999999999999999999999999 899998887664444444542 21 2444333 479999988
Q ss_pred CCCCCcCHHHHhcCCCC-eEEEEcCCC
Q psy7896 412 GCKDIIRGEHFLQMRDD-AIVCNIGHF 437 (718)
Q Consensus 412 gt~~lI~~e~l~~MK~g-AiLIN~GRg 437 (718)
+....+ ...++.++++ ..++.+|..
T Consensus 271 g~~~~~-~~~~~~l~~~~G~iv~~G~~ 296 (374)
T 1cdo_A 271 GNVGVM-RNALESCLKGWGVSVLVGWT 296 (374)
T ss_dssp CCHHHH-HHHHHTBCTTTCEEEECSCC
T ss_pred CCHHHH-HHHHHHhhcCCcEEEEEcCC
Confidence 763332 3568899999 999999864
No 213
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.64 E-value=0.0017 Score=64.77 Aligned_cols=101 Identities=11% Similarity=0.148 Sum_probs=65.3
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec--------CHHHH-hccCcEEEEcCCCC--CC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT--------TMEEA-AKEGGIFVTTTGCK--DI 416 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~--------~Leel-l~~aDiIi~atgt~--~l 416 (718)
.+++.|+|+|++|+.+|+.|...|. |+++|++|....... .|+.+. .++++ ++.+|.++.++++. ++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~ 86 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETI 86 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHHH
Confidence 4689999999999999999999999 999998886543333 454431 23344 67899999887753 33
Q ss_pred cCHHHHhcCCCCeEEEEcCCCCccccHHHHhccccc
Q psy7896 417 IRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDKNAVE 452 (718)
Q Consensus 417 I~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~ 452 (718)
.-......+.+...++.-.+. +-..+.|...+.+
T Consensus 87 ~~~~~a~~~~~~~~iia~~~~--~~~~~~l~~~G~~ 120 (234)
T 2aef_A 87 HCILGIRKIDESVRIIAEAER--YENIEQLRMAGAD 120 (234)
T ss_dssp HHHHHHHHHCSSSEEEEECSS--GGGHHHHHHHTCS
T ss_pred HHHHHHHHHCCCCeEEEEECC--HhHHHHHHHCCCC
Confidence 334455666777444443332 2233445544433
No 214
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.62 E-value=0.0017 Score=64.12 Aligned_cols=100 Identities=10% Similarity=0.019 Sum_probs=62.4
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHH-hhcCcee--------cCHHHH-hccCcEEEEcCCCCC--C
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA-SMEGYEV--------TTMEEA-AKEGGIFVTTTGCKD--I 416 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a-~~~G~~v--------~~Leel-l~~aDiIi~atgt~~--l 416 (718)
++|.|+|+|++|+.+|+.|...|.+|+++|.+|...... ...|..+ ..++++ ++++|+++.++++.. +
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~ 80 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVNL 80 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHHH
Confidence 469999999999999999999999999999998654332 1234332 124444 678999999887632 2
Q ss_pred cCHHHHhcCCCCeEEEEcCCCCccccHHHHhccc
Q psy7896 417 IRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDKNA 450 (718)
Q Consensus 417 I~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~ 450 (718)
+-......+.+...++-..+ +.-..+.|...+
T Consensus 81 ~~~~~a~~~~~~~~iia~~~--~~~~~~~l~~~G 112 (218)
T 3l4b_C 81 FIAQLVMKDFGVKRVVSLVN--DPGNMEIFKKMG 112 (218)
T ss_dssp HHHHHHHHTSCCCEEEECCC--SGGGHHHHHHHT
T ss_pred HHHHHHHHHcCCCeEEEEEe--CcchHHHHHHCC
Confidence 22233333334444443333 223344455443
No 215
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.61 E-value=0.0023 Score=70.75 Aligned_cols=94 Identities=27% Similarity=0.365 Sum_probs=56.9
Q ss_pred hcccccCcEEEEEecChhHHHHHHHHHhCCCEEE-EEecCC------------c--cHHHHh--hcC-------ceecCH
Q psy7896 342 LDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVI-VTEIDP------------I--NALQAS--MEG-------YEVTTM 397 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Vi-v~d~dp------------~--~al~a~--~~G-------~~v~~L 397 (718)
.|.+++|++|.|.|+|++|+.+|+.|..+|++|+ +.|.++ . ..+... ..| .+..+-
T Consensus 206 ~g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~ 285 (421)
T 2yfq_A 206 FGIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITD 285 (421)
T ss_dssp TTCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC------------
T ss_pred cCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCc
Confidence 4678999999999999999999999999999988 567662 0 111111 111 122333
Q ss_pred HHHhc-cCcEEEEcCCCCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 398 EEAAK-EGGIFVTTTGCKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 398 eell~-~aDiIi~atgt~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
++++. .+||++.|+ +.+.|+.+....++ .-+++-.+-+
T Consensus 286 ~~~~~~~~DIliP~A-~~n~i~~~~A~~l~-ak~VvEgAN~ 324 (421)
T 2yfq_A 286 EEFWTKEYDIIVPAA-LENVITGERAKTIN-AKLVCEAANG 324 (421)
T ss_dssp ---------CEEECS-CSSCSCHHHHTTCC-CSEEECCSSS
T ss_pred cchhcCCccEEEEcC-CcCcCCcccHHHcC-CeEEEeCCcc
Confidence 45543 689999875 34689999888883 2344444443
No 216
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.61 E-value=0.0036 Score=66.78 Aligned_cols=91 Identities=16% Similarity=0.123 Sum_probs=68.0
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhcCce-ec-------CHHHHhc-----cCcEEEEcC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASMEGYE-VT-------TMEEAAK-----EGGIFVTTT 411 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~G~~-v~-------~Leell~-----~aDiIi~at 411 (718)
-.|++|.|+|.|.||..+++.++.+|+ +|++++.++.+...+...|.. +. ++.+.++ ..|+++.++
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~ 269 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECA 269 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECC
Confidence 368999999999999999999999999 899998877664444445543 21 2333332 479999988
Q ss_pred CCCCCcCHHHHhcCCCC-eEEEEcCCC
Q psy7896 412 GCKDIIRGEHFLQMRDD-AIVCNIGHF 437 (718)
Q Consensus 412 gt~~lI~~e~l~~MK~g-AiLIN~GRg 437 (718)
|....+ ...++.++++ ..++.+|..
T Consensus 270 g~~~~~-~~~~~~l~~~~G~iv~~G~~ 295 (373)
T 1p0f_A 270 GRIETM-MNALQSTYCGSGVTVVLGLA 295 (373)
T ss_dssp CCHHHH-HHHHHTBCTTTCEEEECCCC
T ss_pred CCHHHH-HHHHHHHhcCCCEEEEEccC
Confidence 763333 3568899999 999999864
No 217
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=96.61 E-value=0.045 Score=59.33 Aligned_cols=161 Identities=17% Similarity=0.099 Sum_probs=107.4
Q ss_pred cccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHHHHHHHHHh
Q psy7896 248 LYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEVAALHLEHL 327 (718)
Q Consensus 248 ~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i~~~~l~~l 327 (718)
..|-+||+.|.+.--.. + .. +.|+ +++-.-.+...++--+++|++.-.+...=.|++++-|.+-+
T Consensus 109 s~~kgEsl~DTarvLs~-~--~D-~Ivi-R~~~~~~~~~lA~~s~vPVINa~~~~~HPtQaLaDl~Ti~E---------- 173 (365)
T 4amu_A 109 NMGKKESIEDTAKVLGR-F--YD-GIEF-RGFAQSDVDALVKYSGVPVWNGLTDDEHPTQIIADFMTMKE---------- 173 (365)
T ss_dssp CCSSSSCHHHHHHHHHH-H--CS-EEEE-ECSCHHHHHHHHHHHCSCEEEEECSSCCHHHHHHHHHHHHH----------
T ss_pred cCCCCcCHHHHHHHHHh-h--Cc-EEEE-ecCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHH----------
Confidence 35677998876653222 2 22 3333 33333344445566789999877666666677777665432
Q ss_pred cccccccchhhhhhhcccccCcEEEEEecC--hhHHHHHHHHHhCCCEEEEEecCCccH-----H-H-----HhhcCce-
Q psy7896 328 GVKLTKLTEDQAKYLDIMLAGKVAVVAGYG--DVGKGCAQSLRLFGSRVIVTEIDPINA-----L-Q-----ASMEGYE- 393 (718)
Q Consensus 328 gv~~~~~~~~~~~~~g~eL~GktVGIIG~G--~IG~~vA~~l~~fGa~Viv~d~dp~~a-----l-~-----a~~~G~~- 393 (718)
..| .+.|++|++||=+ ++....+..+..||++|.++-+..... . + +...|..
T Consensus 174 -------------~~G-~l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i 239 (365)
T 4amu_A 174 -------------KFG-NLKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSL 239 (365)
T ss_dssp -------------HHS-SCTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEE
T ss_pred -------------HhC-CCCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEE
Confidence 122 3899999999998 789999999999999999985432211 1 0 1223432
Q ss_pred --ecCHHHHhccCcEEEEcC----C-------------CCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 394 --VTTMEEAAKEGGIFVTTT----G-------------CKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 394 --v~~Leell~~aDiIi~at----g-------------t~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
..+++|+++.+|||.+-. + ...-++.+.++.+|+++++.-+.-.
T Consensus 240 ~~~~d~~eav~~aDVVytd~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcLP~ 302 (365)
T 4amu_A 240 RFSTDKILAAQDADVIYTDVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCLPA 302 (365)
T ss_dssp EEESCHHHHTTTCSEEEECCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECSCC
T ss_pred EEECCHHHHhcCCCEEEecccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCCC
Confidence 358999999999998731 1 1245899999999999999998764
No 218
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.60 E-value=0.0046 Score=68.25 Aligned_cols=95 Identities=26% Similarity=0.370 Sum_probs=65.5
Q ss_pred hcccccCcEEEEEecChhHHHHHHHHHhCCCEEE-EEec----------CCccHHHHh-hcC-ce--ecCHHHHhc-cCc
Q psy7896 342 LDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVI-VTEI----------DPINALQAS-MEG-YE--VTTMEEAAK-EGG 405 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Vi-v~d~----------dp~~al~a~-~~G-~~--v~~Leell~-~aD 405 (718)
.|.+++||+|.|.|+|++|+.+|+.|..+|++|+ +.|. |+....+.. ..| .. ..+-++++. .+|
T Consensus 212 ~g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~~~~D 291 (419)
T 3aoe_E 212 RGLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFGLEAE 291 (419)
T ss_dssp HTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGGSSCS
T ss_pred cCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhccCce
Confidence 4678999999999999999999999999999998 6665 222111111 111 10 122244443 799
Q ss_pred EEEEcCCCCCCcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 406 IFVTTTGCKDIIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 406 iIi~atgt~~lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
|++.|. ..+.|+.+....++.. +++..+...
T Consensus 292 VliP~A-~~n~i~~~~A~~l~ak-~V~EgAN~p 322 (419)
T 3aoe_E 292 VLVLAA-REGALDGDRARQVQAQ-AVVEVANFG 322 (419)
T ss_dssp EEEECS-CTTCBCHHHHTTCCCS-EEEECSTTC
T ss_pred EEEecc-cccccccchHhhCCce-EEEECCCCc
Confidence 999885 4568999999988654 666666543
No 219
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.60 E-value=0.004 Score=66.48 Aligned_cols=91 Identities=18% Similarity=0.209 Sum_probs=67.7
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhcCce-ec-------CHHHHhc-----cCcEEEEcC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASMEGYE-VT-------TMEEAAK-----EGGIFVTTT 411 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~G~~-v~-------~Leell~-----~aDiIi~at 411 (718)
-.|++|.|+|.|.||..+++.++.+|+ +|++++.++.+...+...|.. +. ++.+.++ ..|+++.++
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~ 269 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVI 269 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECC
Confidence 368999999999999999999999999 899998877664444444542 21 2333332 479999988
Q ss_pred CCCCCcCHHHHhcCCCC-eEEEEcCCC
Q psy7896 412 GCKDIIRGEHFLQMRDD-AIVCNIGHF 437 (718)
Q Consensus 412 gt~~lI~~e~l~~MK~g-AiLIN~GRg 437 (718)
+....+ ...++.++++ ..++.+|..
T Consensus 270 g~~~~~-~~~~~~l~~~~G~iv~~G~~ 295 (374)
T 2jhf_A 270 GRLDTM-VTALSCCQEAYGVSVIVGVP 295 (374)
T ss_dssp CCHHHH-HHHHHHBCTTTCEEEECSCC
T ss_pred CCHHHH-HHHHHHhhcCCcEEEEeccC
Confidence 763333 3568889999 999998864
No 220
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.59 E-value=0.0036 Score=67.32 Aligned_cols=69 Identities=16% Similarity=0.188 Sum_probs=49.6
Q ss_pred ccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce---ecC---HHHHhccCcEEEEcCC
Q psy7896 344 IMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE---VTT---MEEAAKEGGIFVTTTG 412 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~---v~~---Leell~~aDiIi~atg 412 (718)
.-+.||+|+|+|.|.+|+.+++.++.+|.+|+++|.++........+.+. +.+ +.++++.+|+|+...+
T Consensus 10 ~~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~~~e 84 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTYEFE 84 (389)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEESCC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeeeccc
Confidence 34789999999999999999999999999999998776432111111111 122 5678889999865443
No 221
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.57 E-value=0.0021 Score=67.84 Aligned_cols=91 Identities=18% Similarity=0.177 Sum_probs=67.4
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-ec-----CHHHHh----ccCcEEEEcCCCCCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-VT-----TMEEAA----KEGGIFVTTTGCKDI 416 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v~-----~Leell----~~aDiIi~atgt~~l 416 (718)
.|++|.|+|.|.||..+++.++.+|++|+++++++.+...+...|.. +. ++.+.+ ...|+++.+.+....
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 243 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA 243 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHHH
Confidence 58999999999999999999999999999998877654333334532 11 222222 357999988876333
Q ss_pred cCHHHHhcCCCCeEEEEcCCCC
Q psy7896 417 IRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 417 I~~e~l~~MK~gAiLIN~GRgd 438 (718)
+ ...++.|+++..++++|...
T Consensus 244 ~-~~~~~~l~~~G~~v~~g~~~ 264 (339)
T 1rjw_A 244 F-QSAYNSIRRGGACVLVGLPP 264 (339)
T ss_dssp H-HHHHHHEEEEEEEEECCCCS
T ss_pred H-HHHHHHhhcCCEEEEecccC
Confidence 2 45678899999999998754
No 222
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=96.56 E-value=0.0026 Score=70.73 Aligned_cols=85 Identities=20% Similarity=0.215 Sum_probs=58.9
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhh-----------cC-----------ce-ecCHHHHhccC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASM-----------EG-----------YE-VTTMEEAAKEG 404 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~-----------~G-----------~~-v~~Leell~~a 404 (718)
=++|+|||.|.+|..+|..+...|.+|+++|+++.....+.. .| .. ..++ +.++++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 468999999999999999999999999999988753221110 11 11 2345 567899
Q ss_pred cEEEEcCCCCC----CcCHHHHhcCCCCeEEEE
Q psy7896 405 GIFVTTTGCKD----IIRGEHFLQMRDDAIVCN 433 (718)
Q Consensus 405 DiIi~atgt~~----lI~~e~l~~MK~gAiLIN 433 (718)
|+|+.+....- -+-.+....++++++|+.
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 99999865421 111223346889998885
No 223
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=96.55 E-value=0.037 Score=58.69 Aligned_cols=185 Identities=16% Similarity=0.127 Sum_probs=116.7
Q ss_pred ccceEEEecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhh
Q psy7896 229 LGVPAINVNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA 308 (718)
Q Consensus 229 l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~A 308 (718)
|+-=+++.+.+ +...|-+||+.|.+.--.. +. -+.|+... ---.+...++--+++|++.-.+...=.|+
T Consensus 61 LGg~~i~l~~~------~ss~~kgEsl~DTarvls~-~~---D~iviR~~-~~~~~~~lA~~~~vPVINag~~~~HPtQa 129 (307)
T 3tpf_A 61 LGGKALFLSSN------DLQLSRGEPVKDTARVIGA-MV---DFVMMRVN-KHETLLEFARYSKAPVINALSELYHPTQV 129 (307)
T ss_dssp TTCEEEEECTT------TCCTTTSSCHHHHHHHHHH-HS---SEEEEECS-CHHHHHHHHHHCSSCEEEEECSSCCHHHH
T ss_pred cCCeEEEcCcc------cccCCCCCCHHHHHHHHHH-hC---CEEEEecC-ChHHHHHHHHhCCCCEEeCCCCCcCcHHH
Confidence 44445555443 2234667998876653222 21 23344322 22233344455678999876665555677
Q ss_pred hhhhhhhhHHHHHHHHHHhcccccccchhhhhhhccccc-CcEEEEEecC-hhHHHHHHHHHhCCCEEEEEecCCcc---
Q psy7896 309 SMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLA-GKVAVVAGYG-DVGKGCAQSLRLFGSRVIVTEIDPIN--- 383 (718)
Q Consensus 309 vaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~-GktVGIIG~G-~IG~~vA~~l~~fGa~Viv~d~dp~~--- 383 (718)
.++-|.+-+ ..| .+. |++|++||=+ ++....+..+..||++|.++-+....
T Consensus 130 LaDl~Ti~e-----------------------~~g-~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~ 185 (307)
T 3tpf_A 130 LGDLFTIKE-----------------------WNK-MQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISP 185 (307)
T ss_dssp HHHHHHHHH-----------------------TTC-CGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCH
T ss_pred HHHHHHHHH-----------------------HhC-CCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCH
Confidence 666655422 112 478 9999999974 58888888999999999997543221
Q ss_pred HH-H-H----hhcCce---ecCHHHHhccCcEEEEcC----C------------CCCCcCHHHHhcCCCCeEEEEcCCC-
Q psy7896 384 AL-Q-A----SMEGYE---VTTMEEAAKEGGIFVTTT----G------------CKDIIRGEHFLQMRDDAIVCNIGHF- 437 (718)
Q Consensus 384 al-~-a----~~~G~~---v~~Leell~~aDiIi~at----g------------t~~lI~~e~l~~MK~gAiLIN~GRg- 437 (718)
.. + + ...|.. ..+++|+++.+|+|.+.. + ...-++.+.++.+|+++++.-++-.
T Consensus 186 ~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~lPa~ 265 (307)
T 3tpf_A 186 EIWEFAMKQALISGAKISLGYDKFEALKDKDVVITDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAY 265 (307)
T ss_dssp HHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECSCCC
T ss_pred HHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecCcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCCCC
Confidence 11 1 1 123432 358999999999998753 1 1245899999999999999999752
Q ss_pred -CccccHHHHhc
Q psy7896 438 -DCEIQVSWLDK 448 (718)
Q Consensus 438 -d~Eid~~aL~~ 448 (718)
+.||+.+-+..
T Consensus 266 Rg~EI~~eV~d~ 277 (307)
T 3tpf_A 266 RGYEVSEEIFEK 277 (307)
T ss_dssp BTTTBCHHHHHH
T ss_pred CCceeCHHHhCC
Confidence 35787654443
No 224
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.54 E-value=0.0027 Score=65.74 Aligned_cols=88 Identities=20% Similarity=0.200 Sum_probs=64.4
Q ss_pred cCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-ecC------HHHHhccCcEEEEcCCCCCCcC
Q psy7896 347 AGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-VTT------MEEAAKEGGIFVTTTGCKDIIR 418 (718)
Q Consensus 347 ~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v~~------Leell~~aDiIi~atgt~~lI~ 418 (718)
.|++|.|+|. |.||+.+++.++.+|++|+++++++.+...+...|.. +.+ +.+.++..|+++. .|.. . -
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~~-~-~ 201 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRGK-E-V 201 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSCT-T-H
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCHH-H-H
Confidence 6899999998 9999999999999999999999877654333334542 212 2223356899999 8773 2 3
Q ss_pred HHHHhcCCCCeEEEEcCCC
Q psy7896 419 GEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 419 ~e~l~~MK~gAiLIN~GRg 437 (718)
...++.|+++..++++|..
T Consensus 202 ~~~~~~l~~~G~~v~~g~~ 220 (302)
T 1iz0_A 202 EESLGLLAHGGRLVYIGAA 220 (302)
T ss_dssp HHHHTTEEEEEEEEEC---
T ss_pred HHHHHhhccCCEEEEEeCC
Confidence 5678899999999999864
No 225
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.54 E-value=0.0032 Score=67.09 Aligned_cols=90 Identities=23% Similarity=0.188 Sum_probs=66.8
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee------cCHHHHh----c--cCcEEEEcCCC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV------TTMEEAA----K--EGGIFVTTTGC 413 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v------~~Leell----~--~aDiIi~atgt 413 (718)
-.|++|.|+|.|.||..+++.++.+|++|++++.++.+...+...|... .++.+.+ . ..|+++.+.|.
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 267 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGG 267 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCCh
Confidence 3689999999999999999999999999999988776543343345421 1232222 1 57999988884
Q ss_pred CCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 414 KDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 414 ~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
. .-...++.++++..++.+|..
T Consensus 268 ~--~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 268 A--GLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp S--CHHHHHHHEEEEEEEEEECCC
T ss_pred H--HHHHHHHHhhcCCEEEEEecC
Confidence 2 234678899999999999864
No 226
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=96.53 E-value=0.0038 Score=65.66 Aligned_cols=89 Identities=16% Similarity=0.202 Sum_probs=60.2
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee--------------cCHHHHhccCcEEEEc
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV--------------TTMEEAAKEGGIFVTT 410 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v--------------~~Leell~~aDiIi~a 410 (718)
....++|+|||.|.+|..+|..|..-|.+|+++ +++.........|... .+.++ ++.+|+|+++
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vila 93 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFC 93 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEEC
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEE
Confidence 345689999999999999999999999999999 7764332222233221 23433 5789999998
Q ss_pred CCCCCCcCHHHH----hcCCCCeEEEEcCCC
Q psy7896 411 TGCKDIIRGEHF----LQMRDDAIVCNIGHF 437 (718)
Q Consensus 411 tgt~~lI~~e~l----~~MK~gAiLIN~GRg 437 (718)
+....+ .+.+ ..++++.+++.+.-|
T Consensus 94 vk~~~~--~~~l~~l~~~l~~~~~iv~~~nG 122 (318)
T 3hwr_A 94 VKSTDT--QSAALAMKPALAKSALVLSLQNG 122 (318)
T ss_dssp CCGGGH--HHHHHHHTTTSCTTCEEEEECSS
T ss_pred cccccH--HHHHHHHHHhcCCCCEEEEeCCC
Confidence 776533 2333 346778888887665
No 227
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=96.52 E-value=0.0079 Score=61.54 Aligned_cols=38 Identities=29% Similarity=0.288 Sum_probs=34.2
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
...+++|.|||.|.+|..+|..++.+|.+|+++++.+.
T Consensus 170 ~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~ 207 (338)
T 3itj_A 170 IFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH 207 (338)
T ss_dssp GGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred hcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 45689999999999999999999999999999987653
No 228
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=96.51 E-value=0.0028 Score=70.72 Aligned_cols=91 Identities=19% Similarity=0.240 Sum_probs=60.1
Q ss_pred hcccccCcEEEEEecChhHHHHHHHHHhCCCEEE-EEec-------CCc---c--HHHHhhc--------------Ccee
Q psy7896 342 LDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVI-VTEI-------DPI---N--ALQASME--------------GYEV 394 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Vi-v~d~-------dp~---~--al~a~~~--------------G~~v 394 (718)
.|.++.|+||.|.|+|++|+.+|+.|..+|++|+ +.|. +.+ . .+..... +.++
T Consensus 246 ~G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~ 325 (470)
T 2bma_A 246 LNIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKY 325 (470)
T ss_dssp TTCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEE
T ss_pred ccCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEE
Confidence 3678999999999999999999999999999988 5553 222 1 1111000 2233
Q ss_pred cCHHHHh-ccCcEEEEcCCCCCCcCHHHHhcC-CCCeEEEE
Q psy7896 395 TTMEEAA-KEGGIFVTTTGCKDIIRGEHFLQM-RDDAIVCN 433 (718)
Q Consensus 395 ~~Leell-~~aDiIi~atgt~~lI~~e~l~~M-K~gAiLIN 433 (718)
.+-++++ -.|||++.|. +.+.|+.+....+ ++++.+|-
T Consensus 326 v~~~~~~~~~~DI~iPcA-~~~~I~~~na~~l~~~~ak~V~ 365 (470)
T 2bma_A 326 FPNEKPWGVPCTLAFPCA-TQNDVDLDQAKLLQKNGCILVG 365 (470)
T ss_dssp CSSCCTTSSCCSEEEECS-STTCBCSHHHHHHHHTTCCEEE
T ss_pred ecCcCeeecCccEEEecc-ccCcCCHHHHHHHHhcCcEEEE
Confidence 3223443 3789999876 4568888887777 33444443
No 229
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.50 E-value=0.0022 Score=61.91 Aligned_cols=90 Identities=13% Similarity=0.158 Sum_probs=62.9
Q ss_pred ccCcEEEEEe-cChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-ec-----CHHH-Hh-----ccCcEEEEcCC
Q psy7896 346 LAGKVAVVAG-YGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-VT-----TMEE-AA-----KEGGIFVTTTG 412 (718)
Q Consensus 346 L~GktVGIIG-~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v~-----~Lee-ll-----~~aDiIi~atg 412 (718)
-.|++|.|+| .|.||+.+++.++..|++|+++++++.+...+...|.. +. +..+ +. ...|+++.+.+
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 116 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA 116 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence 3689999999 69999999999999999999998876543223233432 11 1222 21 13688888776
Q ss_pred CCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 413 CKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
.. .....++.|+++..++++|..
T Consensus 117 ~~--~~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 117 GE--AIQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp TH--HHHHHHHTEEEEEEEEECSCG
T ss_pred hH--HHHHHHHHhccCCEEEEEcCC
Confidence 32 234567888999999998864
No 230
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.50 E-value=0.004 Score=66.40 Aligned_cols=91 Identities=18% Similarity=0.217 Sum_probs=67.5
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhcCce-ec-------CHHHHhc-----cCcEEEEcC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASMEGYE-VT-------TMEEAAK-----EGGIFVTTT 411 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~G~~-v~-------~Leell~-----~aDiIi~at 411 (718)
-.|++|.|+|.|.||..+++.++.+|+ +|++++.++.+...+...|.. +. ++.+.++ ..|+++.++
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~ 268 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECI 268 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECC
Confidence 368999999999999999999999999 899998877664333334532 21 2333333 479999988
Q ss_pred CCCCCcCHHHHhcCCCC-eEEEEcCCC
Q psy7896 412 GCKDIIRGEHFLQMRDD-AIVCNIGHF 437 (718)
Q Consensus 412 gt~~lI~~e~l~~MK~g-AiLIN~GRg 437 (718)
+....+ ...++.++++ ..++.+|..
T Consensus 269 g~~~~~-~~~~~~l~~~~G~iv~~G~~ 294 (373)
T 2fzw_A 269 GNVKVM-RAALEACHKGWGVSVVVGVA 294 (373)
T ss_dssp CCHHHH-HHHHHTBCTTTCEEEECSCC
T ss_pred CcHHHH-HHHHHhhccCCcEEEEEecC
Confidence 763332 4568899999 999999864
No 231
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.50 E-value=0.0034 Score=67.23 Aligned_cols=91 Identities=18% Similarity=0.195 Sum_probs=68.5
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhcCcee-c-------CHHHHhc-----cCcEEEEcC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASMEGYEV-T-------TMEEAAK-----EGGIFVTTT 411 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~G~~v-~-------~Leell~-----~aDiIi~at 411 (718)
-.|.+|.|+|.|.||..+++.++.+|+ +|++++.++.+...+...|... . ++.+.++ ..|+++.++
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~ 271 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECI 271 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECC
Confidence 368999999999999999999999999 8999998887654455556431 1 2333332 379999998
Q ss_pred CCCCCcCHHHHhcCCCC-eEEEEcCCC
Q psy7896 412 GCKDIIRGEHFLQMRDD-AIVCNIGHF 437 (718)
Q Consensus 412 gt~~lI~~e~l~~MK~g-AiLIN~GRg 437 (718)
|....+ ...++.++++ ..++.+|-.
T Consensus 272 g~~~~~-~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 272 GNVSVM-RAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp CCHHHH-HHHHHTBCTTTCEEEECSCC
T ss_pred CCHHHH-HHHHHHhhccCCEEEEEccc
Confidence 874333 3578899996 999998864
No 232
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.49 E-value=0.01 Score=69.34 Aligned_cols=115 Identities=16% Similarity=0.075 Sum_probs=71.9
Q ss_pred cCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhh----hhhhh---hhhHHH---HHHHHHH---hccccc-
Q psy7896 267 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA----SMEGY---ELDEEV---AALHLEH---LGVKLT- 332 (718)
Q Consensus 267 ~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~A----vaeGf---~L~r~i---~~~~l~~---lgv~~~- 332 (718)
...++|+|||.|+.|+.+|..|+++|+.|+++|..+....+. ...++ ....+. ....+.. .++.+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i~~ 466 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLALG 466 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEECS
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEEEe
Confidence 356899999999999999999999999999999865422111 11121 111111 0111100 012210
Q ss_pred -c---------c----------chh---------hhhhh-----------------cccccCcEEEEEe--cChhHHHHH
Q psy7896 333 -K---------L----------TED---------QAKYL-----------------DIMLAGKVAVVAG--YGDVGKGCA 364 (718)
Q Consensus 333 -~---------~----------~~~---------~~~~~-----------------g~eL~GktVGIIG--~G~IG~~vA 364 (718)
+ . ... ..... +....|++|.||| .|.+|..+|
T Consensus 467 ~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A 546 (729)
T 1o94_A 467 QKPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLA 546 (729)
T ss_dssp CCCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHH
T ss_pred CeEEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHH
Confidence 0 0 000 00000 1223589999999 899999999
Q ss_pred HHHHhCCCEEEEEecCC
Q psy7896 365 QSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 365 ~~l~~fGa~Viv~d~dp 381 (718)
..|+.+|.+|+++++.+
T Consensus 547 ~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 547 EKLATAGHEVTIVSGVH 563 (729)
T ss_dssp HHHHHTTCEEEEEESSC
T ss_pred HHHHHcCCEEEEEeccc
Confidence 99999999999998766
No 233
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.49 E-value=0.0025 Score=67.06 Aligned_cols=92 Identities=22% Similarity=0.198 Sum_probs=67.8
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee------cCHHHHhc----cCcEEEEcCCCCC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV------TTMEEAAK----EGGIFVTTTGCKD 415 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v------~~Leell~----~aDiIi~atgt~~ 415 (718)
-.|++|.|+|.|.||..+++.++.+|++|++++.++.+...+...|... .++.+.++ ..|+++.+++...
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~ 244 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPK 244 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHH
Confidence 4689999999999999999999999999999988776544444445431 13333332 5788888876543
Q ss_pred CcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 416 IIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 416 lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
.+ ...++.++++..++.+|...
T Consensus 245 ~~-~~~~~~l~~~G~iv~~G~~~ 266 (340)
T 3s2e_A 245 AF-SQAIGMVRRGGTIALNGLPP 266 (340)
T ss_dssp HH-HHHHHHEEEEEEEEECSCCS
T ss_pred HH-HHHHHHhccCCEEEEeCCCC
Confidence 33 35678899999999998653
No 234
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.49 E-value=0.0033 Score=67.24 Aligned_cols=114 Identities=18% Similarity=0.233 Sum_probs=68.9
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhh-----hhhhhhhhhhhHHH---HHHHHHHhcccccc------
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINA-----LQASMEGYELDEEV---AALHLEHLGVKLTK------ 333 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~-----v~AvaeGf~L~r~i---~~~~l~~lgv~~~~------ 333 (718)
+|..++|||.|+.|..+|..|+++| +|+++|..+... ......+..-..++ ....+...++++-.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~ 85 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKL 85 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEE
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEE
Confidence 7899999999999999999999999 999999776421 00111111000000 00111122222100
Q ss_pred --------------c-----------chhhhhhhc-------------ccc-----cCcEEEEEecChhHHHHHHHHHhC
Q psy7896 334 --------------L-----------TEDQAKYLD-------------IML-----AGKVAVVAGYGDVGKGCAQSLRLF 370 (718)
Q Consensus 334 --------------~-----------~~~~~~~~g-------------~eL-----~GktVGIIG~G~IG~~vA~~l~~f 370 (718)
. .+......| ..+ .+++|.|||.|.+|..+|..++.+
T Consensus 86 id~~~~~V~~~g~~~~~d~lViATGs~p~~p~i~G~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~ 165 (367)
T 1xhc_A 86 IDRGRKVVITEKGEVPYDTLVLATGARAREPQIKGKEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEA 165 (367)
T ss_dssp EETTTTEEEESSCEEECSEEEECCCEEECCCCSBTGGGEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHT
T ss_pred EECCCCEEEECCcEEECCEEEECCCCCCCCCCCCCcCCEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhC
Confidence 0 000000001 012 469999999999999999999999
Q ss_pred CCEEEEEecCCc
Q psy7896 371 GSRVIVTEIDPI 382 (718)
Q Consensus 371 Ga~Viv~d~dp~ 382 (718)
|.+|+++++.+.
T Consensus 166 g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 166 GYHVKLIHRGAM 177 (367)
T ss_dssp TCEEEEECSSSC
T ss_pred CCEEEEEeCCCe
Confidence 999999987653
No 235
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.46 E-value=0.0041 Score=65.83 Aligned_cols=91 Identities=16% Similarity=0.177 Sum_probs=66.6
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-e---c---C-HHHH---h-----ccCcEEEE
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-V---T---T-MEEA---A-----KEGGIFVT 409 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v---~---~-Leel---l-----~~aDiIi~ 409 (718)
-.|++|.|+|.|.||..+++.++.+|++|++++.++.+...+...|.. + . + .+++ . +..|+++.
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid 246 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTID 246 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEE
Confidence 368999999999999999999999999999998877654333334532 1 1 1 2222 2 24899999
Q ss_pred cCCCCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 410 TTGCKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 410 atgt~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
+++....+ ...++.++++..++.+|..
T Consensus 247 ~~g~~~~~-~~~~~~l~~~G~iv~~G~~ 273 (352)
T 1e3j_A 247 CSGNEKCI-TIGINITRTGGTLMLVGMG 273 (352)
T ss_dssp CSCCHHHH-HHHHHHSCTTCEEEECSCC
T ss_pred CCCCHHHH-HHHHHHHhcCCEEEEEecC
Confidence 88764322 3568899999999999864
No 236
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.46 E-value=0.0024 Score=68.49 Aligned_cols=91 Identities=20% Similarity=0.232 Sum_probs=67.7
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhcCce-e-----cCHHHHhcc--------CcEEEEc
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASMEGYE-V-----TTMEEAAKE--------GGIFVTT 410 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~G~~-v-----~~Leell~~--------aDiIi~a 410 (718)
-.|++|.|+|.|.||...++.++.+|+ +|++++.++.+...+...|.. + .++.+.+++ .|+++.+
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~ 260 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIEC 260 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEEC
Confidence 368999999999999999999999999 899998877654333344543 1 234444443 7999988
Q ss_pred CCCCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 411 TGCKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 411 tgt~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
+|....+ ...++.++++..++.+|..
T Consensus 261 ~G~~~~~-~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 261 AGVAETV-KQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp SCCHHHH-HHHHHHEEEEEEEEECSCC
T ss_pred CCCHHHH-HHHHHHhccCCEEEEEecc
Confidence 8764333 3567889999999999864
No 237
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.44 E-value=0.0041 Score=66.00 Aligned_cols=91 Identities=19% Similarity=0.269 Sum_probs=66.7
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhcCce-ec--C---HH----HHh----ccCcEEEEc
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASMEGYE-VT--T---ME----EAA----KEGGIFVTT 410 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~G~~-v~--~---Le----ell----~~aDiIi~a 410 (718)
-.|++|.|+|.|.||..+++.++.+|+ +|++++.++.+...+...|.. +. + -+ ++. +..|+++.+
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~ 249 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIEC 249 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEEC
Confidence 368999999999999999999999999 999998877654333344542 11 1 11 221 248999998
Q ss_pred CCCCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 411 TGCKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 411 tgt~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
++....+ ...++.++++..++.+|..
T Consensus 250 ~g~~~~~-~~~~~~l~~~G~iv~~G~~ 275 (356)
T 1pl8_A 250 TGAEASI-QAGIYATRSGGTLVLVGLG 275 (356)
T ss_dssp SCCHHHH-HHHHHHSCTTCEEEECSCC
T ss_pred CCChHHH-HHHHHHhcCCCEEEEEecC
Confidence 8764332 3568899999999999864
No 238
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=96.43 E-value=0.054 Score=58.22 Aligned_cols=171 Identities=16% Similarity=0.077 Sum_probs=106.7
Q ss_pred ccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHHHHHHHHHhc
Q psy7896 249 YGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEVAALHLEHLG 328 (718)
Q Consensus 249 ~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i~~~~l~~lg 328 (718)
.|-+||+.|.+.--.. + .. +.|+. .+-.-.+...++--+++|++.-.+...=.|+.++-|.+-+
T Consensus 109 ~~kgEsl~DTarvLs~-y--~D-~IviR-~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~TI~E----------- 172 (340)
T 4ep1_A 109 MGRGETVSDTAKVLSH-Y--ID-GIMIR-TFSHADVEELAKESSIPVINGLTDDHHPCQALADLMTIYE----------- 172 (340)
T ss_dssp ----CCTTHHHHHHHH-H--CS-EEEEE-CSCHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHH-----------
T ss_pred CCCCCCHHHHHHHHHH-h--CC-EEEEe-cCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHH-----------
Confidence 4567887765542211 1 12 33333 2322333444566678998876665555667666665432
Q ss_pred ccccccchhhhhhhcccccCcEEEEEecC-hhHHHHHHHHHhCCCEEEEEecCCcc---HH-H-----HhhcCc--e-ec
Q psy7896 329 VKLTKLTEDQAKYLDIMLAGKVAVVAGYG-DVGKGCAQSLRLFGSRVIVTEIDPIN---AL-Q-----ASMEGY--E-VT 395 (718)
Q Consensus 329 v~~~~~~~~~~~~~g~eL~GktVGIIG~G-~IG~~vA~~l~~fGa~Viv~d~dp~~---al-~-----a~~~G~--~-v~ 395 (718)
..| .+.|++|++||-| ++.+..+..+..||++|.++-+.... .. + +...|. . ..
T Consensus 173 ------------~~G-~l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~ 239 (340)
T 4ep1_A 173 ------------ETN-TFKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILH 239 (340)
T ss_dssp ------------HHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEES
T ss_pred ------------HhC-CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 112 4889999999975 58888888899999999997543221 11 0 112342 2 35
Q ss_pred CHHHHhccCcEEEEcC----CC-----------CCCcCHHHHhcCCCCeEEEEcCCC--CccccHHHHhc
Q psy7896 396 TMEEAAKEGGIFVTTT----GC-----------KDIIRGEHFLQMRDDAIVCNIGHF--DCEIQVSWLDK 448 (718)
Q Consensus 396 ~Leell~~aDiIi~at----gt-----------~~lI~~e~l~~MK~gAiLIN~GRg--d~Eid~~aL~~ 448 (718)
+++|+++.+|||.+.. +. ..-++.+.++.+|+++++.-++-. +.||+.+-+..
T Consensus 240 d~~eav~~aDVvyt~~w~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~eV~d~ 309 (340)
T 4ep1_A 240 NPELAVNEADFIYTDVWMSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCLPAHREEEVTGEIIDG 309 (340)
T ss_dssp CHHHHHTTCSEEEECCC------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCBTTTBCHHHHTS
T ss_pred CHHHHhCCCCEEEecCccCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCCCCCCCceeCHHHhCC
Confidence 8999999999998742 11 235899999999999999999842 35787655443
No 239
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.43 E-value=0.0078 Score=63.16 Aligned_cols=87 Identities=15% Similarity=0.083 Sum_probs=61.5
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCc----------e------ecCHHHHhccCcEEEEcCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGY----------E------VTTMEEAAKEGGIFVTTTG 412 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~----------~------v~~Leell~~aDiIi~atg 412 (718)
++|+|||.|.+|..+|..|..-|.+|+++++++...+. ..|. . ..+.+++.+.+|+|++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~~~i~--~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK 80 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDYETVK--AKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIK 80 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTHHHHH--HHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChHHHHH--hCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecC
Confidence 58999999999999999999999999999988742222 1222 1 1345666668999999877
Q ss_pred CCCCcCH-HHH-hcCCCCeEEEEcCCC
Q psy7896 413 CKDIIRG-EHF-LQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~~lI~~-e~l-~~MK~gAiLIN~GRg 437 (718)
...+-.. +.+ ..++++.+++.+.-|
T Consensus 81 ~~~~~~~l~~l~~~l~~~t~Iv~~~nG 107 (320)
T 3i83_A 81 VVEGADRVGLLRDAVAPDTGIVLISNG 107 (320)
T ss_dssp CCTTCCHHHHHTTSCCTTCEEEEECSS
T ss_pred CCChHHHHHHHHhhcCCCCEEEEeCCC
Confidence 6554331 122 356778888877554
No 240
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.40 E-value=0.041 Score=58.42 Aligned_cols=185 Identities=16% Similarity=0.104 Sum_probs=115.6
Q ss_pred ccceEEEecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhh
Q psy7896 229 LGVPAINVNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA 308 (718)
Q Consensus 229 l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~A 308 (718)
|+-=+++.+.+ +...|-+||+.|.+.--.. + . -+.|+.. +.--.+...++--+++|++.-.+...=.|+
T Consensus 70 LGg~~i~l~~~------~ss~~kgEsl~DTarvls~-~--~-D~iviR~-~~~~~~~~lA~~~~vPVINag~~~~HPtQa 138 (309)
T 4f2g_A 70 LGGHAVFMSTR------DTQLGRGEPVEDSAQVISR-M--V-DIIMIRT-FEQDIIQRFAENSRVPVINGLTNEYHPCQV 138 (309)
T ss_dssp TTCEEEEECCS------SCEETBEECHHHHHHHHHH-H--C-SEEEEEC-SCHHHHHHHHHTCSSCEEEEECSSCCHHHH
T ss_pred cCCeEEEcCcc------cccCCCCCCHHHHHHHHHH-h--C-CEEEEec-CCHHHHHHHHHhCCCCEEECCCCccCcHHH
Confidence 44445555543 2234667998876553212 2 1 2333332 222233334455678999877666666677
Q ss_pred hhhhhhhhHHHHHHHHHHhcccccccchhhhhhhcccccCcEEEEEecC-hhHHHHHHHHHhCCCEEEEEecCCcc---H
Q psy7896 309 SMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGYG-DVGKGCAQSLRLFGSRVIVTEIDPIN---A 384 (718)
Q Consensus 309 vaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~G-~IG~~vA~~l~~fGa~Viv~d~dp~~---a 384 (718)
.++-|.+-+ ..| .+.|++|++||=| ++....+..+..||++|.++-+.... .
T Consensus 139 LaDl~Ti~e-----------------------~~g-~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~ 194 (309)
T 4f2g_A 139 LADIFTYYE-----------------------HRG-PIRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYALDAK 194 (309)
T ss_dssp HHHHHHHHH-----------------------HHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGCCCGG
T ss_pred HHHHHHHHH-----------------------HhC-CCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccCCCHH
Confidence 777665432 112 4889999999975 58888888899999999997542221 1
Q ss_pred HHHhhcC--ce-ecCHHHHhccCcEEEEcC----CC------------CCCcCHHHHhcCCCCeEEEEcCCC--CccccH
Q psy7896 385 LQASMEG--YE-VTTMEEAAKEGGIFVTTT----GC------------KDIIRGEHFLQMRDDAIVCNIGHF--DCEIQV 443 (718)
Q Consensus 385 l~a~~~G--~~-v~~Leell~~aDiIi~at----gt------------~~lI~~e~l~~MK~gAiLIN~GRg--d~Eid~ 443 (718)
..+...| +. ..+++|+++.+|+|.+.. +. ..-++.+.++.+|+++++.-++-. +.||+.
T Consensus 195 ~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~ 274 (309)
T 4f2g_A 195 LVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGFEAENEARKRAFADWCVDEEMMSHANSDALFMHCLPAHRGEEVTA 274 (309)
T ss_dssp GSCGGGGGGEEECSSHHHHTTTCSEEEECCC------------CCSGGGGCBCHHHHTTSCTTCEEEECSSCCBTTTBCH
T ss_pred HHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcchhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCCCCCCCceecH
Confidence 1111123 22 358999999999998742 11 235899999999999999999752 357876
Q ss_pred HHHhc
Q psy7896 444 SWLDK 448 (718)
Q Consensus 444 ~aL~~ 448 (718)
+-+..
T Consensus 275 eV~d~ 279 (309)
T 4f2g_A 275 GVIDG 279 (309)
T ss_dssp HHHTS
T ss_pred HHhCC
Confidence 54443
No 241
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.39 E-value=0.002 Score=68.06 Aligned_cols=91 Identities=19% Similarity=0.270 Sum_probs=66.6
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhcCce-e-----cCHHHHhc------cCcEEEEcCCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASMEGYE-V-----TTMEEAAK------EGGIFVTTTGC 413 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~G~~-v-----~~Leell~------~aDiIi~atgt 413 (718)
.|++|.|+|.|.||..+++.++.+|+ +|+++++++.+...+...|.. + .++.+.++ ..|+++.+++.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 89999999999999999999999999 999998877553333333432 1 13333332 47999988876
Q ss_pred CCCcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 414 KDIIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 414 ~~lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
...+ ...++.|+++..++++|...
T Consensus 247 ~~~~-~~~~~~l~~~G~iv~~g~~~ 270 (348)
T 2d8a_A 247 PKAL-EQGLQAVTPAGRVSLLGLYP 270 (348)
T ss_dssp HHHH-HHHHHHEEEEEEEEECCCCS
T ss_pred HHHH-HHHHHHHhcCCEEEEEccCC
Confidence 3332 35678899999999998643
No 242
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.39 E-value=0.0043 Score=65.56 Aligned_cols=90 Identities=17% Similarity=0.230 Sum_probs=64.2
Q ss_pred ccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-----cCHHHHhc------cCcEEEEcCCC
Q psy7896 346 LAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-----TTMEEAAK------EGGIFVTTTGC 413 (718)
Q Consensus 346 L~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-----~~Leell~------~aDiIi~atgt 413 (718)
-.|++|.|+|. |.||..+++.++.+|++|++++.++.+...+...|... .++.+.++ ..|+++.+.|.
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~ 237 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGG 237 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC-
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCch
Confidence 46899999998 99999999999999999999988776543333334322 12333221 47999988886
Q ss_pred CCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 414 KDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 414 ~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
. .-...+..|+++..++.+|..
T Consensus 238 ~--~~~~~~~~l~~~G~iv~~G~~ 259 (342)
T 4eye_A 238 P--AFDDAVRTLASEGRLLVVGFA 259 (342)
T ss_dssp ---CHHHHHHTEEEEEEEEEC---
T ss_pred h--HHHHHHHhhcCCCEEEEEEcc
Confidence 4 234678899999999999864
No 243
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=96.38 E-value=0.0035 Score=66.23 Aligned_cols=86 Identities=13% Similarity=0.079 Sum_probs=60.1
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee--------------cCHHHHhccCcEEEEcCCC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV--------------TTMEEAAKEGGIFVTTTGC 413 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v--------------~~Leell~~aDiIi~atgt 413 (718)
.++|+|||.|.+|..+|..|...|.+|+++++++ ........|..+ .+.++ ++.+|+|++++.+
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~ 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARGA-TLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCHH-HHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEChH-HHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc
Confidence 4689999999999999999999999999998753 221222344322 35665 5889999998765
Q ss_pred CCCcCHHHHh----cCCCCeEEEEcCCC
Q psy7896 414 KDIIRGEHFL----QMRDDAIVCNIGHF 437 (718)
Q Consensus 414 ~~lI~~e~l~----~MK~gAiLIN~GRg 437 (718)
..+ .+.++ .++++++++.+.-|
T Consensus 81 ~~~--~~~~~~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 81 PAL--ESVAAGIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp HHH--HHHHGGGSSSCCTTCEEEECCSS
T ss_pred hhH--HHHHHHHHhhCCCCCEEEEECCC
Confidence 322 22333 45678888877655
No 244
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.37 E-value=0.0059 Score=66.60 Aligned_cols=36 Identities=19% Similarity=0.186 Sum_probs=33.0
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.+++|.|||.|.+|..+|..++.+|.+|+++++.+.
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGER 182 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 678999999999999999999999999999987653
No 245
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=96.35 E-value=0.0039 Score=69.31 Aligned_cols=83 Identities=17% Similarity=0.175 Sum_probs=59.0
Q ss_pred hcccccCcEEEEEecChhHHHHHHHHHhCCCEEE-EEecC-----C--cc--HHH------Hh-----------hcCcee
Q psy7896 342 LDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVI-VTEID-----P--IN--ALQ------AS-----------MEGYEV 394 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Vi-v~d~d-----p--~~--al~------a~-----------~~G~~v 394 (718)
.+.+++|+||.|.|+|++|+.+|+.|..+|++|+ +.|.+ | .. .+. .. ..+.++
T Consensus 233 ~g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~ 312 (456)
T 3r3j_A 233 LNDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKY 312 (456)
T ss_dssp TTCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEE
T ss_pred cCCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceE
Confidence 3778999999999999999999999999999986 66632 1 11 111 00 012334
Q ss_pred cCHHHHh-ccCcEEEEcCCCCCCcCHHHHhcC
Q psy7896 395 TTMEEAA-KEGGIFVTTTGCKDIIRGEHFLQM 425 (718)
Q Consensus 395 ~~Leell-~~aDiIi~atgt~~lI~~e~l~~M 425 (718)
.+-++++ -.|||++.|.. .+.|+.+...++
T Consensus 313 v~~~~i~~~~~DI~iPcA~-~~~I~~~na~~l 343 (456)
T 3r3j_A 313 FENQKPWNIPCDIAFPCAT-QNEINENDADLF 343 (456)
T ss_dssp ECSCCGGGSCCSEEEECSC-TTCBCHHHHHHH
T ss_pred eCCccccccCccEEEeCCC-ccchhhHHHHHH
Confidence 4445554 36999998765 468999988887
No 246
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=96.35 E-value=0.0028 Score=74.31 Aligned_cols=88 Identities=22% Similarity=0.215 Sum_probs=61.6
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHH-----------hhcC-------------ce-ecCHHHHhc
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA-----------SMEG-------------YE-VTTMEEAAK 402 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a-----------~~~G-------------~~-v~~Leell~ 402 (718)
=++|+|||.|.+|..+|..+...|.+|+++|+++.....+ ...| .. ..++ +.++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~ 392 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFG 392 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGG
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHC
Confidence 4689999999999999999999999999999987543221 1123 11 2345 6788
Q ss_pred cCcEEEEcCCCCC----CcCHHHHhcCCCCeEEE-EcCC
Q psy7896 403 EGGIFVTTTGCKD----IIRGEHFLQMRDDAIVC-NIGH 436 (718)
Q Consensus 403 ~aDiIi~atgt~~----lI~~e~l~~MK~gAiLI-N~GR 436 (718)
+||+||.+....- .+-.+..+.++++++|+ |++.
T Consensus 393 ~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntSt 431 (715)
T 1wdk_A 393 NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTST 431 (715)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC
Confidence 9999999855321 12223345689999887 6654
No 247
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.34 E-value=0.0028 Score=67.03 Aligned_cols=99 Identities=18% Similarity=0.206 Sum_probs=69.2
Q ss_pred cCcEEEEE-ecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-c----CHHHHhc-----cCcEEEEcCCCCC
Q psy7896 347 AGKVAVVA-GYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-T----TMEEAAK-----EGGIFVTTTGCKD 415 (718)
Q Consensus 347 ~GktVGII-G~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~----~Leell~-----~aDiIi~atgt~~ 415 (718)
.|++|.|+ |.|.||..+++.++.+|++|++++.++.+...+...|... . ++.+.++ ..|+++.+++...
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~~~ 229 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDM 229 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCCchH
Confidence 69999999 7999999999999999999999988765543333344321 1 2333322 4799988877532
Q ss_pred CcCHHHHhcCCCCeEEEEcCCCCccccHHHH
Q psy7896 416 IIRGEHFLQMRDDAIVCNIGHFDCEIQVSWL 446 (718)
Q Consensus 416 lI~~e~l~~MK~gAiLIN~GRgd~Eid~~aL 446 (718)
.+ ...++.++++..++.++.....++...+
T Consensus 230 ~~-~~~~~~l~~~G~iv~~~~~~~~~~~~~~ 259 (346)
T 3fbg_A 230 YY-DDMIQLVKPRGHIATIVAFENDQDLNAL 259 (346)
T ss_dssp HH-HHHHHHEEEEEEEEESSCCSSCBCGGGG
T ss_pred HH-HHHHHHhccCCEEEEECCCCCCCccccc
Confidence 22 3567889999999988765444554433
No 248
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=96.33 E-value=0.071 Score=56.93 Aligned_cols=171 Identities=18% Similarity=0.102 Sum_probs=108.7
Q ss_pred ccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHHHHHHHHHhc
Q psy7896 249 YGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEVAALHLEHLG 328 (718)
Q Consensus 249 ~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i~~~~l~~lg 328 (718)
.|-+||+.|.+.--.. + . -+.|+.. +---.+...++.-+++|++.-.+...=.|+.++-|.+-+
T Consensus 87 ~~kgEsl~DTarvLs~-~--~-D~iviR~-~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~e----------- 150 (323)
T 3gd5_A 87 VGRGEPVRDTARVLGR-Y--V-DGLAIRT-FAQTELEEYAHYAGIPVINALTDHEHPCQVVADLLTIRE----------- 150 (323)
T ss_dssp ----CCHHHHHHHHTT-T--C-SEEEEEC-SSHHHHHHHHHHHCSCEEEEECSSCCHHHHHHHHHHHHH-----------
T ss_pred CCCCCCHHHHHHHHHH-h--C-CEEEEec-CChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHH-----------
Confidence 4667998876654222 2 1 2334432 222233444566678998876666666677777665432
Q ss_pred ccccccchhhhhhhcccccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCcc---HH-H-----HhhcC--ce-ec
Q psy7896 329 VKLTKLTEDQAKYLDIMLAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPIN---AL-Q-----ASMEG--YE-VT 395 (718)
Q Consensus 329 v~~~~~~~~~~~~~g~eL~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~---al-~-----a~~~G--~~-v~ 395 (718)
..| .+.|++|++||= +++....+..+..+|++|.++-+.... .. + +...| +. ..
T Consensus 151 ------------~~g-~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 217 (323)
T 3gd5_A 151 ------------NFG-RLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILR 217 (323)
T ss_dssp ------------HHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred ------------HhC-CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 112 488999999997 468888888899999999997543221 11 0 11224 32 35
Q ss_pred CHHHHhccCcEEEEcC----C------------CCCCcCHHHHhcCCCCeEEEEcCCC--CccccHHHHhc
Q psy7896 396 TMEEAAKEGGIFVTTT----G------------CKDIIRGEHFLQMRDDAIVCNIGHF--DCEIQVSWLDK 448 (718)
Q Consensus 396 ~Leell~~aDiIi~at----g------------t~~lI~~e~l~~MK~gAiLIN~GRg--d~Eid~~aL~~ 448 (718)
+++|+++.+|||.+.. + ...-++.+.++.+|+++++.-++-. +.||+.+-+..
T Consensus 218 d~~eav~~aDvvyt~~wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHclPa~Rg~EI~~eV~d~ 288 (323)
T 3gd5_A 218 DPFEAARGAHILYTDVWTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCLPAHRGEEITDEVMEG 288 (323)
T ss_dssp CHHHHHTTCSEEEECCCC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECSCCCBTTTBCHHHHHS
T ss_pred CHHHHhcCCCEEEEeceecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCCCCCCCceeCHHHhCC
Confidence 8999999999998741 1 1235899999999999999999752 35787665543
No 249
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=96.33 E-value=0.0035 Score=67.68 Aligned_cols=92 Identities=12% Similarity=0.083 Sum_probs=62.4
Q ss_pred ccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCc-------eecCHHHHhccCcEEEEcCCCCCC
Q psy7896 344 IMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGY-------EVTTMEEAAKEGGIFVTTTGCKDI 416 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~-------~v~~Leell~~aDiIi~atgt~~l 416 (718)
.+=++++|+|||+|.+|+.+|+.|... .+|+++++++.++......+. ...+++++++++|+|+.++... +
T Consensus 12 ~~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~-~ 89 (365)
T 2z2v_A 12 IEGRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF-L 89 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHH-H
T ss_pred ccCCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChh-h
Confidence 344689999999999999999999877 899999998876543322221 1134678899999999986532 1
Q ss_pred cCHHHHhcCCCCeEEEEcCCC
Q psy7896 417 IRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 417 I~~e~l~~MK~gAiLIN~GRg 437 (718)
-..-..+.++.|..+++++..
T Consensus 90 ~~~v~~a~l~~G~~~vD~s~~ 110 (365)
T 2z2v_A 90 GFKSIKAAIKSKVDMVDVSFM 110 (365)
T ss_dssp HHHHHHHHHHTTCCEEECCCC
T ss_pred hHHHHHHHHHhCCeEEEccCC
Confidence 011123456778888887753
No 250
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=96.29 E-value=0.087 Score=56.88 Aligned_cols=182 Identities=19% Similarity=0.121 Sum_probs=110.4
Q ss_pred ccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHHHHHHHHHhc
Q psy7896 249 YGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEVAALHLEHLG 328 (718)
Q Consensus 249 ~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i~~~~l~~lg 328 (718)
.|-+||+.|.+.--.. + .. +.|+... ---.+..+++--+++|++.-.+...=.|++++-|.+-+ +.|
T Consensus 105 l~kgEsl~DTarvLs~-~--~D-~IviR~~-~~~~~~~lA~~s~vPVINag~d~~HPtQaLaDl~TI~E--------~~G 171 (353)
T 3sds_A 105 LGVNESLYDTSVVISS-M--VS-CIVARVG-PHSDIANLAKHSSVPVINALCDTFHPLQAIADFLTIHE--------SFA 171 (353)
T ss_dssp -CCSSCHHHHHHHHHT-S--CS-EEEEECS-SHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHH--------HTC
T ss_pred ccCCccHHHHHHHHHH-h--cC-EEEEEeC-ChHHHHHHHhhCCCCEEECCCCCCCcHHHHHHHHHHHH--------HhC
Confidence 4567998887664322 2 22 3334322 22234445566778999875555555677777665532 100
Q ss_pred ccccccchh-hhhhhcccccCcEEEEEecCh-hHHHHHHHHHhCCCEEEEEecCCcc---HH-H---Hh----hcC--ce
Q psy7896 329 VKLTKLTED-QAKYLDIMLAGKVAVVAGYGD-VGKGCAQSLRLFGSRVIVTEIDPIN---AL-Q---AS----MEG--YE 393 (718)
Q Consensus 329 v~~~~~~~~-~~~~~g~eL~GktVGIIG~G~-IG~~vA~~l~~fGa~Viv~d~dp~~---al-~---a~----~~G--~~ 393 (718)
. ..+. ........|.|++|++||=++ +....+..+..||++|.++-+.... .. + .. ..| +.
T Consensus 172 ~----~~~~~~~~~~~~~l~glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~ 247 (353)
T 3sds_A 172 S----QSATHGTHPSSLGLEGLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLT 247 (353)
T ss_dssp ------------CTTCCSCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEE
T ss_pred C----CcccccccccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEE
Confidence 0 0000 000112347999999999875 7888888889999999998543221 11 1 11 112 22
Q ss_pred -ecCHHHHhccCcEEEEcC----C------------CCCCcCHHHHhc--CCCCeEEEEcCCCC-ccccHHHHh
Q psy7896 394 -VTTMEEAAKEGGIFVTTT----G------------CKDIIRGEHFLQ--MRDDAIVCNIGHFD-CEIQVSWLD 447 (718)
Q Consensus 394 -v~~Leell~~aDiIi~at----g------------t~~lI~~e~l~~--MK~gAiLIN~GRgd-~Eid~~aL~ 447 (718)
..+++|+++.+|||.+.+ + ...-|+.+.++. +|++++|.-++-.. .||+.+-+.
T Consensus 248 ~~~d~~eav~~aDVvytd~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcLP~~~~EI~~eV~d 321 (353)
T 3sds_A 248 QTTVPEVAVKDADVIVTDTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCLPRHPEEVSDEVFY 321 (353)
T ss_dssp EESCHHHHTTTCSEEEECCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECSCCCTTTBCHHHHT
T ss_pred EECCHHHHhcCCCEEEeCCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCCCCCCCeECHHHhC
Confidence 358999999999998732 2 124689999998 99999999998543 577755444
No 251
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.28 E-value=0.011 Score=62.80 Aligned_cols=65 Identities=15% Similarity=0.089 Sum_probs=48.9
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHH---hh-----c--C--cee-cCHHHHhccCcEEEEcCC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQA---SM-----E--G--YEV-TTMEEAAKEGGIFVTTTG 412 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a---~~-----~--G--~~v-~~Leell~~aDiIi~atg 412 (718)
.++|+|||.|.+|..+|..+...|. +|.++|+++.+.... .. . . +.. .++++.++.||+|+.+.+
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g 87 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAG 87 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccC
Confidence 4689999999999999999987787 899999988542210 00 1 1 222 578889999999999753
No 252
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.28 E-value=0.0089 Score=72.67 Aligned_cols=35 Identities=20% Similarity=0.281 Sum_probs=32.2
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCC-eEEEeecCc
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDP 302 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv-~VtV~D~dp 302 (718)
.+++|+|||.|+.|+.+|..|++.|. .|+++|..+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~ 221 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQE 221 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 47899999999999999999999999 799999764
No 253
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=96.28 E-value=0.054 Score=57.81 Aligned_cols=184 Identities=18% Similarity=0.098 Sum_probs=117.3
Q ss_pred ccceEEEecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhh
Q psy7896 229 LGVPAINVNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA 308 (718)
Q Consensus 229 l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~A 308 (718)
|+-=++..+.+.+ ..|-+||+.|.+.--.. + . -+.|+... .--.+...++--+++|++...+...=.|+
T Consensus 71 LGg~~i~l~~~~s------s~~kgEsl~DTarvls~-~--~-D~iviR~~-~~~~~~~lA~~~~vPVINa~~~~~HPtQa 139 (321)
T 1oth_A 71 LGGHPCFLTTQDI------HLGVNESLTDTARVLSS-M--A-DAVLARVY-KQSDLDTLAKEASIPIINGLSDLYHPIQI 139 (321)
T ss_dssp TTCEEEEEETTTS------CBTTTBCHHHHHHHHHH-H--C-SEEEEECS-CHHHHHHHHHHCSSCEEESCCSSCCHHHH
T ss_pred cCCeEEEECCCcC------cCCCCCCHHHHHHHHHH-h--C-CEEEEeCC-ChhHHHHHHHhCCCCEEcCCCCCCCcHHH
Confidence 4444555554332 23567998876653222 2 2 23444432 22223334445568999887766666777
Q ss_pred hhhhhhhhHHHHHHHHHHhcccccccchhhhhhhcccccCcEEEEEecCh-hHHHHHHHHHhCCCEEEEEecCCcc---H
Q psy7896 309 SMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGYGD-VGKGCAQSLRLFGSRVIVTEIDPIN---A 384 (718)
Q Consensus 309 vaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~G~-IG~~vA~~l~~fGa~Viv~d~dp~~---a 384 (718)
+++-|.+-+ ..| .+.|++|++||=|+ +.+..+..+..||++|.++-+.... .
T Consensus 140 LaDl~Ti~e-----------------------~~g-~l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~ 195 (321)
T 1oth_A 140 LADYLTLQE-----------------------HYS-SLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDAS 195 (321)
T ss_dssp HHHHHHHHH-----------------------HHS-CCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHH
T ss_pred HHHHHHHHH-----------------------HhC-CcCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHH
Confidence 777666532 112 58999999999865 8888888888999999998543321 1
Q ss_pred H-HH-----hhcC--ce-ecCHHHHhccCcEEEEcC----C------------CCCCcCHHHHhcCCCCeEEEEcCCCC-
Q psy7896 385 L-QA-----SMEG--YE-VTTMEEAAKEGGIFVTTT----G------------CKDIIRGEHFLQMRDDAIVCNIGHFD- 438 (718)
Q Consensus 385 l-~a-----~~~G--~~-v~~Leell~~aDiIi~at----g------------t~~lI~~e~l~~MK~gAiLIN~GRgd- 438 (718)
. +. ...| +. ..+++|+++.+|+|.+-+ + ...-+|.+.++.+|+++++.-++-..
T Consensus 196 ~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~w~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~lP~~r 275 (321)
T 1oth_A 196 VTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCLPRKP 275 (321)
T ss_dssp HHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECSCCCT
T ss_pred HHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEeccccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECCCCCCC
Confidence 1 10 1124 33 468999999999999832 2 12458999999999999999997532
Q ss_pred ccccHHHHh
Q psy7896 439 CEIQVSWLD 447 (718)
Q Consensus 439 ~Eid~~aL~ 447 (718)
.||+.+-+.
T Consensus 276 ~EI~~eV~d 284 (321)
T 1oth_A 276 EEVDDEVFY 284 (321)
T ss_dssp TTBCHHHHT
T ss_pred cccCHHHhC
Confidence 677765444
No 254
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.27 E-value=0.0033 Score=66.53 Aligned_cols=91 Identities=15% Similarity=0.137 Sum_probs=67.5
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhcCce-ec-----CHHHHhc------cCcEEEEcCC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASMEGYE-VT-----TMEEAAK------EGGIFVTTTG 412 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~G~~-v~-----~Leell~------~aDiIi~atg 412 (718)
-.|.+|.|+|.|.||...++.++.+|+ +|++++.++.+...+...|.. +. ++.+.++ ..|+++.+.+
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g 244 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGG 244 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 368999999999999999999999999 899998877654333344543 11 2333221 4799998888
Q ss_pred CCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 413 CKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
....+ ...++.++++..++.+|..
T Consensus 245 ~~~~~-~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 245 DVHTF-AQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp CTTHH-HHHHHHEEEEEEEEECCCC
T ss_pred ChHHH-HHHHHHHhcCCEEEEeccc
Confidence 75443 4678899999999999864
No 255
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.27 E-value=0.0055 Score=66.33 Aligned_cols=94 Identities=21% Similarity=0.283 Sum_probs=67.1
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhcCcee------cCHHHHhc------cCcEEEEcC
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASMEGYEV------TTMEEAAK------EGGIFVTTT 411 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~G~~v------~~Leell~------~aDiIi~at 411 (718)
--.|.+|.|+|.|.||..+++.++.+|+ +|++++.++.+...+...|... .++.+.++ ..|+++-++
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~ 290 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEAT 290 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECC
Confidence 3468999999999999999999999999 8999988776544344445431 12333221 489999988
Q ss_pred CCCCCcCHHHHhcC----CCCeEEEEcCCCC
Q psy7896 412 GCKDIIRGEHFLQM----RDDAIVCNIGHFD 438 (718)
Q Consensus 412 gt~~lI~~e~l~~M----K~gAiLIN~GRgd 438 (718)
|.....-...++.+ +++..++.+|...
T Consensus 291 g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~ 321 (404)
T 3ip1_A 291 GVPQLVWPQIEEVIWRARGINATVAIVARAD 321 (404)
T ss_dssp SCHHHHHHHHHHHHHHCSCCCCEEEECSCCC
T ss_pred CCcHHHHHHHHHHHHhccCCCcEEEEeCCCC
Confidence 87522223345556 9999999998653
No 256
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.26 E-value=0.0029 Score=67.44 Aligned_cols=91 Identities=19% Similarity=0.157 Sum_probs=66.2
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhcCce-e-----cCHHHHhc-----cCcEEEEcCCC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASMEGYE-V-----TTMEEAAK-----EGGIFVTTTGC 413 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~G~~-v-----~~Leell~-----~aDiIi~atgt 413 (718)
-.|++|.|+|.|.||..+++.++.+|+ +|++++.++.+...+...|.. + .++.+.++ ..|+++.+++.
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~ 268 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGS 268 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCC
Confidence 368999999999999999999999999 699998877654333334432 1 12333332 37999988876
Q ss_pred CCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 414 KDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 414 ~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
...+ ...++.++++..++.+|..
T Consensus 269 ~~~~-~~~~~~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 269 PEIL-KQGVDALGILGKIAVVGAP 291 (371)
T ss_dssp HHHH-HHHHHTEEEEEEEEECCCC
T ss_pred HHHH-HHHHHHHhcCCEEEEeCCC
Confidence 3222 3568889999999999864
No 257
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.25 E-value=0.0047 Score=65.24 Aligned_cols=91 Identities=15% Similarity=0.101 Sum_probs=66.0
Q ss_pred cCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-e------cCHHHHhc-----cCcEEEEcCCC
Q psy7896 347 AGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-V------TTMEEAAK-----EGGIFVTTTGC 413 (718)
Q Consensus 347 ~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v------~~Leell~-----~aDiIi~atgt 413 (718)
.|++|.|+|. |.||+.+++.++.+|++|+++++++.+...+...|.. + .++.+.++ ..|+++.+++.
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 6899999999 8999999999999999999998877654333333432 1 13444443 47999888775
Q ss_pred CCCcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 414 KDIIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 414 ~~lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
... -...++.|+++..++++|...
T Consensus 249 ~~~-~~~~~~~l~~~G~iv~~g~~~ 272 (347)
T 2hcy_A 249 EAA-IEASTRYVRANGTTVLVGMPA 272 (347)
T ss_dssp HHH-HHHHTTSEEEEEEEEECCCCT
T ss_pred HHH-HHHHHHHHhcCCEEEEEeCCC
Confidence 322 235678889999999998653
No 258
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.23 E-value=0.006 Score=65.64 Aligned_cols=92 Identities=28% Similarity=0.393 Sum_probs=66.6
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhcCceec-----C-HHHHhc------cCcEEEEcCC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASMEGYEVT-----T-MEEAAK------EGGIFVTTTG 412 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~G~~v~-----~-Leell~------~aDiIi~atg 412 (718)
-.|++|.|+|.|.||...++.++.+|+ +|++++.++.+...+...|..+. + +.+.++ ..|+++-++|
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G 263 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVG 263 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCC
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEEECCC
Confidence 368999999999999999999999999 79999887765444444554432 1 333221 4699998887
Q ss_pred CCCC--------------cCHHHHhcCCCCeEEEEcCCC
Q psy7896 413 CKDI--------------IRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~~l--------------I~~e~l~~MK~gAiLIN~GRg 437 (718)
.... .-.+.++.++++..++.+|..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~ 302 (398)
T 1kol_A 264 FEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLY 302 (398)
T ss_dssp TTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCC
T ss_pred CcccccccccccccchHHHHHHHHHHHhcCCEEEEeccc
Confidence 6421 224667888999999988864
No 259
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=96.22 E-value=0.0029 Score=65.82 Aligned_cols=89 Identities=11% Similarity=0.120 Sum_probs=61.9
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec--CHHHHhccCcEEEEcCCCCCCcCHHHHh
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT--TMEEAAKEGGIFVTTTGCKDIIRGEHFL 423 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~--~Leell~~aDiIi~atgt~~lI~~e~l~ 423 (718)
-.|++|.|+|.|.||..+++.++.+|++|++++ ++.+...+...|...+ +.+++-+..|+++-+.|.... ...++
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~d~~g~~~~--~~~~~ 217 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNSQNA--AALVP 217 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCCSCEEEEECC---------TTGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhCCCccEEEECCCchhH--HHHHH
Confidence 369999999999999999999999999999998 6665444444454321 222222357899888776544 45788
Q ss_pred cCCCCeEEEEcCCC
Q psy7896 424 QMRDDAIVCNIGHF 437 (718)
Q Consensus 424 ~MK~gAiLIN~GRg 437 (718)
.++++..++.+|..
T Consensus 218 ~l~~~G~~v~~g~~ 231 (315)
T 3goh_A 218 SLKANGHIICIQDR 231 (315)
T ss_dssp GEEEEEEEEEECCC
T ss_pred HhcCCCEEEEEeCC
Confidence 99999999998653
No 260
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.22 E-value=0.014 Score=58.58 Aligned_cols=38 Identities=13% Similarity=-0.040 Sum_probs=33.3
Q ss_pred ccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 344 IMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
..+.+++|.|||.|.+|..+|..+..+| +|+++.+.+.
T Consensus 137 ~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 137 YELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp GGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred hhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 3467999999999999999999999999 9999876553
No 261
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.21 E-value=0.0043 Score=66.97 Aligned_cols=92 Identities=25% Similarity=0.305 Sum_probs=67.0
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhcCceec-----CH-HHHhc------cCcEEEEcCC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASMEGYEVT-----TM-EEAAK------EGGIFVTTTG 412 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~G~~v~-----~L-eell~------~aDiIi~atg 412 (718)
-.|++|.|+|.|.||..+++.++.+|+ +|+++++++.+...+...|..+. ++ .+.++ ..|+++-+++
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g 263 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAVG 263 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEEECCC
Confidence 368999999999999999999999999 99999987765444444454332 11 22221 4799998887
Q ss_pred CCCC-------------cCHHHHhcCCCCeEEEEcCCC
Q psy7896 413 CKDI-------------IRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~~l-------------I~~e~l~~MK~gAiLIN~GRg 437 (718)
.... .-.+.++.++++..++.+|..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~ 301 (398)
T 2dph_A 264 FEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIY 301 (398)
T ss_dssp TTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCC
T ss_pred CccccccccccccccHHHHHHHHHHHhcCCEEEEeccc
Confidence 6431 224567889999999988864
No 262
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.20 E-value=0.0031 Score=70.03 Aligned_cols=91 Identities=18% Similarity=0.182 Sum_probs=62.5
Q ss_pred ccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhh--cCceec--CH-HHHhccCcEEEEcCCCCCCcC
Q psy7896 344 IMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASM--EGYEVT--TM-EEAAKEGGIFVTTTGCKDIIR 418 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~--~G~~v~--~L-eell~~aDiIi~atgt~~lI~ 418 (718)
.+++||+|.|||.|++|.+.++.|...|++|++++.+....++... .++.+. .+ ++.+..+|+|+.+|+.. -+|
T Consensus 8 ~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at~~~-~~n 86 (457)
T 1pjq_A 8 CQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDD-TVN 86 (457)
T ss_dssp ECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCH-HHH
T ss_pred EECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcCCCH-HHH
Confidence 4689999999999999999999999999999999876544443322 233321 21 24466899999988764 234
Q ss_pred HHHHhcCCCCeEEEEcC
Q psy7896 419 GEHFLQMRDDAIVCNIG 435 (718)
Q Consensus 419 ~e~l~~MK~gAiLIN~G 435 (718)
.......+.-.+.||+.
T Consensus 87 ~~i~~~a~~~~i~vn~~ 103 (457)
T 1pjq_A 87 QRVSDAAESRRIFCNVV 103 (457)
T ss_dssp HHHHHHHHHTTCEEEET
T ss_pred HHHHHHHHHcCCEEEEC
Confidence 44444444444556653
No 263
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=96.18 E-value=0.0061 Score=65.80 Aligned_cols=84 Identities=17% Similarity=0.094 Sum_probs=58.5
Q ss_pred cEEEEEecChhHHHHHHHHHh-CCCEEEEEe---cCCccHHHHh-hc----------C--c--------eecCHHHHhcc
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRL-FGSRVIVTE---IDPINALQAS-ME----------G--Y--------EVTTMEEAAKE 403 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~-fGa~Viv~d---~dp~~al~a~-~~----------G--~--------~v~~Leell~~ 403 (718)
++|+|||.|.+|..+|..|.. -|.+|++++ +++.....+. .. + . ...+++++++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 589999999999999999977 499999998 5443322211 11 2 1 12367888999
Q ss_pred CcEEEEcCCCCCCcCHHHH----hcCCCCeEEEEc
Q psy7896 404 GGIFVTTTGCKDIIRGEHF----LQMRDDAIVCNI 434 (718)
Q Consensus 404 aDiIi~atgt~~lI~~e~l----~~MK~gAiLIN~ 434 (718)
+|+|++++.+... .+.+ ..++++.+++..
T Consensus 83 aD~Vilav~~~~~--~~v~~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAFAH--EGYFQAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGGGH--HHHHHHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchHHH--HHHHHHHHhhCCCCcEEEEc
Confidence 9999998766432 2333 345778888874
No 264
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.18 E-value=0.0077 Score=64.18 Aligned_cols=98 Identities=20% Similarity=0.169 Sum_probs=65.0
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHH-----------hhcC--------------c-eecCHHHHh
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA-----------SMEG--------------Y-EVTTMEEAA 401 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a-----------~~~G--------------~-~v~~Leell 401 (718)
-++|+|||.|.+|+.+|..+...|.+|+++|++|.....+ ...| . ...++++++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~ 85 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHh
Confidence 4689999999999999999999999999999887531100 0111 1 134788999
Q ss_pred ccCcEEEEcC-CCCCC---cCHHHHhcCCCCeEEEEcCCCCccccHHHHhc
Q psy7896 402 KEGGIFVTTT-GCKDI---IRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDK 448 (718)
Q Consensus 402 ~~aDiIi~at-gt~~l---I~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~ 448 (718)
+.+|+|+-+. ++-.+ +-++.-+.+++++||.....+ +.+..|.+
T Consensus 86 ~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs---l~is~ia~ 133 (319)
T 3ado_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC---LLPSKLFT 133 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS---CCHHHHHT
T ss_pred ccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh---ccchhhhh
Confidence 9999999874 33111 222233457899988644332 45555554
No 265
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=96.18 E-value=0.0069 Score=63.51 Aligned_cols=65 Identities=25% Similarity=0.241 Sum_probs=51.5
Q ss_pred cEEEEEecChhHHHHHHHHHhC-CCEEE-EEecCCccHHH-HhhcCceecCHHHHhc--cCcEEEEcCCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLF-GSRVI-VTEIDPINALQ-ASMEGYEVTTMEEAAK--EGGIFVTTTGC 413 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~f-Ga~Vi-v~d~dp~~al~-a~~~G~~v~~Leell~--~aDiIi~atgt 413 (718)
.+|||||+|.||+..++.+... +++++ ++|+++.+... +...|..+.+++++++ +.|+|++++.+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~ 73 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCEVRTIDAIEAAADIDAVVICTPT 73 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCEECCHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCCcCCHHHHhcCCCCCEEEEeCCc
Confidence 5899999999999999999876 77876 68888765433 2234555778999998 79999998765
No 266
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.17 E-value=0.0049 Score=64.57 Aligned_cols=90 Identities=21% Similarity=0.256 Sum_probs=64.6
Q ss_pred ccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-e------cCHHHHhc-----cCcEEEEcCC
Q psy7896 346 LAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-V------TTMEEAAK-----EGGIFVTTTG 412 (718)
Q Consensus 346 L~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v------~~Leell~-----~aDiIi~atg 412 (718)
-.|++|.|.|. |.||+.+++.++.+|++|+++++++.+...+...|.. + .++.+.+. ..|+++.+.|
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 223 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG 223 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 36899999998 9999999999999999999998876543323223431 1 23333332 3688888877
Q ss_pred CCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 413 CKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
... -...++.|+++..++.+|..
T Consensus 224 ~~~--~~~~~~~l~~~G~~v~~g~~ 246 (333)
T 1v3u_A 224 GEF--LNTVLSQMKDFGKIAICGAI 246 (333)
T ss_dssp HHH--HHHHHTTEEEEEEEEECCCC
T ss_pred hHH--HHHHHHHHhcCCEEEEEecc
Confidence 532 34567888999999988864
No 267
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=96.16 E-value=0.077 Score=56.77 Aligned_cols=178 Identities=14% Similarity=0.042 Sum_probs=108.7
Q ss_pred ccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHHHHHHHHHhc
Q psy7896 249 YGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEVAALHLEHLG 328 (718)
Q Consensus 249 ~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i~~~~l~~lg 328 (718)
.|-+||+.|.+.--.. + . -+.|+.. +-.-.+...++--+++|++.-.+...=.|+.++-|.+.++ .|
T Consensus 84 ~~kgEsl~DTarvls~-~--~-D~iviR~-~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~e~--------~g 150 (328)
T 3grf_A 84 VGGKETVQDTAEVFSR-M--V-DICTARL-ATKEMMREMAQHASVPCINALDDFGHPLQMVCDFMTIKEK--------FT 150 (328)
T ss_dssp -----CHHHHHHHHTT-T--C-SEEEEEC-SSHHHHHHHHHHCSSCEEESSCSSCCHHHHHHHHHHHHHH--------HH
T ss_pred CCCCCCHHHHHHHHHh-h--C-CEEEEec-CChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHHH--------hC
Confidence 4667998886653222 2 1 2334432 2223334445666789988766655556777776655320 00
Q ss_pred ccccccchhhhhhhcccccCcEEEEEecC--hhHHHHHHHHHhCCCEEEEEecCCcc-----HH--HH----hh--cCce
Q psy7896 329 VKLTKLTEDQAKYLDIMLAGKVAVVAGYG--DVGKGCAQSLRLFGSRVIVTEIDPIN-----AL--QA----SM--EGYE 393 (718)
Q Consensus 329 v~~~~~~~~~~~~~g~eL~GktVGIIG~G--~IG~~vA~~l~~fGa~Viv~d~dp~~-----al--~a----~~--~G~~ 393 (718)
. .......+.|++|++||=+ ++.+..+..+..||++|.++-+.... .. .+ .. .|..
T Consensus 151 ~---------~~~~~~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (328)
T 3grf_A 151 A---------AGEFSNGFKGIKFAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGS 221 (328)
T ss_dssp H---------TTCCTTTGGGCCEEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCE
T ss_pred C---------ccccccccCCcEEEEeCCCCcchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCe
Confidence 0 0000125899999999987 78899999999999999998543222 11 01 11 3532
Q ss_pred ---ecCHHHHhccCcEEEEcC----C-------------CCCCcCHHHHhcCCCCeEEEEcCC--CCccccHHHHhc
Q psy7896 394 ---VTTMEEAAKEGGIFVTTT----G-------------CKDIIRGEHFLQMRDDAIVCNIGH--FDCEIQVSWLDK 448 (718)
Q Consensus 394 ---v~~Leell~~aDiIi~at----g-------------t~~lI~~e~l~~MK~gAiLIN~GR--gd~Eid~~aL~~ 448 (718)
..+++|+++.+|||.+.+ + ...-++.+.++.+|+++++.-++- -+.||+.+-+..
T Consensus 222 v~~~~d~~eav~~aDvvytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~lPa~Rg~EI~~eV~d~ 298 (328)
T 3grf_A 222 IKIFHDCKKGCEGVDVVYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCLPATRGEEQTASVIDG 298 (328)
T ss_dssp EEEESSHHHHHTTCSEEEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCTTTTBCHHHHTS
T ss_pred EEEEcCHHHHhcCCCEEEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCCCCCCCCccCHHHhCC
Confidence 358999999999998731 2 123489999999999999999975 236787654443
No 268
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.15 E-value=0.0084 Score=64.44 Aligned_cols=68 Identities=16% Similarity=0.191 Sum_probs=48.9
Q ss_pred ccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee------cCHHHHhccCcEEEEcC
Q psy7896 344 IMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV------TTMEEAAKEGGIFVTTT 411 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v------~~Leell~~aDiIi~at 411 (718)
..+.+++|+|+|.|.+|+.+++.++.+|.+|+++|.+|........+.+.+ ..+.++++.+|+|+.-.
T Consensus 8 ~~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~~~ 81 (377)
T 3orq_A 8 KLKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITYEF 81 (377)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCSEEEESS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCCcceecc
Confidence 346799999999999999999999999999999988765321111121211 12556778899885533
No 269
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.15 E-value=0.01 Score=64.00 Aligned_cols=35 Identities=40% Similarity=0.446 Sum_probs=32.7
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
+++|.|||.|.+|..+|..++.+|.+|++++..+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~ 186 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPR 186 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCc
Confidence 89999999999999999999999999999987653
No 270
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=96.15 E-value=0.092 Score=57.90 Aligned_cols=186 Identities=18% Similarity=0.201 Sum_probs=112.3
Q ss_pred ccceEEEecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCC-CChh------HHHHHH---hc-----CC
Q psy7896 229 LGVPAINVNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGD-VGKG------CAQSLR---LF-----GS 293 (718)
Q Consensus 229 l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~-vG~~------~A~aLr---a~-----Gv 293 (718)
|+-=+++.+.+.+ ..|-+||+.|.+.--.. + --+.|+.... .|.+ .|.++. .. .+
T Consensus 85 LGg~vi~l~~~~s------s~~kGEsl~DTarvLs~-y---~D~IviRh~~~~g~~~~~~~~lA~~~~~~~~~~~~~~~~ 154 (418)
T 2yfk_A 85 LGLEVQDLDEGKS------QISHGETVRETANMISF-M---ADIIGIRDDMYIGKGNAYMHEVSESVQEGYKDGVLEQRP 154 (418)
T ss_dssp HTCEEEEECC--------------CHHHHHHHHTTT-T---EEEEEEEECSSTTHHHHHHHHHHHHHHHHHHTTSCSSCC
T ss_pred CCCeEEecCCCcc------cCCCCcCHHHHHHHHHH-h---CcEEEEecccccCcchHHHHHHHHHHHhhhcccccCCCC
Confidence 4455666655432 23677999886654222 1 2455665332 1222 222221 22 45
Q ss_pred eEEEeecCchhhhhhhhhhhhhhHHHHHHHHHHhcccccccchhhhhhhcc--cccCcEEEEEe-----cCh---hHHHH
Q psy7896 294 RVIVTEIDPINALQASMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYLDI--MLAGKVAVVAG-----YGD---VGKGC 363 (718)
Q Consensus 294 ~VtV~D~dp~r~v~AvaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~--eL~GktVGIIG-----~G~---IG~~v 363 (718)
+|++...+...=.|++++-|.+-+ ..|. .|+|++|++|| +|+ +.+..
T Consensus 155 PVINa~~~~~HPtQaLaDl~TI~E-----------------------~~G~l~~l~Glkva~vgd~~~s~Gd~nnVa~Sl 211 (418)
T 2yfk_A 155 TLVNLQCDIDHPTQAMADALHLIH-----------------------EFGGIENLKGKKVAMTWAYSPSYGKPLSVPQGI 211 (418)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHH-----------------------HTTSSGGGTTCEEEEECCCCSSSCCCSHHHHHH
T ss_pred eEEeCCCCccChHHHHHHHHHHHH-----------------------HhCCccccCCCEEEEEeccccccCccchHHHHH
Confidence 688877766666777777665532 1232 28899999997 454 99999
Q ss_pred HHHHHhCCCEEEEEecCCc---cHH-H-----HhhcCc--e-ecCHHHHhccCcEEEEcC----------------C---
Q psy7896 364 AQSLRLFGSRVIVTEIDPI---NAL-Q-----ASMEGY--E-VTTMEEAAKEGGIFVTTT----------------G--- 412 (718)
Q Consensus 364 A~~l~~fGa~Viv~d~dp~---~al-~-----a~~~G~--~-v~~Leell~~aDiIi~at----------------g--- 412 (718)
+..+..||++|.++-+... +.. + +...|. . ..+++|+++.+|||.+.+ |
T Consensus 212 i~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~~eav~~ADVVytd~W~sm~~Q~ER~~~~~~g~~~ 291 (418)
T 2yfk_A 212 VGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSMAEAFKDADVVYPKSWAPFAAMEKRTELYGNGDQA 291 (418)
T ss_dssp HHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEESCHHHHHTTCSEEEECCCCCHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEEccccchhHHHHHhhhhccccch
Confidence 9999999999999855322 111 1 112352 3 467999999999999842 1
Q ss_pred ----------------CCCCcCHHHHhcCCC-CeEEEEcCCC--------CccccHHHHh
Q psy7896 413 ----------------CKDIIRGEHFLQMRD-DAIVCNIGHF--------DCEIQVSWLD 447 (718)
Q Consensus 413 ----------------t~~lI~~e~l~~MK~-gAiLIN~GRg--------d~Eid~~aL~ 447 (718)
....+|.+.++.+|+ ++++.-++-. ..||+.+-+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~y~vt~elm~~ak~~dai~MHcLPa~r~~~~~rg~EIt~eV~d 351 (418)
T 2yfk_A 292 GIDQLEQELLSQNKKHKDWECTEELMKTTKDGKALYMHCLPADITGVSCEEGEVEASVFD 351 (418)
T ss_dssp HHHHHHHHHHHHHGGGTTCCBCHHHHHTSGGGCCEECCCSCCCEETTTBSSCSEEHHHHH
T ss_pred hhhhhhhhhhhHHHHHhhcCCCHHHHHhcCCCCeEEECCCCCCCccCCCCCCEEChHHhC
Confidence 123588999999986 8999888754 3467655443
No 271
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.13 E-value=0.02 Score=66.44 Aligned_cols=116 Identities=20% Similarity=0.146 Sum_probs=73.4
Q ss_pred cCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhh----hhhhhhhhHH---HHHHHHHHh-ccccccc----
Q psy7896 267 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA----SMEGYELDEE---VAALHLEHL-GVKLTKL---- 334 (718)
Q Consensus 267 ~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~A----vaeGf~L~r~---i~~~~l~~l-gv~~~~~---- 334 (718)
...++|+|||.|+.|+.+|..|+++|+.|+++|..+...-+. ...++...++ .....+..+ ++.+...
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 468 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESPMT 468 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSCCCC
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECCeec
Confidence 356799999999999999999999999999999865332111 1112211111 111112222 2222100
Q ss_pred ------------------chh--------hh--------------hh-hcccccCcEEEEEe--cChhHHHHHHHHHhCC
Q psy7896 335 ------------------TED--------QA--------------KY-LDIMLAGKVAVVAG--YGDVGKGCAQSLRLFG 371 (718)
Q Consensus 335 ------------------~~~--------~~--------------~~-~g~eL~GktVGIIG--~G~IG~~vA~~l~~fG 371 (718)
.+. .. .+ .+....|++|.||| .|.+|..+|..+..+|
T Consensus 469 ~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g 548 (690)
T 3k30_A 469 GDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKG 548 (690)
T ss_dssp HHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTT
T ss_pred HHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCC
Confidence 000 00 00 12234689999999 8999999999999999
Q ss_pred CEEEEEecCCc
Q psy7896 372 SRVIVTEIDPI 382 (718)
Q Consensus 372 a~Viv~d~dp~ 382 (718)
.+|++++..+.
T Consensus 549 ~~Vtlv~~~~~ 559 (690)
T 3k30_A 549 YEVSIVTPGAQ 559 (690)
T ss_dssp CEEEEEESSSS
T ss_pred CeeEEEecccc
Confidence 99999887653
No 272
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.12 E-value=0.01 Score=65.02 Aligned_cols=34 Identities=18% Similarity=0.093 Sum_probs=31.6
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
.++|.|||.|.||..+|..++.+|.+|++++..+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 180 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD 180 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeec
Confidence 6799999999999999999999999999988654
No 273
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.12 E-value=0.011 Score=61.67 Aligned_cols=86 Identities=15% Similarity=0.079 Sum_probs=59.9
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee---------------cCHHHHhccCcEEEEcCCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV---------------TTMEEAAKEGGIFVTTTGC 413 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v---------------~~Leell~~aDiIi~atgt 413 (718)
++|+|||.|.+|..+|..|..-|.+|+++++++...+ ...|..+ .+.++ ++.+|+|++++..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~~~i--~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk~ 79 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRDYEAI--AGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLKT 79 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTTHHHH--HHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCCG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCcHHHH--HhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecCC
Confidence 5799999999999999999999999999998763222 2233321 23444 6789999998766
Q ss_pred CCCcCH-HHH-hcCCCCeEEEEcCCC
Q psy7896 414 KDIIRG-EHF-LQMRDDAIVCNIGHF 437 (718)
Q Consensus 414 ~~lI~~-e~l-~~MK~gAiLIN~GRg 437 (718)
..+-.. +.+ ..++++.+++.+.-|
T Consensus 80 ~~~~~~l~~l~~~l~~~~~iv~l~nG 105 (312)
T 3hn2_A 80 FANSRYEELIRPLVEEGTQILTLQNG 105 (312)
T ss_dssp GGGGGHHHHHGGGCCTTCEEEECCSS
T ss_pred CCcHHHHHHHHhhcCCCCEEEEecCC
Confidence 543221 122 356788888887665
No 274
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=96.11 E-value=0.01 Score=62.11 Aligned_cols=64 Identities=16% Similarity=0.282 Sum_probs=47.3
Q ss_pred cEEEEEecChhHHHHHHHHHhCC--CEEEEEecCCccHHHHh---hc-------Cce--ecCHHHHhccCcEEEEcCCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFG--SRVIVTEIDPINALQAS---ME-------GYE--VTTMEEAAKEGGIFVTTTGC 413 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fG--a~Viv~d~dp~~al~a~---~~-------G~~--v~~Leell~~aDiIi~atgt 413 (718)
++|+|||.|.+|..+|..+...| .+|.++|+++.+..... .+ ... ..+. +.++.+|+|+++.+.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~ 79 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGN 79 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCC
Confidence 58999999999999999998777 68999998875431111 10 122 2455 778999999998765
No 275
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.10 E-value=0.018 Score=59.93 Aligned_cols=36 Identities=22% Similarity=0.172 Sum_probs=31.9
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
+.+++|.|||.|.+|..+|..+..+|.+|+++++.+
T Consensus 164 ~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 164 FNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp SCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred cCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC
Confidence 468999999999999999999999999999987655
No 276
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.10 E-value=0.022 Score=59.25 Aligned_cols=95 Identities=18% Similarity=0.241 Sum_probs=64.1
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHh------hcCceecCHHHHhccCcEEEEcCCC--
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQAS------MEGYEVTTMEEAAKEGGIFVTTTGC-- 413 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~------~~G~~v~~Leell~~aDiIi~atgt-- 413 (718)
+.++.|+++.|+|.|-.+++++..|...|+ +|+++++++.++.+.. ..+..+....+.++++|+||.+|.-
T Consensus 120 g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm 199 (269)
T 3tum_A 120 GFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGM 199 (269)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTC
T ss_pred CCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCcccc
Confidence 356689999999999999999999999997 7999998876643211 1122222233445678988887532
Q ss_pred ---CC-CcCHHHHhcCCCCeEEEEcCCC
Q psy7896 414 ---KD-IIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 414 ---~~-lI~~e~l~~MK~gAiLIN~GRg 437 (718)
.. -++...++.++++.++.++-..
T Consensus 200 ~~~~~~p~~~~~~~~l~~~~~v~D~vY~ 227 (269)
T 3tum_A 200 GTRAELPLSAALLATLQPDTLVADVVTS 227 (269)
T ss_dssp STTCCCSSCHHHHHTCCTTSEEEECCCS
T ss_pred CCCCCCCCChHHHhccCCCcEEEEEccC
Confidence 11 1455556677777777766553
No 277
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=96.08 E-value=0.011 Score=62.27 Aligned_cols=88 Identities=17% Similarity=0.209 Sum_probs=58.1
Q ss_pred cEEEEEecChhHHHHHHHHHhCCC--EEEEEecCCccHHHHh---hc------C--ceecCHHHHhccCcEEEEcCCCCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGS--RVIVTEIDPINALQAS---ME------G--YEVTTMEEAAKEGGIFVTTTGCKD 415 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa--~Viv~d~dp~~al~a~---~~------G--~~v~~Leell~~aDiIi~atgt~~ 415 (718)
++|+|||.|.+|..+|..+...|. +|.++|+++.+..... .+ . +...+ .+.++.+|+|+++.+...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 479999999999999999988787 9999998875322111 11 1 12234 456789999999866432
Q ss_pred C--------------cCHHHHhcC---CCCeEEEEcCCC
Q psy7896 416 I--------------IRGEHFLQM---RDDAIVCNIGHF 437 (718)
Q Consensus 416 l--------------I~~e~l~~M---K~gAiLIN~GRg 437 (718)
. +-.+.+..+ .+++++++++-.
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp 118 (319)
T 1a5z_A 80 KPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNP 118 (319)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCc
Confidence 1 012333333 578888887553
No 278
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=96.07 E-value=0.1 Score=56.33 Aligned_cols=171 Identities=12% Similarity=0.016 Sum_probs=110.0
Q ss_pred ccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHHHHHHHHHhc
Q psy7896 249 YGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEVAALHLEHLG 328 (718)
Q Consensus 249 ~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i~~~~l~~lg 328 (718)
.|-+||+.|.+.--.. + .. +.|+.. +.--.+...++--+++|++.-.+...=.|+.++-|.+-+
T Consensus 80 l~kgEsl~DTarvLs~-y--~D-~IviR~-~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~TI~E----------- 143 (355)
T 4a8p_A 80 LGGHETIEDTSRVLSR-L--VD-ILMARV-ERHHSIVDLANCATIPVINGMSDYNHPTQELGDLCTMVE----------- 143 (355)
T ss_dssp BTTTBCHHHHHHHHTT-T--CS-EEEEEC-SSHHHHHHHHHHCSSCEEECCCSSCCHHHHHHHHHHHHH-----------
T ss_pred CCCCcCHHHHHHHHHH-h--CC-EEEEec-CcHHHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHH-----------
Confidence 5678999887654322 2 22 334432 222333344566678998875555555666666655422
Q ss_pred ccccccchhhhhhh--cccccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCcc---HH-H-----HhhcCce---
Q psy7896 329 VKLTKLTEDQAKYL--DIMLAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPIN---AL-Q-----ASMEGYE--- 393 (718)
Q Consensus 329 v~~~~~~~~~~~~~--g~eL~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~---al-~-----a~~~G~~--- 393 (718)
.. |..+.|++|++||= +++....+..+..||++|.++-+.... .. + +...|..
T Consensus 144 ------------~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~ 211 (355)
T 4a8p_A 144 ------------HLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLV 211 (355)
T ss_dssp ------------TCCTTCCGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEE
T ss_pred ------------HhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEE
Confidence 12 33588999999997 568888899999999999998543221 11 0 1123432
Q ss_pred ecCHHHHhccCcEEEEcC----C-------------C-CCCcCHHHHhcCCCCeEEEEcCCC--CccccHHHHhc
Q psy7896 394 VTTMEEAAKEGGIFVTTT----G-------------C-KDIIRGEHFLQMRDDAIVCNIGHF--DCEIQVSWLDK 448 (718)
Q Consensus 394 v~~Leell~~aDiIi~at----g-------------t-~~lI~~e~l~~MK~gAiLIN~GRg--d~Eid~~aL~~ 448 (718)
..+++ +++.+|||.+-. | . ..-+|.+.++.+|++++|.-++-. +.||+.+-+..
T Consensus 212 ~~d~~-av~~aDVVytd~w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~eV~d~ 285 (355)
T 4a8p_A 212 TDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDEVIDG 285 (355)
T ss_dssp ECCGG-GGTTCSEEEECCSSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSCCCBTTTBCHHHHTS
T ss_pred ECCHH-HHcCCCEEEecccccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCCCCCCCeeCHHHhCC
Confidence 35788 999999998721 1 1 245899999999999999999852 35787654443
No 279
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=96.07 E-value=0.0044 Score=68.93 Aligned_cols=91 Identities=18% Similarity=0.244 Sum_probs=60.0
Q ss_pred hcccccCcEEEEEecChhHHHHHHHHHhCCCEEEE-Ee-------cCCc----c--HHHHh--hc-----------Ccee
Q psy7896 342 LDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIV-TE-------IDPI----N--ALQAS--ME-----------GYEV 394 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv-~d-------~dp~----~--al~a~--~~-----------G~~v 394 (718)
.|.+++|++|.|.|+|++|+.+|+.|..+|++|+. .| .+.+ . .+... .. +.+.
T Consensus 224 ~G~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~ 303 (449)
T 1bgv_A 224 ENDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQF 303 (449)
T ss_dssp TTCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEE
T ss_pred ccCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEE
Confidence 37789999999999999999999999999999885 55 2222 1 11110 00 1222
Q ss_pred cCHHHHh-ccCcEEEEcCCCCCCcCHHHHhcCCC-CeEEEE
Q psy7896 395 TTMEEAA-KEGGIFVTTTGCKDIIRGEHFLQMRD-DAIVCN 433 (718)
Q Consensus 395 ~~Leell-~~aDiIi~atgt~~lI~~e~l~~MK~-gAiLIN 433 (718)
.+-++++ -.+|+++.|. ..+.|+.+....++. |+.+|-
T Consensus 304 i~~~e~~~~~~Dil~P~A-~~~~I~~~na~~l~a~g~kiV~ 343 (449)
T 1bgv_A 304 FPGEKPWGQKVDIIMPCA-TQNDVDLEQAKKIVANNVKYYI 343 (449)
T ss_dssp EETCCGGGSCCSEEECCS-CTTCBCHHHHHHHHHTTCCEEE
T ss_pred eCchhhhcCCcceeeccc-cccccchhhHHHHHhcCCeEEE
Confidence 2223333 3789998875 456888888887763 554443
No 280
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.06 E-value=0.014 Score=57.60 Aligned_cols=41 Identities=17% Similarity=0.235 Sum_probs=34.2
Q ss_pred ccccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccH
Q psy7896 344 IMLAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINA 384 (718)
Q Consensus 344 ~eL~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~a 384 (718)
..+.||+|.|.|. |.||+.+++.|...|.+|+++++++.+.
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~ 58 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQG 58 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHH
Confidence 5688999999998 9999999999999999999999887654
No 281
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.05 E-value=0.023 Score=58.17 Aligned_cols=36 Identities=31% Similarity=0.392 Sum_probs=32.8
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
..+++|.|||.|.+|..+|..++.+|.+|+++++.+
T Consensus 153 ~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~ 188 (319)
T 3cty_A 153 FKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP 188 (319)
T ss_dssp GBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC
Confidence 468999999999999999999999999999987655
No 282
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.04 E-value=0.013 Score=64.13 Aligned_cols=35 Identities=23% Similarity=0.192 Sum_probs=32.5
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
.++++.|||.|.+|..+|..++.+|.+|+++++.+
T Consensus 146 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 180 (452)
T 3oc4_A 146 NSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLE 180 (452)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccC
Confidence 57999999999999999999999999999998765
No 283
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=96.04 E-value=0.17 Score=55.50 Aligned_cols=161 Identities=19% Similarity=0.146 Sum_probs=99.5
Q ss_pred ccchhhHHHHHhhhcccccCCcEEEEEecC---CCChhHHHHHHh-------cC-----CeEEEeecCchhhhhhhhhhh
Q psy7896 249 YGCRESLVDGLKRATDIMLAGKVAVVAGYG---DVGKGCAQSLRL-------FG-----SRVIVTEIDPINALQASMEGY 313 (718)
Q Consensus 249 ~G~~es~~~~i~r~t~~~~~Gk~vvViGyG---~vG~~~A~aLra-------~G-----v~VtV~D~dp~r~v~AvaeGf 313 (718)
.|-+||+-|...- +..---+.|+... ..+-..+..+.+ -| ++|++...+...=.|++++-|
T Consensus 102 l~kGEsl~DTarv----Ls~y~D~IviRh~~~~g~~~~~~~~la~~~~~~~~~~v~~~~~PVINal~d~~HPtQaLaDl~ 177 (399)
T 3q98_A 102 IAHGETVRETANM----ISFCADAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQSMADLA 177 (399)
T ss_dssp --CCTTHHHHHHH----TCTTEEEEEEEECCCCCC---HHHHHHHHHHHHHHTTSCSSCCEEEEEECSSCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHH----HHhhCcEEEEeccccCCcchHHHHHHHHHhhhhcccccccCCCcEEeCCCCCcCcHHHHHHHH
Confidence 4668999887643 2223445666632 122222222222 23 478887776666677777766
Q ss_pred hhhHHHHHHHHHHhcccccccchhhhhhhcc--cccCcEEEEEec-----C---hhHHHHHHHHHhCCCEEEEEecCCc-
Q psy7896 314 ELDEEVAALHLEHLGVKLTKLTEDQAKYLDI--MLAGKVAVVAGY-----G---DVGKGCAQSLRLFGSRVIVTEIDPI- 382 (718)
Q Consensus 314 ~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~--eL~GktVGIIG~-----G---~IG~~vA~~l~~fGa~Viv~d~dp~- 382 (718)
.+-+ ..|. .|+|++|+++|- | ++....+..+..||++|.++-+...
T Consensus 178 TI~E-----------------------~~G~~~~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~~~~P~~~~ 234 (399)
T 3q98_A 178 WLRE-----------------------HFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYD 234 (399)
T ss_dssp HHHH-----------------------HHSSSGGGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEEEECCTTCC
T ss_pred HHHH-----------------------HhCCccccCCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEEEECCcccC
Confidence 5432 1222 478999999983 4 6888999999999999999854321
Q ss_pred --cHH-H-----HhhcCce---ecCHHHHhccCcEEEEcC----C-------------------------------CCCC
Q psy7896 383 --NAL-Q-----ASMEGYE---VTTMEEAAKEGGIFVTTT----G-------------------------------CKDI 416 (718)
Q Consensus 383 --~al-~-----a~~~G~~---v~~Leell~~aDiIi~at----g-------------------------------t~~l 416 (718)
... + +...|.. ..+++|+++.+|||.+.+ | ....
T Consensus 235 ~~~~~~~~a~~~a~~~G~~i~~~~d~~eav~~aDvVytd~W~Smg~~~er~~~~~~~~~~~~~~~e~~~~~r~~~~~~yq 314 (399)
T 3q98_A 235 LIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEERTELLRANDHEGLKALEKQCLAQNAQHKDWH 314 (399)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTTTCC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEcCHHHHhCCCCEEEecCccccchhhhhhhhccccchhhhhhhhhhhhHHHHHccCcE
Confidence 111 1 1123532 368999999999998842 1 1245
Q ss_pred cCHHHHhcCCC-CeEEEEcCC
Q psy7896 417 IRGEHFLQMRD-DAIVCNIGH 436 (718)
Q Consensus 417 I~~e~l~~MK~-gAiLIN~GR 436 (718)
||.+.++..++ ++++.-|.-
T Consensus 315 Vn~elm~~a~~~daifMHcLP 335 (399)
T 3q98_A 315 CTEEMMELTRDGEALYMHCLP 335 (399)
T ss_dssp BCHHHHHTSGGGCCEECCCSS
T ss_pred ECHHHHhhcCCCCcEEECCCC
Confidence 88888888874 888877753
No 284
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.03 E-value=0.0061 Score=64.69 Aligned_cols=90 Identities=17% Similarity=0.216 Sum_probs=67.0
Q ss_pred ccCcEEEEE-ecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee------cCHHHHhc-----cCcEEEEcCCC
Q psy7896 346 LAGKVAVVA-GYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV------TTMEEAAK-----EGGIFVTTTGC 413 (718)
Q Consensus 346 L~GktVGII-G~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v------~~Leell~-----~aDiIi~atgt 413 (718)
-.|++|.|+ |.|.||..+++.++.+|++|+++++++.+...+...|... .++.+.++ ..|+++.+.|.
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 245 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGA 245 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCG
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCH
Confidence 368999999 6799999999999999999999998776543333334321 12333332 47999998886
Q ss_pred CCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 414 KDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 414 ~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
. .-...+..|+++..++++|..
T Consensus 246 ~--~~~~~~~~l~~~G~iv~~g~~ 267 (353)
T 4dup_A 246 A--YFERNIASLAKDGCLSIIAFL 267 (353)
T ss_dssp G--GHHHHHHTEEEEEEEEECCCT
T ss_pred H--HHHHHHHHhccCCEEEEEEec
Confidence 4 234678899999999999864
No 285
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.03 E-value=0.018 Score=65.09 Aligned_cols=38 Identities=29% Similarity=0.269 Sum_probs=34.9
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.+.||+|+|||.|.+|..+|..+...|.+|+++.+.|.
T Consensus 175 ~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 175 SLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 46799999999999999999999999999999987764
No 286
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.03 E-value=0.0053 Score=64.39 Aligned_cols=90 Identities=21% Similarity=0.253 Sum_probs=66.1
Q ss_pred ccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHH-hhcCcee------cCHHHHhc-----cCcEEEEcCC
Q psy7896 346 LAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQA-SMEGYEV------TTMEEAAK-----EGGIFVTTTG 412 (718)
Q Consensus 346 L~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a-~~~G~~v------~~Leell~-----~aDiIi~atg 412 (718)
-.|++|.|+|. |.||..+++.++.+|++|+++++++.+...+ ...|... .++.+.+. ..|+++.+.|
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 227 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVG 227 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCC
Confidence 46899999999 9999999999999999999998877654333 3344321 12333322 3789988877
Q ss_pred CCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 413 CKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
.. .-...++.|+++..++.+|..
T Consensus 228 ~~--~~~~~~~~l~~~G~iv~~G~~ 250 (336)
T 4b7c_A 228 GE--ILDTVLTRIAFKARIVLCGAI 250 (336)
T ss_dssp HH--HHHHHHTTEEEEEEEEECCCG
T ss_pred cc--hHHHHHHHHhhCCEEEEEeec
Confidence 52 234567889999999998864
No 287
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=96.01 E-value=0.0061 Score=71.62 Aligned_cols=87 Identities=18% Similarity=0.163 Sum_probs=60.2
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHH-----------hhcC-------------ce-ecCHHHHhcc
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA-----------SMEG-------------YE-VTTMEEAAKE 403 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a-----------~~~G-------------~~-v~~Leell~~ 403 (718)
++|+|||.|.+|..+|..+...|.+|+++|+++.....+ ...| .. ..++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 689999999999999999999999999999987543211 0122 11 2345 57889
Q ss_pred CcEEEEcCCCCC----CcCHHHHhcCCCCeEEE-EcCC
Q psy7896 404 GGIFVTTTGCKD----IIRGEHFLQMRDDAIVC-NIGH 436 (718)
Q Consensus 404 aDiIi~atgt~~----lI~~e~l~~MK~gAiLI-N~GR 436 (718)
||+|+.+....- .+-.+..+.++++++++ |++.
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntSt 429 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTST 429 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCC
Confidence 999999855431 12223345689999885 5554
No 288
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.01 E-value=0.011 Score=66.23 Aligned_cols=36 Identities=25% Similarity=0.288 Sum_probs=32.7
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.+++|.|||.|.+|..+|..++.+|.+|+++++.+.
T Consensus 150 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 150 NVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 478999999999999999999999999999987653
No 289
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.00 E-value=0.021 Score=57.71 Aligned_cols=38 Identities=21% Similarity=0.133 Sum_probs=34.0
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
...+++|.|||.|.+|..+|..++.+|.+|+++++.+.
T Consensus 144 ~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~ 181 (315)
T 3r9u_A 144 FYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDE 181 (315)
T ss_dssp GGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred ccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC
Confidence 35789999999999999999999999999999876653
No 290
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=95.97 E-value=0.017 Score=61.77 Aligned_cols=91 Identities=18% Similarity=0.176 Sum_probs=63.7
Q ss_pred ccCcEEEEEe-cChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee------cCHHHHh---ccCcEEEEcCCCCC
Q psy7896 346 LAGKVAVVAG-YGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV------TTMEEAA---KEGGIFVTTTGCKD 415 (718)
Q Consensus 346 L~GktVGIIG-~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v------~~Leell---~~aDiIi~atgt~~ 415 (718)
-.|++|.|+| .|.||..+++.++.+|++|++++ ++.+...+...|... .++.+.+ ...|+++.++|...
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~ 260 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGST 260 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChh
Confidence 3689999999 79999999999999999999887 444432333345421 1233333 24799998887642
Q ss_pred CcCHHHHhcCCCCeEEEEcCCC
Q psy7896 416 IIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 416 lI~~e~l~~MK~gAiLIN~GRg 437 (718)
..-...+..++++..++.+|..
T Consensus 261 ~~~~~~~~~l~~~G~iv~~g~~ 282 (375)
T 2vn8_A 261 ETWAPDFLKKWSGATYVTLVTP 282 (375)
T ss_dssp HHHGGGGBCSSSCCEEEESCCS
T ss_pred hhhHHHHHhhcCCcEEEEeCCC
Confidence 2113567788999999998864
No 291
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.97 E-value=0.0099 Score=64.21 Aligned_cols=36 Identities=22% Similarity=0.284 Sum_probs=33.3
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.+++|.|||.|.+|..+|..++.+|.+|+++++.+.
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~ 177 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDE 177 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCc
Confidence 389999999999999999999999999999987764
No 292
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.97 E-value=0.0058 Score=65.18 Aligned_cols=90 Identities=16% Similarity=0.089 Sum_probs=64.8
Q ss_pred ccCcEEEEEe-cChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee------cCHHHHhc-----cCcEEEEcCCC
Q psy7896 346 LAGKVAVVAG-YGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV------TTMEEAAK-----EGGIFVTTTGC 413 (718)
Q Consensus 346 L~GktVGIIG-~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v------~~Leell~-----~aDiIi~atgt 413 (718)
-.|++|.|+| .|.||..+++.++.+|++|+++++++.+...+...|... .++.+.++ ..|+++.+++.
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 241 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG 241 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCH
Confidence 3689999999 799999999999999999999988765433333344321 13333332 36898888775
Q ss_pred CCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 414 KDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 414 ~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
. .-...++.|+++..++.+|..
T Consensus 242 ~--~~~~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 242 A--MFDLAVDALATKGRLIVIGFI 263 (362)
T ss_dssp H--HHHHHHHHEEEEEEEEECCCG
T ss_pred H--HHHHHHHHHhcCCEEEEEeCC
Confidence 2 234567888999999988764
No 293
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=95.96 E-value=0.019 Score=63.48 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=32.4
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
.+++|.|||.|.+|..+|..++.+|.+|++++..+
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 231 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD 231 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc
Confidence 57999999999999999999999999999997655
No 294
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.96 E-value=0.0027 Score=66.29 Aligned_cols=40 Identities=23% Similarity=0.211 Sum_probs=36.0
Q ss_pred cccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 343 DIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 343 g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
...++||+|.|||.|++|...++.|...|++|++++.++.
T Consensus 8 ~~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 8 AHQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp EECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred EEEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 3578999999999999999999999999999999986543
No 295
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=95.96 E-value=0.0081 Score=61.34 Aligned_cols=37 Identities=22% Similarity=0.390 Sum_probs=34.4
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCC
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDP 381 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp 381 (718)
.|++++|.|||.|.+|..+|+.|...|. +++++|.|.
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4788999999999999999999999998 899999887
No 296
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.96 E-value=0.019 Score=65.03 Aligned_cols=39 Identities=21% Similarity=0.186 Sum_probs=35.3
Q ss_pred ccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 344 IMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.++.||+|+|||.|.+|..+|..+...|.+|+++.+.|.
T Consensus 181 ~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 181 VDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp CCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred cccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 446799999999999999999999999999999987764
No 297
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.95 E-value=0.006 Score=64.23 Aligned_cols=90 Identities=18% Similarity=0.196 Sum_probs=66.1
Q ss_pred ccCcEEEEEecC-hhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee------cCHHHHh------ccCcEEEEcCC
Q psy7896 346 LAGKVAVVAGYG-DVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV------TTMEEAA------KEGGIFVTTTG 412 (718)
Q Consensus 346 L~GktVGIIG~G-~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v------~~Leell------~~aDiIi~atg 412 (718)
-.|++|.|+|.| .||..+++.++.+|++|+++++++.+...+...|... .++.+.+ +..|+++.++|
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g 222 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIG 222 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCC
Confidence 368999999998 8999999999999999999998776543333344321 1233322 14799998887
Q ss_pred CCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 413 CKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
.... .+.+..++++..++.+|..
T Consensus 223 ~~~~--~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 223 GPDG--NELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp HHHH--HHHHHTEEEEEEEEECCCT
T ss_pred ChhH--HHHHHHhcCCCEEEEEeec
Confidence 6433 3456789999999999864
No 298
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=95.94 E-value=0.031 Score=62.20 Aligned_cols=107 Identities=12% Similarity=0.158 Sum_probs=83.5
Q ss_pred hcccccCcEEEEEecChhHHHHHHHHHhCCC---EEEEEecCCc----c-HH---------H--Hhh-cCceecCHHHHh
Q psy7896 342 LDIMLAGKVAVVAGYGDVGKGCAQSLRLFGS---RVIVTEIDPI----N-AL---------Q--ASM-EGYEVTTMEEAA 401 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa---~Viv~d~dp~----~-al---------~--a~~-~G~~v~~Leell 401 (718)
.|..|...+|.|.|.|.-|..+|+.+...|+ ++.++|+.-. + .+ . +.. ..-...+|.|++
T Consensus 213 ~gk~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav 292 (487)
T 3nv9_A 213 VKKDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEAC 292 (487)
T ss_dssp HTCCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHH
T ss_pred hCCChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHH
Confidence 4678899999999999999999999999999 7999886421 1 11 0 111 111345899999
Q ss_pred ccCcEEEEcCCC-CCCcCHHHHhcCCCCeEEEEcCCCCccccHHHHhc
Q psy7896 402 KEGGIFVTTTGC-KDIIRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDK 448 (718)
Q Consensus 402 ~~aDiIi~atgt-~~lI~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~ 448 (718)
+.+|+++-++.. .++++++.++.|.+..|+.-.+.-..|+..+....
T Consensus 293 ~~adVlIG~S~~~pg~ft~e~V~~Ma~~PIIFaLSNPtpEi~pe~A~~ 340 (487)
T 3nv9_A 293 VGADVLISLSTPGPGVVKAEWIKSMGEKPIVFCCANPVPEIYPYEAKE 340 (487)
T ss_dssp TTCSEEEECCCSSCCCCCHHHHHTSCSSCEEEECCSSSCSSCHHHHHH
T ss_pred hcCCEEEEecccCCCCCCHHHHHhhcCCCEEEECCCCCccCCHHHHHH
Confidence 999999987632 78999999999999999999888766888764443
No 299
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.90 E-value=0.0066 Score=63.53 Aligned_cols=90 Identities=18% Similarity=0.210 Sum_probs=66.5
Q ss_pred ccCcEEEEEe-cChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-e-----cCHHHHh------ccCcEEEEcCC
Q psy7896 346 LAGKVAVVAG-YGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-V-----TTMEEAA------KEGGIFVTTTG 412 (718)
Q Consensus 346 L~GktVGIIG-~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v-----~~Leell------~~aDiIi~atg 412 (718)
-.|++|.|+| .|.||..+++.++.+|++|+++++++.+...+...|.. + .++.+.+ +..|+++.+.|
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g 218 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVG 218 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCC
Confidence 3689999999 79999999999999999999998877654333333432 1 1232222 24799998887
Q ss_pred CCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 413 CKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
.. . -...++.|+++..++.+|..
T Consensus 219 ~~-~-~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 219 QD-T-WLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp GG-G-HHHHHTTEEEEEEEEECCCT
T ss_pred hH-H-HHHHHHHhcCCCEEEEEecC
Confidence 62 2 34678899999999999864
No 300
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=95.90 E-value=0.032 Score=56.50 Aligned_cols=39 Identities=21% Similarity=0.289 Sum_probs=34.5
Q ss_pred ccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 344 IMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
....+++|.|||.|.+|..+|..+...|.+|+++++.+.
T Consensus 150 ~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~ 188 (323)
T 3f8d_A 150 PLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDT 188 (323)
T ss_dssp GGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSS
T ss_pred hHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCC
Confidence 345789999999999999999999999999999987653
No 301
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.90 E-value=0.005 Score=64.92 Aligned_cols=90 Identities=17% Similarity=0.255 Sum_probs=64.6
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhhcCcee-----cCHHHHhc-----cCcEEEEcCCCCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQASMEGYEV-----TTMEEAAK-----EGGIFVTTTGCKD 415 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~~G~~v-----~~Leell~-----~aDiIi~atgt~~ 415 (718)
.|++|.|+|.|.||..+++.++.+|+ +|+++++++.+...+......+ .++.+.++ ..|+++.+++...
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~ 243 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEA 243 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHhcCCCCCEEEECCCCHH
Confidence 79999999999999999999999999 9999987765422221111111 13333332 4799998887633
Q ss_pred CcCHHHHhcCCCCeEEEEcCCC
Q psy7896 416 IIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 416 lI~~e~l~~MK~gAiLIN~GRg 437 (718)
.+ ...++.|+++..++.+|..
T Consensus 244 ~~-~~~~~~l~~~G~iv~~g~~ 264 (343)
T 2dq4_A 244 AI-HQGLMALIPGGEARILGIP 264 (343)
T ss_dssp HH-HHHHHHEEEEEEEEECCCC
T ss_pred HH-HHHHHHHhcCCEEEEEecC
Confidence 32 3568889999999999864
No 302
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.89 E-value=0.0053 Score=64.50 Aligned_cols=90 Identities=18% Similarity=0.225 Sum_probs=63.9
Q ss_pred ccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHh-hcCce-ec------CHHHHhc-----cCcEEEEcC
Q psy7896 346 LAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQAS-MEGYE-VT------TMEEAAK-----EGGIFVTTT 411 (718)
Q Consensus 346 L~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~-~~G~~-v~------~Leell~-----~aDiIi~at 411 (718)
-.|++|.|+|. |.||+.+++.++.+|++|+++++++.+...+. ..|.. +. ++.+.++ ..|+++.+.
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 233 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENV 233 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECC
Confidence 36899999997 99999999999999999999988765433332 23432 11 2333332 468888887
Q ss_pred CCCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 412 GCKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 412 gt~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
+.. .-...++.|+++..++.+|..
T Consensus 234 g~~--~~~~~~~~l~~~G~~v~~G~~ 257 (345)
T 2j3h_A 234 GGK--MLDAVLVNMNMHGRIAVCGMI 257 (345)
T ss_dssp CHH--HHHHHHTTEEEEEEEEECCCG
T ss_pred CHH--HHHHHHHHHhcCCEEEEEccc
Confidence 752 234567888899988888753
No 303
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.89 E-value=0.0077 Score=63.15 Aligned_cols=90 Identities=16% Similarity=0.140 Sum_probs=66.4
Q ss_pred ccCcEEEEEe-cChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee------cCHHHHh------ccCcEEEEcCC
Q psy7896 346 LAGKVAVVAG-YGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV------TTMEEAA------KEGGIFVTTTG 412 (718)
Q Consensus 346 L~GktVGIIG-~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v------~~Leell------~~aDiIi~atg 412 (718)
-.|++|.|+| .|.||..+++.++.+|++|+++++++.+...+...|... .++.+.+ +..|+++.+.|
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g 226 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVG 226 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCG
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCC
Confidence 4689999999 899999999999999999999988776543343445431 1222222 14799988887
Q ss_pred CCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 413 CKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
.. .-...++.|+++..++.+|..
T Consensus 227 ~~--~~~~~~~~l~~~G~iv~~G~~ 249 (334)
T 3qwb_A 227 KD--TFEISLAALKRKGVFVSFGNA 249 (334)
T ss_dssp GG--GHHHHHHHEEEEEEEEECCCT
T ss_pred hH--HHHHHHHHhccCCEEEEEcCC
Confidence 62 234568899999999999864
No 304
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.88 E-value=0.0044 Score=65.40 Aligned_cols=90 Identities=16% Similarity=0.146 Sum_probs=66.3
Q ss_pred cCcEEEEEecChhHHHHHHHHHhC--CCEEEEEecCCccHHHHhhcCce-ecCHHH------Hhc---cCcEEEEcCCCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLF--GSRVIVTEIDPINALQASMEGYE-VTTMEE------AAK---EGGIFVTTTGCK 414 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~f--Ga~Viv~d~dp~~al~a~~~G~~-v~~Lee------ll~---~aDiIi~atgt~ 414 (718)
.|++|.|+|.|.||..+++.++.+ |++|++++.++.+...+...|.. +.+..+ .+. ..|+++.+++..
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~ 249 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTE 249 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCCh
Confidence 799999999999999999999999 99999998776554333334542 233211 122 479999988864
Q ss_pred CCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 415 DIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 415 ~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
..+ ...++.|+++..++.+|..
T Consensus 250 ~~~-~~~~~~l~~~G~iv~~g~~ 271 (344)
T 2h6e_A 250 ETT-YNLGKLLAQEGAIILVGME 271 (344)
T ss_dssp HHH-HHHHHHEEEEEEEEECCCC
T ss_pred HHH-HHHHHHhhcCCEEEEeCCC
Confidence 233 3567889999999999864
No 305
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=95.88 E-value=0.094 Score=56.72 Aligned_cols=176 Identities=15% Similarity=0.050 Sum_probs=112.3
Q ss_pred ccceEEEecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhh
Q psy7896 229 LGVPAINVNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA 308 (718)
Q Consensus 229 l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~A 308 (718)
|+--+++.+.+.+ ..|-+||+.|.+.--.. +. . ++|+. .+---.+...++--+++|++-+.+...-.|+
T Consensus 95 LGg~vi~l~~~~s------s~~kgEsl~DTarvLs~-~~--D-~IviR-~~~~~~~~~la~~s~vPVING~g~~~HPtQa 163 (358)
T 4h31_A 95 QGAQVTYIGPSGS------QIGDKESMKDTARVLGR-MY--D-GIQYR-GFGQAIVEELGAFAGVPVWNGLTDEFHPTQI 163 (358)
T ss_dssp TTCEEEEECSSSS------CBTTTBCHHHHHHHHHH-HC--S-EEEEE-CSCHHHHHHHHHHSSSCEEESCCSSCCHHHH
T ss_pred cCCeEEECCcccc------cccCccchhHHHHHhhc-cC--c-eeEec-ccchhHHHHhhhhccCceECCCCcCCCchHH
Confidence 4445555554322 23567898876653222 21 2 33343 3333334445566678999877776666777
Q ss_pred hhhhhhhhHHHHHHHHHHhcccccccchhhhhhhcccccCcEEEEEecC--hhHHHHHHHHHhCCCEEEEEecCCcc---
Q psy7896 309 SMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGYG--DVGKGCAQSLRLFGSRVIVTEIDPIN--- 383 (718)
Q Consensus 309 vaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~G--~IG~~vA~~l~~fGa~Viv~d~dp~~--- 383 (718)
+++-|.+-+ .+.+..+.|++|++||=+ ++....+..+..||++|.++-+....
T Consensus 164 L~Dl~Ti~e----------------------~~~~~~l~gl~ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~ 221 (358)
T 4h31_A 164 LADFLTMLE----------------------HSQGKALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDE 221 (358)
T ss_dssp HHHHHHHHH----------------------TTTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCCH
T ss_pred HHHHHHHHH----------------------HhcCCCcCceEEEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCCH
Confidence 777665421 122457899999999965 79999999999999999998542221
Q ss_pred HH------HHhhcCce---ecCHHHHhccCcEEEEcC----C-------------CCCCcCHHHHhcC-CCCeEEEEcCC
Q psy7896 384 AL------QASMEGYE---VTTMEEAAKEGGIFVTTT----G-------------CKDIIRGEHFLQM-RDDAIVCNIGH 436 (718)
Q Consensus 384 al------~a~~~G~~---v~~Leell~~aDiIi~at----g-------------t~~lI~~e~l~~M-K~gAiLIN~GR 436 (718)
.. .+...|.. ..+++|+++.+|||.+.. + ...-++.+.++++ |+++++.-++-
T Consensus 222 ~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~s~~~~~~~~~~~~~~~~~y~v~~~~l~~~ak~~~i~mH~LP 301 (358)
T 4h31_A 222 ELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCLP 301 (358)
T ss_dssp HHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHHTTCTTCEEEECSC
T ss_pred HHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEEEEEEEcccCchhHHHHHHHHhCcccCHHHHHhcCCCCcEEECCCC
Confidence 11 01123433 358999999999998731 1 1124888888764 88999998875
Q ss_pred C
Q psy7896 437 F 437 (718)
Q Consensus 437 g 437 (718)
.
T Consensus 302 ~ 302 (358)
T 4h31_A 302 A 302 (358)
T ss_dssp C
T ss_pred C
Confidence 3
No 306
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.85 E-value=0.034 Score=60.90 Aligned_cols=36 Identities=31% Similarity=0.377 Sum_probs=32.8
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.++++.|||.|.+|..+|..++.+|.+|+++++.+.
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 208 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPR 208 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCc
Confidence 468999999999999999999999999999987653
No 307
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.85 E-value=0.0077 Score=64.63 Aligned_cols=91 Identities=23% Similarity=0.202 Sum_probs=66.4
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCC-CEEEEEecCCccHHHHhhcCce-ecC--------HHHHh----c--cCcEEEEc
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFG-SRVIVTEIDPINALQASMEGYE-VTT--------MEEAA----K--EGGIFVTT 410 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fG-a~Viv~d~dp~~al~a~~~G~~-v~~--------Leell----~--~aDiIi~a 410 (718)
.|++|.|+|.|.||..+++.++.+| ++|+++++++.+...+...|.. +.+ +.+.+ . ..|+++.+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~ 274 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEA 274 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEEC
Confidence 5899999999999999999999999 5999999877654334444543 111 11222 1 47999988
Q ss_pred CCCCCCcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 411 TGCKDIIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 411 tgt~~lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
++....+ ...++.|+++..++.+|...
T Consensus 275 ~g~~~~~-~~~~~~l~~~G~iv~~G~~~ 301 (380)
T 1vj0_A 275 TGDSRAL-LEGSELLRRGGFYSVAGVAV 301 (380)
T ss_dssp SSCTTHH-HHHHHHEEEEEEEEECCCCS
T ss_pred CCCHHHH-HHHHHHHhcCCEEEEEecCC
Confidence 8764333 35688899999999998643
No 308
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=95.84 E-value=0.027 Score=59.12 Aligned_cols=64 Identities=17% Similarity=0.199 Sum_probs=47.0
Q ss_pred cEEEEEecChhHHHHHHHHHh--CCCEEEEEecCCccHHHH---hhcC---------cee-cCHHHHhccCcEEEEcCCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRL--FGSRVIVTEIDPINALQA---SMEG---------YEV-TTMEEAAKEGGIFVTTTGC 413 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~--fGa~Viv~d~dp~~al~a---~~~G---------~~v-~~Leell~~aDiIi~atgt 413 (718)
++|+|||.|.+|..+|..+.. +|.+|+++|+++.+.... ..++ +.. .+.++ ++.+|+|+.+.++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 479999999999999999876 688999999988543211 1111 122 45666 8999999998654
No 309
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.84 E-value=0.011 Score=62.33 Aligned_cols=89 Identities=20% Similarity=0.173 Sum_probs=64.3
Q ss_pred cCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-ec-----CHHHHh------ccCcEEEEcCCC
Q psy7896 347 AGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-VT-----TMEEAA------KEGGIFVTTTGC 413 (718)
Q Consensus 347 ~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v~-----~Leell------~~aDiIi~atgt 413 (718)
.|++|.|+|. |.||+.+++.++.+|++|+++++++.+...+...|.. +. ++.+.+ +..|+++.+++.
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 245 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGA 245 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESSCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCCH
Confidence 6899999999 9999999999999999999998876543333223432 11 222222 247899888873
Q ss_pred CCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 414 KDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 414 ~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
. .-...++.|+++..++.+|..
T Consensus 246 -~-~~~~~~~~l~~~G~~v~~g~~ 267 (343)
T 2eih_A 246 -L-YFEGVIKATANGGRIAIAGAS 267 (343)
T ss_dssp -S-SHHHHHHHEEEEEEEEESSCC
T ss_pred -H-HHHHHHHhhccCCEEEEEecC
Confidence 2 334678889999999998864
No 310
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=95.83 E-value=0.012 Score=62.11 Aligned_cols=88 Identities=20% Similarity=0.094 Sum_probs=65.1
Q ss_pred CcEEEEE-ecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-e-----cCHHHHh------ccCcEEEEcCCCC
Q psy7896 348 GKVAVVA-GYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-V-----TTMEEAA------KEGGIFVTTTGCK 414 (718)
Q Consensus 348 GktVGII-G~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v-----~~Leell------~~aDiIi~atgt~ 414 (718)
+++|.|. |.|.||..+++.++.+|++|++++.++.+...+...|.. + .++.+.+ +..|+++.+.|..
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~~ 244 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGP 244 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCCh
Confidence 3677666 899999999999999999999999877654434334542 1 1233322 2589999988865
Q ss_pred CCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 415 DIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 415 ~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
.+ ...++.|+++..++++|..
T Consensus 245 ~~--~~~~~~l~~~G~iv~~G~~ 265 (349)
T 3pi7_A 245 LA--SAIFNAMPKRARWIIYGRL 265 (349)
T ss_dssp HH--HHHHHHSCTTCEEEECCCS
T ss_pred hH--HHHHhhhcCCCEEEEEecc
Confidence 33 5678999999999999853
No 311
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.82 E-value=0.029 Score=57.83 Aligned_cols=41 Identities=29% Similarity=0.221 Sum_probs=36.5
Q ss_pred cccccCcEEEEEe-cChhHHHHHHHHHhCCCEEEEEecCCcc
Q psy7896 343 DIMLAGKVAVVAG-YGDVGKGCAQSLRLFGSRVIVTEIDPIN 383 (718)
Q Consensus 343 g~eL~GktVGIIG-~G~IG~~vA~~l~~fGa~Viv~d~dp~~ 383 (718)
+..+.||++.|+| .|.||+++++.|...|++|+++++++.+
T Consensus 114 ~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~ 155 (287)
T 1lu9_A 114 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDK 155 (287)
T ss_dssp TSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHH
Confidence 3467899999999 9999999999999999999999887654
No 312
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.82 E-value=0.035 Score=59.14 Aligned_cols=34 Identities=21% Similarity=0.157 Sum_probs=32.2
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
++++.|||.|.+|..+|..++.+|.+|++++..+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE 178 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc
Confidence 8999999999999999999999999999998765
No 313
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.80 E-value=0.024 Score=59.00 Aligned_cols=91 Identities=18% Similarity=0.210 Sum_probs=59.5
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCC--EEEEEecCCccHH-HH--hhcCc------ee--cCHHHHhccCcEEEEcCCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGS--RVIVTEIDPINAL-QA--SMEGY------EV--TTMEEAAKEGGIFVTTTGC 413 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa--~Viv~d~dp~~al-~a--~~~G~------~v--~~Leell~~aDiIi~atgt 413 (718)
..++|+|||.|.+|..+|..+...|. +|+++|+++.+.. .+ ..++. .+ .+-.+.++.+|+|+++++.
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v~~ 85 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGP 85 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECCCC
Confidence 34689999999999999999988888 9999998864321 11 11221 11 1123567899999998764
Q ss_pred CCCc--C---------------HHHHhcCCCCeEEEEcCCC
Q psy7896 414 KDII--R---------------GEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 414 ~~lI--~---------------~e~l~~MK~gAiLIN~GRg 437 (718)
...- + .+.+....++++++++.-+
T Consensus 86 ~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np 126 (319)
T 1lld_A 86 RQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNP 126 (319)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCc
Confidence 3221 0 1223333678889887664
No 314
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.79 E-value=0.0067 Score=64.39 Aligned_cols=88 Identities=13% Similarity=0.009 Sum_probs=65.0
Q ss_pred CcEEEEEecChhHHHH-HHHH-HhCCCE-EEEEecCCc---cHHHHhhcCceec-----CHHHHhc----cCcEEEEcCC
Q psy7896 348 GKVAVVAGYGDVGKGC-AQSL-RLFGSR-VIVTEIDPI---NALQASMEGYEVT-----TMEEAAK----EGGIFVTTTG 412 (718)
Q Consensus 348 GktVGIIG~G~IG~~v-A~~l-~~fGa~-Viv~d~dp~---~al~a~~~G~~v~-----~Leell~----~aDiIi~atg 412 (718)
+++|.|+|.|.||..+ ++.+ +.+|++ |++++.++. +...+...|...+ ++.+ ++ ..|+++-++|
T Consensus 173 ~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~-i~~~~gg~Dvvid~~g 251 (357)
T 2b5w_A 173 PSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVED-VPDVYEQMDFIYEATG 251 (357)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGG-HHHHSCCEEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHH-HHHhCCCCCEEEECCC
Confidence 3999999999999999 9999 999997 999998776 5433444554322 2222 22 3699998887
Q ss_pred CCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 413 CKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
....+ ...++.++++..++.+|..
T Consensus 252 ~~~~~-~~~~~~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 252 FPKHA-IQSVQALAPNGVGALLGVP 275 (357)
T ss_dssp CHHHH-HHHHHHEEEEEEEEECCCC
T ss_pred ChHHH-HHHHHHHhcCCEEEEEeCC
Confidence 64222 3567889999999999864
No 315
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=95.79 E-value=0.014 Score=66.06 Aligned_cols=35 Identities=29% Similarity=0.333 Sum_probs=32.4
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
.+++|.|||.|.+|..+|..++.+|.+|+++++.+
T Consensus 186 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 220 (588)
T 3ics_A 186 KPRHATVIGGGFIGVEMVENLRERGIEVTLVEMAN 220 (588)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 58999999999999999999999999999998655
No 316
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=95.78 E-value=0.12 Score=55.48 Aligned_cols=185 Identities=12% Similarity=0.008 Sum_probs=114.6
Q ss_pred ccceEEEecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhh
Q psy7896 229 LGVPAINVNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA 308 (718)
Q Consensus 229 l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~A 308 (718)
|+-=++..+.+. ...|-+||+-|...--.. + .. +.|+. .+---.+...++--+++|++.-.+...=.|+
T Consensus 88 LGg~~i~l~~~~------ssl~kgEsl~DTarvLs~-~--~D-~IviR-~~~~~~~~~lA~~~~vPVINag~~~~HPtQa 156 (339)
T 4a8t_A 88 LGGHGEYLAPGQ------IQLGGHETIEDTSRVLSR-L--VD-ILMAR-VERHHSIVDLANCATIPVINGMSDYNHPTQE 156 (339)
T ss_dssp TTCEEEEECCC-------CCSSSSSCHHHHHHHHHH-H--CS-EEEEE-CSSHHHHHHHHHHCSSCEEECCCSSCCHHHH
T ss_pred cCCeEEEeCccc------ccCCCCcCHHHHHHHHHH-h--CC-EEEEe-cCcHHHHHHHHHhCCCCEEECCCCCcCcHHH
Confidence 444455554432 234667898876553211 2 22 33333 2222333444566678998875555555666
Q ss_pred hhhhhhhhHHHHHHHHHHhcccccccchhhhhhh--cccccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCcc--
Q psy7896 309 SMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYL--DIMLAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPIN-- 383 (718)
Q Consensus 309 vaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~--g~eL~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~-- 383 (718)
+++-|.+-+ .. |..+.|++|++||= +++....+..+..||++|.++-+....
T Consensus 157 LaDl~Ti~e-----------------------~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~ 213 (339)
T 4a8t_A 157 LGDLCTMVE-----------------------HLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLN 213 (339)
T ss_dssp HHHHHHHHH-----------------------TCCTTCCGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCC
T ss_pred HHHHHHHHH-----------------------HhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCC
Confidence 666555422 12 33589999999997 468888899999999999998543221
Q ss_pred -HH-H-----HhhcCce---ecCHHHHhccCcEEEEcC----C----C----------CCCcCHHHHhcCCCCeEEEEcC
Q psy7896 384 -AL-Q-----ASMEGYE---VTTMEEAAKEGGIFVTTT----G----C----------KDIIRGEHFLQMRDDAIVCNIG 435 (718)
Q Consensus 384 -al-~-----a~~~G~~---v~~Leell~~aDiIi~at----g----t----------~~lI~~e~l~~MK~gAiLIN~G 435 (718)
.. + +...|.. ..+++ +++.+|||.+-. | . ..-++.+.++.+|+++++.-++
T Consensus 214 ~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHcL 292 (339)
T 4a8t_A 214 EEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCL 292 (339)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEECCSSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECS
T ss_pred HHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEecCcccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCC
Confidence 11 0 1123432 35788 999999999721 1 0 1458889999999999999997
Q ss_pred CC--CccccHHHHhc
Q psy7896 436 HF--DCEIQVSWLDK 448 (718)
Q Consensus 436 Rg--d~Eid~~aL~~ 448 (718)
-. ..||+.+-+..
T Consensus 293 Pa~Rg~EIt~eV~d~ 307 (339)
T 4a8t_A 293 PATRGEEVTDEVIDG 307 (339)
T ss_dssp CCCBTTTBCHHHHTS
T ss_pred CCCCCCeeCHHHhCC
Confidence 52 35787655443
No 317
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.78 E-value=0.044 Score=60.43 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=32.4
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
.++++.|||.|.+|..+|..++.+|.+|++++..+
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~ 224 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD 224 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC
Confidence 47999999999999999999999999999998765
No 318
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.78 E-value=0.01 Score=62.93 Aligned_cols=92 Identities=17% Similarity=0.153 Sum_probs=65.3
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCE-EEEEecCCccHHHHhhcC---cee-------cCHHHHh------ccCcEEE
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSR-VIVTEIDPINALQASMEG---YEV-------TTMEEAA------KEGGIFV 408 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~-Viv~d~dp~~al~a~~~G---~~v-------~~Leell------~~aDiIi 408 (718)
-.|++|.|+|.|.||..+++.++.+|++ |++++.++.+...+...+ +.. .++.+.+ +..|+++
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvi 257 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVAL 257 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEE
Confidence 3689999999999999999999999997 899987775532222112 111 1122222 2479999
Q ss_pred EcCCCCCCcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 409 TTTGCKDIIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 409 ~atgt~~lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
.+.|....+ ...++.++++..++.+|...
T Consensus 258 d~~g~~~~~-~~~~~~l~~~G~iv~~G~~~ 286 (363)
T 3m6i_A 258 ECTGVESSI-AAAIWAVKFGGKVFVIGVGK 286 (363)
T ss_dssp ECSCCHHHH-HHHHHHSCTTCEEEECCCCC
T ss_pred ECCCChHHH-HHHHHHhcCCCEEEEEccCC
Confidence 988864333 35688999999999998653
No 319
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=95.77 E-value=0.013 Score=62.43 Aligned_cols=67 Identities=18% Similarity=0.146 Sum_probs=52.0
Q ss_pred CcEEEEEecChhHHHHHHHHHhC-CCEEE-EEecCCccHHHHhhcCce-ecCHHHHhc--cCcEEEEcCCCC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLF-GSRVI-VTEIDPINALQASMEGYE-VTTMEEAAK--EGGIFVTTTGCK 414 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~f-Ga~Vi-v~d~dp~~al~a~~~G~~-v~~Leell~--~aDiIi~atgt~ 414 (718)
-.+|||||+|.||+..++.++.. +++|. ++|+++.+...+...|.. +.++++++. +.|+|++++.+.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~ 76 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPND 76 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGG
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcH
Confidence 35899999999999999999877 77776 578887665444444554 468999997 789999988763
No 320
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=95.77 E-value=0.13 Score=54.84 Aligned_cols=169 Identities=9% Similarity=-0.032 Sum_probs=112.0
Q ss_pred chhhHHHHHhhhcccccCCcEEEEEecCC---------CChhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHHHH
Q psy7896 251 CRESLVDGLKRATDIMLAGKVAVVAGYGD---------VGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEVAA 321 (718)
Q Consensus 251 ~~es~~~~i~r~t~~~~~Gk~vvViGyG~---------vG~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i~~ 321 (718)
.+||+-|.+.--.. + . -+.|+...+ -.-.+..+++--+++|++...+...=.|++++-|.+.+
T Consensus 89 kgEsl~DTarvLs~-y--~-D~IviR~~~~~~~~~~~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~e---- 160 (324)
T 1js1_X 89 KPEHLLEAIPVMGC-Y--C-DIIGVRSFARFENREYDYNEVIINQFIQHSGRPVFSMEAATRHPLQSFADLITIEE---- 160 (324)
T ss_dssp CCEEHHHHHHHHHH-T--C-SEEEEECCCCSSCHHHHHHTHHHHHHHHHSSSCEEESSCSSCCHHHHHHHHHHHHH----
T ss_pred CCCCHHHHHHHHHH-h--C-cEEEEecccccccccccccchHHHHHHhhCCCCEEECCCCCCCcHHHHHHHHHHHH----
Confidence 67888876653222 1 2 344454331 22223334455568999887766666777777665532
Q ss_pred HHHHHhcccccccchhhhhhhcc-cccCcEEEE-----EecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-e
Q psy7896 322 LHLEHLGVKLTKLTEDQAKYLDI-MLAGKVAVV-----AGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-V 394 (718)
Q Consensus 322 ~~l~~lgv~~~~~~~~~~~~~g~-eL~GktVGI-----IG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v 394 (718)
..|. .++ .+|++ +|=+++.+..+..+..||++|.++-+...........++. .
T Consensus 161 -------------------~~g~~~l~-l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~ 220 (324)
T 1js1_X 161 -------------------YKKTARPK-VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVE 220 (324)
T ss_dssp -------------------HCSSSSCE-EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTCCCCHHHHTTCEEE
T ss_pred -------------------HcCCCCee-EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCcccCCChhhccceEEE
Confidence 1121 466 89999 9999999999999999999999985533322111112444 4
Q ss_pred cCHHHHhccCcEEEEcC----C-----------CCCCcCHHHHhcCCCCeEEEEcCCC--CccccHHHHhc
Q psy7896 395 TTMEEAAKEGGIFVTTT----G-----------CKDIIRGEHFLQMRDDAIVCNIGHF--DCEIQVSWLDK 448 (718)
Q Consensus 395 ~~Leell~~aDiIi~at----g-----------t~~lI~~e~l~~MK~gAiLIN~GRg--d~Eid~~aL~~ 448 (718)
.+++|+++.+|||.+.. + ....++.+.++.+| ++++.-++-. +.||+.+-+..
T Consensus 221 ~d~~eav~~aDvvy~~~w~s~g~~~~~~~~~r~~~y~vt~e~l~~a~-~ai~MHcLP~~Rg~EI~~eV~d~ 290 (324)
T 1js1_X 221 YDQMKAFEGADFIYAKNWAAYTGDNYGQILSTDRNWTVGDRQMAVTN-NAYFMHCLPVRRNMIVTDDVIES 290 (324)
T ss_dssp SCHHHHHTTCSEEEECCCCCCSTTCTTCCCCCCTTSSBCHHHHTTSS-SCEEECCSCCCBTTTBCHHHHHS
T ss_pred CCHHHHhCCCCEEEecCcccCCCccccchHHHhcCcccCHHHHHhcC-CcEEECCCCCCCCcccCHHHhCC
Confidence 68999999999999831 1 12468999999999 9999999753 35787665543
No 321
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.76 E-value=0.29 Score=50.73 Aligned_cols=102 Identities=12% Similarity=0.096 Sum_probs=70.5
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhccCcEEEE----cC---------
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAKEGGIFVT----TT--------- 411 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~~aDiIi~----at--------- 411 (718)
+.|++|.|+|........++.|...|.+|.+...+.. . ....|... .++.+.++++|+++. ..
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~-~--~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~ 81 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQL-D--HGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVF 81 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTS-S--CCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEecccc-c--cccccceeccchHHHHhcCCEEEeccccccCCccccccc
Confidence 6789999999999999999999999999987632111 0 01123332 235677889999886 11
Q ss_pred -CCCCCcCHHHHhcCCCCeEEEEcCCCCcccc-HHHHhccccce
Q psy7896 412 -GCKDIIRGEHFLQMRDDAIVCNIGHFDCEIQ-VSWLDKNAVEK 453 (718)
Q Consensus 412 -gt~~lI~~e~l~~MK~gAiLIN~GRgd~Eid-~~aL~~~~l~~ 453 (718)
+.+..++++.++.+++..+++ +|. + -+| .+++.+.++.+
T Consensus 82 a~~~~~~~~~~l~~~~~l~~i~-~g~-~-~~d~~~~~~~~gi~v 122 (300)
T 2rir_A 82 SNEEVVLKQDHLDRTPAHCVIF-SGI-S-NAYLENIAAQAKRKL 122 (300)
T ss_dssp CSSCEECCHHHHHTSCTTCEEE-ESS-C-CHHHHHHHHHTTCCE
T ss_pred ccCCccchHHHHhhcCCCCEEE-Eec-C-CHHHHHHHHHCCCEE
Confidence 233347899999999998888 665 3 477 67776655433
No 322
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=95.75 E-value=0.026 Score=62.44 Aligned_cols=35 Identities=26% Similarity=0.171 Sum_probs=31.6
Q ss_pred CcEEEEEecCCCChhHHHHHHhcC--CeEEEeecCch
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFG--SRVIVTEIDPI 303 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~G--v~VtV~D~dp~ 303 (718)
.++++|||.|+.|..+|..|+++| ..|++++..+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 42 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCc
Confidence 468999999999999999999999 99999997653
No 323
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=95.73 E-value=0.041 Score=55.92 Aligned_cols=37 Identities=22% Similarity=0.091 Sum_probs=33.4
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
..+++|.|||.|.+|..+|..++.+|.+|+++++.+.
T Consensus 141 ~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 141 YKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG 177 (311)
T ss_dssp GTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 3689999999999999999999999999999987653
No 324
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=95.73 E-value=0.038 Score=61.33 Aligned_cols=36 Identities=28% Similarity=0.193 Sum_probs=33.1
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.+++|.|||.|.||..+|..++.+|.+|+++++.+.
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 208 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGS 208 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 479999999999999999999999999999987664
No 325
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=95.73 E-value=0.084 Score=55.95 Aligned_cols=180 Identities=13% Similarity=0.103 Sum_probs=111.4
Q ss_pred ccceEEEecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEe-ecCchhhhh
Q psy7896 229 LGVPAINVNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVT-EIDPINALQ 307 (718)
Q Consensus 229 l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~-D~dp~r~v~ 307 (718)
|+-=++..++.. +...|-+||+.|...--.. + . .+.|+....-+ .+...++--+++|++. +.+...=.|
T Consensus 65 LGg~~i~l~~~~-----~ss~~kgEsl~DTarvls~-~--~-D~iviR~~~~~-~~~~lA~~~~vPVINag~g~~~HPtQ 134 (306)
T 4ekn_B 65 LGGEVITMTDLK-----SSSVAKGESLIDTIRVISG-Y--A-DIIVLRHPSEG-AARLASEYSQVPIINAGDGSNQHPTQ 134 (306)
T ss_dssp TTCEEEEECCCT-----TTTSSSSCCHHHHHHHHHH-H--C-SEEEEECSSTT-HHHHHHHHCSSCEEESCSSSSCCHHH
T ss_pred cCCEEEEcCCcc-----cccCCCCCCHHHHHHHHHH-h--C-cEEEEEcCChH-HHHHHHHhCCCCEEeCCCCCCcCcHH
Confidence 444556665411 1224667888876653222 2 2 24444433222 3333445567899987 555555567
Q ss_pred hhhhhhhhhHHHHHHHHHHhcccccccchhhhhhhcccccCcEEEEEecC---hhHHHHHHHHHhC-CCEEEEEecCCcc
Q psy7896 308 ASMEGYELDEEVAALHLEHLGVKLTKLTEDQAKYLDIMLAGKVAVVAGYG---DVGKGCAQSLRLF-GSRVIVTEIDPIN 383 (718)
Q Consensus 308 AvaeGf~L~r~i~~~~l~~lgv~~~~~~~~~~~~~g~eL~GktVGIIG~G---~IG~~vA~~l~~f-Ga~Viv~d~dp~~ 383 (718)
+.++-|.+-+ ..| .+.|++|++||=| ++....+..+..| |++|.++-+....
T Consensus 135 ~LaDl~Ti~e-----------------------~~g-~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~ 190 (306)
T 4ekn_B 135 TLLDLYTIMR-----------------------EIG-RIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELR 190 (306)
T ss_dssp HHHHHHHHHH-----------------------HHS-CSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGC
T ss_pred HHHHHHHHHH-----------------------HhC-CcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccc
Confidence 7777665432 112 4889999999984 8999999999999 9999998543221
Q ss_pred ---HH--HHhhcCce---ecCHHHHhccCcEEEEcCCC---------------CCCcCHHHHhcCCCCeEEEEcCCCCcc
Q psy7896 384 ---AL--QASMEGYE---VTTMEEAAKEGGIFVTTTGC---------------KDIIRGEHFLQMRDDAIVCNIGHFDCE 440 (718)
Q Consensus 384 ---al--~a~~~G~~---v~~Leell~~aDiIi~atgt---------------~~lI~~e~l~~MK~gAiLIN~GRgd~E 440 (718)
.. .+...|.. ..+++|+++.+|+|.+.... ..-+|.+.++. +++++.-+.--..|
T Consensus 191 ~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~~q~er~~~~~e~~~~~~~y~v~~~~l~~--~~ai~mH~lPRg~E 268 (306)
T 4ekn_B 191 LPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEG--KKFIIMHPLPRVDE 268 (306)
T ss_dssp CCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEECCCCGGGCCSHHHHHHHHHHHCBCHHHHTT--CCCEEECCSCCSSS
T ss_pred cCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeCCcccccCCCHHHHHHhccCcEECHHHHcC--CCCEEECCCCCCCe
Confidence 11 12223543 35899999999999975211 13477777776 78888887753357
Q ss_pred ccHH
Q psy7896 441 IQVS 444 (718)
Q Consensus 441 id~~ 444 (718)
|+.+
T Consensus 269 I~~e 272 (306)
T 4ekn_B 269 IDYD 272 (306)
T ss_dssp BCGG
T ss_pred ecHh
Confidence 7644
No 326
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=95.72 E-value=0.016 Score=61.12 Aligned_cols=66 Identities=17% Similarity=0.132 Sum_probs=50.8
Q ss_pred cEEEEEecChhHHHHHHHHHhC-CCEEE-EEecCCccHHH-HhhcCce-ecCHHHHhc--cCcEEEEcCCCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLF-GSRVI-VTEIDPINALQ-ASMEGYE-VTTMEEAAK--EGGIFVTTTGCK 414 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~f-Ga~Vi-v~d~dp~~al~-a~~~G~~-v~~Leell~--~aDiIi~atgt~ 414 (718)
.+|||||+|.||+..++.++.. +++++ ++|+++.+... +...|.. +.++++++. +.|+|++++.+.
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~ 76 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTS 76 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGG
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCch
Confidence 5899999999999999999876 77766 68888765433 2223443 568999998 899999987653
No 327
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.72 E-value=0.011 Score=62.17 Aligned_cols=88 Identities=22% Similarity=0.215 Sum_probs=57.3
Q ss_pred cEEEEEecChhHHHHHHHHHhCCC--EEEEEecCCccHHH-H--hhcC------cee--cCHHHHhccCcEEEEcCCCCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGS--RVIVTEIDPINALQ-A--SMEG------YEV--TTMEEAAKEGGIFVTTTGCKD 415 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa--~Viv~d~dp~~al~-a--~~~G------~~v--~~Leell~~aDiIi~atgt~~ 415 (718)
++|+|||.|.+|..+|..+...|. +|.++|+++.+... + ..++ ..+ .+ .+.++.+|+|+.+.+...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~-~~a~~~aDvVIi~~~~~~ 79 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG-HSELADAQVVILTAGANQ 79 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC-GGGGTTCSEEEECC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC-HHHhCCCCEEEEcCCCCC
Confidence 479999999999999999988888 99999998753211 1 1111 112 23 367899999999865321
Q ss_pred C--------------cCH---HHHhcCCCCeEEEEcCCC
Q psy7896 416 I--------------IRG---EHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 416 l--------------I~~---e~l~~MK~gAiLIN~GRg 437 (718)
. +-. +.+....+++++++++-.
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP 118 (304)
T 2v6b_A 80 KPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNP 118 (304)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSS
T ss_pred CCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCc
Confidence 1 001 233444688899886553
No 328
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=95.70 E-value=0.03 Score=62.62 Aligned_cols=35 Identities=17% Similarity=0.182 Sum_probs=32.4
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
.|+++.|||.|.+|..+|..++.+|.+|++++..+
T Consensus 213 ~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~ 247 (523)
T 1mo9_A 213 PGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE 247 (523)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecC
Confidence 45999999999999999999999999999998765
No 329
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=95.70 E-value=0.27 Score=58.19 Aligned_cols=90 Identities=18% Similarity=0.213 Sum_probs=65.3
Q ss_pred cccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce------ecCHHHHh------ccCcEEEEcC
Q psy7896 345 MLAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE------VTTMEEAA------KEGGIFVTTT 411 (718)
Q Consensus 345 eL~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~------v~~Leell------~~aDiIi~at 411 (718)
--.|++|.|.|. |.||+..++.++.+|++|+++...+.. +....|.. -.++.+.+ +..|+|+.+.
T Consensus 343 l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k~--~~l~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~ 420 (795)
T 3slk_A 343 LRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKW--QAVELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSL 420 (795)
T ss_dssp CCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGGGG--GGSCSCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECC
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChHHh--hhhhcChhheeecCChhHHHHHHHHcCCCCeEEEEECC
Confidence 347999999996 999999999999999999998754421 11112321 12343333 2489999887
Q ss_pred CCCCCcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 412 GCKDIIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 412 gt~~lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
+.. .+ ...++.++++..++.+|..+
T Consensus 421 gg~-~~-~~~l~~l~~~Gr~v~iG~~~ 445 (795)
T 3slk_A 421 AGE-FA-DASLRMLPRGGRFLELGKTD 445 (795)
T ss_dssp CTT-TT-HHHHTSCTTCEEEEECCSTT
T ss_pred CcH-HH-HHHHHHhcCCCEEEEecccc
Confidence 653 33 67899999999999999754
No 330
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=95.70 E-value=0.047 Score=59.98 Aligned_cols=34 Identities=21% Similarity=0.209 Sum_probs=31.8
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
+++|.|||.|.+|..+|..++.+|.+|+++++.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD 220 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC
Confidence 6899999999999999999999999999998755
No 331
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.70 E-value=0.0076 Score=65.02 Aligned_cols=115 Identities=14% Similarity=0.113 Sum_probs=70.7
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhh-----hhhhhhhhhhhHHH---HHHHHHHhccccccc-----
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINA-----LQASMEGYELDEEV---AALHLEHLGVKLTKL----- 334 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~-----v~AvaeGf~L~r~i---~~~~l~~lgv~~~~~----- 334 (718)
.-.||+|||.|+.|..+|..|+..+..|++++..+... ......+.....++ ....+...++.+...
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~ 87 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATS 87 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEE
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEE
Confidence 34689999999999999999988899999998766531 11111111000000 111122223322100
Q ss_pred -c--------------------------hhhhhhhc-------------cccc-----CcEEEEEecChhHHHHHHHHHh
Q psy7896 335 -T--------------------------EDQAKYLD-------------IMLA-----GKVAVVAGYGDVGKGCAQSLRL 369 (718)
Q Consensus 335 -~--------------------------~~~~~~~g-------------~eL~-----GktVGIIG~G~IG~~vA~~l~~ 369 (718)
. +......| ..++ +++|.|||.|.+|..+|..++.
T Consensus 88 id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~i~G~~~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~ 167 (385)
T 3klj_A 88 IDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHADEIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIID 167 (385)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTCSCEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHH
T ss_pred EECCCCEEEECCCCEEECCEEEEecCCCcCCCCCCCCCCeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHh
Confidence 0 00000001 0121 8999999999999999999999
Q ss_pred CCCEEEEEecCCc
Q psy7896 370 FGSRVIVTEIDPI 382 (718)
Q Consensus 370 fGa~Viv~d~dp~ 382 (718)
+|.+|+++++.+.
T Consensus 168 ~g~~Vtvv~~~~~ 180 (385)
T 3klj_A 168 SGTPASIGIILEY 180 (385)
T ss_dssp HTCCEEEECSSSS
T ss_pred CCCeEEEEEcCCc
Confidence 9999999987653
No 332
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=95.70 E-value=0.021 Score=61.00 Aligned_cols=77 Identities=19% Similarity=0.206 Sum_probs=53.5
Q ss_pred CccceEEEecCCcccccccccccchhhHHHHH------------hh---hcccccCCcEEEEEecCCCChhHHHHHHhcC
Q psy7896 228 KLGVPAINVNDSVTKSKFDNLYGCRESLVDGL------------KR---ATDIMLAGKVAVVAGYGDVGKGCAQSLRLFG 292 (718)
Q Consensus 228 ~l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i------------~r---~t~~~~~Gk~vvViGyG~vG~~~A~aLra~G 292 (718)
+.+++|.|+.+.......|...+.-=++.+.+ .+ ..+..+.|+++.|+|+|.+|..+|+.|+++|
T Consensus 85 ~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~G 164 (334)
T 2pi1_A 85 KKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAFG 164 (334)
T ss_dssp HHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHTT
T ss_pred HCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHCc
Confidence 34678888877666665555544111111000 00 0234588999999999999999999999999
Q ss_pred CeEEEeecCchh
Q psy7896 293 SRVIVTEIDPIN 304 (718)
Q Consensus 293 v~VtV~D~dp~r 304 (718)
.+|.++|..+..
T Consensus 165 ~~V~~~d~~~~~ 176 (334)
T 2pi1_A 165 MKVLCYDVVKRE 176 (334)
T ss_dssp CEEEEECSSCCH
T ss_pred CEEEEECCCcch
Confidence 999999987654
No 333
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.70 E-value=0.011 Score=66.14 Aligned_cols=94 Identities=15% Similarity=0.128 Sum_probs=59.1
Q ss_pred hhcccccCcEEEEEecChhHHHHHHHHHhC-CCEEEEEecCCccHHHHhh-cCcee-----c---CHHHHhccCcEEEEc
Q psy7896 341 YLDIMLAGKVAVVAGYGDVGKGCAQSLRLF-GSRVIVTEIDPINALQASM-EGYEV-----T---TMEEAAKEGGIFVTT 410 (718)
Q Consensus 341 ~~g~eL~GktVGIIG~G~IG~~vA~~l~~f-Ga~Viv~d~dp~~al~a~~-~G~~v-----~---~Leell~~aDiIi~a 410 (718)
+.+..+.+++|+|+|.|.+|+.+++.|... |.+|+++++++.++..... .+... . ++.++++.+|+||.+
T Consensus 16 ~~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~ 95 (467)
T 2axq_A 16 HIEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISL 95 (467)
T ss_dssp -------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEEC
T ss_pred ccccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEEC
Confidence 446778999999999999999999999887 7899999988765432211 23321 1 355678899999998
Q ss_pred CCCCCCcCHH-HHhcCCCCeEEEEcCC
Q psy7896 411 TGCKDIIRGE-HFLQMRDDAIVCNIGH 436 (718)
Q Consensus 411 tgt~~lI~~e-~l~~MK~gAiLIN~GR 436 (718)
++.. + ... ....++.+..++++.-
T Consensus 96 tp~~-~-~~~v~~a~l~~g~~vvd~~~ 120 (467)
T 2axq_A 96 IPYT-F-HPNVVKSAIRTKTDVVTSSY 120 (467)
T ss_dssp SCGG-G-HHHHHHHHHHHTCEEEECSC
T ss_pred Cchh-h-hHHHHHHHHhcCCEEEEeec
Confidence 7752 1 111 1123455666666654
No 334
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.67 E-value=0.0081 Score=66.82 Aligned_cols=66 Identities=18% Similarity=0.227 Sum_probs=50.7
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHh-hcCce--------ecCHHHH-hccCcEEEEcCCC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQAS-MEGYE--------VTTMEEA-AKEGGIFVTTTGC 413 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~-~~G~~--------v~~Leel-l~~aDiIi~atgt 413 (718)
.++|.|+|+|++|+.+|+.|...|.+|++.|.||....... ..++. ...|+++ +++||+++.+|+.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~ 78 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNT 78 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCC
Confidence 57899999999999999999999999999999986543221 12322 2236666 7899999987765
No 335
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.67 E-value=0.032 Score=56.84 Aligned_cols=38 Identities=21% Similarity=0.227 Sum_probs=34.0
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.+.+++|.|||.|.+|..+|..++..|.+|+++++.+.
T Consensus 151 ~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~ 188 (332)
T 3lzw_A 151 KFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK 188 (332)
T ss_dssp GGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred HcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc
Confidence 35689999999999999999999999999999877653
No 336
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.67 E-value=0.046 Score=59.98 Aligned_cols=35 Identities=23% Similarity=0.256 Sum_probs=32.2
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
.+++|.|||.|.+|..+|..++.+|.+|+++++.+
T Consensus 177 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 211 (474)
T 1zmd_A 177 VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG 211 (474)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC
Confidence 36899999999999999999999999999998765
No 337
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.66 E-value=0.01 Score=62.04 Aligned_cols=85 Identities=18% Similarity=0.148 Sum_probs=57.1
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceecC----------H-HHHhccCcEEEEcCCCCCCc
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTT----------M-EEAAKEGGIFVTTTGCKDII 417 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~----------L-eell~~aDiIi~atgt~~lI 417 (718)
++|+|||.|.||..+|..|. -|.+|+++++++.........|..+.. . ++....+|+|++++....+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~~~- 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQHQL- 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGGGH-
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHHHH-
Confidence 68999999999999999999 899999998876432222234543321 0 2456789999998765433
Q ss_pred CHHHHhc---CCCCeEEEEcCCC
Q psy7896 418 RGEHFLQ---MRDDAIVCNIGHF 437 (718)
Q Consensus 418 ~~e~l~~---MK~gAiLIN~GRg 437 (718)
.+.++. +.++. ++.+.-|
T Consensus 81 -~~~l~~l~~~~~~~-ivs~~nG 101 (307)
T 3ego_A 81 -QSVFSSLERIGKTN-ILFLQNG 101 (307)
T ss_dssp -HHHHHHTTSSCCCE-EEECCSS
T ss_pred -HHHHHHhhcCCCCe-EEEecCC
Confidence 233333 34566 6666554
No 338
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=95.65 E-value=0.027 Score=63.75 Aligned_cols=39 Identities=18% Similarity=0.188 Sum_probs=35.4
Q ss_pred ccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 344 IMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.++.||+|+|||.|.+|..+|..+...|.+|+++.+.|.
T Consensus 187 ~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 187 VDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp CCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred cccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 356899999999999999999999999999999988774
No 339
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=95.63 E-value=0.03 Score=61.43 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=32.3
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
.+++|.|||.|.+|..+|..++.+|.+|+++++.+
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 205 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD 205 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC
Confidence 46999999999999999999999999999998755
No 340
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=95.63 E-value=0.046 Score=59.78 Aligned_cols=35 Identities=29% Similarity=0.483 Sum_probs=32.4
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
.+++|.|||.|.||..+|..++.+|.+|+++++.+
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 204 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP 204 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 36999999999999999999999999999998765
No 341
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.62 E-value=0.044 Score=59.92 Aligned_cols=36 Identities=17% Similarity=0.197 Sum_probs=32.8
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.+++|.|||.|.+|..+|..++.+|.+|+++++.+.
T Consensus 166 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 201 (450)
T 1ges_A 166 LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDA 201 (450)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCc
Confidence 378999999999999999999999999999987653
No 342
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.62 E-value=0.041 Score=58.47 Aligned_cols=87 Identities=20% Similarity=0.150 Sum_probs=59.0
Q ss_pred cEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHH---Hhh--------c-Ccee-cCHHHHhccCcEEEEcCCCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQ---ASM--------E-GYEV-TTMEEAAKEGGIFVTTTGCK 414 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~---a~~--------~-G~~v-~~Leell~~aDiIi~atgt~ 414 (718)
++|+|||.|.+|..+|..+...|. +|.++|+++..... ... . -+.. .++ +.++.||+|+.+.+..
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg~p 93 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAGVP 93 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 689999999999999999988888 99999998754221 000 1 1222 456 7889999999985432
Q ss_pred ---CC-----------cCH---HHHhcCCCCeEEEEcCC
Q psy7896 415 ---DI-----------IRG---EHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 415 ---~l-----------I~~---e~l~~MK~gAiLIN~GR 436 (718)
++ +-. +.+....++++++|++.
T Consensus 94 ~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 132 (328)
T 2hjr_A 94 RKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITN 132 (328)
T ss_dssp CCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 22 011 12333357889988755
No 343
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=95.62 E-value=0.011 Score=62.67 Aligned_cols=90 Identities=17% Similarity=0.120 Sum_probs=64.9
Q ss_pred ccCcEEEEEe-cChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-ec-----CHHH-Hh-----ccCcEEEEcCC
Q psy7896 346 LAGKVAVVAG-YGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-VT-----TMEE-AA-----KEGGIFVTTTG 412 (718)
Q Consensus 346 L~GktVGIIG-~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v~-----~Lee-ll-----~~aDiIi~atg 412 (718)
-.|++|.|+| .|.||..+++.++..|++|+++++++.+...+...|.. +. +..+ +. ...|+++.+.|
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G 240 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIG 240 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSC
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCC
Confidence 3689999999 79999999999999999999998876543323223432 11 2222 22 14799998888
Q ss_pred CCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 413 CKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
.. . -...++.|+++..++.+|..
T Consensus 241 ~~-~-~~~~~~~l~~~G~iv~~G~~ 263 (354)
T 2j8z_A 241 GS-Y-WEKNVNCLALDGRWVLYGLM 263 (354)
T ss_dssp GG-G-HHHHHHHEEEEEEEEECCCT
T ss_pred ch-H-HHHHHHhccCCCEEEEEecc
Confidence 74 2 34568889999999999864
No 344
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.59 E-value=0.01 Score=61.86 Aligned_cols=89 Identities=17% Similarity=0.139 Sum_probs=63.5
Q ss_pred cCcEEEEEe-cChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-ec-----CHHH-Hh-----ccCcEEEEcCCC
Q psy7896 347 AGKVAVVAG-YGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-VT-----TMEE-AA-----KEGGIFVTTTGC 413 (718)
Q Consensus 347 ~GktVGIIG-~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v~-----~Lee-ll-----~~aDiIi~atgt 413 (718)
.|++|.|+| .|.||..+++.++.+|++|+++++++.+...+...|.. +. +..+ +. ...|+++.+.|.
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 219 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGR 219 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCch
Confidence 689999999 79999999999999999999998876543322223332 11 2222 22 136899888872
Q ss_pred CCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 414 KDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 414 ~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
-.-...++.|+++..++.+|..
T Consensus 220 --~~~~~~~~~l~~~G~iv~~g~~ 241 (327)
T 1qor_A 220 --DTWERSLDCLQRRGLMVSFGNS 241 (327)
T ss_dssp --GGHHHHHHTEEEEEEEEECCCT
T ss_pred --HHHHHHHHHhcCCCEEEEEecC
Confidence 2234668889999999998864
No 345
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=95.59 E-value=0.021 Score=59.75 Aligned_cols=84 Identities=6% Similarity=-0.035 Sum_probs=56.6
Q ss_pred cEEEEEecChhHHHHHHHHHhC-CCEEE-EEecCCccHHHHh-hcCc--eecCHHHHh-ccCcEEEEcCCCCCCcCHHHH
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLF-GSRVI-VTEIDPINALQAS-MEGY--EVTTMEEAA-KEGGIFVTTTGCKDIIRGEHF 422 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~f-Ga~Vi-v~d~dp~~al~a~-~~G~--~v~~Leell-~~aDiIi~atgt~~lI~~e~l 422 (718)
.+|||||+|.||+..++.++.. +.++. ++|+++.+..... ..|. .+.++++++ .+.|+|++++.+. .--.-..
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~-~h~~~~~ 80 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNS-LHFAQAK 80 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGG-GHHHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChH-HHHHHHH
Confidence 3799999999999999998876 56754 7888776543322 2343 346899999 7899999988753 1111223
Q ss_pred hcCCCCe-EEEE
Q psy7896 423 LQMRDDA-IVCN 433 (718)
Q Consensus 423 ~~MK~gA-iLIN 433 (718)
..++.|. +++.
T Consensus 81 ~al~~gk~V~~E 92 (325)
T 2ho3_A 81 AALSAGKHVILE 92 (325)
T ss_dssp HHHHTTCEEEEE
T ss_pred HHHHcCCcEEEe
Confidence 3455554 5554
No 346
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=95.59 E-value=0.017 Score=61.25 Aligned_cols=66 Identities=11% Similarity=-0.014 Sum_probs=50.6
Q ss_pred cEEEEEecChhHHHHHHHHHhC-CCEEE-EEecCCccHHHH-hhcCce-ecCHHHHh--ccCcEEEEcCCCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLF-GSRVI-VTEIDPINALQA-SMEGYE-VTTMEEAA--KEGGIFVTTTGCK 414 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~f-Ga~Vi-v~d~dp~~al~a-~~~G~~-v~~Leell--~~aDiIi~atgt~ 414 (718)
.+|||||+|.||+..++.++.. |++++ ++|+++.+.... ...|.. +.++++++ .+.|+|++++.+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~ 77 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPND 77 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTT
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChH
Confidence 5899999999999999999887 78865 688887654332 223443 46899999 5689999987763
No 347
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=95.58 E-value=0.013 Score=61.33 Aligned_cols=90 Identities=20% Similarity=0.213 Sum_probs=64.3
Q ss_pred ccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-e-----cCHHH----Hh--ccCcEEEEcCC
Q psy7896 346 LAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-V-----TTMEE----AA--KEGGIFVTTTG 412 (718)
Q Consensus 346 L~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v-----~~Lee----ll--~~aDiIi~atg 412 (718)
-.|++|.|+|. |.||+.+++.++.+|++|+++++++.+...+...|.. + .+..+ +. +..|+++.++|
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g 223 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIG 223 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSC
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCc
Confidence 36899999995 9999999999999999999998877443222223332 1 12222 22 24799998887
Q ss_pred CCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 413 CKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
. .. -...++.|+++..++.+|..
T Consensus 224 ~-~~-~~~~~~~l~~~G~iv~~g~~ 246 (333)
T 1wly_A 224 K-DT-LQKSLDCLRPRGMCAAYGHA 246 (333)
T ss_dssp T-TT-HHHHHHTEEEEEEEEECCCT
T ss_pred H-HH-HHHHHHhhccCCEEEEEecC
Confidence 6 22 34678889999999999864
No 348
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=95.58 E-value=0.018 Score=61.50 Aligned_cols=75 Identities=23% Similarity=0.188 Sum_probs=53.3
Q ss_pred ccceEEEecCCcccccccccccchhhHHHHH------hh----------hcccccCCcEEEEEecCCCChhHHHHHHhcC
Q psy7896 229 LGVPAINVNDSVTKSKFDNLYGCRESLVDGL------KR----------ATDIMLAGKVAVVAGYGDVGKGCAQSLRLFG 292 (718)
Q Consensus 229 l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i------~r----------~t~~~~~Gk~vvViGyG~vG~~~A~aLra~G 292 (718)
.+++|.|+.+.......|...+.-=++.+.+ .| ..+..+.|+++.|||+|.+|..+|+.|+++|
T Consensus 89 ~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G 168 (330)
T 4e5n_A 89 RGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQGWG 168 (330)
T ss_dssp TTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTTSC
T ss_pred cCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHHCC
Confidence 4678888887777666665554211111111 11 1123478999999999999999999999999
Q ss_pred CeEEEeecCch
Q psy7896 293 SRVIVTEIDPI 303 (718)
Q Consensus 293 v~VtV~D~dp~ 303 (718)
++|.+++..+.
T Consensus 169 ~~V~~~d~~~~ 179 (330)
T 4e5n_A 169 ATLQYHEAKAL 179 (330)
T ss_dssp CEEEEECSSCC
T ss_pred CEEEEECCCCC
Confidence 99999988763
No 349
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.57 E-value=0.019 Score=62.47 Aligned_cols=35 Identities=23% Similarity=0.192 Sum_probs=32.5
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
.+++|.|||.|.+|..+|..++.+|.+|++++..+
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~ 182 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA 182 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC
Confidence 48999999999999999999999999999998655
No 350
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=95.54 E-value=0.04 Score=57.90 Aligned_cols=87 Identities=15% Similarity=0.141 Sum_probs=60.8
Q ss_pred cEEEEEecChhHHHHHHHHHhCCC--EEEEEecCCccHH------HHhh----cCcee---cCHHHHhccCcEEEEcCCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGS--RVIVTEIDPINAL------QASM----EGYEV---TTMEEAAKEGGIFVTTTGC 413 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa--~Viv~d~dp~~al------~a~~----~G~~v---~~Leell~~aDiIi~atgt 413 (718)
++|+|||.|.+|..+|..+...|. +|.++|+++.+.. .... ....+ .+ .+.++.||+|+++.|.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 479999999999999999977776 9999999885431 1111 11122 25 7889999999998653
Q ss_pred C---CC-----c--C-------HHHHhcCCCCeEEEEcCC
Q psy7896 414 K---DI-----I--R-------GEHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 414 ~---~l-----I--~-------~e~l~~MK~gAiLIN~GR 436 (718)
. ++ + | .+.+....+++++++++.
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN 119 (294)
T 1oju_A 80 ARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 2 22 1 1 123556688999999885
No 351
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=95.54 E-value=0.018 Score=60.97 Aligned_cols=67 Identities=19% Similarity=0.272 Sum_probs=51.4
Q ss_pred CcEEEEEecChhHHHHHHHHHhC--CCEEE-EEecCCccHHHH-hhcCce-ecCHHHHhc--cCcEEEEcCCCC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLF--GSRVI-VTEIDPINALQA-SMEGYE-VTTMEEAAK--EGGIFVTTTGCK 414 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~f--Ga~Vi-v~d~dp~~al~a-~~~G~~-v~~Leell~--~aDiIi~atgt~ 414 (718)
-.+|||||+|.||+..++.++.. +++++ ++|+++.++... ...|.. +.+++++++ +.|+|++++.+.
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 86 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSG 86 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGG
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcH
Confidence 36899999999999999999877 78866 788887654332 223543 468999997 789999988763
No 352
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=95.53 E-value=0.0072 Score=63.13 Aligned_cols=90 Identities=16% Similarity=0.148 Sum_probs=66.9
Q ss_pred ccCcEEEEEe-cChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-e-----cC-HHHHhccCcEEEEcCCCCCCc
Q psy7896 346 LAGKVAVVAG-YGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-V-----TT-MEEAAKEGGIFVTTTGCKDII 417 (718)
Q Consensus 346 L~GktVGIIG-~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v-----~~-Leell~~aDiIi~atgt~~lI 417 (718)
-.|++|.|+| .|.||..+++.++.+|++|+++..+. +...+...|.. + .+ +.+.++..|+++.++|....
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~~~~- 228 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVG- 228 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCHHHH-
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCcHHH-
Confidence 4689999997 99999999999999999999886432 22222333443 1 12 55556778999998886543
Q ss_pred CHHHHhcCCCCeEEEEcCCCC
Q psy7896 418 RGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 418 ~~e~l~~MK~gAiLIN~GRgd 438 (718)
...++.++++..++.+|...
T Consensus 229 -~~~~~~l~~~G~iv~~g~~~ 248 (321)
T 3tqh_A 229 -IQSIDCLKETGCIVSVPTIT 248 (321)
T ss_dssp -HHHGGGEEEEEEEEECCSTT
T ss_pred -HHHHHhccCCCEEEEeCCCC
Confidence 67889999999999987643
No 353
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.52 E-value=0.024 Score=62.19 Aligned_cols=34 Identities=32% Similarity=0.310 Sum_probs=31.7
Q ss_pred CcEEEEEecChhHHHHHHHHHhC-CCEEEEEecCC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLF-GSRVIVTEIDP 381 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~f-Ga~Viv~d~dp 381 (718)
++++.|||.|.+|..+|..++.+ |.+|+++++.+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~ 193 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD 193 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC
Confidence 79999999999999999999999 99999998655
No 354
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=95.49 E-value=0.014 Score=61.55 Aligned_cols=89 Identities=17% Similarity=0.225 Sum_probs=57.1
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCC--EEEEEecCCccHHH-H--hhcC-------cee-cCHHHHhccCcEEEEcCCCC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGS--RVIVTEIDPINALQ-A--SMEG-------YEV-TTMEEAAKEGGIFVTTTGCK 414 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa--~Viv~d~dp~~al~-a--~~~G-------~~v-~~Leell~~aDiIi~atgt~ 414 (718)
-++|+|||.|.||..+|..++..|. +|.++|+++.+... + ..+. ..+ .+..+.++.||+|+++.+..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCC
Confidence 3689999999999999998876554 89999998753211 0 1111 111 12456789999999985432
Q ss_pred C---C-----c------C---HHHHhcCCCCeEEEEcCC
Q psy7896 415 D---I-----I------R---GEHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 415 ~---l-----I------~---~e~l~~MK~gAiLIN~GR 436 (718)
. + + - .+.+....++++++|++.
T Consensus 86 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN 124 (316)
T 1ldn_A 86 QKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN 124 (316)
T ss_dssp CCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred CCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 1 1 0 0 122333457888888866
No 355
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=95.49 E-value=0.018 Score=60.41 Aligned_cols=83 Identities=16% Similarity=0.165 Sum_probs=56.5
Q ss_pred cEEEEEecChhHHHHHHHHH-h-CCCEE-EEEecCCccHHHH-hhcCc--eecCHHHHhc--cCcEEEEcCCCCCCcCHH
Q psy7896 349 KVAVVAGYGDVGKGCAQSLR-L-FGSRV-IVTEIDPINALQA-SMEGY--EVTTMEEAAK--EGGIFVTTTGCKDIIRGE 420 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~-~-fGa~V-iv~d~dp~~al~a-~~~G~--~v~~Leell~--~aDiIi~atgt~~lI~~e 420 (718)
.+|||||+|.||+..++.++ . -|+++ .++|+++.+.... ...|. .+.++++++. +.|+|++++.+... -.-
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h-~~~ 87 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFH-PEM 87 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGH-HHH
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhH-HHH
Confidence 58999999999999999887 5 47775 4688887654322 22354 2468999986 68999998876321 122
Q ss_pred HHhcCCCCe-EEE
Q psy7896 421 HFLQMRDDA-IVC 432 (718)
Q Consensus 421 ~l~~MK~gA-iLI 432 (718)
....++.|. +++
T Consensus 88 ~~~al~~G~~v~~ 100 (346)
T 3cea_A 88 TIYAMNAGLNVFC 100 (346)
T ss_dssp HHHHHHTTCEEEE
T ss_pred HHHHHHCCCEEEE
Confidence 334566665 444
No 356
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=95.48 E-value=0.042 Score=56.43 Aligned_cols=37 Identities=24% Similarity=0.316 Sum_probs=33.5
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
+.+++|.|||.|.+|..+|..+...|.+|+++++.+.
T Consensus 150 ~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~ 186 (335)
T 2zbw_A 150 FQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQ 186 (335)
T ss_dssp GTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCc
Confidence 4689999999999999999999999999999987653
No 357
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.47 E-value=0.032 Score=61.00 Aligned_cols=36 Identities=31% Similarity=0.300 Sum_probs=32.9
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.+++|.|||.|.||..+|..++.+|.+|+++++.+.
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 469999999999999999999999999999987653
No 358
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=95.47 E-value=0.019 Score=59.55 Aligned_cols=67 Identities=10% Similarity=0.044 Sum_probs=50.7
Q ss_pred CcEEEEEecChhHHH-HHHHHHh-CCCEEE-EEecCCccHHHH-hhcCce-ecCHHHHhccCcEEEEcCCCC
Q psy7896 348 GKVAVVAGYGDVGKG-CAQSLRL-FGSRVI-VTEIDPINALQA-SMEGYE-VTTMEEAAKEGGIFVTTTGCK 414 (718)
Q Consensus 348 GktVGIIG~G~IG~~-vA~~l~~-fGa~Vi-v~d~dp~~al~a-~~~G~~-v~~Leell~~aDiIi~atgt~ 414 (718)
-.+|||||+|+||+. .++.++. -+++++ ++|+++.++... ...|.. +.++++++.+.|+|++++.+.
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~ 77 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTE 77 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGG
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcH
Confidence 468999999999996 8887876 477877 788888654332 223433 568999999999999987763
No 359
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=95.47 E-value=0.051 Score=55.33 Aligned_cols=35 Identities=20% Similarity=0.116 Sum_probs=32.5
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
.+++|.|||.|.+|..+|..++.+|.+|+++++.+
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 58999999999999999999999999999998665
No 360
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=95.46 E-value=0.028 Score=63.13 Aligned_cols=90 Identities=20% Similarity=0.305 Sum_probs=58.9
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEE-Ee-------cCCcc--HHHHh--hcC-------ceecCHHHHh-ccC
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIV-TE-------IDPIN--ALQAS--MEG-------YEVTTMEEAA-KEG 404 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv-~d-------~dp~~--al~a~--~~G-------~~v~~Leell-~~a 404 (718)
+|.|+||.|.|+|++|+.+|+.|..+|++|+. .| .+-.. .+... ..| .+..+ ++++ -.|
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~-~~il~~~~ 319 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYE-GSILEVDC 319 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEEC-SCGGGSCC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeec-cccccccc
Confidence 68999999999999999999999999999886 33 12111 11110 111 11211 1443 379
Q ss_pred cEEEEcCCCCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 405 GIFVTTTGCKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 405 DiIi~atgt~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
||++.|... +.|+.+...+++.. +++-.+.+
T Consensus 320 DIliPcA~~-n~I~~~na~~l~ak-iV~EgAN~ 350 (501)
T 3mw9_A 320 DILIPAASE-KQLTKSNAPRVKAK-IIAEGANG 350 (501)
T ss_dssp SEEEECSSS-CCBCTTTGGGCCCS-EEECCSSS
T ss_pred eEEeecccc-CccCHhHHHHcCce-EEEeCCCC
Confidence 999987544 78999999888742 34433443
No 361
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=95.46 E-value=0.017 Score=60.93 Aligned_cols=66 Identities=12% Similarity=0.165 Sum_probs=50.5
Q ss_pred cEEEEEecChhHHHHHHHHHhC-CCEEE-EEecCCccHHHH-hhcCc--eecCHHHHhc--cCcEEEEcCCCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLF-GSRVI-VTEIDPINALQA-SMEGY--EVTTMEEAAK--EGGIFVTTTGCK 414 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~f-Ga~Vi-v~d~dp~~al~a-~~~G~--~v~~Leell~--~aDiIi~atgt~ 414 (718)
.+|||||+|.||+..++.++.. +++++ ++|+++.+.... ...|. .+.++++++. +.|+|++++.+.
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 75 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTN 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGG
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCc
Confidence 4799999999999999998775 67766 688887654332 22343 3578999998 799999988763
No 362
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=95.45 E-value=0.054 Score=59.34 Aligned_cols=35 Identities=23% Similarity=0.169 Sum_probs=32.4
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
.+++|.|||.|.+|..+|..++.+|.+|+++++.+
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 213 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD 213 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Confidence 47899999999999999999999999999998765
No 363
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.42 E-value=0.019 Score=63.38 Aligned_cols=68 Identities=24% Similarity=0.300 Sum_probs=50.3
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCcc---HH-HHhhcCceec---CHHHHhcc-CcEEEEcCC
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPIN---AL-QASMEGYEVT---TMEEAAKE-GGIFVTTTG 412 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~---al-~a~~~G~~v~---~Leell~~-aDiIi~atg 412 (718)
++.||+|.|||.|.+|+++|+.|+..|++|+++|..+.. .. .....|..+. ..++++.. +|+||..++
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spg 81 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPG 81 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTT
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCc
Confidence 468999999999999999999999999999999986531 11 1123466542 23345666 899998654
No 364
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.41 E-value=0.065 Score=58.86 Aligned_cols=35 Identities=34% Similarity=0.463 Sum_probs=32.3
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
.+++|.|||.|.+|..+|..++.+|.+|+++++.+
T Consensus 165 ~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~ 199 (463)
T 2r9z_A 165 QPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALED 199 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 36899999999999999999999999999998765
No 365
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.40 E-value=0.011 Score=62.50 Aligned_cols=91 Identities=15% Similarity=0.196 Sum_probs=63.2
Q ss_pred ccCcEEEEEecC-hhHHHHHHHHHhC-CCEEEEEecCCccHHHHhhcCce-ec-----C----HHHHh--ccCcEEEEcC
Q psy7896 346 LAGKVAVVAGYG-DVGKGCAQSLRLF-GSRVIVTEIDPINALQASMEGYE-VT-----T----MEEAA--KEGGIFVTTT 411 (718)
Q Consensus 346 L~GktVGIIG~G-~IG~~vA~~l~~f-Ga~Viv~d~dp~~al~a~~~G~~-v~-----~----Leell--~~aDiIi~at 411 (718)
-.|++|.|+|.| .||..+++.++.+ |++|+++++++.+...+...|.. +. + +.++. ...|+++.+.
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 248 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLN 248 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEEEECC
Confidence 368999999999 9999999999998 99999998877543323223432 11 1 22333 2468888887
Q ss_pred CCCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 412 GCKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 412 gt~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
|....+. ..++.|+++..++.+|..
T Consensus 249 g~~~~~~-~~~~~l~~~G~iv~~g~~ 273 (347)
T 1jvb_A 249 NSEKTLS-VYPKALAKQGKYVMVGLF 273 (347)
T ss_dssp CCHHHHT-TGGGGEEEEEEEEECCSS
T ss_pred CCHHHHH-HHHHHHhcCCEEEEECCC
Confidence 7542332 456778888888888754
No 366
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=95.39 E-value=0.018 Score=63.76 Aligned_cols=67 Identities=18% Similarity=0.149 Sum_probs=49.9
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhh--cCce-----ec---CHHHHhccCcEEEEcCCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASM--EGYE-----VT---TMEEAAKEGGIFVTTTGC 413 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~--~G~~-----v~---~Leell~~aDiIi~atgt 413 (718)
.+|+|+|+|.|.||+.+++.|...|.+|+++++++.+...... .+.. +. ++.++++.+|+|+.+++.
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~ 78 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPY 78 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCcc
Confidence 4789999999999999999999999999999988754322211 1121 22 345778899999998764
No 367
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=95.39 E-value=0.016 Score=63.38 Aligned_cols=90 Identities=18% Similarity=0.199 Sum_probs=65.9
Q ss_pred ccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cC------------------------HHH
Q psy7896 346 LAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TT------------------------MEE 399 (718)
Q Consensus 346 L~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~------------------------Lee 399 (718)
-.|++|.|+|. |.||..+++.++.+|++|++++.++.+...+...|... .+ .++
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL 298 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHH
Confidence 46899999998 99999999999999999999887665543333445421 11 111
Q ss_pred ---Hh-ccCcEEEEcCCCCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 400 ---AA-KEGGIFVTTTGCKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 400 ---ll-~~aDiIi~atgt~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
+. +..|+++.++|.. .-...+..|+++..++++|..
T Consensus 299 v~~~~g~g~Dvvid~~G~~--~~~~~~~~l~~~G~iv~~G~~ 338 (447)
T 4a0s_A 299 VVEKAGREPDIVFEHTGRV--TFGLSVIVARRGGTVVTCGSS 338 (447)
T ss_dssp HHHHHSSCCSEEEECSCHH--HHHHHHHHSCTTCEEEESCCT
T ss_pred HHHHhCCCceEEEECCCch--HHHHHHHHHhcCCEEEEEecC
Confidence 11 2489999988863 224667899999999999864
No 368
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=95.38 E-value=0.016 Score=60.91 Aligned_cols=67 Identities=15% Similarity=-0.015 Sum_probs=51.1
Q ss_pred CcEEEEEecChhHHHHHHHHHhC-CCEEE-EEecCCccHHHH-hhcCc--eecCHHHHhc--cCcEEEEcCCCC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLF-GSRVI-VTEIDPINALQA-SMEGY--EVTTMEEAAK--EGGIFVTTTGCK 414 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~f-Ga~Vi-v~d~dp~~al~a-~~~G~--~v~~Leell~--~aDiIi~atgt~ 414 (718)
-.+|||||+|.||+..++.++.. +++|+ ++|+++.++... ...|. .+.++++++. +.|+|++++.+.
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 78 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQ 78 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGG
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCH
Confidence 35899999999999999999885 67766 678887654332 23344 3568999997 789999987763
No 369
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.36 E-value=0.063 Score=58.57 Aligned_cols=36 Identities=28% Similarity=0.268 Sum_probs=32.6
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.+++|.|||.|.+|..+|..++.+|.+|++++..+.
T Consensus 166 ~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~ 201 (455)
T 2yqu_A 166 VPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDR 201 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 468999999999999999999999999999987653
No 370
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.35 E-value=0.027 Score=61.80 Aligned_cols=36 Identities=28% Similarity=0.300 Sum_probs=32.7
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.+++|.|||.|.+|..+|..++.+|.+|+++++.+.
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 205 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 378999999999999999999999999999987653
No 371
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.35 E-value=0.012 Score=62.00 Aligned_cols=91 Identities=22% Similarity=0.247 Sum_probs=67.5
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhC-CCEEEEEecCCccHHHHhhcCceec-----CHHH----Hhc--cCcEEEEcCCC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLF-GSRVIVTEIDPINALQASMEGYEVT-----TMEE----AAK--EGGIFVTTTGC 413 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~f-Ga~Viv~d~dp~~al~a~~~G~~v~-----~Lee----ll~--~aDiIi~atgt 413 (718)
-.|.+|.|+|.|.||...++.++.+ |++|++++.++.+...+...|...+ ++.+ +.. ..|+++-+.|.
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~ 249 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGA 249 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCC
Confidence 4689999999999999999999998 7899999888766544444554311 2222 222 57999988887
Q ss_pred CCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 414 KDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 414 ~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
...+ ...++.++++..++.+|..
T Consensus 250 ~~~~-~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 250 QSTI-DTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp HHHH-HHHHHHEEEEEEEEECSCC
T ss_pred HHHH-HHHHHHHhcCCEEEEECCC
Confidence 5333 3568889999999999864
No 372
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=95.34 E-value=0.031 Score=58.68 Aligned_cols=89 Identities=12% Similarity=0.025 Sum_probs=59.9
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHh------------hcCcee-cCHHHHhccCcEEEEcCCC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQAS------------MEGYEV-TTMEEAAKEGGIFVTTTGC 413 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~------------~~G~~v-~~Leell~~aDiIi~atgt 413 (718)
.++|+|||.|.+|..+|..+...|. +|.++|+++....... ...+.. .++ +.++.+|+|+.+.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 4689999999999999999988887 9999999875422110 011222 456 778999999998643
Q ss_pred C---CCc-----------CHH---HHhcCCCCeEEEEcCCC
Q psy7896 414 K---DII-----------RGE---HFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 414 ~---~lI-----------~~e---~l~~MK~gAiLIN~GRg 437 (718)
. ++- -.+ .+....+++++++++..
T Consensus 83 p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp 123 (317)
T 2ewd_A 83 PGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNP 123 (317)
T ss_dssp SSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred CCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCCh
Confidence 2 110 011 12233568999988764
No 373
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=95.33 E-value=0.029 Score=59.47 Aligned_cols=63 Identities=16% Similarity=0.144 Sum_probs=47.0
Q ss_pred cEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHH---Hhhc-------C--cee-cCHHHHhccCcEEEEcCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQ---ASME-------G--YEV-TTMEEAAKEGGIFVTTTG 412 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~---a~~~-------G--~~v-~~Leell~~aDiIi~atg 412 (718)
++|+|||.|.+|..+|..+...|. +|.++|+++.+... ...+ . +.. .++ +.++.||+|+.+.+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g 81 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAG 81 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 589999999999999999988887 89999998754211 0011 1 222 456 78999999999853
No 374
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=95.33 E-value=0.019 Score=58.83 Aligned_cols=39 Identities=3% Similarity=0.008 Sum_probs=32.3
Q ss_pred ccccCcEEEEEecChh-HHHHHHHHHhCCCEEEEEecCCc
Q psy7896 344 IMLAGKVAVVAGYGDV-GKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 344 ~eL~GktVGIIG~G~I-G~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.+++++++.|||.|.+ +..+|..++.+|.+|++...++.
T Consensus 142 ~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~ 181 (304)
T 4fk1_A 142 WELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNE 181 (304)
T ss_dssp GGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCC
T ss_pred hHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEecccc
Confidence 4578899999999975 67899999999999999876543
No 375
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=95.33 E-value=0.04 Score=58.83 Aligned_cols=90 Identities=20% Similarity=0.126 Sum_probs=64.8
Q ss_pred ccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-e-----cCHHHHhc-----cCcEEEEcCCC
Q psy7896 346 LAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-V-----TTMEEAAK-----EGGIFVTTTGC 413 (718)
Q Consensus 346 L~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v-----~~Leell~-----~aDiIi~atgt 413 (718)
-.|++|.|+|. |.||..+++.++.+|++|+++. ++.+...+...|.. + .++.+.++ ..|+++-++|.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~ 241 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITN 241 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCS
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCc
Confidence 47899999999 8999999999999999998874 56554444445543 1 12333332 37999998886
Q ss_pred CCCcCHHHHhcC-CCCeEEEEcCCC
Q psy7896 414 KDIIRGEHFLQM-RDDAIVCNIGHF 437 (718)
Q Consensus 414 ~~lI~~e~l~~M-K~gAiLIN~GRg 437 (718)
...+ ...++.+ +++..++.+|..
T Consensus 242 ~~~~-~~~~~~l~~~~G~iv~~g~~ 265 (371)
T 3gqv_A 242 VEST-TFCFAAIGRAGGHYVSLNPF 265 (371)
T ss_dssp HHHH-HHHHHHSCTTCEEEEESSCC
T ss_pred hHHH-HHHHHHhhcCCCEEEEEecC
Confidence 4333 3456778 689999999854
No 376
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=95.32 E-value=0.055 Score=55.40 Aligned_cols=34 Identities=24% Similarity=0.265 Sum_probs=31.2
Q ss_pred cEEEEEecCCCChhHHHHHHhcCCeEEEeecCch
Q psy7896 270 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 303 (718)
Q Consensus 270 k~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~ 303 (718)
.+++|||.|+.|+.+|..|+++|.+|+++|..+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~ 37 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEAS 37 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 4799999999999999999999999999997753
No 377
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=95.31 E-value=0.29 Score=52.94 Aligned_cols=170 Identities=11% Similarity=0.015 Sum_probs=110.7
Q ss_pred cchhhHHHHHhhhcccccCCcEEEEEecCCCC---------hhHHHHHHhcCCeEEEeecCchhhhhhhhhhhhhhHHHH
Q psy7896 250 GCRESLVDGLKRATDIMLAGKVAVVAGYGDVG---------KGCAQSLRLFGSRVIVTEIDPINALQASMEGYELDEEVA 320 (718)
Q Consensus 250 G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG---------~~~A~aLra~Gv~VtV~D~dp~r~v~AvaeGf~L~r~i~ 320 (718)
|.+||+.|.+.--.. + --+.|+...+.+ -.+..+++--+++|++.-.+. .=.|++++-|.+-+
T Consensus 110 ~kgEsl~DTarvLs~-y---~D~IviR~~~~~~~~~~~~~~~~~~~lA~~~~vPVINag~g~-HPtQaLaDl~TI~E--- 181 (359)
T 1zq6_A 110 DTEEHIAEVARVLGR-Y---VDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVPVINMETIT-HPCQELAHALALQE--- 181 (359)
T ss_dssp SCCEEHHHHHHHHHH-H---CSEEEEECCCCSSCHHHHTTCHHHHHHHHHCSSCEEESSSSC-CHHHHHHHHHHHHH---
T ss_pred CCCCcHHHHHHHHHH-h---CcEEEEeccccccccccccchHHHHHHHHhCCCCEEeCCCCC-CcHHHHHHHHHHHH---
Confidence 557888876653222 1 124445444222 223444566678999877666 66677777665532
Q ss_pred HHHHHHhcccccccchhhhhhhccc-ccCcE--EEEEec----C-hhHHHHHHHHHhCCCEEEEEecC-Ccc---HHH--
Q psy7896 321 ALHLEHLGVKLTKLTEDQAKYLDIM-LAGKV--AVVAGY----G-DVGKGCAQSLRLFGSRVIVTEID-PIN---ALQ-- 386 (718)
Q Consensus 321 ~~~l~~lgv~~~~~~~~~~~~~g~e-L~Gkt--VGIIG~----G-~IG~~vA~~l~~fGa~Viv~d~d-p~~---al~-- 386 (718)
..|.. +.|++ |+++|- | ++....+..+..||++|.++-+. ... ...
T Consensus 182 --------------------~~g~~~l~glkvvva~vGDl~~~~nrva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~ 241 (359)
T 1zq6_A 182 --------------------HFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDW 241 (359)
T ss_dssp --------------------HHTSSCCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHH
T ss_pred --------------------HhCCCcccCCeeEEEEEecccccccchHHHHHHHHHHcCCEEEEEcCccccCCCHHHHHH
Confidence 12332 88999 999997 3 79999999999999999998654 211 111
Q ss_pred H----hhcCce---ecCHHHHhccCcEEEEcC-------CC------------CCCcCHHHHhcCCCCeEEEEcCCC--C
Q psy7896 387 A----SMEGYE---VTTMEEAAKEGGIFVTTT-------GC------------KDIIRGEHFLQMRDDAIVCNIGHF--D 438 (718)
Q Consensus 387 a----~~~G~~---v~~Leell~~aDiIi~at-------gt------------~~lI~~e~l~~MK~gAiLIN~GRg--d 438 (718)
+ ...|.. ..+++|+++.+|||.+.. |. ...++.+.++.+| ++++.-+.-. +
T Consensus 242 ~~~~a~~~g~~v~~~~d~~eav~~aDvVyt~~w~se~~mg~~~~~~~~~~~~~~y~vt~e~l~~a~-~ai~MHcLP~~Rg 320 (359)
T 1zq6_A 242 AAQNVAESGGSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTN-NGVFSHCLPLRRN 320 (359)
T ss_dssp HHHHHHHHSCEEEEECCHHHHHTTCSEEEEECCCCGGGTTCCTTHHHHHGGGGGGSBCHHHHHTSS-SCEEECCSCCCBT
T ss_pred HHHHHHHcCCeEEEECCHHHHhcCCCEEEECCccccccCCcchhhHHHHHHhcCCCCCHHHHHhCC-CCEEECCCCCCCC
Confidence 0 122332 358999999999998742 21 1348999999999 9999988752 3
Q ss_pred ccccHHHHhc
Q psy7896 439 CEIQVSWLDK 448 (718)
Q Consensus 439 ~Eid~~aL~~ 448 (718)
.||+.+-+..
T Consensus 321 ~EI~~eV~d~ 330 (359)
T 1zq6_A 321 VKATDAVMDS 330 (359)
T ss_dssp TTBCHHHHTS
T ss_pred ceeCHHHhCC
Confidence 5787654443
No 378
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=95.30 E-value=0.058 Score=59.03 Aligned_cols=35 Identities=26% Similarity=0.227 Sum_probs=32.2
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
.+++|.|||.|.+|..+|..++.+|.+|+++++.+
T Consensus 175 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 209 (467)
T 1zk7_A 175 IPERLAVIGSSVVALELAQAFARLGSKVTVLARNT 209 (467)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC
Confidence 37999999999999999999999999999998655
No 379
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=95.24 E-value=0.027 Score=60.11 Aligned_cols=64 Identities=22% Similarity=0.284 Sum_probs=47.7
Q ss_pred cEEEEEecChhHHH-HHHHHHhC-CCEEE-EEecCCccHHHHhhcCce-ecCHHHHhc--cCcEEEEcCCC
Q psy7896 349 KVAVVAGYGDVGKG-CAQSLRLF-GSRVI-VTEIDPINALQASMEGYE-VTTMEEAAK--EGGIFVTTTGC 413 (718)
Q Consensus 349 ktVGIIG~G~IG~~-vA~~l~~f-Ga~Vi-v~d~dp~~al~a~~~G~~-v~~Leell~--~aDiIi~atgt 413 (718)
.+|||||+|.||+. .++.++.. +++|. ++|+++.+... ...+.. +.++++++. +.|+|+++|.+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 77 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKR-DLPDVTVIASPEAAVQHPDVDLVVIASPN 77 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHH-HCTTSEEESCHHHHHTCTTCSEEEECSCG
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh-hCCCCcEECCHHHHhcCCCCCEEEEeCCh
Confidence 58999999999997 67777766 77875 67888754432 222333 568999998 78999998776
No 380
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.24 E-value=0.056 Score=57.53 Aligned_cols=90 Identities=17% Similarity=0.169 Sum_probs=60.1
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHH------HHhh----cCcee---cCHHHHhccCcEEEEcC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINAL------QASM----EGYEV---TTMEEAAKEGGIFVTTT 411 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al------~a~~----~G~~v---~~Leell~~aDiIi~at 411 (718)
++.++|+|||.|.+|..+|..+...|. +|.++|+++.+.. .... ....+ .+. +.++.||+|+++.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaa 83 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTA 83 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECC
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEcc
Confidence 456799999999999999999987777 9999999886431 1110 11122 244 7899999999986
Q ss_pred CC---CCC-----c--CH-------HHHhcCCCCeEEEEcCC
Q psy7896 412 GC---KDI-----I--RG-------EHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 412 gt---~~l-----I--~~-------e~l~~MK~gAiLIN~GR 436 (718)
|. .++ + |. +.+....+++++++++.
T Consensus 84 g~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 84 GVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp SCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 53 222 1 11 22334468889999875
No 381
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=95.22 E-value=0.022 Score=53.14 Aligned_cols=85 Identities=16% Similarity=0.148 Sum_probs=59.9
Q ss_pred ccCcEEEEEec----ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec-CHHHHhccCcEEEEcCCCCC---Cc
Q psy7896 346 LAGKVAVVAGY----GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT-TMEEAAKEGGIFVTTTGCKD---II 417 (718)
Q Consensus 346 L~GktVGIIG~----G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~-~Leell~~aDiIi~atgt~~---lI 417 (718)
++-++|+|||. |++|..+++.++..|.+|..+ +|... ...|..+. +++|+....|+++++..... ++
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~v--np~~~---~i~G~~~~~s~~el~~~vDlvii~vp~~~v~~v~ 86 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPV--NPNYD---EIEGLKCYRSVRELPKDVDVIVFVVPPKVGLQVA 86 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--CTTCS---EETTEECBSSGGGSCTTCCEEEECSCHHHHHHHH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEe--CCCCC---eECCeeecCCHHHhCCCCCEEEEEeCHHHHHHHH
Confidence 46789999999 999999999999999985555 55431 12466554 78999889999999865422 22
Q ss_pred CHHHHhcCCCCeEEEEcCCC
Q psy7896 418 RGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 418 ~~e~l~~MK~gAiLIN~GRg 437 (718)
. + +..+..++++++++..
T Consensus 87 ~-~-~~~~g~~~i~~~~~~~ 104 (138)
T 1y81_A 87 K-E-AVEAGFKKLWFQPGAE 104 (138)
T ss_dssp H-H-HHHTTCCEEEECTTSC
T ss_pred H-H-HHHcCCCEEEEcCccH
Confidence 1 2 3336677888887654
No 382
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=95.22 E-value=0.026 Score=58.83 Aligned_cols=83 Identities=17% Similarity=0.256 Sum_probs=55.7
Q ss_pred EEEEEecChhHHHH-HHHHHhCCCEEE-EEecCCccHHH-HhhcCc--eecCHHHHhc--cCcEEEEcCCCCCCcCHHHH
Q psy7896 350 VAVVAGYGDVGKGC-AQSLRLFGSRVI-VTEIDPINALQ-ASMEGY--EVTTMEEAAK--EGGIFVTTTGCKDIIRGEHF 422 (718)
Q Consensus 350 tVGIIG~G~IG~~v-A~~l~~fGa~Vi-v~d~dp~~al~-a~~~G~--~v~~Leell~--~aDiIi~atgt~~lI~~e~l 422 (718)
+|||||+|.+|+.. ++.+..-|.+++ ++|+++.+... +...|. .+.+++++++ +.|+|++++.+.. --.-..
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~-h~~~~~ 80 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNEL-HREQTL 80 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGG-HHHHHH
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhH-hHHHHH
Confidence 79999999999997 777666788866 68888765432 222344 2468999987 4999999887531 112223
Q ss_pred hcCCCCe-EEEE
Q psy7896 423 LQMRDDA-IVCN 433 (718)
Q Consensus 423 ~~MK~gA-iLIN 433 (718)
..++.|. +++.
T Consensus 81 ~al~~Gk~v~~e 92 (332)
T 2glx_A 81 AAIRAGKHVLCE 92 (332)
T ss_dssp HHHHTTCEEEEC
T ss_pred HHHHCCCeEEEe
Confidence 4566665 4443
No 383
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.20 E-value=0.016 Score=61.24 Aligned_cols=89 Identities=21% Similarity=0.325 Sum_probs=63.0
Q ss_pred cC--cEEEEEec-ChhHHHHHHHHHhCCC-EEEEEecCCccHHHHhh-cCce-ec-----CHHHHhc-----cCcEEEEc
Q psy7896 347 AG--KVAVVAGY-GDVGKGCAQSLRLFGS-RVIVTEIDPINALQASM-EGYE-VT-----TMEEAAK-----EGGIFVTT 410 (718)
Q Consensus 347 ~G--ktVGIIG~-G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~~-~G~~-v~-----~Leell~-----~aDiIi~a 410 (718)
.| ++|.|.|. |.||+.+++.++.+|+ +|+++++++.+...+.. .|.. +. +..+.+. ..|+++.+
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~ 237 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDN 237 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCEEEEC
Confidence 57 99999998 9999999999999999 99999887654332222 3432 11 2323322 36888888
Q ss_pred CCCCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 411 TGCKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 411 tgt~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
+|.. .-...++.|+++..++.+|..
T Consensus 238 ~G~~--~~~~~~~~l~~~G~iv~~G~~ 262 (357)
T 2zb4_A 238 VGGN--ISDTVISQMNENSHIILCGQI 262 (357)
T ss_dssp CCHH--HHHHHHHTEEEEEEEEECCCG
T ss_pred CCHH--HHHHHHHHhccCcEEEEECCc
Confidence 7742 234567888999999888763
No 384
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=95.20 E-value=0.084 Score=57.78 Aligned_cols=35 Identities=14% Similarity=0.149 Sum_probs=32.4
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
.++++.|||.|.+|..+|..++.+|.+|++++..+
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~ 203 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK 203 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 37999999999999999999999999999998765
No 385
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=95.17 E-value=0.005 Score=64.19 Aligned_cols=111 Identities=13% Similarity=-0.014 Sum_probs=70.5
Q ss_pred CCcEEEEEecCCCChhHHHHHHh--cCCeEEEeecCchhhhhhhhhhhhhhHH----HHHHHHHHhcccccccch-----
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRL--FGSRVIVTEIDPINALQASMEGYELDEE----VAALHLEHLGVKLTKLTE----- 336 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra--~Gv~VtV~D~dp~r~v~AvaeGf~L~r~----i~~~~l~~lgv~~~~~~~----- 336 (718)
....|+|||.||.|+.+|.+|.+ .|.+|+++|..+........-++.+.+. -....+..+|+++.....
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~~~~~~~~~ 143 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVK 143 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEECSSEEEES
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEECCcceecc
Confidence 34569999999999999998864 5999999997654322222223322210 011122334554431100
Q ss_pred --------hhhh--------------------hhcccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEe
Q psy7896 337 --------DQAK--------------------YLDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTE 378 (718)
Q Consensus 337 --------~~~~--------------------~~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d 378 (718)
+..+ ..+....++++.+||.|+++...|..+..++.++.+..
T Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~ 213 (326)
T 3fpz_A 144 HAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIEL 213 (326)
T ss_dssp CHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEE
T ss_pred eeEEEEcchhhhccccccceeecccccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEe
Confidence 0000 01234678999999999999999999999999888754
No 386
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.17 E-value=0.015 Score=56.61 Aligned_cols=88 Identities=9% Similarity=0.040 Sum_probs=56.2
Q ss_pred cEEEEEe-cChhHHHHHHHHH-hCCCEEEEEecCCc-cHHHH--hhcCcee--------cCHHHHhccCcEEEEcCCCCC
Q psy7896 349 KVAVVAG-YGDVGKGCAQSLR-LFGSRVIVTEIDPI-NALQA--SMEGYEV--------TTMEEAAKEGGIFVTTTGCKD 415 (718)
Q Consensus 349 ktVGIIG-~G~IG~~vA~~l~-~fGa~Viv~d~dp~-~al~a--~~~G~~v--------~~Leell~~aDiIi~atgt~~ 415 (718)
|+|.|.| .|.||+.+++.|. ..|++|++.++++. +..+. ...+..+ .+++++++..|+++.+.+..+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~n 85 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMESG 85 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCCC
Confidence 6799999 5999999999999 89999999988765 32211 1122221 234567788999988776432
Q ss_pred CcCHHHHhcCCC-C-eEEEEcCC
Q psy7896 416 IIRGEHFLQMRD-D-AIVCNIGH 436 (718)
Q Consensus 416 lI~~e~l~~MK~-g-AiLIN~GR 436 (718)
+-....+..|+. + ..+||++.
T Consensus 86 ~~~~~~~~~~~~~~~~~iv~iSs 108 (221)
T 3r6d_A 86 SDMASIVKALSRXNIRRVIGVSM 108 (221)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hhHHHHHHHHHhcCCCeEEEEee
Confidence 222233444432 2 25666654
No 387
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.16 E-value=0.039 Score=58.24 Aligned_cols=90 Identities=17% Similarity=0.188 Sum_probs=59.4
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCC--CEEEEEecCCccHHH-H--hhc-------Ccee-cCHHHHhccCcEEEEcCCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFG--SRVIVTEIDPINALQ-A--SME-------GYEV-TTMEEAAKEGGIFVTTTGC 413 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fG--a~Viv~d~dp~~al~-a--~~~-------G~~v-~~Leell~~aDiIi~atgt 413 (718)
...+|+|||.|.||..++..+...| -+|.++|+++.+... + ..+ ...+ .+..+.++.||+|+++.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~ 84 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGA 84 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCC
Confidence 4579999999999999999887656 489999988743211 0 011 1111 1346779999999998653
Q ss_pred C---CC-------cC-------HHHHhcCCCCeEEEEcCC
Q psy7896 414 K---DI-------IR-------GEHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 414 ~---~l-------I~-------~e~l~~MK~gAiLIN~GR 436 (718)
. +. .| .+.+....++++++|++-
T Consensus 85 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 124 (317)
T 3d0o_A 85 AQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATN 124 (317)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 2 21 00 123444578999999764
No 388
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.16 E-value=0.032 Score=60.86 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=32.5
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
.+++|.|||.|.+|..+|..++.+|.+|+++++.+
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 182 (452)
T 2cdu_A 148 KAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHE 182 (452)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred cCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 58999999999999999999999999999998765
No 389
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.16 E-value=0.028 Score=59.94 Aligned_cols=91 Identities=18% Similarity=0.164 Sum_probs=61.0
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCC--EEEEEecCCccHHH-H--hhcC-------cee-cCHHHHhccCcEEEEcCCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGS--RVIVTEIDPINALQ-A--SMEG-------YEV-TTMEEAAKEGGIFVTTTGC 413 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa--~Viv~d~dp~~al~-a--~~~G-------~~v-~~Leell~~aDiIi~atgt 413 (718)
..++|+|||.|.||..+|..+...|. +|.++|+++.+... + ..++ ..+ .+-.+.++.||+|+++.|+
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~ 83 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGA 83 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEeccc
Confidence 46789999999999999999977776 89999987754211 0 1222 121 1234678999999997553
Q ss_pred ---CCC-----c--C-------HHHHhcCCCCeEEEEcCCC
Q psy7896 414 ---KDI-----I--R-------GEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 414 ---~~l-----I--~-------~e~l~~MK~gAiLIN~GRg 437 (718)
.++ + | .+.+....++++++|++-.
T Consensus 84 p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNP 124 (326)
T 3pqe_A 84 NQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNP 124 (326)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCh
Confidence 222 1 1 1234455788999998863
No 390
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.14 E-value=0.017 Score=61.32 Aligned_cols=90 Identities=18% Similarity=0.185 Sum_probs=63.6
Q ss_pred ccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-ec-----CHHH-H---hc--cCcEEEEcCC
Q psy7896 346 LAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-VT-----TMEE-A---AK--EGGIFVTTTG 412 (718)
Q Consensus 346 L~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v~-----~Lee-l---l~--~aDiIi~atg 412 (718)
-.|++|.|+|. |.||+.+++.++.+|++|+++++++.+...+...|.. +. +..+ + .. ..|+++.+.|
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G 248 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLA 248 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCC
Confidence 36899999998 9999999999999999999998877543333333432 11 2222 2 11 4788888876
Q ss_pred CCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 413 CKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
.. .+ ...++.++++..++.+|..
T Consensus 249 ~~-~~-~~~~~~l~~~G~iv~~g~~ 271 (351)
T 1yb5_A 249 NV-NL-SKDLSLLSHGGRVIVVGSR 271 (351)
T ss_dssp HH-HH-HHHHHHEEEEEEEEECCCC
T ss_pred hH-HH-HHHHHhccCCCEEEEEecC
Confidence 53 22 3567888999999988853
No 391
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=95.13 E-value=0.035 Score=59.12 Aligned_cols=67 Identities=18% Similarity=0.186 Sum_probs=50.6
Q ss_pred cCcEEEEEecChhHHHHHHHHH-h-CCCEEE-EEecCCccHHHH-hhcC--c-eecCHHHHhc--cCcEEEEcCCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLR-L-FGSRVI-VTEIDPINALQA-SMEG--Y-EVTTMEEAAK--EGGIFVTTTGC 413 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~-~-fGa~Vi-v~d~dp~~al~a-~~~G--~-~v~~Leell~--~aDiIi~atgt 413 (718)
.-.+|||||+|.||+..++.+. . -|++++ ++|+++.++... ...| . .+.++++++. +.|+|++++.+
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~ 97 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASN 97 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCG
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCc
Confidence 4468999999999999999887 4 477766 688888764332 2234 2 4568999987 48999998876
No 392
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.11 E-value=0.016 Score=61.77 Aligned_cols=91 Identities=16% Similarity=0.224 Sum_probs=60.4
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCC--EEEEEecCCccHHH---HhhcC------cee-cCHHHHhccCcEEEEcCCC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGS--RVIVTEIDPINALQ---ASMEG------YEV-TTMEEAAKEGGIFVTTTGC 413 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa--~Viv~d~dp~~al~---a~~~G------~~v-~~Leell~~aDiIi~atgt 413 (718)
..+++|+|||.|.||+.+|..+...|. ++.++|+++.+... ...++ ..+ .+..+.++.||+|+++.|.
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 467899999999999999999876666 89999987653210 11111 121 2335789999999987542
Q ss_pred C--------CCc--C-------HHHHhcCCCCeEEEEcCC
Q psy7896 414 K--------DII--R-------GEHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 414 ~--------~lI--~-------~e~l~~MK~gAiLIN~GR 436 (718)
. .++ | .+.+....++++++|++.
T Consensus 87 ~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN 126 (326)
T 3vku_A 87 PQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp C----------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence 1 122 1 123455678889999875
No 393
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=95.11 E-value=0.46 Score=47.55 Aligned_cols=39 Identities=33% Similarity=0.413 Sum_probs=34.0
Q ss_pred ccccCcEEEEEecC-h--hHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 344 IMLAGKVAVVAGYG-D--VGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 344 ~eL~GktVGIIG~G-~--IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.++.||++.|.|.+ . ||+++|+.|...|++|++.++++.
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~ 44 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGER 44 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchH
Confidence 46789999999984 4 999999999999999999987653
No 394
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=95.10 E-value=0.015 Score=60.69 Aligned_cols=84 Identities=11% Similarity=0.109 Sum_probs=55.7
Q ss_pred cEEEEEecChhHHHHHHHHHhC-CCEEE-EEecCCccHHHHhhcCceecCHHHHhc--cCcEEEEcCCCCCCcCHHHHhc
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLF-GSRVI-VTEIDPINALQASMEGYEVTTMEEAAK--EGGIFVTTTGCKDIIRGEHFLQ 424 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~f-Ga~Vi-v~d~dp~~al~a~~~G~~v~~Leell~--~aDiIi~atgt~~lI~~e~l~~ 424 (718)
.+|||||+|++|+..++.++.. +.+++ ++|+++.+..........+.+++++++ ++|+|++++.+.. .-.-....
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~-h~~~~~~a 89 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPGCVIESDWRSVVSAPEVEAVIIATPPAT-HAEITLAA 89 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTTCEEESSTHHHHTCTTCCEEEEESCGGG-HHHHHHHH
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhhCcccCCHHHHhhCCCCCEEEEeCChHH-HHHHHHHH
Confidence 5899999999999999999876 56654 788887543222112112457899985 7999999876531 11222344
Q ss_pred CCCCe-EEEE
Q psy7896 425 MRDDA-IVCN 433 (718)
Q Consensus 425 MK~gA-iLIN 433 (718)
++.|. +++.
T Consensus 90 l~~Gk~v~~e 99 (315)
T 3c1a_A 90 IASGKAVLVE 99 (315)
T ss_dssp HHTTCEEEEE
T ss_pred HHCCCcEEEc
Confidence 56664 5554
No 395
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.09 E-value=0.095 Score=57.50 Aligned_cols=35 Identities=34% Similarity=0.405 Sum_probs=32.4
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
.+++|.|||.|.+|..+|..++.+|.+|++++..+
T Consensus 168 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 202 (464)
T 2eq6_A 168 LPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP 202 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 46999999999999999999999999999998765
No 396
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=95.06 E-value=0.033 Score=58.97 Aligned_cols=82 Identities=16% Similarity=0.064 Sum_probs=54.2
Q ss_pred cEEEEEecChhHHH-HHHHHHhC-CCEEE-EEecCCccHHHHhhcCc-eecCHHHHhcc--CcEEEEcCCCCCCcCHHHH
Q psy7896 349 KVAVVAGYGDVGKG-CAQSLRLF-GSRVI-VTEIDPINALQASMEGY-EVTTMEEAAKE--GGIFVTTTGCKDIIRGEHF 422 (718)
Q Consensus 349 ktVGIIG~G~IG~~-vA~~l~~f-Ga~Vi-v~d~dp~~al~a~~~G~-~v~~Leell~~--aDiIi~atgt~~lI~~e~l 422 (718)
.+|||||+|.||+. .+..++.. +++|. ++|+++.+.. +...+. .+.++++++.. .|+|+++|.+.-- -.-..
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~-~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H-~~~~~ 85 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH-ADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTH-FPLAQ 85 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH-TTCSSCCEESCHHHHHHCSSCCEEEECSCTTTH-HHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH-hhCCCCceECCHHHHhcCCCCCEEEEeCChHHH-HHHHH
Confidence 58999999999997 77777766 77765 6888776543 222233 34689999975 8999998765311 11223
Q ss_pred hcCCCCe-EEE
Q psy7896 423 LQMRDDA-IVC 432 (718)
Q Consensus 423 ~~MK~gA-iLI 432 (718)
..++.|. +++
T Consensus 86 ~al~aGkhV~~ 96 (352)
T 3kux_A 86 SALAAGKHVVV 96 (352)
T ss_dssp HHHHTTCEEEE
T ss_pred HHHHCCCcEEE
Confidence 4455554 444
No 397
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.05 E-value=0.034 Score=58.25 Aligned_cols=93 Identities=14% Similarity=0.155 Sum_probs=66.6
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEE-EEEecCCccHHHHhhcCcee------cCHHHHh------ccCcEEEEcC
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRV-IVTEIDPINALQASMEGYEV------TTMEEAA------KEGGIFVTTT 411 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~V-iv~d~dp~~al~a~~~G~~v------~~Leell------~~aDiIi~at 411 (718)
...|++|.|+|.|.+|...++.++.+|+++ ++++.++.+...+...|... .+..+.. +..|+++.++
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~ 237 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETA 237 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEECS
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcccccccc
Confidence 347899999999999999999999999965 66777776544444455421 1233332 2368888888
Q ss_pred CCCCCcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 412 GCKDIIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 412 gt~~lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
|....++ ..++.++++..++..|...
T Consensus 238 G~~~~~~-~~~~~l~~~G~~v~~g~~~ 263 (346)
T 4a2c_A 238 GVPQTVE-LAVEIAGPHAQLALVGTLH 263 (346)
T ss_dssp CSHHHHH-HHHHHCCTTCEEEECCCCS
T ss_pred cccchhh-hhhheecCCeEEEEEeccC
Confidence 7643333 5678899999999988653
No 398
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=95.05 E-value=0.048 Score=57.32 Aligned_cols=87 Identities=16% Similarity=0.187 Sum_probs=57.8
Q ss_pred cEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHH---HhhcC---------cee-cCHHHHhccCcEEEEcCCCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQ---ASMEG---------YEV-TTMEEAAKEGGIFVTTTGCK 414 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~---a~~~G---------~~v-~~Leell~~aDiIi~atgt~ 414 (718)
++|+|||.|.+|..+|..+...|. +|.++|+++.+... ...++ ... .+. +.++.||+|+.+.+..
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGAP 81 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 589999999999999999988886 89999988753211 11111 122 455 7789999999985432
Q ss_pred ---CC-----------cCH---HHHhcCCCCeEEEEcCC
Q psy7896 415 ---DI-----------IRG---EHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 415 ---~l-----------I~~---e~l~~MK~gAiLIN~GR 436 (718)
+. +-. +.+....+++++++++-
T Consensus 82 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN 120 (309)
T 1ur5_A 82 RKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNN 120 (309)
T ss_dssp -------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCS
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCC
Confidence 11 001 22333457889888754
No 399
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=95.04 E-value=0.027 Score=59.10 Aligned_cols=66 Identities=14% Similarity=0.028 Sum_probs=48.9
Q ss_pred CcEEEEEecChhHHHHHHHHHhC-CCEEE-EEecCCccHHHH-hhcCc--eecCHHHHhc--cCcEEEEcCCC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLF-GSRVI-VTEIDPINALQA-SMEGY--EVTTMEEAAK--EGGIFVTTTGC 413 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~f-Ga~Vi-v~d~dp~~al~a-~~~G~--~v~~Leell~--~aDiIi~atgt 413 (718)
-.+|||||+|.||+..++.++.. +++++ ++|+++.++... ...|. .+.++++++. +.|+|++++.+
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 77 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATIN 77 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCG
T ss_pred ceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCc
Confidence 35899999999999999988765 55655 678887654322 22344 3568999998 78999998776
No 400
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.04 E-value=0.0055 Score=63.54 Aligned_cols=87 Identities=9% Similarity=0.061 Sum_probs=58.3
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCc---ee-cCHHHHh-ccCcEEEEcCCCCCCcCHHHH-
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGY---EV-TTMEEAA-KEGGIFVTTTGCKDIIRGEHF- 422 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~---~v-~~Leell-~~aDiIi~atgt~~lI~~e~l- 422 (718)
++|+|||.|.+|..+|..|..-|.+|+++++++.........|. .+ .+..+.+ +.+|+|++++....+ .+.+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~~~--~~~l~ 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTHQL--DAVIP 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGGGH--HHHGG
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCccCH--HHHHH
Confidence 57999999999999999999889999999887643211112232 11 1233443 789999998766432 2222
Q ss_pred ---hcCCCCeEEEEcCCC
Q psy7896 423 ---LQMRDDAIVCNIGHF 437 (718)
Q Consensus 423 ---~~MK~gAiLIN~GRg 437 (718)
..++++.+++.+.-|
T Consensus 81 ~l~~~l~~~~~iv~~~nG 98 (294)
T 3g17_A 81 HLTYLAHEDTLIILAQNG 98 (294)
T ss_dssp GHHHHEEEEEEEEECCSS
T ss_pred HHHHhhCCCCEEEEeccC
Confidence 234677888887665
No 401
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=95.04 E-value=0.053 Score=57.51 Aligned_cols=89 Identities=18% Similarity=0.272 Sum_probs=60.0
Q ss_pred cEEEEEecChhHHHHHHHHHhCCC--EEEEEecCCccHH------HHh--hc--Ccee--cCHHHHhccCcEEEEcCCCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGS--RVIVTEIDPINAL------QAS--ME--GYEV--TTMEEAAKEGGIFVTTTGCK 414 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa--~Viv~d~dp~~al------~a~--~~--G~~v--~~Leell~~aDiIi~atgt~ 414 (718)
++|+|||.|.||+.+|..+...|. +|.++|+++.+.. +.. .. ...+ .+..+.+++||+|+++.|..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 479999999999999998876665 8999999885421 110 01 1222 24568899999999986532
Q ss_pred ---CC-----c--C-------HHHHhcCCCCeEEEEcCCC
Q psy7896 415 ---DI-----I--R-------GEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 415 ---~l-----I--~-------~e~l~~MK~gAiLIN~GRg 437 (718)
++ + | .+.+....++++++|++..
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNP 120 (314)
T 3nep_X 81 RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANP 120 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSS
T ss_pred CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCc
Confidence 22 1 1 1234556788999998863
No 402
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=95.01 E-value=0.038 Score=60.42 Aligned_cols=67 Identities=22% Similarity=0.218 Sum_probs=48.9
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee---c---CHHHHhccCcEEEEcC
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV---T---TMEEAAKEGGIFVTTT 411 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v---~---~Leell~~aDiIi~at 411 (718)
-+.|++|+|+|.|.+|+.+++.++.+|.+|+++|.+|........+.+.+ . .+.++++.+|+|+.-.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~~~ 104 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVSTEF 104 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEECC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEEcc
Confidence 56899999999999999999999999999999987765432222221111 1 2445667899987533
No 403
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.00 E-value=0.01 Score=55.85 Aligned_cols=33 Identities=24% Similarity=0.241 Sum_probs=30.6
Q ss_pred EEEEEecCCCChhHHHHHHhcCCeEEEeecCch
Q psy7896 271 VAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 303 (718)
Q Consensus 271 ~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~ 303 (718)
.|+|||+|+.|+.+|..|+++|+.|+|+|..+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 489999999999999999999999999998654
No 404
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=95.00 E-value=0.022 Score=59.53 Aligned_cols=84 Identities=7% Similarity=0.024 Sum_probs=54.5
Q ss_pred cEEEEEecChhHH-HHHHHHHhC-CCEEEEEecCCccHHHH-hhcCce--ecCHHHHh-ccCcEEEEcCCCCCCcCHHHH
Q psy7896 349 KVAVVAGYGDVGK-GCAQSLRLF-GSRVIVTEIDPINALQA-SMEGYE--VTTMEEAA-KEGGIFVTTTGCKDIIRGEHF 422 (718)
Q Consensus 349 ktVGIIG~G~IG~-~vA~~l~~f-Ga~Viv~d~dp~~al~a-~~~G~~--v~~Leell-~~aDiIi~atgt~~lI~~e~l 422 (718)
.+|||||+|+||+ ..++.++.. +.+|+++|+++.+.... ...|.. +.+..+++ .+.|+|++++.+.- --.-..
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~-h~~~~~ 81 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDV-HSTLAA 81 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGG-HHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchh-HHHHHH
Confidence 4799999999998 488888765 77877998887654322 223443 34445565 68999999887531 111222
Q ss_pred hcCCCCe-EEEE
Q psy7896 423 LQMRDDA-IVCN 433 (718)
Q Consensus 423 ~~MK~gA-iLIN 433 (718)
..++.|. +++.
T Consensus 82 ~al~~Gk~V~~E 93 (323)
T 1xea_A 82 FFLHLGIPTFVD 93 (323)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHCCCeEEEe
Confidence 4455554 5554
No 405
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=94.99 E-value=0.025 Score=59.94 Aligned_cols=89 Identities=19% Similarity=0.164 Sum_probs=63.0
Q ss_pred cC-cEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCcc----HHHHhhcCce-ecCH--------HHHh--------cc
Q psy7896 347 AG-KVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPIN----ALQASMEGYE-VTTM--------EEAA--------KE 403 (718)
Q Consensus 347 ~G-ktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~----al~a~~~G~~-v~~L--------eell--------~~ 403 (718)
.| ++|.|+|. |.||..+++.++.+|++|+++..++.+ ...+...|.. +.+. .+.+ ..
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g 245 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE 245 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCC
Confidence 57 99999998 999999999999999998887654432 1122233532 2221 1122 24
Q ss_pred CcEEEEcCCCCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 404 GGIFVTTTGCKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 404 aDiIi~atgt~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
.|+++-++|..... ..++.++++..++.+|..
T Consensus 246 ~Dvvid~~G~~~~~--~~~~~l~~~G~~v~~g~~ 277 (364)
T 1gu7_A 246 AKLALNCVGGKSST--GIARKLNNNGLMLTYGGM 277 (364)
T ss_dssp EEEEEESSCHHHHH--HHHHTSCTTCEEEECCCC
T ss_pred ceEEEECCCchhHH--HHHHHhccCCEEEEecCC
Confidence 79999998865443 568899999999999863
No 406
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=94.98 E-value=0.033 Score=58.72 Aligned_cols=65 Identities=15% Similarity=0.144 Sum_probs=49.2
Q ss_pred cEEEEEecChhHHHHHHHHH-h-CCCEEE-EEecCCccHHHH-hhcC--c-eecCHHHHhcc--CcEEEEcCCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLR-L-FGSRVI-VTEIDPINALQA-SMEG--Y-EVTTMEEAAKE--GGIFVTTTGC 413 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~-~-fGa~Vi-v~d~dp~~al~a-~~~G--~-~v~~Leell~~--aDiIi~atgt 413 (718)
.+|||||+|.||+..++.++ . -+++++ ++|+++.+.... ...| . .+.++++++++ .|+|++++.+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~ 76 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWG 76 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCG
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCc
Confidence 47999999999999999888 5 477766 688887654332 2334 2 35689999976 8999998765
No 407
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=94.96 E-value=0.031 Score=59.19 Aligned_cols=88 Identities=16% Similarity=0.185 Sum_probs=57.8
Q ss_pred cEEEEEecChhHHHHHHHHHhCCC--EEEEEecCCccHHH-H--hhcC------cee-cCHHHHhccCcEEEEcCCCC--
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGS--RVIVTEIDPINALQ-A--SMEG------YEV-TTMEEAAKEGGIFVTTTGCK-- 414 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa--~Viv~d~dp~~al~-a--~~~G------~~v-~~Leell~~aDiIi~atgt~-- 414 (718)
.+|+|||.|.||..++..+...+. ++.++|+++.+... + ..++ ..+ .+..+.++.||||+++.+..
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~~ 85 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQK 85 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC---
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 689999999999999998876555 89999998754321 1 1111 111 23467799999999975532
Q ss_pred -CC-------cC-------HHHHhcCCCCeEEEEcCC
Q psy7896 415 -DI-------IR-------GEHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 415 -~l-------I~-------~e~l~~MK~gAiLIN~GR 436 (718)
++ .| .+.+....++++++|++-
T Consensus 86 ~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 122 (318)
T 1ez4_A 86 PGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN 122 (318)
T ss_dssp -------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 11 11 123444578999999744
No 408
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=94.95 E-value=0.049 Score=60.11 Aligned_cols=35 Identities=23% Similarity=0.085 Sum_probs=31.2
Q ss_pred CcEEEEEecCCCChhHHHHHHh-c------CCeEEEeecCch
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRL-F------GSRVIVTEIDPI 303 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra-~------Gv~VtV~D~dp~ 303 (718)
.++|+|||.|+.|..+|..|++ . |+.|+++|..+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 3689999999999999999998 7 999999997753
No 409
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=94.95 E-value=0.066 Score=56.60 Aligned_cols=89 Identities=13% Similarity=0.229 Sum_probs=56.5
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCC--EEEEEecCCccHH---HHhhcCc------eec-CHHHHhccCcEEEEcCCCC-
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGS--RVIVTEIDPINAL---QASMEGY------EVT-TMEEAAKEGGIFVTTTGCK- 414 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa--~Viv~d~dp~~al---~a~~~G~------~v~-~Leell~~aDiIi~atgt~- 414 (718)
..+|+|||.|.||..++..+...|. +|.++|+++.+.. ....++. .+. +-.+.++.||+|+++.++.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p~ 86 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR 86 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 4689999999999999999987777 9999999874321 1112221 121 2256789999999986642
Q ss_pred --CC-------cC----H---HHHhcCCCCeEEEEcCC
Q psy7896 415 --DI-------IR----G---EHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 415 --~l-------I~----~---e~l~~MK~gAiLIN~GR 436 (718)
++ .| . +.+....++++++|++-
T Consensus 87 k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 124 (318)
T 1y6j_A 87 KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSN 124 (318)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSS
T ss_pred CCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 21 00 1 12333368999999744
No 410
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=94.95 E-value=0.025 Score=59.42 Aligned_cols=100 Identities=11% Similarity=0.137 Sum_probs=66.0
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec--------CHHHH-hccCcEEEEcCCCC--CC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT--------TMEEA-AKEGGIFVTTTGCK--DI 416 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~--------~Leel-l~~aDiIi~atgt~--~l 416 (718)
.+++.|+|+|++|+.+++.|...|. |+++|.||.... ....|+.+. .++++ ++++|.++.++++. ++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~n~ 192 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETI 192 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHHHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHHHH
Confidence 5689999999999999999999999 999999987544 334555432 23444 67889988887642 33
Q ss_pred cCHHHHhcCCCCeEEEEcCCCCccccHHHHhcccc
Q psy7896 417 IRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDKNAV 451 (718)
Q Consensus 417 I~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l 451 (718)
........+.+...++--.+. +-..+.|...+.
T Consensus 193 ~~~~~ar~~~~~~~iiar~~~--~~~~~~l~~~G~ 225 (336)
T 1lnq_A 193 HCILGIRKIDESVRIIAEAER--YENIEQLRMAGA 225 (336)
T ss_dssp HHHHHHHTTCTTSEEEEECSS--GGGHHHHHHTTC
T ss_pred HHHHHHHHHCCCCeEEEEECC--HHHHHHHHHcCC
Confidence 444556677776555443332 233345554443
No 411
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=94.94 E-value=0.034 Score=59.06 Aligned_cols=68 Identities=13% Similarity=-0.043 Sum_probs=50.8
Q ss_pred cCcEEEEEecChhHH-HHHHHHHhC-CCEEE-EEecCCccHHHH-hhcCce-ecCHHHHhc--cCcEEEEcCCCC
Q psy7896 347 AGKVAVVAGYGDVGK-GCAQSLRLF-GSRVI-VTEIDPINALQA-SMEGYE-VTTMEEAAK--EGGIFVTTTGCK 414 (718)
Q Consensus 347 ~GktVGIIG~G~IG~-~vA~~l~~f-Ga~Vi-v~d~dp~~al~a-~~~G~~-v~~Leell~--~aDiIi~atgt~ 414 (718)
+-.+|||||+|.||+ ..++.++.. |++|+ ++|+++.++... ...|.. +.++++++. +.|+|++++.+.
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~ 100 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAV 100 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGG
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcH
Confidence 447899999999998 788888877 77876 688887654332 223543 468999996 589999987763
No 412
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=94.92 E-value=0.043 Score=52.02 Aligned_cols=66 Identities=15% Similarity=0.102 Sum_probs=45.8
Q ss_pred CcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee--------cCHHHHhccCcEEEEcCCC
Q psy7896 348 GKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV--------TTMEEAAKEGGIFVTTTGC 413 (718)
Q Consensus 348 GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v--------~~Leell~~aDiIi~atgt 413 (718)
+++|.|.|. |.||+.+++.|...|.+|++.++++.........++.+ .++.++++.+|+|+.+.+.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~ 77 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT 77 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccC
Confidence 489999998 99999999999999999999988764321110122221 1244566777877766543
No 413
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.88 E-value=0.027 Score=60.05 Aligned_cols=89 Identities=19% Similarity=0.155 Sum_probs=65.1
Q ss_pred cCcEEEEEe-cChhHHHHHHHHHh-CCCEEEEEecCCccHHHHhhcCcee-c----CHHHHhc-----cCcEEEEcCCCC
Q psy7896 347 AGKVAVVAG-YGDVGKGCAQSLRL-FGSRVIVTEIDPINALQASMEGYEV-T----TMEEAAK-----EGGIFVTTTGCK 414 (718)
Q Consensus 347 ~GktVGIIG-~G~IG~~vA~~l~~-fGa~Viv~d~dp~~al~a~~~G~~v-~----~Leell~-----~aDiIi~atgt~ 414 (718)
.|++|.|+| .|.||..+++.++. .|++|++++.++.+...+...|... . ++.+.++ ..|+++.++|..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g~~ 250 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTD 250 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCCch
Confidence 689999999 99999999999998 5999999988776543344445431 1 2333332 478888888764
Q ss_pred CCcCHHHHhcCCCCeEEEEcCC
Q psy7896 415 DIIRGEHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 415 ~lI~~e~l~~MK~gAiLIN~GR 436 (718)
..+ ...++.++++..++.+|.
T Consensus 251 ~~~-~~~~~~l~~~G~iv~~g~ 271 (363)
T 4dvj_A 251 KHA-AEIADLIAPQGRFCLIDD 271 (363)
T ss_dssp HHH-HHHHHHSCTTCEEEECSC
T ss_pred hhH-HHHHHHhcCCCEEEEECC
Confidence 333 356788999999998864
No 414
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=94.85 E-value=0.058 Score=57.59 Aligned_cols=76 Identities=21% Similarity=0.214 Sum_probs=52.6
Q ss_pred CccceEEEecCCcccccccccccchhhHHHHHh---------------hhcccccCCcEEEEEecCCCChhHHHHHHhcC
Q psy7896 228 KLGVPAINVNDSVTKSKFDNLYGCRESLVDGLK---------------RATDIMLAGKVAVVAGYGDVGKGCAQSLRLFG 292 (718)
Q Consensus 228 ~l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i~---------------r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~G 292 (718)
+.+++|.|+.+.......|...+.-=++.+.+. ...+..+.|+++.|+|+|.+|+.+|+.++.+|
T Consensus 85 ~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~va~~~~~fg 164 (334)
T 3kb6_A 85 KKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAFG 164 (334)
T ss_dssp HHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHTT
T ss_pred HCCCEEEECCCcCcHHHHHHHHHHHHHHhhccccccccccccccccccccccceecCcEEEEECcchHHHHHHHhhcccC
Confidence 346788888877776666655442111111110 11124578999999999999999999999999
Q ss_pred CeEEEeecCch
Q psy7896 293 SRVIVTEIDPI 303 (718)
Q Consensus 293 v~VtV~D~dp~ 303 (718)
.+|..+|..+.
T Consensus 165 ~~v~~~d~~~~ 175 (334)
T 3kb6_A 165 MKVLCYDVVKR 175 (334)
T ss_dssp CEEEEECSSCC
T ss_pred ceeeecCCccc
Confidence 99999885443
No 415
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=94.85 E-value=0.042 Score=59.05 Aligned_cols=39 Identities=18% Similarity=0.315 Sum_probs=35.8
Q ss_pred ccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchh
Q psy7896 266 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPIN 304 (718)
Q Consensus 266 ~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r 304 (718)
.+.|+++.|+|+|.+|..+|+.|+++|.+|+++|..+..
T Consensus 145 ~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~ 183 (343)
T 2yq5_A 145 EIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNP 183 (343)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCG
T ss_pred ccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhh
Confidence 478999999999999999999999999999999987653
No 416
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.84 E-value=0.045 Score=60.87 Aligned_cols=66 Identities=26% Similarity=0.296 Sum_probs=50.2
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHH-------------------HHhhcC-ce-ecCHHHHhccCcE
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINAL-------------------QASMEG-YE-VTTMEEAAKEGGI 406 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al-------------------~a~~~G-~~-v~~Leell~~aDi 406 (718)
=++|+|||+|-||..+|..+...|.+|+++|+|+.+-. +....| .. ..+.+++++.+|+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad~ 100 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATDA 100 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSSE
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCCc
Confidence 36899999999999999999999999999999875411 011222 22 2467888999999
Q ss_pred EEEcCCC
Q psy7896 407 FVTTTGC 413 (718)
Q Consensus 407 Ii~atgt 413 (718)
++++-+|
T Consensus 101 ~~I~VpT 107 (444)
T 3vtf_A 101 TFIAVGT 107 (444)
T ss_dssp EEECCCC
T ss_pred eEEEecC
Confidence 9987444
No 417
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=94.82 E-value=0.042 Score=63.41 Aligned_cols=109 Identities=22% Similarity=0.156 Sum_probs=67.5
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhhh----hhhhhhhhHHH---HHHHHHHhccccccc------
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQA----SMEGYELDEEV---AALHLEHLGVKLTKL------ 334 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~A----vaeGf~L~r~i---~~~~l~~lgv~~~~~------ 334 (718)
..++++|||.|+.|..+|..|+++|.+|+++|..+...-+. ...+.....+. ....+...++++...
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~~ 451 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTAD 451 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecHH
Confidence 46799999999999999999999999999999865331111 11111110110 111222333332100
Q ss_pred --------------chhhh--------------hh-hcccccCcEEEEEecChhHHHHHHHHHhCCCEEEE
Q psy7896 335 --------------TEDQA--------------KY-LDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIV 376 (718)
Q Consensus 335 --------------~~~~~--------------~~-~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv 376 (718)
.+... .. ......+++|.|||.|.+|..+|..|..+|.+|++
T Consensus 452 ~~~~~d~lviAtG~~p~~~~i~G~~~~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 452 QLQAFDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp SSCCSSEEEECCCEEECCCCCBTTTSTTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred HhhcCCEEEEccCCCcCCCCCCCCCCCcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 00000 00 01234689999999999999999999999987653
No 418
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=94.82 E-value=0.11 Score=54.65 Aligned_cols=132 Identities=14% Similarity=0.068 Sum_probs=85.8
Q ss_pred cchhhHHHHHhhhcccccCCcEEEEEe-cCCCChhHHH-HHHhcCCeEEE-eecCchhhhhhhhhhhhhhHHHHHHHHHH
Q psy7896 250 GCRESLVDGLKRATDIMLAGKVAVVAG-YGDVGKGCAQ-SLRLFGSRVIV-TEIDPINALQASMEGYELDEEVAALHLEH 326 (718)
Q Consensus 250 G~~es~~~~i~r~t~~~~~Gk~vvViG-yG~vG~~~A~-aLra~Gv~VtV-~D~dp~r~v~AvaeGf~L~r~i~~~~l~~ 326 (718)
|-+||+.|...--. .-+-.+.|+. +..--. .. .++-.+++|++ -+.+...=.|+.++-|.+-+
T Consensus 74 ~kgEsl~DTarvls---~~~~D~iviR~~~~~~~--~~~la~~~~vPVINAG~g~~~HPtQaLaDl~Ti~e--------- 139 (291)
T 3d6n_B 74 VKGESFFDTLKTFE---GLGFDYVVFRVPFVFFP--YKEIVKSLNLRLVNAGDGTHQHPSQGLIDFFTIKE--------- 139 (291)
T ss_dssp CTTCCHHHHHHHHH---HTTCSEEEEEESSCCCS--CHHHHHTCSSEEEEEEETTTBCHHHHHHHHHHHHH---------
T ss_pred cCCCcHHHHHHHHH---HhcCCEEEEEcCChHHH--HHHHHHhCCCCEEeCccCCCcCcHHHHHHHHHHHH---------
Confidence 56788877655311 1221233343 322222 22 34556789998 67777777788777766532
Q ss_pred hcccccccchhhhhhhcccccCcEEEEEec---ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-ecCHHHHhc
Q psy7896 327 LGVKLTKLTEDQAKYLDIMLAGKVAVVAGY---GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-VTTMEEAAK 402 (718)
Q Consensus 327 lgv~~~~~~~~~~~~~g~eL~GktVGIIG~---G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v~~Leell~ 402 (718)
..| .+.|++|++||- +++.+..+..+..||++|.++-+...........|+. ..+++|+++
T Consensus 140 --------------~~g-~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav~ 204 (291)
T 3d6n_B 140 --------------HFG-EVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGID 204 (291)
T ss_dssp --------------HHS-CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHHH
T ss_pred --------------HhC-CcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHhC
Confidence 112 588999999997 8999999999999999999985422211111123554 467999999
Q ss_pred cCcEEEEc
Q psy7896 403 EGGIFVTT 410 (718)
Q Consensus 403 ~aDiIi~a 410 (718)
++|+|.++
T Consensus 205 ~aDvvy~~ 212 (291)
T 3d6n_B 205 WADVVIWL 212 (291)
T ss_dssp HCSEEEEC
T ss_pred CCCEEEEe
Confidence 99999983
No 419
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=94.80 E-value=0.028 Score=58.27 Aligned_cols=65 Identities=17% Similarity=0.297 Sum_probs=47.0
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHHHh-hcCceec-CHHHHhccCcEEEEcCCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQAS-MEGYEVT-TMEEAAKEGGIFVTTTGC 413 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~a~-~~G~~v~-~Leell~~aDiIi~atgt 413 (718)
.++++.|+|.|..|+.++..|...|+ +|+++++++.++.+.. ..+..+. ++. +.++|+||.+|..
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~ 185 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSI 185 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCC
Confidence 57899999999999999999999998 7999998876543211 1132322 222 4578888887654
No 420
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=94.80 E-value=0.045 Score=62.06 Aligned_cols=35 Identities=23% Similarity=0.244 Sum_probs=31.5
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
-+++.|||.|.||..+|..+++||.+|++..+++.
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~ 257 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIV 257 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCS
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEeccccc
Confidence 38899999999999999999999999999876543
No 421
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=94.79 E-value=0.017 Score=63.66 Aligned_cols=90 Identities=18% Similarity=0.189 Sum_probs=64.1
Q ss_pred ccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-c---C-----------------------H
Q psy7896 346 LAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-T---T-----------------------M 397 (718)
Q Consensus 346 L~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~---~-----------------------L 397 (718)
-.|++|.|+|. |.||...++.++.+|++|++++.++.+...+...|... . + +
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i 306 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRI 306 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHH
Confidence 46899999998 99999999999999999999887665543333344321 1 0 1
Q ss_pred HHHh--ccCcEEEEcCCCCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 398 EEAA--KEGGIFVTTTGCKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 398 eell--~~aDiIi~atgt~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
.++. +..|+++-++|.. . -...+..++++..++.+|..
T Consensus 307 ~~~t~g~g~Dvvid~~G~~-~-~~~~~~~l~~~G~iv~~G~~ 346 (456)
T 3krt_A 307 RELTGGEDIDIVFEHPGRE-T-FGASVFVTRKGGTITTCAST 346 (456)
T ss_dssp HHHHTSCCEEEEEECSCHH-H-HHHHHHHEEEEEEEEESCCT
T ss_pred HHHhCCCCCcEEEEcCCch-h-HHHHHHHhhCCcEEEEEecC
Confidence 1122 2578888887762 2 23567888999999998753
No 422
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.78 E-value=0.036 Score=58.51 Aligned_cols=90 Identities=19% Similarity=0.146 Sum_probs=64.7
Q ss_pred ccCcEEEEEe-cChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec----CHHHHh------ccCcEEEEcCCCC
Q psy7896 346 LAGKVAVVAG-YGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT----TMEEAA------KEGGIFVTTTGCK 414 (718)
Q Consensus 346 L~GktVGIIG-~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~----~Leell------~~aDiIi~atgt~ 414 (718)
-.|++|.|+| .|.||..+++.++.+|++|+++ .++.+...+...|.... ++.+.+ +..|+++.++|..
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~~~~~~~~~~~~~~~~~g~D~vid~~g~~ 227 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGGP 227 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEETTSCHHHHHHHHHTTSCEEEEEESSCTH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEeccCCCHHHHHHHHhcCCCceEEEECCCcH
Confidence 3689999999 7999999999999999999998 66554333333344321 233322 2579999888752
Q ss_pred CCcCHHHHhcCCCCeEEEEcCCCC
Q psy7896 415 DIIRGEHFLQMRDDAIVCNIGHFD 438 (718)
Q Consensus 415 ~lI~~e~l~~MK~gAiLIN~GRgd 438 (718)
.-...++.|+++..++.+|...
T Consensus 228 --~~~~~~~~l~~~G~iv~~g~~~ 249 (343)
T 3gaz_A 228 --VLDASFSAVKRFGHVVSCLGWG 249 (343)
T ss_dssp --HHHHHHHHEEEEEEEEESCCCS
T ss_pred --HHHHHHHHHhcCCeEEEEcccC
Confidence 2345678899999999988654
No 423
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=94.75 E-value=0.027 Score=59.00 Aligned_cols=80 Identities=15% Similarity=0.271 Sum_probs=49.7
Q ss_pred cEEEEEecChhHHHHHHHHHh-CCCEEE-EEecCCccHHHHhhcCce---ecCHHHHhccCcEEEEcCCCCCCcCHHHHh
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRL-FGSRVI-VTEIDPINALQASMEGYE---VTTMEEAAKEGGIFVTTTGCKDIIRGEHFL 423 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~-fGa~Vi-v~d~dp~~al~a~~~G~~---v~~Leell~~aDiIi~atgt~~lI~~e~l~ 423 (718)
.+|||||+|+||+.+++.++. -++++. ++|++|.+... .|.. +.++.+. .+.|+|+.++++..- -+-...
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~---~g~~~~~~~~l~~~-~~~DvViiatp~~~h-~~~~~~ 84 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF---ELQPFRVVSDIEQL-ESVDVALVCSPSREV-ERTALE 84 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------CCTTSCEESSGGGS-SSCCEEEECSCHHHH-HHHHHH
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH---cCCCcCCHHHHHhC-CCCCEEEECCCchhh-HHHHHH
Confidence 589999999999999999876 467877 68888765422 3433 3344444 689999999875311 112234
Q ss_pred cCCCCeEEEE
Q psy7896 424 QMRDDAIVCN 433 (718)
Q Consensus 424 ~MK~gAiLIN 433 (718)
.++.|.-++.
T Consensus 85 al~aG~~Vi~ 94 (304)
T 3bio_A 85 ILKKGICTAD 94 (304)
T ss_dssp HHTTTCEEEE
T ss_pred HHHcCCeEEE
Confidence 5566665554
No 424
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.73 E-value=0.097 Score=58.08 Aligned_cols=103 Identities=16% Similarity=0.138 Sum_probs=71.5
Q ss_pred hcccccCcEEEEEecC----------hhHHHHHHHHHhCCCEEEEEecCCccHHHHh--hcCcee-cCHHHHhccCcEEE
Q psy7896 342 LDIMLAGKVAVVAGYG----------DVGKGCAQSLRLFGSRVIVTEIDPINALQAS--MEGYEV-TTMEEAAKEGGIFV 408 (718)
Q Consensus 342 ~g~eL~GktVGIIG~G----------~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~--~~G~~v-~~Leell~~aDiIi 408 (718)
++..+.|++|+|+|+- .-...+++.|...|++|.+|| |....++. ..+..+ .+++++++.+|.++
T Consensus 316 l~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~D--P~~~~~~~~~~~~~~~~~~~~~~~~~ad~vv 393 (446)
T 4a7p_A 316 MGGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYD--PEGVEQASKMLTDVEFVENPYAAADGADALV 393 (446)
T ss_dssp TTSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEEC--SSCHHHHGGGCSSCCBCSCHHHHHTTBSEEE
T ss_pred hcccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEEC--CCCCHhHHHhcCCceEecChhHHhcCCCEEE
Confidence 3567899999999987 458999999999999999995 44322221 124443 47889999999999
Q ss_pred EcCCCCCC--cCHHHHh-cCCCCeEEEEcCCCCccccHHHHhccc
Q psy7896 409 TTTGCKDI--IRGEHFL-QMRDDAIVCNIGHFDCEIQVSWLDKNA 450 (718)
Q Consensus 409 ~atgt~~l--I~~e~l~-~MK~gAiLIN~GRgd~Eid~~aL~~~~ 450 (718)
++|..... ++-+.+. .|+. .++++ +|. -.+.+.+++.+
T Consensus 394 i~t~~~~f~~~d~~~~~~~~~~-~~i~D-~r~--~~~~~~~~~~g 434 (446)
T 4a7p_A 394 IVTEWDAFRALDLTRIKNSLKS-PVLVD-LRN--IYPPAELERAG 434 (446)
T ss_dssp ECSCCTTTTSCCHHHHHTTBSS-CBEEC-SSC--CSCHHHHHHTT
T ss_pred EeeCCHHhhcCCHHHHHHhcCC-CEEEE-CCC--CCCHHHHHhcC
Confidence 98876543 5666664 4554 56776 442 35555555543
No 425
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=94.72 E-value=0.061 Score=56.00 Aligned_cols=84 Identities=8% Similarity=-0.028 Sum_probs=55.6
Q ss_pred cEEEEEecChhHHH-HHHHHHhC-CCEEE-EEecCCccHHHH-hhcCce-ecCHHHHhccCcEEEEcCCCCCCcCHHHHh
Q psy7896 349 KVAVVAGYGDVGKG-CAQSLRLF-GSRVI-VTEIDPINALQA-SMEGYE-VTTMEEAAKEGGIFVTTTGCKDIIRGEHFL 423 (718)
Q Consensus 349 ktVGIIG~G~IG~~-vA~~l~~f-Ga~Vi-v~d~dp~~al~a-~~~G~~-v~~Leell~~aDiIi~atgt~~lI~~e~l~ 423 (718)
.+|||||+|.||+. +++.+... |++++ ++|+++.+.... ...|.. +.+.+++..+.|+|++++.+. .--.-...
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~-~h~~~~~~ 84 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTA-SHFDVVST 84 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTT-HHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCch-hHHHHHHH
Confidence 58999999999996 88877654 67766 788888654332 222443 346777767899999988763 11122234
Q ss_pred cCCCCe-EEEE
Q psy7896 424 QMRDDA-IVCN 433 (718)
Q Consensus 424 ~MK~gA-iLIN 433 (718)
.++.|. +++.
T Consensus 85 al~~G~~v~~e 95 (319)
T 1tlt_A 85 LLNAGVHVCVD 95 (319)
T ss_dssp HHHTTCEEEEE
T ss_pred HHHcCCeEEEe
Confidence 456665 5554
No 426
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=94.70 E-value=0.038 Score=58.85 Aligned_cols=64 Identities=17% Similarity=0.199 Sum_probs=47.0
Q ss_pred cEEEEEecChhHHH-HHHHHHhC-CCEEE-EEecCCccHHHHhhcCce-ecCHHHHhc--cCcEEEEcCCC
Q psy7896 349 KVAVVAGYGDVGKG-CAQSLRLF-GSRVI-VTEIDPINALQASMEGYE-VTTMEEAAK--EGGIFVTTTGC 413 (718)
Q Consensus 349 ktVGIIG~G~IG~~-vA~~l~~f-Ga~Vi-v~d~dp~~al~a~~~G~~-v~~Leell~--~aDiIi~atgt 413 (718)
.+|||||+|.||+. .+..++.. +++|. ++|+++.+..+ ...+.. +.++++++. +.|+|+++|.+
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 75 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKR-DFPDAEVVHELEEITNDPAIELVIVTTPS 75 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHH-HCTTSEEESSTHHHHTCTTCCEEEECSCT
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh-hCCCCceECCHHHHhcCCCCCEEEEcCCc
Confidence 58999999999997 67777766 77765 57887754222 222333 568999997 68999998876
No 427
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=94.68 E-value=0.024 Score=57.97 Aligned_cols=37 Identities=22% Similarity=0.328 Sum_probs=33.8
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCC
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDP 381 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp 381 (718)
.|++++|.|||.|.+|..+++.|...|. +++++|.|.
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4789999999999999999999999998 788988775
No 428
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=94.66 E-value=0.041 Score=58.66 Aligned_cols=66 Identities=12% Similarity=-0.001 Sum_probs=48.9
Q ss_pred CcEEEEEecChhHHH-HHHHHHhC-CCEEE-EEecCCccHHHHhhc--Cc-eecCHHHHhcc--CcEEEEcCCC
Q psy7896 348 GKVAVVAGYGDVGKG-CAQSLRLF-GSRVI-VTEIDPINALQASME--GY-EVTTMEEAAKE--GGIFVTTTGC 413 (718)
Q Consensus 348 GktVGIIG~G~IG~~-vA~~l~~f-Ga~Vi-v~d~dp~~al~a~~~--G~-~v~~Leell~~--aDiIi~atgt 413 (718)
-.+|||||+|.||+. .++.++.. +++++ ++|+++.++...... +. .+.++++++.+ .|+|++++.+
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 78 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPP 78 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCc
Confidence 468999999999995 78888776 77876 788888654332221 22 35689999975 4999998765
No 429
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=94.66 E-value=0.037 Score=58.87 Aligned_cols=90 Identities=17% Similarity=0.179 Sum_probs=58.5
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCC--EEEEEecCCccHHH-H--hhcC------cee-cCHHHHhccCcEEEEcCCCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGS--RVIVTEIDPINALQ-A--SMEG------YEV-TTMEEAAKEGGIFVTTTGCK 414 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa--~Viv~d~dp~~al~-a--~~~G------~~v-~~Leell~~aDiIi~atgt~ 414 (718)
..++|+|||.|.||..++..+...+. ++.++|+++.+... + ..++ ..+ .+..+.++.||+|+++.+..
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~ 87 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 34789999999999999998865554 89999998754311 1 1222 111 23467799999999986532
Q ss_pred ---CC-------cCH-------HHHhcCCCCeEEEEcCC
Q psy7896 415 ---DI-------IRG-------EHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 415 ---~l-------I~~-------e~l~~MK~gAiLIN~GR 436 (718)
++ .|. +.+.+..++++++|++-
T Consensus 88 ~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 126 (326)
T 2zqz_A 88 QKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 21 111 22333468999999744
No 430
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=94.65 E-value=0.042 Score=58.83 Aligned_cols=90 Identities=13% Similarity=0.109 Sum_probs=60.4
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCC--EEEEEecCCccHHH-H--hhcC------ce---ecCHHHHhccCcEEEEcCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGS--RVIVTEIDPINALQ-A--SMEG------YE---VTTMEEAAKEGGIFVTTTG 412 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa--~Viv~d~dp~~al~-a--~~~G------~~---v~~Leell~~aDiIi~atg 412 (718)
..++|+|||.|.||..+|..+...|. +|.++|+++.+... + ..++ .. ..+.++ +++||+|+++.|
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 56899999999999999999977776 89999987643211 0 0111 11 224555 899999998754
Q ss_pred CC---C-----CcC---------HHHHhcCCCCeEEEEcCCC
Q psy7896 413 CK---D-----IIR---------GEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~---~-----lI~---------~e~l~~MK~gAiLIN~GRg 437 (718)
.. + ++. .+.+....++++++|++-.
T Consensus 99 ~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNP 140 (330)
T 3ldh_A 99 ARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPEL 140 (330)
T ss_dssp CCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCc
Confidence 31 2 111 1234455889999998863
No 431
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.63 E-value=0.071 Score=56.19 Aligned_cols=65 Identities=17% Similarity=0.090 Sum_probs=47.1
Q ss_pred CcEEEEEecChhHHH-HHHHHHhCCCEEEEEecCCccH-H-HHhhcCceec---CHHHHh-ccCcEEEEcCC
Q psy7896 348 GKVAVVAGYGDVGKG-CAQSLRLFGSRVIVTEIDPINA-L-QASMEGYEVT---TMEEAA-KEGGIFVTTTG 412 (718)
Q Consensus 348 GktVGIIG~G~IG~~-vA~~l~~fGa~Viv~d~dp~~a-l-~a~~~G~~v~---~Leell-~~aDiIi~atg 412 (718)
.|+|.|||.|.+|+. +|+.|+..|++|+++|..+... . +....|..+. +.+++. .++|+||..++
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spg 75 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNV 75 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTT
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCC
Confidence 578999999999995 9999999999999999765321 1 1123465543 334444 47899998654
No 432
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.60 E-value=0.083 Score=58.54 Aligned_cols=36 Identities=22% Similarity=0.239 Sum_probs=32.7
Q ss_pred cCcEEEEEecChhHHHHHHHHHhC---CCEEEEEecCCc
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLF---GSRVIVTEIDPI 382 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~f---Ga~Viv~d~dp~ 382 (718)
.++++.|||.|.||..+|..++.+ |.+|+++++.+.
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~ 224 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDM 224 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCC
Confidence 368999999999999999999999 999999987653
No 433
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=94.52 E-value=0.037 Score=57.65 Aligned_cols=88 Identities=19% Similarity=0.148 Sum_probs=61.3
Q ss_pred Cc-EEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-e---cCH-HHHh-----ccCcEEEEcCCCCC
Q psy7896 348 GK-VAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-V---TTM-EEAA-----KEGGIFVTTTGCKD 415 (718)
Q Consensus 348 Gk-tVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v---~~L-eell-----~~aDiIi~atgt~~ 415 (718)
|+ +|.|+|. |.||..+++.++.+|++|++++.++.+...+...|.. + .+. .+.+ ...|+++.++|..
T Consensus 149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~~- 227 (328)
T 1xa0_A 149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGR- 227 (328)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTTT-
T ss_pred CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcHH-
Confidence 54 8999998 9999999999999999999998876654333334532 1 111 1111 1368888887763
Q ss_pred CcCHHHHhcCCCCeEEEEcCCC
Q psy7896 416 IIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 416 lI~~e~l~~MK~gAiLIN~GRg 437 (718)
. -...++.++++..++.+|..
T Consensus 228 ~-~~~~~~~l~~~G~~v~~G~~ 248 (328)
T 1xa0_A 228 T-LATVLSRMRYGGAVAVSGLT 248 (328)
T ss_dssp T-HHHHHHTEEEEEEEEECSCC
T ss_pred H-HHHHHHhhccCCEEEEEeec
Confidence 2 34667888999999988764
No 434
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=94.47 E-value=0.08 Score=54.62 Aligned_cols=39 Identities=23% Similarity=0.416 Sum_probs=35.2
Q ss_pred ccccCcEEEEEecC---hhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 344 IMLAGKVAVVAGYG---DVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 344 ~eL~GktVGIIG~G---~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
..+.||++.|.|.+ .||+++|+.|...|++|++.++++.
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~ 67 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSET 67 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChH
Confidence 46899999999986 8999999999999999999988753
No 435
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.43 E-value=0.038 Score=50.76 Aligned_cols=39 Identities=23% Similarity=0.285 Sum_probs=35.1
Q ss_pred CcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhhhh
Q psy7896 269 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQ 307 (718)
Q Consensus 269 Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~v~ 307 (718)
.++++|+|+|.+|..+++.|++.|+.|+++|.++.+...
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~ 45 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDE 45 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHH
Confidence 468999999999999999999999999999999987533
No 436
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=94.42 E-value=0.5 Score=50.79 Aligned_cols=84 Identities=13% Similarity=0.103 Sum_probs=60.9
Q ss_pred HHHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHHhccCcEEEEcCCCCCCcCHHHHhcCCCCeEEEEcCCCCccc
Q psy7896 362 GCAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEAAKEGGIFVTTTGCKDIIRGEHFLQMRDDAIVCNIGHFDCEI 441 (718)
Q Consensus 362 ~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leell~~aDiIi~atgt~~lI~~e~l~~MK~gAiLIN~GRgd~Ei 441 (718)
.+.+.++..|.+|++++..... ...+.+.++++|++++......-++++.++++++=-++...|-|-+-+
T Consensus 31 ~~~~~L~~~g~ev~~~~~~~~~----------~~~~~~~~~~ad~li~~~~~~~~~~~~~l~~~p~Lk~i~~~g~G~d~i 100 (351)
T 3jtm_A 31 GIRDWLESQGHQYIVTDDKEGP----------DCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSDHI 100 (351)
T ss_dssp GCHHHHHHTTCEEEEESCCSST----------TSHHHHHTTTCSEEEECTTSCCCBCHHHHHHCSSCCEEEESSSCCTTB
T ss_pred HHHHHHHHCCCEEEEeCCCCCC----------HHHHHHHhCCCEEEEEccCCCCCCCHHHHhhCCCCeEEEEeCeeeccc
Confidence 3457889999999987532211 013667788999998765444568999999998878888888886679
Q ss_pred cHHHHhccccceee
Q psy7896 442 QVSWLDKNAVEKVN 455 (718)
Q Consensus 442 d~~aL~~~~l~~~~ 455 (718)
|+++..+.++.+..
T Consensus 101 d~~~a~~~gI~V~n 114 (351)
T 3jtm_A 101 DLQAAAAAGLTVAE 114 (351)
T ss_dssp CHHHHHHTTCEEEE
T ss_pred CHHHHHhcCeeEEE
Confidence 99888776654443
No 437
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.40 E-value=0.022 Score=59.27 Aligned_cols=87 Identities=22% Similarity=0.199 Sum_probs=62.1
Q ss_pred CcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-ecCHHH------Hh-ccCcEEEEcCCCCCCcC
Q psy7896 348 GKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-VTTMEE------AA-KEGGIFVTTTGCKDIIR 418 (718)
Q Consensus 348 GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v~~Lee------ll-~~aDiIi~atgt~~lI~ 418 (718)
|+ |.|+|. |.||..+++.++.+|++|++++.++.+...+...|.. +.+..+ +. ...|+++-+.|.. .-
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~~--~~ 224 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDK--VL 224 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSCHH--HH
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCCcH--HH
Confidence 45 999998 9999999999999999999998877664444334432 111111 11 2457887777754 33
Q ss_pred HHHHhcCCCCeEEEEcCCC
Q psy7896 419 GEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 419 ~e~l~~MK~gAiLIN~GRg 437 (718)
...++.++++..++.+|..
T Consensus 225 ~~~~~~l~~~G~iv~~G~~ 243 (324)
T 3nx4_A 225 AKVLAQMNYGGCVAACGLA 243 (324)
T ss_dssp HHHHHTEEEEEEEEECCCT
T ss_pred HHHHHHHhcCCEEEEEecC
Confidence 4667889999999999865
No 438
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=94.38 E-value=0.038 Score=58.82 Aligned_cols=64 Identities=14% Similarity=0.065 Sum_probs=47.2
Q ss_pred cEEEEEecChhHHH-HHHHHHhC-CCEEE-EEecCCccHHHHhhcCc-eecCHHHHhcc--CcEEEEcCCC
Q psy7896 349 KVAVVAGYGDVGKG-CAQSLRLF-GSRVI-VTEIDPINALQASMEGY-EVTTMEEAAKE--GGIFVTTTGC 413 (718)
Q Consensus 349 ktVGIIG~G~IG~~-vA~~l~~f-Ga~Vi-v~d~dp~~al~a~~~G~-~v~~Leell~~--aDiIi~atgt 413 (718)
.+|||||+|.||+. .+..++.. +++|. ++|+++.+..+ ...+. .+.++++++.. .|+|+++|.+
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 75 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKE-RYPQASIVRSFKELTEDPEIDLIVVNTPD 75 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGT-TCTTSEEESCSHHHHTCTTCCEEEECSCG
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHH-hCCCCceECCHHHHhcCCCCCEEEEeCCh
Confidence 58999999999997 67777666 77765 67888765321 11133 35689999976 8999998776
No 439
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=94.36 E-value=0.034 Score=59.10 Aligned_cols=89 Identities=16% Similarity=0.174 Sum_probs=60.3
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhC-CCEEEEEecCCccHHHHhhcCce-ecC----HHH----Hhc--cCcEEEEcCCC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLF-GSRVIVTEIDPINALQASMEGYE-VTT----MEE----AAK--EGGIFVTTTGC 413 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~f-Ga~Viv~d~dp~~al~a~~~G~~-v~~----Lee----ll~--~aDiIi~atgt 413 (718)
-.|++|.|+|.|.||..+++.++.+ |++|++++.++.+...+...|.. +.+ +.+ +.. ..|+++-++|.
T Consensus 185 ~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~v~~~~~g~g~Dvvid~~G~ 264 (359)
T 1h2b_A 185 YPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGS 264 (359)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccchHHHHHHHHhCCCCCcEEEECCCC
Confidence 3689999999999999999999999 99999998877654334444542 111 222 221 46888888776
Q ss_pred CC--CcCHHHHhcCCCCeEEEEcCCC
Q psy7896 414 KD--IIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 414 ~~--lI~~e~l~~MK~gAiLIN~GRg 437 (718)
.. .+. ..++. ++..++.+|..
T Consensus 265 ~~~~~~~-~~~~~--~~G~~v~~g~~ 287 (359)
T 1h2b_A 265 QATVDYT-PYLLG--RMGRLIIVGYG 287 (359)
T ss_dssp HHHHHHG-GGGEE--EEEEEEECCCS
T ss_pred chHHHHH-HHhhc--CCCEEEEEeCC
Confidence 42 222 23444 77778877753
No 440
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=94.35 E-value=0.039 Score=58.15 Aligned_cols=81 Identities=11% Similarity=0.125 Sum_probs=54.5
Q ss_pred cEEEEEecChhHHHHHHHHHhC-CCEE-EEEecCCccHHHHhhcCce-ecCHHHHhccCcEEEEcCCCCCCcCHHHHhcC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLF-GSRV-IVTEIDPINALQASMEGYE-VTTMEEAAKEGGIFVTTTGCKDIIRGEHFLQM 425 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~f-Ga~V-iv~d~dp~~al~a~~~G~~-v~~Leell~~aDiIi~atgt~~lI~~e~l~~M 425 (718)
.+|+|||+|++|+.+++.+... ++++ .++|+++...+. .|.. +.++++++.+.|+|+.++.+.-. -......+
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~~~~---~gv~~~~d~~~ll~~~DvViiatp~~~h-~~~~~~al 79 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTK---TPVFDVADVDKHADDVDVLFLCMGSATD-IPEQAPKF 79 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSS---SCEEEGGGGGGTTTTCSEEEECSCTTTH-HHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHHhhc---CCCceeCCHHHHhcCCCEEEEcCCcHHH-HHHHHHHH
Confidence 4799999999999999998776 5665 468877544111 2433 24677877889999999876421 12234556
Q ss_pred CCCeEEEE
Q psy7896 426 RDDAIVCN 433 (718)
Q Consensus 426 K~gAiLIN 433 (718)
+.|.-++.
T Consensus 80 ~aG~~Vv~ 87 (320)
T 1f06_A 80 AQFACTVD 87 (320)
T ss_dssp TTTSEEEC
T ss_pred HCCCEEEE
Confidence 66665444
No 441
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=94.33 E-value=0.056 Score=57.33 Aligned_cols=83 Identities=13% Similarity=0.093 Sum_probs=55.5
Q ss_pred cEEEEEecChhHHHHHHHHHhC-CCEEE-EEecCCccHHH-HhhcCc-----eecCHHHHhc--cCcEEEEcCCCCCCcC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLF-GSRVI-VTEIDPINALQ-ASMEGY-----EVTTMEEAAK--EGGIFVTTTGCKDIIR 418 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~f-Ga~Vi-v~d~dp~~al~-a~~~G~-----~v~~Leell~--~aDiIi~atgt~~lI~ 418 (718)
.+|||||+|+||+.+++.+... +++++ ++|+++.+... +...|+ .+.++++++. +.|+|++++.+. .--
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~-~h~ 85 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTS-LHV 85 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGG-GHH
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChH-HHH
Confidence 5899999999999999988775 56654 68887755432 222342 2468999986 589999988763 111
Q ss_pred HHHHhcCCCCe-EEE
Q psy7896 419 GEHFLQMRDDA-IVC 432 (718)
Q Consensus 419 ~e~l~~MK~gA-iLI 432 (718)
.-....++.|. +++
T Consensus 86 ~~~~~al~aGk~V~~ 100 (362)
T 1ydw_A 86 EWAIKAAEKGKHILL 100 (362)
T ss_dssp HHHHHHHTTTCEEEE
T ss_pred HHHHHHHHCCCeEEE
Confidence 22234566665 444
No 442
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.32 E-value=0.043 Score=60.21 Aligned_cols=67 Identities=21% Similarity=0.243 Sum_probs=49.7
Q ss_pred cccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccH--HHHhhcCceec--C-HHHHhccCcEEEEcCC
Q psy7896 345 MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINA--LQASMEGYEVT--T-MEEAAKEGGIFVTTTG 412 (718)
Q Consensus 345 eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~a--l~a~~~G~~v~--~-Leell~~aDiIi~atg 412 (718)
++.+|+|.|||.|..|+..|+.|...|.+|+++|..+... .... .|..+. . ..+.+..+|.|+..++
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~~~d~vV~s~g 73 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVASPG 73 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHHHHHTCSEEEECTT
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHHHhccCCEEEeCCC
Confidence 3678999999999999999999999999999999765432 1112 455542 1 2456668999888654
No 443
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=94.28 E-value=0.06 Score=56.60 Aligned_cols=65 Identities=9% Similarity=-0.012 Sum_probs=47.5
Q ss_pred cEEEEEecChhHHH-HHHHHHhC-CCEEE-EEecCCccHHHH-hhcCc--eecCHHHHhc--cCcEEEEcCCC
Q psy7896 349 KVAVVAGYGDVGKG-CAQSLRLF-GSRVI-VTEIDPINALQA-SMEGY--EVTTMEEAAK--EGGIFVTTTGC 413 (718)
Q Consensus 349 ktVGIIG~G~IG~~-vA~~l~~f-Ga~Vi-v~d~dp~~al~a-~~~G~--~v~~Leell~--~aDiIi~atgt 413 (718)
.+|||||+|.||+. .+..++.. +++|. ++|+++.++.+. ...|. .+.++++++. +.|+|+++|.+
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~ 96 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPT 96 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCG
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCC
Confidence 48999999999985 56666665 77866 688888664332 23454 3578999986 47999998775
No 444
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.28 E-value=0.11 Score=58.18 Aligned_cols=37 Identities=30% Similarity=0.346 Sum_probs=33.7
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
..|++|.|||.|.+|..+|..++.+|.+|+++++.+.
T Consensus 353 ~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 353 FKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp GBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 4689999999999999999999999999999987654
No 445
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=94.27 E-value=0.19 Score=55.31 Aligned_cols=34 Identities=26% Similarity=0.321 Sum_probs=31.4
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEID 380 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~d 380 (718)
.++++.|||.|.||..+|..++.+|.+|++++++
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 4689999999999999999999999999998764
No 446
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=94.24 E-value=0.14 Score=52.75 Aligned_cols=39 Identities=18% Similarity=0.343 Sum_probs=34.8
Q ss_pred ccccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 344 IMLAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 344 ~eL~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
..++||++.|.|. |.||+++|+.|...|++|++.++++.
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 82 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEE 82 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 4689999999997 56999999999999999999988764
No 447
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=94.23 E-value=0.058 Score=56.60 Aligned_cols=66 Identities=17% Similarity=0.060 Sum_probs=48.6
Q ss_pred cEEEEEecChhHHHHHHHHHhCC---CEE-EEEecCCccHHHH-hhcCc--eecCHHHHhc--cCcEEEEcCCCC
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFG---SRV-IVTEIDPINALQA-SMEGY--EVTTMEEAAK--EGGIFVTTTGCK 414 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fG---a~V-iv~d~dp~~al~a-~~~G~--~v~~Leell~--~aDiIi~atgt~ 414 (718)
.+|||||+|.||+..++.++..+ +++ -++|+++.++... ...|. .+.++++++. +.|+|++++.+.
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 77 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHP 77 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGG
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcH
Confidence 47999999999999999998764 354 4578877654322 23344 3578999997 689999987653
No 448
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.21 E-value=0.13 Score=54.25 Aligned_cols=64 Identities=17% Similarity=0.195 Sum_probs=46.6
Q ss_pred cEEEEEec-ChhHHHHHHHHHhCC--CEEEEEecCCccHH-HHhhcC-----cee----cCHHHHhccCcEEEEcCC
Q psy7896 349 KVAVVAGY-GDVGKGCAQSLRLFG--SRVIVTEIDPINAL-QASMEG-----YEV----TTMEEAAKEGGIFVTTTG 412 (718)
Q Consensus 349 ktVGIIG~-G~IG~~vA~~l~~fG--a~Viv~d~dp~~al-~a~~~G-----~~v----~~Leell~~aDiIi~atg 412 (718)
++|+|||. |.||+.++..|...| -+|.++|+++.... ....++ ... .+++++++.+|+|+.+.+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag 77 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAG 77 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCC
Confidence 37999998 999999999998767 68999999882211 011222 122 257889999999998754
No 449
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=94.21 E-value=0.068 Score=57.04 Aligned_cols=66 Identities=15% Similarity=0.179 Sum_probs=46.5
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcC----ce---ecCHHHHhccCcEEEEcCCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEG----YE---VTTMEEAAKEGGIFVTTTGC 413 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G----~~---v~~Leell~~aDiIi~atgt 413 (718)
+.++|+|+|.|.||+.+|+.|.. ..+|.+.++++.....+.... .. ...+.++++++|+|+.+.+.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~ 87 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPG 87 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred CccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCC
Confidence 34579999999999999999975 468999988775433222111 11 12466788999999987653
No 450
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=94.19 E-value=0.089 Score=55.85 Aligned_cols=90 Identities=18% Similarity=0.205 Sum_probs=59.8
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHH---Hhhc-------Ccee--cCHHHHhccCcEEEEcCCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQ---ASME-------GYEV--TTMEEAAKEGGIFVTTTGC 413 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~---a~~~-------G~~v--~~Leell~~aDiIi~atgt 413 (718)
..++|+|||.|.+|..+|..+...|. +|.++|+++.+... ...+ ...+ .+-.+.++.||+|+++.+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag~ 83 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAGV 83 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCCc
Confidence 45799999999999999999876666 99999998865310 1111 1122 1235789999999998553
Q ss_pred ---CCC-----c--CH-------HHHhcCCCCeEEEEcCC
Q psy7896 414 ---KDI-----I--RG-------EHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 414 ---~~l-----I--~~-------e~l~~MK~gAiLIN~GR 436 (718)
.++ + |. +.+....+++++++++.
T Consensus 84 p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 123 (321)
T 3p7m_A 84 PRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITN 123 (321)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 222 1 11 12334458889999864
No 451
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=94.19 E-value=0.085 Score=55.60 Aligned_cols=88 Identities=19% Similarity=0.213 Sum_probs=57.4
Q ss_pred cEEEEEecChhHHHHHHHHHhCC--CEEEEEecCCccHHH-H--hhcC------cee-cCHHHHhccCcEEEEcCCCC--
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFG--SRVIVTEIDPINALQ-A--SMEG------YEV-TTMEEAAKEGGIFVTTTGCK-- 414 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fG--a~Viv~d~dp~~al~-a--~~~G------~~v-~~Leell~~aDiIi~atgt~-- 414 (718)
++|+|||.|.||..++..+...+ -++.++|+++.+... + ..+. ..+ .+-.+.++.||+|+++.+..
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQR 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 47999999999999999887655 589999998743321 1 1121 111 12367799999999975532
Q ss_pred -CC-------cCH-------HHHhcCCCCeEEEEcCC
Q psy7896 415 -DI-------IRG-------EHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 415 -~l-------I~~-------e~l~~MK~gAiLIN~GR 436 (718)
++ .|. +.+....++++++|++-
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (310)
T 2xxj_A 81 PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN 117 (310)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 22 111 22333478899999754
No 452
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=94.18 E-value=0.046 Score=55.31 Aligned_cols=39 Identities=23% Similarity=0.409 Sum_probs=34.7
Q ss_pred cccCcEEEEEec---ChhHHHHHHHHHhCCCEEEEEecCCcc
Q psy7896 345 MLAGKVAVVAGY---GDVGKGCAQSLRLFGSRVIVTEIDPIN 383 (718)
Q Consensus 345 eL~GktVGIIG~---G~IG~~vA~~l~~fGa~Viv~d~dp~~ 383 (718)
.+.||++.|.|. |.||+++|+.|...|++|+++++++..
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~ 45 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR 45 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHH
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHH
Confidence 478999999994 899999999999999999999887643
No 453
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=94.13 E-value=0.046 Score=58.69 Aligned_cols=68 Identities=16% Similarity=0.240 Sum_probs=48.7
Q ss_pred ccCcEEEEEec-ChhHHHHHHHHHhCCC--EEEEEecCCccHHH-H--hhc------Cce-ecCHHHHhccCcEEEEcCC
Q psy7896 346 LAGKVAVVAGY-GDVGKGCAQSLRLFGS--RVIVTEIDPINALQ-A--SME------GYE-VTTMEEAAKEGGIFVTTTG 412 (718)
Q Consensus 346 L~GktVGIIG~-G~IG~~vA~~l~~fGa--~Viv~d~dp~~al~-a--~~~------G~~-v~~Leell~~aDiIi~atg 412 (718)
+.+++|+|||. |.||+.+|..+..+|. +|.++|+++.+... + ..+ ... ..+..+.++.||+|+++.|
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 35789999998 9999999998877774 89999987643211 0 111 112 2467889999999998865
Q ss_pred C
Q psy7896 413 C 413 (718)
Q Consensus 413 t 413 (718)
.
T Consensus 86 ~ 86 (343)
T 3fi9_A 86 A 86 (343)
T ss_dssp -
T ss_pred C
Confidence 3
No 454
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=94.10 E-value=0.041 Score=62.05 Aligned_cols=102 Identities=14% Similarity=0.094 Sum_probs=65.5
Q ss_pred cEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHh----hcCceecCHHHH-hccCcEEEEcCCCC--CCcCHHH
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQAS----MEGYEVTTMEEA-AKEGGIFVTTTGCK--DIIRGEH 421 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~----~~G~~v~~Leel-l~~aDiIi~atgt~--~lI~~e~ 421 (718)
+++.|+|+|++|+.+|+.|...|.+|+++|.||.+..+.. .++.....|+++ ++++|.++.++++. +++....
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ 428 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQAGIDRASGIIVTTNDDSTNIFLTLA 428 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEESCSSSSTHHHHHTTTSCSEEEECCSCHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEEeCCCCHHHHHhcCccccCEEEEECCCchHHHHHHHH
Confidence 8999999999999999999999999999999986532211 122222345555 77899998887752 2333344
Q ss_pred HhcCCCCeEEEEcCCCCccccHHHHhccccc
Q psy7896 422 FLQMRDDAIVCNIGHFDCEIQVSWLDKNAVE 452 (718)
Q Consensus 422 l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~ 452 (718)
...+.+...++--.+. .-..+.|...+.+
T Consensus 429 ak~l~~~~~iiar~~~--~~~~~~l~~~G~d 457 (565)
T 4gx0_A 429 CRHLHSHIRIVARANG--EENVDQLYAAGAD 457 (565)
T ss_dssp HHHHCSSSEEEEEESS--TTSHHHHHHHTCS
T ss_pred HHHHCCCCEEEEEECC--HHHHHHHHHcCCC
Confidence 4556666444433332 2233445544433
No 455
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=94.08 E-value=0.15 Score=56.53 Aligned_cols=36 Identities=14% Similarity=0.232 Sum_probs=32.6
Q ss_pred cCcEEEEEecChhHHHHHHHHHhC---CCEEEEEecCCc
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLF---GSRVIVTEIDPI 382 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~f---Ga~Viv~d~dp~ 382 (718)
.++++.|||.|.||..+|..++.+ |.+|+++++.+.
T Consensus 190 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~ 228 (495)
T 2wpf_A 190 PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNL 228 (495)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCc
Confidence 368999999999999999999999 999999987653
No 456
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=94.00 E-value=0.066 Score=52.51 Aligned_cols=37 Identities=16% Similarity=0.284 Sum_probs=33.5
Q ss_pred ccCcEEEEEe-cChhHHHHHHHHHhCCC--EEEEEecCCc
Q psy7896 346 LAGKVAVVAG-YGDVGKGCAQSLRLFGS--RVIVTEIDPI 382 (718)
Q Consensus 346 L~GktVGIIG-~G~IG~~vA~~l~~fGa--~Viv~d~dp~ 382 (718)
+.+|+|.|.| .|.||+.+++.|...|. +|+++++++.
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~ 55 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL 55 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCC
Confidence 5789999999 59999999999999999 9999988764
No 457
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=93.96 E-value=0.17 Score=56.43 Aligned_cols=34 Identities=26% Similarity=0.209 Sum_probs=30.8
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEID 380 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~d 380 (718)
..+++.|||.|.||..+|..++.+|.+|++++++
T Consensus 209 ~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 209 CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 3567999999999999999999999999998764
No 458
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=93.96 E-value=0.12 Score=54.85 Aligned_cols=65 Identities=15% Similarity=0.219 Sum_probs=46.5
Q ss_pred CcEEEEEe-cChhHHHHHHHHHhCC--CEEEEEecCCccHHH-Hhhc-Cc--ee------cCHHHHhccCcEEEEcCC
Q psy7896 348 GKVAVVAG-YGDVGKGCAQSLRLFG--SRVIVTEIDPINALQ-ASME-GY--EV------TTMEEAAKEGGIFVTTTG 412 (718)
Q Consensus 348 GktVGIIG-~G~IG~~vA~~l~~fG--a~Viv~d~dp~~al~-a~~~-G~--~v------~~Leell~~aDiIi~atg 412 (718)
.++|+|+| .|.||..++..|...| .+|.++|+++..... ...+ .. .+ .++.++++.+|+|+.+.+
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag 85 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAG 85 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCC
Confidence 46899999 8999999999998777 689999987752110 0111 11 11 146788999999998755
No 459
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.93 E-value=0.092 Score=55.63 Aligned_cols=91 Identities=16% Similarity=0.158 Sum_probs=60.1
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCC-EEEEEecCC--ccH------HHHhh----cC--ceecCHHHHhccCcEEEEc
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDP--INA------LQASM----EG--YEVTTMEEAAKEGGIFVTT 410 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp--~~a------l~a~~----~G--~~v~~Leell~~aDiIi~a 410 (718)
...++|+|||.|.+|..+|..+...|. +|.++|+++ .+. +.... .. ....+-.+.+++||+|+.+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIia 85 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVIT 85 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEEC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEe
Confidence 356899999999999999999988888 999999985 211 11000 01 1112224678999999998
Q ss_pred CCC---CCC-----c--C----H---HHHhcCCCCeEEEEcCC
Q psy7896 411 TGC---KDI-----I--R----G---EHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 411 tgt---~~l-----I--~----~---e~l~~MK~gAiLIN~GR 436 (718)
.|. .++ + | + +.+....++++++|++.
T Consensus 86 ag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 86 AGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 553 222 1 1 1 22334468899999885
No 460
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.89 E-value=0.055 Score=51.53 Aligned_cols=39 Identities=26% Similarity=0.342 Sum_probs=35.7
Q ss_pred cCCcEEEEEecCCCChhHHHHHHhc-CCeEEEeecCchhh
Q psy7896 267 LAGKVAVVAGYGDVGKGCAQSLRLF-GSRVIVTEIDPINA 305 (718)
Q Consensus 267 ~~Gk~vvViGyG~vG~~~A~aLra~-Gv~VtV~D~dp~r~ 305 (718)
..+++++|+|+|.+|..+++.|++. |+.|+++|.++.+.
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~ 76 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAA 76 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHH
Confidence 4578899999999999999999999 99999999998765
No 461
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=93.89 E-value=0.1 Score=55.48 Aligned_cols=65 Identities=25% Similarity=0.276 Sum_probs=46.1
Q ss_pred cEEEEEecChhHHHHHHHHHhC-CCEEE-EEecCCccHHHH-hhcCce------------------e-cCHHHHhccCcE
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLF-GSRVI-VTEIDPINALQA-SMEGYE------------------V-TTMEEAAKEGGI 406 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~f-Ga~Vi-v~d~dp~~al~a-~~~G~~------------------v-~~Leell~~aDi 406 (718)
.+|||+|+|.||+.+++.+... ++++. ++|+++...... ..+|+. + .+.++++.+.|+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDv 82 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI 82 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCE
Confidence 3799999999999999999875 45654 467665443221 123321 1 368888889999
Q ss_pred EEEcCCC
Q psy7896 407 FVTTTGC 413 (718)
Q Consensus 407 Ii~atgt 413 (718)
|+.+|++
T Consensus 83 V~~aTp~ 89 (334)
T 2czc_A 83 IVDATPG 89 (334)
T ss_dssp EEECCST
T ss_pred EEECCCc
Confidence 9999876
No 462
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=93.87 E-value=0.17 Score=57.35 Aligned_cols=34 Identities=26% Similarity=0.229 Sum_probs=31.3
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEID 380 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~d 380 (718)
.+++|.|||.|.+|..+|..++.+|.+|+++++.
T Consensus 285 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 285 FPGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 4678999999999999999999999999998765
No 463
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=93.87 E-value=0.075 Score=56.27 Aligned_cols=89 Identities=20% Similarity=0.187 Sum_probs=61.2
Q ss_pred ccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEE-ecCCcc---HHHHhhcCce-ecCH--------HHHhc---cCcEEE
Q psy7896 346 LAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVT-EIDPIN---ALQASMEGYE-VTTM--------EEAAK---EGGIFV 408 (718)
Q Consensus 346 L~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~-d~dp~~---al~a~~~G~~-v~~L--------eell~---~aDiIi 408 (718)
-.|++|.|+|. |.||..+++.++.+|++|+++ +.++.. ...+...|.. +.+. .++.. ..|+++
T Consensus 166 ~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvi 245 (357)
T 1zsy_A 166 QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLAL 245 (357)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEE
T ss_pred CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEE
Confidence 36899999998 999999999999999987765 343321 1122234542 2222 12222 379999
Q ss_pred EcCCCCCCcCHHHHhcCCCCeEEEEcCC
Q psy7896 409 TTTGCKDIIRGEHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 409 ~atgt~~lI~~e~l~~MK~gAiLIN~GR 436 (718)
-++|.... .+.++.++++..++.+|.
T Consensus 246 d~~g~~~~--~~~~~~l~~~G~iv~~G~ 271 (357)
T 1zsy_A 246 NCVGGKSS--TELLRQLARGGTMVTYGG 271 (357)
T ss_dssp ESSCHHHH--HHHHTTSCTTCEEEECCC
T ss_pred ECCCcHHH--HHHHHhhCCCCEEEEEec
Confidence 88876433 357899999999999874
No 464
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=93.86 E-value=0.046 Score=57.05 Aligned_cols=89 Identities=20% Similarity=0.126 Sum_probs=63.0
Q ss_pred cCc-EEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCce-ecCHHHH----h-----ccCcEEEEcCCCC
Q psy7896 347 AGK-VAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYE-VTTMEEA----A-----KEGGIFVTTTGCK 414 (718)
Q Consensus 347 ~Gk-tVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~-v~~Leel----l-----~~aDiIi~atgt~ 414 (718)
.|+ +|.|+|. |.||..+++.++.+|++|++++.++.+...+...|.. +.+..+. + ...|+++.++|..
T Consensus 149 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~~ 228 (330)
T 1tt7_A 149 PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGK 228 (330)
T ss_dssp GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCTH
T ss_pred CCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcHH
Confidence 354 8999998 9999999999999999999998876654333333432 2222221 1 1368888888763
Q ss_pred CCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 415 DIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 415 ~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
. -.+.++.++++..++.+|..
T Consensus 229 -~-~~~~~~~l~~~G~iv~~G~~ 249 (330)
T 1tt7_A 229 -Q-LASLLSKIQYGGSVAVSGLT 249 (330)
T ss_dssp -H-HHHHHTTEEEEEEEEECCCS
T ss_pred -H-HHHHHHhhcCCCEEEEEecC
Confidence 2 34567888999999988864
No 465
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.80 E-value=0.18 Score=55.75 Aligned_cols=36 Identities=19% Similarity=0.208 Sum_probs=32.6
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.++++.|||.|.||..+|..++.+|.+|+++++.+.
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 216 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDH 216 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 468999999999999999999999999999987653
No 466
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=93.80 E-value=0.1 Score=50.12 Aligned_cols=64 Identities=13% Similarity=0.132 Sum_probs=45.6
Q ss_pred cEEEEEe-cChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec--CHH----HHhccCcEEEEcCCC
Q psy7896 349 KVAVVAG-YGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT--TME----EAAKEGGIFVTTTGC 413 (718)
Q Consensus 349 ktVGIIG-~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~--~Le----ell~~aDiIi~atgt 413 (718)
++|.|.| .|.||+.+++.|...|.+|++.++++.+..... .+..+. ++. +.+...|+|+.+.+.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 4799999 599999999999999999999998875432211 333321 221 567788888876543
No 467
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=93.79 E-value=0.11 Score=55.71 Aligned_cols=85 Identities=22% Similarity=0.279 Sum_probs=51.2
Q ss_pred cEEEEEecChhHHHHHHHHHhC-CCEEE-EEecCCccHH-HHhhcCceec------------------CHHHHhccCcEE
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLF-GSRVI-VTEIDPINAL-QASMEGYEVT------------------TMEEAAKEGGIF 407 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~f-Ga~Vi-v~d~dp~~al-~a~~~G~~v~------------------~Leell~~aDiI 407 (718)
.+|||+|+|+||+.+++.+... ++++. ++|+++.... .+...|+.+. +.++++.++|++
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV 81 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV 81 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEE
Confidence 3799999999999999998765 56665 4566554321 1222233221 344566689999
Q ss_pred EEcCCCCCCcCHHHH-hcCCCCeEEEEcC
Q psy7896 408 VTTTGCKDIIRGEHF-LQMRDDAIVCNIG 435 (718)
Q Consensus 408 i~atgt~~lI~~e~l-~~MK~gAiLIN~G 435 (718)
+.+|+.. ...+.. ..++.|+.+|..|
T Consensus 82 ~~aTp~~--~s~~~a~~~~~aG~kvV~~s 108 (340)
T 1b7g_O 82 VDTTPNG--VGAQYKPIYLQLQRNAIFQG 108 (340)
T ss_dssp EECCSTT--HHHHHHHHHHHTTCEEEECT
T ss_pred EECCCCc--hhHHHHHHHHHcCCeEEEeC
Confidence 9998763 112222 2235566555544
No 468
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=93.77 E-value=0.054 Score=54.53 Aligned_cols=65 Identities=12% Similarity=0.230 Sum_probs=42.8
Q ss_pred CcEEEEEecChhHHHHHHH--HHhCCCEEE-EEecCCccHHHHhhcCce---ecCHHHHhccCcEEEEcCCC
Q psy7896 348 GKVAVVAGYGDVGKGCAQS--LRLFGSRVI-VTEIDPINALQASMEGYE---VTTMEEAAKEGGIFVTTTGC 413 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~--l~~fGa~Vi-v~d~dp~~al~a~~~G~~---v~~Leell~~aDiIi~atgt 413 (718)
.++|+|||.|++|+.+++. ....|.++. ++|.||.+.-. ...|+. ..++++++++.|++++++.+
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~-~i~gv~V~~~~dl~eli~~~D~ViIAvPs 155 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGT-EVGGVPVYNLDDLEQHVKDESVAILTVPA 155 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTC-EETTEEEEEGGGHHHHCSSCCEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHh-HhcCCeeechhhHHHHHHhCCEEEEecCc
Confidence 3679999999999999993 456688766 58888875422 123443 34678888766999888654
No 469
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=93.75 E-value=0.091 Score=50.76 Aligned_cols=65 Identities=17% Similarity=0.100 Sum_probs=46.2
Q ss_pred cEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec--CHH----HHhccCcEEEEcCCC
Q psy7896 349 KVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT--TME----EAAKEGGIFVTTTGC 413 (718)
Q Consensus 349 ktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~--~Le----ell~~aDiIi~atgt 413 (718)
++|.|.|. |.||+.+++.|...|.+|++..+++.........++.+. ++. ++++..|+|+.+.+.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 46899997 999999999999999999999887754332222333321 221 567788888876544
No 470
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=93.72 E-value=0.097 Score=55.18 Aligned_cols=68 Identities=18% Similarity=0.126 Sum_probs=46.5
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhC--------CCEEE-EEecCCccHHHH-hhcCc--eecCHHHHhc--cCcEEEEcC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLF--------GSRVI-VTEIDPINALQA-SMEGY--EVTTMEEAAK--EGGIFVTTT 411 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~f--------Ga~Vi-v~d~dp~~al~a-~~~G~--~v~~Leell~--~aDiIi~at 411 (718)
++--+|||||+|.||+.-++.++.+ +++|+ ++|+++.++.+. ...|. .+.++++++. +.|+|+++|
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~Iat 102 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTT 102 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECS
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECC
Confidence 3446899999999999877766543 56755 588888765432 23354 3568999986 478999887
Q ss_pred CC
Q psy7896 412 GC 413 (718)
Q Consensus 412 gt 413 (718)
.+
T Consensus 103 P~ 104 (393)
T 4fb5_A 103 PN 104 (393)
T ss_dssp CG
T ss_pred Ch
Confidence 65
No 471
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=93.71 E-value=0.12 Score=56.07 Aligned_cols=85 Identities=13% Similarity=0.149 Sum_probs=55.4
Q ss_pred hhcccccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhc--Ccee------cCHHHHhccCcEEEEcCC
Q psy7896 341 YLDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASME--GYEV------TTMEEAAKEGGIFVTTTG 412 (718)
Q Consensus 341 ~~g~eL~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~--G~~v------~~Leell~~aDiIi~atg 412 (718)
|++..+.+++|+|+|.|..|+.+++.++.+|.+|+++| ++........+ -..+ ..+.++++.+|+++.-..
T Consensus 17 ~~~~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~e~e 95 (403)
T 3k5i_A 17 FQGHMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTAEIE 95 (403)
T ss_dssp ----CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEESSS
T ss_pred EeccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEECCC
Confidence 44566789999999999999999999999999999998 65432211122 1111 124567888998866433
Q ss_pred CCCCcCHHHHhcCCCCe
Q psy7896 413 CKDIIRGEHFLQMRDDA 429 (718)
Q Consensus 413 t~~lI~~e~l~~MK~gA 429 (718)
+ ++.+.+..+..|.
T Consensus 96 ~---~~~~~l~~l~~g~ 109 (403)
T 3k5i_A 96 H---VDTYALEEVASEV 109 (403)
T ss_dssp C---SCHHHHHHHTTTS
T ss_pred C---CCHHHHHHHHcCC
Confidence 3 3555666565543
No 472
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.63 E-value=0.072 Score=48.37 Aligned_cols=38 Identities=18% Similarity=0.250 Sum_probs=34.2
Q ss_pred CCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhh
Q psy7896 268 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINA 305 (718)
Q Consensus 268 ~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~ 305 (718)
..++++|+|+|.+|..+++.|.+.|..|+++|.++.+.
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~ 42 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKI 42 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence 35789999999999999999999999999999988764
No 473
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=93.49 E-value=0.038 Score=51.85 Aligned_cols=85 Identities=13% Similarity=0.135 Sum_probs=58.4
Q ss_pred CcEEEEEec----ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec-CHHHHhccCcEEEEcCCCCCC---cCH
Q psy7896 348 GKVAVVAGY----GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT-TMEEAAKEGGIFVTTTGCKDI---IRG 419 (718)
Q Consensus 348 GktVGIIG~----G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~-~Leell~~aDiIi~atgt~~l---I~~ 419 (718)
-++|+|||. |++|..+++.+...|.+|..+ +|....+ ...|..+. +++|+....|++++++....+ +.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~v--np~~~g~-~i~G~~~~~sl~el~~~~Dlvii~vp~~~v~~v~~- 88 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPV--SPKVAGK-TLLGQQGYATLADVPEKVDMVDVFRNSEAAWGVAQ- 88 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEE--CSSSTTS-EETTEECCSSTTTCSSCCSEEECCSCSTHHHHHHH-
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEe--CCccccc-ccCCeeccCCHHHcCCCCCEEEEEeCHHHHHHHHH-
Confidence 578999999 899999999999989886555 5543101 12466654 688888889999988654322 21
Q ss_pred HHHhcCCCCeEEEEcCCC
Q psy7896 420 EHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 420 e~l~~MK~gAiLIN~GRg 437 (718)
+ +.....++++++.|..
T Consensus 89 ~-~~~~g~~~i~i~~~~~ 105 (145)
T 2duw_A 89 E-AIAIGAKTLWLQLGVI 105 (145)
T ss_dssp H-HHHHTCCEEECCTTCC
T ss_pred H-HHHcCCCEEEEcCChH
Confidence 2 2235667788877654
No 474
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=93.49 E-value=0.071 Score=52.66 Aligned_cols=68 Identities=10% Similarity=0.085 Sum_probs=47.2
Q ss_pred ccCcEEEEEe-cChhHHHHHHHHHhCC-CEEEEEecCCccHHHHhhcCcee--------cCHHHHhccCcEEEEcCCC
Q psy7896 346 LAGKVAVVAG-YGDVGKGCAQSLRLFG-SRVIVTEIDPINALQASMEGYEV--------TTMEEAAKEGGIFVTTTGC 413 (718)
Q Consensus 346 L~GktVGIIG-~G~IG~~vA~~l~~fG-a~Viv~d~dp~~al~a~~~G~~v--------~~Leell~~aDiIi~atgt 413 (718)
...|+|.|.| .|.||+.+++.|...| .+|+++++++....+....+..+ .+++++++..|+|+.+.+.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~ 98 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTG 98 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence 3458999999 6999999999999999 89999988775422111112221 2345667788888866543
No 475
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=93.48 E-value=0.22 Score=54.84 Aligned_cols=35 Identities=23% Similarity=0.154 Sum_probs=31.6
Q ss_pred cCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 347 AGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 347 ~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
..++|.|||.|.||..+|..++.+|.+|+++++.+
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI 218 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc
Confidence 45789999999999999999999999999987654
No 476
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=93.44 E-value=0.16 Score=53.21 Aligned_cols=84 Identities=11% Similarity=-0.059 Sum_probs=56.3
Q ss_pred cEEEEEecChhHH-HHHHHHHhCCCEE-EEEecCCccHHHHh-hc-Cc-eecCHHHHhc--cCcEEEEcCCCCCCcCHHH
Q psy7896 349 KVAVVAGYGDVGK-GCAQSLRLFGSRV-IVTEIDPINALQAS-ME-GY-EVTTMEEAAK--EGGIFVTTTGCKDIIRGEH 421 (718)
Q Consensus 349 ktVGIIG~G~IG~-~vA~~l~~fGa~V-iv~d~dp~~al~a~-~~-G~-~v~~Leell~--~aDiIi~atgt~~lI~~e~ 421 (718)
.+|||||+|.+|. .+++.++.-|+++ -++|+++.++.... .. +. .+.+++++++ +.|+|+++|.+. .--.-.
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~-~h~~~~ 83 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPC-DRAELA 83 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGG-GHHHHH
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChh-hHHHHH
Confidence 5899999999996 6777777678986 57898887543322 22 33 3468999997 689999988753 111222
Q ss_pred HhcCCCCe-EEEE
Q psy7896 422 FLQMRDDA-IVCN 433 (718)
Q Consensus 422 l~~MK~gA-iLIN 433 (718)
+..++.|. +++.
T Consensus 84 ~~al~aGkhVl~E 96 (336)
T 2p2s_A 84 LRTLDAGKDFFTA 96 (336)
T ss_dssp HHHHHTTCEEEEC
T ss_pred HHHHHCCCcEEEe
Confidence 34556665 5554
No 477
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=93.42 E-value=0.12 Score=62.45 Aligned_cols=37 Identities=24% Similarity=0.174 Sum_probs=33.4
Q ss_pred ccCcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
..|++|.|||.|.+|..+|..++.+|.+|++++..+.
T Consensus 282 ~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~ 318 (965)
T 2gag_A 282 RAGARIAVATTNDSAYELVRELAATGGVVAVIDARSS 318 (965)
T ss_dssp ESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSS
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCc
Confidence 4579999999999999999999999999999987654
No 478
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=93.39 E-value=0.085 Score=55.66 Aligned_cols=88 Identities=14% Similarity=0.088 Sum_probs=57.5
Q ss_pred ccCcEEEEEec-ChhHHHHHHHHHhCC-CEEEEEecCCccHHHHhhcCcee-----cCHHHHh-----ccCcEEEEcCCC
Q psy7896 346 LAGKVAVVAGY-GDVGKGCAQSLRLFG-SRVIVTEIDPINALQASMEGYEV-----TTMEEAA-----KEGGIFVTTTGC 413 (718)
Q Consensus 346 L~GktVGIIG~-G~IG~~vA~~l~~fG-a~Viv~d~dp~~al~a~~~G~~v-----~~Leell-----~~aDiIi~atgt 413 (718)
-.|++|.|+|. |.||..+++.++.+| ++|++.+. +.+...+. .|... .++.+.+ ...|+++.++|.
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~-~~~~~~~~-~ga~~~~~~~~~~~~~~~~~~~~g~Dvv~d~~g~ 218 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS-TFKHEAIK-DSVTHLFDRNADYVQEVKRISAEGVDIVLDCLCG 218 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEEC-GGGHHHHG-GGSSEEEETTSCHHHHHHHHCTTCEEEEEEECC-
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCC-HHHHHHHH-cCCcEEEcCCccHHHHHHHhcCCCceEEEECCCc
Confidence 46899999999 999999999999985 68888763 33322222 44421 1233333 247999988887
Q ss_pred CCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 414 KDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 414 ~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
..+ ...++.++++..++.+|..
T Consensus 219 ~~~--~~~~~~l~~~G~~v~~G~~ 240 (349)
T 4a27_A 219 DNT--GKGLSLLKPLGTYILYGSS 240 (349)
T ss_dssp --------CTTEEEEEEEEEEC--
T ss_pred hhH--HHHHHHhhcCCEEEEECCC
Confidence 543 5678899999999999864
No 479
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=93.35 E-value=0.17 Score=52.10 Aligned_cols=38 Identities=24% Similarity=0.333 Sum_probs=33.7
Q ss_pred ccccCcEEEEEecC-h--hHHHHHHHHHhCCCEEEEEecCC
Q psy7896 344 IMLAGKVAVVAGYG-D--VGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 344 ~eL~GktVGIIG~G-~--IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
..+.||++.|.|.+ . ||+++|+.|...|++|++.++++
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~ 67 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGD 67 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSH
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35899999999984 4 99999999999999999998774
No 480
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=93.22 E-value=0.08 Score=58.85 Aligned_cols=66 Identities=15% Similarity=0.149 Sum_probs=47.2
Q ss_pred cEEEEEecChhHHHHHHHHHhC-CCEEE-EEecCCccHHHHhhc--C----------------------c-eecCHHHHh
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLF-GSRVI-VTEIDPINALQASME--G----------------------Y-EVTTMEEAA 401 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~f-Ga~Vi-v~d~dp~~al~a~~~--G----------------------~-~v~~Leell 401 (718)
-+|||||+|.||+.+++.+... |++|. ++|+++.++..+... | . .+.+.++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL 103 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLIL 103 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHh
Confidence 5899999999999999888654 66654 578888765433211 3 1 235788888
Q ss_pred c--cCcEEEEcCCCC
Q psy7896 402 K--EGGIFVTTTGCK 414 (718)
Q Consensus 402 ~--~aDiIi~atgt~ 414 (718)
. +.|+|+.+|++.
T Consensus 104 ~d~dIDaVviaTp~p 118 (446)
T 3upl_A 104 SNPLIDVIIDATGIP 118 (446)
T ss_dssp TCTTCCEEEECSCCH
T ss_pred cCCCCCEEEEcCCCh
Confidence 6 478888888763
No 481
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=93.21 E-value=1.2 Score=46.24 Aligned_cols=65 Identities=18% Similarity=0.270 Sum_probs=48.9
Q ss_pred CcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee-cCHHHHhc--cCcEEEEcCCCC
Q psy7896 348 GKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV-TTMEEAAK--EGGIFVTTTGCK 414 (718)
Q Consensus 348 GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v-~~Leell~--~aDiIi~atgt~ 414 (718)
..+|+|+|+ |++|+.+++.++..|.+ +++..+|.+.-+ ...|..+ .+++++.+ ..|+++.++...
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~-~V~~V~p~~~g~-~~~G~~vy~sl~el~~~~~~D~viI~tP~~ 75 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTK-MVGGVTPGKGGT-THLGLPVFNTVREAVAATGATASVIYVPAP 75 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTC-EETTEEEESSHHHHHHHHCCCEEEECCCGG
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCCcccc-eeCCeeccCCHHHHhhcCCCCEEEEecCHH
Confidence 468999999 99999999999888998 455566753211 1246554 47999988 899999887654
No 482
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=93.15 E-value=0.068 Score=57.76 Aligned_cols=55 Identities=24% Similarity=0.364 Sum_probs=42.4
Q ss_pred ccchhhHHHHHhhhccc-ccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchh
Q psy7896 249 YGCRESLVDGLKRATDI-MLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPIN 304 (718)
Q Consensus 249 ~G~~es~~~~i~r~t~~-~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r 304 (718)
||.-.++-..+.+ .+. .+.||+++|+|+|+||..+|+.|+++|.+|+++|.++.+
T Consensus 155 ~Gv~~~~~~~~~~-~G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~ 210 (355)
T 1c1d_A 155 VGVFEAMKATVAH-RGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTER 210 (355)
T ss_dssp HHHHHHHHHHHHH-TTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred HHHHHHHHHHHHh-cCCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence 3433333333333 355 589999999999999999999999999999999987654
No 483
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=93.13 E-value=0.065 Score=58.77 Aligned_cols=85 Identities=11% Similarity=0.084 Sum_probs=55.8
Q ss_pred CcEEEEEecChhHH-HHHHHHHhC-CCEE-EEEecCCccHHHH-hhcCce------ecCHHHHhc--cCcEEEEcCCCCC
Q psy7896 348 GKVAVVAGYGDVGK-GCAQSLRLF-GSRV-IVTEIDPINALQA-SMEGYE------VTTMEEAAK--EGGIFVTTTGCKD 415 (718)
Q Consensus 348 GktVGIIG~G~IG~-~vA~~l~~f-Ga~V-iv~d~dp~~al~a-~~~G~~------v~~Leell~--~aDiIi~atgt~~ 415 (718)
-.+|||||+|+||+ ..++.++.. ++++ .++|+++.+.... ...|.. +.++++++. +.|+|++++.+.
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~- 161 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNS- 161 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGG-
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCch-
Confidence 35899999999997 888888765 5675 4788887654322 223432 467899987 789999988763
Q ss_pred CcCHHHHhcCCCCe-EEEE
Q psy7896 416 IIRGEHFLQMRDDA-IVCN 433 (718)
Q Consensus 416 lI~~e~l~~MK~gA-iLIN 433 (718)
.--.-....++.|. +++.
T Consensus 162 ~h~~~~~~al~aGk~Vl~E 180 (433)
T 1h6d_A 162 LHAEFAIRAFKAGKHVMCE 180 (433)
T ss_dssp GHHHHHHHHHHTTCEEEEC
T ss_pred hHHHHHHHHHHCCCcEEEc
Confidence 21122234455555 4543
No 484
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.10 E-value=0.1 Score=52.48 Aligned_cols=65 Identities=20% Similarity=0.136 Sum_probs=45.3
Q ss_pred CcEEEEEecChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCceec--CHHHH-hccCcEEEEcCC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEVT--TMEEA-AKEGGIFVTTTG 412 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~--~Leel-l~~aDiIi~atg 412 (718)
.++|.|.|.|.||+.+++.|...|.+|++..+++.........++.+. ++.++ ++.+|+|+.+.+
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~d~vi~~a~ 72 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSLDGVTHLLISTA 72 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCCCTTCCEEEECCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccccCCCCEEEECCC
Confidence 378999999999999999999999999999888754332222343321 11111 567777776543
No 485
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=93.02 E-value=0.11 Score=54.78 Aligned_cols=86 Identities=21% Similarity=0.253 Sum_probs=55.5
Q ss_pred EEEEEecChhHHHHHHHHHhCCC-EEEEEecCCccHHH-H--hhc-------C--cee-cCHHHHhccCcEEEEcCCCC-
Q psy7896 350 VAVVAGYGDVGKGCAQSLRLFGS-RVIVTEIDPINALQ-A--SME-------G--YEV-TTMEEAAKEGGIFVTTTGCK- 414 (718)
Q Consensus 350 tVGIIG~G~IG~~vA~~l~~fGa-~Viv~d~dp~~al~-a--~~~-------G--~~v-~~Leell~~aDiIi~atgt~- 414 (718)
+|+|||.|.+|..+|..+...|. +|.++|+++.+... + ..+ . +.. .+. +.++.||+|+.+.+..
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~~ 79 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIGR 79 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCCC
Confidence 58999999999999998865565 79999998754211 0 011 2 122 344 6799999999985432
Q ss_pred --CCc-----------CH---HHHhcCCCCeEEEEcCC
Q psy7896 415 --DII-----------RG---EHFLQMRDDAIVCNIGH 436 (718)
Q Consensus 415 --~lI-----------~~---e~l~~MK~gAiLIN~GR 436 (718)
++- -. +.+....++++++|++-
T Consensus 80 k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 80 KPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp CSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 220 11 12333358899999754
No 486
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.00 E-value=0.09 Score=51.00 Aligned_cols=63 Identities=21% Similarity=0.152 Sum_probs=45.4
Q ss_pred cEEEEEe-cChhHHHHHHHHHhCCCEEEEEecCCccHHHHhhcCcee--------cCHHHHhccCcEEEEcCC
Q psy7896 349 KVAVVAG-YGDVGKGCAQSLRLFGSRVIVTEIDPINALQASMEGYEV--------TTMEEAAKEGGIFVTTTG 412 (718)
Q Consensus 349 ktVGIIG-~G~IG~~vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v--------~~Leell~~aDiIi~atg 412 (718)
++|.|.| .|.||+.+++.|...|.+|++.++++..... ...++.+ .++.++++..|+|+.+.+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~ 76 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-ENEHLKVKKADVSSLDEVCEVCKGADAVISAFN 76 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-CCTTEEEECCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-ccCceEEEEecCCCHHHHHHHhcCCCEEEEeCc
Confidence 7899999 5999999999999999999999887653211 1122221 235567778888887654
No 487
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=92.99 E-value=0.098 Score=54.75 Aligned_cols=91 Identities=16% Similarity=0.167 Sum_probs=61.4
Q ss_pred ccCcEEEEEecChhHHHHHHHHHh-CCCEEEEEecCCccHHHHhhcCcee------cCHHH-Hhc-----cCcEEEEcCC
Q psy7896 346 LAGKVAVVAGYGDVGKGCAQSLRL-FGSRVIVTEIDPINALQASMEGYEV------TTMEE-AAK-----EGGIFVTTTG 412 (718)
Q Consensus 346 L~GktVGIIG~G~IG~~vA~~l~~-fGa~Viv~d~dp~~al~a~~~G~~v------~~Lee-ll~-----~aDiIi~atg 412 (718)
..|.+|.|+|.|.+|...++.++. .|++|++++.++.+...+...|... .+..+ +.+ ..|+++.+++
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~ 241 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAV 241 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECCS
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEecc
Confidence 468999999999999999999985 5789999998876544444445321 12222 221 2456666665
Q ss_pred CCCCcCHHHHhcCCCCeEEEEcCCC
Q psy7896 413 CKDIIRGEHFLQMRDDAIVCNIGHF 437 (718)
Q Consensus 413 t~~lI~~e~l~~MK~gAiLIN~GRg 437 (718)
....+ ...++.++++..++.+|..
T Consensus 242 ~~~~~-~~~~~~l~~~G~~v~~g~~ 265 (348)
T 4eez_A 242 ARIAF-EQAVASLKPMGKMVAVAVP 265 (348)
T ss_dssp CHHHH-HHHHHTEEEEEEEEECCCC
T ss_pred Ccchh-heeheeecCCceEEEEecc
Confidence 53322 3567788888888888764
No 488
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=92.99 E-value=0.075 Score=55.12 Aligned_cols=76 Identities=18% Similarity=0.184 Sum_probs=50.7
Q ss_pred ccceEEEecCCcccccccccccchhhHHHHHhhhcccccCCcEEEEEecCCCChhHHHHHHhcCCeEEEeecCchhh
Q psy7896 229 LGVPAINVNDSVTKSKFDNLYGCRESLVDGLKRATDIMLAGKVAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPINA 305 (718)
Q Consensus 229 l~~Pv~~v~ds~~K~~fd~~~G~~es~~~~i~r~t~~~~~Gk~vvViGyG~vG~~~A~aLra~Gv~VtV~D~dp~r~ 305 (718)
.+++|+|..+.. +..--|....+|..+..+....+..+.|+++.|+|+|.+|+.+++.|+++|.+|++++..+.+.
T Consensus 116 ~gi~v~~~~~~~-~~~~~~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~ 191 (293)
T 3d4o_A 116 TNRTLVKLMERD-DIAIYNSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLL 191 (293)
T ss_dssp HTCEEEEGGGCH-HHHHHHHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred cCCeEEEecCCc-eeeeeccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 467887765310 0000122223333443333323456899999999999999999999999999999999877643
No 489
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=92.95 E-value=0.28 Score=49.87 Aligned_cols=39 Identities=38% Similarity=0.528 Sum_probs=33.9
Q ss_pred cccccCcEEEEEecC-hhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 343 DIMLAGKVAVVAGYG-DVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 343 g~eL~GktVGIIG~G-~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
...+.||++.|.|.+ .||+++|+.|...|++|++.+.++
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~ 65 (271)
T 3v2g_A 26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNA 65 (271)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 356899999999975 599999999999999999986554
No 490
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=92.94 E-value=0.22 Score=49.73 Aligned_cols=37 Identities=32% Similarity=0.509 Sum_probs=33.3
Q ss_pred ccCcEEEEEec-ChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 346 LAGKVAVVAGY-GDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 346 L~GktVGIIG~-G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
+.||++.|.|. |.||+++|+.|...|++|++.++++.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~ 39 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP 39 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 67899999998 67999999999999999999987764
No 491
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=92.92 E-value=0.23 Score=51.98 Aligned_cols=65 Identities=11% Similarity=0.065 Sum_probs=48.3
Q ss_pred cEEEEEec-ChhHHHHHHHHHhCCCEEE-EEecCCccHHHHhh-cCc-eecCHHHHh----------ccCcEEEEcCCC
Q psy7896 349 KVAVVAGY-GDVGKGCAQSLRLFGSRVI-VTEIDPINALQASM-EGY-EVTTMEEAA----------KEGGIFVTTTGC 413 (718)
Q Consensus 349 ktVGIIG~-G~IG~~vA~~l~~fGa~Vi-v~d~dp~~al~a~~-~G~-~v~~Leell----------~~aDiIi~atgt 413 (718)
.+|||||+ |.||+..++.++..+.+++ ++|+++.++..+.. .+. .+.++++++ .+.|+|+++|.+
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~ 82 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPN 82 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCG
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCc
Confidence 58999999 7899999999998898755 57888765422211 122 346788887 568999998876
No 492
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=92.90 E-value=0.13 Score=56.04 Aligned_cols=65 Identities=12% Similarity=0.128 Sum_probs=47.4
Q ss_pred cEEEEEecChhHHHHHHHHHhCC---CEEEEEecCCccHHHHhh---c----Cce--------ecCHHHHhcc--CcEEE
Q psy7896 349 KVAVVAGYGDVGKGCAQSLRLFG---SRVIVTEIDPINALQASM---E----GYE--------VTTMEEAAKE--GGIFV 408 (718)
Q Consensus 349 ktVGIIG~G~IG~~vA~~l~~fG---a~Viv~d~dp~~al~a~~---~----G~~--------v~~Leell~~--aDiIi 408 (718)
++|+|+|.|.||+.+++.|...| .+|+++++++.+...... . .+. ..++++++++ .|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 58999999999999999999888 499999988765322111 0 121 1235677777 89999
Q ss_pred EcCCC
Q psy7896 409 TTTGC 413 (718)
Q Consensus 409 ~atgt 413 (718)
.+++.
T Consensus 82 n~ag~ 86 (405)
T 4ina_A 82 NIALP 86 (405)
T ss_dssp ECSCG
T ss_pred ECCCc
Confidence 88764
No 493
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=92.82 E-value=1.7 Score=46.03 Aligned_cols=162 Identities=14% Similarity=0.170 Sum_probs=104.8
Q ss_pred ccccCcEEEEEecChhHHH---HHHHHHhCCCEEEEEecCCccHHHHhhcCceecCHHHH----hccCcEEEEcCCCCCC
Q psy7896 344 IMLAGKVAVVAGYGDVGKG---CAQSLRLFGSRVIVTEIDPINALQASMEGYEVTTMEEA----AKEGGIFVTTTGCKDI 416 (718)
Q Consensus 344 ~eL~GktVGIIG~G~IG~~---vA~~l~~fGa~Viv~d~dp~~al~a~~~G~~v~~Leel----l~~aDiIi~atgt~~l 416 (718)
..|+||+++.+=+-+--+. +-.-++.+|++|+..+......+ ..| .++.+- -+-+|+|+.-+...+.
T Consensus 40 ~~L~gk~l~~lF~e~STRTR~SFe~A~~~LGg~~i~l~~~~~s~~---~kg---Esl~DTarvls~~~D~iviR~~~~~~ 113 (308)
T 1ml4_A 40 EYAKGKILATLFFEPSTRTRLSFESAMHRLGGAVIGFAEASTSSV---KKG---ESLRDTIKTVEQYCDVIVIRHPKEGA 113 (308)
T ss_dssp CTTTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEESCGGGSGG---GGT---CCHHHHHHHHTTTCSEEEEEESSTTH
T ss_pred cccCCCEEEEEecCCCchHHHHHHHHHHHhCCeEEEeCCCccccc---cCC---CCHHHHHHHHHHhCcEEEEecCChhH
Confidence 3489999999999875443 33445789999999853321111 122 133332 2458988875443332
Q ss_pred cCHHHHhcCCCCeEEEEcCCCCccccHHHHhccccceeeecCCcccCccccchhhHHHHhhhcccccccccccccCCccc
Q psy7896 417 IRGEHFLQMRDDAIVCNIGHFDCEIQVSWLDKNAVEKVNVKPQVSPTSRTKHLTTEALLATCNSLFKYSLVNTIHEAPTL 496 (718)
Q Consensus 417 I~~e~l~~MK~gAiLIN~GRgd~Eid~~aL~~~~l~~~~v~P~V~v~s~e~~~~~eal~n~~~~~~~~nlv~~~h~~a~~ 496 (718)
+ +.++.- .+.=+||.|-|+.+=..++|.+
T Consensus 114 ~--~~la~~-~~vPVINag~g~~~HPtQ~LaD------------------------------------------------ 142 (308)
T 1ml4_A 114 A--RLAAEV-AEVPVINAGDGSNQHPTQTLLD------------------------------------------------ 142 (308)
T ss_dssp H--HHHHHT-CSSCEEEEEETTSCCHHHHHHH------------------------------------------------
T ss_pred H--HHHHHh-CCCCEEeCccCCccCcHHHHHH------------------------------------------------
Confidence 2 223321 2345778776643333344433
Q ss_pred ccccccchhhcccchhhhHHHHhcChHHHHHHHHhcccccCCceEEEeeecch--hhHHHHHHHHHHcCCeEEeeccCcC
Q psy7896 497 LVHLSTDIKLAEWGRKTIIMAENEMPGLMALRRKYGAQKILKGARIAGCLHMT--VQTAVLIETLLELGAEVQWSSCNIF 574 (718)
Q Consensus 497 ~~Y~i~D~~La~~G~~kI~wa~~~MP~L~~Lr~~f~~~kpl~G~~i~~~lh~~--~~Ta~L~~~l~~~GA~v~~~~~npl 574 (718)
+..|+++| .+|+|++|++++.+. --.-.|+..+..+|++|++++-.-|
T Consensus 143 ---------------------------l~Ti~e~~---g~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~ 192 (308)
T 1ml4_A 143 ---------------------------LYTIKKEF---GRIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELL 192 (308)
T ss_dssp ---------------------------HHHHHHHS---SCSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGG
T ss_pred ---------------------------HHHHHHHh---CCCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccc
Confidence 35667766 469999999999983 4556788999999999999999888
Q ss_pred CchHHHHHHHHhcCceEE
Q psy7896 575 STQDHAAAAIAARGVAVY 592 (718)
Q Consensus 575 stqd~vaaal~~~gi~v~ 592 (718)
.-.+++.+.+.+.|.++.
T Consensus 193 ~~~~~~~~~~~~~g~~~~ 210 (308)
T 1ml4_A 193 RMPRHIVEELREKGMKVV 210 (308)
T ss_dssp CCCHHHHHHHHHTTCCEE
T ss_pred cCCHHHHHHHHHcCCeEE
Confidence 888878777667776643
No 494
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=92.80 E-value=0.31 Score=49.31 Aligned_cols=41 Identities=37% Similarity=0.597 Sum_probs=35.0
Q ss_pred hhcccccCcEEEEEecC-hhHHHHHHHHHhCCCEEEEEecCC
Q psy7896 341 YLDIMLAGKVAVVAGYG-DVGKGCAQSLRLFGSRVIVTEIDP 381 (718)
Q Consensus 341 ~~g~eL~GktVGIIG~G-~IG~~vA~~l~~fGa~Viv~d~dp 381 (718)
+....+.||++.|.|.+ .||+++|+.|...|++|++.+.+.
T Consensus 11 ~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~ 52 (270)
T 3is3_A 11 YIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANS 52 (270)
T ss_dssp CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 34567899999999976 599999999999999999976554
No 495
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=92.78 E-value=0.14 Score=54.22 Aligned_cols=65 Identities=11% Similarity=0.110 Sum_probs=45.1
Q ss_pred cEEEEEecChhHH-HHHHHHHhC-CCEEE-EEecCCccHHHHhh--cCce-ecCHHHHhcc--CcEEEEcCCC
Q psy7896 349 KVAVVAGYGDVGK-GCAQSLRLF-GSRVI-VTEIDPINALQASM--EGYE-VTTMEEAAKE--GGIFVTTTGC 413 (718)
Q Consensus 349 ktVGIIG~G~IG~-~vA~~l~~f-Ga~Vi-v~d~dp~~al~a~~--~G~~-v~~Leell~~--aDiIi~atgt 413 (718)
.+|||||+|.||+ ..+..++.. +++|. ++|++......... .+.. +.++++++.+ .|+|+++|.+
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 75 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPA 75 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCG
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCc
Confidence 4799999999999 567767665 77765 67776222221111 3443 5689999975 8999998776
No 496
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=92.77 E-value=0.15 Score=56.64 Aligned_cols=64 Identities=20% Similarity=0.258 Sum_probs=45.6
Q ss_pred cCcEEEEEecChh--HHHHHHHHHh----CCCEEEEEecCCccHH--HHhhc-------Cce-ecCHHHHhccCcEEEEc
Q psy7896 347 AGKVAVVAGYGDV--GKGCAQSLRL----FGSRVIVTEIDPINAL--QASME-------GYE-VTTMEEAAKEGGIFVTT 410 (718)
Q Consensus 347 ~GktVGIIG~G~I--G~~vA~~l~~----fGa~Viv~d~dp~~al--~a~~~-------G~~-v~~Leell~~aDiIi~a 410 (718)
+.++|+|||.|.+ |..+++.+.. .| +|.++|+++.+.. ....+ .+. ..+++++++.||+|+.+
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 5679999999997 5788877653 46 9999999885421 11110 122 25799999999999986
Q ss_pred C
Q psy7896 411 T 411 (718)
Q Consensus 411 t 411 (718)
.
T Consensus 83 i 83 (450)
T 3fef_A 83 I 83 (450)
T ss_dssp C
T ss_pred c
Confidence 4
No 497
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=92.75 E-value=0.15 Score=55.85 Aligned_cols=81 Identities=10% Similarity=0.082 Sum_probs=54.8
Q ss_pred CcEEEEEecChhHHHHHHHHHhC-CCEEE-EEecCCccHHHHh----hcC---ce-ec----CHHHHhc--cCcEEEEcC
Q psy7896 348 GKVAVVAGYGDVGKGCAQSLRLF-GSRVI-VTEIDPINALQAS----MEG---YE-VT----TMEEAAK--EGGIFVTTT 411 (718)
Q Consensus 348 GktVGIIG~G~IG~~vA~~l~~f-Ga~Vi-v~d~dp~~al~a~----~~G---~~-v~----~Leell~--~aDiIi~at 411 (718)
-.+|||||+|.||+..++.+... |++|. ++|+++.+..... ..| .. +. +++++++ +.|+|++++
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~t 99 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSS 99 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECC
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcC
Confidence 35899999999999999988875 67754 6888876543321 124 22 45 8999997 589999987
Q ss_pred CCCCCcCHHHHhcCCCCe
Q psy7896 412 GCKDIIRGEHFLQMRDDA 429 (718)
Q Consensus 412 gt~~lI~~e~l~~MK~gA 429 (718)
.+. .--.-.+..|+.|.
T Consensus 100 p~~-~h~~~~~~al~aGk 116 (444)
T 2ixa_A 100 PWE-WHHEHGVAAMKAGK 116 (444)
T ss_dssp CGG-GHHHHHHHHHHTTC
T ss_pred CcH-HHHHHHHHHHHCCC
Confidence 653 11122234566665
No 498
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=92.72 E-value=0.24 Score=50.41 Aligned_cols=39 Identities=38% Similarity=0.543 Sum_probs=34.0
Q ss_pred ccccCcEEEEEecC-hhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 344 IMLAGKVAVVAGYG-DVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 344 ~eL~GktVGIIG~G-~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
..+.||++.|.|.+ .||+++|+.|...|++|++.++++.
T Consensus 25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 64 (283)
T 1g0o_A 25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANST 64 (283)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 45789999999864 5999999999999999999987764
No 499
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.72 E-value=0.19 Score=50.72 Aligned_cols=36 Identities=28% Similarity=0.352 Sum_probs=32.8
Q ss_pred cccCcEEEEEecC-hhHHHHHHHHHhCCCEEEEEecC
Q psy7896 345 MLAGKVAVVAGYG-DVGKGCAQSLRLFGSRVIVTEID 380 (718)
Q Consensus 345 eL~GktVGIIG~G-~IG~~vA~~l~~fGa~Viv~d~d 380 (718)
.+.||++.|.|.+ .||+++|+.|...|++|++++++
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 5789999999975 59999999999999999999876
No 500
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=92.68 E-value=0.093 Score=49.15 Aligned_cols=33 Identities=24% Similarity=0.241 Sum_probs=30.4
Q ss_pred EEEEEecChhHHHHHHHHHhCCCEEEEEecCCc
Q psy7896 350 VAVVAGYGDVGKGCAQSLRLFGSRVIVTEIDPI 382 (718)
Q Consensus 350 tVGIIG~G~IG~~vA~~l~~fGa~Viv~d~dp~ 382 (718)
.|.|||.|..|..+|..|+..|.+|+++|..+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 499999999999999999999999999997653
Done!