Query psy7928
Match_columns 87
No_of_seqs 105 out of 1229
Neff 9.9
Searched_HMMs 46136
Date Fri Aug 16 22:26:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7928.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7928hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569|consensus 99.2 1.6E-10 3.5E-15 77.2 7.9 84 1-87 300-383 (485)
2 KOG0254|consensus 98.9 1.7E-08 3.7E-13 67.7 10.0 77 10-86 332-409 (513)
3 PRK10077 xylE D-xylose transpo 98.1 0.00011 2.3E-09 48.7 10.0 50 8-57 307-356 (479)
4 TIGR00879 SP MFS transporter, 97.7 0.00091 2E-08 43.6 10.1 49 8-56 320-368 (481)
5 TIGR01299 synapt_SV2 synaptic 97.5 0.0013 2.7E-08 46.9 8.9 46 10-55 598-643 (742)
6 TIGR00887 2A0109 phosphate:H+ 97.5 0.0015 3.2E-08 44.0 8.9 41 17-57 345-385 (502)
7 TIGR00881 2A0104 phosphoglycer 97.5 0.00081 1.8E-08 42.6 7.2 49 8-56 31-79 (379)
8 PF07690 MFS_1: Major Facilita 97.5 0.00094 2E-08 42.1 7.4 47 8-54 33-79 (352)
9 TIGR00890 2A0111 Oxalate/Forma 97.5 0.0017 3.6E-08 41.2 8.4 44 11-54 244-287 (377)
10 TIGR00900 2A0121 H+ Antiporter 97.5 0.0016 3.4E-08 41.2 8.2 46 11-56 38-83 (365)
11 TIGR00891 2A0112 putative sial 97.5 0.00084 1.8E-08 43.1 7.0 47 8-54 48-94 (405)
12 PRK10077 xylE D-xylose transpo 97.5 0.00071 1.5E-08 44.8 6.8 44 11-54 59-102 (479)
13 TIGR00886 2A0108 nitrite extru 97.5 0.00067 1.5E-08 43.2 6.4 46 10-55 40-85 (366)
14 TIGR00893 2A0114 d-galactonate 97.5 0.0012 2.5E-08 41.9 7.4 48 8-55 30-77 (399)
15 KOG0252|consensus 97.4 0.0013 2.8E-08 44.7 7.5 45 11-55 88-132 (538)
16 cd06174 MFS The Major Facilita 97.4 0.00072 1.6E-08 42.3 6.2 47 9-55 36-82 (352)
17 PRK15462 dipeptide/tripeptide 97.4 0.00074 1.6E-08 45.9 6.4 47 8-54 46-93 (493)
18 TIGR00879 SP MFS transporter, 97.4 0.0025 5.3E-08 41.6 8.7 44 11-54 75-118 (481)
19 PRK11273 glpT sn-glycerol-3-ph 97.4 0.0017 3.7E-08 43.1 7.9 47 9-55 65-111 (452)
20 PRK12382 putative transporter; 97.4 0.00077 1.7E-08 43.7 6.1 40 11-50 55-94 (392)
21 TIGR00895 2A0115 benzoate tran 97.4 0.002 4.3E-08 41.2 7.8 45 11-55 56-100 (398)
22 PRK05122 major facilitator sup 97.4 0.00053 1.2E-08 44.4 5.3 40 11-50 55-94 (399)
23 TIGR00890 2A0111 Oxalate/Forma 97.4 0.00059 1.3E-08 43.2 5.3 46 10-55 41-86 (377)
24 PRK11102 bicyclomycin/multidru 97.4 0.0022 4.7E-08 41.2 7.8 47 9-55 28-74 (377)
25 PRK12307 putative sialic acid 97.4 0.0012 2.7E-08 43.0 6.8 46 10-55 56-101 (426)
26 PRK09705 cynX putative cyanate 97.4 0.00091 2E-08 43.7 6.1 46 11-56 48-93 (393)
27 TIGR00711 efflux_EmrB drug res 97.3 0.0015 3.1E-08 43.3 7.0 47 8-54 38-84 (485)
28 PF12832 MFS_1_like: MFS_1 lik 97.3 0.0011 2.3E-08 34.3 5.0 44 2-46 31-74 (77)
29 TIGR00897 2A0118 polyol permea 97.3 0.0013 2.8E-08 43.0 6.5 45 8-52 49-93 (402)
30 PRK09952 shikimate transporter 97.3 0.0041 8.9E-08 41.3 8.8 37 14-50 293-329 (438)
31 TIGR00710 efflux_Bcr_CflA drug 97.3 0.0013 2.8E-08 42.1 6.3 47 9-55 42-88 (385)
32 TIGR00924 yjdL_sub1_fam amino 97.3 0.0035 7.6E-08 42.2 8.4 48 8-55 49-97 (475)
33 TIGR00898 2A0119 cation transp 97.3 0.0051 1.1E-07 41.2 9.2 47 9-55 357-403 (505)
34 PRK10213 nepI ribonucleoside t 97.3 0.0017 3.6E-08 42.5 6.7 44 11-54 59-102 (394)
35 PRK10473 multidrug efflux syst 97.3 0.0013 2.8E-08 42.6 6.0 43 13-55 44-86 (392)
36 PRK10406 alpha-ketoglutarate t 97.3 0.0014 2.9E-08 43.3 6.2 38 17-54 73-110 (432)
37 TIGR01299 synapt_SV2 synaptic 97.3 0.0036 7.7E-08 44.7 8.5 45 11-55 206-250 (742)
38 PRK10207 dipeptide/tripeptide 97.2 0.0016 3.6E-08 44.0 6.5 47 9-55 52-99 (489)
39 PRK03699 putative transporter; 97.2 0.0039 8.5E-08 40.6 8.1 44 11-54 46-89 (394)
40 PRK03545 putative arabinose tr 97.2 0.0019 4E-08 42.0 6.5 40 15-54 52-91 (390)
41 PRK10133 L-fucose transporter; 97.2 0.0049 1.1E-07 41.0 8.6 46 9-54 63-108 (438)
42 TIGR00898 2A0119 cation transp 97.2 0.0014 3E-08 43.8 6.1 44 11-54 131-174 (505)
43 PRK10091 MFS transport protein 97.2 0.002 4.3E-08 41.8 6.6 45 11-55 42-86 (382)
44 PRK15403 multidrug efflux syst 97.2 0.0016 3.5E-08 42.9 6.2 40 15-54 59-98 (413)
45 TIGR00882 2A0105 oligosacchari 97.2 0.0022 4.7E-08 41.7 6.7 39 9-47 40-78 (396)
46 PRK11551 putative 3-hydroxyphe 97.2 0.0016 3.4E-08 42.3 6.0 44 10-53 53-96 (406)
47 PRK11652 emrD multidrug resist 97.2 0.0017 3.7E-08 42.1 6.2 44 11-54 47-90 (394)
48 PRK10054 putative transporter; 97.2 0.0017 3.7E-08 42.5 6.2 44 11-54 47-90 (395)
49 TIGR02332 HpaX 4-hydroxyphenyl 97.2 0.0023 5.1E-08 42.1 6.7 45 11-55 47-91 (412)
50 PRK10642 proline/glycine betai 97.2 0.007 1.5E-07 40.7 9.0 37 11-47 290-326 (490)
51 TIGR00880 2_A_01_02 Multidrug 97.2 0.0049 1.1E-07 33.5 7.1 39 17-55 8-46 (141)
52 TIGR00885 fucP L-fucose:H+ sym 97.2 0.0062 1.3E-07 40.3 8.5 45 10-54 41-85 (410)
53 PRK15402 multidrug efflux syst 97.2 0.0026 5.5E-08 41.5 6.6 41 14-54 55-95 (406)
54 TIGR00883 2A0106 metabolite-pr 97.1 0.011 2.4E-07 37.6 9.4 38 11-48 259-296 (394)
55 PRK10642 proline/glycine betai 97.1 0.0021 4.5E-08 43.2 6.2 39 18-56 68-106 (490)
56 PLN00028 nitrate transmembrane 97.1 0.0024 5.3E-08 42.8 6.5 42 13-54 77-118 (476)
57 PRK03893 putative sialic acid 97.1 0.0026 5.6E-08 42.4 6.5 45 11-55 59-103 (496)
58 TIGR00886 2A0108 nitrite extru 97.1 0.0046 9.9E-08 39.4 7.4 44 11-54 265-308 (366)
59 TIGR00711 efflux_EmrB drug res 97.1 0.0069 1.5E-07 40.1 8.3 47 9-55 293-339 (485)
60 PRK09528 lacY galactoside perm 97.1 0.0032 7E-08 41.3 6.6 39 9-47 48-86 (420)
61 PRK15075 citrate-proton sympor 97.1 0.011 2.4E-07 39.0 9.1 40 8-47 275-314 (434)
62 TIGR00887 2A0109 phosphate:H+ 97.1 0.0027 5.8E-08 42.8 6.2 45 11-55 60-104 (502)
63 PRK09556 uhpT sugar phosphate 97.1 0.007 1.5E-07 40.4 8.1 46 11-56 68-113 (467)
64 PRK03633 putative MFS family t 97.0 0.0034 7.3E-08 40.7 6.3 47 9-55 43-89 (381)
65 PRK11663 regulatory protein Uh 97.0 0.0024 5.2E-08 42.2 5.6 45 11-55 62-106 (434)
66 PRK11195 lysophospholipid tran 97.0 0.0025 5.4E-08 41.7 5.6 40 13-52 44-83 (393)
67 PRK14995 methyl viologen resis 97.0 0.0048 1E-07 41.6 7.0 48 8-55 42-89 (495)
68 PRK09952 shikimate transporter 97.0 0.0031 6.7E-08 41.8 6.1 37 18-54 75-111 (438)
69 TIGR00892 2A0113 monocarboxyla 97.0 0.0041 9E-08 41.5 6.6 40 15-54 62-101 (455)
70 TIGR00896 CynX cyanate transpo 97.0 0.0039 8.6E-08 39.9 6.1 42 9-50 37-78 (355)
71 PRK11043 putative transporter; 97.0 0.0035 7.5E-08 40.8 5.9 42 11-52 45-86 (401)
72 TIGR00901 2A0125 AmpG-related 97.0 0.016 3.4E-07 37.1 8.7 38 18-55 256-293 (356)
73 PRK15075 citrate-proton sympor 96.9 0.0051 1.1E-07 40.7 6.6 35 21-55 70-104 (434)
74 PRK15034 nitrate/nitrite trans 96.9 0.018 4E-07 39.1 9.1 42 13-54 292-333 (462)
75 PRK10473 multidrug efflux syst 96.9 0.013 2.7E-07 38.1 7.9 44 12-55 244-287 (392)
76 PRK14995 methyl viologen resis 96.9 0.015 3.2E-07 39.3 8.4 43 13-55 301-343 (495)
77 KOG0255|consensus 96.9 0.0036 7.8E-08 42.3 5.5 45 11-55 122-166 (521)
78 PRK09874 drug efflux system pr 96.9 0.0094 2E-07 38.6 7.3 40 15-54 62-101 (408)
79 PRK10504 putative transporter; 96.9 0.0062 1.3E-07 40.5 6.5 41 13-53 51-91 (471)
80 cd06174 MFS The Major Facilita 96.9 0.015 3.3E-07 36.4 8.0 47 9-55 213-260 (352)
81 PF00083 Sugar_tr: Sugar (and 96.9 1E-05 2.3E-10 53.1 -6.5 46 10-55 289-334 (451)
82 TIGR00883 2A0106 metabolite-pr 96.9 0.006 1.3E-07 38.9 6.2 35 21-55 49-83 (394)
83 PRK10406 alpha-ketoglutarate t 96.8 0.021 4.6E-07 37.7 8.8 35 13-47 285-319 (432)
84 PRK09584 tppB putative tripept 96.8 0.022 4.9E-07 38.7 8.9 35 21-55 71-106 (500)
85 PRK11551 putative 3-hydroxyphe 96.8 0.03 6.5E-07 36.4 9.1 45 9-53 257-301 (406)
86 PRK12307 putative sialic acid 96.8 0.027 5.9E-07 36.8 9.0 39 13-51 272-310 (426)
87 PF05977 MFS_3: Transmembrane 96.8 0.02 4.4E-07 39.4 8.6 41 17-57 55-95 (524)
88 PRK11102 bicyclomycin/multidru 96.8 0.021 4.5E-07 36.7 8.2 38 11-48 234-271 (377)
89 PRK09556 uhpT sugar phosphate 96.8 0.02 4.4E-07 38.3 8.3 37 9-45 296-332 (467)
90 PRK11646 multidrug resistance 96.8 0.007 1.5E-07 39.7 6.0 39 17-55 56-94 (400)
91 PRK08633 2-acyl-glycerophospho 96.7 0.013 2.9E-07 42.9 7.9 36 16-51 56-91 (1146)
92 PRK03893 putative sialic acid 96.7 0.019 4.2E-07 38.3 8.2 40 11-50 315-354 (496)
93 KOG2615|consensus 96.7 0.0057 1.2E-07 40.9 5.4 42 16-57 77-118 (451)
94 TIGR00903 2A0129 major facilit 96.7 0.0086 1.9E-07 39.1 6.3 34 12-45 31-64 (368)
95 TIGR00712 glpT glycerol-3-phos 96.7 0.0028 6.1E-08 41.9 4.1 47 8-54 62-108 (438)
96 TIGR00889 2A0110 nucleoside tr 96.7 0.023 5.1E-07 37.6 8.3 45 11-55 255-299 (418)
97 TIGR00710 efflux_Bcr_CflA drug 96.7 0.034 7.3E-07 35.6 8.7 44 12-55 247-290 (385)
98 TIGR00891 2A0112 putative sial 96.7 0.028 6.1E-07 36.1 8.4 37 11-47 278-314 (405)
99 TIGR00899 2A0120 sugar efflux 96.7 0.011 2.4E-07 37.8 6.4 29 15-43 41-69 (375)
100 TIGR01301 GPH_sucrose GPH fami 96.7 0.0037 8.1E-08 42.5 4.4 48 8-55 40-92 (477)
101 KOG0253|consensus 96.7 0.014 3E-07 39.3 6.8 47 10-56 384-430 (528)
102 TIGR00900 2A0121 H+ Antiporter 96.6 0.033 7.1E-07 35.2 8.4 45 11-55 251-295 (365)
103 TIGR00899 2A0120 sugar efflux 96.6 0.026 5.6E-07 36.1 7.8 34 17-50 245-278 (375)
104 PRK10091 MFS transport protein 96.6 0.017 3.6E-07 37.6 6.9 46 9-54 237-282 (382)
105 PF06609 TRI12: Fungal trichot 96.5 0.039 8.5E-07 38.7 8.5 49 8-56 79-127 (599)
106 PRK03699 putative transporter; 96.5 0.056 1.2E-06 35.3 8.8 39 12-50 246-284 (394)
107 TIGR00897 2A0118 polyol permea 96.5 0.066 1.4E-06 35.1 9.1 31 11-41 261-291 (402)
108 COG3104 PTR2 Dipeptide/tripept 96.5 0.018 4E-07 39.4 6.6 55 2-57 57-112 (498)
109 PF13347 MFS_2: MFS/sugar tran 96.4 0.03 6.5E-07 37.0 7.4 46 12-57 265-310 (428)
110 TIGR00894 2A0114euk Na(+)-depe 96.4 0.032 6.9E-07 37.1 7.6 39 15-53 84-122 (465)
111 PRK11128 putative 3-phenylprop 96.4 0.046 1E-06 35.5 8.1 40 15-54 248-287 (382)
112 TIGR00895 2A0115 benzoate tran 96.4 0.062 1.4E-06 34.3 8.6 35 9-43 287-321 (398)
113 KOG0254|consensus 96.4 0.024 5.2E-07 38.5 6.8 46 11-56 93-138 (513)
114 PRK15011 sugar efflux transpor 96.3 0.057 1.2E-06 35.2 8.3 33 16-48 261-293 (393)
115 PRK11010 ampG muropeptide tran 96.3 0.052 1.1E-06 36.8 8.0 36 17-52 269-304 (491)
116 TIGR00792 gph sugar (Glycoside 96.2 0.093 2E-06 34.4 8.9 41 14-54 264-304 (437)
117 COG2211 MelB Na+/melibiose sym 96.2 0.093 2E-06 35.8 8.9 45 11-55 276-320 (467)
118 COG2814 AraJ Arabinose efflux 96.2 0.071 1.5E-06 35.7 8.1 53 2-56 243-295 (394)
119 PRK09528 lacY galactoside perm 96.2 0.071 1.5E-06 35.0 8.2 40 16-55 271-310 (420)
120 PRK10504 putative transporter; 96.1 0.081 1.7E-06 35.2 8.3 40 16-55 306-345 (471)
121 PRK09705 cynX putative cyanate 96.1 0.04 8.6E-07 36.1 6.7 44 9-52 242-285 (393)
122 PRK10489 enterobactin exporter 96.1 0.016 3.5E-07 37.9 4.9 43 12-54 57-99 (417)
123 PRK10133 L-fucose transporter; 96.1 0.039 8.4E-07 36.8 6.7 40 11-50 299-338 (438)
124 PRK15402 multidrug efflux syst 96.1 0.13 2.9E-06 33.5 8.9 40 17-56 261-300 (406)
125 TIGR01272 gluP glucose/galacto 96.0 0.06 1.3E-06 34.4 7.0 43 9-51 180-222 (310)
126 PRK11902 ampG muropeptide tran 96.0 0.09 1.9E-06 34.4 7.9 34 19-52 258-291 (402)
127 PRK03633 putative MFS family t 95.9 0.044 9.5E-07 35.6 6.3 37 13-49 241-277 (381)
128 TIGR00896 CynX cyanate transpo 95.9 0.058 1.3E-06 34.5 6.7 43 9-51 234-277 (355)
129 PRK09848 glucuronide transport 95.9 0.12 2.5E-06 34.4 8.3 37 18-54 275-311 (448)
130 PRK05122 major facilitator sup 95.9 0.15 3.2E-06 33.1 8.5 42 14-55 256-297 (399)
131 PF11700 ATG22: Vacuole efflux 95.8 0.15 3.3E-06 34.8 8.7 45 2-47 313-359 (477)
132 PRK03545 putative arabinose tr 95.8 0.2 4.2E-06 32.6 8.9 33 10-42 244-276 (390)
133 TIGR00889 2A0110 nucleoside tr 95.8 0.066 1.4E-06 35.5 6.6 43 8-50 39-82 (418)
134 TIGR00902 2A0127 phenyl propri 95.8 0.14 2.9E-06 33.4 8.0 41 15-55 248-288 (382)
135 PLN00028 nitrate transmembrane 95.7 0.12 2.5E-06 34.9 7.7 30 8-37 289-318 (476)
136 PRK10429 melibiose:sodium symp 95.7 0.22 4.8E-06 33.5 9.0 39 15-53 274-312 (473)
137 PRK15034 nitrate/nitrite trans 95.7 0.066 1.4E-06 36.5 6.5 44 12-55 75-118 (462)
138 KOG1330|consensus 95.7 0.018 4E-07 39.2 3.7 48 8-55 69-116 (493)
139 PRK09874 drug efflux system pr 95.6 0.16 3.5E-06 32.9 7.9 36 17-52 268-303 (408)
140 PRK09669 putative symporter Ya 95.6 0.26 5.5E-06 32.8 8.9 33 17-49 274-306 (444)
141 PRK11902 ampG muropeptide tran 95.6 0.16 3.5E-06 33.2 7.8 35 21-55 46-86 (402)
142 COG2223 NarK Nitrate/nitrite t 95.5 0.2 4.4E-06 33.8 7.9 47 11-57 258-304 (417)
143 PRK11043 putative transporter; 95.5 0.35 7.5E-06 31.5 9.1 37 16-52 247-283 (401)
144 KOG0569|consensus 95.4 0.13 2.8E-06 35.3 6.9 40 16-55 69-108 (485)
145 PTZ00207 hypothetical protein; 95.4 0.092 2E-06 36.8 6.3 35 23-57 77-111 (591)
146 TIGR00882 2A0105 oligosacchari 95.3 0.3 6.6E-06 31.8 8.3 38 16-53 263-300 (396)
147 TIGR00885 fucP L-fucose:H+ sym 95.2 0.41 9E-06 31.7 8.9 38 18-55 280-317 (410)
148 PRK12382 putative transporter; 95.2 0.19 4.2E-06 32.6 7.2 40 15-54 257-296 (392)
149 PF05631 DUF791: Protein of un 95.1 0.14 3E-06 33.8 6.2 33 18-50 80-112 (354)
150 COG2814 AraJ Arabinose efflux 95.0 0.18 3.8E-06 33.8 6.6 46 11-56 52-97 (394)
151 PRK06814 acylglycerophosphoeth 94.9 0.29 6.3E-06 36.3 8.0 27 16-42 61-87 (1140)
152 PF00083 Sugar_tr: Sugar (and 94.8 0.0016 3.5E-08 42.9 -3.2 44 12-55 51-94 (451)
153 PF03825 Nuc_H_symport: Nucleo 94.8 0.49 1.1E-05 31.6 8.3 41 11-51 41-82 (400)
154 TIGR00893 2A0114 d-galactonate 94.7 0.35 7.5E-06 30.7 7.4 28 11-38 255-282 (399)
155 TIGR02718 sider_RhtX_FptX side 94.7 0.16 3.6E-06 33.0 5.9 29 19-47 256-284 (390)
156 PRK11462 putative transporter; 94.5 0.77 1.7E-05 31.0 8.9 33 15-47 271-303 (460)
157 PRK10489 enterobactin exporter 94.5 0.64 1.4E-05 30.5 8.3 43 12-54 264-306 (417)
158 TIGR00805 oat sodium-independe 94.3 0.02 4.4E-07 40.1 1.1 48 11-58 72-119 (633)
159 KOG3764|consensus 94.2 0.094 2E-06 35.5 4.0 43 15-57 114-156 (464)
160 TIGR02332 HpaX 4-hydroxyphenyl 94.0 0.29 6.3E-06 32.3 6.0 30 11-40 283-312 (412)
161 PRK10429 melibiose:sodium symp 94.0 0.24 5.2E-06 33.3 5.6 39 16-54 51-94 (473)
162 PF07690 MFS_1: Major Facilita 93.9 0.35 7.6E-06 30.4 6.1 43 13-55 249-291 (352)
163 TIGR00792 gph sugar (Glycoside 93.8 0.17 3.7E-06 33.2 4.6 42 13-54 41-87 (437)
164 TIGR00901 2A0125 AmpG-related 93.8 0.77 1.7E-05 29.4 7.5 31 24-54 38-74 (356)
165 COG2270 Permeases of the major 93.7 0.17 3.7E-06 34.3 4.4 46 2-48 284-329 (438)
166 TIGR00712 glpT glycerol-3-phos 93.4 1.4 2.9E-05 29.3 8.4 29 9-37 289-317 (438)
167 PF06813 Nodulin-like: Nodulin 93.4 0.94 2E-05 28.5 7.1 46 11-57 41-86 (250)
168 PF06779 DUF1228: Protein of u 93.3 0.65 1.4E-05 24.5 6.4 47 11-57 31-77 (85)
169 KOG3762|consensus 93.0 0.25 5.5E-06 34.7 4.5 49 2-51 42-90 (618)
170 PRK15011 sugar efflux transpor 92.9 0.62 1.3E-05 30.5 6.2 19 23-42 68-86 (393)
171 PRK08633 2-acyl-glycerophospho 92.9 0.6 1.3E-05 34.6 6.6 42 14-55 276-317 (1146)
172 PRK11010 ampG muropeptide tran 92.8 2.1 4.6E-05 29.2 9.0 34 22-55 60-99 (491)
173 KOG0252|consensus 92.8 0.04 8.6E-07 37.8 0.5 37 21-57 362-398 (538)
174 TIGR00806 rfc RFC reduced fola 92.6 0.79 1.7E-05 31.8 6.4 42 15-56 70-111 (511)
175 PRK10213 nepI ribonucleoside t 92.5 2 4.4E-05 28.2 8.8 28 11-38 256-283 (394)
176 TIGR00902 2A0127 phenyl propri 92.4 2 4.4E-05 28.0 8.6 28 11-38 43-70 (382)
177 PRK11128 putative 3-phenylprop 92.2 2.1 4.6E-05 27.8 8.5 27 11-37 43-69 (382)
178 KOG2504|consensus 92.1 0.75 1.6E-05 31.8 5.9 47 9-55 83-129 (509)
179 TIGR00894 2A0114euk Na(+)-depe 92.1 2.5 5.4E-05 28.2 9.1 27 11-37 301-327 (465)
180 PRK11273 glpT sn-glycerol-3-ph 92.0 2.6 5.5E-05 28.2 8.7 28 12-39 294-323 (452)
181 COG0738 FucP Fucose permease [ 92.0 1.6 3.5E-05 29.6 7.1 48 8-55 49-96 (422)
182 KOG2563|consensus 91.9 0.82 1.8E-05 31.4 5.7 49 8-56 80-128 (480)
183 TIGR00881 2A0104 phosphoglycer 91.6 1.8 3.9E-05 27.4 7.0 27 9-35 254-280 (379)
184 PRK09669 putative symporter Ya 91.1 0.33 7.1E-06 32.3 3.4 37 16-52 54-95 (444)
185 PRK09848 glucuronide transport 91.0 0.91 2E-05 30.2 5.3 39 12-50 49-92 (448)
186 PF11700 ATG22: Vacuole efflux 90.4 4.3 9.4E-05 27.9 8.7 38 11-48 74-111 (477)
187 COG2223 NarK Nitrate/nitrite t 90.3 1.8 3.8E-05 29.4 6.1 53 3-56 46-98 (417)
188 PRK11663 regulatory protein Uh 90.1 4.1 8.8E-05 27.1 8.3 25 10-34 282-306 (434)
189 KOG2532|consensus 89.8 3.8 8.2E-05 28.2 7.5 34 2-36 290-323 (466)
190 PF05978 UNC-93: Ion channel r 89.6 2.8 6E-05 24.5 7.1 40 10-49 40-79 (156)
191 KOG2532|consensus 89.5 3.4 7.4E-05 28.4 7.1 41 17-57 83-123 (466)
192 PRK11195 lysophospholipid tran 89.3 3.9 8.5E-05 26.9 7.2 34 11-44 245-278 (393)
193 PF13347 MFS_2: MFS/sugar tran 89.2 0.078 1.7E-06 35.1 -0.8 38 18-55 48-90 (428)
194 PF01306 LacY_symp: LacY proto 88.1 0.85 1.8E-05 30.8 3.5 33 12-44 48-80 (412)
195 KOG0255|consensus 88.0 4.5 9.7E-05 27.6 7.0 49 9-57 352-400 (521)
196 TIGR00926 2A1704 Peptide:H+ sy 87.8 3.6 7.8E-05 29.5 6.6 41 16-56 32-73 (654)
197 TIGR00788 fbt folate/biopterin 87.2 4.7 0.0001 27.4 6.6 51 2-53 284-334 (468)
198 TIGR00892 2A0113 monocarboxyla 87.1 7.2 0.00016 26.3 8.4 23 11-33 280-302 (455)
199 PF05977 MFS_3: Transmembrane 87.1 8 0.00017 27.0 7.8 42 15-56 262-303 (524)
200 KOG4686|consensus 85.7 4.1 8.9E-05 27.1 5.5 29 16-44 309-337 (459)
201 COG2271 UhpC Sugar phosphate p 85.0 10 0.00022 26.1 8.0 45 8-52 289-336 (448)
202 PRK11462 putative transporter; 84.7 7.7 0.00017 26.3 6.7 35 20-54 58-97 (460)
203 COG2271 UhpC Sugar phosphate p 84.7 5.7 0.00012 27.3 5.9 41 17-57 74-114 (448)
204 TIGR00788 fbt folate/biopterin 84.2 11 0.00023 25.7 7.3 23 25-47 78-105 (468)
205 COG0477 ProP Permeases of the 83.7 6.3 0.00014 23.5 5.6 35 12-46 44-78 (338)
206 PRK10054 putative transporter; 83.6 4 8.6E-05 26.9 4.9 32 23-54 260-291 (395)
207 PF03209 PUCC: PUCC protein; 81.2 15 0.00032 25.1 8.5 55 2-57 240-295 (403)
208 KOG2816|consensus 80.1 7.2 0.00016 26.9 5.2 38 17-54 72-109 (463)
209 PF03825 Nuc_H_symport: Nucleo 79.6 13 0.00029 24.9 6.3 35 9-43 340-374 (400)
210 PRK11652 emrD multidrug resist 79.3 15 0.00032 23.9 8.5 17 21-37 253-269 (394)
211 PF09605 Trep_Strep: Hypotheti 79.2 11 0.00025 22.6 6.7 43 13-55 34-76 (186)
212 PF01306 LacY_symp: LacY proto 79.0 18 0.00038 24.7 6.9 39 18-56 270-308 (412)
213 KOG2533|consensus 75.8 8.2 0.00018 26.8 4.6 39 8-46 310-352 (495)
214 KOG0253|consensus 74.8 4.1 8.8E-05 28.0 2.9 36 16-51 122-157 (528)
215 PRK06814 acylglycerophosphoeth 74.2 22 0.00048 26.8 6.7 41 12-52 266-306 (1140)
216 PRK10207 dipeptide/tripeptide 73.9 26 0.00056 24.1 8.3 44 12-55 314-364 (489)
217 PF13000 Acatn: Acetyl-coenzym 72.0 5.8 0.00013 27.9 3.1 32 27-58 60-92 (544)
218 TIGR01301 GPH_sucrose GPH fami 71.4 30 0.00065 24.0 6.4 41 15-55 313-354 (477)
219 TIGR00805 oat sodium-independe 70.3 12 0.00026 26.7 4.5 35 19-53 379-415 (633)
220 PF06898 YqfD: Putative stage 68.7 6.2 0.00013 26.5 2.7 33 28-60 78-110 (385)
221 TIGR02876 spore_yqfD sporulati 68.2 6.7 0.00014 26.3 2.8 32 28-59 75-106 (382)
222 PF07698 7TM-7TMR_HD: 7TM rece 66.5 25 0.00054 20.9 7.4 40 18-57 108-147 (194)
223 PF01788 PsbJ: PsbJ; InterPro 65.0 12 0.00026 16.8 3.2 28 31-58 2-29 (40)
224 COG3086 RseC Positive regulato 64.2 27 0.00058 20.5 7.2 43 1-44 67-109 (150)
225 KOG4332|consensus 61.9 5.2 0.00011 26.4 1.4 26 13-39 79-104 (454)
226 PF09788 Tmemb_55A: Transmembr 60.8 33 0.00072 22.0 4.6 23 33-55 192-214 (256)
227 PF03092 BT1: BT1 family; Int 60.5 50 0.0011 22.4 7.0 48 9-56 24-78 (433)
228 PF13493 DUF4118: Domain of un 60.4 18 0.00039 19.1 3.2 22 16-37 84-105 (105)
229 PF05546 She9_MDM33: She9 / Md 59.7 25 0.00054 21.8 3.9 31 10-40 152-182 (207)
230 KOG2504|consensus 59.7 58 0.0013 22.8 7.8 49 2-51 329-379 (509)
231 PF06963 FPN1: Ferroportin1 (F 59.2 56 0.0012 22.5 8.1 44 14-57 300-343 (432)
232 TIGR00769 AAA ADP/ATP carrier 58.8 59 0.0013 22.7 7.5 39 21-59 58-96 (472)
233 TIGR02185 Trep_Strep conserved 56.2 43 0.00093 20.2 5.6 36 15-50 38-73 (189)
234 COG1470 Predicted membrane pro 54.6 14 0.00031 25.7 2.5 10 28-37 504-513 (513)
235 KOG3098|consensus 54.3 72 0.0016 22.3 6.8 43 9-51 52-94 (461)
236 COG2270 Permeases of the major 49.3 88 0.0019 21.8 8.1 43 13-55 64-107 (438)
237 COG0109 CyoE Polyprenyltransfe 47.9 73 0.0016 21.0 4.8 42 37-86 99-140 (304)
238 PF06609 TRI12: Fungal trichot 47.8 1.1E+02 0.0023 22.3 8.4 37 13-49 355-392 (599)
239 KOG0637|consensus 45.4 4.8 0.0001 28.0 -0.7 38 18-55 78-120 (498)
240 COG3238 Uncharacterized protei 44.8 47 0.001 19.5 3.3 21 22-42 81-101 (150)
241 PRK11646 multidrug resistance 44.6 91 0.002 20.6 8.3 28 27-54 264-291 (400)
242 KOG1330|consensus 44.4 84 0.0018 22.2 4.9 33 3-36 280-312 (493)
243 KOG3762|consensus 43.9 31 0.00068 24.8 2.9 41 17-57 506-546 (618)
244 KOG3574|consensus 43.0 22 0.00047 24.7 2.0 28 28-55 84-117 (510)
245 COG4708 Predicted membrane pro 42.7 63 0.0014 19.1 3.6 21 17-37 144-164 (169)
246 PF02659 DUF204: Domain of unk 40.9 46 0.001 16.2 6.0 21 12-32 25-45 (67)
247 PF12670 DUF3792: Protein of u 39.7 67 0.0015 17.7 9.2 46 11-56 38-84 (116)
248 PF09584 Phageshock_PspD: Phag 39.6 46 0.00099 16.7 2.4 22 19-40 21-42 (66)
249 TIGR02979 phageshock_pspD phag 39.4 33 0.00071 16.8 1.8 21 20-40 17-37 (59)
250 TIGR02230 ATPase_gene1 F0F1-AT 38.1 70 0.0015 17.4 6.7 32 20-51 56-87 (100)
251 COG2807 CynX Cyanate permease 37.5 1.4E+02 0.003 20.6 6.1 53 2-55 239-292 (395)
252 PRK09584 tppB putative tripept 36.6 1.4E+02 0.0031 20.6 9.6 47 11-57 320-370 (500)
253 PF11460 DUF3007: Protein of u 35.8 52 0.0011 18.1 2.4 19 37-55 4-22 (104)
254 KOG4830|consensus 35.7 34 0.00074 22.6 2.0 11 29-39 83-93 (412)
255 TIGR02840 spore_YtaF putative 35.6 1.1E+02 0.0023 18.8 5.5 28 8-35 155-182 (206)
256 COG0738 FucP Fucose permease [ 33.0 1.7E+02 0.0037 20.4 8.3 38 8-45 273-310 (422)
257 PRK11469 hypothetical protein; 31.9 1.2E+02 0.0026 18.3 6.5 40 8-47 132-175 (188)
258 PRK10497 peripheral inner memb 31.2 66 0.0014 16.5 2.2 21 20-40 29-49 (73)
259 PF03137 OATP: Organic Anion T 30.3 17 0.00037 25.5 0.0 49 8-56 39-87 (539)
260 TIGR00807 malonate_madL malona 30.1 95 0.0021 17.6 2.9 10 46-55 101-110 (125)
261 PF10518 TAT_signal: TAT (twin 29.8 49 0.0011 13.1 2.7 17 33-49 1-17 (26)
262 PRK15403 multidrug efflux syst 29.7 1.7E+02 0.0037 19.4 8.4 22 17-38 264-286 (413)
263 COG2807 CynX Cyanate permease 27.2 2.1E+02 0.0046 19.7 5.7 38 12-49 52-89 (395)
264 PF05232 BTP: Bacterial Transm 26.1 98 0.0021 15.4 3.1 15 18-32 16-30 (67)
265 PF03817 MadL: Malonate transp 25.7 1.1E+02 0.0025 17.3 2.7 17 39-55 94-110 (125)
266 PF06795 Erythrovirus_X: Eryth 24.8 1.1E+02 0.0023 15.4 2.8 20 24-43 46-65 (81)
267 PF11947 DUF3464: Protein of u 24.7 1.6E+02 0.0035 17.4 5.2 16 29-44 56-71 (153)
268 TIGR00903 2A0129 major facilit 23.8 2.2E+02 0.0048 18.7 8.1 20 18-37 234-253 (368)
269 KOG2325|consensus 23.8 2.7E+02 0.0059 19.8 5.3 44 13-56 77-121 (488)
270 PF05493 ATP_synt_H: ATP synth 23.8 1.1E+02 0.0024 15.2 2.4 37 25-61 15-51 (65)
271 COG3913 SciT Uncharacterized p 23.5 35 0.00076 21.2 0.5 16 30-45 80-95 (227)
272 PF01169 UPF0016: Uncharacteri 23.4 1.2E+02 0.0026 15.5 5.8 6 29-34 23-28 (78)
273 PF09716 ETRAMP: Malarial earl 22.7 1.3E+02 0.0028 15.7 3.1 23 32-54 48-70 (84)
274 PF09527 ATPase_gene1: Putativ 20.8 1.1E+02 0.0024 14.2 5.9 30 21-50 15-44 (55)
275 KOG4006|consensus 20.6 90 0.002 20.6 1.9 25 20-44 6-30 (311)
276 PRK11114 cellulose synthase re 20.1 2.1E+02 0.0045 21.4 3.8 30 9-38 724-753 (756)
No 1
>KOG0569|consensus
Probab=99.18 E-value=1.6e-10 Score=77.21 Aligned_cols=84 Identities=31% Similarity=0.545 Sum_probs=69.7
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCccccchHHHHHHHH
Q psy7928 1 MGHGVLWNPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYYFYLKNSGSDVSNIGWLPLGSLCV 80 (87)
Q Consensus 1 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (87)
+|++.+ ++..++...+.++++.++++.+++||+|||++++.+..++.++.+++.......+.. ..+..|..+++.++
T Consensus 300 aG~~~~-~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~--~~~~~y~~i~~~~~ 376 (485)
T KOG0569|consen 300 AGFTPE-EAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSF--GSWLSYLCIAAIFL 376 (485)
T ss_pred cCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHH
Confidence 366776 788999999999999999999999999999999999999999999988765444321 14556677888999
Q ss_pred HHHHhcC
Q psy7928 81 FIIVFSL 87 (87)
Q Consensus 81 ~~~~~~~ 87 (87)
|.++|++
T Consensus 377 ~~~~f~~ 383 (485)
T KOG0569|consen 377 FIISFAI 383 (485)
T ss_pred HHHhhhc
Confidence 9988864
No 2
>KOG0254|consensus
Probab=98.94 E-value=1.7e-08 Score=67.75 Aligned_cols=77 Identities=34% Similarity=0.553 Sum_probs=64.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHHhhcccCCC-CccccchHHHHHHHHHHHHhc
Q psy7928 10 NLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYYFYLKNSGS-DVSNIGWLPLGSLCVFIIVFS 86 (87)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 86 (87)
...+.+.++++.+++.++.+++||+|||++++.+..++.+++..++........+. ......+..+.++++|...|+
T Consensus 332 ~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~ 409 (513)
T KOG0254|consen 332 FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFA 409 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHh
Confidence 77888899999999999999999999999999999999999999998765443321 244678888999999888875
No 3
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.06 E-value=0.00011 Score=48.66 Aligned_cols=50 Identities=38% Similarity=0.520 Sum_probs=40.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
+........+....++.+++.++.||+|||++++.+...+.++...++..
T Consensus 307 ~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~ 356 (479)
T PRK10077 307 IALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTA 356 (479)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHH
Confidence 34455556677888999999999999999999999998888887776543
No 4
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.74 E-value=0.00091 Score=43.57 Aligned_cols=49 Identities=41% Similarity=0.674 Sum_probs=38.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
+.............++.++++++.||+|||+.+..+...+.+++..+..
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 368 (481)
T TIGR00879 320 HAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGI 368 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 3445556667778889999999999999999998887777777666653
No 5
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.54 E-value=0.0013 Score=46.86 Aligned_cols=46 Identities=15% Similarity=0.321 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 10 NLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
...+.+.++..+++.++++++.||+|||++++.+....+++.++++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~ 643 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLS 643 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 3445566788899999999999999999999988888777766655
No 6
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.53 E-value=0.0015 Score=44.04 Aligned_cols=41 Identities=20% Similarity=0.442 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 17 GTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 17 ~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
.....++.+++.++.||+|||++++.+...+.+++.+++..
T Consensus 345 ~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~ 385 (502)
T TIGR00887 345 LAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFA 385 (502)
T ss_pred HHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 34455677788899999999999998888888777666543
No 7
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.51 E-value=0.00081 Score=42.64 Aligned_cols=49 Identities=16% Similarity=0.335 Sum_probs=37.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
+.-...........++.++.+++.||+|||+.++.+.....++......
T Consensus 31 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 79 (379)
T TIGR00881 31 DLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGF 79 (379)
T ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHH
Confidence 3344555666777888899999999999999999988877777665543
No 8
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=97.50 E-value=0.00094 Score=42.06 Aligned_cols=47 Identities=23% Similarity=0.279 Sum_probs=35.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
+.............+..+..+++.||+|||+.++.+.....+.....
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~ 79 (352)
T PF07690_consen 33 QIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLL 79 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHh
Confidence 34455556667788899999999999999999999888888774333
No 9
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.49 E-value=0.0017 Score=41.20 Aligned_cols=44 Identities=18% Similarity=0.139 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
...........++.+..+++.||+|||+.+..+.....+....+
T Consensus 244 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 287 (377)
T TIGR00890 244 LAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAM 287 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 44455667788889999999999999999888777666665444
No 10
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=97.48 E-value=0.0016 Score=41.17 Aligned_cols=46 Identities=20% Similarity=0.255 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
...........+..+..+.+.||+|||+.++.+.....+.......
T Consensus 38 ~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 38 LAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 3344455667778888899999999999999887766665554443
No 11
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=97.48 E-value=0.00084 Score=43.13 Aligned_cols=47 Identities=19% Similarity=0.200 Sum_probs=34.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
+.-...........++.++.+++.||+|||+.++.+.....+.....
T Consensus 48 ~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~ 94 (405)
T TIGR00891 48 DAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLAC 94 (405)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 33345555667778888999999999999999988876665554443
No 12
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.48 E-value=0.00071 Score=44.83 Aligned_cols=44 Identities=23% Similarity=0.308 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
...........+++++.+++.||+|||++++.+.....++....
T Consensus 59 ~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~ 102 (479)
T PRK10077 59 FCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGS 102 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 44445567778888999999999999999999877766554433
No 13
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.47 E-value=0.00067 Score=43.24 Aligned_cols=46 Identities=22% Similarity=0.243 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 10 NLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
............++.++.+++.||+|||+.++.+.....+.....+
T Consensus 40 ~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~ 85 (366)
T TIGR00886 40 GNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAG 85 (366)
T ss_pred hHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 3444556677788889999999999999999988877776655544
No 14
>TIGR00893 2A0114 d-galactonate transporter.
Probab=97.45 E-value=0.0012 Score=41.93 Aligned_cols=48 Identities=21% Similarity=0.120 Sum_probs=36.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
+.-...........++.++.+++.||+|||+.+..+.....+.....+
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~ 77 (399)
T TIGR00893 30 QYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQA 77 (399)
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHH
Confidence 344555566777888899999999999999999888776666655544
No 15
>KOG0252|consensus
Probab=97.44 E-value=0.0013 Score=44.71 Aligned_cols=45 Identities=16% Similarity=0.180 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
.......+-...+++..+++-||+|||+.+......+.++..+.+
T Consensus 88 ~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~ 132 (538)
T KOG0252|consen 88 LVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSG 132 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhc
Confidence 455566777888999999999999999999999998888877444
No 16
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=97.44 E-value=0.00072 Score=42.33 Aligned_cols=47 Identities=26% Similarity=0.415 Sum_probs=36.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
.............+..++.+++.||+|||+.+..+.....+......
T Consensus 36 ~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 36 AGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 33455556677888899999999999999999888877776665544
No 17
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.42 E-value=0.00074 Score=45.94 Aligned_cols=47 Identities=17% Similarity=0.388 Sum_probs=35.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhh-chhHHHHHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRL-GRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~-gRr~~l~~~~~~~~~~~~~~ 54 (87)
++............+..++++++.||+ |||+.++.+...+.+....+
T Consensus 46 ~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll 93 (493)
T PRK15462 46 HAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVL 93 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHH
Confidence 444455555677788888999999999 99999988887776665444
No 18
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.42 E-value=0.0025 Score=41.57 Aligned_cols=44 Identities=25% Similarity=0.375 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
...........++.++.+++.||+|||+.++.+.....+.....
T Consensus 75 ~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~ 118 (481)
T TIGR00879 75 LVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILM 118 (481)
T ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 44445667778888899999999999999988877766665554
No 19
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=97.40 E-value=0.0017 Score=43.12 Aligned_cols=47 Identities=19% Similarity=0.248 Sum_probs=35.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
.............+++++.+++.||+|||++++.+.....+....++
T Consensus 65 ~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~ 111 (452)
T PRK11273 65 LGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMG 111 (452)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHH
Confidence 33444555666778888999999999999999998877776665554
No 20
>PRK12382 putative transporter; Provisional
Probab=97.39 E-value=0.00077 Score=43.66 Aligned_cols=40 Identities=18% Similarity=0.119 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALS 50 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~ 50 (87)
...........+.+++.+++.||+|||++++.+.....++
T Consensus 55 ~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (392)
T PRK12382 55 IAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLA 94 (392)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHH
Confidence 3344455666778888999999999999998876654443
No 21
>TIGR00895 2A0115 benzoate transport.
Probab=97.38 E-value=0.002 Score=41.19 Aligned_cols=45 Identities=22% Similarity=0.202 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
...........++.++.+++.||+|||+.+..+.....+......
T Consensus 56 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 100 (398)
T TIGR00895 56 FLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCA 100 (398)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 334445566788888899999999999999988877776655544
No 22
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=97.38 E-value=0.00053 Score=44.45 Aligned_cols=40 Identities=20% Similarity=0.115 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALS 50 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~ 50 (87)
...........+.+++.+.+.||+|||++++.+.....++
T Consensus 55 ~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 55 LVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 3444555667788888999999999999999887655544
No 23
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.38 E-value=0.00059 Score=43.23 Aligned_cols=46 Identities=9% Similarity=0.233 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 10 NLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
-...........++.+..+.+.||+|||+.+..+.....+.....+
T Consensus 41 g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~ 86 (377)
T TIGR00890 41 AIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYA 86 (377)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHH
Confidence 3444455667778888899999999999999888776666554443
No 24
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=97.36 E-value=0.0022 Score=41.17 Aligned_cols=47 Identities=13% Similarity=0.192 Sum_probs=36.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
......+......++.++.+++.||+|||+.+..+.....+....+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~ 74 (377)
T PRK11102 28 VQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACA 74 (377)
T ss_pred HHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHH
Confidence 33444556666778888999999999999999998877777666554
No 25
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.36 E-value=0.0012 Score=43.05 Aligned_cols=46 Identities=17% Similarity=0.157 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 10 NLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
............++.++.+++.||+|||+.+..+.....++....+
T Consensus 56 ~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~ 101 (426)
T PRK12307 56 AFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSG 101 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 3445556677788888999999999999999988877766655443
No 26
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=97.36 E-value=0.00091 Score=43.66 Aligned_cols=46 Identities=15% Similarity=0.151 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
...........++.+..+++.||+|||+++..+.....++....+.
T Consensus 48 ~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~ 93 (393)
T PRK09705 48 LLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMREL 93 (393)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 3344445667778888999999999999999999988888776654
No 27
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=97.34 E-value=0.0015 Score=43.32 Aligned_cols=47 Identities=17% Similarity=0.218 Sum_probs=37.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
+.............++.++.+++.||+|||+.++.+.....+.....
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 84 (485)
T TIGR00711 38 QVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLC 84 (485)
T ss_pred hhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 44455666777888889999999999999999998887776665544
No 28
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.33 E-value=0.0011 Score=34.28 Aligned_cols=44 Identities=16% Similarity=0.311 Sum_probs=34.3
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHH
Q psy7928 2 GHGVLWNPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVI 46 (87)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~ 46 (87)
|++.. +.-....+...+.+++.++.+.+.||.+||+..+.....
T Consensus 31 Gl~~~-~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 31 GLSPS-QIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred CCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 44554 555667777888999999999999999999987765543
No 29
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=97.32 E-value=0.0013 Score=43.00 Aligned_cols=45 Identities=9% Similarity=0.342 Sum_probs=34.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTL 52 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~ 52 (87)
+.-...........++.++.+.+.||+|||+++..+.....++..
T Consensus 49 ~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~ 93 (402)
T TIGR00897 49 QSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHA 93 (402)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 333444556677888899999999999999999888777666543
No 30
>PRK09952 shikimate transporter; Provisional
Probab=97.30 E-value=0.0041 Score=41.26 Aligned_cols=37 Identities=32% Similarity=0.490 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7928 14 IIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALS 50 (87)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~ 50 (87)
...+....++.++.+++.||+|||+.++.+.....++
T Consensus 293 ~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~ 329 (438)
T PRK09952 293 LLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLS 329 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 3445666777788899999999999888776554443
No 31
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=97.30 E-value=0.0013 Score=42.11 Aligned_cols=47 Identities=26% Similarity=0.307 Sum_probs=35.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
.-...........++.++.+++.||+|||+.+..+.....+......
T Consensus 42 ~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~ 88 (385)
T TIGR00710 42 VQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLA 88 (385)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 33444555666778888899999999999999888776666655543
No 32
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.29 E-value=0.0035 Score=42.22 Aligned_cols=48 Identities=10% Similarity=0.221 Sum_probs=37.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhh-hchhHHHHHHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDR-LGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~-~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
+.-...........++.+.++++.|| +|||+.+..+.....+....++
T Consensus 49 ~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~ 97 (475)
T TIGR00924 49 QAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLA 97 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 33444555667788889999999999 8999999999888877766554
No 33
>TIGR00898 2A0119 cation transport protein.
Probab=97.29 E-value=0.0051 Score=41.18 Aligned_cols=47 Identities=26% Similarity=0.399 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
........+....++.+++.++.||+|||+.+..+.....++.+.+.
T Consensus 357 ~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~ 403 (505)
T TIGR00898 357 IYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLL 403 (505)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 34455566777888889999999999999999988877777765554
No 34
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.28 E-value=0.0017 Score=42.54 Aligned_cols=44 Identities=20% Similarity=0.357 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
...........++.++.+.+.||+|||+.++.+.....+.....
T Consensus 59 ~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~ 102 (394)
T PRK10213 59 QSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLV 102 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHH
Confidence 33345566677888888999999999999999888777665544
No 35
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=97.26 E-value=0.0013 Score=42.62 Aligned_cols=43 Identities=21% Similarity=0.251 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 13 TIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
.........++.++.+++.||+|||+.++.+.....+......
T Consensus 44 ~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~ 86 (392)
T PRK10473 44 FSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 3344455677788899999999999999988776666654443
No 36
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=97.26 E-value=0.0014 Score=43.32 Aligned_cols=38 Identities=24% Similarity=0.475 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 17 GTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 17 ~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
.....+++++.+++.||+|||+.+..+.....+.....
T Consensus 73 ~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~ 110 (432)
T PRK10406 73 FLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVI 110 (432)
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 34445888889999999999999988887776555443
No 37
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.26 E-value=0.0036 Score=44.65 Aligned_cols=45 Identities=24% Similarity=0.315 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
....+..+...++.++.+++.||+|||+.++.+.....+..++.+
T Consensus 206 ~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~a 250 (742)
T TIGR01299 206 MLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSS 250 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 445556677888999999999999999999998766665554443
No 38
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.24 E-value=0.0016 Score=44.03 Aligned_cols=47 Identities=15% Similarity=0.256 Sum_probs=34.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhh-hchhHHHHHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDR-LGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~-~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
................++++++.|| +|||++++.+.....+....++
T Consensus 52 a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~ 99 (489)
T PRK10207 52 AFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTG 99 (489)
T ss_pred HHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHH
Confidence 3333344445566666789999999 9999999999887777665544
No 39
>PRK03699 putative transporter; Provisional
Probab=97.24 E-value=0.0039 Score=40.61 Aligned_cols=44 Identities=7% Similarity=0.209 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
...........++.++++++.||+|||+.+..+.....+.....
T Consensus 46 ~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~ 89 (394)
T PRK03699 46 NTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGL 89 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 33444556677888899999999999999888876665554433
No 40
>PRK03545 putative arabinose transporter; Provisional
Probab=97.24 E-value=0.0019 Score=41.96 Aligned_cols=40 Identities=18% Similarity=0.219 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 15 IVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 15 ~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
.......++.+..+.+.||+|||+++..+.....+.....
T Consensus 52 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 91 (390)
T PRK03545 52 IYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLS 91 (390)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHH
Confidence 3445556677778899999999999998877666665443
No 41
>PRK10133 L-fucose transporter; Provisional
Probab=97.23 E-value=0.0049 Score=41.04 Aligned_cols=46 Identities=11% Similarity=0.114 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
.-...........++.+..+.+.||+|||+.+..+.....+.....
T Consensus 63 ~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~ 108 (438)
T PRK10133 63 AGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALF 108 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 3344455667778888899999999999999999988877776554
No 42
>TIGR00898 2A0119 cation transport protein.
Probab=97.23 E-value=0.0014 Score=43.85 Aligned_cols=44 Identities=23% Similarity=0.378 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
...........++.++.+++.||+|||+.++.+.....++.+..
T Consensus 131 ~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~ 174 (505)
T TIGR00898 131 LTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLT 174 (505)
T ss_pred HHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 44455566778888889999999999999998877766665444
No 43
>PRK10091 MFS transport protein AraJ; Provisional
Probab=97.22 E-value=0.002 Score=41.81 Aligned_cols=45 Identities=11% Similarity=0.096 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
...........++.+..+++.||+|||+.+..+.....+.....+
T Consensus 42 ~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~ 86 (382)
T PRK10091 42 HMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFT 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHH
Confidence 445556777888899999999999999999998877776655443
No 44
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.22 E-value=0.0016 Score=42.87 Aligned_cols=40 Identities=28% Similarity=0.463 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 15 IVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 15 ~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
+......+++++.+.+.||+|||+.++.+.....++....
T Consensus 59 ~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 98 (413)
T PRK15403 59 LYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAAT 98 (413)
T ss_pred HHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 3445566778888999999999999988877666655443
No 45
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=97.22 E-value=0.0022 Score=41.74 Aligned_cols=39 Identities=15% Similarity=0.146 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIM 47 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~ 47 (87)
.-....+......+..+..+++.||+|||+.++.+....
T Consensus 40 ~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~ 78 (396)
T TIGR00882 40 TGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGL 78 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 334555667888889999999999999999887765443
No 46
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=97.21 E-value=0.0016 Score=42.33 Aligned_cols=44 Identities=20% Similarity=0.299 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHH
Q psy7928 10 NLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLT 53 (87)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~ 53 (87)
-...........++.++.+++.||+|||+.+..+.....+....
T Consensus 53 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 96 (406)
T PRK11551 53 GWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLA 96 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH
Confidence 34445556677888889999999999999999887666555443
No 47
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.21 E-value=0.0017 Score=42.07 Aligned_cols=44 Identities=25% Similarity=0.271 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
...........++.+..+++.||+|||+.++.+.....+.....
T Consensus 47 ~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 90 (394)
T PRK11652 47 AVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVA 90 (394)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 34445556677788888999999999999888876666554443
No 48
>PRK10054 putative transporter; Provisional
Probab=97.21 E-value=0.0017 Score=42.48 Aligned_cols=44 Identities=16% Similarity=0.227 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
...........+.++..+++.||+|||+.++.+.....+....+
T Consensus 47 ~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~ 90 (395)
T PRK10054 47 YAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI 90 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH
Confidence 33344456677888889999999999999888877666555444
No 49
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=97.18 E-value=0.0023 Score=42.07 Aligned_cols=45 Identities=9% Similarity=0.149 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
...........++++..+++.||+|||+.+..+.....+.....+
T Consensus 47 ~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~ 91 (412)
T TIGR02332 47 LAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATM 91 (412)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 334444556677778888999999999999888777666655544
No 50
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.18 E-value=0.007 Score=40.72 Aligned_cols=37 Identities=24% Similarity=0.435 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIM 47 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~ 47 (87)
.......+...++.+.++++.||+|||+.++.+....
T Consensus 290 ~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~ 326 (490)
T PRK10642 290 LIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVAL 326 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 3344445556777788899999999999887766543
No 51
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.18 E-value=0.0049 Score=33.54 Aligned_cols=39 Identities=28% Similarity=0.451 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 17 GTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 17 ~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
.....++.+...++.||+|||+.+..+.....+....+.
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~ 46 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFA 46 (141)
T ss_pred hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 345677788888999999999999888776666655443
No 52
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.16 E-value=0.0062 Score=40.25 Aligned_cols=45 Identities=13% Similarity=0.174 Sum_probs=35.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 10 NLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
-...........++.+..+++.||+|||+.++.+...+.+....+
T Consensus 41 g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~ 85 (410)
T TIGR00885 41 ALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLF 85 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 344455567778888889999999999999999988777776554
No 53
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=97.16 E-value=0.0026 Score=41.49 Aligned_cols=41 Identities=24% Similarity=0.421 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 14 IIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
........++.++.+.+.||+|||+.++.+.....++....
T Consensus 55 ~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 95 (406)
T PRK15402 55 TAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAI 95 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 34455667777888899999999999988876666554443
No 54
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.15 E-value=0.011 Score=37.64 Aligned_cols=38 Identities=26% Similarity=0.482 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMA 48 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~ 48 (87)
...........++.++..++.||+|||+.+........
T Consensus 259 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 296 (394)
T TIGR00883 259 LVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAA 296 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 44445567778888889999999999998775544433
No 55
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.14 E-value=0.0021 Score=43.22 Aligned_cols=39 Identities=31% Similarity=0.491 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 18 TIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 18 ~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
....++.++.+++.||+|||+++..+...+.++....+.
T Consensus 68 l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~ 106 (490)
T PRK10642 68 LIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGL 106 (490)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHh
Confidence 456678888999999999999999998877777665543
No 56
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.14 E-value=0.0024 Score=42.84 Aligned_cols=42 Identities=14% Similarity=0.056 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 13 TIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
.........++.++.+++.||+|||+.+..+.....+.....
T Consensus 77 ~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~ 118 (476)
T PLN00028 77 GIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCM 118 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 334455567788889999999999999888776666655443
No 57
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.13 E-value=0.0026 Score=42.39 Aligned_cols=45 Identities=22% Similarity=0.292 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
...........++.++.+++.||+|||++++.+.....+....++
T Consensus 59 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 103 (496)
T PRK03893 59 SLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACG 103 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 344445566778888999999999999999888776666555444
No 58
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.12 E-value=0.0046 Score=39.43 Aligned_cols=44 Identities=23% Similarity=0.246 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
...........++.++++++.||+|||+.+..+......+...+
T Consensus 265 ~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~ 308 (366)
T TIGR00886 265 AYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLV 308 (366)
T ss_pred HHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHH
Confidence 34445566677888888899999999987777665555544433
No 59
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=97.10 E-value=0.0069 Score=40.15 Aligned_cols=47 Identities=21% Similarity=0.268 Sum_probs=35.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
.-...........++.++++++.||+|||+++..+.....+....+.
T Consensus 293 ~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~ 339 (485)
T TIGR00711 293 AGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRA 339 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHh
Confidence 33444556677888889999999999999998888776666655444
No 60
>PRK09528 lacY galactoside permease; Reviewed
Probab=97.09 E-value=0.0032 Score=41.27 Aligned_cols=39 Identities=15% Similarity=0.104 Sum_probs=30.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIM 47 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~ 47 (87)
.-...........+..++.+++.||+|||+.++.+....
T Consensus 48 ~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~ 86 (420)
T PRK09528 48 TGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGL 86 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHH
Confidence 344555667788888999999999999999887754433
No 61
>PRK15075 citrate-proton symporter; Provisional
Probab=97.07 E-value=0.011 Score=39.04 Aligned_cols=40 Identities=30% Similarity=0.425 Sum_probs=29.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIM 47 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~ 47 (87)
+.............++.++++++.||+|||+.+..+....
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~ 314 (434)
T PRK15075 275 DSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLA 314 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 3444555566777888889999999999999887764433
No 62
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.07 E-value=0.0027 Score=42.79 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
...........++.++.+++.||+|||+.+..+.....++....+
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~ 104 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASG 104 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 445556677788899999999999999999888776666654443
No 63
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=97.06 E-value=0.007 Score=40.42 Aligned_cols=46 Identities=13% Similarity=0.115 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
...........++.++.+++.||+|||+++..+....++....++.
T Consensus 68 ~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~ 113 (467)
T PRK09556 68 MIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGA 113 (467)
T ss_pred HHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHH
Confidence 3334445666778888999999999999998877766666555553
No 64
>PRK03633 putative MFS family transporter protein; Provisional
Probab=97.04 E-value=0.0034 Score=40.68 Aligned_cols=47 Identities=19% Similarity=0.226 Sum_probs=35.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
.-...........++.+..+++.||+|||+.+..+.....+.....+
T Consensus 43 ~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~ 89 (381)
T PRK03633 43 VGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLG 89 (381)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555677788889999999999999999888776666554443
No 65
>PRK11663 regulatory protein UhpC; Provisional
Probab=97.03 E-value=0.0024 Score=42.23 Aligned_cols=45 Identities=13% Similarity=0.298 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
...........++.+..+++.||+|||+.+..+.....++....+
T Consensus 62 ~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~ 106 (434)
T PRK11663 62 LLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFG 106 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHH
Confidence 444455667778888999999999999999888877777665544
No 66
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.03 E-value=0.0025 Score=41.70 Aligned_cols=40 Identities=13% Similarity=0.163 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHH
Q psy7928 13 TIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTL 52 (87)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~ 52 (87)
.........+..++.+.+.||+|||++++.+.....+...
T Consensus 44 ~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~ 83 (393)
T PRK11195 44 QMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCL 83 (393)
T ss_pred HHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHH
Confidence 3344566677788889999999999999998876655443
No 67
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=97.02 E-value=0.0048 Score=41.60 Aligned_cols=48 Identities=19% Similarity=0.232 Sum_probs=35.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
+..+.............+..+++.||+|||+.++.+.....+.....+
T Consensus 42 ~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~ 89 (495)
T PRK14995 42 ELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAA 89 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 334444555666677778889999999999999998877776655544
No 68
>PRK09952 shikimate transporter; Provisional
Probab=97.02 E-value=0.0031 Score=41.83 Aligned_cols=37 Identities=22% Similarity=0.342 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 18 TIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 18 ~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
..+.++.++.+++.||+|||+.+..+.....++....
T Consensus 75 ~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~ 111 (438)
T PRK09952 75 LFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALI 111 (438)
T ss_pred HHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 3355677778999999999999998887777665443
No 69
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.01 E-value=0.0041 Score=41.50 Aligned_cols=40 Identities=18% Similarity=0.402 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 15 IVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 15 ~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
.......++.++.+++.||+|||+.++.+.....+.....
T Consensus 62 ~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 101 (455)
T TIGR00892 62 IMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILA 101 (455)
T ss_pred HHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHH
Confidence 3344556777888999999999999988876666555444
No 70
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=96.98 E-value=0.0039 Score=39.87 Aligned_cols=42 Identities=17% Similarity=0.192 Sum_probs=31.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALS 50 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~ 50 (87)
.-...........++.+..+++.||+|||+.+..+.....+.
T Consensus 37 ~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 78 (355)
T TIGR00896 37 AGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAG 78 (355)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHH
Confidence 334455566777888889999999999999988877554443
No 71
>PRK11043 putative transporter; Provisional
Probab=96.98 E-value=0.0035 Score=40.77 Aligned_cols=42 Identities=21% Similarity=0.275 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTL 52 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~ 52 (87)
....+......++.++.+++.||+|||+.+..+.....+...
T Consensus 45 ~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 86 (401)
T PRK11043 45 ASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSL 86 (401)
T ss_pred HHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHH
Confidence 334445566678888999999999999999887765555443
No 72
>TIGR00901 2A0125 AmpG-related permease.
Probab=96.96 E-value=0.016 Score=37.11 Aligned_cols=38 Identities=18% Similarity=0.190 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 18 TIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 18 ~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
....++.++++++.||+|||+.+..+.....+....+.
T Consensus 256 ~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~ 293 (356)
T TIGR00901 256 LGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFV 293 (356)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 45678888899999999999998887776666554443
No 73
>PRK15075 citrate-proton symporter; Provisional
Probab=96.94 E-value=0.0051 Score=40.65 Aligned_cols=35 Identities=34% Similarity=0.449 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 21 MVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 21 ~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
.+++++.+++.||+|||+.++.+.....++....+
T Consensus 70 ~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~ 104 (434)
T PRK15075 70 PLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIA 104 (434)
T ss_pred hhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHH
Confidence 35678889999999999999998887776665554
No 74
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=96.92 E-value=0.018 Score=39.07 Aligned_cols=42 Identities=17% Similarity=0.237 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 13 TIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
..+..+...+..++++++.||+|||++++++...+.++...+
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~ 333 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALL 333 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 344456678888899999999999999999888777765443
No 75
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=96.88 E-value=0.013 Score=38.07 Aligned_cols=44 Identities=16% Similarity=0.311 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 12 CTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
..........++.+...++.||+|||+.+..+.....+....+.
T Consensus 244 ~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~ 287 (392)
T PRK10473 244 IMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLA 287 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 34455667788888889999999999998888766655554443
No 76
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=96.88 E-value=0.015 Score=39.27 Aligned_cols=43 Identities=26% Similarity=0.236 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 13 TIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
.........++.++.+++.||+|||+.+..+.....+....+.
T Consensus 301 ~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~ 343 (495)
T PRK14995 301 MLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLA 343 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 3344566777888889999999999988877766666554443
No 77
>KOG0255|consensus
Probab=96.88 E-value=0.0036 Score=42.28 Aligned_cols=45 Identities=24% Similarity=0.315 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
..+.+.-+...++.++.+++.|++|||+.++.+.....++-+..+
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a 166 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTA 166 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHH
Confidence 344445566677778888999999999999999888887764443
No 78
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=96.87 E-value=0.0094 Score=38.61 Aligned_cols=40 Identities=30% Similarity=0.327 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 15 IVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 15 ~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
+......++.++.+++.||+|||+.++.+.....+....+
T Consensus 62 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 101 (408)
T PRK09874 62 ITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLM 101 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHH
Confidence 4455667788888999999999999988877666665444
No 79
>PRK10504 putative transporter; Provisional
Probab=96.86 E-value=0.0062 Score=40.45 Aligned_cols=41 Identities=20% Similarity=0.276 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHH
Q psy7928 13 TIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLT 53 (87)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~ 53 (87)
.....+...++.++.+++.||+|||+.++.+.....++...
T Consensus 51 ~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~ 91 (471)
T PRK10504 51 IVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLF 91 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHH
Confidence 34445566778888999999999999998876666555443
No 80
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=96.86 E-value=0.015 Score=36.36 Aligned_cols=47 Identities=30% Similarity=0.475 Sum_probs=36.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhH-HHHHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRI-LLLVSAVIMALSTLTMG 55 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~-~l~~~~~~~~~~~~~~~ 55 (87)
.............++.++..++.||+|||+ .+..+.....++...+.
T Consensus 213 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 260 (352)
T cd06174 213 AGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLA 260 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 334555667788888888899999999999 88888777777666554
No 81
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.86 E-value=1e-05 Score=53.11 Aligned_cols=46 Identities=37% Similarity=0.738 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 10 NLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
...+.+.....+++.+.+.+++||+|||++++.+...+.++...++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~ 334 (451)
T PF00083_consen 289 FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILG 334 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4455666778888888999999999999999999998888887776
No 82
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=96.85 E-value=0.006 Score=38.90 Aligned_cols=35 Identities=26% Similarity=0.494 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 21 MVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 21 ~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
.++.++.+++.||+|||+.+..+.....+......
T Consensus 49 ~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~ 83 (394)
T TIGR00883 49 PLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIG 83 (394)
T ss_pred hhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 45678888999999999999988877766654443
No 83
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=96.83 E-value=0.021 Score=37.74 Aligned_cols=35 Identities=17% Similarity=0.266 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHH
Q psy7928 13 TIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIM 47 (87)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~ 47 (87)
..+......++.++.+++.||+|||+.++......
T Consensus 285 ~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~ 319 (432)
T PRK10406 285 MTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLA 319 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence 33444555667778889999999999877665543
No 84
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=96.80 E-value=0.022 Score=38.67 Aligned_cols=35 Identities=17% Similarity=0.343 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhhh-hchhHHHHHHHHHHHHHHHHHH
Q psy7928 21 MVTTWIATMIVDR-LGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 21 ~~~~~~~~~l~d~-~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
....++++++.|| +|||+.++.+.....+....++
T Consensus 71 ~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~ 106 (500)
T PRK09584 71 YGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVA 106 (500)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 3344578999999 5999999998877776655554
No 85
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=96.79 E-value=0.03 Score=36.40 Aligned_cols=45 Identities=18% Similarity=0.153 Sum_probs=32.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLT 53 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~ 53 (87)
.............++.+..+++.||+|||+.+..+.....+.+..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 301 (406)
T PRK11551 257 AGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAA 301 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 334455566778888899999999999999888765555554433
No 86
>PRK12307 putative sialic acid transporter; Provisional
Probab=96.78 E-value=0.027 Score=36.82 Aligned_cols=39 Identities=10% Similarity=0.103 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHH
Q psy7928 13 TIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALST 51 (87)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~ 51 (87)
.....+...++.++..++.||+|||+.+..+.....+..
T Consensus 272 ~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 310 (426)
T PRK12307 272 MTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFI 310 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 344566778888899999999999998887766555443
No 87
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=96.78 E-value=0.02 Score=39.36 Aligned_cols=41 Identities=24% Similarity=0.422 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 17 GTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 17 ~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
.+=.++.+++++.+.||+.||++++.+-..+.+....+...
T Consensus 55 ~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l 95 (524)
T PF05977_consen 55 TLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVL 95 (524)
T ss_pred HHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHH
Confidence 34445667778899999999999999988777666666554
No 88
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=96.77 E-value=0.021 Score=36.68 Aligned_cols=38 Identities=21% Similarity=0.165 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMA 48 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~ 48 (87)
.......+...++.+...++.||+|||+.+..+.....
T Consensus 234 ~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~ 271 (377)
T PRK11102 234 YYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQF 271 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 34445566777888889999999999998887765433
No 89
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=96.76 E-value=0.02 Score=38.25 Aligned_cols=37 Identities=11% Similarity=-0.003 Sum_probs=27.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAV 45 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~ 45 (87)
.............++.+.++++.||+|||+.......
T Consensus 296 a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~ 332 (467)
T PRK09556 296 AINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIA 332 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHH
Confidence 3344445566788999999999999999987665443
No 90
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=96.75 E-value=0.007 Score=39.70 Aligned_cols=39 Identities=21% Similarity=0.239 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 17 GTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 17 ~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
........++++.+.||+|||+.+..+.....+....+.
T Consensus 56 ~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~ 94 (400)
T PRK11646 56 QFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMA 94 (400)
T ss_pred HHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 344555567888999999999999998887777766554
No 91
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=96.75 E-value=0.013 Score=42.88 Aligned_cols=36 Identities=8% Similarity=0.090 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHH
Q psy7928 16 VGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALST 51 (87)
Q Consensus 16 ~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~ 51 (87)
..+...+++++++++.||+|||++++.+.....+..
T Consensus 56 ~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~ 91 (1146)
T PRK08633 56 FLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLT 91 (1146)
T ss_pred HHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHH
Confidence 344456777888999999999999988765544443
No 92
>PRK03893 putative sialic acid transporter; Provisional
Probab=96.75 E-value=0.019 Score=38.29 Aligned_cols=40 Identities=23% Similarity=0.197 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALS 50 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~ 50 (87)
...........++.+.++++.||+|||+.+..+.....+.
T Consensus 315 ~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~ 354 (496)
T PRK03893 315 NVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLL 354 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 4444556677888899999999999999888766544443
No 93
>KOG2615|consensus
Probab=96.74 E-value=0.0057 Score=40.88 Aligned_cols=42 Identities=24% Similarity=0.320 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 16 VGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 16 ~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
....+++.++..+.+.|++|||+.++.+..+..++.++.+..
T Consensus 77 F~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S 118 (451)
T KOG2615|consen 77 FSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS 118 (451)
T ss_pred HHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHH
Confidence 456788888888889999999999999999888887776643
No 94
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=96.73 E-value=0.0086 Score=39.12 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHH
Q psy7928 12 CTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAV 45 (87)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~ 45 (87)
..........++++..+++.||+|||++++....
T Consensus 31 ~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~ 64 (368)
T TIGR00903 31 LAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLA 64 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 3334455667888889999999999998765543
No 95
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=96.72 E-value=0.0028 Score=41.91 Aligned_cols=47 Identities=17% Similarity=0.235 Sum_probs=34.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
+.............++.++.+++.||+|||+++..+.....++....
T Consensus 62 ~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~ 108 (438)
T TIGR00712 62 ELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLM 108 (438)
T ss_pred HhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHH
Confidence 33445555667777888889999999999998888766666554443
No 96
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=96.72 E-value=0.023 Score=37.59 Aligned_cols=45 Identities=16% Similarity=0.157 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
....+......++.+...++.||+|||+++..+.....+....+.
T Consensus 255 ~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~ 299 (418)
T TIGR00889 255 IWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFA 299 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 333444556667778888999999999999998887777655444
No 97
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=96.69 E-value=0.034 Score=35.60 Aligned_cols=44 Identities=14% Similarity=0.269 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 12 CTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
..........++.++..++.||+|||+.+..+.....+....+.
T Consensus 247 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (385)
T TIGR00710 247 LFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLE 290 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 34445667788888999999999999988877666665554443
No 98
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=96.69 E-value=0.028 Score=36.10 Aligned_cols=37 Identities=19% Similarity=0.157 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIM 47 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~ 47 (87)
...........++.+...++.||+|||+.+..+....
T Consensus 278 ~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~ 314 (405)
T TIGR00891 278 NIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAG 314 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHH
Confidence 3344556777888889999999999999887766544
No 99
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=96.68 E-value=0.011 Score=37.78 Aligned_cols=29 Identities=14% Similarity=0.062 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhHHHHHH
Q psy7928 15 IVGTIMMVTTWIATMIVDRLGRRILLLVS 43 (87)
Q Consensus 15 ~~~~~~~~~~~~~~~l~d~~gRr~~l~~~ 43 (87)
.......+.++..+.+.||+||||.++..
T Consensus 41 ~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~ 69 (375)
T TIGR00899 41 GSAIVGIAVSQLLATRSDYQGDRKGLILF 69 (375)
T ss_pred HHHHHHHHHHHHHHHHHhccCCchHHHHH
Confidence 34455677788888999999998865543
No 100
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=96.68 E-value=0.0037 Score=42.46 Aligned_cols=48 Identities=17% Similarity=0.284 Sum_probs=34.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhh----hhchhHHHHHH-HHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVD----RLGRRILLLVS-AVIMALSTLTMG 55 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d----~~gRr~~l~~~-~~~~~~~~~~~~ 55 (87)
.......+..+...+.+++.+++.| |+||||.++.+ .....+++..+.
T Consensus 40 ~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~ 92 (477)
T TIGR01301 40 WASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIG 92 (477)
T ss_pred HHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 3445555667888889999999999 59999988775 455555555554
No 101
>KOG0253|consensus
Probab=96.66 E-value=0.014 Score=39.25 Aligned_cols=47 Identities=19% Similarity=0.270 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 10 NLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
+.-..+.+...+++.++..+++|++|||+.+-.....++++++.+..
T Consensus 384 YrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~ 430 (528)
T KOG0253|consen 384 YRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTT 430 (528)
T ss_pred HHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHH
Confidence 34556778899999999999999999999998888888888766643
No 102
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=96.64 E-value=0.033 Score=35.18 Aligned_cols=45 Identities=13% Similarity=0.218 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
...........++.+...++.||.+||+.+..+.....+....+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (365)
T TIGR00900 251 WVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVG 295 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHH
Confidence 344455666778888888999999999988877665555554443
No 103
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=96.61 E-value=0.026 Score=36.08 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7928 17 GTIMMVTTWIATMIVDRLGRRILLLVSAVIMALS 50 (87)
Q Consensus 17 ~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~ 50 (87)
.....++.+.+.++.||+|||+.+..+.....+.
T Consensus 245 ~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~ 278 (375)
T TIGR00899 245 AGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAF 278 (375)
T ss_pred HHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHH
Confidence 3445566677889999999999887765544333
No 104
>PRK10091 MFS transport protein AraJ; Provisional
Probab=96.60 E-value=0.017 Score=37.56 Aligned_cols=46 Identities=17% Similarity=0.281 Sum_probs=33.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
.............++.++..++.||+|||+++..+.....+..+.+
T Consensus 237 ~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~ 282 (382)
T PRK10091 237 MTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLML 282 (382)
T ss_pred HHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHH
Confidence 3344455667788888999999999999998888776666554433
No 105
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.50 E-value=0.039 Score=38.69 Aligned_cols=49 Identities=12% Similarity=0.171 Sum_probs=38.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
+..+.+......+....++.+.+.|.+|||...+.+.....+..++.+.
T Consensus 79 ~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at 127 (599)
T PF06609_consen 79 NWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT 127 (599)
T ss_pred cchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc
Confidence 4445666677777888888899999999999999998877777766553
No 106
>PRK03699 putative transporter; Provisional
Probab=96.48 E-value=0.056 Score=35.27 Aligned_cols=39 Identities=23% Similarity=0.197 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7928 12 CTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALS 50 (87)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~ 50 (87)
..........++.+...++.||++||+.+........+.
T Consensus 246 ~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~ 284 (394)
T PRK03699 246 LVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVL 284 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHH
Confidence 334445667888899999999999999887766544443
No 107
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=96.47 E-value=0.066 Score=35.06 Aligned_cols=31 Identities=16% Similarity=-0.069 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLL 41 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~ 41 (87)
...........++.+..+++.||+|||+.+.
T Consensus 261 ~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~ 291 (402)
T TIGR00897 261 QIWGTFFFTNIVFNVIFGIVGDKLGWMNTVR 291 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHHH
Confidence 3344556778888999999999999988764
No 108
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.46 E-value=0.018 Score=39.36 Aligned_cols=55 Identities=22% Similarity=0.376 Sum_probs=39.9
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhh-chhHHHHHHHHHHHHHHHHHHHH
Q psy7928 2 GHGVLWNPNLCTIIVGTIMMVTTWIATMIVDRL-GRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~-gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
|++.+ ++....-..+..-.....+++|+.||+ |+|+.+..|...+.+..++++..
T Consensus 57 g~~~~-~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~ 112 (498)
T COG3104 57 GFDET-HATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAIS 112 (498)
T ss_pred CcChH-hhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcc
Confidence 34444 444344444555666778899999995 99999999999888888777653
No 109
>PF13347 MFS_2: MFS/sugar transport protein
Probab=96.43 E-value=0.03 Score=36.99 Aligned_cols=46 Identities=15% Similarity=0.259 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 12 CTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
......+...++.++..++.||+|||+.+..+.....+....+...
T Consensus 265 ~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~ 310 (428)
T PF13347_consen 265 FMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFL 310 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHH
Confidence 3345567778888888999999999999999988888877766544
No 110
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=96.42 E-value=0.032 Score=37.12 Aligned_cols=39 Identities=0% Similarity=-0.090 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHH
Q psy7928 15 IVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLT 53 (87)
Q Consensus 15 ~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~ 53 (87)
.......++++.++++.||+|||+.+..+.....+....
T Consensus 84 ~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~ 122 (465)
T TIGR00894 84 SHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIV 122 (465)
T ss_pred HHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHH
Confidence 344567778888899999999999998887666555443
No 111
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=96.41 E-value=0.046 Score=35.49 Aligned_cols=40 Identities=20% Similarity=0.105 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 15 IVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 15 ~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
.......+......++.||+|+|+.+..+.....+....+
T Consensus 248 ~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~ 287 (382)
T PRK11128 248 LGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLM 287 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Confidence 4445666666777889999999999888777766665444
No 112
>TIGR00895 2A0115 benzoate transport.
Probab=96.39 E-value=0.062 Score=34.33 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=25.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVS 43 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~ 43 (87)
.........+...++.++..++.||+|||+.....
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 321 (398)
T TIGR00895 287 AATGGALFNFGGVIGSIIFGWLADRLGPRVTALLL 321 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Confidence 33445556677888999999999999999554443
No 113
>KOG0254|consensus
Probab=96.35 E-value=0.024 Score=38.49 Aligned_cols=46 Identities=26% Similarity=0.437 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
.......+...++.++.+.+.|++|||+.++.+.....+..++.+.
T Consensus 93 ~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~ 138 (513)
T KOG0254|consen 93 LLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIAL 138 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 5556667778889999999999999999998887777666655554
No 114
>PRK15011 sugar efflux transporter B; Provisional
Probab=96.34 E-value=0.057 Score=35.25 Aligned_cols=33 Identities=33% Similarity=0.438 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHH
Q psy7928 16 VGTIMMVTTWIATMIVDRLGRRILLLVSAVIMA 48 (87)
Q Consensus 16 ~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~ 48 (87)
......++.++.+++.||+|||+....+.....
T Consensus 261 ~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~ 293 (393)
T PRK15011 261 AAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGV 293 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 344556677888999999999997776554433
No 115
>PRK11010 ampG muropeptide transporter; Validated
Probab=96.28 E-value=0.052 Score=36.78 Aligned_cols=36 Identities=14% Similarity=0.192 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHH
Q psy7928 17 GTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTL 52 (87)
Q Consensus 17 ~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~ 52 (87)
.....++.++++++.||+|||+.+..+.....+...
T Consensus 269 ~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l 304 (491)
T PRK11010 269 LLATIVGALYGGILMQRLSLFRALMIFGILQGVSNA 304 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 356778888999999999999987766655554443
No 116
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=96.23 E-value=0.093 Score=34.41 Aligned_cols=41 Identities=22% Similarity=0.355 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 14 IIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
.+......++.++..++.||+|||+.+..+.....+....+
T Consensus 264 ~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~ 304 (437)
T TIGR00792 264 SIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIF 304 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 34456677788888899999999999888876666655444
No 117
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.23 E-value=0.093 Score=35.84 Aligned_cols=45 Identities=18% Similarity=0.388 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
.......+..+++.+....+.+|+|||+++.++.....+....+-
T Consensus 276 ~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~ 320 (467)
T COG2211 276 LLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLY 320 (467)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 344445555666678888999999999999999776666655443
No 118
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=96.21 E-value=0.071 Score=35.65 Aligned_cols=53 Identities=23% Similarity=0.431 Sum_probs=41.2
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 2 GHGVLWNPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
|++.+ +........+...++++.+++++.|| +.|+.+......+.+.+..+..
T Consensus 243 g~s~~-~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~ 295 (394)
T COG2814 243 GFSVS-AVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTF 295 (394)
T ss_pred CCCHh-HHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHH
Confidence 44444 45566677888999999999999999 8888888887777777766553
No 119
>PRK09528 lacY galactoside permease; Reviewed
Probab=96.19 E-value=0.071 Score=35.02 Aligned_cols=40 Identities=25% Similarity=0.450 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 16 VGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 16 ~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
......++.+.+.++.||+|||+.+..+.....+....++
T Consensus 271 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~ 310 (420)
T PRK09528 271 QVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSG 310 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHH
Confidence 4455667888899999999999998887776666555443
No 120
>PRK10504 putative transporter; Provisional
Probab=96.14 E-value=0.081 Score=35.22 Aligned_cols=40 Identities=25% Similarity=0.278 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 16 VGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 16 ~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
.........++...+.||+|||+++..+.....+....+.
T Consensus 306 ~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~ 345 (471)
T PRK10504 306 MVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFM 345 (471)
T ss_pred HHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 3444555556778899999999999888776666655443
No 121
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=96.12 E-value=0.04 Score=36.05 Aligned_cols=44 Identities=11% Similarity=0.116 Sum_probs=33.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTL 52 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~ 52 (87)
.-...........++.+...++.||.+||+..+.+.....+...
T Consensus 242 ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~ 285 (393)
T PRK09705 242 SGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFC 285 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHH
Confidence 33455566778889999999999999999988887655555443
No 122
>PRK10489 enterobactin exporter EntS; Provisional
Probab=96.11 E-value=0.016 Score=37.95 Aligned_cols=43 Identities=19% Similarity=0.388 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 12 CTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
......+...+++++.+++.||+|||+.+..+.....+....+
T Consensus 57 ~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~ 99 (417)
T PRK10489 57 SVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGL 99 (417)
T ss_pred HHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHH
Confidence 3344556667788888999999999998887766555554443
No 123
>PRK10133 L-fucose transporter; Provisional
Probab=96.11 E-value=0.039 Score=36.84 Aligned_cols=40 Identities=13% Similarity=0.110 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALS 50 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~ 50 (87)
...........++.+.+.++.||+|||+.+..+.......
T Consensus 299 ~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~ 338 (438)
T PRK10133 299 NYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMAL 338 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 3445566778888999999999999999887776544433
No 124
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=96.07 E-value=0.13 Score=33.53 Aligned_cols=40 Identities=13% Similarity=0.036 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 17 GTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 17 ~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
.....++.+...++.||++||+....+.....+.+..+..
T Consensus 261 ~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~ 300 (406)
T PRK15402 261 FGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAAL 300 (406)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677778889999999999888877666555554443
No 125
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.02 E-value=0.06 Score=34.41 Aligned_cols=43 Identities=16% Similarity=0.148 Sum_probs=31.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALST 51 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~ 51 (87)
.............++.+.+.++.||+|+|+++..+.....+..
T Consensus 180 a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~ 222 (310)
T TIGR01272 180 AAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLS 222 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 3344455566778899999999999999998877766555544
No 126
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=96.00 E-value=0.09 Score=34.40 Aligned_cols=34 Identities=26% Similarity=0.315 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHH
Q psy7928 19 IMMVTTWIATMIVDRLGRRILLLVSAVIMALSTL 52 (87)
Q Consensus 19 ~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~ 52 (87)
...++.+++.++.||+|||+.+..+.....+...
T Consensus 258 ~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l 291 (402)
T PRK11902 258 ATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNL 291 (402)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 4677888899999999999988776665555443
No 127
>PRK03633 putative MFS family transporter protein; Provisional
Probab=95.95 E-value=0.044 Score=35.56 Aligned_cols=37 Identities=22% Similarity=0.450 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7928 13 TIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMAL 49 (87)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~ 49 (87)
.........++.+...++.||+|||+.+..+.....+
T Consensus 241 ~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~ 277 (381)
T PRK03633 241 MALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVIL 277 (381)
T ss_pred HHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHH
Confidence 3345566778888889999999999988766544443
No 128
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=95.94 E-value=0.058 Score=34.52 Aligned_cols=43 Identities=12% Similarity=0.160 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhh-chhHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRL-GRRILLLVSAVIMALST 51 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~-gRr~~l~~~~~~~~~~~ 51 (87)
.-.......+...++.+...++.||+ +||+.+..+...+.++.
T Consensus 234 ~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 277 (355)
T TIGR00896 234 AGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGL 277 (355)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Confidence 33444556677888899999999999 56666656555454443
No 129
>PRK09848 glucuronide transporter; Provisional
Probab=95.92 E-value=0.12 Score=34.38 Aligned_cols=37 Identities=16% Similarity=0.264 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 18 TIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 18 ~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
...+++.++..++.||+|+|+.+..+.....+....+
T Consensus 275 ~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~ 311 (448)
T PRK09848 275 VGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLF 311 (448)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 4456677788889999999999998877666665444
No 130
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=95.87 E-value=0.15 Score=33.14 Aligned_cols=42 Identities=19% Similarity=0.297 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 14 IIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
........++.+...++.||+|||+.+..+.....+....+.
T Consensus 256 ~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 297 (399)
T PRK05122 256 TLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLW 297 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 344556677778888999999999988877666666554443
No 131
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=95.85 E-value=0.15 Score=34.77 Aligned_cols=45 Identities=18% Similarity=0.351 Sum_probs=35.7
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhchh--HHHHHHHHHH
Q psy7928 2 GHGVLWNPNLCTIIVGTIMMVTTWIATMIVDRLGRR--ILLLVSAVIM 47 (87)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr--~~l~~~~~~~ 47 (87)
|++.. +.....+...+...++.++.+++.||+|.| ++++.+....
T Consensus 313 g~s~~-~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 313 GMSTT-QLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILW 359 (477)
T ss_pred CcCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 55665 666777788899999999999999999998 7776665544
No 132
>PRK03545 putative arabinose transporter; Provisional
Probab=95.83 E-value=0.2 Score=32.61 Aligned_cols=33 Identities=15% Similarity=0.263 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHH
Q psy7928 10 NLCTIIVGTIMMVTTWIATMIVDRLGRRILLLV 42 (87)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~ 42 (87)
.......+....++.+...++.||.+||++...
T Consensus 244 ~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~ 276 (390)
T PRK03545 244 TLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIA 276 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Confidence 344445567788888999999999998875443
No 133
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=95.78 E-value=0.066 Score=35.50 Aligned_cols=43 Identities=14% Similarity=0.098 Sum_probs=30.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhch-hHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGR-RILLLVSAVIMALS 50 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gR-r~~l~~~~~~~~~~ 50 (87)
+.-...........++++..+.+.||+|| |+.+..+.....+.
T Consensus 39 ~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~ 82 (418)
T TIGR00889 39 EIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALL 82 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 34455566778889999999999999965 66666555444333
No 134
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=95.78 E-value=0.14 Score=33.38 Aligned_cols=41 Identities=20% Similarity=0.144 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 15 IVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 15 ~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
+......+.......+.||+|+|+++..+.....+....++
T Consensus 248 ~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~ 288 (382)
T TIGR00902 248 IGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIG 288 (382)
T ss_pred HHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 34555666667777889999999999988887777766554
No 135
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=95.72 E-value=0.12 Score=34.91 Aligned_cols=30 Identities=13% Similarity=0.141 Sum_probs=23.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchh
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRR 37 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr 37 (87)
+......+..+...++.++++++.||++||
T Consensus 289 ~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 289 TAGAIAASFGLMNLFARPAGGYLSDVAARR 318 (476)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 344455566777888999999999999876
No 136
>PRK10429 melibiose:sodium symporter; Provisional
Probab=95.72 E-value=0.22 Score=33.51 Aligned_cols=39 Identities=28% Similarity=0.313 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHH
Q psy7928 15 IVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLT 53 (87)
Q Consensus 15 ~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~ 53 (87)
...+..+++.++..++.||+|||+.++.+.....+....
T Consensus 274 ~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~ 312 (473)
T PRK10429 274 YAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGV 312 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 344667777888889999999999998877655544433
No 137
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=95.70 E-value=0.066 Score=36.45 Aligned_cols=44 Identities=16% Similarity=0.180 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 12 CTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
...+......+..+..+.+.||+|+|++...+.....+.....+
T Consensus 75 l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~ 118 (462)
T PRK15034 75 LTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLG 118 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 33344455556666678899999999999888877766665554
No 138
>KOG1330|consensus
Probab=95.66 E-value=0.018 Score=39.18 Aligned_cols=48 Identities=19% Similarity=0.340 Sum_probs=38.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
+.-..+....+.+.++.++++++.||+.||+++..|...-.++.+.-+
T Consensus 69 ~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~ 116 (493)
T KOG1330|consen 69 ELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASG 116 (493)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHH
Confidence 444667777888999999999999999999998888766666554444
No 139
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=95.63 E-value=0.16 Score=32.90 Aligned_cols=36 Identities=17% Similarity=0.299 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHH
Q psy7928 17 GTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTL 52 (87)
Q Consensus 17 ~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~ 52 (87)
+....++.+...++.||+|||+.+..+.....+...
T Consensus 268 ~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 303 (408)
T PRK09874 268 GVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLI 303 (408)
T ss_pred HHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH
Confidence 344455666677899999999998887765554443
No 140
>PRK09669 putative symporter YagG; Provisional
Probab=95.59 E-value=0.26 Score=32.80 Aligned_cols=33 Identities=6% Similarity=0.094 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7928 17 GTIMMVTTWIATMIVDRLGRRILLLVSAVIMAL 49 (87)
Q Consensus 17 ~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~ 49 (87)
....+++.++..++.||+|||+.+..+.....+
T Consensus 274 ~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~ 306 (444)
T PRK09669 274 MIAGLFGALLSERLLGKFDRVRAFKWTIVAFVI 306 (444)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 344556677778899999999998887655443
No 141
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=95.56 E-value=0.16 Score=33.21 Aligned_cols=35 Identities=31% Similarity=0.461 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhhhh-----chhH-HHHHHHHHHHHHHHHHH
Q psy7928 21 MVTTWIATMIVDRL-----GRRI-LLLVSAVIMALSTLTMG 55 (87)
Q Consensus 21 ~~~~~~~~~l~d~~-----gRr~-~l~~~~~~~~~~~~~~~ 55 (87)
.+..++.+.++||+ |||| ++..+...+.+++..+.
T Consensus 46 ~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~ 86 (402)
T PRK11902 46 YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMA 86 (402)
T ss_pred HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHH
Confidence 56777888899999 7765 67777777777766554
No 142
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=95.47 E-value=0.2 Score=33.77 Aligned_cols=47 Identities=23% Similarity=0.306 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
..+........+.=+.++++.||+|+||.++.....+.++..+.+..
T Consensus 258 ~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~ 304 (417)
T COG2223 258 LIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLF 304 (417)
T ss_pred HHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHcc
Confidence 33444444455555678899999999999999999888888777644
No 143
>PRK11043 putative transporter; Provisional
Probab=95.46 E-value=0.35 Score=31.50 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHH
Q psy7928 16 VGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTL 52 (87)
Q Consensus 16 ~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~ 52 (87)
......++.+.+.++.||++||+..........++..
T Consensus 247 ~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~ 283 (401)
T PRK11043 247 QTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVI 283 (401)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 3455667777778899999999876655544444433
No 144
>KOG0569|consensus
Probab=95.37 E-value=0.13 Score=35.34 Aligned_cols=40 Identities=30% Similarity=0.484 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 16 VGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 16 ~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
......++++.+..+.|++|||..++.+......+...+.
T Consensus 69 f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~ 108 (485)
T KOG0569|consen 69 FFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMG 108 (485)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Confidence 3455677888888999999999888777766555554444
No 145
>PTZ00207 hypothetical protein; Provisional
Probab=95.35 E-value=0.092 Score=36.84 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=28.7
Q ss_pred HHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 23 TTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 23 ~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
.++.++++.||+|||++++++.....+.....+..
T Consensus 77 ~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala 111 (591)
T PTZ00207 77 FLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALT 111 (591)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 44567899999999999999998888887766653
No 146
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=95.28 E-value=0.3 Score=31.80 Aligned_cols=38 Identities=21% Similarity=0.433 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHH
Q psy7928 16 VGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLT 53 (87)
Q Consensus 16 ~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~ 53 (87)
..+...+......++.||+|||+.+..+.....+....
T Consensus 263 ~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~ 300 (396)
T TIGR00882 263 GELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIG 300 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Confidence 34556666777789999999999988877766665443
No 147
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=95.21 E-value=0.41 Score=31.74 Aligned_cols=38 Identities=21% Similarity=0.295 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 18 TIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 18 ~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
....++-+++.++.||+++|+++......+.+...+..
T Consensus 280 ~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~ 317 (410)
T TIGR00885 280 VIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSI 317 (410)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 55678888999999999999988877766666554443
No 148
>PRK12382 putative transporter; Provisional
Probab=95.18 E-value=0.19 Score=32.57 Aligned_cols=40 Identities=18% Similarity=0.296 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 15 IVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 15 ~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
.......++.+...++.||+|||+.+..+.....+....+
T Consensus 257 ~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~ 296 (392)
T PRK12382 257 AFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLL 296 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHH
Confidence 3445566777888899999999998887776666655443
No 149
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.06 E-value=0.14 Score=33.81 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7928 18 TIMMVTTWIATMIVDRLGRRILLLVSAVIMALS 50 (87)
Q Consensus 18 ~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~ 50 (87)
....+...+.+.+.||+|||+.-+.-+....++
T Consensus 80 ~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~s 112 (354)
T PF05631_consen 80 ASSAIFGTFVGSLADRYGRKKACLLFCILYSLS 112 (354)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 334455556667899999998666655544444
No 150
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=94.97 E-value=0.18 Score=33.82 Aligned_cols=46 Identities=20% Similarity=0.175 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
+..........++.++-..+.||+.||++++.......++.++-+.
T Consensus 52 ~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~al 97 (394)
T COG2814 52 QLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSAL 97 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH
Confidence 3344456677788888888999999999999988877777665543
No 151
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=94.87 E-value=0.29 Score=36.31 Aligned_cols=27 Identities=11% Similarity=0.138 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHhhhhchhHHHHH
Q psy7928 16 VGTIMMVTTWIATMIVDRLGRRILLLV 42 (87)
Q Consensus 16 ~~~~~~~~~~~~~~l~d~~gRr~~l~~ 42 (87)
..+...+.+++++++.||+|||+++..
T Consensus 61 ~~l~~~l~~~~~G~laDr~~rk~~~~~ 87 (1140)
T PRK06814 61 FILPFFIFSALAGQLADKYDKAKLAKI 87 (1140)
T ss_pred HHHHHHHHhhhHHhhhhhccHHHHHHH
Confidence 344456777888999999999997643
No 152
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=94.81 E-value=0.0016 Score=42.89 Aligned_cols=44 Identities=25% Similarity=0.363 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 12 CTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
..........++.++++++.||+|||+.++.+...+.+..++.+
T Consensus 51 ~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~ 94 (451)
T PF00083_consen 51 LTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIA 94 (451)
T ss_pred HHHHHHhhhccccccccccccccccccccccccccccccccccc
Confidence 34445566677788888999999999999988877766655544
No 153
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=94.77 E-value=0.49 Score=31.57 Aligned_cols=41 Identities=20% Similarity=0.240 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhc-hhHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLG-RRILLLVSAVIMALST 51 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~g-Rr~~l~~~~~~~~~~~ 51 (87)
..........++..++.+++.||.+ +|+.+........+.+
T Consensus 41 ~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~ 82 (400)
T PF03825_consen 41 ILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALAL 82 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHH
Confidence 4444566778888888899999985 4566655555444443
No 154
>TIGR00893 2A0114 d-galactonate transporter.
Probab=94.73 E-value=0.35 Score=30.67 Aligned_cols=28 Identities=18% Similarity=0.204 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRI 38 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~ 38 (87)
...........++.+..+++.||++||+
T Consensus 255 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 255 FMASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4445556777888999999999999996
No 155
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=94.69 E-value=0.16 Score=32.97 Aligned_cols=29 Identities=10% Similarity=0.117 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhhhhchhHHHHHHHHHH
Q psy7928 19 IMMVTTWIATMIVDRLGRRILLLVSAVIM 47 (87)
Q Consensus 19 ~~~~~~~~~~~l~d~~gRr~~l~~~~~~~ 47 (87)
....+.+.+.++.||+|||+.+..+....
T Consensus 256 ~~~~g~~~~g~l~~r~g~~~~l~~~~~~~ 284 (390)
T TIGR02718 256 TVLLGCGGGAWLVRRAGLWRTFILGVGLA 284 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 44566778889999999999988766544
No 156
>PRK11462 putative transporter; Provisional
Probab=94.53 E-value=0.77 Score=30.97 Aligned_cols=33 Identities=6% Similarity=0.058 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHH
Q psy7928 15 IVGTIMMVTTWIATMIVDRLGRRILLLVSAVIM 47 (87)
Q Consensus 15 ~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~ 47 (87)
...+...++++++.++.||+|||+.+..+....
T Consensus 271 ~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~ 303 (460)
T PRK11462 271 TYCVGNLIGSALAKPLTDWKCKVTIFWWTNALL 303 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 445566778888899999999999877554433
No 157
>PRK10489 enterobactin exporter EntS; Provisional
Probab=94.47 E-value=0.64 Score=30.50 Aligned_cols=43 Identities=12% Similarity=0.006 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 12 CTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
..........++.+...++.||.+||+.+..+.....+.+..+
T Consensus 264 ~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~ 306 (417)
T PRK10489 264 LYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLF 306 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHH
Confidence 3344556677778888888898777777776666555554443
No 158
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=94.31 E-value=0.02 Score=40.11 Aligned_cols=48 Identities=15% Similarity=0.153 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHHh
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYYF 58 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~~ 58 (87)
...........+..++..++.||.|||+++..+...+++..++.+.-+
T Consensus 72 ~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alph 119 (633)
T TIGR00805 72 LINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPH 119 (633)
T ss_pred eeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChH
Confidence 334445666778888889999999999999999988888887776543
No 159
>KOG3764|consensus
Probab=94.23 E-value=0.094 Score=35.47 Aligned_cols=43 Identities=19% Similarity=0.335 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 15 IVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 15 ~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
....++++.+++.+.+.||+|+|.+++.|...+..+.++++..
T Consensus 114 skA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg 156 (464)
T KOG3764|consen 114 SKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG 156 (464)
T ss_pred HHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc
Confidence 4568899999999999999999999999999999998888753
No 160
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=94.02 E-value=0.29 Score=32.32 Aligned_cols=30 Identities=20% Similarity=0.018 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILL 40 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l 40 (87)
...........++.+.++++.||++||+..
T Consensus 283 ~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~ 312 (412)
T TIGR02332 283 LLAAIPQFCTIFGMIWWSRHSDRLKERKHH 312 (412)
T ss_pred HHhhHHHHHHHHHHHHHHHHhcccCccHHH
Confidence 344555667788888999999999977753
No 161
>PRK10429 melibiose:sodium symporter; Provisional
Probab=93.98 E-value=0.24 Score=33.32 Aligned_cols=39 Identities=15% Similarity=0.249 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHhh----hhch-hHHHHHHHHHHHHHHHHH
Q psy7928 16 VGTIMMVTTWIATMIVD----RLGR-RILLLVSAVIMALSTLTM 54 (87)
Q Consensus 16 ~~~~~~~~~~~~~~l~d----~~gR-r~~l~~~~~~~~~~~~~~ 54 (87)
..++-.+..++.+++.| |+|| |+.++.+...+.+++..+
T Consensus 51 ~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ll 94 (473)
T PRK10429 51 ARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLL 94 (473)
T ss_pred HHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHH
Confidence 34445556666788999 5688 556666666666665444
No 162
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=93.94 E-value=0.35 Score=30.40 Aligned_cols=43 Identities=28% Similarity=0.484 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 13 TIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
.........++.++..++.||++||+..........+....+.
T Consensus 249 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (352)
T PF07690_consen 249 FSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLL 291 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 3445566666688889999999988877776665555544443
No 163
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=93.80 E-value=0.17 Score=33.21 Aligned_cols=42 Identities=24% Similarity=0.334 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhh----hchhH-HHHHHHHHHHHHHHHH
Q psy7928 13 TIIVGTIMMVTTWIATMIVDR----LGRRI-LLLVSAVIMALSTLTM 54 (87)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~d~----~gRr~-~l~~~~~~~~~~~~~~ 54 (87)
..+......+..++.+++.|| +|||| .++.+.....++...+
T Consensus 41 ~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~ 87 (437)
T TIGR00792 41 FLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLL 87 (437)
T ss_pred HHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHH
Confidence 334456667777888899997 67755 5556666565554444
No 164
>TIGR00901 2A0125 AmpG-related permease.
Probab=93.77 E-value=0.77 Score=29.36 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=21.0
Q ss_pred HHHHHHHhhhh-----chhHHH-HHHHHHHHHHHHHH
Q psy7928 24 TWIATMIVDRL-----GRRILL-LVSAVIMALSTLTM 54 (87)
Q Consensus 24 ~~~~~~l~d~~-----gRr~~l-~~~~~~~~~~~~~~ 54 (87)
.++.+.++||+ ||||.+ +.+.....+++..+
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l 74 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLIL 74 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 67788899997 888864 45555555554444
No 165
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=93.66 E-value=0.17 Score=34.28 Aligned_cols=46 Identities=22% Similarity=0.376 Sum_probs=36.6
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHH
Q psy7928 2 GHGVLWNPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMA 48 (87)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~ 48 (87)
|.+.. +-.......++...+++++.+++.||+|-|+++..+.....
T Consensus 284 gls~~-~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~ 329 (438)
T COG2270 284 GLSST-ELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILS 329 (438)
T ss_pred CccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHH
Confidence 34444 56677778889999999999999999999998888775444
No 166
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=93.42 E-value=1.4 Score=29.34 Aligned_cols=29 Identities=7% Similarity=0.056 Sum_probs=21.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchh
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRR 37 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr 37 (87)
.............++.+.++++.||++||
T Consensus 289 ~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 317 (438)
T TIGR00712 289 SSWAYFLYEYAGIPGTLLCGWMSDKVFKG 317 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 33445556677888899999999999643
No 167
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=93.35 E-value=0.94 Score=28.53 Aligned_cols=46 Identities=17% Similarity=0.140 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
......++...+ .+.++.+.|+.|.|..+.+|..........+...
T Consensus 41 ~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~ 86 (250)
T PF06813_consen 41 TLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLA 86 (250)
T ss_pred HHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444 4667888999999999999998888887766654
No 168
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=93.27 E-value=0.65 Score=24.48 Aligned_cols=47 Identities=19% Similarity=0.097 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
.....+..-.+++.+.+.++.++.++|+.+..+.....+++..++..
T Consensus 31 ~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 31 WLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455555666666666677777888888888888888777754
No 169
>KOG3762|consensus
Probab=93.04 E-value=0.25 Score=34.67 Aligned_cols=49 Identities=14% Similarity=0.207 Sum_probs=34.4
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHH
Q psy7928 2 GHGVLWNPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALST 51 (87)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~ 51 (87)
|++.+ ..-......-.+.+++.++.+++.||+.|||.++.+..+..+..
T Consensus 42 Gl~p~-~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a 90 (618)
T KOG3762|consen 42 GLNPA-VVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTA 90 (618)
T ss_pred CCCHH-HhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHH
Confidence 44444 34455556678889999999999999988777766665444443
No 170
>PRK15011 sugar efflux transporter B; Provisional
Probab=92.95 E-value=0.62 Score=30.45 Aligned_cols=19 Identities=32% Similarity=0.504 Sum_probs=12.9
Q ss_pred HHHHHHHHhhhhchhHHHHH
Q psy7928 23 TTWIATMIVDRLGRRILLLV 42 (87)
Q Consensus 23 ~~~~~~~l~d~~gRr~~l~~ 42 (87)
+.+.+.+ .||.||||.++.
T Consensus 68 ~~~~~~~-~dr~g~r~~~~~ 86 (393)
T PRK15011 68 SQFLAGR-SDKRGDRKSLIV 86 (393)
T ss_pred HHHHHHH-HhcccchhHHHH
Confidence 3444555 899999986543
No 171
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=92.88 E-value=0.6 Score=34.55 Aligned_cols=42 Identities=17% Similarity=0.068 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 14 IIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
....+..+++.++..++.||.+||+++..+..+..++++.+.
T Consensus 276 ~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 317 (1146)
T PRK08633 276 AASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLP 317 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHH
Confidence 344555677888888999999988888777766666555443
No 172
>PRK11010 ampG muropeptide transporter; Validated
Probab=92.81 E-value=2.1 Score=29.15 Aligned_cols=34 Identities=29% Similarity=0.534 Sum_probs=24.3
Q ss_pred HHHHHHHHHhhhh-----chhHH-HHHHHHHHHHHHHHHH
Q psy7928 22 VTTWIATMIVDRL-----GRRIL-LLVSAVIMALSTLTMG 55 (87)
Q Consensus 22 ~~~~~~~~l~d~~-----gRr~~-l~~~~~~~~~~~~~~~ 55 (87)
...++.+.+.||+ |||+. ++.+.....++...++
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a 99 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMG 99 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHH
Confidence 5677888899999 99885 5566666656655554
No 173
>KOG0252|consensus
Probab=92.79 E-value=0.04 Score=37.81 Aligned_cols=37 Identities=19% Similarity=0.402 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 21 MVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 21 ~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
+++..+..+++|+.|||+..+-+...+++.+.+++..
T Consensus 362 vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~ 398 (538)
T KOG0252|consen 362 VPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGP 398 (538)
T ss_pred CCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCC
Confidence 3345556678999999999999999999998888754
No 174
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=92.63 E-value=0.79 Score=31.84 Aligned_cols=42 Identities=12% Similarity=0.091 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 15 IVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 15 ~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
.......+..+.++++.||+|-|+++..+...-.+...+...
T Consensus 70 ~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~f 111 (511)
T TIGR00806 70 VLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLL 111 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 344556777888999999999999999887766666555543
No 175
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=92.54 E-value=2 Score=28.22 Aligned_cols=28 Identities=21% Similarity=0.275 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRI 38 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~ 38 (87)
......+....++..+...+.||.+||.
T Consensus 256 ~~~~~~~~~~iig~~~~~~l~~r~~~~~ 283 (394)
T PRK10213 256 LVLLSFGIASFVGTSLSSFILKRSVKLA 283 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhH
Confidence 3344455667778888888888854443
No 176
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=92.42 E-value=2 Score=27.96 Aligned_cols=28 Identities=7% Similarity=-0.088 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRI 38 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~ 38 (87)
...........+.+++.+.+.||.|||.
T Consensus 43 ~~~s~~~~~~~~~~~~~g~l~d~~~~~~ 70 (382)
T TIGR00902 43 LLIGAALIARFAGGLFFAPLIKDANHII 70 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcHH
Confidence 3333456667777888888999999854
No 177
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=92.22 E-value=2.1 Score=27.80 Aligned_cols=27 Identities=7% Similarity=-0.150 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchh
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRR 37 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr 37 (87)
...........++.++.+.+.||+|||
T Consensus 43 ~~~~~~~l~~~l~~~~~g~l~dr~g~~ 69 (382)
T PRK11128 43 LLLGAGLVARFLGSLLIAPRVKDPSQL 69 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHHhhhcch
Confidence 344445566677788888999999984
No 178
>KOG2504|consensus
Probab=92.09 E-value=0.75 Score=31.80 Aligned_cols=47 Identities=13% Similarity=0.265 Sum_probs=35.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
..+...+...+.+...++...+.||+|.|+..+.|.......++.-.
T Consensus 83 ~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lss 129 (509)
T KOG2504|consen 83 IAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSS 129 (509)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 34455555666777778888899999999999999888887765433
No 179
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=92.08 E-value=2.5 Score=28.24 Aligned_cols=27 Identities=15% Similarity=0.091 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchh
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRR 37 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr 37 (87)
....+......++.+.++++.||.+||
T Consensus 301 ~~~~~~~~~~~i~~~~~g~l~d~~~~~ 327 (465)
T TIGR00894 301 LLSSLPYLFAWLCSIFAGYLADFLKSS 327 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 444455677788888999999988654
No 180
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=92.01 E-value=2.6 Score=28.22 Aligned_cols=28 Identities=14% Similarity=0.163 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh--chhHH
Q psy7928 12 CTIIVGTIMMVTTWIATMIVDRL--GRRIL 39 (87)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~d~~--gRr~~ 39 (87)
..........++.++++++.||+ +||+.
T Consensus 294 ~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~ 323 (452)
T PRK11273 294 AYFLYEYAGIPGTLLCGWMSDKVFRGNRGA 323 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcch
Confidence 33445566777888999999999 55543
No 181
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=91.97 E-value=1.6 Score=29.64 Aligned_cols=48 Identities=10% Similarity=0.185 Sum_probs=36.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
++.......-..-++..+...++++|+|+|+-++.+...+.+...++.
T Consensus 49 ~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~ 96 (422)
T COG0738 49 EASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFW 96 (422)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHh
Confidence 444455555556677778889999999999999999888887776664
No 182
>KOG2563|consensus
Probab=91.87 E-value=0.82 Score=31.43 Aligned_cols=49 Identities=18% Similarity=0.265 Sum_probs=39.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
...+.+.+...+.++..+.++|+.||+|=|..++.+....++...+-.+
T Consensus 80 ~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~i 128 (480)
T KOG2563|consen 80 AADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLI 128 (480)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhh
Confidence 3456777778888899999999999999999999988877776555443
No 183
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=91.59 E-value=1.8 Score=27.39 Aligned_cols=27 Identities=19% Similarity=0.099 Sum_probs=19.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLG 35 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~g 35 (87)
.............++.++..++.||..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~g~l~~r~~ 280 (379)
T TIGR00881 254 ASWAFTLYELGGLVGTLLAGWLSDKLF 280 (379)
T ss_pred HHHHHHHHHHHcchhHHHHHHHHHHHc
Confidence 334455566777888889999999863
No 184
>PRK09669 putative symporter YagG; Provisional
Probab=91.15 E-value=0.33 Score=32.28 Aligned_cols=37 Identities=30% Similarity=0.279 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHhhh----hchhH-HHHHHHHHHHHHHH
Q psy7928 16 VGTIMMVTTWIATMIVDR----LGRRI-LLLVSAVIMALSTL 52 (87)
Q Consensus 16 ~~~~~~~~~~~~~~l~d~----~gRr~-~l~~~~~~~~~~~~ 52 (87)
..++..+..++.+++.|| +|||| .++.+.....++..
T Consensus 54 ~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~ 95 (444)
T PRK09669 54 VRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCL 95 (444)
T ss_pred HHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHH
Confidence 334455566677788998 77754 55566565555543
No 185
>PRK09848 glucuronide transporter; Provisional
Probab=90.96 E-value=0.91 Score=30.21 Aligned_cols=39 Identities=15% Similarity=0.196 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh----chhHHH-HHHHHHHHHH
Q psy7928 12 CTIIVGTIMMVTTWIATMIVDRL----GRRILL-LVSAVIMALS 50 (87)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~d~~----gRr~~l-~~~~~~~~~~ 50 (87)
..........+..++.+++.||. ||||.. ..+.....+.
T Consensus 49 ~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~ 92 (448)
T PRK09848 49 MLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIF 92 (448)
T ss_pred HHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHH
Confidence 33445566677788888999996 777754 4444444433
No 186
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=90.37 E-value=4.3 Score=27.90 Aligned_cols=38 Identities=21% Similarity=0.237 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMA 48 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~ 48 (87)
....+..+++.+..++-+.+.|+-+|||.++......+
T Consensus 74 ~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~ 111 (477)
T PF11700_consen 74 YANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLG 111 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHH
Confidence 34455666667777777778999988886666554443
No 187
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=90.29 E-value=1.8 Score=29.43 Aligned_cols=53 Identities=15% Similarity=0.201 Sum_probs=34.5
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 3 HGVLWNPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
++++ |......+-.....+.=++-+++.||+|.|++...+.....+-.+.++.
T Consensus 46 LS~~-q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~ 98 (417)
T COG2223 46 LSEG-QKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAF 98 (417)
T ss_pred CCHH-HHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHH
Confidence 3444 3444444444445555555678899999999999888777666555543
No 188
>PRK11663 regulatory protein UhpC; Provisional
Probab=90.06 E-value=4.1 Score=27.10 Aligned_cols=25 Identities=16% Similarity=0.078 Sum_probs=19.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhh
Q psy7928 10 NLCTIIVGTIMMVTTWIATMIVDRL 34 (87)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~d~~ 34 (87)
............++.++++++.||+
T Consensus 282 ~~~~~~~~~~~~~g~~~~g~l~dr~ 306 (434)
T PRK11663 282 NSAVSMFELGGFIGALVAGWGSDKL 306 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 3444455677888899999999998
No 189
>KOG2532|consensus
Probab=89.80 E-value=3.8 Score=28.15 Aligned_cols=34 Identities=21% Similarity=0.284 Sum_probs=26.1
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhch
Q psy7928 2 GHGVLWNPNLCTIIVGTIMMVTTWIATMIVDRLGR 36 (87)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gR 36 (87)
|++.+ +.-..+.+-...+.+..++++.+.||..+
T Consensus 290 ~f~v~-~~G~~salP~l~~~~~k~~~g~lsD~l~~ 323 (466)
T KOG2532|consen 290 GFDVR-ETGFLSALPFLAMAIVKFVAGQLSDRLTF 323 (466)
T ss_pred CCChh-hhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45555 55566777788889999999999998865
No 190
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=89.64 E-value=2.8 Score=24.53 Aligned_cols=40 Identities=18% Similarity=0.284 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7928 10 NLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMAL 49 (87)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~ 49 (87)
.....+......+.++++..+++++|.|+.++.+.....+
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~ 79 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAI 79 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4455556666778888889999999999999888765553
No 191
>KOG2532|consensus
Probab=89.49 E-value=3.4 Score=28.36 Aligned_cols=41 Identities=22% Similarity=0.216 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 17 GTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 17 ~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
..-.+++++.+.++.||+|-|+++..+....++...+.-..
T Consensus 83 ~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~a 123 (466)
T KOG2532|consen 83 FWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLA 123 (466)
T ss_pred HHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHH
Confidence 34456677778999999999999999888777776655443
No 192
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=89.34 E-value=3.9 Score=26.87 Aligned_cols=34 Identities=15% Similarity=-0.022 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSA 44 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~ 44 (87)
.......+...++.+....+.||.++|+....+.
T Consensus 245 ~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~ 278 (393)
T PRK11195 245 YLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI 278 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH
Confidence 3344455666777777778888888887766653
No 193
>PF13347 MFS_2: MFS/sugar transport protein
Probab=89.20 E-value=0.078 Score=35.05 Aligned_cols=38 Identities=29% Similarity=0.379 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHhh----hhchhHH-HHHHHHHHHHHHHHHH
Q psy7928 18 TIMMVTTWIATMIVD----RLGRRIL-LLVSAVIMALSTLTMG 55 (87)
Q Consensus 18 ~~~~~~~~~~~~l~d----~~gRr~~-l~~~~~~~~~~~~~~~ 55 (87)
.+..+..++-+++.| |+||||. ++.+.....++...+.
T Consensus 48 i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf 90 (428)
T PF13347_consen 48 IWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLF 90 (428)
T ss_pred HhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhh
Confidence 333444446667889 7997774 4456677777665554
No 194
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=88.12 E-value=0.85 Score=30.83 Aligned_cols=33 Identities=18% Similarity=0.114 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHH
Q psy7928 12 CTIIVGTIMMVTTWIATMIVDRLGRRILLLVSA 44 (87)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~ 44 (87)
.-.+.....++.+++.+.+.||.|.||-++...
T Consensus 48 i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i 80 (412)
T PF01306_consen 48 IFSAGSLFALLAQPVYGFISDKLGLKKHLLWFI 80 (412)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHH
Confidence 333455677888888899999999766555433
No 195
>KOG0255|consensus
Probab=87.96 E-value=4.5 Score=27.56 Aligned_cols=49 Identities=18% Similarity=0.353 Sum_probs=37.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
........+....+.........|+.|||.....+.....++.+..+..
T Consensus 352 ~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~ 400 (521)
T KOG0255|consen 352 IYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWL 400 (521)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHh
Confidence 3444445555777777788889999999999999998888887776654
No 196
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=87.84 E-value=3.6 Score=29.51 Aligned_cols=41 Identities=17% Similarity=0.352 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHhhh-hchhHHHHHHHHHHHHHHHHHHH
Q psy7928 16 VGTIMMVTTWIATMIVDR-LGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 16 ~~~~~~~~~~~~~~l~d~-~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
......+..++++++.|+ +||++.+..+.....+...++++
T Consensus 32 f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai 73 (654)
T TIGR00926 32 FTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSF 73 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 334445555677888885 79999998888877777766654
No 197
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=87.18 E-value=4.7 Score=27.41 Aligned_cols=51 Identities=14% Similarity=0.111 Sum_probs=35.4
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHH
Q psy7928 2 GHGVLWNPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLT 53 (87)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~ 53 (87)
|++.. +.-......++...++........+|++.|+++..+.....+....
T Consensus 284 G~s~~-~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~ 334 (468)
T TIGR00788 284 PGGPS-FSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLF 334 (468)
T ss_pred CCCcc-hhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhC
Confidence 34444 3444445566777777777777788999999999888777766533
No 198
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=87.11 E-value=7.2 Score=26.26 Aligned_cols=23 Identities=13% Similarity=0.138 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDR 33 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~ 33 (87)
....+.+....++.+.++++.||
T Consensus 280 ~~~~~~~~~~~~~~~~~g~l~d~ 302 (455)
T TIGR00892 280 FLLSIIGFVDIFARPSCGLIAGL 302 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc
Confidence 34444566667777778888886
No 199
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=87.07 E-value=8 Score=26.99 Aligned_cols=42 Identities=21% Similarity=0.380 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 15 IVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 15 ~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
..++-.+++.+....+.+|.++++++..+....++++..++.
T Consensus 262 ~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal 303 (524)
T PF05977_consen 262 AFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLAL 303 (524)
T ss_pred HHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhc
Confidence 445555666666667777888888888887777777666654
No 200
>KOG4686|consensus
Probab=85.69 E-value=4.1 Score=27.13 Aligned_cols=29 Identities=28% Similarity=0.229 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHhhhhchhHHHHHHH
Q psy7928 16 VGTIMMVTTWIATMIVDRLGRRILLLVSA 44 (87)
Q Consensus 16 ~~~~~~~~~~~~~~l~d~~gRr~~l~~~~ 44 (87)
...+..+.+++.+.++||.||+-+...+.
T Consensus 309 vy~Isav~spvfg~i~Dk~G~n~~wv~~a 337 (459)
T KOG4686|consen 309 VYGISAVLSPVFGAISDKYGFNLWWVASA 337 (459)
T ss_pred hhhhhhhhhhhHHHhHhhhcceehhHHHH
Confidence 34555666777888999999987665544
No 201
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=85.00 E-value=10 Score=26.13 Aligned_cols=45 Identities=20% Similarity=0.279 Sum_probs=29.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhh--chhHHHHHH-HHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRL--GRRILLLVS-AVIMALSTL 52 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~--gRr~~l~~~-~~~~~~~~~ 52 (87)
++.......=...++++++++|+.||+ |||...... ..+..+++.
T Consensus 289 ~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~ 336 (448)
T COG2271 289 KANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLV 336 (448)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH
Confidence 444555556677899999999999996 677654333 334444433
No 202
>PRK11462 putative transporter; Provisional
Probab=84.68 E-value=7.7 Score=26.27 Aligned_cols=35 Identities=14% Similarity=0.207 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHhhh----hchhH-HHHHHHHHHHHHHHHH
Q psy7928 20 MMVTTWIATMIVDR----LGRRI-LLLVSAVIMALSTLTM 54 (87)
Q Consensus 20 ~~~~~~~~~~l~d~----~gRr~-~l~~~~~~~~~~~~~~ 54 (87)
-.+.-++-++++|| +|||| .++.+.....++...+
T Consensus 58 Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ll 97 (460)
T PRK11462 58 DAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLA 97 (460)
T ss_pred HHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHH
Confidence 34555666788896 67765 5555656666665443
No 203
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=84.66 E-value=5.7 Score=27.32 Aligned_cols=41 Identities=15% Similarity=0.364 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 17 GTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 17 ~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
...-=++-++.+.+.||.+.|..+-.+....++..++++..
T Consensus 74 ~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs 114 (448)
T COG2271 74 SITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFS 114 (448)
T ss_pred HHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhh
Confidence 33444555677889999999999999999999988888754
No 204
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=84.18 E-value=11 Score=25.69 Aligned_cols=23 Identities=22% Similarity=0.325 Sum_probs=15.7
Q ss_pred HHHHHHhhhhc-----hhHHHHHHHHHH
Q psy7928 25 WIATMIVDRLG-----RRILLLVSAVIM 47 (87)
Q Consensus 25 ~~~~~l~d~~g-----Rr~~l~~~~~~~ 47 (87)
++.+.+.|+++ ||+.++.+....
T Consensus 78 ~l~g~l~D~~~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 78 PFAGVMSDTFPLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHhcCCCCccchHHHHHHHHHH
Confidence 34677999997 666666665544
No 205
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=83.75 E-value=6.3 Score=23.47 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHH
Q psy7928 12 CTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVI 46 (87)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~ 46 (87)
...........+.+..+.+.||.|||+.+..+...
T Consensus 44 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 78 (338)
T COG0477 44 LLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLL 78 (338)
T ss_pred HHHHHHHHHHHHhhhhhhccccccchHHHHHHHHH
Confidence 33344455555667788899999999877776654
No 206
>PRK10054 putative transporter; Provisional
Probab=83.56 E-value=4 Score=26.86 Aligned_cols=32 Identities=6% Similarity=0.121 Sum_probs=21.1
Q ss_pred HHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 23 TTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 23 ~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
.........||.+||+.+..+.....+....+
T Consensus 260 ~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~ 291 (395)
T PRK10054 260 LQYSVGRRLNAANIRPLMTAGTLCFVIGLVGF 291 (395)
T ss_pred ehhHHHHHHccCCchhHHHHHHHHHHHHHHHH
Confidence 33445577899999998877765555544333
No 207
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=81.22 E-value=15 Score=25.09 Aligned_cols=55 Identities=18% Similarity=0.180 Sum_probs=38.0
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHH-HhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 2 GHGVLWNPNLCTIIVGTIMMVTTWIATM-IVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
|++.. ++...+...+.-.+++-...++ +.++.+++++..+++.....++..+...
T Consensus 240 gmsv~-eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a 295 (403)
T PF03209_consen 240 GMSVG-ETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILA 295 (403)
T ss_pred CCCHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 44554 5666666676666777766665 4457888888888888888887666544
No 208
>KOG2816|consensus
Probab=80.07 E-value=7.2 Score=26.86 Aligned_cols=38 Identities=24% Similarity=0.494 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 17 GTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 17 ~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
+...++-+..-+.+.|++|||..+.....+..+.-..+
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~ 109 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCL 109 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHH
Confidence 44555566666778999999999988877666554443
No 209
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=79.57 E-value=13 Score=24.91 Aligned_cols=35 Identities=17% Similarity=0.130 Sum_probs=26.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVS 43 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~ 43 (87)
........++...+++.+++++.|++|.|.+.-+.
T Consensus 340 ~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~ 374 (400)
T PF03825_consen 340 GLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWS 374 (400)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHH
Confidence 33445556788899999999999999988755443
No 210
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=79.28 E-value=15 Score=23.92 Aligned_cols=17 Identities=12% Similarity=0.354 Sum_probs=8.1
Q ss_pred HHHHHHHHHHhhhhchh
Q psy7928 21 MVTTWIATMIVDRLGRR 37 (87)
Q Consensus 21 ~~~~~~~~~l~d~~gRr 37 (87)
.++.+++..+.+|++||
T Consensus 253 ~~~~~~g~~~~~~l~~~ 269 (394)
T PRK11652 253 IPAAFFGAWFAGRPNKR 269 (394)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34444444555555444
No 211
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=79.19 E-value=11 Score=22.59 Aligned_cols=43 Identities=19% Similarity=0.360 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q psy7928 13 TIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
........+++.++-..+..|++||....+.....++.+..++
T Consensus 34 ~~~~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G 76 (186)
T PF09605_consen 34 LFMPAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLMG 76 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHh
Confidence 3334455667777777889999999988777766666655554
No 212
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=79.04 E-value=18 Score=24.72 Aligned_cols=39 Identities=26% Similarity=0.584 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 18 TIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 18 ~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
+...+.-.+..++++|+|.|+.++.+..++.+-....+.
T Consensus 270 ~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~ 308 (412)
T PF01306_consen 270 FLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGF 308 (412)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhh
Confidence 444555556678999999999999998888888766553
No 213
>KOG2533|consensus
Probab=75.81 E-value=8.2 Score=26.84 Aligned_cols=39 Identities=26% Similarity=0.336 Sum_probs=28.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhh----hchhHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDR----LGRRILLLVSAVI 46 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~----~gRr~~l~~~~~~ 46 (87)
++...++...+...++.++++++.|| ..||.+.......
T Consensus 310 ~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 310 QANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL 352 (495)
T ss_pred HhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 45566777788899999999999999 5566655554433
No 214
>KOG0253|consensus
Probab=74.85 E-value=4.1 Score=28.05 Aligned_cols=36 Identities=19% Similarity=0.191 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHH
Q psy7928 16 VGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALST 51 (87)
Q Consensus 16 ~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~ 51 (87)
..+-..++....+...|++|||+....+....++.-
T Consensus 122 v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~ 157 (528)
T KOG0253|consen 122 VFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFG 157 (528)
T ss_pred HHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHH
Confidence 334445555556667899999998888776555443
No 215
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=74.18 E-value=22 Score=26.84 Aligned_cols=41 Identities=15% Similarity=0.212 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHH
Q psy7928 12 CTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTL 52 (87)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~ 52 (87)
......+...++.+..+++.|+.++++....+..+..+...
T Consensus 266 ~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 306 (1140)
T PRK06814 266 FLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGL 306 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHH
Confidence 33445566777888888888777766655555544444433
No 216
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=73.94 E-value=26 Score=24.11 Aligned_cols=44 Identities=18% Similarity=0.159 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchhH-------HHHHHHHHHHHHHHHHH
Q psy7928 12 CTIIVGTIMMVTTWIATMIVDRLGRRI-------LLLVSAVIMALSTLTMG 55 (87)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~d~~gRr~-------~l~~~~~~~~~~~~~~~ 55 (87)
.+........+..++...+.||.+||+ -...|.....+++..++
T Consensus 314 ~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~ 364 (489)
T PRK10207 314 FQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAA 364 (489)
T ss_pred HHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 333344455566777778999999886 35556666666655443
No 217
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=71.97 E-value=5.8 Score=27.92 Aligned_cols=32 Identities=19% Similarity=0.394 Sum_probs=21.0
Q ss_pred HHHHhhhhchhHHHHH-HHHHHHHHHHHHHHHh
Q psy7928 27 ATMIVDRLGRRILLLV-SAVIMALSTLTMGYYF 58 (87)
Q Consensus 27 ~~~l~d~~gRr~~l~~-~~~~~~~~~~~~~~~~ 58 (87)
-....+|+||||-.++ ....+++.++.++...
T Consensus 60 Ds~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~~i 92 (544)
T PF13000_consen 60 DSVYSKRIGRRKSWIIPIQYLSGILMLYLSYNI 92 (544)
T ss_pred hhhcccccCCcchhhhHHHHHHHHHHHHHHhcc
Confidence 3456678999985554 4467777777666443
No 218
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=71.43 E-value=30 Score=24.03 Aligned_cols=41 Identities=12% Similarity=0.158 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhch-hHHHHHHHHHHHHHHHHHH
Q psy7928 15 IVGTIMMVTTWIATMIVDRLGR-RILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 15 ~~~~~~~~~~~~~~~l~d~~gR-r~~l~~~~~~~~~~~~~~~ 55 (87)
...+...+.++.-..+.+++|+ |+++..+....++++....
T Consensus 313 ~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~ 354 (477)
T TIGR01301 313 LNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATV 354 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Confidence 3444445555556677889984 6777777666666655444
No 219
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=70.29 E-value=12 Score=26.72 Aligned_cols=35 Identities=14% Similarity=0.130 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhhhhc--hhHHHHHHHHHHHHHHHH
Q psy7928 19 IMMVTTWIATMIVDRLG--RRILLLVSAVIMALSTLT 53 (87)
Q Consensus 19 ~~~~~~~~~~~l~d~~g--Rr~~l~~~~~~~~~~~~~ 53 (87)
...++.+++++++||++ .|+.+..+.....+++..
T Consensus 379 ~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 379 AAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 34678888999999988 456666666655555443
No 220
>PF06898 YqfD: Putative stage IV sporulation protein YqfD; InterPro: IPR010690 This family consists of several putative bacterial stage IV sporulation (SpoIV) proteins. YqfD of Bacillus subtilis (P54469 from SWISSPROT) is known to be essential for efficient sporulation although its exact function is unknown [].
Probab=68.74 E-value=6.2 Score=26.46 Aligned_cols=33 Identities=15% Similarity=0.303 Sum_probs=27.0
Q ss_pred HHHhhhhchhHHHHHHHHHHHHHHHHHHHHhhc
Q psy7928 28 TMIVDRLGRRILLLVSAVIMALSTLTMGYYFYL 60 (87)
Q Consensus 28 ~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~~~~ 60 (87)
.+...|+.||+.++.|...+.+.+..++.+.+.
T Consensus 78 pF~~~r~~~R~~~~~G~~~f~~~l~~lS~fIW~ 110 (385)
T PF06898_consen 78 PFFLKRLRRRKGFVAGIVLFLALLYILSSFIWS 110 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCeEEE
Confidence 456788999999999999998888888876543
No 221
>TIGR02876 spore_yqfD sporulation protein YqfD. YqfD is part of the sigma-E regulon in the sporulation program of endospore-forming Gram-positive bacteria. Mutation results in a sporulation defect in Bacillus subtilis. Members are found in all currently known endospore-forming bacteria, including the genera Bacillus, Symbiobacterium, Carboxydothermus, Clostridium, and Thermoanaerobacter.
Probab=68.22 E-value=6.7 Score=26.33 Aligned_cols=32 Identities=13% Similarity=0.361 Sum_probs=26.9
Q ss_pred HHHhhhhchhHHHHHHHHHHHHHHHHHHHHhh
Q psy7928 28 TMIVDRLGRRILLLVSAVIMALSTLTMGYYFY 59 (87)
Q Consensus 28 ~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~~~ 59 (87)
.++..|+.||+.+..|.+.+.+.+..++.+.+
T Consensus 75 pF~~~r~~kRk~~~~G~~~f~~ll~~lS~fIW 106 (382)
T TIGR02876 75 PFLFKRLRKRPGILIGILLFLAIVYFLSNFIW 106 (382)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhheEE
Confidence 35678899999999999999988888887655
No 222
>PF07698 7TM-7TMR_HD: 7TM receptor with intracellular HD hydrolase; InterPro: IPR011621 These bacterial 7TM receptor proteins have an intracellular domain IPR006674 from INTERPRO. This entry corresponds to the 7 helix transmembrane domain. These proteins also contain an N-terminal extracellular domain.
Probab=66.48 E-value=25 Score=20.87 Aligned_cols=40 Identities=18% Similarity=0.212 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 18 TIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 18 ~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
...++++..+.+.++|.+||.-++......++........
T Consensus 108 ~~~l~~~~~~~~~~~~~~~R~~~i~ag~~v~l~~~~~~l~ 147 (194)
T PF07698_consen 108 LYSLVSGIVAIFSVRRIRSRSDIIKAGLLVGLVNALMILA 147 (194)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788889999999999987766665555544444433
No 223
>PF01788 PsbJ: PsbJ; InterPro: IPR002682 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbJ found in PSII. PsbJ is one of the most hydrophobic proteins in the thylakoid membrane, and is located in a gene cluster with PsbE, PsbF and PsbL (PsbEFJL). Both PsbJ and PsbL (IPR003372 from INTERPRO) are essential for proper assembly of the OEC. Mutations in PsbJ cause the light-harvesting antenna to remain detached from the PSII dimers []. In addition, both PsbJ and PsbL are involved in the unidirectional flow of electrons, where PsbJ regulates the forward electron flow from D2 (Qa) to the plastoquinone pool, and PsbL prevents the reduction of PSII by back electron flow from plastoquinol protecting PSII from photo-inactivation [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3A0H_J 3ARC_J 3A0B_J 3KZI_J 2AXT_J 3PRQ_J 4FBY_b 3BZ2_J 1S5L_j 3PRR_J ....
Probab=65.01 E-value=12 Score=16.79 Aligned_cols=28 Identities=29% Similarity=0.345 Sum_probs=16.7
Q ss_pred hhhhchhHHHHHHHHHHHHHHHHHHHHh
Q psy7928 31 VDRLGRRILLLVSAVIMALSTLTMGYYF 58 (87)
Q Consensus 31 ~d~~gRr~~l~~~~~~~~~~~~~~~~~~ 58 (87)
.|.-||-++.+++...-....-++++++
T Consensus 2 ~~ttGRIPLWlVgtv~G~~vi~lvglFf 29 (40)
T PF01788_consen 2 ANTTGRIPLWLVGTVAGIAVIGLVGLFF 29 (40)
T ss_dssp ---TTSS-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccchHHHHHHHHHHHHHHHHhe
Confidence 3567888888888766666656666554
No 224
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=64.17 E-value=27 Score=20.47 Aligned_cols=43 Identities=12% Similarity=0.138 Sum_probs=34.3
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHH
Q psy7928 1 MGHGVLWNPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSA 44 (87)
Q Consensus 1 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~ 44 (87)
+|++.+ +.+..+.+....-+++-+++.++.++.++-..+..-.
T Consensus 67 iGi~Ek-slL~sA~LvYi~PL~~l~v~~~La~~L~~~e~~~~~~ 109 (150)
T COG3086 67 LGIEEK-SLLKSALLVYIFPLVGLFLGAILAQYLFFSELIVIFG 109 (150)
T ss_pred EccCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 467776 7888888888988999999999999988876554433
No 225
>KOG4332|consensus
Probab=61.91 E-value=5.2 Score=26.43 Aligned_cols=26 Identities=23% Similarity=0.309 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHH
Q psy7928 13 TIIVGTIMMVTTWIATMIVDRLGRRIL 39 (87)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~d~~gRr~~ 39 (87)
....+...+++++ .+-++||-|||+.
T Consensus 79 iaGfgSsmLFGti-vgSLaDkqGRKra 104 (454)
T KOG4332|consen 79 IAGFGSSMLFGTI-VGSLADKQGRKRA 104 (454)
T ss_pred ecccchHHHHHHH-HHHHHhhhccccc
Confidence 3334444555554 4458999999973
No 226
>PF09788 Tmemb_55A: Transmembrane protein 55A; InterPro: IPR019178 Members of this family catalyse the hydrolysis of the 4-position phosphate of phosphatidylinositol 4,5-bisphosphate, in the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H(2)O = 1-phosphatidyl-1D-myo-inositol 5-phosphate + phosphate.
Probab=60.79 E-value=33 Score=21.96 Aligned_cols=23 Identities=13% Similarity=0.340 Sum_probs=12.7
Q ss_pred hhchhHHHHHHHHHHHHHHHHHH
Q psy7928 33 RLGRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 33 ~~gRr~~l~~~~~~~~~~~~~~~ 55 (87)
++.||+.++....+..+..+.++
T Consensus 192 ~faRkR~i~f~llgllfliiaig 214 (256)
T PF09788_consen 192 RFARKRAIIFFLLGLLFLIIAIG 214 (256)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHH
Confidence 57777766665544444444433
No 227
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=60.45 E-value=50 Score=22.37 Aligned_cols=48 Identities=13% Similarity=0.209 Sum_probs=25.4
Q ss_pred hhHHHHHHHHHHHHHH--HHHHHHhhhh-----chhHHHHHHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTT--WIATMIVDRL-----GRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~--~~~~~l~d~~-----gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
+...+......+++-. ++-+.+.|-+ +||+-++.+.....++...++.
T Consensus 24 ~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~ 78 (433)
T PF03092_consen 24 PAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLAL 78 (433)
T ss_pred HHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHh
Confidence 3344444455554444 3445678876 3455555566555555555544
No 228
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=60.37 E-value=18 Score=19.06 Aligned_cols=22 Identities=18% Similarity=0.397 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHhhhhchh
Q psy7928 16 VGTIMMVTTWIATMIVDRLGRR 37 (87)
Q Consensus 16 ~~~~~~~~~~~~~~l~d~~gRr 37 (87)
.-...++...+.+.+.||.+||
T Consensus 84 ~~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 84 TFAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHhhC
Confidence 3455566667778888888886
No 229
>PF05546 She9_MDM33: She9 / Mdm33 family; InterPro: IPR008839 Members of this family are mitochondrial inner membrane proteins with a role in inner mitochondrial membrane organisation and biogenesis []. The yeast Mdm33 protein assembles into an oligomeric complex in the inner membrane where it performs homotypic protein-protein interactions. It has been suggested that Mdm33 plays a distinct role, possibly involved in fission of the mitochondrial inner membrane [].
Probab=59.71 E-value=25 Score=21.79 Aligned_cols=31 Identities=19% Similarity=0.202 Sum_probs=18.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhchhHHH
Q psy7928 10 NLCTIIVGTIMMVTTWIATMIVDRLGRRILL 40 (87)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l 40 (87)
.+.+.+...++++--++.-.+++.+.||++.
T Consensus 152 TwgT~~lmgvNvllFl~~~~~~EPwkRrRLv 182 (207)
T PF05546_consen 152 TWGTWGLMGVNVLLFLVAQLLVEPWKRRRLV 182 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 3444444455555555566677778777765
No 230
>KOG2504|consensus
Probab=59.71 E-value=58 Score=22.82 Aligned_cols=49 Identities=20% Similarity=0.369 Sum_probs=34.5
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhc--hhHHHHHHHHHHHHHH
Q psy7928 2 GHGVLWNPNLCTIIVGTIMMVTTWIATMIVDRLG--RRILLLVSAVIMALST 51 (87)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g--Rr~~l~~~~~~~~~~~ 51 (87)
|++.+ +......+.+....++-++.+++.|+.. ++.+...+....+++.
T Consensus 329 g~~~~-~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~ 379 (509)
T KOG2504|consen 329 GLSSN-DAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLAR 379 (509)
T ss_pred CCChh-hhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHH
Confidence 44554 6667777788889999999999999987 4445555555555554
No 231
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=59.24 E-value=56 Score=22.49 Aligned_cols=44 Identities=14% Similarity=0.035 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 14 IIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
....+..+.++....++.+|+|-.|.=+++...+..++..-...
T Consensus 300 ~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~ 343 (432)
T PF06963_consen 300 GLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVS 343 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHH
Confidence 34556788889999999999999998888888777776544433
No 232
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=58.81 E-value=59 Score=22.65 Aligned_cols=39 Identities=13% Similarity=0.142 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHHhh
Q psy7928 21 MVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYYFY 59 (87)
Q Consensus 21 ~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~~~ 59 (87)
.+..++-.++.+|++||++.-.........+.+++...+
T Consensus 58 ~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~ 96 (472)
T TIGR00769 58 VIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIY 96 (472)
T ss_pred HHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHh
Confidence 333566678999999999988877777777777665544
No 233
>TIGR02185 Trep_Strep conserved hypothetical integral membrane protein TIGR02185. This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.
Probab=56.17 E-value=43 Score=20.20 Aligned_cols=36 Identities=14% Similarity=0.314 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7928 15 IVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALS 50 (87)
Q Consensus 15 ~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~ 50 (87)
......+++.++-..+..|++||-...+.....++.
T Consensus 38 ~p~i~al~~g~vyml~~~KV~K~G~~~i~~~i~gl~ 73 (189)
T TIGR02185 38 SPGITAFLVGIIFFLMVAKVPKRGVIFIFGILLGLL 73 (189)
T ss_pred HHHHHHHHHhHHHhhhhhhcCCccHHHHHHHHHHHH
Confidence 344555666666777889999998776666554443
No 234
>COG1470 Predicted membrane protein [Function unknown]
Probab=54.55 E-value=14 Score=25.75 Aligned_cols=10 Identities=30% Similarity=0.919 Sum_probs=8.4
Q ss_pred HHHhhhhchh
Q psy7928 28 TMIVDRLGRR 37 (87)
Q Consensus 28 ~~l~d~~gRr 37 (87)
.++++|+|||
T Consensus 504 ~fviRK~GRR 513 (513)
T COG1470 504 IFVIRKFGRR 513 (513)
T ss_pred HhhhHHhcCC
Confidence 4588999998
No 235
>KOG3098|consensus
Probab=54.32 E-value=72 Score=22.27 Aligned_cols=43 Identities=23% Similarity=0.237 Sum_probs=34.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALST 51 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~ 51 (87)
-.....+......+.+++++.++|+.+.|..+..+........
T Consensus 52 Gy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~ 94 (461)
T KOG3098|consen 52 GYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFP 94 (461)
T ss_pred cHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHH
Confidence 3455677778888999999999999999999998877655543
No 236
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=49.30 E-value=88 Score=21.79 Aligned_cols=43 Identities=23% Similarity=0.196 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHH-HHHHHHHHHH
Q psy7928 13 TIIVGTIMMVTTWIATMIVDRLGRRILLLVSAV-IMALSTLTMG 55 (87)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~-~~~~~~~~~~ 55 (87)
..+.+....+-.++-+-.+|.-|+||-.+-.+. ...+++..++
T Consensus 64 ~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~ 107 (438)
T COG2270 64 SAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLW 107 (438)
T ss_pred HHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHH
Confidence 334455555555555667899988776665554 3344444444
No 237
>COG0109 CyoE Polyprenyltransferase (cytochrome oxidase assembly factor) [Posttranslational modification, protein turnover, chaperones]
Probab=47.85 E-value=73 Score=21.02 Aligned_cols=42 Identities=14% Similarity=0.146 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccCCCCccccchHHHHHHHHHHHHhc
Q psy7928 37 RILLLVSAVIMALSTLTMGYYFYLKNSGSDVSNIGWLPLGSLCVFIIVFS 86 (87)
Q Consensus 37 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (87)
|..+..+.....++...+.... +.-..++....+++|.+.|+
T Consensus 99 ~~al~fgl~L~~~g~~~l~~~v--------n~laa~l~~~gi~~Yv~vYT 140 (304)
T COG0109 99 REALAFGLVLGVAGFSLLWFLV--------NLLAAVLGLFGIFFYVVVYT 140 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHhhhhh
Confidence 4567777777777766664432 23356777777888887775
No 238
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=47.79 E-value=1.1e+02 Score=22.26 Aligned_cols=37 Identities=14% Similarity=0.143 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHH-HHHHHHHHH
Q psy7928 13 TIIVGTIMMVTTWIATMIVDRLGRRILL-LVSAVIMAL 49 (87)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~d~~gRr~~l-~~~~~~~~~ 49 (87)
+...+.....+.++...+..++||-|.. +.+...+.+
T Consensus 355 s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta 392 (599)
T PF06609_consen 355 SSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTA 392 (599)
T ss_pred hhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHH
Confidence 3334455556666667778888876655 455444443
No 239
>KOG0637|consensus
Probab=45.35 E-value=4.8 Score=27.98 Aligned_cols=38 Identities=21% Similarity=0.374 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHhhh----hchhHHHHHHH-HHHHHHHHHHH
Q psy7928 18 TIMMVTTWIATMIVDR----LGRRILLLVSA-VIMALSTLTMG 55 (87)
Q Consensus 18 ~~~~~~~~~~~~l~d~----~gRr~~l~~~~-~~~~~~~~~~~ 55 (87)
+..++.+++.+...|| +||||..+... ....+++.++.
T Consensus 78 i~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig 120 (498)
T KOG0637|consen 78 LSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIG 120 (498)
T ss_pred cccceecccccccccccccccccccchHHHhhHHHHHHHhhhh
Confidence 3455566666677775 78888777665 44445554444
No 240
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.76 E-value=47 Score=19.50 Aligned_cols=21 Identities=14% Similarity=0.267 Sum_probs=8.7
Q ss_pred HHHHHHHHHhhhhchhHHHHH
Q psy7928 22 VTTWIATMIVDRLGRRILLLV 42 (87)
Q Consensus 22 ~~~~~~~~l~d~~gRr~~l~~ 42 (87)
+..........|.|--.....
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l 101 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIAL 101 (150)
T ss_pred hhhhhhHHhccchhHHHHHHH
Confidence 333333444444544443333
No 241
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=44.62 E-value=91 Score=20.59 Aligned_cols=28 Identities=25% Similarity=0.299 Sum_probs=15.2
Q ss_pred HHHHhhhhchhHHHHHHHHHHHHHHHHH
Q psy7928 27 ATMIVDRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 27 ~~~l~d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
+.+..||++.|+.+..+.....+....+
T Consensus 264 ~~~~~~r~~~~~~~~~~~~~~~~~~~~l 291 (400)
T PRK11646 264 ARWSEKRFRLEHRLMAGLLIMSLSMFPI 291 (400)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence 3344455666666666655555554444
No 242
>KOG1330|consensus
Probab=44.44 E-value=84 Score=22.23 Aligned_cols=33 Identities=12% Similarity=0.032 Sum_probs=23.9
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhch
Q psy7928 3 HGVLWNPNLCTIIVGTIMMVTTWIATMIVDRLGR 36 (87)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gR 36 (87)
++.+ .......++.....++++.|+.+.||+.|
T Consensus 280 ~~~~-~~~ifg~vt~~~G~lGvl~Ggiisd~~~~ 312 (493)
T KOG1330|consen 280 FDHN-ATLIFGGVTCAGGSLGVLFGGIISDKLSR 312 (493)
T ss_pred Cccc-cchhhhhHHHhhchhhheehHHHHHHHHH
Confidence 3444 55566667778888999999999998543
No 243
>KOG3762|consensus
Probab=43.86 E-value=31 Score=24.85 Aligned_cols=41 Identities=15% Similarity=0.180 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHH
Q psy7928 17 GTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 17 ~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~ 57 (87)
++-.-+++++++.+++++|-|+..-+-..++.+.+......
T Consensus 506 GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 506 GLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred ccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 44456789999999999999998888777776666555544
No 244
>KOG3574|consensus
Probab=42.97 E-value=22 Score=24.73 Aligned_cols=28 Identities=36% Similarity=0.536 Sum_probs=16.5
Q ss_pred HHHhh-----hhchhHHHHHH-HHHHHHHHHHHH
Q psy7928 28 TMIVD-----RLGRRILLLVS-AVIMALSTLTMG 55 (87)
Q Consensus 28 ~~l~d-----~~gRr~~l~~~-~~~~~~~~~~~~ 55 (87)
+.++| ++||||..++- ..+.+..+..++
T Consensus 84 aPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs 117 (510)
T KOG3574|consen 84 APIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLS 117 (510)
T ss_pred HhhhHHHHHHhhccccceeeehHHHHHHHHHHHh
Confidence 34666 99999865543 344444444444
No 245
>COG4708 Predicted membrane protein [Function unknown]
Probab=42.73 E-value=63 Score=19.08 Aligned_cols=21 Identities=29% Similarity=0.635 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHhhhhchh
Q psy7928 17 GTIMMVTTWIATMIVDRLGRR 37 (87)
Q Consensus 17 ~~~~~~~~~~~~~l~d~~gRr 37 (87)
+...+....+++.++|+.+||
T Consensus 144 a~gEfvsl~vg~~~m~kl~kr 164 (169)
T COG4708 144 ALGEFVSLYVGALIMDKLGKR 164 (169)
T ss_pred HHHHHHHHHhhHHHHHHHHhh
Confidence 344555566667777777776
No 246
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=40.95 E-value=46 Score=16.16 Aligned_cols=21 Identities=10% Similarity=0.365 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q psy7928 12 CTIIVGTIMMVTTWIATMIVD 32 (87)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~d 32 (87)
.....+..+.+....+.++-+
T Consensus 25 ~~~~ig~~~~~~~~~G~~~G~ 45 (67)
T PF02659_consen 25 IALIIGIFQFIMPLLGLLLGR 45 (67)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333333444444433333333
No 247
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=39.68 E-value=67 Score=17.67 Aligned_cols=46 Identities=13% Similarity=0.116 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHh-hhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIV-DRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~-d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
...........++.+.+++.. +|.++|.++.....+.....+.+.+
T Consensus 38 ~~~~~~~~i~~ls~~~GG~~a~~~~~~kG~l~G~~~Gl~y~~il~li 84 (116)
T PF12670_consen 38 ILPWLVVIIYILSVFIGGFYAGRKAGSKGWLHGLLVGLLYFLILLLI 84 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 344445556677777777655 5567777776666555544444433
No 248
>PF09584 Phageshock_PspD: Phage shock protein PspD (Phageshock_PspD); InterPro: IPR014321 Members of this entry are phage shock protein PspD, they are found in a minority of bacteria that carry the defining genes of the phage shock regulon (pspA, pspB, pspC, and pspF). It is found in Escherichia coli, Yersinia pestis, and closely related species, where it is part of the phage shock operon. It is known to be expressed but its function is unknown.
Probab=39.58 E-value=46 Score=16.73 Aligned_cols=22 Identities=23% Similarity=0.176 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHhhhhchhHHH
Q psy7928 19 IMMVTTWIATMIVDRLGRRILL 40 (87)
Q Consensus 19 ~~~~~~~~~~~l~d~~gRr~~l 40 (87)
...-..-+++|.++.++||++=
T Consensus 21 L~ygPAGiAg~~vk~VarkPLR 42 (66)
T PF09584_consen 21 LTYGPAGIAGWAVKSVARKPLR 42 (66)
T ss_pred HHhCcHHHHHHHHHHHhhccHH
Confidence 3333344567899999999854
No 249
>TIGR02979 phageshock_pspD phage shock protein PspD. Members of this family are phage shock protein PspD, found in a minority of bacteria that carry the defining genes of the phage shock regulon (pspA, pspB, pspC, and pspF). It is found in Escherichia coli, Yersinia pestis, and closely related species, where it is part of the phage shock operon. It is known to be expressed but its function is unknown.
Probab=39.43 E-value=33 Score=16.77 Aligned_cols=21 Identities=19% Similarity=0.113 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHhhhhchhHHH
Q psy7928 20 MMVTTWIATMIVDRLGRRILL 40 (87)
Q Consensus 20 ~~~~~~~~~~l~d~~gRr~~l 40 (87)
..-..-+++|.++.+.||++=
T Consensus 17 ~YGPAG~aGw~vKsVsrkPLr 37 (59)
T TIGR02979 17 RYGPAGVAGWAMKSVARRPLK 37 (59)
T ss_pred HhCchhHHHHHHHHHhhccHH
Confidence 333344567899999999754
No 250
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=38.07 E-value=70 Score=17.44 Aligned_cols=32 Identities=3% Similarity=0.069 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhhhhchhHHHHHHHHHHHHHH
Q psy7928 20 MMVTTWIATMIVDRLGRRILLLVSAVIMALST 51 (87)
Q Consensus 20 ~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~ 51 (87)
.+++..+|.|+-++++-++.+.......++..
T Consensus 56 il~G~~lG~WLD~~~~t~~~~tl~~lllGv~~ 87 (100)
T TIGR02230 56 TLLGVAVGIWLDRHYPSPFSWTLTMLIVGVVI 87 (100)
T ss_pred HHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 35556666777677876665544444444433
No 251
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=37.47 E-value=1.4e+02 Score=20.59 Aligned_cols=53 Identities=11% Similarity=0.214 Sum_probs=33.8
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhh-chhHHHHHHHHHHHHHHHHHH
Q psy7928 2 GHGVLWNPNLCTIIVGTIMMVTTWIATMIVDRL-GRRILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~-gRr~~l~~~~~~~~~~~~~~~ 55 (87)
|.+.. ++-....+....+.+.++....+.+|. .||+........+.+....+.
T Consensus 239 G~sa~-~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~ 292 (395)
T COG2807 239 GLSAA-EAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLL 292 (395)
T ss_pred CCCHH-HhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 34443 444455567788888888888888864 567766665555555544443
No 252
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=36.65 E-value=1.4e+02 Score=20.59 Aligned_cols=47 Identities=13% Similarity=0.126 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhch----hHHHHHHHHHHHHHHHHHHHH
Q psy7928 11 LCTIIVGTIMMVTTWIATMIVDRLGR----RILLLVSAVIMALSTLTMGYY 57 (87)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~d~~gR----r~~l~~~~~~~~~~~~~~~~~ 57 (87)
..+.+......+.+++..+.-+|.+| ++.+..+....++++..+...
T Consensus 320 ~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~ 370 (500)
T PRK09584 320 QYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLG 370 (500)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555555565555444455444 456667777777777766544
No 253
>PF11460 DUF3007: Protein of unknown function (DUF3007); InterPro: IPR021562 This is a family of uncharacterised proteins found in bacteria and eukaryotes.
Probab=35.80 E-value=52 Score=18.12 Aligned_cols=19 Identities=26% Similarity=0.326 Sum_probs=7.9
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q psy7928 37 RILLLVSAVIMALSTLTMG 55 (87)
Q Consensus 37 r~~l~~~~~~~~~~~~~~~ 55 (87)
...+.++.....+..+...
T Consensus 4 ~dvl~Iglgv~~~Gg~~Y~ 22 (104)
T PF11460_consen 4 IDVLLIGLGVFLLGGLLYG 22 (104)
T ss_pred cceeeecHHHHHHHHHHHH
Confidence 3344444444444433333
No 254
>KOG4830|consensus
Probab=35.71 E-value=34 Score=22.63 Aligned_cols=11 Identities=45% Similarity=0.906 Sum_probs=8.1
Q ss_pred HHhhhhchhHH
Q psy7928 29 MIVDRLGRRIL 39 (87)
Q Consensus 29 ~l~d~~gRr~~ 39 (87)
+=.||+|||+.
T Consensus 83 ~~idr~G~~~~ 93 (412)
T KOG4830|consen 83 ACIDRIGRRMS 93 (412)
T ss_pred HHhhhhcceee
Confidence 34699999873
No 255
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=35.61 E-value=1.1e+02 Score=18.79 Aligned_cols=28 Identities=14% Similarity=0.343 Sum_probs=14.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLG 35 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~g 35 (87)
++.......+++.++....+.++-+|++
T Consensus 155 ~~~~~~~~igivs~i~~~~G~~lG~~~~ 182 (206)
T TIGR02840 155 NPLATSILVAVMSFIFVSLGLFLGKKIS 182 (206)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444445555555555555555544433
No 256
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=32.98 E-value=1.7e+02 Score=20.36 Aligned_cols=38 Identities=16% Similarity=0.182 Sum_probs=27.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAV 45 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~ 45 (87)
+........-...+++=+++.++++|+..+|.+.....
T Consensus 273 ~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~ 310 (422)
T COG0738 273 QAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYAL 310 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 45555556666677888888899999988887766553
No 257
>PRK11469 hypothetical protein; Provisional
Probab=31.89 E-value=1.2e+02 Score=18.31 Aligned_cols=40 Identities=15% Similarity=0.304 Sum_probs=21.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhh----hchhHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDR----LGRRILLLVSAVIM 47 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~----~gRr~~l~~~~~~~ 47 (87)
++.......+.+.++.+..+.++-+| +|||.-++.|....
T Consensus 132 ~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI 175 (188)
T PRK11469 132 NIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLI 175 (188)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555566666667766666665553 44444444443333
No 258
>PRK10497 peripheral inner membrane phage-shock protein; Provisional
Probab=31.19 E-value=66 Score=16.50 Aligned_cols=21 Identities=19% Similarity=0.110 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHhhhhchhHHH
Q psy7928 20 MMVTTWIATMIVDRLGRRILL 40 (87)
Q Consensus 20 ~~~~~~~~~~l~d~~gRr~~l 40 (87)
..-..-++++.++.+.||++=
T Consensus 29 ~YgPAG~aG~~vKsVarkPLR 49 (73)
T PRK10497 29 RYGPAGVAGWAVKSVARKPLK 49 (73)
T ss_pred HhCchHHHHHHHHHHhhccHH
Confidence 333344567899999999854
No 259
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=30.34 E-value=17 Score=25.54 Aligned_cols=49 Identities=16% Similarity=0.169 Sum_probs=0.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q psy7928 8 NPNLCTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~ 56 (87)
++-.......+...+..++-.|.-+|-.|-|++-.|...+++..+++++
T Consensus 39 ~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~l 87 (539)
T PF03137_consen 39 QSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFAL 87 (539)
T ss_dssp -------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhc
Confidence 3334444455666666666777777777777888888888888777765
No 260
>TIGR00807 malonate_madL malonate transporter, MadL subunit. The MSS family includes the monobasic malonate:Na+ symporter of Malonomonas rubra. It consists of two integral membrane proteins, MadL and MadM. The transporter is believed to catalyze the electroneutral reversible uptake of H+-malonate with one Na+, and both subunits have been shown to be essential for activity.
Probab=30.12 E-value=95 Score=17.62 Aligned_cols=10 Identities=10% Similarity=0.335 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q psy7928 46 IMALSTLTMG 55 (87)
Q Consensus 46 ~~~~~~~~~~ 55 (87)
...++.....
T Consensus 101 av~~~~~~i~ 110 (125)
T TIGR00807 101 ALIVTVLVIR 110 (125)
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 261
>PF10518 TAT_signal: TAT (twin-arginine translocation) pathway signal sequence; InterPro: IPR019546 The twin-arginine translocation (Tat) pathway serves the role of transporting folded proteins across energy-transducing membranes []. Homologues of the genes that encode the transport apparatus occur in archaea, bacteria, chloroplasts, and plant mitochondria []. In bacteria, the Tat pathway catalyses the export of proteins from the cytoplasm across the inner/cytoplasmic membrane. In chloroplasts, the Tat components are found in the thylakoid membrane and direct the import of proteins from the stroma. The Tat pathway acts separately from the general secretory (Sec) pathway, which transports proteins in an unfolded state []. It is generally accepted that the primary role of the Tat system is to translocate fully folded proteins across membranes. An example of proteins that need to be exported in their 3D conformation are redox proteins that have acquired complex multi-atom cofactors in the bacterial cytoplasm (or the chloroplast stroma or mitochondrial matrix). They include hydrogenases, formate dehydrogenases, nitrate reductases, trimethylamine N-oxide (TMAO) reductases and dimethyl sulphoxide (DMSO) reductases [, ]. The Tat system can also export whole heteroligomeric complexes in which some proteins have no Tat signal. This is the case of the DMSO reductase or formate dehydrogenase complexes. But there are also other cases where the physiological rationale for targeting a protein to the Tat signal is less obvious. Indeed, there are examples of homologous proteins that are in some cases targeted to the Tat pathway and in other cases to the Sec apparatus. Some examples are: copper nitrite reductases, flavin domains of flavocytochrome c and N-acetylmuramoyl-L-alanine amidases []. In halophilic archaea such as Halobacterium almost all secreted proteins appear to be Tat targeted. It has been proposed to be a response to the difficulties these organisms would otherwise face in successfully folding proteins extracellularly at high ionic strength []. The Tat signal peptide consists of three motifs: the positively charged N-terminal motif, the hydrophobic region and the C-terminal region that generally ends with a consensus short motif (A-x-A) specifying cleavage by signal peptidase. Sequence analysis revealed that signal peptides capable of targeting the Tat protein contain the consensus sequence [ST]-R-R-x-F-L-K. The nearly invariant twin-arginine gave rise to the pathway's name. In addition the h-region of Tat signal peptides is typically less hydrophobic than that of Sec-specific signal peptides [, ].
Probab=29.77 E-value=49 Score=13.14 Aligned_cols=17 Identities=35% Similarity=0.304 Sum_probs=10.4
Q ss_pred hhchhHHHHHHHHHHHH
Q psy7928 33 RLGRRILLLVSAVIMAL 49 (87)
Q Consensus 33 ~~gRr~~l~~~~~~~~~ 49 (87)
++.||..+-.+......
T Consensus 1 ~~sRR~fLk~~~a~~a~ 17 (26)
T PF10518_consen 1 NLSRRQFLKGGAAAAAA 17 (26)
T ss_pred CCcHHHHHHHHHHHHHH
Confidence 45788777666554433
No 262
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=29.73 E-value=1.7e+02 Score=19.42 Aligned_cols=22 Identities=23% Similarity=0.181 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHh-hhhchhH
Q psy7928 17 GTIMMVTTWIATMIV-DRLGRRI 38 (87)
Q Consensus 17 ~~~~~~~~~~~~~l~-d~~gRr~ 38 (87)
.....+++.+..... |+.++|.
T Consensus 264 ~~~~~i~~~l~~~~~~~~~~~~~ 286 (413)
T PRK15403 264 FGAVIVANAIVARFVKDPTEPRF 286 (413)
T ss_pred HHHHHHHHHHHHHHhccCCchhH
Confidence 334445455544444 4444443
No 263
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=27.24 E-value=2.1e+02 Score=19.70 Aligned_cols=38 Identities=16% Similarity=0.146 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchhHHHHHHHHHHHH
Q psy7928 12 CTIIVGTIMMVTTWIATMIVDRLGRRILLLVSAVIMAL 49 (87)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~l~~~~~~~~~ 49 (87)
.+.+-.+..-...+.+..+.+|+|-++.+..+....++
T Consensus 52 LTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~ 89 (395)
T COG2807 52 LTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAA 89 (395)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHH
Confidence 33333444445566777888899988877666544433
No 264
>PF05232 BTP: Bacterial Transmembrane Pair family; InterPro: IPR007896 This domain represents a conserved pair of transmembrane helices. It appears to be found as two tandem repeats in a family of hypothetical proteins.
Probab=26.07 E-value=98 Score=15.38 Aligned_cols=15 Identities=0% Similarity=0.113 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHhh
Q psy7928 18 TIMMVTTWIATMIVD 32 (87)
Q Consensus 18 ~~~~~~~~~~~~l~d 32 (87)
....+..++..+..|
T Consensus 16 ~~l~~~~P~~a~~~~ 30 (67)
T PF05232_consen 16 GALLISVPLIAWWLG 30 (67)
T ss_pred HHHHHHHHHHHHHHC
Confidence 344455555555554
No 265
>PF03817 MadL: Malonate transporter MadL subunit; InterPro: IPR004690 The MSS family includes the monobasic malonate:Na+ symporter of Malonomonas rubra. It consists of two integral membrane proteins, MadL and MadM. The transporter is believed to catalyze the electroneutral reversible uptake of H+-malonate with one Na+, and both subunits have been shown to be essential for activity.
Probab=25.74 E-value=1.1e+02 Score=17.34 Aligned_cols=17 Identities=24% Similarity=0.192 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy7928 39 LLLVSAVIMALSTLTMG 55 (87)
Q Consensus 39 ~l~~~~~~~~~~~~~~~ 55 (87)
.++.+.....+++....
T Consensus 94 Allagi~av~~~~~~ip 110 (125)
T PF03817_consen 94 ALLAGIGAVAVCFLLIP 110 (125)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 33344444444444333
No 266
>PF06795 Erythrovirus_X: Erythrovirus X protein; InterPro: IPR009629 This family consists of several Erythrovirus X proteins, which seem to be found exclusively in human parvovirus and human erythrovirus. The function of this family is unknown.
Probab=24.78 E-value=1.1e+02 Score=15.36 Aligned_cols=20 Identities=25% Similarity=0.328 Sum_probs=14.8
Q ss_pred HHHHHHHhhhhchhHHHHHH
Q psy7928 24 TWIATMIVDRLGRRILLLVS 43 (87)
Q Consensus 24 ~~~~~~l~d~~gRr~~l~~~ 43 (87)
+.++..+..|.|.|+++..-
T Consensus 46 tmlgl~ms~klg~r~~l~tv 65 (81)
T PF06795_consen 46 TMLGLPMSYKLGPRRMLWTV 65 (81)
T ss_pred HHHHHHHHhhhcHHHHHHHH
Confidence 45566778899999987653
No 267
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=24.67 E-value=1.6e+02 Score=17.39 Aligned_cols=16 Identities=25% Similarity=0.553 Sum_probs=10.3
Q ss_pred HHhhhhchhHHHHHHH
Q psy7928 29 MIVDRLGRRILLLVSA 44 (87)
Q Consensus 29 ~l~d~~gRr~~l~~~~ 44 (87)
.+.||.-||-....|.
T Consensus 56 ~Vs~RM~rRm~~~~Gi 71 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGI 71 (153)
T ss_pred HHHHHHHHHHHHHhch
Confidence 3567777776666654
No 268
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=23.84 E-value=2.2e+02 Score=18.72 Aligned_cols=20 Identities=20% Similarity=0.250 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHhhhhchh
Q psy7928 18 TIMMVTTWIATMIVDRLGRR 37 (87)
Q Consensus 18 ~~~~~~~~~~~~l~d~~gRr 37 (87)
.....+.+...++.||..||
T Consensus 234 l~~~~g~~g~~~~~d~~~r~ 253 (368)
T TIGR00903 234 LAILAGLIGVAVIPDRVARA 253 (368)
T ss_pred HHHHHHHHHHHHhhHHhhhh
Confidence 33444555567788887654
No 269
>KOG2325|consensus
Probab=23.82 E-value=2.7e+02 Score=19.76 Aligned_cols=44 Identities=16% Similarity=0.106 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhch-hHHHHHHHHHHHHHHHHHHH
Q psy7928 13 TIIVGTIMMVTTWIATMIVDRLGR-RILLLVSAVIMALSTLTMGY 56 (87)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~d~~gR-r~~l~~~~~~~~~~~~~~~~ 56 (87)
.....+.+.+.+++.++=-.|-++ |+.++.+...+.+..++...
T Consensus 77 iaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~ 121 (488)
T KOG2325|consen 77 IAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLA 121 (488)
T ss_pred HHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHH
Confidence 334556667777666655666664 77777788777777776643
No 270
>PF05493 ATP_synt_H: ATP synthase subunit H ; InterPro: IPR008389 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. This entry represents subunit E (or subunit M9.2) found in the V0 complex of certain V-ATPases. The V0 complex contains subunit C (proton-conducting pore), as well as accessory subunits that function in assembly, targeting or regulation of the V-ATPase complex. Subunit E is an extremely hydrophobic protein of approximately 9 kDa, which may be required for assembly of vacuolar ATPases []. The amino terminal domain of subunit E interacts with the H subunit and is required fo V-ATPase function []. Different isoforms of this subunit exist sometimes annotated as E1 and E2 also a neuron-specific isoform, NM9.2 has been identified []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0015078 hydrogen ion transmembrane transporter activity, 0015991 ATP hydrolysis coupled proton transport, 0033179 proton-transporting V-type ATPase, V0 domain
Probab=23.76 E-value=1.1e+02 Score=15.18 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=22.8
Q ss_pred HHHHHHhhhhchhHHHHHHHHHHHHHHHHHHHHhhcc
Q psy7928 25 WIATMIVDRLGRRILLLVSAVIMALSTLTMGYYFYLK 61 (87)
Q Consensus 25 ~~~~~l~d~~gRr~~l~~~~~~~~~~~~~~~~~~~~~ 61 (87)
..+.+.+.|-..|.+.........++...+.+..+..
T Consensus 15 ~~~~~~~pkg~~~~li~~~~ilt~~CcwL~W~~~yla 51 (65)
T PF05493_consen 15 IVGPFFVPKGPNRGLIRTSLILTAVCCWLFWACTYLA 51 (65)
T ss_pred HHHheeeecCCCceeEhHHHHHHHHHHHHHHHHHHHH
Confidence 3444556665566666666666677777777665544
No 271
>COG3913 SciT Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.54 E-value=35 Score=21.17 Aligned_cols=16 Identities=56% Similarity=0.816 Sum_probs=12.1
Q ss_pred HhhhhchhHHHHHHHH
Q psy7928 30 IVDRLGRRILLLVSAV 45 (87)
Q Consensus 30 l~d~~gRr~~l~~~~~ 45 (87)
-.||+|||..+.+.+.
T Consensus 80 SaDrvgR~fPl~vaa~ 95 (227)
T COG3913 80 SADRVGRRFPLLVAAA 95 (227)
T ss_pred cchhhcccccHHHHHh
Confidence 3599999998876543
No 272
>PF01169 UPF0016: Uncharacterized protein family UPF0016; InterPro: IPR001727 A number of uncharacterised proteins share regions of similarities. These include, Saccharomyces cerevisiae (Baker's yeast) hypothetical protein YBR187w. Schizosaccharomyces pombe (Fission yeast) hypothetical protein SpAC17G8.08c. Mus musculus (Mouse) protein pFT27. Synechocystis sp. (strain PCC 6803) hypothetical protein sll0615. These are hydrophobic proteins of 200 to 320 amino acids that seem to contain six or seven transmembrane domains.; GO: 0016020 membrane
Probab=23.42 E-value=1.2e+02 Score=15.49 Aligned_cols=6 Identities=17% Similarity=0.368 Sum_probs=2.8
Q ss_pred HHhhhh
Q psy7928 29 MIVDRL 34 (87)
Q Consensus 29 ~l~d~~ 34 (87)
-+.-|.
T Consensus 23 ~La~~~ 28 (78)
T PF01169_consen 23 ALAARY 28 (78)
T ss_pred HHHhcC
Confidence 344455
No 273
>PF09716 ETRAMP: Malarial early transcribed membrane protein (ETRAMP); InterPro: IPR006389 These sequences represent a family of proteins from the malaria parasite Plasmodium falciparum, several of which have been shown to be expressed specifically in the ring stage as well as the rodent parasite Plasmodium yoelii []. A homologue from Plasmodium chabaudi was localized to the parasitophorous vacuole membrane []. Members have an initial hydrophobic, Phe/Tyr-rich stretch long enough to span the membrane, a highly charged region rich in Lys, a second putative transmembrane region, and a second highly charged, low complexity sequence region. Some members have up to 100 residues of additional C-terminal sequence. These genes have been shown to be found in the sub-telomeric regions of both Plasmodium falciparum and P. yoelii chromosomes.
Probab=22.73 E-value=1.3e+02 Score=15.65 Aligned_cols=23 Identities=13% Similarity=0.265 Sum_probs=13.6
Q ss_pred hhhchhHHHHHHHHHHHHHHHHH
Q psy7928 32 DRLGRRILLLVSAVIMALSTLTM 54 (87)
Q Consensus 32 d~~gRr~~l~~~~~~~~~~~~~~ 54 (87)
++-.||+..+++.+..++.+.+-
T Consensus 48 kK~k~kK~iiiS~i~s~lalli~ 70 (84)
T PF09716_consen 48 KKKKNKKKIIISTIASGLALLIA 70 (84)
T ss_pred HHHhccchhhHHHHHHHHHHHHH
Confidence 34456667777776666655433
No 274
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=20.81 E-value=1.1e+02 Score=14.16 Aligned_cols=30 Identities=7% Similarity=0.264 Sum_probs=18.0
Q ss_pred HHHHHHHHHHhhhhchhHHHHHHHHHHHHH
Q psy7928 21 MVTTWIATMIVDRLGRRILLLVSAVIMALS 50 (87)
Q Consensus 21 ~~~~~~~~~l~d~~gRr~~l~~~~~~~~~~ 50 (87)
..+..++-++-++++.++..........+.
T Consensus 15 ~~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 15 LVGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 445556667767788877665554444433
No 275
>KOG4006|consensus
Probab=20.60 E-value=90 Score=20.65 Aligned_cols=25 Identities=12% Similarity=0.337 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhhhhchhHHHHHHH
Q psy7928 20 MMVTTWIATMIVDRLGRRILLLVSA 44 (87)
Q Consensus 20 ~~~~~~~~~~l~d~~gRr~~l~~~~ 44 (87)
+..-+++..|+-.|+.||++=+.|.
T Consensus 6 ~valnfvisylynklprrrv~ifge 30 (311)
T KOG4006|consen 6 QVALNFVISYLYNKLPRRRVNIFGE 30 (311)
T ss_pred HHHHHHHHHHHhccCCccccchhHH
Confidence 4556777889999999999877654
No 276
>PRK11114 cellulose synthase regulator protein; Provisional
Probab=20.15 E-value=2.1e+02 Score=21.35 Aligned_cols=30 Identities=17% Similarity=0.361 Sum_probs=14.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhH
Q psy7928 9 PNLCTIIVGTIMMVTTWIATMIVDRLGRRI 38 (87)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~ 38 (87)
+....++..+..++..+....+.++.+|||
T Consensus 724 p~~l~~~~~~~~~l~~~~~~~~Lr~~~~rR 753 (756)
T PRK11114 724 PVLLALLAALSVLLLALVLWRLLRRIARRR 753 (756)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333343333333444444444566666666
Done!