BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy790
(72 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 90.5 bits (223), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Query: 1 MSEAAGGVPIYIPLQDTSPAEPGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGK 60
M AG VP++IPL+ + P + G +S+D+ DP ELESKFSS+TK IILNTPHNPLGK
Sbjct: 125 MVRMAGAVPVFIPLR-SKPTD-GMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGK 182
Query: 61 VFTREELEVIA 71
V+TR+EL+VIA
Sbjct: 183 VYTRQELQVIA 193
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 90.5 bits (223), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Query: 1 MSEAAGGVPIYIPLQDTSPAEPGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGK 60
M AG VP++IPL+ + P + G +S+D+ DP ELESKFSS+TK IILNTPHNPLGK
Sbjct: 125 MVRMAGAVPVFIPLR-SKPTD-GMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGK 182
Query: 61 VFTREELEVIA 71
V+TR+EL+VIA
Sbjct: 183 VYTRQELQVIA 193
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 81.3 bits (199), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/71 (53%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 1 MSEAAGGVPIYIPLQDTSPAEPGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGK 60
M+ AGG P+++ L+ P + G SS++++LDP EL KF+SRTK ++LNTP+NPLGK
Sbjct: 131 MTMMAGGRPVFVSLK-PGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGK 189
Query: 61 VFTREELEVIA 71
VF+REELE++A
Sbjct: 190 VFSREELELVA 200
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 81.3 bits (199), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/71 (53%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 1 MSEAAGGVPIYIPLQDTSPAEPGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGK 60
M+ AGG P+++ L+ P + G SS++++LDP EL KF+SRTK ++LNTP+NPLGK
Sbjct: 131 MTMMAGGRPVFVSLK-PGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGK 189
Query: 61 VFTREELEVIA 71
VF+REELE++A
Sbjct: 190 VFSREELELVA 200
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 81.3 bits (199), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/71 (53%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 1 MSEAAGGVPIYIPLQDTSPAEPGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGK 60
M+ AGG P+++ L+ P + G SS++++LDP EL KF+SRTK ++LNTP+NPLGK
Sbjct: 131 MTMMAGGRPVFVSLK-PGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGK 189
Query: 61 VFTREELEVIA 71
VF+REELE++A
Sbjct: 190 VFSREELELVA 200
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 80.1 bits (196), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
Query: 1 MSEAAGGVPIYIPLQDTSPAEPGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGK 60
M +AAGG+P +IPL+ P + G SSAD+ LD ELE+ F+ +TK+II+NTPHNPLGK
Sbjct: 141 MVKAAGGIPRFIPLK---PNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGK 197
Query: 61 VFTREELEVIA 71
V R ELEV+A
Sbjct: 198 VMDRAELEVVA 208
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 80.1 bits (196), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
Query: 1 MSEAAGGVPIYIPLQDTSPAEPGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGK 60
M +AAGG+P +IPL+ P + G SSAD+ LD ELE+ F+ +TK+II+NTPHNPLGK
Sbjct: 141 MVKAAGGIPRFIPLK---PNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGK 197
Query: 61 VFTREELEVIA 71
V R ELEV+A
Sbjct: 198 VMDRAELEVVA 208
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 3 EAAGGVPIYIPLQDTSPAE-PGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGKV 61
E GG +Y+P+ P E R+ ++ +D + E +S+TK +I+NTPHNP+GKV
Sbjct: 160 ELCGGKVVYVPIN--PPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKV 217
Query: 62 FTREELEVIAK 72
FTREEL +
Sbjct: 218 FTREELTTLGN 228
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 31 FKLDPAELESKFSSRTKLIILNTPHNPLGKVFTREELEVIAK 72
F+LD + LE + RT+ ++LNTP NP G VF ELE IA+
Sbjct: 138 FRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIAR 179
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 31 FKLDPAELESKFSSRTKLIILNTPHNPLGKVFTREELEVIAK 72
FK+ P ++ + +TKL++ NTP NP G V+T +E+ IA+
Sbjct: 149 FKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQ 190
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 5 AGGVPIYIPLQDTSPAEPGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGKVFTR 64
AGG P+ +P + +F+L+ EL+ + +T+ +I+N+P NP G V T+
Sbjct: 131 AGGKPVEVPTYEED-----------EFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTK 179
Query: 65 EELEVIA 71
++LE IA
Sbjct: 180 KDLEEIA 186
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 5 AGGVPIYIPLQDTSPAEPGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGKVFTR 64
AGG P+ +P + +F+L+ EL+ + +T+ +I+N+P NP G V T+
Sbjct: 130 AGGKPVEVPTYEED-----------EFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTK 178
Query: 65 EELEVIA 71
++LE IA
Sbjct: 179 KDLEEIA 185
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 40.4 bits (93), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 25 HKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGKVFTREEL 67
K + + +D LE +F KL +L +PHNP+G+V+ +EEL
Sbjct: 136 QKQNDTYAIDFEHLEKQFQQGVKLXLLCSPHNPIGRVWKKEEL 178
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 1 MSEAAGGVPIYIPLQDTSPAEPGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGK 60
M AGGV + + +T P E F DP + + RTK +++N+P+NP G
Sbjct: 131 MVRFAGGVVVEV---ETLPEE--------GFVPDPERVRRAITPRTKALVVNSPNNPTGA 179
Query: 61 VFTREELEVIAK 72
V+ +E LE +A+
Sbjct: 180 VYPKEVLEALAR 191
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 1 MSEAAGGVPIYIPLQDTSPAEPGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGK 60
M AGGV + + +T P E F DP + + RTK +++N+P+NP G
Sbjct: 131 MVRFAGGVVVEV---ETLPEE--------GFVPDPERVRRAITPRTKALVVNSPNNPTGA 179
Query: 61 VFTREELEVIAK 72
V+ +E LE +A+
Sbjct: 180 VYPKEVLEALAR 191
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 1 MSEAAGGVPIYIPLQDTSPAEPGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGK 60
M AGGV + + +T P E F DP + + RTK +++N+P+NP G
Sbjct: 131 MVRFAGGVVVEV---ETLPEE--------GFVPDPERVRRAITPRTKALVVNSPNNPTGA 179
Query: 61 VFTREELEVIAK 72
V+ +E LE +A+
Sbjct: 180 VYPKEVLEALAR 191
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 1 MSEAAGGVPIYIPLQDTSPAEPGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGK 60
M AGGV + + +T P E F DP + + RTK +++N+P+NP G
Sbjct: 131 MVRFAGGVVVEV---ETLPEE--------GFVPDPERVRRAITPRTKALVVNSPNNPTGA 179
Query: 61 VFTREELEVIAK 72
V+ +E LE +A+
Sbjct: 180 VYPKEVLEALAR 191
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 1 MSEAAGGVPIYIPLQDTSPAEPGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGK 60
M AGGV + + +T P E F DP + + RTK +++N+P+NP G
Sbjct: 131 MVRFAGGVVVEV---ETLPEE--------GFVPDPERVRRAITPRTKALVVNSPNNPTGA 179
Query: 61 VFTREELEVIAK 72
V+ +E LE +A+
Sbjct: 180 VYPKEVLEALAR 191
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 1 MSEAAGGVPIYIPLQDTSPAEPGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGK 60
M AGGV + + +T P E F DP + + RTK +++N+P+NP G
Sbjct: 131 MVRFAGGVVVEV---ETLPEE--------GFVPDPERVRRAITPRTKALVVNSPNNPTGA 179
Query: 61 VFTREELEVIAK 72
V+ +E LE +A+
Sbjct: 180 VYPKEVLEALAR 191
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 38.9 bits (89), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 31 FKLDPAELESKFSSRTKLIILNTPHNPLGKVFTREELEVI 70
F++D E + S RT+L+ILNTPHNP V+ + + +
Sbjct: 149 FRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAAL 188
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 9 PIYIPLQDTSP-------AEPGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGKV 61
P+Y P P + + ++ +D ++E+K KL IL PHNP+G+V
Sbjct: 122 PVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRV 180
Query: 62 FTREELE 68
+T++EL+
Sbjct: 181 WTKDELK 187
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 29 ADFKLDPAELESKFSSRTKLIILNTPHNPLGKVFTREELE 68
DF ++ LE S +TK II+N+P NPLG+V RE E
Sbjct: 140 CDFTVES--LEEALSDKTKAIIINSPSNPLGEVIDREIYE 177
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 36.6 bits (83), Expect = 0.003, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 31 FKLDPAELESKFSSRTKLIILNTPHNPLGKVFTREEL 67
F LD L + RT+ +I+N+PHNP G V + EL
Sbjct: 146 FALDADALRRAVTPRTRALIINSPHNPTGAVLSATEL 182
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 35.8 bits (81), Expect = 0.006, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 2 SEAAGGVPIYIPLQDT-SPAEPGRHKSSADFKL---------DPAELESKFSS-RTKLII 50
SE GV I+ P D A G ++ L D +LE+ + K+++
Sbjct: 108 SETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIML 167
Query: 51 LNTPHNPLGKVFTREELEVIA 71
L +P NP GKV+T +ELE++A
Sbjct: 168 LCSPQNPTGKVWTCDELEIMA 188
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 35.8 bits (81), Expect = 0.006, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 29/41 (70%)
Query: 31 FKLDPAELESKFSSRTKLIILNTPHNPLGKVFTREELEVIA 71
F++D LE + ++ T+ +I+N+P+NP G V++ E ++ ++
Sbjct: 158 FQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLS 198
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 28 SADFKLDPAELESKFSSRTKLIILNTPHNPLGKVFTREELEVIAK 72
S +F+ E+E +TK +++N+P+NP G V+ RE LE + +
Sbjct: 157 SKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVR 201
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 35.0 bits (79), Expect = 0.011, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 31 FKLDPAELESKFSSRTKLIILNTPHNPLGKVFTREELEVI 70
+++D +LES +T +++N P NP G VF++ L+ I
Sbjct: 154 WEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKI 193
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 30 DFKLDPAELESKFSSRTKLIILNTPHNPLGKVFTREELEVIAK 72
D++ D E+ +TKL+I+ P NP G F+R+ +E I +
Sbjct: 162 DWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVR 204
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 33.9 bits (76), Expect = 0.025, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 31 FKLDPAELESKF-SSRTKLIILNTPHNPLGKVFTREELEVIA 71
F++D +LE+ + KL +L PHNP G+V+ RE LE I
Sbjct: 149 FQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIG 190
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 33.5 bits (75), Expect = 0.029, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 31 FKLDPAELESKFSSRTKLIILNTPHNPLGKVFTREELEVI 70
+++D +LE +T +I+N P NP G VF++ L+ I
Sbjct: 177 WEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKI 216
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 35 PAELESKFSSRTKLIILNTPHNPLGKVFTREE 66
P LES + RTK I+L+ P NP G V+ ++E
Sbjct: 164 PQNLESFINERTKGIVLSNPCNPTGVVYGKDE 195
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 32.7 bits (73), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 33 LDPAELESKFSSRTKLIILNTPHNPLGKVFTREELEVIA 71
LD LE F + ++ + + P+NP G V++ EE+ IA
Sbjct: 167 LDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIA 205
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 32.7 bits (73), Expect = 0.059, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 9 PIYIP------LQDTSPAEPGRHKSSADFKLDPAELESKF-SSRTKLIILNTPHNPLGKV 61
P+Y P L D E + F++D +LE + K+ +L +PHNP G+V
Sbjct: 151 PVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRV 210
Query: 62 FTREELEVIAK 72
+ ++L IA+
Sbjct: 211 WDNDDLIKIAE 221
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 34 DPAELESKFSSRTKLIILNTPHNPLGKVFTREEL-EVIAK 72
D ++++S+ +TKLI L P+NP G T+E E IAK
Sbjct: 170 DWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAK 209
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 30 DFKLDPAELESKFSSRTKLIILNTPHNPLGKVFTREELEVI 70
D++ D ++ K + RTK I + P+NP G ++ ++ LE I
Sbjct: 159 DWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEI 199
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 30.8 bits (68), Expect = 0.18, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 27 SSADFKLDPAELESKFSS------RTKLIILNTPHNPLGKVFTREELEVI 70
SS F++ LE + R K +++ P NPLG TR EL ++
Sbjct: 167 SSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLL 216
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 30.8 bits (68), Expect = 0.20, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 27 SSADFKLDPAELESKFSS------RTKLIILNTPHNPLGKVFTREELEVI 70
SS F++ LE + R K +++ P NPLG TR EL ++
Sbjct: 150 SSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLL 199
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 30.8 bits (68), Expect = 0.20, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 27 SSADFKLDPAELESKFSS------RTKLIILNTPHNPLGKVFTREELEVI 70
SS F++ LE + R K +++ P NPLG TR EL ++
Sbjct: 165 SSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLL 214
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 30.8 bits (68), Expect = 0.23, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 27 SSADFKLDPAELESKFSS------RTKLIILNTPHNPLGKVFTREELEVI 70
SS F++ LE + R K +++ P NPLG TR EL ++
Sbjct: 167 SSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLL 216
>pdb|3E6G|A Chain A, Crystal Structure Of Xometc, A Cystathionine C-Lyase-Like
Protein From Xanthomonas Oryzae Pv.Oryzae
pdb|3E6G|B Chain B, Crystal Structure Of Xometc, A Cystathionine C-Lyase-Like
Protein From Xanthomonas Oryzae Pv.Oryzae
pdb|3E6G|C Chain C, Crystal Structure Of Xometc, A Cystathionine C-Lyase-Like
Protein From Xanthomonas Oryzae Pv.Oryzae
pdb|3E6G|D Chain D, Crystal Structure Of Xometc, A Cystathionine C-Lyase-Like
Protein From Xanthomonas Oryzae Pv.Oryzae
pdb|3NNP|A Chain A, Native Structure Of Xometc, A Cystathionine C-Lyase
Protein From Xanthomonas Oryzae Pv.Oryzae, At Ph 5.2
pdb|3NNP|B Chain B, Native Structure Of Xometc, A Cystathionine C-Lyase
Protein From Xanthomonas Oryzae Pv.Oryzae, At Ph 5.2
pdb|3NMY|A Chain A, Native Structure Of Xometc At Ph 9.0
pdb|3NMY|B Chain B, Native Structure Of Xometc At Ph 9.0
pdb|3NMY|C Chain C, Native Structure Of Xometc At Ph 9.0
pdb|3NMY|D Chain D, Native Structure Of Xometc At Ph 9.0
Length = 400
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 24 RHKSSADFKL----DPAELESKFSSRTKLIILNTPHNPLGKVFTREELEVIAK 72
R + DF DPA ++ + TK++ + TP NP+ K+ + VIA+
Sbjct: 127 RRTAGLDFSFVDLTDPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIAR 179
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 30.4 bits (67), Expect = 0.25, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 28 SADFKLDPAELESKFSSRT-KLIILNTPHNPLGKVFTREELEVIAK 72
++ + ++ A+LE K ++ + + + PHNP+G ++ EE++ IA+
Sbjct: 142 NSKYSVNWADLEEKLATPSVRXXVFCNPHNPIGYAWSEEEVKRIAE 187
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 30.0 bits (66), Expect = 0.33, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 9 PIYIPL------QDTSPAEPGRHKSSADFKLDPAELESKFSSRT-KLIILNTPHNPLGKV 61
P+Y P Q+ E + + +D +LE + K ++ +PHNP+G+V
Sbjct: 121 PVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRV 180
Query: 62 FTREELEVI 70
+ ++EL+ I
Sbjct: 181 WKKDELQKI 189
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 28.9 bits (63), Expect = 0.69, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 37 ELESKFSSRTKLIILNTPHNPLGKVFTREEL 67
++E F + + I+L P+NPLG VF E L
Sbjct: 142 DVEKGFQAGARSILLCNPYNPLGXVFAPEWL 172
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 28.9 bits (63), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 48 LIILNTPHNPLGKVFTREELEVIAK 72
++ + P+NP G VF REE+E I K
Sbjct: 141 VVFIPNPNNPTGHVFEREEIERILK 165
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 28.9 bits (63), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 48 LIILNTPHNPLGKVFTREELEVIAK 72
++ + P+NP G VF REE+E I K
Sbjct: 153 VVFIPNPNNPTGHVFEREEIERILK 177
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 28.9 bits (63), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 48 LIILNTPHNPLGKVFTREELEVIAK 72
++ + P+NP G VF REE+E I K
Sbjct: 141 VVFIPNPNNPTGHVFEREEIERILK 165
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 28.9 bits (63), Expect = 0.80, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Query: 9 PIYIP------LQDTSPAEPGRHK-SSADFKLDPAELESKFSSRTKLIILNTPHNPLGKV 61
PI+ P L+D E H D++++P E+E K +I+ P NP K
Sbjct: 201 PIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKE 260
Query: 62 FTREELEVIAK 72
F L I +
Sbjct: 261 FDTNALNAIKQ 271
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 48 LIILNTPHNPLGKVFTREEL 67
L+ILN+P+NP G+ + EEL
Sbjct: 157 LVILNSPNNPTGRTLSLEEL 176
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 29 ADFKLD-PAELESKFSSRTKLIILNTPHNPLGKVFTREELEVI 70
ADF++D LE + + ++ + TP+NP G V + +++E I
Sbjct: 147 ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERI 189
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 29 ADFKLD-PAELESKFSSRTKLIILNTPHNPLGKVFTREELEVI 70
ADF++D LE + + ++ + TP+NP G V + +++E I
Sbjct: 147 ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERI 189
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 29 ADFKLD-PAELESKFSSRTKLIILNTPHNPLGKVFTREELEVI 70
ADF++D LE + + ++ + TP+NP G V + +++E I
Sbjct: 144 ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERI 186
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 45 RTKLIILNTPHNPLGKVFTREEL 67
RT +I +P+NP G TRE+L
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQL 220
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 45 RTKLIILNTPHNPLGKVFTREEL 67
RT +I +P+NP G TRE+L
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQL 220
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 45 RTKLIILNTPHNPLGKVFTREEL 67
RT +I +P+NP G TRE+L
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQL 220
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 45 RTKLIILNTPHNPLGKVFTREEL 67
RT +I +P+NP G TRE+L
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQL 220
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 22 PGRHKSSADFKLDPAELESKFSS------RTKLIILNTPHNPLGKVFTREELEVI 70
P +SS +FK+ ++ + + + K +IL P NPLG ++ L+ +
Sbjct: 159 PIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSV 213
>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
pdb|3EUC|B Chain B, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
Length = 367
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 29 ADFKLDP-AELESKFSSRTKLIILNTPHNPLGKVFTREELEVIAK 72
ADF LD A L + + ++ L P+NP G +F + E I +
Sbjct: 140 ADFTLDRGAXLAAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVR 184
>pdb|2NMP|A Chain A, Crystal Structure Of Human Cystathionine Gamma Lyase
pdb|2NMP|B Chain B, Crystal Structure Of Human Cystathionine Gamma Lyase
pdb|2NMP|C Chain C, Crystal Structure Of Human Cystathionine Gamma Lyase
pdb|2NMP|D Chain D, Crystal Structure Of Human Cystathionine Gamma Lyase
pdb|3COG|A Chain A, Crystal Structure Of Human Cystathionase (Cystathionine
Gamma Lyase) In Complex With Dl-Propargylglycine
pdb|3COG|B Chain B, Crystal Structure Of Human Cystathionase (Cystathionine
Gamma Lyase) In Complex With Dl-Propargylglycine
pdb|3COG|C Chain C, Crystal Structure Of Human Cystathionase (Cystathionine
Gamma Lyase) In Complex With Dl-Propargylglycine
pdb|3COG|D Chain D, Crystal Structure Of Human Cystathionase (Cystathionine
Gamma Lyase) In Complex With Dl-Propargylglycine
Length = 403
Score = 26.2 bits (56), Expect = 5.4, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 38 LESKFSSRTKLIILNTPHNPLGKVFTRE 65
LE+ + TKL+ + TP NP KV E
Sbjct: 144 LEAAITPETKLVWIETPTNPTQKVIDIE 171
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 25.8 bits (55), Expect = 6.5, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 34 DPAELESKFSSRTKLIILNTPHNPLGKVFTREELEVI 70
DPA L+ + +R L PH LG+ R EL+++
Sbjct: 333 DPAVLDVERGARHHLAFGFGPHQCLGQNLARMELQIV 369
>pdb|4DWP|A Chain A, Semet Protelomerase Tela Covalently Complexed With
Substrate Dna
Length = 462
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 7 GVPIYIPL---QDTSPAEPGRHKSSADFKLDPAELESKFSSRTKLIILNTPHNPLGKVFT 63
G+ IP+ +T A R + S KL FSS T+L++ +T N V+
Sbjct: 316 GITYEIPVLTRSETVLAAYKRLRESGQGKLWHGXSIDDFSSETRLLLRDTVFNLFEDVWP 375
Query: 64 REEL 67
+EEL
Sbjct: 376 KEEL 379
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.312 0.131 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,113,976
Number of Sequences: 62578
Number of extensions: 65599
Number of successful extensions: 219
Number of sequences better than 100.0: 63
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 159
Number of HSP's gapped (non-prelim): 63
length of query: 72
length of database: 14,973,337
effective HSP length: 42
effective length of query: 30
effective length of database: 12,345,061
effective search space: 370351830
effective search space used: 370351830
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 45 (21.9 bits)