Query psy7902
Match_columns 342
No_of_seqs 153 out of 1136
Neff 9.1
Searched_HMMs 46136
Date Fri Aug 16 21:47:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7902.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7902hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG4826 Serine protease inhibi 100.0 4.5E-72 9.7E-77 482.9 21.2 328 1-339 44-408 (410)
2 cd02054 angiotensinogen Angiot 100.0 2.1E-69 4.5E-74 506.9 36.3 320 1-337 8-372 (372)
3 cd02048 neuroserpin Neuroserpi 100.0 5.9E-70 1.3E-74 514.6 31.4 330 1-341 6-379 (388)
4 cd02044 ov-serpin ovalbumin fa 100.0 2E-69 4.3E-74 508.7 34.5 323 1-337 7-370 (370)
5 KOG2392|consensus 100.0 4.4E-69 9.6E-74 503.6 34.4 328 1-337 13-380 (380)
6 cd02059 ovalbumin_like The ova 100.0 1.5E-68 3.3E-73 505.4 35.2 329 1-337 7-389 (389)
7 cd02057 maspin_like Maspin (ma 100.0 6.4E-69 1.4E-73 504.9 31.7 324 1-337 7-372 (372)
8 cd02045 antithrombin-III_like 100.0 1.5E-68 3.2E-73 503.3 32.0 326 1-334 11-381 (381)
9 cd02047 HCII Heparin cofactor 100.0 1.3E-67 2.7E-72 502.1 35.7 323 1-338 71-436 (436)
10 smart00093 SERPIN SERine Prot 100.0 1.3E-67 2.7E-72 494.9 34.9 319 4-337 1-359 (359)
11 cd02058 PAI-2 Plasminogen Acti 100.0 5.2E-68 1.1E-72 500.8 32.2 331 1-337 7-380 (380)
12 cd02046 hsp47 Heat shock prote 100.0 1.2E-67 2.7E-72 494.2 33.5 318 1-334 9-366 (366)
13 cd00172 SERPIN SERine Proteina 100.0 2.1E-67 4.6E-72 494.5 35.2 323 1-334 4-364 (364)
14 cd02056 alpha-1-antitrypsin_li 100.0 2.8E-67 6.1E-72 492.7 34.6 319 1-334 4-361 (361)
15 PF00079 Serpin: Serpin (serin 100.0 1.1E-66 2.4E-71 491.2 36.1 325 1-337 5-371 (371)
16 cd02049 bacterial_SERPIN SERin 100.0 7.3E-67 1.6E-71 490.2 34.4 321 1-334 7-364 (364)
17 cd02051 PAI-1_nexin-1 Plasmino 100.0 5.3E-67 1.1E-71 492.7 33.0 322 1-337 13-377 (377)
18 cd02052 PEDF Pigment epitheliu 100.0 1.1E-66 2.5E-71 489.1 30.8 316 1-337 21-374 (374)
19 cd02043 plant_SERPIN SERine Pr 100.0 2.8E-66 6E-71 488.7 32.9 328 1-337 5-381 (381)
20 cd02055 PZI Protein Z-dependen 100.0 5.6E-65 1.2E-69 476.2 29.5 315 1-334 8-365 (365)
21 PHA02948 serine protease inhib 100.0 1.7E-64 3.7E-69 472.4 29.7 313 1-337 23-373 (373)
22 cd02053 alpha2AP Alpha2-antipl 100.0 4.5E-64 9.8E-69 468.5 30.0 306 1-334 7-351 (351)
23 cd02050 C1_inh C1 inhibitor (C 100.0 2E-63 4.3E-68 464.3 27.9 307 1-334 4-352 (352)
24 PHA02660 serpin-like protein; 100.0 7E-61 1.5E-65 447.1 24.1 299 1-337 17-364 (364)
25 PTZ00100 DnaJ chaperone protei 58.8 50 0.0011 25.5 6.5 67 4-73 21-93 (116)
26 PF01666 DX: DX module; Inter 31.9 57 0.0012 23.1 2.9 25 312-336 14-38 (76)
27 KOG0572|consensus 28.2 75 0.0016 30.0 3.7 30 308-339 171-200 (474)
28 PF07037 DUF1323: Putative tra 22.2 50 0.0011 25.5 1.2 11 121-131 13-24 (122)
No 1
>COG4826 Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.5e-72 Score=482.87 Aligned_cols=328 Identities=30% Similarity=0.519 Sum_probs=294.4
Q ss_pred ChHHHHHHHHhhcC-CCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCCChHHHHHHhhHHHHHHHhhhCCCC
Q psy7902 1 EFTFDLLTVLNNAN-KGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGLRANADS 79 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~-~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 79 (342)
.||++||..+.+.. ..+|+.|||+||+.++||-|.||.|.|++||..+++++. ++..+...++ .+...+.+++.+
T Consensus 44 aF~FdlyS~~~~~~~~~~Ni~fSPySV~~AmAmcY~GaeGsTkeqmsnvfyfp~--n~~vl~~~~~--~~nd~i~sp~~~ 119 (410)
T COG4826 44 AFAFDLYSELAKQEGEAENILFSPYSVSAAMAMCYEGAEGSTKEQMSNVFYFPI--NKTVLKVREK--SLNDKINSPNDS 119 (410)
T ss_pred chhHHHHHHHHhhcccccceeeccHHHHHHHHHHhcccCcchHHHHHhheeccc--cchHhhhhHH--hhcccccCCccc
Confidence 49999999999744 679999999999999999999999999999999999995 4556666664 555556666667
Q ss_pred ceEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceEEE-
Q psy7902 80 GLTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL- 153 (342)
Q Consensus 80 ~~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~lvl- 153 (342)
++|..+|++|+++++++++.|.. +|.+++..+||.++|+.++. ||+|++++|+|+|+++++++.+.++++++|
T Consensus 120 -y~le~AnalWvqedyplke~yv~n~r~yy~aevtnlDF~~~p~~s~dtINkWvEekT~gkIkdlVp~~~i~~d~rlvlt 198 (410)
T COG4826 120 -YELETANALWVQEDYPLKENYVNNVRNYYDAEVTNLDFVNKPDASRDTINKWVEEKTNGKIKDLVPEDYIGPDTRLVLT 198 (410)
T ss_pred -hhhhhhhhHHHhcCCCCCHHHHHHHHhhhhcceeecccccCchHHHHHHHHHHHHhhcchHhhcCCccccCCceeEEEE
Confidence 99999999999999999999964 88899999999999999999 999999999999999999999999999998
Q ss_pred --------ecc---------------CCceEEec------ceeecCCCCeEEEEeecCCCceEEEEEeCCCCCCCcHHHH
Q psy7902 154 --------WLP---------------STQESIII------ITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGDI 204 (342)
Q Consensus 154 --------W~~---------------~~~~~~V~------~~~~~~~~~~~vvelP~~~~~~sm~iilP~~~~~~~l~~l 204 (342)
|.. .+....|+ .|.|.+..++++|||||++.++||+|+||++. ++.++
T Consensus 199 nAiYFnGkW~~efDk~~t~krtFy~a~~~d~sv~mMs~~g~fny~et~kakiveLPy~gd~lSmYIvLPk~n---Ni~~F 275 (410)
T COG4826 199 NAIYFNGKWWPEFDKQMTGKRTFYPAKGEDKSVDMMSICGDFNYGETSKAKIVELPYKGDDLSMYIVLPKDN---NITEF 275 (410)
T ss_pred eeEEEcCeeccccchhhccceeeecCChhhhcchhHHhcCCCCcccCcCceEEEcccCCCceEEEEEeeCCC---ChHHH
Confidence 765 12233444 78888999999999999999999999999985 99999
Q ss_pred HHHhcCCchHHHHHhhhcCCCe-eEEEEeeeeEEeeccchHHHHhhCCCccCCCCCCCCCCCCCCCeeecceeeeEEEEe
Q psy7902 205 LAALKKDPTSFKRFTEDSQNLK-PVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLTDSHIAFGDAVHKARLDL 283 (342)
Q Consensus 205 ~~~L~~~~~~l~~~~~~~l~~~-~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~~ad~s~i~~~~l~ls~v~q~~~i~v 283 (342)
++.|+.+ .+.+|..+ |+.+ .+++.||||+.+++..|+++|.+||+-++|+..||||||+..+|+|++|+|+++|+|
T Consensus 276 e~nft~e--~y~elk~~-m~~~~~v~v~iPkFkfetk~el~~aLieMGvvdAF~n~AnFSgI~~~~L~Is~V~Hqa~idv 352 (410)
T COG4826 276 ENNFTLE--KYTELKSN-MEDQDEVEVEIPKFKFETKTELKDALIEMGVVDAFENTANFSGISDRRLEISDVFHQAFIDV 352 (410)
T ss_pred HhhccHH--HHHHHHhc-CCccceEEEEecceeeeehhhhhHHHHHhhHHHHhhcccCcccccCCcccHHHHhhhhheec
Confidence 9999999 99999999 6777 899999999999999999999999999999977999999976799999999999999
Q ss_pred cCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEEcCCCC
Q psy7902 284 DEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVFNEPPN 339 (342)
Q Consensus 284 ~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~P~~ 339 (342)
+|+|++|+|+|++.+...+....-.+|++||||+|+|.|+.||.|||||+|.+|..
T Consensus 353 ~EeGteAaAAT~v~~~a~~~~~~~~e~~vD~PFlf~i~D~~s~~IlFiG~Vv~P~~ 408 (410)
T COG4826 353 DEEGTEAAAATAVVFKAVCAKGGWVEFVVDHPFLFVIEDRRSGCILFIGKVVNPEY 408 (410)
T ss_pred cccchhhhhhceeeeeeeeecccceEEEecCceEEEEecCCcceEEEEeeecCCCC
Confidence 99999999999877665554444569999999999999999999999999999975
No 2
>cd02054 angiotensinogen Angiotensinogen is part of the renin-angiotensin system (RAS), which plays an important role in blood pressure regulation, renal haemodynamics, fluid and electrolyte homeostasis. It is also involved in normal and abnormal growth processes. The growth promoting actions of angiotensin have been shown in a variety of cells and tissues. This subgroup represents clade A8 of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones.
Probab=100.00 E-value=2.1e-69 Score=506.95 Aligned_cols=320 Identities=20% Similarity=0.374 Sum_probs=277.1
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCCC---------hHHHHHHhhHHHHHH
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLD---------KLDTMNVYKMEKLIQ 71 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~~---------~~~~~~~~~~~~~l~ 71 (342)
+||++||+++....+++|+++||+||+.+|+|++.||+|+|++||.++||++.... ..++...++ .+..
T Consensus 8 ~f~~~l~~~l~~~~~~~N~v~SP~Si~~aL~ml~~GA~G~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 85 (372)
T cd02054 8 VLGLRMYGMLSELWVHTNTLLSPTSVFGTLASLYLGASKKTADSLQALLGLPWKSKNSDCTSRVDGHKVLSTLQ--AIQS 85 (372)
T ss_pred HHHHHHHHHHHhhCCCCCEEEChHHHHHHHHHHHcCCCccHHHHHHHHhCCCcccccccccccccHHHHHHHHH--HHHH
Confidence 49999999998767789999999999999999999999999999999999975311 123444444 4444
Q ss_pred HhhhCCCCceEEEEEeeeeccCCCCchhhHhh----hcCCc-eEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCC
Q psy7902 72 GLRANADSGLTFTSTNKIFVNDKIPVKECMTA----IFPSE-IQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQV 145 (342)
Q Consensus 72 ~l~~~~~~~~~l~~~n~l~~~~~~~l~~~f~~----~~~~~-~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i 145 (342)
.+...+.. ..+..+|++|++++++++++|.+ +|+++ ++.+||+ +++.+++ ||+||+++|+|+|++++ .++
T Consensus 86 ~~~~~~~~-~~l~~a~~i~~~~~~~l~~~f~~~~~~~y~a~~~~~vdF~-~~~~a~~~IN~WV~~~T~g~I~~ll--~~~ 161 (372)
T cd02054 86 LVDAQGRQ-LLLSTVVWTFTAPGIHLSQPFVQGLADFSDASFPRSVDFT-EPDVAEEKINNFVQATSDGKVKSSL--KGL 161 (372)
T ss_pred HHcCCCCc-cEEEEEEEEEecCCCCccHHHHHHHHHHhCcccceeecCC-ChHHHHHHHHHHHHHHhcCchhhhc--cCC
Confidence 44433334 67999999999999999999976 79987 9999995 6777777 99999999999999999 468
Q ss_pred CCCceEEE---------ecc-------------CCceEEec--------ceeecCCCCeEEEEeecCCCceEEEEEeCCC
Q psy7902 146 NSRTNLVL---------WLP-------------STQESIII--------ITVLSSELNAHILEVPYKGGNMSMFFLLPPF 195 (342)
Q Consensus 146 ~~~t~lvl---------W~~-------------~~~~~~V~--------~~~~~~~~~~~vvelP~~~~~~sm~iilP~~ 195 (342)
+++|.++| |++ +++.++|| .|.+.+++++++++|||+ ++++|+||||++
T Consensus 162 ~~~t~lvLvNaiyFkg~W~~~F~~~~T~~f~~~~~~~~~V~mM~~~~~~~y~~~~~~~~~vleLPy~-~~~sm~iiLP~~ 240 (372)
T cd02054 162 SPDSDLLFATSVHFQGNWKTASQLEEPQEFWVDNNTSVSVPMLSHTGTFKYLSDIQDNFSITQLPLS-KRACLLLVQPHE 240 (372)
T ss_pred CCCCeEEEEEEEEEEHhhcCCCCcccceeEEeCCCCEEEEeeeeccCcEEEEEecCCCcEEEEEeeC-CCeEEEEEeCCC
Confidence 88999888 887 34456676 566677889999999996 579999999998
Q ss_pred CCCCcHHHHHHHhcCCchHHHHHhhhcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCCCCCCCCCCCCCeeecce
Q psy7902 196 ASQDGVGDILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLTDSHIAFGDA 275 (342)
Q Consensus 196 ~~~~~l~~l~~~L~~~~~~l~~~~~~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~~ad~s~i~~~~l~ls~v 275 (342)
+ .+|.++++.|+.+ .+..|..+ +..+.|+|.||||+|++++||+++|++||++++|+..|||++|++.+++|++|
T Consensus 241 ~--~~l~~l~~~L~~~--~l~~~~~~-~~~~~v~v~lPkF~i~~~~~L~~~L~~lGi~~~F~~~Adfs~i~~~~l~vs~v 315 (372)
T cd02054 241 G--SDLDKVEGKLPQQ--NSSNWLKN-LSPRTIELTLPKFSLQGSYDLQDLLAQMELPALLGSEANLSKLSNDRFTVGKV 315 (372)
T ss_pred C--CCHHHHHHhhCHH--HHHHHHHh-CCceEEEEECCeEEEEEEeccHHHHHHcCCcccccCccccccccCCCceeeee
Confidence 7 7999999999987 89999988 68899999999999999999999999999999998789999999667999999
Q ss_pred eeeEEEEecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEEcCC
Q psy7902 276 VHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVFNEP 337 (342)
Q Consensus 276 ~q~~~i~v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~P 337 (342)
+|++.|+|||+|++|+|+|.+.. .+ .+.+|++||||+|+|+|+.|+.|||+|+|.+|
T Consensus 316 ~hka~ieVdE~GteAaaat~~~~----~~-~~~~f~~drPF~f~I~d~~t~~iLF~G~v~~P 372 (372)
T cd02054 316 LNKVFFELSEDGTEVQESTQQLN----KP-EVLEVTLNRPFLFAVYEANSNAILFLGRVTNP 372 (372)
T ss_pred eeeEEEEEccCceeccccccccc----CC-CCceEEecCCEEEEEEECCCCcEEEEEEecCC
Confidence 99999999999999999997531 12 25689999999999999999999999999998
No 3
>cd02048 neuroserpin Neuroserpin is a inhibitory member of the SERine Proteinase INhibitor (serpin) family that reacts preferentially with tissue-type plasminogen activator (tPA). It is located in neurons in regions of the brain where tPA is also found, suggesting that neuroserpin is the selective inhibitor of tPA in the central nervous system (CNS). This subgroup corresponds to clade I of the serpin superfamily.
Probab=100.00 E-value=5.9e-70 Score=514.60 Aligned_cols=330 Identities=25% Similarity=0.434 Sum_probs=286.6
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCCChHHHHHHhhHHHHHHHhhhCCCCc
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGLRANADSG 80 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 80 (342)
+||++||+++...++++|+|+||+||+.+|+||+.||+|+|++||.++||++.. ...+....++ .++..+......
T Consensus 6 ~Fa~~l~~~~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~el~~~L~~~~~-~~~~~~~~~~--~~~~~~~~~~~~- 81 (388)
T cd02048 6 ELSVDLYNALRASKEDENIIFSPLSTALALGMVELGAKGSALKEIRHSLGYDGL-KNGEEFSFLK--DLSSMITAKEKE- 81 (388)
T ss_pred HHHHHHHHHhhccCCCCcEEEChHHHHHHHHHHhhhcCCcHHHHHHHHhCCCCC-ChHHHHHHHH--HHHHHhccCCCc-
Confidence 599999999988778899999999999999999999999999999999999864 2334444454 455555444444
Q ss_pred eEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceEEE--
Q psy7902 81 LTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL-- 153 (342)
Q Consensus 81 ~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~lvl-- 153 (342)
..++++|++|++++++++++|.+ +|+++++.+||. +++.+++ ||+|++++|+|+|++++++.+++++|.+++
T Consensus 82 ~~l~~an~i~v~~~~~l~~~f~~~~~~~f~~~~~~vdF~-~~~~~~~~IN~wv~~~T~g~I~~l~~~~~l~~~t~lvlvN 160 (388)
T cd02048 82 YVFNLANSLYLQNGFHVKEKFLQSNKKYFNAAVKLVDFS-QVKAVAEHINKWVENHTNNKIKDMFSSRDFTPLTRLVLVN 160 (388)
T ss_pred cchHHhhhhHhhcCCCccHHHHHHHHHHhcCeeEEECCC-ChHHHHHHHHHHHHHhccCchhhcCCCccCCHHHHHHhhh
Confidence 77999999999999999999976 899999999995 6666776 999999999999999998888999888877
Q ss_pred -------ecc---------------CCceEEec--------ceeecCC------CCeEEEEeecCCCceEEEEEeCCCCC
Q psy7902 154 -------WLP---------------STQESIII--------ITVLSSE------LNAHILEVPYKGGNMSMFFLLPPFAS 197 (342)
Q Consensus 154 -------W~~---------------~~~~~~V~--------~~~~~~~------~~~~vvelP~~~~~~sm~iilP~~~~ 197 (342)
|++ +++.+.|| +|++.++ +++++++|||++++++|+||||++.
T Consensus 161 ai~Fkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~~~y~~~~~~~~~~~~~~~vv~LPy~~~~~sm~iiLP~~~- 239 (388)
T cd02048 161 ALYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLELPYEGDEISLMIILSRQE- 239 (388)
T ss_pred eEEEeeeccCCCCHHHCeeccEEECCCceEEeehhcccCcEEEEeccccccccccCcEEEEEecCCCceEEEEEccCCC-
Confidence 887 34556677 4555666 7899999999988999999999987
Q ss_pred CCcHHHHHHHhcCCchHHHHHhhhcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCCCCCCCCCC-CCCeeeccee
Q psy7902 198 QDGVGDILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLT-DSHIAFGDAV 276 (342)
Q Consensus 198 ~~~l~~l~~~L~~~~~~l~~~~~~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~~ad~s~i~-~~~l~ls~v~ 276 (342)
.+|.+++++|+.. .+..|..+ ++.+.++|.||||++++++||+++|++||++++|+.+|||++|+ +++++|++++
T Consensus 240 -~~l~~l~~~l~~~--~l~~~~~~-~~~~~v~l~lPkF~i~~~~~l~~~L~~lGi~~~F~~~adfs~i~~~~~l~vs~v~ 315 (388)
T cd02048 240 -VPLATLEPLVKAP--LIEEWANS-VKKQKVEVYLPRFKVEQKIDLKDVLKNLGITEIFSGGADLSGISDSKELYVSKVF 315 (388)
T ss_pred -CCHHHHHHHhChH--HHHHHHHh-CceeEEEEEccEEEEEEEechHHHHHHcCCchhhcCccCcccccCCCCeEEEEEE
Confidence 7999999999988 99999988 69999999999999999999999999999999999889999999 6779999999
Q ss_pred eeEEEEecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEEcCCCCCC
Q psy7902 277 HKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVFNEPPNKE 341 (342)
Q Consensus 277 q~~~i~v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~P~~~~ 341 (342)
|++.|+|||+|++|+|+|.+.....+.+ .+.+|+|||||+|+|+|+.|+.|||+|+|.+|...+
T Consensus 316 hka~ieV~E~Gt~a~a~t~~~~~~~~~~-~~~~f~~nrPF~f~I~d~~t~~iLF~G~v~~P~~~~ 379 (388)
T cd02048 316 HKVFLEVNEEGSEAAASSGMIAISRMAV-LYPQVIVDHPFFFLIRNRRTGSILFMGRVMHPETMT 379 (388)
T ss_pred eeeEEEECCCcceehhhcccccccccCC-CCceEEecCCEEEEEEECCCCeEEEEEEecCCCccc
Confidence 9999999999999999987543322222 235899999999999999999999999999998654
No 4
>cd02044 ov-serpin ovalbumin family of serpins (ov-serpins). Family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). This subgroup corresponds to clade B of the serpin superfamily. In general, serpins exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia.
Probab=100.00 E-value=2e-69 Score=508.68 Aligned_cols=323 Identities=26% Similarity=0.520 Sum_probs=288.5
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCCChHHHHHHhhHHHHHHHhhhCCCCc
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGLRANADSG 80 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 80 (342)
+||++||+++....+++|+|+||+||+.+|+||+.||+|+|++||.++||++. ..+++..|+ .++..+...+..
T Consensus 7 ~F~~~l~~~~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~el~~~L~~~~---~~~~~~~~~--~~~~~~~~~~~~- 80 (370)
T cd02044 7 AFAVDVFKELSKKSALQNVFFSPIAIMSSLAMVYLGAKGSTANQIGKVLHFDN---VKDVHSSFQ--TLLSDINKLNSF- 80 (370)
T ss_pred HHHHHHHHHHhhcCCCCcEEECHHHHHHHHHHHhhhcCCcHHHHHHHHhCCCC---HHHHHHHHH--HHHHHHhcCCCC-
Confidence 59999999998877889999999999999999999999999999999999973 356777776 677666655455
Q ss_pred eEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceEEE--
Q psy7902 81 LTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL-- 153 (342)
Q Consensus 81 ~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~lvl-- 153 (342)
..++++|++|++++++++++|.+ +|+++++.+||.++++.+++ ||+|++++|+|+|++++++.++++++.+++
T Consensus 81 ~~l~~a~~~~~~~~~~l~~~f~~~~~~~~~~~~~~vdF~~~~~~a~~~IN~wv~~~T~g~I~~lv~~~~l~~~t~lvlvn 160 (370)
T cd02044 81 YSLKLVNRLYGEKRYNFLPEFLSSTKKPYAKELETVDFKDKAEETRGQINSWIKDQTKGKIENLLPENSVDSQTAMVVVN 160 (370)
T ss_pred ceEeeeeehhhcCCCcccHHHHHHHHHhhccceEeccccCCHHHHHHHHHHHHHHhcCCchhhcCCCCCCCcchhheeee
Confidence 78999999999999999999976 79999999999766777777 999999999999999998889999998887
Q ss_pred -------ecc---------------CCceEEec--------ceeecCCCCeEEEEeecCCCceEEEEEeCCCCCCCcHHH
Q psy7902 154 -------WLP---------------STQESIII--------ITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203 (342)
Q Consensus 154 -------W~~---------------~~~~~~V~--------~~~~~~~~~~~vvelP~~~~~~sm~iilP~~~~~~~l~~ 203 (342)
|++ +++++.|| +|++.+++++++|+|||++++++|+||||++. .+|.+
T Consensus 161 ai~Fkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~vv~LPy~~~~~sm~iiLP~~~--~~l~~ 238 (370)
T cd02044 161 AAYFKGKWMKKFSEEETKESPFRVNKTETKPVQMMYMEATFNMGNIESLKMKILELPFANKDLSMFILLPDEV--TGLEK 238 (370)
T ss_pred eeeEcccccCCCChhhCccCcCCcCCCcEEEeeCccccCceeeEEcCCCCeEEEEcccCCCceEEEEEcCCCC--CcHHH
Confidence 887 34456676 67778999999999999988999999999997 79999
Q ss_pred HHHHhcCCchHHHHHhh--hcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCC-CCCCCCCC-CCCeeecceeeeE
Q psy7902 204 ILAALKKDPTSFKRFTE--DSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSP-GADLSRLT-DSHIAFGDAVHKA 279 (342)
Q Consensus 204 l~~~L~~~~~~l~~~~~--~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~-~ad~s~i~-~~~l~ls~v~q~~ 279 (342)
+++.|+.+ .+..|.. . ++.+.|+|.||||++++++||++.|++||++++|++ .|||++|+ .++++|++|+|++
T Consensus 239 l~~~l~~~--~l~~~~~~~~-~~~~~v~l~lPkF~i~~~~~l~~~L~~mGl~~~F~~~~Adfs~ms~~~~l~vs~v~qka 315 (370)
T cd02044 239 LESEINYE--KLNKWTSPST-MAEAKVKVYLPRFKMEKMYDLKSVLESLGMKDAFSEGRANFSGMSETKGLALSNVIHKA 315 (370)
T ss_pred HHHHhCHH--HHHHhhcccc-ceeeEEEEEeeEEEEeeEEccHHHHHHcCchhhCCCCCCChhhcCCCCCeeEeeeeEee
Confidence 99999987 8988875 4 577899999999999999999999999999999998 59999999 6779999999999
Q ss_pred EEEecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEEcCC
Q psy7902 280 RLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVFNEP 337 (342)
Q Consensus 280 ~i~v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~P 337 (342)
.|+|||+|++|+|+|......++ .+.+|++||||+|+|+|+.|+.|||+|+|.+|
T Consensus 316 ~ievdE~Gt~aaa~t~~~~~~~~---~~~~f~~drPF~f~I~~~~t~~iLF~G~v~~P 370 (370)
T cd02044 316 SLEINEDGTEAAEVTGAVMLQRS---VKEEFNADHPFLFIIRHNKTNCILFFGKFSSP 370 (370)
T ss_pred EEEECCCccccccccceeeeccC---CCCeEEeeCCEEEEEEECCCCeEEEEEEecCC
Confidence 99999999999999976443332 24789999999999999999999999999998
No 5
>KOG2392|consensus
Probab=100.00 E-value=4.4e-69 Score=503.61 Aligned_cols=328 Identities=32% Similarity=0.540 Sum_probs=296.2
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCCChHHHHHHhhHHHHHHHhhhCCCCc
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGLRANADSG 80 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 80 (342)
+|+++||+.+....+++|++|||+||..+|+|++.||+|.|++||+++|+++.......++..|+ .++........+
T Consensus 13 ~f~~~l~~~~~~~~~~~Ni~fSP~SI~~aL~m~~lGa~g~T~~qi~~~L~~~~~~~~~~~~~~~~--~~~~~~~~~~~~- 89 (380)
T KOG2392|consen 13 DFALDLYRQLAKSAPDENVVFSPLSISSALAMVSLGAKGETADQILKALHFNSTDEENEVHESFQ--SLLLLLNSTESG- 89 (380)
T ss_pred HHHHHHHHHHHhhCCCCCEEEChHHHHHHHHHHHhcCCccHHHHHHHHhCCCCCcchHHHHHHHH--HHHHHhccccCC-
Confidence 59999999999877899999999999999999999999999999999999997533567888886 555434344445
Q ss_pred eEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceEEE--
Q psy7902 81 LTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL-- 153 (342)
Q Consensus 81 ~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~lvl-- 153 (342)
+.++++|++|+++++.+.++|.+ +|++++..+||.++++.+++ ||.|++++|+|+|.+++++.++++.|.+++
T Consensus 90 ~~l~~an~l~~~~~~~~~~~f~~~~~~~y~a~~~~~dF~~~~e~~~~~IN~wv~~~T~gkI~~ll~~~~~~~~t~lvLvN 169 (380)
T KOG2392|consen 90 YELKLANRLFVSKSLKLLQKFLELVKKLYKAEAESLDFSNDTEEAAKEINEWVEEHTNGKIKDLLSPDSIDSLTVLVLVN 169 (380)
T ss_pred ceEEEeeeheecCCccccHHHHHHHHHHHhCcceeecCccChHHHHHHHHHHHHHHcCCchhhhcCCCCCCcchhheeee
Confidence 89999999999999999999975 89999999999756788888 999999999999999999999988888887
Q ss_pred -------ecc---------------CCceEEec--------ceeecCCCCeEEEEeecCCCceEEEEEeCCCCCCCcHHH
Q psy7902 154 -------WLP---------------STQESIII--------ITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203 (342)
Q Consensus 154 -------W~~---------------~~~~~~V~--------~~~~~~~~~~~vvelP~~~~~~sm~iilP~~~~~~~l~~ 203 (342)
|+. +++.++|| .|.+..++.|++++|||.+.+++|+|+||++. .+|.+
T Consensus 170 aiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~VpmM~~~~~f~~~~~~~l~~~vl~LpY~~~~~sm~i~LP~~~--~gL~~ 247 (380)
T KOG2392|consen 170 AIYFKGKWEKKFDKELTKESDFFLSEGTSVKVPMMHQEGSFRYAEDEDLFAVVLELPYKGSNLSMLILLPDER--DGLKE 247 (380)
T ss_pred hheeehhhcCCCChhhccccccEECCCeEEEeechhccCccceEEeCCcceEEEECccCCCCeEEEEEeCCCC--CCHHH
Confidence 877 45677888 57789999999999999988999999999998 79999
Q ss_pred HHHHhcCCchHHHHHh-hhcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCC-CCCCCCCC-CCCeeecceeeeEE
Q psy7902 204 ILAALKKDPTSFKRFT-EDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSP-GADLSRLT-DSHIAFGDAVHKAR 280 (342)
Q Consensus 204 l~~~L~~~~~~l~~~~-~~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~-~ad~s~i~-~~~l~ls~v~q~~~ 280 (342)
++++|+.+ .+..|. .+ +..+.|+|.||||+++.++||+++|++|||+++|++ .|||++|+ +.+++|++++|++.
T Consensus 248 le~~L~~~--~~~~~~~~~-~~~~~v~v~lPKfkie~~~dL~~~L~~lGi~~~F~~~~adls~ls~~~~l~vs~v~Hka~ 324 (380)
T KOG2392|consen 248 LEKKLTSE--TLVEWLFSR-MSEKVVEVSLPKFKIEFDYDLKEVLKQLGITDIFSESKADLSGLSESSNLYISKVIHKAF 324 (380)
T ss_pred HHHHhChh--hHHHhhhhh-hhceeEEEECCCEEEEEEechHHHHHHcCChhccCCCccccccCccCCCeeeeeeeEEEE
Confidence 99999998 999999 67 689999999999999999999999999999999999 59999999 66899999999999
Q ss_pred EEecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEEcCC
Q psy7902 281 LDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVFNEP 337 (342)
Q Consensus 281 i~v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~P 337 (342)
|||||+|++|+|+|.+....++.+. +.+|.|||||+|+|+|+.|+.|||+|+|.+|
T Consensus 325 ieV~E~GteAaaat~~~~~~~~~~~-~~~f~adhPFlF~I~~~~t~~iLF~G~v~~P 380 (380)
T KOG2392|consen 325 IEVDEEGTEAAAATAVEIVLRSLPP-PEEFVADHPFLFVIRDNKTGSILFLGRVVDP 380 (380)
T ss_pred EEECCCCchhhhhhhhHHhhccCCC-CCeEECCCCEEEEEEECCCCcEEEEEEccCC
Confidence 9999999999999997766555433 6899999999999999999999999999998
No 6
>cd02059 ovalbumin_like The ovalbumin_like group of serpins contains ovalbumin, the squamous cell carcinoma antigen 1 (SCCA1) and other closely related serpins of clade B of the serpin superfamily. Ovalbumin, the major protein component of avian egg white, is a non-inhibitory member of SERine Proteinase INhibitorS (serpins). In contrast, SCCA1 inhibits cysteine proteinases such as cathepsin S, K, L, and papain, a so called cross-class serpin.
Probab=100.00 E-value=1.5e-68 Score=505.38 Aligned_cols=329 Identities=31% Similarity=0.560 Sum_probs=289.0
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCC--------------ChHHHHHHhhH
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENL--------------DKLDTMNVYKM 66 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~--------------~~~~~~~~~~~ 66 (342)
+||++||+++..+.+++|+|+||+||+.+|+||+.||+|+|++||.++||++... ...+++..|+
T Consensus 7 ~Fa~~l~~~~~~~~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 85 (389)
T cd02059 7 EFCFDLFKELKKNHKNKNIFFSPLSISSALGMVLLGARDDTAAQIEKVLHFDHASGSGSSKPAASAQCNQSGGVHSQFK- 85 (389)
T ss_pred HHHHHHHHHHhhcCCCCCEEECHHHHHHHHHHHhcccCCcHHHHHHHHhCCCccccccccccccccccccHHHHHHHHH-
Confidence 5999999999887788999999999999999999999999999999999997421 1235677776
Q ss_pred HHHHHHhhhCCCCceEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCcc
Q psy7902 67 EKLIQGLRANADSGLTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIA 141 (342)
Q Consensus 67 ~~~l~~l~~~~~~~~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~ 141 (342)
.++..+.....+ ..++++|++|++++++++++|.+ +|+++++.+||.+.++.+++ ||+|++++|+|+|.++++
T Consensus 86 -~l~~~~~~~~~~-~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~vdF~~~~~~~~~~IN~wv~~~T~g~I~~~~~ 163 (389)
T cd02059 86 -DLLSQINKPNDD-YELSIANRLYGEKTYPFHQEYLDCVEKLYRAKLEPVDFQNAAEASRKKINSWVESQTNGKIKNLFG 163 (389)
T ss_pred -HHHHHHcCCCCC-cEEEEeeehhhhCCCCccHHHHHHHHHHhcCeeEEEcCCCCHHHHHHHHHHHHHHhccchhhhcCC
Confidence 667666554455 88999999999999999999975 89999999999766666766 999999999999999999
Q ss_pred CCCCCCCceEEE---------ecc---------------CCceEEec--------ceeecCCCCeEEEEeecCCCceEEE
Q psy7902 142 TGQVNSRTNLVL---------WLP---------------STQESIII--------ITVLSSELNAHILEVPYKGGNMSMF 189 (342)
Q Consensus 142 ~~~i~~~t~lvl---------W~~---------------~~~~~~V~--------~~~~~~~~~~~vvelP~~~~~~sm~ 189 (342)
+.++++++.+++ |++ +++.+.|| +|++.+++++++|+|||++++++|+
T Consensus 164 ~~~i~~~t~lvlvna~~Fkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~~~~~~~~~~~~~vl~LPy~~~~~sm~ 243 (389)
T cd02059 164 KGTIDSSTVLVLVNAIYFKGKWEKKFEKENTVDAPFKLNENENKPVQMMYQIGKFKLASIEEPKMKILELPYAGGGLSMI 243 (389)
T ss_pred CCCCCcccceeeEeeeEEeeeccCCCCcccCccCccEeCCCceEEeehhcccCcEEEEEeCCCCcEEEEeecCCCceEEE
Confidence 889999999887 877 34456677 5678899999999999998899999
Q ss_pred EEeCCCCCCCcHHHHHHHhcCCchHHHHHhh-hcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCC-CCCCCCCC-
Q psy7902 190 FLLPPFASQDGVGDILAALKKDPTSFKRFTE-DSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSP-GADLSRLT- 266 (342)
Q Consensus 190 iilP~~~~~~~l~~l~~~L~~~~~~l~~~~~-~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~-~ad~s~i~- 266 (342)
||||++. .+|.+++++|+.+ .+..|.. ..++.+.|+|.||||++++++||++.|++||++++|++ .|||++|+
T Consensus 244 iiLP~~~--~~L~~l~~~l~~~--~l~~~~~~~~~~~~~v~l~lPkF~i~~~~dl~~~L~~mGi~~~F~~~~adfs~~~~ 319 (389)
T cd02059 244 VLLPDEI--SGLEQLESKLTYE--KLMEWTSSENMRERKVEVYLPRFKLEEKYNLKSVLKAMGMTDIFSESKADLSGISS 319 (389)
T ss_pred EEccCCC--CCHHHHHHHhCHH--HHHHhhhhhcceeeEEEEECCCEEeeeeecHHHHHHHcCCccccCCccccccccCC
Confidence 9999987 7999999999987 8888863 22678899999999999999999999999999999998 59999999
Q ss_pred CCCeeecceeeeEEEEecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEEcCC
Q psy7902 267 DSHIAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVFNEP 337 (342)
Q Consensus 267 ~~~l~ls~v~q~~~i~v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~P 337 (342)
+++++|++++|++.|+|||+|++|+++|.+....++. +.+.+|++||||+|+|+|+.|+.|||+|+|.+|
T Consensus 320 ~~~l~v~~v~hka~ieV~E~G~~a~a~t~~~~~~~~~-~~~~~f~~nrPF~f~I~~~~t~~iLF~G~v~~P 389 (389)
T cd02059 320 SKSLYLSKAIHKSYVEVNEEGTEAAAATGAGIVEKSL-PVSEEFRADHPFLFFIRHNKTNTILFFGRFSSP 389 (389)
T ss_pred CCCceEeeeeeeEEEEECCCceeecccccceeeecCC-CCCceEEecCCEEEEEEECCCCeEEEEEEecCC
Confidence 6789999999999999999999999999865443332 345789999999999999999999999999998
No 7
>cd02057 maspin_like Maspin (mammary serine proteinase inhibitor), a member of the serpin superfamily, with a multitude of effects on cells and tissues at an assortment of developmental stages. Maspin has tumor suppressing activity against breast and prostate cancer. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones.
Probab=100.00 E-value=6.4e-69 Score=504.85 Aligned_cols=324 Identities=22% Similarity=0.459 Sum_probs=282.0
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCCChHHHHHHhhHHHHHHHhhhCCCCc
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGLRANADSG 80 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 80 (342)
+||++||+++...++++|+|+||+||+.+|+||+.||+|+|++||.++||++. ..+++..++ .+...++.....
T Consensus 7 ~F~~~l~~~~~~~~~~~Nvv~SP~si~~aL~ml~~Ga~g~T~~el~~~L~~~~---~~~~~~~~~--~~~~~~~~~~~~- 80 (372)
T cd02057 7 AFAVDLFKKLCEKEPTGNVVFSPICLSTSLALAQVGAKGDTANEIGKVLHFEN---VKDVPFGFQ--TVTSDVSKLSSF- 80 (372)
T ss_pred HHHHHHHHHHhccCCCCcEEECHHHHHHHHHHHHhhcCCcHHHHHHHHhCCCC---hhHHHHHHH--HHHHHHhcCCcc-
Confidence 59999999998777889999999999999999999999999999999999974 245666665 555555443344
Q ss_pred eEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceEEE--
Q psy7902 81 LTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL-- 153 (342)
Q Consensus 81 ~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~lvl-- 153 (342)
..++++|++|++++++++++|.+ +|++++..+||.++++.+++ ||+||+++|+|+|++++++.+++++|.+++
T Consensus 81 ~~l~~an~l~v~~~~~~~~~f~~~~~~~y~~~~~~vdF~~~~~~a~~~IN~wv~~~T~g~I~~l~~~~~i~~~t~l~lvN 160 (372)
T cd02057 81 YSLKLIKRLYVDKSLNLSTDFINSTKRPYPKELETVDFKDKLEETRGQINNSIKELTDGHFENILNENSVNDQTKILVVN 160 (372)
T ss_pred chhHhhhhhhhhCCCCccHHHHHHHHHHhcCeeEEecCCCCHHHHHHHHHHHHHHhccChhhhcCCCCCCCCCCceeeee
Confidence 67999999999999999999975 79999999999777777777 999999999999999998888999999888
Q ss_pred -------ecc---------------CCceEEec--------ceeecCCCCeEEEEeecCCCceEEEEEeCCCC--CCCcH
Q psy7902 154 -------WLP---------------STQESIII--------ITVLSSELNAHILEVPYKGGNMSMFFLLPPFA--SQDGV 201 (342)
Q Consensus 154 -------W~~---------------~~~~~~V~--------~~~~~~~~~~~vvelP~~~~~~sm~iilP~~~--~~~~l 201 (342)
|++ +++.+.|| .|++.++++|++++|||++++++|+|+||++. ...+|
T Consensus 161 a~yFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~vv~LPy~~~~~sm~iiLP~~~~~~~~~L 240 (372)
T cd02057 161 AAYFVGNWMKKFPESETKECPFRVNKTETKPVQMMNLEATFSMGYIDELNTKILELPFQNKHLSMLILLPKDIEDESTGL 240 (372)
T ss_pred hheeccccCCCCCccccccCCCEECCCceEeeEhhheeceEEeEEeCCcCceEEEeecCCCCEEEEEEecCccccccccH
Confidence 986 23446676 57788999999999999988999999999851 02589
Q ss_pred HHHHHHhcCCchHHHHHhhh-cCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCC-CCCCCCCC-CCCeeecceeee
Q psy7902 202 GDILAALKKDPTSFKRFTED-SQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSP-GADLSRLT-DSHIAFGDAVHK 278 (342)
Q Consensus 202 ~~l~~~L~~~~~~l~~~~~~-~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~-~ad~s~i~-~~~l~ls~v~q~ 278 (342)
.++++.|+.+ .+..|... .+..+.|+|.||||+++.++||+++|++||++++|++ .|||++|+ +++++|++|+|+
T Consensus 241 ~~l~~~l~~~--~l~~~~~~~~~~~~~v~l~lPKF~i~~~~~l~~~L~~lGi~~~F~~~~adfs~i~~~~~l~vs~v~hk 318 (372)
T cd02057 241 EKLEKQLTSE--SLSQWTNPSMMANAKVKVSLPKFKVEKMIDLKAMLESLGLKHIFNEDASDFSGMSETKGVALSNVIHK 318 (372)
T ss_pred HHHHHhcChh--HHHHhhchhcceeEEEEEECCcEEEEEEechHHHHHHcCChhhcCCcccccccccCCCceEEEeeeee
Confidence 9999999988 89888632 2467899999999999999999999999999999998 69999999 667999999999
Q ss_pred EEEEecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEEcCC
Q psy7902 279 ARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVFNEP 337 (342)
Q Consensus 279 ~~i~v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~P 337 (342)
+.|||||+|++|+++|..... ..+..|+|||||+|+|+|+.|+.|||+|+|.+|
T Consensus 319 ~~ieVdE~Gt~a~a~t~~~~~-----~~~~~f~~nrPF~f~I~d~~t~~iLF~G~v~~p 372 (372)
T cd02057 319 VCLEVNEDGGESIEVPGARIL-----QHKDEFNADHPFIFIIRHNKTRNIIFFGRFCSP 372 (372)
T ss_pred eEEEECCCCeecchhcceecc-----CCCCeEEeeCCEEEEEEECCCCeEEEEEEecCC
Confidence 999999999999998864321 124589999999999999999999999999998
No 8
>cd02045 antithrombin-III_like Antithrombin is a serine proteinase inhibitor (serpin) which controls the process of coagulation. It is the most important anticoagulant molecule in mammalian circulation systems, controlled by its interaction with the co-factor, heparin, which accelerates its interaction with target proteases, such as thrombin and factor Xa. This subgroup corresponds to clade C of the serpin superfamily.
Probab=100.00 E-value=1.5e-68 Score=503.31 Aligned_cols=326 Identities=27% Similarity=0.492 Sum_probs=283.8
Q ss_pred ChHHHHHHHHhhc-CCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCC--ChHHHHHHhhHHHHHHHhh-hC
Q psy7902 1 EFTFDLLTVLNNA-NKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENL--DKLDTMNVYKMEKLIQGLR-AN 76 (342)
Q Consensus 1 ~Fa~~l~~~l~~~-~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~--~~~~~~~~~~~~~~l~~l~-~~ 76 (342)
+||++||+++... .+++|+++||+||+.+|+||+.||+|+|++||.++||++... ...+++..+. .+...+. ..
T Consensus 11 ~Fa~~l~~~l~~~~~~~~Niv~SP~si~~aL~ml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~--~l~~~~~~~~ 88 (381)
T cd02045 11 RFALAFYKHLADSKSNDENIFLSPLSISTAFAMTKLGACNNTLEQLMEVFQFDTISEKTSDQVHFFFA--KLNCRLYRKA 88 (381)
T ss_pred HHHHHHHHHHhcccCCCCCEEECcHHHHHHHHHHhhhcCCcHHHHHHHHhCCCccccccHHHHHHHHH--HHHHHHhccc
Confidence 5999999999865 478999999999999999999999999999999999997421 2335666665 5555552 22
Q ss_pred CCCceEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceE
Q psy7902 77 ADSGLTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNL 151 (342)
Q Consensus 77 ~~~~~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~l 151 (342)
+.+ ..+.++|++|++++++++++|.+ +|+++++.+||.++++.+++ ||+|++++|+|+|++++++.+++++|.+
T Consensus 89 ~~~-~~l~~an~l~~~~~~~l~~~f~~~~~~~y~~~~~~vdF~~~~~~~~~~IN~wv~~~T~g~I~~ll~~~~l~~~t~l 167 (381)
T cd02045 89 NKS-SELISANRLFGDKSLTFNETYQDISEIVYGAKLWPLDFKEKPELSRITINEWIANKTENRITDVIPEGAIDTNTVL 167 (381)
T ss_pred CCc-chhhhhhhhhhcCCCchhHHHHHHHHHhhcCeeEEecCCCCHHHHHHHHHHHHHHHHhhHHHhhCCCCCCCCccce
Confidence 334 67999999999999999999976 79999999999777888877 9999999999999999988899999998
Q ss_pred EE---------ecc---------------CCceEEec--------ceeecCCCCeEEEEeecCCCceEEEEEeCCCCCCC
Q psy7902 152 VL---------WLP---------------STQESIII--------ITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQD 199 (342)
Q Consensus 152 vl---------W~~---------------~~~~~~V~--------~~~~~~~~~~~vvelP~~~~~~sm~iilP~~~~~~ 199 (342)
++ |++ +++.+.|| +|++.+++++++++|||++++++|+||||++. .
T Consensus 168 vlvna~~Fkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~~~y~~~~~~~~~~l~LPy~~~~~sm~iilP~~~--~ 245 (381)
T cd02045 168 VLVNAIYFKGLWKSKFDKENTRKDLFHKAPGEKCPVPMMYQESKFRYAKIPEDKVQVLELPYKGDDITMVLILPKEG--T 245 (381)
T ss_pred eeEeeeEEeccccCCCCcccCcccccCcCCCcEEEEeccCccceeeeEecCCCCcEEEEeecCCCceEEEEEeCCCC--C
Confidence 87 877 34556677 56778899999999999988999999999987 7
Q ss_pred cHHHHHHHhcCCchHHHHHhhhcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCC-CCCCCCCC-C--CCeeecce
Q psy7902 200 GVGDILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSP-GADLSRLT-D--SHIAFGDA 275 (342)
Q Consensus 200 ~l~~l~~~L~~~~~~l~~~~~~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~-~ad~s~i~-~--~~l~ls~v 275 (342)
+|.+++++|+.+ .+..|+.+ ++.+.|+|.||||+++.++||+++|++||++++|++ +|||++|+ . .+++|++|
T Consensus 246 ~l~~l~~~l~~~--~l~~~~~~-~~~~~v~v~lPkF~i~~~~~l~~~L~~lGi~~~F~~~~Adfs~i~~~~~~~l~vs~v 322 (381)
T cd02045 246 TLSEVEQNLTLD--KLQGWLDA-MKETTLAVQIPRFRVEDSFSVKEQLQKMGLEDLFSPENAKLPGIVAGGRTDLYVSDA 322 (381)
T ss_pred CHHHHHHhcCHH--HHHHHHHh-CcCcEEEEECCCEEEeeEecHHHHHHHcCCcccCCCCCCCccccccCCCCCceeecc
Confidence 999999999988 99999988 688999999999999999999999999999999998 79999998 3 46999999
Q ss_pred eeeEEEEecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEE
Q psy7902 276 VHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVF 334 (342)
Q Consensus 276 ~q~~~i~v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v 334 (342)
+|++.|+|||+|++|+|+|.+....++.+..+.+|++||||+|+|+|+.|+.|||+|+|
T Consensus 323 ~hka~ieV~E~GteAaaat~~~~~~~s~~~~~~~f~~nrPF~f~I~d~~t~~iLF~G~v 381 (381)
T cd02045 323 FHKAFLEVNEEGSEASAATAVVITGRSLNINRIIFVANRPFLLFIREVAINAIIFMGRV 381 (381)
T ss_pred ceeeEEEECCCCeehhhhhhhhhhhccCCCCCCEEEeeCCEEEEEEECCCCcEEEEEeC
Confidence 99999999999999999997654433333344689999999999999999999999996
No 9
>cd02047 HCII Heparin cofactor II (HCII) inhibits thrombin, the final protease of the coagulation cascade. HCII is allosterically activated by binding to cell surface glycosaminoglycans (GAGs). The specificity of HCII for thrombin is conferred by a highly acidic hirudin-like N-terminal tail, which becomes available after GAG binding for interaction with the anion-binding exosite I of thrombin. This subgroup corresponds to clade D of the serpin superfamily.
Probab=100.00 E-value=1.3e-67 Score=502.13 Aligned_cols=323 Identities=25% Similarity=0.450 Sum_probs=282.5
Q ss_pred ChHHHHHHHHhhc-CCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCC------CChHHHHHHhhHHHHHHHh
Q psy7902 1 EFTFDLLTVLNNA-NKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPEN------LDKLDTMNVYKMEKLIQGL 73 (342)
Q Consensus 1 ~Fa~~l~~~l~~~-~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~------~~~~~~~~~~~~~~~l~~l 73 (342)
+||++||+++... ++++|+++||+||+.+|+||+.||+|+|++||.++||++.. ....+++..|+ .+.+.+
T Consensus 71 ~Fa~~L~~~l~~~~~~~~Niv~SP~SI~~aLaml~~GA~G~T~~ql~~~Lg~~~~~~~~~~~~~~~~~~~~~--~l~~~l 148 (436)
T cd02047 71 NFGFNLYRVLKDQVNTSDNILLAPVGISTAMGMISLGLKGQTQEQVLSTLGFKDFVNASSKYEITTVHNLFR--KLTHRL 148 (436)
T ss_pred HHHHHHHHHHhhccCCCCcEEEChHHHHHHHHHHHhhcccHHHHHHHHHhcccccccccccccHHHHHHHHH--HHHHHh
Confidence 4999999999864 57899999999999999999999999999999999999741 01235677776 666666
Q ss_pred hhCCCCceEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHHHHHHHHHhcccccccCccCCCCCCCc
Q psy7902 74 RANADSGLTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARAINSWVAQETKNNIKDLIATGQVNSRT 149 (342)
Q Consensus 74 ~~~~~~~~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~iN~wv~~~T~g~i~~~~~~~~i~~~t 149 (342)
.....+ +.++++|++|++++++++++|++ +|+++++.+||+ ++..+.+||+||+++|+|+|++++ .+++++|
T Consensus 149 ~~~~~~-~~L~~an~l~v~~~~~l~~~F~~~~~~~y~a~v~~vdF~-~~~~~~~IN~wV~~~T~g~I~~~l--~~i~~~t 224 (436)
T cd02047 149 FRRNFG-YTLRSVNDLYIKKDFPILLDFKNNVKTYYFAEAQIADFS-DPAFITKTNNRIQKLTKGLIKEAL--ENVDPAT 224 (436)
T ss_pred hcCCCC-cEEeeeeehhhhCCCCccHHHHHHHHHHhcCceEEeCCC-CHHHHHHHHHHHHHhcCCcccccc--ccCCccc
Confidence 554445 78999999999999999999976 799999999995 566554599999999999999999 4788889
Q ss_pred eEEE---------ecc---------------CCceEEec--------ceeecCCCCeEEEEeecCCCceEEEEEeCCCCC
Q psy7902 150 NLVL---------WLP---------------STQESIII--------ITVLSSELNAHILEVPYKGGNMSMFFLLPPFAS 197 (342)
Q Consensus 150 ~lvl---------W~~---------------~~~~~~V~--------~~~~~~~~~~~vvelP~~~~~~sm~iilP~~~~ 197 (342)
.++| |+. +++.++|| .|++.++++|++++|||++ ++||+|+||++.
T Consensus 225 ~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~MM~~~~~~~y~~~~~l~~~vleLPy~~-~~SM~iiLP~~~- 302 (436)
T cd02047 225 LMMILNCIYFKGTWENKFPVEMTHNRNFRLNEKEVVKVPMMQTKGNFLAAADPELDCDILQLPYVG-NISMLIVVPHKL- 302 (436)
T ss_pred ceeeeeeeEEechhhCcCCcccccCcCCEeCCCCEEEEehhcccceEEEEEcCCcCcEEEEecCCC-CeeEEEEeCccc-
Confidence 8887 876 34566777 5677889999999999976 699999999987
Q ss_pred CCcHHHHHHHhcCCchHHHHHhhhcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCCCCCCCCCCCCCeeecceee
Q psy7902 198 QDGVGDILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLTDSHIAFGDAVH 277 (342)
Q Consensus 198 ~~~l~~l~~~L~~~~~~l~~~~~~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~~ad~s~i~~~~l~ls~v~q 277 (342)
.+|.+++++|+.. .+..|.++ |..+.++|.||||++++++||+++|++||++++|+.+|||++|++++++|++|+|
T Consensus 303 -~gL~~l~~~L~~~--~l~~~~~~-~~~~~v~v~LPKFkie~~~dL~~~L~~lGi~~lF~~~adfs~is~~~l~vs~v~h 378 (436)
T cd02047 303 -SGMKTLEKQITPQ--VVERWQKS-MTNRTREVVLPKFKLEKNYNLIESLKLMGITDLFTEKGNMAGVSDEKIAIDLFKH 378 (436)
T ss_pred -CCHHHHHHHhCHH--HHHHHHHh-CceeEEEEEeccEEEEeeecHHHHHHhcChhhhcCCcccccccCCCCeEEEeeee
Confidence 8999999999987 89999988 6889999999999999999999999999999999988999999966799999999
Q ss_pred eEEEEecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEEcCCC
Q psy7902 278 KARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVFNEPP 338 (342)
Q Consensus 278 ~~~i~v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~P~ 338 (342)
++.|+|||+|++|+|+|.+...+.+ .+..|++||||+|+|+|+.|+.|||+|+|.+|.
T Consensus 379 ka~IeVdE~GteAaa~T~~~~~~~~---~~~~f~~drPFlf~I~d~~t~~iLF~G~v~~P~ 436 (436)
T cd02047 379 QGTITVNEEGTEAAAVTTVGFMPLS---TQVRFIVDRPFLFLIYEHRTNCLLFMGRVANPS 436 (436)
T ss_pred eeEEEEcCCcccchhccccccccCC---CCcEEEeeCCEEEEEEECCCCcEEEEEEecCCC
Confidence 9999999999999999976544322 246899999999999999999999999999994
No 10
>smart00093 SERPIN SERine Proteinase INhibitors.
Probab=100.00 E-value=1.3e-67 Score=494.90 Aligned_cols=319 Identities=35% Similarity=0.592 Sum_probs=280.4
Q ss_pred HHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCC-ChHHHHHHhhHHHHHHHhhhCCCCceE
Q psy7902 4 FDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENL-DKLDTMNVYKMEKLIQGLRANADSGLT 82 (342)
Q Consensus 4 ~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~-~~~~~~~~~~~~~~l~~l~~~~~~~~~ 82 (342)
++||+++...++++|+|+||+||+.+|+|++.||+|+|++||.++||++... +..++++.|+ .++..+...+.. ..
T Consensus 1 ~~l~~~l~~~~~~~N~v~SP~si~~~L~ml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~--~l~~~l~~~~~~-~~ 77 (359)
T smart00093 1 FDLYKELAKESPDKNIFFSPVSISSALAMLSLGAKGSTATQILEVLGFNLTELSEADIHQGFQ--HLLQLLNRPDSQ-LE 77 (359)
T ss_pred ChHHHHHhccCCCCeEEEChHHHHHHHHHHHcccCchHHHHHHHHcCCCCCCCCHHHHHHHHH--HHHHHHhCCCCc-ce
Confidence 4799999887788999999999999999999999999999999999998642 2346777776 677777654444 78
Q ss_pred EEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceEEE----
Q psy7902 83 FTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL---- 153 (342)
Q Consensus 83 l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~lvl---- 153 (342)
++++|++|++++++++++|.+ +|+++++.+||++.++.+++ ||+|++++|+|+|+++++ ++++++.+++
T Consensus 78 l~~an~i~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~a~~~IN~wv~~~T~g~I~~~~~--~i~~~t~lvlvnai 155 (359)
T smart00093 78 LKTANALFVDKSLKLKDSFLEDIKKLYGAEVQSVDFSDKAEEAKKQINDWVEKKTQGKIKDLLS--DLDSDTRLVLVNAI 155 (359)
T ss_pred EEeeeeehccCCCchhHHHHHHHHHHhcCeeEEecCCCCHHHHHHHHHHHHHHhhhchHHHhcc--cCCCCceEEEEeeE
Confidence 999999999999999999976 79999999999655665666 999999999999999995 5888999887
Q ss_pred -----ecc---------------CCceEEec------c---eeecCCCCeEEEEeecCCCceEEEEEeCCCCCCCcHHHH
Q psy7902 154 -----WLP---------------STQESIII------I---TVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGDI 204 (342)
Q Consensus 154 -----W~~---------------~~~~~~V~------~---~~~~~~~~~~vvelP~~~~~~sm~iilP~~~~~~~l~~l 204 (342)
|++ +++.+.|| . |++.+++++++++|||++ +++|+|+||+++ +|.++
T Consensus 156 yFkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~~~~y~~~~~~~~~vv~Lpy~~-~~sm~iilP~~~---~l~~l 231 (359)
T smart00093 156 YFKGKWKTPFDPELTREEDFHVDETTTVKVPMMSQTGRTFNYGHDEELNCQVLELPYKG-NASMLIILPDEG---GLEKL 231 (359)
T ss_pred EEeeECCCCCCcccceecccEeCCCeEEEEeceeccCceeEEEEcCCCCcEEEEEecCC-CeeEEEEccCcc---HHHHH
Confidence 877 34456666 3 455688999999999986 799999999874 89999
Q ss_pred HHHhcCCchHHHHHhhhcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCCCCCCCCCC-CCCeeecceeeeEEEEe
Q psy7902 205 LAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLT-DSHIAFGDAVHKARLDL 283 (342)
Q Consensus 205 ~~~L~~~~~~l~~~~~~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~~ad~s~i~-~~~l~ls~v~q~~~i~v 283 (342)
+++|+.. .+..|..+ +..+.|+|+||||++++++||+++|++||++++|+..|||++|+ +++++|++|+|++.|+|
T Consensus 232 ~~~l~~~--~l~~~~~~-~~~~~v~l~lPkf~i~~~~~l~~~L~~lGl~~~F~~~adfs~i~~~~~l~vs~v~hka~ieV 308 (359)
T smart00093 232 EKALTPE--TLKKWMKS-LTKRSVELYLPKFKIEGTYDLKDVLEKLGITDLFSNKADLSGISEDKDLKVSKVLHKAVLEV 308 (359)
T ss_pred HHhhCHH--HHHHHHHh-ccceEEEEEccEEEEEEEecHHHHHHHcCcchhccCccCcccccCCCCeEEEeeeeEEEEEE
Confidence 9999987 99999988 68899999999999999999999999999999999779999999 67899999999999999
Q ss_pred cCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEEcCC
Q psy7902 284 DEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVFNEP 337 (342)
Q Consensus 284 ~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~P 337 (342)
||+|++|+|+|.+....++. +.+|++||||+|+|+|+.|+.|||+|+|.+|
T Consensus 309 dE~Gt~aaa~t~~~~~~~~~---~~~f~~drPF~f~I~~~~t~~iLF~G~v~~P 359 (359)
T smart00093 309 NEEGTEAAAATGVIAVPRSL---PPEFKANRPFLFLIRDNKTGSILFMGKVVNP 359 (359)
T ss_pred cCCCccccccccccccccCC---CceEEecCCEEEEEEECCCCeEEEEEecCCC
Confidence 99999999999865443332 3789999999999999999999999999998
No 11
>cd02058 PAI-2 Plasminogen Activator Inhibitor-2 (PAI-2). PAI-2 is a serine protease inhibitor that belongs to the ov-serpin branch of the serpin superfamily. It is is an effective inhibitor of urinary plasminogen activator (urokinase or uPA) and is involved in cell differentiation, tissue growth and regeneration.
Probab=100.00 E-value=5.2e-68 Score=500.78 Aligned_cols=331 Identities=32% Similarity=0.562 Sum_probs=288.9
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCC-ChHHHHHHhhHHHHHHHhhhCCCC
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENL-DKLDTMNVYKMEKLIQGLRANADS 79 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~-~~~~~~~~~~~~~~l~~l~~~~~~ 79 (342)
+||++||+++....+++|+|+||+||+.+|+||+.||+|+|++||.++||++... +..+++..|+ .++..+...+..
T Consensus 7 ~F~~~l~~~~~~~~~~~N~v~SP~si~~aL~~l~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~ 84 (380)
T cd02058 7 SFALNLFKKLAESSPTKNIFFSPWSISSALAMVYLGAKGNTAAQMAKVLQFNEVGGNSEDIHSGFQ--SLLSEINKPGTN 84 (380)
T ss_pred HHHHHHHHHHhhcCCCCcEEECHHHHHHHHHHHhcccCCcHHHHHHHHhCcCccccchHHHHHHHH--HHHHHHhCCCCc
Confidence 5999999999887788999999999999999999999999999999999997542 1356777776 677777655555
Q ss_pred ceEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceEEE-
Q psy7902 80 GLTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL- 153 (342)
Q Consensus 80 ~~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~lvl- 153 (342)
..++++|++|++++++++++|.+ +|++++..+||.++++.+++ ||+|++++|+|+|++++++.++++++.+++
T Consensus 85 -~~l~~~n~l~~~~~~~l~~~f~~~~~~~~~~~~~~vdF~~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~i~~~t~lvlv 163 (380)
T cd02058 85 -YLLKSANRLYGEKTYPFLEKFLQLTQKYYQAEPQAVDFVEAAEQARKEINSWVERQTEGKIQNLLPPGSVDSLTRLVLV 163 (380)
T ss_pred -cEeehhhhhhhcCCCcHhHHHHHHHHhhhcCceEEecCCCCHHHHHHHHHHHHHHhcccchhhcCCcCCCChhHHhHhh
Confidence 78999999999999999999976 79999999999766777777 999999999999999998888998998876
Q ss_pred --------ecc---------------CCceEEec--------ceeecCCCCeEEEEeecCCCceEEEEEeCCCCC--CCc
Q psy7902 154 --------WLP---------------STQESIII--------ITVLSSELNAHILEVPYKGGNMSMFFLLPPFAS--QDG 200 (342)
Q Consensus 154 --------W~~---------------~~~~~~V~--------~~~~~~~~~~~vvelP~~~~~~sm~iilP~~~~--~~~ 200 (342)
|++ +++.+.|| +|.+.+++++++++|||+++++||+||||++.. ..+
T Consensus 164 na~~Fkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~vv~LPy~~~~~sm~iiLP~~~~~~~~~ 243 (380)
T cd02058 164 NAIYFKGNWEEKFLKENTRERPFRLNKNTTKPVQMMFLKKKFPITYIEELKAQVLELPYVGKELSMFILLPDEIEDVTTG 243 (380)
T ss_pred heeEEccccCCCCCcccCCcccccCCCCceEEeechhhcCceeeEEcCCCCcEEEEccCCCCceEEEEEeccccccccch
Confidence 877 34456676 577889999999999999889999999998731 047
Q ss_pred HHHHHHHhcCCchHHHHHhh-hcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCC-CCCCCCCC-CCCeeecceee
Q psy7902 201 VGDILAALKKDPTSFKRFTE-DSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSP-GADLSRLT-DSHIAFGDAVH 277 (342)
Q Consensus 201 l~~l~~~L~~~~~~l~~~~~-~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~-~ad~s~i~-~~~l~ls~v~q 277 (342)
|.+++++|+.. .+..|.. ..++.+.++|.||||++++++||++.|++||++++|++ .|||++|+ +++++|++++|
T Consensus 244 L~~l~~~l~~~--~l~~~~~~~~~~~~~v~l~lPKF~i~~~~~l~~~L~~lGl~~~F~~~~adfs~i~~~~~l~vs~v~h 321 (380)
T cd02058 244 LEKLEKELTYE--KLNEWTSPEMMEEYEVEVYLPKFKLEESYDLKSTLSSMGMEDAFDPGKADFSGMSSANDLFLSKVFH 321 (380)
T ss_pred HHHHHHHhCHH--HHHHhhhhhcceeeEEEEEeeEEEEeeeeccHHHHHHcCccccCCcccccccCCCCCCCCcccccce
Confidence 99999999987 8988864 22578899999999999999999999999999999998 59999999 67899999999
Q ss_pred eEEEEecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEEcCC
Q psy7902 278 KARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVFNEP 337 (342)
Q Consensus 278 ~~~i~v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~P 337 (342)
++.|+|||+|++|+++|......++. ..+.+|++||||+|+|+|+.|+.|||+|+|.+|
T Consensus 322 k~~ieV~E~G~~a~a~t~~~~~~~~~-~~~~~f~~nrPF~f~I~d~~t~~iLF~G~v~~P 380 (380)
T cd02058 322 KAFVEVNEEGTEAAAATAAIMMLRCL-MPSPRFNADHPFLFFIRHNKTNTILFFGRFCSP 380 (380)
T ss_pred eeEEEECCCCcccccccchheeeccC-CCCCeEEEECCEEEEEEECCCCeEEEEEEecCC
Confidence 99999999999999998764433322 235789999999999999999999999999998
No 12
>cd02046 hsp47 Heat shock protein 47 (Hsp47), also called colligin, because of its collagen binding ability, is a chaperone specific for procollagen. It has been shown to be essential for collagen biosynthesis, but its exact function is still unclear. Hsp47 is a non-inhibitory member of the SERPIN superfamily and corresponds to clade H.
Probab=100.00 E-value=1.2e-67 Score=494.23 Aligned_cols=318 Identities=20% Similarity=0.360 Sum_probs=276.7
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCCChHHHHHHhhHHHHHHHhhhCC-CC
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGLRANA-DS 79 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~~ 79 (342)
+||++||+++...++++|+|+||+||+.+|+|++.||+|+|++||.++|+++.. ...+++..++ +++..+.... .+
T Consensus 9 ~f~~~l~~~~~~~~~~~N~v~SP~si~~aLa~l~~Ga~g~T~~ql~~~L~~~~~-~~~~~~~~~~--~l~~~l~~~~~~~ 85 (366)
T cd02046 9 GLAFNLYHAMAKDKGVENILLSPVVVASSLGLVSMGGKASTASQAKAVLSADKL-KDEHVHTGLS--ELLNEVSNSTARN 85 (366)
T ss_pred HHHHHHHHHhhccCCCCeEEEChHHHHHHHHHHHhhcCccHHHHHHHHhCCCCC-CcHHHHHHHH--HHHHHhhcCCCCC
Confidence 599999999998778899999999999999999999999999999999999743 2346777775 6666664332 34
Q ss_pred ceEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceEEE-
Q psy7902 80 GLTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL- 153 (342)
Q Consensus 80 ~~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~lvl- 153 (342)
..++++|++|++++++++++|.+ +|+++++.+||. +++.+++ ||+||+++|+|+|++++ .+++++|.+++
T Consensus 86 -~~l~~an~~~~~~~~~l~~~F~~~~~~~y~~~~~~vdF~-~~~~a~~~IN~wv~~~T~g~I~~~~--~~i~~~t~l~lv 161 (366)
T cd02046 86 -VTWKIGNRLYGPSSVSFADDFVKNSKKHYNYEHSKINFR-DKRSALNSINEWAAQTTDGKLPEVT--KDVEKTDGALIV 161 (366)
T ss_pred -cEEEEeeehhhcCCCChhHHHHHHHHHHhcCeeEEecCC-ChHHHHHHHHHHHHHhcCCchhHhh--ccCCcchHhhhh
Confidence 78999999999999999999976 799999999995 5666776 99999999999999998 56888888776
Q ss_pred --------ecc---------------CCceEEec--------ceeecCCCCeEEEEeecCCCceEEEEEeCCCCCCCcHH
Q psy7902 154 --------WLP---------------STQESIII--------ITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVG 202 (342)
Q Consensus 154 --------W~~---------------~~~~~~V~--------~~~~~~~~~~~vvelP~~~~~~sm~iilP~~~~~~~l~ 202 (342)
|++ +++.+.|| .|++.+++++++++|||++++++|+||||+++ .+|.
T Consensus 162 naiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~~~y~~~~~~~~~vl~LPy~~~~~sm~iiLP~~~--~~L~ 239 (366)
T cd02046 162 NAMFFKPHWDEKFHHKMVDNRGFMVTRSYTVSVPMMHRTGLYGYYDDEENKLQIVEMPLAHKLSSMIFIMPYHV--EPLE 239 (366)
T ss_pred heEEEcchhcCCCCHHhceeccEEeCCCeEEEhhHhhccCceeeEEeCCCCeEEEEEEcCCCcEEEEEEecCCC--CCHH
Confidence 987 34456677 55566779999999999988999999999987 7999
Q ss_pred HHHHHhcCCchHHHHHhhhcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCC-CCCCCCCC-CCCeeecceeeeEE
Q psy7902 203 DILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSP-GADLSRLT-DSHIAFGDAVHKAR 280 (342)
Q Consensus 203 ~l~~~L~~~~~~l~~~~~~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~-~ad~s~i~-~~~l~ls~v~q~~~ 280 (342)
++++.|+.+ .+..|..+ +..+.|+|.||||+++.++||+++|++||++++|++ .|||++|+ .++++|++++|++.
T Consensus 240 ~l~~~L~~~--~l~~~~~~-~~~~~v~l~lPKF~i~~~~dL~~~L~~lGi~~~F~~~~Adfs~i~~~~~l~vs~v~hka~ 316 (366)
T cd02046 240 RLEKLLTRE--QLKTWISK-MKKRAVAISLPKVSLEVSHDLQKHLGDLGLTEAIDKSKADLSKISGKKDLYLSNVFHAAA 316 (366)
T ss_pred HHHHHhCHH--HHHHHHHh-cceeEEEEEcceEEeeEEEcHHHHHHHcCCccccCCCCCCcccCCCCCceeeeeeEEEEE
Confidence 999999988 89999888 699999999999999999999999999999999986 69999999 56899999999999
Q ss_pred EEecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEE
Q psy7902 281 LDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVF 334 (342)
Q Consensus 281 i~v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v 334 (342)
|||||+|++|++++... .....+..|+|||||+|+|+|..|+.|||+|+|
T Consensus 317 ieV~E~G~~aaa~~~~~----~~~~~~~~f~~nrPF~f~I~~~~t~~iLF~G~v 366 (366)
T cd02046 317 LEWDTEGNPFDPDIYGR----EEMRNPKLFYADHPFIFLVKDNKTNSILFIGRL 366 (366)
T ss_pred EEECCCcchhhhhhhhc----ccCCCCCEEEecCCEEEEEEECCCCcEEEEEeC
Confidence 99999999987654211 112235789999999999999999999999996
No 13
>cd00172 SERPIN SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia.
Probab=100.00 E-value=2.1e-67 Score=494.55 Aligned_cols=323 Identities=35% Similarity=0.620 Sum_probs=288.4
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCCChHHHHHHhhHHHHHHHhhhCCCCc
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGLRANADSG 80 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 80 (342)
+||++||+++...++++|+|+||+||+.+|+||+.||+|+|++||.++||++.. +..+++..++ .++..+......
T Consensus 4 ~Fa~~l~~~~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~el~~~L~~~~~-~~~~~~~~~~--~~~~~l~~~~~~- 79 (364)
T cd00172 4 DFALDLYKQLAKSEPDENVVFSPLSIASALALLYLGAGGETREQLRKVLGLPSL-DDEDVHQAFK--SLLSSLKDSEKG- 79 (364)
T ss_pred hHHHHHHHHHhhcCCCCCEEEcHHHHHHHHHHHhhhcCchHHHHHHHHhCCCCC-CHHHHHHHHH--HHHHHHhCCCCC-
Confidence 599999999998767899999999999999999999999999999999999852 4567888886 777777655445
Q ss_pred eEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceEEE--
Q psy7902 81 LTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL-- 153 (342)
Q Consensus 81 ~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~lvl-- 153 (342)
..++++|++|++++++++++|.+ +|+++++.+||. +++.+++ ||+|++++|+|+|+++++++++++++.+++
T Consensus 80 ~~l~~an~~~~~~~~~~~~~f~~~~~~~~~~~~~~~dF~-~~~~a~~~IN~wv~~~T~g~I~~~~~~~~i~~~t~l~lvn 158 (364)
T cd00172 80 VELKLANRLFVQKGLTVKEDFLDLAKKYYDAEVESVDFA-NPEAAAAQINNWVEEKTNGKIKDLLSPDALDPDTRLVLVN 158 (364)
T ss_pred ceeeeehhhhhhCCCchhHHHHHHHHHHhcCeeEEEcCC-ChHHHHHHHHHHHHhhhcccchhhCCCCCCCcccceeeee
Confidence 78999999999999999999975 799999999995 4566776 999999999999999998888999999888
Q ss_pred -------ecc---------------CCceEEec--------ceeecCCCCeEEEEeecCCCceEEEEEeCCCCCCCcHHH
Q psy7902 154 -------WLP---------------STQESIII--------ITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203 (342)
Q Consensus 154 -------W~~---------------~~~~~~V~--------~~~~~~~~~~~vvelP~~~~~~sm~iilP~~~~~~~l~~ 203 (342)
|++ +++.+.|| +|++.+++++++|+|||+++++||+||||+++ .+|.+
T Consensus 159 ai~Fkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~y~~~~~l~~~vv~lpy~~~~~sm~iilP~~~--~~l~~ 236 (364)
T cd00172 159 AIYFKGKWKTPFDPELTRKRPFYVSEGESVQVPMMYQTGKFRYAEDEELDAQVLELPYKGSDLSMLIILPKEV--TGLAE 236 (364)
T ss_pred heeeeeccCCCCChhhceecccEeCCCcEEEEeCccccCcEEEEEcCccCcEEEEeecCCCceEEEEEecCCC--CcHHH
Confidence 877 34456777 67778888999999999988999999999987 79999
Q ss_pred HHHHhcCCchHHHHHhhhcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCCCCCCCCCC-CCCeeecceeeeEEEE
Q psy7902 204 ILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLT-DSHIAFGDAVHKARLD 282 (342)
Q Consensus 204 l~~~L~~~~~~l~~~~~~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~~ad~s~i~-~~~l~ls~v~q~~~i~ 282 (342)
++++|+.. .+..|.++ ++.+.|+|.||||++++++||++.|++||++++|++.+|+++|+ +++++|++|+|++.|+
T Consensus 237 l~~~l~~~--~l~~~~~~-~~~~~v~l~lPkF~i~~~~~l~~~L~~~Gl~~~F~~~a~~~~~~~~~~l~v~~v~hk~~ie 313 (364)
T cd00172 237 LEEKLSAE--KLDDLLSN-LKEREVEVTLPKFKIESSLDLKEVLQALGITDLFSPSADLSSISSDEPLYVSKVIHKAFIE 313 (364)
T ss_pred HHHhcCHH--HHHHHHHh-CCeEEEEEEeeEEEEeeeeCcHHHHHHcCCccccCCccccccCCCCCCeEEEeeeeeeEEE
Confidence 99999987 99999988 68899999999999999999999999999999999889999998 7889999999999999
Q ss_pred ecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEE
Q psy7902 283 LDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVF 334 (342)
Q Consensus 283 v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v 334 (342)
|||+|++|+++|.+..... ....+..|++||||+|+|+|+.|+.|||+|+|
T Consensus 314 vdE~Gt~aaa~t~~~~~~~-~~~~~~~f~~drPF~f~I~~~~t~~iLF~G~v 364 (364)
T cd00172 314 VNEEGTEAAAATAVSIVPR-RPSPPVEFKADRPFLFLIRDDTTGTILFLGRV 364 (364)
T ss_pred ECCCceehhcccceeeccc-cCCCCCEEEEECCEEEEEEECCCCeEEEEEEC
Confidence 9999999999998654332 12346799999999999999999999999997
No 14
>cd02056 alpha-1-antitrypsin_like alpha-1-antitrypsin_like. This family contains a variety of different members of clade A of the serpin superfamily. They include the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and noninhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia.
Probab=100.00 E-value=2.8e-67 Score=492.73 Aligned_cols=319 Identities=32% Similarity=0.503 Sum_probs=282.0
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCC-ChHHHHHHhhHHHHHHHhhhCCCC
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENL-DKLDTMNVYKMEKLIQGLRANADS 79 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~-~~~~~~~~~~~~~~l~~l~~~~~~ 79 (342)
+||++||+++....+++|+|+||+||+.+|+||+.||+|+|++||.++||++... +..+++..|+ .++..+.....+
T Consensus 4 ~F~~~l~~~~~~~~~~~N~v~SP~si~~~L~ml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~--~l~~~l~~~~~~ 81 (361)
T cd02056 4 DFAFRLYRQLASESPSKNIFFSPVSISTALAMLSLGARSSTLAQILEGLGFNLTEISEEEIHQGFQ--HLLHLLNQPDSG 81 (361)
T ss_pred HHHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHCccchhHHHHHHHHhcCCccCCCHHHHHHHHH--HHHHHHcCCCCc
Confidence 5999999999887788999999999999999999999999999999999997542 3456778786 777777655445
Q ss_pred ceEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceEEE-
Q psy7902 80 GLTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL- 153 (342)
Q Consensus 80 ~~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~lvl- 153 (342)
..+.++|++|++++++++++|.+ +|+++++.+||. +++.+++ ||+|++++|+|+|+++++ ++++++.+++
T Consensus 82 -~~l~~an~l~~~~~~~~~~~f~~~~~~~y~~~~~~~dF~-~~~~~~~~IN~wv~~~T~g~I~~~~~--~i~~~t~lvlv 157 (361)
T cd02056 82 -LQLNMGNALFLDKRLKPLDKFLEDVKHLYESEAFSTDFQ-DSAEAKKQINDYVEKKTHGKIVDLVK--DLDSDTVMVLV 157 (361)
T ss_pred -ceEEeeeehhhhCCCChhHHHHHHHHHHhcCceEeeCCC-ChHHHHHHHHHHHHHHhhhhHHhhcC--CCCCCceEEEE
Confidence 78999999999999999999976 899999999995 6666666 999999999999999994 6888999887
Q ss_pred --------ecc---------------CCceEEec--------ceeecCCCCeEEEEeecCCCceEEEEEeCCCCCCCcHH
Q psy7902 154 --------WLP---------------STQESIII--------ITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVG 202 (342)
Q Consensus 154 --------W~~---------------~~~~~~V~--------~~~~~~~~~~~vvelP~~~~~~sm~iilP~~~~~~~l~ 202 (342)
|++ +++.+.|| +|++.+++++++|+|||++ +++|+||||+++ +|.
T Consensus 158 na~~Fk~~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~y~~~~~l~~~~veLPy~~-~~sm~iiLP~~~---~l~ 233 (361)
T cd02056 158 NYIYFKGKWEKPFDPELTQEEDFFVDEKTTVKVPMMHQTGRYDYLHDSELSCTVVQMPYKG-NATAFFVLPDEG---KMK 233 (361)
T ss_pred EEEeeeehccCCCCcccCcccCCEeCCCcEEEeecccccCcEeeEEcCCCCcEEEEEecCC-CcEEEEEecCcc---hHH
Confidence 876 34456666 5777888999999999965 699999999874 799
Q ss_pred HHHHHhcCCchHHHHHhhhcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCCCCCCCCCC-CCCeeecceeeeEEE
Q psy7902 203 DILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLT-DSHIAFGDAVHKARL 281 (342)
Q Consensus 203 ~l~~~L~~~~~~l~~~~~~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~~ad~s~i~-~~~l~ls~v~q~~~i 281 (342)
++++.|+.+ .+.+|... +..+.|+|+||||++++++||+++|++||++++|+..|||++|+ +++++|++|+|++.|
T Consensus 234 ~l~~~l~~~--~l~~~~~~-~~~~~v~v~lPkF~i~~~~~l~~~L~~~Gi~~~F~~~adfs~i~~~~~l~vs~v~qk~~i 310 (361)
T cd02056 234 QVEAALSRD--TLKKWSKL-LSKRSVDLYLPKFSISGTYNLKDILPKMGITDVFSDKADLSGITEQPNLKVSKAVHKAVL 310 (361)
T ss_pred HHHHhhCHH--HHHHHHHh-CceeEEEEEeeeEEEeeeechHHHHHhcChhhhcCCcCCccccCCCCCEEEEeeeeeeEE
Confidence 999999988 99999988 69999999999999999999999999999999998789999999 688999999999999
Q ss_pred EecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEE
Q psy7902 282 DLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVF 334 (342)
Q Consensus 282 ~v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v 334 (342)
+|||+|++|+|+|.+....++. .+.+|+|||||+|+|+|+.|+.|||+|+|
T Consensus 311 ev~E~Gt~aaa~t~~~~~~~~~--~~~~f~~drPF~f~I~~~~t~~iLF~G~v 361 (361)
T cd02056 311 DVDEKGTEAAAATGVEITPMSA--LPPILKFNRPFLLLIFDRTTESILFLGKV 361 (361)
T ss_pred EEcCCCcccccccchhhhcccC--CCCEEEEeCCEEEEEEECCCCcEEEEEeC
Confidence 9999999999999865443332 45789999999999999999999999997
No 15
>PF00079 Serpin: Serpin (serine protease inhibitor); InterPro: IPR023796 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively. In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. Serpins (SERine Proteinase INhibitors) [, , ] belong to MEROPS inhibitor family I4, clan ID. Serpins are proteins that are primarily known as irreversible serine protease inhibitors active against S1 (IPR001254 from INTERPRO), S8 (IPR000209 from INTERPRO) and C14 (IPR002398 from INTERPRO) peptidases. There are both extra- and intra-cellular serpins, which are found in all groups of organisms with the notable exception of fungi [, ]. In contrast to "rigid" proteinase inhibitors, such as those of the Kunitz or Kazal families, the serpins are metastable proteins (active-state proteins) which interact with their substrate and irreversibly trap the acyl intermediate as a result of a major conformational change []; they are best described as suicide substrate inhibitors. The common structure of these proteins is a multi-domain fold containing a bundle of 8 or 9 alpha helices and a beta sandwich formed by 3 beta sheets. The reactive centre loop (RCL) is found in the C-terminal part of these proteins. Serpins and their homologues are a group of high molecular weight (40 to 50 kDa) structurally related proteins involved in a number of fundamental biological processes such as blood coagulation, complement activation, fibrinolysis, angiogenesis, inflammation, tumour suppression and hormone transport. All known serpins have been classified into 16 clades and 10 orphan sequences; the vertebrate serpins can be conveniently classified into six sub-groups []. In human plasma they represent approximately 2% of the total protein, of which 70% is alpha-1-antitrypsin. On the basis of strong sequence similarities, a number of proteins with no known inhibitory activity also belong to this family, these include: angiotensinogen, corticosteroid-binding globulin and thyroxin-binding globulin []. This entry represents the structural domain of serpins. It consists of a cluster of helices and a beta-sandwich.; PDB: 3PZF_A 3B9F_I 1MTP_A 1SNG_A 1ANT_I 2ZNH_B 1BR8_I 1SR5_A 1E03_L 1AZX_L ....
Probab=100.00 E-value=1.1e-66 Score=491.20 Aligned_cols=325 Identities=34% Similarity=0.639 Sum_probs=290.8
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCCChHHHHHHhhHHHHHHHhhh-CCCC
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGLRA-NADS 79 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~ 79 (342)
+||++||+.+....+++|+|+||+||+.+|+||+.||+|+|++||.++||++.. +..+++..|+ .++..+.. ....
T Consensus 5 ~f~~~L~~~~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~-~~~~~~~~~~--~l~~~l~~~~~~~ 81 (371)
T PF00079_consen 5 QFALKLFKALSKSNPDENFVFSPLSIYSALAMLYLGASGETRKELRKVLGLPGS-DDEEIHEYFK--KLLQSLNSSPSDN 81 (371)
T ss_dssp HHHHHHHHHHHHHSTTSSEEE-HHHHHHHHHHHHHTSCHHHHHHHHHHTTCTTS-THHHHHHHHH--HHHHHHHSCSTSS
T ss_pred HHHHHHHHHHHhhCCCCcEEEChHHHHHHHHHHHhhccCCHHHHHHHHhhhccc-ccccchhhhh--hhhhhhhcccccc
Confidence 599999999999888999999999999999999999999999999999999864 5677888887 77788876 4445
Q ss_pred ceEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceEEE-
Q psy7902 80 GLTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL- 153 (342)
Q Consensus 80 ~~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~lvl- 153 (342)
..++++|++|++++++++++|.+ +|+++++.+||. ++..+++ ||+|++++|+|+|+++++++++++++.+++
T Consensus 82 -~~~~~~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~df~-~~~~~~~~IN~wv~~~T~g~I~~~v~~~~i~~~t~~vli 159 (371)
T PF00079_consen 82 -PQLKLANKLFVDKNLPLKPEFKKTLKKYFNAEVESVDFS-DPPQAAKEINKWVSEKTNGKIKNLVSPNDIDPDTRLVLI 159 (371)
T ss_dssp -SEEEEEEEEEEETTSEBEHHHHHHHHHHHSEEEEEEETT-SHHHHHHHHHHHHHHHTTTSSSTSSSTTSSSTTEEEEEE
T ss_pred -ccceeeeeeecccccccccccchhhhhcccccccccccc-ccchhhhhhcchhhhhccceeeccccccchhhHHHHhhc
Confidence 88999999999999999999976 799999999995 4554666 999999999999999998888999999988
Q ss_pred --------ecc---------------CCceEEec--------ceeecCCCCeEEEEeecCCCceEEEEEeCCCCCCCcHH
Q psy7902 154 --------WLP---------------STQESIII--------ITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVG 202 (342)
Q Consensus 154 --------W~~---------------~~~~~~V~--------~~~~~~~~~~~vvelP~~~~~~sm~iilP~~~~~~~l~ 202 (342)
|+. +++.+.|+ +|++.+++++++|+|||++ +++|+||||+++ .+|.
T Consensus 160 na~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~~l~~~~v~Lp~~~-~~sm~iilP~~~--~~l~ 236 (371)
T PF00079_consen 160 NAIYFKGKWKYPFDPENTEKRPFYVSDGKSVSVPMMHQSGRFRYAEDEDLDAQVVELPYKG-NFSMLIILPDEG--DGLD 236 (371)
T ss_dssp EEEEEEEEBSSTEEGGGEEEEEEECSSSEEEEEEEEEEEEEEEEEEETTTTEEEEEEEBST-SEEEEEEEESST--TTHH
T ss_pred ccccccccccccccccccccccccccccccceEEEEecccccccccccccceeEEEecccc-ceeeEEEEeccc--cchh
Confidence 876 34555666 6777889999999999966 999999999987 7899
Q ss_pred HHHHHhcCCchHHHHHhhhcCCCeeEE--EEeeeeEEeeccchHHHHhhCCCccCCC-CCCCCCCCC-CCCeeecceeee
Q psy7902 203 DILAALKKDPTSFKRFTEDSQNLKPVE--IAIPKFSLTQEMNLIPTLSDLGVKDLFS-PGADLSRLT-DSHIAFGDAVHK 278 (342)
Q Consensus 203 ~l~~~L~~~~~~l~~~~~~~l~~~~v~--l~lPkF~i~~~~dl~~~L~~lG~~~~F~-~~ad~s~i~-~~~l~ls~v~q~ 278 (342)
+++++|+.. .+..|+++ ++.+.++ |.||||++++++||++.|++||++++|+ ..|||++|+ +++++|++++|+
T Consensus 237 ~l~~~l~~~--~l~~~~~~-~~~~~~~~~l~lPkf~i~~~~dl~~~L~~lGi~~~F~~~~adfs~i~~~~~~~v~~v~qk 313 (371)
T PF00079_consen 237 ELEKKLTSE--RLQEIISN-LKMRKVDEELSLPKFKIESSIDLKELLKKLGIKDLFDPDSADFSGISDDEPLYVSDVIQK 313 (371)
T ss_dssp HHHHHHSHH--HHHHHHHH-CEEEEEEEEEEEEEEEEEEEEEHHHHHHHTTTTGGGSTTTSSCTTTBSSSTEEEEEEEEE
T ss_pred hhhhhcccc--cccccccc-cccccccceeeecccccccccccceeeehhhcccccccccccccccccceeeeeeeccce
Confidence 999999988 89999999 6888888 9999999999999999999999999999 479999999 899999999999
Q ss_pred EEEEecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEEcCC
Q psy7902 279 ARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVFNEP 337 (342)
Q Consensus 279 ~~i~v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~P 337 (342)
+.|+|||+|++|+|+|.+ .........+.+|++||||+|+|+|+.||.|||+|+|.||
T Consensus 314 ~~i~v~E~G~~a~a~t~~-~~~~~~~~~~~~f~~drPF~f~I~~~~t~~iLF~G~v~~P 371 (371)
T PF00079_consen 314 AVIEVDEEGTEAAAATAV-MASISSPPPPIEFIADRPFLFFIRDRSTGSILFMGKVVDP 371 (371)
T ss_dssp EEEEEESSEEEEEEEEEE-EEEESSSSSSEEEECSSEEEEEEEETTTTEEEEEEEESST
T ss_pred eeeccccccccccccccc-cccccccccCcEEEEcCCEEEEEEECCCCcEEEEEEecCC
Confidence 999999999999999943 2333345578999999999999999999999999999999
No 16
>cd02049 bacterial_SERPIN SERine Proteinase INhibitors (serpins), prokaryotic subgroup. Little information about specific functions is available for this subgroup, most likely they are inhibitory members of the serpin superfamily. In general, serpins exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors.
Probab=100.00 E-value=7.3e-67 Score=490.23 Aligned_cols=321 Identities=26% Similarity=0.487 Sum_probs=281.7
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCCChHHHHHHhhHHHHHHHhhhCCCCc
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGLRANADSG 80 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 80 (342)
+||++||+++....+++|+|+||+||+.+|+||+.||+|+|++||.++||++.. +..+++..++ .++..+...+.+
T Consensus 7 ~F~~~l~~~~~~~~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~ql~~~L~~~~~-~~~~~~~~~~--~l~~~l~~~~~~- 82 (364)
T cd02049 7 RFGFKLFSELNKEDVEKNIFISPLSIALALSMTYNGADGTTRKEMLKALGLDNI-DLEDLNSALA--TLMDQLNTHDKT- 82 (364)
T ss_pred HHHHHHHHHHhhcCCCCCEEECHHHHHHHHHHHhhhcCchHHHHHHHHhCCCCC-CHHHHHHHHH--HHHHHHhcCCCC-
Confidence 599999999988778899999999999999999999999999999999999854 4557777776 666666554445
Q ss_pred eEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceEEE--
Q psy7902 81 LTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL-- 153 (342)
Q Consensus 81 ~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~lvl-- 153 (342)
..++++|++|++++++++++|.+ +|+++++.+||. ++. +++ ||+|++++|+|+|++++. .++++|.+++
T Consensus 83 ~~l~~an~i~~~~~~~~~~~f~~~~~~~~~~~v~~~dF~-~~~-a~~~IN~wv~~~T~g~I~~~~~--~i~~~t~lvlvn 158 (364)
T cd02049 83 VELIIANSIWIEPGFTLKPDFLQTIKDYYQAYVLELDFQ-SPA-AAEEINRWVKEKTKGKIDKIVD--KIDPDDVMFLIN 158 (364)
T ss_pred cEEEeehhhHhhCCCCccHHHHHHHHHhhcccceeeCCC-CHH-HHHHHHHHHHHhhcChHHHhcC--CCCCCceEEEEe
Confidence 78999999999999999999976 899999999995 565 555 999999999999999995 4889999887
Q ss_pred -------ecc---------------CCceEEec------ceeecCCCCeEEEEeecCCCceEEEEEeCCCCCCCcHHHHH
Q psy7902 154 -------WLP---------------STQESIII------ITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGDIL 205 (342)
Q Consensus 154 -------W~~---------------~~~~~~V~------~~~~~~~~~~~vvelP~~~~~~sm~iilP~~~~~~~l~~l~ 205 (342)
|++ +++.+.|| .|.|.+..++++++|||++++++|+||||++. .+|.+++
T Consensus 159 a~~fk~~W~~~F~~~~T~~~~F~~~~~~~~~v~mM~~~~~~~y~~~~~~~~l~Lpy~~~~~sm~iiLP~~~--~~l~~l~ 236 (364)
T cd02049 159 AVYFKGDWQEPFDKQSTYEAPFYLPDGSTKEVPFMSRTGNFRYLETPGFQAVRLPYGDGRLSMYVFLPKEN--VSLREFV 236 (364)
T ss_pred eEEEeeeecCCCChhhcccCcCCCCCCCEEECcccCCcCcEeeEEcCCCeEEEeecCCCcEEEEEEecCCC--CCHHHHH
Confidence 887 34456676 45566666789999999888999999999997 7999999
Q ss_pred HHhcCCchHHHHHhhhcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCC-CCCCCCCCCCCeeecceeeeEEEEec
Q psy7902 206 AALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSP-GADLSRLTDSHIAFGDAVHKARLDLD 284 (342)
Q Consensus 206 ~~L~~~~~~l~~~~~~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~-~ad~s~i~~~~l~ls~v~q~~~i~v~ 284 (342)
++|+.. .+.+|..+ +..+.|+|.||||++++++||+++|++||++++|++ .+||+++++++++|++++|++.|+||
T Consensus 237 ~~l~~~--~~~~~~~~-~~~~~v~v~lPkF~i~~~~~L~~~L~~mGi~~~F~~~~a~~s~~~~~~l~vs~v~hka~iev~ 313 (364)
T cd02049 237 KTLTAE--KWRKWIEQ-FRMREGSLSLPRFQLEYEIELRDALKALGMEEAFTPDAADFSKLGEGNLYISKVIHKTFIEVN 313 (364)
T ss_pred HHhCHH--HHHHHHHh-CceeEEEEEeeeEEccceechHHHHHHCcccccCCCCcCCCCCCCCCCeEEEeeeeeEEEEEc
Confidence 999987 89999988 699999999999999999999999999999999997 69999998668999999999999999
Q ss_pred CCCccccccchhhhcccCCC-CCCceEEecCCeEEEEEeCCCCcEEEEEEE
Q psy7902 285 EQGTTAAAATAVFAFRSSRP-LEPVRYEANHPFLYFLVDKEIQSILFAGVF 334 (342)
Q Consensus 285 E~G~~a~a~t~~~~~~~~~~-~~~~~f~~drPFlf~I~~~~t~~ilf~G~v 334 (342)
|+|++|+|+|.+.....+.+ ..+.+|++||||+|+|+|+.|+.|||+|+|
T Consensus 314 E~G~~a~a~t~~~~~~~~~~~~~~~~f~~nrPF~f~I~d~~t~~iLF~G~v 364 (364)
T cd02049 314 EEGTEAAAATSVEITETSAPAGEPFTMVADRPFLFAIRDNRTGSILFMGAV 364 (364)
T ss_pred cCceeecccceeeeeeccCCCCCCceEEeeCCEEEEEEECCCCcEEEEEeC
Confidence 99999999988654433322 345789999999999999999999999996
No 17
>cd02051 PAI-1_nexin-1 Plasminogen activator inhibitor-1_like. Plasminogen activator inhibitor-1 (PAI-1) is the primary, fast-acting inhibitor of plasminogen activators. It is often bound to vitronectin, an abundant component of the extracellular matrix in many tissues. Protease nexin-1 is a potent serpin able to inhibit thrombin, plasmin, and plasminogen activators. PAI-1 and nexin-1 are members of the serpin superfamily and represent clade E. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones.
Probab=100.00 E-value=5.3e-67 Score=492.71 Aligned_cols=322 Identities=27% Similarity=0.479 Sum_probs=279.6
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCCChHHHHHHhhHHHHHHHhhhCCCCc
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGLRANADSG 80 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 80 (342)
+||++||+++....+++|+++||+||+.+|+||+.||+|+|+.||.++||++. .++.+.++ .+...+......
T Consensus 13 ~F~~~l~~~~~~~~~~~N~v~SP~si~~~L~~l~~GA~g~T~~el~~~L~~~~----~~~~~~~~--~l~~~l~~~~~~- 85 (377)
T cd02051 13 DFGIQVFNQVAQARPQENVVVSPHGIASVLGMLQLGADGKTKKQLQTVMRYKI----NGVAKALK--KLNKAIVSKKNK- 85 (377)
T ss_pred HHHHHHHHHHHhcCCCCcEEECcHHHHHHHHHHHhhcCCcHHHHHHHHhCCCh----hHHHHHHH--HHHHHHhccCCc-
Confidence 59999999998878899999999999999999999999999999999999974 34555554 555556444334
Q ss_pred eEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCC-CCCCCceEEE-
Q psy7902 81 LTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATG-QVNSRTNLVL- 153 (342)
Q Consensus 81 ~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~-~i~~~t~lvl- 153 (342)
..++++|++|++++++++++|.+ +|+++++.+||. +++.+++ ||+|++++|+|+|++++.+. .++++|.+++
T Consensus 86 ~~l~~an~i~~~~~~~l~~~f~~~~~~~f~a~~~~vdF~-~~~~a~~~IN~Wv~~~T~g~I~~~l~~~~~i~~~t~l~lv 164 (377)
T cd02051 86 DIVTTANAVFAQSGFKMEVPFVPRNKEVFQCEVKSVDFS-DPETAAFSINDWVKNETKGMIDNLLSPDLADDALTRLVLV 164 (377)
T ss_pred cchHHHHHHHhcCCCchhHHHHHHHHHHhcCeeEEECCC-CHHHHHHHHHHHHHHhcCCCccccCCCCCCCCccceEEEE
Confidence 67899999999999999999975 799999999995 6777777 99999999999999999876 6788888887
Q ss_pred --------ecc---------------CCceEEec--------ceeecC---CCCeEEEEeecCCCceEEEEEeCCCCCCC
Q psy7902 154 --------WLP---------------STQESIII--------ITVLSS---ELNAHILEVPYKGGNMSMFFLLPPFASQD 199 (342)
Q Consensus 154 --------W~~---------------~~~~~~V~--------~~~~~~---~~~~~vvelP~~~~~~sm~iilP~~~~~~ 199 (342)
|++ +++.+.|| +|++.+ ++++++++|||+++++||+|+||++. ..
T Consensus 165 nai~Fkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~~~~vv~LPy~~~~~sm~iiLP~~~-~~ 243 (377)
T cd02051 165 NALYFKGLWKSRFQPESTKKRTFHAGDGKTYQVPMLAQLSVFRSGSASTPNGLWYNIIELPYHGESISMLIALPTEK-ST 243 (377)
T ss_pred eeeEeeeeecCCCChhhCcccccCcCCCcEEeehhhcccCceeeEeeccccccccEEEEEecCCCeEEEEEEecccc-CC
Confidence 887 34456677 344433 35689999999989999999999865 24
Q ss_pred cHHHHHHHhcCCchHHHHHhhhcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCC-CCCCCCCC-CCCeeecceee
Q psy7902 200 GVGDILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSP-GADLSRLT-DSHIAFGDAVH 277 (342)
Q Consensus 200 ~l~~l~~~L~~~~~~l~~~~~~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~-~ad~s~i~-~~~l~ls~v~q 277 (342)
+|.+++++|+.+ .+..|.+. ++.+.|+|.||||++++++||++.|++||++++|++ .|||++|+ .++++|++++|
T Consensus 244 ~L~~l~~~l~~~--~l~~~~~~-~~~~~v~v~lPkF~i~~~~~L~~~L~~lGl~~~F~~~~Adfs~i~~~~~l~v~~v~h 320 (377)
T cd02051 244 PLSAIIPHISTK--TIQSWMGT-MVPKRMQLVLPKFTVEAETDLKEPLKALGITDMFDQSKANFTKISRSESLHVSHALQ 320 (377)
T ss_pred CHHHHHHhcCHH--HHHHHHHh-CCceEEEEEccCEEEEEecChHHHHHHCCCcccccCCCCCcccccCCCCEEEEeEEE
Confidence 799999999987 89999888 689999999999999999999999999999999997 79999999 67899999999
Q ss_pred eEEEEecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEEcCC
Q psy7902 278 KARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVFNEP 337 (342)
Q Consensus 278 ~~~i~v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~P 337 (342)
++.|+|||+|++|+|+|.+....++. +.+|++||||+|+|+|+.|+.|||+|+|.+|
T Consensus 321 ka~iev~E~Gt~aaa~t~~~~~~~~~---~~~f~~drPF~f~I~~~~t~~~LF~G~v~~P 377 (377)
T cd02051 321 KAKIEVNEDGTKASAATTAILIARSS---PPWFIVDRPFLFFIRHNPTGTILFMGQINKP 377 (377)
T ss_pred EEEEEECCCccchhhhcceeeeccCC---CCeEEeeCCEEEEEEeCCCCcEEEEEEecCC
Confidence 99999999999999998764443332 4689999999999999999999999999998
No 18
>cd02052 PEDF Pigment epithelium-derived factor (PEDF)_like. PEDF is non-inhibitory member of the Serpin superfamily. It exhibits neurotrophic, neuroprotective and antiangiogenic properties and is widely expressed in the developing and adult nervous systems. This subgroup corresponds to clade F1 of the serpin superfamily.
Probab=100.00 E-value=1.1e-66 Score=489.09 Aligned_cols=316 Identities=25% Similarity=0.460 Sum_probs=276.4
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCCChHHHHHHhhHHHHHHHhhhCCCCc
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGLRANADSG 80 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 80 (342)
+||++||+++....+++|+++||+||+.+|+||+.||+|+|++||.++||++.. +..++++.++ +++..+...+
T Consensus 21 ~Fa~~l~~~l~~~~~~~Nvv~SP~si~~~L~ml~~GA~g~T~~ql~~~L~~~~~-~~~~~~~~~~--~l~~~l~~~~--- 94 (374)
T cd02052 21 NFGYDLYRQQASRDPTANVFLSPLSIATALSQLSLGAGERTESQIHRALYYDLL-NDPELHDTYK--DLLASLTAPA--- 94 (374)
T ss_pred HHHHHHHHHHhccCCCCcEEEChHHHHHHHHHHHhccChHHHHHHHHHhCCCCC-ChHHHHHHHH--HHHHHhcCCC---
Confidence 599999999998778899999999999999999999999999999999999753 3456788886 7777775432
Q ss_pred eEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceEEE--
Q psy7902 81 LTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL-- 153 (342)
Q Consensus 81 ~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~lvl-- 153 (342)
..++++|++|++++++++++|.+ .|+++++.+|| + ++ +++ ||+|++++|+|+|+++++ ++++++.+++
T Consensus 95 ~~l~~an~i~v~~~~~l~~~f~~~~~~~~~~~~~~~~~-~-~~-~~~~IN~wv~~~T~g~I~~~l~--~i~~~t~l~lvN 169 (374)
T cd02052 95 KGLKSASRILLERKLRLRLEFVNQVEKSYGERPRILAG-N-AL-DLQEINDWVQQQTGGKVDRFVK--EIPRNVSILLLG 169 (374)
T ss_pred ccchhhhHHHHhCCCchhHHHHHHHHHHhhCccccccC-C-HH-HHHHHHHHHHHhhcCcHHHhCC--CCCCccceEEEe
Confidence 45899999999999999999975 78999999998 3 33 455 999999999999999995 5888899887
Q ss_pred -------ecc---------------CCceEEec---------ceeecCCCCeEEEEeecCCCceEEEEEeCCCCCCCcHH
Q psy7902 154 -------WLP---------------STQESIII---------ITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVG 202 (342)
Q Consensus 154 -------W~~---------------~~~~~~V~---------~~~~~~~~~~~vvelP~~~~~~sm~iilP~~~~~~~l~ 202 (342)
|++ ++++++|| +|++.+++++++|+|||++ ++||+||||++. ..+|.
T Consensus 170 a~yFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~y~~~~~~~~~vveLPy~~-~~sm~iiLP~~~-~~~L~ 247 (374)
T cd02052 170 SAYFKGQWITKFDKRNTVLTDFHLDEQRTVVVPMMSDPNAPVRYGLDSDLNCKIAQLPLTG-GVSIMFFLPDKV-TQNLT 247 (374)
T ss_pred eEEEechhcCCCCcccCccccEEcCCCcEEEEEeeccCCcceeeEEcCCCCcEEEEEecCC-CeEEEEEecCCC-CCCHH
Confidence 876 34556676 5677888999999999976 799999999875 12699
Q ss_pred HHHHHhcCCchHHHHHhhhcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCCCCCCCCCCCCCeeecceeeeEEEE
Q psy7902 203 DILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLTDSHIAFGDAVHKARLD 282 (342)
Q Consensus 203 ~l~~~L~~~~~~l~~~~~~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~~ad~s~i~~~~l~ls~v~q~~~i~ 282 (342)
.++++|+.+ .++.|..+ ++.+.|+|.||||+++.++||+++|++||++++|+. |||++|++.+++|++|+|++.|+
T Consensus 248 ~l~~~l~~~--~~~~~~~~-~~~~~v~v~lPKF~i~~~~~l~~~L~~lGl~~~F~~-adfs~i~~~~l~v~~v~hk~~ie 323 (374)
T cd02052 248 LIEESLTSE--FVHDIDRE-LKTVKAVLTLPKLKLSYETELLPSLQELKLQSLFAS-PDFTKITSKPIKLSHVHHKAVLE 323 (374)
T ss_pred HHHhhcCHH--HHHHHHHh-CeEEEEEEECccEEEEEEechHHHHHhcCCcccccc-cchhhccccceEeEeeEEEEEEE
Confidence 999999987 88888887 689999999999999999999999999999999996 99999996579999999999999
Q ss_pred ecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEEcCC
Q psy7902 283 LDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVFNEP 337 (342)
Q Consensus 283 v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~P 337 (342)
|||+|++|+|+|.+... .+ .+.+|++||||+|+|+|+.|+.|||+|+|.+|
T Consensus 324 VdE~Gt~aaa~t~~~~~-~~---~~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P 374 (374)
T cd02052 324 LNEDGAETAPTPGSATA-LT---FPLEYHVDRPFLFVLRDEDTGALLFIGKVLDP 374 (374)
T ss_pred ECCCccccccccccccc-cC---CCeEEEeeCCEEEEEEECCCCcEEEEEEecCC
Confidence 99999999999975432 11 35789999999999999999999999999998
No 19
>cd02043 plant_SERPIN SERine Proteinase INhibitors (serpins), plant specific subgroup. It has been suggested that plant serpins play a role in defense against insect predators. This subgroup corresponds to clade P of the serpin superfamily. In general, serpins exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones.
Probab=100.00 E-value=2.8e-66 Score=488.73 Aligned_cols=328 Identities=29% Similarity=0.468 Sum_probs=276.3
Q ss_pred ChHHHHHHHHhhcC-CCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCCChHHHHHHhhHHHHHHHhhh---C
Q psy7902 1 EFTFDLLTVLNNAN-KGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGLRA---N 76 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~-~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~~~~~~~~~~~~~~~l~~l~~---~ 76 (342)
+||++||+++.... +++|+|+||+||+.+|+||+.||+|+|++||.++||++. ..+++..++ .+...+.. .
T Consensus 5 ~~~~~l~~~~~~~~~~~~N~v~SP~si~~aL~ml~~GA~g~T~~ql~~~L~~~~---~~~~~~~~~--~l~~~~~~~~~~ 79 (381)
T cd02043 5 LVAMRLSGHVAAAAGKGSNVIFSPLSINVALSLVAAGARGETLDQLLSFLGSPS---TDELHAVAA--SIVDLVLADASA 79 (381)
T ss_pred HHHHHHHHHHhccCCCCCcEEECHHHHHHHHHHHhcccCCcHHHHHHHHhCCCC---hHHHHHHHH--HHHHHHhhhccc
Confidence 49999999999874 789999999999999999999999999999999999973 345666665 55554432 1
Q ss_pred CCCceEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceE
Q psy7902 77 ADSGLTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNL 151 (342)
Q Consensus 77 ~~~~~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~l 151 (342)
... ..++++|++|++++++++++|.+ +|+++++.+||.++++.+++ ||+||+++|+|+|++++++.+++++|.+
T Consensus 80 ~~~-~~l~~an~l~~~~~~~~~~~f~~~~~~~y~~~~~~vdF~~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~i~~~t~l 158 (381)
T cd02043 80 SGG-PRLSFANGVWVDKSLSLKPSFKDLAANSYKAEARPVDFRTKAEEVRREVNSWVEKATNGLIKDILPPGSVDSSTKL 158 (381)
T ss_pred CCC-cEEehhhhHHHhCCCCcCHHHHHHHHhhhhccceeecCCCCHHHHHHHHHHHHHHHhcChHHhhCCCCCcCCCceE
Confidence 224 67999999999999999999976 79999999999767787777 9999999999999999988899999998
Q ss_pred EE---------ecc---------------CCceEEec------ceeecCCCCeEEEEeecCCC------ceEEEEEeCCC
Q psy7902 152 VL---------WLP---------------STQESIII------ITVLSSELNAHILEVPYKGG------NMSMFFLLPPF 195 (342)
Q Consensus 152 vl---------W~~---------------~~~~~~V~------~~~~~~~~~~~vvelP~~~~------~~sm~iilP~~ 195 (342)
++ |++ +++++.|| .+.+....++++|+|||+++ ++||+||||++
T Consensus 159 ~lvnai~Fkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~~~~~~~~~~~~veLPy~~~~~~~~~~~sm~iiLP~~ 238 (381)
T cd02043 159 VLANALYFKGAWSSKFDASDTKDRDFHLLDGTSVRVPFMSSEKDQYVAAFDGFKVLRLPYKRGGHDDARQFSMYIYLPDK 238 (381)
T ss_pred EEEeeeEEeeeeccCCccccCccccceeCCCCeEEeeeeeccCcccccccCCCEEEEcCCCCCCCCCCCcEEEEEEccCC
Confidence 87 886 34455666 22333334699999999765 59999999998
Q ss_pred CCCCcHHHHHHHhcCCchHHHHHhhhcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCCCCCCCCCC---CCCeee
Q psy7902 196 ASQDGVGDILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLT---DSHIAF 272 (342)
Q Consensus 196 ~~~~~l~~l~~~L~~~~~~l~~~~~~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~~ad~s~i~---~~~l~l 272 (342)
. .+|.+++++|+..++.+..|... ++.+.++|.||||++++++||+++|++||++++|++.++++++. .++++|
T Consensus 239 ~--~~L~~l~~~l~~~~~~~~~~~~~-~~~~~v~l~lPKF~i~~~~dl~~~L~~mGl~~~F~~~~~~~~~~~~~~~~l~v 315 (381)
T cd02043 239 K--DGLADLLEKLVSEPGFLDRHIPA-SEQEVGAFMIPKFKFSFGFEASEVLKKLGLTLPFDPGGALLSMSSPEGENLYV 315 (381)
T ss_pred C--CCHHHHHHhhccChhhhhhhccc-ceeeEEEEEcccEEEEeecchHHHHHHCCCccccCCccccccCccCCCCCeeE
Confidence 7 79999999997652236666666 57788999999999999999999999999999999867777764 367999
Q ss_pred cceeeeEEEEecCCCccccccchhhhcccCC-CCCCceEEecCCeEEEEEeCCCCcEEEEEEEcCC
Q psy7902 273 GDAVHKARLDLDEQGTTAAAATAVFAFRSSR-PLEPVRYEANHPFLYFLVDKEIQSILFAGVFNEP 337 (342)
Q Consensus 273 s~v~q~~~i~v~E~G~~a~a~t~~~~~~~~~-~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~P 337 (342)
++|+|++.|+|||+|++|+|+|.+.....+. +..+.+|++||||+|+|+|+.|+.|||+|+|.+|
T Consensus 316 s~v~hka~ieVdE~Gt~aaa~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~iLF~G~v~~P 381 (381)
T cd02043 316 SSVYHKACVEVDEEGTEAAAATAVVMSGTSSPPPRPVDFVADHPFLFLIREDKTGVVLFLGQVMNP 381 (381)
T ss_pred EeeeeEEEEEECCCcceehhccceeeccccCCCCCCceEEecCCEEEEEEECCCCcEEEEEEecCC
Confidence 9999999999999999999999865443332 2345789999999999999999999999999998
No 20
>cd02055 PZI Protein Z-dependent protease inhibitor (ZPI) is a member of the serpin superfamily of proteinase inhibitors (clade A10). ZPI inhibits coagulation factor Xa , dependent on protein Z (PZ), a vitamin K-dependent plasma protein. ZPI also inhibits factor XIa in a process that does not require PZ. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms.
Probab=100.00 E-value=5.6e-65 Score=476.17 Aligned_cols=315 Identities=26% Similarity=0.442 Sum_probs=269.3
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCC--ChHHHHHHhhHHHHHHHhhhCCC
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENL--DKLDTMNVYKMEKLIQGLRANAD 78 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~--~~~~~~~~~~~~~~l~~l~~~~~ 78 (342)
+||++||+++... +++|+|+||+||+.+|+|++.||+|+|+.||.++||++... +..+++..|+ .+...+.. +
T Consensus 8 ~Fa~~l~~~~~~~-~~~Nvv~SP~si~~aL~ml~~GA~g~T~~ql~~~L~~~~~~~~~~~~~~~~~~--~l~~~~~~-~- 82 (365)
T cd02055 8 NFGFNLLRKIAMK-HDGNIIFSPFGMSLAMAGLLLAAEGETERQIAKALHLHALKDRDPGLLPALFK--GLKDNISR-N- 82 (365)
T ss_pred HHHHHHHHHHhcC-CCCcEEEChHHHHHHHHHHHhhcCchHHHHHHHHcCCCCCccccHHHHHHHHH--HHHHHhcC-C-
Confidence 5999999999864 57899999999999999999999999999999999997531 2234555565 45544432 2
Q ss_pred CceEEEEEee--eeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceE
Q psy7902 79 SGLTFTSTNK--IFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNL 151 (342)
Q Consensus 79 ~~~~l~~~n~--l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~l 151 (342)
..+.++++ +|++++++++++|.+ +|++++..+||+ +++.+++ ||+|++++|+|+|++++ .+++++|.+
T Consensus 83 --~~~~l~~~~~~~v~~~~~l~~~F~~~~~~~y~~~~~~vdF~-~~~~a~~~IN~wv~~~T~g~I~~~~--~~i~~~t~l 157 (365)
T cd02055 83 --EELGFTQGIFAFIHKDFDVKEAFFNLSKQYFDMECLCMDFQ-NASQAKFLINHNIKKETKGKIPELF--DEIDPESKL 157 (365)
T ss_pred --cceehHHHHHHHHHCCCCccHHHHHHHHHHhcCeeEEECCC-ChHHHHHHHHHHHHHhhcchHHHHh--hcCCccchh
Confidence 23455555 599999999999976 899999999995 5666666 99999999999999999 578889998
Q ss_pred EE---------ecc---------------CCceEEec--------ceeecCCCCeEEEEeecCCCceEEEEEeCCCCCCC
Q psy7902 152 VL---------WLP---------------STQESIII--------ITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQD 199 (342)
Q Consensus 152 vl---------W~~---------------~~~~~~V~--------~~~~~~~~~~~vvelP~~~~~~sm~iilP~~~~~~ 199 (342)
++ |+. +++.+.|| +|.+++++++++++|||++ +++|+||||+++ .
T Consensus 158 ~lvnai~Fkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~vv~LPy~~-~~sm~iiLP~~~--~ 234 (365)
T cd02055 158 ILLDYIFFKGKWLTPFDPEFTEIDTFHIDKYKSIKVPMMFGADKFASTFDENFRCHVIKLPYKG-KATMLIVIMEKG--E 234 (365)
T ss_pred hhhHHHHHHHHHhCCCChhhCccceEEcCCCcEEEehhhcccCceeeEEeCCCCeEEEEeeeCC-CcEEEEEEcCCC--C
Confidence 87 877 34556777 5677899999999999975 689999999987 7
Q ss_pred cHHHHHHHhcCCchHHHHHhhhcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCCCCCCCCCC--CCCeeecceee
Q psy7902 200 GVGDILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLT--DSHIAFGDAVH 277 (342)
Q Consensus 200 ~l~~l~~~L~~~~~~l~~~~~~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~~ad~s~i~--~~~l~ls~v~q 277 (342)
+|.++++.|+.+ .+.+|..+ ++.+.|+|.||||++++++||+++|++||++++|+..|||++|+ +++++|++++|
T Consensus 235 ~l~~l~~~l~~~--~l~~~~~~-~~~~~v~l~lPKF~i~~~~~l~~~L~~lGi~~~F~~~adls~i~~~~~~l~vs~v~h 311 (365)
T cd02055 235 DHLALEDHLTMD--LVESWLAN-MKSRNMDIFFPKFKLDQKYEMHELLRALGIKNIFAPFADLSELLADGKHLQVSQVLQ 311 (365)
T ss_pred CHHHHHHHhhHH--HHHHHHHh-ccceEEEEEEEEEEEEEEeehHHHHHHcCcchhhcCcCCcccccCCCCcEEEEeeeE
Confidence 899999999987 89999988 69999999999999999999999999999999999789999986 46799999999
Q ss_pred eEEEEecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEE
Q psy7902 278 KARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVF 334 (342)
Q Consensus 278 ~~~i~v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v 334 (342)
++.|+|||+|++|+|+|.......+. +..|++||||+|+|+|+.++.|||+|+|
T Consensus 312 ka~ievdE~Gt~aaa~t~~~~~~~~~---~~~f~~nrPF~f~I~~~~~~~~LF~G~v 365 (365)
T cd02055 312 KAVIEVDEKGTEAAAAIGSEIIAFSM---PPVIKVDRPFHFMIFEETFGMLLFIGRV 365 (365)
T ss_pred EEEEEEccCCchhhhhhcceecccCC---CCeEEeeCCEEEEEEECCCCcEEEEEeC
Confidence 99999999999999999754333222 3579999999999999999999999996
No 21
>PHA02948 serine protease inhibitor-like protein; Provisional
Probab=100.00 E-value=1.7e-64 Score=472.41 Aligned_cols=313 Identities=20% Similarity=0.361 Sum_probs=266.3
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCCChHHHHHHhhHHHHHHHhhhCC-CC
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGLRANA-DS 79 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~~ 79 (342)
+||++||+++...++++|++|||+||+.+|+|++.||+|+|++||.++||++. .+++..++ +++..+.... .+
T Consensus 23 ~f~~~l~~~l~~~~~~~Nv~~SP~Si~~aL~ml~~GA~G~T~~el~~~L~~~~----~~~~~~~~--~l~~~~~~~~~~~ 96 (373)
T PHA02948 23 NAGILAYKNIQDGNEDDNIVFSPFGYSFSMFMSLLPASGNTRVELLKTMDLRK----RDLGPAFT--ELISGLAKLKTSK 96 (373)
T ss_pred HHHHHHHHHHHhcCCCCCEEEchHHHHHHHHHHHhccCCcHHHHHHHHhCCCc----hhHHHHHH--HHHHHHhcccccC
Confidence 59999999998877789999999999999999999999999999999999973 24566665 5665554322 22
Q ss_pred ceE-EEEEeeeeccCCCCchhhHhh-hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceEEE---
Q psy7902 80 GLT-FTSTNKIFVNDKIPVKECMTA-IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL--- 153 (342)
Q Consensus 80 ~~~-l~~~n~l~~~~~~~l~~~f~~-~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~lvl--- 153 (342)
.. +.++|++|+++++.++++|.+ +|.++++.+||. +.+++ ||+||+++| +|.+++++.+++++|.++|
T Consensus 97 -~~~~~~an~~~v~~~~~~~~~f~~~~~~~~v~~vdF~---~~a~~~IN~WV~~~T--~I~~~~~~~~i~~~t~lvLvNa 170 (373)
T PHA02948 97 -YTYTDLTYQSFVDNTVCIKPSYYQQYHRFGLYRLNFR---RDAVNKINSIVERRS--GMSNVVDSTMLDNNTLWAIINT 170 (373)
T ss_pred -cchHHHHHHHHHhcCCCccHHHHHHHhhCceEecCcc---HHHHHHHHHHHHhcC--CCcccCCCCCCCCCceEEEEEE
Confidence 33 368899999999999999987 677899999994 24555 999999998 5999998888999999888
Q ss_pred ------ecc--------------CCceEEec------c----eeecCCCCeEEEEeecCCCceEEEEEeCCCCCCCcHHH
Q psy7902 154 ------WLP--------------STQESIII------I----TVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203 (342)
Q Consensus 154 ------W~~--------------~~~~~~V~------~----~~~~~~~~~~vvelP~~~~~~sm~iilP~~~~~~~l~~ 203 (342)
|++ .++++.|| . |.+.++.++++++|||+++++||+|+||+ ++.+
T Consensus 171 iyFkg~W~~~F~~~~T~~~~F~~~~~~~~V~mM~~~~~~~~~~~~~~~~~~~vl~LPY~~~~~sM~iiLP~-----~l~~ 245 (373)
T PHA02948 171 IYFKGTWQYPFDITKTHNASFTNKYGTKTVPMMNVVTKLQGNTITIDDEEYDMVRLPYKDANISMYLAIGD-----NMTH 245 (373)
T ss_pred EEEeeeecCCCCcccCeeceeEeCCCCEEchhheeccccccceeeccCcCceEEEEecCCCcEEEEEEcCC-----cHHH
Confidence 987 12245666 1 34567889999999999889999999994 4788
Q ss_pred HHHHhcCCchHHHHHhhhcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCC-CCCCCCCCCCCeeecceeeeEEEE
Q psy7902 204 ILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSP-GADLSRLTDSHIAFGDAVHKARLD 282 (342)
Q Consensus 204 l~~~L~~~~~~l~~~~~~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~-~ad~s~i~~~~l~ls~v~q~~~i~ 282 (342)
+++.|+.+ .+..|..+ +..+.|+|.||||++++++||+++|+ +|++++|++ .|||++|++++++|++|+|++.|+
T Consensus 246 l~~~l~~~--~l~~~~~~-~~~~~v~v~lPKFki~~~~~L~~~L~-~~i~~~F~~~~Adfs~is~~~l~vs~v~hka~Ie 321 (373)
T PHA02948 246 FTDSITAA--KLDYWSSQ-LGNKVYNLKLPRFSIENKRDIKSIAE-MMAPSMFNPDNASFKHMTRDPLYIYKMFQNAKID 321 (373)
T ss_pred HHHHhCHH--HHHHHHHh-CcceEEEEEeeCEeeeeeccHHHHHH-hhhHhhCCCCcCchhhhccCceEEEeeEEEEEEE
Confidence 99999887 89999888 68899999999999999999999995 679999987 699999996679999999999999
Q ss_pred ecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEEcCC
Q psy7902 283 LDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVFNEP 337 (342)
Q Consensus 283 v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~P 337 (342)
|||+|++|+|+|.+....++ .+.+|++||||+|+|+|+.|+.|||+|+|.+|
T Consensus 322 VdE~GteAaAaT~~~~~~~~---~~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P 373 (373)
T PHA02948 322 VDEQGTVAEASTIMVATARS---SPEELEFNTPFVFIIRHDITGFILFMGKVESP 373 (373)
T ss_pred ECCCceEEeecceeeeeccC---CCCeEEeeCCEEEEEEECCCCcEEEEEEecCC
Confidence 99999999999975433222 24579999999999999999999999999998
No 22
>cd02053 alpha2AP Alpha2-antiplasmin (alpha2AP) is the primary inhibitor of plasmin, a proteinase that digests fibrin, the main component of blood clots. Alpha2-Antiplasmin forms an inactive 1 : 1 stoichiometric complex with plasmin. It also rapidly crosslinks to fibrin during blood clotting by activated coagulation factor XIII, and as a consequence fibrin becomes more resistant to fibrinolysis. Therefore alpha2AP is important in modulating the effectiveness and persistence of fibrin with respect to its susceptibility to digestion and removal by plasmin. This subgroup corresponds to clade F2 of the serpin superfamily.
Probab=100.00 E-value=4.5e-64 Score=468.47 Aligned_cols=306 Identities=26% Similarity=0.443 Sum_probs=258.7
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCCChHHHHHHhhHHHHHHHhhhCCCCc
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGLRANADSG 80 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 80 (342)
+||++||+++..+++++|+|+||+||+.+|+|++.||+|+|++||.++||++.. ...+ +++..+.....+
T Consensus 7 ~F~~~l~~~~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~el~~~L~~~~~---~~~~------~~~~~l~~~~~~- 76 (351)
T cd02053 7 GFSTDLLSEVAQESTKPNLILSPLSIALALSHLALGAQNETEQRLLKTLHAESL---PCLH------HLLSRLRQDLGP- 76 (351)
T ss_pred hHHHHHHHHHHhhCCCCcEEECcHHHHHHHHHHHhhcChHHHHHHHHhcCCCCh---HHHH------HHHHHHhccCCc-
Confidence 599999999998778899999999999999999999999999999999999732 2222 344444443344
Q ss_pred eEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceEEE--
Q psy7902 81 LTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL-- 153 (342)
Q Consensus 81 ~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~lvl-- 153 (342)
..++++|++|++++++++++|.+ .|++++ +||..+++.+++ ||+|++++|+|+|++++ .+++++|.+++
T Consensus 77 ~~l~~an~i~v~~~~~~~~~f~~~~~~~~~~~~--~~~~~~~~~~~~~IN~wv~~~T~g~I~~~~--~~~~~~t~~vlvN 152 (351)
T cd02053 77 GALRLATRMYLQKGFEIKESFLEESEKLYGAKP--VSLTGTKEDDLANINKWVKEATEGQIPNFL--SDLPHDTVLLLLN 152 (351)
T ss_pred cEeehhhHHHHhCCCchhHHHHHHHHHHcCCEE--eecCCCCHHHHHHHHHHHHHhccCchhHhc--CCCCcchHhheee
Confidence 77999999999999999999976 788875 566434556666 99999999999999999 47888898877
Q ss_pred -------ecc---------------CCceEEec---------ceeecCCCCeEEEEeecCCCceEEEEEeCCCCCCC-cH
Q psy7902 154 -------WLP---------------STQESIII---------ITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQD-GV 201 (342)
Q Consensus 154 -------W~~---------------~~~~~~V~---------~~~~~~~~~~~vvelP~~~~~~sm~iilP~~~~~~-~l 201 (342)
|++ +++++.|| +|.+.+++++++++|||++ ++||+|+||++. . +|
T Consensus 153 aiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~~vleLPy~~-~~Sm~iiLP~~~--~~~l 229 (351)
T cd02053 153 AIHFKGFWRNKFDPSLTQRDAFHLDDDFTVSVEMMQASTYPLRWFHLEQPEIQVAKFPFKG-NMSFVVLMPTPF--TWNV 229 (351)
T ss_pred EEEEeeeecCCCChhcCeecceEECCCceEEeehhcccccceeeEecCCCCeEEEEEecCC-CeEEEEEecccc--cccH
Confidence 987 34556666 3456789999999999986 599999999885 4 59
Q ss_pred HHHHHHhcCCchHHHHHhhhcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCCCCCCCCCCCCCeeecceeeeEEE
Q psy7902 202 GDILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLTDSHIAFGDAVHKARL 281 (342)
Q Consensus 202 ~~l~~~L~~~~~~l~~~~~~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~~ad~s~i~~~~l~ls~v~q~~~i 281 (342)
.+++++|+.. .+..+. ++.+.++|+||||++++++||+++|++||++++|+. |||++|++++++|++++|++.|
T Consensus 230 ~~~~~~l~~~--~l~~~~---~~~~~v~v~lPKFki~~~~~L~~~L~~lGi~~~F~~-adfs~i~~~~~~vs~v~hka~i 303 (351)
T cd02053 230 SQVLANLNWD--DLYRRL---PKERPTKVKLPKLKLDYQLELNEALSQLGLQELFQA-PDLSGISDEPLFVSSVQHQSTL 303 (351)
T ss_pred HHHHHhCCHH--HHHHhh---ccceEEEEEccCEEEEeeechHHHHHhCCchhcccc-ccccccCCCCceeeeeeEEEEE
Confidence 9999999876 666544 245678999999999999999999999999999996 9999999667999999999999
Q ss_pred EecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEE
Q psy7902 282 DLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVF 334 (342)
Q Consensus 282 ~v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v 334 (342)
||||+|++|+|+|.+.... + ...|++||||+|+|+|+.|+.|||+|+|
T Consensus 304 eVdE~Gt~aaa~t~~~~~~-~----~~~f~~drPF~f~I~~~~t~~~LF~G~v 351 (351)
T cd02053 304 ELSEKGVEASAATSVATSR-S----LSSFSVNRPFLFFIFEDTMGLPLFMGSV 351 (351)
T ss_pred EECCCcceehhcceeeccc-c----cCeEEcCCCEEEEEEECCCCCEEEEEeC
Confidence 9999999999999764332 1 2489999999999999999999999996
No 23
>cd02050 C1_inh C1 inhibitor (C1-Inh) is a protease inhibitor of the serpin family. It plays a pivotal role in regulating the activation of the classical complement pathway and of the contact system, via regulating bradykinin formation, inhibiting factor XII and kallikrein of the contact system, and via acting on factor XI in the coagulation cascade. This subgroup corresponds to clade G of the serpin superfamily.
Probab=100.00 E-value=2e-63 Score=464.32 Aligned_cols=307 Identities=28% Similarity=0.442 Sum_probs=262.5
Q ss_pred ChHHHHHHHHhhcC-CCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCCChHHHHHHhhHHHHHHHhhhCCCC
Q psy7902 1 EFTFDLLTVLNNAN-KGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGLRANADS 79 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~-~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 79 (342)
+||++||+++.... +++|+|+||+||+.+|+||+.||+|+|++||.++||++.. ..+++..++ + +.. .
T Consensus 4 ~F~~~l~~~~~~~~~~~~N~v~SP~si~~aL~ml~~GA~g~T~~ql~~~L~~~~~--~~~~~~~~~--~----l~~---~ 72 (352)
T cd02050 4 EFSLKLYQHLSESAKPDTNLLFSPVSIALLLSHLLLGARGKTQRRLESILSYPHD--FACVHSALK--K----LKN---K 72 (352)
T ss_pred hHHHHHHHHHhhccCCCCCEEEChHHHHHHHHHHhcccCccHHHHHHHhcCCCCc--hhHHHHHHH--H----hhh---c
Confidence 59999999998766 7899999999999999999999999999999999999853 334444443 2 221 2
Q ss_pred ceEEEEEeeeeccCCCCchhhHhh----hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceEEE-
Q psy7902 80 GLTFTSTNKIFVNDKIPVKECMTA----IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL- 153 (342)
Q Consensus 80 ~~~l~~~n~l~~~~~~~l~~~f~~----~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~lvl- 153 (342)
..+.++|++|++++++++++|.+ +|++++..+||. ++.+++ ||+|++++|+|+|++++ .+++++|.+++
T Consensus 73 -~~l~~an~i~~~~~~~l~~~f~~~~~~~y~~~~~~~~~~--~~~a~~~IN~wv~~~T~g~I~~~~--~~i~~~t~l~lv 147 (352)
T cd02050 73 -LGLLSASQIFHHPDLHLRESFTNESWQFYKARPRELSNN--SELNLEMINSWVAKATNNKIPRLL--DSLPSETRLVLL 147 (352)
T ss_pred -chhHHHHHHHHhCCCCccHHHHHHHHHHhCCcceeecCC--hHHHHHHHHHHHHHHhcchHHHHh--cccCCCceEEEE
Confidence 44888999999999999999976 799999999983 355666 99999999999999999 57889999887
Q ss_pred --------ecc--------------CCceEEec---------ceeecCCCCeEEEEeecCCCceEEEEEeCCCCCCCcHH
Q psy7902 154 --------WLP--------------STQESIII---------ITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVG 202 (342)
Q Consensus 154 --------W~~--------------~~~~~~V~---------~~~~~~~~~~~vvelP~~~~~~sm~iilP~~~~~~~l~ 202 (342)
|++ +++.+.|| .|.+.+++++++++|||+ +++||+|+||++. ..+|.
T Consensus 148 naiyFkg~W~~~F~~~~T~~~~F~~~~~~~~V~mM~~~~~~~~~~~~~~l~~~v~~lp~~-~~~sm~iiLP~~~-~~~l~ 225 (352)
T cd02050 148 NAVYFQAQWKKKFDTKHTVLLPFKRNGDPVKVPVMYSKKYPVASFTDPRLKAQVGRLELS-GGLSLVVLVPRGP-KEDLE 225 (352)
T ss_pred eeEEEeeecCCCCCcccCccCceeECCceEEeeEeecCccceeeEEcCCcCeEEEEecCC-CceEEEEEeeCCC-CCCHH
Confidence 887 23456666 234568899999999996 5799999999864 25899
Q ss_pred HHHHHhcCCchHHHHHhhhcC---CCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCCCCCCCCCC-CCCeeecceeee
Q psy7902 203 DILAALKKDPTSFKRFTEDSQ---NLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLT-DSHIAFGDAVHK 278 (342)
Q Consensus 203 ~l~~~L~~~~~~l~~~~~~~l---~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~~ad~s~i~-~~~l~ls~v~q~ 278 (342)
+++++|+.+ .+..|..+ + ..+.++|.||||++++++||+++|++||++++|+. |||++|+ +.+++|++++|+
T Consensus 226 ~l~~~l~~~--~~~~~~~~-l~~~~~~~v~l~lPKF~i~~~~dl~~~L~~lGi~~~F~~-adfs~i~~~~~l~v~~v~hk 301 (352)
T cd02050 226 AVERALTPP--AFLAMLEK-MAANTPQRTEVTLPRIKLDLAVDMVALMHKLGLFGLFLD-ANLCGLYQDPELAVDAAQHR 301 (352)
T ss_pred HHHHhcCHH--HHHHHHHh-hhhcCceEEEEEcceEEEeeccchHHHHHHcCChhhccc-cchhhccCCCCeEEEeeEEe
Confidence 999999987 89999876 4 35789999999999999999999999999999985 9999999 678999999999
Q ss_pred EEEEecCCCccccccchhhhcccCCCCCCceEEecCCeEEEEEeCCCCcEEEEEEE
Q psy7902 279 ARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVF 334 (342)
Q Consensus 279 ~~i~v~E~G~~a~a~t~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v 334 (342)
+.|+|||+|++|+|+|.+...+ .+..|++||||+|+|+|+.|+.|||+|+|
T Consensus 302 ~~ieVdE~Gt~Aaa~t~~~~~~-----~~~~f~~drPF~f~I~~~~t~~~LF~G~v 352 (352)
T cd02050 302 AVLTLTEKGVEAAAATATSFAR-----TALSFEALQPFLFVLWDDQAKVPLFMGRV 352 (352)
T ss_pred eEEEECCCchhhhhhccccccc-----ccceEEcCCCEEEEEEECCCCceEEEEeC
Confidence 9999999999999999754332 13589999999999999999999999996
No 24
>PHA02660 serpin-like protein; Provisional
Probab=100.00 E-value=7e-61 Score=447.06 Aligned_cols=299 Identities=23% Similarity=0.403 Sum_probs=247.2
Q ss_pred ChHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHhhcchhHHHHHHHhhCCCCCCChHHHHHHhhHHHHHHHhhhCCCCc
Q psy7902 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGLRANADSG 80 (342)
Q Consensus 1 ~Fa~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~ql~~~L~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 80 (342)
+||++||+.+. ++|+++||+||+.+|+|++.||+|+|+.||.++||+... + +. .
T Consensus 17 ~f~~~l~~~~~----~~Nvv~SP~Si~~aL~ml~~GA~G~T~~el~~~L~~~~~-~---~~-----------------~- 70 (364)
T PHA02660 17 DLGFCILKSLH----RFNIVFSPESLKAFLHVLYLGSERETKNELSKYIGHAYS-P---IR-----------------K- 70 (364)
T ss_pred HHHHHHHHhcC----CCCEEEChHHHHHHHHHHHhhcCchHHHHHHHHhCcccc-c---cc-----------------h-
Confidence 49999999994 489999999999999999999999999999999998632 1 00 0
Q ss_pred eEEEEEeeeeccCCCCchhhHhh---hcCCceEEecCCCCHHHHHH-HHHHHHHhcccccccCccCCCCCCCceEEE---
Q psy7902 81 LTFTSTNKIFVNDKIPVKECMTA---IFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL--- 153 (342)
Q Consensus 81 ~~l~~~n~l~~~~~~~l~~~f~~---~~~~~~~~vdf~~~~~~~~~-iN~wv~~~T~g~i~~~~~~~~i~~~t~lvl--- 153 (342)
..+..+|++|++++++++++|.+ .|+++++.+||.++++.+++ ||+||+++|+ |.+++ +++++|.++|
T Consensus 71 ~~l~~an~l~v~~~~~l~~~F~~~~~~~~~~v~~vdF~~~~~~a~~~IN~WV~~~T~--I~~~~---~~~~~t~l~LvNa 145 (364)
T PHA02660 71 NHIHNITKVYVDSHLPIHSAFVASMNDMGIDVILADLANHAEPIRRSINEWVYEKTN--IINFL---HYMPDTSILIINA 145 (364)
T ss_pred hhHHHHHHHHHhcCCchhHHHHHHHHHcCCceEEeccccCHHHHHHHHHHHHHhccC--Ccccc---ccCCCchhhhhhh
Confidence 11345789999999999999976 58999999999766777777 9999999999 99987 4678899887
Q ss_pred ------ecc---------------CCceEEec------ceeecCCCCeEEEEeecCCC-ceEEEEEeCCCCCCCcHHHHH
Q psy7902 154 ------WLP---------------STQESIII------ITVLSSELNAHILEVPYKGG-NMSMFFLLPPFASQDGVGDIL 205 (342)
Q Consensus 154 ------W~~---------------~~~~~~V~------~~~~~~~~~~~vvelP~~~~-~~sm~iilP~~~~~~~l~~l~ 205 (342)
|++ +++.+.|| .|.|....++++++|||+++ .++|+|+||++.+..+|.+++
T Consensus 146 iyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~vleLPY~~~~~~sM~iiLP~~~~~~~L~~l~ 225 (364)
T PHA02660 146 VQFNGLWKYPFLRKKTTMDIFNIDKVSFKYVNMMTTKGIFNAGRYHQSNIIEIPYDNCSRSHMWIVFPDAISNDQLNQLE 225 (364)
T ss_pred hhcccHhhcCCCcccCcccccccCCCceEeceeccccCeeeeeecCCCeEEECccCCCCceEEEEEeeCCcccchHHHHH
Confidence 987 34456676 34443445789999999864 579999999874124799999
Q ss_pred HHhcCCchHHHHHhhhcCCCeeEEEEeeeeEEeeccchHHHHhhCCCccCCCCCCCCCCCC-CC----Cee--ecceeee
Q psy7902 206 AALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLT-DS----HIA--FGDAVHK 278 (342)
Q Consensus 206 ~~L~~~~~~l~~~~~~~l~~~~v~l~lPkF~i~~~~dl~~~L~~lG~~~~F~~~ad~s~i~-~~----~l~--ls~v~q~ 278 (342)
+.|+.+ .+..|... +..+.|+|.||||+++.++||+++|++||++++|+. |||++|+ .. +++ +++|+|+
T Consensus 226 ~~l~~~--~l~~~~~~-~~~~~v~l~LPKFki~~~~~L~~~L~~lGi~~~F~~-Adfs~i~~~~~~~~~l~~~vs~v~hk 301 (364)
T PHA02660 226 NMMHGD--TLKAFKHA-SRKKYLEISIPKFRIEHSFNAEHLLPSAGIKTLFTN-PNLSRMITQGDKEDDLYPLPPSLYQK 301 (364)
T ss_pred HhhhHH--HHHHHHhh-CceeEEEEEccceEeeeeechHHHHHHcCchhhccc-cCccccccCCCcccccccccccceEe
Confidence 999988 89888877 688999999999999999999999999999999985 9999998 32 477 7999999
Q ss_pred EEEEecCCCccccccchhhhcccCCC-------CCCceEEecCCeEEEEEeCCCCcEEEEEEEcCC
Q psy7902 279 ARLDLDEQGTTAAAATAVFAFRSSRP-------LEPVRYEANHPFLYFLVDKEIQSILFAGVFNEP 337 (342)
Q Consensus 279 ~~i~v~E~G~~a~a~t~~~~~~~~~~-------~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~P 337 (342)
+.|+|||+|++|+|+|..... ...+ ..+.+|++||||+|+|++ ++.|||+|+|.+|
T Consensus 302 a~ieVdE~GteAaaat~~~~~-~~~~~~~~~~~~~~~~f~~drPFlf~I~~--~~~iLF~G~v~~P 364 (364)
T PHA02660 302 IILEIDEEGTNTKNIAKKMRR-NPQDEDTQQHLFRIESIYVNRPFIFIIEY--ENEILFIGRISIP 364 (364)
T ss_pred eEEEECCCCcHHHHhhhhhhh-cccccccccccCCCceEEcCCCEEEEEec--CCeEEEEEEecCC
Confidence 999999999999988743111 1100 013579999999999997 4899999999998
No 25
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=58.78 E-value=50 Score=25.54 Aligned_cols=67 Identities=12% Similarity=0.102 Sum_probs=46.5
Q ss_pred HHHHHHHhhcCCCCcEEEChHHHHHHHHHHH----hh--cchhHHHHHHHhhCCCCCCChHHHHHHhhHHHHHHHh
Q psy7902 4 FDLLTVLNNANKGKNVFVSPFSIYQALLTAY----FI--SNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGL 73 (342)
Q Consensus 4 ~~l~~~l~~~~~~~N~v~SP~si~~~L~~l~----~g--a~g~t~~ql~~~L~~~~~~~~~~~~~~~~~~~~l~~l 73 (342)
.+.++.... .+..|..+.|-++...+..++ .+ -..-+..+..++||++...+..++...|+ ++....
T Consensus 21 ~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~f~~~Ms~~eAy~ILGv~~~As~~eIkkaYR--rLa~~~ 93 (116)
T PTZ00100 21 YRYLKNQKI-FGSNNMSFPLSGFNPSLGSLFLKNDLKGFENPMSKSEAYKILNISPTASKERIREAHK--QLMLRN 93 (116)
T ss_pred HHHHHHHhh-ccCccccCCchhhhHHHHHHHhccccccccCCCCHHHHHHHcCCCCCCCHHHHHHHHH--HHHHHh
Confidence 344444333 456788888877777777766 32 33446789999999998777888988887 554443
No 26
>PF01666 DX: DX module; InterPro: IPR002593 This domain has no known function. It is found in several Caenorhabditis elegans proteins. The domain contains 6 conserved cysteines that probably form three disulphide bridges.
Probab=31.93 E-value=57 Score=23.12 Aligned_cols=25 Identities=24% Similarity=0.255 Sum_probs=21.5
Q ss_pred ecCCeEEEEEeCCCCcEEEEEEEcC
Q psy7902 312 ANHPFLYFLVDKEIQSILFAGVFNE 336 (342)
Q Consensus 312 ~drPFlf~I~~~~t~~ilf~G~v~~ 336 (342)
+.+.|.|+--|..|+.|.+||.+..
T Consensus 14 ip~~~~~~fCdp~t~ki~imG~~~~ 38 (76)
T PF01666_consen 14 IPPNFSFAFCDPETGKIVIMGEENF 38 (76)
T ss_pred CCCCcceEEECCcCCeEEEEeeecc
Confidence 4667888889999999999999874
No 27
>KOG0572|consensus
Probab=28.15 E-value=75 Score=29.96 Aligned_cols=30 Identities=27% Similarity=0.247 Sum_probs=25.9
Q ss_pred ceEEecCCeEEEEEeCCCCcEEEEEEEcCCCC
Q psy7902 308 VRYEANHPFLYFLVDKEIQSILFAGVFNEPPN 339 (342)
Q Consensus 308 ~~f~~drPFlf~I~~~~t~~ilf~G~v~~P~~ 339 (342)
+-+.+|+ +|.++|..-+.||.+|+..+|.-
T Consensus 171 v~m~~d~--l~avRDp~G~RPL~iG~r~~~~g 200 (474)
T KOG0572|consen 171 VFMTADK--LYAVRDPYGNRPLCIGRRSNPDG 200 (474)
T ss_pred EEEEccE--EEEEecCCCCccceEeeecCCCC
Confidence 5566676 99999999999999999999954
No 28
>PF07037 DUF1323: Putative transcription regulator (DUF1323); InterPro: IPR010749 This family consists of several hypothetical Enterobacterial proteins of around 120 residues in length. The function of this family is unknown.
Probab=22.17 E-value=50 Score=25.54 Aligned_cols=11 Identities=55% Similarity=1.069 Sum_probs=9.2
Q ss_pred HHH-HHHHHHHh
Q psy7902 121 ARA-INSWVAQE 131 (342)
Q Consensus 121 ~~~-iN~wv~~~ 131 (342)
+++ ||+||.+.
T Consensus 13 srQTINrWvRke 24 (122)
T PF07037_consen 13 SRQTINRWVRKE 24 (122)
T ss_pred cHHHHHHHHHhc
Confidence 567 99999985
Done!