Query psy7904
Match_columns 181
No_of_seqs 265 out of 933
Neff 5.6
Searched_HMMs 46136
Date Fri Aug 16 21:49:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7904.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7904hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1472|consensus 100.0 4.9E-31 1.1E-35 249.6 2.3 165 6-170 424-598 (720)
2 PF00583 Acetyltransf_1: Acety 99.6 2E-14 4.4E-19 99.1 9.8 76 6-81 1-83 (83)
3 PF13508 Acetyltransf_7: Acety 99.6 2.5E-14 5.5E-19 99.7 9.9 75 3-82 5-79 (79)
4 PRK07757 acetyltransferase; Pr 99.6 3.9E-14 8.4E-19 108.9 11.0 99 4-114 44-144 (152)
5 PRK10146 aminoalkylphosphonic 99.5 7.7E-14 1.7E-18 105.5 8.9 80 4-83 50-136 (144)
6 COG1246 ArgA N-acetylglutamate 99.5 1.7E-13 3.7E-18 109.7 8.2 92 5-97 44-137 (153)
7 PF13673 Acetyltransf_10: Acet 99.5 4.2E-13 9.2E-18 97.9 9.4 72 3-80 46-117 (117)
8 PRK10314 putative acyltransfer 99.5 3.6E-13 7.8E-18 106.3 9.2 81 4-84 51-133 (153)
9 PTZ00330 acetyltransferase; Pr 99.5 6.8E-13 1.5E-17 100.6 10.1 76 8-83 59-139 (147)
10 PRK10140 putative acetyltransf 99.4 1.1E-12 2.3E-17 100.6 11.2 99 4-105 54-159 (162)
11 PRK09491 rimI ribosomal-protei 99.4 1.5E-12 3.3E-17 99.5 11.8 99 5-107 44-145 (146)
12 TIGR01890 N-Ac-Glu-synth amino 99.4 1E-12 2.2E-17 119.1 11.3 97 4-101 325-423 (429)
13 TIGR03827 GNAT_ablB putative b 99.4 1.6E-12 3.4E-17 110.6 11.3 99 4-105 161-263 (266)
14 TIGR01575 rimI ribosomal-prote 99.4 2.4E-12 5.3E-17 94.5 10.2 81 5-87 35-118 (131)
15 TIGR02382 wecD_rffC TDP-D-fuco 99.4 2E-12 4.2E-17 104.4 9.4 76 8-84 106-184 (191)
16 PLN02706 glucosamine 6-phospha 99.4 4.9E-12 1.1E-16 96.9 10.5 75 9-83 63-142 (150)
17 PRK07922 N-acetylglutamate syn 99.4 5.3E-12 1.1E-16 100.9 10.4 77 4-83 48-125 (169)
18 PRK03624 putative acetyltransf 99.3 6.4E-12 1.4E-16 93.0 9.1 79 4-84 48-129 (140)
19 PF13527 Acetyltransf_9: Acety 99.3 8E-12 1.7E-16 92.9 9.5 78 3-82 43-126 (127)
20 COG0456 RimI Acetyltransferase 99.3 3.9E-12 8.4E-17 99.0 7.8 74 11-84 72-153 (177)
21 PRK09831 putative acyltransfer 99.3 5.3E-12 1.1E-16 97.3 8.4 73 4-87 56-128 (147)
22 PF13420 Acetyltransf_4: Acety 99.3 1.2E-11 2.6E-16 94.7 10.3 86 3-89 52-143 (155)
23 COG1247 Sortase and related ac 99.3 1.8E-11 3.9E-16 99.5 11.6 104 2-109 52-165 (169)
24 PHA00673 acetyltransferase dom 99.3 2.3E-11 5E-16 97.6 11.4 80 4-83 58-144 (154)
25 PLN02825 amino-acid N-acetyltr 99.3 1.2E-11 2.6E-16 115.3 11.0 78 4-82 410-487 (515)
26 cd02169 Citrate_lyase_ligase C 99.3 1.2E-11 2.5E-16 108.3 9.9 75 4-84 8-83 (297)
27 PRK05279 N-acetylglutamate syn 99.3 1.5E-11 3.3E-16 111.6 10.9 80 4-84 337-416 (441)
28 PRK10975 TDP-fucosamine acetyl 99.3 2.3E-11 4.9E-16 98.1 10.4 79 5-84 105-187 (194)
29 TIGR02406 ectoine_EctA L-2,4-d 99.3 2.1E-11 4.6E-16 95.9 9.8 78 9-86 48-129 (157)
30 PRK12308 bifunctional arginino 99.3 1.7E-11 3.6E-16 116.0 10.5 95 4-111 506-600 (614)
31 PRK13688 hypothetical protein; 99.3 4.2E-11 9E-16 95.6 10.2 78 4-86 48-134 (156)
32 KOG3139|consensus 99.3 5E-11 1.1E-15 96.1 10.7 91 3-93 58-154 (165)
33 TIGR00124 cit_ly_ligase [citra 99.2 1.2E-10 2.6E-15 103.3 11.4 77 4-86 34-110 (332)
34 PRK10514 putative acetyltransf 99.2 1.3E-10 2.8E-15 88.2 8.9 72 8-88 57-129 (145)
35 TIGR03448 mycothiol_MshD mycot 99.2 2.3E-10 4.9E-15 96.9 10.1 77 4-83 49-126 (292)
36 PRK10151 ribosomal-protein-L7/ 99.1 9.5E-10 2.1E-14 86.8 12.7 102 3-107 69-175 (179)
37 PHA01807 hypothetical protein 99.1 2.6E-10 5.7E-15 90.9 9.4 76 3-78 55-136 (153)
38 PRK15130 spermidine N1-acetylt 99.1 6E-10 1.3E-14 88.5 10.6 100 3-106 59-164 (186)
39 TIGR03448 mycothiol_MshD mycot 99.1 6.3E-10 1.4E-14 94.2 10.7 80 4-83 201-286 (292)
40 PF13523 Acetyltransf_8: Acety 99.1 1.4E-09 3.1E-14 83.5 11.2 85 2-86 49-142 (152)
41 PRK10562 putative acetyltransf 99.0 1.5E-09 3.3E-14 83.1 9.4 74 4-85 51-125 (145)
42 TIGR03103 trio_acet_GNAT GNAT- 99.0 2.2E-09 4.8E-14 100.7 10.9 75 9-83 133-215 (547)
43 PRK10809 ribosomal-protein-S5- 99.0 5.3E-09 1.1E-13 83.7 11.4 78 9-87 85-168 (194)
44 TIGR03585 PseH pseudaminic aci 99.0 4.4E-09 9.4E-14 80.4 10.3 84 3-88 53-141 (156)
45 TIGR01686 FkbH FkbH-like domai 99.0 1.8E-09 3.8E-14 94.4 8.7 72 9-82 242-318 (320)
46 COG3153 Predicted acetyltransf 99.0 3.6E-09 7.9E-14 86.3 9.6 79 2-83 47-129 (171)
47 PRK01346 hypothetical protein; 99.0 4.9E-09 1.1E-13 93.6 11.1 78 4-83 50-134 (411)
48 PF13302 Acetyltransf_3: Acety 98.9 3.3E-08 7.2E-13 73.8 10.4 71 10-81 67-142 (142)
49 KOG3396|consensus 98.8 1E-08 2.2E-13 81.1 7.4 81 3-83 55-142 (150)
50 PF08445 FR47: FR47-like prote 98.8 2.4E-08 5.2E-13 72.1 8.7 57 27-83 22-80 (86)
51 cd04301 NAT_SF N-Acyltransfera 98.8 5.2E-08 1.1E-12 61.2 8.9 62 4-65 2-64 (65)
52 KOG2488|consensus 98.8 2E-08 4.2E-13 83.2 8.3 85 4-88 95-185 (202)
53 TIGR01211 ELP3 histone acetylt 98.8 3.8E-08 8.2E-13 92.2 10.2 76 9-84 422-515 (522)
54 PF14542 Acetyltransf_CG: GCN5 98.7 1.9E-07 4.2E-12 66.5 9.1 70 5-78 3-72 (78)
55 COG1670 RimL Acetyltransferase 98.6 6E-07 1.3E-11 69.0 10.2 79 10-89 77-162 (187)
56 KOG3216|consensus 98.6 4.9E-07 1.1E-11 72.8 9.6 75 9-83 63-144 (163)
57 KOG3138|consensus 98.6 1.1E-07 2.3E-12 78.7 6.0 79 9-87 63-154 (187)
58 COG2153 ElaA Predicted acyltra 98.6 2.2E-07 4.9E-12 74.2 7.4 79 4-83 52-134 (155)
59 COG3393 Predicted acetyltransf 98.5 5.2E-07 1.1E-11 78.0 8.5 80 5-85 181-262 (268)
60 KOG3397|consensus 98.5 2.9E-07 6.3E-12 75.9 6.5 73 9-82 65-138 (225)
61 KOG3234|consensus 98.3 2.7E-06 5.9E-11 68.9 7.2 80 9-88 50-134 (173)
62 COG3053 CitC Citrate lyase syn 98.2 1.7E-05 3.7E-10 70.0 10.8 86 5-107 40-126 (352)
63 PF13718 GNAT_acetyltr_2: GNAT 98.2 6.4E-06 1.4E-10 68.6 7.4 56 27-82 91-173 (196)
64 COG0454 WecD Histone acetyltra 98.2 2.5E-06 5.5E-11 56.3 4.0 44 32-80 87-130 (156)
65 KOG3235|consensus 98.1 1.5E-05 3.3E-10 64.9 7.7 100 2-106 42-151 (193)
66 PF12746 GNAT_acetyltran: GNAT 98.1 5.3E-05 1.1E-09 65.7 11.3 79 4-84 168-246 (265)
67 COG3981 Predicted acetyltransf 98.0 1.1E-05 2.4E-10 65.9 5.9 80 3-83 70-157 (174)
68 COG1444 Predicted P-loop ATPas 97.7 4E-05 8.7E-10 74.7 5.2 56 27-83 532-589 (758)
69 COG2388 Predicted acetyltransf 97.6 0.00024 5.1E-09 53.3 6.4 58 5-63 19-76 (99)
70 PF12568 DUF3749: Acetyltransf 97.5 0.0018 3.9E-08 50.7 10.5 76 4-83 41-123 (128)
71 COG4552 Eis Predicted acetyltr 97.5 0.00021 4.5E-09 64.5 5.7 79 3-83 41-125 (389)
72 PF08444 Gly_acyl_tr_C: Aralky 97.1 0.0018 3.9E-08 47.8 5.9 69 9-82 7-77 (89)
73 PF00765 Autoind_synth: Autoin 96.9 0.029 6.3E-07 45.9 12.3 80 4-83 48-153 (182)
74 COG1243 ELP3 Histone acetyltra 96.8 0.0014 3E-08 61.1 4.5 49 36-84 460-508 (515)
75 TIGR03694 exosort_acyl putativ 96.8 0.013 2.8E-07 49.9 9.9 59 25-83 110-196 (241)
76 KOG4135|consensus 96.7 0.0043 9.3E-08 50.4 6.1 57 27-83 108-168 (185)
77 KOG4144|consensus 96.5 0.0021 4.6E-08 52.4 3.0 76 9-84 70-160 (190)
78 TIGR03827 GNAT_ablB putative b 96.4 0.016 3.4E-07 49.3 8.0 63 41-109 20-82 (266)
79 COG3818 Predicted acetyltransf 96.2 0.024 5.2E-07 45.2 7.4 60 25-84 83-147 (167)
80 PF13480 Acetyltransf_6: Acety 96.2 0.042 9.1E-07 40.5 8.5 61 4-66 74-134 (142)
81 PRK13834 putative autoinducer 95.9 0.2 4.4E-06 41.7 11.8 93 8-107 61-180 (207)
82 COG5628 Predicted acetyltransf 95.8 0.06 1.3E-06 42.3 7.5 78 3-83 39-121 (143)
83 KOG2535|consensus 95.7 0.013 2.9E-07 53.4 4.3 48 37-84 498-546 (554)
84 PF13880 Acetyltransf_13: ESCO 95.6 0.019 4E-07 40.6 3.8 30 26-55 5-34 (70)
85 PF06852 DUF1248: Protein of u 95.3 0.14 3E-06 42.3 8.6 78 5-83 50-135 (181)
86 cd04264 DUF619-NAGS DUF619 dom 94.9 0.16 3.5E-06 37.9 7.3 68 4-75 11-80 (99)
87 COG5076 Transcription factor i 94.7 0.011 2.3E-07 53.2 0.7 116 10-126 80-203 (371)
88 cd04265 DUF619-NAGS-U DUF619 d 94.6 0.14 3.1E-06 38.2 6.3 67 5-75 13-80 (99)
89 PF01233 NMT: Myristoyl-CoA:pr 93.6 0.28 6.1E-06 39.9 6.7 55 9-63 87-147 (162)
90 PF05301 Mec-17: Touch recepto 92.2 0.16 3.5E-06 39.4 3.4 47 29-78 49-98 (120)
91 KOG2036|consensus 91.4 0.15 3.4E-06 50.1 2.9 31 27-57 615-645 (1011)
92 COG3916 LasI N-acyl-L-homoseri 90.3 2.8 6.1E-05 35.5 9.1 77 7-83 59-161 (209)
93 COG3882 FkbH Predicted enzyme 88.9 0.33 7.2E-06 46.0 2.8 73 9-83 471-548 (574)
94 PF01853 MOZ_SAS: MOZ/SAS fami 88.1 1.7 3.7E-05 36.2 6.2 48 11-59 66-113 (188)
95 PF04377 ATE_C: Arginine-tRNA- 85.3 5.5 0.00012 31.0 7.4 56 8-65 46-101 (128)
96 KOG2696|consensus 82.9 1.4 3E-05 40.4 3.6 55 12-66 200-258 (403)
97 PLN03238 probable histone acet 81.0 1.7 3.7E-05 38.5 3.3 48 11-59 141-188 (290)
98 PRK01305 arginyl-tRNA-protein 77.8 21 0.00046 30.6 9.0 56 8-65 151-206 (240)
99 TIGR03019 pepcterm_femAB FemAB 77.3 13 0.00028 32.4 7.7 78 4-83 198-279 (330)
100 PLN03239 histone acetyltransfe 77.0 2.1 4.6E-05 38.8 2.8 48 11-59 199-246 (351)
101 PF04768 DUF619: Protein of un 75.4 7.1 0.00015 31.8 5.2 68 6-76 65-135 (170)
102 PF13444 Acetyltransf_5: Acety 74.0 5.7 0.00012 28.8 4.0 24 25-48 77-100 (101)
103 PTZ00064 histone acetyltransfe 72.3 3.1 6.8E-05 39.6 2.7 48 11-59 370-417 (552)
104 PLN00104 MYST -like histone ac 72.1 4.7 0.0001 37.8 3.8 48 11-59 292-339 (450)
105 COG3375 Uncharacterized conser 70.4 23 0.0005 30.8 7.3 68 4-71 49-120 (266)
106 COG2401 ABC-type ATPase fused 67.5 2.3 5E-05 40.2 0.8 56 27-82 242-305 (593)
107 KOG2779|consensus 66.6 8.3 0.00018 35.4 4.1 53 9-61 144-202 (421)
108 KOG2747|consensus 66.2 7.5 0.00016 35.9 3.8 30 29-58 263-292 (396)
109 cd04266 DUF619-NAGS-FABP DUF61 62.5 39 0.00085 25.6 6.5 49 24-75 37-87 (108)
110 PRK04531 acetylglutamate kinas 58.1 40 0.00088 30.9 7.0 64 6-75 292-356 (398)
111 KOG4601|consensus 56.3 9.7 0.00021 33.1 2.5 27 27-53 109-135 (264)
112 PHA02769 hypothetical protein; 55.3 16 0.00034 28.7 3.3 41 44-84 94-138 (154)
113 PF09924 DUF2156: Uncharacteri 54.4 1.2E+02 0.0025 26.0 9.0 59 4-64 183-243 (299)
114 cd03173 DUF619-like DUF619 dom 53.8 84 0.0018 23.4 7.0 65 6-75 14-79 (98)
115 PF11124 Pho86: Inorganic phos 52.1 82 0.0018 28.2 7.7 79 5-83 173-269 (304)
116 PF12261 T_hemolysin: Thermost 50.7 33 0.00071 28.2 4.7 53 26-82 87-139 (179)
117 PF04339 DUF482: Protein of un 50.1 58 0.0013 29.7 6.7 54 32-85 106-160 (370)
118 COG5027 SAS2 Histone acetyltra 44.1 9.2 0.0002 35.0 0.6 41 11-52 248-288 (395)
119 COG2898 Uncharacterized conser 41.0 1.5E+02 0.0033 28.6 8.2 62 2-64 393-455 (538)
120 cd07235 MRD Mitomycin C resist 40.8 24 0.00053 25.1 2.3 14 70-83 13-26 (122)
121 cd07043 STAS_anti-anti-sigma_f 39.3 85 0.0018 21.3 4.9 43 44-86 55-97 (99)
122 KOG3014|consensus 38.9 31 0.00067 30.1 2.9 31 26-56 183-213 (257)
123 cd09012 Glo_EDI_BRP_like_24 Th 35.6 55 0.0012 23.4 3.5 14 70-83 13-26 (124)
124 COG3146 Uncharacterized protei 34.9 1.2E+02 0.0026 28.0 6.1 49 34-82 123-172 (387)
125 COG5482 Uncharacterized conser 34.3 72 0.0016 27.0 4.3 57 70-127 9-65 (229)
126 PRK14852 hypothetical protein; 32.7 1.3E+02 0.0029 31.1 6.7 59 26-84 121-180 (989)
127 COG2935 Putative arginyl-tRNA: 30.3 2.4E+02 0.0051 24.7 6.9 55 9-65 159-213 (253)
128 cd08353 Glo_EDI_BRP_like_7 Thi 29.1 49 0.0011 24.2 2.4 25 59-83 3-29 (142)
129 cd08344 MhqB_like_N N-terminal 28.9 55 0.0012 23.1 2.5 25 59-83 2-28 (112)
130 TIGR00377 ant_ant_sig anti-ant 28.0 1.1E+02 0.0024 21.5 4.0 42 45-86 61-102 (108)
131 PF02388 FemAB: FemAB family; 27.4 1.7E+02 0.0037 26.6 6.0 133 4-145 38-191 (406)
132 PRK02983 lysS lysyl-tRNA synth 26.8 3.8E+02 0.0083 28.1 8.9 54 9-64 429-482 (1094)
133 cd08346 PcpA_N_like N-terminal 26.7 64 0.0014 22.5 2.5 27 59-85 1-30 (126)
134 PF09514 SSXRD: SSXRD motif; 26.6 26 0.00055 21.5 0.3 17 164-180 15-31 (34)
135 PF02474 NodA: Nodulation prot 25.2 1.3E+02 0.0029 25.1 4.4 38 26-64 85-122 (196)
136 PF12953 DUF3842: Domain of un 24.0 1E+02 0.0022 24.3 3.3 44 37-82 6-50 (131)
137 PF02334 RTP: Replication term 23.9 17 0.00037 28.1 -1.0 22 38-59 28-49 (122)
138 cd07267 THT_Oxygenase_N N-term 22.4 1.1E+02 0.0023 21.6 3.1 24 60-83 4-29 (113)
139 cd07240 ED_TypeI_classII_N N-t 22.0 1.3E+02 0.0027 20.8 3.3 25 60-84 3-30 (117)
140 cd07253 Glo_EDI_BRP_like_2 Thi 20.8 91 0.002 21.5 2.4 26 59-84 3-31 (125)
141 COG5630 ARG2 Acetylglutamate s 20.7 2.9E+02 0.0062 26.1 6.0 46 10-55 382-430 (495)
No 1
>KOG1472|consensus
Probab=99.96 E-value=4.9e-31 Score=249.62 Aligned_cols=165 Identities=42% Similarity=0.662 Sum_probs=153.5
Q ss_pred EEECCe-EEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcC-ccEEEEccCcchHHHHHhcCCeEe
Q psy7904 6 LWCLGI-LWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHE-IYHFLTFAAKDAIGYFTRQGFTKD 83 (181)
Q Consensus 6 ~~~dg~-VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~g-i~~llt~Adn~Ai~FYkK~GF~~~ 83 (181)
.+.+++ +||++|+|+|++++|+||+||||+.+.|.+|+|++||+|++++.+..+ +.++++|||+.|+++|+|+||+++
T Consensus 424 ~~~d~~g~vggi~~r~f~~k~f~eivf~av~~~eqv~g~g~hlmnhlkd~~~~~~~i~~~ltyad~~aigyfkkqgfs~e 503 (720)
T KOG1472|consen 424 RIKDNEGVVGGICFRPFPEKGFTEIVFCAVTTDEQVKGSGTHLMNHLKDYVRSSSTIDYALTYADEGAIGYFKKQGFSKE 503 (720)
T ss_pred eeccccccccccccCcCcccCCcceeeccccCcccccccCcCchhhHHHHhhccchHHHHHHhhhhcccccccCccchhh
Confidence 344554 999999999999999999999999999999999999999999999877 899999999999999999999999
Q ss_pred eecCcccccCccccCCCceeEeeeecccccceehHHHHH-HHHHHHHHHHHHhhhccccccCCcccccCCCcccc-cc--
Q psy7904 84 IKLPKHLYEGYIKDYEDAMLMHCEIDKRIVYTHFVSVTQ-SQKHIINYITEQKLERVQGVQPGLKCFSEDCAICS-CN-- 159 (181)
Q Consensus 84 i~l~~~~~~gyikdYega~LMec~l~~~i~y~~~~~~i~-~qk~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~-- 159 (181)
+.+++..|.||||||||||+|.|.++|.|+|+++..++. .|++.+.++|+.....+++|||||+||+++++++| .+
T Consensus 504 i~~~~~~~~g~ikdye~~tl~~c~l~~~i~~t~~~~~~~~~~~a~l~~~i~~~~~~~~kv~~gl~~~~~~~~~~~~~~iP 583 (720)
T KOG1472|consen 504 IKFEKSPYVGYIKDYEGGTLMPCELLPEIPYTELSAIVEHPQKAKLGREIEPEIDEYFKVYPGLECFKDGVPQIPPRKIP 583 (720)
T ss_pred cccccCcCccccccccCccccchhhccCcchhhhhhhhhhhHHHHHHHhhccccccccccccccccccccccccCcccCC
Confidence 999999999999999999999999999999999999999 99999999999777899999999999999988888 55
Q ss_pred ----cceeeehhhcc
Q psy7904 160 ----LTVKRTVKYCR 170 (181)
Q Consensus 160 ----~~~~~~~~~~~ 170 (181)
.+|+......+
T Consensus 584 g~~E~~~~~~~~~~r 598 (720)
T KOG1472|consen 584 GFRESGWKPEKESYR 598 (720)
T ss_pred CchhhccCcchHHHH
Confidence 67777776666
No 2
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.58 E-value=2e-14 Score=99.14 Aligned_cols=76 Identities=18% Similarity=0.186 Sum_probs=66.3
Q ss_pred EEECCeEEEEEEEEEcCCC----CEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE--ccCc-chHHHHHhc
Q psy7904 6 LWCLGILWISICFRMFPTQ----GFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT--FAAK-DAIGYFTRQ 78 (181)
Q Consensus 6 ~~~dg~VIG~i~~r~~~~~----~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt--~Adn-~Ai~FYkK~ 78 (181)
+.++|++||++.+.+.... ..++|..++|+|++||+|+|+.||+++++.+++.|+..+.+ ..+| .|..||+|+
T Consensus 1 ~~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~~~k~ 80 (83)
T PF00583_consen 1 AEEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRFYEKL 80 (83)
T ss_dssp EEETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHHHHHT
T ss_pred CcCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHHHHHc
Confidence 4678999999999886543 68999999999999999999999999999999999998765 3444 489999999
Q ss_pred CCe
Q psy7904 79 GFT 81 (181)
Q Consensus 79 GF~ 81 (181)
||+
T Consensus 81 Gf~ 83 (83)
T PF00583_consen 81 GFE 83 (83)
T ss_dssp TEE
T ss_pred CCC
Confidence 996
No 3
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.57 E-value=2.5e-14 Score=99.68 Aligned_cols=75 Identities=23% Similarity=0.220 Sum_probs=62.7
Q ss_pred cEEEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeE
Q psy7904 3 PLKLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTK 82 (181)
Q Consensus 3 ~lv~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~ 82 (181)
.+++.+++++||++.+.+.. .+..|..++|+|++||+|+|+.||+++++.+.. ..+.+.++..+++||+|+||++
T Consensus 5 ~~~~~~~~~ivG~~~~~~~~--~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~---~~i~l~~~~~~~~fY~~~GF~~ 79 (79)
T PF13508_consen 5 FFVAEDDGEIVGFIRLWPNE--DFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS---KKIFLFTNPAAIKFYEKLGFEE 79 (79)
T ss_dssp EEEEEETTEEEEEEEEEETT--TEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC---SEEEEEEEHHHHHHHHHTTEEE
T ss_pred EEEEEECCEEEEEEEEEEcC--CEEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC---CcEEEEEcHHHHHHHHHCcCCC
Confidence 35677899999999997754 478999999999999999999999999998854 3455566678999999999974
No 4
>PRK07757 acetyltransferase; Provisional
Probab=99.56 E-value=3.9e-14 Score=108.86 Aligned_cols=99 Identities=16% Similarity=0.195 Sum_probs=80.0
Q ss_pred EEEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeE-
Q psy7904 4 LKLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTK- 82 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~- 82 (181)
+++..+|+++|++.+.... ...++|..++|+|++||+|+|+.||+++++++++.|+..+++.. .+..||+|+||+.
T Consensus 44 ~i~~~~~~lvG~~~l~~~~-~~~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~g~~~i~~~~--~~~~~Y~k~GF~~~ 120 (152)
T PRK07757 44 YVAEEEGEIVGCCALHILW-EDLAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALT--YQPEFFEKLGFREV 120 (152)
T ss_pred EEEEECCEEEEEEEEEecc-CCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCeEEEEe--CcHHHHHHCCCEEc
Confidence 3455789999999987644 34678989999999999999999999999999999998876543 3578999999976
Q ss_pred -eeecCcccccCccccCCCceeEeeeecccccc
Q psy7904 83 -DIKLPKHLYEGYIKDYEDAMLMHCEIDKRIVY 114 (181)
Q Consensus 83 -~i~l~~~~~~gyikdYega~LMec~l~~~i~y 114 (181)
...++.+.|.+++. |.-+|+++-
T Consensus 121 ~~~~~~~~~~~~~~~---------~~~~~~~~~ 144 (152)
T PRK07757 121 DKEALPQKVWADCIK---------CPKFPNCDE 144 (152)
T ss_pred ccccCChhHHhcCcc---------CCCCCCcch
Confidence 44567889999877 666666543
No 5
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.51 E-value=7.7e-14 Score=105.47 Aligned_cols=80 Identities=15% Similarity=0.077 Sum_probs=65.1
Q ss_pred EEEEECCeEEEEEEEEEcCC----CCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE--ccCc-chHHHHH
Q psy7904 4 LKLWCLGILWISICFRMFPT----QGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT--FAAK-DAIGYFT 76 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~----~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt--~Adn-~Ai~FYk 76 (181)
+++..+|++||++.+..... ...++|..++|+|++||+|+|+.||++++++|++.|+..+.. ..+| .|++||+
T Consensus 50 ~v~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~fY~ 129 (144)
T PRK10146 50 HLALLDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYL 129 (144)
T ss_pred EEEEECCEEEEEEEEEecccccccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHH
Confidence 45567899999999875321 124678899999999999999999999999999999987643 4444 7999999
Q ss_pred hcCCeEe
Q psy7904 77 RQGFTKD 83 (181)
Q Consensus 77 K~GF~~~ 83 (181)
|+||+..
T Consensus 130 ~~Gf~~~ 136 (144)
T PRK10146 130 REGYEQS 136 (144)
T ss_pred HcCCchh
Confidence 9999763
No 6
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.47 E-value=1.7e-13 Score=109.66 Aligned_cols=92 Identities=16% Similarity=0.216 Sum_probs=78.5
Q ss_pred EEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeEee
Q psy7904 5 KLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTKDI 84 (181)
Q Consensus 5 v~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~~i 84 (181)
++.++|.|||++.+.++...+.+|+..+||+|++|++|+|..|+++++..|++.|+..+..-+. ++.+||+++||+...
T Consensus 44 i~E~~g~viGC~aL~~~~~~~~gE~~~laV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt-~~~~~F~~~GF~~vd 122 (153)
T COG1246 44 IIERDGKVIGCAALHPVLEEDLGELRSLAVHPDYRGSGRGERLLERLLADARELGIKELFVLTT-RSPEFFAERGFTRVD 122 (153)
T ss_pred eeeeCCcEEEEEeecccCccCeeeEEEEEECHHhcCCCcHHHHHHHHHHHHHHcCCceeeeeec-ccHHHHHHcCCeECc
Confidence 4556899999999987666788999999999999999999999999999999999998754332 789999999997633
Q ss_pred --ecCcccccCcccc
Q psy7904 85 --KLPKHLYEGYIKD 97 (181)
Q Consensus 85 --~l~~~~~~gyikd 97 (181)
.+|.++|..|..-
T Consensus 123 ~~~LP~~~~~~~~~~ 137 (153)
T COG1246 123 KDELPEEVWSSYNFC 137 (153)
T ss_pred cccCCHHHHHHHHhh
Confidence 5888898877653
No 7
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.46 E-value=4.2e-13 Score=97.86 Aligned_cols=72 Identities=18% Similarity=0.135 Sum_probs=60.7
Q ss_pred cEEEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCC
Q psy7904 3 PLKLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGF 80 (181)
Q Consensus 3 ~lv~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF 80 (181)
.+++..+|+++|++.+. + . .+|..++|+|++||+|+|+.||+++++.+++ |+..+.+.++..|.+||+|+||
T Consensus 46 ~~v~~~~~~ivG~~~~~--~-~--~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 46 IFVAEEGGEIVGFAWLE--P-D--GEISHLYVLPEYRGRGIGRALLDAAEKEAKD-GIRRLTVEANERARRFYRKLGF 117 (117)
T ss_dssp EEEEEETTEEEEEEEEE--T-C--EEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT-TCEEEEEEC-HHHHHHHHHTT-
T ss_pred EEEEEECCEEEEEEEEc--C-C--CeEEEEEEChhhcCCcHHHHHHHHHHHHHHc-CCcEEEEEeCHHHHHHHHhCCC
Confidence 45677899999999986 2 2 3588899999999999999999999999977 9988887888889999999998
No 8
>PRK10314 putative acyltransferase; Provisional
Probab=99.45 E-value=3.6e-13 Score=106.27 Aligned_cols=81 Identities=14% Similarity=-0.002 Sum_probs=67.8
Q ss_pred EEEEECCeEEEEEEEEEcCC-CCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhc-CccEEEEccCcchHHHHHhcCCe
Q psy7904 4 LKLWCLGILWISICFRMFPT-QGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKH-EIYHFLTFAAKDAIGYFTRQGFT 81 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~-~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~-gi~~llt~Adn~Ai~FYkK~GF~ 81 (181)
+++..++++||++.+.+..+ ...++|..++|+|++||+|+|+.||+++++++++. +...+.+.+...|.+||+|+||+
T Consensus 51 ~~~~~~~~~vg~~r~~~~~~~~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a~~~a~~fY~k~GF~ 130 (153)
T PRK10314 51 ILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGAQAHLQNFYQSFGFI 130 (153)
T ss_pred EEEEECCEEEEEEEEecCCCCCCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEehHHHHHHHHHHCCCE
Confidence 45567899999999876432 23578999999999999999999999999999875 67777777877899999999998
Q ss_pred Eee
Q psy7904 82 KDI 84 (181)
Q Consensus 82 ~~i 84 (181)
..+
T Consensus 131 ~~g 133 (153)
T PRK10314 131 PVT 133 (153)
T ss_pred ECC
Confidence 853
No 9
>PTZ00330 acetyltransferase; Provisional
Probab=99.45 E-value=6.8e-13 Score=100.59 Aligned_cols=76 Identities=16% Similarity=0.200 Sum_probs=64.1
Q ss_pred ECCeEEEEEEEEEcCC---C--CEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeE
Q psy7904 8 CLGILWISICFRMFPT---Q--GFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTK 82 (181)
Q Consensus 8 ~dg~VIG~i~~r~~~~---~--~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~ 82 (181)
.+|++||++.+...+. . ...+|..++|+|++||+|+|+.||+++++++++.++..+...++..|++||+|+||+.
T Consensus 59 ~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~~n~~a~~~y~k~GF~~ 138 (147)
T PTZ00330 59 PTQRIVGTASLFVEPKFTRGGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDCTEDMVAFYKKLGFRA 138 (147)
T ss_pred CCCEEEEEEEEEeccccccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecChHHHHHHHHCCCEE
Confidence 4689999998754221 1 2468888999999999999999999999999999998887777678999999999986
Q ss_pred e
Q psy7904 83 D 83 (181)
Q Consensus 83 ~ 83 (181)
.
T Consensus 139 ~ 139 (147)
T PTZ00330 139 C 139 (147)
T ss_pred e
Confidence 3
No 10
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.45 E-value=1.1e-12 Score=100.60 Aligned_cols=99 Identities=16% Similarity=0.159 Sum_probs=72.4
Q ss_pred EEEEECCeEEEEEEEEEcCC---CCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHh-cCccEEE--EccCc-chHHHHH
Q psy7904 4 LKLWCLGILWISICFRMFPT---QGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKK-HEIYHFL--TFAAK-DAIGYFT 76 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~---~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~-~gi~~ll--t~Adn-~Ai~FYk 76 (181)
+++..+|++||++++..... ....|+ .++|+|++||+|+|+.||+++++++.+ .|+..+. +.++| .|+.||+
T Consensus 54 ~v~~~~~~~vG~~~~~~~~~~~~~~~~~~-~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~ 132 (162)
T PRK10140 54 LVACIDGDVVGHLTIDVQQRPRRSHVADF-GICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYK 132 (162)
T ss_pred EEEEECCEEEEEEEEecccccccceEEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHH
Confidence 45557899999999875422 223454 378999999999999999999999987 5877653 45555 6899999
Q ss_pred hcCCeEeeecCcccccCccccCCCceeEe
Q psy7904 77 RQGFTKDIKLPKHLYEGYIKDYEDAMLMH 105 (181)
Q Consensus 77 K~GF~~~i~l~~~~~~gyikdYega~LMe 105 (181)
|+||+..+..+...+.+ -.|.|..+|+
T Consensus 133 k~GF~~~g~~~~~~~~~--~~~~d~~~~~ 159 (162)
T PRK10140 133 KYGFEIEGTGKKYALRN--GEYVDAYYMA 159 (162)
T ss_pred HCCCEEEeecccceeeC--CeEEEEEEEE
Confidence 99999987766543211 2355555554
No 11
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.44 E-value=1.5e-12 Score=99.50 Aligned_cols=99 Identities=21% Similarity=0.212 Sum_probs=75.1
Q ss_pred EEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE--ccCc-chHHHHHhcCCe
Q psy7904 5 KLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT--FAAK-DAIGYFTRQGFT 81 (181)
Q Consensus 5 v~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt--~Adn-~Ai~FYkK~GF~ 81 (181)
.+..+|++||++++....+ .+++..++|+|++||+|+|+.||+++++.+++.++..+.. ..+| .|+.||+|.||+
T Consensus 44 ~~~~~~~~vG~~~~~~~~~--~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~k~Gf~ 121 (146)
T PRK09491 44 KLTVNGQMAAFAITQVVLD--EATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFN 121 (146)
T ss_pred EEEECCeEEEEEEEEeecC--ceEEEEEEECHHHccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHHHHHcCCE
Confidence 3457899999999876443 3567789999999999999999999999999999987654 3344 689999999999
Q ss_pred EeeecCcccccCccccCCCceeEeee
Q psy7904 82 KDIKLPKHLYEGYIKDYEDAMLMHCE 107 (181)
Q Consensus 82 ~~i~l~~~~~~gyikdYega~LMec~ 107 (181)
.....+.. |.. -..|+|..+|+..
T Consensus 122 ~~~~~~~~-~~~-~~~~~d~~~~~~~ 145 (146)
T PRK09491 122 EVTIRRNY-YPT-ADGREDAIIMALP 145 (146)
T ss_pred Eeeeeecc-ccC-CCCceeEEEEecc
Confidence 86554332 111 1137778888764
No 12
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.43 E-value=1e-12 Score=119.06 Aligned_cols=97 Identities=15% Similarity=0.197 Sum_probs=76.9
Q ss_pred EEEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeEe
Q psy7904 4 LKLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTKD 83 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~~ 83 (181)
+++..+|+++|++.+.++.+...+||..++|+|++||+|+|++||++++++|+++|+..+++.++ +|..||+|+||+..
T Consensus 325 ~V~~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~~~-~a~~fY~k~GF~~~ 403 (429)
T TIGR01890 325 SIIEHDGNIIGCAALYPYAEEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLTT-RTGHWFRERGFQTA 403 (429)
T ss_pred EEEEECCEEEEEEEEEecCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeec-chHHHHHHCCCEEC
Confidence 34557899999999988765567899999999999999999999999999999999998765544 47899999999875
Q ss_pred --eecCcccccCccccCCCc
Q psy7904 84 --IKLPKHLYEGYIKDYEDA 101 (181)
Q Consensus 84 --i~l~~~~~~gyikdYega 101 (181)
.++|..++..|-......
T Consensus 404 g~~~l~~~~~~~~~~~r~~~ 423 (429)
T TIGR01890 404 SVDELPEARRKLYNYQRNSK 423 (429)
T ss_pred ChhhCCHHHHHHhcccccCc
Confidence 345666555443333433
No 13
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.42 E-value=1.6e-12 Score=110.64 Aligned_cols=99 Identities=17% Similarity=0.126 Sum_probs=77.5
Q ss_pred EEEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEc--cCc-chHHHHHhcCC
Q psy7904 4 LKLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTF--AAK-DAIGYFTRQGF 80 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~--Adn-~Ai~FYkK~GF 80 (181)
+++..+|++||.+++........+||..++|+|++||+|+|+.||+++++.+++.|+..+.+. +.| .|..+|+|+||
T Consensus 161 ~v~~~~g~iVG~~~~~~~~~~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a~~ly~k~GF 240 (266)
T TIGR03827 161 FGVEDGGKIIALASAEMDPENGNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGMNITFARLGY 240 (266)
T ss_pred EEEEECCEEEEEEEEecCCCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhHHHHHHHcCC
Confidence 455678999999987543344568999999999999999999999999999999999987663 344 57999999999
Q ss_pred eEeeecCcccccCccc-cCCCceeEe
Q psy7904 81 TKDIKLPKHLYEGYIK-DYEDAMLMH 105 (181)
Q Consensus 81 ~~~i~l~~~~~~gyik-dYega~LMe 105 (181)
+..++++... ++. .|+|.-++.
T Consensus 241 ~~~G~l~n~~---~i~G~~~d~~i~~ 263 (266)
T TIGR03827 241 AYGGTLVNNT---NISGGFESMNIWY 263 (266)
T ss_pred ccccEEeecc---eecCCcccceeee
Confidence 9988887542 232 456554443
No 14
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.41 E-value=2.4e-12 Score=94.51 Aligned_cols=81 Identities=15% Similarity=0.071 Sum_probs=65.7
Q ss_pred EEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE--ccC-cchHHHHHhcCCe
Q psy7904 5 KLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT--FAA-KDAIGYFTRQGFT 81 (181)
Q Consensus 5 v~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt--~Ad-n~Ai~FYkK~GF~ 81 (181)
++.+++++||.+.+.... ...++..++|+|++||+|+|+.||+++++++.+.++..+.+ ... ..|+.||+|+||+
T Consensus 35 ~~~~~~~~vg~~~~~~~~--~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~i~~~~~~~n~~~~~~y~~~Gf~ 112 (131)
T TIGR01575 35 LARIGGKVVGYAGVQIVL--DEAHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNEIFLEVRVSNIAAQALYKKLGFN 112 (131)
T ss_pred EEecCCeEEEEEEEEecC--CCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCeEEEEEecccHHHHHHHHHcCCC
Confidence 344589999999987633 23578889999999999999999999999999988887765 333 3589999999998
Q ss_pred EeeecC
Q psy7904 82 KDIKLP 87 (181)
Q Consensus 82 ~~i~l~ 87 (181)
.....+
T Consensus 113 ~~~~~~ 118 (131)
T TIGR01575 113 EIAIRR 118 (131)
T ss_pred cccccc
Confidence 875544
No 15
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.39 E-value=2e-12 Score=104.41 Aligned_cols=76 Identities=16% Similarity=0.122 Sum_probs=65.3
Q ss_pred ECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE--ccCc-chHHHHHhcCCeEee
Q psy7904 8 CLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT--FAAK-DAIGYFTRQGFTKDI 84 (181)
Q Consensus 8 ~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt--~Adn-~Ai~FYkK~GF~~~i 84 (181)
.+|++||++.+..... ..+++..++|+|++||+|||+.||+++++++++.|+..+.+ .++| .|+.||+|+||+.+.
T Consensus 106 ~~g~iiG~i~l~~~~~-~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~klGF~~~~ 184 (191)
T TIGR02382 106 ASGDPRGYVTLRELND-TDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRLYIRSGANIES 184 (191)
T ss_pred cCCeEEEEEEEEecCC-CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCcccc
Confidence 4789999999986543 34789999999999999999999999999999999998765 4566 589999999998864
No 16
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.38 E-value=4.9e-12 Score=96.92 Aligned_cols=75 Identities=12% Similarity=0.204 Sum_probs=59.5
Q ss_pred CCeEEEEEEEEEc---C-C-CCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeEe
Q psy7904 9 LGILWISICFRMF---P-T-QGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTKD 83 (181)
Q Consensus 9 dg~VIG~i~~r~~---~-~-~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~~ 83 (181)
+|++||.+.+... . . .....|..++|+|++||+|||+.||++++++|++.|+..+.........+||+|+||+.+
T Consensus 63 ~~~ivG~~~~~~~~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~~~y~k~GF~~~ 142 (150)
T PLN02706 63 SGRIIATGSVFVERKFIRNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENKAFYEKCGYVRK 142 (150)
T ss_pred CCcEEEEEEEEEEeecccCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccHHHHHHCcCEEe
Confidence 5899999887421 1 1 134567779999999999999999999999999999998865443333579999999885
No 17
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.36 E-value=5.3e-12 Score=100.87 Aligned_cols=77 Identities=16% Similarity=0.195 Sum_probs=65.5
Q ss_pred EEEE-ECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeE
Q psy7904 4 LKLW-CLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTK 82 (181)
Q Consensus 4 lv~~-~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~ 82 (181)
+++. .+|+++|++++.... .++++|..++|+|++||+|+|+.||+++++++++.|+..+.+.. .++.||+|+||..
T Consensus 48 ~va~~~~~~iiG~~~~~~~~-~~~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~--~~~~fY~k~GF~~ 124 (169)
T PRK07922 48 WVAEHLDGEVVGCGALHVMW-EDLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLT--FEVEFFARHGFVE 124 (169)
T ss_pred EEEEecCCcEEEEEEEeecC-CCceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEe--ccHHHHHHCCCEE
Confidence 4555 678999998887644 35789999999999999999999999999999999999986543 3589999999987
Q ss_pred e
Q psy7904 83 D 83 (181)
Q Consensus 83 ~ 83 (181)
.
T Consensus 125 ~ 125 (169)
T PRK07922 125 I 125 (169)
T ss_pred C
Confidence 4
No 18
>PRK03624 putative acetyltransferase; Provisional
Probab=99.34 E-value=6.4e-12 Score=93.04 Aligned_cols=79 Identities=11% Similarity=0.029 Sum_probs=63.7
Q ss_pred EEEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE--ccCc-chHHHHHhcCC
Q psy7904 4 LKLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT--FAAK-DAIGYFTRQGF 80 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt--~Adn-~Ai~FYkK~GF 80 (181)
+++..++++||++++.... ....+..++|+|++||+|+|+.||+++.+++++.|+..+.+ .++| .|+.||+|+||
T Consensus 48 ~v~~~~~~~vG~~~~~~~~--~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~y~k~GF 125 (140)
T PRK03624 48 LVAEVGGEVVGTVMGGYDG--HRGWAYYLAVHPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGFYEALGY 125 (140)
T ss_pred EEEEcCCcEEEEEEeeccC--CCceEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHcCC
Confidence 4556689999998876422 22456778999999999999999999999999999887654 4444 58999999999
Q ss_pred eEee
Q psy7904 81 TKDI 84 (181)
Q Consensus 81 ~~~i 84 (181)
....
T Consensus 126 ~~~~ 129 (140)
T PRK03624 126 EEQD 129 (140)
T ss_pred cccc
Confidence 8754
No 19
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.34 E-value=8e-12 Score=92.88 Aligned_cols=78 Identities=17% Similarity=0.104 Sum_probs=63.4
Q ss_pred cEEEEECCeEEEEEEEEEcC----CC--CEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHH
Q psy7904 3 PLKLWCLGILWISICFRMFP----TQ--GFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFT 76 (181)
Q Consensus 3 ~lv~~~dg~VIG~i~~r~~~----~~--~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYk 76 (181)
.+++.++|+|||.+++.+.. ++ ..+.+..++|+|++||+|+|++||+++.+.+++.|+..++.++ .+.+||+
T Consensus 43 ~~~~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~--~~~~~Y~ 120 (127)
T PF13527_consen 43 CVVAEDDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVAVDPEYRGRGLGRQLMRALLERARERGVPFIFLFP--SSPPFYR 120 (127)
T ss_dssp EEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE---SSHHHHH
T ss_pred EEEEEECCEEEEEEEEEEEEEEECCEEEEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEec--CChhhhh
Confidence 46777899999999986541 11 2467889999999999999999999999999999999887776 4589999
Q ss_pred hcCCeE
Q psy7904 77 RQGFTK 82 (181)
Q Consensus 77 K~GF~~ 82 (181)
|+||+.
T Consensus 121 ~~G~~~ 126 (127)
T PF13527_consen 121 RFGFEY 126 (127)
T ss_dssp HTTEEE
T ss_pred cCCCEE
Confidence 999975
No 20
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.33 E-value=3.9e-12 Score=99.04 Aligned_cols=74 Identities=16% Similarity=0.143 Sum_probs=60.6
Q ss_pred eEEEEEEEEEcCCC----CEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCc-cEE--EEccCc-chHHHHHhcCCeE
Q psy7904 11 ILWISICFRMFPTQ----GFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEI-YHF--LTFAAK-DAIGYFTRQGFTK 82 (181)
Q Consensus 11 ~VIG~i~~r~~~~~----~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi-~~l--lt~Adn-~Ai~FYkK~GF~~ 82 (181)
+++|++..+..... +.++|..+||+|++||+|+|++||+++.+.+++.+. ..+ .+..+| .|++||+|.||+.
T Consensus 72 ~~~G~~~~~~~~~~~~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~~GF~~ 151 (177)
T COG0456 72 KVVGFLLVRVVDGRPSADHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRKLGFEV 151 (177)
T ss_pred ceeEEEEEEEecCCccccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHHHHHHHcCCEE
Confidence 58999988643332 257999999999999999999999999999999886 443 456666 5999999999998
Q ss_pred ee
Q psy7904 83 DI 84 (181)
Q Consensus 83 ~i 84 (181)
..
T Consensus 152 ~~ 153 (177)
T COG0456 152 VK 153 (177)
T ss_pred Ee
Confidence 53
No 21
>PRK09831 putative acyltransferase; Provisional
Probab=99.33 E-value=5.3e-12 Score=97.33 Aligned_cols=73 Identities=15% Similarity=-0.003 Sum_probs=59.5
Q ss_pred EEEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeEe
Q psy7904 4 LKLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTKD 83 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~~ 83 (181)
+++..+|+++|++++.. ..+..++|+|++||+|+|+.||+++++.++. +.+.+++.|++||+|+||...
T Consensus 56 ~v~~~~~~iiG~~~~~~------~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-----l~v~~~~~a~~~Y~k~Gf~~~ 124 (147)
T PRK09831 56 RVAVINAQPVGFITCIE------HYIDMLFVDPEYTRRGVASALLKPLIKSESE-----LTVDASITAKPFFERYGFQTV 124 (147)
T ss_pred EEEEECCEEEEEEEehh------ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh-----eEeecchhhHHHHHHCCCEEe
Confidence 45667899999988742 2466789999999999999999999998875 334566789999999999987
Q ss_pred eecC
Q psy7904 84 IKLP 87 (181)
Q Consensus 84 i~l~ 87 (181)
+..+
T Consensus 125 g~~~ 128 (147)
T PRK09831 125 KQQR 128 (147)
T ss_pred eccc
Confidence 6654
No 22
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.33 E-value=1.2e-11 Score=94.67 Aligned_cols=86 Identities=21% Similarity=0.308 Sum_probs=69.9
Q ss_pred cEEEEE-CCeEEEEEEEEEcCC-CCEEEEEEEEeCCCCccCCHHHHHHHHHHHHH-HhcCccEEEE--ccCc-chHHHHH
Q psy7904 3 PLKLWC-LGILWISICFRMFPT-QGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYH-KKHEIYHFLT--FAAK-DAIGYFT 76 (181)
Q Consensus 3 ~lv~~~-dg~VIG~i~~r~~~~-~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~a-k~~gi~~llt--~Adn-~Ai~FYk 76 (181)
++++.+ +|++||.+.+++... .+.+++. +.|.+++|++|+|+.|+++++++| ++.|+..+.. .++| .|+.||+
T Consensus 52 ~~~v~~~~g~iiG~~~~~~~~~~~~~~~~~-~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~ 130 (155)
T PF13420_consen 52 LFLVAEEDGKIIGYVSLRDIDPYNHTAELS-IYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYK 130 (155)
T ss_dssp EEEEEECTTEEEEEEEEEESSSGTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHH
T ss_pred EEEEEEcCCcEEEEEEEEeeeccCCEEEEe-eEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHH
Confidence 456666 899999999987543 4567776 457799999999999999999999 8999998753 5665 5899999
Q ss_pred hcCCeEeeecCcc
Q psy7904 77 RQGFTKDIKLPKH 89 (181)
Q Consensus 77 K~GF~~~i~l~~~ 89 (181)
|+||+.++.++..
T Consensus 131 ~~GF~~~g~~~~~ 143 (155)
T PF13420_consen 131 KLGFEEEGELKDH 143 (155)
T ss_dssp HTTEEEEEEEEEE
T ss_pred hCCCEEEEEEecE
Confidence 9999998877654
No 23
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.33 E-value=1.8e-11 Score=99.53 Aligned_cols=104 Identities=14% Similarity=0.149 Sum_probs=82.2
Q ss_pred ccEEEEE-C-CeEEEEEEEEEcCCC----CEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE--ccCcc-hH
Q psy7904 2 VPLKLWC-L-GILWISICFRMFPTQ----GFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT--FAAKD-AI 72 (181)
Q Consensus 2 ~~lv~~~-d-g~VIG~i~~r~~~~~----~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt--~Adn~-Ai 72 (181)
+|+++.. + |+|+|++++.+|.++ +.+| ..++|+|+.||+|+|++||+.|+++++..|+..++. .++|. .+
T Consensus 52 ~p~~V~~~~~g~v~G~a~~~~fr~r~ay~~tve-~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~n~aSi 130 (169)
T COG1247 52 YPVVVAEEEDGKVLGYASAGPFRERPAYRHTVE-LSIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIESDNLASI 130 (169)
T ss_pred ceEEEEEcCCCeEEEEEEeeeccCccccceEEE-EEEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEcCCCcHhH
Confidence 4666553 4 899999999887754 4555 568999999999999999999999999999988764 45554 59
Q ss_pred HHHHhcCCeEeeecCcccccCcccc-CCCceeEeeeec
Q psy7904 73 GYFTRQGFTKDIKLPKHLYEGYIKD-YEDAMLMHCEID 109 (181)
Q Consensus 73 ~FYkK~GF~~~i~l~~~~~~gyikd-Yega~LMec~l~ 109 (181)
+|++++||++.+.++.. |+-.+ +-|..+|++.+.
T Consensus 131 ~lh~~~GF~~~G~~~~v---g~k~g~wld~~~~~~~l~ 165 (169)
T COG1247 131 ALHEKLGFEEVGTFPEV---GDKFGRWLDLVLMQLLLE 165 (169)
T ss_pred HHHHHCCCEEecccccc---ccccceEEeeeeeehhhc
Confidence 99999999999888765 44332 355778887654
No 24
>PHA00673 acetyltransferase domain containing protein
Probab=99.31 E-value=2.3e-11 Score=97.56 Aligned_cols=80 Identities=11% Similarity=0.088 Sum_probs=67.8
Q ss_pred EEEEECCeEEEEEEEEEcCC-----CCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCc--chHHHHH
Q psy7904 4 LKLWCLGILWISICFRMFPT-----QGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAK--DAIGYFT 76 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~-----~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn--~Ai~FYk 76 (181)
+++.++|+|||++.+...+. ..++.|.++.|+|++||+|+|++||++++++|++.|+..+.+.|.+ +-+.||.
T Consensus 58 lVa~~~g~vVG~~~l~~~p~l~~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~~~tv~fy~ 137 (154)
T PHA00673 58 LGVFRGEELVGFACLLVTPVPHFKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTEGRLVQLLP 137 (154)
T ss_pred EEEEECCEEEEEEEEEEecCCccCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCCccchHHHH
Confidence 45667899999888765442 2467899999999999999999999999999999999999876543 5799999
Q ss_pred hcCCeEe
Q psy7904 77 RQGFTKD 83 (181)
Q Consensus 77 K~GF~~~ 83 (181)
++|+...
T Consensus 138 ~~g~~~~ 144 (154)
T PHA00673 138 AAGYRET 144 (154)
T ss_pred hCCchhh
Confidence 9999874
No 25
>PLN02825 amino-acid N-acetyltransferase
Probab=99.31 E-value=1.2e-11 Score=115.27 Aligned_cols=78 Identities=14% Similarity=0.228 Sum_probs=68.6
Q ss_pred EEEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeE
Q psy7904 4 LKLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTK 82 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~ 82 (181)
+++..||++||++.+.++.+...+||..+||+|++||+|+|++||+++++.|++.|+..+...+ ..|..||+|+||..
T Consensus 410 ~V~e~Dg~IVG~aal~~~~~~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Llt-t~a~~fY~k~GF~~ 487 (515)
T PLN02825 410 VVVEREGSIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLT-TRTADWFVRRGFSE 487 (515)
T ss_pred EEEEECCEEEEEEEEEeecCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEe-CcHHHHHHHCCCEE
Confidence 4556789999999988877666789999999999999999999999999999999999986544 45799999999976
No 26
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.30 E-value=1.2e-11 Score=108.32 Aligned_cols=75 Identities=17% Similarity=0.212 Sum_probs=65.1
Q ss_pred EEEE-ECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeE
Q psy7904 4 LKLW-CLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTK 82 (181)
Q Consensus 4 lv~~-~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~ 82 (181)
+++. ++|++||++.+.. .+|..+||+|++||+|+|+.||+++++++++.|+.++.+.+++.|.+||+|+||+.
T Consensus 8 ~~v~~~~~~iVG~~~l~~------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~~~fYek~GF~~ 81 (297)
T cd02169 8 VGIFDDAGELIATGSIAG------NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKNAKFFRGLGFKE 81 (297)
T ss_pred EEEEEECCEEEEEEEecc------CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccHHHHHHHCCCEE
Confidence 3444 4699999887742 26889999999999999999999999999999999998888888899999999987
Q ss_pred ee
Q psy7904 83 DI 84 (181)
Q Consensus 83 ~i 84 (181)
..
T Consensus 82 ~~ 83 (297)
T cd02169 82 LA 83 (297)
T ss_pred ec
Confidence 54
No 27
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.30 E-value=1.5e-11 Score=111.59 Aligned_cols=80 Identities=14% Similarity=0.239 Sum_probs=68.2
Q ss_pred EEEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeEe
Q psy7904 4 LKLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTKD 83 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~~ 83 (181)
+++.++++++|++.+.++.....++|..++|+|++||+|+|++||+++++++++.|+..+.+.+ ..|++||+|+||+..
T Consensus 337 ~va~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~-~~a~~fY~k~GF~~~ 415 (441)
T PRK05279 337 TVIERDGLIIGCAALYPFPEEKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLT-TRTAHWFLERGFVPV 415 (441)
T ss_pred EEEEECCEEEEEEEEEEcCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEec-chHHHHHHHCcCEEC
Confidence 3556789999999887765545789999999999999999999999999999999999875443 468999999999875
Q ss_pred e
Q psy7904 84 I 84 (181)
Q Consensus 84 i 84 (181)
+
T Consensus 416 g 416 (441)
T PRK05279 416 D 416 (441)
T ss_pred C
Confidence 3
No 28
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.30 E-value=2.3e-11 Score=98.12 Aligned_cols=79 Identities=16% Similarity=0.131 Sum_probs=65.6
Q ss_pred EEEE-CCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE--ccCc-chHHHHHhcCC
Q psy7904 5 KLWC-LGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT--FAAK-DAIGYFTRQGF 80 (181)
Q Consensus 5 v~~~-dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt--~Adn-~Ai~FYkK~GF 80 (181)
++.+ +|++||++.+..... ...+|..++|+|++||+|+|+.||+++++++++.|++.+.+ .++| .|+.||+|+||
T Consensus 105 v~~~~~g~~vG~~~l~~~~~-~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~Gf 183 (194)
T PRK10975 105 LLRDASGQIQGFVTLRELND-TDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYIRSGA 183 (194)
T ss_pred EEEcCCCCEEEEEEEEecCC-CceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHHCCC
Confidence 4443 578999999876543 34788999999999999999999999999999999998764 4455 58999999999
Q ss_pred eEee
Q psy7904 81 TKDI 84 (181)
Q Consensus 81 ~~~i 84 (181)
+.+.
T Consensus 184 ~~~~ 187 (194)
T PRK10975 184 NIES 187 (194)
T ss_pred eEeE
Confidence 9864
No 29
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.29 E-value=2.1e-11 Score=95.93 Aligned_cols=78 Identities=14% Similarity=0.081 Sum_probs=62.8
Q ss_pred CCeEEEEEEEEEcCC-CCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE--ccCc-chHHHHHhcCCeEee
Q psy7904 9 LGILWISICFRMFPT-QGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT--FAAK-DAIGYFTRQGFTKDI 84 (181)
Q Consensus 9 dg~VIG~i~~r~~~~-~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt--~Adn-~Ai~FYkK~GF~~~i 84 (181)
+|++||++++...+. .....+..++|+|++||+|||+.|+++++++++..++..+.+ ..+| .|+.||+|+||+...
T Consensus 48 ~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~ly~k~G~~~~~ 127 (157)
T TIGR02406 48 GGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARGKGLARRLLEALLERVACERVRHLETTITPDNQASRALFKALARRRGV 127 (157)
T ss_pred CCeEEEEEEEEecCCCCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHHHHHhCcccCC
Confidence 579999987654332 245778899999999999999999999999999888887654 4555 589999999997744
Q ss_pred ec
Q psy7904 85 KL 86 (181)
Q Consensus 85 ~l 86 (181)
..
T Consensus 128 ~~ 129 (157)
T TIGR02406 128 HL 129 (157)
T ss_pred Ce
Confidence 33
No 30
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.28 E-value=1.7e-11 Score=116.02 Aligned_cols=95 Identities=21% Similarity=0.284 Sum_probs=74.8
Q ss_pred EEEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeEe
Q psy7904 4 LKLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTKD 83 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~~ 83 (181)
+++..+|++||++.+.... .+.++|..++|+|++||+|+|+.||+++++++++.|+..+.+.+ .+..||+|+||+..
T Consensus 506 ~Va~~~g~IVG~~~l~~~~-~~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~~--~a~~FYek~GF~~~ 582 (614)
T PRK12308 506 AVAEHHGEVTGCASLYIYD-SGLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFVLT--RVPEFFMKQGFSPT 582 (614)
T ss_pred EEEEECCEEEEEEEEEEcC-CCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEee--CcHHHHHHCCCEEC
Confidence 4566789999999987643 35689999999999999999999999999999999999876543 46899999999875
Q ss_pred eecCcccccCccccCCCceeEeeeeccc
Q psy7904 84 IKLPKHLYEGYIKDYEDAMLMHCEIDKR 111 (181)
Q Consensus 84 i~l~~~~~~gyikdYega~LMec~l~~~ 111 (181)
... ++....++.|++-|+
T Consensus 583 ~~~----------~~~~~~~~~~~~~~~ 600 (614)
T PRK12308 583 SKS----------LLPEKVLKDCDQCPR 600 (614)
T ss_pred Ccc----------cCChHHHHhhccCCC
Confidence 311 233556677765543
No 31
>PRK13688 hypothetical protein; Provisional
Probab=99.26 E-value=4.2e-11 Score=95.63 Aligned_cols=78 Identities=19% Similarity=0.208 Sum_probs=59.6
Q ss_pred EEEEECCeEEEEEEEEEcC---------CCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHH
Q psy7904 4 LKLWCLGILWISICFRMFP---------TQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGY 74 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~---------~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~F 74 (181)
+++..++++||++.+.... ....++|..++|+|++||+|+|++||+++.+ .++. +.+.+++.|.+|
T Consensus 48 ~~~~~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a~~----~~~~-~~~~~~~~a~~F 122 (156)
T PRK13688 48 YGIYYGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKLEVLPKYQNRGYGEMLVDFAKS----FQLP-IKTIARNKSKDF 122 (156)
T ss_pred EEEEECCEEEEEEEEEecCCcccccccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHH----hCCe-EEEEeccchHHH
Confidence 4566789999988764311 2356899999999999999999999987554 3443 445567789999
Q ss_pred HHhcCCeEeeec
Q psy7904 75 FTRQGFTKDIKL 86 (181)
Q Consensus 75 YkK~GF~~~i~l 86 (181)
|+|+||+.....
T Consensus 123 Y~k~GF~~~~~~ 134 (156)
T PRK13688 123 WLKLGFTPVEYK 134 (156)
T ss_pred HHhCCCEEeEEe
Confidence 999999886544
No 32
>KOG3139|consensus
Probab=99.26 E-value=5e-11 Score=96.14 Aligned_cols=91 Identities=13% Similarity=0.089 Sum_probs=70.9
Q ss_pred cEEEEECCe-EEEEEEEEEcCCC--CEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEcc--C-cchHHHHH
Q psy7904 3 PLKLWCLGI-LWISICFRMFPTQ--GFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFA--A-KDAIGYFT 76 (181)
Q Consensus 3 ~lv~~~dg~-VIG~i~~r~~~~~--~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~A--d-n~Ai~FYk 76 (181)
.+++.+++. .||.+....-.+. ..++|..+||++++||+|||+.|.+.+++.++.+|+..++..+ . ..|.++|+
T Consensus 58 ~~~a~d~~~~~VGai~ck~~~~r~~~rgyi~mLaV~~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~LY~ 137 (165)
T KOG3139|consen 58 CFLALDEKGDTVGAIVCKLDTHRNTLRGYIAMLAVDSEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSALRLYE 137 (165)
T ss_pred EEEEEcCCCceEEEEEEeccccCCcceEEEEEEEechhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHHHHHHH
Confidence 455555444 5998888653333 3689999999999999999999999999999999999976543 2 36999999
Q ss_pred hcCCeEeeecCcccccC
Q psy7904 77 RQGFTKDIKLPKHLYEG 93 (181)
Q Consensus 77 K~GF~~~i~l~~~~~~g 93 (181)
+.||.....+.+-.|+|
T Consensus 138 sLGF~r~~r~~~YYlng 154 (165)
T KOG3139|consen 138 SLGFKRDKRLFRYYLNG 154 (165)
T ss_pred hcCceEecceeEEEECC
Confidence 99999876554434444
No 33
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=99.21 E-value=1.2e-10 Score=103.34 Aligned_cols=77 Identities=14% Similarity=0.146 Sum_probs=66.8
Q ss_pred EEEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeEe
Q psy7904 4 LKLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTKD 83 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~~ 83 (181)
+++.++|++||++.+.. . .|..+||+|++||+|+|+.||+++++.+++.|+.++.+++.+.+.+||+|+||...
T Consensus 34 vv~~~~~~lVg~g~l~g----~--~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~~~fy~klGF~~i 107 (332)
T TIGR00124 34 IAVYEDEEIIGCGGIAG----N--VIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEYAALFEYCGFKTL 107 (332)
T ss_pred EEEEECCEEEEEEEEec----C--EEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchHHHHHHHcCCEEe
Confidence 45667899999988742 1 37889999999999999999999999999999999999988878899999999885
Q ss_pred eec
Q psy7904 84 IKL 86 (181)
Q Consensus 84 i~l 86 (181)
...
T Consensus 108 ~~~ 110 (332)
T TIGR00124 108 AEA 110 (332)
T ss_pred eee
Confidence 433
No 34
>PRK10514 putative acetyltransferase; Provisional
Probab=99.18 E-value=1.3e-10 Score=88.18 Aligned_cols=72 Identities=14% Similarity=0.133 Sum_probs=55.7
Q ss_pred ECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCc-chHHHHHhcCCeEeeec
Q psy7904 8 CLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAK-DAIGYFTRQGFTKDIKL 86 (181)
Q Consensus 8 ~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn-~Ai~FYkK~GF~~~i~l 86 (181)
.++++||++++.. .++..++|+|++||||+|+.||+++.+.+.+ + .+.+..+| .|++||+|+||+.....
T Consensus 57 ~~~~~iG~~~~~~------~~~~~~~v~p~~rgkGig~~Ll~~~~~~~~~--i-~~~v~~~N~~a~~~yek~Gf~~~~~~ 127 (145)
T PRK10514 57 ERDQPVGFMLLSG------GHMEALFVDPDVRGCGVGRMLVEHALSLHPE--L-TTDVNEQNEQAVGFYKKMGFKVTGRS 127 (145)
T ss_pred cCCcEEEEEEEec------CcEeEEEECHHhccCCHHHHHHHHHHHhccc--c-EEEeecCCHHHHHHHHHCCCEEeccc
Confidence 4789999998753 2355789999999999999999999987542 2 34444555 69999999999997655
Q ss_pred Cc
Q psy7904 87 PK 88 (181)
Q Consensus 87 ~~ 88 (181)
+.
T Consensus 128 ~~ 129 (145)
T PRK10514 128 EV 129 (145)
T ss_pred cc
Confidence 43
No 35
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.16 E-value=2.3e-10 Score=96.91 Aligned_cols=77 Identities=10% Similarity=-0.066 Sum_probs=61.7
Q ss_pred EEEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCc-chHHHHHhcCCeE
Q psy7904 4 LKLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAK-DAIGYFTRQGFTK 82 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn-~Ai~FYkK~GF~~ 82 (181)
+++..+|++||++.+.+.... ..++..++|+|++||+|+|+.||+++++.+. +...+++..+| .|+.||+++||+.
T Consensus 49 ~~~~~~~~~vG~~~~~~~~~~-~~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~--~~~~~~~~~~n~~a~~fy~~~Gf~~ 125 (292)
T TIGR03448 49 LVAVDSDPIVGYANLVPARGT-DPAMAELVVHPAHRRRGIGRALIRALLAKGG--GRLRVWAHGDLPAARALASRLGLVP 125 (292)
T ss_pred EEEEECCEEEEEEEEEcCCCC-cceEEEEEECHhhcCCCHHHHHHHHHHHhcc--CceEEEEcCCCHHHHHHHHHCCCEE
Confidence 556678999999998765332 3578899999999999999999999999875 33455666555 5899999999976
Q ss_pred e
Q psy7904 83 D 83 (181)
Q Consensus 83 ~ 83 (181)
.
T Consensus 126 ~ 126 (292)
T TIGR03448 126 T 126 (292)
T ss_pred c
Confidence 4
No 36
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.15 E-value=9.5e-10 Score=86.85 Aligned_cols=102 Identities=18% Similarity=0.109 Sum_probs=76.4
Q ss_pred cEEEEECCeEEEEEEEEEcC-CCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHh-cCccEEE--EccCc-chHHHHHh
Q psy7904 3 PLKLWCLGILWISICFRMFP-TQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKK-HEIYHFL--TFAAK-DAIGYFTR 77 (181)
Q Consensus 3 ~lv~~~dg~VIG~i~~r~~~-~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~-~gi~~ll--t~Adn-~Ai~FYkK 77 (181)
.+++..+|++||.+++.... ..+.+||.+ .++|++||+|||+.++..+.+++.+ .+++.+. +.++| .+..+++|
T Consensus 69 ~~~i~~~~~~iG~~~l~~~~~~~~~~~ig~-~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~ek 147 (179)
T PRK10151 69 MFMIFKEDELIGVLSFNRIEPLNKTAYIGY-WLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVALR 147 (179)
T ss_pred EEEEEECCEEEEEEEEEeeccCCCceEEEE-EEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHHH
Confidence 45666789999999987643 234578776 6999999999999999999999985 5687764 45666 47999999
Q ss_pred cCCeEeeecCcccccCccccCCCceeEeee
Q psy7904 78 QGFTKDIKLPKHLYEGYIKDYEDAMLMHCE 107 (181)
Q Consensus 78 ~GF~~~i~l~~~~~~gyikdYega~LMec~ 107 (181)
+||+.++.+....+.+ -.|.|..+|+..
T Consensus 148 ~Gf~~~g~~~~~~~~~--g~~~D~~~~~~~ 175 (179)
T PRK10151 148 NGFTLEGCLKQAEYLN--GAYDDVNLYARI 175 (179)
T ss_pred CCCEEEeEeccceEEC--CEEEEEEEEEEe
Confidence 9999988776543211 135566666653
No 37
>PHA01807 hypothetical protein
Probab=99.14 E-value=2.6e-10 Score=90.93 Aligned_cols=76 Identities=9% Similarity=-0.050 Sum_probs=60.7
Q ss_pred cEEEEECCeEEEEEEEEEcCCCCEEEEE---EEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE--ccCc-chHHHHH
Q psy7904 3 PLKLWCLGILWISICFRMFPTQGFTEIV---FCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT--FAAK-DAIGYFT 76 (181)
Q Consensus 3 ~lv~~~dg~VIG~i~~r~~~~~~~~EI~---~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt--~Adn-~Ai~FYk 76 (181)
++++..+|+++|++++......+..++. .++|+|++||+|+|++||+++++.|++.|+..+.. ..+| .|+.||+
T Consensus 55 ~lva~~dg~lvG~~~l~~~~~~~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~y~ 134 (153)
T PHA01807 55 ELLVFRDGKLAGIAVLVFEDDPHVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIHYR 134 (153)
T ss_pred EEEEEECCEEEEEEEEEcCCCcceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHHHH
Confidence 5777789999999998765443334443 46999999999999999999999999999987643 4444 5899999
Q ss_pred hc
Q psy7904 77 RQ 78 (181)
Q Consensus 77 K~ 78 (181)
+.
T Consensus 135 ~~ 136 (153)
T PHA01807 135 RV 136 (153)
T ss_pred hc
Confidence 84
No 38
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.13 E-value=6e-10 Score=88.51 Aligned_cols=100 Identities=16% Similarity=0.190 Sum_probs=74.4
Q ss_pred cEEEEECCeEEEEEEEEEcCC-CCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHh-cCccEEEE--ccCc-chHHHHHh
Q psy7904 3 PLKLWCLGILWISICFRMFPT-QGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKK-HEIYHFLT--FAAK-DAIGYFTR 77 (181)
Q Consensus 3 ~lv~~~dg~VIG~i~~r~~~~-~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~-~gi~~llt--~Adn-~Ai~FYkK 77 (181)
.+++..+|++||++.+..... ...+++ .++|+|++||+|+|+.+++.+.+++.+ .++..+.. .++| .|+.||+|
T Consensus 59 ~~~i~~~g~~iG~~~~~~~~~~~~~~~~-~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek 137 (186)
T PRK15130 59 RFVVECDGEKAGLVELVEINHVHRRAEF-QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRK 137 (186)
T ss_pred EEEEEECCEEEEEEEEEeecCCCCeEEE-EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHHH
Confidence 356667899999999866432 234666 478999999999999999999999975 68887754 4455 58999999
Q ss_pred cCCeEeeecCcccccCccc-cCCCceeEee
Q psy7904 78 QGFTKDIKLPKHLYEGYIK-DYEDAMLMHC 106 (181)
Q Consensus 78 ~GF~~~i~l~~~~~~gyik-dYega~LMec 106 (181)
.||+....++.... +. .|.|..+|..
T Consensus 138 ~GF~~~~~~~~~~~---~~g~~~d~~~~~~ 164 (186)
T PRK15130 138 LGFEVEGELIHEFF---INGEYRNTIRMCI 164 (186)
T ss_pred CCCEEEEEEeheEE---ECCEEEEEEEEEe
Confidence 99999876654321 11 4556666665
No 39
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.11 E-value=6.3e-10 Score=94.20 Aligned_cols=80 Identities=16% Similarity=0.128 Sum_probs=62.6
Q ss_pred EEEEE--CCeEEEEEEEEEcCC-CCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE--ccCc-chHHHHHh
Q psy7904 4 LKLWC--LGILWISICFRMFPT-QGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT--FAAK-DAIGYFTR 77 (181)
Q Consensus 4 lv~~~--dg~VIG~i~~r~~~~-~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt--~Adn-~Ai~FYkK 77 (181)
+++.. +|++||++.+....+ .+..+|..++|+|++||+|+|+.||+++++++++.|+..+.+ .++| .|++||+|
T Consensus 201 ~~a~~~~~~~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~~y~k 280 (292)
T TIGR03448 201 FLAFDDAPGELLGFHWTKVHPDEPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVRTYEK 280 (292)
T ss_pred EEEEECCCCcEEEEEEEEecCCCCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHHHHH
Confidence 44555 589999876554332 234567778999999999999999999999999999887654 4455 58999999
Q ss_pred cCCeEe
Q psy7904 78 QGFTKD 83 (181)
Q Consensus 78 ~GF~~~ 83 (181)
+||+..
T Consensus 281 ~GF~~~ 286 (292)
T TIGR03448 281 LGFTVA 286 (292)
T ss_pred cCCEEc
Confidence 999874
No 40
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.09 E-value=1.4e-09 Score=83.53 Aligned_cols=85 Identities=18% Similarity=0.099 Sum_probs=65.3
Q ss_pred ccEEEEECCeEEEEEEEEEcC-----CCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhc-CccEEEE--ccCc-chH
Q psy7904 2 VPLKLWCLGILWISICFRMFP-----TQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKH-EIYHFLT--FAAK-DAI 72 (181)
Q Consensus 2 ~~lv~~~dg~VIG~i~~r~~~-----~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~-gi~~llt--~Adn-~Ai 72 (181)
.++++..+|+++|++++.... ..+...+..++|++++||+|+|+.+|+.+++++.+. ++..+.+ .++| .|+
T Consensus 49 ~~~v~~~dg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~ 128 (152)
T PF13523_consen 49 HPYVAEDDGEPIGYFEIYWPDEDYDADDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAI 128 (152)
T ss_dssp EEEEEEETTEEEEEEEEEEGGGSS---TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHH
T ss_pred eEEEEEECCEEEEEEEEecccccccCCCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHH
Confidence 367888899999999885311 234566788899999999999999999999999876 7888754 5666 489
Q ss_pred HHHHhcCCeEeeec
Q psy7904 73 GYFTRQGFTKDIKL 86 (181)
Q Consensus 73 ~FYkK~GF~~~i~l 86 (181)
.+|+|.||+..+++
T Consensus 129 ~~~~k~GF~~~g~~ 142 (152)
T PF13523_consen 129 RLYEKAGFRKVGEF 142 (152)
T ss_dssp HHHHHTT-EEEEEE
T ss_pred HHHHHcCCEEeeEE
Confidence 99999999886554
No 41
>PRK10562 putative acetyltransferase; Provisional
Probab=99.04 E-value=1.5e-09 Score=83.12 Aligned_cols=74 Identities=15% Similarity=0.074 Sum_probs=56.2
Q ss_pred EEEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCc-chHHHHHhcCCeE
Q psy7904 4 LKLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAK-DAIGYFTRQGFTK 82 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn-~Ai~FYkK~GF~~ 82 (181)
+++..+|++||++++... .++..++|+|++||+|||+.||+++++.+.. ..+.+..+| .|++||+|+||+.
T Consensus 51 ~v~~~~~~~iG~~~~~~~-----~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~---~~~~v~~~N~~s~~~y~k~Gf~~ 122 (145)
T PRK10562 51 WVWEEDGKLLGFVSVLEG-----RFVGALFVAPKAVRRGIGKALMQHVQQRYPH---LSLEVYQKNQRAVNFYHAQGFRI 122 (145)
T ss_pred EEEEECCEEEEEEEEeec-----cEEEEEEECHHHcCCCHHHHHHHHHHhhCCe---EEEEEEcCChHHHHHHHHCCCEE
Confidence 355668899999988532 2466789999999999999999999885432 223344545 6899999999998
Q ss_pred eee
Q psy7904 83 DIK 85 (181)
Q Consensus 83 ~i~ 85 (181)
.+.
T Consensus 123 ~~~ 125 (145)
T PRK10562 123 VDS 125 (145)
T ss_pred ccc
Confidence 643
No 42
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.01 E-value=2.2e-09 Score=100.65 Aligned_cols=75 Identities=16% Similarity=0.157 Sum_probs=61.1
Q ss_pred CCeEEEEEEEEE----cCC-CCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEE--EccCc-chHHHHHhcCC
Q psy7904 9 LGILWISICFRM----FPT-QGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFL--TFAAK-DAIGYFTRQGF 80 (181)
Q Consensus 9 dg~VIG~i~~r~----~~~-~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~ll--t~Adn-~Ai~FYkK~GF 80 (181)
+|++||++.... +.+ ....++..++|+|++||+|+|+.||+++++++++.|+..+. +..+| .|+.||+|+||
T Consensus 133 ~g~IVG~~~~~~~~~~~~d~~~~~~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~~Ai~fY~klGf 212 (547)
T TIGR03103 133 SGAIIGTVMGVDHRKAFNDPEHGSSLWCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQAIALYEKLGF 212 (547)
T ss_pred CCeEEEEEEEEeccccccCCCCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHCCC
Confidence 589999987532 111 12367889999999999999999999999999999998764 35566 58999999999
Q ss_pred eEe
Q psy7904 81 TKD 83 (181)
Q Consensus 81 ~~~ 83 (181)
+..
T Consensus 213 ~~~ 215 (547)
T TIGR03103 213 RRI 215 (547)
T ss_pred EEe
Confidence 764
No 43
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.00 E-value=5.3e-09 Score=83.74 Aligned_cols=78 Identities=10% Similarity=0.011 Sum_probs=62.4
Q ss_pred CCeEEEEEEEEEcCC--CCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHh-cCccEEE--EccCc-chHHHHHhcCCeE
Q psy7904 9 LGILWISICFRMFPT--QGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKK-HEIYHFL--TFAAK-DAIGYFTRQGFTK 82 (181)
Q Consensus 9 dg~VIG~i~~r~~~~--~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~-~gi~~ll--t~Adn-~Ai~FYkK~GF~~ 82 (181)
+|++||.+.+..... ...+|+. ++|+|++||+|||+.+++.+.+++.+ .|++.+. +.++| .|..+|+|+||+.
T Consensus 85 ~~~~iG~i~l~~~~~~~~~~~eig-~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l~ek~Gf~~ 163 (194)
T PRK10809 85 EKEIIGVANFSNVVRGSFHACYLG-YSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDLLARLGFEK 163 (194)
T ss_pred CCeEEEEEEEEeecCCCeeeEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHHHHHCCCcE
Confidence 579999999876542 1345655 57999999999999999999999986 5999865 45666 5899999999998
Q ss_pred eeecC
Q psy7904 83 DIKLP 87 (181)
Q Consensus 83 ~i~l~ 87 (181)
++.+.
T Consensus 164 ~g~~~ 168 (194)
T PRK10809 164 EGYAK 168 (194)
T ss_pred Eeeec
Confidence 76544
No 44
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=99.00 E-value=4.4e-09 Score=80.37 Aligned_cols=84 Identities=12% Similarity=0.046 Sum_probs=65.4
Q ss_pred cEEEEECCeEEEEEEEEEcCC-CCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHh-cCccEEEE--ccCc-chHHHHHh
Q psy7904 3 PLKLWCLGILWISICFRMFPT-QGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKK-HEIYHFLT--FAAK-DAIGYFTR 77 (181)
Q Consensus 3 ~lv~~~dg~VIG~i~~r~~~~-~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~-~gi~~llt--~Adn-~Ai~FYkK 77 (181)
.+++..+|++||++++..... ...+++.. +++|.+| +|||+.+|..+.+++.+ .++..+.. .++| .|++||+|
T Consensus 53 ~~~~~~~g~~vG~~~~~~~~~~~~~~~~g~-~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k 130 (156)
T TIGR03585 53 YWIVCQESRPIGVISFTDINLVHKSAFWGI-YANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEK 130 (156)
T ss_pred EEEEEECCEEEEEEEEEecChhhCeEEEEE-EeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHH
Confidence 356667899999999876542 34566654 4899999 99999999999999985 58887754 4455 58999999
Q ss_pred cCCeEeeecCc
Q psy7904 78 QGFTKDIKLPK 88 (181)
Q Consensus 78 ~GF~~~i~l~~ 88 (181)
+||+..+.++.
T Consensus 131 ~Gf~~~g~~~~ 141 (156)
T TIGR03585 131 FGFEREGVFRQ 141 (156)
T ss_pred cCCeEeeeehh
Confidence 99998766543
No 45
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.98 E-value=1.8e-09 Score=94.40 Aligned_cols=72 Identities=15% Similarity=0.103 Sum_probs=61.4
Q ss_pred CCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE-c---cCc-chHHHHHhcCCeE
Q psy7904 9 LGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT-F---AAK-DAIGYFTRQGFTK 82 (181)
Q Consensus 9 dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt-~---Adn-~Ai~FYkK~GF~~ 82 (181)
++.+||++.++.- .+.++|..++|+|++||+|+|+.||+++.+.|++.|+..+.. + .+| .|+.||+|+||+.
T Consensus 242 d~givG~~~~~~~--~~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~A~~fY~~~GF~~ 318 (320)
T TIGR01686 242 DSGIIGIFVFEKK--EGNLFIDDLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMPFLSFYEQIGFED 318 (320)
T ss_pred CCceEEEEEEEec--CCcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchHHHHHHHHcCCcc
Confidence 4679999988753 345789999999999999999999999999999999997643 2 345 6999999999985
No 46
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=98.98 E-value=3.6e-09 Score=86.25 Aligned_cols=79 Identities=19% Similarity=0.165 Sum_probs=67.0
Q ss_pred ccEEEEECCeEEEEEEEEEcCCC----CEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHh
Q psy7904 2 VPLKLWCLGILWISICFRMFPTQ----GFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTR 77 (181)
Q Consensus 2 ~~lv~~~dg~VIG~i~~r~~~~~----~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK 77 (181)
+.||+.++|+|||.+-+.++.-. ...-+.-+||+|++||||+|+.||.+.++.++..|..-+++..| ..||.+
T Consensus 47 LslVA~d~g~vvG~Il~s~v~~~g~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~~~G~~~v~vlGd---p~YY~r 123 (171)
T COG3153 47 LSLVAEDDGEVVGHILFSPVTVGGEELGWLGLAPLAVDPEYQGQGIGSALVREGLEALRLAGASAVVVLGD---PTYYSR 123 (171)
T ss_pred eeEEEeeCCEEEEEEEEeEEEecCcccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHHHCCCCEEEEecC---cccccc
Confidence 46889999999999999875421 33457779999999999999999999999999999998877643 679999
Q ss_pred cCCeEe
Q psy7904 78 QGFTKD 83 (181)
Q Consensus 78 ~GF~~~ 83 (181)
+||+..
T Consensus 124 fGF~~~ 129 (171)
T COG3153 124 FGFEPA 129 (171)
T ss_pred cCcEEc
Confidence 999874
No 47
>PRK01346 hypothetical protein; Provisional
Probab=98.97 E-value=4.9e-09 Score=93.60 Aligned_cols=78 Identities=12% Similarity=-0.050 Sum_probs=64.1
Q ss_pred EEEEECCeEEEEEEEEEcC-----CC--CEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHH
Q psy7904 4 LKLWCLGILWISICFRMFP-----TQ--GFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFT 76 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~-----~~--~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYk 76 (181)
+++.++|+++|++.+.++. .. ....|..++|+|++||+|+|+.||+++++.+++.|...+...+.+ .+||+
T Consensus 50 ~va~~~~~lvg~~~~~~~~~~~~~~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~~--~~~Y~ 127 (411)
T PRK01346 50 LGAFDGDEVVGTAGAFDLRLTVPGGAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTASE--GGIYG 127 (411)
T ss_pred EEEEECCEEEEEEEEeccccccCCCCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECCc--hhhHh
Confidence 5677789999999876543 11 357899999999999999999999999999999998876665543 47999
Q ss_pred hcCCeEe
Q psy7904 77 RQGFTKD 83 (181)
Q Consensus 77 K~GF~~~ 83 (181)
|+||...
T Consensus 128 r~Gf~~~ 134 (411)
T PRK01346 128 RFGYGPA 134 (411)
T ss_pred hCCCeec
Confidence 9999763
No 48
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=98.86 E-value=3.3e-08 Score=73.83 Aligned_cols=71 Identities=17% Similarity=0.252 Sum_probs=57.7
Q ss_pred CeEEEEEEEEEc-CCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHH-HhcCccEEEE--ccCc-chHHHHHhcCCe
Q psy7904 10 GILWISICFRMF-PTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYH-KKHEIYHFLT--FAAK-DAIGYFTRQGFT 81 (181)
Q Consensus 10 g~VIG~i~~r~~-~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~a-k~~gi~~llt--~Adn-~Ai~FYkK~GF~ 81 (181)
+++||.+.+... ...+.+|+. +.|.|++||+|||+.++..+.+++ ...|+..+.. .++| .+..+++|.||+
T Consensus 67 ~~~iG~i~~~~~~~~~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~k~GF~ 142 (142)
T PF13302_consen 67 GEIIGFIGLYNIDKNNNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLEKLGFE 142 (142)
T ss_dssp TEEEEEEEEEEEETTTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHHHTT-E
T ss_pred CceEEEeeeeecccCCCccccc-cchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHHHcCCC
Confidence 479999999543 345688988 569999999999999999999999 5789998754 5666 479999999995
No 49
>KOG3396|consensus
Probab=98.84 E-value=1e-08 Score=81.10 Aligned_cols=81 Identities=9% Similarity=0.087 Sum_probs=65.2
Q ss_pred cEEEEE--CCeEEEEEEEEEcC---C--CCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHH
Q psy7904 3 PLKLWC--LGILWISICFRMFP---T--QGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYF 75 (181)
Q Consensus 3 ~lv~~~--dg~VIG~i~~r~~~---~--~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FY 75 (181)
+.|+++ .++|||.+++-.-. . ..-..|..+.|++++|||++|+.|+..|.+.+++.|+..+...-+..-++||
T Consensus 55 i~Vied~~s~~vigtatL~IE~KfIh~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv~FY 134 (150)
T KOG3396|consen 55 IVVIEDKESEKVIGTATLFIERKFIHGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNVKFY 134 (150)
T ss_pred EEEEEeCCcCeEEEEEEEEEehhhhhcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhhhhHH
Confidence 445554 37899999985421 1 0124678899999999999999999999999999999998776667779999
Q ss_pred HhcCCeEe
Q psy7904 76 TRQGFTKD 83 (181)
Q Consensus 76 kK~GF~~~ 83 (181)
+|+||+..
T Consensus 135 eKcG~s~~ 142 (150)
T KOG3396|consen 135 EKCGYSNA 142 (150)
T ss_pred HHcCcccc
Confidence 99999874
No 50
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=98.84 E-value=2.4e-08 Score=72.06 Aligned_cols=57 Identities=18% Similarity=0.121 Sum_probs=46.8
Q ss_pred EEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEE-EEccCc-chHHHHHhcCCeEe
Q psy7904 27 TEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHF-LTFAAK-DAIGYFTRQGFTKD 83 (181)
Q Consensus 27 ~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~l-lt~Adn-~Ai~FYkK~GF~~~ 83 (181)
.+|..+.+.|++||+|+|+.|+.++.+.+.+.|..-+ .+..+| .|+.+|+|.||+..
T Consensus 22 g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~~~l~v~~~N~~s~~ly~klGf~~~ 80 (86)
T PF08445_consen 22 GEIGGVYTLPEHRRRGLGSALVAALARELLERGKTPFLYVDADNEASIRLYEKLGFREI 80 (86)
T ss_dssp CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSEEEEEEETT-HHHHHHHHHCT-EEE
T ss_pred cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHcCCEEE
Confidence 6799999999999999999999999999988887754 445555 68999999999874
No 51
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.82 E-value=5.2e-08 Score=61.22 Aligned_cols=62 Identities=13% Similarity=-0.092 Sum_probs=52.4
Q ss_pred EEEEECCeEEEEEEEEEcCC-CCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE
Q psy7904 4 LKLWCLGILWISICFRMFPT-QGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT 65 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~-~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt 65 (181)
+++..+++++|.+.+.+... ...+++..++|+|++||+|+|+.||+++.+++.+.++.++..
T Consensus 2 ~~~~~~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 64 (65)
T cd04301 2 LVAEDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64 (65)
T ss_pred EEEecCCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence 45567899999999887442 356889989999999999999999999999999988887753
No 52
>KOG2488|consensus
Probab=98.81 E-value=2e-08 Score=83.24 Aligned_cols=85 Identities=20% Similarity=0.340 Sum_probs=65.2
Q ss_pred EEEEECC-eEEEEEEEEEcCCCC--EEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEE--EEccCc-chHHHHHh
Q psy7904 4 LKLWCLG-ILWISICFRMFPTQG--FTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHF--LTFAAK-DAIGYFTR 77 (181)
Q Consensus 4 lv~~~dg-~VIG~i~~r~~~~~~--~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~l--lt~Adn-~Ai~FYkK 77 (181)
+++..++ .++|+..||.-.+.+ .+.+-.+-|.+.+||+|||+.||+++...+.......+ .++.+| .|++||++
T Consensus 95 i~a~~~~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~al~Fy~~ 174 (202)
T KOG2488|consen 95 ICAWNNKSKLVGFTMFRFTVDTGDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLADSRHMRKVMLTVFSENIRALGFYHR 174 (202)
T ss_pred EEEEcCCCceeeEEEEEEEcccCCeEEEEEEEeehhhhhccChHHHHHHHHHHHHHHHHhhhheeeeecccchhHHHHHH
Confidence 3444444 799999998755555 44555577999999999999999999999987766643 346666 69999999
Q ss_pred cCCeEeeecCc
Q psy7904 78 QGFTKDIKLPK 88 (181)
Q Consensus 78 ~GF~~~i~l~~ 88 (181)
.||.+..+-|.
T Consensus 175 ~gf~~~~~sp~ 185 (202)
T KOG2488|consen 175 LGFVVDEESPC 185 (202)
T ss_pred cCcccCCCCCc
Confidence 99988655554
No 53
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.78 E-value=3.8e-08 Score=92.19 Aligned_cols=76 Identities=14% Similarity=0.139 Sum_probs=60.2
Q ss_pred CCeEEEEEEEEEcCCC-------CEEEEEEEE-----------eCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcc
Q psy7904 9 LGILWISICFRMFPTQ-------GFTEIVFCA-----------VNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKD 70 (181)
Q Consensus 9 dg~VIG~i~~r~~~~~-------~~~EI~~~A-----------V~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~ 70 (181)
++.++|++.++.-.+. +.+-|..+. +++++||+|||++||+++++.|++.|+..+.+.++..
T Consensus 422 ~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~G~~~i~v~s~~~ 501 (522)
T TIGR01211 422 NDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEEGSEKILVISGIG 501 (522)
T ss_pred CCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHCCCCEEEEeeCch
Confidence 4689999999853221 112233333 3589999999999999999999999999998877788
Q ss_pred hHHHHHhcCCeEee
Q psy7904 71 AIGYFTRQGFTKDI 84 (181)
Q Consensus 71 Ai~FYkK~GF~~~i 84 (181)
|.+||+|+||...+
T Consensus 502 A~~FY~klGf~~~g 515 (522)
T TIGR01211 502 VREYYRKLGYELDG 515 (522)
T ss_pred HHHHHHHCCCEEEc
Confidence 99999999998853
No 54
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.68 E-value=1.9e-07 Score=66.54 Aligned_cols=70 Identities=17% Similarity=0.200 Sum_probs=56.0
Q ss_pred EEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhc
Q psy7904 5 KLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQ 78 (181)
Q Consensus 5 v~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~ 78 (181)
.+..+|+.+|.+.|+. +.+...|....|.|++||+|+|+.||+++.++|+++|.+-.-+. .+|..|++|+
T Consensus 3 ~~~~~g~~~a~l~Y~~--~~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~kv~p~C--~y~~~~~~~h 72 (78)
T PF14542_consen 3 ELKDDGEEIAELTYRE--DGGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLKVVPTC--SYVAKYFRRH 72 (78)
T ss_dssp EEESSTTEEEEEEEEE--SSSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-EEEETS--HHHHHHHHH-
T ss_pred EEEECCEEEEEEEEEe--CCCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCEEEEEC--HHHHHHHHhC
Confidence 3455788999999987 45678899999999999999999999999999999988766433 3677888774
No 55
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=98.59 E-value=6e-07 Score=69.00 Aligned_cols=79 Identities=19% Similarity=0.231 Sum_probs=64.0
Q ss_pred CeEEEEEEEEEcC---CCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHh-cCccEEEE--ccCcc-hHHHHHhcCCeE
Q psy7904 10 GILWISICFRMFP---TQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKK-HEIYHFLT--FAAKD-AIGYFTRQGFTK 82 (181)
Q Consensus 10 g~VIG~i~~r~~~---~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~-~gi~~llt--~Adn~-Ai~FYkK~GF~~ 82 (181)
+++||.+.+.... ..+.+||.. .++|++||+|||+..+..+.+++-. .++..+.. .++|. ++..++|.||+.
T Consensus 77 ~~~iG~~~~~~~~~~~~~~~~~ig~-~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek~Gf~~ 155 (187)
T COG1670 77 GELIGVIGLSDIDRAANGDLAEIGY-WLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEKLGFRL 155 (187)
T ss_pred CeEEEEEEEEEeccccccceEEEEE-EEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHHcCChh
Confidence 4899999998765 245677766 4799999999999999999999875 68877654 66664 699999999999
Q ss_pred eeecCcc
Q psy7904 83 DIKLPKH 89 (181)
Q Consensus 83 ~i~l~~~ 89 (181)
++.+...
T Consensus 156 eg~~~~~ 162 (187)
T COG1670 156 EGELRQH 162 (187)
T ss_pred hhhhhhc
Confidence 8766554
No 56
>KOG3216|consensus
Probab=98.58 E-value=4.9e-07 Score=72.78 Aligned_cols=75 Identities=11% Similarity=-0.058 Sum_probs=60.9
Q ss_pred CCeEEEEEEEEEcC----CCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEE--EEc-cCcchHHHHHhcCCe
Q psy7904 9 LGILWISICFRMFP----TQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHF--LTF-AAKDAIGYFTRQGFT 81 (181)
Q Consensus 9 dg~VIG~i~~r~~~----~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~l--lt~-Adn~Ai~FYkK~GF~ 81 (181)
++.++|.+-|-+.. ...-..+..++|.|.+||||+|+.|++.+-+.|.+.|+..+ .+- -+..|+.||+|.|.+
T Consensus 63 ~~~~aGf~~yf~~ystW~~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~lY~k~gaq 142 (163)
T KOG3216|consen 63 GEVVAGFALYFNNYSTWLGKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILLYEKVGAQ 142 (163)
T ss_pred CCceeEEeeeecccccccccceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchhHHHHHHHhCcc
Confidence 56889988876532 22456788999999999999999999999999999999865 333 344799999999997
Q ss_pred Ee
Q psy7904 82 KD 83 (181)
Q Consensus 82 ~~ 83 (181)
..
T Consensus 143 ~l 144 (163)
T KOG3216|consen 143 DL 144 (163)
T ss_pred cc
Confidence 63
No 57
>KOG3138|consensus
Probab=98.57 E-value=1.1e-07 Score=78.66 Aligned_cols=79 Identities=16% Similarity=0.235 Sum_probs=60.0
Q ss_pred CCeEEEEEEEEEcCC-CC--------EEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcC-ccEEE--E-ccCcchHHHH
Q psy7904 9 LGILWISICFRMFPT-QG--------FTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHE-IYHFL--T-FAAKDAIGYF 75 (181)
Q Consensus 9 dg~VIG~i~~r~~~~-~~--------~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~g-i~~ll--t-~Adn~Ai~FY 75 (181)
++..+|+.+.+.... ++ +..|..+.|.+.+|.+|+|+.||+++++++.... +..+. + -+++.|+.||
T Consensus 63 ~~~~v~a~~~k~~~~~~~~~r~~~~~~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y 142 (187)
T KOG3138|consen 63 NEIAVGAVACKLIKFVQNAKRLFGNRVIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFY 142 (187)
T ss_pred ccccccceeeeehhhhhhhhhhhccceeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHH
Confidence 445666666654321 11 4789999999999999999999999999998766 44332 2 3567899999
Q ss_pred HhcCCeEeeecC
Q psy7904 76 TRQGFTKDIKLP 87 (181)
Q Consensus 76 kK~GF~~~i~l~ 87 (181)
++.||+....++
T Consensus 143 ~~~gF~~~~~~~ 154 (187)
T KOG3138|consen 143 EKRGFEIVERLK 154 (187)
T ss_pred HhcCceEeeccc
Confidence 999999976554
No 58
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=98.57 E-value=2.2e-07 Score=74.17 Aligned_cols=79 Identities=18% Similarity=0.114 Sum_probs=63.5
Q ss_pred EEEEE-CCeEEEEEEEEEcCCCCEEE--EEEEEeCCCCccCCHHHHHHHHHHHHHHhcCc-cEEEEccCcchHHHHHhcC
Q psy7904 4 LKLWC-LGILWISICFRMFPTQGFTE--IVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEI-YHFLTFAAKDAIGYFTRQG 79 (181)
Q Consensus 4 lv~~~-dg~VIG~i~~r~~~~~~~~E--I~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi-~~llt~Adn~Ai~FYkK~G 79 (181)
|+++. +|++++++.+-+- +.++.+ |..++|+|+.||+|+|.+||..+++.+.+..- ..+...|......||..+|
T Consensus 52 l~~~~~~g~LvAyaRLl~~-~~~~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQahLq~fYa~~G 130 (155)
T COG2153 52 LLGWTPDGELVAYARLLPP-GAEYEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQAHLQDFYASFG 130 (155)
T ss_pred EEEEcCCCeEEEEEecCCC-CCCcCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehHHHHHHHHHHhC
Confidence 55666 8999998776542 233344 89999999999999999999999999987653 3466677778899999999
Q ss_pred CeEe
Q psy7904 80 FTKD 83 (181)
Q Consensus 80 F~~~ 83 (181)
|.+.
T Consensus 131 Fv~~ 134 (155)
T COG2153 131 FVRV 134 (155)
T ss_pred cEEc
Confidence 9885
No 59
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=98.50 E-value=5.2e-07 Score=78.00 Aligned_cols=80 Identities=14% Similarity=0.003 Sum_probs=65.3
Q ss_pred EEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEE-EEccCc-chHHHHHhcCCeE
Q psy7904 5 KLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHF-LTFAAK-DAIGYFTRQGFTK 82 (181)
Q Consensus 5 v~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~l-lt~Adn-~Ai~FYkK~GF~~ 82 (181)
.+..+|+||..+....-. ...++|.-++++|++|||||++.|+..|..-.-..|-... +.+++| .|...|+|.||+.
T Consensus 181 f~~~d~~iVa~A~t~a~~-~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~~~L~~~~~N~~A~~iY~riGF~~ 259 (268)
T COG3393 181 FLEGDGKIVAKAETAAEN-PAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKIPCLFVNSDNPVARRIYQRIGFRE 259 (268)
T ss_pred EEccCCcEEEeeeccccC-CcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCeeEEEEecCCHHHHHHHHHhCCee
Confidence 344567999988876533 3578999999999999999999999999988888887764 556777 5899999999998
Q ss_pred eee
Q psy7904 83 DIK 85 (181)
Q Consensus 83 ~i~ 85 (181)
.++
T Consensus 260 ~g~ 262 (268)
T COG3393 260 IGE 262 (268)
T ss_pred cce
Confidence 643
No 60
>KOG3397|consensus
Probab=98.49 E-value=2.9e-07 Score=75.91 Aligned_cols=73 Identities=12% Similarity=0.232 Sum_probs=59.4
Q ss_pred CCeEEEEEEEEEcCCCC-EEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeE
Q psy7904 9 LGILWISICFRMFPTQG-FTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTK 82 (181)
Q Consensus 9 dg~VIG~i~~r~~~~~~-~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~ 82 (181)
..+|||-..+.+..++. -.-+..+.|+.++||+|+|+.||+.++++++..|+..+...++ ...+||++.||+.
T Consensus 65 ~~~VigH~rLS~i~n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~-DQ~~FYe~lGYe~ 138 (225)
T KOG3397|consen 65 NDEVLGHSRLSHLPNRDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTD-DQCRFYESLGYEK 138 (225)
T ss_pred ccceeeeeccccCCCCCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhhheeeecc-cchhhhhhhcccc
Confidence 35899999998877653 2334457799999999999999999999999999887755433 4589999999987
No 61
>KOG3234|consensus
Probab=98.28 E-value=2.7e-06 Score=68.88 Aligned_cols=80 Identities=14% Similarity=0.170 Sum_probs=61.3
Q ss_pred CCeEEEEEEEEEcCCC--CEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccE--EEEccCc-chHHHHHhcCCeEe
Q psy7904 9 LGILWISICFRMFPTQ--GFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYH--FLTFAAK-DAIGYFTRQGFTKD 83 (181)
Q Consensus 9 dg~VIG~i~~r~~~~~--~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~--llt~Adn-~Ai~FYkK~GF~~~ 83 (181)
.|++-|++--+..... -.+++.-++|+|++|+.|+|+.||+.+++.....+.-. +++.++| .||++|+|.|+++-
T Consensus 50 ~~~imgyimgk~Eg~~~~wh~HvTAltVap~~Rrl~la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~mYkkLGY~~Y 129 (173)
T KOG3234|consen 50 TGEIMGYIMGKVEGKDTEWHGHVTALTVAPDYRRLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKKLGYSVY 129 (173)
T ss_pred CCceEEEEeeeccccCcceeeEEEEEEechhHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeccchhHHHHHHhcCceEE
Confidence 3678888877543221 24678889999999999999999999999998775554 3445555 59999999999886
Q ss_pred eecCc
Q psy7904 84 IKLPK 88 (181)
Q Consensus 84 i~l~~ 88 (181)
.++..
T Consensus 130 R~Vi~ 134 (173)
T KOG3234|consen 130 RTVIE 134 (173)
T ss_pred Eeeee
Confidence 55543
No 62
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=98.19 E-value=1.7e-05 Score=69.98 Aligned_cols=86 Identities=15% Similarity=0.152 Sum_probs=70.3
Q ss_pred EEEEC-CeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeEe
Q psy7904 5 KLWCL-GILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTKD 83 (181)
Q Consensus 5 v~~~d-g~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~~ 83 (181)
++..+ ++||++.++. .+ -|.-+||+++.||-|+.-+|+.+|.+++-+.|..|++.|+-+.-..||+-+||..-
T Consensus 40 ~~~~~~~~iiacGsia---Gn---vikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp~~~~lFk~~GF~~i 113 (352)
T COG3053 40 AIYRDNEEIIACGSIA---GN---VIKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKPEYAALFKQCGFSEI 113 (352)
T ss_pred EEEcCCCcEEEecccc---cc---eeEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEechhHHHHHHhCCceEe
Confidence 34444 8899877763 12 37779999999999999999999999999999999999998888999999999875
Q ss_pred eecCcccccCccccCCCceeEeee
Q psy7904 84 IKLPKHLYEGYIKDYEDAMLMHCE 107 (181)
Q Consensus 84 i~l~~~~~~gyikdYega~LMec~ 107 (181)
...+. ...|||..
T Consensus 114 ~~~~~-----------~ivlmENs 126 (352)
T COG3053 114 ASAEN-----------VIVLMENS 126 (352)
T ss_pred eccCc-----------eEEEeecC
Confidence 54442 34678875
No 63
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=98.17 E-value=6.4e-06 Score=68.59 Aligned_cols=56 Identities=25% Similarity=0.537 Sum_probs=40.2
Q ss_pred EEEEEEEeCCCCccCCHHHHHHHHHHHHH-------------------------HhcCccEEEE-cc-CcchHHHHHhcC
Q psy7904 27 TEIVFCAVNCSVQVLGYGTYMMNHLKEYH-------------------------KKHEIYHFLT-FA-AKDAIGYFTRQG 79 (181)
Q Consensus 27 ~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~a-------------------------k~~gi~~llt-~A-dn~Ai~FYkK~G 79 (181)
+-|+.|||+|++|++|||++|++.+++++ +..++..+=+ |. +..=..|++|+|
T Consensus 91 ~RIvRIAvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtSFG~t~~Ll~FW~k~g 170 (196)
T PF13718_consen 91 ARIVRIAVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTSFGATPELLKFWQKNG 170 (196)
T ss_dssp EEEEEEEE-CCC-SSSHHHHHHHHHHHT-----------------------------S-SEEEEEEE--HHHHHHHHCTT
T ss_pred eeEEEEEEChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEeccCCCHHHHHHHHHCC
Confidence 56999999999999999999999999999 4567777644 43 334589999999
Q ss_pred CeE
Q psy7904 80 FTK 82 (181)
Q Consensus 80 F~~ 82 (181)
|..
T Consensus 171 f~p 173 (196)
T PF13718_consen 171 FVP 173 (196)
T ss_dssp -EE
T ss_pred cEE
Confidence 977
No 64
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=98.16 E-value=2.5e-06 Score=56.29 Aligned_cols=44 Identities=20% Similarity=0.306 Sum_probs=39.6
Q ss_pred EEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCC
Q psy7904 32 CAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGF 80 (181)
Q Consensus 32 ~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF 80 (181)
++|+|++||+|+|+.|++++.++++..|+. .+..++.+|.+.||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~-----~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRGIS-----LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcCce-----ehHHHHHHHHhcCC
Confidence 899999999999999999999999997776 34468999999998
No 65
>KOG3235|consensus
Probab=98.08 E-value=1.5e-05 Score=64.91 Aligned_cols=100 Identities=20% Similarity=0.127 Sum_probs=71.7
Q ss_pred ccEEEE-ECCeEEEEEEEEEcC----CCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHh-cCccE--EEEccCc-chH
Q psy7904 2 VPLKLW-CLGILWISICFRMFP----TQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKK-HEIYH--FLTFAAK-DAI 72 (181)
Q Consensus 2 ~~lv~~-~dg~VIG~i~~r~~~----~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~-~gi~~--llt~Adn-~Ai 72 (181)
..+|+. .+|+|||+.-...+. +....+|..+||.-++|+.|+|++||+....-..+ .+..+ +.+..+| .|+
T Consensus 42 lSyVA~D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~rs~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl 121 (193)
T KOG3235|consen 42 LSYVAEDENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKRSYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAAL 121 (193)
T ss_pred ceEEEEcCCCcEEEEeeeehhhcccCCCCCCeeEEeeehhhHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHH
Confidence 357777 468999998877665 23467899999999999999999999986554443 34444 4456666 589
Q ss_pred HHHH-hcCCeEeeecCcccccCccccCCCceeEee
Q psy7904 73 GYFT-RQGFTKDIKLPKHLYEGYIKDYEDAMLMHC 106 (181)
Q Consensus 73 ~FYk-K~GF~~~i~l~~~~~~gyikdYega~LMec 106 (181)
.+|+ ..||... +..+ -|..|-|+|.-|..
T Consensus 122 ~LY~~tl~F~v~-eve~----kYYadGedAyaM~~ 151 (193)
T KOG3235|consen 122 HLYKNTLGFVVC-EVEP----KYYADGEDAYAMRK 151 (193)
T ss_pred HhhhhccceEEe-eccc----ccccccHHHHHHHH
Confidence 9999 9999874 4443 34445566654543
No 66
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=98.06 E-value=5.3e-05 Score=65.73 Aligned_cols=79 Identities=13% Similarity=0.035 Sum_probs=59.8
Q ss_pred EEEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeEe
Q psy7904 4 LKLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTKD 83 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~~ 83 (181)
++++.+|+||++|+-... .++.+||. ++++|++||||+++.+..+++.+|.++|+.=.|...+...+.+=+|.||+-.
T Consensus 168 f~i~~~~~iVs~~~s~~~-~~~~~EI~-I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P~WDc~N~~S~~lA~kLGf~~~ 245 (265)
T PF12746_consen 168 FCILHDGEIVSGCSSYFV-YENGIEID-IETHPEYRGKGLATAVAAAFILECLENGLYPSWDCHNLASIALAEKLGFHFD 245 (265)
T ss_dssp EEEEETTEEEEEEEEEEE-ETTEEEEE-EEE-CCCTTSSHHHHHHHHHHHHHHHTT-EEE-EESSHHHHHHHHHCT--EE
T ss_pred EEEEECCEEEEEEEEEEE-ECCEEEEE-EEECHHhhcCCHHHHHHHHHHHHHHHCCCCcCeeCCCHHHHHHHHHcCCccc
Confidence 678889999977654332 24568864 6899999999999999999999999999987776555567999999999885
Q ss_pred e
Q psy7904 84 I 84 (181)
Q Consensus 84 i 84 (181)
.
T Consensus 246 ~ 246 (265)
T PF12746_consen 246 F 246 (265)
T ss_dssp E
T ss_pred c
Confidence 4
No 67
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=98.03 E-value=1.1e-05 Score=65.95 Aligned_cols=80 Identities=18% Similarity=-0.001 Sum_probs=60.1
Q ss_pred cEEEEE-CCeEEEEEEEEEcCCCC----EEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEc--cCcch-HHH
Q psy7904 3 PLKLWC-LGILWISICFRMFPTQG----FTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTF--AAKDA-IGY 74 (181)
Q Consensus 3 ~lv~~~-dg~VIG~i~~r~~~~~~----~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~--Adn~A-i~F 74 (181)
+++++. ||++||.+.+|---++. -.+|-. .|.|++||||||+.++.-..+.|++.|+..+++. .+|.| -.-
T Consensus 70 ~y~~v~~d~~ivG~i~lRh~Ln~~ll~~gGHIGY-~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkv 148 (174)
T COG3981 70 TYWAVDEDGQIVGFINLRHQLNDFLLEEGGHIGY-SVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKV 148 (174)
T ss_pred eEEEEecCCcEEEEEEeeeecchHHHhcCCcccc-eeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHH
Confidence 466666 59999999998532221 124544 7999999999999999999999999999997653 35544 667
Q ss_pred HHhcCCeEe
Q psy7904 75 FTRQGFTKD 83 (181)
Q Consensus 75 YkK~GF~~~ 83 (181)
-+++|=..+
T Consensus 149 I~~NGGile 157 (174)
T COG3981 149 IEANGGILE 157 (174)
T ss_pred HHhcCCEEe
Confidence 777775443
No 68
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=97.73 E-value=4e-05 Score=74.67 Aligned_cols=56 Identities=23% Similarity=0.353 Sum_probs=46.5
Q ss_pred EEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE-c-cCcchHHHHHhcCCeEe
Q psy7904 27 TEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT-F-AAKDAIGYFTRQGFTKD 83 (181)
Q Consensus 27 ~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt-~-Adn~Ai~FYkK~GF~~~ 83 (181)
.-|+.|||+|+.|++||||+|++++.++++ .++..+=+ + ++..=..|+.|+||...
T Consensus 532 ~RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~DwlgvsFG~t~~L~rFW~rnGF~pV 589 (758)
T COG1444 532 WRIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVSFGYTEELLRFWLRNGFVPV 589 (758)
T ss_pred eeEEEEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEeeccCCCHHHHHHHHHcCeEEE
Confidence 359999999999999999999999999997 45666643 4 34456999999999874
No 69
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=97.58 E-value=0.00024 Score=53.34 Aligned_cols=58 Identities=10% Similarity=-0.041 Sum_probs=48.3
Q ss_pred EEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEE
Q psy7904 5 KLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHF 63 (181)
Q Consensus 5 v~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~l 63 (181)
++..+|+.+|.+++.... .+..-|..-.|++++||||+|+.|+.++.+.|++.|..-+
T Consensus 19 ~~~~~G~~~~e~~y~~~~-~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~kii 76 (99)
T COG2388 19 VLTDEGEVIGEATYYDRG-ENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKII 76 (99)
T ss_pred EEecCCcEEEEEEEecCC-CCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCeEc
Confidence 455678899999987644 2456778888999999999999999999999999887654
No 70
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=97.49 E-value=0.0018 Score=50.73 Aligned_cols=76 Identities=13% Similarity=0.156 Sum_probs=52.8
Q ss_pred EEEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccC-cc------hHHHHH
Q psy7904 4 LKLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAA-KD------AIGYFT 76 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Ad-n~------Ai~FYk 76 (181)
+++.-|+.++|.+-+..- ...+++..++|.+.-|++|+|+.|++.+...+ .++.++....+ .. --+|.+
T Consensus 41 ~aArFNdRlLgAv~v~~~--~~~~~L~~l~VRevTRrRGVG~yLlee~~rq~--p~i~~w~l~~~~~~~~~~~~~~~Fm~ 116 (128)
T PF12568_consen 41 FAARFNDRLLGAVKVTIS--GQQAELSDLCVREVTRRRGVGLYLLEEVLRQL--PDIKHWWLADEGVEPQDRAVMAAFMQ 116 (128)
T ss_dssp EEEEETTEEEEEEEEEEE--TTEEEEEEEEE-TT-SSSSHHHHHHHHHHHHS---S--EEEE--TT-S--THHHHHHHHH
T ss_pred EEEEechheeeeEEEEEc--CcceEEeeEEEeeccccccHHHHHHHHHHHHC--CCCcEEEEecCCCcccchHHHHHHHH
Confidence 344458999998888763 34689999999999999999999999998877 46777655322 11 258999
Q ss_pred hcCCeEe
Q psy7904 77 RQGFTKD 83 (181)
Q Consensus 77 K~GF~~~ 83 (181)
.+||+..
T Consensus 117 a~GF~~~ 123 (128)
T PF12568_consen 117 ACGFSAQ 123 (128)
T ss_dssp HHT-EE-
T ss_pred HcCcccc
Confidence 9999764
No 71
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=97.47 E-value=0.00021 Score=64.46 Aligned_cols=79 Identities=11% Similarity=-0.006 Sum_probs=61.8
Q ss_pred cEEEEECCeEEEEEEEEEcC----CC--CEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHH
Q psy7904 3 PLKLWCLGILWISICFRMFP----TQ--GFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFT 76 (181)
Q Consensus 3 ~lv~~~dg~VIG~i~~r~~~----~~--~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYk 76 (181)
++++..+.++++....-+|. ++ ..+-|..+|+.|++||+|+-++||.|.....++.|+.-...+. ...+||+
T Consensus 41 ~~vi~~nqkl~s~L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L~P--~s~~iYr 118 (389)
T COG4552 41 SYVIYMNQKLASRLHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSALHP--FSGGIYR 118 (389)
T ss_pred ceEEeehhhhhhcccccchheeeCCeeeeccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEecc--CchhhHh
Confidence 45677777888777665432 22 1345999999999999999999999999999999998765542 4589999
Q ss_pred hcCCeEe
Q psy7904 77 RQGFTKD 83 (181)
Q Consensus 77 K~GF~~~ 83 (181)
|.||...
T Consensus 119 KfGye~a 125 (389)
T COG4552 119 KFGYEYA 125 (389)
T ss_pred hcccccc
Confidence 9999663
No 72
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=97.05 E-value=0.0018 Score=47.78 Aligned_cols=69 Identities=14% Similarity=0.010 Sum_probs=57.4
Q ss_pred CCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEE-EEccCc-chHHHHHhcCCeE
Q psy7904 9 LGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHF-LTFAAK-DAIGYFTRQGFTK 82 (181)
Q Consensus 9 dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~l-lt~Adn-~Ai~FYkK~GF~~ 82 (181)
+|.+|.++... .+.|+.--+..|++||||+.+.++.++.+++.+.|+.-. .+..+| ......++.||..
T Consensus 7 eG~PVSW~lmd-----qtge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P~Y~hv~~~N~~~~r~~~~lg~~~ 77 (89)
T PF08444_consen 7 EGNPVSWSLMD-----QTGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFPFYGHVDEDNEASQRLSKSLGFIF 77 (89)
T ss_pred CCCEeEEEEec-----ccccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCCeEeehHhccHHHHHHHHHCCCee
Confidence 68888877652 357888889999999999999999999999999999864 333444 5799999999976
No 73
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=96.89 E-value=0.029 Score=45.94 Aligned_cols=80 Identities=11% Similarity=0.003 Sum_probs=61.4
Q ss_pred EEEEECCeEEEEEEEEEcCC--------------------CCEEEEEEEEeCCCCcc------CCHHHHHHHHHHHHHHh
Q psy7904 4 LKLWCLGILWISICFRMFPT--------------------QGFTEIVFCAVNCSVQV------LGYGTYMMNHLKEYHKK 57 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~--------------------~~~~EI~~~AV~~~~Qg------KG~Gs~Lm~~l~~~ak~ 57 (181)
+++..+|+|+|++.+.|... ....|+..++|+++..+ .-+...|+..+.++|.+
T Consensus 48 lv~~~~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~ 127 (182)
T PF00765_consen 48 LVALDDGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALS 127 (182)
T ss_dssp EEEEETTEEEEEEEEEETTS--HHHHCTGGGHTTS---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHC
T ss_pred EEEEECCEEEEEeeeccCCCcchhhhHHHHHhCCCCCCCCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHH
Confidence 45567899999988865211 24689999999998432 24678999999999999
Q ss_pred cCccEEEEccCcchHHHHHhcCCeEe
Q psy7904 58 HEIYHFLTFAAKDAIGYFTRQGFTKD 83 (181)
Q Consensus 58 ~gi~~llt~Adn~Ai~FYkK~GF~~~ 83 (181)
+|+.++++-.+..-..++++.||..+
T Consensus 128 ~gi~~~v~V~~~~~~r~l~r~G~~~~ 153 (182)
T PF00765_consen 128 NGIRHIVGVVDPAMERILRRAGWPVR 153 (182)
T ss_dssp TT-SEEEEEEEHHHHHHHHHCT-EEE
T ss_pred CCCCEEEEEEChHHHHHHHHcCCceE
Confidence 99999998777777999999999774
No 74
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=96.84 E-value=0.0014 Score=61.07 Aligned_cols=49 Identities=16% Similarity=0.301 Sum_probs=45.1
Q ss_pred CCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeEee
Q psy7904 36 CSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTKDI 84 (181)
Q Consensus 36 ~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~~i 84 (181)
..+|.+|||+.||++++..|++.+...+.+-+...+..||+|.||...+
T Consensus 460 ~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSgiG~ReYy~k~GY~~~g 508 (515)
T COG1243 460 DEWQHRGYGRELLEEAERIAREEGAKKILVISGIGVREYYRKLGYELDG 508 (515)
T ss_pred chhhcccHHHHHHHHHHHHHHhhccccEEEEecccHHHHHHHhCccccC
Confidence 5699999999999999999999998889888888999999999999864
No 75
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=96.80 E-value=0.013 Score=49.85 Aligned_cols=59 Identities=15% Similarity=0.119 Sum_probs=49.9
Q ss_pred CEEEEEEEEeCCCCccC--------C--------------------HHHHHHHHHHHHHHhcCccEEEEccCcchHHHHH
Q psy7904 25 GFTEIVFCAVNCSVQVL--------G--------------------YGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFT 76 (181)
Q Consensus 25 ~~~EI~~~AV~~~~QgK--------G--------------------~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYk 76 (181)
..+|+..+||++++|+. | +...|+..+.++|.++|+.++++-++..-...++
T Consensus 110 ~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~~l~r~l~ 189 (241)
T TIGR03694 110 RIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALSSANGITHWYAIMEPRLARLLS 189 (241)
T ss_pred ceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHHHHCCCcEEEEEeCHHHHHHHH
Confidence 47899999999998863 2 4567999999999999999998877777778999
Q ss_pred hcCCeEe
Q psy7904 77 RQGFTKD 83 (181)
Q Consensus 77 K~GF~~~ 83 (181)
+.|+...
T Consensus 190 r~G~~~~ 196 (241)
T TIGR03694 190 RFGIQFR 196 (241)
T ss_pred HhCCceE
Confidence 9999663
No 76
>KOG4135|consensus
Probab=96.73 E-value=0.0043 Score=50.36 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=45.3
Q ss_pred EEEEEEEeCCCCccCCHHHHHHHHHHHHHHh-cCccEEEE--ccCc-chHHHHHhcCCeEe
Q psy7904 27 TEIVFCAVNCSVQVLGYGTYMMNHLKEYHKK-HEIYHFLT--FAAK-DAIGYFTRQGFTKD 83 (181)
Q Consensus 27 ~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~-~gi~~llt--~Adn-~Ai~FYkK~GF~~~ 83 (181)
+|+.-+--.|.-||||||+..+..++.|+.+ .++..+.. ..+| ..+.||+|++|+..
T Consensus 108 gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~ 168 (185)
T KOG4135|consen 108 GEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKKFLFTQV 168 (185)
T ss_pred eeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHHhhheee
Confidence 4555565789999999999999999999985 46666544 4455 46999999999874
No 77
>KOG4144|consensus
Probab=96.52 E-value=0.0021 Score=52.35 Aligned_cols=76 Identities=13% Similarity=0.098 Sum_probs=53.3
Q ss_pred CCeEEEEEEEEEcCCC--------------CEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCcc-EEEEccCcchHH
Q psy7904 9 LGILWISICFRMFPTQ--------------GFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIY-HFLTFAAKDAIG 73 (181)
Q Consensus 9 dg~VIG~i~~r~~~~~--------------~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~-~llt~Adn~Ai~ 73 (181)
++.+||.+.-..++.. .-+.|..++|+|++|.+|+|+.|+..-++..-++.+. ....-+...-++
T Consensus 70 ~~tLIghIigs~~~~E~lt~ESm~kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~pLvP 149 (190)
T KOG4144|consen 70 EGTLIGHIIGSLWDKERLTQESMTKHRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHDPLVP 149 (190)
T ss_pred cccceehhhcccCcchhhhHHHHhhhhcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecCCccc
Confidence 5667776655433211 2367888999999999999999998866555544443 344445556799
Q ss_pred HHHhcCCeEee
Q psy7904 74 YFTRQGFTKDI 84 (181)
Q Consensus 74 FYkK~GF~~~i 84 (181)
||++.||...+
T Consensus 150 FYEr~gFk~vg 160 (190)
T KOG4144|consen 150 FYERFGFKAVG 160 (190)
T ss_pred hhHhcCceeec
Confidence 99999998753
No 78
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=96.44 E-value=0.016 Score=49.34 Aligned_cols=63 Identities=21% Similarity=0.343 Sum_probs=53.5
Q ss_pred CCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeEeeecCcccccCccccCCCceeEeeeec
Q psy7904 41 LGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTKDIKLPKHLYEGYIKDYEDAMLMHCEID 109 (181)
Q Consensus 41 KG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~~i~l~~~~~~gyikdYega~LMec~l~ 109 (181)
.|-...|+..+.+.|+++|+..+++.....+...|++.||..++.+| ||... ++|..|...+.
T Consensus 20 ~~~~~~~~~~~~~~a~~~~~~ki~~~~~~~~~~~~~~~g~~~e~~i~-----~~f~g-~~~~~~~~~~~ 82 (266)
T TIGR03827 20 GNDVEALIPDLDALAKKEGYTKIIAKVPGSDKPLFEERGYLEEAKIP-----GYFNG-HDAYFMSKYLD 82 (266)
T ss_pred CccHHHHHHHHHHHHHHcCCcEEEEEccHHHHHHHHHCCCeEEEecc-----cccCC-CceEEEEEcCc
Confidence 44578999999999999999999999888899999999999998887 55554 67888888543
No 79
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=96.24 E-value=0.024 Score=45.23 Aligned_cols=60 Identities=12% Similarity=0.043 Sum_probs=51.8
Q ss_pred CEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE--ccCc---chHHHHHhcCCeEee
Q psy7904 25 GFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT--FAAK---DAIGYFTRQGFTKDI 84 (181)
Q Consensus 25 ~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt--~Adn---~Ai~FYkK~GF~~~i 84 (181)
.|+.+..+.|.+..||.|.|+.|...+.++|+..|...+.+ ++|. .+..|--..||...+
T Consensus 83 ~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~DppnpasdaFHaalGF~eVG 147 (167)
T COG3818 83 NFFYVDRVVVASRARGRGVARALYADLFSYAELAGYPYLTCEVNLDPPNPASDAFHAALGFHEVG 147 (167)
T ss_pred ceEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCceEEEEecCCCCChHHHHHhhhcCceEcc
Confidence 47889999999999999999999999999999999998765 5554 257888999998853
No 80
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=96.23 E-value=0.042 Score=40.46 Aligned_cols=61 Identities=8% Similarity=-0.107 Sum_probs=49.8
Q ss_pred EEEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEc
Q psy7904 4 LKLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTF 66 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~ 66 (181)
+++..+|++||+...-. ..+.+.....+++|+++..+.|..|+.+++++|.++|+..+-..
T Consensus 74 ~~~~~~g~~va~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g 134 (142)
T PF13480_consen 74 FVLYDGGEPVAFALGFR--HGGTLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFG 134 (142)
T ss_pred EEEEECCEEEEEEEEEE--ECCEEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEEC
Confidence 45556899998876544 33567788899999999999999999999999999998877443
No 81
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=95.87 E-value=0.2 Score=41.73 Aligned_cols=93 Identities=15% Similarity=0.064 Sum_probs=65.6
Q ss_pred ECCeEEEEEEEEEc----------C----------CCCEEEEEEEEeCCCCc---cCC----HHHHHHHHHHHHHHhcCc
Q psy7904 8 CLGILWISICFRMF----------P----------TQGFTEIVFCAVNCSVQ---VLG----YGTYMMNHLKEYHKKHEI 60 (181)
Q Consensus 8 ~dg~VIG~i~~r~~----------~----------~~~~~EI~~~AV~~~~Q---gKG----~Gs~Lm~~l~~~ak~~gi 60 (181)
.+|+|+|+..+-+- + ..+.+|+..+||+++++ +.+ +...|+..+.+++..+|+
T Consensus 61 ~~g~vvG~~RLlptt~p~ml~~~fp~l~~~~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi 140 (207)
T PRK13834 61 DSGRVAGCARLLPAIGPTMLAQVFPQLLPAGRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGY 140 (207)
T ss_pred CCCeEEEEEecccCCCcchhhhhcHHhcCCCCCCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCC
Confidence 35799997766321 1 12478999999999842 222 557899999999999999
Q ss_pred cEEEEccCcchHHHHHhcCCeEeeecCcccccCccccCCCceeEeee
Q psy7904 61 YHFLTFAAKDAIGYFTRQGFTKDIKLPKHLYEGYIKDYEDAMLMHCE 107 (181)
Q Consensus 61 ~~llt~Adn~Ai~FYkK~GF~~~i~l~~~~~~gyikdYega~LMec~ 107 (181)
.++++-.+..-...+++.|+..+. + |--..+++...+-+.
T Consensus 141 ~~~~~v~~~~~~r~l~r~G~~~~~-l------G~~~~~g~~~~~a~~ 180 (207)
T PRK13834 141 TEIVTATDLRFERILARAGWPMQR-L------GEPKAIGNTMAVAGI 180 (207)
T ss_pred CEEEEEECHHHHHHHHHcCCCeEE-C------CCCEEECCeEEEEEE
Confidence 999876666567899999997642 1 333345555566664
No 82
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=95.75 E-value=0.06 Score=42.30 Aligned_cols=78 Identities=9% Similarity=-0.058 Sum_probs=53.1
Q ss_pred cEEEEECCeEEEEEEEEEcCC-C---CEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE-ccCcchHHHHHh
Q psy7904 3 PLKLWCLGILWISICFRMFPT-Q---GFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT-FAAKDAIGYFTR 77 (181)
Q Consensus 3 ~lv~~~dg~VIG~i~~r~~~~-~---~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt-~Adn~Ai~FYkK 77 (181)
|.++.-+|.+||++-....+. + ++ -+..+.+-..+||+|+|++....+...++ |.-.+.+ -.+.+|+.|+++
T Consensus 39 ~~~~~~~~~~igf~l~L~~~~~~~~iD~-~~~efFIi~k~~~~GvGR~aaK~If~~~~--g~w~Va~i~EN~PA~~fwK~ 115 (143)
T COG5628 39 AWLFRIGGLPVGFALVLDLAHSPTPIDR-AVAEFFIVRKHRRRGVGRAAAKAIFGSAW--GVWQVATVRENTPARAFWKR 115 (143)
T ss_pred eeEEEECCceeeeeeeecccCCCCcccc-cchheEeeehhhccchhHHHHHHHHHHhh--ceEEEEEeccCChhHHHHHh
Confidence 455667899999887643221 1 11 13335566789999999999888876554 5555544 455689999999
Q ss_pred cCCeEe
Q psy7904 78 QGFTKD 83 (181)
Q Consensus 78 ~GF~~~ 83 (181)
.-.+.-
T Consensus 116 ~~~t~~ 121 (143)
T COG5628 116 VAETYP 121 (143)
T ss_pred hhcccc
Confidence 877653
No 83
>KOG2535|consensus
Probab=95.70 E-value=0.013 Score=53.40 Aligned_cols=48 Identities=19% Similarity=0.378 Sum_probs=40.8
Q ss_pred CCccCCHHHHHHHHHHHHHH-hcCccEEEEccCcchHHHHHhcCCeEee
Q psy7904 37 SVQVLGYGTYMMNHLKEYHK-KHEIYHFLTFAAKDAIGYFTRQGFTKDI 84 (181)
Q Consensus 37 ~~QgKG~Gs~Lm~~l~~~ak-~~gi~~llt~Adn~Ai~FYkK~GF~~~i 84 (181)
.+|.+|+|+.||++++..|+ ++|-..+-+-+......||+|.||+.++
T Consensus 498 KfQHQG~GtLLmeEAERIAr~EHgS~KiavISGVGtR~YY~klGY~LdG 546 (554)
T KOG2535|consen 498 KFQHQGFGTLLMEEAERIAREEHGSGKIAVISGVGTRNYYRKLGYELDG 546 (554)
T ss_pred hhhhcchhhHHHHHHHHHHHHhcCCCceEEEeccchHHHHHhhCeeecC
Confidence 48999999999999999998 4677777666666778999999999864
No 84
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=95.56 E-value=0.019 Score=40.62 Aligned_cols=30 Identities=20% Similarity=0.118 Sum_probs=25.9
Q ss_pred EEEEEEEEeCCCCccCCHHHHHHHHHHHHH
Q psy7904 26 FTEIVFCAVNCSVQVLGYGTYMMNHLKEYH 55 (181)
Q Consensus 26 ~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~a 55 (181)
..-|..++|+|++|++||+++||+.+.+..
T Consensus 5 ~~GI~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 5 VCGISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred EEEeEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 356889999999999999999999877653
No 85
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=95.29 E-value=0.14 Score=42.34 Aligned_cols=78 Identities=8% Similarity=-0.021 Sum_probs=49.4
Q ss_pred EEEEC-CeEEEEEEEEEcC---C---CCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHh
Q psy7904 5 KLWCL-GILWISICFRMFP---T---QGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTR 77 (181)
Q Consensus 5 v~~~d-g~VIG~i~~r~~~---~---~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK 77 (181)
++.++ .+||++..+-.|. . ..+.-+.+.+++|++||+|+++.+-..+.+..+.. -......+...+..||+|
T Consensus 50 ~~~KgT~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~~-~~N~~~~~~~~~~~~w~k 128 (181)
T PF06852_consen 50 TCLKGTDRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELDSV-DDNSVAQGNVKMSNFWHK 128 (181)
T ss_pred EEEcCCCcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhccC-CCceeeecCHHHHHHHHH
Confidence 33443 5688887764433 1 23778899999999999999964444444444443 333444555566777766
Q ss_pred -cCCeEe
Q psy7904 78 -QGFTKD 83 (181)
Q Consensus 78 -~GF~~~ 83 (181)
+||...
T Consensus 129 ~~G~~~~ 135 (181)
T PF06852_consen 129 MFGFDDY 135 (181)
T ss_pred HhCCCCC
Confidence 687663
No 86
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=94.87 E-value=0.16 Score=37.91 Aligned_cols=68 Identities=12% Similarity=0.022 Sum_probs=45.7
Q ss_pred EEEEECCeEEEEEEEEEcC-CCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE-ccCcchHHHH
Q psy7904 4 LKLWCLGILWISICFRMFP-TQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT-FAAKDAIGYF 75 (181)
Q Consensus 4 lv~~~dg~VIG~i~~r~~~-~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt-~Adn~Ai~FY 75 (181)
+-++-++...|++.+.+-+ +.++..+..+||+++.||.|+|..|++.+++... .-+++ .++|....+|
T Consensus 11 ~~~y~~e~y~~~aIvt~~~~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d~~----~L~Wrsr~~n~~n~Wy 80 (99)
T cd04264 11 HAIYLSEGYNAAAIVTYEGVNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRDFP----KLFWRSRKTNPINPWY 80 (99)
T ss_pred eEEEEeCCceEEEEEeccCCCCCceEEEEEEEchhhhhcChHHHHHHHHHhhCC----ceEEEeCCCCcccceE
Confidence 3445566666766665422 2367899999999999999999999999886532 12333 4555544433
No 87
>COG5076 Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription]
Probab=94.74 E-value=0.011 Score=53.15 Aligned_cols=116 Identities=22% Similarity=0.253 Sum_probs=96.4
Q ss_pred CeEEEEEEEEEcC-CC----CEEEEEEEEeCCCCccCCHHHHHHHHHHH---HHHhcCccEEEEccCcchHHHHHhcCCe
Q psy7904 10 GILWISICFRMFP-TQ----GFTEIVFCAVNCSVQVLGYGTYMMNHLKE---YHKKHEIYHFLTFAAKDAIGYFTRQGFT 81 (181)
Q Consensus 10 g~VIG~i~~r~~~-~~----~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~---~ak~~gi~~llt~Adn~Ai~FYkK~GF~ 81 (181)
...+++.+..++. .. .+.++++++.+...+.+|.|+.++.+.++ ......+....+.+++.++..+.++++.
T Consensus 80 ~~~~~~~~~~p~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~i~~~~~~~~~ 159 (371)
T COG5076 80 LENVGGITYSPFEKNRPESLRFDEIVFLAIESVTPESGLGSLLMAHLKTSVKKRKTPKIEDELLYADNKAIAKFKKQLFL 159 (371)
T ss_pred hhcccCcccCCccccccccccccceeccccccccccccccccccccchHHHHhhcCCcccchhHHHHHHHHHHHHHHhhc
Confidence 4678888888765 22 36789999999999999999999999986 3334456667778889999999999999
Q ss_pred EeeecCcccccCccccCCCceeEeeeecccccceehHHHHHHHHH
Q psy7904 82 KDIKLPKHLYEGYIKDYEDAMLMHCEIDKRIVYTHFVSVTQSQKH 126 (181)
Q Consensus 82 ~~i~l~~~~~~gyikdYega~LMec~l~~~i~y~~~~~~i~~qk~ 126 (181)
..+.....+|.+.+..++.++.++|-..| |++..+..-|..++-
T Consensus 160 ~~~~~~s~~F~~~p~k~~~PdYy~iIk~P-m~L~~i~kkl~~~~Y 203 (371)
T COG5076 160 RDGRFLSSIFLGLPSKREYPDYYEIIKSP-MDLLTIQKKLKNGRY 203 (371)
T ss_pred ccccccccccccCCccccCCChheeecch-hhHHHHHHHHHhhhh
Confidence 98888888999999999999999999999 998888888875543
No 88
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=94.58 E-value=0.14 Score=38.24 Aligned_cols=67 Identities=15% Similarity=0.092 Sum_probs=43.7
Q ss_pred EEEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE-ccCcchHHHH
Q psy7904 5 KLWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT-FAAKDAIGYF 75 (181)
Q Consensus 5 v~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt-~Adn~Ai~FY 75 (181)
-++-++..=|++.+.+-+..+...+..+||+++.||.|+|..|++.+++...+ -+++ .++|....+|
T Consensus 13 ~~y~~e~y~~~aivt~~~~~~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~~~----L~Wrsr~~n~~n~Wy 80 (99)
T cd04265 13 TIYLSEGYNAAAIVTNEEVDGVPYLDKFAVSSSAQGEGTGEALWRRLRRDFPK----LFWRSRSTNPINPWY 80 (99)
T ss_pred EEEEeCCCcEEEEEeccCCCCceEEEEEEEchhhhhcChHHHHHHHHHhhCCc----eEEEeCCCCcccceE
Confidence 34445544455555442213678999999999999999999999998865431 2333 4555444433
No 89
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=93.63 E-value=0.28 Score=39.93 Aligned_cols=55 Identities=13% Similarity=0.040 Sum_probs=44.0
Q ss_pred CCeEEEEEEEEEcC----C--CCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEE
Q psy7904 9 LGILWISICFRMFP----T--QGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHF 63 (181)
Q Consensus 9 dg~VIG~i~~r~~~----~--~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~l 63 (181)
.+++||+|+--|.. + ...+||.|++|++..|.|+++-.|+.++...+...|+-+-
T Consensus 87 ~~kLvgfIsaip~~irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~gI~qA 147 (162)
T PF01233_consen 87 SKKLVGFISAIPATIRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQGIWQA 147 (162)
T ss_dssp TTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--EE
T ss_pred CCEEEEEEccceEEEEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcCceee
Confidence 58999999976532 1 1468999999999999999999999999999999998763
No 90
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=92.24 E-value=0.16 Score=39.40 Aligned_cols=47 Identities=17% Similarity=0.326 Sum_probs=31.4
Q ss_pred EEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccE-EEEccC--cchHHHHHhc
Q psy7904 29 IVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYH-FLTFAA--KDAIGYFTRQ 78 (181)
Q Consensus 29 I~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~-llt~Ad--n~Ai~FYkK~ 78 (181)
|..++|+++.|++|+|+.|.+++...- ++.- -+.+.. ..-.+|.+|+
T Consensus 49 vLDFyVhes~QR~G~Gk~LF~~ML~~e---~~~p~~~a~DrPS~Kll~Fl~Kh 98 (120)
T PF05301_consen 49 VLDFYVHESRQRRGYGKRLFDHMLQEE---NVSPHQLAIDRPSPKLLSFLKKH 98 (120)
T ss_pred eeeEEEEeceeccCchHHHHHHHHHHc---CCCcccceecCCcHHHHHHHHHh
Confidence 566899999999999999999987642 2221 122222 2347777764
No 91
>KOG2036|consensus
Probab=91.40 E-value=0.15 Score=50.15 Aligned_cols=31 Identities=32% Similarity=0.494 Sum_probs=28.5
Q ss_pred EEEEEEEeCCCCccCCHHHHHHHHHHHHHHh
Q psy7904 27 TEIVFCAVNCSVQVLGYGTYMMNHLKEYHKK 57 (181)
Q Consensus 27 ~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~ 57 (181)
+-|+.+||+|++|+.|||++-++-|.+|...
T Consensus 615 aRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG 645 (1011)
T KOG2036|consen 615 ARIVRIAVHPEYQKMGYGSRAVQLLTDYFEG 645 (1011)
T ss_pred ceEEEEEeccchhccCccHHHHHHHHHHHhc
Confidence 4699999999999999999999999998764
No 92
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.32 E-value=2.8 Score=35.49 Aligned_cols=77 Identities=16% Similarity=0.099 Sum_probs=60.2
Q ss_pred EECCeEEEEEEEEEcC--------------------CCCEEEEEEEEeCC--CCccCC----HHHHHHHHHHHHHHhcCc
Q psy7904 7 WCLGILWISICFRMFP--------------------TQGFTEIVFCAVNC--SVQVLG----YGTYMMNHLKEYHKKHEI 60 (181)
Q Consensus 7 ~~dg~VIG~i~~r~~~--------------------~~~~~EI~~~AV~~--~~QgKG----~Gs~Lm~~l~~~ak~~gi 60 (181)
..+|+|+|+..+-|.. +.++.|...+||++ +-+..| .+..|+.-+.+++.++|+
T Consensus 59 ~~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~G~ 138 (209)
T COG3916 59 TSDGRIVGCVRLLPTTGPYMLTDVFPALLEGGPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALARGI 138 (209)
T ss_pred cCCCcEEEEEEeccCCCcchhhhhhHHHhcCCCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHHcCC
Confidence 4578999988774411 12678999999997 333222 467899999999999999
Q ss_pred cEEEEccCcchHHHHHhcCCeEe
Q psy7904 61 YHFLTFAAKDAIGYFTRQGFTKD 83 (181)
Q Consensus 61 ~~llt~Adn~Ai~FYkK~GF~~~ 83 (181)
++++|-.+..-...+++.||..+
T Consensus 139 ~~IvtVt~~~meril~r~Gw~~~ 161 (209)
T COG3916 139 TGIVTVTDTGMERILRRAGWPLT 161 (209)
T ss_pred ceEEEEEchHHHHHHHHcCCCeE
Confidence 99999888888999999999764
No 93
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=88.92 E-value=0.33 Score=45.97 Aligned_cols=73 Identities=15% Similarity=0.114 Sum_probs=57.2
Q ss_pred CCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE-cc---Cc-chHHHHHhcCCeEe
Q psy7904 9 LGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT-FA---AK-DAIGYFTRQGFTKD 83 (181)
Q Consensus 9 dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt-~A---dn-~Ai~FYkK~GF~~~ 83 (181)
|+.+||.+.+.. ..+...|..+..+..-=|+++-++||+.+++.|...|+..+-. |- .| ....||+.+||..+
T Consensus 471 DnGiigvviv~k--k~~~w~IDt~lmSCRVlgRkvE~~l~~~~~e~A~~~gi~tir~~Y~pt~kN~pv~~FyE~mgf~l~ 548 (574)
T COG3882 471 DNGIIGVVIVEK--KESEWFIDTFLMSCRVLGRKVEQRLMNSLEEQALSEGINTIRGYYIPTEKNAPVSDFYERMGFKLK 548 (574)
T ss_pred cCceEEEEEEEe--cCCeEEhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEecccccCCcHHHHHHHhccccc
Confidence 467888877754 2356778777777777789999999999999999999998765 32 12 35899999999954
No 94
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=88.11 E-value=1.7 Score=36.22 Aligned_cols=48 Identities=10% Similarity=0.070 Sum_probs=32.3
Q ss_pred eEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcC
Q psy7904 11 ILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHE 59 (181)
Q Consensus 11 ~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~g 59 (181)
.++|+-+=-.. +..---+.-+.|-|.+|+||||+.|++.-=+.++..+
T Consensus 66 h~vGyFSKEk~-s~~~~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~ 113 (188)
T PF01853_consen 66 HIVGYFSKEKE-SWDNNNLSCILTLPPYQRKGYGRFLIDFSYELSRREG 113 (188)
T ss_dssp EEEEEEEEESS--TT-EEESEEEE-GGGTTSSHHHHHHHHHHHHHHHTT
T ss_pred eeEEEEEEEec-ccCCeeEeehhhcchhhhcchhhhhhhhHHHHhhccC
Confidence 47886553221 1111235557899999999999999999888887655
No 95
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=85.27 E-value=5.5 Score=31.01 Aligned_cols=56 Identities=16% Similarity=0.214 Sum_probs=46.1
Q ss_pred ECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE
Q psy7904 8 CLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT 65 (181)
Q Consensus 8 ~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt 65 (181)
.+|++||++++...++ +.. -+.+.=+|++....+|+..+=..+++|++.|...+..
T Consensus 46 ~~~kLiav~v~D~l~~-glS-aVY~fyDPd~~~~SlG~~~iL~eI~~a~~~~l~y~YL 101 (128)
T PF04377_consen 46 LDGKLIAVAVVDILPD-GLS-AVYTFYDPDYSKRSLGTYSILREIELARELGLPYYYL 101 (128)
T ss_pred eCCeEEEEEEeecccc-hhh-heeeeeCCCccccCcHHHHHHHHHHHHHHcCCCEEee
Confidence 5899999999887663 333 3555679999999999999999999999999998753
No 96
>KOG2696|consensus
Probab=82.94 E-value=1.4 Score=40.40 Aligned_cols=55 Identities=11% Similarity=0.039 Sum_probs=37.9
Q ss_pred EEEEEEEEEcC---CCCEEEEEEEEeCCCCccCCHHHHHHHHHH-HHHHhcCccEEEEc
Q psy7904 12 LWISICFRMFP---TQGFTEIVFCAVNCSVQVLGYGTYMMNHLK-EYHKKHEIYHFLTF 66 (181)
Q Consensus 12 VIG~i~~r~~~---~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~-~~ak~~gi~~llt~ 66 (181)
++|+.++--|. ++-..-|+-+-+.|.+|++|+|+.||+.+. +++....+..+.+.
T Consensus 200 ~~gy~tiyk~y~yid~~R~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~~p~v~DiTVE 258 (403)
T KOG2696|consen 200 YVGYYTIYKFYEYIDRIRPRISQMLILPPFQGKGLGSQLYEAIARDYLEEPTVLDITVE 258 (403)
T ss_pred eeeeEEEeehhhhhhhhhhhhheeEEeccccCCchHHHHHHHHHHhhccCCceeEEEec
Confidence 56666654332 121234677889999999999999999998 55556666666554
No 97
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=81.03 E-value=1.7 Score=38.49 Aligned_cols=48 Identities=13% Similarity=0.139 Sum_probs=33.0
Q ss_pred eEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcC
Q psy7904 11 ILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHE 59 (181)
Q Consensus 11 ~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~g 59 (181)
.++|+-+=-.....+ --+.-+.|.|-+|+||||+.|++.-=+.++..|
T Consensus 141 h~vGYFSKEK~s~~~-nNLaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 141 HIVGYFSKEKVSAED-YNLACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred EEEEEeceeccccCC-CcEEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 588865432111111 125557789999999999999999888887654
No 98
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=77.79 E-value=21 Score=30.63 Aligned_cols=56 Identities=14% Similarity=0.109 Sum_probs=46.3
Q ss_pred ECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE
Q psy7904 8 CLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT 65 (181)
Q Consensus 8 ~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt 65 (181)
.+|++||.++....++ +.. -+...=+|++-..++|+..+=.-+++|++.|..++..
T Consensus 151 ~~g~LiaVav~D~l~d-~lS-AVY~FyDPd~~~~SLG~~~iL~qI~~ak~~gl~y~YL 206 (240)
T PRK01305 151 GDGKLVAVAVTDVLDD-GLS-AVYTFYDPDEEHRSLGTFAILWQIELAKRLGLPYVYL 206 (240)
T ss_pred eCCeEEEEEEEeccCC-cee-eEEEeeCCCccccCCHHHHHHHHHHHHHHcCCCeEee
Confidence 5899999999887664 433 4556689999999999999999999999999988754
No 99
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=77.28 E-value=13 Score=32.37 Aligned_cols=78 Identities=10% Similarity=0.016 Sum_probs=54.0
Q ss_pred EEEE-ECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEcc-Cc--chHHHHHhcC
Q psy7904 4 LKLW-CLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFA-AK--DAIGYFTRQG 79 (181)
Q Consensus 4 lv~~-~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~A-dn--~Ai~FYkK~G 79 (181)
+++. .+|++||++.+.... +.+.....+.+++++..+-+..|+-+++++|.++|+..+--.. +. ....|=++.|
T Consensus 198 ~~a~~~~g~~va~~l~~~~~--~~~~~~~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~fDfG~s~~~~G~~~FK~~~G 275 (330)
T TIGR03019 198 LTVRLGDGVVASAVLSFYFR--DEVLPYYAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRSKRGTGPFKFKKNWG 275 (330)
T ss_pred EEEEeCCCCEEEEEEEEEeC--CEEEEEeccChHHHHhhChHHHHHHHHHHHHHHCCCcEEEcCCCCCCCccHHHHhcCC
Confidence 3445 588888876654433 3343345667788888899999999999999999999875432 21 2344556679
Q ss_pred CeEe
Q psy7904 80 FTKD 83 (181)
Q Consensus 80 F~~~ 83 (181)
|+..
T Consensus 276 ~~~~ 279 (330)
T TIGR03019 276 FEPQ 279 (330)
T ss_pred Ceec
Confidence 9874
No 100
>PLN03239 histone acetyltransferase; Provisional
Probab=77.03 E-value=2.1 Score=38.80 Aligned_cols=48 Identities=19% Similarity=0.161 Sum_probs=32.6
Q ss_pred eEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcC
Q psy7904 11 ILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHE 59 (181)
Q Consensus 11 ~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~g 59 (181)
.++|+-+=-.....+ --+.-|.|.|-+|+||||+.||+.-=+.++..|
T Consensus 199 h~vGYFSKEK~s~~~-~NLaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg 246 (351)
T PLN03239 199 HPVGYYSKEKYSDVG-YNLACILTFPAHQRKGYGRFLIAFSYELSKKEE 246 (351)
T ss_pred EEEEEeeecccCCCC-CceEEEEecChhhhcchhhhhHhhhhHhhhhcC
Confidence 578864422111111 125557789999999999999999888887654
No 101
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=75.38 E-value=7.1 Score=31.76 Aligned_cols=68 Identities=9% Similarity=-0.042 Sum_probs=42.5
Q ss_pred EEECCeEEEEEEEEE---cCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHH
Q psy7904 6 LWCLGILWISICFRM---FPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFT 76 (181)
Q Consensus 6 ~~~dg~VIG~i~~r~---~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYk 76 (181)
++-++..-|++.+.+ -....++.+..+||+++.||.|++-.+-+.+.+-.. -...-+.++|....+|-
T Consensus 65 iy~d~~y~~~AIVt~e~~~~~~~v~yLdKFav~~~~~g~gv~D~vf~~i~~d~p---~L~Wrsr~~n~~~~Wyf 135 (170)
T PF04768_consen 65 IYVDEDYEGAAIVTPEGPDSNGPVPYLDKFAVSKSAQGSGVADNVFNAIRKDFP---KLFWRSREDNPNNKWYF 135 (170)
T ss_dssp EEEETTSSEEEEEEEE-SCTCTSEEEEEEEEE-HHHHHTTHHHHHHHHHHHH-S---SEEEEEETT-TTHHHHH
T ss_pred EEEeCCceEEEEEEecCCCCCCCCeEEEEEEecchhhhcCHHHHHHHHHHHhcc---ceEEEecCCCCcccEEE
Confidence 333444444444433 233458899999999999999999999999866443 22223456776666653
No 102
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=74.04 E-value=5.7 Score=28.83 Aligned_cols=24 Identities=13% Similarity=-0.082 Sum_probs=19.7
Q ss_pred CEEEEEEEEeCCCCccCCHHHHHH
Q psy7904 25 GFTEIVFCAVNCSVQVLGYGTYMM 48 (181)
Q Consensus 25 ~~~EI~~~AV~~~~QgKG~Gs~Lm 48 (181)
..+|+..+||+|++|+...-..|.
T Consensus 77 ~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 77 RVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred cEEEeehheECHhHCCChHHHHHh
Confidence 468999999999999987766654
No 103
>PTZ00064 histone acetyltransferase; Provisional
Probab=72.28 E-value=3.1 Score=39.58 Aligned_cols=48 Identities=10% Similarity=-0.010 Sum_probs=32.9
Q ss_pred eEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcC
Q psy7904 11 ILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHE 59 (181)
Q Consensus 11 ~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~g 59 (181)
.+||+-+=-.....+ --+.-|-|.|-||+||||+.||+.-=+..+..|
T Consensus 370 HiVGYFSKEK~S~~~-nNLACILtLPpyQRKGYGklLIdfSYeLSrrEg 417 (552)
T PTZ00064 370 HIVGYFSKEKVSLLH-YNLACILTLPCYQRKGYGKLLVDLSYKLSLKEG 417 (552)
T ss_pred EEEEEecccccCccc-CceEEEEecchhhhcchhhhhhhhhhhhhhhcC
Confidence 688864422111111 125557789999999999999999888877654
No 104
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=72.06 E-value=4.7 Score=37.79 Aligned_cols=48 Identities=13% Similarity=0.119 Sum_probs=32.5
Q ss_pred eEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcC
Q psy7904 11 ILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHE 59 (181)
Q Consensus 11 ~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~g 59 (181)
.+||+-+=-.....+ --+.-|-|.|-||+||||+.|++.-=+..+..|
T Consensus 292 h~vGyFSKEk~s~~~-~NLaCIltlP~yQrkGyG~~LI~~SYeLSr~eg 339 (450)
T PLN00104 292 HMVGYFSKEKHSEED-YNLACILTLPPYQRKGYGKFLIAFSYELSKREG 339 (450)
T ss_pred EEEEEecccccCcCC-CceEEEEecchhhhcchhheehhheehhhhccC
Confidence 688865422111111 125557789999999999999998877777654
No 105
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=70.37 E-value=23 Score=30.78 Aligned_cols=68 Identities=16% Similarity=-0.018 Sum_probs=48.1
Q ss_pred EEEEE-CCeEEEEEEEEE-cCCCC-EEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEE-EEccCcch
Q psy7904 4 LKLWC-LGILWISICFRM-FPTQG-FTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHF-LTFAAKDA 71 (181)
Q Consensus 4 lv~~~-dg~VIG~i~~r~-~~~~~-~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~l-lt~Adn~A 71 (181)
+-++. ||++||...-.| +.... +..-...+|.|++++.|+|-.|=..=-+.+.+.|++.+ +|+...+|
T Consensus 49 lgAf~~dg~lVGls~G~pg~r~g~~y~ySH~~gV~e~~k~sglg~aLK~~Qre~a~~~G~tli~WTfDPl~a 120 (266)
T COG3375 49 LGAFSADGRLVGLSYGYPGGRGGSLYLYSHMLGVREEVKGSGLGVALKMKQRERALSMGYTLIAWTFDPLNA 120 (266)
T ss_pred EEEEcCCCcEEEEEeccCCcCCCceeeeeeehhccccccccchhhhhHHHHHHHHHhcCeeeEEEecccchh
Confidence 34455 458888655444 21222 44556689999999999999998888888999999876 67654443
No 106
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=67.48 E-value=2.3 Score=40.19 Aligned_cols=56 Identities=20% Similarity=0.239 Sum_probs=42.5
Q ss_pred EEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccE------EE-EccCc-chHHHHHhcCCeE
Q psy7904 27 TEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYH------FL-TFAAK-DAIGYFTRQGFTK 82 (181)
Q Consensus 27 ~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~------ll-t~Adn-~Ai~FYkK~GF~~ 82 (181)
+-|..+.|+|++|+-|+|..-|..+.++..+.-+.. +. +-|.. .--+||++.||.-
T Consensus 242 ariarvvvhpdyr~dglg~~sv~~a~ewI~eRriPEmr~rkHlvetiaqmarynpffe~~gfky 305 (593)
T COG2401 242 ARIARVVVHPDYRADGLGQLSVIAALEWIIERRIPEMRPRKHLVETIAQMARYNPFFEKVGFKY 305 (593)
T ss_pred hheeEEEeccccccCccchhHHHHHHHHHHHhhChhhhhhhhHHHHHHHHHhcCchhhhhceee
Confidence 458889999999999999999999999998865543 21 11211 1257999999964
No 107
>KOG2779|consensus
Probab=66.57 E-value=8.3 Score=35.45 Aligned_cols=53 Identities=13% Similarity=0.073 Sum_probs=42.4
Q ss_pred CCeEEEEEEEEEcC----C--CCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCcc
Q psy7904 9 LGILWISICFRMFP----T--QGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIY 61 (181)
Q Consensus 9 dg~VIG~i~~r~~~----~--~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~ 61 (181)
.+++||+|+..|.. + -.-+||.|++|+...|+|+++--|+.++-..+.-.||-
T Consensus 144 s~kLVaFIsaiP~~irvrdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~gIf 202 (421)
T KOG2779|consen 144 SKKLVAFISAIPATIRVRDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNLEGIF 202 (421)
T ss_pred CCceEEEEeccccEEEEccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhhhhhh
Confidence 46899999976522 1 13689999999999999999999999988777666654
No 108
>KOG2747|consensus
Probab=66.23 E-value=7.5 Score=35.89 Aligned_cols=30 Identities=17% Similarity=0.280 Sum_probs=24.2
Q ss_pred EEEEEeCCCCccCCHHHHHHHHHHHHHHhc
Q psy7904 29 IVFCAVNCSVQVLGYGTYMMNHLKEYHKKH 58 (181)
Q Consensus 29 I~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~ 58 (181)
+.-+-|.|-+|++|||+.|++.==+..+..
T Consensus 263 laCILtLPpyQRkGYGklLIdFSYeLSr~E 292 (396)
T KOG2747|consen 263 LACILTLPPYQRKGYGKLLIDFSYELSRRE 292 (396)
T ss_pred eeeeeecChhhhcccchhhhhhhhhhhccc
Confidence 555778999999999999999866666543
No 109
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=62.49 E-value=39 Score=25.64 Aligned_cols=49 Identities=10% Similarity=-0.019 Sum_probs=34.7
Q ss_pred CCEEEEEEEEeCCCCcc-CCHHHHHHHHHHHHHHhcCccEEEE-ccCcchHHHH
Q psy7904 24 QGFTEIVFCAVNCSVQV-LGYGTYMMNHLKEYHKKHEIYHFLT-FAAKDAIGYF 75 (181)
Q Consensus 24 ~~~~EI~~~AV~~~~Qg-KG~Gs~Lm~~l~~~ak~~gi~~llt-~Adn~Ai~FY 75 (181)
..++.+..+||+++.|| .|++..+-+.+++- ..-.-+++ ..||....+|
T Consensus 37 ~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~~---fp~~L~Wrsr~~n~~n~Wy 87 (108)
T cd04266 37 EKIAYLDKFAVLPKAQGSDGIADILFNAMLDG---FPNELIWRSRKDNPVNKWY 87 (108)
T ss_pred CCceEEEEEEEccccccccchHHHHHHHHHHc---CCCceEEEeCCCCcccceE
Confidence 46788999999999997 89999999998872 12112343 4566555544
No 110
>PRK04531 acetylglutamate kinase; Provisional
Probab=58.05 E-value=40 Score=30.91 Aligned_cols=64 Identities=14% Similarity=0.048 Sum_probs=41.8
Q ss_pred EEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE-ccCcchHHHH
Q psy7904 6 LWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT-FAAKDAIGYF 75 (181)
Q Consensus 6 ~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt-~Adn~Ai~FY 75 (181)
++-++..-|.+.... +..+..+..+||+++.||.|++..+-+.+++... .-+|+ .+||....+|
T Consensus 292 ~y~~~~y~~~Aiv~~--~~~~~~Ldkf~v~~~~~~~~v~d~vf~~~~~~~~----~L~Wrsr~~n~~~~Wy 356 (398)
T PRK04531 292 AYVSENYRAAAILTE--TGGGPYLDKFAVLDDARGEGLGRAVWNVMREETP----QLFWRSRHNNTINKFY 356 (398)
T ss_pred EEEeCCCcEEEEEec--CCCceEeEEEEEccchhhcChHHHHHHHHHhhCC----ceEEEcCCCCCcccee
Confidence 344444334444432 2356788999999999999999999999887653 23454 4566544443
No 111
>KOG4601|consensus
Probab=56.31 E-value=9.7 Score=33.06 Aligned_cols=27 Identities=22% Similarity=0.105 Sum_probs=23.9
Q ss_pred EEEEEEEeCCCCccCCHHHHHHHHHHH
Q psy7904 27 TEIVFCAVNCSVQVLGYGTYMMNHLKE 53 (181)
Q Consensus 27 ~EI~~~AV~~~~QgKG~Gs~Lm~~l~~ 53 (181)
.-|..++|+++.|+.|-|..|.+.+.+
T Consensus 109 lcILDFyVheS~QR~G~G~~lfdyMl~ 135 (264)
T KOG4601|consen 109 LCILDFYVHESEQRSGNGFKLFDYMLK 135 (264)
T ss_pred ceEEEEEeehhhhhcCchHHHHHHHHH
Confidence 358889999999999999999998765
No 112
>PHA02769 hypothetical protein; Provisional
Probab=55.27 E-value=16 Score=28.72 Aligned_cols=41 Identities=17% Similarity=0.308 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHh---cCccEEEEcc-CcchHHHHHhcCCeEee
Q psy7904 44 GTYMMNHLKEYHKK---HEIYHFLTFA-AKDAIGYFTRQGFTKDI 84 (181)
Q Consensus 44 Gs~Lm~~l~~~ak~---~gi~~llt~A-dn~Ai~FYkK~GF~~~i 84 (181)
|..|+|.|.+.+.+ .|...++|-. ...+-++|+|.||...+
T Consensus 94 gd~lvnfl~~l~~k~~~dg~evlwtlgfpdhsnaly~kagfk~vg 138 (154)
T PHA02769 94 GDHLVNFLNDLAEKLKKDGFEVLWTLGFPDHSNALYKKAGFKLVG 138 (154)
T ss_pred hHHHHHHHHHHHHHHhcCCeEEEEEecCCCcchhHHhhhhhhHhc
Confidence 68899888877654 5788888743 33567899999997744
No 113
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=54.44 E-value=1.2e+02 Score=25.95 Aligned_cols=59 Identities=12% Similarity=0.027 Sum_probs=38.1
Q ss_pred EEEEE-CCeEEEEEEEEEcC-CCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEE
Q psy7904 4 LKLWC-LGILWISICFRMFP-TQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFL 64 (181)
Q Consensus 4 lv~~~-dg~VIG~i~~r~~~-~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~ll 64 (181)
+++.. +|+++|++.+.+.. ..++. +.+.==+++ --+|+=..|+.++.+.+++.|+..+-
T Consensus 183 ~~~~~~dgki~af~~~~~~~~~~~~~-~~~~k~~~~-a~~G~~e~l~~~~~~~~~~~g~~~ln 243 (299)
T PF09924_consen 183 FVARVADGKIVAFAIGSPLGGRDGWS-IDFEKADPD-APKGIYEFLNVEFAEHLKAEGVEYLN 243 (299)
T ss_dssp EEEEE-TTEEEEEEEEEEEE-TTEEE-EEEEEE-TT--STTHHHHHHHHHHHHS--TT--EEE
T ss_pred EEEEECCCcEEEEEEEEEccCCccEE-EEEEecCCC-CCCcHHHHHHHHHHHhhhhCCceEEE
Confidence 34556 89999999999877 33322 222212232 36899999999999999988988874
No 114
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=53.78 E-value=84 Score=23.37 Aligned_cols=65 Identities=6% Similarity=-0.035 Sum_probs=41.5
Q ss_pred EEECCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE-ccCcchHHHH
Q psy7904 6 LWCLGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT-FAAKDAIGYF 75 (181)
Q Consensus 6 ~~~dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt-~Adn~Ai~FY 75 (181)
++-++..-|.+.+.. +...++.+..+||+++.++.|++..+-+.+++... .-+++ ..+|....+|
T Consensus 14 ~y~de~y~~~AIvt~-~~~~v~~LdkFav~~~~~~~gv~D~vf~~i~~d~~----~L~Wrsr~~n~~n~Wy 79 (98)
T cd03173 14 SYADEPLEGVAIVTY-EGNSIPYLDKFAVSDHLWLNNVTDNIFNLIRKDFP----SLLWRVRENDANLKWY 79 (98)
T ss_pred EEEcCCccEEEEEec-CCCCCEEEEEEEEcccccccCHHHHHHHHHHhhCC----eeEEEeCCCCCccceE
Confidence 334444444444433 22468899999999999999999999998876532 22343 4555544443
No 115
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=52.11 E-value=82 Score=28.22 Aligned_cols=79 Identities=14% Similarity=0.081 Sum_probs=57.6
Q ss_pred EEEECCeEEEEEEEEEcCCCC-----EEEEEEEEeCCCCccCCHHHHHHHHHHHHHHh--------c-Ccc-EEEE--cc
Q psy7904 5 KLWCLGILWISICFRMFPTQG-----FTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKK--------H-EIY-HFLT--FA 67 (181)
Q Consensus 5 v~~~dg~VIG~i~~r~~~~~~-----~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~--------~-gi~-~llt--~A 67 (181)
+++..+.+|+.+++.+..++. .+.|.-+.|..-|..-|+=.-|++.+.-.+|+ . |.. .+++ |+
T Consensus 173 IIvYRetPIAiisl~~~~~~St~~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~l~~ey~k~k~~~si~ll~d~YS 252 (304)
T PF11124_consen 173 IIVYRETPIAIISLVPNKDQSTKENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQLYKEYLKGKKGCSIKLLVDVYS 252 (304)
T ss_pred EEEEcCCceEEEEeccccccCCCceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHHHHHHhccccccceEEEEEEeee
Confidence 455678899999998855432 34677788888899999999999988555544 1 222 2333 65
Q ss_pred -CcchHHHHHhcCCeEe
Q psy7904 68 -AKDAIGYFTRQGFTKD 83 (181)
Q Consensus 68 -dn~Ai~FYkK~GF~~~ 83 (181)
|+.-....++.||+..
T Consensus 253 FD~~~~k~L~~~gF~~i 269 (304)
T PF11124_consen 253 FDKDMKKTLKKKGFKKI 269 (304)
T ss_pred ccHHHHHHHHHCCCeee
Confidence 6778999999999874
No 116
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=50.70 E-value=33 Score=28.22 Aligned_cols=53 Identities=15% Similarity=0.154 Sum_probs=44.9
Q ss_pred EEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeE
Q psy7904 26 FTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTK 82 (181)
Q Consensus 26 ~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~ 82 (181)
.+||.++|.. ..|.+..|+..+...+...|+..++..+...-...|.|.|...
T Consensus 87 IvEvGnLAs~----~~g~~~~l~~~l~~~L~~~g~~w~vfTaT~~lr~~~~rlgl~~ 139 (179)
T PF12261_consen 87 IVEVGNLASF----SPGAARLLFAALAQLLAQQGFEWVVFTATRQLRNLFRRLGLPP 139 (179)
T ss_pred eeEeechhhc----CcccHHHHHHHHHHHHHHCCCCEEEEeCCHHHHHHHHHcCCCc
Confidence 4788888733 5899999999999999999999987766666788999999964
No 117
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=50.11 E-value=58 Score=29.73 Aligned_cols=54 Identities=7% Similarity=0.203 Sum_probs=42.3
Q ss_pred EEeCCCCccCCHHHHHHHHHHHHHHhcCccEE-EEccCcchHHHHHhcCCeEeee
Q psy7904 32 CAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHF-LTFAAKDAIGYFTRQGFTKDIK 85 (181)
Q Consensus 32 ~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~l-lt~Adn~Ai~FYkK~GF~~~i~ 85 (181)
+-+++......+.+.|++.+.+.+++.|+..+ +.+.+..-....+..||....+
T Consensus 106 ~l~~~~~~~~~~~~~L~~~~~~~a~~~~~Ss~h~lF~~~~~~~~l~~~G~~~r~~ 160 (370)
T PF04339_consen 106 LLIAPGADRAALRAALLQALEQLAEENGLSSWHILFPDEEDAAALEEAGFLSRQG 160 (370)
T ss_pred eeECCCCCHHHHHHHHHHHHHHHHHHcCCCcceeecCCHHHHHHHHhCCCceecC
Confidence 55677777888899999999999999999864 3466665566678999977543
No 118
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=44.12 E-value=9.2 Score=34.99 Aligned_cols=41 Identities=15% Similarity=0.032 Sum_probs=26.4
Q ss_pred eEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHH
Q psy7904 11 ILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLK 52 (181)
Q Consensus 11 ~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~ 52 (181)
.+||+.+=-....++ --+.-+-+.|-+|++|||+.||+.-=
T Consensus 248 h~vGyFSKEK~S~~~-yNLaCILtLP~yQRrGYG~lLIdFSY 288 (395)
T COG5027 248 HLVGYFSKEKESEQD-YNLACILTLPPYQRRGYGKLLIDFSY 288 (395)
T ss_pred eeeeeechhhccccc-CceEEEEecChhHhcccceEeeeeee
Confidence 477865432222221 12455678899999999999987643
No 119
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=41.03 E-value=1.5e+02 Score=28.55 Aligned_cols=62 Identities=10% Similarity=-0.016 Sum_probs=46.6
Q ss_pred ccEEEEE-CCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEE
Q psy7904 2 VPLKLWC-LGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFL 64 (181)
Q Consensus 2 ~~lv~~~-dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~ll 64 (181)
+|+.+.+ +|+|+|++.+.+-....-.-+..+--+|+. =+|.=..|..++..++|++|++.+-
T Consensus 393 ~~va~~~~~g~VvaFa~l~~~~~~~~~SlDlMR~sp~a-p~g~mdfLf~~li~~aKe~G~~~fs 455 (538)
T COG2898 393 FPVAAVDNEGEVVAFANLMPTGGKEGYSLDLMRRSPDA-PNGTMDFLFSELILWAKEEGYQRFS 455 (538)
T ss_pred ceeeEEcCCCCeEEEEeecccCCcceeEEEeeecCCCC-CchHHHHHHHHHHHHHHHcCCeEEe
Confidence 5777776 688999999987443333344555556653 4799999999999999999999874
No 120
>cd07235 MRD Mitomycin C resistance protein (MRD). Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.
Probab=40.79 E-value=24 Score=25.06 Aligned_cols=14 Identities=21% Similarity=0.648 Sum_probs=12.2
Q ss_pred chHHHHHhcCCeEe
Q psy7904 70 DAIGYFTRQGFTKD 83 (181)
Q Consensus 70 ~Ai~FYkK~GF~~~ 83 (181)
.|+.||+++||+..
T Consensus 13 ~a~~FY~~LGf~~~ 26 (122)
T cd07235 13 KSLDFYRRLGFDFP 26 (122)
T ss_pred HHHHHHHHhCceec
Confidence 58999999999863
No 121
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=39.34 E-value=85 Score=21.28 Aligned_cols=43 Identities=7% Similarity=-0.027 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeEeeec
Q psy7904 44 GTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTKDIKL 86 (181)
Q Consensus 44 Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~~i~l 86 (181)
|-.++..+.+.+++.|..-.++..+......+++.|+.....+
T Consensus 55 g~~~L~~l~~~~~~~g~~v~i~~~~~~~~~~l~~~gl~~~~~i 97 (99)
T cd07043 55 GLGVLLGAYKRARAAGGRLVLVNVSPAVRRVLELTGLDRLFPI 97 (99)
T ss_pred hHHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCcceeeec
Confidence 4556666667777778777777777788999999998765443
No 122
>KOG3014|consensus
Probab=38.92 E-value=31 Score=30.14 Aligned_cols=31 Identities=10% Similarity=0.019 Sum_probs=26.0
Q ss_pred EEEEEEEEeCCCCccCCHHHHHHHHHHHHHH
Q psy7904 26 FTEIVFCAVNCSVQVLGYGTYMMNHLKEYHK 56 (181)
Q Consensus 26 ~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak 56 (181)
+.-|..++|.+..|++|+++.|+.-+...-.
T Consensus 183 ~~GIsRIWV~s~~Rr~gIAs~lldva~~~~~ 213 (257)
T KOG3014|consen 183 ICGISRIWVSSLRRRKGIASLLLDVARCNFV 213 (257)
T ss_pred EeeeEEEEeehhhhhhhhHHHHHHHHHHhhh
Confidence 4568999999999999999999988765443
No 123
>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=35.59 E-value=55 Score=23.41 Aligned_cols=14 Identities=21% Similarity=0.581 Sum_probs=12.3
Q ss_pred chHHHHHhcCCeEe
Q psy7904 70 DAIGYFTRQGFTKD 83 (181)
Q Consensus 70 ~Ai~FYkK~GF~~~ 83 (181)
.|+.||+..||+..
T Consensus 13 ~s~~FY~~lGf~~~ 26 (124)
T cd09012 13 KSTAFYTALGFEFN 26 (124)
T ss_pred HHHHHHHHCCCEEc
Confidence 58999999999874
No 124
>COG3146 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.88 E-value=1.2e+02 Score=27.95 Aligned_cols=49 Identities=14% Similarity=0.180 Sum_probs=38.5
Q ss_pred eCCCCccCCHHHHHHHHHHHHHHhcCccEE-EEccCcchHHHHHhcCCeE
Q psy7904 34 VNCSVQVLGYGTYMMNHLKEYHKKHEIYHF-LTFAAKDAIGYFTRQGFTK 82 (181)
Q Consensus 34 V~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~l-lt~Adn~Ai~FYkK~GF~~ 82 (181)
+++..-..-....|+..+.+.+.++|+... +++.+....+..++.||..
T Consensus 123 ~~~~~d~~~~~~~L~~~l~~~~~~~glSS~Hv~F~~~~~~~~l~~~Gfl~ 172 (387)
T COG3146 123 ARDGEDEEEVRQALLAGLDELCEQSGLSSAHVTFVDEDEQPALEKAGFLH 172 (387)
T ss_pred cCccccHHHHHHHHHHHHHHHHHhcCCCceeEecCCHHHHHHHHhccchh
Confidence 334333334568899999999999999975 5688888999999999976
No 125
>COG5482 Uncharacterized conserved protein [Function unknown]
Probab=34.32 E-value=72 Score=26.95 Aligned_cols=57 Identities=9% Similarity=0.211 Sum_probs=41.5
Q ss_pred chHHHHHhcCCeEeeecCcccccCccccCCCceeEeeeecccccceehHHHHHHHHHH
Q psy7904 70 DAIGYFTRQGFTKDIKLPKHLYEGYIKDYEDAMLMHCEIDKRIVYTHFVSVTQSQKHI 127 (181)
Q Consensus 70 ~Ai~FYkK~GF~~~i~l~~~~~~gyikdYega~LMec~l~~~i~y~~~~~~i~~qk~~ 127 (181)
.-.+|+++.||...+++.-..-. -+++=+-..+.-|+|..+++-.-+.+-+..|+.+
T Consensus 9 Pvk~Fle~~gyvVkgEv~gCD~v-al~~d~p~vvvicELKl~fnleLilQaVdRa~~a 65 (229)
T COG5482 9 PVKGFLEKAGYVVKGEVGGCDLV-ALSDDDPPVVVICELKLNFNLELILQAVDRAATA 65 (229)
T ss_pred hHHHHhhcCCeEEecccCCceEE-EEcCCCCCEEEEEEecccccHHHHHHHHHHhhhh
Confidence 35899999999987766421101 1555555689999999999888888888887765
No 126
>PRK14852 hypothetical protein; Provisional
Probab=32.73 E-value=1.3e+02 Score=31.10 Aligned_cols=59 Identities=14% Similarity=0.108 Sum_probs=48.1
Q ss_pred EEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEEccCcchHHHHH-hcCCeEee
Q psy7904 26 FTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFT-RQGFTKDI 84 (181)
Q Consensus 26 ~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYk-K~GF~~~i 84 (181)
++|+..+|++++.+.+=+=-.|++.+..|+...++..++...+..=.+||+ -+||+..+
T Consensus 121 v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~~dd~~i~VnPkH~~FY~r~l~f~~ig 180 (989)
T PRK14852 121 VVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSEVDDILVTVNPKHVKFYTDIFLFKPFG 180 (989)
T ss_pred EEeeehheechhhcccchhHHHHHHHHHHHHHcCCCeEEEEECcchHHHHHHHhCCcccc
Confidence 689999999988777665567778888888888999988777777799999 68998854
No 127
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=30.35 E-value=2.4e+02 Score=24.73 Aligned_cols=55 Identities=13% Similarity=0.097 Sum_probs=44.5
Q ss_pred CCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEEE
Q psy7904 9 LGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFLT 65 (181)
Q Consensus 9 dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt 65 (181)
+|++|+.......++ + +--+.+.-+|++.-..+|+..+=.=+..|++.|..++..
T Consensus 159 ~G~LvAVavtDvL~d-G-lSsVY~FydPd~s~~SLGt~~iL~~I~~aq~~~l~yvYL 213 (253)
T COG2935 159 EGKLVAVAVTDVLPD-G-LSSVYTFYDPDMSKRSLGTLSILDQIAIAQRLGLPYVYL 213 (253)
T ss_pred CCcEEEEEeeecccC-c-ceeEEEEeCCChhhhcchHHHHHHHHHHHHHhCCCeEEE
Confidence 588999888877764 4 345667789999999999988877788899999998754
No 128
>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.
Probab=29.10 E-value=49 Score=24.23 Aligned_cols=25 Identities=16% Similarity=0.296 Sum_probs=16.8
Q ss_pred CccEEEEc-cC-cchHHHHHhcCCeEe
Q psy7904 59 EIYHFLTF-AA-KDAIGYFTRQGFTKD 83 (181)
Q Consensus 59 gi~~llt~-Ad-n~Ai~FYkK~GF~~~ 83 (181)
++.|+-.. .| ..|+.||++.||+..
T Consensus 3 ~i~Hi~i~v~Dl~~s~~FY~~LG~~~~ 29 (142)
T cd08353 3 RMDNVGIVVRDLEAAIAFFLELGLELE 29 (142)
T ss_pred eeeeEEEEeCCHHHHHHHHHHcCCEEc
Confidence 35565333 33 358999999999763
No 129
>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.
Probab=28.91 E-value=55 Score=23.07 Aligned_cols=25 Identities=20% Similarity=0.248 Sum_probs=18.6
Q ss_pred CccEEEEccCc--chHHHHHhcCCeEe
Q psy7904 59 EIYHFLTFAAK--DAIGYFTRQGFTKD 83 (181)
Q Consensus 59 gi~~llt~Adn--~Ai~FYkK~GF~~~ 83 (181)
++.|+...+++ .|..||+.+||...
T Consensus 2 ~i~hv~l~v~d~~~s~~FY~~lG~~~~ 28 (112)
T cd08344 2 SIDHFALEVPDLEVARRFYEAFGLDVR 28 (112)
T ss_pred ceeEEEEecCCHHHHHHHHHHhCCcEE
Confidence 46677665544 47999999999874
No 130
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=27.99 E-value=1.1e+02 Score=21.46 Aligned_cols=42 Identities=7% Similarity=-0.043 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhcCccEEEEccCcchHHHHHhcCCeEeeec
Q psy7904 45 TYMMNHLKEYHKKHEIYHFLTFAAKDAIGYFTRQGFTKDIKL 86 (181)
Q Consensus 45 s~Lm~~l~~~ak~~gi~~llt~Adn~Ai~FYkK~GF~~~i~l 86 (181)
-.++.++.+.++++|..-.++..+......++..||.....+
T Consensus 61 l~~L~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~~i 102 (108)
T TIGR00377 61 LGVLLGRYKQVRRVGGQLVLVSVSPRVARLLDITGLLRIIPI 102 (108)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHhChhheecc
Confidence 445555666677778776677777788999999999775444
No 131
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=27.44 E-value=1.7e+02 Score=26.58 Aligned_cols=133 Identities=14% Similarity=0.127 Sum_probs=0.0
Q ss_pred EEEEEC-CeEEEEEEEEEcCCCCEEEEEEEEeCC--CCccCCHHHHHHHHHHHHHHhcCccEEEE-----ccC-------
Q psy7904 4 LKLWCL-GILWISICFRMFPTQGFTEIVFCAVNC--SVQVLGYGTYMMNHLKEYHKKHEIYHFLT-----FAA------- 68 (181)
Q Consensus 4 lv~~~d-g~VIG~i~~r~~~~~~~~EI~~~AV~~--~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt-----~Ad------- 68 (181)
+.+.++ ++|+|++.+..-......-...+-=-| ++...-+=..+++.|+++++++++..+-. +..
T Consensus 38 vgv~~d~~~v~aa~ll~~~~~~~g~~~~yiprGPv~d~~d~ell~~f~~~Lk~~akk~~a~~lridP~~~~~~~~~~g~~ 117 (406)
T PF02388_consen 38 VGVKDDGGEVAAAALLLRKKPFKGFKYAYIPRGPVMDYSDEELLEFFLEELKKYAKKKRALFLRIDPNVIYQERDEDGEP 117 (406)
T ss_dssp EEEE-TTS-EEEEEEEEEEECTTTCEEEEETT--EC-TT-HHHHHHHHHHHHHHHCTTTEEEEEE--S-EEECE-TTS-E
T ss_pred EEEEeCCCeEEEEEEEEEeccCCceeEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEeCchhhhhccccccc
Q ss_pred ------cchHHHHHhcCCeEeeecCcccccCccccCCCceeEeeeecccccceehHHHHHHHHHHHHHHHHHhhhccccc
Q psy7904 69 ------KDAIGYFTRQGFTKDIKLPKHLYEGYIKDYEDAMLMHCEIDKRIVYTHFVSVTQSQKHIINYITEQKLERVQGV 142 (181)
Q Consensus 69 ------n~Ai~FYkK~GF~~~i~l~~~~~~gyikdYega~LMec~l~~~i~y~~~~~~i~~qk~~~~~~~~~~~~~~~~v 142 (181)
...+..+++.||.-. |+-.+|++-.-....+...+....-.+++..=..-....|+.....-=.|
T Consensus 118 ~~~~~~~~~~~~l~~~G~~~~---------g~~~~~~~~~qpr~~~v~dL~~~~~e~ll~~~~~~~R~~IrkA~k~GV~v 188 (406)
T PF02388_consen 118 IEGEENDELIENLKALGFRHQ---------GFTKGYDDTIQPRWTYVKDLTGFSEEELLKSFSKKTRYNIRKAEKKGVEV 188 (406)
T ss_dssp EEE-S-THHHHHHHHTT-CCT---------S-SSSTTSSSS-SEEEEEEGCC-TCHHCHHCS-HHHHHHHHHHHCTTEEE
T ss_pred ccCcchHHHHHHHHhcCceec---------CcccCCCcccCccEEEEEECCCCCHHHHHHHhcHHHHHHHHHhhcCceEE
Q ss_pred cCC
Q psy7904 143 QPG 145 (181)
Q Consensus 143 ~~~ 145 (181)
..+
T Consensus 189 r~~ 191 (406)
T PF02388_consen 189 REG 191 (406)
T ss_dssp EEE
T ss_pred EEc
No 132
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=26.83 E-value=3.8e+02 Score=28.06 Aligned_cols=54 Identities=13% Similarity=0.050 Sum_probs=42.5
Q ss_pred CCeEEEEEEEEEcCCCCEEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEE
Q psy7904 9 LGILWISICFRMFPTQGFTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFL 64 (181)
Q Consensus 9 dg~VIG~i~~r~~~~~~~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~ll 64 (181)
+|+|+|++++.|...++ .-+..+==+|+. -.|+=-.|+.++..++++.|+..+-
T Consensus 429 ~G~i~af~s~~p~~~~g-~slDLMRr~pda-pnGvmE~L~~~l~~~~k~~G~~~~s 482 (1094)
T PRK02983 429 DGQVVALLSFVPWGRRG-LSLDLMRRSPDA-PNGVIELMVAELALEAESLGITRIS 482 (1094)
T ss_pred CCeEEEEEEEeeeCCCC-EEEEecccCCCC-CCCHHHHHHHHHHHHHHHcCCCEEE
Confidence 68999999999965444 334544445553 6899999999999999999998863
No 133
>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.
Probab=26.71 E-value=64 Score=22.47 Aligned_cols=27 Identities=15% Similarity=0.330 Sum_probs=18.1
Q ss_pred CccEEEEccCc--chHHHHHh-cCCeEeee
Q psy7904 59 EIYHFLTFAAK--DAIGYFTR-QGFTKDIK 85 (181)
Q Consensus 59 gi~~llt~Adn--~Ai~FYkK-~GF~~~i~ 85 (181)
|+.|+...+++ .|+.||++ +||+....
T Consensus 1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~ 30 (126)
T cd08346 1 GLHHVTLITRDAQETVDFYTDVLGLRLVKK 30 (126)
T ss_pred CcccEEEEcCChhHhHHHHHHccCCEEeee
Confidence 45566555544 58999986 79976433
No 134
>PF09514 SSXRD: SSXRD motif; InterPro: IPR019041 Protein SSX1 can repress transcription, and this has been attributed to a putative Kruppel associated box (KRAB) repression domain at the N terminus. However, from the analysis of these deletion constructs further repression activity was found at the C terminus of SSX1. Which has been called the SSXRD (SSX Repression Domain). The potent repression exerted by full-length SSX1 appears to localise to this region []. ; GO: 0003676 nucleic acid binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=26.60 E-value=26 Score=21.49 Aligned_cols=17 Identities=35% Similarity=0.604 Sum_probs=14.5
Q ss_pred eehhhcccccCCCCCCC
Q psy7904 164 RTVKYCRKYQNIRDPDD 180 (181)
Q Consensus 164 ~~~~~~~~~~~~~~~~~ 180 (181)
|+-||.--|+.|.||.|
T Consensus 15 RERk~~~~YeEISdPee 31 (34)
T PF09514_consen 15 RERKNPVAYEEISDPEE 31 (34)
T ss_pred hhhccccceeeccCccc
Confidence 67788889999999975
No 135
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=25.19 E-value=1.3e+02 Score=25.11 Aligned_cols=38 Identities=13% Similarity=0.105 Sum_probs=31.9
Q ss_pred EEEEEEEEeCCCCccCCHHHHHHHHHHHHHHhcCccEEE
Q psy7904 26 FTEIVFCAVNCSVQVLGYGTYMMNHLKEYHKKHEIYHFL 64 (181)
Q Consensus 26 ~~EI~~~AV~~~~QgKG~Gs~Lm~~l~~~ak~~gi~~ll 64 (181)
.+|+---+|.|+.+|.|+|..| ..+--.+++.|+..-+
T Consensus 85 VaElGLygVRpDLEGlGi~hs~-r~m~PvLq~LgVPF~F 122 (196)
T PF02474_consen 85 VAELGLYGVRPDLEGLGISHSM-RVMYPVLQELGVPFGF 122 (196)
T ss_pred EEEEEEEEeeccccccccchhh-hhhhhHHHhcCCCeec
Confidence 4788889999999999999875 6778888888888643
No 136
>PF12953 DUF3842: Domain of unknown function (DUF3842); InterPro: IPR024208 This family of proteins has no known function.
Probab=23.98 E-value=1e+02 Score=24.33 Aligned_cols=44 Identities=14% Similarity=0.126 Sum_probs=31.1
Q ss_pred CCccCCHHHHHHHHHHHHHHhcCccEEEE-ccCcchHHHHHhcCCeE
Q psy7904 37 SVQVLGYGTYMMNHLKEYHKKHEIYHFLT-FAAKDAIGYFTRQGFTK 82 (181)
Q Consensus 37 ~~QgKG~Gs~Lm~~l~~~ak~~gi~~llt-~Adn~Ai~FYkK~GF~~ 82 (181)
+=||-|+|++|++.+++...+. .+++. .++.-|-.--.|.|-..
T Consensus 6 DGQGGGiG~~iv~~lr~~~~~~--~eI~AlGTNa~AT~~MlKaGA~~ 50 (131)
T PF12953_consen 6 DGQGGGIGKQIVEKLRKELPEE--VEIIALGTNAIATSAMLKAGANE 50 (131)
T ss_pred eCCCChhHHHHHHHHHHhCCCC--cEEEEEehhHHHHHHHHHcCCCC
Confidence 3589999999999999877651 23333 33345777888888765
No 137
>PF02334 RTP: Replication terminator protein; InterPro: IPR003432 The bacterial replication terminator protein (RTP) plays a role in the termination of DNA replication by impeding replication fork movement. Two RTP dimers bind to the two inverted repeat regions at the termination site.; GO: 0003677 DNA binding, 0006274 DNA replication termination; PDB: 2DPU_A 2DPD_A 1F4K_A 1J0R_B 2EFW_F 2DQR_B 1BM9_B.
Probab=23.87 E-value=17 Score=28.14 Aligned_cols=22 Identities=27% Similarity=0.409 Sum_probs=19.3
Q ss_pred CccCCHHHHHHHHHHHHHHhcC
Q psy7904 38 VQVLGYGTYMMNHLKEYHKKHE 59 (181)
Q Consensus 38 ~QgKG~Gs~Lm~~l~~~ak~~g 59 (181)
+|++|||.+|++.+.+..+..|
T Consensus 28 e~~r~Yg~q~Ld~lr~EFk~~G 49 (122)
T PF02334_consen 28 EQERGYGLQLLDELRSEFKPLG 49 (122)
T ss_dssp HTT-EBCTCHHHHHHHHHTTTT
T ss_pred hcccchHHHHHHHHHHHhhhcC
Confidence 6889999999999999999877
No 138
>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase. This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.
Probab=22.43 E-value=1.1e+02 Score=21.63 Aligned_cols=24 Identities=21% Similarity=0.169 Sum_probs=16.8
Q ss_pred ccEEEEccCc--chHHHHHhcCCeEe
Q psy7904 60 IYHFLTFAAK--DAIGYFTRQGFTKD 83 (181)
Q Consensus 60 i~~llt~Adn--~Ai~FYkK~GF~~~ 83 (181)
+.|+....++ .|..||+..||+..
T Consensus 4 l~hv~l~v~Dl~~s~~FY~~lGl~~~ 29 (113)
T cd07267 4 IAHVRFEHPDLDKAERFLTDFGLEVA 29 (113)
T ss_pred EEEEEEccCCHHHHHHHHHHcCCEEE
Confidence 4555544433 58999999999774
No 139
>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain. This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa
Probab=21.96 E-value=1.3e+02 Score=20.79 Aligned_cols=25 Identities=20% Similarity=0.092 Sum_probs=17.9
Q ss_pred ccEEEEccCc--chHHHHHh-cCCeEee
Q psy7904 60 IYHFLTFAAK--DAIGYFTR-QGFTKDI 84 (181)
Q Consensus 60 i~~llt~Adn--~Ai~FYkK-~GF~~~i 84 (181)
+.|+...+++ .++.||++ +||....
T Consensus 3 l~hv~l~v~d~~~~~~FY~~~lg~~~~~ 30 (117)
T cd07240 3 IAYAELEVPDLERALEFYTDVLGLTVLD 30 (117)
T ss_pred eeEEEEecCCHHHHHHHHHhccCcEEEe
Confidence 4566555444 47999999 9998753
No 140
>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=20.82 E-value=91 Score=21.54 Aligned_cols=26 Identities=23% Similarity=0.374 Sum_probs=18.5
Q ss_pred CccEEEEccCc--chHHHHHh-cCCeEee
Q psy7904 59 EIYHFLTFAAK--DAIGYFTR-QGFTKDI 84 (181)
Q Consensus 59 gi~~llt~Adn--~Ai~FYkK-~GF~~~i 84 (181)
++.|+...+++ .++.||++ +||+...
T Consensus 3 ~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~ 31 (125)
T cd07253 3 RIDHVVLTVADIEATLDFYTRVLGMEVVR 31 (125)
T ss_pred ccceEEEEecCHHHHHHHHHHHhCceeec
Confidence 45666555444 57999999 8998753
No 141
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=20.69 E-value=2.9e+02 Score=26.05 Aligned_cols=46 Identities=15% Similarity=-0.010 Sum_probs=32.1
Q ss_pred CeEEEEEEEEEc--CCCCEEEEEEEEeCCCCcc-CCHHHHHHHHHHHHH
Q psy7904 10 GILWISICFRMF--PTQGFTEIVFCAVNCSVQV-LGYGTYMMNHLKEYH 55 (181)
Q Consensus 10 g~VIG~i~~r~~--~~~~~~EI~~~AV~~~~Qg-KG~Gs~Lm~~l~~~a 55 (181)
|.--|.+.+.-. .++.+..+..+||.++.|| -|+|..+.+-+-+..
T Consensus 382 gdY~g~aIlTyegs~~~~vpYLDKfAVl~~aQGs~gisd~vfniM~e~f 430 (495)
T COG5630 382 GDYRGAAILTYEGSGENNVPYLDKFAVLDDAQGSEGISDAVFNIMREEF 430 (495)
T ss_pred ccceeeEEEEeeccCCCCCcceeeeeccccccccchHHHHHHHHHHHhC
Confidence 444444444332 2235678899999999999 999999888766543
Done!