RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy7902
(342 letters)
>2h4r_A MENT, heterochromatin-associated protein MENT; serine protease
inhibitor, serpin, hydrolase inhibitor; 2.70A {Gallus
gallus} PDB: 2dut_A
Length = 415
Score = 266 bits (681), Expect = 1e-86
Identities = 100/402 (24%), Positives = 172/402 (42%), Gaps = 68/402 (16%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
FT DL LN N+ KN+F SP+SI AL Y + +T + +VL E + +
Sbjct: 15 NFTVDLFNKLNETNRDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHFTEAVRAESS 74
Query: 61 MNVYKMEKLIQGLRA----------------------NADSGLTFTSTNKIFVNDKIPVK 98
+ R + + S N+I+V +
Sbjct: 75 SVARPSRGRPKRRRMDPEHEQAENIHSGFKELLTAFNKPRNNYSLRSANRIYVEKTYALL 134
Query: 99 E----CMTAIFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL 153
+ +E Q ++F E +R IN+WV ++T++ IK+L+++ V + T L+L
Sbjct: 135 PTYLQLSKKYYKAEPQKVNFKTAPEQSRKEINTWVEKQTESKIKNLLSSDDVKATTRLIL 194
Query: 154 ---------WLP-----STQESI------IIITV------------LSSELNAHILEVPY 181
W T V + ++N ++E+PY
Sbjct: 195 VNAIYFKAEWEVKFQAEKTSIQPFRLSKNKSKPVKMMYMRDTFPVLIMEKMNFKMIELPY 254
Query: 182 KGGNMSMFFLLP--PFASQDGVGDILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSL 237
+SMF LLP G+ + L + DS+ + V++ +PKFSL
Sbjct: 255 VKRELSMFILLPDDIKDGTTGLEQLEREL--TYERLSEWA-DSKMMTETLVDLHLPKFSL 311
Query: 238 TQEMNLIPTLSDLGVKDLFSPGADLSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAV 296
++L TL ++G+ F+ AD +TD +A +H++ + +DE+GT AAAATAV
Sbjct: 312 EDRIDLRDTLRNMGMTTAFTTNADFRGMTDKKDLAISKVIHQSFVAVDEKGTEAAAATAV 371
Query: 297 -FAFRSSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVFNEP 337
+F +S ++++ +HPF +F+ + ++ILF G F P
Sbjct: 372 IISFTTSVINHVLKFKVDHPFHFFIRHNKSKTILFFGRFCCP 413
>3nda_A Serpin-2; vaccination target, TICK, hydrolase inhibitor; HET: 1PE;
1.80A {Ixodes ricinus}
Length = 377
Score = 262 bits (672), Expect = 9e-86
Identities = 98/376 (26%), Positives = 163/376 (43%), Gaps = 52/376 (13%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPE-NLDKLD 59
F LL L + KNVF SP+S+ A+ A+ + T+ L Q L + +L
Sbjct: 13 RFGLRLLRALP-SGPEKNVFFSPYSVSTAMGMAFAGARGQTQQELSQGLGFSDVDLTDAG 71
Query: 60 TMNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFG 115
++ Y + L+ + S T N + + + + + F +E+ +DF
Sbjct: 72 VLDAYT--HHTERLK-STPSNSTLDVANAAAIQRTLALLNSYESALQSSFGAELHKVDFA 128
Query: 116 NEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL-----PSTQE 160
E +AA +N+WV ++T + I+ L ++ T LVL W T++
Sbjct: 129 GEPQAAVDFVNNWVKRKTHDKIEKLFN-EPLDPDTLLVLLNAIYFKGEWNTAFVKEHTEK 187
Query: 161 SI------IIITV------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVG 202
+ V +L ++E+PY+G + +M LLP GV
Sbjct: 188 RQFFNGGVTPVEVDTMRLEARIKYRFFDDLQVEVVELPYRGLDYTMAILLP--KENTGVE 245
Query: 203 DILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGA 260
+ L + RF +L+ + + +PKF L + +L L LG+K +F GA
Sbjct: 246 GLKQNL-----TIDRFQNYLSDLRERKITVLLPKFKLETKYSLKAPLQSLGIKQIFESGA 300
Query: 261 DLSRLTDSHIAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFL 320
DLS + D + HKA ++++E+GT AAA T V S EPV + +HPFL+F+
Sbjct: 301 DLSGINDGSLRVSAVEHKAVVEVNEEGTVAAATTGVVIVPYSLGPEPVVFRVDHPFLFFI 360
Query: 321 VDKEIQSILFAGVFNE 336
+ I F G N+
Sbjct: 361 RNTRTDDIFFVGQVNK 376
>3kcg_I Antithrombin-III, ATIII; michaelis complex, blood coagulation,
calcium, disulfide bond, EGF-like domain, glycoprotein,
hemophilia, hydrolase; HET: NAG FUC MAN NTP; 1.70A {Homo
sapiens} PDB: 1e04_I* 1ath_A 1ant_L* 1br8_L 1azx_I*
1dzh_L* 1e03_L* 1dzg_L* 1e05_L* 1jvq_L* 1lk6_L* 1nq9_I*
1oyh_L* 1r1l_L* 1sr5_A* 2ant_L* 2beh_L* 2hij_L* 2znh_A*
3evj_I* ...
Length = 432
Score = 262 bits (672), Expect = 5e-85
Identities = 91/380 (23%), Positives = 161/380 (42%), Gaps = 50/380 (13%)
Query: 1 EFTFDLL-TVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLD 59
F + ++ N N+F+SP SI A + +T L +V + +K
Sbjct: 57 RFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTS 116
Query: 60 TMNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFG 115
+ KL L A+ S N++F + + E ++ +++Q +DF
Sbjct: 117 DQIHFFFAKLNCRLYRKANKASKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFK 176
Query: 116 NEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL-----PSTQE 160
E +RA IN WV+ +T+ I D+I + +N T LVL W +T++
Sbjct: 177 ENAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRK 236
Query: 161 SIIIIT-----------------VLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203
+ +LE+P+KG +++M +LP + +
Sbjct: 237 ELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFKGDDITMVLILP--KPEKSLAK 294
Query: 204 ILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPG-A 260
+ L + + E L+ + + +P+F + +L L D+G+ DLFSP +
Sbjct: 295 VEKEL-----TPEVLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKS 349
Query: 261 DLSRLTDSH---IAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFL 317
L + + DA HKA L+++E+G+ AAA+TAV S V ++AN PFL
Sbjct: 350 KLPGIVAEGRDDLYVSDAFHKAFLEVNEEGSEAAASTAVVIAGRSLNPNRVTFKANRPFL 409
Query: 318 YFLVDKEIQSILFAGVFNEP 337
F+ + + +I+F G P
Sbjct: 410 VFIREVPLNTIIFMGRVANP 429
>2zv6_A Serpin B3; serine proteinase inhibitor, reactive site loop,
acetylation, alternative splicing, cytoplasm,
polymorphism, protease inhibitor; 2.70A {Homo sapiens}
Length = 401
Score = 260 bits (667), Expect = 9e-85
Identities = 109/388 (28%), Positives = 169/388 (43%), Gaps = 58/388 (14%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
+F FDL +K N+F SP SI AL + NT +K+VL + +
Sbjct: 21 KFMFDLFQQFRK-SKENNIFYSPISITSALGMVLLGAKDNTAQQIKKVLHFDQVTENTTG 79
Query: 61 MNVYKM-----------EKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIF 105
+KL+ + NK+F + + +
Sbjct: 80 KAATYHVDRSGNVHHQFQKLLTEFN-KSTDAYELKIANKLFGEKTYLFLQEYLDAIKKFY 138
Query: 106 PSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL 155
+ ++S+DF N E +R INSWV +T IK+LI G + S T LVL W
Sbjct: 139 QTSVESVDFANAPEESRKKINSWVESQTNEKIKNLIPEGNIGSNTTLVLVNAIYFKGQWE 198
Query: 156 -----PSTQESI------IIITV------------LSSELNAHILEVPYKGGNMSMFFLL 192
T+E ++ ++ A +LE+PYKG ++SM LL
Sbjct: 199 KKFNKEDTKEEKFWPNKNTYKSIQMMRQYTSFHFASLEDVQAKVLEIPYKGKDLSMIVLL 258
Query: 193 PPFASQDGVGDILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDL 250
P DG+ + L +T QN++ V++ +P+F + + +L TL +
Sbjct: 259 P--NEIDGLQKLEEKL--TAEKLMEWT-SLQNMRETRVDLHLPRFKVEESYDLKDTLRTM 313
Query: 251 GVKDLFSPGADLSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVR 309
G+ D+F+ ADLS +T S + +HKA +++ E+G AAAATAV F SS
Sbjct: 314 GMVDIFNGDADLSGMTGSRGLVLSGVLHKAFVEVTEEGAEAAAATAVVGFGSSPTSTNEE 373
Query: 310 YEANHPFLYFLVDKEIQSILFAGVFNEP 337
+ NHPFL+F+ + SILF G F+ P
Sbjct: 374 FHCNHPFLFFIRQNKTNSILFYGRFSSP 401
>1uhg_A Ovalbumin, S-ovalbumin; allergen, egg white protein, serpin; HET:
SEP NAG; 1.90A {Gallus gallus} SCOP: e.1.1.1 PDB:
1ova_A* 1jti_A
Length = 385
Score = 257 bits (660), Expect = 6e-84
Identities = 79/386 (20%), Positives = 160/386 (41%), Gaps = 58/386 (15%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
EF FD+ L + +N+F P +I AL Y + +T + +V+R + D+
Sbjct: 9 EFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDSTRTQINKVVRFDKLPGFGDS 68
Query: 61 MNVYKME---------KLIQGLRANADSGLTFTSTNKIFVNDKIPV----KECMTAIFPS 107
+ ++ + + +F+ ++++ ++ P+ +C+ ++
Sbjct: 69 IEAQCGTSVNVHSSLRDILNQIT-KPNDVYSFSLASRLYAEERYPILPEYLQCVKELYRG 127
Query: 108 EIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL-- 155
++ ++F + AR INSWV +T I++++ V+S+T +VL W
Sbjct: 128 GLEPINFQTAADQARELINSWVESQTNGIIRNVLQPSSVDSQTAMVLVNAIVFKGLWEKA 187
Query: 156 ---PSTQESI------IIITV------------LSSELNAHILEVPYKGGNMSMFFLLPP 194
TQ V + ILE+P+ G MSM LLP
Sbjct: 188 FKDEDTQAMPFRVTEQESKPVQMMYQIGLFRVASMASEKMKILELPFASGTMSMLVLLP- 246
Query: 195 FASQDGVGDILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGV 252
G+ + + + + +T S ++ +++ +P+ + ++ NL L +G+
Sbjct: 247 -DEVSGLEQLESII--NFEKLTEWTS-SNVMEERKIKVYLPRMKMEEKYNLTSVLMAMGI 302
Query: 253 KDLFSPGADLSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYE 311
D+FS A+LS ++ + + AVH A +++E G + +S +
Sbjct: 303 TDVFSSSANLSGISSAESLKISQAVHAAHAEINEAGREVVGSAEAGVDAASV---SEEFR 359
Query: 312 ANHPFLYFLVDKEIQSILFAGVFNEP 337
A+HPFL+ + ++LF G P
Sbjct: 360 ADHPFLFCIKHIATNAVLFFGRCVSP 385
>3sto_A Serine protease inhibitor; serpin fold, hydrolase inhibitor; 2.41A
{Schistosoma haematobium}
Length = 406
Score = 255 bits (654), Expect = 1e-82
Identities = 82/389 (21%), Positives = 138/389 (35%), Gaps = 59/389 (15%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQAL--LTAYFISNKNTEANLKQVLRLPENLDKL 58
FT L+ + G N P I L L + T + + +RL
Sbjct: 21 AFTHAYLSTVTADFGGDNFLTCPLGILFTLGILLGSGGAQGRTGYQIGKTMRLKSTSSSW 80
Query: 59 DTMNVYK-MEKLIQGLRA---------NADSGLTFTSTNKIFVNDKIPVKE----CMTAI 104
++ + M+ L Q L N + IFV V+ +
Sbjct: 81 NSSEAQQEMKSLYQELNNSLTSEKTFLNEKEENVVRISTGIFVEKTYEVERRFNESIAND 140
Query: 105 FPSEIQSMDFGNEVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL 155
E++ +DF N A IN WV Q++ ++ + T ++L W
Sbjct: 141 SEGELKQVDFSNRTSATVDINDWVDQQSNGLLEKFFT-DDIPDDTAMILVNVFYFRDFWQ 199
Query: 156 P-----STQESI------IIITV------------LSSELNAHILEVPYKGGNMSMFFLL 192
T++ ITV + I+ P + +L
Sbjct: 200 SPFEPHYTRKEDFYISPDRQITVDMMTQEGVMKYGKFEDEGFEIVSKPLNNTRFTFVIVL 259
Query: 193 PPFASQDGVGDILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDL 250
P + + L K +E +NLK V + +PKF+L ++L+PTL +
Sbjct: 260 P--LEKWSLNGATELL----NGNKVLSEYVKNLKETTVSLRLPKFTLKNTLDLVPTLKSI 313
Query: 251 GVKDLFSPG-ADLSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPV 308
GV DLF P +DLS +T + + + + L L+E G A T+ S + V
Sbjct: 314 GVVDLFDPVKSDLSGITPNPNLYVNEFIQTNVLKLNESGIEATTVTSPIFVPFSAIIPEV 373
Query: 309 RYEANHPFLYFLVDKEIQSILFAGVFNEP 337
+ HPF+ F+ D+++ + A P
Sbjct: 374 DFHVTHPFICFIYDQQLTMPIMAAKVMNP 402
>1sek_A Serpin K; serine protease inhibitor, protease; 2.10A {Manduca
sexta} SCOP: e.1.1.1 PDB: 1k9o_I
Length = 378
Score = 253 bits (649), Expect = 3e-82
Identities = 105/378 (27%), Positives = 167/378 (44%), Gaps = 57/378 (15%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
+FT + + + AN G+NV +S FS+ L S + L + L LP + T
Sbjct: 17 QFTAQMFSEVVKANPGQNVVLSAFSVLPPLGQLALASVGESHDELLRALALPNDNV---T 73
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFGN 116
+V+ L +G+ A G+ +KI+V + + + +F SE+Q++DF
Sbjct: 74 KDVFA--DLNRGV--RAVKGVDLKMASKIYVAKGLELNDDFAAVSRDVFGSEVQNVDFVK 129
Query: 117 EVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL-----PSTQESI 162
VEAA AIN WV +T N IK+L+ ++ T VL W T +
Sbjct: 130 SVEAAGAINKWVEDQTNNRIKNLVDPDALDETTRSVLVNAIYFKGSWKDKFNKERTMDRD 189
Query: 163 ------IIITV------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGDI 204
I V EL+A ++E+ Y+G SM +LP DG+ +
Sbjct: 190 FHVSKDKTIKVPTMIGKKDVRYADVPELDAKMIEMSYEGDQASMIIILP--NQVDGITAL 247
Query: 205 LAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPG-AD 261
L K + + L VEI +PKF + +L LS++ +K LF+PG A
Sbjct: 248 EQKL----KDPKALSRAEERLYNTEVEIYLPKFKIETTTDLKEVLSNMNIKKLFTPGAAR 303
Query: 262 LSRLTDSH--IAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYF 319
L L + + A+ KA ++++E+G AAAA A S P + E N PF +
Sbjct: 304 LENLLKTKESLYVDAAIQKAFIEVNEEGAEAAAANAFKITTYSFHFVP-KVEINKPFFFS 362
Query: 320 LVDKEIQSILFAGVFNEP 337
L ++ +F+GV +P
Sbjct: 363 LKYN--RNSMFSGVCVQP 378
>1wz9_A Maspin precursor; serpin, tumor suppressor, serpinb5, signaling
protein; HET: CME; 2.10A {Homo sapiens} PDB: 1xu8_A
1xqg_A 1xqj_A
Length = 375
Score = 253 bits (648), Expect = 4e-82
Identities = 76/380 (20%), Positives = 159/380 (41%), Gaps = 57/380 (15%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
F DL L NV SP + +L A + +T + QVL + D
Sbjct: 10 AFAVDLFKQLCEKEPLGNVLFSPICLSTSLSLAQVGAKGDTANEIGQVLHFE---NVKDV 66
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPV----KECMTAIFPSEIQSMDFGN 116
++ + + S + +++V+ + + + E++++DF +
Sbjct: 67 PFGFQ--TVTSDVN-KLSSFYSLKLIKRLYVDKSLNLSTEFISSTKRPYAKELETVDFKD 123
Query: 117 EVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL-----PSTQES 161
++E + IN+ + T + ++++A VN +T +++ W+ T+E
Sbjct: 124 KLEETKGQINNSIKDLTDGHFENILADNSVNDQTKILVVNAAYFVGKWMKKFPESETKEC 183
Query: 162 I------IIITV------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203
V +N I+E+P++ ++SMF LLP + G
Sbjct: 184 PFRLNKTDTKPVQMMNMEATFCMGNIDSINCKIIELPFQNKHLSMFILLPKDVEDESTG- 242
Query: 204 ILAALKK--DPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPG 259
L ++K + S ++T + + V+++IPKF + + ++ L +LG+K +FS
Sbjct: 243 -LEKIEKQLNSESLSQWT-NPSTMANAKVKLSIPKFKVEKMIDPKACLENLGLKHIFSED 300
Query: 260 -ADLSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFL 317
+D S ++++ +A + +HK L++ E G + + A+HPF+
Sbjct: 301 TSDFSGMSETKGVALSNVIHKVCLEITEDGGDSIEVPGARILQH-----KDELNADHPFI 355
Query: 318 YFLVDKEIQSILFAGVFNEP 337
Y + + ++I+F G F P
Sbjct: 356 YIIRHNKTRNIIFFGKFCSP 375
>1yxa_A Serine (OR cysteine) proteinase inhibitor, clade 3N; serpin,
antichymotrypsin, protease inhibitor, reactive centr
plasma, hydrolase inhibitor; 2.10A {Mus musculus}
Length = 398
Score = 253 bits (648), Expect = 6e-82
Identities = 97/376 (25%), Positives = 164/376 (43%), Gaps = 50/376 (13%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
+F F L L N N+ SP SI AL + NT + + L+ NL +
Sbjct: 33 DFAFSLYKELVLKNPDTNIVFSPLSISAALALVSLGAKGNTLEEILEGLKF--NLTETSE 90
Query: 61 MNVYK-MEKLIQGLRANADSGLTFTSTNKIFVNDKIPVK----ECMTAIFPSEIQSMDFG 115
++++ L+Q L + ++ + +F+ + + E ++ +E + DF
Sbjct: 91 ADIHQGFGHLLQRLN-QPKDQVQISTGSALFIEKRQQILTEFQEKAKTLYQAEAFTADFQ 149
Query: 116 NEVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL----PS----- 157
+A + IN +V ++T+ IK+L+ ++ RT +VL W P
Sbjct: 150 QPRQAKKLINDYVRKQTQGMIKELV--SDLDKRTLMVLVNYIYFKAKWKVPFDPLDTFKS 207
Query: 158 ---------------TQESIIIITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVG 202
+ E + EL+ ++E+ Y G N S F+LP Q +
Sbjct: 208 EFYCGKRRPVIVPMMSMEDLTTPYFRDEELSCTVVELKYTG-NASALFILPD---QGRMQ 263
Query: 203 DILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADL 262
+ A+L P + +++ + E+ +PKFS++ + +L LS LG++++FS ADL
Sbjct: 264 QVEASL--QPETLRKWKNSLKPRMIDELHLPKFSISTDYSLEDVLSKLGIREVFSTQADL 321
Query: 263 SRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLV 321
S +T + + VHKA LD+ E GT AAAAT V S L P+ N PFL +
Sbjct: 322 SAITGTKDLRVSQVVHKAVLDVAETGTEAAAATGVKFVPMSAKLYPLTVYFNRPFLIMIF 381
Query: 322 DKEIQSILFAGVFNEP 337
D E + F P
Sbjct: 382 DTETEIAPFIAKIANP 397
>3f5n_A Neuroserpin; cleaved form, fenib, human, tissue PLAS activator,
hydrolase inhibitor; 3.15A {Homo sapiens}
Length = 407
Score = 252 bits (647), Expect = 1e-81
Identities = 82/382 (21%), Positives = 157/382 (41%), Gaps = 57/382 (14%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
+ + ++ L + +N+ SP SI A+ + +T+ ++ + L +
Sbjct: 25 DLSVNMYNRLRATGEDENILFSPLSIALAMGMMELGAQGSTQKEIRHSMGYDS-LKNGEE 83
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKEC----MTAIFPSEIQSMDFGN 116
+ K + + +S N +FV + V E M F + + +DF
Sbjct: 84 FSFLK--EFSNMVT-AKESQYVMKIANSLFVQNGFHVNEEFLQMMKKYFNAAVNHVDFSQ 140
Query: 117 EVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WLP-----STQESI 162
V A IN WV T N +KDL++ ++ T L L W +T+
Sbjct: 141 NVAVANYINKWVENNTNNLVKDLVSPRDFDAATYLALINAVYFKGNWKSQFRPENTRTFS 200
Query: 163 ------------------------IIITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQ 198
+ +LE+PY+G +SM +L +
Sbjct: 201 FTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLVLSR--QE 258
Query: 199 DGVGDILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLF 256
+ + + + E + ++K VE+ +P+F++ QE++L L LG+ ++F
Sbjct: 259 VPLATLEPLV-----KAQLVEEWANSVKKQKVEVYLPRFTVEQEIDLKDVLKALGITEIF 313
Query: 257 SPGADLSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHP 315
A+L+ L+D+ I A+HK+ L+++E+G+ AAA + + A L P + +HP
Sbjct: 314 IKDANLTGLSDNKEIFLSKAIHKSFLEVNEEGSEAAAVSGMIAISRMAVLYP-QVIVDHP 372
Query: 316 FLYFLVDKEIQSILFAGVFNEP 337
F + + ++ +ILF G P
Sbjct: 373 FFFLIRNRRTGTILFMGRVMHP 394
>2arr_A Plasminogen activator inhibitor-2; serpin, peptide binding,
hydrolase inhibitor-PEPT complex; 1.55A {Homo sapiens}
PDB: 2arq_A 1jrr_A 1by7_A
Length = 382
Score = 251 bits (642), Expect = 3e-81
Identities = 100/381 (26%), Positives = 164/381 (43%), Gaps = 52/381 (13%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
F +L L A+ +N+F+SP+SI + Y S +TE + VL+ E D
Sbjct: 10 LFALNLFKHLAKASPTQNLFLSPWSISSTMAMVYMGSRGSTEDQMASVLQFNEVGAAADK 69
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFGN 116
++ L + + S NK+F +E + SE Q++DF
Sbjct: 70 IH-SSFRSLSSAIN-ASTGNYLLESVNKLFGEKSASFREEYIRLCQKYYSSEPQAVDFLE 127
Query: 117 EVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL----PS----- 157
E AR INSWV +TK I +L+ G V+ T +VL W
Sbjct: 128 CAEEARKKINSWVKTQTKGKIPNLLPEGSVDGDTRMVLVNAVYFKGKWKTPFEKKLNGLF 187
Query: 158 ---------------TQESIIIITVLSSELNAHILEVPYKGGNMSMFFLLP--PFASQDG 200
+ I + +L A ILE+PY G ++SMF LLP G
Sbjct: 188 PFRVNSAQRTPVQMMYLREKLNIGYIE-DLKAQILELPYAG-DVSMFLLLPDEIADVSTG 245
Query: 201 VGDILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSP 258
+ + + + ++T + VE+ IP+F L + L L +G++D F+
Sbjct: 246 LELLESEI--TYDKLNKWT-SKDKMAEDEVEVYIPQFKLEEHYELRSILRSMGMEDAFNK 302
Query: 259 G-ADLSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPF 316
G A+ S +++ + + + H+A +D++E+GT AAA T + ++ A+HPF
Sbjct: 303 GRANFSGMSERNDLFLSEVFHQAMVDVNEEGTEAAAGTGGVMTGRTGH-GGPQFVADHPF 361
Query: 317 LYFLVDKEIQSILFAGVFNEP 337
L+ ++ K ILF G F+ P
Sbjct: 362 LFLIMHKITNCILFFGRFSSP 382
>3pzf_A Serpin 2; protease inhibitor, melanization, hydrolase inhibito;
1.75A {Anopheles gambiae}
Length = 397
Score = 249 bits (637), Expect = 3e-80
Identities = 80/387 (20%), Positives = 151/387 (39%), Gaps = 65/387 (16%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNK-------NTEANLKQVLRLPE 53
EF + + N NV +SPFS+ L Y S+ NT+ L V++
Sbjct: 24 EFDLMFVKEIF-KNHNSNVVLSPFSVKILLTLIYEASDTSFGNAVSNTKRELSSVIQND- 81
Query: 54 NLDKLDTMNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVK----ECMTAIFPSEI 109
+ T + YK +L++ + + FV+D I V + + + +
Sbjct: 82 --NIDHTRSYYK--QLLESAQ-QDNKDYDLNIATNFFVDDFIEVINKYQQIANTHYHAML 136
Query: 110 QSMDFGNEVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL----- 155
+ + + N + A IN+WV++ T +++++ + + L W
Sbjct: 137 EKVSYSNPTQTAATINNWVSEHTNGRLREIVTPDSLEG-AVITLVNVIYFKGLWTYPFPE 195
Query: 156 PSTQESI------IIITV------------LSSELNAHILEVPYKGGNMSMFFLLPPFAS 197
+ S++L A IL +PY+G ++M+F+LP
Sbjct: 196 VANNVKPFYGTRGKPTNAQYMEQNGQFYYDNSADLGAQILRLPYRGNKLAMYFILP--NP 253
Query: 198 QDGVGDILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDL 255
+ V +L + + + ++ V + +PKF L L +G++++
Sbjct: 254 DNTVNQVLDRI-----NSASLHQALWYMEENEVNVTLPKFKFDFSEQLNEPLQQVGIREI 308
Query: 256 FSPGADLSRLTDSHIAFGD-----AVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRY 310
FS A L L A + KA + ++E G+ A AAT + +
Sbjct: 309 FSQNASLPLLARGRGARDEVRVSRIFQKAGITINELGSEAYAATEIQLVNKFGGDGVQIF 368
Query: 311 EANHPFLYFLVDKEIQSILFAGVFNEP 337
AN PF++F+ D+ + ++LFAG P
Sbjct: 369 NANRPFIFFIEDETLGTMLFAGKIENP 395
>2vdx_A Corticosteroid-binding globulin; transport protein, cortisol
binding globulin, glycoprotein, lipid-binding, disease
mutation, CBG, SERP cleaved; 1.84A {Homo sapiens} PDB:
2vdy_A*
Length = 373
Score = 247 bits (633), Expect = 6e-80
Identities = 104/377 (27%), Positives = 168/377 (44%), Gaps = 57/377 (15%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
+F F L L + KN+F+SP SI AL + +T A L Q L NL +
Sbjct: 13 DFAFSLYKHLVALSPKKNIFISPVSISMALAMLSLGTCGHTRAQLLQGLGF--NLTERSE 70
Query: 61 MNVYKM-EKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFG 115
+++ + L Q +D+ L T N +F++ + + E + + SE+ +M+F
Sbjct: 71 TEIHQGFQHLHQLFA-KSDTSLEMTMGNALFLDGSLELLESFSADIKHYYESEVLAMNFQ 129
Query: 116 NEVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL-----PSTQES 161
+ A+R INS+V +T+ I DL ++S LVL W ST+E
Sbjct: 130 DWATASRQINSYVKNKTQGKIVDLF--SGLDSPAILVLVNYIFFKGTWTQPFDLASTREE 187
Query: 162 I------IIITV------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203
++ V SEL ++++ Y G N ++FF+LP + +
Sbjct: 188 NFYVDETTVVKVPMMLQSSTISYLHDSELPCQLVQMNYVG-NGTVFFILP---DKGKMNT 243
Query: 204 ILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGAD 261
++AAL S S L V++ IPK +++ +L L ++G+ DLF+ A+
Sbjct: 244 VIAAL-----SRDTINRWSAGLTSSQVDLYIPKVTISGVYDLGDVLEEMGIADLFTTQAN 298
Query: 262 LSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFL 320
SR+T + VHKA L L+E+GT AA A + A S+P+ N PF+ +
Sbjct: 299 FSRITQDAQLKSSKVVHKAVLQLNEEGTEAAGAMFLEAIPRSKPIILR---FNQPFIIMI 355
Query: 321 VDKEIQSILFAGVFNEP 337
D S LF P
Sbjct: 356 FDHFTWSSLFLARVMNP 372
>1qmn_A AACT, alpha-1-antichymotrypsin; serpin, serine proteinase
inhibitor, partial loop insertion, loop-sheet
polymerization, emphysema, disease mutation; 2.27A {Homo
sapiens} SCOP: e.1.1.1 PDB: 3dlw_A
Length = 401
Score = 247 bits (632), Expect = 2e-79
Identities = 104/377 (27%), Positives = 170/377 (45%), Gaps = 51/377 (13%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
+F F L L KNV SP SI AL ++ T + + L+ NL +
Sbjct: 33 DFAFSLYKQLVLKAPDKNVIFSPPSISTALAFLSLGAHNTTLTEILKGLKF--NLTETSE 90
Query: 61 MNVYK-MEKLIQGLRANADSGLTFTSTNKIFVNDKIPVK----ECMTAIFPSEIQSMDFG 115
+++ + L++ L + L + N +FV +++ + E ++ SE + DF
Sbjct: 91 AEIHQSFQHLLRTLN-QSSDELQLSMGNAMFVKEQLSLLDRFTEDAKRLYGSEAFATDFQ 149
Query: 116 NEVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WLP-----STQES 161
+ A + IN +V T+ I DLI ++S+T +VL W T +S
Sbjct: 150 DSAAAKKLINDYVKNGTRGKITDLI--KDLDSQTMMVLVNYIFFKAKWEMPFDPQDTHQS 207
Query: 162 I------IIITV-------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVG 202
+ V EL+ ++E+ Y G N S F+LP QD +
Sbjct: 208 RFYLSKKKWVMVPMMSLHHLTIPYFRDEELSCTVVELKYTG-NASALFILPD---QDKME 263
Query: 203 DILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADL 262
++ A L P + KR+ + + + E+ +PKFS++++ NL L LG+++ F+ ADL
Sbjct: 264 EVEAML--LPETLKRWRDSLEFREIGELYLPKFSISRDYNLNDILLQLGIEEAFTSKADL 321
Query: 263 SRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAV-FAFRSSRPLEPVRYEANHPFLYFL 320
S +T + +A VHKA LD+ E+GT A+AATAV S+ N PFL +
Sbjct: 322 SGITGARNLAVSQVVHKAVLDVFEEGTEASAATAVKITLLSALVETRTIVRFNRPFLMII 381
Query: 321 VDKEIQSILFAGVFNEP 337
V + Q+I F P
Sbjct: 382 VPTDTQNIFFMSKVTNP 398
>3b9f_I Protein C inhibitor; michaelis complex, acute phase, blood
coagulation, cleavage of basic residues, disease
mutation; HET: NAG FUC SGN IDS; 1.60A {Homo sapiens}
PDB: 2ol2_A*
Length = 395
Score = 246 bits (631), Expect = 3e-79
Identities = 102/377 (27%), Positives = 171/377 (45%), Gaps = 57/377 (15%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
+FTFDL L +A +N+F SP SI +L + +T+ + + L L NL K
Sbjct: 36 DFTFDLYRALASAAPSQNIFFSPVSISMSLAMLSLGAGSSTKMQILEGLGL--NLQKSSE 93
Query: 61 MNVYKM-EKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFG 115
+++ ++L+Q L G + N +F + + +++ M ++ ++ +F
Sbjct: 94 KELHRGFQQLLQELN-QPRDGFQLSLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFR 152
Query: 116 NEVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL-----PSTQES 161
+ A + IN +VA++TK I DL+ ++S +++ W TQE
Sbjct: 153 DSAGAMKQINDYVAKQTKGKIVDLLK--NLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQ 210
Query: 162 IIIIT------------------VLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203
+T +L L+ ++ VPY+G N + F+LP + +
Sbjct: 211 DFYVTSETVVRVPMMSREDQYHYLLDRNLSCRVVGVPYQG-NATALFILPS---EGKMQQ 266
Query: 204 ILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGAD 261
+ L S K + + K +E+ +PKFS+ L L LG+ ++F+ AD
Sbjct: 267 VENGL-----SEKTLRKWLKMFKKRQLELYLPKFSIEGSYQLEKVLPSLGISNVFTSHAD 321
Query: 262 LSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFL 320
LS +++ I + VHKA +++DE GT AAAAT S L R N PFL F+
Sbjct: 322 LSGISNHSNIQVSEMVHKAVVEVDESGTRAAAATGTIFTFRSARLNSQRLVFNRPFLMFI 381
Query: 321 VDKEIQSILFAGVFNEP 337
VD +ILF G N P
Sbjct: 382 VDN---NILFLGKVNRP 395
>2ceo_A Thyroxine-binding globulin; transport, serpin, hormone trans
thyroxine, disease mutation, glycoprotein; HET: T44;
2.80A {Homo sapiens}
Length = 379
Score = 245 bits (627), Expect = 5e-79
Identities = 89/378 (23%), Positives = 158/378 (41%), Gaps = 54/378 (14%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
+F F+L KN+F SP SI AL+ F + +T+ + + L +
Sbjct: 12 DFAFNLYRRFTVETPDKNIFFSPVSISAALVMLSFGACCSTQTEIVETLGFNLTDTPMVE 71
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFGN 116
+ + + LI L L N +F+ + + ++ +E+ S DF N
Sbjct: 72 IQ-HGFQHLICSLN-FPKKELELQIGNALFIGKHLKPLAKFLNDVKTLYETEVFSTDFSN 129
Query: 117 EVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WLP-----STQESI 162
A + INS V +TK + LI + T +VL W T++S
Sbjct: 130 ISAAKQEINSHVEMQTKGKVVGLIQ--DLKPNTIMVLVNYIHFKAQWANPFDPSKTEDSS 187
Query: 163 I-------IITV------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203
+ V + ELN +L++ Y +++F L + +
Sbjct: 188 SFLIDKTTTVQVPMMHQMEQYYHLVDMELNCTVLQMDYSKNALALFVLPK----EGQMES 243
Query: 204 ILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGAD 261
+ AA+ S K + ++ L+ V++ +PKFS++ +L TL +G++ +S AD
Sbjct: 244 VEAAM-----SSKTLKKWNRLLQKGWVDLFVPKFSISATYDLGATLLKMGIQHAYSENAD 298
Query: 262 LSRLT-DSHIAFGDAVHKARLDLDEQGTTAAAATAV-FAFRSSRPLEPVRYEANHPFLYF 319
S LT D+ + +A HKA L + E+GT AAA V + + + + F+
Sbjct: 299 FSGLTEDNGLKLSNAAHKAVLHIGEKGTEAAAVPEVELSDQPENTFLHPIIQIDRSFMLL 358
Query: 320 LVDKEIQSILFAGVFNEP 337
++++ +SILF G P
Sbjct: 359 ILERSTRSILFLGKVVNP 376
>1lj5_A Plasminogen activator inhibitor-1; beta-barrell, blood clotting;
1.80A {Homo sapiens} SCOP: e.1.1.1 PDB: 1dvn_A 1c5g_A
1a7c_A* 3q02_A 3q03_A 3r4l_A* 1oc0_A 1b3k_A 3pb1_I
1dvm_A 3eox_A 3cvm_A 1db2_A 9pai_A 3lw2_A 9pai_B
Length = 379
Score = 245 bits (627), Expect = 6e-79
Identities = 87/380 (22%), Positives = 154/380 (40%), Gaps = 57/380 (15%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
+F + + A+K +NV SP+ + L + T+ ++ + +D
Sbjct: 14 DFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAMGF--KIDDKGM 71
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKEC----MTAIFPSEIQSMDFGN 116
+ L + L + ++T+ IFV + + + +F S ++ +DF
Sbjct: 72 APALR--HLYKELM-GPWNKDEISTTDAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSE 128
Query: 117 EVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL-----PSTQESI 162
A IN WV TK I +L+ G V+ T LVL W ST +
Sbjct: 129 VERARFIINDWVKTHTKGMISNLLGKGAVDQLTRLVLVNALYFNGQWKTPFPDSSTHRRL 188
Query: 163 ------IIITV------------LSSELNAH---ILEVPYKGGNMSMFFLLPPFASQDGV 201
++V + + H ILE+PY G +SMF P + + +
Sbjct: 189 FHKSDGSTVSVPMMAQTNKFNYTEFTTPDGHYYDILELPYHGDTLSMFIAAP-YEKEVPL 247
Query: 202 GDILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPG 259
+ L S + + N+ + +PKFSL E++L L +LG+ D+F
Sbjct: 248 SALTNIL-----SAQLISHWKGNMTRLPRLLVLPKFSLETEVDLRKPLENLGMTDMFRQF 302
Query: 260 -ADLSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFL 317
AD + L+D + A+ K +++++E GT A+++TAV P + PFL
Sbjct: 303 QADFTSLSDQEPLHVAQALQKVKIEVNESGTVASSSTAVIVSARMAP---EEIIMDRPFL 359
Query: 318 YFLVDKEIQSILFAGVFNEP 337
+ + ++LF G EP
Sbjct: 360 FVVRHNPTGTVLFMGQVMEP 379
>3ne4_A Alpha-1-antitrypsin; serpin, LUNG disease, liver disease,
polymerisation, hydrolase inhibitor; 1.81A {Homo
sapiens} PDB: 1qlp_A 2qug_A 3cwl_A 3cwm_A* 1psi_A 3drm_A
1kct_A 3dru_A 1hp7_A 1iz2_A* 1oph_A 1oo8_A 1atu_A 1d5s_B
1qmb_B
Length = 424
Score = 244 bits (626), Expect = 2e-78
Identities = 96/380 (25%), Positives = 169/380 (44%), Gaps = 57/380 (15%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
EF F L L + + N+F SP SI A + +T + + L NL ++
Sbjct: 62 EFAFSLYRQLAHQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNF--NLTEIPE 119
Query: 61 MNVYKM-EKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFG 115
+++ ++L++ L DS L T+ N +F+++ + + + + ++ SE +++FG
Sbjct: 120 AQIHEGFQELLRTLN-QPDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFG 178
Query: 116 NEVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WLP-----STQES 161
+ EA + IN +V + T+ I DL+ +++ T L W T+E
Sbjct: 179 DTEEAKKQINDYVEKGTQGKIVDLVK--ELDRDTVFALVNYIFFKGKWERPFEVKDTEEE 236
Query: 162 I------IIITV------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203
+ V +L++ +L + Y G N + F LP + +
Sbjct: 237 DFHVDQVTTVKVPMMKRLGMFNIQHCKKLSSWVLLMKYLG-NATAIFFLP---DEGKLQH 292
Query: 204 ILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGAD 261
+ L + T+ +N + +PK S+T +L L LG+ +FS GAD
Sbjct: 293 LENEL-----THDIITKFLENEDRRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGAD 347
Query: 262 LSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFL 320
LS +T+ + AVHKA L +DE+GT AA A + A S P E + N PF++ +
Sbjct: 348 LSGVTEEAPLKLSKAVHKAVLTIDEKGTEAAGAMFLEAIPMSIPPE---VKFNKPFVFLM 404
Query: 321 VDKEIQSILFAGVFNEPPNK 340
+++ +S LF G P K
Sbjct: 405 IEQNTKSPLFMGKVVNPTQK 424
>4dy0_A GLIA-derived nexin; serpin, protease inhibitor, thrombin, cell
surface, hydrolas inhibitor; HET: IDS SGN; 2.35A {Homo
sapiens} PDB: 4dy7_C
Length = 379
Score = 243 bits (623), Expect = 3e-78
Identities = 81/382 (21%), Positives = 157/382 (41%), Gaps = 61/382 (15%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
+ + + N+ +SP I L ++ T+ L V+R N
Sbjct: 14 NTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLAMVMRYGVN----GV 69
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKEC----MTAIFPSEIQSMDFGN 116
+ K K+ + + + + T N +FV + ++ +F E+++++F +
Sbjct: 70 GKILK--KINKAIV-SKKNKDIVTVANAVFVKNASEIEVPFVTRNKDVFQCEVRNVNFED 126
Query: 117 EVEAARAINSWVAQETKNNIKDLIATGQVNS-RTNLVL---------WL-----PSTQES 161
A +IN+WV ET++ I +L++ ++ T LVL W +T++
Sbjct: 127 PASACDSINAWVKNETRDMIDNLLSPDLIDGVLTRLVLVNAVYFKGLWKSRFQPENTKKR 186
Query: 162 I---------------------IIITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDG 200
T ++L + +E+PY G ++SM LP +S
Sbjct: 187 TFVAADGKSYQVPMLAQLSVFRCGSTSAPNDLWYNFIELPYHGESISMLIALPTESS-TP 245
Query: 201 VGDILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSP 258
+ I+ + S K + P V++ +PKF+ + +L L LG+ D+F
Sbjct: 246 LSAIIPHI-----STKTIDSWMSIMVPKRVQVILPKFTAVAQTDLKEPLKVLGITDMFDS 300
Query: 259 G-ADLSRLTDSH--IAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHP 315
A+ +++T + + KA++++ E GT A+AAT S P + + P
Sbjct: 301 SKANFAKITTGSENLHVSHILQKAKIEVSEDGTKASAATTAILIARSS---PPWFIVDRP 357
Query: 316 FLYFLVDKEIQSILFAGVFNEP 337
FL+F+ ++LF G N+P
Sbjct: 358 FLFFIRHNPTGAVLFMGQINKP 379
>1sng_A COG4826: serine protease inhibitor; serine protease inhibitor
(serpin), native state., hydrolase inhibitor; 1.76A
{Thermobifida fusca} SCOP: e.1.1.1
Length = 370
Score = 243 bits (622), Expect = 3e-78
Identities = 82/373 (21%), Positives = 138/373 (36%), Gaps = 61/373 (16%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
EF L L A V SP+S+ AL + T L +L
Sbjct: 16 EFALHLHRRLAEAVPDGEVIWSPYSVAXALGVLAAGARATTRTELTTLLGTDP------- 68
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFGN 116
L+ L S ++V+ +PV+ M S++++ DF
Sbjct: 69 ------APLLAALDRAVTDSPDLASRTVLWVSADVPVRSSFRATMHDRPDSDVRTADFRT 122
Query: 117 EVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL-----PSTQES 161
E RA +N+ +A T+ I++L+ G V +L W T+
Sbjct: 123 NPEGVRATVNADIADATRGMIRELLPQGAVTPDLRAILTNALWAKARWTTPFEAHLTRAG 182
Query: 162 IIII---TV------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGDILA 206
++ ++ + +++ LLPP + A
Sbjct: 183 TFRTPRGPKRVPFMHRTKTMPYATARGWRMVTLHA-HDELAVDVLLPPG------TNAAA 235
Query: 207 ALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLT 266
S + VE+A+P+F LTQ L+ L++ GV+ LF+ ADLS ++
Sbjct: 236 VPTAP--LLTALHRRSASTS-VELALPRFELTQPHQLVEVLAEAGVRTLFTASADLSGIS 292
Query: 267 DSHIAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSR--PLEPVRYEANHPFLYFLVDKE 324
+ +H+ARL +DE+G AAATA + P +R+ + PF + +
Sbjct: 293 TVPLYVDTVIHQARLRVDERGAEGAAATAAMMLLAGAMPPRRTIRFSVDRPFHIVVRRR- 351
Query: 325 IQSILFAGVFNEP 337
+ILF G +P
Sbjct: 352 -GAILFLGSIADP 363
>1jmo_A HC-II, heparin cofactor II, HLS2, serin; serpin, thrombin,
protease, inhibition, inhibitor, blood CLO; HET: TYS NDG
NAG; 2.20A {Homo sapiens} SCOP: e.1.1.1 PDB: 1jmj_A*
Length = 480
Score = 245 bits (627), Expect = 8e-78
Identities = 77/379 (20%), Positives = 153/379 (40%), Gaps = 56/379 (14%)
Query: 1 EFTFDLLTVL-NNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLD 59
+F F+L VL + N N+F++P I A+ T + +L + ++
Sbjct: 113 KFAFNLYRVLKDQVNTFDNIFIAPVGISTAMGMISLGLKGETHEQVHSILHFKDFVNASS 172
Query: 60 TMNVYKMEKLIQGLRA---NADSGLTFTSTNKIFVNDKIPVK----ECMTAIFPSEIQSM 112
+ + L + L + G T S N +++ + P+ + + +E Q
Sbjct: 173 KYEITTIHNLFRKLTHRLFRRNFGYTLRSVNDLYIQKQFPILLDFKTKVREYYFAEAQIA 232
Query: 113 DFGNEVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WLP-----ST 158
DF + ++ N+ + + TK IKD + ++ T +++ W+ T
Sbjct: 233 DFSDPAFISK-TNNHIMKLTKGLIKDAL--ENIDPATQMMILNCIYFKGSWVNKFPVEMT 289
Query: 159 QESI------IIITV------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDG 200
++ V EL+ IL++ Y G +SM ++P G
Sbjct: 290 HNHNFRLNEREVVKVSMMQTKGNFLAANDQELDCDILQLEYVG-GISMLIVVP--HKMSG 346
Query: 201 VGDILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSP 258
+ + A L + + +++ E+ +PKF L + NL+ +L +G++ LF
Sbjct: 347 MKTLEAQL-----TPRVVERWQKSMTNRTREVLLPKFKLEKNYNLVESLKLMGIRMLFDK 401
Query: 259 GADLSRLTDSHIAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLY 318
+++ ++D IA H+ + ++E+GT A T V S VR+ + PFL+
Sbjct: 402 NGNMAGISDQRIAIDLFKHQGTITVNEEGTQATTVTTVGFMPLS---TQVRFTVDRPFLF 458
Query: 319 FLVDKEIQSILFAGVFNEP 337
+ + +LF G P
Sbjct: 459 LIYEHRTSCLLFMGRVANP 477
>4au2_A HSP47, serpin peptidase inhibitor, clade H (heat shock P 47),
member 1, (collagen binding...; chaperone-peptide
complex; 2.30A {Canis lupus familiaris} PDB: 4au3_A
4au4_A 4awr_A 4au3_B
Length = 392
Score = 240 bits (615), Expect = 5e-77
Identities = 63/377 (16%), Positives = 127/377 (33%), Gaps = 56/377 (14%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
F L + +N+ +SP + +L T + K VL + L +
Sbjct: 15 GLAFSLYQAMAKDQAVENILLSPVVVASSLGLVSLGGKATTASQAKAVLSAEQ-LRDEEV 73
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFGN 116
+L++ L + +T+ ++++ + E + E ++F +
Sbjct: 74 HAGLG--ELLRSLSNSTARNVTWKLGSRLYGPSSVSFAEDFVRSSKQHYNCEHSKINFRD 131
Query: 117 EVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL-----PSTQESI 162
+ A ++IN W AQ T + ++ V +L W
Sbjct: 132 KRSALQSINEWAAQTTDGKLPEVT--KDVERTDGALLVNAMFFKPHWDEKFHHKMVDNRG 189
Query: 163 ------IIITV------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGDI 204
+ V + I+E+P S+ L+P + + +
Sbjct: 190 FMVTRSYTVGVTMMHRTGLYNYYDDEKEKLQIVEMPLAHKLSSLIILMP--HHVEPLERL 247
Query: 205 LAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPG-AD 261
L + ++ ++ V I++PK + +L L+ LG+ + AD
Sbjct: 248 EKLL-----TKEQLKIWMGKMQKKAVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKNKAD 302
Query: 262 LSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFL 320
LSR++ + H + D +G S P + A+HPF++ +
Sbjct: 303 LSRMSGKKDLYLASVFHATAFEWDTEGNPFDQDIYGREELRS----PKLFYADHPFIFLV 358
Query: 321 VDKEIQSILFAGVFNEP 337
D + S+LF G P
Sbjct: 359 RDTQSGSLLFIGRLVRP 375
>2v95_A Corticosteroid-binding globulin; transport protein, CBG, RCL,
serpin, secreted, transport, glycoprotein,
lipid-binding, glucocorticoids; HET: HCY; 1.93A {Rattus
norvegicus}
Length = 371
Score = 239 bits (613), Expect = 6e-77
Identities = 90/376 (23%), Positives = 147/376 (39%), Gaps = 59/376 (15%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
+F F+L L N KN +SP SI AL S + Q L NL +
Sbjct: 15 DFAFNLYQRLVALNPDKNTLISPVSISMALAMVSLGSAQTQ---SLQSLGF--NLTETSE 69
Query: 61 MNVYKM-EKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFG 115
+++ + L L+ +D+GL N +F+ K+ +K+ + + SE ++DF
Sbjct: 70 AEIHQSFQYLNYLLK-QSDTGLEMNMGNAMFLLQKLKLKDSFLADVKQYYESEALAIDFE 128
Query: 116 NEVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WLP-----STQES 161
+ +A++ IN V +T+ I+ + + ++S + +L W +T+E
Sbjct: 129 DWTKASQQINQHVKDKTQGKIEHVFS--DLDSPASFILVNYIFLRGIWELPFSPENTREE 186
Query: 162 I------IIITV------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203
+ V S ++++ Y G + F L Q +
Sbjct: 187 DFYVNETSTVKVPMMVQSGSIGYFRDSVFPCQLIQMDYVGNGTAFFILPD----QGQMDT 242
Query: 204 ILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGAD 261
++AAL S + + P V + IPKFS++ +L L DL +KDL + +D
Sbjct: 243 VIAAL-----SRDTIDRWGKLMTPRQVNLYIPKFSMSDTYDLKDVLEDLNIKDLLTNQSD 297
Query: 262 LSRLTDSHIAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLV 321
S T VHKA L LDE + S PL+ N PF+ L
Sbjct: 298 FSGNTKDVPLTLTMVHKAMLQLDEGNVLPNSTNGAPLHLRSEPLDIK---FNKPFILLLF 354
Query: 322 DKEIQSILFAGVFNEP 337
DK S L P
Sbjct: 355 DKFTWSSLMMSQVVNP 370
>3le2_A Serpin-ZX; apoplast, glycoprotein, protease inhibitor, secreted,
serine protease inhibitor, hydrolase; 2.20A {Arabidopsis
thaliana}
Length = 393
Score = 239 bits (611), Expect = 2e-76
Identities = 84/386 (21%), Positives = 153/386 (39%), Gaps = 53/386 (13%)
Query: 1 EFTFDLL-TVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLD 59
+ + +L V+ ++ NV SP SI L S T+ + L+ + D+L+
Sbjct: 14 QVSMNLAKHVITTVSQNSNVIFSPASINVVLSIIAAGSAGATKDQILSFLKFS-STDQLN 72
Query: 60 TMNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVK----ECMTAIFPSEIQSMDFG 115
+ + + ++ +A+ G + N +++ + K + + + + DF
Sbjct: 73 SFSSEIVSAVLA--DGSANGGPKLSVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADFQ 130
Query: 116 NEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL-----PSTQE 160
++ A +NSW +ET I +++ G +S T L+ W TQE
Sbjct: 131 SKAVEVIAEVNSWAEKETNGLITEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQE 190
Query: 161 SI------IIITV----------LSSELNAHILEVPY----KGGNMSMFFLLPPFASQDG 200
+T +S+ +L +PY SM+F LP + +G
Sbjct: 191 GEFHLLDGNKVTAPFMTSKKKQYVSAYDGFKVLGLPYLQGQDKRQFSMYFYLP--DANNG 248
Query: 201 VGDILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGA 260
+ D+L + P Q K E IPKF + + L LG+ FS
Sbjct: 249 LSDLLDKIVSTPGFLDNHIPRRQV-KVREFKIPKFKFSFGFDASNVLKGLGLTSPFSGEE 307
Query: 261 DLSRLTDSHIAFGD-----AVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYE--AN 313
L+ + +S + HKA ++++E+GT AAAA+A +E + A+
Sbjct: 308 GLTEMVESPEMGKNLCVSNIFHKACIEVNEEGTEAAAASAGVIKLRGLLMEEDEIDFVAD 367
Query: 314 HPFLYFLVDKEIQSILFAGVFNEPPN 339
HPFL + + +LF G +P +
Sbjct: 368 HPFLLVVTENITGVVLFIGQVVDPLH 393
>2r9y_A Alpha-2-antiplasmin; inhibitory serpin, plasmin inhibitor, AC
phase, glycoprotein, protease inhibitor, secreted,
serine P inhibitor, sulfation; 2.65A {Mus musculus}
Length = 430
Score = 238 bits (610), Expect = 8e-76
Identities = 85/374 (22%), Positives = 151/374 (40%), Gaps = 62/374 (16%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
FT DL +++ + N+ +SP S+ AL + T +L +VL +
Sbjct: 27 AFTTDLFSLVAQTSTSSNLVLSPLSVALALSHLALGAQNQTLHSLHRVLHMNTGSC---- 82
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVK----ECMTAIFPSEIQSMDFGN 116
+ L+ T +I++ P+K E +F ++ +
Sbjct: 83 -----LPHLLSHFY-QNLGPGTIRLAARIYLQKGFPIKDDFLEQSERLFGAKPVKLTGKQ 136
Query: 117 EVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL----------------------- 153
E E IN WV + T+ I+D ++ ++ T L+L
Sbjct: 137 E-EDLANINQWVKEATEGKIEDFLS--ELPDSTVLLLLNAIHFHGFWRTKFDPSLTQKDF 193
Query: 154 -WLPST---------QESIIIITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203
L S + L + + P+K NMS ++P + V +
Sbjct: 194 FHLDERFTVSVDMMHAVSYPLRWFLLEQPEIQVAHFPFKN-NMSFVVVMPT-YFEWNVSE 251
Query: 204 ILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLS 263
+LA L ++ S +P ++ +PK L Q+++L+ TLS LG+++LF G DL
Sbjct: 252 VLANL-----TWDTLYHPSLQERPTKVWLPKLHLQQQLDLVATLSQLGLQELFQ-GPDLR 305
Query: 264 RLTDSHIAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLVDK 323
+++ ++ H++ ++L E G AAAAT+V R S + N PFL+F+++
Sbjct: 306 GISEQNLVVSSVQHQSTMELSEAGVEAAAATSVAMNRMSLS----SFTVNRPFLFFIMED 361
Query: 324 EIQSILFAGVFNEP 337
I LF G P
Sbjct: 362 TIGVPLFVGSVRNP 375
>3f1s_A Protein Z-dependent protease inhibitor; PZ, ZPI, complex, serpin,
protease inhibitor, protease, GLYC secreted, serine
protease inhibitor, blood coagulation; HET: FLC NAG;
2.30A {Homo sapiens} PDB: 3h5c_A*
Length = 385
Score = 236 bits (605), Expect = 2e-75
Identities = 84/377 (22%), Positives = 147/377 (38%), Gaps = 56/377 (14%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
F F LL ++ + G N+ SPF + A+ + TE +K+ L L
Sbjct: 22 NFGFSLLRKISMRHDG-NMVFSPFGMSLAMTGLMLGATGPTETQIKRGLHLQALKPTKPG 80
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVK----ECMTAIFPSEIQSMDFGN 116
+ + L + L + + L T + F++ VK F +E M+F N
Sbjct: 81 LLPSLFKGLRETL--SRNLELGLTQGSFAFIHKDFDVKETFFNLSKRYFDTECVPMNFRN 138
Query: 117 EVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WLP-----STQESI 162
+A R +N ++ +ET+ I L ++N T L+L WL T+
Sbjct: 139 ASQAKRLMNHYINKETRGKIPKLF--DEINPETKLILVDYILFKGKWLTPFDPVFTEVDT 196
Query: 163 ------IIITV------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGDI 204
I V H+L++PY+G N +M +L +
Sbjct: 197 FHLDKYKTIKVPMMYGAGKFASTFDKNFRCHVLKLPYQG-NATMLVVLME--KMGDHLAL 253
Query: 205 LAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADL 262
L + +N+K +E+ PKF L Q+ + L +G++ +FSP ADL
Sbjct: 254 EDYL-----TTDLVETWLRNMKTRNMEVFFPKFKLDQKYEMHELLRQMGIRRIFSPFADL 308
Query: 263 SRLTDSH--IAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFL 320
S L+ + + + + +++DE+GT A A S P + + PF + +
Sbjct: 309 SELSATGRNLQVSRVLQRTVIEVDERGTEAVAGILSEITAYSMPPV---IKVDRPFHFMI 365
Query: 321 VDKEIQSILFAGVFNEP 337
++ +LF G P
Sbjct: 366 YEETSGMLLFLGRVVNP 382
>2pef_A Serine protease inhibitor; serpin; 1.60A {Thermoanaerobacter
tengcongensis} PDB: 2vh4_A 2pee_A
Length = 373
Score = 235 bits (602), Expect = 2e-75
Identities = 75/377 (19%), Positives = 141/377 (37%), Gaps = 59/377 (15%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
+F+ +L + +N +SP S AL ++ T A +++ L +++ L+
Sbjct: 15 DFSIELFKNS--IDDKENSLISPLSAMLALAMTANGADNETLAQMEKALGKDISIEDLNK 72
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDK-IPVKE----CMTAIFPSEIQSMDFG 115
+ ++ L + T N I+ + + + + ++I F
Sbjct: 73 Y----LYTYMKKL--PNEEKSKLTIANSIWFKENDFMPSKDFLQIIADYYKADIFKAAFD 126
Query: 116 NEVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WLP-----STQES 161
+ IN+WV +T I ++ +++ + L W S E
Sbjct: 127 SS--TVSDINNWVKSKTNGMIDKIL--NKIDPEDVMYLINAVAFDAEWETVYEKASVHED 182
Query: 162 I---------------IIITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGDILA 206
I + E NA PY + S +LP V + +
Sbjct: 183 IFTDVYGNRQKVEFMNSEENLYIEEENAVGFVKPYAKNHYSFVAILP--DENISVNEYIK 240
Query: 207 ALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPG-ADLS 263
L + ++F + +N K V ++PKF + + TL LG+ D F P AD S
Sbjct: 241 TL-----TGQKFIDLIKNAKITLVRASLPKFKYEYTIKMNETLESLGMTDAFLPDKADFS 295
Query: 264 RLTDS---HIAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFL 320
+L S ++ + +HK + +DE GT A A T+V + P+ + N PF++ +
Sbjct: 296 KLGKSDIGNLYISEVLHKTFISVDELGTKAGAVTSVDITAAGIPVNFKTVKLNRPFIFAI 355
Query: 321 VDKEIQSILFAGVFNEP 337
+D +F G
Sbjct: 356 IDNSTNLPIFIGTVLSL 372
>3ozq_A Serpin48; SPE, hydrolase I; 1.90A {Tenebrio molitor}
Length = 376
Score = 235 bits (601), Expect = 4e-75
Identities = 86/379 (22%), Positives = 158/379 (41%), Gaps = 62/379 (16%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
FT + + + N VSPFS L A +T ++QVL + +K +
Sbjct: 17 SFTPSVYKEVL-KTEKANFLVSPFSAATLLALAQSGCRGDTAEEIRQVLHFVGDREKAEG 75
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFGN 116
+++++ L + T + NKI+V V+E ++ ++ +++DF
Sbjct: 76 ----AVKEVLSKLT---NEEYTLHTANKIYVKTNFSVREEFQKIAVEVYGAQSENVDFSE 128
Query: 117 EVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WLP----------- 156
+ +AA+ +N+WV ++T++ I++L+ +N+ T +VL WL
Sbjct: 129 KNDAAKLMNAWVEEQTQHKIQNLVDPEILNNLTRVVLINALYFNAKWLVPFPPFHTRKSD 188
Query: 157 --------------STQESIIIITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVG 202
E L+A +LE+P+KG S+ +L +G+
Sbjct: 189 FHKSAKEVVQVDTMYLDEQYFNYYECH-HLDAKLLELPFKG-GASLTIVLS--NQIEGLV 244
Query: 203 DILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADL 262
+ + + + V +A+PKF + ++ L LGVK F ADL
Sbjct: 245 SLESKI-----KRSFLPHNLTKQL-VNVALPKFKIESTVDFKKVLKKLGVKKAFGDEADL 298
Query: 263 SRLTDS--HIAFGDAVHKARLDLDEQGTTAAAATAV-FAFRSSR-PLEPVRYEANHPFLY 318
S + + + V K+ +D+ E+G AAAAT + P P ++ +HPF++
Sbjct: 299 SGIAGEKGDLVISNIVQKSFIDVSEEGVEAAAATYIPVILPEMALPDSPKQFIVDHPFIF 358
Query: 319 FLVDKEIQSILFAGVFNEP 337
++ K ILFAG
Sbjct: 359 YIKVK--GMILFAGRVTTL 375
>1imv_A PEDF, pigment epithelium-derived factor; serpin, angiogenesis,
signaling protein; HET: NAG; 2.85A {Homo sapiens} SCOP:
e.1.1.1
Length = 398
Score = 235 bits (602), Expect = 6e-75
Identities = 73/376 (19%), Positives = 146/376 (38%), Gaps = 59/376 (15%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
F +DL V ++ + NV +SP S+ AL +++ TE+ + + L + D
Sbjct: 40 NFGYDLYRVRSSMSPTTNVLLSPLSVATALSALSLGADERTESIIHRALYYDL-ISSPDI 98
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFGN 116
YK +L+ + S ++I K+ +K + + + + +
Sbjct: 99 HGTYK--ELLDTVT---APQKNLKSASRIVFEKKLRIKSSFVAPLEKSYGTRPRVLTGNP 153
Query: 117 EVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL-----PSTQESI 162
+ IN+WV + K + ++ +++L W+ T
Sbjct: 154 R-LDLQEINNWVQAQMKGKLARST--KEIPDEISILLLGVAHFKGQWVTKFDSRKTSLED 210
Query: 163 ------IIITV-------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203
+ V L S+L+ I ++P G +MS+ F LP + +
Sbjct: 211 FYLDEERTVRVPMMSDPKAVLRYGLDSDLSCKIAQLPLTG-SMSIIFFLPLKVT-QNLTL 268
Query: 204 ILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGAD 261
I +L + + + + LK + +PK L+ E + +L ++ ++ LF D
Sbjct: 269 IEESL-----TSEFIHDIDRELKTVQAVLTVPKLKLSYEGEVTKSLQEMKLQSLFD-SPD 322
Query: 262 LSRLTDSHIAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFLV 321
S++T I H+A + +E G + + + PL+ Y N PF++ L
Sbjct: 323 FSKITGKPIKLTQVEHRAGFEWNEDGAGTTPSPGLQPAHLTFPLD---YHLNQPFIFVLR 379
Query: 322 DKEIQSILFAGVFNEP 337
D + ++LF G +P
Sbjct: 380 DTDTGALLFIGKILDP 395
>2oay_A C1-inhibitor, plasma protease C1 inhibitor, C1 INH, C1INH; latent
serpin, RCL insertion, immune system,hydrolase inhibi;
HET: NAG; 2.35A {Homo sapiens}
Length = 390
Score = 227 bits (582), Expect = 5e-72
Identities = 78/377 (20%), Positives = 150/377 (39%), Gaps = 66/377 (17%)
Query: 1 EFTFDLLTVLNNANK-GKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLD 59
+F+ L + K N+ SPFSI L + +NT+ NL+ +L P++ +
Sbjct: 38 DFSLKLYHAFSAMKKVETNMAFSPFSIASLLTQVLLGAGENTKTNLESILSYPKDFTCV- 96
Query: 60 TMNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVK----ECMTAIFPSEIQSMDFG 115
+ ++G + TS ++IF + + ++ ++ S + +
Sbjct: 97 -------HQALKGF-----TTKGVTSVSQIFHSPDLAIRDTFVNASRTLYSSSPRVLSNN 144
Query: 116 NEVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------------------- 153
++ IN+WVA+ T N I L+ + S T LVL
Sbjct: 145 SD-ANLELINTWVAKNTNNKISRLL--DSLPSDTRLVLLNAIYLSAKWKTTFDPKKTRME 201
Query: 154 --WLPST--------QESIIIITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203
++ + + + L A + ++ N+S+ L+P + + D
Sbjct: 202 PFHFKNSVIKVPMMNSKKYPVAHFIDQTLKAKVGQLQLSH-NLSLVILVPQ-NLKHRLED 259
Query: 204 ILAALKKDPTSFKRFTEDSQNLK--PVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGAD 261
+ AL P+ FK E + K P + +P+ +T +++ + L D +
Sbjct: 260 MEQAL--SPSVFKAIMEKLEMSKFQPTLLTLPRIKVTTSQDMLSIMEKLEFFDFSY-DLN 316
Query: 262 LSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEANHPFLYFL 320
L LT+ + H+ L+L E G AAAA+A+ R+ + +E PFL+ L
Sbjct: 317 LCGLTEDPDLQVSAMQHQTVLELTETGVEAAAASAISVART-----LLVFEVQQPFLFML 371
Query: 321 VDKEIQSILFAGVFNEP 337
D++ + +F G +P
Sbjct: 372 WDQQHKFPVFMGRVYDP 388
>2wxw_A Angiotensinogen, serpin A8; glycoprotein, hypertension,
vasoconstrictor, renin, serpins, vasoactive, hormone;
3.30A {Homo sapiens} PDB: 2x0b_B
Length = 453
Score = 228 bits (584), Expect = 1e-71
Identities = 51/386 (13%), Positives = 129/386 (33%), Gaps = 65/386 (16%)
Query: 1 EFTFDLLTVLNNANK--GKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPE-NLDK 57
F + + + +SP +++ L + Y + +T L+ +L +P + +
Sbjct: 80 FLGFRIYGMHSELWGVVHGATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKNC 139
Query: 58 LDTMNVYKMEKLIQGL--------RANADSGLTFTSTNKIFVNDKIPVKE----CMTAIF 105
++ +K+ +Q + RA++ + L ++ +F + +K+ +
Sbjct: 140 TSRLDAHKVLSALQAVQGLLVAQGRADSQAQLLLSTVVGVFTAPGLHLKQPFVQGLALYT 199
Query: 106 PSEI-QSMDFGNEVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL----------- 153
P + +S+DF AA I+ ++ T + + + L
Sbjct: 200 PVVLPRSLDFTELDVAAEKIDRFMQAVTGWKTGCSLM--GASVDSTLAFNTYVHFQGKMK 257
Query: 154 -----------WLPST---------QESIIIITVLSSELNAHILEVPYKGGNMSMFFLLP 193
W+ ++ + N + +VP+ + + + P
Sbjct: 258 GFSLLAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDI-QDNFSVTQVPFTE-SACLLLIQP 315
Query: 194 PFASQDGVGDILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLG 251
+ + + + L P + + +P+ L +L L+
Sbjct: 316 --HYASDLDKVEGLT-----FQQNSLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAE 368
Query: 252 VKDLFSPGADLSRLTDSHIAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYE 311
+ + +L +L++ I G+ ++ +L+ +T E +
Sbjct: 369 LPAILHTELNLQKLSNDRIRVGEVLNSIFFELEADEREPTESTQQLNKP-----EVLEVT 423
Query: 312 ANHPFLYFLVDKEIQSILFAGVFNEP 337
N PFL+ + D+ ++ F G P
Sbjct: 424 LNRPFLFAVYDQSATALHFLGRVANP 449
>2wxy_C Angiotensinogen, serpin A8; glycoprotein, hypertension,
vasoconstrictor, renin, serpins, vasoactive, hormone;
2.10A {Mus musculus} PDB: 2wxx_A 2wy0_C 2wxz_A 2wxz_C
2wy1_A
Length = 453
Score = 225 bits (576), Expect = 1e-70
Identities = 67/385 (17%), Positives = 142/385 (36%), Gaps = 62/385 (16%)
Query: 1 EFTFDLLTVLNNANKG-KNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPEN----L 55
F + +LN A G +SP +++ L++ Y S T + L+ +L +P
Sbjct: 79 FVGFRMYKMLNEAGSGASGAILSPPALFGTLVSFYLGSLDPTASQLQTLLDVPVKEGDCT 138
Query: 56 DKLDTMNVYKMEKLIQGL-----RANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFP 106
+LD V + +QGL +++ + L + +F +K + P
Sbjct: 139 SRLDGHKVLAALRAVQGLLVTQGGSSSQTPLLQSIVVGLFTAPGFRLKHSFVQSLALFTP 198
Query: 107 SEI-QSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL---------W- 154
+ +S+D + A IN ++ T + + V++ + L+
Sbjct: 199 ALFPRSLDLSTDPVLATEKINRFIKAVTGWKMNLPL--EGVSTDSTLLFNTYVHFQGTMR 256
Query: 155 ----LPSTQESII----IITV------------LSSELNAHILEVPYKGGNMSMFFLLPP 194
LP E + ++V ++ N + VP G ++ + P
Sbjct: 257 GFSQLPGVHEFWVDNSISVSVPMISGTGNFQHWSDAQNNFSVTCVPL-GERATLLLIQP- 314
Query: 195 FASQDGVGDILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGV 252
+ + A + +N P + + +P+ + NL L++ +
Sbjct: 315 -HCISDLDRVEALI-----FQNDLLTWIENPPPRAIRLTLPQLEIRGSYNLQDLLAEDKL 368
Query: 253 KDLFSPGADLSRLTDSHIAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRPLEPVRYEA 312
L A+L+ + D++ G+ ++ L+L G T+V S E +
Sbjct: 369 PTLLGAEANLNNIGDTNPRVGEVLNSILLELKA-GEEEQPTTSVQQPGSP---EALDVTL 424
Query: 313 NHPFLYFLVDKEIQSILFAGVFNEP 337
+ PFL+ + +++ ++ F G N P
Sbjct: 425 SSPFLFAIYEQDSGTLHFLGRVNNP 449
>2h4p_A MENT, heterochromatin-associated protein MENT; serine protease
inhibitor, serpin, hydrolase inhibitor; 1.70A {Gallus
gallus} PDB: 2h4q_A
Length = 394
Score = 221 bits (564), Expect = 2e-69
Identities = 87/361 (24%), Positives = 150/361 (41%), Gaps = 67/361 (18%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
FT DL LN N+ KN+F SP+SI AL Y + +T + +VL E + +
Sbjct: 35 NFTVDLFNKLNETNRDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHFTEAVRAESS 94
Query: 61 MNVYKMEKLIQGLRA----------------------NADSGLTFTSTNKIFVNDKIPVK 98
+ R + + S N+I+V +
Sbjct: 95 SVARPSRGRPKRRRMDPEHEQAENIHSGFKELLTAFNKPRNNYSLRSANRIYVEKTYALL 154
Query: 99 E----CMTAIFPSEIQSMDFGNEVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL 153
+ +E Q ++F E +R IN+WV ++T++ IK+L+++ V + T L+L
Sbjct: 155 PTYLQLSKKYYKAEPQKVNFKTAPEQSRKEINTWVEKQTESKIKNLLSSDDVKATTRLIL 214
Query: 154 ---------WLP-----STQESIIIIT------------------VLSSELNAHILEVPY 181
W T ++ ++ ++N ++E+PY
Sbjct: 215 VNAIYFKAEWEVKFQAEKTSIQPFRLSKNKSKPVKMMYMRDTFPVLIMEKMNFKMIELPY 274
Query: 182 KGGNMSMFFLLP--PFASQDGVGDILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSL 237
+SMF LLP G+ + L + DS+ + V++ +PKFSL
Sbjct: 275 VKRELSMFILLPDDIKDGTTGLEQLEREL--TYERLSEWA-DSKMMTETLVDLHLPKFSL 331
Query: 238 TQEMNLIPTLSDLGVKDLFSPGADLSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAV 296
++L TL ++G+ F+ AD +TD +A +H++ + +DE+GT AAAATAV
Sbjct: 332 EDRIDLRDTLRNMGMTTAFTTNADFRGMTDKKDLAISKVIHQSFVAVDEKGTEAAAATAV 391
Query: 297 F 297
Sbjct: 392 I 392
>1hle_A Horse leukocyte elastase inhibitor; hydrolase inhibitor(serine
proteinase); 1.95A {Equus caballus} SCOP: e.1.1.1
Length = 345
Score = 216 bits (552), Expect = 4e-68
Identities = 91/339 (26%), Positives = 150/339 (44%), Gaps = 52/339 (15%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
F DL LN ++ N+F+SP SI AL + + NT A + + L D
Sbjct: 11 HFAVDLFRALNESDPTGNIFISPLSISSALAMIFLGTRGNTAAQVSKALYFDT---VEDI 67
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFGN 116
+ ++ L + + N+++ ++ +E+ S+DF
Sbjct: 68 HSRFQ--SLNADIN-KPGAPYILKLANRLYGEKTYNFLADFLASTQKMYGAELASVDFQQ 124
Query: 117 EVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL-----PSTQES 161
E AR IN WV +T+ I +L+ G V++ T LVL W +T+++
Sbjct: 125 APEDARKEINEWVKGQTEGKIPELLVKGMVDNMTKLVLVNAIYFKGNWQQKFMKEATRDA 184
Query: 162 I------IIITV------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203
TV +L +LE+PY+G +SM LLP + G
Sbjct: 185 PFRLNKKDTKTVKMMYQKKKFPYNYIEDLKCRVLELPYQGKELSMIILLPDDIEDESTG- 243
Query: 204 ILAALKK--DPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPG 259
L ++K + +T +NL V + +P+F L + +L L+ LGV+DLF+ G
Sbjct: 244 -LEKIEKQLTLDKLREWT-KPENLYLAEVNVHLPRFKLEESYDLTSHLARLGVQDLFNRG 301
Query: 260 -ADLSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAV 296
ADLS ++ + + +HK+ +DL+E+GT AAAATA
Sbjct: 302 KADLSGMSGARDLFVSKIIHKSFVDLNEEGTEAAAATAG 340
>3f02_A Neuroserpin; cleaved form, fenib, human, disease MUT glycoprotein,
protease inhibitor, secreted, serine protease inhibitor,
hydrolase inhibitor; 1.80A {Homo sapiens} PDB: 3fgq_A
1jjo_C 1jjo_A
Length = 359
Score = 215 bits (550), Expect = 1e-67
Identities = 71/341 (20%), Positives = 141/341 (41%), Gaps = 56/341 (16%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
+ + ++ L + +N+ SP SI A+ + +T+ ++ + L +
Sbjct: 25 DLSVNMYNRLRATGEDENILFSPLSIALAMGMMELGAQGSTQKEIRHSMGYDS-LKNGEE 83
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKEC----MTAIFPSEIQSMDFGN 116
+ K + + +S N +FV + V E M F + + +DF
Sbjct: 84 FSFLK--EFSNMVT-AKESQYVMKIANSLFVQNGFHVNEEFLQMMKKYFNAAVNHVDFSQ 140
Query: 117 EVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WLP-----STQESI 162
V A IN WV T N +KDL++ ++ T L L W +T+
Sbjct: 141 NVAVANYINKWVENNTNNLVKDLVSPRDFDAATYLALINAVYFKGNWKSQFRPENTRTFS 200
Query: 163 ------IIITV------------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQ 198
+ + + +LE+PY+G +SM +L +
Sbjct: 201 FTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLVLSR--QE 258
Query: 199 DGVGDILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLF 256
+ + + + E + ++K VE+ +P+F++ QE++L L LG+ ++F
Sbjct: 259 VPLATLEPLV-----KAQLVEEWANSVKKQKVEVYLPRFTVEQEIDLKDVLKALGITEIF 313
Query: 257 SPGADLSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAV 296
A+L+ L+D+ I A+HK+ L+++E+G+ AAA + +
Sbjct: 314 IKDANLTGLSDNKEIFLSKAIHKSFLEVNEEGSEAAAVSGM 354
>1mtp_A Serine proteinase inhibitor (serpin), chain A; structural genomics,
protease inhibitor; 1.50A {Thermobifida fusca} SCOP:
e.1.1.1
Length = 323
Score = 212 bits (541), Expect = 8e-67
Identities = 74/330 (22%), Positives = 122/330 (36%), Gaps = 57/330 (17%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
EF L L A V SP+S+ AL + T L +L
Sbjct: 12 EFALHLHRRLAEAVPDGEVIWSPYSVACALGVLAAGARATTRTELTTLLGTDPA------ 65
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFGN 116
L+ L S ++V+ +PV+ M S++++ DF
Sbjct: 66 -------PLLAALDRAVTDSPDLASRTVLWVSADVPVRSSFRATMHDRPDSDVRTADFRT 118
Query: 117 EVEAARA-INSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL-----PSTQES 161
E RA +N+ +A T+ I++L+ G V +L W T+E
Sbjct: 119 NPEGVRATVNADIADATRGMIRELLPQGAVTPDLRAILTNALWAKARWTTPFEAHLTREG 178
Query: 162 IIII---TV------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGDILA 206
++ ++ + +++ LLPP + A
Sbjct: 179 TFRTPRGPKRVPFMHRTKTMPYATARGWRMVTLHA-HDELAVDVLLPPG------TNAAA 231
Query: 207 ALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLT 266
S + VE+A+P+F LTQ L+ L++ GV+ LF+ ADLS ++
Sbjct: 232 VPTAP--LLTALHRRSASTS-VELALPRFELTQPHQLVEVLAEAGVRTLFTASADLSGIS 288
Query: 267 DSHIAFGDAVHKARLDLDEQGTTAAAATAV 296
+ +H+ARL +DE+G AAATA
Sbjct: 289 TVPLYVDTVIHQARLRVDERGAEGAAATAA 318
>2xn6_A Thyroxine-binding globulin; transport, cleaved protein; HET: F6Y
T44; 1.29A {Homo sapiens} PDB: 2xn7_A* 2xn5_A* 2riv_A
2xn3_A* 2riw_A*
Length = 350
Score = 210 bits (537), Expect = 6e-66
Identities = 84/344 (24%), Positives = 144/344 (41%), Gaps = 53/344 (15%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
+F F+L KN+F SP SI AL+ F + +T+ + + L +
Sbjct: 17 DFAFNLYRRFTVETPDKNIFFSPVSISAALVMLSFGACCSTQTEIVETLGFNLTDTPMVE 76
Query: 61 MNVYKMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFGN 116
+ + + LI L L N +F+ + + ++ +E+ S DF N
Sbjct: 77 IQ-HGFQHLICSLN-FPKKELELQIGNALFIGKHLKPLAKFLNDVKTLYETEVFSTDFSN 134
Query: 117 EVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WLP-----STQESI 162
A + INS V +TK + LI + T +VL W T++S
Sbjct: 135 ISAAKQEINSHVEMQTKGKVVGLIQ--DLKPNTIMVLVNYIHFKAQWANPFDPSKTEDSS 192
Query: 163 I-------IITV------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203
+ V + ELN +L++ Y +++F L + +
Sbjct: 193 SFLIDKTTTVQVPMMHQMDQYYHLVDMELNCTVLQMDYSKNALALFVLPK----EGQMES 248
Query: 204 ILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGAD 261
+ AA+ S K + ++ L+ V++ +PKFS++ +L TL +G++ +S AD
Sbjct: 249 VEAAM-----SSKTLKKWNRLLQKGWVDLFVPKFSISATYDLGATLLKMGIQHAYSENAD 303
Query: 262 LSRLT-DSHIAFGDAVHKARLDLDEQGTTAAAATAVFAFRSSRP 304
S LT D+ + +A HKA L + E+GT AA A + A S P
Sbjct: 304 FSGLTEDNGLKLSNAAHKAVLHIGEKGTEAAGAMFLEAIPRSIP 347
>1as4_A Antichymotrypsin, ACT; serpin, serine protease inhibitor; 2.10A
{Homo sapiens} SCOP: e.1.1.1 PDB: 2ach_A* 4caa_A 3caa_A
Length = 341
Score = 208 bits (533), Expect = 2e-65
Identities = 92/335 (27%), Positives = 155/335 (46%), Gaps = 50/335 (14%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
+F F L L KNV SP SI AL ++ T + + L+ NL +
Sbjct: 13 DFAFSLYKQLVLKAPDKNVIFSPLSISTALAFLSLGAHNTTLTEILKGLKF--NLTETSE 70
Query: 61 MNVYK-MEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFG 115
+++ + L++ L + L + N +FV +++ + + ++ SE + DF
Sbjct: 71 AEIHQSFQHLLRTLN-QSSDELQLSMGNAMFVKEQLSLLDRFTEDAKRLYGSEAFATDFQ 129
Query: 116 NEVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WLP-----STQES 161
+ A + IN +V T+ I DLI ++S+T +VL W T +S
Sbjct: 130 DSAAAKKLINDYVKNGTRGKITDLIK--DLDSQTMMVLVNYIFFKAKWEMPFDPQDTHQS 187
Query: 162 I------IIITV-------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVG 202
+ V EL+ ++E+ Y G N S F+LP QD +
Sbjct: 188 RFYLSKKKWVMVPMMSLHHLTIPYFRDEELSCTVVELKYTG-NASALFILPD---QDKME 243
Query: 203 DILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADL 262
++ A L P + KR+ + + + E+ +PKFS++++ NL L LG+++ F+ ADL
Sbjct: 244 EVEAML--LPETLKRWRDSLEFREIGELYLPKFSISRDYNLNDILLQLGIEEAFTSKADL 301
Query: 263 SRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAV 296
S +T + +A VHKA LD+ E+GT A+ ATAV
Sbjct: 302 SGITGARNLAVSQVVHKAVLDVFEEGTEASRATAV 336
>3ndd_A Alpha-1-antitrypsin; serpin, hydrolase inhibitor; 1.50A {Homo
sapiens} PDB: 3ndf_A 7api_A* 8api_A* 9api_A* 1d5s_A
1ezx_A 3t1p_A 2d26_A 1qmb_A
Length = 343
Score = 206 bits (527), Expect = 2e-64
Identities = 82/336 (24%), Positives = 148/336 (44%), Gaps = 54/336 (16%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
EF F L L + + N+F SP SI A + +T + + L NL ++
Sbjct: 17 EFAFSLYRQLAHQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNF--NLTEIPE 74
Query: 61 MNVYKM-EKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFG 115
+++ ++L++ L DS L T+ N +F+++ + + + + ++ SE +++FG
Sbjct: 75 AQIHEGFQELLRTLN-QPDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFG 133
Query: 116 NEVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WLP-----STQES 161
+ EA + IN +V + T+ I DL+ +++ T L W T+E
Sbjct: 134 DTEEAKKQINDYVEKGTQGKIVDLVK--ELDRDTVFALVNYIFFKGKWERPFEVKDTEEE 191
Query: 162 I------IIITV------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203
+ V + +L++ +L + Y G N + F LP + +
Sbjct: 192 DFHVDQVTTVKVPMMKRLGMFNIQHAKKLSSWVLLMKYLG-NATAIFFLP---DEGKLQH 247
Query: 204 ILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGAD 261
+ L + T+ +N + +PK S+T +L L LG+ +FS GAD
Sbjct: 248 LENEL-----THDIITKFLENEDRRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGAD 302
Query: 262 LSRLT-DSHIAFGDAVHKARLDLDEQGTTAAAATAV 296
LS +T ++ + AVHKA L +DE+GT AA
Sbjct: 303 LSGVTEEAPLKLSKAVHKAVLTIDEKGTEAAPDDDD 338
>3dy0_A N-terminus plasma serine protease inhibitor; serpin, blood
clotting, hydrolase inhibitor; HET: IDS SGN; 1.55A {Homo
sapiens} PDB: 1lq8_A* 2hi9_A*
Length = 336
Score = 205 bits (525), Expect = 3e-64
Identities = 86/336 (25%), Positives = 153/336 (45%), Gaps = 54/336 (16%)
Query: 1 EFTFDLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDT 60
+FTFDL L +A +N+F SP SI +L + +T+ + + L L NL K
Sbjct: 11 DFTFDLYRALASAAPSQNIFFSPVSISMSLAMLSLGAGSSTKMQILEGLGL--NLQKSSE 68
Query: 61 MNVYKM-EKLIQGLRANADSGLTFTSTNKIFVNDKIPVKE----CMTAIFPSEIQSMDFG 115
+++ ++L+Q L G + N +F + + +++ M ++ ++ +F
Sbjct: 69 KELHRGFQQLLQELN-QPRDGFQLSLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFR 127
Query: 116 NEVEAARAINSWVAQETKNNIKDLIATGQVNSRTNLVL---------WL-----PSTQES 161
+ A + IN +VA++TK I DL+ ++S +++ W TQE
Sbjct: 128 DSAGAMKQINDYVAKQTKGKIVDLLK--NLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQ 185
Query: 162 I------IIITV------------LSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGD 203
++ V L L+ ++ VPY+G N + F+LP + +
Sbjct: 186 DFYVTSETVVRVPMMSREDQYHYLLDRNLSCRVVGVPYQG-NATALFILPS---EGKMQQ 241
Query: 204 ILAALKKDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGAD 261
+ L S K + + K +E+ +PKFS+ L L LG+ ++F+ AD
Sbjct: 242 VENGL-----SEKTLRKWLKMFKKRQLELYLPKFSIEGSYQLEKVLPSLGISNVFTSHAD 296
Query: 262 LSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAV 296
LS +++ I + VHKA +++DE GT AAAAT
Sbjct: 297 LSGISNHSNIQVSEMVHKAVVEVDESGTRAAAATGT 332
>1f0c_A ICE inhibitor; apoptosis, caspase inhibitor, protease inhibitor,
serpin, viral protein; 2.26A {Cowpox virus} SCOP:
e.1.1.1 PDB: 1c8o_A
Length = 305
Score = 199 bits (509), Expect = 3e-62
Identities = 76/335 (22%), Positives = 131/335 (39%), Gaps = 68/335 (20%)
Query: 5 DLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVY 64
D+ + ++ KG+NVF+SP SI L Y+ +N +T L + + +
Sbjct: 2 DIFREIASSMKGENVFISPPSISSVLTILYYGANGSTAEQLSKYVEKEAD---------- 51
Query: 65 KMEKLIQGLRANADSGLTFTSTNKIFVNDKIPVKECMTAIFPSEIQSMDFGNEVEAARAI 124
++F S NK++ K+ Q++DF + AI
Sbjct: 52 -----------KNKDDISFKSMNKVYGRYSAVFKDSFLRKIGDNFQTVDFTDC-RTVDAI 99
Query: 125 NSWVAQETKNNIKDLIATGQVNSRTNLVL---------WLP-----STQES--------- 161
N V T+ I L+ ++ T L+ WL T +
Sbjct: 100 NKCVDIFTEGKINPLL-DEPLSPDTCLLAISAVYFKAKWLMPFEKEFTSDYPFYVSPTEM 158
Query: 162 ------------IIIITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGDILAALK 209
+V S N I+E+PY G + SM +LP + DG+ I L
Sbjct: 159 VDVSMMSMYGEAFNHASVKESFGNFSIIELPYVG-DTSMVVILP--DNIDGLESIEQNL- 214
Query: 210 KDPTSFKRFTEDSQNLKP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLTD 267
+ F + ++ +++ IPKF +T NL+ L LG+ ++F D S + +
Sbjct: 215 ----TDTNFKKWCDSMDAMFIDVHIPKFKVTGSYNLVDALVKLGLTEVFGSTGDYSNMCN 270
Query: 268 SHIAFGDAVHKARLDLDEQGTTAAAATAVFAFRSS 302
S ++ +HK +D++E+ T AAAAT +
Sbjct: 271 SDVSVDAMIHKTYIDVNEEYTEAAAATCALVADCA 305
>1m93_B Serine proteinase inhibitor 2; serpin, CRMA, apoptosis, ICE
inhibitor, viral protein; 1.65A {Cowpox virus} SCOP:
e.1.1.1
Length = 245
Score = 168 bits (429), Expect = 5e-51
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 47/253 (18%)
Query: 81 LTFTSTNKIFVNDKIPVKECMTAIFPSEIQSMDFGNEVEAARAINSWVAQETKNNIKDLI 140
++F S NK++ K+ Q++DF + AIN V T+ I L+
Sbjct: 2 ISFKSMNKVYGRYSAVFKDSFLRKIGDNFQTVDFTDS-RTVDAINKSVDIFTEGKINPLL 60
Query: 141 ATGQVNSRTNLVL---------WL----PS----------------------TQESIIII 165
++ T+L+ WL E+
Sbjct: 61 -DEPLSPDTSLLAISAVYFKAKWLMPFEKEFTSDYPFYVSPTEMVDVSMMSMYGEAFNHA 119
Query: 166 TVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGDILAALKKDPTSFKRFTEDSQNL 225
+V S N I+E+PY G + SM +LP + DG+ I L + F + S ++
Sbjct: 120 SVKESFGNFSIIELPYVG-DTSMVVILP--DNIDGLESIEQNL-----TDTNFKKWSDSM 171
Query: 226 KP--VEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLTDSHIAFGDAVHKARLDL 283
+++ IPKF +T NL+ L LG+ ++F D S +++S ++ +HK +D+
Sbjct: 172 DAMFIDVHIPKFKVTGSYNLVDALVKLGLTEVFGSTGDYSNMSNSDVSVDAMIHKTYIDV 231
Query: 284 DEQGTTAAAATAV 296
+E+ T AAAAT+
Sbjct: 232 NEEYTEAAAATSA 244
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 59.7 bits (144), Expect = 6e-10
Identities = 73/417 (17%), Positives = 123/417 (29%), Gaps = 166/417 (39%)
Query: 4 FDLLTVLNNANK--GKNVFVS-PFS-----IYQALLTAYFISNKNTEANLKQVLRLPENL 55
++L L N + K+ +S P S + Q L Y ++ K P L
Sbjct: 213 LNILEWLENPSNTPDKDYLLSIPISCPLIGVIQ--LAHYVVTAKLLGFT-------PGEL 263
Query: 56 -DKLDTMNVYKMEKLIQGL-----RANADSGLTFTSTNKIFVNDKIPVKECMTAIF---- 105
L + QGL A DS +F + V++ +T +F
Sbjct: 264 RSYLKGATGH-----SQGLVTAVAIAETDSWESFFVS----------VRKAITVLFFIGV 308
Query: 106 ------------PSEIQ-SMDFGN---------------EVEAA-RAINSWVAQETKNNI 136
PS ++ S++ +V+ NS + +
Sbjct: 309 RCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQ--- 365
Query: 137 KDLIATGQVNSRTNLVLW-LPSTQESIIIITVLSSELNAHILE-----------VPY--K 182
+ VN NLV+ P + L LN + + +P+ +
Sbjct: 366 ---VEISLVNGAKNLVVSGPPQS---------LYG-LNLTLRKAKAPSGLDQSRIPFSER 412
Query: 183 GGNMSMFFLLP---PFAS---QDGVGDILAALKKDPTSFKRFTEDSQNLKPVEIAIPKFS 236
S FL P PF S I L K+ SF +I IP
Sbjct: 413 KLKFSNRFL-PVASPFHSHLLVPASDLINKDLVKNNVSFN----------AKDIQIP--- 458
Query: 237 LTQEMNLIPTLSDLGVKDLFSPGADL----SRLTDSHIAFGDAVHKARLDLDEQGTTAAA 292
V D F G+DL +++ + D + + + + TT
Sbjct: 459 ---------------VYDTFD-GSDLRVLSGSISERIV---DCIIRLPVKWET--TTQFK 497
Query: 293 ATAVFAF---RSSRPLEPVRYEANHPFLYFLVDKEIQ----SILFAGVFNEPPNKEV 342
AT + F +S L L + ++ AG + P+ +
Sbjct: 498 ATHILDFGPGGASG-------------LGVLTHRNKDGTGVRVIVAGTLDINPDDDY 541
Score = 43.1 bits (101), Expect = 1e-04
Identities = 52/332 (15%), Positives = 96/332 (28%), Gaps = 111/332 (33%)
Query: 90 FVNDKI------PVKECMTAIFPSEIQSMDF--GNEVEAARAINSWVAQETKNNIKDLIA 141
+V+ + + + +E ++ + GN+ I++ A+ + N L+
Sbjct: 67 YVSSLVEPSKVGQFDQVLNLCL-TEFEN-CYLEGND------IHALAAKLLQENDTTLVK 118
Query: 142 TGQV-----NSRTNLVLWLPSTQESIIIITVLSSELNAHILEVPYKG-GNMSMFF--LL- 192
T ++ +R S + V NA ++ + + G GN +F L
Sbjct: 119 TKELIKNYITARIMAKRPFDKKSNSALFRAVGEG--NAQLVAI-FGGQGNTDDYFEELRD 175
Query: 193 -----PPFASQ--DGVGDILAALKKDPTSFKRF----------------TEDSQNLKPVE 229
+ L+ L + ++ T D L +
Sbjct: 176 LYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIP 235
Query: 230 IAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRLTDSHIAFGDAVHKARLDLDEQGTT 289
I+ P + Q + + T LG F+PG S L G H QG
Sbjct: 236 ISCPLIGVIQLAHYVVTAKLLG----FTPGELRSYLK------GATGHS-------QGLV 278
Query: 290 AAAATAV----------------FAF-----------RSSRPLEPVRYEANH------PF 316
A A A F +S P + + P
Sbjct: 279 TAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPM 338
Query: 317 LYFLV----DKEIQSILFAGVFNE--PPNKEV 342
L + +++Q + N P K+V
Sbjct: 339 L--SISNLTQEQVQDYVNK--TNSHLPAGKQV 366
Score = 42.0 bits (98), Expect = 3e-04
Identities = 46/264 (17%), Positives = 74/264 (28%), Gaps = 97/264 (36%)
Query: 109 IQS----MDFGNEVEAARAINSW-----VAQETKN-NIKDLIATGQVNSRTNLVLWLPST 158
Q MD +AA+ + W ++T +I D++ N P
Sbjct: 1626 SQEQGMGMDLYKTSKAAQDV--WNRADNHFKDTYGFSILDIV-------INN-----PVN 1671
Query: 159 QESIIIITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGDILAALKKDPTS--FK 216
+T+ + Y +M F I + + TS F+
Sbjct: 1672 ------LTIHFGGEKGKRIRENY----SAMIFETIVDGKLKTE-KIFKEINEHSTSYTFR 1720
Query: 217 ------RFTEDSQNLKP----VEIAIPKFSLTQEMNLIPT------LSDLG-------VK 253
T+ +Q P +E A F + LIP S LG +
Sbjct: 1721 SEKGLLSATQFTQ---PALTLMEKAA--FEDLKSKGLIPADATFAGHS-LGEYAALASLA 1774
Query: 254 DLFSPGADLSRLTDSHIAF--GDAVHKARLDLDEQGTTAAAATAV--------------- 296
D+ S L + F G + A + DE G + A+
Sbjct: 1775 DVMSI-ESLVEVV-----FYRGMTMQVA-VPRDELGRSNYGMIAINPGRVAASFSQEALQ 1827
Query: 297 -----FAFRSSRPLEPVRYEANHP 315
R+ +E V Y N
Sbjct: 1828 YVVERVGKRTGWLVEIVNY--NVE 1849
>1m93_A Serine proteinase inhibitor 2; serpin, CRMA, apoptosis, ICE
inhibitor, viral protein; 1.65A {Cowpox virus} SCOP:
e.1.1.1
Length = 55
Score = 51.9 bits (125), Expect = 2e-09
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 5 DLLTVLNNANKGKNVFVSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDK 57
D+ + ++ KG+NVF+SP SI L Y+ +N +T L + + + +K
Sbjct: 2 DIFREIASSMKGENVFISPPSISSVLTILYYGANGSTAEQLSKYVEKEADKNK 54
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 46.4 bits (109), Expect = 9e-06
Identities = 49/297 (16%), Positives = 92/297 (30%), Gaps = 80/297 (26%)
Query: 21 VSPFSIYQALLTAYFISNKNTEANLKQVLRLPENLDKLDTMNVYKMEKLIQGLRANADSG 80
+P + +++ T N K V N DKL T+ +E + L
Sbjct: 325 TNPRRL--SIIAESIRDGLATWDNWKHV-----NCDKLTTI----IESSLNVLEPAEYRK 373
Query: 81 LTFTSTNKIFVND-KIPVKECMTAIF---PSEIQSMDFGNEVEAARAINSWVAQETKNNI 136
+ F + +F IP + ++ + M N++ + +E+ +I
Sbjct: 374 M-FDRLS-VFPPSAHIPTI--LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ-PKESTISI 428
Query: 137 KDLI--ATGQVNSRTNLVLWLPSTQESII--------------IITVLSSELNAHI---L 177
+ ++ + L SI+ I L +HI L
Sbjct: 429 PSIYLELKVKLENEYAL-------HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL 481
Query: 178 EVPYKGGNMSMF--------FL-------LPPFASQDGVGDILAALKKDPTSFKRF-TED 221
+ M++F FL + + + + L LK +K + ++
Sbjct: 482 KNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF----YKPYICDN 537
Query: 222 SQNLKPVEIAIPKFSLTQEMNLIPTLSDLGVKDLFSPGADLSRL---TDSHIAFGDA 275
+ + AI F E NLI S DL R+ + F +A
Sbjct: 538 DPKYERLVNAILDFLPKIEENLI-----------CSKYTDLLRIALMAEDEAIFEEA 583
Score = 41.0 bits (95), Expect = 4e-04
Identities = 36/273 (13%), Positives = 74/273 (27%), Gaps = 79/273 (28%)
Query: 92 NDKIPVKECMTAIFPSEIQSMDFGNEVEAARAINSWVAQETKNNIKDLIATGQVNSRTNL 151
D + V E + + + D + + ++I +K I +I + S T
Sbjct: 19 KDILSVFE------DAFVDNFDCKDVQDMPKSI------LSKEEIDHIIMSKDAVSGTLR 66
Query: 152 VLW-LPSTQESIIIITVLSSELNAHILEVPYKGGNMSMFFLLPPFASQDGVGDILAALKK 210
+ W L S QE ++ V +L + YK FL+ P ++ +
Sbjct: 67 LFWTLLSKQEEMVQKFVEE------VLRINYK-------FLMSPIKTEQ----------R 103
Query: 211 DPT-SFKRFTE-------DSQNLKPVEIAIPK---------FSLTQEMNLI--------- 244
P+ + + E D+Q ++ + L N++
Sbjct: 104 QPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK 163
Query: 245 -----PTLSDLGVKDLFSPGADLSRLTDSH-IAFGDAVHKARLDLDEQGTTAAAATAVFA 298
V+ + + + L+ +
Sbjct: 164 TWVALDVCLSYKVQCKMDFKI--------FWLNLKN-CNSPETVLEMLQKLLYQIDPNWT 214
Query: 299 FRSSRPLE-PVRYE-ANHPFLYFLVDKEIQSIL 329
RS +R L K ++ L
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247
>1hle_B Horse leukocyte elastase inhibitor; hydrolase inhibitor(serine
proteinase); 1.95A {Equus caballus} SCOP: e.1.1.1
Length = 31
Score = 37.6 bits (88), Expect = 1e-04
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 309 RYEANHPFLYFLVDKEIQSILFAGVFNEP 337
+ A+HPF++F+ +ILF G F+ P
Sbjct: 3 NFNADHPFIFFIRHNPSANILFLGRFSSP 31
>2h4p_B MENT, heterochromatin-associated protein MENT; serine protease
inhibitor, serpin, hydrolase inhibitor; 1.70A {Gallus
gallus} PDB: 2h4q_B
Length = 34
Score = 37.7 bits (88), Expect = 1e-04
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 309 RYEANHPFLYFLVDKEIQSILFAGVFNEP 337
+++ +HPF +F+ + ++ILF G F P
Sbjct: 4 KFKVDHPFHFFIRHNKSKTILFFGRFCCP 32
>3f02_C Neuroserpin; cleaved form, fenib, human, disease MUT glycoprotein,
protease inhibitor, secreted, serine protease inhibitor,
hydrolase inhibitor; 1.80A {Homo sapiens} PDB: 1jjo_E
Length = 48
Score = 36.7 bits (85), Expect = 5e-04
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 309 RYEANHPFLYFLVDKEIQSILFAGVFNEPPNKEV 342
+ +HPF + + ++ +ILF G P
Sbjct: 7 QVIVDHPFFFLIRNRRTGTILFMGRVMHPETMNT 40
>3ndd_B Alpha-1-antitrypsin; serpin, hydrolase inhibitor; 1.50A {Homo
sapiens} PDB: 1ezx_B 3ndf_B 7api_B* 8api_B* 9api_B*
2d26_B
Length = 36
Score = 32.7 bits (75), Expect = 0.009
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 307 PVRYEANHPFLYFLVDKEIQSILFAGVFNEPPNK 340
P + N PF++ ++++ +S LF G P K
Sbjct: 3 PPEVKFNKPFVFLMIEQNTKSPLFMGKVVNPTQK 36
>1m93_C Serine proteinase inhibitor 2; serpin, CRMA, apoptosis, ICE
inhibitor, viral protein; 1.65A {Cowpox virus} SCOP:
e.1.1.1 PDB: 1c8o_B 1f0c_B
Length = 41
Score = 31.5 bits (71), Expect = 0.026
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 307 PVRYEANHPFLYFLVDKEIQSILFAGVFNEP 337
+ A+HPF+Y + + ILF G ++ P
Sbjct: 9 TNEFSADHPFIYVIRHVD-GKILFVGRYSSP 38
>2riv_B Thyroxine-binding globulin; TBG, serpin, cleaved, mutation,
glycoprotein, secreted, signaling protein; 1.50A {Homo
sapiens} PDB: 2riw_B* 2xn3_B*
Length = 40
Score = 31.5 bits (71), Expect = 0.031
Identities = 8/37 (21%), Positives = 16/37 (43%)
Query: 301 SSRPLEPVRYEANHPFLYFLVDKEIQSILFAGVFNEP 337
S + + F+ ++++ +SILF G P
Sbjct: 1 SENTFLHPIIQIDRSFMLLILERSTRSILFLGKVVNP 37
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 33.0 bits (74), Expect = 0.065
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Query: 207 ALKKDPTSFKRFTEDSQNLKPVEIAI 232
ALKK S K + +DS P +AI
Sbjct: 21 ALKKLQASLKLYADDS---APA-LAI 42
>2xn6_B Thyroxine-binding globulin; transport, cleaved protein; HET: F6Y
T44; 1.29A {Homo sapiens} PDB: 2xn5_B* 2xn7_B*
Length = 35
Score = 27.9 bits (62), Expect = 0.48
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 313 NHPFLYFLVDKEIQSILFAGVFNEP 337
+ F+ ++++ +SILF G P
Sbjct: 8 DRSFMLLILERSTRSILFLGKVVNP 32
>1as4_B Antichymotrypsin, ACT; serpin, serine protease inhibitor; 2.10A
{Homo sapiens} SCOP: e.1.1.1 PDB: 2ach_B* 3caa_B 4caa_B
Length = 37
Score = 27.2 bits (60), Expect = 0.78
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 313 NHPFLYFLVDKEIQSILFAGVFNEP 337
N PFL +V + Q+I F P
Sbjct: 10 NRPFLMIIVPTDTQNIFFMSKVTNP 34
>1s03_H 30S ribosomal protein S8; protein-RNA complex, SPC operon,
transcription-RN; 2.70A {Escherichia coli} SCOP:
d.140.1.1 PDB: 1p6g_H 1p87_H 2avy_H 2aw7_H 2i2p_H
2i2u_H 2qal_H* 2qan_H* 2qb9_H* 2qbb_H* 2qbd_H 2qbf_H
2qbh_H* 2qbj_H* 2qou_H* 2qow_H* 2qoy_H* 2qp0_H* 2vho_H
2vhp_H ...
Length = 129
Score = 28.6 bits (65), Expect = 1.3
Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 6/53 (11%)
Query: 5 DLLTVLNNANKGKNVFVS-PFS-----IYQALLTAYFISNKNTEANLKQVLRL 51
D+LT + N V+ P S I L FI + E + K L L
Sbjct: 8 DMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELEL 60
>3naf_A Calcium-activated potassium channel subunit alpha; ION channel,
gating ring, rossman fold, transport, ION trans; 3.10A
{Homo sapiens}
Length = 798
Score = 28.1 bits (61), Expect = 5.4
Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 13/130 (10%)
Query: 73 LRAN---ADSGLTFTSTNKIFVNDKIPVKECMTAIFPSEIQSMDFGNEVEAARAINSWVA 129
N D + ++ + + KEC+ A I+SM F +I A
Sbjct: 475 RAVNINLCDMCVILSANQNNIDDTSLQDKECILAS--LNIKSMQF------DDSIGVLQA 526
Query: 130 QETKNNIKDLIATGQVNSRTNLVLWLPSTQ--ESIIIITVLSSELNAHILEVPYKGGNMS 187
+ + NS + +L PS +I IIT L ++ N L+ +
Sbjct: 527 NSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELVNDTNVQFLDQDDDDDPDT 586
Query: 188 MFFLLPPFAS 197
+L PFA
Sbjct: 587 ELYLTQPFAC 596
>2vqe_H 30S ribosomal protein S8, 30S ribosomal protein S6; tRNA-binding,
rRNA-binding, metal-binding, zinc-finger, translation;
HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP:
d.140.1.1 PDB: 1eg0_E* 1fka_H 1gix_K* 1hnw_H* 1hnx_H*
1hnz_H* 1hr0_H 1ibk_H* 1ibl_H* 1ibm_H 1j5e_H 1jgo_K*
1jgp_K* 1jgq_K* 1ml5_K* 1n32_H* 1n33_H* 1n34_H 1n36_H
1pns_H ...
Length = 138
Score = 26.7 bits (60), Expect = 6.4
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Query: 5 DLLTVLNNANKGKNVFVS-PFS-----IYQALLTAYFISN-KNTEANLKQVLRL 51
D+LT + NA + P S I + L FI + + + K LR+
Sbjct: 8 DMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRV 61
>1sei_A Ribosomal protein S8; prokaryotic, rRNA-binding; 1.90A
{Geobacillus stearothermophilus} SCOP: d.140.1.1
Length = 130
Score = 26.3 bits (59), Expect = 7.8
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 5 DLLTVLNNANKGKNVFVS-PFS-----IYQALLTAYFISN-KNTEANLKQVLRL 51
D+LT + NAN ++ + P S I + L FI + + E N + +LR+
Sbjct: 8 DMLTAIRNANMVRHEKLEVPASKIKREIAEILKREGFIRDYEYIEDNKQGILRI 61
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured
bacterium} PDB: 3dnm_A
Length = 322
Score = 27.3 bits (61), Expect = 8.1
Identities = 6/21 (28%), Positives = 9/21 (42%)
Query: 255 LFSPGADLSRLTDSHIAFGDA 275
+ SP DL+ S+ D
Sbjct: 183 MLSPFVDLTLSRWSNSNLADR 203
>3bbn_H Ribosomal protein S8; small ribosomal subunit, spinach
chloroplast ribosome, ribonucleoprotein particle,
macromolecular complex; 9.40A {Spinacea oleracea}
Length = 134
Score = 26.3 bits (59), Expect = 8.1
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 7/54 (12%)
Query: 5 DLLTVLNNANKGKNVFVS-PFS-----IYQALLTAYFISN-KNTEANLKQVLRL 51
D++T + NA+ + V + I + LL FI N + + K L L
Sbjct: 8 DIITCIRNADMNRKGTVRIVSTNITENIVKILLREGFIENARKHQERNKYFLVL 61
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.133 0.376
Gapped
Lambda K H
0.267 0.0755 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,933,041
Number of extensions: 286668
Number of successful extensions: 914
Number of sequences better than 10.0: 1
Number of HSP's gapped: 681
Number of HSP's successfully gapped: 109
Length of query: 342
Length of database: 6,701,793
Length adjustment: 94
Effective length of query: 248
Effective length of database: 4,077,219
Effective search space: 1011150312
Effective search space used: 1011150312
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.1 bits)